BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006562
(640 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255567975|ref|XP_002524965.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
gi|223535800|gb|EEF37462.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
Length = 1101
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/608 (67%), Positives = 478/608 (78%), Gaps = 5/608 (0%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
MASAI+ R+ELAKLC+ R+WSKAIR+LDSLL+QS IQDICNRAFCYSQLELHKHVI+DC
Sbjct: 1 MASAISERVELAKLCASRDWSKAIRVLDSLLSQSCTIQDICNRAFCYSQLELHKHVIKDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
DKALQLDP LLQAYILKG AFS+LGRK++AL VW++GYEHAL QSADLKQ LELEELL
Sbjct: 61 DKALQLDPMLLQAYILKGRAFSSLGRKDDALLVWQQGYEHALRQSADLKQLLELEELLKF 120
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK-SDICDSSSQSRDVSETC 211
AKQ+R++ V+ S + + +E + N K +E S+N ++ SDI +S +S D SE C
Sbjct: 121 AKQERNIGLRDHVTES-TPMNTTEFATHTNGKSNEASKNRDQLSDISNSCRESGDGSEIC 179
Query: 212 SKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDAS 271
SK + D N D+A G S + + + H+NGK +V NH+ D SK + SRD
Sbjct: 180 SKFGGNFDAMNVIRDKAGGESPITIPECRPHMNGKSDDVCTNHDKLGDKSKLHNESRDTY 239
Query: 272 EINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKS 331
+I S D+ I N KA + + + NGTH+ DK+S DS S N + S SKS
Sbjct: 240 KICCNSGDNCAIQNYLSRKAEGDVKTDK--NGTHNFIDKIS-DSESCNVLSDTSVPSSKS 296
Query: 332 SISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQ 391
S S D+++ R KLS K D+ E +E K++KKF VTRISK+KSI+VDFRLSRGIAQ
Sbjct: 297 STISISSGDTSDIRVKLSNKTDIPNEAGDETKKSKKFSVTRISKTKSITVDFRLSRGIAQ 356
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
VNEGKYASAISIFDQIL EDP YPEALIGRGTA AFQRELEAAI+DF++AIQSNP AGEA
Sbjct: 357 VNEGKYASAISIFDQILTEDPTYPEALIGRGTAHAFQRELEAAIADFSKAIQSNPLAGEA 416
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
WKRRGQARAALGES+EAI DL+KALEFEPNSADILHERGIVNFKFKDF+AAV+DLSACVK
Sbjct: 417 WKRRGQARAALGESIEAIHDLTKALEFEPNSADILHERGIVNFKFKDFDAAVQDLSACVK 476
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
LDK+NKSAYTYLGLALSS GEYKKAEEAHLK+IQLDR+FLE W HLTQFYQDLAN KA
Sbjct: 477 LDKDNKSAYTYLGLALSSTGEYKKAEEAHLKSIQLDRSFLEGWAHLTQFYQDLANLTKAF 536
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
EC++QVL ID RF+KAYHL GLLLHG+G+H+KAIK+LS GL I+ SNIECLYLRASCYHA
Sbjct: 537 ECIKQVLQIDARFAKAYHLHGLLLHGMGEHRKAIKELSLGLSIENSNIECLYLRASCYHA 596
Query: 632 IGEYREAV 639
IGEY EAV
Sbjct: 597 IGEYGEAV 604
>gi|225438920|ref|XP_002279290.1| PREDICTED: tetratricopeptide repeat protein 13-like [Vitis
vinifera]
Length = 1068
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/609 (65%), Positives = 471/609 (77%), Gaps = 37/609 (6%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
M SAI+ R ELAKLCS R+WSKAIR+LDSLLAQS IQDICNRAFCYS+LELHKHVIRDC
Sbjct: 1 MESAISERQELAKLCSCRDWSKAIRVLDSLLAQSCVIQDICNRAFCYSKLELHKHVIRDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
DKALQL+PTLLQAYILKG A SALG+KE+AL VWE+GY HA+ QSADLKQFLELEELL
Sbjct: 61 DKALQLEPTLLQAYILKGHALSALGKKEDALLVWEQGYGHAVRQSADLKQFLELEELL-- 118
Query: 153 AKQDRSVTCE-YDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETC 211
KQ+R +TCE + + + SS++VSES L+ N+K + T +N +K + D SE C
Sbjct: 119 -KQNRRITCENHAMESPESSISVSESALHVNEKPNSTHKNDSKLN---------DESELC 168
Query: 212 SKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDAS 271
S+SS + I+ K +N + +D S+ S D S
Sbjct: 169 SESSDTSE-----------------------IHCKPNSTHKNDSKLNDESELCSESSDTS 205
Query: 272 EINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKS 331
EI+ ++ D D + D + NE+ ++NGT+D+ K S +S ++ N SE SKS
Sbjct: 206 EIHCKAFDTSDGHDELRDTVNGNEKLNSESNGTYDIFVKSSDESELCSELNDTSEQSSKS 265
Query: 332 SIS-DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIA 390
S+ +KSSD +E R K S K+D+ E +EA RNKKFCVTRISK+KSISVDFRLSRGIA
Sbjct: 266 SVVIHSKSSDISEVRRKSSNKYDIRSELGDEANRNKKFCVTRISKTKSISVDFRLSRGIA 325
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
QVNEG Y++AISIFDQILKEDP YPEAL+GRGTA AFQREL +AI+DFT+AI+SNPSA E
Sbjct: 326 QVNEGNYSNAISIFDQILKEDPTYPEALVGRGTAYAFQRELSSAIADFTKAIESNPSACE 385
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
AWKRRGQARAALGES EAI+DL+KALEFEPNS DILHERGIVNFKFKDFNAAVEDLSACV
Sbjct: 386 AWKRRGQARAALGESSEAIEDLTKALEFEPNSTDILHERGIVNFKFKDFNAAVEDLSACV 445
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+LDKENKSAYTYLGLALSSIGEYK+AEEAH+K+IQLD+NFLE W HLTQFYQDLAN KA
Sbjct: 446 QLDKENKSAYTYLGLALSSIGEYKRAEEAHMKSIQLDQNFLEGWAHLTQFYQDLANPTKA 505
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
LEC+++VL ID+ F+KAYHLRGLL HG+G+HKKAI DLS GLGI+ SNIECLYLRASCYH
Sbjct: 506 LECIERVLQIDEGFAKAYHLRGLLRHGMGEHKKAITDLSIGLGIENSNIECLYLRASCYH 565
Query: 631 AIGEYREAV 639
AIGEY EA+
Sbjct: 566 AIGEYGEAI 574
>gi|449448472|ref|XP_004141990.1| PREDICTED: tetratricopeptide repeat protein 13-like [Cucumis
sativus]
Length = 1046
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/610 (59%), Positives = 435/610 (71%), Gaps = 66/610 (10%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
MA AI+ R+ELAK C ++WSKAIR+LDSL+A+S +QDICNRAFCYSQLELHKHVI+DC
Sbjct: 1 MAPAISERVELAKFCRSKDWSKAIRVLDSLIAKSCTVQDICNRAFCYSQLELHKHVIKDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
D+ALQLDP++LQAY+LKG A+ ALG++ +ALS+WE+GY++AL Q+ DLKQ LELEEL+T
Sbjct: 61 DRALQLDPSILQAYVLKGQAYFALGKRGDALSIWERGYQYALCQTTDLKQLLELEELMTR 120
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCS 212
KQ+++ +V + S++ ESG+ + +S R+ +
Sbjct: 121 EKQEKNNVENGEVESGFSTVG-PESGVTS------------------ASKNCRETNNNVG 161
Query: 213 KSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASE 272
K PD C S D+SE
Sbjct: 162 KLMEHPDFC-------------------------------------------MKSSDSSE 178
Query: 273 INRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESY---S 329
+ SSD+ +C G ++ N ++NG D D+LS D++ L+D ++ + S
Sbjct: 179 VCSISSDNLVVCEGGCEEVGPNRDIKCESNGCTDNDDRLS-DASKLHDLRSDMPEFCNKS 237
Query: 330 KSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGI 389
K + +KS DST+ SK S D+ S+EA+R KKF V +ISK+KSISVDFRLSRGI
Sbjct: 238 KLTAFHSKSGDSTDILSKSSKTSDVRGNVSDEARRTKKFSVAKISKTKSISVDFRLSRGI 297
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A+VNEGKYA+AISIFDQILKEDP YPEALIGRGTA AFQREL+AAISDFT+A++SNP AG
Sbjct: 298 AEVNEGKYANAISIFDQILKEDPSYPEALIGRGTAYAFQRELDAAISDFTKALESNPFAG 357
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
EAWKRRGQARAALG S EAI+DL+KALE EPNSADILHERGIVNFKFKDF AAVEDLS C
Sbjct: 358 EAWKRRGQARAALGASAEAIEDLTKALELEPNSADILHERGIVNFKFKDFYAAVEDLSEC 417
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+KLD N SAYTYLGLALSSIG+YK+AEEAHLK+IQLDRNFLEAWGHLTQFYQDLANS K
Sbjct: 418 LKLDGCNTSAYTYLGLALSSIGDYKRAEEAHLKSIQLDRNFLEAWGHLTQFYQDLANSTK 477
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
ALECL QVL ID F KAYHLRGLL HG+G+H+KAIKDLS GL I+ +NIECLYLRASCY
Sbjct: 478 ALECLHQVLQIDSTFGKAYHLRGLLYHGMGEHRKAIKDLSIGLKIENANIECLYLRASCY 537
Query: 630 HAIGEYREAV 639
HAIGEY AV
Sbjct: 538 HAIGEYGLAV 547
>gi|449520722|ref|XP_004167382.1| PREDICTED: tetratricopeptide repeat protein 13-like [Cucumis
sativus]
Length = 1046
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/610 (59%), Positives = 435/610 (71%), Gaps = 66/610 (10%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
MA AI+ R+ELAK C ++WSKAIR+LDSL+A+S +QDICNRAFCYSQLELHKHVI+DC
Sbjct: 1 MAPAISERVELAKFCRSKDWSKAIRVLDSLIAKSCTVQDICNRAFCYSQLELHKHVIKDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
D+ALQLDP++LQAY+LKG A+ ALG++ +ALS+WE+GY++AL Q+ DLKQ LELEEL+T
Sbjct: 61 DRALQLDPSILQAYVLKGQAYFALGKRGDALSIWERGYQYALCQTTDLKQLLELEELMTR 120
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCS 212
KQ+++ +V + S++ ESG+ + +S R+ +
Sbjct: 121 EKQEKNNVENGEVESRFSAVG-PESGVTS------------------ASKNCRETNNNVG 161
Query: 213 KSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASE 272
K PD C S D+SE
Sbjct: 162 KLMEHPDFC-------------------------------------------MKSSDSSE 178
Query: 273 INRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESY---S 329
+ SSD+ +C G ++ N ++NG D D+LS D++ L+D ++ + S
Sbjct: 179 VCSISSDNLVVCEGGCEEVGPNRDIKCESNGCTDNDDRLS-DASKLHDLRSDMPEFCNKS 237
Query: 330 KSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGI 389
K + +KS DST+ SK S D+ S+EA+R KKF V +ISK+KSISVDFRLSRGI
Sbjct: 238 KLTAFHSKSGDSTDILSKSSKTSDVRGNVSDEARRTKKFSVAKISKTKSISVDFRLSRGI 297
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A+VNEGKYA+AISIFDQILKEDP YPEALIGRGTA AFQREL+AAISDFT+A++SNP AG
Sbjct: 298 AEVNEGKYANAISIFDQILKEDPSYPEALIGRGTAYAFQRELDAAISDFTKALESNPFAG 357
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
EAWKRRGQARAALG S EAI+DL+KALE EPNSADILHERGIVNFKFKDF AAVEDLS C
Sbjct: 358 EAWKRRGQARAALGASAEAIEDLTKALELEPNSADILHERGIVNFKFKDFYAAVEDLSEC 417
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+KLD N SAYTYLGLALSSIG+YK+AEEAHLK+IQLDRNFLEAWGHLTQFYQDLANS K
Sbjct: 418 LKLDGCNTSAYTYLGLALSSIGDYKRAEEAHLKSIQLDRNFLEAWGHLTQFYQDLANSTK 477
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
ALECL QVL ID F KAYHLRGLL HG+G+H+KAIKDLS GL I+ +NIECLYLRASCY
Sbjct: 478 ALECLHQVLQIDSTFGKAYHLRGLLYHGMGEHRKAIKDLSIGLKIENANIECLYLRASCY 537
Query: 630 HAIGEYREAV 639
HAIGEY AV
Sbjct: 538 HAIGEYGLAV 547
>gi|356565517|ref|XP_003550986.1| PREDICTED: tetratricopeptide repeat protein 13-like [Glycine max]
Length = 1042
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/611 (59%), Positives = 434/611 (71%), Gaps = 72/611 (11%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
MA A + R+ELA+LC+ ++WSKAIRILDSL++ S IQD+CNRAFCYS+LELHKHVI+DC
Sbjct: 1 MAPATSERVELARLCASKDWSKAIRILDSLVSHSNAIQDLCNRAFCYSKLELHKHVIKDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
D+ALQLDPTLLQAYILKG A S LGRKE AL VWE+GYEHALHQSADLKQ LELEEL+
Sbjct: 61 DRALQLDPTLLQAYILKGSALSVLGRKENALLVWEQGYEHALHQSADLKQLLELEELIAT 120
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHN----KSDICDSSSQSRDVS 208
AKQ + CE S + SL ++S +N SET + + ++++C ++ D S
Sbjct: 121 AKQGNNTLCE---SETHRSLPQTKSVSLSNGSSSETCKIQDTLGTRAELCGDATG--DKS 175
Query: 209 ETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASR 268
ETC KS+ + +L + DE RE S +G +GS
Sbjct: 176 ETCLKSADNSNLKHESHDE-------------------YRE-SNKSDGQVNGSPDV---L 212
Query: 269 DASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESY 328
D N +S +D + DK S N S DSA++ N
Sbjct: 213 DTLSYNSESCNDSSDASESSDKVSTN-----------------SGDSANVPKIFRN--PI 253
Query: 329 SKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRG 388
SK SD + + A++NKKFCV RIS + SISVDFRLSRG
Sbjct: 254 SKFIFSDERKGE---------------------ARKNKKFCVARISNTNSISVDFRLSRG 292
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
IA+VNEGKYA AISIFDQILK+DP YPEALIGRGTA AFQREL+AAI+DFT+AIQ NP A
Sbjct: 293 IAEVNEGKYAHAISIFDQILKKDPAYPEALIGRGTAYAFQRELDAAIADFTKAIQFNPLA 352
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
GEAWKRRGQARAALGE VEAI+DL+KALEFEP++ADILHERGIVNFKFK+F+AAVEDLSA
Sbjct: 353 GEAWKRRGQARAALGEFVEAIEDLTKALEFEPDTADILHERGIVNFKFKEFDAAVEDLSA 412
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
CVKLDK+N SAYTYLGLALSSIGEYK+AEEAHLK++QLD+NFLEAW HLTQFYQDLA
Sbjct: 413 CVKLDKDNTSAYTYLGLALSSIGEYKEAEEAHLKSLQLDKNFLEAWAHLTQFYQDLAKPT 472
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
KA EC+ ++L+ID RF++AYHLRGLL H +G+H+KAIKDL+ GL ID SNIECLYLRASC
Sbjct: 473 KAQECINRMLHIDGRFARAYHLRGLLFHAMGEHRKAIKDLTMGLSIDGSNIECLYLRASC 532
Query: 629 YHAIGEYREAV 639
YHA+G+Y+EAV
Sbjct: 533 YHAVGQYKEAV 543
>gi|224071273|ref|XP_002303385.1| predicted protein [Populus trichocarpa]
gi|222840817|gb|EEE78364.1| predicted protein [Populus trichocarpa]
Length = 526
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/529 (67%), Positives = 412/529 (77%), Gaps = 4/529 (0%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
MASAI+ R+ELAKLCS R+WSKAIR+LDSLL QS IQDICNRAFCYSQLELHKHVI+DC
Sbjct: 1 MASAISERVELAKLCSSRDWSKAIRVLDSLLVQSCAIQDICNRAFCYSQLELHKHVIKDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
D+ALQLDPTLLQAYILKG AFS+LGRK++AL VWE+GYEHALHQSADLKQ LELEELL
Sbjct: 61 DRALQLDPTLLQAYILKGRAFSSLGRKDDALLVWEQGYEHALHQSADLKQLLELEELLKF 120
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK-SDICDSSSQSRDVSETC 211
AKQDRS CE V S S+ SES + K ETS++ NK SDI + S SR+V
Sbjct: 121 AKQDRSAGCETHVVESRLSMYASES--QPHSKSDETSKHQNKLSDISNLCSGSRNVLGIH 178
Query: 212 SKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDAS 271
SKS + ++ G SDE G S V +SG H N K E S+N + +SD S+ RDA
Sbjct: 179 SKSGDNFEIHKGISDEV-GRSLKLVPESGCHTNEKSSETSKNPSKASDKSELCSELRDAP 237
Query: 272 EINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKS 331
EI +S D+FD+ NG DKA N++ G N HD+ D + S S + + SE S+
Sbjct: 238 EICCKSGDNFDMDNGLSDKAEGNQKPGILVNDNHDILDLPNHVSESCSGVSNASELSSRL 297
Query: 332 SISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQ 391
S+ D++E SK S K +M E ++E K NKK CVTRISK+KSISVDFRLSRGIAQ
Sbjct: 298 SMIPGNLGDTSEILSKSSNKVNMHNEVTDETKGNKKLCVTRISKTKSISVDFRLSRGIAQ 357
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
VNEGKYA+AISIFDQILKEDP YPEALIGRGTARAF+REL +AI+DF++AI+SNPSAGEA
Sbjct: 358 VNEGKYATAISIFDQILKEDPTYPEALIGRGTARAFKRELGSAIADFSKAIESNPSAGEA 417
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
WKRRGQARAALGES EAI DL+KALEFEPNSADILHERGIV++KFKDF+AAVEDLSACVK
Sbjct: 418 WKRRGQARAALGESAEAINDLTKALEFEPNSADILHERGIVSYKFKDFDAAVEDLSACVK 477
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
LD +N SAYTYLGLALSSIGEYKKAEEAHLKAIQLDR+FLEAW HLTQF
Sbjct: 478 LDMDNMSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRSFLEAWAHLTQF 526
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
S D RGI + A+ +K D A G A + E A
Sbjct: 346 SVDFRLSRGIAQVNEGKYATAISIFDQILKEDPTYPEALIGRGTARAFKRELGSAIADFS 405
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+ + + EAW Q L S +A+ L + L + + H RG++ +
Sbjct: 406 KAIESNPSAGEAWKRRGQARAALGESAEAINDLTKALEFEPNSADILHERGIVSYKFKDF 465
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
A++DLS+ + +D N+ +IGEY++A
Sbjct: 466 DAAVEDLSACVKLDMDNMSAYTYLGLALSSIGEYKKA 502
>gi|356514306|ref|XP_003525847.1| PREDICTED: tetratricopeptide repeat protein 13-like [Glycine max]
Length = 1050
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 354/607 (58%), Positives = 421/607 (69%), Gaps = 78/607 (12%)
Query: 40 RIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLD 99
R++LA+LC+ ++WSKAIR+LDSL++ S IQD+CNRAFCYS+LELHKHVIRDCD+ALQLD
Sbjct: 16 RVDLARLCASKDWSKAIRVLDSLISHSNAIQDLCNRAFCYSKLELHKHVIRDCDRALQLD 75
Query: 100 PTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSV 159
PT LQAYILKG A S LGR+E AL VWE+GYEHALHQSADLKQ LELEEL+ AKQ ++
Sbjct: 76 PTRLQAYILKGSALSVLGRQENALLVWEQGYEHALHQSADLKQLLELEELIETAKQGKNT 135
Query: 160 TCEYD-------VSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCS 212
CE + + S S L D + +E +C ++ D SETC
Sbjct: 136 LCESENHRPPPQTKSDSLSNGSSSETLKIQDTLGTPAE------LCGDATG--DKSETCL 187
Query: 213 KSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASE 272
S+ + DL + DE + +KS +NG
Sbjct: 188 NSADNSDLKHESHDEDRDS-----NKSDGQVNG--------------------------- 215
Query: 273 INRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSS 332
S D DI LS +S S NDS+ SES K S
Sbjct: 216 ----SPDVLDI---------------------------LSYNSESCNDSSDASESSEKVS 244
Query: 333 ISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQV 392
+ SS+ E K+ E EA++NKKFC+ +IS + SISVDFRLSRGIA+V
Sbjct: 245 TNSGDSSNIPEIFRNPISKFIFSDERKGEARKNKKFCIAQISNTNSISVDFRLSRGIAEV 304
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
NEGKYA AISIFDQILK+DP YPEALIGRGTA AFQREL+AAI+DFT+AIQ NP AGEAW
Sbjct: 305 NEGKYAHAISIFDQILKKDPAYPEALIGRGTAYAFQRELDAAIADFTKAIQFNPLAGEAW 364
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
KRRGQARAALGE VEAI+DL+KALEFEP++ADILHERGIVNFKFK+F+AAVEDLSACVKL
Sbjct: 365 KRRGQARAALGEFVEAIEDLTKALEFEPDTADILHERGIVNFKFKEFDAAVEDLSACVKL 424
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
DK+N SAYTYLGLALSSIGEYKKAEEAHLK++QLD+NFLEAW HLTQFYQDLA KA E
Sbjct: 425 DKDNTSAYTYLGLALSSIGEYKKAEEAHLKSLQLDKNFLEAWAHLTQFYQDLAKPTKAQE 484
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
C+ ++L ID RF++A HLRGLL H +G+H+KAIKDL+ GL ID SNIECLYLRASCYHA+
Sbjct: 485 CINKMLQIDGRFARANHLRGLLFHAMGEHRKAIKDLTMGLSIDGSNIECLYLRASCYHAV 544
Query: 633 GEYREAV 639
G+Y+EAV
Sbjct: 545 GQYKEAV 551
>gi|356496945|ref|XP_003517325.1| PREDICTED: tetratricopeptide repeat protein 13-like [Glycine max]
Length = 1047
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 355/617 (57%), Positives = 428/617 (69%), Gaps = 81/617 (13%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
MA + R LA+LCS ++WSKAIR+LDSL++QS IQDICNRAFCYS+LELHKHVI+DC
Sbjct: 1 MAPTTSQRATLARLCSSKDWSKAIRVLDSLVSQSGAIQDICNRAFCYSRLELHKHVIKDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
+KALQLDP+ LQAYILKG A SALGRK +AL VWE+GYEHA HQSADLK LELEELLT
Sbjct: 61 NKALQLDPSRLQAYILKGHALSALGRKTDALLVWEQGYEHAQHQSADLKLLLELEELLTT 120
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK----SDICDSSSQSRDVS 208
KQ S E + S ++ SES ++ ++E EN ++ ++CD++S D S
Sbjct: 121 TKQGNSALYE----TNGSPVSQSESDSPSDGNLTEICENQDRLSVQDELCDNAS---DKS 173
Query: 209 ETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHING------KLREVSENHNGSSDGSK 262
KS+ + DL N + E + +KS +NG KL SE+ N SSD S+
Sbjct: 174 LILLKSADNFDLRNELNIEDRES-----NKSDSQVNGSPDVIDKLSYNSESCNDSSDTSE 228
Query: 263 STHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSN 322
S + + SSD D+ ++ KLS
Sbjct: 229 SCDKDKVFTNSGESSSDSLDVA---------------------EILRKLS---------- 257
Query: 323 TNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVD 382
SK +F E EA++N KFCV RISK+KSISVD
Sbjct: 258 -----------------------SKFNFP----HEKIGEARKN-KFCVARISKTKSISVD 289
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
FRLSRGI +VNEGKYA AISIFDQILKEDP YPEALIGRGTA AF+REL+AAI+DF++AI
Sbjct: 290 FRLSRGIGEVNEGKYAHAISIFDQILKEDPAYPEALIGRGTAYAFKRELDAAIADFSKAI 349
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NPSAGEAWKRRGQARAALGE VEAI+DL+ ALEFE NSADILHERGIVNFKFK+F+AA
Sbjct: 350 EFNPSAGEAWKRRGQARAALGEFVEAIEDLTMALEFESNSADILHERGIVNFKFKEFDAA 409
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
VEDLSACV+LD++NKSAYTYLGLALSSIGEYKKAEEAHLK++Q+DRNFLEAW HLTQFYQ
Sbjct: 410 VEDLSACVQLDRDNKSAYTYLGLALSSIGEYKKAEEAHLKSLQIDRNFLEAWAHLTQFYQ 469
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
DL+ KA ECL Q+L ID RF++AYHLRGLL H +G+H+KAI DL+ L +D +N+ECL
Sbjct: 470 DLSKPTKAQECLNQMLQIDGRFARAYHLRGLLFHAMGEHRKAISDLTMSLNVDGANVECL 529
Query: 623 YLRASCYHAIGEYREAV 639
YLR SCYHA+G Y+EAV
Sbjct: 530 YLRGSCYHAVGRYKEAV 546
>gi|297798124|ref|XP_002866946.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp.
lyrata]
gi|297312782|gb|EFH43205.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp.
lyrata]
Length = 1043
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 342/616 (55%), Positives = 421/616 (68%), Gaps = 80/616 (12%)
Query: 33 MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
MA+A + R+ELAK CS RNWSKAIR+LDSLLA+ I DICNRAFCY+QLELHKHVI+DC
Sbjct: 1 MATATSERVELAKHCSSRNWSKAIRVLDSLLAKQSSILDICNRAFCYNQLELHKHVIKDC 60
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
DKAL L+P +QA+ILKG A ALGRK+EA+ V E+GY++AL Q+AD+KQ LELEELLT
Sbjct: 61 DKALLLEPCAIQAFILKGRALLALGRKQEAVLVLEQGYKNALQQTADVKQLLELEELLTD 120
Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCS 212
A++ E D + S S S +D+ ++ +NH S CS
Sbjct: 121 ARR------EIDATESRQETPASHS--EKSDEKTDKLDNHE--------------SGACS 158
Query: 213 KSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASE 272
NG S H + RE+ E SK S+D S+
Sbjct: 159 ---------NGNS----------------HDHEASRELGEK-------SKIISFSKDTSK 186
Query: 273 INRQSSDDFDICNGPIDKASVNERHGRQTNGTH---------DVHDKLSSDSASLNDSNT 323
++QS D+CNG K N + G Q NG++ D+HD L+ S L D +
Sbjct: 187 ASKQSDGSSDLCNGSAYKEKENGKCGSQINGSYESCKPCNGSDLHDNLAESSDRLGDLSI 246
Query: 324 NSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF 383
N +K I +K S E+R +E ++NKK+ + RIS + SISVDF
Sbjct: 247 NG---NKLIIKSSKMSHKAEARC-------------DETRKNKKYTIARISGTHSISVDF 290
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
RLSRGIAQVNEG Y AISIFD++LKE+P YPEALIGRGTA AFQRELE+AI+DFT+AIQ
Sbjct: 291 RLSRGIAQVNEGNYMKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQ 350
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
SNP+A EAWKRRGQARAALGE VEA++DL+KAL FEPNS D+LHERGIVNFK KDF AAV
Sbjct: 351 SNPAATEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAV 410
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+DLS C+K +K+NKSAYTYLGLA +S+GEYKKAEEAHLK+IQLD N+LEAW HL QFYQ+
Sbjct: 411 KDLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQE 470
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
LA+ KALEC++QVL +D R KAYHLRGL+ HGLG+H+KAI++LS GL I+ + IECLY
Sbjct: 471 LADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIGLSIE-NTIECLY 529
Query: 624 LRASCYHAIGEYREAV 639
LR SCYHAIGEYR+AV
Sbjct: 530 LRGSCYHAIGEYRDAV 545
>gi|4468812|emb|CAB38213.1| putative protein [Arabidopsis thaliana]
gi|7270728|emb|CAB80411.1| putative protein [Arabidopsis thaliana]
Length = 1013
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 338/615 (54%), Positives = 422/615 (68%), Gaps = 73/615 (11%)
Query: 34 ASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCD 93
A+A + R ELAK CS RNWSKAIR+LDSLLA+ I DICNRAFCY+QLELHKHVI+DCD
Sbjct: 4 ATATSERFELAKHCSSRNWSKAIRVLDSLLAKESSILDICNRAFCYNQLELHKHVIKDCD 63
Query: 94 KALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAA 153
KAL L+P +QA+ILKG A ALGRK+EA+ V E+GY+ AL Q+AD+KQ LELEELL A
Sbjct: 64 KALLLEPFAIQAFILKGRALLALGRKQEAVLVLEQGYKSALQQTADVKQLLELEELLKDA 123
Query: 154 KQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSK 213
+++ + + S +A + ET H S+ D S D E+ +
Sbjct: 124 RRE--------IDGILKS--------HATESPQETPAYH--SEKSDEKSDKLDNHESGAS 165
Query: 214 SSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEI 273
S NG S E+ E+ E SK S+ AS+
Sbjct: 166 S-------NGNSHESSS------------------ELGEQ-------SKIVSFSKVASKA 193
Query: 274 NRQSSDDFDICNGPIDKASVNERHGRQTNGTH---------DVHDKLSSDSASLNDSNTN 324
++QS + D+CNG + K N + G Q NG + D+HD L+ S + + N
Sbjct: 194 SKQSDGNSDLCNGSVYKEKENGKCGSQINGYYESCKPCNGSDLHDNLAESSDRFGELSIN 253
Query: 325 SESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
+K SI +K S E+R +S +E+++NKK+ + RIS + SISVDFR
Sbjct: 254 G---NKISIKSSKMSHKAEARCGIS----------DESRKNKKYTIARISGTHSISVDFR 300
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSRGIAQVNEG Y AISIFD++LKE+P YPEALIGRGTA AFQRELE+AI+DFT+AIQS
Sbjct: 301 LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQS 360
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+A EAWKRRGQARAALGE VEA++DL+KAL FEPNS D+LHERGIVNFK KDF AAV+
Sbjct: 361 NPAASEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAVK 420
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DLS C+K +K+NKSAYTYLGLA +S+GEYKKAEEAHLK+IQLD N+LEAW HL QFYQ+L
Sbjct: 421 DLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQEL 480
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
A+ KALEC++QVL +D R KAYHLRGL+ HGLG+H+KAI++LS GL I+ + IECLYL
Sbjct: 481 ADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIGLSIE-NTIECLYL 539
Query: 625 RASCYHAIGEYREAV 639
R SCYHA+GEYR+AV
Sbjct: 540 RGSCYHAVGEYRDAV 554
>gi|186517170|ref|NP_195462.3| suppressor of RPS4-RLD 1 / tetratricopeptide repeat
domain-containing protein [Arabidopsis thaliana]
gi|332661397|gb|AEE86797.1| suppressor of RPS4-RLD 1 / tetratricopeptide repeat
domain-containing protein [Arabidopsis thaliana]
Length = 1052
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 338/615 (54%), Positives = 422/615 (68%), Gaps = 73/615 (11%)
Query: 34 ASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCD 93
A+A + R ELAK CS RNWSKAIR+LDSLLA+ I DICNRAFCY+QLELHKHVI+DCD
Sbjct: 4 ATATSERFELAKHCSSRNWSKAIRVLDSLLAKESSILDICNRAFCYNQLELHKHVIKDCD 63
Query: 94 KALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAA 153
KAL L+P +QA+ILKG A ALGRK+EA+ V E+GY+ AL Q+AD+KQ LELEELL A
Sbjct: 64 KALLLEPFAIQAFILKGRALLALGRKQEAVLVLEQGYKSALQQTADVKQLLELEELLKDA 123
Query: 154 KQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSK 213
+++ + + S +A + ET H S+ D S D E+ +
Sbjct: 124 RRE--------IDGILKS--------HATESPQETPAYH--SEKSDEKSDKLDNHESGAS 165
Query: 214 SSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEI 273
S NG S E+ E+ E SK S+ AS+
Sbjct: 166 S-------NGNSHESSS------------------ELGEQ-------SKIVSFSKVASKA 193
Query: 274 NRQSSDDFDICNGPIDKASVNERHGRQTNGTH---------DVHDKLSSDSASLNDSNTN 324
++QS + D+CNG + K N + G Q NG + D+HD L+ S + + N
Sbjct: 194 SKQSDGNSDLCNGSVYKEKENGKCGSQINGYYESCKPCNGSDLHDNLAESSDRFGELSIN 253
Query: 325 SESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
+K SI +K S E+R +S +E+++NKK+ + RIS + SISVDFR
Sbjct: 254 G---NKISIKSSKMSHKAEARCGIS----------DESRKNKKYTIARISGTHSISVDFR 300
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSRGIAQVNEG Y AISIFD++LKE+P YPEALIGRGTA AFQRELE+AI+DFT+AIQS
Sbjct: 301 LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQS 360
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+A EAWKRRGQARAALGE VEA++DL+KAL FEPNS D+LHERGIVNFK KDF AAV+
Sbjct: 361 NPAASEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAVK 420
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DLS C+K +K+NKSAYTYLGLA +S+GEYKKAEEAHLK+IQLD N+LEAW HL QFYQ+L
Sbjct: 421 DLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQEL 480
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
A+ KALEC++QVL +D R KAYHLRGL+ HGLG+H+KAI++LS GL I+ + IECLYL
Sbjct: 481 ADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIGLSIE-NTIECLYL 539
Query: 625 RASCYHAIGEYREAV 639
R SCYHA+GEYR+AV
Sbjct: 540 RGSCYHAVGEYRDAV 554
>gi|26449774|dbj|BAC42010.1| unknown protein [Arabidopsis thaliana]
gi|29029044|gb|AAO64901.1| At4g37460 [Arabidopsis thaliana]
Length = 883
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 338/615 (54%), Positives = 422/615 (68%), Gaps = 73/615 (11%)
Query: 34 ASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCD 93
A+A + R ELAK CS RNWSKAIR+LDSLLA+ I DICNRAFCY+QLELHKHVI+DCD
Sbjct: 4 ATATSERFELAKHCSSRNWSKAIRVLDSLLAKESSILDICNRAFCYNQLELHKHVIKDCD 63
Query: 94 KALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAA 153
KAL L+P +QA+ILKG A ALGRK+EA+ V E+GY+ AL Q+AD+KQ LELEELL A
Sbjct: 64 KALLLEPFAIQAFILKGRALLALGRKQEAVLVLEQGYKSALQQTADVKQLLELEELLKDA 123
Query: 154 KQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSK 213
+++ + + S +A + ET H S+ D S D E+ +
Sbjct: 124 RRE--------IDGILKS--------HATESPQETPAYH--SEKSDEKSDKLDNHESGAS 165
Query: 214 SSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEI 273
S NG S E+ E+ E SK S+ AS+
Sbjct: 166 S-------NGNSHESSS------------------ELGEQ-------SKIVSFSKVASKA 193
Query: 274 NRQSSDDFDICNGPIDKASVNERHGRQTNGTH---------DVHDKLSSDSASLNDSNTN 324
++QS + D+CNG + K N + G Q NG + D+HD L+ S + + N
Sbjct: 194 SKQSDGNSDLCNGSVYKEKENGKCGSQINGYYESCKPCNGSDLHDNLAESSDRFGELSIN 253
Query: 325 SESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
+K SI +K S E+R +S +E+++NKK+ + RIS + SISVDFR
Sbjct: 254 G---NKISIKSSKMSHKAEARCGIS----------DESRKNKKYTIARISGTHSISVDFR 300
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSRGIAQVNEG Y AISIFD++LKE+P YPEALIGRGTA AFQRELE+AI+DFT+AIQS
Sbjct: 301 LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQS 360
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+A EAWKRRGQARAALGE VEA++DL+KAL FEPNS D+LHERGIVNFK KDF AAV+
Sbjct: 361 NPAASEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAVK 420
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DLS C+K +K+NKSAYTYLGLA +S+GEYKKAEEAHLK+IQLD N+LEAW HL QFYQ+L
Sbjct: 421 DLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQEL 480
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
A+ KALEC++QVL +D R KAYHLRGL+ HGLG+H+KAI++LS GL I+ + IECLYL
Sbjct: 481 ADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIGLSIE-NTIECLYL 539
Query: 625 RASCYHAIGEYREAV 639
R SCYHA+GEYR+AV
Sbjct: 540 RGSCYHAVGEYRDAV 554
>gi|147795382|emb|CAN74233.1| hypothetical protein VITISV_040224 [Vitis vinifera]
Length = 527
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 319/532 (59%), Positives = 381/532 (71%), Gaps = 61/532 (11%)
Query: 109 KGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCE-YDVSN 167
+G A SALG+KE+AL VWE+GY HA+ QSADLKQFLELEELL KQ+R +TCE + + +
Sbjct: 18 QGHALSALGKKEDALLVWEQGYGHAVRQSADLKQFLELEELL---KQNRRITCENHAMES 74
Query: 168 SMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDE 227
SS++VSES L+ N+K + T +N +K + D SE CS+SS
Sbjct: 75 PESSISVSESALHVNEKPNSTHKNDSKLN---------DESELCSESS------------ 113
Query: 228 AKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGP 287
+ SE H + K+ D SE+ +SSD +I
Sbjct: 114 ---------------------DTSEIHCKPNSTHKNDSKLNDESELCSESSDTSEIHCKA 152
Query: 288 IDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSK 347
D T D HD+L D+ + N+ + + + +S+ + S S R K
Sbjct: 153 FD--------------TSDGHDEL-RDTVNGNEKLNSESNGTMTSLLNQVMSLSYVVRRK 197
Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQI 407
S K+D+ E +EA RNKKFCVTRISK+KSISVDFRLSRGIAQVNEG Y++AISIFDQI
Sbjct: 198 SSNKYDIRSELGDEANRNKKFCVTRISKTKSISVDFRLSRGIAQVNEGNYSNAISIFDQI 257
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
LKEDP YPEAL+GRGTA AFQREL +AI+DFT+AI+SNPSA EAWKRRGQARAALGES E
Sbjct: 258 LKEDPTYPEALVGRGTAYAFQRELSSAIADFTKAIESNPSACEAWKRRGQARAALGESSE 317
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI+DL+KALEFEPNS DILHERGIVNFKFKDFNAAVEDLSACV+LDKENKSAYTYLGLAL
Sbjct: 318 AIEDLTKALEFEPNSTDILHERGIVNFKFKDFNAAVEDLSACVQLDKENKSAYTYLGLAL 377
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
SSIGEY +AEEAH+K+IQLD+NFLE W HLTQFYQDLAN KALEC+++VL ID+ F+KA
Sbjct: 378 SSIGEYXRAEEAHMKSIQLDQNFLEGWAHLTQFYQDLANPTKALECIERVLQIDEGFAKA 437
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
YHLRGLL HG+G+HKKAI DLS GLGI+ SNIECLYLRASC HAIGEY EA+
Sbjct: 438 YHLRGLLRHGMGEHKKAITDLSIGLGIENSNIECLYLRASCXHAIGEYGEAI 489
>gi|296087356|emb|CBI33730.3| unnamed protein product [Vitis vinifera]
Length = 981
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/354 (74%), Positives = 304/354 (85%), Gaps = 1/354 (0%)
Query: 287 PIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSIS-DNKSSDSTESR 345
P D + NE+ ++NGT+D+ K S +S ++ N SE SKSS+ +KSSD +E R
Sbjct: 134 PEDTVNGNEKLNSESNGTYDIFVKSSDESELCSELNDTSEQSSKSSVVIHSKSSDISEVR 193
Query: 346 SKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFD 405
K S K+D+ E +EA RNKKFCVTRISK+KSISVDFRLSRGIAQVNEG Y++AISIFD
Sbjct: 194 RKSSNKYDIRSELGDEANRNKKFCVTRISKTKSISVDFRLSRGIAQVNEGNYSNAISIFD 253
Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
QILKEDP YPEAL+GRGTA AFQREL +AI+DFT+AI+SNPSA EAWKRRGQARAALGES
Sbjct: 254 QILKEDPTYPEALVGRGTAYAFQRELSSAIADFTKAIESNPSACEAWKRRGQARAALGES 313
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
EAI+DL+KALEFEPNS DILHERGIVNFKFKDFNAAVEDLSACV+LDKENKSAYTYLGL
Sbjct: 314 SEAIEDLTKALEFEPNSTDILHERGIVNFKFKDFNAAVEDLSACVQLDKENKSAYTYLGL 373
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
ALSSIGEYK+AEEAH+K+IQLD+NFLE W HLTQFYQDLAN KALEC+++VL ID+ F+
Sbjct: 374 ALSSIGEYKRAEEAHMKSIQLDQNFLEGWAHLTQFYQDLANPTKALECIERVLQIDEGFA 433
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
KAYHLRGLL HG+G+HKKAI DLS GLGI+ SNIECLYLRASCYHAIGEY EA+
Sbjct: 434 KAYHLRGLLRHGMGEHKKAITDLSIGLGIENSNIECLYLRASCYHAIGEYGEAI 487
>gi|357482703|ref|XP_003611638.1| Tetratricopeptide repeat protein [Medicago truncatula]
gi|355512973|gb|AES94596.1| Tetratricopeptide repeat protein [Medicago truncatula]
Length = 798
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/409 (63%), Positives = 320/409 (78%), Gaps = 9/409 (2%)
Query: 231 GSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDK 290
G S+P +KS N L E E+ +K + + D SE+ +S+D FD N +
Sbjct: 134 GLSIPQAKSDSSSNRNLTETCESQ------AKLSGNTSDKSEVLLKSADKFDARNELNSE 187
Query: 291 ASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSF 350
+ + Q NG+ D+ D L DS+ D++ + + +S + S+D+ E K SF
Sbjct: 188 GGESSKCDGQVNGSPDIIDNLRYDSS---DTSESCDKVLTNSGESSDSNDAAEILRKPSF 244
Query: 351 KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE 410
K+ E S+EA+++KKF V R+SK+KSISVDFRLSRGIA+VNEGKYA AISIFDQILKE
Sbjct: 245 KFTFPSEKSSEARKSKKFSVARVSKTKSISVDFRLSRGIAEVNEGKYAHAISIFDQILKE 304
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
D YPEALIGRGTA AF+REL +AI+DFT+AIQ NP+AGEAWKRRGQARAALGE VEAI+
Sbjct: 305 DSAYPEALIGRGTAYAFKRELHSAIADFTKAIQYNPAAGEAWKRRGQARAALGEFVEAIE 364
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
DL+KALEFEPN+ADILHERGIVNFKFK+FN AVEDLSACV+LD++NKSAYTYLGLALSSI
Sbjct: 365 DLTKALEFEPNTADILHERGIVNFKFKEFNTAVEDLSACVQLDRDNKSAYTYLGLALSSI 424
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
GEYKKAEEAHLK++QLD++FLEAWGHLTQFYQDL+ KALECL QVL ID RF++AYHL
Sbjct: 425 GEYKKAEEAHLKSLQLDKSFLEAWGHLTQFYQDLSKPTKALECLTQVLQIDGRFARAYHL 484
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG+L H +G+H+KAIKDL++GL ID +NIE LYLRA+CYHA+G+Y+EAV
Sbjct: 485 RGVLFHAMGEHRKAIKDLTTGLSIDGANIESLYLRAACYHAVGQYKEAV 533
>gi|357482701|ref|XP_003611637.1| Tetratricopeptide repeat protein [Medicago truncatula]
gi|355512972|gb|AES94595.1| Tetratricopeptide repeat protein [Medicago truncatula]
Length = 1062
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/409 (63%), Positives = 320/409 (78%), Gaps = 9/409 (2%)
Query: 231 GSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDK 290
G S+P +KS N L E E+ +K + + D SE+ +S+D FD N +
Sbjct: 134 GLSIPQAKSDSSSNRNLTETCESQ------AKLSGNTSDKSEVLLKSADKFDARNELNSE 187
Query: 291 ASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSF 350
+ + Q NG+ D+ D L DS+ D++ + + +S + S+D+ E K SF
Sbjct: 188 GGESSKCDGQVNGSPDIIDNLRYDSS---DTSESCDKVLTNSGESSDSNDAAEILRKPSF 244
Query: 351 KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE 410
K+ E S+EA+++KKF V R+SK+KSISVDFRLSRGIA+VNEGKYA AISIFDQILKE
Sbjct: 245 KFTFPSEKSSEARKSKKFSVARVSKTKSISVDFRLSRGIAEVNEGKYAHAISIFDQILKE 304
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
D YPEALIGRGTA AF+REL +AI+DFT+AIQ NP+AGEAWKRRGQARAALGE VEAI+
Sbjct: 305 DSAYPEALIGRGTAYAFKRELHSAIADFTKAIQYNPAAGEAWKRRGQARAALGEFVEAIE 364
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
DL+KALEFEPN+ADILHERGIVNFKFK+FN AVEDLSACV+LD++NKSAYTYLGLALSSI
Sbjct: 365 DLTKALEFEPNTADILHERGIVNFKFKEFNTAVEDLSACVQLDRDNKSAYTYLGLALSSI 424
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
GEYKKAEEAHLK++QLD++FLEAWGHLTQFYQDL+ KALECL QVL ID RF++AYHL
Sbjct: 425 GEYKKAEEAHLKSLQLDKSFLEAWGHLTQFYQDLSKPTKALECLTQVLQIDGRFARAYHL 484
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG+L H +G+H+KAIKDL++GL ID +NIE LYLRA+CYHA+G+Y+EAV
Sbjct: 485 RGVLFHAMGEHRKAIKDLTTGLSIDGANIESLYLRAACYHAVGQYKEAV 533
>gi|357482705|ref|XP_003611639.1| Tetratricopeptide repeat protein [Medicago truncatula]
gi|355512974|gb|AES94597.1| Tetratricopeptide repeat protein [Medicago truncatula]
Length = 1033
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/409 (63%), Positives = 320/409 (78%), Gaps = 9/409 (2%)
Query: 231 GSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDK 290
G S+P +KS N L E E+ +K + + D SE+ +S+D FD N +
Sbjct: 134 GLSIPQAKSDSSSNRNLTETCESQ------AKLSGNTSDKSEVLLKSADKFDARNELNSE 187
Query: 291 ASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSF 350
+ + Q NG+ D+ D L DS+ D++ + + +S + S+D+ E K SF
Sbjct: 188 GGESSKCDGQVNGSPDIIDNLRYDSS---DTSESCDKVLTNSGESSDSNDAAEILRKPSF 244
Query: 351 KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE 410
K+ E S+EA+++KKF V R+SK+KSISVDFRLSRGIA+VNEGKYA AISIFDQILKE
Sbjct: 245 KFTFPSEKSSEARKSKKFSVARVSKTKSISVDFRLSRGIAEVNEGKYAHAISIFDQILKE 304
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
D YPEALIGRGTA AF+REL +AI+DFT+AIQ NP+AGEAWKRRGQARAALGE VEAI+
Sbjct: 305 DSAYPEALIGRGTAYAFKRELHSAIADFTKAIQYNPAAGEAWKRRGQARAALGEFVEAIE 364
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
DL+KALEFEPN+ADILHERGIVNFKFK+FN AVEDLSACV+LD++NKSAYTYLGLALSSI
Sbjct: 365 DLTKALEFEPNTADILHERGIVNFKFKEFNTAVEDLSACVQLDRDNKSAYTYLGLALSSI 424
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
GEYKKAEEAHLK++QLD++FLEAWGHLTQFYQDL+ KALECL QVL ID RF++AYHL
Sbjct: 425 GEYKKAEEAHLKSLQLDKSFLEAWGHLTQFYQDLSKPTKALECLTQVLQIDGRFARAYHL 484
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG+L H +G+H+KAIKDL++GL ID +NIE LYLRA+CYHA+G+Y+EAV
Sbjct: 485 RGVLFHAMGEHRKAIKDLTTGLSIDGANIESLYLRAACYHAVGQYKEAV 533
>gi|115470301|ref|NP_001058749.1| Os07g0113700 [Oryza sativa Japonica Group]
gi|33147009|dbj|BAC80093.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa
Japonica Group]
gi|34393726|dbj|BAC83208.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa
Japonica Group]
gi|113610285|dbj|BAF20663.1| Os07g0113700 [Oryza sativa Japonica Group]
gi|218198988|gb|EEC81415.1| hypothetical protein OsI_24660 [Oryza sativa Indica Group]
Length = 1011
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/259 (72%), Positives = 221/259 (85%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+DFRLSRGIAQVNEG+Y AISIFDQIL+E P YPEALIGRGTA AFQREL++AISDFT+
Sbjct: 264 LDFRLSRGIAQVNEGRYDQAISIFDQILRETPTYPEALIGRGTAYAFQRELDSAISDFTK 323
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AIQSNPSAGEAWKRRGQARAALGE EA++DL+KALEFEPNS DILHERGIVNFKFKD+N
Sbjct: 324 AIQSNPSAGEAWKRRGQARAALGEFTEAVEDLTKALEFEPNSPDILHERGIVNFKFKDYN 383
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AAVEDLS CVK DK+N SA+TYLGL LS++GEYK+AE+ HL I+ D NFL++W HL+Q
Sbjct: 384 AAVEDLSTCVKRDKKNSSAHTYLGLTLSALGEYKRAEDEHLLGIKYDENFLDSWAHLSQL 443
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
Y D+ EK L +++VL ID F KAYHLRG+L HG+G+H+ AIKDLS L + SNIE
Sbjct: 444 YLDIGCPEKMLNNVEKVLQIDVSFGKAYHLRGILYHGMGRHRSAIKDLSVALKHESSNIE 503
Query: 621 CLYLRASCYHAIGEYREAV 639
CLYLRASC+HAIGEY+ A+
Sbjct: 504 CLYLRASCHHAIGEYKAAI 522
>gi|357111747|ref|XP_003557673.1| PREDICTED: tetratricopeptide repeat protein 13-like [Brachypodium
distachyon]
Length = 1002
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/259 (72%), Positives = 224/259 (86%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+DFRLSRGIAQVNEG+Y AISIFDQIL+E P YPEALIGRGTA AFQREL++AISDFT+
Sbjct: 255 LDFRLSRGIAQVNEGRYDQAISIFDQILRETPTYPEALIGRGTAYAFQRELDSAISDFTK 314
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AIQSNP AGEAWKRRGQARAALGE VEAI+DL+KALEFEP+S DILHERGIV+FKFKD+N
Sbjct: 315 AIQSNPLAGEAWKRRGQARAALGEFVEAIEDLTKALEFEPDSPDILHERGIVSFKFKDYN 374
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
+AVEDLS CVK DK+N SA+TYLGL LS++GEYK+AE+ HL I+ D +FL++W HL+Q
Sbjct: 375 SAVEDLSTCVKRDKKNSSAHTYLGLTLSAVGEYKRAEDEHLLGIKYDGSFLDSWAHLSQL 434
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
Y DLA EK L L++VL ID RFSKAYHLRG+L HG+G+H+ AIK+LS L D S+IE
Sbjct: 435 YLDLAYPEKMLNNLEKVLQIDSRFSKAYHLRGILYHGMGRHRSAIKELSIALTYDSSSIE 494
Query: 621 CLYLRASCYHAIGEYREAV 639
CLYLRASC+HA+GEY+ A+
Sbjct: 495 CLYLRASCHHAVGEYKAAI 513
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 133/211 (63%), Gaps = 18/211 (8%)
Query: 40 RIELAKLCSLRNWSKAIRILDSLLAQSYE-IQDICNRAFCYSQLELHKHVIRDCDKALQL 98
R ELA+LCS RNWSKAIR+LD+LLA+S I D+CNRAFCYSQLELHKHV++DCD+ALQL
Sbjct: 5 RGELARLCSGRNWSKAIRLLDALLARSPSSIHDLCNRAFCYSQLELHKHVVKDCDRALQL 64
Query: 99 DPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRS 158
DPTLL AY+LKG A ALG+KEEAL W++G+ A + DLKQ LELEEL+++ K +
Sbjct: 65 DPTLLHAYVLKGKALCALGKKEEALVAWDQGHGIAARDTIDLKQLLELEELVSSVKICET 124
Query: 159 VTCE--YDVSNSMSSLTVSESGLNANDKMSETSENHNKSDIC-DSSSQSRDVSETCSKSS 215
V E D+S + + +SE + A + KS +C D+ S+D S+
Sbjct: 125 VEREGVVDLSPCDTKVVISEDCVAA-------TTTDTKSVVCEDNIENSKD------SSN 171
Query: 216 HDPDLCNGRSDEAKGGSSVPVSKSGLHINGK 246
D L N D K SS +G H N K
Sbjct: 172 GDMTLPNSCKDH-KDSSSPANDATGTHPNPK 201
>gi|125598900|gb|EAZ38476.1| hypothetical protein OsJ_22864 [Oryza sativa Japonica Group]
Length = 955
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/261 (60%), Positives = 191/261 (73%), Gaps = 27/261 (10%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I + LS +A VNEG+Y AISIFDQIL+E P YPEALIGRGTA AFQREL++AISDF
Sbjct: 233 IILTIGLSNSMASVNEGRYDQAISIFDQILRETPTYPEALIGRGTAYAFQRELDSAISDF 292
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
T+A++ DL+KALEFEPNS DILHERGIVNFKFKD
Sbjct: 293 TKAVE---------------------------DLTKALEFEPNSPDILHERGIVNFKFKD 325
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+NAAVEDLS CVK DK+N SA+TYLGL LS++GEYK+AE+ HL I+ D NFL++W HL+
Sbjct: 326 YNAAVEDLSTCVKRDKKNSSAHTYLGLTLSALGEYKRAEDEHLLGIKYDENFLDSWAHLS 385
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
Q Y D+ EK L +++VL ID F KAYHLRG+L HG+G+H+ AIKDLS L + SN
Sbjct: 386 QLYLDIGCPEKMLNNVEKVLQIDVSFGKAYHLRGILYHGMGRHRSAIKDLSVALKHESSN 445
Query: 619 IECLYLRASCYHAIGEYREAV 639
IECLYLRASC+HAIGEY+ A+
Sbjct: 446 IECLYLRASCHHAIGEYKAAI 466
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 120/164 (73%), Gaps = 5/164 (3%)
Query: 40 RIELAKLCSLRNWSKAIRILDSLLAQSYE-IQDICNRAFCYSQLELHKHVIRDCDKALQL 98
R ELA++C RNWSKAIRILD+ LA+S I D+CNRAFCYSQLELHKHV++DCD+AL+L
Sbjct: 5 RAELARVCGGRNWSKAIRILDAHLARSPSSIHDLCNRAFCYSQLELHKHVVKDCDRALEL 64
Query: 99 DPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRS 158
DP LLQAY+LKG A SALG++EEAL+VWE+G+E A+ + DLKQ LELEEL+++ K +
Sbjct: 65 DPALLQAYVLKGKALSALGKREEALAVWEQGHEVAVRDTMDLKQLLELEELVSSVKICET 124
Query: 159 VTCE---YDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICD 199
+ CE D S + + +SE + + + T+ K+ +C+
Sbjct: 125 IECEDRVVDASPCDTKVVISEDRV-VDTSCTATTMADTKTVVCE 167
>gi|168025982|ref|XP_001765512.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683362|gb|EDQ69773.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 976
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 142/271 (52%), Positives = 197/271 (72%), Gaps = 5/271 (1%)
Query: 373 ISKSK----SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+SKS+ S++VD +LS+GI QVN G Y A++IF+ IL E+P AL+GRGTA AF
Sbjct: 223 VSKSRQNRLSVTVDMKLSKGIQQVNRGNYEEAVNIFNSILTENPKSCGALLGRGTAYAFM 282
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
R+L+ AI+DF++AI+ +P EAWKRRGQARAA GE +A++DLS+A++ EP + D+LHE
Sbjct: 283 RKLQKAITDFSKAIEVDPKTTEAWKRRGQARAASGEIAQALEDLSRAVQLEP-TPDLLHE 341
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG++NFK K+F AA+EDL C+ D NK AY YLGLALS+ G Y +A +A++LD
Sbjct: 342 RGVINFKLKNFFAAIEDLKGCLAQDTHNKHAYNYLGLALSATGNYVDGIKAQRRAVELDN 401
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
F E W HL Q Y++LA+SEKA+ECL++ IDK++ AY + G+LLHGLG+H+ A K L
Sbjct: 402 KFKEGWAHLAQSYKELADSEKAVECLKKATEIDKKYGGAYRIWGILLHGLGEHRNAAKLL 461
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ L +D +ECLYLR S + A+GE+ AV
Sbjct: 462 TTALELDADTMECLYLRGSTFQALGEFTNAV 492
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
C + WSKAIRI+ SL ++ + NRA+CYS+LELHKHVI+D D+A+ ++P+ LQAY
Sbjct: 20 CKKKEWSKAIRIISSL-PETTNSHLLLNRAWCYSKLELHKHVIKDADRAIAINPSTLQAY 78
Query: 107 ILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEEL 149
+ KG A +AL + EA VW+KGYE AL +L ++L L
Sbjct: 79 LYKGQALAALKKHVEACQVWQKGYESALGLPEELPFVVQLHSL 121
>gi|440796500|gb|ELR17609.1| tetratricopeptide repeat domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 898
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 157/264 (59%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
S + ++D +++ G VN G + AI +F+ ++ P A +GRGTA A L A+
Sbjct: 204 SGNTTLDEKIAMGYLHVNTGNFPQAIKLFNVLVNLYPKLVAAYLGRGTAYALSGHLSTAV 263
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+F+ AI+ + + EAWKRRGQ+RAA+G+ EA+ DL++A E P ADI H+RG++ FK
Sbjct: 264 EEFSAAIKIDDTCMEAWKRRGQSRAAMGQDAEAVLDLTRAAELAPKDADIYHQRGLIYFK 323
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+++ A ED D +K ++ +LGL L+++G +A +AH +A++LD F EA
Sbjct: 324 LRNYGRAAEDFRRATAADAMSKLSWNHLGLCLNALGRPMEAIQAHKRALELDPAFREALA 383
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
++ Q Y+D NS KA + + L +D + A+HLRGL G G H+ A+ D ++ L +D
Sbjct: 384 NIGQAYKDYGNSLKAEKYFAKGLKVDPNYMHAFHLRGLARFGAGDHRGALSDFTAALRVD 443
Query: 616 PSNIECLYLRASCYHAIGEYREAV 639
+ + +R H +G +REAV
Sbjct: 444 DKHKDSRLMRGIVLHGLGRFREAV 467
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 78 CYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
Y +L L++ + DC+ AL+L P + Y+LKG A + + +A + W G + A
Sbjct: 33 AYLRLGLYRKCLADCEAALRLQPADPRPYLLKGKALVGMNKSADAEAAWRAGLDKA 88
>gi|388522451|gb|AFK49287.1| unknown [Lotus japonicus]
Length = 174
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 125/175 (71%), Gaps = 10/175 (5%)
Query: 33 MASAITA-RIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRD 91
MA A T+ R+EL + C+ ++WSKAIR+LDSL+++S IQDICNRAFCY +LELHKHVI+D
Sbjct: 1 MAPAATSERVELTRFCASKDWSKAIRVLDSLISRSASIQDICNRAFCYGKLELHKHVIKD 60
Query: 92 CDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLT 151
CD+ALQLDP LQ +ILKGCA S LGRK +AL VWE+GYEHALH S DL+Q LELEELL
Sbjct: 61 CDRALQLDPAFLQPHILKGCALSELGRKADALLVWEQGYEHALHHSGDLRQLLELEELLR 120
Query: 152 AAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK-----SDICDSS 201
AKQ E +S+ +SES +N+ SET +N ++ D CD S
Sbjct: 121 TAKQGNDALSE----TRAASVPLSESRSLSNENSSETDKNQDRLAQLCGDACDKS 171
>gi|298714022|emb|CBJ27254.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1062
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 147/259 (56%), Gaps = 1/259 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD ++ G QVN G Y A+ +F +L P A +G G+A A +E A++ F+
Sbjct: 314 VDNLIALGYLQVNTGNYRKAVELFRGLLSIRPGLVGAHLGLGSALALLGGMEHAVASFSA 373
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFKFKDF 499
AI+++P + WKRRGQ RAALG +V A+ DL +A+E F D+LH+RG+V K + F
Sbjct: 374 AIEADPLEPDCWKRRGQTRAALGHAVGALSDLDRAVELFNGRDPDVLHQRGMVYHKLRYF 433
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ AV D S VK ++K+ + + L +GE + AEEA+ +A+ +D +F EAW +L
Sbjct: 434 SRAVSDFSEVVKSSVDSKTDWNMMALCRGQLGEPEAAEEAYRQALAIDPSFKEAWTNLGS 493
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+D EKAL L +D + AYHLRGL HG+G HK A D GL D +
Sbjct: 494 LLRDWGKGEKALGAFDNALSLDTAYVHAYHLRGLCKHGMGDHKGAQADFMRGLFYDGQDE 553
Query: 620 ECLYLRASCYHAIGEYREA 638
C Y+ A C HA G+ EA
Sbjct: 554 HCRYMAALCMHARGQLEEA 572
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
+ CNRA LE+ + IRD D A+++D L+AY+LK AF LG+ ++A E
Sbjct: 38 VYTACNRATAKLGLEMFRACIRDLDDAIRIDQYALRAYLLKDQAFRGLGKPDQAREALEA 97
Query: 129 GYEHALHQSADLKQFLELEELL 150
G E A + D+ +++L E L
Sbjct: 98 GIE-AGKEGGDVVLYVQLVESL 118
>gi|330789949|ref|XP_003283061.1| hypothetical protein DICPUDRAFT_146678 [Dictyostelium purpureum]
gi|325087133|gb|EGC40514.1| hypothetical protein DICPUDRAFT_146678 [Dictyostelium purpureum]
Length = 1045
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 161/271 (59%), Gaps = 16/271 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S G VN GKY AI+IF +++ +P+ P + +GRGT+ AF +L+ AI DF++AI+
Sbjct: 300 ISNGNFFVNSGKYKEAIAIFTTVIENNPLIPSSYLGRGTSNAFLGDLDEAIYDFSKAIEL 359
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS-ADILHERGIVNFKFKDFNAAV 503
+ ++ +A+KRRGQ++ A G EA++D ++A+ F+ S DI + RG+++++ +++ A+
Sbjct: 360 DNTSSDAYKRRGQSKVARGMEYEALEDFNQAVAFDKESDYDIYYNRGLLHYQMRNYERAL 419
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+D V ++ ++ A+ +GL L+ G +A A L++I +D NF ++ ++ Q ++D
Sbjct: 420 KDFKKVVSIEPQHTLAWNRIGLCLNVNGYPMEAYNAFLQSISIDPNFEASYTNIGQCWRD 479
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL----------- 612
L +K+LE + L I + A HLRGLL + G+H AIKD S L
Sbjct: 480 LGIFDKSLEAFNKALEICPNYCNALHLRGLLFYNSGRHLDAIKDWSIFLQEQLQKEKEPN 539
Query: 613 ----GIDPSNIECLYLRASCYHAIGEYREAV 639
IDPS + RA YH++G+ REA+
Sbjct: 540 GTIQPIDPSTNDVKQFRAVTYHSLGQIREAL 570
>gi|260804501|ref|XP_002597126.1| hypothetical protein BRAFLDRAFT_76343 [Branchiostoma floridae]
gi|229282389|gb|EEN53138.1| hypothetical protein BRAFLDRAFT_76343 [Branchiostoma floridae]
Length = 989
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 162/613 (26%), Positives = 275/613 (44%), Gaps = 99/613 (16%)
Query: 52 WSKAIRILDSLL---AQSYEIQDI----CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
++ AI++L +L +S E ++I CN A CY +L L + V+ CD A++ D LQ
Sbjct: 22 YNDAIKLLSQVLKDKGRSLEPREIAAVHCNLASCYLKLGLLRKVVSSCDAAIKADAASLQ 81
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYD 164
AY+ KG S L E +SV E + +L + +++
Sbjct: 82 AYLYKGETVSVLSPAGETVSVLSPAGE-------------TVRQLSVLSPTGETISVLSP 128
Query: 165 VSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGR 224
++S L+ + ++ + K D Q+R V E+ GR
Sbjct: 129 TGETVSVLSPAGETISVLSPTGKALHRLKKPD------QARQVWESAL----------GR 172
Query: 225 SDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDIC 284
+ + S I G ++ + E+ +G + T + D + R ++ ++
Sbjct: 173 YGDFQVLS---------EILGCIQCLEEDTSGPT--PTQTKVNGDPAHYGRSTTPP-NLQ 220
Query: 285 NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
G D+ + T GT D ND S+ +K+++ ++ DS ++
Sbjct: 221 QGTADRGDSE----KTTEGTADSQG---------NDKTAESQDSNKTTVGTAENQDSNKT 267
Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
+ E + +K F R S +F++ RG VNEG Y AI +F
Sbjct: 268 AVGTA-------EGQDSSKTTGGFLDPR-------SPEFKVGRGFLLVNEGNYDEAIKLF 313
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
+ IL+ PM +A +GRGTA A R+L A +DFT+A+ P E WKRRGQ RAALG+
Sbjct: 314 NTILQLHPMTYKAYVGRGTAYAMTRQLLKAEADFTQALTLEPKETEIWKRRGQVRAALGQ 373
Query: 465 SVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDFNAAVEDLSACV------------- 510
+AI+DL++A + DI E G++ + A +++SA +
Sbjct: 374 EGQAIEDLNRAQSICKVVDVDIQKEVGLI------YQAKGDNVSALMHFTRADKVLLVKQ 427
Query: 511 ---KLDK-ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+LDK + K+ + +GL +S+G A + +A+ LD +F E+ ++ Q Y+D N
Sbjct: 428 KQGELDKSQAKTLWNAMGLCQNSLGYCMDAVVTYQRALNLDPDFRESIVNMAQAYKDYGN 487
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+KA E + L +D R +L GL L+G G+ +++ L + P N +CLY+
Sbjct: 488 FQKADELFARALRLDPRCVTTLNLHGLCLYGAGEIRRSYDTHCKLLEVAPHNEDCLYMHG 547
Query: 627 SCYHAIGEYREAV 639
A+G +R+AV
Sbjct: 548 ISAQALGLFRKAV 560
>gi|281207321|gb|EFA81504.1| tetratricopeptide-like helical domain-containing protein
[Polysphondylium pallidum PN500]
Length = 763
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 159/257 (61%), Gaps = 1/257 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S+G VN G Y AI +F I+ +P+ P A +GRGT+ A L+ AI DF++ I+
Sbjct: 234 ISKGNYMVNSGLYEEAIQLFTLIINSNPLIPSAYLGRGTSNAITGNLDDAIYDFSKVIEL 293
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDFNAAV 503
+ + G+A+KRRGQ+R A G EA++D ++A F+ N +DI ++RG+++++ +++ A+
Sbjct: 294 DNTMGDAYKRRGQSRVAKGMDFEALEDFNQAAIFDRDNDSDIYYQRGLLHYQMRNYERAL 353
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+D V+ D+ NK A+ +GL L+ G ++A +A +AI+LD F A+ ++ Q +++
Sbjct: 354 KDFRKVVEFDRRNKLAWNRVGLCLNIRGFPREAFDAFDRAIELDSQFEAAFTNVGQCWKE 413
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ + +++ + Q L I +S A HLRG+L G+H +AI+D + L D + +
Sbjct: 414 IGDYDRSYDAFTQALSIAPNYSNALHLRGILFFNSGKHLQAIQDWTDFLDQDSTIADLRQ 473
Query: 624 LRASCYHAIGEYREAVI 640
LRA +IG+YR++++
Sbjct: 474 LRAISNCSIGKYRDSIV 490
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 32 VMASAITARIELAKLCSLRNWSKAIRILDSLL-AQSYEIQDICNRAFCYSQLELHKHVIR 90
+M S + R E K N+S++I++++ ++ + ++ I NRA C+ +LEL++H I+
Sbjct: 17 MMESIESIRKEAIKCYQNANYSESIKLINKIIQSDRNDLTAISNRATCHYKLELYQHCIK 76
Query: 91 DCDKALQLDP 100
DCD L P
Sbjct: 77 DCDTVLASQP 86
>gi|384250834|gb|EIE24313.1| protein prenylyltransferase [Coccomyxa subellipsoidea C-169]
Length = 859
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 157/267 (58%), Gaps = 12/267 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQIL--KEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+S ++ VNEG A+AI I D I+ A + RGTARA R+L+ AI DF+ I
Sbjct: 125 VSIAVSHVNEGNLAAAIDILDHIIATTSGAHLSGAHVARGTARAMMRDLKGAIDDFSVTI 184
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF---EP-NSADILHERGIVNFKFKD 498
++ P+ G+AW RRGQARAALGE +A+ DL++ L+ EP A+ ERG + K +D
Sbjct: 185 EAVPAYGDAWMRRGQARAALGEDEDALVDLARCLQLSATEPARQAEARLERGKILHKLRD 244
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ +AV +L V ++ +++ A+ +LGL S+G+ + + + ++++ N LEAW HL
Sbjct: 245 YRSAVAELQQAVDINPKSQQAWNFLGLCQVSMGDIRPGAACYERVLRVNPNSLEAWMHLA 304
Query: 559 QFYQDLANSEKALECLQQVLYIDK---RFSKAYHLRGLLLHGLGQHKKAIKDLSSGL--G 613
Q ++ A+ E A + +D+ R S + + GLG+H+KA K L L
Sbjct: 305 QARKEEASVEAAEAAFARAAELDRDGGRASARLRMHAHMCQGLGRHRKAAKLLKEALEAS 364
Query: 614 IDP-SNIECLYLRASCYHAIGEYREAV 639
+P + +ECL+LR +C+HAIGE+ EAV
Sbjct: 365 SNPDAVVECLHLRGACHHAIGEFIEAV 391
>gi|159462574|ref|XP_001689517.1| predicted chloroplast-targeted protein [Chlamydomonas reinhardtii]
gi|158283505|gb|EDP09255.1| predicted chloroplast-targeted protein [Chlamydomonas reinhardtii]
Length = 929
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 144/267 (53%), Gaps = 16/267 (5%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
+ Q+N G A +I D++L + P A + RGTARA +R+L A+ DF AI+ P
Sbjct: 175 VTQINSGSIVEAEAILDKVLVKTPRELGARVARGTARALRRDLAGAVEDFGVAIEVEPRY 234
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEP---------NSADILHERGIVNFKFKDF 499
++WKRRGQAR+ALG+ A+ DL KA++ P + A+ E+G++ K +D+
Sbjct: 235 ADSWKRRGQARSALGDHEGALADLQKAIDLAPLFGGPDSAQSRAECYVEKGMIYQKMRDY 294
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A +L VKLD N A+ LGL +S G+ + A+ KA++L+ E W ++ Q
Sbjct: 295 RRACRELQQAVKLDGSNAQAWNVLGLCSTSQGDIRDGVRAYEKAVELNPKLKEGWVNMGQ 354
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL---HGLGQHKKAIKDLSSGLGI-- 614
++ +++A L + L +D A H+ +L G+H AIK L L +
Sbjct: 355 ALKEEGRTKEAERVLLKALALDPPDQPAVHVLRVLAQMKQQKGEHAAAIKLLDRALPVAE 414
Query: 615 --DPSNIECLYLRASCYHAIGEYREAV 639
D IE LYLRA CYHA+G REAV
Sbjct: 415 ARDEQVIEVLYLRAICYHALGAAREAV 441
>gi|218442020|ref|YP_002380349.1| hypothetical protein PCC7424_5131 [Cyanothece sp. PCC 7424]
gi|218174748|gb|ACK73481.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 361
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 162/292 (55%), Gaps = 5/292 (1%)
Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQI 407
LSF + +K S + N + + + S++ SV+ ++G+A++ G +++AI F ++
Sbjct: 18 LSFGIEPVKAQS--PRSNPQPLLAQNSQN---SVEVLFNQGVAKIKAGNFSAAIKDFTEV 72
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ +P PEA RG AR+ + + AI D+ +AI NP + +A+ RG+AR+ LG++
Sbjct: 73 IRLNPNLPEAYNNRGNARSKLGDNKGAIEDYNQAINLNPKSEQAYYNRGKARSELGDNKG 132
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI+D ++AL PNSA+ + RGI + KD A++DL+ ++L+ + AY+ G
Sbjct: 133 AIEDYNQALNLNPNSAEAYNNRGISRHELKDHVGAMQDLNQAIRLNPKMAEAYSNRGNVR 192
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
++IG+ A + AI LD N EA+ + Y + + +KA + Q + +D + A
Sbjct: 193 TTIGDTFGAFKDLNHAIGLDPNSAEAYNNRGVTYARVGDYQKAFQDFNQAIGLDPQLGLA 252
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y+ RG++ G H AI+DL+ L DP + R + +G +REA+
Sbjct: 253 YNNRGVMRREFGDHAGAIQDLNQALRFDPKLAKAYNNRGDTHRELGNHREAI 304
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 116/231 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G AI ++Q L +P EA RG +R ++ A+ D +AI+ N
Sbjct: 119 NRGKARSELGDNKGAIEDYNQALNLNPNSAEAYNNRGISRHELKDHVGAMQDLNQAIRLN 178
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG R +G++ A +DL+ A+ +PNSA+ + RG+ + D+ A +D
Sbjct: 179 PKMAEAYSNRGNVRTTIGDTFGAFKDLNHAIGLDPNSAEAYNNRGVTYARVGDYQKAFQD 238
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + LD + AY G+ G++ A + +A++ D +A+ + +++L
Sbjct: 239 FNQAIGLDPQLGLAYNNRGVMRREFGDHAGAIQDLNQALRFDPKLAKAYNNRGDTHRELG 298
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
N +A++ Q + + Y+ RG++ LG + AI+D + IDP
Sbjct: 299 NHREAIQDYDQAVRLIPDNPNIYYYRGVVRTQLGDFQGAIEDYHQAVTIDP 349
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 32 VMASAITARIELAKL-CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIR 90
V+ + A+I+ +++++++ IR L+ L ++Y NR S+L +K I
Sbjct: 48 VLFNQGVAKIKAGNFSAAIKDFTEVIR-LNPNLPEAYN-----NRGNARSKLGDNKGAIE 101
Query: 91 DCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELL 150
D ++A+ L+P QAY +G A S LG + A+ D Q L L
Sbjct: 102 DYNQAINLNPKSEQAYYNRGKARSELGDNKGAIE--------------DYNQALNLNPNS 147
Query: 151 TAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHN--KSDICDSSSQSRDVS 208
A +R ++ +++ + + ++ + N KM+E N ++ I D+ +D++
Sbjct: 148 AEAYNNRGIS-RHELKDHVGAMQDLNQAIRLNPKMAEAYSNRGNVRTTIGDTFGAFKDLN 206
Query: 209 ETCSKSSHDPDLCNGRS 225
+ + N R
Sbjct: 207 HAIGLDPNSAEAYNNRG 223
>gi|428182577|gb|EKX51437.1| hypothetical protein GUITHDRAFT_66029 [Guillardia theta CCMP2712]
Length = 682
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 122/218 (55%), Gaps = 6/218 (2%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN------ 481
Q L AA DF+ A+ ++P+ +AWKRRGQ RAALG EAI+DL+KA P+
Sbjct: 2 QGNLAAAAKDFSRAVDADPNVADAWKRRGQTRAALGFDQEAIKDLTKAASLSPDHEYAYL 61
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ D +RGIV K DF A+ D + +D + + ++GL +S+G ++A A+
Sbjct: 62 TCDFFFQRGIVYHKMMDFRKALTDFRKALNIDGSSPITWNFVGLCENSLGRTREAIIAYE 121
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+A QLD N EAW +L Q Y+D + + A + +D + YHLRGLL +G G+
Sbjct: 122 RATQLDPNMKEAWANLGQAYRDAGDRQNAEKYFAMAEKLDPNYVHCYHLRGLLFYGCGEI 181
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ A+ D S G D ++ C ++A C H++G+ A+
Sbjct: 182 RLALHDFSRGHECDRNDKNCFLMKAVCKHSLGDMSGAI 219
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 111/249 (44%), Gaps = 15/249 (6%)
Query: 325 SESYSKSSISDNKSSDST----ESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSIS 380
++ +S++ +D +D+ ++R+ L F + +K+ + A ++ + ++
Sbjct: 9 AKDFSRAVDADPNVADAWKRRGQTRAALGFDQEAIKDLTKAAS------LSPDHEYAYLT 62
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR-AFQRELEAAISDFT 439
DF RGI + A++ F + L D P G + R EA I+ +
Sbjct: 63 CDFFFQRGIVYHKMMDFRKALTDFRKALNIDGSSPITWNFVGLCENSLGRTREAIIA-YE 121
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A Q +P+ EAW GQA G+ A + + A + +PN H RG++ + +
Sbjct: 122 RATQLDPNMKEAWANLGQAYRDAGDRQNAEKYFAMAEKLDPNYVHCYHLRGLLFYGCGEI 181
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---RNFLEAWGH 556
A+ D S + D+ +K+ + + S+G+ A + +++D + + A GH
Sbjct: 182 RLALHDFSRGHECDRNDKNCFLMKAVCKHSLGDMSGAISEYTLLLKMDPVRKELMVAAGH 241
Query: 557 LTQFYQDLA 565
L + ++LA
Sbjct: 242 LCYYQRELA 250
>gi|156363467|ref|XP_001626065.1| predicted protein [Nematostella vectensis]
gi|156212927|gb|EDO33965.1| predicted protein [Nematostella vectensis]
Length = 730
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 139/266 (52%), Gaps = 6/266 (2%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-----FQRELEA 433
+ V F + I+ + G AIS F +I+KE P A +GRGTA + +A
Sbjct: 4 LFVSFITAHAISLLGCGDIDDAISYFTKIIKEHPKVTSAFLGRGTAYVKKGIQIKENSDA 63
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AISDF+ I +P E W RR + + +G EAI+D+S AL +P SA++ G ++
Sbjct: 64 AISDFSTVISHSPKNPEGWIRRAEVLSPIGRIPEAIKDISVALSLQP-SAELYLISGTLH 122
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F +D+ A ++L ++ + +A YLGL+L G ++A + KA+Q + N E
Sbjct: 123 FMSEDYVTATKNLEKSLEYNPSQATATLYLGLSLYHRGLIQQAIPLYKKALQANTNTAEV 182
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
L Y++L ++ A E L ++ R ++ +HLRG+L + G+ A+ D +
Sbjct: 183 HRSLGHAYRELGDASAAYEHFTAALLLEPRSAETFHLRGMLQYMNGKPALALNDFKACQS 242
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
DP N CLY++A CY +G + E V
Sbjct: 243 FDPQNTACLYMKAVCYATLGNFYETV 268
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
++ S S + L G Y +A ++ L+ +P A + G + + ++
Sbjct: 104 VALSLQPSAELYLISGTLHFMSEDYVTATKNLEKSLEYNPSQATATLYLGLSLYHRGLIQ 163
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI + +A+Q+N + E + G A LG++ A + + AL EP SA+ H RG++
Sbjct: 164 QAIPLYKKALQANTNTAEVHRSLGHAYRELGDASAAYEHFTAALLLEPRSAETFHLRGML 223
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+ A+ D AC D +N + + +++G +
Sbjct: 224 QYMNGKPALALNDFKACQSFDPQNTACLYMKAVCYATLGNF 264
>gi|282897129|ref|ZP_06305131.1| TPR repeat protein [Raphidiopsis brookii D9]
gi|281197781|gb|EFA72675.1| TPR repeat protein [Raphidiopsis brookii D9]
Length = 1279
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 155/668 (23%), Positives = 284/668 (42%), Gaps = 71/668 (10%)
Query: 3 KRKLLDSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSL 62
KR L +RY L I + ++++ ++ A AR + C LRN+ +AI +
Sbjct: 312 KRGL--ARYDLGDKQGAIDDFNQVITINPHFADGYAARGLV--YCDLRNYQEAINDFNQT 367
Query: 63 L------AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSAL 116
+ AQ+Y NR SQL + I D +L L+P AY +G S L
Sbjct: 368 IRINPNYAQAYH-----NRGVARSQLGDKQGAIDDYTHSLNLNPKFASAYYNRGIIRSDL 422
Query: 117 GRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSE 176
G ++ A+ D Q ++++ A +R Y + N ++
Sbjct: 423 GSQKAAMD--------------DYTQAIKIDPNYAQAYNNRGAIRTY-LGNYQGAIDDYI 467
Query: 177 SGLNANDKMSETSENHNKSDI--------CDSSSQSRDVSETCSKSSHDPDLCNGRSDEA 228
L + +E N + I D +Q+ +++ +++ + + +
Sbjct: 468 QALRVDSNYAEVYHNWGTTRINLEDNQGAIDDYTQALNINPNYAQAYYGRGIARFNLGDK 527
Query: 229 KGGSSVPVSKSGLHINGKLREVSENHN--GSSDGSKSTHASRDASEINRQSSDDFDICNG 286
+G ++ L+IN + N +S G K +N + D
Sbjct: 528 QG--AIDDYTQALNINPNYAQAYYNRGIARTSLGDKQGAVDDYTQALNINPNYDQAYYAW 585
Query: 287 PIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESY-----SKSSISDNKSS-- 339
+ + + ++ G N T +LN + + E+Y ++S + DN+ +
Sbjct: 586 GMVCSELGDKPGAVNNYTQ-----------ALNINPDDPETYIARGLTRSELGDNQGAID 634
Query: 340 DSTESRSKLSFKWDMLKETSNEAK-----RNKKFCVTRISKSKSISVDF---RLSRGIAQ 391
D T++ L+ D +N + + + +++ +IS D+ +RGIA
Sbjct: 635 DYTQA---LNLNPDYAYIYNNRGVVRSDIADYQRAIDDYTQALNISPDYADAYYNRGIAY 691
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+ G Y SAI + + ++ P + +GRGTA + + AI+DF A+ + S +A
Sbjct: 692 YDLGNYQSAIDDYTRSIEIKPNCADTYVGRGTALYKLGDSQGAINDFHHALDIDASYADA 751
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ RG R LG+ AI D + AL PN A + RGIV ++ +D A+ED + V
Sbjct: 752 YNNRGIVRYELGDYQGAINDFNHALNINPNYAQAYNNRGIVRYELRDNQGAMEDFNHAVN 811
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
++ AY G+ +GE + A E +AI + N+ E++ + +L N +KA+
Sbjct: 812 INSNYAQAYNNRGIVRICLGERQLAIEDFSQAIIIAYNYTESYINRGYARYELGNRQKAI 871
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
E Q L I+ +++AY+ RG+ LG + A D S + I+P E RA +
Sbjct: 872 EDFNQALNINPNYAQAYNNRGVAYTDLGDREWAKDDFSQAIQINPYYAEAYNNRAIVCYE 931
Query: 632 IGEYREAV 639
+G+++ A+
Sbjct: 932 LGDHQGAI 939
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 135/263 (51%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
S D RG+A+ + G AI F+Q++ +P + + RG R + AI+
Sbjct: 303 NSAFFDAYTKRGLARYDLGDKQGAIDDFNQVITINPHFADGYAARGLVYCDLRNYQEAIN 362
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
DF + I+ NP+ +A+ RG AR+ LG+ AI D + +L P A + RGI+
Sbjct: 363 DFNQTIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTHSLNLNPKFASAYYNRGIIRSDL 422
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
AA++D + +K+D AY G + +G Y+ A + +++A+++D N+ E + +
Sbjct: 423 GSQKAAMDDYTQAIKIDPNYAQAYNNRGAIRTYLGNYQGAIDDYIQALRVDSNYAEVYHN 482
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+L +++ A++ Q L I+ +++AY+ RG+ LG + AI D + L I+P
Sbjct: 483 WGTTRINLEDNQGAIDDYTQALNINPNYAQAYYGRGIARFNLGDKQGAIDDYTQALNINP 542
Query: 617 SNIECLYLRASCYHAIGEYREAV 639
+ + Y R ++G+ + AV
Sbjct: 543 NYAQAYYNRGIARTSLGDKQGAV 565
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 122/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A + G AI F+Q L + + +A RG AR + + AI DF + I N
Sbjct: 278 SRGVAHRDMGYLQKAIEDFNQTLHLNSAFFDAYTKRGLARYDLGDKQGAIDDFNQVITIN 337
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG L EAI D ++ + PN A H RG+ + D A++D
Sbjct: 338 PHFADGYAARGLVYCDLRNYQEAINDFNQTIRINPNYAQAYHNRGVARSQLGDKQGAIDD 397
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + SAY G+ S +G K A + + +AI++D N+ +A+ + L
Sbjct: 398 YTHSLNLNPKFASAYYNRGIIRSDLGSQKAAMDDYTQAIKIDPNYAQAYNNRGAIRTYLG 457
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N + A++ Q L +D +++ YH G L ++ AI D + L I+P+ + Y R
Sbjct: 458 NYQGAIDDYIQALRVDSNYAEVYHNWGTTRINLEDNQGAIDDYTQALNINPNYAQAYYGR 517
Query: 626 ASCYHAIGEYREAV 639
+G+ + A+
Sbjct: 518 GIARFNLGDKQGAI 531
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 130/266 (48%), Gaps = 12/266 (4%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
++SIS++ L RGIA+ N G AI F+Q L +P A RG A
Sbjct: 229 TQSISINSNLPQPYMERGIARTNLGDGQGAIDDFNQALDINPNLALAAYSRGVAHRDMGY 288
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L+ AI DF + + N + +A+ +RG AR LG+ AI D ++ + P+ AD RG
Sbjct: 289 LQKAIEDFNQTLHLNSAFFDAYTKRGLARYDLGDKQGAIDDFNQVITINPHFADGYAARG 348
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+V +++ A+ D + ++++ AY G+A S +G+ + A + + ++ L+ F
Sbjct: 349 LVYCDLRNYQEAINDFNQTIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTHSLNLNPKF 408
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + DL + + A++ Q + ID +++AY+ RG + LG ++ AI D
Sbjct: 409 ASAYYNRGIIRSDLGSQKAAMDDYTQAIKIDPNYAQAYNNRGAIRTYLGNYQGAIDDYIQ 468
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYR 636
L +D + A YH G R
Sbjct: 469 ALRVDSN-------YAEVYHNWGTTR 487
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 122/255 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RGIA+ + G AI+ F Q + + P+ + RG AR + + AI DF +A+
Sbjct: 209 LCRGIARSDLGDNRGAINDFTQSISINSNLPQPYMERGIARTNLGDGQGAIDDFNQALDI 268
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A RG A +G +AI+D ++ L D +RG+ + D A++
Sbjct: 269 NPNLALAAYSRGVAHRDMGYLQKAIEDFNQTLHLNSAFFDAYTKRGLARYDLGDKQGAID 328
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + ++ Y GL + Y++A + I+++ N+ +A+ + L
Sbjct: 329 DFNQVITINPHFADGYAARGLVYCDLRNYQEAINDFNQTIRINPNYAQAYHNRGVARSQL 388
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ + A++ L ++ +F+ AY+ RG++ LG K A+ D + + IDP+ +
Sbjct: 389 GDKQGAIDDYTHSLNLNPKFASAYYNRGIIRSDLGSQKAAMDDYTQAIKIDPNYAQAYNN 448
Query: 625 RASCYHAIGEYREAV 639
R + +G Y+ A+
Sbjct: 449 RGAIRTYLGNYQGAI 463
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Query: 366 KKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
++ + S++ I+ ++ ++RG A+ G AI F+Q L +P Y +A RG
Sbjct: 833 RQLAIEDFSQAIIIAYNYTESYINRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRG 892
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
A + E A DF++AIQ NP EA+ R LG+ AI+D ++AL N
Sbjct: 893 VAYTDLGDREWAKDDFSQAIQINPYYAEAYNNRAIVCYELGDHQGAIEDFNQALNINSNY 952
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ ++RG + ++ D A+ED + + L
Sbjct: 953 VEAYNKRGNIRYELGDRQGAIEDFNRALNL 982
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 10 RYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDSLL 63
RY L + + + V ++S A A R + ++C ++ ++S+AI ++
Sbjct: 793 RYELRDNQGAMEDFNHAVNINSNYAQAYNNR-GIVRICLGERQLAIEDFSQAI-----II 846
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
A +Y + NR + +L + I D ++AL ++P QAY +G A++ LG +E
Sbjct: 847 AYNY-TESYINRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDRE--- 902
Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNAND 183
W K D Q +++ A +R++ C Y++ + ++ LN N
Sbjct: 903 --WAKD---------DFSQAIQINPYYAEAYNNRAIVC-YELGDHQGAIEDFNQALNINS 950
Query: 184 KMSE 187
E
Sbjct: 951 NYVE 954
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 508 ACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A +++D E ++A+TYL G+A S +G+ + A ++I ++ N + + +L
Sbjct: 195 AVLEIDLE-ENAHTYLCRGIARSDLGDNRGAINDFTQSISINSNLPQPYMERGIARTNLG 253
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A++ Q L I+ + A + RG+ +G +KAI+D + L ++ + + R
Sbjct: 254 DGQGAIDDFNQALDINPNLALAAYSRGVAHRDMGYLQKAIEDFNQTLHLNSAFFDAYTKR 313
Query: 626 ASCYHAIGEYREAV 639
+ +G+ + A+
Sbjct: 314 GLARYDLGDKQGAI 327
>gi|66823735|ref|XP_645222.1| tetratricopeptide-like helical domain-containing protein
[Dictyostelium discoideum AX4]
gi|60473299|gb|EAL71245.1| tetratricopeptide-like helical domain-containing protein
[Dictyostelium discoideum AX4]
Length = 1050
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 137/231 (59%), Gaps = 1/231 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S+G VN G+Y AI +F I+ +P+ P +GRGT+ AF +L AI+DF+ AI+
Sbjct: 291 ISQGNTFVNAGQYEEAIELFTMIIDNNPLVPSLYLGRGTSNAFLGQLNEAINDFSRAIEL 350
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-NSADILHERGIVNFKFKDFNAAV 503
+ ++ +A+KRRGQ++ A EA++D ++A+ F+ + DI + RG+++++ +++ A+
Sbjct: 351 DNTSSDAYKRRGQSKVAKSMEQEALEDFNQAVAFDKEDDYDIYYNRGLLHYQMRNYERAL 410
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+D ++ +K A+ +GL L+ G +A +A +A+++D F + ++ Q ++D
Sbjct: 411 KDFKKVTSIEPSHKLAWNRIGLCLNVNGYPMEAYQAFTEALRIDPYFEASHTNIGQCWKD 470
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
L + + + + L I +S A HLRGLL G+H AIKD + L +
Sbjct: 471 LGKFDPSYQSFTKALEICPNYSNALHLRGLLFFNSGRHLDAIKDWNLFLKL 521
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 7/200 (3%)
Query: 313 SDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTR 372
+ +A L N +S++ DN SSD+ + R + M +E + + F
Sbjct: 329 TSNAFLGQLNEAINDFSRAIELDNTSSDAYKRRGQSKVAKSMEQEALEDFNQAVAF---- 384
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
K D +RG+ Y A+ F ++ +P + A G
Sbjct: 385 ---DKEDDYDIYYNRGLLHYQMRNYERALKDFKKVTSIEPSHKLAWNRIGLCLNVNGYPM 441
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A FTEA++ +P + GQ LG+ + Q +KALE PN ++ LH RG++
Sbjct: 442 EAYQAFTEALRIDPYFEASHTNIGQCWKDLGKFDPSYQSFTKALEICPNYSNALHLRGLL 501
Query: 493 NFKFKDFNAAVEDLSACVKL 512
F A++D + +KL
Sbjct: 502 FFNSGRHLDAIKDWNLFLKL 521
>gi|254417224|ref|ZP_05030969.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196176030|gb|EDX71049.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 600
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 147/274 (53%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +++ I+ DF + RG+A+ + Y AI+ F+Q ++ +P Y A RG AR
Sbjct: 262 AIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRGNAR 321
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + + AI+DF +AIQ NP A+ RG AR+ LG+ EAI D ++A++ P+ A
Sbjct: 322 SDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATA 381
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ D A+ D + ++++ + +AY GLA S++G+ + A + +AIQ
Sbjct: 382 YYNRGLARSDLGDDQGAIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALADYNQAIQ 441
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + A+ + DL + ++A+ Q + I+ + AY+ RG LG ++ AI
Sbjct: 442 INPDLAAAYNNRGLARSDLGDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAI 501
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + + I+P + + Y R + +G+Y+ A+
Sbjct: 502 ADFTQAIKINPGDADAYYNRGNARSDLGDYQGAI 535
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 138/254 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + Y AI+ F+Q ++ +P + A RG AR+ + + AI+DF +AIQ N
Sbjct: 248 NRGAARSDLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQIN 307
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG AR+ LG+ AI D ++A++ P+ A + RG D+ A+ D
Sbjct: 308 PDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIAD 367
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ ++ +AY GLA S +G+ + A + +AIQ++ + A+ + +L
Sbjct: 368 FAQAIQLNPDDATAYYNRGLARSDLGDDQGAIADYNQAIQINPDLAAAYNNRGLARSNLG 427
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + AL Q + I+ + AY+ RGL LG +++AI D + + I+P + + Y R
Sbjct: 428 DDQGALADYNQAIQINPDLAAAYNNRGLARSDLGDYQEAIADFNQAIKINPDDADAYYNR 487
Query: 626 ASCYHAIGEYREAV 639
+ +G+Y+ A+
Sbjct: 488 GNARSNLGDYQGAI 501
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 146/278 (52%), Gaps = 3/278 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +++ I+ D+ ++ RG+A+ N G Y AI+ + Q ++ +P A R
Sbjct: 88 NYQGAIADFNQAIKINPDYAIAYYNRGLARSNLGDYQGAIADYTQAIQLNPDDAIAYNNR 147
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G AR+ + E AI+DF +AIQ NP A+ RG AR+ LG+ AI D ++A++ P+
Sbjct: 148 GLARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIADYTQAIKINPD 207
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
AD + RG +D+ A+ D + ++L+ ++ AY+ G A S + +Y+ A
Sbjct: 208 YADAYNNRGNARSNLEDYQGAIADYTQAIQLNPDDAKAYSNRGAARSDLEDYQGAIADFN 267
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AIQ++ +F A+ + DL + + A+ Q + I+ ++ AY+ RG LG
Sbjct: 268 QAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRGNARSDLGDD 327
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI D + + ++P Y R + +G+Y EA+
Sbjct: 328 QGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAI 365
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 134/254 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N G Y AI+ F Q ++ +P A RG AR+ + + AI+D+T+AI+ N
Sbjct: 146 NRGLARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIADYTQAIKIN 205
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG AR+ L + AI D ++A++ P+ A RG +D+ A+ D
Sbjct: 206 PDYADAYNNRGNARSNLEDYQGAIADYTQAIQLNPDDAKAYSNRGAARSDLEDYQGAIAD 265
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ + AY G+A S + +Y+ A +AIQ++ ++ A+ + DL
Sbjct: 266 FNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRGNARSDLG 325
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+ Q + ++ F+ AY+ RG LG +++AI D + + ++P + Y R
Sbjct: 326 DDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATAYYNR 385
Query: 626 ASCYHAIGEYREAV 639
+G+ + A+
Sbjct: 386 GLARSDLGDDQGAI 399
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 128/231 (55%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ + G Y AI+ + Q +K +P Y +A RG AR+ + + AI+D+T+AIQ N
Sbjct: 180 NRGLARSDLGDYQGAIADYTQAIKINPDYADAYNNRGNARSNLEDYQGAIADYTQAIQLN 239
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG AR+ L + AI D ++A++ P+ A + RG+ +D+ A+ D
Sbjct: 240 PDDAKAYSNRGAARSDLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIAD 299
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ + +AY G A S +G+ + A +AIQL+ +F A+ + +L
Sbjct: 300 FNQAIQINPDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLG 359
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ E+A+ Q + ++ + AY+ RGL LG + AI D + + I+P
Sbjct: 360 DYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDDQGAIADYNQAIQINP 410
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 127/243 (52%), Gaps = 3/243 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +++ ++ DF + RG A+ N G Y AI+ F Q ++ +P A RG AR
Sbjct: 330 AIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLAR 389
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + + AI+D+ +AIQ NP A+ RG AR+ LG+ A+ D ++A++ P+ A
Sbjct: 390 SDLGDDQGAIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALADYNQAIQINPDLAAA 449
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ D+ A+ D + +K++ ++ AY G A S++G+Y+ A +AI+
Sbjct: 450 YNNRGLARSDLGDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAIADFTQAIK 509
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ +A+ + DL + + A+ Q + ++ ++ AY RGL LG KA+
Sbjct: 510 INPGDADAYYNRGNARSDLGDYQGAIADYNQAIKLNPDYAAAYGNRGLAYRDLGDKPKAL 569
Query: 606 KDL 608
+D
Sbjct: 570 EDF 572
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 138/269 (51%), Gaps = 3/269 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +++ I+ D+ +RG A+ + G AI+ F+Q ++ +P + A RG AR
Sbjct: 296 AIADFNQAIQINPDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNAR 355
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + E AI+DF +AIQ NP A+ RG AR+ LG+ AI D ++A++ P+ A
Sbjct: 356 SNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDDQGAIADYNQAIQINPDLAAA 415
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ D A+ D + ++++ + +AY GLA S +G+Y++A +AI+
Sbjct: 416 YNNRGLARSNLGDDQGALADYNQAIQINPDLAAAYNNRGLARSDLGDYQEAIADFNQAIK 475
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + +A+ + +L + + A+ Q + I+ + AY+ RG LG ++ AI
Sbjct: 476 INPDDADAYYNRGNARSNLGDYQGAIADFTQAIKINPGDADAYYNRGNARSDLGDYQGAI 535
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGE 634
D + + ++P R Y +G+
Sbjct: 536 ADYNQAIKLNPDYAAAYGNRGLAYRDLGD 564
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 109/192 (56%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ + G AI+ ++Q ++ +P A RG AR+ + + A++D+ +AIQ N
Sbjct: 384 NRGLARSDLGDDQGAIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALADYNQAIQIN 443
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG AR+ LG+ EAI D ++A++ P+ AD + RG D+ A+ D
Sbjct: 444 PDLAAAYNNRGLARSDLGDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAIAD 503
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + AY G A S +G+Y+ A + +AI+L+ ++ A+G+ Y+DL
Sbjct: 504 FTQAIKINPGDADAYYNRGNARSDLGDYQGAIADYNQAIKLNPDYAAAYGNRGLAYRDLG 563
Query: 566 NSEKALECLQQV 577
+ KALE +Q
Sbjct: 564 DKPKALEDFRQA 575
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 34/280 (12%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G Y AI+ ++Q L+ P E R A + AI+DF +AI+ NP A+
Sbjct: 52 KGDYQGAIADYNQALQLSPNNAEVYYLRANAYYQLENYQGAIADFNQAIKINPDYAIAYY 111
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG AR+ LG+ AI D ++A++ P+ A + RG+ D+ A+ D + ++L+
Sbjct: 112 NRGLARSNLGDYQGAIADYTQAIQLNPDDAIAYNNRGLARSNLGDYEEAIADFAQAIQLN 171
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--------------GHLTQ 559
++ +AY GLA S +G+Y+ A + +AI+++ ++ +A+ G +
Sbjct: 172 PDDATAYYNRGLARSDLGDYQGAIADYTQAIKINPDYADAYNNRGNARSNLEDYQGAIAD 231
Query: 560 FYQ--------------------DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ Q DL + + A+ Q + I+ F+ AY+ RG+ L
Sbjct: 232 YTQAIQLNPDDAKAYSNRGAARSDLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDLE 291
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ AI D + + I+P Y R + +G+ + A+
Sbjct: 292 DYQGAIADFNQAIQINPDYANAYYNRGNARSDLGDDQGAI 331
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 15/193 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N G A++ ++Q ++ +P A RG AR+ + + AI+DF +AI+ N
Sbjct: 418 NRGLARSNLGDDQGALADYNQAIQINPDLAAAYNNRGLARSDLGDYQEAIADFNQAIKIN 477
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG AR+ LG+ AI D ++A++ P AD + RG D+ A+ D
Sbjct: 478 PDDADAYYNRGNARSNLGDYQGAIADFTQAIKINPGDADAYYNRGNARSDLGDYQGAIAD 537
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ + +AY GLA +G+ KA LE + +Q
Sbjct: 538 YNQAIKLNPDYAAAYGNRGLAYRDLGDKPKA--------------LEDFRQAATLFQQQG 583
Query: 566 NSEKALECLQQVL 578
N+E + +QQ++
Sbjct: 584 NTE-GYQSIQQII 595
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A+ N G Y AI+ F Q +K +P +A RG AR+ + + AI+D+ +
Sbjct: 481 ADAYYNRGNARSNLGDYQGAIADFTQAIKINPGDADAYYNRGNARSDLGDYQGAIADYNQ 540
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
AI+ NP A+ RG A LG+ +A++D +A
Sbjct: 541 AIKLNPDYAAAYGNRGLAYRDLGDKPKALEDFRQA 575
>gi|67480111|ref|XP_655416.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
gi|56472551|gb|EAL50030.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
gi|449707388|gb|EMD47059.1| tetratricopeptide repeatcontaining protein tpr [Entamoeba
histolytica KU27]
Length = 890
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 131/242 (54%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+ I +D +++G VN GK AI+ FDQ+LK P +GRG+A+A +L+ A+
Sbjct: 218 TNDIELDREIAKGYLYVNTGKLKEAIAHFDQLLKNHPNVLAGYLGRGSAKAMLGDLQKAL 277
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+DF A++ + G+A+KRRGQ + ALG++ A++D +KA+E P D +RG
Sbjct: 278 TDFNLAVKKDSKCGDAYKRRGQVKLALGQTQSALEDFNKAIELTPEEGDCYRQRGSAYHA 337
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
F+ A ED+ +KL + + L L + +G ++ + +AI +++E +
Sbjct: 338 LGIFDKAAEDIKKSIKLIPGDATLLNELALCYNGMGLVDESINTYTRAINTKEDYVEPYI 397
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
HL Q Y+D+ +A + L++ + + +Y++ +L G+HK+A+ LS L I
Sbjct: 398 HLGQLYRDIGCYVRAKQLLEKAMKLAPTNHLSYYVMANVLASAGRHKEALPLLSRSLSIC 457
Query: 616 PS 617
P
Sbjct: 458 PP 459
>gi|407039100|gb|EKE39457.1| TPR repeat protein [Entamoeba nuttalli P19]
Length = 890
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 131/242 (54%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+ I +D +++G VN GK AI+ FDQ+LK P +GRG+A+A +L+ A+
Sbjct: 218 TNDIELDREIAKGYLYVNTGKLKEAITHFDQLLKNHPNVLAGYLGRGSAKAMLGDLQKAL 277
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+DF A++ + G+A+KRRGQ + ALG++ A++D +KA+E P D +RG
Sbjct: 278 TDFNLAVKKDNKCGDAYKRRGQVKLALGQTQSALEDFNKAIELTPEEGDCYRQRGSAYHA 337
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
F+ A ED+ +KL + + L L + +G ++ + +AI +++E +
Sbjct: 338 LGIFDKAAEDIKKSIKLIPGDATLLNELALCYNGMGLVDESINTYTRAINTKEDYVEPYI 397
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
HL Q Y+D+ +A + L++ + + +Y++ +L G+HK+A+ LS L I
Sbjct: 398 HLGQLYRDIGCYVRAKQLLEKAMKLAPTNHLSYYVMANVLASAGRHKEALPLLSRSLSIC 457
Query: 616 PS 617
P
Sbjct: 458 PP 459
>gi|302840983|ref|XP_002952037.1| hypothetical protein VOLCADRAFT_121038 [Volvox carteri f.
nagariensis]
gi|300262623|gb|EFJ46828.1| hypothetical protein VOLCADRAFT_121038 [Volvox carteri f.
nagariensis]
Length = 1509
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 137/268 (51%), Gaps = 33/268 (12%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA-AISDFTEAIQSNPS 447
+ Q+N G A +I D+++ P REL A A+ DF AI+ P
Sbjct: 778 VTQINSGNIVEAEAILDKVIAATP----------------RELGARAVEDFNVAIEVEPR 821
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEP---------NSADILHERGIVNFKFKD 498
++WKRRGQAR+ALG+ A+ DL KA++ P + A+ E+G++ K +D
Sbjct: 822 YADSWKRRGQARSALGDHEGALTDLQKAIDLAPLFGGADSASSRAECWMEKGMIYQKMRD 881
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A +L VKLD N A+ LGL +S G+ + A+ KA++L+ EAW ++
Sbjct: 882 YRRACRELQQAVKLDPTNSQAWNVLGLCSTSQGDIRDGVRAYEKAVELNPRLKEAWVNMG 941
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYH-LRGL--LLHGLGQHKKAIKDLSSGLGI- 614
Q ++ +++A L + L +D + H LR L + G+H AIK L + +
Sbjct: 942 QALKEEGRTKEAERVLLKALTLDAPDQPSVHVLRVLAQMKQQKGEHAAAIKLLDRAIPVA 1001
Query: 615 ---DPSNIECLYLRASCYHAIGEYREAV 639
D IE LYLRA C+HA+G REAV
Sbjct: 1002 EAKDEQVIELLYLRAICHHALGAIREAV 1029
>gi|434402457|ref|YP_007145342.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
gi|428256712|gb|AFZ22662.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
Length = 496
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 140/274 (51%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T ++ +I+ +F +RG A+ G AI+ +DQ +K +P + A RG AR
Sbjct: 116 AITDYDQAININPNFADAYYNRGNARAELGDMPGAITDYDQAIKINPNFAVAYYNRGNAR 175
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A +++ AI+DF +AI NP+ EA+ RG RA LG+ AI DL++A++ PN A
Sbjct: 176 AKLGDMQGAITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAKA 235
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG + K D A+ DL+ +K++ AY G A + +G+ + A +AI+
Sbjct: 236 YYNRGTLRGKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAIK 295
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ N + + L + + A+ Q + I+ ++ AY RG + LG + AI
Sbjct: 296 TNPNDPLPYNNRANARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAI 355
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + + I+P+ + + R + + +G+ + A+
Sbjct: 356 TDYNQAININPNYADAYFNRGNARYKLGDMQGAI 389
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 134/267 (50%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+ + + D L+RG A+ G + I+ +DQ +K +P +A RG ARA ++
Sbjct: 55 VKREGNTLTDTLLNRGNARDKLGNKQAQITDYDQAIKTNPNDAQAYYNRGNARAELGDMP 114
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+D+ +AI NP+ +A+ RG ARA LG+ AI D +A++ PN A + RG
Sbjct: 115 GAITDYDQAININPNFADAYYNRGNARAELGDMPGAITDYDQAIKINPNFAVAYYNRGNA 174
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
K D A+ D + + ++ AYT G + +G+ + A +AI+++ NF +
Sbjct: 175 RAKLGDMQGAITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAK 234
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
A+ + L + + A+ L Q + I+ +++AY RG LG + AI D + +
Sbjct: 235 AYYNRGTLRGKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAI 294
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAV 639
+P++ RA+ +G+ + A+
Sbjct: 295 KTNPNDPLPYNNRANARAKLGDMQGAI 321
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 136/274 (49%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T ++ I+ +F ++ RG A+ G AI+ F+Q + +P Y EA RGT R
Sbjct: 150 AITDYDQAIKINPNFAVAYYNRGNARAKLGDMQGAITDFNQAININPNYAEAYTNRGTLR 209
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A +++ AI+D +AI+ NP+ +A+ RG R LG+ AI DL++A++ PN +
Sbjct: 210 AELGDMQGAITDLNQAIKINPNFAKAYYNRGTLRGKLGDMQGAITDLNQAIKINPNYTEA 269
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG + D A+ D + +K + + Y A + +G+ + A +AI
Sbjct: 270 YGNRGNARAELGDMQTAITDFNQAIKTNPNDPLPYNNRANARAKLGDMQGAITDFNQAIN 329
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ N+ A+ + L + + A+ Q + I+ ++ AY RG + LG + AI
Sbjct: 330 INPNYANAYKNRGFVRAKLGDMQGAITDYNQAININPNYADAYFNRGNARYKLGDMQGAI 389
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + + I+P+ + + R + + +G+ + A+
Sbjct: 390 TDYNQAININPNFADAYFNRGNARYKLGDMQGAI 423
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 3/242 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T ++++ I+ +F +RG + G AI+ +Q +K +P Y EA RG AR
Sbjct: 218 AITDLNQAIKINPNFAKAYYNRGTLRGKLGDMQGAITDLNQAIKINPNYTEAYGNRGNAR 277
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A +++ AI+DF +AI++NP+ + R ARA LG+ AI D ++A+ PN A+
Sbjct: 278 AELGDMQTAITDFNQAIKTNPNDPLPYNNRANARAKLGDMQGAITDFNQAININPNYANA 337
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG V K D A+ D + + ++ AY G A +G+ + A + +AI
Sbjct: 338 YKNRGFVRAKLGDMQGAITDYNQAININPNYADAYFNRGNARYKLGDMQGAITDYNQAIN 397
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ NF +A+ + L + + A+ Q + I+ F+ AY RG+ LG + AI
Sbjct: 398 INPNFADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAYLNRGIASLALGDKQGAI 457
Query: 606 KD 607
D
Sbjct: 458 AD 459
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 136/274 (49%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T +++ +I+ ++ +RG + G AI+ +Q +K +P + +A RGT R
Sbjct: 184 AITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAKAYYNRGTLR 243
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+++ AI+D +AI+ NP+ EA+ RG ARA LG+ AI D ++A++ PN
Sbjct: 244 GKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAIKTNPNDPLP 303
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ R K D A+ D + + ++ +AY G + +G+ + A + +AI
Sbjct: 304 YNNRANARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAITDYNQAIN 363
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ N+ +A+ + L + + A+ Q + I+ F+ AY RG + LG + AI
Sbjct: 364 INPNYADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAYFNRGNARYKLGDMQGAI 423
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + + I+P+ + R A+G+ + A+
Sbjct: 424 TDYNQAININPNFADAYLNRGIASLALGDKQGAI 457
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T +++ +I+ ++ +RG + G AI+ ++Q + +P Y +A RG AR
Sbjct: 320 AITDFNQAININPNYANAYKNRGFVRAKLGDMQGAITDYNQAININPNYADAYFNRGNAR 379
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+++ AI+D+ +AI NP+ +A+ RG AR LG+ AI D ++A+ PN AD
Sbjct: 380 YKLGDMQGAITDYNQAININPNFADAYFNRGNARYKLGDMQGAITDYNQAININPNFADA 439
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKE--NKSAY 520
RGI + D A+ D V L ++ NK +Y
Sbjct: 440 YLNRGIASLALGDKQGAIADTQQAVDLFQQQGNKESY 476
>gi|291569240|dbj|BAI91512.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 1337
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 137/279 (49%), Gaps = 3/279 (1%)
Query: 364 RNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
R+ + + + K+ D+ L RG A N G+Y AIS DQ +K P Y EA
Sbjct: 157 RDWRGAIFSLEKAIEFKPDYHEAWLVRGSALGNLGEYEKAISSCDQAIKFKPDYHEAWAN 216
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A ++ E E AIS +AI+ P EAW RG A LGE +AI +A++F+P
Sbjct: 217 RGVALSYLGEYEKAISSCDQAIKFKPDLHEAWLVRGSALGNLGEYEKAISSYDQAIKFKP 276
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + + RG ++ A+ +K + A+ G+ALS +GEY+KA ++
Sbjct: 277 DLHEAWNNRGNALANLGEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYLGEYEKAISSY 336
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI+ + EAW + +L EKA+ Q + + +A++ RGL L LG+
Sbjct: 337 DQAIKFKPDLHEAWNNRGNALANLGEYEKAISSYDQAIKFKPDYHEAWYNRGLALGNLGE 396
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++KAI + P E + R + +GEY +A+
Sbjct: 397 YEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAI 435
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 129/255 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A N G+Y AIS +DQ +K P EA RG A A E E AIS +AI+
Sbjct: 249 LVRGSALGNLGEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSCDQAIKF 308
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW RG A + LGE +AI +A++F+P+ + + RG ++ A+
Sbjct: 309 KPDYHEAWLVRGVALSYLGEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAIS 368
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K + A+ GLAL ++GEY+KA ++ +AI+ ++ EAW + DL
Sbjct: 369 SYDQAIKFKPDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDL 428
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
EKA+ Q + + +A+ +RG+ L LG+H+KAI + I P E
Sbjct: 429 GEYEKAISSYDQAIKFKPDYHEAWFVRGVALSYLGEHEKAISSYDQAIKIKPDLHEAWSN 488
Query: 625 RASCYHAIGEYREAV 639
R S +GEY +A+
Sbjct: 489 RGSALSHLGEYEKAI 503
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 128/255 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A + G+Y AIS +DQ +K P Y EA RG A ++ E E AIS + +AI+
Sbjct: 419 FNRGLALYDLGEYEKAISSYDQAIKFKPDYHEAWFVRGVALSYLGEHEKAISSYDQAIKI 478
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW RG A + LGE +AI +A++F+P+ + RG+ ++ A+
Sbjct: 479 KPDLHEAWSNRGSALSHLGEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAIS 538
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K + A++ G ALS +GEY+KA ++ +AI+ + +AW + L
Sbjct: 539 SYDQAIKFKPDYHEAWSNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSNRGVALSYL 598
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
EKA+ Q + F +A+ RGL L LG+++KAI + P E
Sbjct: 599 GEYEKAISSYDQAIKFKPDFHEAWSNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSN 658
Query: 625 RASCYHAIGEYREAV 639
R +GEY +A+
Sbjct: 659 RGGALSHLGEYEKAI 673
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 130/254 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G+Y AIS DQ +K P EA + RG+A E E AIS + +AI+
Sbjct: 216 NRGVALSYLGEYEKAISSCDQAIKFKPDLHEAWLVRGSALGNLGEYEKAISSYDQAIKFK 275
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A A LGE +AI +A++F+P+ + RG+ ++ A+
Sbjct: 276 PDLHEAWNNRGNALANLGEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYLGEYEKAISS 335
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A+ G AL+++GEY+KA ++ +AI+ ++ EAW + +L
Sbjct: 336 YDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSYDQAIKFKPDYHEAWYNRGLALGNLG 395
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
EKA+ Q + + +A+ RGL L+ LG+++KAI + P E ++R
Sbjct: 396 EYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAISSYDQAIKFKPDYHEAWFVR 455
Query: 626 ASCYHAIGEYREAV 639
+GE+ +A+
Sbjct: 456 GVALSYLGEHEKAI 469
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 125/255 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+A G+Y AIS +DQ +K P EA RG A A E E AIS + +AI+
Sbjct: 317 LVRGVALSYLGEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSYDQAIKF 376
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW RG A LGE +AI +A++F+P+ + RG+ + ++ A+
Sbjct: 377 KPDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAIS 436
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K + A+ G+ALS +GE++KA ++ +AI++ + EAW + L
Sbjct: 437 SYDQAIKFKPDYHEAWFVRGVALSYLGEHEKAISSYDQAIKIKPDLHEAWSNRGSALSHL 496
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
EKA+ Q + +A+ RGL L LG+++KAI + P E
Sbjct: 497 GEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSN 556
Query: 625 RASCYHAIGEYREAV 639
R +GEY +A+
Sbjct: 557 RGGALSDLGEYEKAI 571
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 126/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G+Y AIS +DQ +K P Y EA RG A E E AIS + +AI+
Sbjct: 386 NRGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAISSYDQAIKFK 445
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A + LGE +AI +A++ +P+ + RG ++ A+
Sbjct: 446 PDYHEAWFVRGVALSYLGEHEKAISSYDQAIKIKPDLHEAWSNRGSALSHLGEYEKAISS 505
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K ++ A+ GLALS +GEY+KA ++ +AI+ ++ EAW + DL
Sbjct: 506 YDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALSDLG 565
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
EKA+ Q + +A+ RG+ L LG+++KAI + P E R
Sbjct: 566 EYEKAISSYDQAIKFKPDDHQAWSNRGVALSYLGEYEKAISSYDQAIKFKPDFHEAWSNR 625
Query: 626 ASCYHAIGEYREAV 639
+GEY +A+
Sbjct: 626 GLALSYLGEYEKAI 639
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 124/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+Y AIS +DQ +K P Y EA RG A E E AIS + +AI+
Sbjct: 352 NRGNALANLGEYEKAISSYDQAIKFKPDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFK 411
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LGE +AI +A++F+P+ + RG+ + A+
Sbjct: 412 PDYHEAWFNRGLALYDLGEYEKAISSYDQAIKFKPDYHEAWFVRGVALSYLGEHEKAISS 471
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + A++ G ALS +GEY+KA ++ +AI+ + EAW + L
Sbjct: 472 YDQAIKIKPDLHEAWSNRGSALSHLGEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLG 531
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
EKA+ Q + + +A+ RG L LG+++KAI + P + + R
Sbjct: 532 EYEKAISSYDQAIKFKPDYHEAWSNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSNR 591
Query: 626 ASCYHAIGEYREAV 639
+GEY +A+
Sbjct: 592 GVALSYLGEYEKAI 605
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G+Y AIS +DQ +K P EA RG A ++ E E AIS + +AI+
Sbjct: 488 NRGSALSHLGEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSYDQAIKFK 547
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A + LGE +AI +A++F+P+ RG+ ++ A+
Sbjct: 548 PDYHEAWSNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSNRGVALSYLGEYEKAISS 607
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A++ GLALS +GEY+KA ++ +AI+ ++ EAW + L
Sbjct: 608 YDQAIKFKPDFHEAWSNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALSHLG 667
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRG 592
EKA+ Q + F +A+ RG
Sbjct: 668 EYEKAISSYDQAIKFKPDFHQAWSNRG 694
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G+Y AIS +DQ +K P Y EA RG A + E E AIS + +AI+
Sbjct: 624 NRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALSHLGEYEKAISSYDQAIKFK 683
Query: 446 PSAGEAWKRRGQARA 460
P +AW RG A A
Sbjct: 684 PDFHQAWSNRGNAAA 698
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
L + K I D+ ++ + A R + L +L + KAI D + ++ +
Sbjct: 224 LGEYEKAISSCDQAIKFKPDLHEAWLVRG--SALGNLGEYEKAISSYDQAIKFKPDLHEA 281
Query: 73 CN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N R + L ++ I CD+A++ P +A++++G A S LG E+A+S Y+
Sbjct: 282 WNNRGNALANLGEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYLGEYEKAIS----SYD 337
Query: 132 HALHQSADLKQ 142
A+ DL +
Sbjct: 338 QAIKFKPDLHE 348
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
NR S L ++ I CD+A++ P L +A++++G A LG E+A+S Y+
Sbjct: 215 ANRGVALSYLGEYEKAISSCDQAIKFKPDLHEAWLVRGSALGNLGEYEKAIS----SYDQ 270
Query: 133 ALHQSADLKQ 142
A+ DL +
Sbjct: 271 AIKFKPDLHE 280
>gi|194578961|ref|NP_001124099.1| tetratricopeptide repeat protein 13 precursor [Danio rerio]
gi|190338937|gb|AAI63293.1| Zgc:194598 [Danio rerio]
Length = 826
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 141/260 (54%), Gaps = 6/260 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFT 439
L+ G + G Y AI F +L+ DP A+ GRG A ++ Q + + A+ + +
Sbjct: 113 LAIGYVLIGNGLYDEAIKHFSLLLQGDPELVSAIYGRGIAYGKKSLQDIKNADLALYELS 172
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I P+ E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+
Sbjct: 173 RVIALEPNRPEVYEQRAEILSPLGRISEALLDLTKAIQLQP-SARLYRHRGTLLFISEDY 231
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AA+ED ++L K A Y GL G K+A E +A++L +F++A+ L Q
Sbjct: 232 MAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIEVFKEALKLKSDFIDAYKSLGQ 291
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
Y++L + E A+E Q+ L +D+ ++ LRG++L+ G ++AI + L ++P N
Sbjct: 292 AYRELGDIENAMESFQKALLLDQNHIQSLQLRGMMLYHHGSLQEAIGNFKRCLQLEPYNE 351
Query: 620 ECLYLRASCYHAIGEYREAV 639
C Y++ + A+G++ E +
Sbjct: 352 VCQYMKGLSHVAMGQFYEGI 371
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Y +A+ F Q L+ P A++ +G + L+ AI F EA++
Sbjct: 221 RGTLLFISEDYMAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIEVFKEALKLKS 280
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG+ A++ KAL + N L RG++ + A+ +
Sbjct: 281 DFIDAYKSLGQAYRELGDIENAMESFQKALLLDQNHIQSLQLRGMMLYHHGSLQEAIGNF 340
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 341 KRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 378
>gi|348538370|ref|XP_003456665.1| PREDICTED: tetratricopeptide repeat protein 13 [Oreochromis
niloticus]
Length = 826
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 140/260 (53%), Gaps = 6/260 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFT 439
L+ G + G Y AI F +L+ DP A+ GRG A ++ Q + + A+ +
Sbjct: 113 LAIGYVLIGNGLYDEAIKHFSLLLQGDPELVSAIYGRGIAYGKKSLQDIKNADLALYELN 172
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I PS E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+
Sbjct: 173 RVITLEPSWPEVYEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLLFISEDY 231
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AA+ED ++L K A Y GL G K+A E +A++L +F++A+ L Q
Sbjct: 232 VAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGMLKEAIETFKEALKLKSDFIDAYKSLGQ 291
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
Y++L + E A+E Q+ L +++ ++ LRG++L+ G ++AI + L ++P N
Sbjct: 292 AYRELGDFESAMESFQKALMLNQNHIQSLQLRGMMLYHHGSLQEAIGNFKRCLQLEPYNE 351
Query: 620 ECLYLRASCYHAIGEYREAV 639
C Y++ + A+G++ E +
Sbjct: 352 VCQYMKGLSHVAMGQFYEGI 371
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Y +A+ F Q L+ P A++ +G + L+ AI F EA++
Sbjct: 221 RGTLLFISEDYVAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGMLKEAIETFKEALKLKS 280
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG+ A++ KAL N L RG++ + A+ +
Sbjct: 281 DFIDAYKSLGQAYRELGDFESAMESFQKALMLNQNHIQSLQLRGMMLYHHGSLQEAIGNF 340
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 341 KRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 378
>gi|268325019|emb|CBH38607.1| conserved hypothetical protein, containing tetratricopeptide
repeats [uncultured archaeon]
Length = 425
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 135/254 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + +Y AI F++ ++ DP Y A RGTA + ++ E AI DF + I+
Sbjct: 138 NRGTAYSDLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELI 197
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG L + AI+D +K +E +PNSA + RG+ K + A+ED
Sbjct: 198 PDYPFAYSNRGLTYDNLKQYERAIEDFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIED 257
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + AY GL +++ +Y++A E K I+LD N A+ + Y+ L
Sbjct: 258 FNKTIELIPNHTFAYNNRGLTYNNLKQYERAIEDFNKTIELDPNSAAAYNNRGNAYRKLE 317
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+E + + +D ++ +Y+ RGL L Q+++AI+D + + +DP++ R
Sbjct: 318 EYERAIEDFNKTIELDSNYAGSYYNRGLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNR 377
Query: 626 ASCYHAIGEYREAV 639
+ + +G+Y A+
Sbjct: 378 GNAFKDLGQYERAI 391
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 137/271 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C ++ + S +RG+ +Y AI F++ ++ P + A I RG A
Sbjct: 53 CFDKVIELNPNSAGSYYNRGLVYKILKQYERAIEDFNKTIELIPTFAGAYINRGDAYKNL 112
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ E AI DF + I+ +P+ A+ RG A + L + AI+D +K +E +PN A +
Sbjct: 113 KQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELDPNYALAYNN 172
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG K + A+ED + ++L + AY+ GL ++ +Y++A E K I+LD
Sbjct: 173 RGTAYSDLKQYERAIEDFNKTIELIPDYPFAYSNRGLTYDNLKQYERAIEDFNKTIELDP 232
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N A+ + Y +L E+A+E + + + + AY+ RGL + L Q+++AI+D
Sbjct: 233 NSAAAYNNRGLTYDNLKQYERAIEDFNKTIELIPNHTFAYNNRGLTYNNLKQYERAIEDF 292
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + +DP++ R + Y + EY A+
Sbjct: 293 NKTIELDPNSAAAYNNRGNAYRKLEEYERAI 323
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 122/236 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + +Y AI F++ ++ P YP A RG ++ E AI DF + I+ +
Sbjct: 172 NRGTAYSDLKQYERAIEDFNKTIELIPDYPFAYSNRGLTYDNLKQYERAIEDFNKTIELD 231
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P++ A+ RG L + AI+D +K +E PN + RG+ K + A+ED
Sbjct: 232 PNSAAAYNNRGLTYDNLKQYERAIEDFNKTIELIPNHTFAYNNRGLTYNNLKQYERAIED 291
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD + +AY G A + EY++A E K I+LD N+ ++ + Y DL
Sbjct: 292 FNKTIELDPNSAAAYNNRGNAYRKLEEYERAIEDFNKTIELDSNYAGSYYNRGLTYDDLK 351
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
E+A+E + + +D + Y RG LGQ+++AI+D + + +DP++ +
Sbjct: 352 QYERAIEDFNKTIELDPNSAVIYTNRGNAFKDLGQYERAIEDYNKAIELDPNDTDA 407
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 127/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++ I G+Y AI FD++++ +P + RG ++ E AI DF + I+
Sbjct: 36 NKAIGFAMSGEYKKAIECFDKVIELNPNSAGSYYNRGLVYKILKQYERAIEDFNKTIELI 95
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A L + AI+D +K +E +PN A + RG K + A+ED
Sbjct: 96 PTFAGAYINRGDAYKNLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIED 155
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD AY G A S + +Y++A E K I+L ++ A+ + Y +L
Sbjct: 156 FNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELIPDYPFAYSNRGLTYDNLK 215
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+E + + +D + AY+ RGL L Q+++AI+D + + + P++ R
Sbjct: 216 QYERAIEDFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIEDFNKTIELIPNHTFAYNNR 275
Query: 626 ASCYHAIGEYREAV 639
Y+ + +Y A+
Sbjct: 276 GLTYNNLKQYERAI 289
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N +Y AI F++ ++ DP A RG ++ E AI DF + I+
Sbjct: 206 NRGLTYDNLKQYERAIEDFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIEDFNKTIELI 265
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG L + AI+D +K +E +PNSA + RG K +++ A+ED
Sbjct: 266 PNHTFAYNNRGLTYNNLKQYERAIEDFNKTIELDPNSAAAYNNRGNAYRKLEEYERAIED 325
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD +Y GL + +Y++A E K I+LD N + + ++DL
Sbjct: 326 FNKTIELDSNYAGSYYNRGLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNRGNAFKDLG 385
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
E+A+E + + +D + AY R L L L + +
Sbjct: 386 QYERAIEDYNKAIELDPNDTDAYENRELALSKLKEQE 422
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 1/199 (0%)
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I S +AGE W + A GE +AI+ K +E PNSA + RG+V K +
Sbjct: 24 PIVSAETAGE-WHNKAIGFAMSGEYKKAIECFDKVIELNPNSAGSYYNRGLVYKILKQYE 82
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ED + ++L AY G A ++ +Y++A E K I+LD N+ A+ +
Sbjct: 83 RAIEDFNKTIELIPTFAGAYINRGDAYKNLKQYERAIEDFNKTIELDPNYALAYNNRGTA 142
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
Y DL E+A+E + + +D ++ AY+ RG L Q+++AI+D + + + P
Sbjct: 143 YSDLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELIPDYPF 202
Query: 621 CLYLRASCYHAIGEYREAV 639
R Y + +Y A+
Sbjct: 203 AYSNRGLTYDNLKQYERAI 221
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSY 67
L + + I + ++ + +D A+A R + ++ +++K I LDS A SY
Sbjct: 282 LKQYERAIEDFNKTIELDPNSAAAYNNRGNAYRKLEEYERAIEDFNKTIE-LDSNYAGSY 340
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR Y L+ ++ I D +K ++LDP Y +G AF LG+ E A+ +
Sbjct: 341 -----YNRGLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNRGNAFKDLGQYERAIEDYN 395
Query: 128 KGYE 131
K E
Sbjct: 396 KAIE 399
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRI------LDSLLAQS 66
L + + I + ++ + + A A R + K +L+ + +AI LD A +
Sbjct: 78 LKQYERAIEDFNKTIELIPTFAGAYINRGDAYK--NLKQYERAIEDFNKTIELDPNYALA 135
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y NR YS L+ ++ I D +K ++LDP AY +G A+S L + E A+ +
Sbjct: 136 YN-----NRGTAYSDLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDF 190
Query: 127 EKGYE 131
K E
Sbjct: 191 NKTIE 195
>gi|384210167|ref|YP_005595887.1| hypothetical protein Bint_2713 [Brachyspira intermedia PWS/A]
gi|343387817|gb|AEM23307.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 853
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 126/224 (56%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA+ Y AI F++++K +P +A + RG A+++ E E AI DF E I+
Sbjct: 195 FNRGIAKTKLEIYEEAIKDFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAIKDFNEVIKL 254
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ +A+ RG A+ G+ E I+D +KA+E PN+ + RGI K + + AV
Sbjct: 255 NPNNEKAYLARGIAKIESGKHEEVIEDFNKAIELNPNNENAYFNRGIAKAKLEKYEEAVV 314
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +KL+K N+ Y G+ + +Y++A E KAI L++++ +A+ + +
Sbjct: 315 DFNKAIKLNKNNEKTYFSRGITKVKLEKYEEAIEDFNKAIGLNKSYNKAYFNRGILKINF 374
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++A+ + + ++K ++KAY RG+L G++K+AI D
Sbjct: 375 GKYKEAINDFNKAIGLNKNYNKAYFNRGILKTNFGKYKEAINDF 418
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 34/289 (11%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGI +V KY AI F++I+K +P G A+A + E AI DF E I+
Sbjct: 93 FNRGITKVKLEKYEEAIEDFNKIIKLNPKNERGYFNIGFAKASLEKYEEAIKDFNEVIKL 152
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N EA+ RG A+ L + EAI+D +K+++ + + RGI K + + A++
Sbjct: 153 NTKNEEAYFFRGLAKVKLEKDKEAIEDFNKSIKLNSKNEEAYFNRGIAKTKLEIYEEAIK 212
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA--------------EEAHL--------- 541
D + +KL+ N+ AY G+A S + EY++A E+A+L
Sbjct: 213 DFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAIKDFNEVIKLNPNNEKAYLARGIAKIES 272
Query: 542 -----------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
KAI+L+ N A+ + L E+A+ + + ++K K Y
Sbjct: 273 GKHEEVIEDFNKAIELNPNNENAYFNRGIAKAKLEKYEEAVVDFNKAIKLNKNNEKTYFS 332
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG+ L ++++AI+D + +G++ S + + R G+Y+EA+
Sbjct: 333 RGITKVKLEKYEEAIEDFNKAIGLNKSYNKAYFNRGILKINFGKYKEAI 381
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 137/286 (47%), Gaps = 34/286 (11%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A+ + KY AI F++++K + EA RG A+ + + AI DF ++I+ N
Sbjct: 130 GFAKASLEKYEEAIKDFNEVIKLNTKNEEAYFFRGLAKVKLEKDKEAIEDFNKSIKLNSK 189
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+ RG A+ L EAI+D ++ ++ PN+ RGI +++ A++D +
Sbjct: 190 NEEAYFNRGIAKTKLEIYEEAIKDFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAIKDFN 249
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQF 560
+KL+ N+ AY G+A G++++ E KAI+L+ N A+ L ++
Sbjct: 250 EVIKLNPNNEKAYLARGIAKIESGKHEEVIEDFNKAIELNPNNENAYFNRGIAKAKLEKY 309
Query: 561 YQ---------------------------DLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ L E+A+E + + ++K ++KAY RG+
Sbjct: 310 EEAVVDFNKAIKLNKNNEKTYFSRGITKVKLEKYEEAIEDFNKAIGLNKSYNKAYFNRGI 369
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L G++K+AI D + +G++ + + + R G+Y+EA+
Sbjct: 370 LKINFGKYKEAINDFNKAIGLNKNYNKAYFNRGILKTNFGKYKEAI 415
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 130/262 (49%), Gaps = 6/262 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG Y AI F++ +K +P +A RG + + E AI DF +
Sbjct: 56 DLYFNRGKLYSIINMYDEAIEDFNKAIKLNPNNEKAYFNRGITKVKLEKYEEAIEDFNKI 115
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP + G A+A+L + EAI+D ++ ++ + + RG+ K +
Sbjct: 116 IKLNPKNERGYFNIGFAKASLEKYEEAIKDFNEVIKLNTKNEEAYFFRGLAKVKLEKDKE 175
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLT 558
A+ED + +KL+ +N+ AY G+A + + Y++A + + I+L+ N +A+ G
Sbjct: 176 AIEDFNKSIKLNSKNEEAYFNRGIAKTKLEIYEEAIKDFNEVIKLNPNNEKAYLARGIAK 235
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ L E+A++ +V+ ++ KAY RG+ G+H++ I+D + + ++P+N
Sbjct: 236 SY---LEEYEEAIKDFNEVIKLNPNNEKAYLARGIAKIESGKHEEVIEDFNKAIELNPNN 292
Query: 619 IECLYLRASCYHAIGEYREAVI 640
+ R + +Y EAV+
Sbjct: 293 ENAYFNRGIAKAKLEKYEEAVV 314
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 29 VDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI-CNRAFCYSQLELHKH 87
+D M A+ +IE KL S + AI++++ + + +D+ NR YS + ++
Sbjct: 16 LDYFMTDALKYKIE--KLISSKKIEDAIKLVNRAIEEYNNDEDLYFNRGKLYSIINMYDE 73
Query: 88 VIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
I D +KA++L+P +AY +G L + EEA+ + K
Sbjct: 74 AIEDFNKAIKLNPNNEKAYFNRGITKVKLEKYEEAIEDFNK 114
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 66/117 (56%), Gaps = 13/117 (11%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDSLLAQS 66
L K + I + +E++++++ A R LAK+ ++ +++K+I+ L+S ++
Sbjct: 136 LEKYEEAIKDFNEVIKLNTKNEEAYFFR-GLAKVKLEKDKEAIEDFNKSIK-LNSKNEEA 193
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
Y NR ++LE+++ I+D ++ ++L+P +AY+ +G A S L EEA+
Sbjct: 194 Y-----FNRGIAKTKLEIYEEAIKDFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAI 245
>gi|440294379|gb|ELP87396.1| tetratricopeptide repeat protein, tpr, putative [Entamoeba invadens
IP1]
Length = 915
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 141/263 (53%), Gaps = 2/263 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+ + +D ++++G VN GK AI FDQ+LK P +GRG+ARA +L+ A+
Sbjct: 242 TNDLELDKQIAKGYLYVNTGKMQDAIKHFDQLLKAHPELIAGYLGRGSARAMSGDLKRAL 301
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+DF +A++ N +A+KRRGQ +AALG A+ D ++A++ P AD +RG +
Sbjct: 302 TDFDKAVKINAKCADAYKRRGQVKAALGNVNGALDDFTQAIKLSPEEADSYRQRGSLFHS 361
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
F+ A +DL +K + L L + +G +A A+ +AI N+ + +
Sbjct: 362 LGVFDKASDDLKKSLKYAPGDAQVINELALCFNGMGLVDEAINAYTRAINAKENYADPYI 421
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
HL Q Y+D+ ++ + L++ + + +Y++ G +L G+H++A+ L + +
Sbjct: 422 HLGQLYRDMGCYIRSKQMLEKAMKLAPTNHLSYYVLGNVLVSSGRHREALPFLQKSIELC 481
Query: 616 PSN--IECLYLRASCYHAIGEYR 636
P + E + + A+ Y A+G+ R
Sbjct: 482 PKDNCGEIVRMCAAAYLALGQNR 504
>gi|410925671|ref|XP_003976303.1| PREDICTED: tetratricopeptide repeat protein 13-like [Takifugu
rubripes]
Length = 824
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 140/260 (53%), Gaps = 6/260 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFT 439
L+ G + G Y A+ F +L+ DP A+ GRG A ++ Q + + A+ +
Sbjct: 111 LAIGYVLIGNGLYDEAVKHFSLLLQGDPELVSAIYGRGIAYGKKSLQDIKNADLALYELN 170
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I P+ E +++R + + LG EA+ DLS+A++ +P SA + RG + F +D+
Sbjct: 171 RVITLEPNWPEVYEQRAEILSPLGRISEALADLSRAVQLQP-SARLYRHRGTLLFISEDY 229
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AA+ED ++L K A Y GL G K+A E +A++L +F++A+ L Q
Sbjct: 230 VAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFREALKLKSDFIDAYKSLGQ 289
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
Y++L + E A+E Q+ L +D+ ++ LRG++L+ G ++AI + L ++P N
Sbjct: 290 AYRELGDFESAMESFQKALLLDQNHIQSLQLRGMMLYHHGSLQEAIGNFKRCLQLEPYNE 349
Query: 620 ECLYLRASCYHAIGEYREAV 639
C Y++ + A+G++ E +
Sbjct: 350 VCQYMKGLSHVAMGQFYEGI 369
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Y +A+ F Q L+ P A++ +G + L+ AI F EA++
Sbjct: 219 RGTLLFISEDYVAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFREALKLKS 278
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG+ A++ KAL + N L RG++ + A+ +
Sbjct: 279 DFIDAYKSLGQAYRELGDFESAMESFQKALLLDQNHIQSLQLRGMMLYHHGSLQEAIGNF 338
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 339 KRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 376
>gi|282900764|ref|ZP_06308705.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
CS-505]
gi|281194348|gb|EFA69304.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
CS-505]
Length = 1024
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 140/269 (52%), Gaps = 3/269 (1%)
Query: 375 KSKSI---SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
KS S+ + +F +R G AI + Q ++ +P Y A IGRG AR+ +
Sbjct: 217 KSSSVYSNNAEFYFNRAYKLYESGDKQGAIVDYTQAIQINPNYALAYIGRGNARSDLGDK 276
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI D+ +AIQ NP+ A+ RG AR+ LG+ AI D ++A++ PN AD + RGI
Sbjct: 277 QGAIVDYNQAIQINPNYALAYYNRGNARSELGDKQGAIVDYNQAIQINPNYADAYYNRGI 336
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ D A+ D + ++++ + AY G+A S +G+ + A + +AIQ++ N
Sbjct: 337 ARSELGDKQGAIVDYNQAIQINPNDADAYNNRGIARSELGDKQGAIVDYNQAIQINPNNA 396
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+A+ + +L + + A+ Q + I+ ++ AY+ RGL LG + AI D +
Sbjct: 397 DAYNNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQA 456
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ I+P+N Y R +G+ + A++
Sbjct: 457 IQINPNNAYAYYNRGLARSELGDKQGAIV 485
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 131/232 (56%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G AI ++Q ++ +P Y +A IGRG AR+ + + AI D+ +AIQ N
Sbjct: 469 NRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQIN 528
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG AR+ LG+ AI D ++A++ PN AD + RG+ + D A+ D
Sbjct: 529 PNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVD 588
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ N AY G+A S +G+ + A + +AIQ++ N+ +++ + +L
Sbjct: 589 YNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELG 648
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ + A+ Q + I+ ++ +Y+ RG+ LG + AI D + + I+P+
Sbjct: 649 DKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPN 700
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 147/278 (52%), Gaps = 3/278 (1%)
Query: 366 KKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
K+ + +++ I+ ++ L+ RG A+ + G AI ++Q ++ +P Y A RG
Sbjct: 242 KQGAIVDYTQAIQINPNYALAYIGRGNARSDLGDKQGAIVDYNQAIQINPNYALAYYNRG 301
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
AR+ + + AI D+ +AIQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN
Sbjct: 302 NARSELGDKQGAIVDYNQAIQINPNYADAYYNRGIARSELGDKQGAIVDYNQAIQINPND 361
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
AD + RGI + D A+ D + ++++ N AY G+A S +G+ + A + +
Sbjct: 362 ADAYNNRGIARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQ 421
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AIQ++ N+ A+ + +L + + A+ Q + I+ + AY+ RGL LG +
Sbjct: 422 AIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYYNRGLARSELGDKQ 481
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
AI D + + I+P+ + R + +G+ + A++
Sbjct: 482 GAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIV 519
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 133/248 (53%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ G AI + Q ++ +P Y ++ RG AR+ + + AI D+ +AIQ NP
Sbjct: 742 RGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINP 801
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG AR+ LG+ AI D ++A++ PN+AD + RGI + D A+ D
Sbjct: 802 NDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADSYYNRGIARSELGDKQGAIVDY 861
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++++ +Y G+A S +G+ + A + +AIQ++ N+ +A+ +L +
Sbjct: 862 NQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGD 921
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ A+ Q + I+ ++ AY+ RG+ LG + AI D + + I+P++ + Y R
Sbjct: 922 KQGAIVDYNQAIQINPNYADAYNNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRG 981
Query: 627 SCYHAIGE 634
+G+
Sbjct: 982 LARSELGD 989
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 128/233 (54%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + RG A+ G AI ++Q ++ +P Y +A IGRG AR+ + + AI D+ +A
Sbjct: 499 DAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQA 558
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN+AD + RGI + D
Sbjct: 559 IQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQG 618
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++++ +Y G+A S +G+ + A + +AIQ++ N+ +++ +
Sbjct: 619 AIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIAR 678
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+L + + A+ Q + I+ ++ AY+ RGL LG + AI D + + I
Sbjct: 679 SELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQI 731
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 136/259 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RGIA+ G AI ++Q ++ +P +A RG AR+ + + AI D+ +A
Sbjct: 329 DAYYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYNNRGIARSELGDKQGAIVDYNQA 388
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN A + RG+ + D
Sbjct: 389 IQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQG 448
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++++ N AY GLA S +G+ + A + +AIQ++ N+ +A+
Sbjct: 449 AIVDYNQAIQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNAR 508
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+L + + A+ Q + I+ ++ AY RG LG + AI D + + I+P++ +
Sbjct: 509 SELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADA 568
Query: 622 LYLRASCYHAIGEYREAVI 640
Y R +G+ + A++
Sbjct: 569 YYNRGLARSELGDKQGAIV 587
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 145/278 (52%), Gaps = 3/278 (1%)
Query: 366 KKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
K+ + +++ I+ ++ L+ RG A+ G AI ++Q ++ +P Y +A RG
Sbjct: 276 KQGAIVDYNQAIQINPNYALAYYNRGNARSELGDKQGAIVDYNQAIQINPNYADAYYNRG 335
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
AR+ + + AI D+ +AIQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN+
Sbjct: 336 IARSELGDKQGAIVDYNQAIQINPNDADAYNNRGIARSELGDKQGAIVDYNQAIQINPNN 395
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
AD + RGI + D A+ D + ++++ AY GLA S +G+ + A + +
Sbjct: 396 ADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQ 455
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AIQ++ N A+ + +L + + A+ Q + I+ ++ AY RG LG +
Sbjct: 456 AIQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQ 515
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
AI D + + I+P+ + R + +G+ + A++
Sbjct: 516 GAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIV 553
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 139/255 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ G AI ++Q ++ +P Y ++ RG AR+ + + AI D+T+AIQ N
Sbjct: 605 NRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYTQAIQIN 664
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +++ RG AR+ LG+ AI D ++A++ PN A + RG+ + D A+ D
Sbjct: 665 PNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVD 724
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ N AY G+A S +G+ + A + +AIQ++ N+ +++ + +L
Sbjct: 725 YNQAIQINPNNAYAYNNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELG 784
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+ Q + I+ + AY+ RGL LG + AI D + + I+P+N + Y R
Sbjct: 785 DKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADSYYNR 844
Query: 626 ASCYHAIGEYREAVI 640
+G+ + A++
Sbjct: 845 GIARSELGDKQGAIV 859
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 134/255 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G AI ++Q ++ +P A RG AR+ + + AI D+ +AIQ N
Sbjct: 435 NRGLARSELGDKQGAIVDYNQAIQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQIN 494
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG AR+ LG+ AI D ++A++ PN AD RG + D A+ D
Sbjct: 495 PNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVD 554
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ + AY GLA S +G+ + A + +AIQ++ N +A+ + +L
Sbjct: 555 YNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELG 614
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+ Q + I+ ++ +Y+ RG+ LG + AI D + + I+P+ + Y R
Sbjct: 615 DKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNR 674
Query: 626 ASCYHAIGEYREAVI 640
+G+ + A++
Sbjct: 675 GIARSELGDKQGAIV 689
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 133/255 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ G AI ++Q ++ +P +A RG AR+ + + AI D+ +AIQ N
Sbjct: 367 NRGIARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQIN 426
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR+ LG+ AI D ++A++ PN+A + RG+ + D A+ D
Sbjct: 427 PNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYYNRGLARSELGDKQGAIVD 486
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY G A S +G+ + A + +AIQ++ N+ +A+ +L
Sbjct: 487 YNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELG 546
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+ Q + I+ + AY+ RGL LG + AI D + + I+P+N + R
Sbjct: 547 DKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNR 606
Query: 626 ASCYHAIGEYREAVI 640
+G+ + A++
Sbjct: 607 GIARSELGDKQGAIV 621
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 137/259 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A+ G AI ++Q ++ +P +A RG AR+ + + AI D+ +A
Sbjct: 567 DAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQA 626
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +++ RG AR+ LG+ AI D ++A++ PN AD + RGI + D
Sbjct: 627 IQINPNYADSYYNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQG 686
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++++ AY GLA S +G+ + A + +AIQ++ N A+ +
Sbjct: 687 AIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYNNRGIAR 746
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+L + + A+ Q + I+ ++ +Y+ RG+ LG + AI D + + I+P++ +
Sbjct: 747 SELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNDADA 806
Query: 622 LYLRASCYHAIGEYREAVI 640
Y R +G+ + A++
Sbjct: 807 YYNRGLARSELGDKQGAIV 825
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 135/259 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + RG A+ G AI ++Q ++ +P +A RG AR+ + + AI D+ +A
Sbjct: 533 DAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQA 592
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN AD + RGI + D
Sbjct: 593 IQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQG 652
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++++ +Y G+A S +G+ + A + +AIQ++ N+ A+ +
Sbjct: 653 AIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLAR 712
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+L + + A+ Q + I+ + AY+ RG+ LG + AI D + + I+P+ +
Sbjct: 713 SELGDKQGAIVDYNQAIQINPNNAYAYNNRGIARSELGDKQGAIVDYTQAIQINPNYADS 772
Query: 622 LYLRASCYHAIGEYREAVI 640
Y R +G+ + A++
Sbjct: 773 YYNRGIARSELGDKQGAIV 791
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 131/255 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ G AI ++Q ++ +P Y A RG AR+ + + AI D+ +AIQ N
Sbjct: 401 NRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQIN 460
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR+ LG+ AI D ++A++ PN AD RG + D A+ D
Sbjct: 461 PNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVD 520
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY G A S +G+ + A + +AIQ++ N +A+ + +L
Sbjct: 521 YNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELG 580
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+ Q + I+ + AY+ RG+ LG + AI D + + I+P+ + Y R
Sbjct: 581 DKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNR 640
Query: 626 ASCYHAIGEYREAVI 640
+G+ + A++
Sbjct: 641 GIARSELGDKQGAIV 655
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 137/259 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RGIA+ G AI ++Q ++ +P Y A RG AR+ + + AI D+ +A
Sbjct: 669 DSYYNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQA 728
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ A+ RG AR+ LG+ AI D ++A++ PN AD + RGI + D
Sbjct: 729 IQINPNNAYAYNNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQG 788
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++++ + AY GLA S +G+ + A + +AIQ++ N +++ +
Sbjct: 789 AIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADSYYNRGIAR 848
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+L + + A+ Q + I+ ++ +Y+ RG+ LG + AI D + + I+P+ +
Sbjct: 849 SELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADA 908
Query: 622 LYLRASCYHAIGEYREAVI 640
R + +G+ + A++
Sbjct: 909 YIGRGNARSELGDKQGAIV 927
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 135/255 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G AI ++Q ++ +P A RG AR+ + + AI D+T+AIQ N
Sbjct: 707 NRGLARSELGDKQGAIVDYNQAIQINPNNAYAYNNRGIARSELGDKQGAIVDYTQAIQIN 766
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +++ RG AR+ LG+ AI D ++A++ PN AD + RG+ + D A+ D
Sbjct: 767 PNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVD 826
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ N +Y G+A S +G+ + A + +AIQ++ N+ +++ + +L
Sbjct: 827 YNQAIQINPNNADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELG 886
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+ Q + I+ ++ AY RG LG + AI D + + I+P+ + R
Sbjct: 887 DKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYNNR 946
Query: 626 ASCYHAIGEYREAVI 640
+G+ + A++
Sbjct: 947 GIARSELGDKQGAIV 961
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 120/229 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RGIA+ G AI ++Q ++ +P +A RG AR+ + + AI D+ +A
Sbjct: 771 DSYYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQA 830
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +++ RG AR+ LG+ AI D ++A++ PN AD + RGI + D
Sbjct: 831 IQINPNNADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQG 890
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++++ AY G A S +G+ + A + +AIQ++ N+ +A+ +
Sbjct: 891 AIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYNNRGIAR 950
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+L + + A+ Q + I+ + AY+ RGL LG + A D +
Sbjct: 951 SELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGARGDFQT 999
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 135/259 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RGIA+ G AI + Q ++ +P Y ++ RG AR+ + + AI D+ +A
Sbjct: 635 DSYYNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQA 694
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ A+ RG AR+ LG+ AI D ++A++ PN+A + RGI + D
Sbjct: 695 IQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYNNRGIARSELGDKQG 754
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++++ +Y G+A S +G+ + A + +AIQ++ N +A+ +
Sbjct: 755 AIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLAR 814
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+L + + A+ Q + I+ + +Y+ RG+ LG + AI D + + I+P+ +
Sbjct: 815 SELGDKQGAIVDYNQAIQINPNNADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADS 874
Query: 622 LYLRASCYHAIGEYREAVI 640
Y R +G+ + A++
Sbjct: 875 YYNRGIARSELGDKQGAIV 893
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 88/157 (56%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ D +RGIA+ G AI ++Q ++ +P Y ++ RG AR+ + + AI D+
Sbjct: 837 NADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYN 896
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AIQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN AD + RGI + D
Sbjct: 897 QAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYNNRGIARSELGDK 956
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + ++++ + AY GLA S +G+ + A
Sbjct: 957 QGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGA 993
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 73/131 (55%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RGIA+ G AI ++Q ++ +P Y +A IGRG AR+ + + AI D+ +A
Sbjct: 873 DSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQA 932
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +A+ RG AR+ LG+ AI D ++A++ PN AD + RG+ + D
Sbjct: 933 IQINPNYADAYNNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQG 992
Query: 502 AVEDLSACVKL 512
A D +L
Sbjct: 993 ARGDFQTAARL 1003
>gi|282901533|ref|ZP_06309455.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281193576|gb|EFA68551.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 1280
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RGIA+ N G AI + Q + +P Y +A RG AR + + ++ D+T+AI N
Sbjct: 517 GRGIARFNLGDKQGAIDDYTQAINTNPNYAQAYYNRGIARFNLEDKQGSVDDYTQAININ 576
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ G R+ LG+ EA+ + ++AL P+ + RG+ + D A++D
Sbjct: 577 PNYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVARGLTRSELGDNQGAIDD 636
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + Y G+ S I +Y++A + + +AI + ++ +A+ + Y DL
Sbjct: 637 YTQALNLNPDYACIYNNRGIVRSDIADYQRAIDDYTEAINISPDYADAYYNRAIVYYDLG 696
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N ++A++ Q L I + AY RG L+ LG + AI D L IDPS + R
Sbjct: 697 NYQRAIDDYTQSLEIKSNCADAYIGRGTALYKLGDSQGAINDFHHALDIDPSYADAYNNR 756
Query: 626 ASCYHAIGEYREAV 639
+ +G+++ A+
Sbjct: 757 GIVRYELGDHQGAI 770
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 129/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G Y AI + Q L+ D Y EA GT R + E AI D+T+AI N
Sbjct: 449 NRGAIRTYLGNYQGAIDDYIQALRVDSNYVEAYYNWGTTRINLEDNEGAIDDYTQAININ 508
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG AR LG+ AI D ++A+ PN A + RGI F +D +V+D
Sbjct: 509 PNYAQAYYGRGIARFNLGDKQGAIDDYTQAINTNPNYAQAYYNRGIARFNLEDKQGSVDD 568
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ AY G+ S +G+ +A + +A+ ++ + E + +L
Sbjct: 569 YTQAININPNYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVARGLTRSELG 628
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+++ A++ Q L ++ ++ Y+ RG++ + +++AI D + + I P + Y R
Sbjct: 629 DNQGAIDDYTQALNLNPDYACIYNNRGIVRSDIADYQRAIDDYTEAINISPDYADAYYNR 688
Query: 626 ASCYHAIGEYREAV 639
A Y+ +G Y+ A+
Sbjct: 689 AIVYYDLGNYQRAI 702
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 136/269 (50%), Gaps = 3/269 (1%)
Query: 374 SKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++ +IS D+ +R I + G Y AI + Q L+ +A IGRGTA +
Sbjct: 672 TEAINISPDYADAYYNRAIVYYDLGNYQRAIDDYTQSLEIKSNCADAYIGRGTALYKLGD 731
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+DF A+ +PS +A+ RG R LG+ AI D AL+ +P+ AD + RG
Sbjct: 732 SQGAINDFHHALDIDPSYADAYNNRGIVRYELGDHQGAIGDFHHALDIDPSYADAYNNRG 791
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
IV ++ +D A+ED + + ++ AY G+ +GE + A E +A + N+
Sbjct: 792 IVRYELRDNRGAIEDFNHALNINSNYAQAYNNRGIVRICLGERQLAIEDFTQATIIASNY 851
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
E++ + +L N +KA+E Q L I+ +++AY+ RG+ LG + A D S
Sbjct: 852 TESYINRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDSEWAKDDFSQ 911
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I+P E R + +G+ + A+
Sbjct: 912 ALQINPYYAEAYNNRGIVCYKLGDRQGAI 940
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 129/240 (53%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ + G AI F+Q+++ + + + RG + AI+DF++AI+ NP
Sbjct: 314 RGLARYDLGDKQGAIDDFNQVIRINSHFADGYAARGLVYCDLGNHQEAINDFSQAIRINP 373
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG AR+ LG+ AI D +++L P A + RGI+ AA++D
Sbjct: 374 NYAQAYHNRGVARSQLGDKQGAIDDYTQSLNLNPKFASAYYNRGIIRSDLGSNKAAMDDC 433
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++++ AY G + +G Y+ A + +++A+++D N++EA+ + +L +
Sbjct: 434 TQAIRINPNYAEAYNNRGAIRTYLGNYQGAIDDYIQALRVDSNYVEAYYNWGTTRINLED 493
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+E A++ Q + I+ +++AY+ RG+ LG + AI D + + +P+ + Y R
Sbjct: 494 NEGAIDDYTQAININPNYAQAYYGRGIARFNLGDKQGAIDDYTQAINTNPNYAQAYYNRG 553
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
KS D + RG A G AI+ F L DP Y +A RG R + + AI
Sbjct: 712 KSNCADAYIGRGTALYKLGDSQGAINDFHHALDIDPSYADAYNNRGIVRYELGDHQGAIG 771
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
DF A+ +PS +A+ RG R L ++ AI+D + AL N A + RGIV
Sbjct: 772 DFHHALDIDPSYADAYNNRGIVRYELRDNRGAIEDFNHALNINSNYAQAYNNRGIVRICL 831
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ A+ED + + +Y G A +G +KA E +A+ ++ N+ +A+ +
Sbjct: 832 GERQLAIEDFTQATIIASNYTESYINRGYARYELGNRQKAIEDFNQALNINPNYAQAYNN 891
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
Y DL +SE A + Q L I+ +++AY+ RG++ + LG + AI+D + L I+
Sbjct: 892 RGVAYTDLGDSEWAKDDFSQALQINPYYAEAYNNRGIVCYKLGDRQGAIEDFNQALKINS 951
Query: 617 SNIECLYLRASCYHAIGEYREAV 639
+ +E +R + + +G+ + A+
Sbjct: 952 NYVEAYNIRGNIRYELGDRQGAI 974
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 123/233 (52%), Gaps = 2/233 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ N ++ + Q + +P Y +A G R+ + A++++T+A+ N
Sbjct: 551 NRGIARFNLEDKQGSVDDYTQAININPNYAQAYYAWGMLRSELGDKPEAVNNYTQALNIN 610
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E + RG R+ LG++ AI D ++AL P+ A I + RGIV D+ A++D
Sbjct: 611 PDDTETYVARGLTRSELGDNQGAIDDYTQALNLNPDYACIYNNRGIVRSDIADYQRAIDD 670
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQDL 564
+ + + + AY + +G Y++A + + +++++ N +A+ G T Y+ L
Sbjct: 671 YTEAINISPDYADAYYNRAIVYYDLGNYQRAIDDYTQSLEIKSNCADAYIGRGTALYK-L 729
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+S+ A+ L ID ++ AY+ RG++ + LG H+ AI D L IDPS
Sbjct: 730 GDSQGAINDFHHALDIDPSYADAYNNRGIVRYELGDHQGAIGDFHHALDIDPS 782
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 122/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ + G AI F+Q L + + +A RG AR + + AI DF + I+ N
Sbjct: 279 SRGVTHSDMGYLEKAIDDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAIDDFNQVIRIN 338
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + RG LG EAI D S+A+ PN A H RG+ + D A++D
Sbjct: 339 SHFADGYAARGLVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRGVARSQLGDKQGAIDD 398
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + SAY G+ S +G K A + +AI+++ N+ EA+ + L
Sbjct: 399 YTQSLNLNPKFASAYYNRGIIRSDLGSNKAAMDDCTQAIRINPNYAEAYNNRGAIRTYLG 458
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N + A++ Q L +D + +AY+ G L ++ AI D + + I+P+ + Y R
Sbjct: 459 NYQGAIDDYIQALRVDSNYVEAYYNWGTTRINLEDNEGAIDDYTQAININPNYAQAYYGR 518
Query: 626 ASCYHAIGEYREAV 639
+G+ + A+
Sbjct: 519 GIARFNLGDKQGAI 532
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 128/253 (50%), Gaps = 5/253 (1%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
++SIS++ L+ RGIA+ N G AI F+Q L +P A RG +
Sbjct: 230 TQSISINSNLAQAYMERGIARSNLGDGQEAIEDFNQALDINPNLALAAYSRGVTHSDMGY 289
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
LE AI DF + + N + +A+ RRG AR LG+ AI D ++ + + AD RG
Sbjct: 290 LEKAIDDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAIDDFNQVIRINSHFADGYAARG 349
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+V + A+ D S ++++ AY G+A S +G+ + A + + +++ L+ F
Sbjct: 350 LVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTQSLNLNPKF 409
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + DL +++ A++ Q + I+ +++AY+ RG + LG ++ AI D
Sbjct: 410 ASAYYNRGIIRSDLGSNKAAMDDCTQAIRINPNYAEAYNNRGAIRTYLGNYQGAIDDYIQ 469
Query: 611 GLGIDPSNIECLY 623
L +D + +E Y
Sbjct: 470 ALRVDSNYVEAYY 482
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 114/219 (52%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG AR+ + AI+DFT++I N + +A+ RG AR+ LG+ EAI+D ++AL+ P
Sbjct: 212 RGIARSDLGDHRGAINDFTQSISINSNLAQAYMERGIARSNLGDGQEAIEDFNQALDINP 271
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A + RG+ + A++D + + L+ AYT GLA +G+ + A +
Sbjct: 272 NLALAAYSRGVTHSDMGYLEKAIDDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAIDDF 331
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+ I+++ +F + + Y DL N ++A+ Q + I+ +++AYH RG+ LG
Sbjct: 332 NQVIRINSHFADGYAARGLVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRGVARSQLGD 391
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI D + L ++P Y R +G + A+
Sbjct: 392 KQGAIDDYTQSLNLNPKFASAYYNRGIIRSDLGSNKAAM 430
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 114/229 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + G + AI F L DP Y +A RG R R+ AI DF A+ N
Sbjct: 755 NRGIVRYELGDHQGAIGDFHHALDIDPSYADAYNNRGIVRYELRDNRGAIEDFNHALNIN 814
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG R LGE AI+D ++A N + RG ++ + A+ED
Sbjct: 815 SNYAQAYNNRGIVRICLGERQLAIEDFTQATIIASNYTESYINRGYARYELGNRQKAIED 874
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ AY G+A + +G+ + A++ +A+Q++ + EA+ + L
Sbjct: 875 FNQALNINPNYAQAYNNRGVAYTDLGDSEWAKDDFSQALQINPYYAEAYNNRGIVCYKLG 934
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + A+E Q L I+ + +AY++RG + + LG + AI+D + L +
Sbjct: 935 DRQGAIEDFNQALKINSNYVEAYNIRGNIRYELGDRQGAIEDFNRALSL 983
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 128/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G + AI+ F Q ++ +P Y +A RG AR+ + + AI D+T+++ N
Sbjct: 347 ARGLVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTQSLNLN 406
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG R+ LG + A+ D ++A+ PN A+ + RG + ++ A++D
Sbjct: 407 PKFASAYYNRGIIRSDLGSNKAAMDDCTQAIRINPNYAEAYNNRGAIRTYLGNYQGAIDD 466
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++D AY G ++ + + A + + +AI ++ N+ +A+ +L
Sbjct: 467 YIQALRVDSNYVEAYYNWGTTRINLEDNEGAIDDYTQAININPNYAQAYYGRGIARFNLG 526
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A++ Q + + +++AY+ RG+ L + ++ D + + I+P+ + Y
Sbjct: 527 DKQGAIDDYTQAINTNPNYAQAYYNRGIARFNLEDKQGSVDDYTQAININPNYAQAYYAW 586
Query: 626 ASCYHAIGEYREAV 639
+G+ EAV
Sbjct: 587 GMLRSELGDKPEAV 600
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 127/255 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RGIA+ + G + AI+ F Q + + +A + RG AR+ + + AI DF +A+
Sbjct: 210 LCRGIARSDLGDHRGAINDFTQSISINSNLAQAYMERGIARSNLGDGQEAIEDFNQALDI 269
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A RG + +G +AI D ++ L D RG+ + D A++
Sbjct: 270 NPNLALAAYSRGVTHSDMGYLEKAIDDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAID 329
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++++ Y GL +G +++A +AI+++ N+ +A+ + L
Sbjct: 330 DFNQVIRINSHFADGYAARGLVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRGVARSQL 389
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ + A++ Q L ++ +F+ AY+ RG++ LG +K A+ D + + I+P+ E
Sbjct: 390 GDKQGAIDDYTQSLNLNPKFASAYYNRGIIRSDLGSNKAAMDDCTQAIRINPNYAEAYNN 449
Query: 625 RASCYHAIGEYREAV 639
R + +G Y+ A+
Sbjct: 450 RGAIRTYLGNYQGAI 464
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 141/692 (20%), Positives = 275/692 (39%), Gaps = 95/692 (13%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLL 63
+R L I + + + ++S +A A R I + L ++ ++++A+ I +L
Sbjct: 215 ARSDLGDHRGAINDFTQSISINSNLAQAYMERGIARSNLGDGQEAIEDFNQALDINPNLA 274
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
+Y +R +S + + I D ++ L L+ AY +G A LG K+ A+
Sbjct: 275 LAAY------SRGVTHSDMGYLEKAIDDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAI 328
Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRS-VTCEYDVSNSMSSLTVSESGLNAN 182
D Q + + R V C D+ N ++ + N
Sbjct: 329 D--------------DFNQVIRINSHFADGYAARGLVYC--DLGNHQEAINDFSQAIRIN 372
Query: 183 DKMSETSENH--------NKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSV 234
++ N +K D +QS +++ + + ++ + RSD +++
Sbjct: 373 PNYAQAYHNRGVARSQLGDKQGAIDDYTQSLNLNPKFASAYYNRGII--RSDLGSNKAAM 430
Query: 235 PVSKSGLHIN----------GKLREVSENHNGSSD--------------GSKSTHASRDA 270
+ IN G +R N+ G+ D + +R
Sbjct: 431 DDCTQAIRINPNYAEAYNNRGAIRTYLGNYQGAIDDYIQALRVDSNYVEAYYNWGTTRIN 490
Query: 271 SEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDS----NTN-- 324
E N + DD+ ++N + + G L +++D NTN
Sbjct: 491 LEDNEGAIDDY------TQAININPNYAQAYYGRGIARFNLGDKQGAIDDYTQAINTNPN 544
Query: 325 -SESYSKSSIS-----DNKSS--DSTES------RSKLSFKWDMLKETSNEAKRNKKFCV 370
+++Y I+ D + S D T++ ++ + W ML+ + K V
Sbjct: 545 YAQAYYNRGIARFNLEDKQGSVDDYTQAININPNYAQAYYAWGMLRSELGD----KPEAV 600
Query: 371 TRISKSKSISVD---FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
+++ +I+ D ++RG+ + G AI + Q L +P Y RG R+
Sbjct: 601 NNYTQALNINPDDTETYVARGLTRSELGDNQGAIDDYTQALNLNPDYACIYNNRGIVRSD 660
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + AI D+TEAI +P +A+ R LG AI D +++LE + N AD
Sbjct: 661 IADYQRAIDDYTEAINISPDYADAYYNRAIVYYDLGNYQRAIDDYTQSLEIKSNCADAYI 720
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG +K D A+ D + +D AY G+ +G+++ A A+ +D
Sbjct: 721 GRGTALYKLGDSQGAINDFHHALDIDPSYADAYNNRGIVRYELGDHQGAIGDFHHALDID 780
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++ +A+ + +L ++ A+E L I+ +++AY+ RG++ LG+ + AI+D
Sbjct: 781 PSYADAYNNRGIVRYELRDNRGAIEDFNHALNINSNYAQAYNNRGIVRICLGERQLAIED 840
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ I + E R + +G ++A+
Sbjct: 841 FTQATIIASNYTESYINRGYARYELGNRQKAI 872
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 66/128 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A+ G AI F+Q L +P Y +A RG A + E A DF++A+Q
Sbjct: 856 INRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDSEWAKDDFSQALQI 915
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP EA+ RG LG+ AI+D ++AL+ N + + RG + ++ D A+E
Sbjct: 916 NPYYAEAYNNRGIVCYKLGDRQGAIEDFNQALKINSNYVEAYNIRGNIRYELGDRQGAIE 975
Query: 505 DLSACVKL 512
D + + L
Sbjct: 976 DFNRALSL 983
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 27/158 (17%)
Query: 10 RYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDSLL 63
RY L I + + + ++S A A R + ++C ++ ++++A I+ S
Sbjct: 794 RYELRDNRGAIEDFNHALNINSNYAQAYNNR-GIVRICLGERQLAIEDFTQAT-IIASNY 851
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
+SY NR + +L + I D ++AL ++P QAY +G A++ LG E
Sbjct: 852 TESY-----INRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDSE--- 903
Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTC 161
W K D Q L++ A +R + C
Sbjct: 904 --WAKD---------DFSQALQINPYYAEAYNNRGIVC 930
>gi|440291767|gb|ELP85009.1| tetratricopeptide repeat protein, putative [Entamoeba invadens IP1]
Length = 926
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 144/278 (51%), Gaps = 12/278 (4%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
+++ + +D L+ G VN K A+ F L + P L+GRG+A A +
Sbjct: 210 NRTNDVVIDKELAMGYLYVNNNKLTEAVEYFTTFLSKYPNVVGGLLGRGSAYAMLARFQE 269
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIV 492
AI DFT+AI+ +P+ G+++KRRGQ AA G A+ D +KA+E + AD +RG +
Sbjct: 270 AIVDFTQAIKIDPTCGDSYKRRGQTLAATGNLERALHDFNKAIELCKETDADCYSQRGSL 329
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++K++ A +D +KL+ + SA+ +LGL +++G +A +A+++A+Q++ ++E
Sbjct: 330 FQQYKNYELAKDDFKKSLKLNASDASAWNHLGLNNNALGLIDEAADAYVRALQINDKYVE 389
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ +L Q +D +K+ + ++ + S A+++ G+L G H A+ + + L
Sbjct: 390 CYVNLAQLQKDAGQFQKSKDIFMKLFRMCPTHSYAHYVCGVLYQQNGMHTAAVNEFKAAL 449
Query: 613 G--IDPSN---------IECLYLRASCYHAIGEYREAV 639
DP +EC A G YR AV
Sbjct: 450 DNRTDPQYGLEKDKEKLLECWRYSGVTKTACGFYRSAV 487
>gi|390334343|ref|XP_787775.3| PREDICTED: tetratricopeptide repeat protein 13-like
[Strongylocentrotus purpuratus]
Length = 926
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQRELEAA--IS 436
D++L I +N G+ A+ + ++K+DP + A R A R Q L AA I
Sbjct: 207 DYKLGFSIVLLNTGREEMALDMISALIKQDPKFIGAYHARAVAYSRRGMQHPLNAALAIQ 266
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
DFT AI+ +P W++R + + G + EA D+SKA++ P +A + RG + FK
Sbjct: 267 DFTRAIELDPRNPIGWEKRAEVFSTQGRNREAYGDISKAIDLRP-TAKLYKYRGYMMFKE 325
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ + AA +DL VK DK L ++L G+ ++ KA+++ ++++
Sbjct: 326 EKYVAATKDLMESVKEDKTQVDVMHLLAISLYHQGKLHESIRIFKKALEIKPDYVDVLRS 385
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
L + Y++L + E +L+ + L+ ++ LRG L + G+ ++A+ D LG+DP
Sbjct: 386 LARAYRELGDYENSLDSFNKALHYSPHHVQSIQLRGSLHYHTGKPREALSDFQFCLGLDP 445
Query: 617 SNIECLYLRASCYHAIGEYREAV 639
+N C Y++ +C ++G+Y +AV
Sbjct: 446 TNEVCRYMKGACLVSMGQYYDAV 468
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL--- 431
K VD I+ ++GK +I IF + L+ P Y + L R ARA+ REL
Sbjct: 340 KEDKTQVDVMHLLAISLYHQGKLHESIRIFKKALEIKPDYVDVL--RSLARAY-RELGDY 396
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
E ++ F +A+ +P ++ + RG G+ EA+ D L +P +
Sbjct: 397 ENSLDSFNKALHYSPHHVQSIQLRGSLHYHTGKPREALSDFQFCLGLDPTN 447
>gi|422338995|ref|ZP_16419955.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|355372122|gb|EHG19465.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 652
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 125/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + GK+ AI +++ + +P RGT + E AI D+ + I N
Sbjct: 83 NRGNAYFSLGKFEDAIQDYNKAIDLNPNNASYYNNRGTTFTNLEKYEDAIQDYNKTIDLN 142
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A L E +AI D +KA++ PN RG ++ A+ D
Sbjct: 143 PNDNYAYFNRGAAFTYLNEYEKAINDFNKAIDLNPNDDSAYFNRGTAFTNLSNYEKAIND 202
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ N S Y Y G + G Y +A + KAI+L+ F+ + +L Y +L
Sbjct: 203 FNKAIDLNSNNASYYNYRGTLYINQGNYDEAVKDFSKAIELNPIFVFGYSNLGSLYNNLN 262
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ EKA+E L + + +D FS AY++RG+ + +A+KD S + ++P++ E Y
Sbjct: 263 DYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQEKFDEAVKDFSKAIELNPNDKEYYYNL 322
Query: 626 ASCYHAIGEYREAV 639
Y + Y +A+
Sbjct: 323 GILYIDLNNYEKAI 336
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 120/232 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N KY AI +++ + +P A RG A + E E AI+DF +AI N
Sbjct: 117 NRGTTFTNLEKYEDAIQDYNKTIDLNPNDNYAYFNRGAAFTYLNEYEKAINDFNKAIDLN 176
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A L +AI D +KA++ N+A + RG + +++ AV+D
Sbjct: 177 PNDDSAYFNRGTAFTNLSNYEKAINDFNKAIDLNSNNASYYNYRGTLYINQGNYDEAVKD 236
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++L+ Y+ LG +++ +Y+KA E KAI LD NF +A+ Y +
Sbjct: 237 FSKAIELNPIFVFGYSNLGSLYNNLNDYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQE 296
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++A++ + + ++ + Y+ G+L L ++KAI+ L+ + +DP+
Sbjct: 297 KFDEAVKDFSKAIELNPNDKEYYYNLGILYIDLNNYEKAIETLNKAIDLDPN 348
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A N Y AI+ F++ + + RGT Q + A+ DF++AI+
Sbjct: 184 FNRGTAFTNLSNYEKAINDFNKAIDLNSNNASYYNYRGTLYINQGNYDEAVKDFSKAIEL 243
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + G L + +AI++L+KA++ +PN +D + RGI + F+ AV+
Sbjct: 244 NPIFVFGYSNLGSLYNNLNDYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQEKFDEAVK 303
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
D S ++L+ +K Y LG+ + Y+KA E KAI LD NF +A
Sbjct: 304 DFSKAIELNPNDKEYYYNLGILYIDLNNYEKAIETLNKAIDLDPNFSDA 352
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 94/189 (49%), Gaps = 1/189 (0%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADI-LHERGIVNFKFKDFNAAVEDLSACV 510
+ RG LG+ +AIQ+ KA+E + N + + RG F F A++D + +
Sbjct: 12 YYNRGDTFFDLGKFEDAIQNYDKAIELDSNVNSVYYYNRGNAYFSLGKFEEAIQDYNKAI 71
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
L+ + +Y+ G A S+G+++ A + + KAI L+ N + + + +L E A
Sbjct: 72 DLNPNDDLSYSNRGNAYFSLGKFEDAIQDYNKAIDLNPNNASYYNNRGTTFTNLEKYEDA 131
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
++ + + ++ + AY RG L +++KAI D + + ++P++ + R + +
Sbjct: 132 IQDYNKTIDLNPNDNYAYFNRGAAFTYLNEYEKAINDFNKAIDLNPNDDSAYFNRGTAFT 191
Query: 631 AIGEYREAV 639
+ Y +A+
Sbjct: 192 NLSNYEKAI 200
>gi|344247251|gb|EGW03355.1| Tetratricopeptide repeat protein 13 [Cricetulus griseus]
Length = 677
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 135/253 (53%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
V G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 64 VGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVIALEP 123
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 124 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 182
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L++ +A Y GL G K+A EA +A++ +F++A+ L Q Y++L N
Sbjct: 183 EQSLELNRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGN 242
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 243 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 302
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 303 LSHVAMGQFYEGI 315
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F+Q L+ + P A++ +G
Sbjct: 145 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFEQSLELNRNQPTAMLYKGLTFF 204
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 205 HRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 264
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 265 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 322
>gi|432946560|ref|XP_004083826.1| PREDICTED: tetratricopeptide repeat protein 13-like [Oryzias
latipes]
Length = 826
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 137/253 (54%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+ DP A+ GRG A ++ Q + + A+ + I P
Sbjct: 120 IGNGLYDEAIKHFSLLLQNDPELVSAIYGRGIAYGKKSLQDIKNADLALYELNRVIALEP 179
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ AA+ED
Sbjct: 180 NWPEVYEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLLFISEDYVAAMEDF 238
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L K A Y GL G K+A E +A++L +F++A+ L Q Y++L +
Sbjct: 239 QRSLELKKNQPIAMLYKGLTYFHRGMLKEAIETFKEALKLKSDFIDAYKSLGQAYRELGD 298
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A+E Q+ L +++ ++ LRG++L+ G ++A+ + L ++P N C Y++
Sbjct: 299 FESAMESFQKALMMNQNHIQSLQLRGMMLYHHGSLQEALGNFKRCLQLEPYNEVCQYMKG 358
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 359 LSHVAMGQFYEGI 371
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Y +A+ F + L+ P A++ +G + L+ AI F EA++
Sbjct: 221 RGTLLFISEDYVAAMEDFQRSLELKKNQPIAMLYKGLTYFHRGMLKEAIETFKEALKLKS 280
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG+ A++ KAL N L RG++ + A+ +
Sbjct: 281 DFIDAYKSLGQAYRELGDFESAMESFQKALMMNQNHIQSLQLRGMMLYHHGSLQEALGNF 340
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 341 KRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 378
>gi|166368546|ref|YP_001660819.1| hypothetical protein MAE_58050 [Microcystis aeruginosa NIES-843]
gi|166090919|dbj|BAG05627.1| tetratricopeptide TPR_2 [Microcystis aeruginosa NIES-843]
Length = 741
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 133/268 (49%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R + K D +RG+A N G++ AI+ +D+ L+ P Y EA RG A L
Sbjct: 163 RALEFKPDDPDAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRL 222
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+ + A++ P +AW RG A A LG EAI +ALEF+P+ D + RGI
Sbjct: 223 EEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGI 282
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F A+ ++ ++ A+ Y G+AL ++G +++A ++ KA++ ++
Sbjct: 283 ALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYH 342
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EAW + ++L E+A+ + L I +A++ RG+ L LG+ ++AI
Sbjct: 343 EAWYNRGIALKNLGRLEEAIASWDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRA 402
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P E Y R +G + EA+
Sbjct: 403 LEIKPDKHEAWYNRGVALGNLGRFEEAI 430
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ I D+ +RG+A N G++ AI+ +D+ L+ P P+A RG A
Sbjct: 123 AIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGVAL 182
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI+ + +A++ P EAW RG A LG EAI +ALEF+P+ D
Sbjct: 183 GNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASWDRALEFKPDDHDA 242
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI F A+ ++ ++ A+ Y G+AL+++G +++A + +A++
Sbjct: 243 WNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALE 302
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +AW + +L E+A+ + L + +A++ RG+ L LG+ ++AI
Sbjct: 303 FKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAI 362
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P E Y R +G + EA+
Sbjct: 363 ASWDRALEIKPDKHEAWYNRGVALGNLGRFEEAI 396
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 122/253 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA N G++ AI+ +D+ L+ P Y EA RG A LE AI+ + A++ P
Sbjct: 314 RGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAIASWDRALEIKP 373
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG A LG EAI +ALE +P+ + + RG+ F A+
Sbjct: 374 DKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASY 433
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++ + A+ G+AL ++G +++A ++ +A+++ + EAW + +L
Sbjct: 434 DRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGR 493
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A+ + L A++ RG+ L LG+ ++AI L I P E Y R
Sbjct: 494 LEEAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRG 553
Query: 627 SCYHAIGEYREAV 639
+ +G EA+
Sbjct: 554 VALYNLGRLEEAI 566
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D+ L+ P Y EA RG A E AI+ + A++
Sbjct: 109 NRGNALYNLGRFEQAIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFK 168
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG +AI KALEF+P+ + + RGI A+
Sbjct: 169 PDDPDAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIAS 228
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++ A+ Y G+AL+++G +++A + +A++ + +AW + +L
Sbjct: 229 WDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLG 288
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + L A++ RG+ L LG+ ++AI L P E Y R
Sbjct: 289 RFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNR 348
Query: 626 ASCYHAIGEYREAV 639
+G EA+
Sbjct: 349 GIALKNLGRLEEAI 362
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G++ AI+ +D+ L+ P EA RG A LE AI+ + A++
Sbjct: 449 NRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRLEEAIASYDRALEFK 508
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG EAI +ALE +P+ + + RG+ + A+
Sbjct: 509 PDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALYNLGRLEEAIAS 568
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++ A+ G+AL ++G +++A ++ +A++ + +AW + DL
Sbjct: 569 YDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGNALDDLG 628
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + L + +A++ RG L LG+ ++AI + I+ ++ Y +
Sbjct: 629 RLEEAIASYDRALEFKPDYHQAWYNRGNALDDLGRLEEAIASYDQAIKINSNSANAYYNK 688
Query: 626 ASCY 629
A CY
Sbjct: 689 ACCY 692
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 14/260 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA N G++ AI+ +D+ L+ P +A RG A A E AI+ + A++ P
Sbjct: 246 RGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKP 305
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG A LG EAI KALEF+P+ + + RGI A+
Sbjct: 306 DDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAIASW 365
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQ 559
+++ + A+ G+AL ++G +++A ++ +A+++ + EAW G+L +
Sbjct: 366 DRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGR 425
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
F + +A+ ++ALE DK +A++ RG+ L LG+ ++AI L I P
Sbjct: 426 FEEAIASYDRALEIKP-----DKH--EAWYNRGVALGNLGRFEEAIASYDRALEIKPDKH 478
Query: 620 ECLYLRASCYHAIGEYREAV 639
E Y R +G EA+
Sbjct: 479 EAWYNRGVALGNLGRLEEAI 498
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 128/261 (49%), Gaps = 14/261 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AI+ +D+ L+ P +A RG A A E AI+ + A++
Sbjct: 211 NRGIALGNLGRLEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFK 270
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A A LG EAI +ALEF+P+ D + RGI F A+
Sbjct: 271 PDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIAS 330
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
++ + A+ G+AL ++G ++A + +A+++ + EAW G+L
Sbjct: 331 YDKALEFKPDYHEAWYNRGIALKNLGRLEEAIASWDRALEIKPDKHEAWYNRGVALGNLG 390
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+F + +A+ ++ALE DK +A++ RG+ L LG+ ++AI L I P
Sbjct: 391 RFEEAIASYDRALEIKP-----DKH--EAWYNRGVALGNLGRFEEAIASYDRALEIKPDK 443
Query: 619 IECLYLRASCYHAIGEYREAV 639
E Y R +G + EA+
Sbjct: 444 HEAWYNRGVALGNLGRFEEAI 464
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 124/274 (45%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ I D+ +RG+A N G++ AI+ +D+ L+ P P+A RG A
Sbjct: 55 AIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEIKPDDPDAWNNRGNAL 114
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI+ + A++ P EAW RG A LG +AI +ALEF+P+ D
Sbjct: 115 YNLGRFEQAIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFKPDDPDA 174
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ F A+ ++ + A+ G+AL ++G ++A + +A++
Sbjct: 175 WYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASWDRALE 234
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +AW + +L E+A+ + L A++ RG+ L LG+ ++AI
Sbjct: 235 FKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAI 294
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L P + + R +G + EA+
Sbjct: 295 ASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAI 328
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 14/261 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G++ AI+ +D+ L+ P EA RG A E AI+ + A++
Sbjct: 415 NRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIK 474
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALEF+P+ D + RG+ F A+
Sbjct: 475 PDKHEAWYNRGVALGNLGRLEEAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEEAIAS 534
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
+++ + A+ G+AL ++G ++A ++ +A++ + +AW G+L
Sbjct: 535 YDRALEIKPDKHEAWYNRGVALYNLGRLEEAIASYDRALEFKPDDPDAWNNRGVALGNLG 594
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+F Q +A+ ++ALE A++ RG L LG+ ++AI L P
Sbjct: 595 RFEQAIASYDRALEFKPDD-------PDAWYNRGNALDDLGRLEEAIASYDRALEFKPDY 647
Query: 619 IECLYLRASCYHAIGEYREAV 639
+ Y R + +G EA+
Sbjct: 648 HQAWYNRGNALDDLGRLEEAI 668
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 129/260 (49%), Gaps = 14/260 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA N G++ AI+ +D+ L+ P +A RG A E AI+ + +A++ P
Sbjct: 280 RGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKP 339
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG A LG EAI +ALE +P+ + + RG+ F A+
Sbjct: 340 DYHEAWYNRGIALKNLGRLEEAIASWDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASY 399
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQ 559
+++ + A+ G+AL ++G +++A ++ +A+++ + EAW G+L +
Sbjct: 400 DRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGR 459
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
F + +A+ ++ALE DK +A++ RG+ L LG+ ++AI L P +
Sbjct: 460 FEEAIASYDRALEIKP-----DKH--EAWYNRGVALGNLGRLEEAIASYDRALEFKPDDP 512
Query: 620 ECLYLRASCYHAIGEYREAV 639
+ Y R +G + EA+
Sbjct: 513 DAWYNRGVALGNLGRFEEAI 532
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G++ AI+ +D+ L+ P EA RG A E AI+ + A++
Sbjct: 381 NRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIK 440
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALE +P+ + + RG+ A+
Sbjct: 441 PDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRLEEAIAS 500
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++ A+ G+AL ++G +++A ++ +A+++ + EAW + +L
Sbjct: 501 YDRALEFKPDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALYNLG 560
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + L A++ RG+ L LG+ ++AI L P + + Y R
Sbjct: 561 RLEEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNR 620
Query: 626 ASCYHAIGEYREAV 639
+ +G EA+
Sbjct: 621 GNALDDLGRLEEAI 634
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 114/244 (46%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +D+ L+ P Y EA RG A E AI+ + A++ P +AW R
Sbjct: 51 QYQEAIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEIKPDDPDAWNNR 110
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG +AI +ALE +P+ + + RG+ F A+ ++ +
Sbjct: 111 GNALYNLGRFEQAIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFKPD 170
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G+AL ++G +++A ++ KA++ ++ EAW + +L E+A+
Sbjct: 171 DPDAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASWD 230
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ L A++ RG+ L LG+ ++AI L P + + R +G +
Sbjct: 231 RALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLGRF 290
Query: 636 REAV 639
EA+
Sbjct: 291 EEAI 294
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 14/261 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AI+ +D+ L+ P EA RG A E AI+ + A++
Sbjct: 347 NRGIALKNLGRLEEAIASWDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIK 406
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALE +P+ + + RG+ F A+
Sbjct: 407 PDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIAS 466
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
+++ + A+ G+AL ++G ++A ++ +A++ + +AW G+L
Sbjct: 467 YDRALEIKPDKHEAWYNRGVALGNLGRLEEAIASYDRALEFKPDDPDAWYNRGVALGNLG 526
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+F + +A+ ++ALE DK +A++ RG+ L+ LG+ ++AI L P +
Sbjct: 527 RFEEAIASYDRALEIKP-----DKH--EAWYNRGVALYNLGRLEEAIASYDRALEFKPDD 579
Query: 619 IECLYLRASCYHAIGEYREAV 639
+ R +G + +A+
Sbjct: 580 PDAWNNRGVALGNLGRFEQAI 600
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 14/251 (5%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ F++++ P + + +GT + + + AI+ + A++ P EAW R
Sbjct: 17 RYQDALKGFNRLVSLLPQWEDGWFYQGTTFDYLEQYQEAIASYDRALEIKPDYHEAWYNR 76
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG +AI +ALE +P+ D + RG + F A+ +++ +
Sbjct: 77 GVALGNLGRFEQAIASYDRALEIKPDDPDAWNNRGNALYNLGRFEQAIASYDRALEIKPD 136
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSE 568
A+ G+AL ++G +++A ++ +A++ + +AW G+L +F Q +A+ +
Sbjct: 137 YHEAWYNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEQAIASYD 196
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
KALE + +A++ RG+ L LG+ ++AI L P + + R
Sbjct: 197 KALE-------FKPDYHEAWYNRGIALGNLGRLEEAIASWDRALEFKPDDHDAWNYRGIA 249
Query: 629 YHAIGEYREAV 639
+G + EA+
Sbjct: 250 LANLGRFEEAI 260
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R + K D +RG+A N G++ AI+ +D+ L+ P EA RG A L
Sbjct: 503 RALEFKPDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALYNLGRL 562
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+ + A++ P +AW RG A LG +AI +ALEF+P+ D + RG
Sbjct: 563 EEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGN 622
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
A+ ++ + A+ G AL +G ++A ++ +AI+++ N
Sbjct: 623 ALDDLGRLEEAIASYDRALEFKPDYHQAWYNRGNALDDLGRLEEAIASYDQAIKINSNSA 682
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
A+ + Y N E A+E LQ+ + +D +
Sbjct: 683 NAYYNKACCYGLQNNVELAIENLQRAINLDVEY 715
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ K + A++ + V L + + + Y G + +Y++A ++ +A+++ ++ EA
Sbjct: 13 YELKRYQDALKGFNRLVSLLPQWEDGWFYQGTTFDYLEQYQEAIASYDRALEIKPDYHEA 72
Query: 554 W-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
W G+L +F Q +A+ ++ALE I A++ RG L+ LG+ ++AI
Sbjct: 73 WYNRGVALGNLGRFEQAIASYDRALE-------IKPDDPDAWNNRGNALYNLGRFEQAIA 125
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P E Y R +G + +A+
Sbjct: 126 SYDRALEIKPDYHEAWYNRGVALGNLGRFEQAI 158
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQ 70
Y L + + I D + + A R L +L + +AI D L +
Sbjct: 115 YNLGRFEQAIASYDRALEIKPDYHEAWYNRG--VALGNLGRFEQAIASYDRALEFKPDDP 172
Query: 71 DIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
D NR L + I DKAL+ P +A+ +G A LGR EEA++ W++
Sbjct: 173 DAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASWDRA 232
Query: 130 YE 131
E
Sbjct: 233 LE 234
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L + +AI D L + D N R L + I DKAL+ P +
Sbjct: 284 LANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHE 343
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
A+ +G A LGR EEA++ W++ E
Sbjct: 344 AWYNRGIALKNLGRLEEAIASWDRALE 370
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 53/115 (46%)
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L L + Y+ A + + + L + + W + + L ++A+ + L I +
Sbjct: 10 LKLYELKRYQDALKGFNRLVSLLPQWEDGWFYQGTTFDYLEQYQEAIASYDRALEIKPDY 69
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+A++ RG+ L LG+ ++AI L I P + + R + + +G + +A+
Sbjct: 70 HEAWYNRGVALGNLGRFEQAIASYDRALEIKPDDPDAWNNRGNALYNLGRFEQAI 124
>gi|395531630|ref|XP_003767878.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 1
[Sarcophilus harrisii]
Length = 860
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 135/253 (53%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + Q + E A+ + + I P
Sbjct: 154 IGSGLYDEAIRHFSSMLQEEPELVSAIYGRGIAYGKKGLQDIKNAELALFELSRVITLEP 213
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG ++F +D+ A ED
Sbjct: 214 DRPEVFEQRAEILSPLGRISEAVSDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDF 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 273 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGN 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 333 FEAATESFQRALILNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 392
Query: 627 SCYHAIGEYREAV 639
+ A+G + E +
Sbjct: 393 LSHVAMGHFYEGI 405
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V+ ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 235 AVSDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 294
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + +AL N L
Sbjct: 295 HRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQRALILNQNHVQTL 354
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G + + +A K +
Sbjct: 355 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGHFYEGIKAQTKVM 412
>gi|351708630|gb|EHB11549.1| Tetratricopeptide repeat protein 13 [Heterocephalus glaber]
Length = 845
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 135/253 (53%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 139 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 198
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG ++F +D+ A ED
Sbjct: 199 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDF 257
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L++ +A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 258 QQSLELNRNQPTAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 317
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G +A+K+ L ++P N C Y++
Sbjct: 318 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLPEALKNFKRCLQLEPYNEVCQYMKG 377
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 378 LSHVAMGQFYEGI 390
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 220 AVNDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFF 279
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 280 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 339
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 340 QLRGMMLYHHGSLPEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 397
>gi|386002705|ref|YP_005921004.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357210761|gb|AET65381.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 660
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 144/583 (24%), Positives = 243/583 (41%), Gaps = 75/583 (12%)
Query: 92 CDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLE-LEELL 150
D++L LDP L +A++L+G E AL+ D + +E E L
Sbjct: 88 LDRSLALDPDLAEAWVLRG--------------------EIALYNLTDREMAVEAFERAL 127
Query: 151 TAAKQDRSVTCEYDVSNSMSSLTVSESGLNA-NDKMSETSEN----HNKSDICDSSSQSR 205
+D V Y++ N++S L + L A N ++ EN +N+ I + +
Sbjct: 128 GIDPEDGVVW--YELGNALSFLGRVDEALQAYNRSLTIDPENGKAWNNRGLILGALGRYE 185
Query: 206 DVSETCSKS-SHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKST 264
+ + + ++ S DPDL + ++ + L + GS G+
Sbjct: 186 EAASSFERAISSDPDLAAAWQNRGNALRALGRPEEALECYASALAIDSGLVGSWKGAAEL 245
Query: 265 --HASRDASEINRQSSDDFDICNGPIDKASVNERH------GRQTNGTHDVHDKLSSDS- 315
RD + R D + P DKA+ N+R GR L +D
Sbjct: 246 LRALGRDEEALARL---DGAVGADPGDKAAWNDRGLILGVLGRYEEAVESFDAALRADPG 302
Query: 316 ------------ASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAK 363
A+L S ESY++S D + + +R + F + E
Sbjct: 303 YLLAWNNRGLALANLGRSEEALESYNRSIDIDPSFALAWYNRGRALFDLERYDE------ 356
Query: 364 RNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
V + + F L+ RG A G+ A+ +D+ L+ DP Y A
Sbjct: 357 -----AVEAYDSALEVEPAFALAWNNRGAALAALGREEEALESYDRALEIDPGYEIAWYN 411
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG+ + AI F EAI+ NP++ +AW +G A + EA+ KALE +P
Sbjct: 412 RGSVLYLEGRYFDAIKAFDEAIRFNPTSADAWHSKGHALYQMRRPGEALVCYEKALELDP 471
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSA---CVKLDKENKSAYTYLGLALSSIGEYKKAE 537
A+ H RG+ D N A E A ++LD E + + G+ S G ++A
Sbjct: 472 GRAETWHHRGVA---LADLNRAAEAAEAFDRALELDPEYEPPWYRKGILAYSSGRPEEAL 528
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+A +LD EAW + L ++++ALE + + L D ++ ++ RG++L
Sbjct: 529 AHFTRAAELDPGHAEAWNNRGWILFTLGDTDEALESIDRALEADTALAEGWNNRGVVLTA 588
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLR-ASCYHAIGEYREAV 639
LG++++A++ + + IDP++ + AS YH +G YREA
Sbjct: 589 LGKNEEALEAYNRTIDIDPAHPRAWNNKGASLYH-LGRYREAA 630
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 1/247 (0%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAW 452
EG A+S D+ L DP EA + RG + + E A+ F A+ +P G W
Sbjct: 78 EGAIDLALSSLDRSLALDPDLAEAWVLRGEIALYNLTDREMAVEAFERALGIDPEDGVVW 137
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
G A + LG EA+Q +++L +P + + RG++ + A +
Sbjct: 138 YELGNALSFLGRVDEALQAYNRSLTIDPENGKAWNNRGLILGALGRYEEAASSFERAISS 197
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
D + +A+ G AL ++G ++A E + A+ +D + +W + + L E+AL
Sbjct: 198 DPDLAAAWQNRGNALRALGRPEEALECYASALAIDSGLVGSWKGAAELLRALGRDEEALA 257
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
L + D A++ RGL+L LG++++A++ + L DP + R +
Sbjct: 258 RLDGAVGADPGDKAAWNDRGLILGVLGRYEEAVESFDAALRADPGYLLAWNNRGLALANL 317
Query: 633 GEYREAV 639
G EA+
Sbjct: 318 GRSEEAL 324
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 34/289 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEA----------- 433
+RG+ G+Y A S F++ + DP A RG A RA R EA
Sbjct: 173 NRGLILGALGRYEEAASSFERAISSDPDLAAAWQNRGNALRALGRPEEALECYASALAID 232
Query: 434 ----------------------AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
A++ A+ ++P AW RG LG EA++
Sbjct: 233 SGLVGSWKGAAELLRALGRDEEALARLDGAVGADPGDKAAWNDRGLILGVLGRYEEAVES 292
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
AL +P + RG+ A+E + + +D A+ G AL +
Sbjct: 293 FDAALRADPGYLLAWNNRGLALANLGRSEEALESYNRSIDIDPSFALAWYNRGRALFDLE 352
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
Y +A EA+ A++++ F AW + L E+ALE + L ID + A++ R
Sbjct: 353 RYDEAVEAYDSALEVEPAFALAWNNRGAALAALGREEEALESYDRALEIDPGYEIAWYNR 412
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
G +L+ G++ AIK + +P++ + + + + + EA++
Sbjct: 413 GSVLYLEGRYFDAIKAFDEAIRFNPTSADAWHSKGHALYQMRRPGEALV 461
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 17/134 (12%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L + + + D +R D A R + LA L +L +++++I I S Y
Sbjct: 283 LGRYEEAVESFDAALRADPGYLLAWNNRGLALANLGRSEEALESYNRSIDIDPSFALAWY 342
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR LE + + D AL+++P A+ +G A +ALGR+EEAL ++
Sbjct: 343 ------NRGRALFDLERYDEAVEAYDSALEVEPAFALAWNNRGAALAALGREEEALESYD 396
Query: 128 K------GYEHALH 135
+ GYE A +
Sbjct: 397 RALEIDPGYEIAWY 410
>gi|390477670|ref|XP_002807781.2| PREDICTED: tetratricopeptide repeat protein 13 [Callithrix jacchus]
Length = 726
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 73 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 132
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 133 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 191
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 192 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 251
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 252 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 311
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 312 LSHVAMGQFYEGI 324
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 154 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 213
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 214 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 273
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 274 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 331
>gi|50949446|emb|CAH10599.1| hypothetical protein [Homo sapiens]
Length = 785
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 79 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 138
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 139 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 197
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 198 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 257
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 258 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 317
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 318 LSHVAMGQFYEGI 330
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 160 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 219
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 220 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 279
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 280 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 337
>gi|403300215|ref|XP_003940847.1| PREDICTED: tetratricopeptide repeat protein 13 [Saimiri boliviensis
boliviensis]
Length = 836
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 130 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 189
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 190 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 248
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 249 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 308
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 309 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 368
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 369 LSHVAMGQFYEGI 381
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 211 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 270
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 271 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 330
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 331 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 388
>gi|355746300|gb|EHH50925.1| hypothetical protein EGM_01832, partial [Macaca fascicularis]
Length = 775
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 136/260 (52%), Gaps = 6/260 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFT 439
L+ + G Y AI F +L+E+P A+ GRG A + + E A+ + +
Sbjct: 62 LAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELS 121
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+
Sbjct: 122 RVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDY 180
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A ED ++L+K A Y GL G K+A E+ +A++ +F++A+ L Q
Sbjct: 181 ATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQ 240
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N
Sbjct: 241 AYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 300
Query: 620 ECLYLRASCYHAIGEYREAV 639
C Y++ + A+G++ E +
Sbjct: 301 VCQYMKGLSHVAMGQFYEGI 320
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 150 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 209
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 210 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 269
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 270 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 327
>gi|395849727|ref|XP_003797467.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 1 [Otolemur
garnettii]
Length = 863
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 157 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 216
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 217 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 275
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 276 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 335
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 336 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 395
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 396 LSHVAMGQFYEGI 408
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 370 VTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 239 VNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFH 298
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 299 RGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQ 358
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 359 LRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 415
>gi|47222450|emb|CAG12970.1| unnamed protein product [Tetraodon nigroviridis]
Length = 788
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 143/274 (52%), Gaps = 15/274 (5%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAA 434
+V+ L+ G + G Y AI F +L+ DP A+ GRG A ++ Q + + A
Sbjct: 52 NVNEELAIGYVLIGNGLYDEAIKHFSLLLQGDPELVSAIYGRGMAYGKKSLQDIKNADLA 111
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + I P+ E +++R + + LG EA+ DLSKA++ +P SA + RG + F
Sbjct: 112 LYELNRVITLEPNWPEVYEQRAEILSPLGRISEALADLSKAIQLQP-SARLYRHRGTLLF 170
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ AA+ED ++L K A Y GL G K+A E +A++L +F++A+
Sbjct: 171 ISEDYVAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFKEALKLKSDFIDAY 230
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--- 611
L Q Y++L + E A+E Q+ L +D+ ++ LRG++L+ G ++AI +
Sbjct: 231 KSLGQAYRELGDFESAMESFQRALLLDQNHIQSLQLRGMMLYHHGSLQEAIGNFKVQVSP 290
Query: 612 ------LGIDPSNIECLYLRASCYHAIGEYREAV 639
L ++P N C Y++ + A+G++ E +
Sbjct: 291 FTWLRCLQLEPYNEVCQYMKGLSHVAMGQFYEGI 324
>gi|395728894|ref|XP_002809357.2| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 13
[Pongo abelii]
Length = 807
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 112 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 171
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 172 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 230
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 231 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 290
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 291 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 350
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 351 LSHVAMGQFYEGI 363
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 193 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 252
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 253 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 312
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 313 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 370
>gi|384207675|ref|YP_005593395.1| hypothetical protein Bint_0181 [Brachyspira intermedia PWS/A]
gi|343385325|gb|AEM20815.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 257
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 119/212 (56%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+R+ + AI F +AI+ +P+ + RG + LG+ EAI+D KA+E PN +D +
Sbjct: 16 ERKYKEAIESFDKAIELDPNNSNTYYNRGITKVNLGQYEEAIKDYDKAIELNPNDSDTYN 75
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RGI + + A++D ++LD + +Y G+A ++G+YK+A + + KAI+LD
Sbjct: 76 NRGIAKYNLGQYQEAIKDYDKAIELDSNDSDSYNNRGIAKKNLGQYKEAIKDYDKAIELD 135
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
N+ A+ + ++L E+A++ + + +D S AY+ RGL LGQ+K+AIKD
Sbjct: 136 HNYSSAYSNRGIAKKNLGLYEEAIKDYDKAIELDTNDSNAYNNRGLAKGSLGQYKEAIKD 195
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++PS + R +G+Y++A+
Sbjct: 196 FDKSIELNPSYSDVYNNRGVSKENLGQYKDAL 227
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 123/235 (52%), Gaps = 14/235 (5%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ E KY AI FD+ ++ DP RG + + E AI D+ +AI+ NP+
Sbjct: 10 GLNYFKERKYKEAIESFDKAIELDPNNSNTYYNRGITKVNLGQYEEAIKDYDKAIELNPN 69
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + RG A+ LG+ EAI+D KA+E + N +D + RGI + A++D
Sbjct: 70 DSDTYNNRGIAKYNLGQYQEAIKDYDKAIELDSNDSDSYNNRGIAKKNLGQYKEAIKDYD 129
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQF 560
++LD SAY+ G+A ++G Y++A + + KAI+LD N A+ G L Q+
Sbjct: 130 KAIELDHNYSSAYSNRGIAKKNLGLYEEAIKDYDKAIELDTNDSNAYNNRGLAKGSLGQY 189
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ + + +K++E ++ +S Y+ RG+ LGQ+K A+KD L +D
Sbjct: 190 KEAIKDFDKSIE-------LNPSYSDVYNNRGVSKENLGQYKDALKDYKKALELD 237
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 89/162 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ N G+Y AI +D+ ++ D ++ RG A+ + + AI D+ +AI+ +
Sbjct: 76 NRGIAKYNLGQYQEAIKDYDKAIELDSNDSDSYNNRGIAKKNLGQYKEAIKDYDKAIELD 135
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ RG A+ LG EAI+D KA+E + N ++ + RG+ + A++D
Sbjct: 136 HNYSSAYSNRGIAKKNLGLYEEAIKDYDKAIELDTNDSNAYNNRGLAKGSLGQYKEAIKD 195
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++L+ Y G++ ++G+YK A + + KA++LD
Sbjct: 196 FDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYKKALELD 237
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLL 63
++Y L + + I + D+ + +DS + + R I L +++++ KAI LD
Sbjct: 80 AKYNLGQYQEAIKDYDKAIELDSNDSDSYNNRGIAKKNLGQYKEAIKDYDKAIE-LDHNY 138
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
+ +Y NR L L++ I+D DKA++LD AY +G A +LG+ +EA+
Sbjct: 139 SSAY-----SNRGIAKKNLGLYEEAIKDYDKAIELDTNDSNAYNNRGLAKGSLGQYKEAI 193
Query: 124 SVWEKGYE 131
++K E
Sbjct: 194 KDFDKSIE 201
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSL-----RNWSKAIRILDSLLAQSY 67
L + + I + D+ + +D +SA + R K L +++ KAI LD+ + +Y
Sbjct: 118 LGQYKEAIKDYDKAIELDHNYSSAYSNRGIAKKNLGLYEEAIKDYDKAIE-LDTNDSNAY 176
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR L +K I+D DK+++L+P+ Y +G + LG+ ++AL ++
Sbjct: 177 -----NNRGLAKGSLGQYKEAIKDFDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYK 231
Query: 128 KGYE 131
K E
Sbjct: 232 KALE 235
>gi|426334205|ref|XP_004028650.1| PREDICTED: tetratricopeptide repeat protein 13 [Gorilla gorilla
gorilla]
Length = 782
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 76 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 135
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 136 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 194
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 195 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 254
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 255 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 314
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 315 LSHVAMGQFYEGI 327
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 157 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 216
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 217 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 276
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 277 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 334
>gi|22761440|dbj|BAC11586.1| unnamed protein product [Homo sapiens]
Length = 860
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 154 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 213
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 214 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 273 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 333 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 392
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 393 LSHVAMGQFYEGI 405
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 235 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 294
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 295 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 354
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 355 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 412
>gi|281350820|gb|EFB26404.1| hypothetical protein PANDA_005322 [Ailuropoda melanoleuca]
Length = 770
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 136/260 (52%), Gaps = 6/260 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFT 439
L+ + G Y AI F +L+E+P A+ GRG A + + E A+ + +
Sbjct: 57 LAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELS 116
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+
Sbjct: 117 RVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDY 175
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A ED ++L+K A Y GL G K+A E+ +A++ +F++A+ L Q
Sbjct: 176 ATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQ 235
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
Y++L N E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N
Sbjct: 236 AYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNE 295
Query: 620 ECLYLRASCYHAIGEYREAV 639
C Y++ + A+G++ E +
Sbjct: 296 VCQYMKGLSHVAMGQFYEGI 315
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 145 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 204
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 205 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 264
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 265 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 322
>gi|425447216|ref|ZP_18827207.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389732284|emb|CCI03758.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 605
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 138/271 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
V + S+ S + + +G N +Y AI+ + + ++ +P Y EA RG +
Sbjct: 271 TVAQSSQPNSTTAETYFKQGEDYRNNNQYDKAIAAYTKAIEINPQYAEAYKNRGIVYLYL 330
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ E A++D +AI+ NP A+ RG L E +A+ D +KA+E P
Sbjct: 331 KDYEKAMADNNKAIEINPQYSNAYNNRGNVYYKLKEYDKAMADYNKAIEINPQLFQAYDN 390
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + K+++ A+ D + ++++ ++ AY G + +Y+KA + + KAI+++
Sbjct: 391 RGSFYYNLKEYDKAIADYNKVIEINPQDAEAYYKRGYVYYDLKDYEKAIKDYNKAIEINP 450
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+++ FY L +KA++ + + I+ + + AY+ RG + H L ++ KAIKD
Sbjct: 451 QNADSYYLRGSFYYILKEYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNLKEYDKAIKDY 510
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ L I+P + Y R + Y + EY +A+
Sbjct: 511 NKALEINPQYADAYYTRGNVYLHLKEYDKAI 541
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 133/254 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + Y A++ ++ ++ +P Y A RG +E + A++D+ +AI+ N
Sbjct: 322 NRGIVYLYLKDYEKAMADNNKAIEINPQYSNAYNNRGNVYYKLKEYDKAMADYNKAIEIN 381
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG L E +AI D +K +E P A+ ++RG V + KD+ A++D
Sbjct: 382 PQLFQAYDNRGSFYYNLKEYDKAIADYNKVIEINPQDAEAYYKRGYVYYDLKDYEKAIKD 441
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ +N +Y G + EY KA + + KAI+++ A+ + Y +L
Sbjct: 442 YNKAIEINPQNADSYYLRGSFYYILKEYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNLK 501
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+KA++ + L I+ +++ AY+ RG + L ++ KAIKD + + I+P + R
Sbjct: 502 EYDKAIKDYNKALEINPQYADAYYTRGNVYLHLKEYDKAIKDYNKAIEINPQYADAYNNR 561
Query: 626 ASCYHAIGEYREAV 639
Y + +Y +A+
Sbjct: 562 GVVYEILKDYEKAI 575
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 129/231 (55%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +Y A++ +++ ++ +P +A RG+ +E + AI+D+ + I+ N
Sbjct: 356 NRGNVYYKLKEYDKAMADYNKAIEINPQLFQAYDNRGSFYYNLKEYDKAIADYNKVIEIN 415
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ +RG L + +AI+D +KA+E P +AD + RG + K+++ A++D
Sbjct: 416 PQDAEAYYKRGYVYYDLKDYEKAIKDYNKAIEINPQNADSYYLRGSFYYILKEYDKAIKD 475
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ +N AY G ++ EY KA + + KA++++ + +A+ Y L
Sbjct: 476 YNKAIEINPQNAIAYNNRGYVYHNLKEYDKAIKDYNKALEINPQYADAYYTRGNVYLHLK 535
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+KA++ + + I+ +++ AY+ RG++ L ++KAIKD + L I+P
Sbjct: 536 EYDKAIKDYNKAIEINPQYADAYNNRGVVYEILKDYEKAIKDYNKALEINP 586
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 67/124 (54%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI +++ ++ +P A RG +E + AI D+ +A++ NP +A+ R
Sbjct: 468 EYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNLKEYDKAIKDYNKALEINPQYADAYYTR 527
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L E +AI+D +KA+E P AD + RG+V KD+ A++D + ++++ +
Sbjct: 528 GNVYLHLKEYDKAIKDYNKAIEINPQYADAYNNRGVVYEILKDYEKAIKDYNKALEINPQ 587
Query: 516 NKSA 519
+ A
Sbjct: 588 HPYA 591
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/122 (19%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLL-AQSYEI 69
Y+L + K + + ++ + ++ + A R +L+ + KAI + ++ +
Sbjct: 362 YKLKEYDKAMADYNKAIEINPQLFQAYDNRGSF--YYNLKEYDKAIADYNKVIEINPQDA 419
Query: 70 QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
+ R + Y L+ ++ I+D +KA++++P +Y L+G + L ++A+ + K
Sbjct: 420 EAYYKRGYVYYDLKDYEKAIKDYNKAIEINPQNADSYYLRGSFYYILKEYDKAIKDYNKA 479
Query: 130 YE 131
E
Sbjct: 480 IE 481
>gi|410334037|gb|JAA35965.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
Length = 859
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 154 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 213
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 214 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 273 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 333 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 392
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 393 LSHVAMGQFYEGI 405
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 235 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 294
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 295 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 354
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 355 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 412
>gi|170784867|ref|NP_078801.3| tetratricopeptide repeat protein 13 isoform a [Homo sapiens]
gi|212276494|sp|Q8NBP0.3|TTC13_HUMAN RecName: Full=Tetratricopeptide repeat protein 13; Short=TPR repeat
protein 13
Length = 860
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 154 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 213
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 214 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 273 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 333 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 392
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 393 LSHVAMGQFYEGI 405
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 235 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 294
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 295 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 354
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 355 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 412
>gi|114573138|ref|XP_001149480.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 4 [Pan
troglodytes]
gi|410218578|gb|JAA06508.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
gi|410264780|gb|JAA20356.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
gi|410306726|gb|JAA31963.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
Length = 860
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 154 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 213
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 214 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 273 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 333 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 392
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 393 LSHVAMGQFYEGI 405
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 235 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 294
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 295 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 354
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 355 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 412
>gi|301763435|ref|XP_002917148.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein
13-like [Ailuropoda melanoleuca]
Length = 868
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 162 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 221
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 222 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 280
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 281 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 340
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 341 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 400
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 401 LSHVAMGQFYEGI 413
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 243 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 302
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 303 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 362
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 363 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 420
>gi|109020014|ref|XP_001107062.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 5 [Macaca
mulatta]
Length = 860
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 154 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 213
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 214 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 273 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 333 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 392
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 393 LSHVAMGQFYEGI 405
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 235 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 294
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 295 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 354
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 355 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 412
>gi|410975127|ref|XP_003993986.1| PREDICTED: tetratricopeptide repeat protein 13, partial [Felis
catus]
Length = 684
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 6 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 65
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 66 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 124
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 125 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 184
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 185 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 244
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 245 LSHVAMGQFYEGI 257
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 87 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 146
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 147 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 206
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 207 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 264
>gi|332266747|ref|XP_003282359.1| PREDICTED: tetratricopeptide repeat protein 13, partial [Nomascus
leucogenys]
Length = 738
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 32 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 91
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 92 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 150
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 151 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 210
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 211 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 270
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 271 LSHVAMGQFYEGI 283
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 113 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 172
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 173 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 232
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 233 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 290
>gi|417412887|gb|JAA52802.1| Putative o-linked n-acetylglucosamine transferase ogt, partial
[Desmodus rotundus]
Length = 842
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 136 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVISLEP 195
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG ++F +D+ A ED
Sbjct: 196 DRPEVFEQRAEILSPLGRISEAVSDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDF 254
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L++ A Y GL G K+A E+ A++ +F++A+ L Q Y++L N
Sbjct: 255 QQSLELNRNQPIAMLYKGLTFFHRGLLKEAIESFKDALKQKVDFIDAYKSLGQAYRELGN 314
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 315 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 374
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 375 LSHVAMGQFYEGI 387
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V+ ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 217 AVSDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELNRNQPIAMLYKGLTFF 276
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F +A++ +A+K GQA LG A + KAL N L
Sbjct: 277 HRGLLKEAIESFKDALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 336
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 337 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 394
>gi|73952538|ref|XP_546094.2| PREDICTED: tetratricopeptide repeat protein 13 isoform 1 [Canis
lupus familiaris]
Length = 859
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 153 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 212
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 213 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 271
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 272 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 331
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 332 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 391
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 392 LSHVAMGQFYEGI 404
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 234 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 293
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 294 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 353
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 354 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 411
>gi|194042608|ref|XP_001926697.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Sus
scrofa]
Length = 858
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 152 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDVKNAELALFELSRVITLEP 211
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 212 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 270
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 271 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 330
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 331 FEAATESFQKALLLNQNHVQTLQLRGVMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 390
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 391 LSHVAMGQFYEGI 403
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 233 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 292
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 293 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 352
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 353 QLRGVMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 410
>gi|440909805|gb|ELR59678.1| Tetratricopeptide repeat protein 13, partial [Bos grunniens mutus]
Length = 770
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 135/260 (51%), Gaps = 6/260 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFT 439
L+ + G Y AI F +L+E+P A+ GRG A + + E A+ + +
Sbjct: 57 LAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELS 116
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I P E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+
Sbjct: 117 RVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDY 175
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A ED ++L+K A Y GL G K+A E+ +A++ +F++A+ L Q
Sbjct: 176 ATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQ 235
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
Y++L N E A E Q+ L +++ + LRG++L+ G +A+K+ L ++P N
Sbjct: 236 AYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNE 295
Query: 620 ECLYLRASCYHAIGEYREAV 639
C Y++ + A+G++ E +
Sbjct: 296 VCQYMKGLSHVAMGQFYEGI 315
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 145 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 204
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 205 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 264
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 265 QLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 322
>gi|397508273|ref|XP_003824586.1| PREDICTED: tetratricopeptide repeat protein 13 [Pan paniscus]
Length = 834
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 143 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 202
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 203 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 261
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 262 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 321
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 322 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 381
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 382 LSHVAMGQFYEGI 394
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 224 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 283
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 284 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 343
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 344 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 401
>gi|224071279|ref|XP_002303386.1| predicted protein [Populus trichocarpa]
gi|222840818|gb|EEE78365.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/76 (75%), Positives = 67/76 (88%)
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ANS KAL+C+ QVL ID RF+KAYHLRGLLL+G+G+H+KAIKDLS GL I+ +NIE LY
Sbjct: 1 MANSTKALDCINQVLQIDSRFAKAYHLRGLLLYGMGEHRKAIKDLSIGLSIENANIESLY 60
Query: 624 LRASCYHAIGEYREAV 639
LRASCYHAIGEY EAV
Sbjct: 61 LRASCYHAIGEYGEAV 76
>gi|329663548|ref|NP_001192789.1| tetratricopeptide repeat protein 13 precursor [Bos taurus]
gi|296472256|tpg|DAA14371.1| TPA: tetratricopeptide repeat domain 13 isoform 1 [Bos taurus]
Length = 858
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 133/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 152 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 211
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 212 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 270
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 271 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 330
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G +A+K+ L ++P N C Y++
Sbjct: 331 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKG 390
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 391 LSHVAMGQFYEGI 403
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 233 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 292
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 293 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 352
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 353 QLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 410
>gi|124024560|ref|YP_001018867.1| hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT
9303]
gi|123964846|gb|ABM79602.1| Hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT
9303]
Length = 706
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 147/285 (51%), Gaps = 5/285 (1%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPM 413
N K+ K + +K+I +D + +RG+A+ N G Y AI+ +++ + +P
Sbjct: 391 GNTKKQLKDYQGAIADYNKAIELDPQHAYGYYNRGLAKKNLGDYQGAIADYNKAITINPQ 450
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ +A RG A+ + + AISD+ +AI+ +P A+ RG +++ L + AI D +
Sbjct: 451 HADAFNNRGNAKDGLGDTQGAISDYNKAIELDPQHTLAYNNRGSSKSDLKDYQGAIPDYN 510
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
KA+E P AD + RGI D A+ D + ++LD ++ A+ G+A ++G++
Sbjct: 511 KAIEINPQYADAFNNRGIAKDNSGDHQGAIADYNKAIELDPQHAFAFNNRGIAKDNLGDH 570
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ A + KAI++D + A+ + DL + + A+ + + I+ +++ AY RG
Sbjct: 571 QGAIADYNKAIEIDPKYASAYNNRGYAKSDLKDYQGAIADFNKAIAINPQYALAYTNRGW 630
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ G + A+KD + L I P++ L R HA+G+ R A
Sbjct: 631 FKYLQGDFQDALKDANKALAITPNDGATLDTRGLAKHALGQDRSA 675
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ N G + AI+ +++ ++ DP Y A RG A++ ++ + AI+DF +AI N
Sbjct: 559 NRGIAKDNLGDHQGAIADYNKAIEIDPKYASAYNNRGYAKSDLKDYQGAIADFNKAIAIN 618
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG + G+ +A++D +KAL PN L RG+ +A +D
Sbjct: 619 PQYALAYTNRGWFKYLQGDFQDALKDANKALAITPNDGATLDTRGLAKHALGQDRSACKD 678
Query: 506 LSACVKLDKENKSAY 520
L L + S Y
Sbjct: 679 LKRASSLGYQGTSQY 693
>gi|426255520|ref|XP_004021396.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 1 [Ovis
aries]
Length = 859
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 133/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 153 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 212
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 213 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 271
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 272 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 331
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G +A+K+ L ++P N C Y++
Sbjct: 332 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKG 391
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 392 LSHVAMGQFYEGI 404
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 234 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 293
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 294 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 353
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 354 QLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 411
>gi|291402198|ref|XP_002717429.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 1
[Oryctolagus cuniculus]
Length = 865
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 159 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 218
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 219 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 277
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L++ A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 278 QQSLELNRNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 337
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 338 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 397
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 398 LSHVAMGQFYEGI 410
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 240 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQPIAMLYKGLTFF 299
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 300 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 359
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 360 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 417
>gi|301609916|ref|XP_002934497.1| PREDICTED: tetratricopeptide repeat protein 13 [Xenopus (Silurana)
tropicalis]
Length = 839
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 137/260 (52%), Gaps = 6/260 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFT 439
L+ G + G AI F +L+E+P A+ GRG A A + + E A+ + +
Sbjct: 127 LAIGYVLIGSGLQDEAIKHFSSMLQEEPDLVSAIYGRGIAYARKGLQDIKNAELALFELS 186
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I P E +++R + + LG EA+ DL++A++ +P SA + RG ++F +D+
Sbjct: 187 RVISLEPDHPEVFEQRAEILSPLGRISEALSDLTRAIQLQP-SARLYRHRGTLHFISEDY 245
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AA ED + L++ A Y GL G K+A ++ +A++ NF+EA+ L Q
Sbjct: 246 LAAQEDFQRSLGLNQNQPIAVLYKGLTFFHRGLLKEAIDSFKEALKQKSNFIEAYKSLGQ 305
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
Y++L N E A+E Q+ L +++ + LRG++L+ G ++A+ + L ++P N
Sbjct: 306 AYRELGNFEAAMENFQKALMLNQNHVQTLQLRGMMLYHHGSLQEALTNFKRCLQLEPYNE 365
Query: 620 ECLYLRASCYHAIGEYREAV 639
C Y++ + ++G + E +
Sbjct: 366 VCQYMKGLSHVSMGHFYEGI 385
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Y +A F + L + P A++ +G + L+ AI F EA++
Sbjct: 235 RGTLHFISEDYLAAQEDFQRSLGLNQNQPIAVLYKGLTFFHRGLLKEAIDSFKEALKQKS 294
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+K GQA LG A+++ KAL N L RG++ + A+ +
Sbjct: 295 NFIEAYKSLGQAYRELGNFEAAMENFQKALMLNQNHVQTLQLRGMMLYHHGSLQEALTNF 354
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ S+G + + +A K +
Sbjct: 355 KRCLQLEPYNEVCQYMKGLSHVSMGHFYEGIKAQTKVM 392
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 3/169 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++++ I+V L +G+ + G AI F + LK+ + EA G A E
Sbjct: 258 LNQNQPIAV---LYKGLTFFHRGLLKEAIDSFKEALKQKSNFIEAYKSLGQAYRELGNFE 314
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AA+ +F +A+ N + + + RG G EA+ + + L+ EP + + +G+
Sbjct: 315 AAMENFQKALMLNQNHVQTLQLRGMMLYHHGSLQEALTNFKRCLQLEPYNEVCQYMKGLS 374
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ F ++ + + D + L + + EY + AHL
Sbjct: 375 HVSMGHFYEGIKAQTKVMLNDPLPGQKASQEYLKVKYLREYSRYLHAHL 423
>gi|344278513|ref|XP_003411038.1| PREDICTED: tetratricopeptide repeat protein 13-like [Loxodonta
africana]
Length = 869
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + + P
Sbjct: 163 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVVTLEP 222
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 223 DRPEVFEQRAEILSPLGRINEAVSDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 281
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 282 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 341
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 342 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 401
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 402 LSHVAMGQFYEGI 414
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V+ ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 244 AVSDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 303
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 304 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 363
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 364 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 421
>gi|338717240|ref|XP_001916733.2| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 13
[Equus caballus]
Length = 854
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + + A+ + + I P
Sbjct: 148 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNADLALFELSRVITLEP 207
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 208 DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 266
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 267 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 326
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++
Sbjct: 327 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 386
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 387 LSHVAMGQFYEGI 399
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 229 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 288
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 289 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 348
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 349 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 406
>gi|403338793|gb|EJY68640.1| TPR Domain containing protein [Oxytricha trifallax]
Length = 979
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 131/256 (51%), Gaps = 2/256 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G A +G Y AI + + L+ P + +AL RG A E + AI D+++AI +
Sbjct: 551 SQGYAARKKGDYQQAIDFYSKALQIMPNHFKALFNRGFAYDKVGEFDLAIQDYSQAISID 610
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + +G + G+ EAI+ SKA++ EP AD H RG K +DF +A++D
Sbjct: 611 PNNAFTYYNKGISLDRKGDFDEAIKSFSKAIDLEPGKADFYHNRGFAFRKKRDFMSAIKD 670
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S +++D ++ A+ I + +AE+ +L AI++ + A HL + +
Sbjct: 671 YSTAIQIDNQHFKAFYNRAFCWDKIAKLDEAEKDYLHAIKMQPQNISALHHLGTIREKMG 730
Query: 566 NS--EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
ALE +VL +DK ++ +Y+ RGL+ ++AI D + + +D N +
Sbjct: 731 GDRLNLALENFNEVLELDKNYAPSYNGRGLVWDRFFNFEEAINDFTKAIDLDSQNAVYWH 790
Query: 624 LRASCYHAIGEYREAV 639
RA C+ +G+ +++
Sbjct: 791 NRACCFRNMGQMDKSI 806
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 107/243 (44%), Gaps = 39/243 (16%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTA--RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
A+ F+++L+ D Y + GRG R F E AI+DFT+AI + W R
Sbjct: 737 ALENFNEVLELDKNYAPSYNGRGLVWDRFF--NFEEAINDFTKAIDLDSQNAVYWHNRAC 794
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
+G+ ++I+D KA+E + ++ I RG+VN K + F ++ED S +K N
Sbjct: 795 CFRNMGQMDKSIKDFDKAIELDSTNSIIYSNRGLVNRKLERFEQSIEDYSNEIKYGPANN 854
Query: 518 -SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A+ + +G+Y +A + + IQLD + A
Sbjct: 855 IKAFNNRAYCYAKLGQYSEAIRDYSRVIQLDGENIHAL---------------------- 892
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
H RG+ L Q+K+AIKD + + IDP N + R CY ++GE
Sbjct: 893 ------------HNRGISYERLSQYKEAIKDFTRVIEIDPDNANAYFNRGCCYDSVGELD 940
Query: 637 EAV 639
A+
Sbjct: 941 LAI 943
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 49 LRNWSKAIRILDSLLAQSYE-IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
L +S+AIR ++ E I + NR Y +L +K I+D + +++DP AY
Sbjct: 868 LGQYSEAIRDYSRVIQLDGENIHALHNRGISYERLSQYKEAIKDFTRVIEIDPDNANAYF 927
Query: 108 LKGCAFSALGRKEEALSVW 126
+GC + ++G + A+S +
Sbjct: 928 NRGCCYDSVGELDLAISDY 946
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSY 67
+ + K+I + D+ + +DS + + R + + S+ ++S I+ +
Sbjct: 799 MGQMDKSIKDFDKAIELDSTNSIIYSNRGLVNRKLERFEQSIEDYSNEIK-----YGPAN 853
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
I+ NRA+CY++L + IRD + +QLD + A +G ++ L + +EA+
Sbjct: 854 NIKAFNNRAYCYAKLGQYSEAIRDYSRVIQLDGENIHALHNRGISYERLSQYKEAI 909
>gi|345319826|ref|XP_001521471.2| PREDICTED: tetratricopeptide repeat protein 13 [Ornithorhynchus
anatinus]
Length = 817
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 153/311 (49%), Gaps = 10/311 (3%)
Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
SD +S S S LS + + + K+F + +++++ L+ +
Sbjct: 57 SDCESRGSPPCESLLSLNTEKILSQAKTLAEQKRFPFA----TDNVNMNEELAIAYVLIG 112
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
G Y AI F +L+E+P A+ GRG A + + E A+ + + + P
Sbjct: 113 SGLYDEAIRHFSSMLQEEPELVSAIYGRGIAYGKKGLHDVKNAELALFELSRVVALEPDR 172
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
+ ++R + + LG EA+ DL+KA++ +P SA + RG ++F +D+ AA ED
Sbjct: 173 PDVLEQRAEILSPLGRVSEALSDLTKAIQLQP-SARLYRHRGTLHFISEDYAAAHEDFQQ 231
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+ L+ A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E
Sbjct: 232 SLDLNPNQPIAMLYKGLTFFHRGLLKEAVESFKEALKQKADFIDAYKSLGQAYRELGNFE 291
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
A E Q+ L ++ + LRG++L+ G ++A+K L ++P N C ++R
Sbjct: 292 AATESFQRALLLNHNHVQTLQLRGVMLYHHGSLQEALKSFKRCLQLEPYNEVCQHMRGLS 351
Query: 629 YHAIGEYREAV 639
+ A+G++ E +
Sbjct: 352 HVALGQFYEGI 362
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG YA+A F Q L +P P A++ +G + L+ A+ F EA++
Sbjct: 212 RGTLHFISEDYAAAHEDFQQSLDLNPNQPIAMLYKGLTFFHRGLLKEAVESFKEALKQKA 271
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG A + +AL N L RG++ + A++
Sbjct: 272 DFIDAYKSLGQAYRELGNFEAATESFQRALLLNHNHVQTLQLRGVMLYHHGSLQEALKSF 331
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 332 KRCLQLEPYNEVCQHMRGLSHVALGQFYEGIKAQTKVM 369
>gi|291234181|ref|XP_002737022.1| PREDICTED: P58IPK-like [Saccoglossus kowalevskii]
Length = 1148
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 135/254 (53%), Gaps = 5/254 (1%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA---FQRELEAAISDFTEAIQSN 445
I +N Y I +LK++P A RG A A FQ ++AI+D ++AIQ
Sbjct: 443 IVLLNTKNYDGCIEQLTSLLKDNPNIIGAYHVRGAAYAKKGFQ-SADSAIADLSKAIQLQ 501
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+A E W+RR + +LG + EA+ DL+ A+ P++ H RG V+FK +++ AA ED
Sbjct: 502 PNAPEGWERRAEIYMSLGRTNEALADLTTAITLVPSAKAYAH-RGTVHFKEENYLAAEED 560
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + + GLAL G+ K + E ++L+ ++ L Y++L
Sbjct: 561 FQKSLELDSKQSEIMHFRGLALYHQGKIKDSIEVFNTTLKLEPLCVDCRRSLGHAYRELG 620
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ E +++ L + + ++ LRG LL+ G+ +A+KD + L +D +N C Y+R
Sbjct: 621 DFETSMQHFNTALSLQEDHVQSLQLRGSLLYQSGRPLEALKDFNKCLSVDSTNEACEYMR 680
Query: 626 ASCYHAIGEYREAV 639
+ +IG+Y EAV
Sbjct: 681 GLSHASIGQYYEAV 694
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
+NEA + +T + +K+ + RG E Y +A F + L+ D E +
Sbjct: 521 TNEALADLTTAITLVPSAKAYA-----HRGTVHFKEENYLAAEEDFQKSLELDSKQSEIM 575
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
RG A Q +++ +I F ++ P + + G A LG+ ++Q + AL
Sbjct: 576 HFRGLALYHQGKIKDSIEVFNTTLKLEPLCVDCRRSLGHAYRELGDFETSMQHFNTALSL 635
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+ + L RG + ++ A++D + C+ +D N++ GL+ +SIG+Y +A +
Sbjct: 636 QEDHVQSLQLRGSLLYQSGRPLEALKDFNKCLSVDSTNEACEYMRGLSHASIGQYYEAVK 695
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
++ K +Q + FL +K +VLYI + +S+ H R
Sbjct: 696 SNAK-VQSNPPFL---------------GQKTSNEFARVLYI-REYSRYLHAR 731
>gi|334120659|ref|ZP_08494738.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333456261|gb|EGK84896.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 346
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 132/248 (53%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +G Y +A+ FDQIL+ +P +A RG + ++ + AI+D ++A+ NP
Sbjct: 9 RGLHSAKKGNYEAALEDFDQILQVNPADAKAYNNRGLVYYYMKDYQKAIADLSQALDINP 68
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG A LGE +AI+DL+ AL +PNS I + RG+V ++ A+ED
Sbjct: 69 NFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANLGNYEEAIEDY 128
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ N Y G A +GE + A E + ++L+ +++A+ + Y L +
Sbjct: 129 NRALSINSHNYKTYYNRGRAYYLLGEKEAATENFNETLRLNPKYIKAYINRGLCYHQLGD 188
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ +A+ L ID + AY+ RG + + L Q + AI+D + +DP+ ++ R
Sbjct: 189 NTQAIADYNTALGIDPQNVYAYYNRGCVRYKLKQMQLAIEDFDKAVKLDPNYVKAYLNRG 248
Query: 627 SCYHAIGE 634
+ +G+
Sbjct: 249 LALYKLGD 256
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 116/220 (52%), Gaps = 2/220 (0%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A + EAA+ DF + +Q NP+ +A+ RG + + +AI DLS+AL+ P
Sbjct: 9 RGLHSAKKGNYEAALEDFDQILQVNPADAKAYNNRGLVYYYMKDYQKAIADLSQALDINP 68
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA-YTYLGLALSSIGEYKKAEEA 539
N + RG + A+EDL+ C +K N A Y GL L+++G Y++A E
Sbjct: 69 NFFEAYLNRGNAWRHLGEHEKAIEDLN-CALANKPNSHAIYNNRGLVLANLGNYEEAIED 127
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +A+ ++ + + + + + Y L E A E + L ++ ++ KAY RGL H LG
Sbjct: 128 YNRALSINSHNYKTYYNRGRAYYLLGEKEAATENFNETLRLNPKYIKAYINRGLCYHQLG 187
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +AI D ++ LGIDP N+ Y R + + + + A+
Sbjct: 188 DNTQAIADYNTALGIDPQNVYAYYNRGCVRYKLKQMQLAI 227
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 72/147 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N G Y AI +++ L + + RG A E EAA +F E ++ N
Sbjct: 110 NRGLVLANLGNYEEAIEDYNRALSINSHNYKTYYNRGRAYYLLGEKEAATENFNETLRLN 169
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG LG++ +AI D + AL +P + + RG V +K K A+ED
Sbjct: 170 PKYIKAYINRGLCYHQLGDNTQAIADYNTALGIDPQNVYAYYNRGCVRYKLKQMQLAIED 229
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGE 532
VKLD AY GLAL +G+
Sbjct: 230 FDKAVKLDPNYVKAYLNRGLALYKLGD 256
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 79/149 (53%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
++RG+ + K ++ AA+ED ++++ + AY GL + +Y+KA +A+
Sbjct: 6 FYKRGLHSAKKGNYEAALEDFDQILQVNPADAKAYNNRGLVYYYMKDYQKAIADLSQALD 65
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ NF EA+ + ++ L EKA+E L L Y+ RGL+L LG +++AI
Sbjct: 66 INPNFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANLGNYEEAI 125
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+D + L I+ N + Y R Y+ +GE
Sbjct: 126 EDYNRALSINSHNYKTYYNRGRAYYLLGE 154
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ +A F++ L+ +P Y +A I RG + AI+D+ A+ +
Sbjct: 144 NRGRAYYLLGEKEAATENFNETLRLNPKYIKAYINRGLCYHQLGDNTQAIADYNTALGID 203
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG R L + AI+D KA++ +PN RG+ +K D AA D
Sbjct: 204 PQNVYAYYNRGCVRYKLKQMQLAIEDFDKAVKLDPNYVKAYLNRGLALYKLGDVTAANRD 263
Query: 506 LSACVKLDKENKSAYTY 522
+ ++ E AY Y
Sbjct: 264 FYHVMCINAE---AYLY 277
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+ G AI+ ++ L DP A RG R ++++ AI DF +A++
Sbjct: 177 INRGLCYHQLGDNTQAIADYNTALGIDPQNVYAYYNRGCVRYKLKQMQLAIEDFDKAVKL 236
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
+P+ +A+ RG A LG+ A +D +
Sbjct: 237 DPNYVKAYLNRGLALYKLGDVTAANRDFYHVM 268
>gi|428319962|ref|YP_007117844.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428243642|gb|AFZ09428.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 346
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 132/248 (53%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +G Y +AI FD+IL+ +P +A RG + ++ + AI+D ++A+ NP
Sbjct: 9 RGLHSAKKGNYEAAIDDFDRILQLNPADAKAYNNRGLVYYYMKDYQKAIADLSQALDINP 68
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG A LGE +AI+DL+ AL +PNS I + RG+V ++ A+ED
Sbjct: 69 NFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANLGNYEEAIEDY 128
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ N Y G A +GE + A E + ++L+ +++A+ + Y L +
Sbjct: 129 NRALSINSNNYKTYYNRGRAYYLLGEKEAATENFNQTLRLNPKYIKAYINRGLCYHQLGD 188
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ +A+ L ID + AY+ RG + + L Q + AI+D + +DP+ ++ R
Sbjct: 189 NTQAMADYNTALAIDPKNVYAYYNRGCVRYKLKQMQLAIEDFDKAVELDPNYVKAYLNRG 248
Query: 627 SCYHAIGE 634
+ +G+
Sbjct: 249 LALYKLGD 256
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 114/220 (51%), Gaps = 2/220 (0%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A + EAAI DF +Q NP+ +A+ RG + + +AI DLS+AL+ P
Sbjct: 9 RGLHSAKKGNYEAAIDDFDRILQLNPADAKAYNNRGLVYYYMKDYQKAIADLSQALDINP 68
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA-YTYLGLALSSIGEYKKAEEA 539
N + RG + A+EDL+ C +K N A Y GL L+++G Y++A E
Sbjct: 69 NFFEAYLNRGNAWRHLGEHEKAIEDLN-CALANKPNSHAIYNNRGLVLANLGNYEEAIED 127
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +A+ ++ N + + + + Y L E A E Q L ++ ++ KAY RGL H LG
Sbjct: 128 YNRALSINSNNYKTYYNRGRAYYLLGEKEAATENFNQTLRLNPKYIKAYINRGLCYHQLG 187
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +A+ D ++ L IDP N+ Y R + + + + A+
Sbjct: 188 DNTQAMADYNTALAIDPKNVYAYYNRGCVRYKLKQMQLAI 227
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ Y AI+ Q L +P + EA + RG A E E AI D A+ +
Sbjct: 42 NRGLVYYYMKDYQKAIADLSQALDINPNFFEAYLNRGNAWRHLGEHEKAIEDLNCALANK 101
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P++ + RG A LG EAI+D ++AL N+ + RG + + AA E+
Sbjct: 102 PNSHAIYNNRGLVLANLGNYEEAIEDYNRALSINSNNYKTYYNRGRAYYLLGEKEAATEN 161
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ + AY GL +G+ +A + A+ +D + A+ + L
Sbjct: 162 FNQTLRLNPKYIKAYINRGLCYHQLGDNTQAMADYNTALAIDPKNVYAYYNRGCVRYKLK 221
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ A+E + + +D + KAY RGL L+ LG A KD + I+
Sbjct: 222 QMQLAIEDFDKAVELDPNYVKAYLNRGLALYKLGDIAAANKDFYHVMCIN 271
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
++RG+ + K ++ AA++D ++L+ + AY GL + +Y+KA +A+
Sbjct: 6 FYKRGLHSAKKGNYEAAIDDFDRILQLNPADAKAYNNRGLVYYYMKDYQKAIADLSQALD 65
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ NF EA+ + ++ L EKA+E L L Y+ RGL+L LG +++AI
Sbjct: 66 INPNFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANLGNYEEAI 125
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+D + L I+ +N + Y R Y+ +GE
Sbjct: 126 EDYNRALSINSNNYKTYYNRGRAYYLLGE 154
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+ G A++ ++ L DP A RG R ++++ AI DF +A++
Sbjct: 177 INRGLCYHQLGDNTQAMADYNTALAIDPKNVYAYYNRGCVRYKLKQMQLAIEDFDKAVEL 236
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
+P+ +A+ RG A LG+ A +D +
Sbjct: 237 DPNYVKAYLNRGLALYKLGDIAAANKDFYHVM 268
>gi|282896150|ref|ZP_06304175.1| hypothetical protein CRD_01036 [Raphidiopsis brookii D9]
gi|281198950|gb|EFA73826.1| hypothetical protein CRD_01036 [Raphidiopsis brookii D9]
Length = 706
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 131/259 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RGI + G AI ++Q +K +P Y A I RG R+ + + AI+D+ +
Sbjct: 416 TDAYYNRGIVRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYNQ 475
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ NP+ A+ RG + LG+ AI D ++A+ + N D + RGI+ + D
Sbjct: 476 AIKLNPNYALAYYNRGIVHSELGDKRGAIADYNQAIRLDHNYTDAYYNRGILRSELGDKQ 535
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D + +KL+ +AY GL S +G+ + A + +AI+L+ N+ A+ +
Sbjct: 536 GAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYNQAIKLNPNYALAYYNRGTV 595
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+ +L + A+ Q + +D ++ AY+ RG+L LG + AI D + + +DP+
Sbjct: 596 HSELGDKRGAIADYNQAIRLDPNYTDAYYNRGILRSELGDKQGAIDDYNQAIKLDPNYAN 655
Query: 621 CLYLRASCYHAIGEYREAV 639
Y R +G + A+
Sbjct: 656 AYYNRGIIRSELGYNQGAI 674
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 137/265 (51%), Gaps = 3/265 (1%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
KS+SI+ + Q N G AI+ ++Q +K DP Y +A I RG R+ + + A
Sbjct: 311 KSQSIAY---FDKAAEQYNGGDKQGAIANYNQAIKLDPDYTDAYINRGLVRSELGDRQGA 367
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+D+ +AI+ +P+ A+ RG + LG+ AI D ++A++ + N D + RGIV
Sbjct: 368 IADYNQAIKLDPNYALAYYNRGIVHSELGDRQGAIADYNQAIKLDSNYTDAYYNRGIVRS 427
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ D A+ D + +KL+ +AY GL S +G+ + A + +AI+L+ N+ A+
Sbjct: 428 ELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYNQAIKLNPNYALAY 487
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + +L + A+ Q + +D ++ AY+ RG+L LG + AI D + + +
Sbjct: 488 YNRGIVHSELGDKRGAIADYNQAIRLDHNYTDAYYNRGILRSELGDKQGAIVDYNQAIKL 547
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
+P+ R +G+ + A+
Sbjct: 548 NPNYTNAYINRGLVRSELGDNQVAI 572
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 133/254 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI G AI+ ++Q +K D Y +A RG R+ + + AI D+ +AI+ N
Sbjct: 387 NRGIVHSELGDRQGAIADYNQAIKLDSNYTDAYYNRGIVRSELGDKQGAIVDYNQAIKLN 446
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R+ LG++ AI D ++A++ PN A + RGIV+ + D A+ D
Sbjct: 447 PNYTNAYINRGLVRSELGDNQVAIADYNQAIKLNPNYALAYYNRGIVHSELGDKRGAIAD 506
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD AY G+ S +G+ + A + +AI+L+ N+ A+ + +L
Sbjct: 507 YNQAIRLDHNYTDAYYNRGILRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELG 566
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+++ A+ Q + ++ ++ AY+ RG + LG + AI D + + +DP+ + Y R
Sbjct: 567 DNQVAIADYNQAIKLNPNYALAYYNRGTVHSELGDKRGAIADYNQAIRLDPNYTDAYYNR 626
Query: 626 ASCYHAIGEYREAV 639
+G+ + A+
Sbjct: 627 GILRSELGDKQGAI 640
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 163/322 (50%), Gaps = 7/322 (2%)
Query: 321 SNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSIS 380
S ++S + +S S+ DS +S+S F D E N +K+ + +++ +
Sbjct: 289 SPSDSMNSGESGTSNENIDDSIKSQSIAYF--DKAAEQYNGG--DKQGAIANYNQAIKLD 344
Query: 381 VDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
D+ ++RG+ + G AI+ ++Q +K DP Y A RG + + + AI+D
Sbjct: 345 PDYTDAYINRGLVRSELGDRQGAIADYNQAIKLDPNYALAYYNRGIVHSELGDRQGAIAD 404
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AI+ + + +A+ RG R+ LG+ AI D ++A++ PN + RG+V +
Sbjct: 405 YNQAIKLDSNYTDAYYNRGIVRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELG 464
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D A+ D + +KL+ AY G+ S +G+ + A + +AI+LD N+ +A+ +
Sbjct: 465 DNQVAIADYNQAIKLNPNYALAYYNRGIVHSELGDKRGAIADYNQAIRLDHNYTDAYYNR 524
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+L + + A+ Q + ++ ++ AY RGL+ LG ++ AI D + + ++P+
Sbjct: 525 GILRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYNQAIKLNPN 584
Query: 618 NIECLYLRASCYHAIGEYREAV 639
Y R + + +G+ R A+
Sbjct: 585 YALAYYNRGTVHSELGDKRGAI 606
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 120/230 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+ + G AI+ ++Q +K +P Y A RG + + AI+D+ +AI+
Sbjct: 454 INRGLVRSELGDNQVAIADYNQAIKLNPNYALAYYNRGIVHSELGDKRGAIADYNQAIRL 513
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + +A+ RG R+ LG+ AI D ++A++ PN + RG+V + D A+
Sbjct: 514 DHNYTDAYYNRGILRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIA 573
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +KL+ AY G S +G+ + A + +AI+LD N+ +A+ + +L
Sbjct: 574 DYNQAIKLNPNYALAYYNRGTVHSELGDKRGAIADYNQAIRLDPNYTDAYYNRGILRSEL 633
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + A++ Q + +D ++ AY+ RG++ LG ++ AI D + I
Sbjct: 634 GDKQGAIDDYNQAIKLDPNYANAYYNRGIIRSELGYNQGAIADFQKAVNI 683
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 113/209 (54%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+++ +AI+ +P +A+ RG R+ LG+ AI D ++A++ +PN A + RGI
Sbjct: 331 QGAIANYNQAIKLDPDYTDAYINRGLVRSELGDRQGAIADYNQAIKLDPNYALAYYNRGI 390
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V+ + D A+ D + +KLD AY G+ S +G+ + A + +AI+L+ N+
Sbjct: 391 VHSELGDRQGAIADYNQAIKLDSNYTDAYYNRGIVRSELGDKQGAIVDYNQAIKLNPNYT 450
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ + +L +++ A+ Q + ++ ++ AY+ RG++ LG + AI D +
Sbjct: 451 NAYINRGLVRSELGDNQVAIADYNQAIKLNPNYALAYYNRGIVHSELGDKRGAIADYNQA 510
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ +D + + Y R +G+ + A++
Sbjct: 511 IRLDHNYTDAYYNRGILRSELGDKQGAIV 539
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 109/209 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI G AI+ ++Q ++ D Y +A RG R+ + + AI D+ +AI+ N
Sbjct: 489 NRGIVHSELGDKRGAIADYNQAIRLDHNYTDAYYNRGILRSELGDKQGAIVDYNQAIKLN 548
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R+ LG++ AI D ++A++ PN A + RG V+ + D A+ D
Sbjct: 549 PNYTNAYINRGLVRSELGDNQVAIADYNQAIKLNPNYALAYYNRGTVHSELGDKRGAIAD 608
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD AY G+ S +G+ + A + + +AI+LD N+ A+ + +L
Sbjct: 609 YNQAIRLDPNYTDAYYNRGILRSELGDKQGAIDDYNQAIKLDPNYANAYYNRGIIRSELG 668
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLL 594
++ A+ Q+ + I ++ K + R L
Sbjct: 669 YNQGAIADFQKAVNIYQQQGKENNYRDAL 697
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RGI + G AI ++Q +K +P Y A I RG R+ + + AI+D+ +
Sbjct: 518 TDAYYNRGILRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYNQ 577
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ NP+ A+ RG + LG+ AI D ++A+ +PN D + RGI+ + D
Sbjct: 578 AIKLNPNYALAYYNRGTVHSELGDKRGAIADYNQAIRLDPNYTDAYYNRGILRSELGDKQ 637
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
A++D + +KLD +AY G+ S +G + A KA+ +
Sbjct: 638 GAIDDYNQAIKLDPNYANAYYNRGIIRSELGYNQGAIADFQKAVNI 683
>gi|427707826|ref|YP_007050203.1| hypothetical protein Nos7107_2446 [Nostoc sp. PCC 7107]
gi|427360331|gb|AFY43053.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 708
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 133/262 (50%), Gaps = 7/262 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G AI+ ++Q +K +P Y A RG R + + AI+D+T+A++ N
Sbjct: 390 NRGNTRAILGDKQGAITDYNQAIKINPNYVFAYNNRGNTRYDLGDYQGAIADYTQAVKIN 449
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG +R LG+ A+ D + AL+ PN+A+ + RG KD AA+ D
Sbjct: 450 PNHSSAYNGRGNSRYYLGDKQGALNDYTLALKANPNNAEAYYNRGNARSDLKDSPAAIAD 509
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ +AY G A +GE +KA + +AI+ D N EA+ + Y DL
Sbjct: 510 YNEAIKLNPNYSAAYNGRGNAFYYLGEKQKALADYSQAIKSDANNSEAYYNRGNVYFDLG 569
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N + A+ Q + I+ ++ AY+ RG + L + A+ D + L + P+ Y R
Sbjct: 570 NKKGAISDYTQAIKINPNYAYAYNNRGNTKYDLNDLQGALADYNQALKLLPNYAFAYYNR 629
Query: 626 ASCYH-------AIGEYREAVI 640
A+ Y AI +Y A+I
Sbjct: 630 ANVYKNLGDLEGAIADYNRAII 651
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 145/301 (48%), Gaps = 12/301 (3%)
Query: 339 SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYA 398
+D +R L K LK+ + K N ++ ++ +I DF RG
Sbjct: 287 NDRGNARYYLGDKQGALKDYNQAIKINPEYAFAYYNRG-NILYDFDDKRG---------- 335
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
A++ ++Q LK +P Y A RG + + + A++D+ AI+ +P EA+ RG
Sbjct: 336 -ALADYNQALKLNPNYSSAYNNRGNSHYALGDKQRALADYNLAIKVDPGNSEAYYNRGNT 394
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
RA LG+ AI D ++A++ PN + RG + D+ A+ D + VK++ + S
Sbjct: 395 RAILGDKQGAITDYNQAIKINPNYVFAYNNRGNTRYDLGDYQGAIADYTQAVKINPNHSS 454
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
AY G + +G+ + A + A++ + N EA+ + DL +S A+ + +
Sbjct: 455 AYNGRGNSRYYLGDKQGALNDYTLALKANPNNAEAYYNRGNARSDLKDSPAAIADYNEAI 514
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
++ +S AY+ RG + LG+ +KA+ D S + D +N E Y R + Y +G + A
Sbjct: 515 KLNPNYSAAYNGRGNAFYYLGEKQKALADYSQAIKSDANNSEAYYNRGNVYFDLGNKKGA 574
Query: 639 V 639
+
Sbjct: 575 I 575
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 8/278 (2%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
V++ + + + DF + G + +G Y AI ++Q + +P Y A RG AR +
Sbjct: 238 AVSQPTPTAPKADDFYIQGG-DKYKKGDYKGAIEAYNQAISINPKYSYAYNDRGNARYYL 296
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ D+ +AI+ NP A+ RG + A+ D ++AL+ PN + +
Sbjct: 297 GDKQGALKDYNQAIKINPEYAFAYYNRGNILYDFDDKRGALADYNQALKLNPNYSSAYNN 356
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG ++ D A+ D + +K+D N AY G + +G+ + A + +AI+++
Sbjct: 357 RGNSHYALGDKQRALADYNLAIKVDPGNSEAYYNRGNTRAILGDKQGAITDYNQAIKINP 416
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N++ A+ + DL + + A+ Q + I+ S AY+ RG + LG + A+ D
Sbjct: 417 NYVFAYNNRGNTRYDLGDYQGAIADYTQAVKINPNHSSAYNGRGNSRYYLGDKQGALNDY 476
Query: 609 SSGLGIDPSNIECLYLRASCYH-------AIGEYREAV 639
+ L +P+N E Y R + AI +Y EA+
Sbjct: 477 TLALKANPNNAEAYYNRGNARSDLKDSPAAIADYNEAI 514
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 133/261 (50%), Gaps = 4/261 (1%)
Query: 366 KKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
K+ +T +++ I+ ++ + RG + + G Y AI+ + Q +K +P + A GRG
Sbjct: 401 KQGAITDYNQAIKINPNYVFAYNNRGNTRYDLGDYQGAIADYTQAVKINPNHSSAYNGRG 460
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
+R + + + A++D+T A+++NP+ EA+ RG AR+ L +S AI D ++A++ PN
Sbjct: 461 NSRYYLGDKQGALNDYTLALKANPNNAEAYYNRGNARSDLKDSPAAIADYNEAIKLNPNY 520
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
+ + RG + + A+ D S +K D N AY G +G K A + +
Sbjct: 521 SAAYNGRGNAFYYLGEKQKALADYSQAIKSDANNSEAYYNRGNVYFDLGNKKGAISDYTQ 580
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI+++ N+ A+ + DL + + AL Q L + ++ AY+ R + LG +
Sbjct: 581 AIKINPNYAYAYNNRGNTKYDLNDLQGALADYNQALKLLPNYAFAYYNRANVYKNLGDLE 640
Query: 603 KAIKDLSSGLGIDPSNIECLY 623
AI D + + I+ SN Y
Sbjct: 641 GAIADYNRAI-INNSNYAQAY 660
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 116/223 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG ++ G A++ + LK +P EA RG AR+ ++ AAI+D+ EAI+ N
Sbjct: 458 GRGNSRYYLGDKQGALNDYTLALKANPNNAEAYYNRGNARSDLKDSPAAIADYNEAIKLN 517
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LGE +A+ D S+A++ + N+++ + RG V F + A+ D
Sbjct: 518 PNYSAAYNGRGNAFYYLGEKQKALADYSQAIKSDANNSEAYYNRGNVYFDLGNKKGAISD 577
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ AY G + + + A + +A++L N+ A+ + Y++L
Sbjct: 578 YTQAIKINPNYAYAYNNRGNTKYDLNDLQGALADYNQALKLLPNYAFAYYNRANVYKNLG 637
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ E A+ + + + +++AY RGL + LG+ + I DL
Sbjct: 638 DLEGAIADYNRAIINNSNYAQAYQNRGLARYDLGEQQAGISDL 680
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G AIS + Q +K +P Y A RG + +L+ A++D+ +A++
Sbjct: 560 NRGNVYFDLGNKKGAISDYTQAIKINPNYAYAYNNRGNTKYDLNDLQGALADYNQALKLL 619
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R LG+ AI D ++A+ N A RG+ + + A + D
Sbjct: 620 PNYAFAYYNRANVYKNLGDLEGAIADYNRAIINNSNYAQAYQNRGLARYDLGEQQAGISD 679
Query: 506 LSACVKLDKENKSAYTY 522
L L KE +A Y
Sbjct: 680 LEIAANLYKEQGNAAAY 696
>gi|407034776|gb|EKE37387.1| TPR repeat protein [Entamoeba nuttalli P19]
Length = 931
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 126/233 (54%), Gaps = 1/233 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN GK A++ + L++ P I RGTA A + + A+ DF+
Sbjct: 221 IDQELAIGYLLVNNGKLQEAVNYLTKFLQKHPNVCGGYIARGTAYAMIGQYQMAVEDFSS 280
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDF 499
A+ +P+ +A KRRGQ ALG+ EA+ D++ A+++ D +RGI +++
Sbjct: 281 AVIIDPTNADAHKRRGQTLIALGKIDEALVDMNDAVKYGGEKDVDCYKQRGICYQMIRNY 340
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A +D CVK + + A+ + GL +++G +K+A EA +A+ + ++F++ + +L Q
Sbjct: 341 ELARDDFGVCVKRSQGDYIAWNHYGLNNTALGLFKEAAEAFGRAVSIKQDFVDGYVNLFQ 400
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+D +KA E + + + A++LRG+L +G H KA K+ + +
Sbjct: 401 LLKDAGKPKKAEEVFKIIFRLAPNHCFAHYLRGVLFQQIGHHIKATKEFAIAI 453
>gi|282899251|ref|ZP_06307223.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281195859|gb|EFA70784.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 595
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI G AI+ F Q++K +P A RG +R+ + + AISDFT+ I+ N
Sbjct: 327 NRGILHHELGNKQGAINDFTQVIKLNPGNIRAYYNRGASRSDLGDKQGAISDFTKVIEIN 386
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG AR G+ AI D ++++ P + RGI + D A+ D
Sbjct: 387 PNFAEAYNNRGLARRDSGDKQGAITDFTQSINLNPRDPIAYNNRGIARDELGDKPGAISD 446
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ V ++ AY GLA ++G+ A +AI++ NF +A+ + DL
Sbjct: 447 FTQAVTINPNFAQAYNNRGLARHNLGDKPGAITDFTQAIKIIPNFAQAYNNRGLSRSDLG 506
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ A+ Q + I F++AY+ RGL LH LG + A+ D + + I+P+
Sbjct: 507 DKPGAISDFTQAIKIIPNFAQAYNNRGLALHSLGDKQGAVSDFTQAIKINPN 558
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 119/238 (50%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ K ++ +RG ++ + G AIS F ++++ +P + EA RG AR +
Sbjct: 346 TQVIKLNPGNIRAYYNRGASRSDLGDKQGAISDFTKVIEINPNFAEAYNNRGLARRDSGD 405
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+DFT++I NP A+ RG AR LG+ AI D ++A+ PN A + RG
Sbjct: 406 KQGAITDFTQSINLNPRDPIAYNNRGIARDELGDKPGAISDFTQAVTINPNFAQAYNNRG 465
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ D A+ D + +K+ AY GL+ S +G+ A +AI++ NF
Sbjct: 466 LARHNLGDKPGAITDFTQAIKIIPNFAQAYNNRGLSRSDLGDKPGAISDFTQAIKIIPNF 525
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+A+ + L + + A+ Q + I+ F++AY+ RGL LG + AI D
Sbjct: 526 AQAYNNRGLALHSLGDKQGAVSDFTQAIKINPNFAQAYNNRGLSRSDLGDKEGAISDF 583
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 114/245 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G AIS F Q L P A RG + AI+DFT+ I+ NP A+
Sbjct: 302 GDKQGAISDFTQFLTFHPYNALAYYNRGILHHELGNKQGAINDFTQVIKLNPGNIRAYYN 361
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG +R+ LG+ AI D +K +E PN A+ + RG+ D A+ D + + L+
Sbjct: 362 RGASRSDLGDKQGAISDFTKVIEINPNFAEAYNNRGLARRDSGDKQGAITDFTQSINLNP 421
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY G+A +G+ A +A+ ++ NF +A+ + +L + A+
Sbjct: 422 RDPIAYNNRGIARDELGDKPGAISDFTQAVTINPNFAQAYNNRGLARHNLGDKPGAITDF 481
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q + I F++AY+ RGL LG AI D + + I P+ + R H++G+
Sbjct: 482 TQAIKIIPNFAQAYNNRGLSRSDLGDKPGAISDFTQAIKIIPNFAQAYNNRGLALHSLGD 541
Query: 635 YREAV 639
+ AV
Sbjct: 542 KQGAV 546
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 111/227 (48%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
+Y A RG R + + AI+DFT AI NP+ +++ R R LG+ AI D
Sbjct: 252 VYAIAYNDRGVNRYQSGDKQGAINDFTAAINVNPNFAKSYYNRAAIRNELGDKQGAISDF 311
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++ L F P +A + RGI++ + + A+ D + +KL+ N AY G + S +G+
Sbjct: 312 TQFLTFHPYNALAYYNRGILHHELGNKQGAINDFTQVIKLNPGNIRAYYNRGASRSDLGD 371
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ A K I+++ NF EA+ + +D + + A+ Q + ++ R AY+ RG
Sbjct: 372 KQGAISDFTKVIEINPNFAEAYNNRGLARRDSGDKQGAITDFTQSINLNPRDPIAYNNRG 431
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ LG AI D + + I+P+ + R H +G+ A+
Sbjct: 432 IARDELGDKPGAISDFTQAVTINPNFAQAYNNRGLARHNLGDKPGAI 478
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 366 KKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
K ++ +++ +I+ +F + RG+A+ N G AI+ F Q +K P + +A RG
Sbjct: 440 KPGAISDFTQAVTINPNFAQAYNNRGLARHNLGDKPGAITDFTQAIKIIPNFAQAYNNRG 499
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
+R+ + AISDFT+AI+ P+ +A+ RG A +LG+ A+ D ++A++ PN
Sbjct: 500 LSRSDLGDKPGAISDFTQAIKIIPNFAQAYNNRGLALHSLGDKQGAVSDFTQAIKINPNF 559
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A + RG+ D A+ D L N
Sbjct: 560 AQAYNNRGLSRSDLGDKEGAISDFKNAAVLFNRN 593
>gi|338210531|ref|YP_004654580.1| hypothetical protein [Runella slithyformis DSM 19594]
gi|336304346|gb|AEI47448.1| Tetratricopeptide TPR_1 repeat-containing protein [Runella
slithyformis DSM 19594]
Length = 446
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 130/240 (54%), Gaps = 2/240 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A+ N AI FD+ ++ +P Y +A + RG ++A Q + +AI DF+ +I+ N
Sbjct: 66 NRAMAKANLKDNRGAILDFDRSIELNPKYSDAYLYRGVSKAKQDDYRSAIQDFSRSIELN 125
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + +RG RA L A+QDL++ +E EPN+A L+ RG V K +DF +A+ D
Sbjct: 126 PDDPQGYLQRGINRARLENYRGALQDLNRTVELEPNNAGALYTRGNVKLKLEDFTSALAD 185
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L ++ SAY G + + ++ A + KAI+L + E++ + L
Sbjct: 186 FSRVIDLTPKSSSAYAGRGFTRTKLNDFNGAVADYSKAIELKADDSESFYNRGFARSKLE 245
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID--PSNIECLY 623
E+A+ Q + +D + +AY+ RG LG ++AI DL+ + I+ P++ + Y
Sbjct: 246 KYEEAIADFDQAIILDPQNHRAYYGRGFCKSKLGSQREAISDLNKAVDINNTPTDTKVTY 305
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 128/286 (44%), Gaps = 36/286 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RGI + Y A+ ++ ++ +P AL RG + + +A++DF+ I
Sbjct: 133 LQRGINRARLENYRGALQDLNRTVELEPNNAGALYTRGNVKLKLEDFTSALADFSRVIDL 192
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + A+ RG R L + A+ D SKA+E + + ++ + RG K + + A+
Sbjct: 193 TPKSSSAYAGRGFTRTKLNDFNGAVADYSKAIELKADDSESFYNRGFARSKLEKYEEAIA 252
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---------------RN 549
D + LD +N AY G S +G ++A KA+ ++ R+
Sbjct: 253 DFDQAIILDPQNHRAYYGRGFCKSKLGSQREAISDLNKAVDINNTPTDTKVTYAGRITRS 312
Query: 550 FLEAWGHLTQ----------------FYQDLANSEK-----ALECLQQVLYIDKRFSKAY 588
L+ ++ Q F + + +++ A+ L + + ++ +S+AY
Sbjct: 313 VLDDLRNVVQERNKIYELSSERSEALFARGVGKNKQGDAKGAIIDLNKAIELNPTYSEAY 372
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
RG++ +G + A++D SS + ++P E Y+R H++G+
Sbjct: 373 FTRGMVKSAIGDQRGAVQDCSSAVKLNPKYAEAYYVRGLIKHSLGD 418
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 2/225 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + + A++ + + ++ E+ RG AR+ + E AI+DF +AI +P
Sbjct: 203 RGFTRTKLNDFNGAVADYSKAIELKADDSESFYNRGFARSKLEKYEEAIADFDQAIILDP 262
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFE--PNSADILHERGIVNFKFKDFNAAVE 504
A+ RG ++ LG EAI DL+KA++ P + + I D V+
Sbjct: 263 QNHRAYYGRGFCKSKLGSQREAISDLNKAVDINNTPTDTKVTYAGRITRSVLDDLRNVVQ 322
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + +L E A G+ + G+ K A KAI+L+ + EA+ +
Sbjct: 323 ERNKIYELSSERSEALFARGVGKNKQGDAKGAIIDLNKAIELNPTYSEAYFTRGMVKSAI 382
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A++ + ++ ++++AY++RGL+ H LG DLS
Sbjct: 383 GDQRGAVQDCSSAVKLNPKYAEAYYVRGLIKHSLGDENSGCLDLS 427
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EAL RG + Q + + AI D +AI+ NP+ EA+ RG ++A+G+ A+QD S A
Sbjct: 336 EALFARGVGKNKQGDAKGAIIDLNKAIELNPTYSEAYFTRGMVKSAIGDQRGAVQDCSSA 395
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
++ P A+ + RG++ D N S C+ L K + YT
Sbjct: 396 VKLNPKYAEAYYVRGLIKHSLGDEN------SGCLDLSKAGELGYT 435
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++SKAI + ++ + + NR F S+LE ++ I D D+A+ LDP +AY
Sbjct: 216 AVADYSKAIEL------KADDSESFYNRGFARSKLEKYEEAIADFDQAIILDPQNHRAYY 269
Query: 108 LKGCAFSALGRKEEALSVWEK 128
+G S LG + EA+S K
Sbjct: 270 GRGFCKSKLGSQREAISDLNK 290
>gi|374812493|ref|ZP_09716230.1| hypothetical protein TpriZ_01350 [Treponema primitia ZAS-1]
Length = 343
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 138/266 (51%), Gaps = 4/266 (1%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
++S + ++RGI ++ Y SAI ++Q ++ +P PEA RG+A A + E A++D
Sbjct: 26 NLSYNEYINRGILYADQKNYDSAIGYYNQAIRLNPNLPEAYNNRGSAYAVKGEQVWALAD 85
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
FTEAI+ P+ A+ RG G+ A+ D S+A+ +P A RG +
Sbjct: 86 FTEAIRLKPNYTFAYNNRGLLHIERGDYERALSDFSQAILIDPGYAKAYRNRGDAWVQKG 145
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
++ A+ D ++L AY G A ++ GEY KA + +AI+++ N+ EA+ +
Sbjct: 146 EYERAISDYDQAIRLSPSYAMAYGSRGNAYANRGEYDKAAADYNQAIRINPNYAEAYINR 205
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRF----SKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
Y D+ + + LE +VL I+ + +K+Y RGL + +G++++A+ D + +
Sbjct: 206 GNIYYDIGYTNRGLEDYTRVLDINLSYGPDLAKSYANRGLAYNNMGEYRRALTDYNEAIK 265
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
+ P+ R Y +GEY A+
Sbjct: 266 LRPNLAVVFRHRGVSYTNLGEYDLAI 291
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 4/235 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G Y A+S F Q + DP Y +A RG A + E E AISD+ +AI+ +
Sbjct: 102 NRGLLHIERGDYERALSDFSQAILIDPGYAKAYRNRGDAWVQKGEYERAISDYDQAIRLS 161
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A+ RG A A GE +A D ++A+ PN A+ RG + + N +ED
Sbjct: 162 PSYAMAYGSRGNAYANRGEYDKAAADYNQAIRINPNYAEAYINRGNIYYDIGYTNRGLED 221
Query: 506 LSACVKLD----KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
+ + ++ + +Y GLA +++GEY++A + +AI+L N + H Y
Sbjct: 222 YTRVLDINLSYGPDLAKSYANRGLAYNNMGEYRRALTDYNEAIKLRPNLAVVFRHRGVSY 281
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+L + A+E + ++ ++ AY RG G + +A D + I+P
Sbjct: 282 TNLGEYDLAIEDFTHAIILNPNYALAYINRGNAYSQKGLYDQARIDYHQAVRINP 336
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A V +G+Y AIS +DQ ++ P Y A RG A A + E + A +D+ +AI+ N
Sbjct: 136 NRGDAWVQKGEYERAISDYDQAIRLSPSYAMAYGSRGNAYANRGEYDKAAADYNQAIRIN 195
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALE----FEPNSADILHERGIVNFKFKDFNA 501
P+ EA+ RG +G + ++D ++ L+ + P+ A RG+ ++
Sbjct: 196 PNYAEAYINRGNIYYDIGYTNRGLEDYTRVLDINLSYGPDLAKSYANRGLAYNNMGEYRR 255
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + +KL + + G++ +++GEY A E AI L+ N+ A+ + Y
Sbjct: 256 ALTDYNEAIKLRPNLAVVFRHRGVSYTNLGEYDLAIEDFTHAIILNPNYALAYINRGNAY 315
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYH 589
++A Q + I+ ++ Y+
Sbjct: 316 SQKGLYDQARIDYHQAVRINPKYGAIYY 343
>gi|449278069|gb|EMC86036.1| Tetratricopeptide repeat protein 13, partial [Columba livia]
Length = 773
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 135/260 (51%), Gaps = 6/260 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFT 439
L+ + G Y AI F +L+E+P A+ GRG A + + E A+ + +
Sbjct: 57 LAIAYVLIGNGLYDEAIRHFSTMLQEEPELVSAIYGRGIAYGKKGLHDMKNAELALFELS 116
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I P E +++R + + LG EA+ DLSKA++ +P SA + RG + F +D+
Sbjct: 117 RVISLEPDHPEVFEQRAEILSPLGRISEALSDLSKAIQLQP-SARLYRHRGTLYFISEDY 175
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A ED ++L+K A Y GL G K+A E+ +A++ +F++A+ L Q
Sbjct: 176 ATAHEDFQHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQ 235
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
Y++L N + A E Q+ L +++ + L+G++L+ G +A+K+ L ++P N
Sbjct: 236 AYRELGNFDAATENFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNFKRCLQLEPYNE 295
Query: 620 ECLYLRASCYHAIGEYREAV 639
C Y++ + A+G++ E +
Sbjct: 296 VCQYMKGLSHVAMGQFYEGI 315
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
++ +SK+ + RL RG YA+A F L+ + P A++ +G
Sbjct: 145 ALSDLSKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQHSLELNKNQPIAMLYKGLTFF 204
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A ++ KAL N L
Sbjct: 205 HRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFDAATENFQKALLLNQNHVQTL 264
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+G++ + + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 265 QLKGMMLYHHGSLDEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 322
>gi|218437459|ref|YP_002375788.1| hypothetical protein PCC7424_0454 [Cyanothece sp. PCC 7424]
gi|218170187|gb|ACK68920.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 357
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 140/273 (51%), Gaps = 3/273 (1%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPM 413
++ SN A + V ++ +K+ +F ++G++ + + KY A+ F+Q L +P
Sbjct: 9 VMASPSNHANLRPELLV--VANNKASETEF-YNQGVSLLKQKKYQEALKQFNQALNINPN 65
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y +A RG ++ + A +D+ A+Q + EA+ RG R ALG + A+ D +
Sbjct: 66 YTQAYTKRGLTYYHLKQYQEAFNDYNRAVQLDAKFPEAYTYRGLLRHALGNDIGALTDYN 125
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+A+E + N A+ + RG+ + D A++D + + L+ + AY G+A S G+Y
Sbjct: 126 RAIEIKSNYAEAYNYRGVSHLALSDHQNAIKDYTQAIALNPKYAEAYNNRGVAHSIAGDY 185
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
KA E + KAIQLD N+ +A+ + L A+ L +D + S Y+ RG+
Sbjct: 186 AKAMEDYSKAIQLDSNYTQAYKNRGITKAQLGEYLAAIIDYNHALELDSQDSSIYYNRGI 245
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ L +++KAI D S + DP++ + RA
Sbjct: 246 AYYQLKEYQKAIADYSEVIKRDPNSPNTYFSRA 278
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 112/222 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + G A++ +++ ++ Y EA RG + + + AI D+T+AI NP
Sbjct: 107 RGLLRHALGNDIGALTDYNRAIEIKSNYAEAYNYRGVSHLALSDHQNAIKDYTQAIALNP 166
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA+ RG A + G+ +A++D SKA++ + N RGI + ++ AA+ D
Sbjct: 167 KYAEAYNNRGVAHSIAGDYAKAMEDYSKAIQLDSNYTQAYKNRGITKAQLGEYLAAIIDY 226
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD ++ S Y G+A + EY+KA + + I+ D N + Q L +
Sbjct: 227 NHALELDSQDSSIYYNRGIAYYQLKEYQKAIADYSEVIKRDPNSPNTYFSRAVARQQLKD 286
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++ AL+ + ++ AY RGLL + +G K ++DL
Sbjct: 287 AQGALDDYNLAITKKTDYADAYFNRGLLFYQVGNQSKFVEDL 328
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 90/174 (51%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EA++ ++AL PN +RG+ + K + A D + V+LD + AYTY GL
Sbjct: 51 EALKQFNQALNINPNYTQAYTKRGLTYYHLKQYQEAFNDYNRAVQLDAKFPEAYTYRGLL 110
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
++G A + +AI++ N+ EA+ + + L++ + A++ Q + ++ ++++
Sbjct: 111 RHALGNDIGALTDYNRAIEIKSNYAEAYNYRGVSHLALSDHQNAIKDYTQAIALNPKYAE 170
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
AY+ RG+ G + KA++D S + +D + + R +GEY A+I
Sbjct: 171 AYNNRGVAHSIAGDYAKAMEDYSKAIQLDSNYTQAYKNRGITKAQLGEYLAAII 224
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G YA A+ + + ++ D Y +A RG +A E AAI D+ A++ +
Sbjct: 174 NRGVAHSIAGDYAKAMEDYSKAIQLDSNYTQAYKNRGITKAQLGEYLAAIIDYNHALELD 233
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RG A L E +AI D S+ ++ +PNS + R + + KD A++D
Sbjct: 234 SQDSSIYYNRGIAYYQLKEYQKAIADYSEVIKRDPNSPNTYFSRAVARQQLKDAQGALDD 293
Query: 506 LSACVKLDKENKSAYTYLGLALSSIG 531
+ + + AY GL +G
Sbjct: 294 YNLAITKKTDYADAYFNRGLLFYQVG 319
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ +G+ K K + A++ + + ++ AYT GL + +Y++A + +A+Q
Sbjct: 36 FYNQGVSLLKQKKYQEALKQFNQALNINPNYTQAYTKRGLTYYHLKQYQEAFNDYNRAVQ 95
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
LD F EA+ + L N AL + + I +++AY+ RG+ L H+ AI
Sbjct: 96 LDAKFPEAYTYRGLLRHALGNDIGALTDYNRAIEIKSNYAEAYNYRGVSHLALSDHQNAI 155
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
KD + + ++P E R + G+Y +A+
Sbjct: 156 KDYTQAIALNPKYAEAYNNRGVAHSIAGDYAKAM 189
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I +D + RGI + G+Y +AI ++ L+ D RG A +E
Sbjct: 193 SKAIQLDSNYTQAYKNRGITKAQLGEYLAAIIDYNHALELDSQDSSIYYNRGIAYYQLKE 252
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D++E I+ +P++ + R AR L ++ A+ D + A+ + + AD RG
Sbjct: 253 YQKAIADYSEVIKRDPNSPNTYFSRAVARQQLKDAQGALDDYNLAITKKTDYADAYFNRG 312
Query: 491 IVNFKFKDFNAAVEDLSACVKL 512
++ ++ + + VEDL L
Sbjct: 313 LLFYQVGNQSKFVEDLEKAASL 334
>gi|354569225|ref|ZP_08988381.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353538880|gb|EHC08390.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 666
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 127/235 (54%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+ Y +AI+ +++ LK +P +A + RG AR ++++ A++D+ +A
Sbjct: 310 DAYYNRGLVYYELKNYQAAIADYNESLKINPNAEDAYLNRGLARYELKDIQGAMADYNQA 369
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ NP+ + + RG AR+A G+ A+ D ++A++F PN + RG+ ++ D
Sbjct: 370 LKINPNYDKGYYNRGLARSASGDKKGALADYNQAIKFNPNYDKAYYNRGLTRYELGDKQG 429
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
++D + +K++ AY G+ALS G+ +KA + + I+L ++ +A+ +
Sbjct: 430 EIDDYNQAIKINPNYALAYYNRGIALSEKGDTQKALDDFNQTIKLRPDYTDAYIYRGLTL 489
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
DL N + A Q + + + KAY+ RGL + LG + AI D + L I+P
Sbjct: 490 YDLGNKQGAFNDFNQAIKLSPNYDKAYYNRGLTRYELGDKQGAITDYNQALKINP 544
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 134/260 (51%), Gaps = 4/260 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG+A+ A++ ++Q LK +P Y + RG AR+ + + A++D+ +A
Sbjct: 344 DAYLNRGLARYELKDIQGAMADYNQALKINPNYDKGYYNRGLARSASGDKKGALADYNQA 403
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP+ +A+ RG R LG+ I D ++A++ PN A + RGI + D
Sbjct: 404 IKFNPNYDKAYYNRGLTRYELGDKQGEIDDYNQAIKINPNYALAYYNRGIALSEKGDTQK 463
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQ 559
A++D + +KL + AY Y GL L +G + A +AI+L N+ +A+ + LT+
Sbjct: 464 ALDDFNQTIKLRPDYTDAYIYRGLTLYDLGNKQGAFNDFNQAIKLSPNYDKAYYNRGLTR 523
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ +L + + A+ Q L I+ +++ AY RGL LG + AI D + L P
Sbjct: 524 Y--ELGDKQGAITDYNQALKINPKYANAYLNRGLTRADLGDRQGAIADYNQALKYKPDYD 581
Query: 620 ECLYLRASCYHAIGEYREAV 639
+ Y R Y + ++A+
Sbjct: 582 KAYYNRGIAYFDLKNLQQAL 601
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 123/239 (51%), Gaps = 4/239 (1%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ + Q ++ +P Y A RG AR+ + + AI+D+T+ ++ NP +A+ RG
Sbjct: 257 YQGAIANYTQAIRLNPRYANAYYNRGIARSDIGDKQGAIADYTQTVKINPRHDDAYYNRG 316
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
L AI D +++L+ PN+ D RG+ ++ KD A+ D + +K++
Sbjct: 317 LVYYELKNYQAAIADYNESLKINPNAEDAYLNRGLARYELKDIQGAMADYNQALKINPNY 376
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECL 574
Y GLA S+ G+ K A + +AI+ + N+ +A+ + LT++ +L + + ++
Sbjct: 377 DKGYYNRGLARSASGDKKGALADYNQAIKFNPNYDKAYYNRGLTRY--ELGDKQGEIDDY 434
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
Q + I+ ++ AY+ RG+ L G +KA+ D + + + P + R + +G
Sbjct: 435 NQAIKINPNYALAYYNRGIALSEKGDTQKALDDFNQTIKLRPDYTDAYIYRGLTLYDLG 493
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 111/223 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G I ++Q +K +P Y A RG A + + + + A+ DF + I+
Sbjct: 416 NRGLTRYELGDKQGEIDDYNQAIKINPNYALAYYNRGIALSEKGDTQKALDDFNQTIKLR 475
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG LG A D ++A++ PN + RG+ ++ D A+ D
Sbjct: 476 PDYTDAYIYRGLTLYDLGNKQGAFNDFNQAIKLSPNYDKAYYNRGLTRYELGDKQGAITD 535
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + +AY GL + +G+ + A + +A++ ++ +A+ + Y DL
Sbjct: 536 YNQALKINPKYANAYLNRGLTRADLGDRQGAIADYNQALKYKPDYDKAYYNRGIAYFDLK 595
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N ++AL Q + I+ +++ AY+ R L LG K A+ D
Sbjct: 596 NLQQALADFNQAIKINSKYANAYYNRALTRRDLGDKKGALADF 638
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 113/216 (52%), Gaps = 10/216 (4%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + AI+++T+AI+ NP A+ RG AR+ +G+ AI D ++ ++ P D +
Sbjct: 255 KDYQGAIANYTQAIRLNPRYANAYYNRGIARSDIGDKQGAIADYTQTVKINPRHDDAYYN 314
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG+V ++ K++ AA+ D + +K++ + AY GLA + + + A + +A++++
Sbjct: 315 RGLVYYELKNYQAAIADYNESLKINPNAEDAYLNRGLARYELKDIQGAMADYNQALKINP 374
Query: 549 NFLEAWGHLTQFYQDLANS-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
N+ + + + + LA S + AL Q + + + KAY+ RGL + LG +
Sbjct: 375 NYDKGY-----YNRGLARSASGDKKGALADYNQAIKFNPNYDKAYYNRGLTRYELGDKQG 429
Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I D + + I+P+ Y R G+ ++A+
Sbjct: 430 EIDDYNQAIKINPNYALAYYNRGIALSEKGDTQKAL 465
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 121/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G A++ ++Q +K +P Y +A RG R + + I D+ +AI+ N
Sbjct: 382 NRGLARSASGDKKGALADYNQAIKFNPNYDKAYYNRGLTRYELGDKQGEIDDYNQAIKIN 441
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A + G++ +A+ D ++ ++ P+ D RG+ + + A D
Sbjct: 442 PNYALAYYNRGIALSEKGDTQKALDDFNQTIKLRPDYTDAYIYRGLTLYDLGNKQGAFND 501
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL AY GL +G+ + A + +A++++ + A+ + DL
Sbjct: 502 FNQAIKLSPNYDKAYYNRGLTRYELGDKQGAITDYNQALKINPKYANAYLNRGLTRADLG 561
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+ Q L + KAY+ RG+ L ++A+ D + + I+ Y R
Sbjct: 562 DRQGAIADYNQALKYKPDYDKAYYNRGIAYFDLKNLQQALADFNQAIKINSKYANAYYNR 621
Query: 626 ASCYHAIGEYREAV 639
A +G+ + A+
Sbjct: 622 ALTRRDLGDKKGAL 635
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 5/177 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D + RG+ + G A + F+Q +K P Y +A RG R + + AI+D+ +
Sbjct: 479 TDAYIYRGLTLYDLGNKQGAFNDFNQAIKLSPNYDKAYYNRGLTRYELGDKQGAITDYNQ 538
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A++ NP A+ RG RA LG+ AI D ++AL+++P+ + RGI F K+
Sbjct: 539 ALKINPKYANAYLNRGLTRADLGDRQGAIADYNQALKYKPDYDKAYYNRGIAYFDLKNLQ 598
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA-----EEAHLKAIQLDRNFLE 552
A+ D + +K++ + +AY L +G+ K A + A L Q + N+ E
Sbjct: 599 QALADFNQAIKINSKYANAYYNRALTRRDLGDKKGALADFKQAAELYRQQNNNNYYE 655
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 72/146 (49%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ KD+ A+ + + ++L+ +AY G+A S IG+ + A + + ++++ +A
Sbjct: 252 YRNKDYQGAIANYTQAIRLNPRYANAYYNRGIARSDIGDKQGAIADYTQTVKINPRHDDA 311
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ + Y +L N + A+ + L I+ AY RGL + L + A+ D + L
Sbjct: 312 YYNRGLVYYELKNYQAAIADYNESLKINPNAEDAYLNRGLARYELKDIQGAMADYNQALK 371
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
I+P+ + Y R A G+ + A+
Sbjct: 372 INPNYDKGYYNRGLARSASGDKKGAL 397
>gi|327262216|ref|XP_003215921.1| PREDICTED: tetratricopeptide repeat protein 13-like [Anolis
carolinensis]
Length = 823
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 132/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E P A+ GRG A + + E A+ + + I P
Sbjct: 130 IGSGLYDEAIQQFSTMLQEQPELVSAIYGRGIAYGRKGLHDIKNAELALFELSRVISLAP 189
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG VEA+ DLSKA++ +P SA + RG + F +D+ A ED
Sbjct: 190 DHPEVFEQRAEILSPLGRIVEALADLSKAIQLKP-SARLYRHRGTLYFISEDYATAQEDF 248
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L++ A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 249 QNSLELNRNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFVDAYKSLGQAYRELGN 308
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A E Q+ L +++ + L G++L+ G +A+K+ L ++P N C Y++
Sbjct: 309 FEAATENFQKALMLNQNHVQTIQLGGMMLYHHGSPDEALKNFKRCLQLEPYNEVCQYMKG 368
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 369 LSHVAMGQFYEGI 381
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 373 ISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+SK+ + RL RG YA+A F L+ + P A++ +G +
Sbjct: 215 LSKAIQLKPSARLYRHRGTLYFISEDYATAQEDFQNSLELNRNQPIAMLYKGLTFFHRGL 274
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L+ AI F EA++ +A+K GQA LG A ++ KAL N + G
Sbjct: 275 LKEAIESFKEALKQKADFVDAYKSLGQAYRELGNFEAATENFQKALMLNQNHVQTIQLGG 334
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
++ + + A+++ C++L+ N+ GL+ ++G++ + +A KA+
Sbjct: 335 MMLYHHGSPDEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKAM 388
>gi|145536925|ref|XP_001454184.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421929|emb|CAK86787.1| unnamed protein product [Paramecium tetraurelia]
Length = 393
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 136/267 (50%), Gaps = 14/267 (5%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD ++G A N + AI +++++ +P +A +G A + E AI F
Sbjct: 107 NVDAWHNKGCALGNLNQNEEAIECYNEVISINPRDEQAWYDKGYALGNLNQNEEAIECFN 166
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI NP +AW +G A L + EAI+ ++A+ P + D H +G K +
Sbjct: 167 EAIYINPKYVDAWYNKGCALGNLKKYNEAIECYNEAISINPKNVDAWHNKGCALGKLNQY 226
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----- 554
N A+E + + ++++ GL+L+S+ +Y+ A E + +AI + F++AW
Sbjct: 227 NEAIECYNEAISINRKFARGCYNKGLSLASLNKYEDAIECYNEAISISPKFVDAWLKKGY 286
Query: 555 --GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
G+L Q+ E+A+EC + +YI+ ++ A++ +GL L L Q+++AI+ + +
Sbjct: 287 ALGNLNQY-------EEAIECFNEAIYINPKYFNAWYCKGLALRKLNQYEEAIECYNEAI 339
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAV 639
I+P N+ + + +Y EA+
Sbjct: 340 SINPKNVSAWNGKGCALGNLNQYNEAI 366
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 111/226 (49%)
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y +A +G + E AI + EAI +P +AW ++G A + +EAI +
Sbjct: 5 YVKAWNNKGYTLNDLNQYEEAIECYNEAISISPKFVDAWHKKGHALNDFNQYIEAIACYN 64
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+ + P +++G +N A+E + + ++ +N A+ G AL ++ +
Sbjct: 65 EVISINPRDEQAWYDKGCALGNLNQYNEAIECYNEAISINPKNVDAWHNKGCALGNLNQN 124
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
++A E + + I ++ +AW +L +E+A+EC + +YI+ ++ A++ +G
Sbjct: 125 EEAIECYNEVISINPRDEQAWYDKGYALGNLNQNEEAIECFNEAIYINPKYVDAWYNKGC 184
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L L ++ +AI+ + + I+P N++ + + + +Y EA+
Sbjct: 185 ALGNLKKYNEAIECYNEAISINPKNVDAWHNKGCALGKLNQYNEAI 230
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 110/221 (49%), Gaps = 2/221 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y AI +++ + P + +A +G A F + +EA I+ + E I NP +AW
Sbjct: 21 QYEEAIECYNEAISISPKFVDAWHKKGHALNDFNQYIEA-IACYNEVISINPRDEQAWYD 79
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A L + EAI+ ++A+ P + D H +G A+E + + ++
Sbjct: 80 KGCALGNLNQYNEAIECYNEAISINPKNVDAWHNKGCALGNLNQNEEAIECYNEVISINP 139
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ A+ G AL ++ + ++A E +AI ++ +++AW + +L +A+EC
Sbjct: 140 RDEQAWYDKGYALGNLNQNEEAIECFNEAIYINPKYVDAWYNKGCALGNLKKYNEAIECY 199
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ + I+ + A+H +G L L Q+ +AI+ + + I+
Sbjct: 200 NEAISINPKNVDAWHNKGCALGKLNQYNEAIECYNEAISIN 240
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 88/175 (50%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD ++G A +Y AI +++ + + + +G + A + E AI +
Sbjct: 209 NVDAWHNKGCALGKLNQYNEAIECYNEAISINRKFARGCYNKGLSLASLNKYEDAIECYN 268
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI +P +AW ++G A L + EAI+ ++A+ P + + +G+ K +
Sbjct: 269 EAISISPKFVDAWLKKGYALGNLNQYEEAIECFNEAIYINPKYFNAWYCKGLALRKLNQY 328
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+E + + ++ +N SA+ G AL ++ +Y +A + + +AI + F++AW
Sbjct: 329 EEAIECYNEAISINPKNVSAWNGKGCALGNLNQYNEAIKCYNEAISISPKFVDAW 383
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD ++G A N KY AI +++ + +P +A +G A + AI + E
Sbjct: 176 VDAWYNKGCALGNLKKYNEAIECYNEAISINPKNVDAWHNKGCALGKLNQYNEAIECYNE 235
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI N +G + A+L + +AI+ ++A+ P D ++G +
Sbjct: 236 AISINRKFARGCYNKGLSLASLNKYEDAIECYNEAISISPKFVDAWLKKGYALGNLNQYE 295
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------ 554
A+E + + ++ + +A+ GLAL + +Y++A E + +AI ++ + AW
Sbjct: 296 EAIECFNEAIYINPKYFNAWYCKGLALRKLNQYEEAIECYNEAISINPKNVSAWNGKGCA 355
Query: 555 -GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
G+L Q+ +A++C + + I +F A++
Sbjct: 356 LGNLNQY-------NEAIKCYNEAISISPKFVDAWY 384
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD L +G A N +Y AI F++ + +P Y A +G A + E AI + E
Sbjct: 278 VDAWLKKGYALGNLNQYEEAIECFNEAIYINPKYFNAWYCKGLALRKLNQYEEAIECYNE 337
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
AI NP AW +G A L + EAI+ ++A+ P D + +
Sbjct: 338 AISINPKNVSAWNGKGCALGNLNQYNEAIKCYNEAISISPKFVDAWYNKA 387
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 48/94 (51%)
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ +++AW + DL E+A+EC + + I +F A+H +G L+ Q+ +AI
Sbjct: 1 MNHKYVKAWNNKGYTLNDLNQYEEAIECYNEAISISPKFVDAWHKKGHALNDFNQYIEAI 60
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + I+P + + Y + + +Y EA+
Sbjct: 61 ACYNEVISINPRDEQAWYDKGCALGNLNQYNEAI 94
>gi|428320933|ref|YP_007118815.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428244613|gb|AFZ10399.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 471
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 146/287 (50%), Gaps = 3/287 (1%)
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDP 412
K TS + +KK + +++ + D L+ RG + N G AI+ F++ ++ P
Sbjct: 15 KPTSQDDLGDKKGAIADYNRAIELQPDDALAYYNRGNVRYNLGDKKGAIADFNKAIELQP 74
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
EA RG R+ + + AI+D +AI+ P A+ RG R+ LG+ AI D
Sbjct: 75 DLAEAYGNRGLFRSELGDKKGAIADLNKAIELQPDLALAYVNRGAVRSKLGDKKGAIADY 134
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+KA+E +P+ A + RG+V + D A+ D + ++L + AY GL S +G+
Sbjct: 135 NKAIELQPDYAQAYYNRGLVRSELGDKKGAIADYNKAIELKPDLALAYYNRGLVRSELGD 194
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
K A + KAI+L ++ +A+G+ +L + + A+ L +V+ + ++AY+ RG
Sbjct: 195 KKGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRG 254
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L LG K AI D + + + P + + Y R + + +G+ + A+
Sbjct: 255 LFRSELGDKKGAIADFNKAIELQPDDAQAYYKRGNVRYILGDKKGAI 301
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 138/278 (49%), Gaps = 3/278 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+KK + +K+ + D L+ RG+ + G AI+ +++ ++ P Y +A R
Sbjct: 160 DKKGAIADYNKAIELKPDLALAYYNRGLVRSELGDKKGAIADYNKAIELQPDYAQAYGNR 219
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
GT R+ + + AI+D + I+ P +A+ RG R+ LG+ AI D +KA+E +P+
Sbjct: 220 GTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRGLFRSELGDKKGAIADFNKAIELQPD 279
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A ++RG V + D A+ D + ++L ++ AY G +G+ K A +
Sbjct: 280 DAQAYYKRGNVRYILGDKKGAITDFNKAIELQPDDAFAYYNRGNVRYILGDKKGAIADYN 339
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+L + +A+ + +L + + + +V+ + ++ AY RGL+ + LG
Sbjct: 340 KAIELKPDDAQAYFNRGNVRSELGDKKGEIADYNKVIELQPDYADAYINRGLVRYDLGDK 399
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
K AI DL+ + + P R + + +G+ + A+
Sbjct: 400 KGAIADLNKAIELQPDYAFAYGNRGNVRYNLGDKKGAI 437
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 136/278 (48%), Gaps = 3/278 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+KK + +K+ + D + RG+ + G AI+ ++ ++ P A + R
Sbjct: 58 DKKGAIADFNKAIELQPDLAEAYGNRGLFRSELGDKKGAIADLNKAIELQPDLALAYVNR 117
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R+ + + AI+D+ +AI+ P +A+ RG R+ LG+ AI D +KA+E +P+
Sbjct: 118 GAVRSKLGDKKGAIADYNKAIELQPDYAQAYYNRGLVRSELGDKKGAIADYNKAIELKPD 177
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A + RG+V + D A+ D + ++L + AY G S +G+ K A
Sbjct: 178 LALAYYNRGLVRSELGDKKGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAIADLN 237
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
K I+L + +A+ + F +L + + A+ + + + ++AY+ RG + + LG
Sbjct: 238 KVIELKPDLAQAYYNRGLFRSELGDKKGAIADFNKAIELQPDDAQAYYKRGNVRYILGDK 297
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
K AI D + + + P + Y R + + +G+ + A+
Sbjct: 298 KGAITDFNKAIELQPDDAFAYYNRGNVRYILGDKKGAI 335
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 127/248 (51%), Gaps = 5/248 (2%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+KK + +K+ + D+ + RG + G AI+ +++++ P +A R
Sbjct: 194 DKKGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAIADLNKVIELKPDLAQAYYNR 253
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R+ + + AI+DF +AI+ P +A+ +RG R LG+ AI D +KA+E +P+
Sbjct: 254 GLFRSELGDKKGAIADFNKAIELQPDDAQAYYKRGNVRYILGDKKGAITDFNKAIELQPD 313
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA-H 540
A + RG V + D A+ D + ++L ++ AY G S +G+ KK E A +
Sbjct: 314 DAFAYYNRGNVRYILGDKKGAIADYNKAIELKPDDAQAYFNRGNVRSELGD-KKGEIADY 372
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
K I+L ++ +A+ + DL + + A+ L + + + ++ AY RG + + LG
Sbjct: 373 NKVIELQPDYADAYINRGLVRYDLGDKKGAIADLNKAIELQPDYAFAYGNRGNVRYNLGD 432
Query: 601 HKKAIKDL 608
K AI+DL
Sbjct: 433 KKGAIEDL 440
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 132/273 (48%), Gaps = 3/273 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+KK + ++K+ + D L+ RG + G AI+ +++ ++ P Y +A R
Sbjct: 92 DKKGAIADLNKAIELQPDLALAYVNRGAVRSKLGDKKGAIADYNKAIELQPDYAQAYYNR 151
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R+ + + AI+D+ +AI+ P A+ RG R+ LG+ AI D +KA+E +P+
Sbjct: 152 GLVRSELGDKKGAIADYNKAIELKPDLALAYYNRGLVRSELGDKKGAIADYNKAIELQPD 211
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A RG V + D A+ DL+ ++L + AY GL S +G+ K A
Sbjct: 212 YAQAYGNRGTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRGLFRSELGDKKGAIADFN 271
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+L + +A+ L + + A+ + + + + AY+ RG + + LG
Sbjct: 272 KAIELQPDDAQAYYKRGNVRYILGDKKGAITDFNKAIELQPDDAFAYYNRGNVRYILGDK 331
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
K AI D + + + P + + + R + +G+
Sbjct: 332 KGAIADYNKAIELKPDDAQAYFNRGNVRSELGD 364
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 365 NKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+KK + ++K + D +RG+ + G AI+ F++ ++ P +A R
Sbjct: 228 DKKGAIADLNKVIELKPDLAQAYYNRGLFRSELGDKKGAIADFNKAIELQPDDAQAYYKR 287
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R + + AI+DF +AI+ P A+ RG R LG+ AI D +KA+E +P+
Sbjct: 288 GNVRYILGDKKGAITDFNKAIELQPDDAFAYYNRGNVRYILGDKKGAIADYNKAIELKPD 347
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A RG V + D + D + ++L + AY GL +G+ K A
Sbjct: 348 DAQAYFNRGNVRSELGDKKGEIADYNKVIELQPDYADAYINRGLVRYDLGDKKGAIADLN 407
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
KAI+L ++ A+G+ +L + + A+E LQ+
Sbjct: 408 KAIELQPDYAFAYGNRGNVRYNLGDKKGAIEDLQKA 443
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 10 RYRLNKTHKTICEIDELVRVDSVMASAITAR----IELA-KLCSLRNWSKAIRILDSLLA 64
RY L I + ++ + + +A A R EL K ++ + +KAI L LA
Sbjct: 53 RYNLGDKKGAIADFNKAIELQPDLAEAYGNRGLFRSELGDKKGAIADLNKAIE-LQPDLA 111
Query: 65 QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
+Y NR S+L K I D +KA++L P QAY +G S LG K+ A++
Sbjct: 112 LAY-----VNRGAVRSKLGDKKGAIADYNKAIELQPDYAQAYYNRGLVRSELGDKKGAIA 166
Query: 125 VWEKGYE 131
+ K E
Sbjct: 167 DYNKAIE 173
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 25/155 (16%)
Query: 10 RYRLNKTHKTICEIDELVRVDSVMASAI----TARIELA-KLCSLRNWSKAIRILDSLLA 64
R +L I + ++ + + A A R EL K ++ +++KAI + L
Sbjct: 121 RSKLGDKKGAIADYNKAIELQPDYAQAYYNRGLVRSELGDKKGAIADYNKAIELKPDLAL 180
Query: 65 QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
Y NR S+L K I D +KA++L P QAY +G S LG K+ A+
Sbjct: 181 AYY------NRGLVRSELGDKKGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAI- 233
Query: 125 VWEKGYEHALHQSADLKQFLELEELLTAAKQDRSV 159
ADL + +EL+ L A +R +
Sbjct: 234 -------------ADLNKVIELKPDLAQAYYNRGL 255
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 40 RIELA-KLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQL 98
R EL K ++ +++KAI L AQ+Y NR S+L K I D +K ++L
Sbjct: 189 RSELGDKKGAIADYNKAIE-LQPDYAQAY-----GNRGTVRSELGDKKGAIADLNKVIEL 242
Query: 99 DPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
P L QAY +G S LG K+ A++ + K E
Sbjct: 243 KPDLAQAYYNRGLFRSELGDKKGAIADFNKAIE 275
>gi|449497203|ref|XP_002190494.2| PREDICTED: tetratricopeptide repeat protein 13 [Taeniopygia
guttata]
Length = 839
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 133/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 130 IGNGLYDEAIRHFSTMLQEEPELVSAIYGRGIAYGKKGLHDMKNAELALFELSRVISLEP 189
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 190 DHPEVFEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 248
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 249 QRSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGN 308
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ A E Q+ L +++ + L+G++L+ G +A+K+ L ++P N C Y++
Sbjct: 309 FDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNFKRCLQLEPYNEVCQYMKG 368
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 369 LSHVAMGQFYEGI 381
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG YA+A F + L+ + P A++ +G + L+ AI F EA++
Sbjct: 231 RGTLYFISEDYATAHEDFQRSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKA 290
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG A + KAL N L +G++ + + A+++
Sbjct: 291 DFIDAYKSLGQAYRELGNFDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNF 350
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 351 KRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 388
>gi|414078778|ref|YP_006998096.1| hypothetical protein ANA_C13625 [Anabaena sp. 90]
gi|413972194|gb|AFW96283.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 383
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 128/245 (52%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI +D++++ P EAL RG A + +AAI D+ + ++ NP+ A+
Sbjct: 108 GDYRGAILAYDEVIRLTPNNSEALFYRGMAYYNLGDNQAAIQDYNQVLKINPNDANAYIN 167
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG R ALG+ AIQD ++AL+ PN A+ RG+ D A+ED + +K++
Sbjct: 168 RGNLRDALGDKQAAIQDYNQALKINPNYAEAYLNRGLTRDDLGDKKGAIEDYNQALKINP 227
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +Y G A +G+ K A E + +A++++ N ++ + L + + A++
Sbjct: 228 NDAVSYRNRGNARDDLGDKKGAIEDYNQALKINPNDAVSYLNRGNLRDALGDKQAAIQDY 287
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q L I+ +++AY RG+ LG + I+D + L I+P+ + Y R + Y +G+
Sbjct: 288 NQALKINPNYAEAYLNRGVARDTLGDKQAVIQDFNQALKINPNYAKAYYNRGNAYATLGD 347
Query: 635 YREAV 639
+A+
Sbjct: 348 KFQAI 352
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 126/245 (51%), Gaps = 3/245 (1%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V R++ + S ++ +R G+A N G +AI ++Q+LK +P A I RG R
Sbjct: 120 VIRLTPNNSEALFYR---GMAYYNLGDNQAAIQDYNQVLKINPNDANAYINRGNLRDALG 176
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ +AAI D+ +A++ NP+ EA+ RG R LG+ AI+D ++AL+ PN A R
Sbjct: 177 DKQAAIQDYNQALKINPNYAEAYLNRGLTRDDLGDKKGAIEDYNQALKINPNDAVSYRNR 236
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G D A+ED + +K++ + +Y G ++G+ + A + + +A++++ N
Sbjct: 237 GNARDDLGDKKGAIEDYNQALKINPNDAVSYLNRGNLRDALGDKQAAIQDYNQALKINPN 296
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ EA+ + L + + ++ Q L I+ ++KAY+ RG LG +AI D
Sbjct: 297 YAEAYLNRGVARDTLGDKQAVIQDFNQALKINPNYAKAYYNRGNAYATLGDKFQAISDFQ 356
Query: 610 SGLGI 614
I
Sbjct: 357 QAAKI 361
>gi|118088252|ref|XP_419586.2| PREDICTED: tetratricopeptide repeat protein 13 [Gallus gallus]
Length = 847
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 133/253 (52%), Gaps = 6/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 138 IGNGLYDEAIRQFSTMLQEEPELVSAIYGRGIAYGKKGLHDVKNAELALFELSRVISLEP 197
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 198 DHPEVFEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 256
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 257 QHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGN 316
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ A E Q+ L +++ + L+G++L+ G +A+K+ L ++P N C Y++
Sbjct: 317 FDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNFKRCLQLEPYNEVCQYMKG 376
Query: 627 SCYHAIGEYREAV 639
+ A+G++ E +
Sbjct: 377 LSHVAMGQFYEGI 389
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG YA+A F L+ + P A++ +G + L+ AI F EA++
Sbjct: 239 RGTLYFISEDYATAHEDFQHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKA 298
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG A + KAL N L +G++ + + A+++
Sbjct: 299 DFIDAYKSLGQAYRELGNFDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNF 358
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 359 KRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 396
>gi|119509305|ref|ZP_01628455.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414]
gi|119466147|gb|EAW47034.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414]
Length = 608
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 127/251 (50%), Gaps = 8/251 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ FDQ L+ +P + EA R AR F + E AI+DF +AI+ P+ +++ RG
Sbjct: 54 YHGAIANFDQALEINPQFAEAYCNRANARYFLGDYEGAIADFDQAIEIKPNFTQSYHSRG 113
Query: 457 QARAALGESVEAIQDLSKALEFEPNSA-----DI---LHERGIVNFKFKDFNAAVEDLSA 508
A AL + +AI + +A+E P A DI LH RG+ + D+ A+ D
Sbjct: 114 NAYLALEKYDQAIANYQQAIENSPELATQINCDIAKALHNRGVARCNYGDYQGAIADFQQ 173
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++ AY+ G +GEY++A H +A+QLD N E + + L +++
Sbjct: 174 ALQWHPYFAPAYSSRGNIYQILGEYQQAIAEHDRALQLDPNLAEVYHNRGNARYALGDNQ 233
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
A++ L I F++AY+ RGL+ L +AI D + L ++P +++ R
Sbjct: 234 GAIKDYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSERGLI 293
Query: 629 YHAIGEYREAV 639
+GEY +A+
Sbjct: 294 RETLGEYYQAL 304
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 145/289 (50%), Gaps = 3/289 (1%)
Query: 351 KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE 410
K+D +A N T+I+ + ++ +RG+A+ N G Y AI+ F Q L+
Sbjct: 121 KYDQAIANYQQAIENSPELATQINCDIAKALH---NRGVARCNYGDYQGAIADFQQALQW 177
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
P + A RG E + AI++ A+Q +P+ E + RG AR ALG++ AI+
Sbjct: 178 HPYFAPAYSSRGNIYQILGEYQQAIAEHDRALQLDPNLAEVYHNRGNARYALGDNQGAIK 237
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D + AL+ +P+ A+ + RG+V + KDF A+ D + + L+ ++ AY+ GL ++
Sbjct: 238 DYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSERGLIRETL 297
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
GEY +A E + +A+Q + +G + L + + A++ Q L + ++ Y
Sbjct: 298 GEYYQALEDYSQALQKNPTLALVYGLRANVRRLLGDYQGAIDDSNQSLKLHPHLAQGYCD 357
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
R G ++ A++D + L I+ + E Y RA Y + ++ AV
Sbjct: 358 RATTRRIQGDYQGAVQDYTMALQINCNLAEAYYGRAIAYEFLQDFAAAV 406
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 120/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G AI ++ LK P + EA RG + ++ AI+DF +A+ N
Sbjct: 221 NRGNARYALGDNQGAIKDYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILN 280
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG R LGE +A++D S+AL+ P A + R V D+ A++D
Sbjct: 281 PDDVQAYSERGLIRETLGEYYQALEDYSQALQKNPTLALVYGLRANVRRLLGDYQGAIDD 340
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL Y G+Y+ A + + A+Q++ N EA+ Y+ L
Sbjct: 341 SNQSLKLHPHLAQGYCDRATTRRIQGDYQGAVQDYTMALQINCNLAEAYYGRAIAYEFLQ 400
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A+ Q + + FS AY RG L K+A+ D + L I+P +E Y R
Sbjct: 401 DFAAAVADNTQAIQMFPDFSPAYCNRGNAHRFLRNEKQAMADYNQALAINPDLVEAYYNR 460
Query: 626 ASCYHAIGEYREAV 639
A + + +Y+ AV
Sbjct: 461 ACLRYTLKDYQSAV 474
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 8/262 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYP--------EALIGRGTARAFQRELEAAISD 437
SRG A + KY AI+ + Q ++ P +AL RG AR + + AI+D
Sbjct: 111 SRGNAYLALEKYDQAIANYQQAIENSPELATQINCDIAKALHNRGVARCNYGDYQGAIAD 170
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F +A+Q +P A+ RG LGE +AI + +AL+ +PN A++ H RG +
Sbjct: 171 FQQALQWHPYFAPAYSSRGNIYQILGEYQQAIAEHDRALQLDPNLAEVYHNRGNARYALG 230
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D A++D + +K+ AY GL S + ++ +A +A+ L+ + ++A+
Sbjct: 231 DNQGAIKDYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSER 290
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ L +ALE Q L + + Y LR + LG ++ AI D + L + P
Sbjct: 291 GLIRETLGEYYQALEDYSQALQKNPTLALVYGLRANVRRLLGDYQGAIDDSNQSLKLHPH 350
Query: 618 NIECLYLRASCYHAIGEYREAV 639
+ RA+ G+Y+ AV
Sbjct: 351 LAQGYCDRATTRRIQGDYQGAV 372
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 121/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + AI+ F+Q L +P +A RG R E A+ D+++A+Q N
Sbjct: 255 NRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSERGLIRETLGEYYQALEDYSQALQKN 314
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + R R LG+ AI D +++L+ P+ A +R D+ AV+D
Sbjct: 315 PTLALVYGLRANVRRLLGDYQGAIDDSNQSLKLHPHLAQGYCDRATTRRIQGDYQGAVQD 374
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY +A + ++ A + +AIQ+ +F A+ + ++ L
Sbjct: 375 YTMALQINCNLAEAYYGRAIAYEFLQDFAAAVADNTQAIQMFPDFSPAYCNRGNAHRFLR 434
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N ++A+ Q L I+ +AY+ R L + L ++ A+ D + L +P + R
Sbjct: 435 NEKQAMADYNQALAINPDLVEAYYNRACLRYTLKDYQSAVADYTEALQRNPQSATFYSDR 494
Query: 626 ASCYHAIGEYREAV 639
A+ +A+ +Y A+
Sbjct: 495 ANARYALQDYHGAI 508
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G Y A+ + L+ + EA GR A F ++ AA++D T+AIQ P A+
Sbjct: 365 QGDYQGAVQDYTMALQINCNLAEAYYGRAIAYEFLQDFAAAVADNTQAIQMFPDFSPAYC 424
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A L +A+ D ++AL P+ + + R + + KD+ +AV D + ++ +
Sbjct: 425 NRGNAHRFLRNEKQAMADYNQALAINPDLVEAYYNRACLRYTLKDYQSAVADYTEALQRN 484
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ + Y+ A ++ +Y A + +A+ +D + E W + + L + AL
Sbjct: 485 PQSATFYSDRANARYALQDYHGAIADYHQALAIDSSRAEDWYNRGRSLSMLGDLTAALAD 544
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
L Q L ++ AY LR + L ++ AI D I
Sbjct: 545 LNQALQCQPYWASAYMLRADIRRQLEDYQGAIADFQKSADI 585
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 131/293 (44%), Gaps = 15/293 (5%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPM 413
+++ET E + + + K+ ++++ + L + ++ G Y AI +Q LK P
Sbjct: 292 LIRETLGEYYQALEDYSQALQKNPTLALVYGLRANVRRL-LGDYQGAIDDSNQSLKLHPH 350
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ R T R Q + + A+ D+T A+Q N + EA+ R A L + A+ D +
Sbjct: 351 LAQGYCDRATTRRIQGDYQGAVQDYTMALQINCNLAEAYYGRAIAYEFLQDFAAAVADNT 410
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+A++ P+ + RG + ++ A+ D + + ++ + AY ++ +Y
Sbjct: 411 QAIQMFPDFSPAYCNRGNAHRFLRNEKQAMADYNQALAINPDLVEAYYNRACLRYTLKDY 470
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ-------QVLYIDKRFSK 586
+ A + +A+Q RN A FY D AN+ AL+ Q L ID ++
Sbjct: 471 QSAVADYTEALQ--RNPQSA-----TFYSDRANARYALQDYHGAIADYHQALAIDSSRAE 523
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ RG L LG A+ DL+ L P LRA + +Y+ A+
Sbjct: 524 DWYNRGRSLSMLGDLTAALADLNQALQCQPYWASAYMLRADIRRQLEDYQGAI 576
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
R IA +A+A++ Q ++ P + A RG A F R + A++D+ +A+ N
Sbjct: 391 GRAIAYEFLQDFAAAVADNTQAIQMFPDFSPAYCNRGNAHRFLRNEKQAMADYNQALAIN 450
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ R R L + A+ D ++AL+ P SA +R + +D++ A+ D
Sbjct: 451 PDLVEAYYNRACLRYTLKDYQSAVADYTEALQRNPQSATFYSDRANARYALQDYHGAIAD 510
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA--------------EEAHLKAIQLDRNFL 551
+ +D + G +LS +G+ A A++ + R
Sbjct: 511 YHQALAIDSSRAEDWYNRGRSLSMLGDLTAALADLNQALQCQPYWASAYMLRADIRRQLE 570
Query: 552 EAWGHLTQFYQ--DLANSEKALECLQQVL 578
+ G + F + D+ N + +E QQ+L
Sbjct: 571 DYQGAIADFQKSADIYNRDGNIEYYQQIL 599
>gi|220922451|ref|YP_002497753.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947058|gb|ACL57450.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 1022
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 129/255 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + N+G+Y AI+ ++Q L+ DP A + RG + E + AI+D+ +A++ +
Sbjct: 31 TRGYSFQNKGEYDRAIADYNQALRLDPKLTAAYVNRGFTFRSKGEYDRAIADYNQALRLD 90
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A+ RG A G+ AI D ++AL+ +P + + RG +++ A+ D
Sbjct: 91 PRSVIAYNNRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRAIAD 150
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD AY G A GEY +A + +A++LD + A+ + ++
Sbjct: 151 YNQALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKG 210
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+A+ Q L D + AY+ RGL +G++ +AI D + L ++P + + R
Sbjct: 211 EYNRAIADYNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNR 270
Query: 626 ASCYHAIGEYREAVI 640
A + GEY A++
Sbjct: 271 ADAFRIKGEYDRAIV 285
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 128/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N+G+Y AI+ + Q L+ DP Y A + RG A + E + AI+D+ +A++ N
Sbjct: 303 NRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNRGDAFRNKGENDVAIADYNQALRLN 362
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A+ RG A GE AI D +A+ +P SA + RG +++ A+ D
Sbjct: 363 PSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRGFALQSKGEYDRAITD 422
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ ++ YT G S GEY +A + A+Q D + A+ + ++
Sbjct: 423 YNQALQLNPKSAITYTNRGFVFQSKGEYDRAIADYDLALQFDPKYAIAYTNRGDVFRSKG 482
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ Q + ++ ++ AY+ RGL L G+ +AI + L ++P I R
Sbjct: 483 EYDRAIANYDQAIQLNPKYVVAYNNRGLALQNKGEPDRAIANYDQALQLNPRYIVAYINR 542
Query: 626 ASCYHAIGEYREAV 639
+ + GE AV
Sbjct: 543 GDAFRSKGECDRAV 556
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 128/249 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G Y AI+ +++ L+ DP +P RG A + E + AI+D+ +A+Q +
Sbjct: 99 NRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRAIADYNQALQLD 158
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A GE AI D S+AL +P A RG V ++N A+ D
Sbjct: 159 PNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKGEYNRAIAD 218
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++ D + AY GLA ++GEY +A + +A++L+ ++ A + ++
Sbjct: 219 YNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNRADAFRIKG 278
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ Q L+++ ++ AY+ RGL G++ +AI D S L +DP + R
Sbjct: 279 EYDRAIVDYDQALHLNPNYAIAYNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNR 338
Query: 626 ASCYHAIGE 634
+ GE
Sbjct: 339 GDAFRNKGE 347
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 131/255 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A N+G+ AI+ ++Q L+ +P Y A RG A + E + AI+D+ +AI+
Sbjct: 336 VNRGDAFRNKGENDVAIADYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRL 395
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P + A+ RG A + GE AI D ++AL+ P SA RG V +++ A+
Sbjct: 396 DPKSAIAYNNRGFALQSKGEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIA 455
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++ D + AYT G S GEY +A + +AIQL+ ++ A+ + Q+
Sbjct: 456 DYDLALQFDPKYAIAYTNRGDVFRSKGEYDRAIANYDQAIQLNPKYVVAYNNRGLALQNK 515
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ Q L ++ R+ AY RG G+ +A+ D + GL +D +N+
Sbjct: 516 GEPDRAIANYDQALQLNPRYIVAYINRGDAFRSKGECDRAVSDYNQGLELDHNNVLAYNN 575
Query: 625 RASCYHAIGEYREAV 639
R C+ GEY A+
Sbjct: 576 RGLCFQNRGEYDLAI 590
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 131/268 (48%), Gaps = 3/268 (1%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R++ S S + + +RG+A N+G+Y AI+ ++Q ++ DP A RG A + E
Sbjct: 360 RLNPSYSTAYN---TRGLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRGFALQSKGEY 416
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+D+ +A+Q NP + + RG + GE AI D AL+F+P A RG
Sbjct: 417 DRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIADYDLALQFDPKYAIAYTNRGD 476
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V +++ A+ + ++L+ + AY GLAL + GE +A + +A+QL+ ++
Sbjct: 477 VFRSKGEYDRAIANYDQAIQLNPKYVVAYNNRGLALQNKGEPDRAIANYDQALQLNPRYI 536
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ + ++ ++A+ Q L +D AY+ RGL G++ AI D
Sbjct: 537 VAYINRGDAFRSKGECDRAVSDYNQGLELDHNNVLAYNNRGLCFQNRGEYDLAIADYDHA 596
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
L IDP R + EY A+
Sbjct: 597 LQIDPKYATAFVNRGFAFQKKSEYDRAI 624
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 122/255 (47%), Gaps = 2/255 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G+Y AIS + + L+ +P Y A++ R A + E + AI D+ +A+ N
Sbjct: 235 NRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNRADAFRIKGEYDRAIVDYDQALHLN 294
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVE 504
P+ A+ RG A GE AI D S+AL +P RG F+ K N A+
Sbjct: 295 PNYAIAYNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNRGDA-FRNKGENDVAIA 353
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ +AY GLA + GEY +A + +AI+LD A+ + Q
Sbjct: 354 DYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRGFALQSK 413
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ Q L ++ + + Y RG + G++ +AI D L DP
Sbjct: 414 GEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIADYDLALQFDPKYAIAYTN 473
Query: 625 RASCYHAIGEYREAV 639
R + + GEY A+
Sbjct: 474 RGDVFRSKGEYDRAI 488
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 34/288 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +G+Y AI+ ++Q L+ DP Y A RG A + E + AI+D+++A++ +
Sbjct: 133 NRGFAFHGKGEYDRAIADYNQALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLD 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG--------------- 490
P A+ RG + GE AI D ++AL+F+P + RG
Sbjct: 193 PKYAIAYTNRGDVFRSKGEYNRAIADYNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISD 252
Query: 491 --------------IVN----FKFK-DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+VN F+ K +++ A+ D + L+ AY GLA + G
Sbjct: 253 YTEALRLEPKYVIAVVNRADAFRIKGEYDRAIVDYDQALHLNPNYAIAYNNRGLAFQNKG 312
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
EY +A + +A++LD ++ A+ + +++ ++ A+ Q L ++ +S AY+ R
Sbjct: 313 EYDRAIADYSQALRLDPKYVIAFVNRGDAFRNKGENDVAIADYNQALRLNPSYSTAYNTR 372
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
GL G++ +AI D + +DP + R + GEY A+
Sbjct: 373 GLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRGFALQSKGEYDRAI 420
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 125/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ ++Q L+ DP A RG A E + AISD+TEA++
Sbjct: 201 NRGDVFRSKGEYNRAIADYNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLE 260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A R A GE AI D +AL PN A + RG+ +++ A+ D
Sbjct: 261 PKYVIAVVNRADAFRIKGEYDRAIVDYDQALHLNPNYAIAYNNRGLAFQNKGEYDRAIAD 320
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++LD + A+ G A + GE A + +A++L+ ++ A+ +Q+
Sbjct: 321 YSQALRLDPKYVIAFVNRGDAFRNKGENDVAIADYNQALRLNPSYSTAYNTRGLAFQNKG 380
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ +Q + +D + + AY+ RG L G++ +AI D + L ++P + R
Sbjct: 381 EYDRAIADYEQAIRLDPKSAIAYNNRGFALQSKGEYDRAITDYNQALQLNPKSAITYTNR 440
Query: 626 ASCYHAIGEYREAV 639
+ + GEY A+
Sbjct: 441 GFVFQSKGEYDRAI 454
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+Y AI +DQ L +P Y A RG A + E + AI+D+++A++ +P A+
Sbjct: 277 KGEYDRAIVDYDQALHLNPNYAIAYNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFV 336
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A GE+ AI D ++AL P+ + + RG+ +++ A+ D ++LD
Sbjct: 337 NRGDAFRNKGENDVAIADYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRLD 396
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ AY G AL S GEY +A + +A+QL+ + + +Q ++A+
Sbjct: 397 PKSAIAYNNRGFALQSKGEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIAD 456
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
L D +++ AY RG + G++ +AI + + ++P +
Sbjct: 457 YDLALQFDPKYAIAYTNRGDVFRSKGEYDRAIANYDQAIQLNPKYV 502
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 21/268 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ +D L+ DP Y A RG + E + AI+++ +AIQ N
Sbjct: 439 NRGFVFQSKGEYDRAIADYDLALQFDPKYAIAYTNRGDVFRSKGEYDRAIANYDQAIQLN 498
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFKD 498
P A+ RG A GE AI + +AL+ P N D +G + D
Sbjct: 499 PKYVVAYNNRGLALQNKGEPDRAIANYDQALQLNPRYIVAYINRGDAFRSKGECDRAVSD 558
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+N +E LD N AY GL + GEY A + A+Q+D + A+ +
Sbjct: 559 YNQGLE-------LDHNNVLAYNNRGLCFQNRGEYDLAIADYDHALQIDPKYATAFVNRG 611
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+Q + ++A+ + L +D + + AY+ RG G + AI D L + P
Sbjct: 612 FAFQKKSEYDRAIADYDRALQLDPKSAVAYNNRGFAFQSKGAYDLAIADYDHALLLKPGL 671
Query: 619 IECLYLRASCY-------HAIGEYREAV 639
Y R + + H+I + EA+
Sbjct: 672 ANAYYHRGTVFSFKGNLDHSISDLSEAI 699
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ +DQ ++ +P Y A RG A + E + AI+++ +A+Q N
Sbjct: 473 NRGDVFRSKGEYDRAIANYDQAIQLNPKYVVAYNNRGLALQNKGEPDRAIANYDQALQLN 532
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + GE A+ D ++ LE + N+ + RG+ +++ A+ D
Sbjct: 533 PRYIVAYINRGDAFRSKGECDRAVSDYNQGLELDHNNVLAYNNRGLCFQNRGEYDLAIAD 592
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++D + +A+ G A EY +A + +A+QLD A+ + +Q
Sbjct: 593 YDHALQIDPKYATAFVNRGFAFQKKSEYDRAIADYDRALQLDPKSAVAYNNRGFAFQSKG 652
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A+ L + + AY+ RG + G +I DLS + ++P E R
Sbjct: 653 AYDLAIADYDHALLLKPGLANAYYHRGTVFSFKGNLDHSISDLSEAIRLNPKYAEAYQDR 712
Query: 626 ASCYHAIGE 634
Y A GE
Sbjct: 713 GITYQARGE 721
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N+G+ AI+ +DQ L+ +P Y A I RG A + E + A+SD+ + ++ +
Sbjct: 507 NRGLALQNKGEPDRAIANYDQALQLNPRYIVAYINRGDAFRSKGECDRAVSDYNQGLELD 566
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ RG GE AI D AL+ +P A RG K +++ A+ D
Sbjct: 567 HNNVLAYNNRGLCFQNRGEYDLAIADYDHALQIDPKYATAFVNRGFAFQKKSEYDRAIAD 626
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD ++ AY G A S G Y A + A+ L A+ H +
Sbjct: 627 YDRALQLDPKSAVAYNNRGFAFQSKGAYDLAIADYDHALLLKPGLANAYYHRGTVFSFKG 686
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
N + ++ L + + ++ ++++AY RG+ G+ +A+ D + + P
Sbjct: 687 NLDHSISDLSEAIRLNPKYAEAYQDRGITYQARGEPDRALADFAEAARLKP 737
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ ++Q L+ +P RG + E + AI+D+ A+Q +
Sbjct: 405 NRGFALQSKGEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIADYDLALQFD 464
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG + GE AI + +A++ P + RG+ + + A+ +
Sbjct: 465 PKYAIAYTNRGDVFRSKGEYDRAIANYDQAIQLNPKYVVAYNNRGLALQNKGEPDRAIAN 524
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ AY G A S GE +A + + ++LD N + A+ + +Q+
Sbjct: 525 YDQALQLNPRYIVAYINRGDAFRSKGECDRAVSDYNQGLELDHNNVLAYNNRGLCFQNRG 584
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A+ L ID +++ A+ RG ++ +AI D L +DP + R
Sbjct: 585 EYDLAIADYDHALQIDPKYATAFVNRGFAFQKKSEYDRAIADYDRALQLDPKSAVAYNNR 644
Query: 626 ASCYHAIGEYREAV 639
+ + G Y A+
Sbjct: 645 GFAFQSKGAYDLAI 658
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK---DFNAAVEDLS 507
+ RG + GE AI D ++AL +P RG F F+ +++ A+ D +
Sbjct: 28 GYNTRGYSFQNKGEYDRAIADYNQALRLDPKLTAAYVNRG---FTFRSKGEYDRAIADYN 84
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD + AY G A G+Y++A + +A+QLD + + +
Sbjct: 85 QALRLDPRSVIAYNNRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEY 144
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
++A+ Q L +D ++ AY+ RG G G++ +AI D S L +DP R
Sbjct: 145 DRAIADYNQALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGD 204
Query: 628 CYHAIGEYREAV 639
+ + GEY A+
Sbjct: 205 VFRSKGEYNRAI 216
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 34/164 (20%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N G+Y AI+ +D L+ DP Y A + RG A + E + AI+D+ A+Q +
Sbjct: 575 NRGLCFQNRGEYDLAIADYDHALQIDPKYATAFVNRGFAFQKKSEYDRAIADYDRALQLD 634
Query: 446 PSAGEAWKRRG---QARAAL-------------------------------GESVEAIQD 471
P + A+ RG Q++ A G +I D
Sbjct: 635 PKSAVAYNNRGFAFQSKGAYDLAIADYDHALLLKPGLANAYYHRGTVFSFKGNLDHSISD 694
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
LS+A+ P A+ +RGI + + A+ D + +L E
Sbjct: 695 LSEAIRLNPKYAEAYQDRGITYQARGEPDRALADFAEAARLKPE 738
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
+ Y G + + GEY +A + +A++LD A+ + ++ ++A+ Q
Sbjct: 27 AGYNTRGYSFQNKGEYDRAIADYNQALRLDPKLTAAYVNRGFTFRSKGEYDRAIADYNQA 86
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
L +D R AY+ RG + G +++AI D + L +DP + R +H GEY
Sbjct: 87 LRLDPRSVIAYNNRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDR 146
Query: 638 AV 639
A+
Sbjct: 147 AI 148
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 28/115 (24%)
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR F + + + I D D+ALQLDP AY +G AF + G + A++ Y+
Sbjct: 607 FVNRGFAFQKKSEYDRAIADYDRALQLDPKSAVAYNNRGFAFQSKGAYDLAIA----DYD 662
Query: 132 HAL------------------------HQSADLKQFLELEELLTAAKQDRSVTCE 162
HAL H +DL + + L A QDR +T +
Sbjct: 663 HALLLKPGLANAYYHRGTVFSFKGNLDHSISDLSEAIRLNPKYAEAYQDRGITYQ 717
>gi|254417461|ref|ZP_05031201.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196175726|gb|EDX70750.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 374
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 135/262 (51%), Gaps = 14/262 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RGI + GK+ +AI+ FDQ+++ +P +PEA RGT+ + A++ F +AI
Sbjct: 79 LNRGIVLSDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMILGRNKEALASFDQAIAC 138
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ +AW RG LG A++ KAL PN +I + +G + + + + A+
Sbjct: 139 NPNYDKAWSNRGNVLTNLGRHKAALKSFDKALHISPNHPEIWYNQGCLLMQLQKRDDAIA 198
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------L 557
+ ++L ++ ++ G+ +S +G K+A + KA++ D N W + L
Sbjct: 199 SFNKALELKPDHIGSWINKGIVISEMGREKEALLYYEKALEFDPNETHCWNNRGLTMRRL 258
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ +A+ ++ALEC+ + +A+ RG L +G++++A+ L ++P
Sbjct: 259 GRLQDAVASYDRALECMPENY-------EAWDNRGYALVKMGRYREAMASFDKALEVNPD 311
Query: 618 NIECLYLRASCYHAIGEYREAV 639
++ +Y + CY A G+ AV
Sbjct: 312 HVNAVYNKGYCYAAQGKVTLAV 333
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V F + +G+ + G + +A+++F +K P EA G G A + E AI+ F
Sbjct: 6 AVKFIIQQGMRCLQGGDFDAAVALFQDAVKLTPENGEAWTGLGLALGHLQRYEEAIASFD 65
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A NP W RG + G+ AI + +E EP + + RG
Sbjct: 66 QAGVLNPQDASIWLNRGIVLSDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMILGRN 125
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ + + A++ G L+++G +K A ++ KA+ + N E W +
Sbjct: 126 KEALASFDQAIACNPNYDKAWSNRGNVLTNLGRHKAALKSFDKALHISPNHPEIWYNQGC 185
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
L + A+ + L + ++ +G+++ +G+ K+A+ L DP+
Sbjct: 186 LLMQLQKRDDAIASFNKALELKPDHIGSWINKGIVISEMGREKEALLYYEKALEFDPNET 245
Query: 620 ECLYLRASCYHAIGEYREAV 639
C R +G ++AV
Sbjct: 246 HCWNNRGLTMRRLGRLQDAV 265
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 2/231 (0%)
Query: 411 DPMYPEALIGRGTARAFQR-ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
DP + +I +G R Q + +AA++ F +A++ P GEAW G A L EAI
Sbjct: 3 DPKAVKFIIQQGM-RCLQGGDFDAAVALFQDAVKLTPENGEAWTGLGLALGHLQRYEEAI 61
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
+A P A I RGIV + AA+ ++ + + A+ G +L
Sbjct: 62 ASFDQAGVLNPQDASIWLNRGIVLSDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMI 121
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+G K+A + +AI + N+ +AW + +L + AL+ + L+I + ++
Sbjct: 122 LGRNKEALASFDQAIACNPNYDKAWSNRGNVLTNLGRHKAALKSFDKALHISPNHPEIWY 181
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+G LL L + AI + L + P +I + +G +EA++
Sbjct: 182 NQGCLLMQLQKRDDAIASFNKALELKPDHIGSWINKGIVISEMGREKEALL 232
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQ 443
+++GI G+ A+ +++ L+ DP RG T R R L+ A++ + A++
Sbjct: 215 INKGIVISEMGREKEALLYYEKALEFDPNETHCWNNRGLTMRRLGR-LQDAVASYDRALE 273
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P EAW RG A +G EA+ KALE P+ + ++ +G AV
Sbjct: 274 CMPENYEAWDNRGYALVKMGRYREAMASFDKALEVNPDHVNAVYNKGYCYAAQGKVTLAV 333
Query: 504 EDLSACVKLDKE 515
+ +K++ +
Sbjct: 334 NYIEQAIKVNPQ 345
>gi|67469147|ref|XP_650565.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
gi|56467204|gb|EAL45179.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
Length = 931
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 124/233 (53%), Gaps = 1/233 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN GK AI+ + L++ P I RGTA A + + A+ DF
Sbjct: 221 IDQELAIGYLLVNNGKLQEAINYLTKFLQKHPDVCGGYIARGTAYAMIGQYQMAVEDFGS 280
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDF 499
A+ +P +A KRRGQ ALG+ EA+ D++ A+++ D +RGI +++
Sbjct: 281 AVIIDPRNADAHKRRGQTLIALGKIDEALVDMNDAVKYGGEKDVDCYKQRGICYQMIRNY 340
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A +D CVK + + A+ + GL +++G +K+A EA +A+ + ++F++ + +L Q
Sbjct: 341 ELARDDFGVCVKRSQGDYIAWNHYGLNNTALGLFKEAAEAFGRAVSIKQDFVDGYVNLFQ 400
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+D +KA E + + + A++LRG+L +G H KA K+ + +
Sbjct: 401 LLKDAGKPKKAEEVFKIIFRLAPNHCFAHYLRGVLFQQIGHHIKATKEFAIAI 453
>gi|449708373|gb|EMD47849.1| tetratricopeptide repeatcontaining protein [Entamoeba histolytica
KU27]
Length = 793
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 124/233 (53%), Gaps = 1/233 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN GK AI+ + L++ P I RGTA A + + A+ DF
Sbjct: 83 IDQELAIGYLLVNNGKLQEAINYLTKFLQKHPDVCGGYIARGTAYAMIGQYQMAVEDFGS 142
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDF 499
A+ +P +A KRRGQ ALG+ EA+ D++ A+++ D +RGI +++
Sbjct: 143 AVIIDPRNADAHKRRGQTLIALGKIDEALVDMNDAVKYGGEKDVDCYKQRGICYQMIRNY 202
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A +D CVK + + A+ + GL +++G +K+A EA +A+ + ++F++ + +L Q
Sbjct: 203 ELARDDFGVCVKRSQGDYIAWNHYGLNNTALGLFKEAAEAFGRAVSIKQDFVDGYVNLFQ 262
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+D +KA E + + + A++LRG+L +G H KA K+ + +
Sbjct: 263 LLKDAGKPKKAEEVFKIIFRLAPNHCFAHYLRGVLFQQIGHHIKATKEFAIAI 315
>gi|167382099|ref|XP_001735971.1| tetratricopeptide repeat protein [Entamoeba dispar SAW760]
gi|165901772|gb|EDR27784.1| tetratricopeptide repeat protein, putative [Entamoeba dispar
SAW760]
Length = 933
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 1/233 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN GK A++ + L++ P I RGTA A + + A+ DF
Sbjct: 223 IDQELAIGYLLVNNGKLQEAVNYLTKFLQKHPNVCGGYIARGTAFAMIGQYQMAVEDFGS 282
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDF 499
A+ +P+ +A KRRGQ ALG+ EA+ D++ A+++ D +RGI +++
Sbjct: 283 AVDIDPTNADAHKRRGQTLIALGKINEALVDMNDAVKYGGEKDVDCYKQRGICYQMIRNY 342
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A +D CVK + + A+ + GL +++G +K+A EA +A+ + ++F++ + +L Q
Sbjct: 343 ELARDDFGVCVKRSQGDYIAWNHYGLNNTALGLFKEAAEAFGRAVSIKQDFVDGYVNLFQ 402
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+D KA + + + + A++LRG+L +G H KA K+ + +
Sbjct: 403 LLKDAGKPNKAEDVFKIIFRLAPNHCFAHYLRGVLFQQIGHHIKATKEFAIAI 455
>gi|167378211|ref|XP_001734716.1| tetratricopeptide repeat protein [Entamoeba dispar SAW760]
gi|165903665|gb|EDR29120.1| tetratricopeptide repeat protein, putative [Entamoeba dispar
SAW760]
Length = 912
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 137/271 (50%), Gaps = 12/271 (4%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN + A+ F LK+ P A +GRGTA A E AI DFT
Sbjct: 202 IDKELAMGYLYVNNNRVKEAVDYFTVFLKKYPNVVGAFLGRGTALAMLSNFEKAIQDFTS 261
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
AI+ +P G+A+KRRGQ A G+ E ++D +KA+E D +RG V K++
Sbjct: 262 AIKCDPKCGDAYKRRGQTLVACGKLYEGLEDFNKAIELSNGKDGDCYAQRGSVYQMLKNY 321
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
D V+ + + +++ +LGL +++G +A +A+ +A+Q+ +F+E + +L Q
Sbjct: 322 EKGRADFREAVRKNSMDFNSWNHLGLNNNALGLVAEAADAYARALQIKDDFIECYVNLAQ 381
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS---------- 609
++D N +++ + ++ + S +++ G+L G H AIK+ +
Sbjct: 382 LHKDAGNFQRSKDVFNKLFRMQPNHSNGHYICGVLYQQSGYHLAAIKEFTLAIDNRTEPI 441
Query: 610 SGLGIDPSNI-ECLYLRASCYHAIGEYREAV 639
SG+ DP + E R A G++R AV
Sbjct: 442 SGIEKDPERMCEAWRYRGVTRSASGQFRLAV 472
>gi|334322164|ref|XP_003340195.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein
13-like [Monodelphis domestica]
Length = 852
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 133/248 (53%), Gaps = 6/248 (2%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFTEAIQSNPSAGEA 451
+ +A+ F ++ E+P A+ GRG A + Q + E A+ + + I P E
Sbjct: 151 FINALLCFCFLVXEEPELVSAIYGRGIAYGKKGLQDIKNAELALFELSRVITLEPDRPEV 210
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+++R + + LG EA+ DL+KA++ +P SA + RG ++F +D+ A ED ++
Sbjct: 211 FEQRAEILSPLGRISEAVSDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDFQQSLE 269
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A
Sbjct: 270 LNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAAT 329
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A
Sbjct: 330 ESFQRALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVA 389
Query: 632 IGEYREAV 639
+G + E +
Sbjct: 390 MGHFYEGI 397
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V+ ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 227 AVSDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 286
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + +AL N L
Sbjct: 287 HRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQRALLLNQNHVQTL 346
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G + + +A K +
Sbjct: 347 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGHFYEGIKAQTKVM 404
>gi|427737137|ref|YP_007056681.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
sp. PCC 7116]
gi|427372178|gb|AFY56134.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
sp. PCC 7116]
Length = 694
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 130/254 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A Y AI+ F+Q LK +P + RG AR+ ++ + AISD+T+A++ N
Sbjct: 402 NRGAAHSELKDYQEAINDFNQALKINPKLAKVYYNRGGARSELKDYQGAISDYTQALRIN 461
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG RA L + AI D ++AL+ P AD + RG V KD+ A+ D
Sbjct: 462 SKYANAYNSRGFTRAKLKDYQGAINDFNQALKINPKYADAYYRRGAVRGNLKDYQGAIND 521
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K+D + AY+ G+A + +Y+ A + + +AI+++ + A+ + +L
Sbjct: 522 FNQVIKIDPKYAHAYSNRGVARYELKDYQGAIQDYTQAIKINPKYANAYYNRGVARYELK 581
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A++ QV+ I +++ Y+ RG L ++ AI+D + + I P + Y R
Sbjct: 582 DYQGAIQDYTQVIKIHPKYAYGYNNRGNARRELKDYQGAIQDYTQVIKIHPKLAQAYYRR 641
Query: 626 ASCYHAIGEYREAV 639
+Y+ A+
Sbjct: 642 GFVRGKFKDYQGAI 655
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 119/224 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ Y AIS + Q L+ + Y A RG RA ++ + AI+DF +A++ N
Sbjct: 436 NRGGARSELKDYQGAISDYTQALRINSKYANAYNSRGFTRAKLKDYQGAINDFNQALKIN 495
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RRG R L + AI D ++ ++ +P A RG+ ++ KD+ A++D
Sbjct: 496 PKYADAYYRRGAVRGNLKDYQGAINDFNQVIKIDPKYAHAYSNRGVARYELKDYQGAIQD 555
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + +AY G+A + +Y+ A + + + I++ + + + ++L
Sbjct: 556 YTQAIKINPKYANAYYNRGVARYELKDYQGAIQDYTQVIKIHPKYAYGYNNRGNARRELK 615
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + A++ QV+ I + ++AY+ RG + ++ AI DL+
Sbjct: 616 DYQGAIQDYTQVIKIHPKLAQAYYRRGFVRGKFKDYQGAINDLN 659
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 131/259 (50%), Gaps = 2/259 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D+ L +G+ + + Y AI Q +K +P Y A RG AR+ ++ + AI+DF +A
Sbjct: 262 DYFL-KGVDKYKKKDYQGAIQDLTQAIKLNPKYAIAYNNRGVARSELKDYQEAINDFNQA 320
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK-FKDFN 500
++ NP EA RG AR+ L + AI D ++AL+ P A+ RG V + D+
Sbjct: 321 LKINPKLAEAHGGRGDARSNLKDYQGAIDDYNQALKINPKLAEAYLNRGTVRGRNLHDYQ 380
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D + +K++ + AY G A S + +Y++A +A++++ + + +
Sbjct: 381 GAINDFNQALKINPKLAEAYGNRGAAHSELKDYQEAINDFNQALKINPKLAKVYYNRGGA 440
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+L + + A+ Q L I+ +++ AY+ RG L ++ AI D + L I+P +
Sbjct: 441 RSELKDYQGAISDYTQALRINSKYANAYNSRGFTRAKLKDYQGAINDFNQALKINPKYAD 500
Query: 621 CLYLRASCYHAIGEYREAV 639
Y R + + +Y+ A+
Sbjct: 501 AYYRRGAVRGNLKDYQGAI 519
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 123/243 (50%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ F+Q LK +P EA RG A + ++ + AI+DF +A++ NP + + RG
Sbjct: 379 YQGAINDFNQALKINPKLAEAYGNRGAAHSELKDYQEAINDFNQALKINPKLAKVYYNRG 438
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR+ L + AI D ++AL A+ + RG K KD+ A+ D + +K++ +
Sbjct: 439 GARSELKDYQGAISDYTQALRINSKYANAYNSRGFTRAKLKDYQGAINDFNQALKINPKY 498
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY G ++ +Y+ A + I++D + A+ + +L + + A++ Q
Sbjct: 499 ADAYYRRGAVRGNLKDYQGAINDFNQVIKIDPKYAHAYSNRGVARYELKDYQGAIQDYTQ 558
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ I+ +++ AY+ RG+ + L ++ AI+D + + I P R + + +Y+
Sbjct: 559 AIKINPKYANAYYNRGVARYELKDYQGAIQDYTQVIKIHPKYAYGYNNRGNARRELKDYQ 618
Query: 637 EAV 639
A+
Sbjct: 619 GAI 621
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 187/466 (40%), Gaps = 81/466 (17%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++ ++AI+ L+ A +Y NR S+L+ ++ I D ++AL+++P L +A+
Sbjct: 279 AIQDLTQAIK-LNPKYAIAYN-----NRGVARSELKDYQEAINDFNQALKINPKLAEAHG 332
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
+G A S L K Y+ A+ D Q L++ L A +R ++ +
Sbjct: 333 GRGDARSNL-----------KDYQGAID---DYNQALKINPKLAEAYLNRGTVRGRNLHD 378
Query: 168 SMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDE 227
++ L N K++E N + S+ +D E + +
Sbjct: 379 YQGAINDFNQALKINPKLAEAYGNRGAA-----HSELKDYQEAINDFNQ----------- 422
Query: 228 AKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTH-ASRDASEINRQSSDDFDICNG 286
L IN KL +V N G+ K A D ++ R
Sbjct: 423 ------------ALKINPKLAKVYYNRGGARSELKDYQGAISDYTQALR----------- 459
Query: 287 PIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRS 346
+N ++ N KL ++ND N ++ + K +D+ R
Sbjct: 460 ------INSKYANAYNSRGFTRAKLKDYQGAINDFN-------QALKINPKYADAYYRRG 506
Query: 347 KLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQ 406
+ + N+ + V +I + + +RG+A+ Y AI + Q
Sbjct: 507 AVRGNLKDYQGAINDFNQ-----VIKIDPKYAHAYS---NRGVARYELKDYQGAIQDYTQ 558
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
+K +P Y A RG AR ++ + AI D+T+ I+ +P + RG AR L +
Sbjct: 559 AIKINPKYANAYYNRGVARYELKDYQGAIQDYTQVIKIHPKYAYGYNNRGNARRELKDYQ 618
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
AIQD ++ ++ P A + RG V KFKD+ A+ DL+ L
Sbjct: 619 GAIQDYTQVIKIHPKLAQAYYRRGFVRGKFKDYQGAINDLNIAANL 664
>gi|291569283|dbj|BAI91555.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 847
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 140/278 (50%), Gaps = 3/278 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +++ I+ ++ L+ RG+ +G Y +AI+ +++ ++ +P Y A R
Sbjct: 506 NYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYALAYNNR 565
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A Q EAAI+D+ AI+ NP+ A+ RG A + G AI D ++A+E PN
Sbjct: 566 GFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRSQGNYKAAIADYNRAIEINPN 625
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + RG + ++ AA+ D + ++++ +AY G A S G YK A +
Sbjct: 626 YHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYKAAIADYN 685
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI+++ N+ A+ + ++ N E A+ + + I+ ++ AY+ RGL G +
Sbjct: 686 RAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNY 745
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI D + + I+P+ R + + G Y A+
Sbjct: 746 EAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAI 783
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 3/278 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +++ I+ ++ L+ RG A +G Y +AI+ +++ ++ +P Y A R
Sbjct: 438 NYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNR 497
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A Q EAAI+D+ AI+ NP+ A+ RG G AI D ++A+E PN
Sbjct: 498 GFAHRRQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPN 557
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A + RG + + ++ AA+ D + ++++ AY G A S G YK A +
Sbjct: 558 YALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRSQGNYKAAIADYN 617
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI+++ N+ A+ + ++ N E A+ + + I+ + AY+ RG G +
Sbjct: 618 RAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNY 677
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
K AI D + + I+P+ R + + G Y A+
Sbjct: 678 KAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAI 715
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 138/277 (49%), Gaps = 3/277 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +++ I+ ++ L+ RG A +G Y +AI+ +++ ++ +P Y A R
Sbjct: 540 NYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNR 599
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A Q +AAI+D+ AI+ NP+ A+ RG A + G AI D ++A+E PN
Sbjct: 600 GFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPN 659
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + RG + ++ AA+ D + ++++ +AY G A S G Y+ A +
Sbjct: 660 YHNAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYN 719
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI+++ N+ A+ ++ N E A+ + + I+ + AY+ RG G +
Sbjct: 720 RAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNY 779
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ AI D + + I+P+ R Y +GE ++A
Sbjct: 780 EAAIADYNRAIEINPNYALAYKNRGDAYKVLGEKQKA 816
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 136/278 (48%), Gaps = 3/278 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +++ I+ ++ L+ RG A +G Y +AI+ +++ ++ +P Y A GR
Sbjct: 472 NYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNGR 531
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G Q EAAI+D+ AI+ NP+ A+ RG A G AI D ++A+E PN
Sbjct: 532 GLTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPN 591
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A + RG + ++ AA+ D + ++++ +AY G A S G Y+ A +
Sbjct: 592 YALAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYN 651
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI+++ N+ A+ + ++ N + A+ + + I+ + AY+ RG G +
Sbjct: 652 RAIEINPNYHNAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNY 711
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI D + + I+P+ R + G Y A+
Sbjct: 712 EAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAI 749
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 127/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ +G Y +AI+ +++ ++ +P Y A RG A Q EAAI+D+ AI+ N
Sbjct: 428 SRGLTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEIN 487
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A G AI D ++A+E PN A + RG+ + + ++ AA+ D
Sbjct: 488 PNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIAD 547
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY G A G Y+ A + +AI+++ N+ A+ + ++
Sbjct: 548 YNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRSQG 607
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N + A+ + + I+ + AY+ RG G ++ AI D + + I+P+ R
Sbjct: 608 NYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYHNAYNNR 667
Query: 626 ASCYHAIGEYREAV 639
+ + G Y+ A+
Sbjct: 668 GFAHRSQGNYKAAI 681
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 126/249 (50%), Gaps = 3/249 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +++ I+ ++ L+ RG A ++G Y +AI+ +++ ++ +P Y A R
Sbjct: 574 NYEAAIADYNRAIEINPNYALAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNR 633
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A Q EAAI+D+ AI+ NP+ A+ RG A + G AI D ++A+E PN
Sbjct: 634 GFAHRSQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYKAAIADYNRAIEINPN 693
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + RG + ++ AA+ D + ++++ AY GL G Y+ A +
Sbjct: 694 YHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIADYN 753
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI+++ N+ A+ + ++ N E A+ + + I+ ++ AY RG LG+
Sbjct: 754 RAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYALAYKNRGDAYKVLGEK 813
Query: 602 KKAIKDLSS 610
+KA D +
Sbjct: 814 QKAGSDWQT 822
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
T+ + R LE I+D T + RG G AI D ++A+E PN
Sbjct: 408 TSSQYNRPLEIDINDAT-----------VYYSRGLTHRRQGNYEAAIADYNRAIEINPNY 456
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A + RG + + ++ AA+ D + ++++ AY G A G Y+ A + +
Sbjct: 457 ALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNR 516
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI+++ N+ A+ ++ N E A+ + + I+ ++ AY+ RG G ++
Sbjct: 517 AIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYE 576
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AI D + + I+P+ R + + G Y+ A+
Sbjct: 577 AAIADYNRAIEINPNYALAYNNRGFAHRSQGNYKAAI 613
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +++ I+ ++ L+ RG+ +G Y +AI+ +++ ++ +P Y A R
Sbjct: 710 NYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYHNAYNNR 769
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
G A Q EAAI+D+ AI+ NP+ A+K RG A LGE +A D A
Sbjct: 770 GFAHRSQGNYEAAIADYNRAIEINPNYALAYKNRGDAYKVLGEKQKAGSDWQTA 823
>gi|167392256|ref|XP_001733493.1| tetratricopeptide repeat protein, tpr [Entamoeba dispar SAW760]
gi|165895951|gb|EDR23526.1| tetratricopeptide repeat protein, tpr, putative [Entamoeba dispar
SAW760]
Length = 454
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 103/187 (55%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+ I +D +++G VN GK AI+ FDQ+L+ P +GRG+A+A +L+ A+
Sbjct: 228 TNDIELDREIAKGYLYVNTGKLKEAITHFDQLLRNHPNLLAGYLGRGSAKAMLGDLQKAL 287
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+DF A++ + G+A+KRRGQ + ALG++ A++D +KA+E P D +RG
Sbjct: 288 TDFNLAVKKDNKCGDAYKRRGQVKLALGQTQSALEDFNKAIELTPEEGDCYRQRGSAYHA 347
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
F+ A ED+ +KL + + L L + +G ++ + +AI +++E +
Sbjct: 348 LGIFDKAAEDIKKSIKLIPGDATLLNELALCYNGMGLVDESINTYTRAINTKEDYVEPYI 407
Query: 556 HLTQFYQ 562
HL Q Y+
Sbjct: 408 HLGQLYR 414
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%)
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
+ Y G A + +G+ +KA A++ D +A+ Q L ++ ALE +
Sbjct: 268 AGYLGRGSAKAMLGDLQKALTDFNLAVKKDNKCGDAYKRRGQVKLALGQTQSALEDFNKA 327
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
+ + Y RG H LG KA +D+ + + P + L A CY+ +G E
Sbjct: 328 IELTPEEGDCYRQRGSAYHALGIFDKAAEDIKKSIKLIPGDATLLNELALCYNGMGLVDE 387
Query: 638 AV 639
++
Sbjct: 388 SI 389
>gi|67474444|ref|XP_652971.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
gi|56469881|gb|EAL47585.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
Length = 917
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 136/271 (50%), Gaps = 12/271 (4%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN + A+ F L + P A +GRGTA A E AI DFT
Sbjct: 206 IDKELAMGYLYVNNNRVKEAVDYFTVFLNKYPNVVGAFLGRGTAFAMLSNFEKAIQDFTS 265
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
AI+ +P G+A+KRRGQ A G+ E ++D +KA+E D +RG V K++
Sbjct: 266 AIKYDPKCGDAYKRRGQTLVACGKLYEGLEDFNKAIELSNGKDGDCYAQRGSVYQMLKNY 325
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
D V+ + + +++ +LGL +++G +A +A+ +A+Q+ +F+E + +L Q
Sbjct: 326 EKGRADFREAVRKNSMDFNSWNHLGLNNNALGLVAEAADAYARALQIKDDFIECYVNLAQ 385
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS---------- 609
++D N +++ + ++ + S +++ G+L G H AIK+ +
Sbjct: 386 LHKDAGNFQRSKDVFNKLFRMQPNHSNGHYICGVLYQQSGYHLAAIKEFTLAITNRNEPV 445
Query: 610 SGLGIDPSNI-ECLYLRASCYHAIGEYREAV 639
SG+ DP + E R A G++R AV
Sbjct: 446 SGIAKDPDRMCEAWRYRGVTRSASGQFRLAV 476
>gi|449705635|gb|EMD45644.1| tetratricopeptide repeatcontaining protein [Entamoeba histolytica
KU27]
Length = 917
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 136/271 (50%), Gaps = 12/271 (4%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN + A+ F L + P A +GRGTA A E AI DFT
Sbjct: 206 IDKELAMGYLYVNNNRVKEAVDYFTVFLNKYPNVVGAFLGRGTAFAMLSNFEKAIQDFTS 265
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
AI+ +P G+A+KRRGQ A G+ E ++D +KA+E D +RG V K++
Sbjct: 266 AIKYDPKCGDAYKRRGQTLVACGKLYEGLEDFNKAIELSNGKDGDCYAQRGSVYQMLKNY 325
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
D V+ + + +++ +LGL +++G +A +A+ +A+Q+ +F+E + +L Q
Sbjct: 326 EKGRADFREAVRKNSMDFNSWNHLGLNNNALGLVAEAADAYARALQIKDDFIECYVNLAQ 385
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS---------- 609
++D N +++ + ++ + S +++ G+L G H AIK+ +
Sbjct: 386 LHKDAGNFQRSKDVFNKLFRMQPNHSNGHYICGVLYQQSGYHLAAIKEFTLAITNRNEPV 445
Query: 610 SGLGIDPSNI-ECLYLRASCYHAIGEYREAV 639
SG+ DP + E R A G++R AV
Sbjct: 446 SGIAKDPDRMCEAWRYRGVTRSASGQFRLAV 476
>gi|427727407|ref|YP_007073644.1| hypothetical protein Nos7524_0123 [Nostoc sp. PCC 7524]
gi|427363326|gb|AFY46047.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
Length = 516
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 125/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N G AI+ F++ L P A RG ARA LEAA DFT++I N
Sbjct: 200 NRGLIYANLGDLKEAINDFNKSLVLQPKNFIAYYNRGIARAELGYLEAATEDFTKSISIN 259
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG LG+ +AI+D KA+ N A+ H + +D A+E
Sbjct: 260 PKFAEAYNNRGVICRKLGDIKKAIKDFKKAININSNYANAYHNLAFSYQQLRDMKGAIEA 319
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ V ++ + AY G+ + +G+ K A E +++ L+ N+ +++ + L
Sbjct: 320 YTQTVLINPNDAQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSFNYRGIVRNQLG 379
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ E A+E + LYI F +AY RG LG K AI+D S L I+P+ R
Sbjct: 380 DIEGAIEDFNRALYISPGFDEAYSNRGNTRKKLGDWKGAIEDYSQALRINPNFYIAYCNR 439
Query: 626 ASCYHAIGEYREAV 639
+ Y +GE+++A+
Sbjct: 440 GTAYQYLGEFQKAI 453
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 137/273 (50%), Gaps = 2/273 (0%)
Query: 369 CVTRISKSKSIS--VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
C + ++K ++ S + ++G+ G AI F+Q L Y EA RG A
Sbjct: 147 CYSHVNKHQNDSKLAEAFFNKGLYCAESGDLEEAIQNFNQALNIQSQYTEAYYNRGLIYA 206
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+L+ AI+DF +++ P A+ RG ARA LG A +D +K++ P A+
Sbjct: 207 NLGDLKEAINDFNKSLVLQPKNFIAYYNRGIARAELGYLEAATEDFTKSISINPKFAEAY 266
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ RG++ K D A++D + ++ +AY L + + + K A EA+ + + +
Sbjct: 267 NNRGVICRKLGDIKKAIKDFKKAININSNYANAYHNLAFSYQQLRDMKGAIEAYTQTVLI 326
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ N +A+ + DL +++ A+E Q L+++ ++K+++ RG++ + LG + AI+
Sbjct: 327 NPNDAQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSFNYRGIVRNQLGDIEGAIE 386
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + L I P E R + +G+++ A+
Sbjct: 387 DFNRALYISPGFDEAYSNRGNTRKKLGDWKGAI 419
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 125/240 (52%), Gaps = 9/240 (3%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-- 428
+KSIS++ + + RG+ G AI F + + + Y A A ++Q
Sbjct: 253 TKSISINPKFAEAYNNRGVICRKLGDIKKAIKDFKKAININSNYANAY--HNLAFSYQQL 310
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
R+++ AI +T+ + NP+ +A+ RG RA LG++ AI+D +++L PN A +
Sbjct: 311 RDMKGAIEAYTQTVLINPNDAQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSFNY 370
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RGIV + D A+ED + + + AY+ G +G++K A E + +A++++
Sbjct: 371 RGIVRNQLGDIEGAIEDFNRALYISPGFDEAYSNRGNTRKKLGDWKGAIEDYSQALRINP 430
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
NF A+ + YQ L +KA+E +Q + I+ F +AY+ RG + LG +AI DL
Sbjct: 431 NFYIAYCNRGTAYQYLGEFQKAIEDYEQAININCNFPEAYYNRGTIYKLLGNKVRAINDL 490
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 20/252 (7%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+++ G + AI ++Q ++ + +A RG A A LE AI D+ EAI N
Sbjct: 16 RGMSRAKLGDFEGAIKDYEQAIRINSNLAQAYYNRGMAFAKLGNLEDAIEDYDEAIYINE 75
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA+ RG RA L + EA++D ++A++ P A+ + R I D AV D
Sbjct: 76 DFAEAYFMRGNLRAGLEKFSEALEDYNEAIDINPYFAEAYYCRSIARSYLGDVEGAVNDF 135
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + +K++ S Y+ H+ Q D EA+ + + + +
Sbjct: 136 NQYI-FNKDDSSCYS------------------HVNKHQNDSKLAEAFFNKGLYCAESGD 176
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A++ Q L I ++++AY+ RGL+ LG K+AI D + L + P N Y R
Sbjct: 177 LEEAIQNFNQALNIQSQYTEAYYNRGLIYANLGDLKEAINDFNKSLVLQPKNFIAYYNRG 236
Query: 627 SCYHAIGEYREA 638
+G Y EA
Sbjct: 237 IARAELG-YLEA 247
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 125/303 (41%), Gaps = 49/303 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G AI +D+ + + + EA RG RA + A+ D+ EAI N
Sbjct: 49 NRGMAFAKLGNLEDAIEDYDEAIYINEDFAEAYFMRGNLRAGLEKFSEALEDYNEAIDIN 108
Query: 446 PSAGEAWKRRGQARAALGES---------------------------------------- 465
P EA+ R AR+ LG+
Sbjct: 109 PYFAEAYYCRSIARSYLGDVEGAVNDFNQYIFNKDDSSCYSHVNKHQNDSKLAEAFFNKG 168
Query: 466 ---------VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
EAIQ+ ++AL + + + RG++ D A+ D + + L +N
Sbjct: 169 LYCAESGDLEEAIQNFNQALNIQSQYTEAYYNRGLIYANLGDLKEAINDFNKSLVLQPKN 228
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY G+A + +G + A E K+I ++ F EA+ + + L + +KA++ ++
Sbjct: 229 FIAYYNRGIARAELGYLEAATEDFTKSISINPKFAEAYNNRGVICRKLGDIKKAIKDFKK 288
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ I+ ++ AYH L K AI+ + + I+P++ + Y R +G+ +
Sbjct: 289 AININSNYANAYHNLAFSYQQLRDMKGAIEAYTQTVLINPNDAQAYYNRGIVRADLGDTK 348
Query: 637 EAV 639
A+
Sbjct: 349 GAI 351
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 39/239 (16%)
Query: 336 NKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEG 395
N +S+ + L+F + L++ + + + + +++ +RGI + + G
Sbjct: 291 NINSNYANAYHNLAFSYQQLRDMKGAIEAYTQTVLINPNDAQAY-----YNRGIVRADLG 345
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
AI F+Q L +P Y ++ RG R ++E AI DF A+ +P EA+ R
Sbjct: 346 DTKGAIEDFNQSLHLNPNYAKSFNYRGIVRNQLGDIEGAIEDFNRALYISPGFDEAYSNR 405
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G R LG+ AI+D S+AL PN RG
Sbjct: 406 GNTRKKLGDWKGAIEDYSQALRINPNFYIAYCNRG------------------------- 440
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+AY YL GE++KA E + +AI ++ NF EA+ + Y+ L N +A+ L
Sbjct: 441 --TAYQYL-------GEFQKAIEDYEQAININCNFPEAYYNRGTIYKLLGNKVRAINDL 490
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 67/116 (57%)
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G++ + +G+++ A + + +AI+++ N +A+ + + L N E A+E + +YI++
Sbjct: 17 GMSRAKLGDFEGAIKDYEQAIRINSNLAQAYYNRGMAFAKLGNLEDAIEDYDEAIYINED 76
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
F++AY +RG L GL + +A++D + + I+P E Y R+ +G+ AV
Sbjct: 77 FAEAYFMRGNLRAGLEKFSEALEDYNEAIDINPYFAEAYYCRSIARSYLGDVEGAV 132
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N AD +ERG+ K DF A++D ++++ AY G+A + +G + A E +
Sbjct: 8 NDADEFNERGMSRAKLGDFEGAIKDYEQAIRINSNLAQAYYNRGMAFAKLGNLEDAIEDY 67
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI ++ +F EA+ L +ALE + + I+ F++AY+ R + LG
Sbjct: 68 DEAIYINEDFAEAYFMRGNLRAGLEKFSEALEDYNEAIDINPYFAEAYYCRSIARSYLGD 127
Query: 601 HKKAIKDLS 609
+ A+ D +
Sbjct: 128 VEGAVNDFN 136
>gi|407042897|gb|EKE41609.1| TPR repeat protein [Entamoeba nuttalli P19]
Length = 915
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 136/271 (50%), Gaps = 12/271 (4%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+ G VN + A+ F L + P A +GRGTA A E AI DFT
Sbjct: 204 IDKELAMGYLYVNNNRVKEAVDYFTVFLNKYPNVVGAFLGRGTAFAMLSNFEKAIQDFTS 263
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
AI+ +P G+A+KRRGQ A G+ E ++D +KA+E D +RG V K++
Sbjct: 264 AIKYDPKCGDAYKRRGQTLVACGKLYEGLEDFNKAIELSNGKDGDCYAQRGSVYQMLKNY 323
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
D V+ + + +++ +LGL +++G +A +A+ +A+Q+ +F+E + +L Q
Sbjct: 324 EKGRADFREAVRKNSMDFNSWNHLGLNNNALGLVAEAADAYARALQIKDDFIECYVNLAQ 383
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS---------- 609
++D N +++ + ++ + S +++ G+L G H AIK+ +
Sbjct: 384 LHKDAGNFQRSKDVFNKLFRMQPNHSNGHYICGVLYQQSGYHLAAIKEFTLAITNRNEPI 443
Query: 610 SGLGIDPSNI-ECLYLRASCYHAIGEYREAV 639
SG+ DP + E R A G++R AV
Sbjct: 444 SGIAKDPERMCEAWRYRGVTRSASGQFRLAV 474
>gi|158334744|ref|YP_001515916.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris marina MBIC11017]
gi|158304985|gb|ABW26602.1| serine/threonin protein kinase with TRP repeats [Acaryochloris
marina MBIC11017]
Length = 670
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 146/286 (51%), Gaps = 6/286 (2%)
Query: 333 ISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVD---FRLSRGI 389
I+ SS T S +F + + + +RN + + S++ +S D L RG
Sbjct: 328 IATRMSSSETSGESATAF---IRRGDAKYNRRNYEDAIADYSEAIRLSPDNAQAYLGRGN 384
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A+ +Y A+ +D+ LK DP Y A GRG + +++ E AI D+ +AIQS+P
Sbjct: 385 ARYALEEYPEALIDYDEALKHDPDYVYAFNGRGNVKFARKDFEGAIQDYNQAIQSDPQFA 444
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
A+ RG ++AL E AI+D S+A+ P RG+ ++ A+ED S
Sbjct: 445 LAFYNRGNVKSALKEHRAAIEDFSQAIRLNPQYEPAYLLRGVSKAALTNYAGAIEDYSET 504
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++L+ +N +A+ G+A +GE ++A + +AI+L+ A+ + + L ++E
Sbjct: 505 IRLNPDNDNAFNSRGVARYKLGESRQAIKDFTEAIRLNPKNSFAYCNRGESKLKLKDAEG 564
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
A++ + + +D + S AY RG H L ++K AI+D + L I+
Sbjct: 565 AIKDCTETIRLDPQSSFAYSARGKAHHALKRYKAAIEDYTQALTIN 610
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A+ G+ AI F + ++ +P A RG ++ ++ E AI D TE I+ +
Sbjct: 517 SRGVARYKLGESRQAIKDFTEAIRLNPKNSFAYCNRGESKLKLKDAEGAIKDCTETIRLD 576
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP------NSADILHERGIVNFKFKDF 499
P + A+ RG+A AL AI+D ++AL + AD + RG K D
Sbjct: 577 PQSSFAYSARGKAHHALKRYKAAIEDYTQALTINSGWGNSDSPADSYYNRGSAKSKLNDI 636
Query: 500 NAAVEDL 506
AVEDL
Sbjct: 637 AGAVEDL 643
>gi|254414719|ref|ZP_05028484.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196178567|gb|EDX73566.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 942
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 121/255 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G G++ AI+ +D+ L+ P A RGTA E E AI+ F +A+Q
Sbjct: 18 FNQGCEYFQLGQFEQAIASYDKALQIKPDDHNAWYNRGTALLNIGEYEEAIASFEKALQF 77
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + EAW RG A A LGE EAI KA++ +P+S + RG+ K ++ A+
Sbjct: 78 KPDSYEAWLNRGLALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLALAKLGEYEEAIA 137
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++ + + GL L +GEY++A ++ KA+Q + E W + DL
Sbjct: 138 SYDKAIQIKPDKHETWHNWGLVLDDLGEYEEAIASYDKALQCKPDLHETWHNRGAALADL 197
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
EKA+ + L K +H RG L LG+++KAI L I P E
Sbjct: 198 REYEKAIASYDKALQFKPDLHKTWHNRGKALGDLGEYEKAIVSYDKALQIKPDKHEAWLS 257
Query: 625 RASCYHAIGEYREAV 639
R +GEY +A+
Sbjct: 258 RGLVLAELGEYEKAI 272
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 118/231 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +N G+Y AI+ F++ L+ P EA + RG A A E E AI+ F +AIQ
Sbjct: 53 NRGTALLNIGEYEEAIASFEKALQFKPDSYEAWLNRGLALAKLGEYEEAITFFDKAIQIK 112
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + EAW RG A A LGE EAI KA++ +P+ + H G+V ++ A+
Sbjct: 113 PDSYEAWLNRGLALAKLGEYEEAIASYDKAIQIKPDKHETWHNWGLVLDDLGEYEEAIAS 172
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + + G AL+ + EY+KA ++ KA+Q + + W + + DL
Sbjct: 173 YDKALQCKPDLHETWHNRGAALADLREYEKAIASYDKALQFKPDLHKTWHNRGKALGDLG 232
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
EKA+ + L I +A+ RGL+L LG+++KAI L P
Sbjct: 233 EYEKAIVSYDKALQIKPDKHEAWLSRGLVLAELGEYEKAIASYDKALQFKP 283
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 104/211 (49%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E AI+ + +A+Q P AW RG A +GE EAI KAL+F+P+S + R
Sbjct: 29 QFEQAIASYDKALQIKPDDHNAWYNRGTALLNIGEYEEAIASFEKALQFKPDSYEAWLNR 88
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ K ++ A+ +++ ++ A+ GLAL+ +GEY++A ++ KAIQ+ +
Sbjct: 89 GLALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLALAKLGEYEEAIASYDKAIQIKPD 148
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E W + DL E+A+ + L + +H RG L L +++KAI
Sbjct: 149 KHETWHNWGLVLDDLGEYEEAIASYDKALQCKPDLHETWHNRGAALADLREYEKAIASYD 208
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L P + + R +GEY +A++
Sbjct: 209 KALQFKPDLHKTWHNRGKALGDLGEYEKAIV 239
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 103/217 (47%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K S + L+RG+A G+Y AI+ FD+ ++ P EA + RG A A E E AI+
Sbjct: 78 KPDSYEAWLNRGLALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLALAKLGEYEEAIA 137
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ +AIQ P E W G LGE EAI KAL+ +P+ + H RG
Sbjct: 138 SYDKAIQIKPDKHETWHNWGLVLDDLGEYEEAIASYDKALQCKPDLHETWHNRGAALADL 197
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+++ A+ ++ + + G AL +GEY+KA ++ KA+Q+ + EAW
Sbjct: 198 REYEKAIASYDKALQFKPDLHKTWHNRGKALGDLGEYEKAIVSYDKALQIKPDKHEAWLS 257
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+L EKA+ + L F A+ RG+
Sbjct: 258 RGLVLAELGEYEKAIASYDKALQFKPDFHDAWLNRGI 294
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + +Y AI+ +D+ L+ P + RG A E E AI + +A+Q
Sbjct: 189 NRGAALADLREYEKAIASYDKALQFKPDLHKTWHNRGKALGDLGEYEKAIVSYDKALQIK 248
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
P EAW RG A LGE +AI KAL+F+P+ D RGI + +N
Sbjct: 249 PDKHEAWLSRGLVLAELGEYEKAIASYDKALQFKPDFHDAWLNRGIAAGNSRHYNP 304
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y Q N+ Y QL + I DKALQ+ P A+ +G A +G EEA++ +
Sbjct: 12 YLAQQWFNQGCEYFQLGQFEQAIASYDKALQIKPDDHNAWYNRGTALLNIGEYEEAIASF 71
Query: 127 EKG-------YEHALHQSADLKQFLELEELLT 151
EK YE L++ L + E EE +T
Sbjct: 72 EKALQFKPDSYEAWLNRGLALAKLGEYEEAIT 103
>gi|296126379|ref|YP_003633631.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296018195|gb|ADG71432.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 391
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 142/300 (47%), Gaps = 39/300 (13%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF---QRELEA 433
K +SV L N+ Y +AI F + +K DP E RG A+A ++ ++
Sbjct: 4 KDVSV--FLKNAYNAFNDKDYKTAIDYFSEAIKLDPNSAETYYNRGNAKANLDDKKLYKS 61
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI D++ AI N A+ RG + G + EAI+D KA+E N + + RG
Sbjct: 62 AIEDYSWAINLNDKFAAAYYNRGILNRSFGNNKEAIEDFDKAIELNYNLEEAYYVRGNTK 121
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ-------- 545
KD+ ++ED + V++ AY + L+ ++IG YK+A +A+ KAI+
Sbjct: 122 ASLKDYKGSIEDYNKAVEVYPHFSDAYYNMALSHNAIGNYKEAIKAYDKAIEYNSHFADA 181
Query: 546 --------------------------LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
L+RNF+EA+ + ++ N + ++E +++
Sbjct: 182 YNNRGNVKEKLGYYNEAIDDYTNALHLNRNFIEAYFNRANAKFNIKNYKGSIEDFDEIIK 241
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
ID +SKAY+ RG++ + ++K AI+D + ++P + Y +A + +G Y EAV
Sbjct: 242 IDPTYSKAYYNRGIVKTSMEEYKDAIEDFDKVIELEPKFPDAYYNKAVAINHLGIYDEAV 301
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+R A+ N Y +I FD+I+K DP Y +A RG + E + AI DF + I+
Sbjct: 217 FNRANAKFNIKNYKGSIEDFDEIIKIDPTYSKAYYNRGIVKTSMEEYKDAIEDFDKVIEL 276
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
P +A+ + A LG EA++ KA+E PN A+ R I
Sbjct: 277 EPKFPDAYYNKAVAINHLGIYDEAVEFYDKAIELNPNYAESYCNRAI 323
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 34/169 (20%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G Y AI + L + + EA R A+ + + +I DF E I+ +
Sbjct: 184 NRGNVKEKLGYYNEAIDDYTNALHLNRNFIEAYFNRANAKFNIKNYKGSIEDFDEIIKID 243
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG + ++ E +AI+D K +E EP KF D
Sbjct: 244 PTYSKAYYNRGIVKTSMEEYKDAIEDFDKVIELEP--------------KFPD------- 282
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
AY +A++ +G Y +A E + KAI+L+ N+ E++
Sbjct: 283 -------------AYYNKAVAINHLGIYDEAVEFYDKAIELNPNYAESY 318
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
S+ ++ + I+I D +++Y NR + +E +K I D DK ++L+P AY
Sbjct: 232 SIEDFDEIIKI-DPTYSKAY-----YNRGIVKTSMEEYKDAIEDFDKVIELEPKFPDAYY 285
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
K A + LG +EA+ ++K E
Sbjct: 286 NKAVAINHLGIYDEAVEFYDKAIE 309
>gi|440682547|ref|YP_007157342.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428679666|gb|AFZ58432.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 1409
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 134/257 (52%), Gaps = 3/257 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+ + G+Y A++ FD+ L+ P Y E + RG A + E E A++ + +A++
Sbjct: 182 LIRGVTLYHLGEYEQAVAFFDKALEFKPDYHEVWLIRGGALDYLGEYEQAVASYDKALEI 241
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW +RG A A LGE +A+ KALE +P+ ++ + RG++ ++ AV
Sbjct: 242 KPDYHEAWCKRGVALANLGEYEQAVASYDKALEIKPDYHEVGNNRGLLLVHLGEYQKAVA 301
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++ + A+ Y G+AL +GEY++A ++ KA+++ + +A + +L
Sbjct: 302 SFDKALEIKPNDYDAWHYRGVALGYLGEYEQAVASYNKALEIKPEYHQALSNWGVTLGNL 361
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+KA+ + L I +A+ RG+ L LG+++KA+ L I P++ +
Sbjct: 362 GEYQKAVASFDKALEIKPDDHEAWCKRGVTLVHLGEYQKAVASFDKALEIKPNDYDAWCN 421
Query: 625 RAS--CYHAIGEYREAV 639
R C H +Y +AV
Sbjct: 422 RGVVLCDH-FRQYEQAV 437
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 14/262 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G Q N G +A AI+ FD+ L+ P Y E + RG E E A++ F +A++
Sbjct: 148 FNKGYEQYNAGDFAGAIASFDKALEFKPDYYEVWLIRGVTLYHLGEYEQAVAFFDKALEF 207
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P E W RG A LGE +A+ KALE +P+ + +RG+ ++ AV
Sbjct: 208 KPDYHEVWLIRGGALDYLGEYEQAVASYDKALEIKPDYHEAWCKRGVALANLGEYEQAVA 267
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
+++ + GL L +GEY+KA + KA+++ N +AW G+L
Sbjct: 268 SYDKALEIKPDYHEVGNNRGLLLVHLGEYQKAVASFDKALEIKPNDYDAWHYRGVALGYL 327
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++ Q +A+ KALE I + +A G+ L LG+++KA+ L I P
Sbjct: 328 GEYEQAVASYNKALE-------IKPEYHQALSNWGVTLGNLGEYQKAVASFDKALEIKPD 380
Query: 618 NIECLYLRASCYHAIGEYREAV 639
+ E R +GEY++AV
Sbjct: 381 DHEAWCKRGVTLVHLGEYQKAV 402
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 122/255 (47%), Gaps = 1/255 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G+Y A++ +D+ LK P +A RG + E E A++ + + ++
Sbjct: 456 NRGVALGNLGEYEQAVASYDKALKIKPDDYQACFNRGVTLGYLGEYEQAVASYDKVLEFK 515
Query: 446 PSAGEAWKRRGQARA-ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AW RG LG +A+ +KALE +P+ D RG+ ++ AV
Sbjct: 516 PDYYDAWYNRGILLCDNLGRYEQAVASFNKALEIKPDYYDAWCNRGVALDHLGEYEQAVA 575
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++ ++ + G+ L +GEY++A ++ KA++ ++ +AW L
Sbjct: 576 SYDKALEIKPDDHETWCKRGVTLDHLGEYEQAVASYDKALKFKPDYHKAWYGRGVTLDHL 635
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+E+A+ + L + + ++ RG L+ LG++++A+ L I P +
Sbjct: 636 GENEQAVASYNKALEFKPDYHEVWNSRGNALNNLGEYEQAVASYDKALEIKPDYYDAWCN 695
Query: 625 RASCYHAIGEYREAV 639
R +GEY +AV
Sbjct: 696 RGVALDHLGEYEQAV 710
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 1/256 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR-ELEAAISDFTEAIQ 443
+RG+ G+Y A++ +D++L+ P Y +A RG E A++ F +A++
Sbjct: 489 FNRGVTLGYLGEYEQAVASYDKVLEFKPDYYDAWYNRGILLCDNLGRYEQAVASFNKALE 548
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P +AW RG A LGE +A+ KALE +P+ + +RG+ ++ AV
Sbjct: 549 IKPDYYDAWCNRGVALDHLGEYEQAVASYDKALEIKPDDHETWCKRGVTLDHLGEYEQAV 608
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+K + A+ G+ L +GE ++A ++ KA++ ++ E W +
Sbjct: 609 ASYDKALKFKPDYHKAWYGRGVTLDHLGENEQAVASYNKALEFKPDYHEVWNSRGNALNN 668
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L E+A+ + L I + A+ RG+ L LG++++A+ L P E
Sbjct: 669 LGEYEQAVASYDKALEIKPDYYDAWCNRGVALDHLGEYEQAVTSYDKALEFKPDKYEAWC 728
Query: 624 LRASCYHAIGEYREAV 639
R +GEY +AV
Sbjct: 729 NRGVVLCDLGEYEQAV 744
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 36/289 (12%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQSN 445
RG+ V+ G+Y A++ FD+ L+ P +A RG R+ E A++ + +A+Q
Sbjct: 388 RGVTLVHLGEYQKAVASFDKALEIKPNDYDAWCNRGVVLCDHFRQYEQAVASYDKALQIK 447
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LGE +A+ KAL+ +P+ RG+ ++ AV
Sbjct: 448 PDKYEAWNNRGVALGNLGEYEQAVASYDKALKIKPDDYQACFNRGVTLGYLGEYEQAVAS 507
Query: 506 LSACVKLDKENKSAYTYLGLAL-SSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
++ + A+ G+ L ++G Y++A + KA+++ ++ +AW HL
Sbjct: 508 YDKVLEFKPDYYDAWYNRGILLCDNLGRYEQAVASFNKALEIKPDYYDAWCNRGVALDHL 567
Query: 558 TQFYQDLANSEKALE---------CLQQV------------------LYIDKRFSKAYHL 590
++ Q +A+ +KALE C + V L + KA++
Sbjct: 568 GEYEQAVASYDKALEIKPDDHETWCKRGVTLDHLGEYEQAVASYDKALKFKPDYHKAWYG 627
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG+ L LG++++A+ + L P E R + + +GEY +AV
Sbjct: 628 RGVTLDHLGENEQAVASYNKALEFKPDYHEVWNSRGNALNNLGEYEQAV 676
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 127/253 (50%), Gaps = 15/253 (5%)
Query: 372 RISKSKSISVDFRLSRGIAQV-NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
++ + K D +RGI N G+Y A++ F++ L+ P Y +A RG A E
Sbjct: 510 KVLEFKPDYYDAWYNRGILLCDNLGRYEQAVASFNKALEIKPDYYDAWCNRGVALDHLGE 569
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E A++ + +A++ P E W +RG LGE +A+ KAL+F+P+ + RG
Sbjct: 570 YEQAVASYDKALEIKPDDHETWCKRGVTLDHLGEYEQAVASYDKALKFKPDYHKAWYGRG 629
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + AV + ++ + + G AL+++GEY++A ++ KA+++ ++
Sbjct: 630 VTLDHLGENEQAVASYNKALEFKPDYHEVWNSRGNALNNLGEYEQAVASYDKALEIKPDY 689
Query: 551 LEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
+AW HL ++ Q + + +KALE DK +A+ RG++L LG++++
Sbjct: 690 YDAWCNRGVALDHLGEYEQAVTSYDKALE-----FKPDKY--EAWCNRGVVLCDLGEYEQ 742
Query: 604 AIKDLSSGLGIDP 616
A+ L I P
Sbjct: 743 AVASYDKALEIKP 755
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%)
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
TE +S + W +G + G+ AI KALEF+P+ ++ RG+ + +
Sbjct: 134 TEEDESATDKAKVWFNKGYEQYNAGDFAGAIASFDKALEFKPDYYEVWLIRGVTLYHLGE 193
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ AV ++ + + G AL +GEY++A ++ KA+++ ++ EAW
Sbjct: 194 YEQAVAFFDKALEFKPDYHEVWLIRGGALDYLGEYEQAVASYDKALEIKPDYHEAWCKRG 253
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+L E+A+ + L I + + + RGLLL LG+++KA+ L I P++
Sbjct: 254 VALANLGEYEQAVASYDKALEIKPDYHEVGNNRGLLLVHLGEYQKAVASFDKALEIKPND 313
Query: 619 IECLYLRASCYHAIGEYREAV 639
+ + R +GEY +AV
Sbjct: 314 YDAWHYRGVALGYLGEYEQAV 334
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 3/228 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V +K+ I D+ +RG+A + G+Y A++ +D+ L+ P E RG
Sbjct: 539 AVASFNKALEIKPDYYDAWCNRGVALDHLGEYEQAVASYDKALEIKPDDHETWCKRGVTL 598
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E E A++ + +A++ P +AW RG LGE+ +A+ +KALEF+P+ ++
Sbjct: 599 DHLGEYEQAVASYDKALKFKPDYHKAWYGRGVTLDHLGENEQAVASYNKALEFKPDYHEV 658
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG ++ AV +++ + A+ G+AL +GEY++A ++ KA++
Sbjct: 659 WNSRGNALNNLGEYEQAVASYDKALEIKPDYYDAWCNRGVALDHLGEYEQAVTSYDKALE 718
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ EAW + DL E+A+ + L I + + RG+
Sbjct: 719 FKPDKYEAWCNRGVVLCDLGEYEQAVASYDKALEIKPDLHEVWINRGI 766
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+ + G+ A++ +++ L+ P Y E RG A E E A++ + +A++
Sbjct: 627 GRGVTLDHLGENEQAVASYNKALEFKPDYHEVWNSRGNALNNLGEYEQAVASYDKALEIK 686
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LGE +A+ KALEF+P+ + RG+V ++ AV
Sbjct: 687 PDYYDAWCNRGVALDHLGEYEQAVTSYDKALEFKPDKYEAWCNRGVVLCDLGEYEQAVAS 746
Query: 506 LSACVKLDKENKSAYTYLGLA 526
+++ + + G+A
Sbjct: 747 YDKALEIKPDLHEVWINRGIA 767
>gi|359461156|ref|ZP_09249719.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris sp. CCMEE 5410]
Length = 670
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 124/231 (53%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A+ +Y A+ +D+ LK DP Y A GRG + +++ E AI D+ +AIQS
Sbjct: 380 LGRGNARYALEEYPEALIDYDEALKHDPDYVYAFNGRGNVKFARKDFEGAIQDYNQAIQS 439
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG ++AL E AI+D S+A+ P +RG+ ++ A+E
Sbjct: 440 DPRFALAFYNRGNVKSALKEHRAAIEDFSQAIRLNPQYEPAYLQRGVAKAALTNYAGAIE 499
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S ++L+ N SA+ G+A +GE ++A + +AI+L+ A+ + + L
Sbjct: 500 DYSETLRLNPGNDSAFNNRGVARYKLGESRQAIKDFTEAIRLNPQNSFAYCNRGESKLKL 559
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
++E A++ + + +D + S AY RG H L ++K AI+D + L I+
Sbjct: 560 KDAEGAIKDCSETIRLDPQSSFAYSARGKANHALKRYKAAIEDYTQALTIN 610
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 65/162 (40%), Gaps = 40/162 (24%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+A+ YA AI + + L+ +P A RG AR E AI DFTEAI+
Sbjct: 482 LQRGVAKAALTNYAGAIEDYSETLRLNPGNDSAFNNRGVARYKLGESRQAIKDFTEAIRL 541
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS---------------------- 482
NP A+ RG+++ L ++ AI+D S+ + +P S
Sbjct: 542 NPQNSFAYCNRGESKLKLKDAEGAIKDCSETIRLDPQSSFAYSARGKANHALKRYKAAIE 601
Query: 483 ------------------ADILHERGIVNFKFKDFNAAVEDL 506
AD + RG K D AVEDL
Sbjct: 602 DYTQALTINSGWGNSDSPADSYYNRGSAKSKLNDIAGAVEDL 643
>gi|225620560|ref|YP_002721817.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215379|gb|ACN84113.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 257
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 118/212 (55%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+R+ + AI F + I+ P+ A+ RG ++ LG+ EAI+D KA+E PN D +
Sbjct: 16 ERKYKEAIESFDKVIELAPNNSNAYYNRGVSKENLGQYKEAIKDYDKAIELNPNDIDFYN 75
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+RGI + + A++D ++L+ + +Y G+A ++G+Y+++ + + KAI+L+
Sbjct: 76 DRGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQYEESIKDYDKAIELN 135
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
N+ A+ + + L E+A++ + + +D S AY+ RGL LGQ+K+AIKD
Sbjct: 136 HNYSNAYNNRGIAKKYLGQYEEAIKDYDKTIELDPNDSNAYNNRGLAKGNLGQYKEAIKD 195
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++PS + R +G+Y++A+
Sbjct: 196 FDKSIELNPSYSDVYNNRGVSKENLGQYKDAL 227
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 124/235 (52%), Gaps = 14/235 (5%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ E KY AI FD++++ P A RG ++ + + AI D+ +AI+ NP+
Sbjct: 10 GLNYFKERKYKEAIESFDKVIELAPNNSNAYYNRGVSKENLGQYKEAIKDYDKAIELNPN 69
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + RG A+ LG+ EAI+D KA+E PN +D + RGI + +++D
Sbjct: 70 DIDFYNDRGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQYEESIKDYD 129
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQF 560
++L+ +AY G+A +G+Y++A + + K I+LD N A+ G+L Q+
Sbjct: 130 KAIELNHNYSNAYNNRGIAKKYLGQYEEAIKDYDKTIELDPNDSNAYNNRGLAKGNLGQY 189
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ + + +K++E ++ +S Y+ RG+ LGQ+K A+KD L +D
Sbjct: 190 KEAIKDFDKSIE-------LNPSYSDVYNNRGVSKENLGQYKDALKDYKKALKLD 237
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 93/167 (55%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+DF RGIA+ N G+Y AI +D+ ++ +P ++ RG A+ + E +I D+ +
Sbjct: 71 IDFYNDRGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQYEESIKDYDK 130
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ N + A+ RG A+ LG+ EAI+D K +E +PN ++ + RG+ +
Sbjct: 131 AIELNHNYSNAYNNRGIAKKYLGQYEEAIKDYDKTIELDPNDSNAYNNRGLAKGNLGQYK 190
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
A++D ++L+ Y G++ ++G+YK A + + KA++LD
Sbjct: 191 EAIKDFDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYKKALKLD 237
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 84/158 (53%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
S++ +E G+ FK + + A+E ++L N +AY G++ ++G+YK+A + +
Sbjct: 2 SSEQYYEEGLNYFKERKYKEAIESFDKVIELAPNNSNAYYNRGVSKENLGQYKEAIKDYD 61
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+L+ N ++ + +L E+A++ + + ++ S +Y+ RG+ LGQ+
Sbjct: 62 KAIELNPNDIDFYNDRGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQY 121
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+++IKD + ++ + R +G+Y EA+
Sbjct: 122 EESIKDYDKAIELNHNYSNAYNNRGIAKKYLGQYEEAI 159
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Query: 9 SRYRLNKTHKTICEIDELVRV-----DSVMASAITARIELAKLC-SLRNWSKAIRILDSL 62
++Y L + + I + D+ + + DS I A+ L + S++++ KAI L+
Sbjct: 80 AKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGI-AKKNLGQYEESIKDYDKAIE-LNHN 137
Query: 63 LAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
+ +Y NR L ++ I+D DK ++LDP AY +G A LG+ +EA
Sbjct: 138 YSNAY-----NNRGIAKKYLGQYEEAIKDYDKTIELDPNDSNAYNNRGLAKGNLGQYKEA 192
Query: 123 LSVWEK 128
+ ++K
Sbjct: 193 IKDFDK 198
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 50 RNWSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYIL 108
R + +AI D ++ + + NR L +K I+D DKA++L+P + Y
Sbjct: 17 RKYKEAIESFDKVIELAPNNSNAYYNRGVSKENLGQYKEAIKDYDKAIELNPNDIDFYND 76
Query: 109 KGCAFSALGRKEEALSVWEKGYE 131
+G A LG+ EEA+ ++K E
Sbjct: 77 RGIAKYNLGQYEEAIKDYDKAIE 99
>gi|218438344|ref|YP_002376673.1| hypothetical protein PCC7424_1361 [Cyanothece sp. PCC 7424]
gi|218171072|gb|ACK69805.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 1276
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 128/253 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A N +Y A +DQ +K +P Y EA +G A E A + +AI+ NP
Sbjct: 364 RGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNP 423
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +AW RG A L EA Q KA++ PN A+ + +G+ K + + A++
Sbjct: 424 NHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSY 483
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+KL+ A+ G+AL + Y++A +++ +AI+L+ N+ EAW + +L
Sbjct: 484 DQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNRGFALGNLEC 543
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++A + + + ++ ++A++ RG L L ++++A++ + ++P+ E L+ R
Sbjct: 544 YQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQSYDKAIQLNPNYAEALFNRG 603
Query: 627 SCYHAIGEYREAV 639
+ Y EA
Sbjct: 604 VALERLERYEEAF 616
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 130/255 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A VN +Y A+ +++ LK +P Y EA RG A + A+ F +A +
Sbjct: 226 FNRGVALVNLERYQEALQSYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKAREL 285
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ E+W RG A L EA Q +A++ N A + RG K + + A +
Sbjct: 286 NPNNAESWNNRGVALEKLERYQEAFQSYDQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQ 345
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+KL+ A+ Y GLAL ++ Y++A +++ +AI+L+ N+ EAW + L
Sbjct: 346 SFDQAIKLNPNYAEAWNYRGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGML 405
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+A + Q + ++ ++A++ RG+ L L ++++A + + ++P++ E Y
Sbjct: 406 ERYEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYN 465
Query: 625 RASCYHAIGEYREAV 639
+ + Y+EA+
Sbjct: 466 QGVALGKLERYQEAL 480
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 123/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +Y A+ FD+ L+ +P Y EAL RG A + A + +A++ N
Sbjct: 125 NRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELN 184
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW RG A L EA+ KALE PN+A++ RG+ + + A++
Sbjct: 185 PNNAVAWNYRGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQS 244
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KL+ A+ Y G+AL S+ Y++A EA KA +L+ N E+W + + L
Sbjct: 245 YEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRGVALEKLE 304
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A + Q + ++ ++A++ RG L L ++++A + + ++P+ E R
Sbjct: 305 RYQEAFQSYDQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLNPNYAEAWNYR 364
Query: 626 ASCYHAIGEYREAV 639
+ Y EA
Sbjct: 365 GLALGNLERYEEAF 378
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 131/253 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A ++ GKY A+S FD+ L+ +P Y EAL RG + A+ F +A++ NP
Sbjct: 92 RGVALLHLGKYEEALSTFDKALELNPNYAEALSNRGFVLGKLERYQEALPTFDKALELNP 151
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA RG A L EA Q KALE PN+A + RG+ K + + A+
Sbjct: 152 NYAEALFNRGVALERLERYQEAFQSYDKALELNPNNAVAWNYRGVALGKLERYQEALPTF 211
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ N + G+AL ++ Y++A +++ KA++L+ N+ EAW + + L
Sbjct: 212 DKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKALKLNPNYGEAWNYRGVALESLER 271
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++ALE + ++ +++++ RG+ L L ++++A + + ++ ++ + Y R
Sbjct: 272 YQEALEAFDKARELNPNNAESWNNRGVALEKLERYQEAFQSYDQAIQLNLNDAQAWYNRG 331
Query: 627 SCYHAIGEYREAV 639
+ Y EA
Sbjct: 332 FPLGKLERYEEAF 344
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 130/254 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A +Y A +DQ +K +P + +A RG A E A F +AI+ N
Sbjct: 397 NQGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLN 456
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW +G A L EA+Q +A++ PN A+ + +G+ K + + A++
Sbjct: 457 PNHAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQS 516
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KL+ A+ G AL ++ Y++A ++ KAIQL+ N EAW + ++L
Sbjct: 517 YDQAIKLNPNYAEAWYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLE 576
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL+ + + ++ +++A RG+ L L ++++A + + ++P+N E Y R
Sbjct: 577 RYQEALQSYDKAIQLNPNYAEALFNRGVALERLERYEEAFQSFDKAIQLNPNNTEAWYNR 636
Query: 626 ASCYHAIGEYREAV 639
+ ++EA+
Sbjct: 637 GVVLGKLERHQEAI 650
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 124/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +Y A FDQ +K +P Y EA RG A E A + +AI+ N
Sbjct: 329 NRGFPLGKLERYEEAFQSFDQAIKLNPNYAEAWNYRGLALGNLERYEEAFQSYDQAIKLN 388
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW +G A L EA Q +A++ PN A + RG+ + + A +
Sbjct: 389 PNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQS 448
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KL+ + A+ G+AL + Y++A +++ +AI+L+ N+ EAW + L
Sbjct: 449 FDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLE 508
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL+ Q + ++ +++A++ RG L L +++A + + ++P++ E R
Sbjct: 509 RYQEALQSYDQAIKLNPNYAEAWYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNR 568
Query: 626 ASCYHAIGEYREAV 639
+ Y+EA+
Sbjct: 569 GFSLRNLERYQEAL 582
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 127/253 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A +Y A+ FD+ L+ +P E RG A + A+ + +A++ NP
Sbjct: 194 RGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKALKLNP 253
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ GEAW RG A +L EA++ KA E PN+A+ + RG+ K + + A +
Sbjct: 254 NYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRGVALEKLERYQEAFQSY 313
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ + A+ G L + Y++A ++ +AI+L+ N+ EAW + +L
Sbjct: 314 DQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLNPNYAEAWNYRGLALGNLER 373
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A + Q + ++ +++A++ +G+ L L ++++A + + ++P++ + R
Sbjct: 374 YEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNNRG 433
Query: 627 SCYHAIGEYREAV 639
+ Y EA
Sbjct: 434 VALGNLERYEEAF 446
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 125/253 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ N GK+ A+ F++ L+ + A RG A + E A+S F +A++ NP
Sbjct: 58 QGVVLFNLGKHQEALQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNP 117
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA RG L EA+ KALE PN A+ L RG+ + + + A +
Sbjct: 118 NYAEALSNRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSY 177
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ N A+ Y G+AL + Y++A KA++L+ N E W + +L
Sbjct: 178 DKALELNPNNAVAWNYRGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLER 237
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++AL+ ++ L ++ + +A++ RG+ L L ++++A++ ++P+N E R
Sbjct: 238 YQEALQSYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRG 297
Query: 627 SCYHAIGEYREAV 639
+ Y+EA
Sbjct: 298 VALEKLERYQEAF 310
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 118/229 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N +Y A FD+ +K +P + EA +G A + A+ + +AI+ N
Sbjct: 431 NRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSYDQAIKLN 490
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW +G A L EA+Q +A++ PN A+ + RG + + A +
Sbjct: 491 PNYAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNRGFALGNLECYQEAFQS 550
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ + A+ G +L ++ Y++A +++ KAIQL+ N+ EA + + L
Sbjct: 551 FDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQSYDKAIQLNPNYAEALFNRGVALERLE 610
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
E+A + + + ++ ++A++ RG++L L +H++AI L I
Sbjct: 611 RYEEAFQSFDKAIQLNPNNTEAWYNRGVVLGKLERHQEAIASYDQALVI 659
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 125/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +Y A +DQ ++ + +A RG E A F +AI+ N
Sbjct: 295 NRGVALEKLERYQEAFQSYDQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLN 354
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW RG A L EA Q +A++ PN A+ + +G+ + + A +
Sbjct: 355 PNYAEAWNYRGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQF 414
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KL+ + A+ G+AL ++ Y++A ++ KAI+L+ N EAW + L
Sbjct: 415 YDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLE 474
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL+ Q + ++ +++A++ +G+ L L ++++A++ + ++P+ E Y R
Sbjct: 475 RYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNR 534
Query: 626 ASCYHAIGEYREAV 639
+ Y+EA
Sbjct: 535 GFALGNLECYQEAF 548
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 124/255 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G N Y +A+ +Q+L +P EA G+G + + A+ F +A++
Sbjct: 22 LNQGRDHFNAQNYQAALDALEQVLTLEPNKVEAWNGQGVVLFNLGKHQEALQSFNKALEL 81
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + AW RG A LG+ EA+ KALE PN A+ L RG V K + + A+
Sbjct: 82 NSNEANAWNYRGVALLHLGKYEEALSTFDKALELNPNYAEALSNRGFVLGKLERYQEALP 141
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++L+ A G+AL + Y++A +++ KA++L+ N AW + L
Sbjct: 142 TFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELNPNNAVAWNYRGVALGKL 201
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++AL + L ++ ++ + RG+ L L ++++A++ L ++P+ E
Sbjct: 202 ERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKALKLNPNYGEAWNY 261
Query: 625 RASCYHAIGEYREAV 639
R ++ Y+EA+
Sbjct: 262 RGVALESLERYQEAL 276
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 2/226 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A +Y A+ +DQ +K +P Y EA +G A + A+ + +AI+ N
Sbjct: 465 NQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIKLN 524
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW RG A L EA Q KA++ PN A+ + RG + + A++
Sbjct: 525 PNYAEAWYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQS 584
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ A G+AL + Y++A ++ KAIQL+ N EAW + L
Sbjct: 585 YDKAIQLNPNYAEALFNRGVALERLERYEEAFQSFDKAIQLNPNNTEAWYNRGVVLGKLE 644
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL--GQHKKAIKDLS 609
++A+ Q L I + F A+ RG L++ L G K I L+
Sbjct: 645 RHQEAIASYDQALVIKRDFYLAWINRGNLIYSLSSGNFLKIISPLA 690
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
Query: 479 EPNSADI--LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
EP + +I L +G +F +++ AA++ L + L+ A+ G+ L ++G++++A
Sbjct: 12 EPVNEEIEALLNQGRDHFNAQNYQAALDALEQVLTLEPNKVEAWNGQGVVLFNLGKHQEA 71
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
++ KA++L+ N AW + L E+AL + L ++ +++A RG +L
Sbjct: 72 LQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNPNYAEALSNRGFVLG 131
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L ++++A+ L ++P+ E L+ R + Y+EA
Sbjct: 132 KLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAF 174
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD- 71
L K + + D+ + ++ A A++ R + L L + +A+ D L + +
Sbjct: 99 LGKYEEALSTFDKALELNPNYAEALSNRGFV--LGKLERYQEALPTFDKALELNPNYAEA 156
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
+ NR +LE ++ + DKAL+L+P A+ +G A L R +EAL ++K E
Sbjct: 157 LFNRGVALERLERYQEAFQSYDKALELNPNNAVAWNYRGVALGKLERYQEALPTFDKALE 216
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQ 70
+ L K + + ++ + ++S A+A R L L + +A+ D L +
Sbjct: 63 FNLGKHQEALQSFNKALELNSNEANAWNYRG--VALLHLGKYEEALSTFDKALELNPNYA 120
Query: 71 D-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
+ + NR F +LE ++ + DKAL+L+P +A +G A L R +EA ++K
Sbjct: 121 EALSNRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKA 180
Query: 130 YE 131
E
Sbjct: 181 LE 182
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR F LE ++ ++ DKA+QL+P +A +G A L R EEA ++K
Sbjct: 567 NRGFSLRNLERYQEALQSYDKAIQLNPNYAEALFNRGVALERLERYEEAFQSFDKA 622
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQS 66
+L + + + D+ ++++ A A + + L KL +L+++ +AI+ L+ A++
Sbjct: 472 KLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIK-LNPNYAEA 530
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
+ NR F LE ++ + DKA+QL+P +A+ +G + L R +EAL +
Sbjct: 531 W-----YNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQSY 585
Query: 127 EKG 129
+K
Sbjct: 586 DKA 588
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLRNWSKAIRILDSLLAQSYEIQ 70
RL + + D+ + ++ A A R + L KL + +A+ D L +
Sbjct: 166 RLERYQEAFQSYDKALELNPNNAVAWNYRGVALGKL---ERYQEALPTFDKALELNPNNA 222
Query: 71 DIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
++ NR LE ++ ++ +KAL+L+P +A+ +G A +L R +EAL ++K
Sbjct: 223 EVWFNRGVALVNLERYQEALQSYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKA 282
Query: 130 YE 131
E
Sbjct: 283 RE 284
>gi|220927089|ref|YP_002502391.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219951696|gb|ACL62088.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 988
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 124/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ +DQ L+ +P Y A RG A + E + AI+D+ + ++ N
Sbjct: 31 TRGYKFQSKGEYDRAIADYDQALRLNPKYVTAYSNRGFAYQSKGEYDRAIADYDQVLRLN 90
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + GE AI D +AL+ P A RG V + + A+ D
Sbjct: 91 PKNVIAYNNRGFAYQSKGEYDRAIADYDQALQLNPKYAIAYRNRGDVFRSKGEHDRAIAD 150
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++ + + AY GL S GEY +A +A++LD ++ A+ + +Q
Sbjct: 151 YSQALRFNPKYIFAYNNRGLVFQSKGEYDRAIADFDQALRLDPKYVVAYNNRGLAFQSKR 210
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ Q L +D ++ AY+ RGL G+H +AI D L +DP R
Sbjct: 211 EYDRAIADFDQALRLDSKYKFAYNNRGLTFQSKGEHDRAIADFDQALRLDPKYTFAYRNR 270
Query: 626 ASCYHAIGEYREAV 639
+ + GEY A+
Sbjct: 271 GDAFRSKGEYDRAI 284
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ+L+ +P A RG A + E + AI+D+ +A+Q N
Sbjct: 65 NRGFAYQSKGEYDRAIADYDQVLRLNPKNVIAYNNRGFAYQSKGEYDRAIADYDQALQLN 124
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A++ RG + GE AI D S+AL F P + RG+V +++ A+ D
Sbjct: 125 PKYAIAYRNRGDVFRSKGEHDRAIADYSQALRFNPKYIFAYNNRGLVFQSKGEYDRAIAD 184
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + AY GLA S EY +A +A++LD + A+ + +Q
Sbjct: 185 FDQALRLDPKYVVAYNNRGLAFQSKREYDRAIADFDQALRLDSKYKFAYNNRGLTFQSKG 244
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ Q L +D +++ AY RG G++ +AI D L +DP R
Sbjct: 245 EHDRAIADFDQALRLDPKYTFAYRNRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTAR 304
Query: 626 ASCYHAIGEYREAV 639
A + + +Y A+
Sbjct: 305 AFAFQSKRDYDRAL 318
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 132/270 (48%), Gaps = 3/270 (1%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V R++ I+ + +RG A ++G+Y AI+ +DQ L+ +P Y A RG +
Sbjct: 86 VLRLNPKNVIAYN---NRGFAYQSKGEYDRAIADYDQALQLNPKYAIAYRNRGDVFRSKG 142
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E + AI+D+++A++ NP A+ RG + GE AI D +AL +P + R
Sbjct: 143 EHDRAIADYSQALRFNPKYIFAYNNRGLVFQSKGEYDRAIADFDQALRLDPKYVVAYNNR 202
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ ++++ A+ D ++LD + K AY GL S GE+ +A +A++LD
Sbjct: 203 GLAFQSKREYDRAIADFDQALRLDSKYKFAYNNRGLTFQSKGEHDRAIADFDQALRLDPK 262
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ + ++ ++A+ Q L +D +++ AY R + +A+ D
Sbjct: 263 YTFAYRNRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQSKRDYDRALADYD 322
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L +DP ++ R + + G+Y A+
Sbjct: 323 QALRLDPKSVAAYRNRGDFFRSKGDYDRAI 352
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 123/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++G+Y AI+ FDQ L+ DP Y A RG A +RE + AI+DF +A++ +
Sbjct: 167 NRGLVFQSKGEYDRAIADFDQALRLDPKYVVAYNNRGLAFQSKREYDRAIADFDQALRLD 226
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG + GE AI D +AL +P RG +++ A+ D
Sbjct: 227 SKYKFAYNNRGLTFQSKGEHDRAIADFDQALRLDPKYTFAYRNRGDAFRSKGEYDRAIAD 286
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ LD + AYT A S +Y +A + +A++LD + A+ + F++
Sbjct: 287 YDQALLLDPKYTFAYTARAFAFQSKRDYDRALADYDQALRLDPKSVAAYRNRGDFFRSKG 346
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ ++A+ + L +D + AY+ RGL+ ++ AI D L IDP + R
Sbjct: 347 DYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIADFDQALLIDPKDAVIYRNR 406
Query: 626 ASCYHAIGEYREAV 639
+ + GEY A+
Sbjct: 407 GDVFRSKGEYDRAI 420
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 123/255 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ L DP Y A R A +R+ + A++D+ +A++ +
Sbjct: 269 NRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQSKRDYDRALADYDQALRLD 328
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A++ RG + G+ AI D +AL +P + + RG+V ++N A+ D
Sbjct: 329 PKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIAD 388
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +D ++ Y G S GEY +A + +A+QLD + + +
Sbjct: 389 FDQALLIDPKDAVIYRNRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKG 448
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL Q L +D + + Y RG + G+H +AI D L +DP I R
Sbjct: 449 EYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNR 508
Query: 626 ASCYHAIGEYREAVI 640
+ GEY A++
Sbjct: 509 GLVFQNKGEYNRAIL 523
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 6/257 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG+ ++ +Y AI+ FDQ L DP +A+I R F+ E + AI+++ +A+Q
Sbjct: 371 NRGLVFQSKNEYNLAIADFDQALLIDPK--DAVIYRNRGDVFRSKGEYDRAIANYDQALQ 428
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAA 502
+P RG A GE A+ D ++L+ +P A + RG V F+ K + + A
Sbjct: 429 LDPKYAAVHNNRGLAFYRKGEYDRALADYDQSLQLDPKQAVVYTNRGDV-FRIKGEHDRA 487
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D ++LD + AY GL + GEY +A + + ++LD + A+ + +Q
Sbjct: 488 IADYDQALRLDPKYIFAYNNRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYANRGDTFQ 547
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
++A+ Q L + ++ AY+ RGL + G+H +AI D L +DP +
Sbjct: 548 SKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAAF 607
Query: 623 YLRASCYHAIGEYREAV 639
R + + GEY A+
Sbjct: 608 NNRGAALNKKGEYDRAI 624
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 122/250 (48%), Gaps = 2/250 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ +DQ L+ DP Y RG A + E + A++D+ +++Q +
Sbjct: 405 NRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYDRALADYDQSLQLD 464
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG GE AI D +AL +P + RG+V ++N A+ D
Sbjct: 465 PKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYNRAILD 524
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQDL 564
++LD + AY G S GEY +A + +A+Q + ++ A+ G FY+
Sbjct: 525 YDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRK- 583
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ ++ L +D + + A++ RG L+ G++ +AI DL L + P Y
Sbjct: 584 GEHDRAIADYEEALRLDPKSAAAFNNRGAALNKKGEYDRAIADLDQALRLKPGFTNPHYH 643
Query: 625 RASCYHAIGE 634
R + G+
Sbjct: 644 RGMAFRHKGD 653
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 123/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G Y AI+ +D+ L+ DP A RG + E AI+DF +A+ +
Sbjct: 337 NRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIADFDQALLID 396
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P ++ RG + GE AI + +AL+ +P A + + RG+ ++ +++ A+ D
Sbjct: 397 PKDAVIYRNRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYDRALAD 456
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + YT G GE+ +A + +A++LD ++ A+ + +Q+
Sbjct: 457 YDQSLQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKG 516
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+A+ Q L +D +++ AY RG G++ +AI D L +P + R
Sbjct: 517 EYNRAILDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGR 576
Query: 626 ASCYHAIGEYREAV 639
++ GE+ A+
Sbjct: 577 GLAFYRKGEHDRAI 590
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A ++ Y A++ +DQ L+ DP A RG + + + AI+D+ EA++ +
Sbjct: 303 ARAFAFQSKRDYDRALADYDQALRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLD 362
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG + E AI D +AL +P A I RG V +++ A+ +
Sbjct: 363 PKNKLAYNNRGLVFQSKNEYNLAIADFDQALLIDPKDAVIYRNRGDVFRSKGEYDRAIAN 422
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + + + GLA GEY +A + +++QLD + + ++
Sbjct: 423 YDQALQLDPKYAAVHNNRGLAFYRKGEYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKG 482
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ Q L +D ++ AY+ RGL+ G++ +AI D L +DP R
Sbjct: 483 EHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYANR 542
Query: 626 ASCYHAIGEYREAV 639
+ + GEY A+
Sbjct: 543 GDTFQSKGEYDRAI 556
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A ++ +Y AI+ FDQ L+ D Y A RG + E + AI+DF +A++ +
Sbjct: 201 NRGLAFQSKREYDRAIADFDQALRLDSKYKFAYNNRGLTFQSKGEHDRAIADFDQALRLD 260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A++ RG A + GE AI D +AL +P R +D++ A+ D
Sbjct: 261 PKYTFAYRNRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQSKRDYDRALAD 320
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD ++ +AY G S G+Y +A + +A++LD A+ + +Q
Sbjct: 321 YDQALRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKN 380
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
A+ Q L ID + + Y RG + G++ +AI + L +DP R
Sbjct: 381 EYNLAIADFDQALLIDPKDAVIYRNRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNR 440
Query: 626 ASCYHAIGEYREAV 639
++ GEY A+
Sbjct: 441 GLAFYRKGEYDRAL 454
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 111/223 (49%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G++ AI+ +DQ L+ DP Y A RG + E AI D+ + ++ +P A+
Sbjct: 481 KGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYA 540
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + GE AI D +AL+ P + RG+ ++ + + A+ D ++LD
Sbjct: 541 NRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLD 600
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ +A+ G AL+ GEY +A +A++L F H ++ + ++AL
Sbjct: 601 PKSAAAFNNRGAALNKKGEYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALAD 660
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
L + + ++ +++ AY RG+ G+ +A+ DL+ + + P
Sbjct: 661 LNEAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVRLKP 703
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G++ AI+ + Q L+ +P Y A RG + E + AI+DF +A++ +
Sbjct: 133 NRGDVFRSKGEHDRAIADYSQALRFNPKYIFAYNNRGLVFQSKGEYDRAIADFDQALRLD 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + E AI D +AL + + RG+ + + A+ D
Sbjct: 193 PKYVVAYNNRGLAFQSKREYDRAIADFDQALRLDSKYKFAYNNRGLTFQSKGEHDRAIAD 252
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + AY G A S GEY +A + +A+ LD + A+ +Q
Sbjct: 253 FDQALRLDPKYTFAYRNRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQSKR 312
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ ++AL Q L +D + AY RG G + +AI D L +DP N R
Sbjct: 313 DYDRALADYDQALRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNR 372
Query: 626 ASCYHAIGEYREAV 639
+ + EY A+
Sbjct: 373 GLVFQSKNEYNLAI 386
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ +DQ L+ +P Y A GRG A + E + AI+D+ EA++ +
Sbjct: 541 NRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLD 600
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVE 504
P + A+ RG A GE AI DL +AL +P + + RG+ F+ K D + A+
Sbjct: 601 PKSAAAFNNRGAALNKKGEYDRAIADLDQALRLKPGFTNPHYHRGMA-FRHKGDLDRALA 659
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKK-----AEEAHLKA-IQLDRNFLEAWG 555
DL+ V+L+ + AY G+ + GE + AE LK ++ D FL+ G
Sbjct: 660 DLNEAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVRLKPELEADATFLKVRG 716
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 18 KTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA--QSYEIQDICNR 75
+ I + D+ +R+D A R LA S R + +AI D L Y+ NR
Sbjct: 180 RAIADFDQALRLDPKYVVAYNNR-GLA-FQSKREYDRAIADFDQALRLDSKYKFA-YNNR 236
Query: 76 AFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
+ H I D D+AL+LDP AY +G AF + G + A++ +++
Sbjct: 237 GLTFQSKGEHDRAIADFDQALRLDPKYTFAYRNRGDAFRSKGEYDRAIADYDQ 289
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQ 65
YR + + + + D+ +++D A T R ++ ++ ++ ++ +A+R LD
Sbjct: 445 YRKGEYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALR-LDPKYIF 503
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+Y NR + + I D D+ L+LDP AY +G F + G + A++
Sbjct: 504 AYN-----NRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIAD 558
Query: 126 WEKGYEH 132
+++ +H
Sbjct: 559 YDQALQH 565
>gi|427730483|ref|YP_007076720.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
gi|427366402|gb|AFY49123.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
Length = 604
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 124/253 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI G Y AI+ F Q L+ P A RG E + AI+D AIQ +P
Sbjct: 153 RGIVHNGCGDYPEAIADFQQALQWHPYLAAAYSSRGVVYHNLGEYQQAIADHKRAIQLDP 212
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG LG+ AI+D + A+E PN A + RG + + K+++ A+ED
Sbjct: 213 NLAEAYHNRGNVYYVLGDYPAAIRDYNHAIEINPNLATAYYNRGAIRSRQKEYHLALEDF 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KL+ E+ AY GL G+Y+ A + +A+Q++ + +G + L +
Sbjct: 273 NQALKLNPEDAQAYAERGLIREVRGDYQGAIADYNQALQINPYLVLVYGFRANVRRQLGD 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
AL Q+L + + + Y R LG ++ AI D + L I+P+ +E Y RA
Sbjct: 333 YPGALADSNQLLTLHPQLAAGYCDRATARRHLGDYQGAISDYNQALQINPNLVEAYYGRA 392
Query: 627 SCYHAIGEYREAV 639
+ A+ ++ A+
Sbjct: 393 ITHEALQDFLGAI 405
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 124/251 (49%), Gaps = 8/251 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ F+ ++ +P + EA RG AR + AI+D+ +A+ NP+ E++ RG
Sbjct: 53 YLGAIAFFNLSVEINPHFAEAYYHRGNARYCLADYSRAIADYHQALDINPTFAESYYCRG 112
Query: 457 QARAALGESVEAIQDLSKALEFEP--------NSADILHERGIVNFKFKDFNAAVEDLSA 508
+A A+G+ +AI D +E P + A+ + RGIV+ D+ A+ D
Sbjct: 113 RAYFAVGDYDQAIADYINTIEVNPQLASHINLDIANAYYHRGIVHNGCGDYPEAIADFQQ 172
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++ +AY+ G+ ++GEY++A H +AIQLD N EA+ + Y L +
Sbjct: 173 ALQWHPYLAAAYSSRGVVYHNLGEYQQAIADHKRAIQLDPNLAEAYHNRGNVYYVLGDYP 232
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
A+ + I+ + AY+ RG + ++ A++D + L ++P + + R
Sbjct: 233 AAIRDYNHAIEINPNLATAYYNRGAIRSRQKEYHLALEDFNQALKLNPEDAQAYAERGLI 292
Query: 629 YHAIGEYREAV 639
G+Y+ A+
Sbjct: 293 REVRGDYQGAI 303
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 130/268 (48%), Gaps = 5/268 (1%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++I +D L+ RG G Y +AI ++ ++ +P A RG R+ Q+E
Sbjct: 206 RAIQLDPNLAEAYHNRGNVYYVLGDYPAAIRDYNHAIEINPNLATAYYNRGAIRSRQKEY 265
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+ DF +A++ NP +A+ RG R G+ AI D ++AL+ P + R
Sbjct: 266 HLALEDFNQALKLNPEDAQAYAERGLIREVRGDYQGAIADYNQALQINPYLVLVYGFRAN 325
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V + D+ A+ D + + L + + Y A +G+Y+ A + +A+Q++ N +
Sbjct: 326 VRRQLGDYPGALADSNQLLTLHPQLAAGYCDRATARRHLGDYQGAISDYNQALQINPNLV 385
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ ++ L + A+ Q + F+ AY RG + LG H+ A+ D +
Sbjct: 386 EAYYGRAITHEALQDFLGAIADNTQAIRFAPDFAPAYCNRGNVRRQLGDHRGALADYNQA 445
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
L I+P+ +E + R + ++A Y+EA+
Sbjct: 446 LAINPNLVESYFNRGALHYAQQNYQEAI 473
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 111/222 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R A+ + G Y AIS ++Q L+ +P EA GR ++ AI+D T+AI+ P
Sbjct: 357 RATARRHLGDYQGAISDYNQALQINPNLVEAYYGRAITHEALQDFLGAIADNTQAIRFAP 416
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG R LG+ A+ D ++AL PN + RG +++ +++ A+ D
Sbjct: 417 DFAPAYCNRGNVRRQLGDHRGALADYNQALAINPNLVESYFNRGALHYAQQNYQEAIADY 476
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++++ ++ Y++ + ++ +Y +A + +AI +D + +E W + + + L N
Sbjct: 477 TQALEINPQSALFYSHRANSYYALNQYHQAIADYTQAILIDSSDVEDWYNRGRSHAQLGN 536
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+AL L L ++ AY LR + LG + AI D
Sbjct: 537 FPEALADLNTALQRQPYWASAYLLRAEIRRNLGDKEGAISDF 578
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 119/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + +Y A+ F+Q LK +P +A RG R + + + AI+D+ +A+Q N
Sbjct: 254 NRGAIRSRQKEYHLALEDFNQALKLNPEDAQAYAERGLIREVRGDYQGAIADYNQALQIN 313
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + R R LG+ A+ D ++ L P A +R D+ A+ D
Sbjct: 314 PYLVLVYGFRANVRRQLGDYPGALADSNQLLTLHPQLAAGYCDRATARRHLGDYQGAISD 373
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY + ++ ++ A + +AI+ +F A+ + + L
Sbjct: 374 YNQALQINPNLVEAYYGRAITHEALQDFLGAIADNTQAIRFAPDFAPAYCNRGNVRRQLG 433
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ AL Q L I+ ++Y RG L + +++AI D + L I+P + R
Sbjct: 434 DHRGALADYNQALAINPNLVESYFNRGALHYAQQNYQEAIADYTQALEINPQSALFYSHR 493
Query: 626 ASCYHAIGEYREAV 639
A+ Y+A+ +Y +A+
Sbjct: 494 ANSYYALNQYHQAI 507
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 119/253 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + G Y AI+ ++Q L+ +P R R + A++D + + +P
Sbjct: 289 RGLIREVRGDYQGAIADYNQALQINPYLVLVYGFRANVRRQLGDYPGALADSNQLLTLHP 348
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ R AR LG+ AI D ++AL+ PN + + R I + +DF A+ D
Sbjct: 349 QLAAGYCDRATARRHLGDYQGAISDYNQALQINPNLVEAYYGRAITHEALQDFLGAIADN 408
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ + AY G +G+++ A + +A+ ++ N +E++ + + N
Sbjct: 409 TQAIRFAPDFAPAYCNRGNVRRQLGDHRGALADYNQALAINPNLVESYFNRGALHYAQQN 468
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++A+ Q L I+ + + Y R + L Q+ +AI D + + ID S++E Y R
Sbjct: 469 YQEAIADYTQALEINPQSALFYSHRANSYYALNQYHQAIADYTQAILIDSSDVEDWYNRG 528
Query: 627 SCYHAIGEYREAV 639
+ +G + EA+
Sbjct: 529 RSHAQLGNFPEAL 541
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 69/135 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G + A++ ++Q L +P E+ RG Q+ + AI+D+T+A++ N
Sbjct: 424 NRGNVRRQLGDHRGALADYNQALAINPNLVESYFNRGALHYAQQNYQEAIADYTQALEIN 483
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + R + AL + +AI D ++A+ + + + + RG + + +F A+ D
Sbjct: 484 PQSALFYSHRANSYYALNQYHQAIADYTQAILIDSSDVEDWYNRGRSHAQLGNFPEALAD 543
Query: 506 LSACVKLDKENKSAY 520
L+ ++ SAY
Sbjct: 544 LNTALQRQPYWASAY 558
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 100/528 (18%), Positives = 197/528 (37%), Gaps = 103/528 (19%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW------- 126
N +C L + I D +AL ++PT ++Y +G A+ A+G ++A++ +
Sbjct: 79 NARYC---LADYSRAIADYHQALDINPTFAESYYCRGRAYFAVGDYDQAIADYINTIEVN 135
Query: 127 -----------EKGYEH--ALHQS--------ADLKQFLELEELLTAAKQDRSVTCEYDV 165
Y H +H AD +Q L+ L AA R V ++
Sbjct: 136 PQLASHINLDIANAYYHRGIVHNGCGDYPEAIADFQQALQWHPYLAAAYSSRGVVYH-NL 194
Query: 166 SNSMSSLTVSESGLNANDKMSETSENHNKSDIC----DSSSQSRDVSETCSKSSHDPDLC 221
++ + + + ++E HN+ ++ D + RD + +P+L
Sbjct: 195 GEYQQAIADHKRAIQLDPNLAEAY--HNRGNVYYVLGDYPAAIRDYNHAIEI---NPNLA 249
Query: 222 NG-------RSDEAKGGSSVPVSKSGLHIN----------GKLREVSENHNGS-SDGSKS 263
RS + + ++ L +N G +REV ++ G+ +D +++
Sbjct: 250 TAYYNRGAIRSRQKEYHLALEDFNQALKLNPEDAQAYAERGLIREVRGDYQGAIADYNQA 309
Query: 264 ---------THASRDASEINRQSSD--------------DFDICNGPIDKASVNERHGRQ 300
+ R + + RQ D + G D+A+ G
Sbjct: 310 LQINPYLVLVYGFR--ANVRRQLGDYPGALADSNQLLTLHPQLAAGYCDRATARRHLG-- 365
Query: 301 TNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDS----TESRSKLSFKWDMLK 356
D +S + +L + E+Y +I+ D ++ + F D
Sbjct: 366 -----DYQGAISDYNQALQINPNLVEAYYGRAITHEALQDFLGAIADNTQAIRFAPDFAP 420
Query: 357 ETSNEAKRNKKF-----CVTRISKSKSIS---VDFRLSRGIAQVNEGKYASAISIFDQIL 408
N ++ + +++ +I+ V+ +RG + Y AI+ + Q L
Sbjct: 421 AYCNRGNVRRQLGDHRGALADYNQALAINPNLVESYFNRGALHYAQQNYQEAIADYTQAL 480
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ +P R + + AI+D+T+AI + S E W RG++ A LG EA
Sbjct: 481 EINPQSALFYSHRANSYYALNQYHQAIADYTQAILIDSSDVEDWYNRGRSHAQLGNFPEA 540
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ DL+ AL+ +P A R + D A+ D ++ +++
Sbjct: 541 LADLNTALQRQPYWASAYLLRAEIRRNLGDKEGAISDFQQSAEIYQQD 588
>gi|300868839|ref|ZP_07113446.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
gi|300333190|emb|CBN58638.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
Length = 334
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 132/248 (53%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + +G Y AI+ F+Q+L +P + RG + ++ + AI+D ++A+ +P
Sbjct: 9 RGLNKAKKGYYEDAIADFNQVLAINPSDAKTYNNRGLVYYYLKDYQKAITDLSQALDISP 68
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA+ RG A LGE+ +AI+DL++ALE P S I + RG+V +++AA+ D
Sbjct: 69 DLFEAYLNRGNAWRHLGENQKAIEDLNRALESNPQSDAIYNNRGLVLANLGEYDAAIHDY 128
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ N Y G A +G+ +KA + + +QL+ +++ + + Y L +
Sbjct: 129 DRAIAINPSNYKTYYNRGRAYYLLGDKQKAIDDFNQTLQLNPTYIKGYINRGLSYHHLGD 188
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ KA++ + L +D A++ RG + + L + K AI+D L +DP+ ++ R
Sbjct: 189 NLKAIDDYNEALKLDPTNVYAFYNRGCVRYKLLEMKLAIEDFDKALQLDPTYVKAYLNRG 248
Query: 627 SCYHAIGE 634
+ +G+
Sbjct: 249 LARYKLGD 256
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 105/230 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ Y AI+ Q L P EA + RG A E + AI D A++SN
Sbjct: 42 NRGLVYYYLKDYQKAITDLSQALDISPDLFEAYLNRGNAWRHLGENQKAIEDLNRALESN 101
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG A LGE AI D +A+ P++ + RG + D A++D
Sbjct: 102 PQSDAIYNNRGLVLANLGEYDAAIHDYDRAIAINPSNYKTYYNRGRAYYLLGDKQKAIDD 161
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ Y GL+ +G+ KA + + +A++LD + A+ + L
Sbjct: 162 FNQTLQLNPTYIKGYINRGLSYHHLGDNLKAIDDYNEALKLDPTNVYAFYNRGCVRYKLL 221
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ A+E + L +D + KAY RGL + LG A KD + I+
Sbjct: 222 EMKLAIEDFDKALQLDPTYVKAYLNRGLARYKLGDAPGANKDFYHVMCIN 271
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T +S++ IS D L+RG A + G+ AI ++ L+ +P RG
Sbjct: 56 AITDLSQALDISPDLFEAYLNRGNAWRHLGENQKAIEDLNRALESNPQSDAIYNNRGLVL 115
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A E +AAI D+ AI NPS + + RG+A LG+ +AI D ++ L+ P
Sbjct: 116 ANLGEYDAAIHDYDRAIAINPSNYKTYYNRGRAYYLLGDKQKAIDDFNQTLQLNPTYIKG 175
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG+ D A++D + +KLD N A+ G + E K A E KA+Q
Sbjct: 176 YINRGLSYHHLGDNLKAIDDYNEALKLDPTNVYAFYNRGCVRYKLLEMKLAIEDFDKALQ 235
Query: 546 LDRNFLEAW 554
LD +++A+
Sbjct: 236 LDPTYVKAY 244
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G AI F+Q L+ +P Y + I RG + + AI D+ EA++ +
Sbjct: 144 NRGRAYYLLGDKQKAIDDFNQTLQLNPTYIKGYINRGLSYHHLGDNLKAIDDYNEALKLD 203
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R L E AI+D KAL+ +P RG+ +K D A +D
Sbjct: 204 PTNVYAFYNRGCVRYKLLEMKLAIEDFDKALQLDPTYVKAYLNRGLARYKLGDAPGANKD 263
Query: 506 LSACVKLDKE 515
+ ++ E
Sbjct: 264 FYHVMCINSE 273
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG++ + G AI +++ LK DP A RG R E++ AI DF +A+Q
Sbjct: 177 INRGLSYHHLGDNLKAIDDYNEALKLDPTNVYAFYNRGCVRYKLLEMKLAIEDFDKALQL 236
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
+P+ +A+ RG AR LG++ A +D +
Sbjct: 237 DPTYVKAYLNRGLARYKLGDAPGANKDFYHVM 268
>gi|310778588|ref|YP_003966921.1| hypothetical protein [Ilyobacter polytropus DSM 2926]
gi|309747911|gb|ADO82573.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926]
Length = 363
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 127/247 (51%), Gaps = 5/247 (2%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +D + +RG + G AI+ +D+ +K +P + A RG A+ F +
Sbjct: 100 KAIELDPKFIYAYSNRGFTKTKLGDLEGAIADYDKAIKLNPKFKLAYFNRGNAKYFSDDY 159
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+D+++ I +P + A+ RG A+ LGE +I+D +KA+ +P + RG
Sbjct: 160 KGAINDYSKVINIDPKSQVAYNNRGLAKWELGEYKSSIEDYNKAIRLDPKYKLSYNNRGF 219
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ KD+ A+ D + ++LD + AY+ G+A + +Y A E + K I+ D ++
Sbjct: 220 TKAQLKDYKGAINDYNKTIELDPDFVLAYSNRGMAKLKLQDYNGAMEDYNKVIESDPDYE 279
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ L + ALE +V+ +D F +AY+ RG++ LG A++D
Sbjct: 280 VAYYRRGLVKTKLRDYHGALEDYNKVIKLDPNFKQAYYNRGIIKTKLGDFDGALEDFGKT 339
Query: 612 LGIDPSN 618
+ +DP++
Sbjct: 340 IKLDPND 346
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 141/274 (51%), Gaps = 5/274 (1%)
Query: 371 TRISKSKSISVD--FRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+R K+I +D F+ + RGI++ + G + A+ FD+ ++ DP + A RG +
Sbjct: 60 SRKDYDKTIQLDPEFKYAYDNRGISKGDLGDFEGAVEDFDKAIELDPKFIYAYSNRGFTK 119
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+LE AI+D+ +AI+ NP A+ RG A+ + AI D SK + +P S
Sbjct: 120 TKLGDLEGAIADYDKAIKLNPKFKLAYFNRGNAKYFSDDYKGAINDYSKVINIDPKSQVA 179
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ ++ ++ +++ED + ++LD + K +Y G + + +YK A + K I+
Sbjct: 180 YNNRGLAKWELGEYKSSIEDYNKAIRLDPKYKLSYNNRGFTKAQLKDYKGAINDYNKTIE 239
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
LD +F+ A+ + L + A+E +V+ D + AY+ RGL+ L + A+
Sbjct: 240 LDPDFVLAYSNRGMAKLKLQDYNGAMEDYNKVIESDPDYEVAYYRRGLVKTKLRDYHGAL 299
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+D + + +DP+ + Y R +G++ A+
Sbjct: 300 EDYNKVIKLDPNFKQAYYNRGIIKTKLGDFDGAL 333
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 39 ARIELAKL-CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQ 97
A+ EL + S+ +++KAIR LD SY NR F +QL+ +K I D +K ++
Sbjct: 186 AKWELGEYKSSIEDYNKAIR-LDPKYKLSYN-----NRGFTKAQLKDYKGAINDYNKTIE 239
Query: 98 LDPTLLQAYILKGCA 112
LDP + AY +G A
Sbjct: 240 LDPDFVLAYSNRGMA 254
>gi|33862569|ref|NP_894129.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
9313]
gi|33640682|emb|CAE20471.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
Length = 1057
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 143/270 (52%), Gaps = 6/270 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SKSI ++ + + RG A+ G AI+ + ++ +P + A RG A+ ++
Sbjct: 697 SKSIEINPQYAAAYYNRGNAKRKLGDNQGAIADCSKAIEINPHFALAYNNRGLAKYDSKD 756
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+T+AI+ +P +A+ RG A++ LG++ AI D +KA+E +P A + RG
Sbjct: 757 YQGAIADYTKAIEIDPKDADAYSNRGYAKSHLGDTQGAIADYTKAIEIDPKDAPTYYNRG 816
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D A+ D + +++D ++ AY+ G A S +G+ + A + KAI++D
Sbjct: 817 YAKSHLGDTQGAITDYTKAIEIDPKDSDAYSNRGYAKSHLGDTQGAIADYTKAIEIDPKD 876
Query: 551 LEAWGHLTQFY-QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ + ++L + + A+ + + I+ ++S AY+ RG L +++AI D +
Sbjct: 877 ADAYSNRGLVKDEELGDHQGAIADYTKAIEINPQYSNAYYNRGNAKSELKDYQEAIADYT 936
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ IDP + Y R + + +Y+EA+
Sbjct: 937 KAIEIDPKDAPAYYNRGNAKSELKDYQEAI 966
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 119/234 (50%)
Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
++++ +P Y +A RG A+ + + A+ DF A++ NP+ E + RG + +G++
Sbjct: 460 KVIELNPNYADAYSLRGVAKFQLDDYQGALEDFDYALEINPNDAETYFMRGNVKGEIGDT 519
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
AI D SKA+E +P AD RG+ + KD+ A+ D + +++D + AY GL
Sbjct: 520 EGAISDYSKAIEIDPKDADAFTNRGLAKYDSKDYQGAIADYNKAIEIDPQLADAYNNRGL 579
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
+G+++ A + K++ ++ +A+ + D + + A+ + L I+ F+
Sbjct: 580 VKDELGDHQGAIADYNKSLDINPQLADAYNNRGLAKYDSKDYQGAIADYNKSLDINPHFA 639
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY+ RGL LG H+ AI D + + I P + R + +G+ + A+
Sbjct: 640 LAYNNRGLAKDELGNHQGAIADYNKAIEIKPQYANAYFNRGNAKSDLGDTQGAI 693
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 128/256 (50%), Gaps = 1/256 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A+ + G AI+++ + ++ +P Y A RG A+ + + AI+D ++AI+
Sbjct: 677 FNRGNAKSDLGDTQGAIAVYSKSIEINPQYAAAYYNRGNAKRKLGDNQGAIADCSKAIEI 736
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG A+ + AI D +KA+E +P AD RG D A+
Sbjct: 737 NPHFALAYNNRGLAKYDSKDYQGAIADYTKAIEIDPKDADAYSNRGYAKSHLGDTQGAIA 796
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +++D ++ Y G A S +G+ + A + KAI++D +A+ + L
Sbjct: 797 DYTKAIEIDPKDAPTYYNRGYAKSHLGDTQGAITDYTKAIEIDPKDSDAYSNRGYAKSHL 856
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLL-HGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+++ A+ + + ID + + AY RGL+ LG H+ AI D + + I+P Y
Sbjct: 857 GDTQGAIADYTKAIEIDPKDADAYSNRGLVKDEELGDHQGAIADYTKAIEINPQYSNAYY 916
Query: 624 LRASCYHAIGEYREAV 639
R + + +Y+EA+
Sbjct: 917 NRGNAKSELKDYQEAI 932
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 119/232 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG + G AIS + + ++ DP +A RG A+ ++ + AI+D+ +AI+
Sbjct: 507 FMRGNVKGEIGDTEGAISDYSKAIEIDPKDADAFTNRGLAKYDSKDYQGAIADYNKAIEI 566
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P +A+ RG + LG+ AI D +K+L+ P AD + RG+ + KD+ A+
Sbjct: 567 DPQLADAYNNRGLVKDELGDHQGAIADYNKSLDINPQLADAYNNRGLAKYDSKDYQGAIA 626
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + ++ AY GLA +G ++ A + KAI++ + A+ + DL
Sbjct: 627 DYNKSLDINPHFALAYNNRGLAKDELGNHQGAIADYNKAIEIKPQYANAYFNRGNAKSDL 686
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+++ A+ + + I+ +++ AY+ RG LG ++ AI D S + I+P
Sbjct: 687 GDTQGAIAVYSKSIEINPQYAAAYYNRGNAKRKLGDNQGAIADCSKAIEINP 738
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 133/247 (53%), Gaps = 6/247 (2%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D + +RG A+ + G AI+ + + ++ DP RG A++ +
Sbjct: 765 TKAIEIDPKDADAYSNRGYAKSHLGDTQGAIADYTKAIEIDPKDAPTYYNRGYAKSHLGD 824
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+T+AI+ +P +A+ RG A++ LG++ AI D +KA+E +P AD RG
Sbjct: 825 TQGAITDYTKAIEIDPKDSDAYSNRGYAKSHLGDTQGAIADYTKAIEIDPKDADAYSNRG 884
Query: 491 IV-NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+V + + D A+ D + ++++ + +AY G A S + +Y++A + KAI++D
Sbjct: 885 LVKDEELGDHQGAIADYTKAIEINPQYSNAYYNRGNAKSELKDYQEAIADYTKAIEIDPK 944
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + +L + ++A+ + + I+ + + AY+ RGL + ++ I D +
Sbjct: 945 DAPAYYNRGNAKSELKDYQEAIADYSKAIEINPQLALAYNNRGLAKYDSKDYQGTIADYN 1004
Query: 610 SGLGIDP 616
+ IDP
Sbjct: 1005 KAIEIDP 1011
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 140/302 (46%), Gaps = 38/302 (12%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGK-------YASAISIFDQILKEDPMYPEALIGRGT 423
SK+I +D + +RGI + + G+ Y AI+ +D+ + +P +A + RG
Sbjct: 222 SKAIEIDPKNDSAYNNRGIIEDDLGQRKLDDFYYQLAIADYDKAIDINPSNADAYLNRGH 281
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
+ QR+ + AI+DF A+ +P + +RG A+ LG AI D +KA+E +P A
Sbjct: 282 TKLNQRDFDGAIADFNHALNIDPQVDNIYLKRGVAKDELGNHQGAIADYTKAIEIDPQDA 341
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ RG+ K DF ++ D + +++D + AY G + +G+ A E KA
Sbjct: 342 LAYNNRGVAKSKSNDFQGSISDCTKAIEIDSKYAFAYRNRGHSKKELGDLIGASEDWKKA 401
Query: 544 IQLD---------RNFLEAWGHLTQFYQ-----------------DLANSEKALECLQQV 577
+L L+ + Q +Q D ++ ++ L +V
Sbjct: 402 AELGDQGAAELLKEERLKTGSLIDQMFQVTIGKQSSNESDGLDLSDTGDTNGKIKELTKV 461
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
+ ++ ++ AY LRG+ L ++ A++D L I+P++ E ++R + IG+
Sbjct: 462 IELNPNYADAYSLRGVAKFQLDDYQGALEDFDYALEINPNDAETYFMRGNVKGEIGDTEG 521
Query: 638 AV 639
A+
Sbjct: 522 AI 523
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 122/253 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ Y A+ FD L+ +P E RG + + E AISD+++AI+ +P
Sbjct: 475 RGVAKFQLDDYQGALEDFDYALEINPNDAETYFMRGNVKGEIGDTEGAISDYSKAIEIDP 534
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG A+ + AI D +KA+E +P AD + RG+V + D A+ D
Sbjct: 535 KDADAFTNRGLAKYDSKDYQGAIADYNKAIEIDPQLADAYNNRGLVKDELGDHQGAIADY 594
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ + AY GLA +Y+ A + K++ ++ +F A+ + +L N
Sbjct: 595 NKSLDINPQLADAYNNRGLAKYDSKDYQGAIADYNKSLDINPHFALAYNNRGLAKDELGN 654
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ A+ + + I +++ AY RG LG + AI S + I+P Y R
Sbjct: 655 HQGAIADYNKAIEIKPQYANAYFNRGNAKSDLGDTQGAIAVYSKSIEINPQYAAAYYNRG 714
Query: 627 SCYHAIGEYREAV 639
+ +G+ + A+
Sbjct: 715 NAKRKLGDNQGAI 727
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 131/269 (48%), Gaps = 5/269 (1%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+KS+ ++ +L+ RG+A+ + Y AI+ +++ L +P + A RG A+
Sbjct: 595 NKSLDINPQLADAYNNRGLAKYDSKDYQGAIADYNKSLDINPHFALAYNNRGLAKDELGN 654
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+ +AI+ P A+ RG A++ LG++ AI SK++E P A + RG
Sbjct: 655 HQGAIADYNKAIEIKPQYANAYFNRGNAKSDLGDTQGAIAVYSKSIEINPQYAAAYYNRG 714
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K D A+ D S ++++ AY GLA +Y+ A + KAI++D
Sbjct: 715 NAKRKLGDNQGAIADCSKAIEINPHFALAYNNRGLAKYDSKDYQGAIADYTKAIEIDPKD 774
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+A+ + L +++ A+ + + ID + + Y+ RG LG + AI D +
Sbjct: 775 ADAYSNRGYAKSHLGDTQGAIADYTKAIEIDPKDAPTYYNRGYAKSHLGDTQGAITDYTK 834
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ IDP + + R +G+ + A+
Sbjct: 835 AIEIDPKDSDAYSNRGYAKSHLGDTQGAI 863
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 5/269 (1%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D +L+ RG+ + G + AI+ +++ L +P +A RG A+ ++
Sbjct: 561 NKAIEIDPQLADAYNNRGLVKDELGDHQGAIADYNKSLDINPQLADAYNNRGLAKYDSKD 620
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+ +++ NP A+ RG A+ LG AI D +KA+E +P A+ RG
Sbjct: 621 YQGAIADYNKSLDINPHFALAYNNRGLAKDELGNHQGAIADYNKAIEIKPQYANAYFNRG 680
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D A+ S ++++ + +AY G A +G+ + A KAI+++ +F
Sbjct: 681 NAKSDLGDTQGAIAVYSKSIEINPQYAAAYYNRGNAKRKLGDNQGAIADCSKAIEINPHF 740
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + D + + A+ + + ID + + AY RG LG + AI D +
Sbjct: 741 ALAYNNRGLAKYDSKDYQGAIADYTKAIEIDPKDADAYSNRGYAKSHLGDTQGAIADYTK 800
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ IDP + Y R +G+ + A+
Sbjct: 801 AIEIDPKDAPTYYNRGYAKSHLGDTQGAI 829
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 123/238 (51%), Gaps = 6/238 (2%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D + +RG A+ + G AI+ + + ++ DP +A RG A++ +
Sbjct: 799 TKAIEIDPKDAPTYYNRGYAKSHLGDTQGAITDYTKAIEIDPKDSDAYSNRGYAKSHLGD 858
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQAR-AALGESVEAIQDLSKALEFEPNSADILHER 489
+ AI+D+T+AI+ +P +A+ RG + LG+ AI D +KA+E P ++ + R
Sbjct: 859 TQGAIADYTKAIEIDPKDADAYSNRGLVKDEELGDHQGAIADYTKAIEINPQYSNAYYNR 918
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + KD+ A+ D + +++D ++ AY G A S + +Y++A + KAI+++
Sbjct: 919 GNAKSELKDYQEAIADYTKAIEIDPKDAPAYYNRGNAKSELKDYQEAIADYSKAIEINPQ 978
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
A+ + D + + + + + ID +++ AY RG LG K A +D
Sbjct: 979 LALAYNNRGLAKYDSKDYQGTIADYNKAIEIDPQYANAYKNRGNAKKELGVLKGACED 1036
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 123/559 (22%), Positives = 229/559 (40%), Gaps = 82/559 (14%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARI----ELAK-LCSLRNWSKAIRILDSLL 63
++Y I + ++ + +D +A A R EL ++ +++K++ I + L
Sbjct: 546 AKYDSKDYQGAIADYNKAIEIDPQLADAYNNRGLVKDELGDHQGAIADYNKSLDI-NPQL 604
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
A +Y NR + ++ I D +K+L ++P AY +G A LG + A+
Sbjct: 605 ADAYN-----NRGLAKYDSKDYQGAIADYNKSLDINPHFALAYNNRGLAKDELGNHQGAI 659
Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNAND 183
AD + +E++ A +R + D+ ++ ++ V + N
Sbjct: 660 --------------ADYNKAIEIKPQYANAYFNRG-NAKSDLGDTQGAIAVYSKSIEINP 704
Query: 184 KMSETSENHN--KSDICDSSSQSRDVSETCSKSSHDPDLCNGRS----DEAKGGSSVPVS 237
+ + N K + D+ D S+ + H N R D ++
Sbjct: 705 QYAAAYYNRGNAKRKLGDNQGAIADCSKAIEINPHFALAYNNRGLAKYDSKDYQGAIADY 764
Query: 238 KSGLHINGK------LREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKA 291
+ I+ K R +++H G + G+ + + A EI+ P D
Sbjct: 765 TKAIEIDPKDADAYSNRGYAKSHLGDTQGAIADYTK--AIEID------------PKDAP 810
Query: 292 SVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFK 351
+ R G H L D+ Y+K+ D K SD+ +R +
Sbjct: 811 TYYNR------GYAKSH---------LGDTQGAITDYTKAIEIDPKDSDAYSNRG---YA 852
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSIS---VDFRLSRGIAQVNE-GKYASAISIFDQI 407
L +T + +K+ I D +RG+ + E G + AI+ + +
Sbjct: 853 KSHLGDTQG--------AIADYTKAIEIDPKDADAYSNRGLVKDEELGDHQGAIADYTKA 904
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ +P Y A RG A++ ++ + AI+D+T+AI+ +P A+ RG A++ L + E
Sbjct: 905 IEINPQYSNAYYNRGNAKSELKDYQEAIADYTKAIEIDPKDAPAYYNRGNAKSELKDYQE 964
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI D SKA+E P A + RG+ + KD+ + D + +++D + +AY G A
Sbjct: 965 AIADYSKAIEINPQLALAYNNRGLAKYDSKDYQGTIADYNKAIEIDPQYANAYKNRGNAK 1024
Query: 528 SSIGEYKKAEEAHLKAIQL 546
+G K A E KA +L
Sbjct: 1025 KELGVLKGACEDWKKAAEL 1043
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 14/219 (6%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G ++ +++ AI D + I+ N A+ +R + LG+ AI D +KA+E +PN
Sbjct: 62 GKSKLEKKDFYGAIEDLNKEIEINSQDVAAYSKRANLKEKLGDHKGAIDDFTKAIEIDPN 121
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A + RG ++ D A+ D + + + K Y + G+A IG + A +
Sbjct: 122 HAHPYYNRGFSKWQLGDIQGAIADYNHALAIYPLFKDVYFFRGMAKDQIGNFDGAIADYS 181
Query: 542 KAIQLD-------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
K I++D R+ A+ H + N A+ + + ID + AY+ RG++
Sbjct: 182 KVIEIDPDQLYKYRDECSAYFHRGKAKHSSGNISGAIADYSKAIEIDPKNDSAYNNRGII 241
Query: 595 LHGLGQHK-------KAIKDLSSGLGIDPSNIECLYLRA 626
LGQ K AI D + I+PSN + R
Sbjct: 242 EDDLGQRKLDDFYYQLAIADYDKAIDINPSNADAYLNRG 280
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 122/554 (22%), Positives = 225/554 (40%), Gaps = 72/554 (12%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCS------LRNWSKAIRILDSLLAQS 66
+ T I + + + +D A A T R LAK S + +++KAI I D LA +
Sbjct: 516 IGDTEGAISDYSKAIEIDPKDADAFTNR-GLAKYDSKDYQGAIADYNKAIEI-DPQLADA 573
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y NR +L H+ I D +K+L ++P L AY +G A + A++ +
Sbjct: 574 YN-----NRGLVKDELGDHQGAIADYNKSLDINPQLADAYNNRGLAKYDSKDYQGAIADY 628
Query: 127 EKGY------------------EHALHQSA--DLKQFLELEELLTAAKQDRSVTCEYDVS 166
K E HQ A D + +E++ A +R + D+
Sbjct: 629 NKSLDINPHFALAYNNRGLAKDELGNHQGAIADYNKAIEIKPQYANAYFNRG-NAKSDLG 687
Query: 167 NSMSSLTVSESGLNANDKMSETSENHN--KSDICDSSSQSRDVSETCSKSSHDPDLCNGR 224
++ ++ V + N + + N K + D+ D S+ + H N R
Sbjct: 688 DTQGAIAVYSKSIEINPQYAAAYYNRGNAKRKLGDNQGAIADCSKAIEINPHFALAYNNR 747
Query: 225 S----DEAKGGSSVPVSKSGLHINGK------LREVSENHNGSSDGSKSTHASRDASEIN 274
D ++ + I+ K R +++H G + G+ + + A EI+
Sbjct: 748 GLAKYDSKDYQGAIADYTKAIEIDPKDADAYSNRGYAKSHLGDTQGAIADYTK--AIEID 805
Query: 275 RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVH-DKLSSDSAS--------LNDSNTNS 325
+ + + N K+ + + G T+ T + D SD+ S L D+
Sbjct: 806 PKDAPTY--YNRGYAKSHLGDTQGAITDYTKAIEIDPKDSDAYSNRGYAKSHLGDTQGAI 863
Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF-- 383
Y+K+ D K +D+ +R ++K+ E + + + +K+ I+ +
Sbjct: 864 ADYTKAIEIDPKDADAYSNRG-------LVKD---EELGDHQGAIADYTKAIEINPQYSN 913
Query: 384 -RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+RG A+ Y AI+ + + ++ DP A RG A++ ++ + AI+D+++AI
Sbjct: 914 AYYNRGNAKSELKDYQEAIADYTKAIEIDPKDAPAYYNRGNAKSELKDYQEAIADYSKAI 973
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP A+ RG A+ + I D +KA+E +P A+ RG + A
Sbjct: 974 EINPQLALAYNNRGLAKYDSKDYQGTIADYNKAIEIDPQYANAYKNRGNAKKELGVLKGA 1033
Query: 503 VEDLSACVKLDKEN 516
ED +L E+
Sbjct: 1034 CEDWKKAAELGNED 1047
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 48/235 (20%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI DFT+AI+ +P+ + RG ++ LG+ AI D + AL P D+ RG+
Sbjct: 106 KGAIDDFTKAIEIDPNHAHPYYNRGFSKWQLGDIQGAIADYNHALAIYPLFKDVYFFRGM 165
Query: 492 VNFKFKDFNAAVEDLSACVKLD-------KENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ +F+ A+ D S +++D ++ SAY + G A S G A + KAI
Sbjct: 166 AKDQIGNFDGAIADYSKVIEIDPDQLYKYRDECSAYFHRGKAKHSSGNISGAIADYSKAI 225
Query: 545 QLDRNFLEAWGH------------LTQFYQDL--ANSEKALEC----------------- 573
++D A+ + L FY L A+ +KA++
Sbjct: 226 EIDPKNDSAYNNRGIIEDDLGQRKLDDFYYQLAIADYDKAIDINPSNADAYLNRGHTKLN 285
Query: 574 ----------LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
L ID + Y RG+ LG H+ AI D + + IDP +
Sbjct: 286 QRDFDGAIADFNHALNIDPQVDNIYLKRGVAKDELGNHQGAIADYTKAIEIDPQD 340
>gi|414078950|ref|YP_006998268.1| TPR repeat-containing serine protease [Anabaena sp. 90]
gi|413972366|gb|AFW96455.1| TPR repeat-containing serine protease [Anabaena sp. 90]
Length = 613
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 137/258 (53%), Gaps = 1/258 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF + +G+ + N+G AI +++ ++ +P + EA RG R+ + + AI+DF +A
Sbjct: 257 DFFI-QGVDKQNKGDNQGAIIAYNEAIRLNPSFAEAYSNRGGIRSNLGDKQGAIADFNQA 315
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ NP+ A+ RG R+ LG+ AIQD ++AL+ PN A + RG V + D
Sbjct: 316 LNFNPNDALAYYNRGGVRSELGDKQAAIQDYNQALKINPNDALAYYNRGGVRSELGDKQG 375
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++D + +K++ AY GLA S G+ + A + + +A++++ N+ A+ +
Sbjct: 376 AIQDYNQALKINPNYAEAYINRGLARSDSGDKQGAIQDYNQALKINPNYAYAYINRGLAR 435
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
D + + A+ Q + I+ AY+ RGL LG + AI+D + + I+P++ +
Sbjct: 436 YDSGDKQGAIADFNQAIKINPNDDYAYYNRGLARSNLGDKQAAIQDYNQAIKINPNDAQA 495
Query: 622 LYLRASCYHAIGEYREAV 639
R + A+G+ + A+
Sbjct: 496 YNNRGATRSALGDKQAAI 513
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 133/254 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G +AI ++Q LK +P A RG R+ + + AI D+ +A++ N
Sbjct: 328 NRGGVRSELGDKQAAIQDYNQALKINPNDALAYYNRGGVRSELGDKQGAIQDYNQALKIN 387
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG AR+ G+ AIQD ++AL+ PN A RG+ + D A+ D
Sbjct: 388 PNYAEAYINRGLARSDSGDKQGAIQDYNQALKINPNYAYAYINRGLARYDSGDKQGAIAD 447
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + AY GLA S++G+ + A + + +AI+++ N +A+ + L
Sbjct: 448 FNQAIKINPNDDYAYYNRGLARSNLGDKQAAIQDYNQAIKINPNDAQAYNNRGATRSALG 507
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A++ Q + I+ ++ AY+ RG LG + AI D + + I+P E Y R
Sbjct: 508 DKQAAIQDYNQAIKINPNYALAYNNRGNARSALGDKQGAITDFNQAININPKLAEPYYNR 567
Query: 626 ASCYHAIGEYREAV 639
+ A+G+ + A+
Sbjct: 568 GNARLALGDKQGAI 581
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G AI ++Q LK +P Y EA I RG AR+ + + AI D+ +A++ N
Sbjct: 362 NRGGVRSELGDKQGAIQDYNQALKINPNYAEAYINRGLARSDSGDKQGAIQDYNQALKIN 421
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR G+ AI D ++A++ PN + RG+ D AA++D
Sbjct: 422 PNYAYAYINRGLARYDSGDKQGAIADFNQAIKINPNDDYAYYNRGLARSNLGDKQAAIQD 481
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + AY G S++G+ + A + + +AI+++ N+ A+ + L
Sbjct: 482 YNQAIKINPNDAQAYNNRGATRSALGDKQAAIQDYNQAIKINPNYALAYNNRGNARSALG 541
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + A+ Q + I+ + ++ Y+ RG LG + AI DL
Sbjct: 542 DKQGAITDFNQAININPKLAEPYYNRGNARLALGDKQGAISDL 584
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 102/192 (53%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+A+ + G AI ++Q LK +P Y A I RG AR + + AI+DF +AI+
Sbjct: 395 INRGLARSDSGDKQGAIQDYNQALKINPNYAYAYINRGLARYDSGDKQGAIADFNQAIKI 454
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG AR+ LG+ AIQD ++A++ PN A + RG D AA++
Sbjct: 455 NPNDDYAYYNRGLARSNLGDKQAAIQDYNQAIKINPNDAQAYNNRGATRSALGDKQAAIQ 514
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +K++ AY G A S++G+ + A +AI ++ E + + L
Sbjct: 515 DYNQAIKINPNYALAYNNRGNARSALGDKQGAITDFNQAININPKLAEPYYNRGNARLAL 574
Query: 565 ANSEKALECLQQ 576
+ + A+ LQQ
Sbjct: 575 GDKQGAISDLQQ 586
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 2/137 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N G +AI ++Q +K +P +A RG R+ + +AAI D+ +AI+ N
Sbjct: 464 NRGLARSNLGDKQAAIQDYNQAIKINPNDAQAYNNRGATRSALGDKQAAIQDYNQAIKIN 523
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR+ALG+ AI D ++A+ P A+ + RG D A+ D
Sbjct: 524 PNYALAYNNRGNARSALGDKQGAITDFNQAININPKLAEPYYNRGNARLALGDKQGAISD 583
Query: 506 LSACVKLDKE--NKSAY 520
L L ++ N AY
Sbjct: 584 LQQAANLFQQQGNLGAY 600
>gi|118381868|ref|XP_001024094.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89305861|gb|EAS03849.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 850
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 132/252 (52%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q ++GK+ A++ + + ++ DP Y EA RG A + + AI ++ +A++ NP+
Sbjct: 10 GLTQQSQGKFQEAVNSYSKAIELDPQYTEAYCNRGVALNSLNQYQEAIKNYNKALEINPN 69
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ +G + AL + EAI +K +E +PN +G+ F F A+ + +
Sbjct: 70 YKLAYYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNLNQFQEALNNFN 129
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++ D + A + L+ +G+ ++A + KAI LD N+ A+ + Y +
Sbjct: 130 KALQCDPKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPNYKNAYLNRGLLYMNEGQK 189
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
++AL+ +Q++ ID +F+ AY GL L LGQ+++AI+ + ID + Y +A
Sbjct: 190 QQALQDFRQIIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQIDKNAFLAYYNKAI 249
Query: 628 CYHAIGEYREAV 639
+G+ +EA+
Sbjct: 250 LCKQLGKNQEAL 261
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 144/273 (52%), Gaps = 3/273 (1%)
Query: 370 VTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
+ +K+ I+ +++L+ +GI+ + AIS + ++++ DP Y +A + +G
Sbjct: 57 IKNYNKALEINPNYKLAYYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFF 116
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ + A+++F +A+Q +P A + LG+S +A+ KA+ +PN +
Sbjct: 117 NLNQFQEALNNFNKALQCDPKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPNYKNAY 176
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
RG++ A++D + +D + +AY +GL L +G+ ++A + + KAIQ+
Sbjct: 177 LNRGLLYMNEGQKQQALQDFRQIIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQI 236
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
D+N A+ + + L +++AL +V+ I+ +S AY +G L G++++AIK
Sbjct: 237 DKNAFLAYYNKAILCKQLGKNQEALNNYNKVIEINPNYSNAYLNKGSLFLFSGKYEEAIK 296
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + +DP++ + Y + A+G Y+E++
Sbjct: 297 NYDKVIQLDPNHKQVYYNKGISLKALGRYQESI 329
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 117/224 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ +NEG+ A+ F QI+ DP + A I G + + AI + +AIQ
Sbjct: 177 LNRGLLYMNEGQKQQALQDFRQIIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQI 236
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ +A A+ + LG++ EA+ + +K +E PN ++ +G + + A++
Sbjct: 237 DKNAFLAYYNKAILCKQLGKNQEALNNYNKVIEINPNYSNAYLNKGSLFLFSGKYEEAIK 296
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++LD +K Y G++L ++G Y+++ E + KAIQLD N + + + L
Sbjct: 297 NYDKVIQLDPNHKQVYYNKGISLKALGRYQESIENYNKAIQLDPNNCKIQNNKGLALEAL 356
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
S+ AL+C + + ID F+ +Y R L+ LG +A++D+
Sbjct: 357 GKSQDALDCYNKAIQIDPFFTLSYANRALVNFNLGNKDQAVEDM 400
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+ + + G + + G+ EA+ SKA+E +P + RG+ + A+++ +
Sbjct: 4 QKYHQAGLTQQSQGKFQEAVNSYSKAIELDPQYTEAYCNRGVALNSLNQYQEAIKNYNKA 63
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA-------WGHLTQFYQ 562
++++ K AY G++L ++ + ++A + K +++D N+ +A + +L QF +
Sbjct: 64 LEINPNYKLAYYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNLNQFQE 123
Query: 563 DLANSEKALEC---------------------LQQVLYIDK------RFSKAYHLRGLLL 595
L N KAL+C Q + Y DK + AY RGLL
Sbjct: 124 ALNNFNKALQCDPKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPNYKNAYLNRGLLY 183
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
GQ ++A++D + IDP +G+ +EA+
Sbjct: 184 MNEGQKQQALQDFRQIIAIDPKFTNAYINVGLTLQQLGQNQEAI 227
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 68/128 (53%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G + GKY AI +D++++ DP + + +G + + +I ++ +AIQ
Sbjct: 279 LNKGSLFLFSGKYEEAIKNYDKVIQLDPNHKQVYYNKGISLKALGRYQESIENYNKAIQL 338
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ + +G A ALG+S +A+ +KA++ +P R +VNF + + AVE
Sbjct: 339 DPNNCKIQNNKGLALEALGKSQDALDCYNKAIQIDPFFTLSYANRALVNFNLGNKDQAVE 398
Query: 505 DLSACVKL 512
D+ KL
Sbjct: 399 DMKQASKL 406
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++SKAI LD ++Y CNR + L ++ I++ +KAL+++P AY
Sbjct: 22 AVNSYSKAIE-LDPQYTEAY-----CNRGVALNSLNQYQEAIKNYNKALEINPNYKLAYY 75
Query: 108 LKGCAFSALGRKEEALSVWEKGYE-HALHQSADLKQ---FLELEELLTAAKQ-DRSVTCE 162
KG + AL + +EA+S + K E ++ A L + F L + A ++++ C+
Sbjct: 76 NKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNLNQFQEALNNFNKALQCD 135
Query: 163 -------YDVSNSMSSLTVSESGLNANDKMSETSENH 192
Y+++ S L S+ L DK N+
Sbjct: 136 PKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPNY 172
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLC--------SLRNWSKAIRILDSLL 63
+L + + I D+ +++D +A A A LC +L N++K I I +
Sbjct: 219 QLGQNQEAIQHYDKAIQIDK---NAFLAYYNKAILCKQLGKNQEALNNYNKVIEI-NPNY 274
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
+ +Y N+ + ++ I++ DK +QLDP Q Y KG + ALGR +E++
Sbjct: 275 SNAY-----LNKGSLFLFSGKYEEAIKNYDKVIQLDPNHKQVYYNKGISLKALGRYQESI 329
Query: 124 SVWEKG 129
+ K
Sbjct: 330 ENYNKA 335
>gi|225621427|ref|YP_002722686.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225216248|gb|ACN84982.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 453
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 132/249 (53%), Gaps = 9/249 (3%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K++S+D L ++G+ + G AI F++ +K +P Y A RG A+
Sbjct: 191 KALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGNAKDNLGLY 250
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI D+ +AI+ NP+ A+ RG A+ LG EAI+D KA+E PN D + RG
Sbjct: 251 EEAIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIELNPNYTDAYNNRGN 310
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + A++D +KL+ AY GL+ S+G Y++A + + KAI+L+ N
Sbjct: 311 AKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKISLGLYEEAIKDYDKAIKLEAN-- 368
Query: 552 EAWGHLTQFYQD--LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ + + + L E+AL+ + + +D ++ AY RG + LG K+++KD
Sbjct: 369 DAFAYCNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAYVYRGDTKYNLGLFKESVKDYE 428
Query: 610 SGLGIDPSN 618
+ L IDP+N
Sbjct: 429 TALLIDPNN 437
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 134/254 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GI + G+YA AI +D+ +K +P +A + A+ L+ AI ++ +AI+
Sbjct: 103 SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELR 162
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG ++ LG EAI+D KAL +PN D + +G++ + A++D
Sbjct: 163 ADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKD 222
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ AY G A ++G Y++A + + KAI+L+ N+ A+ + +L
Sbjct: 223 FNKAIKLNPNYALAYNNRGNAKDNLGLYEEAIKDYDKAIKLNPNYAFAYNNRGNAKDNLG 282
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+E + + ++ ++ AY+ RG + LG +++AIKD + ++P+ + R
Sbjct: 283 LYEEAIEDFDKAIELNPNYTDAYNNRGNAKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNR 342
Query: 626 ASCYHAIGEYREAV 639
++G Y EA+
Sbjct: 343 GLSKISLGLYEEAI 356
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 126/257 (49%), Gaps = 6/257 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR---AFQRELEAAISDFTEAI 442
+RG+ + + G AI FD+ L DP +A +G F +E AI DF +AI
Sbjct: 171 NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKE---AIKDFNKAI 227
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP+ A+ RG A+ LG EAI+D KA++ PN A + RG + A
Sbjct: 228 KLNPNYALAYNNRGNAKDNLGLYEEAIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEA 287
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ED ++L+ AY G A +G Y++A + + KAI+L+ N+ +A+ +
Sbjct: 288 IEDFDKAIELNPNYTDAYNNRGNAKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKI 347
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
L E+A++ + + ++ + AY RG LG H++A+KD + +D +
Sbjct: 348 SLGLYEEAIKDYDKAIKLEANDAFAYCNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAY 407
Query: 623 YLRASCYHAIGEYREAV 639
R + +G ++E+V
Sbjct: 408 VYRGDTKYNLGLFKESV 424
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 120/237 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++ IA+ G AI +D+ ++ Y A RG ++ LE AI DF +
Sbjct: 132 ADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDK 191
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ +P+ +A+ +G LG S EAI+D +KA++ PN A + RG +
Sbjct: 192 ALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGNAKDNLGLYE 251
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++D +KL+ AY G A ++G Y++A E KAI+L+ N+ +A+ +
Sbjct: 252 EAIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIELNPNYTDAYNNRGNA 311
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
DL E+A++ + + ++ ++ AY RGL LG +++AIKD + ++ +
Sbjct: 312 KYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKISLGLYEEAIKDYDKAIKLEAN 368
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G Y AI +D+ +K +P Y +A RG ++ E AI D+ +AI+
Sbjct: 307 NRGNAKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKISLGLYEEAIKDYDKAIKLE 366
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ RG A++ LG EA++D KA++ + N A RG + F +V+D
Sbjct: 367 ANDAFAYCNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAYVYRGDTKYNLGLFKESVKD 426
Query: 506 LSACVKLDKENKSA 519
+ +D N++A
Sbjct: 427 YETALLIDPNNETA 440
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDS 61
+++Y L + I + D+ ++++ A R L+K+ +++++ KAI+ L++
Sbjct: 310 NAKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNR-GLSKISLGLYEEAIKDYDKAIK-LEA 367
Query: 62 LLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
A +Y CNR F S L LH+ ++D DKA++LD AY+ +G LG +E
Sbjct: 368 NDAFAY-----CNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAYVYRGDTKYNLGLFKE 422
Query: 122 ALSVWEKGYEHAL 134
++ K YE AL
Sbjct: 423 SV----KDYETAL 431
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 18 KTICEIDELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDI 72
+ I DE ++++ MA A A+ +L L ++ + KAI + Y
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYY----- 170
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L L + I+D DKAL +DP L AY KG LG +EA+ + K
Sbjct: 171 -NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKA 226
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ KAI+ L+ A +Y NR L L++ I D DKA++L+P AY
Sbjct: 253 AIKDYDKAIK-LNPNYAFAYN-----NRGNAKDNLGLYEEAIEDFDKAIELNPNYTDAYN 306
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ ++K
Sbjct: 307 NRGNAKYDLGLYEEAIKDYDKA 328
>gi|193213585|ref|YP_001999538.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
gi|193087062|gb|ACF12338.1| Tetratricopeptide TPR_2 repeat protein [Chlorobaculum parvum NCIB
8327]
Length = 314
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 115/255 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RGI G Y AI +F Q L+ P EA RG AR+ +L AI D+T+ IQ
Sbjct: 34 VDRGIEIGQRGDYDGAIELFSQALRLSPNNAEAYYNRGLARSVIGDLNGAIDDYTQTIQR 93
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + EA+ RG RAALG EA+ D+S A+ EP A + + RG V ++ A+
Sbjct: 94 KPRSFEAYNNRGFTRAALGRYAEALVDISLAIAIEPKMAQLYNNRGAVRMSMSNYRGAIA 153
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S+ + LD AY GLA G+ + A+++D + AW +
Sbjct: 154 DFSSAIDLDPVLAGAYNNRGLARGLDGDLDGSIGDFTLAVRIDPRYTVAWYNRGNARVSK 213
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ + A+E +VL +D A + R LG H A+ DL + P + Y
Sbjct: 214 DDVQGAVEDYTKVLVLDPEMVAARNNRAFARLTLGDHAGALSDLDRVVEAFPDDATGWYN 273
Query: 625 RASCYHAIGEYREAV 639
R G+ A+
Sbjct: 274 RGVVRKVAGDRLGAI 288
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ +G +I F ++ DP Y A RG AR + +++ A+ D+T+ + +
Sbjct: 171 NRGLARGLDGDLDGSIGDFTLAVRIDPRYTVAWYNRGNARVSKDDVQGAVEDYTKVLVLD 230
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A R AR LG+ A+ DL + +E P+ A + RG+V D A+ D
Sbjct: 231 PEMVAARNNRAFARLTLGDHAGALSDLDRVVEAFPDDATGWYNRGVVRKVAGDRLGAIAD 290
Query: 506 LSACVKL 512
L+ +L
Sbjct: 291 LTRAAEL 297
>gi|220922402|ref|YP_002497704.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947009|gb|ACL57401.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 818
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 130/254 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ L+ +P YP A RG + E + AI+D+ +A++ N
Sbjct: 167 NRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLN 226
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + E AI D +AL +P A+I RG ++N A+ D
Sbjct: 227 PEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIAD 286
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD ++ AYT G A S GE +A + +A++ + + A+ + +++
Sbjct: 287 FDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKG 346
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ Q L +D + + AY+ RGL G++ +AI D L +DP + R
Sbjct: 347 EYDRAIADYTQALRLDPQSATAYNNRGLAFQDKGEYDRAIADYDQALRLDPKDAAAYTNR 406
Query: 626 ASCYHAIGEYREAV 639
+ ++ GE+ A+
Sbjct: 407 GAAFYRKGEHDRAI 420
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 126/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ L+ DP A RG A + E + AI+D+ +A++ +
Sbjct: 31 NRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLD 90
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A+ RG A GE AI D +AL +P A+I RG+ ++ +++ A+ D
Sbjct: 91 PKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIAD 150
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + YT G A S GEY +A + +A++ + + A+ + +Q
Sbjct: 151 YDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKG 210
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ Q L ++ + AY RGL ++ +AI D L +DP R
Sbjct: 211 EYDRAIADYDQALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYINR 270
Query: 626 ASCYHAIGEYREAV 639
+ + GEY A+
Sbjct: 271 GYAFRSKGEYNRAI 284
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 125/248 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A ++ +Y AI+ +DQ L+ DP Y I RG A + E AI+DF +A++ +P
Sbjct: 236 RGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDP 295
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG A + GE+ AI D +AL F P A RG +++ A+ D
Sbjct: 296 KSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADY 355
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD ++ +AY GLA GEY +A + +A++LD A+ + +
Sbjct: 356 TQALRLDPQSATAYNNRGLAFQDKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGE 415
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++A+ ++ L +D + + AY+ RG L+ G + +AI DL L + P Y R
Sbjct: 416 HDRAIADYEEALRLDPKSAAAYNGRGAALNKKGDYDRAIADLDQALRLKPGFTNPHYHRG 475
Query: 627 SCYHAIGE 634
+ G+
Sbjct: 476 MAFRHKGD 483
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 127/250 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A ++G+Y AI+ FDQ L+ DP A GRG A + E + AI+D+ +A++
Sbjct: 268 INRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRF 327
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A++ RG A GE AI D ++AL +P SA + RG+ +++ A+
Sbjct: 328 NPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQSATAYNNRGLAFQDKGEYDRAIA 387
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD ++ +AYT G A GE+ +A + +A++LD A+
Sbjct: 388 DYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEALRLDPKSAAAYNGRGAALNKK 447
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ ++A+ L Q L + F+ ++ RG+ G +A+ DL+ + ++P +
Sbjct: 448 GDYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALADLNEAVRLNPKYADAYQE 507
Query: 625 RASCYHAIGE 634
R + A GE
Sbjct: 508 RGVTFQARGE 517
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 119/253 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A +G+Y AI+ +DQ L+ DP Y I RG A + E + AI+D+ +A++ +
Sbjct: 100 RGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQALRLDL 159
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A + GE AI D +AL F P RG +++ A+ D
Sbjct: 160 RDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADY 219
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ E+ +AYT+ GLA S EY +A + +A++LD + + + ++
Sbjct: 220 DQALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYAFRSKGE 279
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+ Q L +D + AY RG G++ +AI D L +P R
Sbjct: 280 YNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRG 339
Query: 627 SCYHAIGEYREAV 639
+ GEY A+
Sbjct: 340 DAFRNKGEYDRAI 352
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 122/255 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+A +G+Y AI+ +DQ L+ D RG A + E + AI+D+ +A++
Sbjct: 132 INRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRF 191
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A++ RG + GE AI D +AL P A RG+ +++ A+
Sbjct: 192 NPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLNPEDAAAYTHRGLAFQSKSEYDRAIA 251
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD + + Y G A S GEY +A +A++LD + A+ ++
Sbjct: 252 DYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSK 311
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+++A+ Q L + +++ AY RG G++ +AI D + L +DP +
Sbjct: 312 GENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQSATAYNN 371
Query: 625 RASCYHAIGEYREAV 639
R + GEY A+
Sbjct: 372 RGLAFQDKGEYDRAI 386
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 119/231 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG A ++G+ AI+ +DQ L+ +P Y A RG A + E + AI+D+T+A++ +
Sbjct: 303 GRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLD 362
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A+ RG A GE AI D +AL +P A RG ++ + + A+ D
Sbjct: 363 PQSATAYNNRGLAFQDKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIAD 422
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD ++ +AY G AL+ G+Y +A +A++L F H ++
Sbjct: 423 YEEALRLDPKSAAAYNGRGAALNKKGDYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKG 482
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ ++AL L + + ++ +++ AY RG+ G+ +A+ DL+ + + P
Sbjct: 483 DLDRALADLNEAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVRLKP 533
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 117/248 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A +G+Y AI+ +DQ L+ DP A RG A + E + AI+D+ +A++ +P
Sbjct: 66 RGLAFYRKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDP 125
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A GE AI D +AL + A + RG +++ A+ D
Sbjct: 126 KYANIYINRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADY 185
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + + AY G S GEY +A + +A++L+ A+ H +Q +
Sbjct: 186 DQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLNPEDAAAYTHRGLAFQSKSE 245
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++A+ Q L +D +++ Y RG G++ +AI D L +DP ++ R
Sbjct: 246 YDRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRG 305
Query: 627 SCYHAIGE 634
+ + GE
Sbjct: 306 DAFRSKGE 313
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 133/561 (23%), Positives = 233/561 (41%), Gaps = 81/561 (14%)
Query: 18 KTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSYEIQDI 72
+ I + D+ +R+D A A T R + + ++ ++ +A+R LD A +Y
Sbjct: 44 RAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALR-LDPKSAVAY----- 97
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG-YE 131
+R + + + I D D+AL+LDP YI +G AF + KG Y+
Sbjct: 98 THRGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAF------------YRKGEYD 145
Query: 132 HALHQSADLKQFLELEELLTAAKQDRSVTC----EYDVSNSMSSLTVSESGLNANDKMSE 187
A+ AD Q L L+ +R EYD ++ + L N K
Sbjct: 146 RAI---ADYDQALRLDLRDAVVYTNRGDAFRSKGEYD-----RAIADYDQALRFNPKYPY 197
Query: 188 TSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKL 247
N + SK +D + + D+A L +N +
Sbjct: 198 AYRNRGDT--------------FQSKGEYDRAIAD--YDQA------------LRLNPE- 228
Query: 248 REVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDV 307
+ H G + SKS + R ++ ++ D N I++ G D
Sbjct: 229 DAAAYTHRGLAFQSKSEY-DRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADF 287
Query: 308 HDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKK 367
L D S+ +++ +D +D ++ + + K+ +A RNK
Sbjct: 288 DQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQA-LRFNPKYAYAYRNRGDAFRNKG 346
Query: 368 FCVTRISK-SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
I+ ++++ +D + + RG+A ++G+Y AI+ +DQ L+ DP A R
Sbjct: 347 EYDRAIADYTQALRLDPQSATAYNNRGLAFQDKGEYDRAIADYDQALRLDPKDAAAYTNR 406
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A + E + AI+D+ EA++ +P + A+ RG A G+ AI DL +AL +P
Sbjct: 407 GAAFYRKGEHDRAIADYEEALRLDPKSAAAYNGRGAALNKKGDYDRAIADLDQALRLKPG 466
Query: 482 SADILHERGIVNFKFK-DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK----- 535
+ + RG+ F+ K D + A+ DL+ V+L+ + AY G+ + GE +
Sbjct: 467 FTNPHYHRGMA-FRHKGDLDRALADLNEAVRLNPKYADAYQERGVTFQARGESDRALADL 525
Query: 536 AEEAHLKA-IQLDRNFLEAWG 555
AE LK ++ D FL+ G
Sbjct: 526 AEAVRLKPELEADATFLKVRG 546
>gi|428320555|ref|YP_007118437.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428244235|gb|AFZ10021.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 838
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 123/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A VN G+ AI+ +D+ L+ P Y EA RG A E AI+ + EA++
Sbjct: 521 NRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRREDAIASWDEALKFK 580
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG +AI +AL+F+P+ + + RG+ A+
Sbjct: 581 PDLHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNRGLALVNLGRREDAIAS 640
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KL + A+ LG+ L +G + A ++ KA+++ ++ EAW + +L
Sbjct: 641 YGKALKLKPDFHEAWYNLGVVLHDLGRIEDAIASYDKALEIKPDYHEAWFNQGVVLHNLG 700
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + L + +A++ RGL L LG+ ++AI L P E Y+R
Sbjct: 701 RFEEAIASFGKALKFKADYHEAWYSRGLALVNLGRFEEAITSWDEALKFKPDKHEAWYIR 760
Query: 626 ASCYHAIGEYREAV 639
+ +G + EA+
Sbjct: 761 GLVLYNLGRFEEAI 774
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 138/298 (46%), Gaps = 13/298 (4%)
Query: 355 LKETSNEAKRNKKFCVTRIS----------KSKSISVDFR---LSRGIAQVNEGKYASAI 401
+K +EA N+ + + + K+ I D+ +RG+A VN G+ AI
Sbjct: 511 IKPDDHEAWNNRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRREDAI 570
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+ +D+ LK P EA RG A E AI+ + EA++ P EAW RG A
Sbjct: 571 ASWDEALKFKPDLHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNRGLALVN 630
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG +AI KAL+ +P+ + + G+V A+ +++ + A+
Sbjct: 631 LGRREDAIASYGKALKLKPDFHEAWYNLGVVLHDLGRIEDAIASYDKALEIKPDYHEAWF 690
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G+ L ++G +++A + KA++ ++ EAW +L E+A+ + L
Sbjct: 691 NQGVVLHNLGRFEEAIASFGKALKFKADYHEAWYSRGLALVNLGRFEEAITSWDEALKFK 750
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+A+++RGL+L+ LG+ ++AI L P E Y+R + +G +EA+
Sbjct: 751 PDKHEAWYIRGLVLYNLGRFEEAIASYDKALKFKPDKHEAWYIRGLALYNLGRIKEAI 808
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 123/253 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A N G++ AI+ D+ L+ P E RG A LE AI+ + +A++ P
Sbjct: 183 RGLALGNLGRFEEAIASCDKALEIKPDLHEVWNNRGRALDDLGRLEDAIASYDKALKFKP 242
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG A LG +AI KAL+F+P+ ++ + RG+ F A+
Sbjct: 243 DKHEAWSSRGLALVKLGRLQDAIASYDKALKFKPDKHEVWNIRGLALDDLGRFEEAIASY 302
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+K + A+ GLAL ++G ++A + KA+++ + E W + DL
Sbjct: 303 DKALKFKPDLHEAWYIRGLALYNLGRREEAIASWDKALEIKPDLHEVWYNRGYALDDLGR 362
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+AL + L + + +A++ RGLLLH LG+ ++A+ + L + P E R
Sbjct: 363 FEEALTSYNKALELKPDYHEAWNNRGLLLHNLGRFEEALTSYNKALELKPDYHEAWNNRG 422
Query: 627 SCYHAIGEYREAV 639
+ +G EA+
Sbjct: 423 NALDKLGRIEEAI 435
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 114/240 (47%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ +D+ L+ P EA RG A +E AI+ + +A++ P EAW RG A
Sbjct: 501 AIASYDKALEIKPDDHEAWNNRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVAL 560
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG +AI +AL+F+P+ + + RG+ A+ +K + A
Sbjct: 561 VNLGRREDAIASWDEALKFKPDLHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEA 620
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ GLAL ++G + A ++ KA++L +F EAW +L DL E A+ + L
Sbjct: 621 WYNRGLALVNLGRREDAIASYGKALKLKPDFHEAWYNLGVVLHDLGRIEDAIASYDKALE 680
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I + +A+ +G++LH LG+ ++AI L E Y R +G + EA+
Sbjct: 681 IKPDYHEAWFNQGVVLHNLGRFEEAIASFGKALKFKADYHEAWYSRGLALVNLGRFEEAI 740
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 143/654 (21%), Positives = 260/654 (39%), Gaps = 104/654 (15%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
L + I D+ ++ A ++R + L KL L++ AI D L + +
Sbjct: 224 LGRLEDAIASYDKALKFKPDKHEAWSSRGLALVKLGRLQD---AIASYDKALKFKPDKHE 280
Query: 72 ICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
+ N R L + I DKAL+ P L +A+ ++G A LGR+EEA++ W+K
Sbjct: 281 VWNIRGLALDDLGRFEEAIASYDKALKFKPDLHEAWYIRGLALYNLGRREEAIASWDKAL 340
Query: 131 E--HALHQSA--------DLKQFLELEELLTAAKQDRSVTCEY-DVSNS----MSSLTVS 175
E LH+ DL +F EE LT+ + + +Y + N+ + +L
Sbjct: 341 EIKPDLHEVWYNRGYALDDLGRF---EEALTSYNKALELKPDYHEAWNNRGLLLHNLGRF 397
Query: 176 ESGLNANDKMSETSENH-----NKSDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEAK 229
E L + +K E ++ N+ + D + + + K+ PD ++
Sbjct: 398 EEALTSYNKALELKPDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRG- 456
Query: 230 GGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASR--------DASEINRQSSDDF 281
+ L G+L E +++ + + H + + I +S D
Sbjct: 457 ---------NALRNLGRLEEAIASYDKALEIKPDYHEAWNNRVLLLDNLGRIEAIASYDK 507
Query: 282 DICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSIS---DNKS 338
+ P D + N R G + + ++S +L E++ ++ +
Sbjct: 508 ALEIKPDDHEAWNNR-GYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRR 566
Query: 339 SDSTESRSK-LSFKWDMLKETSNEAKRNKKFCVTRISK------SKSISVDFR------- 384
D+ S + L FK D+ +EA N+ + + + S ++ F+
Sbjct: 567 EDAIASWDEALKFKPDL-----HEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAW 621
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A VN G+ AI+ + + LK P + EA G +E AI+ + +A++
Sbjct: 622 YNRGLALVNLGRREDAIASYGKALKLKPDFHEAWYNLGVVLHDLGRIEDAIASYDKALEI 681
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW +G LG EAI KAL+F+ + + + RG+ F A+
Sbjct: 682 KPDYHEAWFNQGVVLHNLGRFEEAIASFGKALKFKADYHEAWYSRGLALVNLGRFEEAIT 741
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K + A+ GL L ++G +++A ++ KA++ + EAW
Sbjct: 742 SWDEALKFKPDKHEAWYIRGLVLYNLGRFEEAIASYDKALKFKPDKHEAW---------- 791
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++RGL L+ LG+ K+AI L I P +
Sbjct: 792 ------------------------YIRGLALYNLGRIKEAIASYDKALEIKPDD 821
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + G++ AI+ +D+ LK P EA RG A E AI+ + +A++ P
Sbjct: 285 RGLALDDLGRFEEAIASYDKALKFKPDLHEAWYIRGLALYNLGRREEAIASWDKALEIKP 344
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E W RG A LG EA+ +KALE +P+ + + RG++ F A+
Sbjct: 345 DLHEVWYNRGYALDDLGRFEEALTSYNKALELKPDYHEAWNNRGLLLHNLGRFEEALTSY 404
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L + A+ G AL +G ++A ++ KA++L ++ EAW + ++L
Sbjct: 405 NKALELKPDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRGNALRNLGR 464
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A+ + L I + +A++ R LLL LG+ +AI L I P + E R
Sbjct: 465 LEEAIASYDKALEIKPDYHEAWNNRVLLLDNLGR-IEAIASYDKALEIKPDDHEAWNNRG 523
Query: 627 SCYHAIGEYREAV 639
+G EA+
Sbjct: 524 YALVNLGRIEEAI 536
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G+ AI+ +D+ LK P EA RG A L+ AI+ + +A++
Sbjct: 216 NRGRALDDLGRLEDAIASYDKALKFKPDKHEAWSSRGLALVKLGRLQDAIASYDKALKFK 275
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W RG A LG EAI KAL+F+P+ + + RG+ + A+
Sbjct: 276 PDKHEVWNIRGLALDDLGRFEEAIASYDKALKFKPDLHEAWYIRGLALYNLGRREEAIAS 335
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + + G AL +G +++A ++ KA++L ++ EAW + +L
Sbjct: 336 WDKALEIKPDLHEVWYNRGYALDDLGRFEEALTSYNKALELKPDYHEAWNNRGLLLHNLG 395
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+AL + L + + +A++ RG L LG+ ++AI L + P E R
Sbjct: 396 RFEEALTSYNKALELKPDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNR 455
Query: 626 ASCYHAIGEYREAV 639
+ +G EA+
Sbjct: 456 GNALRNLGRLEEAI 469
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 120/274 (43%), Gaps = 4/274 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T +K+ + D+ + RG A G+ AI+ +D+ L+ P Y EA RG A
Sbjct: 400 ALTSYNKALELKPDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRGNAL 459
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
LE AI+ + +A++ P EAW R LG +EAI KALE +P+ +
Sbjct: 460 RNLGRLEEAIASYDKALEIKPDYHEAWNNRVLLLDNLGR-IEAIASYDKALEIKPDDHEA 518
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG A+ +++ + A+ G+AL ++G + A + +A++
Sbjct: 519 WNNRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRREDAIASWDEALK 578
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ EAW + +L E A+ + L +A++ RGL L LG+ + AI
Sbjct: 579 FKPDLHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNRGLALVNLGRREDAI 638
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + P E Y H +G +A+
Sbjct: 639 ASYGKALKLKPDFHEAWYNLGVVLHDLGRIEDAI 672
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 1/254 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G++ A++ +++ L+ P Y EA RG E A++ + +A++
Sbjct: 352 NRGYALDDLGRFEEALTSYNKALELKPDYHEAWNNRGLLLHNLGRFEEALTSYNKALELK 411
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI KALE +P+ + + RG A+
Sbjct: 412 PDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRGNALRNLGRLEEAIAS 471
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ L L ++G +A ++ KA+++ + EAW + +L
Sbjct: 472 YDKALEIKPDYHEAWNNRVLLLDNLGRI-EAIASYDKALEIKPDDHEAWNNRGYALVNLG 530
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + L I + +A++ RG+ L LG+ + AI L P E Y R
Sbjct: 531 RIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNR 590
Query: 626 ASCYHAIGEYREAV 639
+G +A+
Sbjct: 591 GVALVNLGRREDAI 604
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 3/166 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I D+ ++G+ N G++ AI+ F + LK Y EA RG A
Sbjct: 671 AIASYDKALEIKPDYHEAWFNQGVVLHNLGRFEEAIASFGKALKFKADYHEAWYSRGLAL 730
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI+ + EA++ P EAW RG LG EAI KAL+F+P+ +
Sbjct: 731 VNLGRFEEAITSWDEALKFKPDKHEAWYIRGLVLYNLGRFEEAIASYDKALKFKPDKHEA 790
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ RG+ + A+ +++ ++ A +AL +G
Sbjct: 791 WYIRGLALYNLGRIKEAIASYDKALEIKPDDHLASKNRTIALKKLG 836
>gi|333997950|ref|YP_004530562.1| hypothetical protein TREPR_2517 [Treponema primitia ZAS-2]
gi|333738980|gb|AEF84470.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
Length = 349
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 136/267 (50%), Gaps = 6/267 (2%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S++ D L+RGI + +Y AI ++Q ++ +P Y EA RG + E A++D
Sbjct: 30 SLNYDEYLNRGIIFADRKEYDRAIGYYNQAIRLNPYYAEAYNNRGVVYVIKGEYTWAMAD 89
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+TEAI+ + A+ RG +G+ A D + A+ +PN A RG ++ +
Sbjct: 90 YTEAIRLKQNYTFAYNNRGLLFTEIGDYERARNDFTMAITMDPNYAKAYRNRGEIHLRKG 149
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+++ A+ D + V+L A+ G A ++ GEY KA + +AI+++ N++EA +
Sbjct: 150 EYDQAILDFNQAVRLSPGYAKAFGSRGDAYANKGEYDKAVADYNQAIRINPNYVEALINR 209
Query: 558 TQFYQDLANSEKALECLQQVLYID----KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
Y D+ ++A +V+ I+ +AY RG+ + G + KAI D + +
Sbjct: 210 GNIYYDVGYPDRAKVDYDRVISINLNAGPDLPRAYSNRGVAYNNRGDYGKAIADYNEAIK 269
Query: 614 IDPSNIECLYL-RASCYHAIGEYREAV 639
++P N+ Y R + Y IGEYR A+
Sbjct: 270 LNP-NLALAYRHRGAVYANIGEYRLAI 295
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 113/234 (48%), Gaps = 4/234 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G Y A + F + DP Y +A RG + E + AI DF +A++ +
Sbjct: 106 NRGLLFTEIGDYERARNDFTMAITMDPNYAKAYRNRGEIHLRKGEYDQAILDFNQAVRLS 165
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG A A GE +A+ D ++A+ PN + L RG + + + A D
Sbjct: 166 PGYAKAFGSRGDAYANKGEYDKAVADYNQAIRINPNYVEALINRGNIYYDVGYPDRAKVD 225
Query: 506 LSACVKLD----KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
+ ++ + AY+ G+A ++ G+Y KA + +AI+L+ N A+ H Y
Sbjct: 226 YDRVISINLNAGPDLPRAYSNRGVAYNNRGDYGKAIADYNEAIKLNPNLALAYRHRGAVY 285
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
++ A++ + + I+ ++ AY RG L LG++ +A D + I+
Sbjct: 286 ANIGEYRLAIDDFNRAIEINPNYATAYISRGKALSYLGEYAQAQIDYHQAVRIN 339
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 4/173 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A N+G+Y A++ ++Q ++ +P Y EALI RG + A D+ I N
Sbjct: 174 SRGDAYANKGEYDKAVADYNQAIRINPNYVEALINRGNIYYDVGYPDRAKVDYDRVISIN 233
Query: 446 PSAGE----AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+AG A+ RG A G+ +AI D ++A++ PN A RG V ++
Sbjct: 234 LNAGPDLPRAYSNRGVAYNNRGDYGKAIADYNEAIKLNPNLALAYRHRGAVYANIGEYRL 293
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A++D + ++++ +AY G ALS +GEY +A+ + +A++++ + E +
Sbjct: 294 AIDDFNRAIEINPNYATAYISRGKALSYLGEYAQAQIDYHQAVRINTKYGEIY 346
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G Y AI+ +++ +K +P A RG A E AI DF AI+ N
Sbjct: 246 NRGVAYNNRGDYGKAIADYNEAIKLNPNLALAYRHRGAVYANIGEYRLAIDDFNRAIEIN 305
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
P+ A+ RG+A + LGE +A D +A+ +I +R
Sbjct: 306 PNYATAYISRGKALSYLGEYAQAQIDYHQAVRINTKYGEIYDKR 349
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 61/128 (47%)
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
D N Y G+ + EY +A + +AI+L+ + EA+ + Y A+
Sbjct: 29 DSLNYDEYLNRGIIFADRKEYDRAIGYYNQAIRLNPYYAEAYNNRGVVYVIKGEYTWAMA 88
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+ + + + ++ AY+ RGLL +G +++A D + + +DP+ + R +
Sbjct: 89 DYTEAIRLKQNYTFAYNNRGLLFTEIGDYERARNDFTMAITMDPNYAKAYRNRGEIHLRK 148
Query: 633 GEYREAVI 640
GEY +A++
Sbjct: 149 GEYDQAIL 156
>gi|225620899|ref|YP_002722157.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215719|gb|ACN84453.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 952
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 139/266 (52%), Gaps = 4/266 (1%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
SK++ V F RG+++ +Y +I F++I+K +P E+ RG ++A + E +I
Sbjct: 244 SKNVEVYF--YRGVSKAKLERYEESIVDFNEIIKLNPKNVESYFNRGVSKAKLEKYEESI 301
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
DF E I+ NP E++ RG ++A L + EAI D + A++ PN + G+
Sbjct: 302 VDFNEVIKLNPKNVESYFNRGVSKAKLEKYEEAIADFNNAIKLNPNDEKVYFASGLAKAD 361
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ + ++ D + +KL+ +N AY Y G+A + + Y+++ + I+LD +EA+
Sbjct: 362 LERYEESIVDFNEVIKLNSKNVEAYFYRGVAKADLERYEESIVDFNEVIKLDPKNVEAYF 421
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ L E+++ +V+ + KAY RGL L ++KKAI D + + ++
Sbjct: 422 YRGVSKAKLEKYEESIIDFNEVITFNPNDEKAYFNRGLSKAQLERYKKAIVDFNKVIKLN 481
Query: 616 PSNIECLYL-RASCYHAIGEYREAVI 640
P N E YL R + + +Y EA++
Sbjct: 482 PKN-EIAYLARGISNYELKKYEEAIV 506
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 130/258 (50%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG+A+ Y AI F++ ++ + E+ RG A+A + E AI DF ++
Sbjct: 78 DAYFFRGLAKTELKLYEEAIEDFNESIELNLKNWESYFARGIAKANLKLYEEAIEDFNKS 137
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP +A+ RG ++A L + E+I D +K +E P + RG K K +
Sbjct: 138 IELNPKNEKAYFNRGISKAKLKKYEESIVDFNKVIELNPKNEKAYFNRGFAKAKLKKYEK 197
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
++ D + +KLD +N Y Y G++ + + Y+++ AI+LD +E + +
Sbjct: 198 SIVDFNNAIKLDSKNVEVYFYRGISKAKLERYEESIVDFNNAIKLDSKNVEVYFYRGVSK 257
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
L E+++ +++ ++ + ++Y RG+ L +++++I D + + ++P N+E
Sbjct: 258 AKLERYEESIVDFNEIIKLNPKNVESYFNRGVSKAKLEKYEESIVDFNEVIKLNPKNVES 317
Query: 622 LYLRASCYHAIGEYREAV 639
+ R + +Y EA+
Sbjct: 318 YFNRGVSKAKLEKYEEAI 335
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 128/256 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ ++ Y AI F++ + + +A RG A+ + E AI DF E+I+
Sbjct: 47 FNRGLEKIESKLYEEAIKYFNKTIGLNQKNRDAYFFRGLAKTELKLYEEAIEDFNESIEL 106
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N E++ RG A+A L EAI+D +K++E P + RGI K K + ++
Sbjct: 107 NLKNWESYFARGIAKANLKLYEEAIEDFNKSIELNPKNEKAYFNRGISKAKLKKYEESIV 166
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ +N+ AY G A + + +Y+K+ AI+LD +E + + L
Sbjct: 167 DFNKVIELNPKNEKAYFNRGFAKAKLKKYEKSIVDFNNAIKLDSKNVEVYFYRGISKAKL 226
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+++ + +D + + Y RG+ L +++++I D + + ++P N+E +
Sbjct: 227 ERYEESIVDFNNAIKLDSKNVEVYFYRGVSKAKLERYEESIVDFNEIIKLNPKNVESYFN 286
Query: 625 RASCYHAIGEYREAVI 640
R + +Y E+++
Sbjct: 287 RGVSKAKLEKYEESIV 302
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 135/265 (50%), Gaps = 2/265 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
SK++ V F RGI++ +Y +I F+ +K D E RG ++A E +I
Sbjct: 210 SKNVEVYF--YRGISKAKLERYEESIVDFNNAIKLDSKNVEVYFYRGVSKAKLERYEESI 267
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
DF E I+ NP E++ RG ++A L + E+I D ++ ++ P + + RG+ K
Sbjct: 268 VDFNEIIKLNPKNVESYFNRGVSKAKLEKYEESIVDFNEVIKLNPKNVESYFNRGVSKAK 327
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ + A+ D + +KL+ ++ Y GLA + + Y+++ + I+L+ +EA+
Sbjct: 328 LEKYEEAIADFNNAIKLNPNDEKVYFASGLAKADLERYEESIVDFNEVIKLNSKNVEAYF 387
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ DL E+++ +V+ +D + +AY RG+ L +++++I D + + +
Sbjct: 388 YRGVAKADLERYEESIVDFNEVIKLDPKNVEAYFYRGVSKAKLEKYEESIIDFNEVITFN 447
Query: 616 PSNIECLYLRASCYHAIGEYREAVI 640
P++ + + R + Y++A++
Sbjct: 448 PNDEKAYFNRGLSKAQLERYKKAIV 472
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 136/260 (52%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V+ +RG+++ KY +I F++++K +P E+ RG ++A + E AI+DF
Sbjct: 280 NVESYFNRGVSKAKLEKYEESIVDFNEVIKLNPKNVESYFNRGVSKAKLEKYEEAIADFN 339
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AI+ NP+ + + G A+A L E+I D ++ ++ + + RG+ + +
Sbjct: 340 NAIKLNPNDEKVYFASGLAKADLERYEESIVDFNEVIKLNSKNVEAYFYRGVAKADLERY 399
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
++ D + +KLD +N AY Y G++ + + +Y+++ + I + N +A+ +
Sbjct: 400 EESIVDFNEVIKLDPKNVEAYFYRGVSKAKLEKYEESIIDFNEVITFNPNDEKAYFNRGL 459
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
L +KA+ +V+ ++ + AY RG+ + L ++++AI D + + ++P+N
Sbjct: 460 SKAQLERYKKAIVDFNKVIKLNPKNEIAYLARGISNYELKKYEEAIVDFNKAIKLNPNNE 519
Query: 620 ECLYLRASCYHAIGEYREAV 639
E + R + +Y++A+
Sbjct: 520 ESYFNRGILKIHLKKYKQAI 539
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 138/257 (53%), Gaps = 2/257 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA+ N Y AI F++ ++ +P +A RG ++A ++ E +I DF + I+
Sbjct: 115 FARGIAKANLKLYEEAIEDFNKSIELNPKNEKAYFNRGISKAKLKKYEESIVDFNKVIEL 174
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP +A+ RG A+A L + ++I D + A++ + + ++ RGI K + + ++
Sbjct: 175 NPKNEKAYFNRGFAKAKLKKYEKSIVDFNNAIKLDSKNVEVYFYRGISKAKLERYEESIV 234
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +KLD +N Y Y G++ + + Y+++ + I+L+ +E++ + L
Sbjct: 235 DFNNAIKLDSKNVEVYFYRGVSKAKLERYEESIVDFNEIIKLNPKNVESYFNRGVSKAKL 294
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+++ +V+ ++ + ++Y RG+ L ++++AI D ++ + ++P N E +Y
Sbjct: 295 EKYEESIVDFNEVIKLNPKNVESYFNRGVSKAKLEKYEEAIADFNNAIKLNP-NDEKVYF 353
Query: 625 RASCYHA-IGEYREAVI 640
+ A + Y E+++
Sbjct: 354 ASGLAKADLERYEESIV 370
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 138/290 (47%), Gaps = 34/290 (11%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGI++ KY +I F+++++ +P +A RG A+A ++ E +I DF AI+
Sbjct: 149 FNRGISKAKLKKYEESIVDFNKVIELNPKNEKAYFNRGFAKAKLKKYEKSIVDFNNAIKL 208
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG------------IV 492
+ E + RG ++A L E+I D + A++ + + ++ RG IV
Sbjct: 209 DSKNVEVYFYRGISKAKLERYEESIVDFNNAIKLDSKNVEVYFYRGVSKAKLERYEESIV 268
Query: 493 NF----------------------KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
+F K + + ++ D + +KL+ +N +Y G++ + +
Sbjct: 269 DFNEIIKLNPKNVESYFNRGVSKAKLEKYEESIVDFNEVIKLNPKNVESYFNRGVSKAKL 328
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+Y++A AI+L+ N + + DL E+++ +V+ ++ + +AY
Sbjct: 329 EKYEEAIADFNNAIKLNPNDEKVYFASGLAKADLERYEESIVDFNEVIKLNSKNVEAYFY 388
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
RG+ L +++++I D + + +DP N+E + R + +Y E++I
Sbjct: 389 RGVAKADLERYEESIVDFNEVIKLDPKNVEAYFYRGVSKAKLEKYEESII 438
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V+ RG+++ KY +I F++++ +P +A RG ++A + AI DF
Sbjct: 416 NVEAYFYRGVSKAKLEKYEESIIDFNEVITFNPNDEKAYFNRGLSKAQLERYKKAIVDFN 475
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ I+ NP A+ RG + L + EAI D +KA++ PN+ + RGI+ K +
Sbjct: 476 KVIKLNPKNEIAYLARGISNYELKKYEEAIVDFNKAIKLNPNNEESYFNRGILKIHLKKY 535
Query: 500 NAAVEDLSACVK 511
A+ D K
Sbjct: 536 KQAINDFKIFAK 547
>gi|75910689|ref|YP_324985.1| hypothetical protein Ava_4492 [Anabaena variabilis ATCC 29413]
gi|75704414|gb|ABA24090.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 605
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 9/262 (3%)
Query: 387 RGIAQVNEGK-YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RGI E K Y AI+ F+ ++ +P Y +A RG AR + AAI+D+ +A+Q N
Sbjct: 42 RGITFSRELKDYQGAIAFFNLAVEINPNYAQAYYHRGNARYCLADFTAAIADYDQALQIN 101
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--------NSADILHERGIVNFKFK 497
P+ E + RG A A G+ +AI + +EF+P + A+ + RG+ N
Sbjct: 102 PTFAEYYYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRGLHNSDHG 161
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
++ A+ DL ++ +AY+ G +GEY++A H +A+QLD N EA+ +
Sbjct: 162 NYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNR 221
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
Y L +KA+ + L I+ AY+ RGL+ L ++++A D + L +
Sbjct: 222 GNAYYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLNEYQQAFADFNQVLSFNSK 281
Query: 618 NIECLYLRASCYHAIGEYREAV 639
+ + Y R Y A +Y+ A+
Sbjct: 282 DAQAYYQRGLIYEAWQDYQSAL 303
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 116/246 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + G Y AI Q L+ P + A RG E AI+D A+Q +P
Sbjct: 153 RGLHNSDHGNYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDP 212
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA++ RG A ALG +AI D ++ LE P+ + RG+++F ++ A D
Sbjct: 213 NLAEAYQNRGNAYYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLNEYQQAFADF 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + ++ AY GL + +Y+ A + +A+QL+ +G ++ L +
Sbjct: 273 NQVLSFNSKDAQAYYQRGLIYEAWQDYQSALADYNQALQLNPELAVVYGVRANIHRHLGD 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
AL ++L + F+ Y RG LG ++ AI D + L I+P+ E Y RA
Sbjct: 333 YPSALADGNRLLQLQPNFAAGYCDRGTSRRCLGDYRGAITDYNQALQINPNIAEAYYGRA 392
Query: 627 SCYHAI 632
+ A+
Sbjct: 393 IAHEAL 398
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 116/222 (52%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG ++ G Y AI+ ++Q L+ +P EA GR A ++L AI+D+T +I+ +P
Sbjct: 357 RGTSRRCLGDYRGAITDYNQALQINPNIAEAYYGRAIAHEALQDLIGAIADYTHSIRISP 416
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG AR LG++ A+ D ++AL ++ + RG +++ +++ +A+ D
Sbjct: 417 DFAPAYCNRGNARRQLGDTKGALADYNQALTINTQLSEAYYNRGSLHYDQQNYRSAIADY 476
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L E+ Y+ A ++ +Y+ A + ++I ++ + E W + + Y L
Sbjct: 477 TQALELQPESARYYSDRAHARYALQDYQGAVADYTQSIAINPGYAEDWYNRGRSYLLLGY 536
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+AL L Q L ++ AY LR +L G ++ AI D
Sbjct: 537 LEEALADLNQALKFQPHWASAYLLRADILRNRGDYQAAITDF 578
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 121/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +Y A + F+Q+L + +A RG ++ ++A++D+ +A+Q N
Sbjct: 254 NRGLISFYLNEYQQAFADFNQVLSFNSKDAQAYYQRGLIYEAWQDYQSALADYNQALQLN 313
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + R LG+ A+ D ++ L+ +PN A +RG D+ A+ D
Sbjct: 314 PELAVVYGVRANIHRHLGDYPSALADGNRLLQLQPNFAAGYCDRGTSRRCLGDYRGAITD 373
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY +A ++ + A + +I++ +F A+ + + L
Sbjct: 374 YNQALQINPNIAEAYYGRAIAHEALQDLIGAIADYTHSIRISPDFAPAYCNRGNARRQLG 433
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+++ AL Q L I+ + S+AY+ RG L + ++ AI D + L + P + R
Sbjct: 434 DTKGALADYNQALTINTQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDR 493
Query: 626 ASCYHAIGEYREAV 639
A +A+ +Y+ AV
Sbjct: 494 AHARYALQDYQGAV 507
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G Y AI+ +++ L+ +P A RG + E + A +DF + + N
Sbjct: 220 NRGNAYYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLNEYQQAFADFNQVLSFN 279
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ +RG A + A+ D ++AL+ P A + R ++ D+ +A+ D
Sbjct: 280 SKDAQAYYQRGLIYEAWQDYQSALADYNQALQLNPELAVVYGVRANIHRHLGDYPSALAD 339
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + Y G + +G+Y+ A + +A+Q++ N EA+ ++ L
Sbjct: 340 GNRLLQLQPNFAAGYCDRGTSRRCLGDYRGAITDYNQALQINPNIAEAYYGRAIAHEALQ 399
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A+ + I F+ AY RG LG K A+ D + L I+ E Y R
Sbjct: 400 DLIGAIADYTHSIRISPDFAPAYCNRGNARRQLGDTKGALADYNQALTINTQLSEAYYNR 459
Query: 626 ASCYHAIGEYREAV 639
S ++ YR A+
Sbjct: 460 GSLHYDQQNYRSAI 473
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 100/230 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG G+Y AI+ ++ ++ DP EA RG A + AI+D+ ++ NP
Sbjct: 187 RGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAYYALGAYQKAIADYNRTLEINP 246
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG L E +A D ++ L F A ++RG++ ++D+ +A+ D
Sbjct: 247 HQVGAYYNRGLISFYLNEYQQAFADFNQVLSFNSKDAQAYYQRGLIYEAWQDYQSALADY 306
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L+ E Y +G+Y A + +QL NF + + L +
Sbjct: 307 NQALQLNPELAVVYGVRANIHRHLGDYPSALADGNRLLQLQPNFAAGYCDRGTSRRCLGD 366
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
A+ Q L I+ ++AY+ R + L AI D + + I P
Sbjct: 367 YRGAITDYNQALQINPNIAEAYYGRAIAHEALQDLIGAIADYTHSIRISP 416
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 19/149 (12%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++++++ +LS RG ++ Y SAI+ + Q L+ P R AR ++
Sbjct: 443 NQALTINTQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQD 502
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN-------SA 483
+ A++D+T++I NP E W RG++ LG EA+ DL++AL+F+P+ A
Sbjct: 503 YQGAVADYTQSIAINPGYAEDWYNRGRSYLLLGYLEEALADLNQALKFQPHWASAYLLRA 562
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKL 512
DIL RG D+ AA+ D L
Sbjct: 563 DILRNRG-------DYQAAITDFQKSADL 584
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDP 412
+ ++EA ++ + + S IS DF +RG A+ G A++ ++Q L +
Sbjct: 391 RAIAHEALQDLIGAIADYTHSIRISPDFAPAYCNRGNARRQLGDTKGALADYNQALTINT 450
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
EA RG+ Q+ +AI+D+T+A++ P + + R AR AL + A+ D
Sbjct: 451 QLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQDYQGAVADY 510
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++++ P A+ + RG A+ DL+ +K SAY L + G+
Sbjct: 511 TQSIAINPGYAEDWYNRGRSYLLLGYLEEALADLNQALKFQPHWASAYLLRADILRNRGD 570
Query: 533 YKKA 536
Y+ A
Sbjct: 571 YQAA 574
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
R Y +L ++ I D ++A+QLDP L +AY +G A+ ALG ++A++ + + E
Sbjct: 187 RGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAYYALGAYQKAIADYNRTLEINP 246
Query: 135 HQ 136
HQ
Sbjct: 247 HQ 248
>gi|445062480|ref|ZP_21374862.1| hypothetical protein H263_03666 [Brachyspira hampsonii 30599]
gi|444506126|gb|ELV06506.1| hypothetical protein H263_03666 [Brachyspira hampsonii 30599]
Length = 365
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 135/254 (53%), Gaps = 4/254 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A+ N +Y AI +D ++ P RG A+ E E AI D++ +I+ P
Sbjct: 84 GVAKYNLEEYEEAIKDYDICIERLPKADYVYCNRGDAKCQLGEYEEAIEDYSRSIELKPK 143
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + RG A+ L + EAI+D K++E +P +RG V + K +N A+EDL+
Sbjct: 144 NADYYYFRGLAKNKLKKYEEAIKDFDKSIELKPKDPYYYSDRGYVKYALKQYNEAIEDLN 203
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLA 565
+KL+ + Y GL S +GE ++A + + KAI+L+ +F+EA+ + +Q+ L
Sbjct: 204 KAIKLNPKEADYYNSRGLVKSDLGENEEAIKDYNKAIELNTSFIEAYQNRAFSQY--KLK 261
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N +A++ + + ++ + Y+ RG + + L ++ AI+D + + I+P + R
Sbjct: 262 NYNEAIKDCNKSIELNSFDNYVYNFRGAVKNKLEDYQGAIEDFNKSIEINPFYAKPYLRR 321
Query: 626 ASCYHAIGEYREAV 639
+ +G+Y++A+
Sbjct: 322 GDVKYNLGQYKDAL 335
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 128/265 (48%), Gaps = 4/265 (1%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
E EA ++ C+ R+ K+ + +RG A+ G+Y AI + + ++ P +
Sbjct: 91 EEYEEAIKDYDICIERLPKADYVYC----NRGDAKCQLGEYEEAIEDYSRSIELKPKNAD 146
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
RG A+ ++ E AI DF ++I+ P + RG + AL + EAI+DL+KA+
Sbjct: 147 YYYFRGLAKNKLKKYEEAIKDFDKSIELKPKDPYYYSDRGYVKYALKQYNEAIEDLNKAI 206
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ P AD + RG+V + A++D + ++L+ AY + + Y +A
Sbjct: 207 KLNPKEADYYNSRGLVKSDLGENEEAIKDYNKAIELNTSFIEAYQNRAFSQYKLKNYNEA 266
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ K+I+L+ + L + + A+E + + I+ ++K Y RG + +
Sbjct: 267 IKDCNKSIELNSFDNYVYNFRGAVKNKLEDYQGAIEDFNKSIEINPFYAKPYLRRGDVKY 326
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIEC 621
LGQ+K A++D + + +D S E
Sbjct: 327 NLGQYKDALEDYNKCIELDDSYTEA 351
>gi|431806833|ref|YP_007233731.1| hypothetical protein BPP43_00580 [Brachyspira pilosicoli P43/6/78]
gi|430780192|gb|AGA65476.1| tetratricopeptide repeat-containing protein [Brachyspira pilosicoli
P43/6/78]
Length = 352
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 157/302 (51%), Gaps = 4/302 (1%)
Query: 321 SNTNSESYSKSSISDNKSSDSTESRSK-LSFKWDMLKETSNEAKRNKKFCVTRISKSKSI 379
+N ++E+YS ++++ E +K +S K + +N NK+ + R++
Sbjct: 39 NNIDAENYSDFDDFNDRAKAFNEELNKIMSDKKHFIVSFTNIVDNNKEVDIDRLNNLTDY 98
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D+ S+GI + G+YA AI +D+ +K +P +A + A+ L+ AI ++
Sbjct: 99 H-DYN-SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYD 156
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ A+ RG ++ LG EAI+D KAL +PN D + +G++ +
Sbjct: 157 KAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFS 216
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++D + +KL+ AY G+A ++G Y++A + + KAI+L+ N+ A+ +
Sbjct: 217 KEAIKDFNKAIKLNPNYALAYNNRGIAKDNLGLYEEAIKDYNKAIKLNPNYAFAYNNRGN 276
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+L E+A+E + + ++ + AY+ RG LG +++A+KD L +DPSN
Sbjct: 277 AKDNLGLYEEAIEDFDKAIKLNPDYVDAYNNRGFTKENLGLYEEALKDYKKALELDPSN- 335
Query: 620 EC 621
EC
Sbjct: 336 EC 337
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 424 ARAFQRELEAAISD-------FTEAIQSNPSAG----------EAWKRRGQARAALGESV 466
A+AF EL +SD FT + +N + +G ++A GE
Sbjct: 56 AKAFNEELNKIMSDKKHFIVSFTNIVDNNKEVDIDRLNNLTDYHDYNSKGIYKSANGEYA 115
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ +A++ PN AD + + I K A+E+ ++L + AY GL
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYYNRGLL 175
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
S +G ++A + KA+ +D N +A+ + +L S++A++ + + ++ ++
Sbjct: 176 KSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYAL 235
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY+ RG+ LG +++AIKD + + ++P+ R + +G Y EA+
Sbjct: 236 AYNNRGIAKDNLGLYEEAIKDYNKAIKLNPNYAFAYNNRGNAKDNLGLYEEAI 288
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K++S+D L ++G+ + G AI F++ +K +P Y A RG A+
Sbjct: 191 KALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGIAKDNLGLY 250
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI D+ +AI+ NP+ A+ RG A+ LG EAI+D KA++ P+ D + RG
Sbjct: 251 EEAIKDYNKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDAYNNRGF 310
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ A++D ++LD N+ A
Sbjct: 311 TKENLGLYEEALKDYKKALELDPSNECA 338
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 19 TICEIDELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDIC 73
I DE ++++ MA A A+ +L L ++ + KAI + Y
Sbjct: 117 AIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYY------ 170
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L L + I+D DKAL +DP L AY KG LG +EA+ + K
Sbjct: 171 NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKA 226
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI+ L+ A +Y NR L L++ I D DKA++L+P + AY
Sbjct: 253 AIKDYNKAIK-LNPNYAFAYN-----NRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDAYN 306
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G LG EEAL ++K E
Sbjct: 307 NRGFTKENLGLYEEALKDYKKALE 330
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI+ L+ A +Y NR L L++ I+D +KA++L+P AY
Sbjct: 219 AIKDFNKAIK-LNPNYALAYN-----NRGIAKDNLGLYEEAIKDYNKAIKLNPNYAFAYN 272
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ ++K
Sbjct: 273 NRGNAKDNLGLYEEAIEDFDKA 294
>gi|300870119|ref|YP_003784990.1| hypothetical protein BP951000_0486 [Brachyspira pilosicoli 95/1000]
gi|300687818|gb|ADK30489.1| hypothetical protein BP951000_0486 [Brachyspira pilosicoli 95/1000]
Length = 616
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 130/242 (53%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A+ N G + AI ++++++ DP +A RG ++ + + + AI DF +
Sbjct: 194 DAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLQLFDEAIKDFNKI 253
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P+ A+ RG ++ LG EAI+D +KA+E PN +D + RG + F
Sbjct: 254 LELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKE 313
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ED +K + N + Y G A + Y++A + + K I+LD N+++A+ +
Sbjct: 314 AIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAK 373
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
++L +++++ + +Y++ +S AY+ RGL LG +++AIKD + + N E
Sbjct: 374 RELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEA 433
Query: 622 LY 623
Y
Sbjct: 434 YY 435
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 134/254 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+ G+A N G Y AI + + + Y A RG AR+ + AI D+ +AI+ +
Sbjct: 130 TNGVALNNMGSYQYAIDKYSEAIDLIDYYALAYYNRGLARSNLGFFKKAIKDYDKAIELS 189
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG A+ G EAI+D +K +E +PN+ D + RG+ + F+ A++D
Sbjct: 190 KNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLQLFDEAIKD 249
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ N AY+ G + + +G YK+A E + KAI+++ N+ +A+ + ++L
Sbjct: 250 FNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELG 309
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+E + + Y RG + L +++AIKD + +D + ++ Y R
Sbjct: 310 LFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNR 369
Query: 626 ASCYHAIGEYREAV 639
A+ +G Y+E++
Sbjct: 370 ANAKRELGLYKESI 383
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 143/294 (48%), Gaps = 34/294 (11%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D +RG+++ + AI F++IL+ +P A RG ++ + AI D+
Sbjct: 226 NIDAYNNRGVSKNYLQLFDEAIKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYN 285
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ NP+ +A+ RG ++ LG EAI+D A+++EPN+ + RG + + +
Sbjct: 286 KAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELY 345
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++D +KLD AY A +G YK++ + + KAI L+ N+ +A+ +
Sbjct: 346 EEAIKDYDKIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGL 405
Query: 560 FYQDLANSEKALECLQQ----------------------------VLYIDK------RFS 585
DL E+A++ ++ + Y DK +S
Sbjct: 406 AKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYS 465
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AY+ RGL + LG +K+A+KD + ++P++ R +++G Y+EA+
Sbjct: 466 EAYNNRGLSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAI 519
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 126/258 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG ++ G + AI +D +K +P + RG A+ E AI D+ +
Sbjct: 296 DAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKI 355
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ + + +A+ R A+ LG E+I+D KA+ PN +D + RG+ +
Sbjct: 356 IKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEE 415
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++D + L +N AY +G A + K++ + + KAI+L + EA+ +
Sbjct: 416 AIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLSK 475
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
DL ++AL+ + + ++ S Y+ RGL + LG +K+AIKD + + + P
Sbjct: 476 NDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPDYTNA 535
Query: 622 LYLRASCYHAIGEYREAV 639
R S +G+Y+EA+
Sbjct: 536 YGNRGSAKDELGQYQEAI 553
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 122/247 (49%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+I K + VD +R A+ G Y +I +D+ + +P Y +A RG A++
Sbjct: 354 KIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMY 413
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI D+ E+I EA+ G A+ L E+I+ KA+E P ++ + RG+
Sbjct: 414 EEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGL 473
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A++D ++L+ + + Y GL S+G YK+A + + KAI+L ++
Sbjct: 474 SKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPDYT 533
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+G+ +L ++A+E + + ++ + Y+ RG + G +K+A KD
Sbjct: 534 NAYGNRGSAKDELGQYQEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEAFKDYKKA 593
Query: 612 LGIDPSN 618
L +DP+N
Sbjct: 594 LELDPNN 600
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 126/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N G + AI +D+ ++ Y +A RG A+ + AI D+ + I+ +
Sbjct: 164 NRGLARSNLGFFKKAIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELD 223
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG ++ L EAI+D +K LE EPN+ RG + A+ED
Sbjct: 224 PNNIDAYNNRGVSKNYLQLFDEAIKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIED 283
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY G + +G +K+A E + AI+ + N + + + DL
Sbjct: 284 YNKAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLE 343
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A++ +++ +D + AY+ R LG +K++IKD + ++P+ + R
Sbjct: 344 LYEEAIKDYDKIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNR 403
Query: 626 ASCYHAIGEYREAV 639
+G Y EA+
Sbjct: 404 GLAKSDLGMYEEAI 417
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 134/265 (50%), Gaps = 10/265 (3%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL---EAAIS 436
+++ L+RG A+ + Y AI +D+I+K D Y +A R A+ REL + +I
Sbjct: 328 NINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAK---RELGLYKESIK 384
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D+ +AI NP+ +A+ RG A++ LG EAI+D ++++ ++ + + G +
Sbjct: 385 DYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDL 444
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+++ ++L AY GL+ + +G YK+A + + K+I+L+ N + +
Sbjct: 445 DLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEALKDYDKSIELNPNDSNTYNN 504
Query: 557 --LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
LT++ L ++A++ + + + ++ AY RG LGQ+++AI+D + +
Sbjct: 505 RGLTKY--SLGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYQEAIEDYDKAIEL 562
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
+P+ R G Y+EA
Sbjct: 563 EPNTAYLYNDRGWVKKNAGLYKEAF 587
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ + G Y A+ +D+ ++ +P RG + + AI D+T+AI+
Sbjct: 470 NRGLSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELT 529
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ LG+ EAI+D KA+E EPN+A + ++RG V + A +D
Sbjct: 530 PDYTNAYGNRGSAKDELGQYQEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEAFKD 589
Query: 506 LSACVKLDKENKSA 519
++LD N+ A
Sbjct: 590 YKKALELDPNNEYA 603
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ K I+ LD+ +Y NRA +L L+K I+D DKA+ L+P AY
Sbjct: 348 AIKDYDKIIK-LDTNYVDAY-----YNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYN 401
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
+G A S LG EEA+ K YE ++ AD
Sbjct: 402 NRGLAKSDLGMYEEAI----KDYEESIDLCAD 429
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 52 WSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
+ KAI+ D + S +D NR F + LHK I D +K ++LDP + AY +G
Sbjct: 175 FKKAIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRG 234
Query: 111 CAFSALGRKEEALSVWEK 128
+ + L +EA+ + K
Sbjct: 235 VSKNYLQLFDEAIKDFNK 252
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR L L+K I+D KA++L P AY +G A LG+ +EA+ ++K E
Sbjct: 504 NRGLTKYSLGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYQEAIEDYDKAIE 561
>gi|431806834|ref|YP_007233732.1| hypothetical protein BPP43_00585 [Brachyspira pilosicoli P43/6/78]
gi|430780193|gb|AGA65477.1| hypothetical protein BPP43_00585 [Brachyspira pilosicoli P43/6/78]
Length = 616
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 136/258 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A+ N G + AI ++++++ DP +A RG ++ + + AI DF +
Sbjct: 194 DAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLELFDEAIKDFNKI 253
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P+ A+ RG ++ LG EAI+D +KA+E PN +D + RG + F
Sbjct: 254 LELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKE 313
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ED +K + N + Y G A + Y++A + + K I+LD N+++A+ +
Sbjct: 314 AIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAK 373
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
++L +++++ + +Y++ +S AY+ RGL LG +++AIKD + + N E
Sbjct: 374 RELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEA 433
Query: 622 LYLRASCYHAIGEYREAV 639
Y S + + +E++
Sbjct: 434 YYNIGSAKYDLDLLKESI 451
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 134/254 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+ G+A N +Y AI + + + Y A RG AR+ + AI D+ +AI+ +
Sbjct: 130 TNGVALNNMREYRDAIDYYSKAIDLIDYYALAYYNRGLARSNLGFFKKAIKDYDKAIELS 189
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG A+ G EAI+D +K +E +PN+ D + RG+ + F+ A++D
Sbjct: 190 KNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLELFDEAIKD 249
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ N AY+ G + + +G YK+A E + KAI+++ N+ +A+ + ++L
Sbjct: 250 FNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELG 309
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+E + + Y RG + L +++AIKD + +D + ++ Y R
Sbjct: 310 LFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNR 369
Query: 626 ASCYHAIGEYREAV 639
A+ +G Y+E++
Sbjct: 370 ANAKRELGLYKESI 383
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 142/294 (48%), Gaps = 34/294 (11%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D +RG+++ + AI F++IL+ +P A RG ++ + AI D+
Sbjct: 226 NIDAYNNRGVSKNYLELFDEAIKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYN 285
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ NP+ +A+ RG ++ LG EAI+D A+++EPN+ + RG + + +
Sbjct: 286 KAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELY 345
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++D +KLD AY A +G YK++ + + KAI L+ N+ +A+ +
Sbjct: 346 EEAIKDYDKIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGL 405
Query: 560 FYQDLANSEKALECLQQ----------------------------VLYIDK------RFS 585
DL E+A++ ++ + Y DK +S
Sbjct: 406 AKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYS 465
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AY+ RGL + LG +K+A+KD + ++P + R +++G Y+EA+
Sbjct: 466 EAYNNRGLSKNDLGLYKEALKDYDKSIELNPDDSNTYNNRGLTKYSLGLYKEAI 519
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 126/258 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG ++ G + AI +D +K +P + RG A+ E AI D+ +
Sbjct: 296 DAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKI 355
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ + + +A+ R A+ LG E+I+D KA+ PN +D + RG+ +
Sbjct: 356 IKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEE 415
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++D + L +N AY +G A + K++ + + KAI+L + EA+ +
Sbjct: 416 AIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLSK 475
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
DL ++AL+ + + ++ S Y+ RGL + LG +K+AIKD + + + P
Sbjct: 476 NDLGLYKEALKDYDKSIELNPDDSNTYNNRGLTKYSLGLYKEAIKDYTKAIKLTPDYTNA 535
Query: 622 LYLRASCYHAIGEYREAV 639
R S +G+Y+EA+
Sbjct: 536 YGNRGSAKDELGQYKEAI 553
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 124/247 (50%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+I K + VD +R A+ G Y +I +D+ + +P Y +A RG A++
Sbjct: 354 KIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMY 413
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI D+ E+I EA+ G A+ L E+I+ KA+E P ++ + RG+
Sbjct: 414 EEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGL 473
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A++D ++L+ ++ + Y GL S+G YK+A + + KAI+L ++
Sbjct: 474 SKNDLGLYKEALKDYDKSIELNPDDSNTYNNRGLTKYSLGLYKEAIKDYTKAIKLTPDYT 533
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+G+ +L ++A+E + + ++ + Y+ RG + G +K+A+KD
Sbjct: 534 NAYGNRGSAKDELGQYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKDYKKA 593
Query: 612 LGIDPSN 618
L +DP+N
Sbjct: 594 LELDPNN 600
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 126/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N G + AI +D+ ++ Y +A RG A+ + AI D+ + I+ +
Sbjct: 164 NRGLARSNLGFFKKAIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELD 223
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG ++ L EAI+D +K LE EPN+ RG + A+ED
Sbjct: 224 PNNIDAYNNRGVSKNYLELFDEAIKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIED 283
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY G + +G +K+A E + AI+ + N + + + DL
Sbjct: 284 YNKAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLE 343
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A++ +++ +D + AY+ R LG +K++IKD + ++P+ + R
Sbjct: 344 LYEEAIKDYDKIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNR 403
Query: 626 ASCYHAIGEYREAV 639
+G Y EA+
Sbjct: 404 GLAKSDLGMYEEAI 417
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 135/265 (50%), Gaps = 10/265 (3%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL---EAAIS 436
+++ L+RG A+ + Y AI +D+I+K D Y +A R A+ REL + +I
Sbjct: 328 NINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAK---RELGLYKESIK 384
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D+ +AI NP+ +A+ RG A++ LG EAI+D ++++ ++ + + G +
Sbjct: 385 DYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDL 444
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+++ ++L AY GL+ + +G YK+A + + K+I+L+ + + +
Sbjct: 445 DLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEALKDYDKSIELNPDDSNTYNN 504
Query: 557 --LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
LT++ L ++A++ + + + ++ AY RG LGQ+K+AI+D + +
Sbjct: 505 RGLTKY--SLGLYKEAIKDYTKAIKLTPDYTNAYGNRGSAKDELGQYKEAIEDYDKAIEL 562
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
+P+ R G Y+EA+
Sbjct: 563 EPNTAYLYNDRGWVKKNAGLYKEAL 587
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 73/134 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ + G Y A+ +D+ ++ +P RG + + AI D+T+AI+
Sbjct: 470 NRGLSKNDLGLYKEALKDYDKSIELNPDDSNTYNNRGLTKYSLGLYKEAIKDYTKAIKLT 529
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ LG+ EAI+D KA+E EPN+A + ++RG V + A++D
Sbjct: 530 PDYTNAYGNRGSAKDELGQYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKD 589
Query: 506 LSACVKLDKENKSA 519
++LD N+ A
Sbjct: 590 YKKALELDPNNEYA 603
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ K I+ LD+ +Y NRA +L L+K I+D DKA+ L+P AY
Sbjct: 348 AIKDYDKIIK-LDTNYVDAY-----YNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYN 401
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
+G A S LG EEA+ K YE ++ AD
Sbjct: 402 NRGLAKSDLGMYEEAI----KDYEESIDLCAD 429
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 52 WSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
+ KAI+ D + S +D NR F + LHK I D +K ++LDP + AY +G
Sbjct: 175 FKKAIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRG 234
Query: 111 CAFSALGRKEEALSVWEK 128
+ + L +EA+ + K
Sbjct: 235 VSKNYLELFDEAIKDFNK 252
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR L L+K I+D KA++L P AY +G A LG+ +EA+ ++K E
Sbjct: 504 NRGLTKYSLGLYKEAIKDYTKAIKLTPDYTNAYGNRGSAKDELGQYKEAIEDYDKAIE 561
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 52 WSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGC 111
+SKAI ++D Y NR S L K I+D DKA++L AY +G
Sbjct: 148 YSKAIDLIDYYALAYY------NRGLARSNLGFFKKAIKDYDKAIELSKNYKDAYYNRGF 201
Query: 112 AFSALGRKEEALSVWEK 128
A + G +EA+ + K
Sbjct: 202 AKNNAGLHKEAIEDYNK 218
>gi|158337072|ref|YP_001518247.1| hypothetical protein AM1_3945 [Acaryochloris marina MBIC11017]
gi|158307313|gb|ABW28930.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 594
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 16/291 (5%)
Query: 365 NKKFCVTRISKSKSISVDFR----------------LSRGIAQVNEGKYASAISIFDQIL 408
N+ + T + SKS D+ L+RG+A Y +A+ F+Q+L
Sbjct: 264 NRGYAHTVLGNSKSAIADYTKVIQLNPKNIELTKIYLNRGLAFAAAKNYPAALQDFNQVL 323
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ D PEA + RG A A AAI D+ + I+ P + A+ RG A + +G++ A
Sbjct: 324 QRDAKNPEAYLNRGRAHAASGNHLAAIQDYGQVIKFQPKSALAYFNRGVAYSKVGDNATA 383
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ D SKAL+ +P A L+ RG+V + A+ D +A +++D + +AY G A
Sbjct: 384 LADYSKALQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHL 443
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
G + A +AI + A+ + + +E A+ QVL +D +F+ AY
Sbjct: 444 KAGNTEAAIADFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIADYSQVLKLDPKFAAAY 503
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG L G A+KD S + +P N RA + A+ +Y EA+
Sbjct: 504 TNRGNLHAAQGDRDAALKDYSQAIEANPENATAYNNRALIHSALRQYEEAL 554
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 127/293 (43%), Gaps = 38/293 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G+ + +G + AI +D+ ++ + Y A + RG A ++AI+D+T+ IQ
Sbjct: 229 LRQGVEKYGKGNFKGAIQDYDKAIQINGNYALAYVNRGYAHTVLGNSKSAIADYTKVIQL 288
Query: 445 NP-------------------------------------SAGEAWKRRGQARAALGESVE 467
NP EA+ RG+A AA G +
Sbjct: 289 NPKNIELTKIYLNRGLAFAAAKNYPAALQDFNQVLQRDAKNPEAYLNRGRAHAASGNHLA 348
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AIQD + ++F+P SA RG+ K D A+ D S ++LD + +A GL
Sbjct: 349 AIQDYGQVIKFQPKSALAYFNRGVAYSKVGDNATALADYSKALQLDPKYAAALYNRGLVQ 408
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ G + A +IQ+D + A+ + + N+E A+ Q + + + A
Sbjct: 409 LNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTLA 468
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
Y+ RG+ GQ++ AI D S L +DP R + + A G+ R+A +
Sbjct: 469 YYNRGIAHSTAGQNEAAIADYSQVLKLDPKFAAAYTNRGNLHAAQGD-RDAAL 520
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 4/198 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A G A+A++ + + L+ DP Y AL RG + Q + AI+DFT +IQ
Sbjct: 368 FNRGVAYSKVGDNATALADYSKALQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQM 427
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL--HERGIVNFKFKDFNAA 502
+ A+K RG A G + AI D ++A+ F N+ D L + RGI + AA
Sbjct: 428 DTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITF--NAEDTLAYYNRGIAHSTAGQNEAA 485
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D S +KLD + +AYT G ++ G+ A + + +AI+ + A+ + +
Sbjct: 486 IADYSQVLKLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANPENATAYNNRALIHS 545
Query: 563 DLANSEKALECLQQVLYI 580
L E+AL QQ I
Sbjct: 546 ALRQYEEALSDYQQAAKI 563
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 378 SISVDFRLS-----RGIAQVNEGKYASAISIFDQILK---EDPMYPEALIGRGTARAFQR 429
SI +D + + RG A + G +AI+ F Q + ED + A RG A +
Sbjct: 424 SIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTL---AYYNRGIAHSTAG 480
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ EAAI+D+++ ++ +P A+ RG AA G+ A++D S+A+E P +A + R
Sbjct: 481 QNEAAIADYSQVLKLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANPENATAYNNR 540
Query: 490 GIVNFKFKDFNAAVEDLSACVKL 512
+++ + + A+ D K+
Sbjct: 541 ALIHSALRQYEEALSDYQQAAKI 563
>gi|220922903|ref|YP_002498205.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219947510|gb|ACL57902.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 784
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 129/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ L+ +P Y A RG A + E + AI+D+ A++ N
Sbjct: 133 NRGDAFRSKGEYDRAIADYDQALRFNPKYAYAYRNRGDAFQSKGEYDRAIADYDHALRLN 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + E AI D +AL F+P A+I RG ++N A+ D
Sbjct: 193 PEDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIAD 252
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD ++ AYT G A S GE +A + +A++ + + A+ + +++
Sbjct: 253 FDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKG 312
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ L +D + + AY+ RGL G++ +AI D L +DP + R
Sbjct: 313 EYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIADYDQALRLDPKDAAAYTNR 372
Query: 626 ASCYHAIGEYREAV 639
+ ++ GE+ A+
Sbjct: 373 GAAFYRKGEHDRAI 386
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 123/237 (51%), Gaps = 2/237 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A ++ +Y AI+ +DQ L+ DP Y I RG A + E AI+DF +A++ +P
Sbjct: 202 RGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDP 261
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG A + GE+ AI D +AL F P A RG +++ A+ D
Sbjct: 262 KSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADY 321
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++LD ++ +AY GLA + GEY +A + +A++LD A+ + +
Sbjct: 322 DHALRLDPKSATAYNNRGLAFQNKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGE 381
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP--SNIEC 621
++A+ + L +D + + AY+ RG L+ G++ +AI DL L + P +N C
Sbjct: 382 HDRAIADYDEALRLDPKSAAAYNGRGAALNKKGEYDRAIADLDQALRLKPGFANPYC 438
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 119/253 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A +G+Y AI+ +DQ L+ DP Y I RG A + E + AI+D+ +A++ +
Sbjct: 66 RGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQALRLDL 125
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A + GE AI D +AL F P A RG +++ A+ D
Sbjct: 126 RDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYAYAYRNRGDAFQSKGEYDRAIADY 185
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ E+ +AYT+ GLA S EY +A + +A++ D + + + ++
Sbjct: 186 DHALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGE 245
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+ Q L +D + AY RG G++ +AI D L +P R
Sbjct: 246 YNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRG 305
Query: 627 SCYHAIGEYREAV 639
+ GEY A+
Sbjct: 306 DAFRNKGEYDRAI 318
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 122/250 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A ++G+Y AI+ FDQ L+ DP A GRG A + E + AI+D+ +A++
Sbjct: 234 INRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRF 293
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A++ RG A GE AI D AL +P SA + RG+ +++ A+
Sbjct: 294 NPKYAYAYRNRGDAFRNKGEYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIA 353
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD ++ +AYT G A GE+ +A + +A++LD A+
Sbjct: 354 DYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYDEALRLDPKSAAAYNGRGAALNKK 413
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ L Q L + F+ Y RG G +A+ +L+ + ++P +
Sbjct: 414 GEYDRAIADLDQALRLKPGFANPYCHRGTAFRHKGDLDRALAELNEAVRLNPKYADAYQE 473
Query: 625 RASCYHAIGE 634
R + A GE
Sbjct: 474 RGVTFQARGE 483
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 120/255 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+A +G+Y AI+ +DQ L+ D RG A + E + AI+D+ +A++
Sbjct: 98 INRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRF 157
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A++ RG A + GE AI D AL P A RG+ +++ A+
Sbjct: 158 NPKYAYAYRNRGDAFQSKGEYDRAIADYDHALRLNPEDAAAYTHRGLAFQSKSEYDRAIA 217
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++ D + + Y G A S GEY +A +A++LD + A+ ++
Sbjct: 218 DYDQALRFDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSK 277
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+++A+ Q L + +++ AY RG G++ +AI D L +DP +
Sbjct: 278 GENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYDHALRLDPKSATAYNN 337
Query: 625 RASCYHAIGEYREAV 639
R + GEY A+
Sbjct: 338 RGLAFQNKGEYDRAI 352
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 118/231 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG A ++G+ AI+ +DQ L+ +P Y A RG A + E + AI+D+ A++ +
Sbjct: 269 GRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYDHALRLD 328
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A+ RG A GE AI D +AL +P A RG ++ + + A+ D
Sbjct: 329 PKSATAYNNRGLAFQNKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIAD 388
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD ++ +AY G AL+ GEY +A +A++L F + H ++
Sbjct: 389 YDEALRLDPKSAAAYNGRGAALNKKGEYDRAIADLDQALRLKPGFANPYCHRGTAFRHKG 448
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ ++AL L + + ++ +++ AY RG+ G+ +A+ DL+ + + P
Sbjct: 449 DLDRALAELNEAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVRLKP 499
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 117/249 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ L+ DP A RG A + E + AI+D+ +A++ +
Sbjct: 31 NRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLD 90
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG A GE AI D +AL + A + RG +++ A+ D
Sbjct: 91 PKYANIYINRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIAD 150
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + + AY G A S GEY +A + A++L+ A+ H +Q +
Sbjct: 151 YDQALRFNPKYAYAYRNRGDAFQSKGEYDRAIADYDHALRLNPEDAAAYTHRGLAFQSKS 210
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ Q L D +++ Y RG G++ +AI D L +DP ++ R
Sbjct: 211 EYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGR 270
Query: 626 ASCYHAIGE 634
+ + GE
Sbjct: 271 GDAFRSKGE 279
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 127/520 (24%), Positives = 218/520 (41%), Gaps = 56/520 (10%)
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
A + + D NR + + I D D+AL+LDP AY +G AF
Sbjct: 21 AYALDATDYYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAF---------- 70
Query: 124 SVWEKG-YEHALHQSADLKQFLELEELLTAAKQDRSVTC----EYD--VSNSMSSLTVSE 176
+ KG Y+ A+ AD Q L L+ +R + EYD +++ +L
Sbjct: 71 --YRKGEYDRAI---ADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQALR--- 122
Query: 177 SGLNANDKMSETSENHNKSDICDSSSQ-SRDVSETCSKSSHDPDLC-----NGRSDEAKG 230
L+ D + T N+ D S + R +++ +P G + ++KG
Sbjct: 123 --LDLRDAVVYT----NRGDAFRSKGEYDRAIADYDQALRFNPKYAYAYRNRGDAFQSKG 176
Query: 231 GSSVPVSKS--GLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPI 288
++ L +N + + H G + SKS + R ++ ++ D N I
Sbjct: 177 EYDRAIADYDHALRLNPE-DAAAYTHRGLAFQSKSEY-DRAIADYDQALRFDPKYANIYI 234
Query: 289 DKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKL 348
++ G D L D S+ +++ +D +D ++ +
Sbjct: 235 NRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQA-LRF 293
Query: 349 SFKWDMLKETSNEAKRNKKFCVTRISK-SKSISVDFRLS-----RGIAQVNEGKYASAIS 402
+ K+ +A RNK I+ ++ +D + + RG+A N+G+Y AI+
Sbjct: 294 NPKYAYAYRNRGDAFRNKGEYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIA 353
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+DQ L+ DP A RG A + E + AI+D+ EA++ +P + A+ RG A
Sbjct: 354 DYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYDEALRLDPKSAAAYNGRGAALNKK 413
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVEDLSACVKLDKENKSAYT 521
GE AI DL +AL +P A+ RG F+ K D + A+ +L+ V+L+ + AY
Sbjct: 414 GEYDRAIADLDQALRLKPGFANPYCHRGTA-FRHKGDLDRALAELNEAVRLNPKYADAYQ 472
Query: 522 YLGLALSSIGEYKK-----AEEAHLKA-IQLDRNFLEAWG 555
G+ + GE + AE LK ++ D FL+ G
Sbjct: 473 ERGVTFQARGESDRALADLAEAVRLKPELEADATFLKVRG 512
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%)
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G A S GEY +A + +A++LD A+ H + ++A+ Q L +D +
Sbjct: 33 GDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPK 92
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ Y RGL + G++ +AI D L +D + R + + GEY A+
Sbjct: 93 YANIYINRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAI 148
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 18 KTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI-CNRA 76
+ I + D +R++ A+A T R LA S + +AI D L + +I NR
Sbjct: 180 RAIADYDHALRLNPEDAAAYTHR-GLA-FQSKSEYDRAIADYDQALRFDPKYANIYINRG 237
Query: 77 FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
+ + + I D D+AL+LDP + AY +G AF + G + A++ +++
Sbjct: 238 YAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQ 289
>gi|376003786|ref|ZP_09781589.1| hypothetical protein ARTHRO_160012 [Arthrospira sp. PCC 8005]
gi|375327817|emb|CCE17342.1| hypothetical protein ARTHRO_160012 [Arthrospira sp. PCC 8005]
Length = 1104
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 8/294 (2%)
Query: 351 KW--DMLKETSNEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFD 405
KW D L+ +N R ++ K+ + D+ +RG+A G+Y AIS FD
Sbjct: 151 KWFDDGLQRANNGDFRG---AISSWEKAIELKPDYHEAWYNRGLALSLLGEYEQAISSFD 207
Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
Q LK P EA RG A + ELE AIS F +A++ AW RG A LGE
Sbjct: 208 QALKYKPDDHEAWYNRGVALSLLGELEQAISSFDQALKYKLDFHAAWNNRGNALKDLGEY 267
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
+AI +AL+++P+ + RG+ + A+ + ++ A+ G
Sbjct: 268 EQAISSYDQALKYKPDYHVAWNNRGLALSDLGELEKAISSYDQALTYKQDKHEAWYSRGN 327
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
ALS +GEY++A ++ +A++ ++ AW + DL EKA+ Q L F
Sbjct: 328 ALSDLGEYEQAISSYDQALKYKPDYHVAWNNRGLALSDLGELEKAISSYDQALTYKPDFH 387
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+A++ RG L LG++++AI L P E + R + +GE +A+
Sbjct: 388 EAWYSRGNALSDLGEYEQAISSYDQALKYKPDFHEAWFNRGLALYFLGELEQAI 441
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 110/236 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G+ AIS FDQ LK + A RG A E E AIS + +A++
Sbjct: 222 NRGVALSLLGELEQAISSFDQALKYKLDFHAAWNNRGNALKDLGEYEQAISSYDQALKYK 281
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A + LGE +AI +AL ++ + + + RG ++ A+
Sbjct: 282 PDYHVAWNNRGLALSDLGELEKAISSYDQALTYKQDKHEAWYSRGNALSDLGEYEQAISS 341
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A+ GLALS +GE +KA ++ +A+ +F EAW DL
Sbjct: 342 YDQALKYKPDYHVAWNNRGLALSDLGELEKAISSYDQALTYKPDFHEAWYSRGNALSDLG 401
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
E+A+ Q L F +A+ RGL L+ LG+ ++AI L P E
Sbjct: 402 EYEQAISSYDQALKYKPDFHEAWFNRGLALYFLGELEQAISSYDQALKYKPDKHEA 457
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 3/227 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
++ ++ +DF + RG A + G+Y AIS +DQ LK P Y A RG A
Sbjct: 236 AISSFDQALKYKLDFHAAWNNRGNALKDLGEYEQAISSYDQALKYKPDYHVAWNNRGLAL 295
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ ELE AIS + +A+ EAW RG A + LGE +AI +AL+++P+
Sbjct: 296 SDLGELEKAISSYDQALTYKQDKHEAWYSRGNALSDLGEYEQAISSYDQALKYKPDYHVA 355
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ + A+ + + A+ G ALS +GEY++A ++ +A++
Sbjct: 356 WNNRGLALSDLGELEKAISSYDQALTYKPDFHEAWYSRGNALSDLGEYEQAISSYDQALK 415
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+F EAW + L E+A+ Q L +A+ RG
Sbjct: 416 YKPDFHEAWFNRGLALYFLGELEQAISSYDQALKYKPDKHEAWANRG 462
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + G+ AIS +DQ L P + EA RG A + E E AIS + +A++
Sbjct: 358 NRGLALSDLGELEKAISSYDQALTYKPDFHEAWYSRGNALSDLGEYEQAISSYDQALKYK 417
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
P EAW RG A LGE +AI +AL+++P+ + RG V
Sbjct: 418 PDFHEAWFNRGLALYFLGELEQAISSYDQALKYKPDKHEAWANRGNV 464
>gi|414078463|ref|YP_006997781.1| hypothetical protein ANA_C13292 [Anabaena sp. 90]
gi|413971879|gb|AFW95968.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 1150
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 127/257 (49%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F ++GI + G AI + Q +K +P Y +A RG R + AI D+ +AI
Sbjct: 697 FYYNQGIVRYELGDKPGAIDDYTQAIKINPNYAKAYNNRGIVRNELGDKPGAIDDYNQAI 756
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP+ A+ RG R LG+ AI D + A++ PN A+ + RGIV ++ D A
Sbjct: 757 RINPNYALAYYNRGNVRYELGDKQGAIDDYTLAIKINPNYANAYYNRGIVRYELGDKPGA 816
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
++D + +K + AY G+ +G+ A + + +AI+ + N +A+ +
Sbjct: 817 IDDYNLAIKFNPNYAQAYYNRGIVRDDLGDKPGAIDDYNQAIKFNPNDAQAYYNRGIVRY 876
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+L + A++ Q + + + AY+ RG + + LG + AI D + + +P++
Sbjct: 877 ELGDKPGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAY 936
Query: 623 YLRASCYHAIGEYREAV 639
Y R S + +G+ + A+
Sbjct: 937 YGRGSVRNDLGDKQGAI 953
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 124/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + G AI ++Q ++ +P Y A RG R + + AI D+T AI+ N
Sbjct: 734 NRGIVRNELGDKPGAIDDYNQAIRINPNYALAYYNRGNVRYELGDKQGAIDDYTLAIKIN 793
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R LG+ AI D + A++F PN A + RGIV D A++D
Sbjct: 794 PNYANAYYNRGIVRYELGDKPGAIDDYNLAIKFNPNYAQAYYNRGIVRDDLGDKPGAIDD 853
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + + AY G+ +G+ A + + +AI+ + N A+ DL
Sbjct: 854 YNQAIKFNPNDAQAYYNRGIVRYELGDKPGAIDDYTQAIKFNPNDANAYYGRGSVRNDLG 913
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A++ Q + + + AY+ RG + + LG + AI D + + +P++ Y R
Sbjct: 914 DKQGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYNR 973
Query: 626 ASCYHAIGEYREAV 639
+ +G+ + A+
Sbjct: 974 GFVRNELGDKQGAI 987
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 129/249 (51%), Gaps = 2/249 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + G AI + Q +K +P A GRG+ R + + AI D+T+AI+ N
Sbjct: 870 NRGIVRYELGDKPGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFN 929
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R LG+ AI D ++A++F PN A+ + RG V + D A++D
Sbjct: 930 PNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYNRGFVRNELGDKQGAIDD 989
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + N +AY G+ + +G+ + A + + AI+ + N+ A+ + +L
Sbjct: 990 YTLAIKYN-PNYAAYYNRGIVRNELGDKQGAIDDYTLAIKYNPNY-AAYYNRGIVRNELG 1047
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A++ + I+ ++ AY+ RG + + LG + AI D + + +P+ + R
Sbjct: 1048 DKQGAIDDYTLAIKINPNYADAYYNRGFVRNELGDKQGAIDDYTLAIKYNPNYAQAYVRR 1107
Query: 626 ASCYHAIGE 634
S + +G+
Sbjct: 1108 GSVRYQLGD 1116
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G AI + +K +P Y A RG R + AI D+ AI+ N
Sbjct: 768 NRGNVRYELGDKQGAIDDYTLAIKINPNYANAYYNRGIVRYELGDKPGAIDDYNLAIKFN 827
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG R LG+ AI D ++A++F PN A + RGIV ++ D A++D
Sbjct: 828 PNYAQAYYNRGIVRDDLGDKPGAIDDYNQAIKFNPNDAQAYYNRGIVRYELGDKPGAIDD 887
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + + +AY G + +G+ + A + + +AI+ + N A+ DL
Sbjct: 888 YTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYGRGSVRNDLG 947
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A++ Q + + + AY+ RG + + LG + AI D + + +P N Y R
Sbjct: 948 DKQGAIDDYTQAIKFNPNDANAYYNRGFVRNELGDKQGAIDDYTLAIKYNP-NYAAYYNR 1006
Query: 626 ASCYHAIGEYREAV 639
+ +G+ + A+
Sbjct: 1007 GIVRNELGDKQGAI 1020
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 131/254 (51%), Gaps = 2/254 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + + G AI ++Q +K +P +A RG R + AI D+T+AI+ N
Sbjct: 836 NRGIVRDDLGDKPGAIDDYNQAIKFNPNDAQAYYNRGIVRYELGDKPGAIDDYTQAIKFN 895
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R LG+ AI D ++A++F PN A+ + RG V D A++D
Sbjct: 896 PNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDD 955
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + + +AY G + +G+ + A + + AI+ + N+ A+ + +L
Sbjct: 956 YTQAIKFNPNDANAYYNRGFVRNELGDKQGAIDDYTLAIKYNPNY-AAYYNRGIVRNELG 1014
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A++ + + ++ AY+ RG++ + LG + AI D + + I+P+ + Y R
Sbjct: 1015 DKQGAIDDYTLAIKYNPNYA-AYYNRGIVRNELGDKQGAIDDYTLAIKINPNYADAYYNR 1073
Query: 626 ASCYHAIGEYREAV 639
+ +G+ + A+
Sbjct: 1074 GFVRNELGDKQGAI 1087
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 116/223 (52%), Gaps = 2/223 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG + + G AI + Q +K +P A GRG+ R + + AI D+T+AI+ N
Sbjct: 904 GRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFN 963
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R LG+ AI D + A+++ PN A + RGIV + D A++D
Sbjct: 964 PNDANAYYNRGFVRNELGDKQGAIDDYTLAIKYNPNYA-AYYNRGIVRNELGDKQGAIDD 1022
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + N +AY G+ + +G+ + A + + AI+++ N+ +A+ + +L
Sbjct: 1023 YTLAIKYN-PNYAAYYNRGIVRNELGDKQGAIDDYTLAIKINPNYADAYYNRGFVRNELG 1081
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + A++ + + +++AY RG + + LG A +DL
Sbjct: 1082 DKQGAIDDYTLAIKYNPNYAQAYVRRGSVRYQLGDKPGAKEDL 1124
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 129/265 (48%), Gaps = 2/265 (0%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K K I + + +G+A + GKY AI+ Q +K P + A + +L+ A
Sbjct: 589 KPKFIHLAY-YGKGLALGSSGKYPEAITALQQAVKSQPDFVPAWDYLSSVYRESNQLDKA 647
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
++ +AIQ P+ + ++ + L + EA ++KA+E P +A + +GIV +
Sbjct: 648 LAAINQAIQLQPNNPNLYNQKRGVLSDLKKYKEAAAAINKAIELSPRAA-FYYNQGIVRY 706
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ D A++D + +K++ AY G+ + +G+ A + + +AI+++ N+ A+
Sbjct: 707 ELGDKPGAIDDYTQAIKINPNYAKAYNNRGIVRNELGDKPGAIDDYNQAIRINPNYALAY 766
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ +L + + A++ + I+ ++ AY+ RG++ + LG AI D + +
Sbjct: 767 YNRGNVRYELGDKQGAIDDYTLAIKINPNYANAYYNRGIVRYELGDKPGAIDDYNLAIKF 826
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
+P+ + Y R +G+ A+
Sbjct: 827 NPNYAQAYYNRGIVRDDLGDKPGAI 851
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 122/247 (49%), Gaps = 6/247 (2%)
Query: 396 KYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y AI FD + + P + A G+G A + AI+ +A++S P AW
Sbjct: 574 RYPEAIQAFDAAINQKPKFIHLAYYGKGLALGSSGKYPEAITALQQAVKSQPDFVPAWDY 633
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHE-RGIVNFKFKDFNAAVEDLSACVKLD 513
+ +A+ +++A++ +PN+ ++ ++ RG+++ K + A ++ ++L
Sbjct: 634 LSSVYRESNQLDKALAAINQAIQLQPNNPNLYNQKRGVLS-DLKKYKEAAAAINKAIELS 692
Query: 514 KENKSAYTY-LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
++A+ Y G+ +G+ A + + +AI+++ N+ +A+ + +L + A++
Sbjct: 693 P--RAAFYYNQGIVRYELGDKPGAIDDYTQAIKINPNYAKAYNNRGIVRNELGDKPGAID 750
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
Q + I+ ++ AY+ RG + + LG + AI D + + I+P+ Y R + +
Sbjct: 751 DYNQAIRINPNYALAYYNRGNVRYELGDKQGAIDDYTLAIKINPNYANAYYNRGIVRYEL 810
Query: 633 GEYREAV 639
G+ A+
Sbjct: 811 GDKPGAI 817
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 4/205 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG + + G AI + Q +K +P A RG R + + AI D+T AI+ N
Sbjct: 938 GRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYNRGFVRNELGDKQGAIDDYTLAIKYN 997
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R LG+ AI D + A+++ PN A + RGIV + D A++D
Sbjct: 998 PNYA-AYYNRGIVRNELGDKQGAIDDYTLAIKYNPNYA-AYYNRGIVRNELGDKQGAIDD 1055
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ AY G + +G+ + A + + AI+ + N+ +A+ L
Sbjct: 1056 YTLAIKINPNYADAYYNRGFVRNELGDKQGAIDDYTLAIKYNPNYAQAYVRRGSVRYQLG 1115
Query: 566 NSEKALECLQQV--LYIDKRFSKAY 588
+ A E LQ+ L+ D+ + AY
Sbjct: 1116 DKPGAKEDLQRAAQLFKDQGNTAAY 1140
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 4/181 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G AI + +K +P Y A RG R + + AI D+T AI+ N
Sbjct: 972 NRGFVRNELGDKQGAIDDYTLAIKYNPNY-AAYYNRGIVRNELGDKQGAIDDYTLAIKYN 1030
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R LG+ AI D + A++ PN AD + RG V + D A++D
Sbjct: 1031 PNYA-AYYNRGIVRNELGDKQGAIDDYTLAIKINPNYADAYYNRGFVRNELGDKQGAIDD 1089
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQD 563
+ +K + AY G +G+ A+E +A QL D+ A+ F ++
Sbjct: 1090 YTLAIKYNPNYAQAYVRRGSVRYQLGDKPGAKEDLQRAAQLFKDQGNTAAYEQTMAFLKE 1149
Query: 564 L 564
L
Sbjct: 1150 L 1150
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACV-KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
ERG ++ + + A++ A + + K AY GLAL S G+Y +A A +A++
Sbjct: 564 ERGNQLWRLRRYPEAIQAFDAAINQKPKFIHLAYYGKGLALGSSGKYPEAITALQQAVKS 623
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+F+ AW +L+ Y++ +KAL + Q + + Y+ + +L L ++K+A
Sbjct: 624 QPDFVPAWDYLSSVYRESNQLDKALAAINQAIQLQPNNPNLYNQKRGVLSDLKKYKEAAA 683
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
++ + + P RA+ Y+ G R
Sbjct: 684 AINKAIELSP--------RAAFYYNQGIVR 705
>gi|91976940|ref|YP_569599.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
palustris BisB5]
gi|91683396|gb|ABE39698.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
palustris BisB5]
Length = 629
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 6/241 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+ +GKYA AI D+ +K+DP +P A RG A+ + + A+SDF EA++ +P A
Sbjct: 117 IEQGKYAGAIVELDRAVKQDPKFPFAYAWRGVAKMRIGKFDEAMSDFNEALKLDPRNAFA 176
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+RG A AL ++ + + D++ ALE + +A RG++ D + A+ DL+ VK
Sbjct: 177 LGQRGNAFFALRDNGKGLADVNAALEIDNTAAAPYAFRGMIYSDMGDQDKALADLTRAVK 236
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLEAWGHLTQFYQDLANSE 568
L+ A+ LG S + E++K+ A+ +A++L N +L G++ + L +
Sbjct: 237 LNPNLPPAHGGLGSVYSKLQEFEKSLAAYNRALELAPNTAAYLSGRGYV---HFSLGEYD 293
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
+A+ + Q + I+ RF++ Y RG AIKD L I+P NI L RA
Sbjct: 294 RAITDISQAIAINSRFARPYINRGRAYIATNNLSAAIKDFDEALKIEPKNITALLQRAQA 353
Query: 629 Y 629
+
Sbjct: 354 F 354
>gi|188994836|ref|YP_001929088.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
gi|188594516|dbj|BAG33491.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
Length = 818
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 127/252 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A +G Y AI + Q ++ D + A RG A + E AI DF++AI+ N
Sbjct: 99 RGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKDFSKAIELND 158
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG A G EAI+D S+A+E + H RGI FK + A++D
Sbjct: 159 KYTYAYHSRGIAYCEKGSYKEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGSYEEAIKDY 218
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S ++LD + AY G+A G Y++A + + KAI+LD F A+ Y + +
Sbjct: 219 SQAIELDGKFVHAYHGRGIAYFKKGLYEEAIKDYSKAIELDGKFAHAYYDRGNAYCEKGS 278
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A++ + + +D +F+ AYH RG G +++AIKD S + +D I R
Sbjct: 279 YEEAIKDYSKAIELDGKFAHAYHNRGNAYCEKGSYEEAIKDYSQAIELDDKYILGYNGRG 338
Query: 627 SCYHAIGEYREA 638
Y+ IG++ ++
Sbjct: 339 VAYYEIGDFEKS 350
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 133/269 (49%), Gaps = 5/269 (1%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I +D + RGIA +G Y AI + Q ++ D Y A GRG A + +
Sbjct: 49 SKAIELDDKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIELDDKYAPAYHGRGNAYSKKGW 108
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI D+++AI+ + A+ RG A G EAI+D SKA+E H RG
Sbjct: 109 YKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKDFSKAIELNDKYTYAYHSRG 168
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
I + + A++D S ++LD + AY G+A G Y++A + + +AI+LD F
Sbjct: 169 IAYCEKGSYKEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIELDGKF 228
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ A+ Y E+A++ + + +D +F+ AY+ RG G +++AIKD S
Sbjct: 229 VHAYHGRGIAYFKKGLYEEAIKDYSKAIELDGKFAHAYYDRGNAYCEKGSYEEAIKDYSK 288
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +D + R + Y G Y EA+
Sbjct: 289 AIELDGKFAHAYHNRGNAYCEKGSYEEAI 317
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 128/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G Y AI + + ++ D + A GRG A + E AI D+++AI+ +
Sbjct: 30 NRGVGCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIELD 89
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG A + G +AI+D S+A+E + A ++RG + + A++D
Sbjct: 90 DKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKD 149
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++L+ + AY G+A G YK+A + + +AI+LD F+ A+ Y
Sbjct: 150 FSKAIELNDKYTYAYHSRGIAYCEKGSYKEAIKDYSQAIELDGKFVHAYHGRGIAYFKKG 209
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ E+A++ Q + +D +F AYH RG+ G +++AIKD S + +D Y R
Sbjct: 210 SYEEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGLYEEAIKDYSKAIELDGKFAHAYYDR 269
Query: 626 ASCYHAIGEYREAV 639
+ Y G Y EA+
Sbjct: 270 GNAYCEKGSYEEAI 283
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%)
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ N A+ RG +G EAI+D SKA+E + H RGI FK + A
Sbjct: 19 EPNRQEAIAYYNRGVGCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKGSYEEA 78
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
++D S ++LD + AY G A S G YKKA + + +AI+LD F A+ Y
Sbjct: 79 IKDYSQAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDRGNAYC 138
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+ + E+A++ + + ++ +++ AYH RG+ G +K+AIKD S + +D +
Sbjct: 139 EKGSYEEAIKDFSKAIELNDKYTYAYHSRGIAYCEKGSYKEAIKDYSQAIELDGKFVHAY 198
Query: 623 YLRASCYHAIGEYREAV 639
+ R Y G Y EA+
Sbjct: 199 HGRGIAYFKKGSYEEAI 215
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 125/248 (50%), Gaps = 5/248 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I +D + + RG A +G Y AI F + ++ + Y A RG A +
Sbjct: 117 SQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKDFSKAIELNDKYTYAYHSRGIAYCEKGS 176
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI D+++AI+ + A+ RG A G EAI+D S+A+E + H RG
Sbjct: 177 YKEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIELDGKFVHAYHGRG 236
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
I FK + A++D S ++LD + AY G A G Y++A + + KAI+LD F
Sbjct: 237 IAYFKKGLYEEAIKDYSKAIELDGKFAHAYYDRGNAYCEKGSYEEAIKDYSKAIELDGKF 296
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + Y + + E+A++ Q + +D ++ Y+ RG+ + +G +K+ D ++
Sbjct: 297 AHAYHNRGNAYCEKGSYEEAIKDYSQAIELDDKYILGYNGRGVAYYEIGDFEKSQADFNT 356
Query: 611 GLGIDPSN 618
L + SN
Sbjct: 357 VLYLILSN 364
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A RG E AI D+++AI+ + A+ RG A G EAI+D S+A+
Sbjct: 27 AYYNRGVGCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKGSYEEAIKDYSQAI 86
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E + A H RG K + A++D S ++LD + AY G A G Y++A
Sbjct: 87 ELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEA 146
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ KAI+L+ + A+ Y + + ++A++ Q + +D +F AYH RG+
Sbjct: 147 IKDFSKAIELNDKYTYAYHSRGIAYCEKGSYKEAIKDYSQAIELDGKFVHAYHGRGIAYF 206
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G +++AIKD S + +D + + R Y G Y EA+
Sbjct: 207 KKGSYEEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGLYEEAI 249
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%)
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
LS + +++ AY G+ +G Y++A + + KAI+LD F+ A+ Y
Sbjct: 14 LSNVPEPNRQEAIAYYNRGVGCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKG 73
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ E+A++ Q + +D +++ AYH RG G +KKAIKD S + +D Y R
Sbjct: 74 SYEEAIKDYSQAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDR 133
Query: 626 ASCYHAIGEYREAV 639
+ Y G Y EA+
Sbjct: 134 GNAYCEKGSYEEAI 147
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++S+AI LD +Y R Y + L++ I+D KA++LD AY
Sbjct: 214 AIKDYSQAIE-LDGKFVHAYH-----GRGIAYFKKGLYEEAIKDYSKAIELDGKFAHAYY 267
Query: 108 LKGCAFSALGRKEEALSVWEKGYE------HALH 135
+G A+ G EEA+ + K E HA H
Sbjct: 268 DRGNAYCEKGSYEEAIKDYSKAIELDGKFAHAYH 301
>gi|440680211|ref|YP_007155006.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428677330|gb|AFZ56096.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 560
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 130/269 (48%), Gaps = 5/269 (1%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++IS++ L+ RG A+ G AI +Q L+ +P EA R AR +
Sbjct: 190 NQAISINPNLAEAYCNRGNARCEAGDVQGAIEDCNQALRINPKLAEAYCNRSNARCESGD 249
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E AI D +A++ NP EA+ RG AR G+ AI+D ++ L PN A RG
Sbjct: 250 VEGAIEDCNQALRINPKLAEAYLNRGNARRESGDIKRAIEDYNQGLRINPNLAQAYRNRG 309
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ DF A+ED + ++++ AY G A G++K A E +A++++ N+
Sbjct: 310 FARCESGDFKGAIEDFNQAIRINPNLAQAYQNRGFARCESGDFKGAIEDFNQALRINPNY 369
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
EA+ + + + + +E Q L I+ ++AY RG+ G K AI+D +
Sbjct: 370 AEAYYNRGLAHNYSGDRQAEIEDFNQALRINPNLAEAYLNRGVTRRESGDVKGAIEDYNQ 429
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I+P+ E R G+++ A+
Sbjct: 430 ALHINPNLAEAYQNRGFARCKSGDFKGAI 458
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 121/233 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A+ G AI ++Q L+ +P +A RG AR + + AI DF +AI+
Sbjct: 272 LNRGNARRESGDIKRAIEDYNQGLRINPNLAQAYRNRGFARCESGDFKGAIEDFNQAIRI 331
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ +A++ RG AR G+ AI+D ++AL PN A+ + RG+ + D A +E
Sbjct: 332 NPNLAQAYQNRGFARCESGDFKGAIEDFNQALRINPNYAEAYYNRGLAHNYSGDRQAEIE 391
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++++ AY G+ G+ K A E + +A+ ++ N EA+ +
Sbjct: 392 DFNQALRINPNLAEAYLNRGVTRRESGDVKGAIEDYNQALHINPNLAEAYQNRGFARCKS 451
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ + A+E QVL I+ F++AY RG G K AI+D + L I+P+
Sbjct: 452 GDFKGAIEDCNQVLRINPNFAEAYLNRGNARLESGDMKGAIEDCNQALRINPN 504
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 127/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A+ G AI +Q L+ +P EA + RG AR +++ AI D+ + ++ N
Sbjct: 239 NRSNARCESGDVEGAIEDCNQALRINPKLAEAYLNRGNARRESGDIKRAIEDYNQGLRIN 298
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A++ RG AR G+ AI+D ++A+ PN A RG + DF A+ED
Sbjct: 299 PNLAQAYRNRGFARCESGDFKGAIEDFNQAIRINPNLAQAYQNRGFARCESGDFKGAIED 358
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY GLA + G+ + E +A++++ N EA+ + ++
Sbjct: 359 FNQALRINPNYAEAYYNRGLAHNYSGDRQAEIEDFNQALRINPNLAEAYLNRGVTRRESG 418
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+E Q L+I+ ++AY RG G K AI+D + L I+P+ E R
Sbjct: 419 DVKGAIEDYNQALHINPNLAEAYQNRGFARCKSGDFKGAIEDCNQVLRINPNFAEAYLNR 478
Query: 626 ASCYHAIGEYREAV 639
+ G+ + A+
Sbjct: 479 GNARLESGDMKGAI 492
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G + AI F+Q ++ +P +A RG AR + + AI DF +A++ N
Sbjct: 307 NRGFARCESGDFKGAIEDFNQAIRINPNLAQAYQNRGFARCESGDFKGAIEDFNQALRIN 366
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG A G+ I+D ++AL PN A+ RG+ + D A+ED
Sbjct: 367 PNYAEAYYNRGLAHNYSGDRQAEIEDFNQALRINPNLAEAYLNRGVTRRESGDVKGAIED 426
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ AY G A G++K A E + ++++ NF EA+ + +
Sbjct: 427 YNQALHINPNLAEAYQNRGFARCKSGDFKGAIEDCNQVLRINPNFAEAYLNRGNARLESG 486
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + A+E Q L I+ + AY RG K AI DL
Sbjct: 487 DMKGAIEDCNQALRINPNLAIAYFNRGAARLQSRDKKGAIADL 529
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 117/232 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A G +A+ + Q L +P + EA RG AR+ +++ A+ D+ +A+ N
Sbjct: 103 NQGNACAQSGDMKAAMEYYSQALSINPNFAEAYCNRGNARSKLGDMKGAMEDYNQALSIN 162
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P++ EA+ RG AR G+ ++D ++A+ PN A+ RG + D A+ED
Sbjct: 163 PNSVEAYLSRGFARLQSGDMNGGMEDYNQAISINPNLAEAYCNRGNARCEAGDVQGAIED 222
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ + AY A G+ + A E +A++++ EA+ + ++
Sbjct: 223 CNQALRINPKLAEAYCNRSNARCESGDVEGAIEDCNQALRINPKLAEAYLNRGNARRESG 282
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ ++A+E Q L I+ ++AY RG G K AI+D + + I+P+
Sbjct: 283 DIKRAIEDYNQGLRINPNLAQAYRNRGFARCESGDFKGAIEDFNQAIRINPN 334
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ + G AI ++Q L +P EA RG AR + + AI D + ++
Sbjct: 408 LNRGVTRRESGDVKGAIEDYNQALHINPNLAEAYQNRGFARCKSGDFKGAIEDCNQVLRI 467
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ EA+ RG AR G+ AI+D ++AL PN A RG + +D A+
Sbjct: 468 NPNFAEAYLNRGNARLESGDMKGAIEDCNQALRINPNLAIAYFNRGAARLQSRDKKGAIA 527
Query: 505 DLSACVKL 512
DL KL
Sbjct: 528 DLQKASKL 535
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 190/470 (40%), Gaps = 66/470 (14%)
Query: 52 WSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGC 111
+S+A+ I + A++Y CNR S+L K + D ++AL ++P ++AY+ +G
Sbjct: 121 YSQALSI-NPNFAEAY-----CNRGNARSKLGDMKGAMEDYNQALSINPNSVEAYLSRGF 174
Query: 112 AFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDR-SVTCEYDVSNSMS 170
A G + D Q + + L A +R + CE +
Sbjct: 175 ARLQSGDMNGGME--------------DYNQAISINPNLAEAYCNRGNARCE--AGDVQG 218
Query: 171 SLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSH-DPDLC-------N 222
++ L N K++E N + + C+S + E C+++ +P L N
Sbjct: 219 AIEDCNQALRINPKLAEAYCNRSNAR-CESGDVEGAI-EDCNQALRINPKLAEAYLNRGN 276
Query: 223 GRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFD 282
R + ++ GL IN L + N +R S + + +DF+
Sbjct: 277 ARRESGDIKRAIEDYNQGLRINPNLAQAYRNRG----------FARCESGDFKGAIEDFN 326
Query: 283 IC---NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSS 339
N + +A N R +G D + + +L + +E+Y ++ N S
Sbjct: 327 QAIRINPNLAQAYQNRGFARCESG--DFKGAIEDFNQALRINPNYAEAYYNRGLAHNYSG 384
Query: 340 DSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK----------SKSISVDFRLS--- 386
D + L+ N A+ VTR ++++ ++ L+
Sbjct: 385 DRQAEIEDFN---QALRINPNLAEAYLNRGVTRRESGDVKGAIEDYNQALHINPNLAEAY 441
Query: 387 --RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG A+ G + AI +Q+L+ +P + EA + RG AR +++ AI D +A++
Sbjct: 442 QNRGFARCKSGDFKGAIEDCNQVLRINPNFAEAYLNRGNARLESGDMKGAIEDCNQALRI 501
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
NP+ A+ RG AR + AI DL KA + +I+ + I++
Sbjct: 502 NPNLAIAYFNRGAARLQSRDKKGAIADLQKASKLFQQQGEIVQYQYILDL 551
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 158/407 (38%), Gaps = 72/407 (17%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+ ++++AI I + LA++Y CNR + + I DC++AL+++P L +AY
Sbjct: 185 GMEDYNQAISI-NPNLAEAY-----CNRGNARCEAGDVQGAIEDCNQALRINPKLAEAYC 238
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
+ A G E A+ D Q L + L A +R + +
Sbjct: 239 NRSNARCESGDVEGAIE--------------DCNQALRINPKLAEAYLNRG-NARRESGD 283
Query: 168 SMSSLTVSESGLNANDKMSETSENHNKSDICDSS---------SQSRDVSETCSKSSHDP 218
++ GL N +++ N + C+S +Q+ ++ +++ +
Sbjct: 284 IKRAIEDYNQGLRINPNLAQAYRNRGFAR-CESGDFKGAIEDFNQAIRINPNLAQAYQNR 342
Query: 219 DLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSEN----HNGSSDGSKSTHASRDASEIN 274
S + KG ++ L IN E N HN S D A IN
Sbjct: 343 GFARCESGDFKG--AIEDFNQALRINPNYAEAYYNRGLAHNYSGDRQAEIEDFNQALRIN 400
Query: 275 RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSIS 334
+ +A +N R+ +G DV + + +L+ + +E+Y +
Sbjct: 401 PN-----------LAEAYLNRGVTRRESG--DVKGAIEDYNQALHINPNLAEAYQNRGFA 447
Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNE 394
KS D FK + E N+ V RI+ + + + L+RG A++
Sbjct: 448 RCKSGD---------FKGAI--EDCNQ--------VLRINPNFAEAY---LNRGNARLES 485
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
G AI +Q L+ +P A RG AR R+ + AI+D +A
Sbjct: 486 GDMKGAIEDCNQALRINPNLAIAYFNRGAARLQSRDKKGAIADLQKA 532
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%)
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G A + G+ K A E + +A+ ++ NF EA+ + L + + A+E Q L
Sbjct: 101 YYNQGNACAQSGDMKAAMEYYSQALSINPNFAEAYCNRGNARSKLGDMKGAMEDYNQALS 160
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I+ +AY RG G ++D + + I+P+ E R + G+ + A+
Sbjct: 161 INPNSVEAYLSRGFARLQSGDMNGGMEDYNQAISINPNLAEAYCNRGNARCEAGDVQGAI 220
>gi|17228384|ref|NP_484932.1| hypothetical protein all0889 [Nostoc sp. PCC 7120]
gi|17130234|dbj|BAB72846.1| all0889 [Nostoc sp. PCC 7120]
Length = 605
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 136/273 (49%), Gaps = 9/273 (3%)
Query: 376 SKSISVDFRLSRGIAQVNEGK-YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
++ I + RGI E K Y AI+ F+ ++ +P Y +A R AR + AA
Sbjct: 31 NRRIDAETYCKRGITFSRELKDYQGAIAFFNLAVEINPNYAQAYYHRANARYCLADFTAA 90
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--------NSADIL 486
I+D+ +A+Q NP+ E + RG A A G+ +AI + +EF+P + A+
Sbjct: 91 IADYDQALQINPTFAEYYYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAY 150
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ RG+ N ++ A+ DL ++ +AY+ G +GEY++A H +A+QL
Sbjct: 151 YYRGLNNNDQGNYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQL 210
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
D N EA+ + + L +KA+ + L I+ AY+ RGL+ L ++++A
Sbjct: 211 DPNLAEAYQNRGNAHYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLHEYQQAFA 270
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + L +P++ + Y R Y A +Y+ A+
Sbjct: 271 DFNQVLNFNPNDAQAYYQRGLIYEAWQDYQSAL 303
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 119/253 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ ++G Y AI Q L+ P + A RG E AI+D A+Q +P
Sbjct: 153 RGLNNNDQGNYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDP 212
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA++ RG A ALG +AI D ++ LE P+ + RG+++F ++ A D
Sbjct: 213 NLAEAYQNRGNAHYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLHEYQQAFADF 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + + AY GL + +Y+ A + +++QL+ +G Y+ L +
Sbjct: 273 NQVLNFNPNDAQAYYQRGLIYEAWQDYQSALADYNQSLQLNSELAVVYGVRANIYRHLGD 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
AL ++L + F+ Y R LG ++ AI D + L I+P+ E Y RA
Sbjct: 333 YPSALADGNRLLELQPNFAAGYCDRATSRRCLGDYRGAIADYNQALQINPNIAEAYYGRA 392
Query: 627 SCYHAIGEYREAV 639
+ A+ ++ A+
Sbjct: 393 IAHEALRDFIGAI 405
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 113/214 (52%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI+ ++Q L+ +P EA GR A R+ AI+D+T++I+ +P A+
Sbjct: 365 GDYRGAIADYNQALQINPNIAEAYYGRAIAHEALRDFIGAIADYTQSIRISPDFAPAYCN 424
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG AR LG++ A+ D ++AL P ++ + RG +++ +++ +A+ D + ++L
Sbjct: 425 RGNARRQLGDTKGAVTDYNQALTINPQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQP 484
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E+ Y+ A ++ +Y+ A + ++I ++ + E W + + + L E+AL L
Sbjct: 485 ESARYYSDRAHARYALQDYQGAVADYTQSIAINPGYAEDWYNRGRSHLLLGYLEEALADL 544
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
Q L ++ AY LR +L G ++ AI D
Sbjct: 545 NQALKFHPHWASAYLLRADILRNRGDYQAAIADF 578
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 125/287 (43%), Gaps = 34/287 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG G+Y AI+ ++ ++ DP EA RG A + AI+D+ ++ NP
Sbjct: 187 RGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAHYALGAYQKAIADYNRTLEINP 246
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG L E +A D ++ L F PN A ++RG++ ++D+ +A+ D
Sbjct: 247 HQVGAYYNRGLISFYLHEYQQAFADFNQVLNFNPNDAQAYYQRGLIYEAWQDYQSALADY 306
Query: 507 SACVKLDKE-------NKSAYTYLGLALSS---------------------------IGE 532
+ ++L+ E + Y +LG S+ +G+
Sbjct: 307 NQSLQLNSELAVVYGVRANIYRHLGDYPSALADGNRLLELQPNFAAGYCDRATSRRCLGD 366
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y+ A + +A+Q++ N EA+ ++ L + A+ Q + I F+ AY RG
Sbjct: 367 YRGAIADYNQALQINPNIAEAYYGRAIAHEALRDFIGAIADYTQSIRISPDFAPAYCNRG 426
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG K A+ D + L I+P E Y R S ++ YR A+
Sbjct: 427 NARRQLGDTKGAVTDYNQALTINPQLSEAYYNRGSLHYDQQNYRSAI 473
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 122/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +Y A + F+Q+L +P +A RG ++ ++A++D+ +++Q N
Sbjct: 254 NRGLISFYLHEYQQAFADFNQVLNFNPNDAQAYYQRGLIYEAWQDYQSALADYNQSLQLN 313
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ R LG+ A+ D ++ LE +PN A +R D+ A+ D
Sbjct: 314 SELAVVYGVRANIYRHLGDYPSALADGNRLLELQPNFAAGYCDRATSRRCLGDYRGAIAD 373
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY +A ++ ++ A + ++I++ +F A+ + + L
Sbjct: 374 YNQALQINPNIAEAYYGRAIAHEALRDFIGAIADYTQSIRISPDFAPAYCNRGNARRQLG 433
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+++ A+ Q L I+ + S+AY+ RG L + ++ AI D + L + P + R
Sbjct: 434 DTKGAVTDYNQALTINPQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDR 493
Query: 626 ASCYHAIGEYREAV 639
A +A+ +Y+ AV
Sbjct: 494 AHARYALQDYQGAV 507
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 3/184 (1%)
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDP 412
+ ++EA R+ + ++S IS DF +RG A+ G A++ ++Q L +P
Sbjct: 391 RAIAHEALRDFIGAIADYTQSIRISPDFAPAYCNRGNARRQLGDTKGAVTDYNQALTINP 450
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
EA RG+ Q+ +AI+D+T+A++ P + + R AR AL + A+ D
Sbjct: 451 QLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQDYQGAVADY 510
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++++ P A+ + RG + A+ DL+ +K SAY L + G+
Sbjct: 511 TQSIAINPGYAEDWYNRGRSHLLLGYLEEALADLNQALKFHPHWASAYLLRADILRNRGD 570
Query: 533 YKKA 536
Y+ A
Sbjct: 571 YQAA 574
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 19/149 (12%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++++++ +LS RG ++ Y SAI+ + Q L+ P R AR ++
Sbjct: 443 NQALTINPQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQD 502
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN-------SA 483
+ A++D+T++I NP E W RG++ LG EA+ DL++AL+F P+ A
Sbjct: 503 YQGAVADYTQSIAINPGYAEDWYNRGRSHLLLGYLEEALADLNQALKFHPHWASAYLLRA 562
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKL 512
DIL RG D+ AA+ D L
Sbjct: 563 DILRNRG-------DYQAAIADFQKSADL 584
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
R Y +L ++ I D ++A+QLDP L +AY +G A ALG ++A++ + + E
Sbjct: 187 RGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAHYALGAYQKAIADYNRTLEINP 246
Query: 135 HQ 136
HQ
Sbjct: 247 HQ 248
>gi|300869588|ref|ZP_07114169.1| putative Serine/threonine protein kinase with TPR repeats
[Oscillatoria sp. PCC 6506]
gi|300332456|emb|CBN59369.1| putative Serine/threonine protein kinase with TPR repeats
[Oscillatoria sp. PCC 6506]
Length = 774
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 126/245 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI + Q ++ DP +A RG A + +A+ DFT+ I+ NP+ EA+ +
Sbjct: 434 GAYQQAIQDYTQAIQVDPNNVKAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQ 493
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R LG+ AI+D ++A+ PN A RG+ D A+ D + ++L+
Sbjct: 494 RALGYYELGDYKTAIEDYTQAIRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNP 553
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ S Y G A ++ +YK A E + +AI LD N +A+ + Y +LA +KA+E
Sbjct: 554 KQASVYYSRGRARFNLADYKGAMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDC 613
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q + +D + ++AY+ R + LG ++KA +D S +GI +N + R AIG+
Sbjct: 614 TQAIALDPKNAEAYNNRCIARLNLGDYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGD 673
Query: 635 YREAV 639
+ A+
Sbjct: 674 KQGAI 678
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 123/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + SA+ F Q+++ +P EA R + + AI D+T+AI+ N
Sbjct: 459 NRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYYELGDYKTAIEDYTQAIRLN 518
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +++ RG AR+A G+ A+ D ++A+E P A + + RG F D+ A+ED
Sbjct: 519 PNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASVYYSRGRARFNLADYKGAMED 578
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + LD AYT A ++ Y KA E +AI LD EA+ + +L
Sbjct: 579 YSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDCTQAIALDPKNAEAYNNRCIARLNLG 638
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ +KA E + I KA+ RGL +G + AI+D S + ++PS+ R
Sbjct: 639 DYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGDKQGAIEDFSQAIRLNPSDAVAYSNR 698
Query: 626 ASCYHAIGEYREAV 639
Y I Y A+
Sbjct: 699 GIVYSEIKNYGSAI 712
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 132/279 (47%), Gaps = 13/279 (4%)
Query: 361 EAKRNKKFCVTRISKSKSISVDF----RLS---------RGIAQVNEGKYASAISIFDQI 407
+A N+ T I +S DF RL+ R + G Y +AI + Q
Sbjct: 455 KAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYYELGDYKTAIEDYTQA 514
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ +P ++ RG AR+ + + A+SDFT+AI+ NP + RG+AR L +
Sbjct: 515 IRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASVYYSRGRARFNLADYKG 574
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A++D S+A+ +PN AD R ++ A+ED + + LD +N AY +A
Sbjct: 575 AMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDCTQAIALDPKNAEAYNNRCIAR 634
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
++G+Y+KA E I + N +A+ + + + + A+E Q + ++ + A
Sbjct: 635 LNLGDYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGDKQGAIEDFSQAIRLNPSDAVA 694
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
Y RG++ + + AI+D + + + P+N Y R
Sbjct: 695 YSNRGIVYSEIKNYGSAIEDFAQSIRLSPNNATAYYSRG 733
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 120/242 (49%), Gaps = 2/242 (0%)
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
A+ I F Q ++ P + R +A Q + AI+D+T+AI N EA+ +R
Sbjct: 371 AAIIIYFWQ--RQAPARAKEFYERAVQKAKQGDKAGAIADYTQAIGLNSRDAEAYYKRAN 428
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
LG +AIQD ++A++ +PN+ + RG+ +D +AV+D + ++L+ +
Sbjct: 429 THYDLGAYQQAIQDYTQAIQVDPNNVKAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDA 488
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
AY L +G+YK A E + +AI+L+ N +++ + + + A+ Q
Sbjct: 489 EAYYQRALGYYELGDYKTAIEDYTQAIRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQA 548
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
+ ++ + + Y+ RG L +K A++D S + +DP+ + R S Y + Y +
Sbjct: 549 IELNPKQASVYYSRGRARFNLADYKGAMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDK 608
Query: 638 AV 639
A+
Sbjct: 609 AI 610
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G A+S F Q ++ +P RG AR + + A+ D+++AI +
Sbjct: 527 NRGLARSAAGDKQGAMSDFTQAIELNPKQASVYYSRGRARFNLADYKGAMEDYSQAIVLD 586
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ R A L +AI+D ++A+ +P +A+ + R I D+ A ED
Sbjct: 587 PNQADAYTNRCSAYLNLATYDKAIEDCTQAIALDPKNAEAYNNRCIARLNLGDYQKASED 646
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + + N A++ GLA S+IG+ + A E +AI+L+ + A+ + Y ++
Sbjct: 647 CSLTIGITGNNPKAFSNRGLARSAIGDKQGAIEDFSQAIRLNPSDAVAYSNRGIVYSEIK 706
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLL 594
N A+E Q + + + AY+ RG++
Sbjct: 707 NYGSAIEDFAQSIRLSPNNATAYYSRGII 735
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 37/201 (18%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A+ N Y A+ + Q + DP +A R +A + AI D T+AI +
Sbjct: 561 SRGRARFNLADYKGAMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDCTQAIALD 620
Query: 446 PSAGEAWKRR----------------------------------GQARAALGESVEAIQD 471
P EA+ R G AR+A+G+ AI+D
Sbjct: 621 PKNAEAYNNRCIARLNLGDYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGDKQGAIED 680
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
S+A+ P+ A RGIV + K++ +A+ED + ++L N +AY G+ +
Sbjct: 681 FSQAIRLNPSDAVAYSNRGIVYSEIKNYGSAIEDFAQSIRLSPNNATAYYSRGIIRRELK 740
Query: 532 EYKKAEEAHLKAIQLDRNFLE 552
+ A E KA L FLE
Sbjct: 741 DRLGANEDFQKAATL---FLE 758
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA++N G Y A + P+A RG AR+ + + AI DF++AI+ N
Sbjct: 629 NRCIARLNLGDYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGDKQGAIEDFSQAIRLN 688
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A+ RG + + AI+D ++++ PN+A + RGI+ + KD A ED
Sbjct: 689 PSDAVAYSNRGIVYSEIKNYGSAIEDFAQSIRLSPNNATAYYSRGIIRRELKDRLGANED 748
Query: 506 LSACVKLDKENKSAYTY 522
L E A Y
Sbjct: 749 FQKAATLFLEQGRADAY 765
>gi|330507774|ref|YP_004384202.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328928582|gb|AEB68384.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 432
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 136/268 (50%), Gaps = 5/268 (1%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++IS+D + + +G A + GKY AI DQ + DP A +GT +
Sbjct: 156 QAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDPQNAYAWYNKGTVLGILGKY 215
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI F +AI +P EAW +G A LG+ EAI+ +A+ +P A+ +GI
Sbjct: 216 DEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKACDQAISIDPQLAETWTIKGI 275
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ ++ A++ + ++ + A+ G+AL+++G+Y +A +A +AI ++
Sbjct: 276 ALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGKYDEAIKACDQAISINPQDA 335
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
AW DL ++A++ Q I+ +F++A++ +G+ L LG++ +AIK
Sbjct: 336 FAWTIKGIALYDLGKYDEAIQAYDQANRINPQFAEAWYNKGVALTALGKYDEAIKACDQA 395
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ I+P E Y + A+G+Y EA+
Sbjct: 396 ISINPQFAEAWYNKGVVLKALGKYDEAI 423
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 128/253 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A + GKY AI+ +DQ + DP Y A +GTA + + AI +AI +P
Sbjct: 137 KGNALYDLGKYDEAINAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDP 196
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +G LG+ EAI+ +A+ +P A+ + +G + ++ A++
Sbjct: 197 QNAYAWYNKGTVLGILGKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKAC 256
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +D + +T G+AL +G+Y +A +A+ +AI ++ EAW + L
Sbjct: 257 DQAISIDPQLAETWTIKGIALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGK 316
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++A++ Q + I+ + + A+ ++G+ L+ LG++ +AI+ I+P E Y +
Sbjct: 317 YDEAIKACDQAISINPQDAFAWTIKGIALYDLGKYDEAIQAYDQANRINPQFAEAWYNKG 376
Query: 627 SCYHAIGEYREAV 639
A+G+Y EA+
Sbjct: 377 VALTALGKYDEAI 389
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 117/217 (53%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI FDQ + DP + EA +GTA + + AI +AI +P E W
Sbjct: 213 GKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKACDQAISIDPQLAETWTI 272
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG+ EAIQ +A+ P A+ + +G+ ++ A++ + ++
Sbjct: 273 KGIALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGKYDEAIKACDQAISINP 332
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ A+T G+AL +G+Y +A +A+ +A +++ F EAW + L ++A++
Sbjct: 333 QDAFAWTIKGIALYDLGKYDEAIQAYDQANRINPQFAEAWYNKGVALTALGKYDEAIKAC 392
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
Q + I+ +F++A++ +G++L LG++ +AIK SG
Sbjct: 393 DQAISINPQFAEAWYNKGVVLKALGKYDEAIKAFESG 429
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y AI +DQ + DP Y A +G A + + AI+ +AI NP AW
Sbjct: 77 GRYDEAIQAYDQAISIDPQYAYAWSNKGEALRALGKYDEAINACDQAISINPQDAFAWTI 136
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG+ EAI +A+ +P A +G ++ A++ + +D
Sbjct: 137 KGNALYDLGKYDEAINAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDP 196
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N A+ G L +G+Y +A + +AI +D F EAW + L ++A++
Sbjct: 197 QNAYAWYNKGTVLGILGKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKAC 256
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q + ID + ++ + ++G+ L+ LG++ +AI+ + I+P E Y + A+G+
Sbjct: 257 DQAISIDPQLAETWTIKGIALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGK 316
Query: 635 YREAV 639
Y EA+
Sbjct: 317 YDEAI 321
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 2/256 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQ 443
L +G A V Y AI +DQ + DP A +G A RA R EA I + +AI
Sbjct: 33 LEKGNAFVMLSMYDEAIQAYDQAISIDPQDAYAWSNKGEALRALGRYDEA-IQAYDQAIS 91
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+P AW +G+A ALG+ EAI +A+ P A +G + ++ A+
Sbjct: 92 IDPQYAYAWSNKGEALRALGKYDEAINACDQAISINPQDAFAWTIKGNALYDLGKYDEAI 151
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ +D + A++ G AL +G+Y +A +A +AI +D AW +
Sbjct: 152 NAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDPQNAYAWYNKGTVLGI 211
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L ++A++ Q + ID +F++A++ +G L LG++ +AIK + IDP E
Sbjct: 212 LGKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKACDQAISIDPQLAETWT 271
Query: 624 LRASCYHAIGEYREAV 639
++ + +G+Y EA+
Sbjct: 272 IKGIALYDLGKYDEAI 287
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W +G A L EAIQ +A+ +P A +G ++ A++ +
Sbjct: 32 WLEKGNAFVMLSMYDEAIQAYDQAISIDPQDAYAWSNKGEALRALGRYDEAIQAYDQAIS 91
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+D + A++ G AL ++G+Y +A A +AI ++ AW DL ++A+
Sbjct: 92 IDPQYAYAWSNKGEALRALGKYDEAINACDQAISINPQDAFAWTIKGNALYDLGKYDEAI 151
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
Q + ID +++ A+ +G L LG++ +AIK + IDP N Y + +
Sbjct: 152 NAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDPQNAYAWYNKGTVLGI 211
Query: 632 IGEYREAV 639
+G+Y EA+
Sbjct: 212 LGKYDEAI 219
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSL------LAQS 66
L K + I D+ + ++ A A T I+ L L + +AI+ D A++
Sbjct: 314 LGKYDEAIKACDQAISINPQDAFAWT--IKGIALYDLGKYDEAIQAYDQANRINPQFAEA 371
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
+ N+ + L + I+ CD+A+ ++P +A+ KG ALG+ +EA+ +
Sbjct: 372 W-----YNKGVALTALGKYDEAIKACDQAISINPQFAEAWYNKGVVLKALGKYDEAIKAF 426
Query: 127 EKGYEH 132
E GY+H
Sbjct: 427 ESGYQH 432
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
RL K + I D+ + +D +A T I+ L L + +AI+ D ++ + +I +
Sbjct: 245 RLGKYDEAIKACDQAISIDPQLAETWT--IKGIALYDLGKYDEAIQAYDQAISINPQIAE 302
Query: 72 IC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
N+ + L + I+ CD+A+ ++P A+ +KG A LG+ +EA+ +++
Sbjct: 303 AWYNKGVALTALGKYDEAIKACDQAISINPQDAFAWTIKGIALYDLGKYDEAIQAYDQ 360
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
L K + I D+ + +D A A + + L L + +AI+ D ++ + +
Sbjct: 178 LGKYDEAIKACDQAISIDPQNAYAWYNKGTV--LGILGKYDEAIKPFDQAISIDPQFAEA 235
Query: 73 C-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
N+ +L + I+ CD+A+ +DP L + + +KG A LG+ +EA+ +++
Sbjct: 236 WYNKGTALGRLGKYDEAIKACDQAISIDPQLAETWTIKGIALYDLGKYDEAIQAYDQ 292
>gi|333996917|ref|YP_004529529.1| hypothetical protein TREPR_3648 [Treponema primitia ZAS-2]
gi|333741255|gb|AEF86745.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
Length = 450
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 8/276 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKE 410
L +N K + + + +I D+ L+RG A +GK AI+ + ++
Sbjct: 120 FLHGLANSGKGEYHHAIRDYTATINIDPDYTQAYLNRGQAYCYKGKLDLAITDYTLAIRS 179
Query: 411 DPMYPEALIGRGTA---RAFQRELE--AAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
DP+ +A I RG A +AF ++ + AI DFT AI +P+ +A+ RG A G+
Sbjct: 180 DPINTDAYIHRGLAYEVKAFIKKSKHGQAIEDFTIAINIDPNNVDAYTHRGNAYNYDGDY 239
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
AI D +A+ N A RG ++K D + A++D + + +D + AYTY G
Sbjct: 240 DRAITDFDQAIRINSNYAIAYINRGNSHYKKGDDDLAIKDFTMAISIDPNDADAYTYRGD 299
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
A S EY+KA E + +AI ++ + + A+ + Y + +A+E QV+ I+ +
Sbjct: 300 AYSRKREYRKAIEDYTQAININPDDINAYKTRGRIYYKKGDYNRAIEDYTQVIGINPDDA 359
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
AY+ RG++ + G + +AI+D + + I P E
Sbjct: 360 VAYNSRGIIYYKNGDYDQAIEDYTQAINIAPDYAEA 395
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 8/225 (3%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD RG A +G Y AI+ FDQ ++ + Y A I RG + + + + AI DFT
Sbjct: 222 NVDAYTHRGNAYNYDGDYDRAITDFDQAIRINSNYAIAYINRGNSHYKKGDDDLAIKDFT 281
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AI +P+ +A+ RG A + E +AI+D ++A+ P+ + RG + +K D+
Sbjct: 282 MAISIDPNDADAYTYRGDAYSRKREYRKAIEDYTQAININPDDINAYKTRGRIYYKKGDY 341
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
N A+ED + + ++ ++ AY G+ G+Y +A E + +AI + ++ EA +L
Sbjct: 342 NRAIEDYTQVIGINPDDAVAYNSRGIIYYKNGDYDQAIEDYTQAINIAPDYAEANLNLAM 401
Query: 560 F-------YQDLANSEKALECLQQVLYIDKRFSKA-YHLRGLLLH 596
Y + E+AL+ Q + +D + A Y+ LL+H
Sbjct: 402 AHNSRGIKYTKCHDYEQALDDFNQAISVDPNYYDARYNFENLLIH 446
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 121/293 (41%), Gaps = 39/293 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA---- 441
+RG++ +G+Y SAI+ + Q +K DP +L RG + A +DFT+A
Sbjct: 19 NRGVSFEKKGEYDSAIADYTQAIKLDPCDAFSLFFRGRTYIKMGNSDQARADFTQANNID 78
Query: 442 ------------------------------IQSNPSAGEAWKRRGQARAALGESVEAIQD 471
I NP+ A+ G A + GE AI+D
Sbjct: 79 PNLAVLLKNQSSAYYHKGNYDIARWLCTFAIMLNPNDAAAYFLHGLANSGKGEYHHAIRD 138
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ + +P+ RG + A+ D + ++ D N AY + GLA
Sbjct: 139 YTATINIDPDYTQAYLNRGQAYCYKGKLDLAITDYTLAIRSDPINTDAYIHRGLAYEVKA 198
Query: 532 EYKKAE-----EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
KK++ E AI +D N ++A+ H Y + ++A+ Q + I+ ++
Sbjct: 199 FIKKSKHGQAIEDFTIAINIDPNNVDAYTHRGNAYNYDGDYDRAITDFDQAIRINSNYAI 258
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY RG + G AIKD + + IDP++ + R Y EYR+A+
Sbjct: 259 AYINRGNSHYKKGDDDLAIKDFTMAISIDPNDADAYTYRGDAYSRKREYRKAI 311
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 114/235 (48%), Gaps = 9/235 (3%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P EA RG + + E ++AI+D+T+AI+ +P + RG+ +G S +A D
Sbjct: 11 PDTAEAFKNRGVSFEKKGEYDSAIADYTQAIKLDPCDAFSLFFRGRTYIKMGNSDQARAD 70
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
++A +PN A +L + + +++ A + + L+ + +AY GLA S G
Sbjct: 71 FTQANNIDPNLAVLLKNQSSAYYHKGNYDIARWLCTFAIMLNPNDAAAYFLHGLANSGKG 130
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFY-----QDLANSEKALECLQQVLYIDKRFSK 586
EY A + I +D ++ +A+ + Q Y DLA ++ L + D +
Sbjct: 131 EYHHAIRDYTATINIDPDYTQAYLNRGQAYCYKGKLDLAITDYTLAIRSDPINTDAYIHR 190
Query: 587 --AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY ++ + +H +AI+D + + IDP+N++ R + Y+ G+Y A+
Sbjct: 191 GLAYEVKAFIKK--SKHGQAIEDFTIAINIDPNNVDAYTHRGNAYNYDGDYDRAI 243
>gi|21674885|ref|NP_662950.1| hypothetical protein CT2075 [Chlorobium tepidum TLS]
gi|21648109|gb|AAM73292.1| TPR domain protein [Chlorobium tepidum TLS]
Length = 297
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 128/255 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GI + EG Y AI F + ++ P +A RG AR +L AI+D++ +I
Sbjct: 14 IDQGIRRGLEGNYQDAIDHFSRAIRLTPRNADAFYNRGLARVSIGDLTGAIADYSMSISL 73
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P + A+ RG A AALG EA+ D+S+A+ P+ A + + RG + K + A+
Sbjct: 74 DPRSSGAYNNRGFALAALGRYAEALADMSRAIALRPDMAQLYNNRGTIRMSIKAYALAIA 133
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + LD AY GLA + G+ + A + +A+++D + AW +L + L
Sbjct: 134 DFTRAIALDPLLAGAYNNRGLARNLSGQLQGAVADYREAVRIDPRYKVAWYNLGNAHISL 193
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++++A+E +VL +D A + R LG +K A++DL+ + P + Y
Sbjct: 194 GDAKEAVEDYSKVLVLDPGMLVARNNRAFARLSLGDYKGALEDLNLVISKSPQDAAGWYN 253
Query: 625 RASCYHAIGEYREAV 639
R G+ + A+
Sbjct: 254 RGVVRKLAGDRQGAI 268
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 21/173 (12%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A+ L ++GI ++ A++ S ++L N A+ GLA SIG+ A +
Sbjct: 8 GPAEELIDQGIRRGLEGNYQDAIDHFSRAIRLTPRNADAFYNRGLARVSIGDLTGAIADY 67
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+I LD A+ + L +AL + + + + ++ Y+ RG + +
Sbjct: 68 SMSISLDPRSSGAYNNRGFALAALGRYAEALADMSRAIALRPDMAQLYNNRGTIRMSIKA 127
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYH--------------AIGEYREAV 639
+ AI D + + +DP L A Y+ A+ +YREAV
Sbjct: 128 YALAIADFTRAIALDP-------LLAGAYNNRGLARNLSGQLQGAVADYREAV 173
>gi|354566722|ref|ZP_08985893.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353544381|gb|EHC13835.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 1272
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 159/356 (44%), Gaps = 17/356 (4%)
Query: 298 GRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKE 357
G QT TH + + LS +S N ++ +E++ + K D + + + K LK
Sbjct: 283 GIQTTDTHAIIEALSDES---NGNSVQAEAWFYEGLQQAKIGDLAGALTYYN-KSVELKP 338
Query: 358 TSNEAKRNKKFCVTRIS----------KSKSISVDF---RLSRGIAQVNEGKYASAISIF 404
+ E N+ + + ++ I DF +RG A G + AI+ F
Sbjct: 339 DAYEYWFNRGLTLFYLGNFPEAIASYDRAIGIKPDFYKGWYNRGAALSELGNFTEAIASF 398
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
D+ LK Y EA GRG + +L AI+ F ++Q P E W RG A A G+
Sbjct: 399 DEALKLKHDYHEAWSGRGLVQLKLGQLSEAIASFDASLQLQPHDPEIWYFRGTALAEAGQ 458
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
+ +AI ++ALE+ P ++RG+ F D+ A+ + ++++ E A+ L
Sbjct: 459 NHDAIACYAQALEYHPEFDLAWYKRGVALFNIGDWEEAIANYHQAIQINPECYQAWYGLA 518
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
+G ++A A+ ++ Q+ NF EAW L N E+A+ + + I+ F
Sbjct: 519 GVQEKLGNIQEAIAAYDRSTQIQPNFHEAWIDRGVILASLGNWEEAIASWDKAIAINPNF 578
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ RG+ L LG+ ++AI + I+ Y R +G+Y EA+I
Sbjct: 579 YLTWFNRGVALDNLGRREEAIASYDKAIEIESDFYLAWYNRGVAQFYLGQYEEAII 634
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 114/242 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ Q+ G+ + AI+ FD L+ P PE RGTA A + AI+ + +A++ +P
Sbjct: 415 RGLVQLKLGQLSEAIASFDASLQLQPHDPEIWYFRGTALAEAGQNHDAIACYAQALEYHP 474
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +RG A +G+ EAI + +A++ P + V K + A+
Sbjct: 475 EFDLAWYKRGVALFNIGDWEEAIANYHQAIQINPECYQAWYGLAGVQEKLGNIQEAIAAY 534
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ A+ G+ L+S+G +++A + KAI ++ NF W + +L
Sbjct: 535 DRSTQIQPNFHEAWIDRGVILASLGNWEEAIASWDKAIAINPNFYLTWFNRGVALDNLGR 594
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A+ + + I+ F A++ RG+ LGQ+++AI L I P E R
Sbjct: 595 REEAIASYDKAIEIESDFYLAWYNRGVAQFYLGQYEEAIISYDGSLKIKPDYWEAWLGRG 654
Query: 627 SC 628
S
Sbjct: 655 SA 656
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Query: 365 NKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +S I +F + RG+ + G + AI+ +D+ + +P + R
Sbjct: 526 NIQEAIAAYDRSTQIQPNFHEAWIDRGVILASLGNWEEAIASWDKAIAINPNFYLTWFNR 585
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A E AI+ + +AI+ AW RG A+ LG+ EAI +L+ +P+
Sbjct: 586 GVALDNLGRREEAIASYDKAIEIESDFYLAWYNRGVAQFYLGQYEEAIISYDGSLKIKPD 645
Query: 482 SADILHERG 490
+ RG
Sbjct: 646 YWEAWLGRG 654
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + K+ +I+ +F L+ RG+A N G+ AI+ +D+ ++ + + A R
Sbjct: 560 NWEEAIASWDKAIAINPNFYLTWFNRGVALDNLGRREEAIASYDKAIEIESDFYLAWYNR 619
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
G A+ + + E AI + +++ P EAW RG A
Sbjct: 620 GVAQFYLGQYEEAIISYDGSLKIKPDYWEAWLGRGSA 656
>gi|434405402|ref|YP_007148287.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428259657|gb|AFZ25607.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 662
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 121/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G++ AI+ FD+ L+ P + EA RG E AI+ + +AI+
Sbjct: 269 NRGVALGNLGRHEEAIASFDKALEIKPDFHEAWNNRGAVLGNLGRNEEAITSYDKAIEIK 328
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW G A LG+ +AI KALE +P+ + RG+ K + A+
Sbjct: 329 PDFHEAWYNLGNALVQLGQDEKAIASYDKALEIKPDFHQAWNNRGVTLGKLGQYEEAIAS 388
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ GLAL +G Y+ A + + I++ ++ EAW +L
Sbjct: 389 YDKALEIKPDYYEAWYNRGLALGELGRYQDAIASFKEVIRIKPDYCEAWFKRGVMLGNLE 448
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+E A+ +V+ I + +A++ RGL L LG ++ AI L I P + E Y R
Sbjct: 449 RNENAIASFDEVIKIKPDYHEAWYNRGLALDNLGMYRDAIASYEQVLKIKPDDHEAWYNR 508
Query: 626 ASCYHAIGEYREAV 639
IG Y + +
Sbjct: 509 GLALGNIGRYEDEI 522
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 4/267 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I DF + RG+ G+Y AI+ +D+ L+ P Y EA RG A
Sbjct: 351 AIASYDKALEIKPDFHQAWNNRGVTLGKLGQYEEAIASYDKALEIKPDYYEAWYNRGLAL 410
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ AI+ F E I+ P EAW +RG L + AI + ++ +P+ +
Sbjct: 411 GELGRYQDAIASFKEVIRIKPDYCEAWFKRGVMLGNLERNENAIASFDEVIKIKPDYHEA 470
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ + A+ +K+ ++ A+ GLAL +IG Y+ ++ + ++
Sbjct: 471 WYNRGLALDNLGMYRDAIASYEQVLKIKPDDHEAWYNRGLALGNIGRYEDEIASYHELLK 530
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ N EAW + +L +E+A+ +V+ + + ++ RGL L LG+++ AI
Sbjct: 531 IKPNDYEAWYNWGIALVNLGKNEEAIAYFDKVVNLKPDDYQTWYNRGLALGKLGRYENAI 590
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAI 632
+ I P + Y +A CY A+
Sbjct: 591 ASYDKAVEIKPELQQAWYNKA-CYCAL 616
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 117/246 (47%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
E +Y AI+ D+ ++ P +A RG A E AI+ F +A++ P EAW
Sbjct: 243 EERYEEAIASCDKAIELKPDMHKAWSNRGVALGNLGRHEEAIASFDKALEIKPDFHEAWN 302
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG LG + EAI KA+E +P+ + + G + A+ +++
Sbjct: 303 NRGAVLGNLGRNEEAITSYDKAIEIKPDFHEAWYNLGNALVQLGQDEKAIASYDKALEIK 362
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ A+ G+ L +G+Y++A ++ KA+++ ++ EAW + +L + A+
Sbjct: 363 PDFHQAWNNRGVTLGKLGQYEEAIASYDKALEIKPDYYEAWYNRGLALGELGRYQDAIAS 422
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
++V+ I + +A+ RG++L L +++ AI + I P E Y R +G
Sbjct: 423 FKEVIRIKPDYCEAWFKRGVMLGNLERNENAIASFDEVIKIKPDYHEAWYNRGLALDNLG 482
Query: 634 EYREAV 639
YR+A+
Sbjct: 483 MYRDAI 488
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+ + A F+ E AI+ +AI+ P +AW RG A LG EAI KALE
Sbjct: 234 VKQADALFFEERYEEAIASCDKAIELKPDMHKAWSNRGVALGNLGRHEEAIASFDKALEI 293
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+P+ + + RG V A+ +++ + A+ LG AL +G+ +KA
Sbjct: 294 KPDFHEAWNNRGAVLGNLGRNEEAITSYDKAIEIKPDFHEAWYNLGNALVQLGQDEKAIA 353
Query: 539 AHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
++ KA+++ +F +AW G L Q+ + +A+ +KALE I + +A++ R
Sbjct: 354 SYDKALEIKPDFHQAWNNRGVTLGKLGQYEEAIASYDKALE-------IKPDYYEAWYNR 406
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
GL L LG+++ AI + I P E + R
Sbjct: 407 GLALGELGRYQDAIASFKEVIRIKPDYCEAWFKRG 441
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
NR L H+ I DKAL++ P +A+ +G LGR EEA++ Y+ A
Sbjct: 269 NRGVALGNLGRHEEAIASFDKALEIKPDFHEAWNNRGAVLGNLGRNEEAIT----SYDKA 324
Query: 134 LHQSADLKQ-FLELEELLTAAKQDRSVTCEYD 164
+ D + + L L QD YD
Sbjct: 325 IEIKPDFHEAWYNLGNALVQLGQDEKAIASYD 356
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 83 ELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE--HALHQS--- 137
E ++ I CDKA++L P + +A+ +G A LGR EEA++ ++K E H++
Sbjct: 244 ERYEEAIASCDKAIELKPDMHKAWSNRGVALGNLGRHEEAIASFDKALEIKPDFHEAWNN 303
Query: 138 --ADLKQFLELEELLTAAKQDRSVTCE-------YDVSNSMSSLTVSESGLNANDKMSET 188
A L EE +T+ D+++ + Y++ N++ L E + + DK E
Sbjct: 304 RGAVLGNLGRNEEAITS--YDKAIEIKPDFHEAWYNLGNALVQLGQDEKAIASYDKALEI 361
Query: 189 SENHNKS 195
+ +++
Sbjct: 362 KPDFHQA 368
>gi|254410950|ref|ZP_05024728.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196182305|gb|EDX77291.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 799
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 134/267 (50%), Gaps = 3/267 (1%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
++ I S S + +RG Q + G + AI+ +D+ L+ P A RG A A
Sbjct: 148 ISSIENSDSEQAEVWFNRGNQQFDAGDFLGAIANYDKALQFKPDNHYAWFMRGVALADLG 207
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E AI+++ +A+Q P +AW RG A A LGE EAI + KAL+ +P+ + R
Sbjct: 208 KYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDFHQAWYNR 267
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ ++ A+ + +++ + A+ G+AL ++G+Y++A + KA+Q+ +
Sbjct: 268 GVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVALGNLGKYEEAIANYDKALQIQPD 327
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
F +AW DL E+A+ + L F A++ RG+ L LG++++AI
Sbjct: 328 FHQAWFMRGVALADLGEYEEAIANYDKALQFKPDFHYAWNNRGVALADLGKYEEAIASFD 387
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYR 636
L I P ++ +L A+GE R
Sbjct: 388 KALQIKP-DLHQAWLNRGI--AVGESR 411
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 107/209 (51%), Gaps = 1/209 (0%)
Query: 432 EAAISDFTEAIQ-SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E ++SD +I+ S+ E W RG + G+ + AI + KAL+F+P++ RG
Sbjct: 141 ETSLSDSISSIENSDSEQAEVWFNRGNQQFDAGDFLGAIANYDKALQFKPDNHYAWFMRG 200
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + A+ + +++ + A+ G+AL+ +GEY++A + KA+Q+ +F
Sbjct: 201 VALADLGKYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDF 260
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+AW + DL E+A+ + L I +A++ RG+ L LG++++AI +
Sbjct: 261 HQAWYNRGVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVALGNLGKYEEAIANYDK 320
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P + ++R +GEY EA+
Sbjct: 321 ALQIQPDFHQAWFMRGVALADLGEYEEAI 349
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++R A +L +S+ +I++ A++ RG F DF A+ + ++
Sbjct: 135 RKRVSAETSLSDSISSIENSDS------EQAEVWFNRGNQQFDAGDFLGAIANYDKALQF 188
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+N A+ G+AL+ +G+Y++A + KA+Q+ +F +AW + DL E+A+
Sbjct: 189 KPDNHYAWFMRGVALADLGKYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIA 248
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+ L I F +A++ RG+ L LG++++AI + L I P E Y R +
Sbjct: 249 NYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVALGNL 308
Query: 633 GEYREAV 639
G+Y EA+
Sbjct: 309 GKYEEAI 315
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I DF +RG+A + G+Y AI+ +D+ L+ P EA RG A
Sbjct: 246 AIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVAL 305
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ E AI+++ +A+Q P +AW RG A A LGE EAI + KAL+F+P+
Sbjct: 306 GNLGKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGEYEEAIANYDKALQFKPDFHYA 365
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+ RG+ + A+ +++ + A+ G+A+ Y
Sbjct: 366 WNNRGVALADLGKYEEAIASFDKALQIKPDLHQAWLNRGIAVGESRHY 413
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 115/261 (44%), Gaps = 49/261 (18%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N GKY AI+ +D+ L+ P + +A RG A A E E AI+++ +A+Q
Sbjct: 300 NRGVALGNLGKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGEYEEAIANYDKALQFK 359
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A A LG+ EAI KAL+ +P+ RGI + + +N +
Sbjct: 360 PDFHYAWNNRGVALADLGKYEEAIASFDKALQIKPDLHQAWLNRGIAVGESRHYNP---E 416
Query: 506 LSACVKLDKENKSAYT---------YLGLALS---------------SIGEYKKA-EEAH 540
+ ++ N S Y G LS G+ +A AH
Sbjct: 417 AATSLQFQFPNTSPILPNPALTQRGYQGELLSYQEGLKHCLQDTHPEGWGQLHQAIGNAH 476
Query: 541 LKAIQLDRNFLEAWGH-LTQFYQDL------ANSEKALECLQQVLYIDKRFSKAYHLRGL 593
K + RN+ ++W +T+++Q L A E LE LQ ++ +
Sbjct: 477 YKEGKYQRNYRDSWDKAVTEYHQALITLTPDAYPELHLEVLQDLIRV------------- 523
Query: 594 LLHGLGQHKKAIKDLSSGLGI 614
L GL QH +A + + GL +
Sbjct: 524 -LLGLNQHTEAKEWRNQGLKV 543
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L + + I D+ +++ A R + LA L ++ N+ KA++I Q
Sbjct: 240 LGEYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQI------QPD 293
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
+ + NR L ++ I + DKALQ+ P QA+ ++G A + LG EEA++ ++
Sbjct: 294 KHEAWYNRGVALGNLGKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGEYEEAIANYD 353
Query: 128 KG 129
K
Sbjct: 354 KA 355
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 15/135 (11%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L K + I D+ +++ A R + LA L ++ N+ KA++I Y
Sbjct: 206 LGKYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDFHQAWY 265
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR + L ++ I + DKALQ+ P +A+ +G A LG+ EEA++
Sbjct: 266 ------NRGVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVALGNLGKYEEAIA--- 316
Query: 128 KGYEHALHQSADLKQ 142
Y+ AL D Q
Sbjct: 317 -NYDKALQIQPDFHQ 330
>gi|359461182|ref|ZP_09249745.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 595
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 125/251 (49%), Gaps = 14/251 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A V+ G+Y A+ FD+ LK P YPE RG A + AIS F A+ N
Sbjct: 303 NRGVALVDLGRYTEAVESFDKALKYRPDYPELWNNRGVAFENLGQYAEAISSFDRALAIN 362
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A RG A L + +AI +K +E +P+ + +G+ F + A+E
Sbjct: 363 SNDIQAHYNRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAWYNKGVALFNLGMYEEALES 422
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
++++ A+T+ G L +G Y++A ++ KA+++ + E W GHL
Sbjct: 423 WEQTIEIEPNFHEAWTHRGSVLGHLGLYEEAITSYNKALKIKPDLYETWNKRGIALGHLD 482
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
Q +++A+ + L I F +A++ RG L +G+HK+A+ + + L + P++
Sbjct: 483 Q-------NKEAISSFDKTLEIKPDFYEAWNNRGAALDNIGRHKEAVSNYNKALELKPND 535
Query: 619 IECLYLRASCY 629
Y +A CY
Sbjct: 536 PMIFYNKACCY 546
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 125/283 (44%), Gaps = 40/283 (14%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
E Y SAI +DQ L P Y +A RG A + A++ +A++ PS EAW
Sbjct: 243 EADYQSAIRAYDQALNFKPNYHQAWYNRGIAYNHLEMHQEAVASCDKALELQPSKYEAWN 302
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS------ 507
RG A LG EA++ KAL++ P+ ++ + RG+ F++ E +S
Sbjct: 303 NRGVALVDLGRYTEAVESFDKALKYRPDYPELWNNRGVA---FENLGQYAEAISSFDRAL 359
Query: 508 ---------------ACVKLDKENKS----------------AYTYLGLALSSIGEYKKA 536
A KLD+ K+ A+ G+AL ++G Y++A
Sbjct: 360 AINSNDIQAHYNRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAWYNKGVALFNLGMYEEA 419
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
E+ + I+++ NF EAW H L E+A+ + L I + ++ RG+ L
Sbjct: 420 LESWEQTIEIEPNFHEAWTHRGSVLGHLGLYEEAITSYNKALKIKPDLYETWNKRGIALG 479
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L Q+K+AI L I P E R + IG ++EAV
Sbjct: 480 HLDQNKEAISSFDKTLEIKPDFYEAWNNRGAALDNIGRHKEAV 522
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 106/218 (48%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
GT A + + ++AI + +A+ P+ +AW RG A L EA+ KALE +P+
Sbjct: 237 GTLFAAEADYQSAIRAYDQALNFKPNYHQAWYNRGIAYNHLEMHQEAVASCDKALELQPS 296
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + RG+ + AVE +K + + G+A ++G+Y +A +
Sbjct: 297 KYEAWNNRGVALVDLGRYTEAVESFDKALKYRPDYPELWNNRGVAFENLGQYAEAISSFD 356
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+A+ ++ N ++A + + L EKA+ +V+ I KA++ +G+ L LG +
Sbjct: 357 RALAINSNDIQAHYNRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAWYNKGVALFNLGMY 416
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++A++ + I+P+ E R S +G Y EA+
Sbjct: 417 EEALESWEQTIEIEPNFHEAWTHRGSVLGHLGLYEEAI 454
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA ++ AIS ++++++ P +A +G A E A+ + + I+
Sbjct: 371 NRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAWYNKGVALFNLGMYEEALESWEQTIEIE 430
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW RG LG EAI +KAL+ +P+ + ++RGI A+
Sbjct: 431 PNFHEAWTHRGSVLGHLGLYEEAITSYNKALKIKPDLYETWNKRGIALGHLDQNKEAISS 490
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G AL +IG +K+A + KA++L N + + Y +
Sbjct: 491 FDKTLEIKPDFYEAWNNRGAALDNIGRHKEAVSNYNKALELKPNDPMIFYNKACCYALQS 550
Query: 566 NSEKALECL 574
N+E A+E L
Sbjct: 551 NTEDAIEYL 559
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + G Y AI+ +++ LK P E RG A + + AIS F + ++ P
Sbjct: 440 RGSVLGHLGLYEEAITSYNKALKIKPDLYETWNKRGIALGHLDQNKEAISSFDKTLEIKP 499
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG A +G EA+ + +KALE +PN I + +
Sbjct: 500 DFYEAWNNRGAALDNIGRHKEAVSNYNKALELKPNDPMIFYNK----------------- 542
Query: 507 SACVKLDKENKSAYTYLGLALS 528
+ C L + A YL LA++
Sbjct: 543 ACCYALQSNTEDAIEYLSLAIA 564
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 15 KTHKTICEIDELV-RVDSVMASAITARIELAKLCSLR-NWSKAIRILDSLL--AQSYEIQ 70
+THK I EI EL+ + S EL L + ++ AIR D L +Y Q
Sbjct: 208 RTHK-ILEIRELLDEIPSSSNQRSGLFFELGTLFAAEADYQSAIRAYDQALNFKPNYH-Q 265
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
NR Y+ LE+H+ + CDKAL+L P+ +A+ +G A LGR EA+ ++K
Sbjct: 266 AWYNRGIAYNHLEMHQEAVASCDKALELQPSKYEAWNNRGVALVDLGRYTEAVESFDKAL 325
Query: 131 EH 132
++
Sbjct: 326 KY 327
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 48 SLRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
+L +++AI D LA S +IQ NR + +L+ H+ I +K +++ P +A+
Sbjct: 344 NLGQYAEAISSFDRALAINSNDIQAHYNRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAW 403
Query: 107 ILKGCAFSALGRKEEALSVWEKGYE 131
KG A LG EEAL WE+ E
Sbjct: 404 YNKGVALFNLGMYEEALESWEQTIE 428
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQ 575
LG ++ +Y+ A A+ +A+ N+ +AW HL + +A+ +KALE LQ
Sbjct: 236 LGTLFAAEADYQSAIRAYDQALNFKPNYHQAWYNRGIAYNHLEMHQEAVASCDKALE-LQ 294
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
Y +A++ RG+ L LG++ +A++ L P E R + +G+Y
Sbjct: 295 PSKY------EAWNNRGVALVDLGRYTEAVESFDKALKYRPDYPELWNNRGVAFENLGQY 348
Query: 636 REAV 639
EA+
Sbjct: 349 AEAI 352
>gi|427715575|ref|YP_007063569.1| hypothetical protein Cal7507_0234 [Calothrix sp. PCC 7507]
gi|427348011|gb|AFY30735.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 607
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 129/251 (51%), Gaps = 8/251 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ +++ L+ +P + EA R AR F + + AI+D+ A+Q NP E++ RG
Sbjct: 54 YHGAIADYNRALQINPNFAEAYSNRANARYFLEDYQGAIADYNRALQINPHLSESYHGRG 113
Query: 457 QARAALGESVEAIQDLSKALEFEP--------NSADILHERGIVNFKFKDFNAAVEDLSA 508
+A ALG+ AI D +AL+ P + A+ H +G+ D A+ D +
Sbjct: 114 KASKALGDYETAIADYRQALQINPQLTSYINIDIANAYHNQGVSRCDQGDNQGAIADFNQ 173
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++L +AY+ G A +G+Y +A +A++L+ EA+ +L Y L + +
Sbjct: 174 ALQLHPHFAAAYSNRGNAYHLLGDYHQAIADQNQALKLEPKLAEAYHNLGNAYYSLGDYQ 233
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
A+ + L I F+ AY+ RGL+ + ++ +A+ D S + ++P +++ R
Sbjct: 234 SAIANYNRALEIKPEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPDDVQAYCERGLV 293
Query: 629 YHAIGEYREAV 639
+ ++G Y+ A+
Sbjct: 294 HSSLGNYQGAI 304
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+++ ++G AI+ F+Q L+ P + A RG A + AI+D +A++
Sbjct: 153 NQGVSRCDQGDNQGAIADFNQALQLHPHFAAAYSNRGNAYHLLGDYHQAIADQNQALKLE 212
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ G A +LG+ AI + ++ALE +P A + RG+V K+++ A+ D
Sbjct: 213 PKLAEAYHNLGNAYYSLGDYQSAIANYNRALEIKPEFAGAYYNRGLVFAHIKEYDQALAD 272
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S VKL+ ++ AY GL SS+G Y+ A + +A+Q + +G + LA
Sbjct: 273 FSEAVKLNPDDVQAYCERGLVHSSLGNYQGAIADYDQALQKNPTLGLVYGFRANAKRRLA 332
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+E ++L ++ ++ Y R + LG ++ AIKD L D + Y R
Sbjct: 333 DYQGAIEDSTRLLRLNPLLAEGYCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGR 392
Query: 626 ASCYHAIGEYREAV 639
Y A+ +Y+ A+
Sbjct: 393 GIVYEAMQDYQRAI 406
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 127/252 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A + G Y SAI+ +++ L+ P + A RG A +E + A++DF+EA++ NP
Sbjct: 223 GNAYYSLGDYQSAIANYNRALEIKPEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPD 282
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ RG ++LG AI D +AL+ P + R + D+ A+ED +
Sbjct: 283 DVQAYCERGLVHSSLGNYQGAIADYDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDST 342
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ Y +A S+G+Y+ A + + +A+ D N A+ Y+ + +
Sbjct: 343 RLLRLNPLLAEGYCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQDY 402
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
++A+ Q + I+ FS AY RG LG + AI D + L I+P E Y RAS
Sbjct: 403 QRAIADNTQAIKIEPNFSPAYCNRGNARRLLGDEQGAIADYNQALQINPDFGEAYYNRAS 462
Query: 628 CYHAIGEYREAV 639
+A+ +YR A+
Sbjct: 463 IRYALKDYRGAI 474
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 123/240 (51%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TR+ + + + R +A+ + G Y AI +D+ L D A GRG ++
Sbjct: 342 TRLLRLNPLLAEGYCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQD 401
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D T+AI+ P+ A+ RG AR LG+ AI D ++AL+ P+ + + R
Sbjct: 402 YQRAIADNTQAIKIEPNFSPAYCNRGNARRLLGDEQGAIADYNQALQINPDFGEAYYNRA 461
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + KD+ A+ D + ++L+ + + Y+ G A ++ +Y+ A + +AI L+ +F
Sbjct: 462 SIRYALKDYRGAIADYTQALRLNPHSAAFYSDRGNAHYALEDYQGAIADYNQAIALEPSF 521
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ W + + L + + AL L+Q L + +++AY +R + LG +KAI D +
Sbjct: 522 ADDWFNRGRSRSLLGDLQGALVDLKQALELQPHWAEAYIVRADVYRNLGDTQKAIADFQA 581
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 128/287 (44%), Gaps = 34/287 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + G Y AI+ +DQ L+++P R A+ + + AI D T ++ NP
Sbjct: 290 RGLVHSSLGNYQGAIADYDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDSTRLLRLNP 349
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E + R AR +LG+ AI+D +AL F+ N A + RGIV +D+ A+ D
Sbjct: 350 LLAEGYCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQDYQRAIADN 409
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------------ 554
+ +K++ AY G A +G+ + A + +A+Q++ +F EA+
Sbjct: 410 TQAIKIEPNFSPAYCNRGNARRLLGDEQGAIADYNQALQINPDFGEAYYNRASIRYALKD 469
Query: 555 ---------------GHLTQFYQDLANSEKALECLQ-------QVLYIDKRFSKAYHLRG 592
H FY D N+ ALE Q Q + ++ F+ + RG
Sbjct: 470 YRGAIADYTQALRLNPHSAAFYSDRGNAHYALEDYQGAIADYNQAIALEPSFADDWFNRG 529
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG + A+ DL L + P E +RA Y +G+ ++A+
Sbjct: 530 RSRSLLGDLQGALVDLKQALELQPHWAEAYIVRADVYRNLGDTQKAI 576
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 134/274 (48%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +++ I +F +RG+ + +Y A++ F + +K +P +A RG
Sbjct: 235 AIANYNRALEIKPEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPDDVQAYCERGLVH 294
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AI+D+ +A+Q NP+ G + R A+ L + AI+D ++ L P A+
Sbjct: 295 SSLGNYQGAIADYDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDSTRLLRLNPLLAEG 354
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+R + D+ A++D + D +AY G+ ++ +Y++A + +AI+
Sbjct: 355 YCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQDYQRAIADNTQAIK 414
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ NF A+ + + L + + A+ Q L I+ F +AY+ R + + L ++ AI
Sbjct: 415 IEPNFSPAYCNRGNARRLLGDEQGAIADYNQALQINPDFGEAYYNRASIRYALKDYRGAI 474
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + L ++P + R + ++A+ +Y+ A+
Sbjct: 475 ADYTQALRLNPHSAAFYSDRGNAHYALEDYQGAI 508
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 123/251 (49%), Gaps = 8/251 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS--------A 448
Y AI+ +++ L+ +P E+ GRG A + E AI+D+ +A+Q NP
Sbjct: 88 YQGAIADYNRALQINPHLSESYHGRGKASKALGDYETAIADYRQALQINPQLTSYINIDI 147
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
A+ +G +R G++ AI D ++AL+ P+ A RG D++ A+ D +
Sbjct: 148 ANAYHNQGVSRCDQGDNQGAIADFNQALQLHPHFAAAYSNRGNAYHLLGDYHQAIADQNQ 207
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+KL+ + AY LG A S+G+Y+ A + +A+++ F A+ + + + +
Sbjct: 208 ALKLEPKLAEAYHNLGNAYYSLGDYQSAIANYNRALEIKPEFAGAYYNRGLVFAHIKEYD 267
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
+AL + + ++ +AY RGL+ LG ++ AI D L +P+ RA+
Sbjct: 268 QALADFSEAVKLNPDDVQAYCERGLVHSSLGNYQGAIADYDQALQKNPTLGLVYGFRANA 327
Query: 629 YHAIGEYREAV 639
+ +Y+ A+
Sbjct: 328 KRRLADYQGAI 338
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA-RAALGESVEAIQD 471
M E L +G + FQ E E AI+ +T+AI+ +P EA+ R + + + AI D
Sbjct: 1 MKAEDLFNQGLNKNFQGEFEEAIAYYTQAIELDPDYAEAYHNRAIILSSGIKDYHGAIAD 60
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
++AL+ PN A+ R + +D+ A+ D + ++++ +Y G A ++G
Sbjct: 61 YNRALQINPNFAEAYSNRANARYFLEDYQGAIADYNRALQINPHLSESYHGRGKASKALG 120
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ-DLANS--------------EKALECLQQ 576
+Y+ A + +A+Q++ LT + D+AN+ + A+ Q
Sbjct: 121 DYETAIADYRQALQINP-------QLTSYINIDIANAYHNQGVSRCDQGDNQGAIADFNQ 173
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L + F+ AY RG H LG + +AI D + L ++P E + + Y+++G+Y+
Sbjct: 174 ALQLHPHFAAAYSNRGNAYHLLGDYHQAIADQNQALKLEPKLAEAYHNLGNAYYSLGDYQ 233
Query: 637 EAV 639
A+
Sbjct: 234 SAI 236
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ + Q L+ +P RG A + + AI+D+ +AI PS + W RG
Sbjct: 470 YRGAIADYTQALRLNPHSAAFYSDRGNAHYALEDYQGAIADYNQAIALEPSFADDWFNRG 529
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++R+ LG+ A+ DL +ALE +P+ A+ R V D A+ D A L
Sbjct: 530 RSRSLLGDLQGALVDLKQALELQPHWAEAYIVRADVYRNLGDTQKAIADFQASADL 585
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S F RG A Y AI+ ++Q + +P + + RG +R+ +L+ A+ D
Sbjct: 487 SAAFYSDRGNAHYALEDYQGAIADYNQAIALEPSFADDWFNRGRSRSLLGDLQGALVDLK 546
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+A++ P EA+ R LG++ +AI D SAD+ +++G
Sbjct: 547 QALELQPHWAEAYIVRADVYRNLGDTQKAIADFQA-------SADLYYKQG 590
>gi|376003788|ref|ZP_09781591.1| TPR repeat-containing protein [Arthrospira sp. PCC 8005]
gi|375327819|emb|CCE17344.1| TPR repeat-containing protein [Arthrospira sp. PCC 8005]
Length = 553
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 124/255 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A + G+Y A+S +D+ LK P + E RG A E + AIS + +A++
Sbjct: 272 FNRGKALSDLGEYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQAISSYDQALKY 331
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG A + LGE +AI +AL+++P+ + RG ++ A+
Sbjct: 332 KPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLGEYKQAIS 391
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K ++ A+ G+ALS +GEYK+A ++ +A++ +F AW + L
Sbjct: 392 SYDQALKYKPDDHVAWYNRGVALSYLGEYKQAISSYDQALKYKPDFHVAWYNRGNALSYL 451
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ + L + A++ RG L LG++K+AI L P E Y
Sbjct: 452 GEYKQAISSYDEALKYKPDYHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDLHEAWYN 511
Query: 625 RASCYHAIGEYREAV 639
R +GEY++A+
Sbjct: 512 RGVALSDLGEYKQAI 526
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 122/255 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
SRG A + GKY A+S +DQ LK P +A RG A + E + A+S + EA++
Sbjct: 238 FSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQALSSYDEALKY 297
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P E W RG A LGE +AI +AL+++P+ + RG ++ A+
Sbjct: 298 KPDFHEPWFSRGNALYHLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLGEYKQAIS 357
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K ++ A+ G ALS +GEYK+A ++ +A++ + AW + L
Sbjct: 358 SYDQALKYKPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGVALSYL 417
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ Q L F A++ RG L LG++K+AI L P Y
Sbjct: 418 GEYKQAISSYDQALKYKPDFHVAWYNRGNALSYLGEYKQAISSYDEALKYKPDYHVAWYN 477
Query: 625 RASCYHAIGEYREAV 639
R + +GEY++A+
Sbjct: 478 RGNALSYLGEYKQAI 492
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 125/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G+Y AIS +DQ LK P +A RG A + E A+S + +A++
Sbjct: 205 NRGVALSYSGEYKQAISSYDQALKYKPDLHKAWFSRGNALYHLGKYEQALSSYDQALKYK 264
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG+A + LGE +A+ +AL+++P+ + RG + ++ A+
Sbjct: 265 PDLHKAWFNRGKALSDLGEYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQAISS 324
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K ++ A+ G ALS +GEYK+A ++ +A++ + AW + L
Sbjct: 325 YDQALKYKPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLG 384
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ Q L A++ RG+ L LG++K+AI L P Y R
Sbjct: 385 EYKQAISSYDQALKYKPDDHVAWYNRGVALSYLGEYKQAISSYDQALKYKPDFHVAWYNR 444
Query: 626 ASCYHAIGEYREAV 639
+ +GEY++A+
Sbjct: 445 GNALSYLGEYKQAI 458
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 114/232 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
SRG A + G+Y AIS +DQ LK P A RG A ++ E + AIS + +A++
Sbjct: 306 FSRGNALYHLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLGEYKQAISSYDQALKY 365
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG A + LGE +AI +AL+++P+ + RG+ ++ A+
Sbjct: 366 KPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGVALSYLGEYKQAIS 425
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K + A+ G ALS +GEYK+A ++ +A++ ++ AW + L
Sbjct: 426 SYDQALKYKPDFHVAWYNRGNALSYLGEYKQAISSYDEALKYKPDYHVAWYNRGNALSYL 485
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++A+ Q L +A++ RG+ L LG++K+AI L P
Sbjct: 486 GEYKQAISSYDQALKYKPDLHEAWYNRGVALSDLGEYKQAISSFDQALKYKP 537
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+Y AIS +DQ LK P A RG A ++ E + AIS + +A++
Sbjct: 341 NRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYK 400
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A + LGE +AI +AL+++P+ + RG ++ A+
Sbjct: 401 PDDHVAWYNRGVALSYLGEYKQAISSYDQALKYKPDFHVAWYNRGNALSYLGEYKQAISS 460
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A+ G ALS +GEYK+A ++ +A++ + EAW + DL
Sbjct: 461 YDEALKYKPDYHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDLHEAWYNRGVALSDLG 520
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
++A+ Q L + KA
Sbjct: 521 EYKQAISSFDQALKYKPDYHKA 542
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + + G AIS F++ ++ P +A RG A ++ E + AIS + +A++ P
Sbjct: 173 GLQRYDNGDVRGAISSFEKAIEFQPDDHKAWYNRGVALSYSGEYKQAISSYDQALKYKPD 232
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+AW RG A LG+ +A+ +AL+++P+ RG ++ A+
Sbjct: 233 LHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQALSSYD 292
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+K + + G AL +GEYK+A ++ +A++ + AW + L
Sbjct: 293 EALKYKPDFHEPWFSRGNALYHLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLGEY 352
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
++A+ Q L A++ RG L LG++K+AI L P + Y R
Sbjct: 353 KQAISSYDQALKYKPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGV 412
Query: 628 CYHAIGEYREAV 639
+GEY++A+
Sbjct: 413 ALSYLGEYKQAI 424
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W G R G+ AI KA+EF+P+ + RG+ ++ A+ +K
Sbjct: 169 WFNDGLQRYDNGDVRGAISSFEKAIEFQPDDHKAWYNRGVALSYSGEYKQAISSYDQALK 228
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ A+ G AL +G+Y++A ++ +A++ + +AW + + DL ++AL
Sbjct: 229 YKPDLHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQAL 288
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+ L F + + RG L+ LG++K+AI L P + Y R +
Sbjct: 289 SSYDEALKYKPDFHEPWFSRGNALYHLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSY 348
Query: 632 IGEYREAV 639
+GEY++A+
Sbjct: 349 LGEYKQAI 356
>gi|355570991|ref|ZP_09042261.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
tarda NOBI-1]
gi|354826273|gb|EHF10489.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
tarda NOBI-1]
Length = 1104
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 157/665 (23%), Positives = 271/665 (40%), Gaps = 88/665 (13%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKL----CSLRNWSKAIRILDSLLAQSY 67
LN+ I + V +D+ A R +E A++ ++ ++SKAI L+ A +Y
Sbjct: 84 LNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYELAIADFSKAIS-LNPSYAAAY 142
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS--- 124
NR +++ +H+ I D +A +LDP+ +A +G FS LG E+A++
Sbjct: 143 N-----NRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIEFSRLGHFEDAVADYT 197
Query: 125 ------------VWEKGYEHA-LHQS-ADLKQFLE-LEELLTAAKQDRSVTCEYDVSNSM 169
++ +G + L QS A + +L+ LE+ + A+ ++ EY
Sbjct: 198 RALEITPEKADILYNRGLAYGKLGQSEAAIADYLQCLEKNPSYAEAHNNLGVEY------ 251
Query: 170 SSLTVSESGLNANDKMSETS----ENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRS 225
S L + E+ L+ K E + E +N + + D E ++ S ++ S
Sbjct: 252 SHLGLLETALDHYAKAIEINPSFVEAYNNRGVLFNRMGRFD--EAIAEFSRALEII---S 306
Query: 226 DEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRD-----------ASEIN 274
+E + + P ++ L + G + ++T + EIN
Sbjct: 307 EETQAEAVTPQPEASLSGMAAETAPGQGAPGGEEKGETTIPPVEELVEDPAIRQLTDEIN 366
Query: 275 RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSIS 334
R S DD ++ N + R G+ D + D + Y + +
Sbjct: 367 R-SPDDPELYN---RRGVEYSRLGQSEKAIEDFTRAIDIDPGYIEAYFNRGNEYDRLGMV 422
Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNE 394
D +D T + K N KF + +RGI
Sbjct: 423 DEAIADYTHA-----------------LKINPKFA------------EACFARGIEYQKA 453
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
AIS F + L+ P YP+AL RG A + A+ DF+ A++ EA
Sbjct: 454 NLSDRAISEFTKALEIRPAYPDALYQRGCEFAKIGLSDMAVRDFSRALEIRGQFFEALVA 513
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R + + G S A +DL+ AL EP SA + RGI + A+ D S + ++
Sbjct: 514 RAEQYSRKGLSERATEDLTAALALEPTSAGLYVRRGIEQSRSGKIEEALADFSKAIGMEP 573
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N AY L L G ++++ + I+L +A+ + +L NS +A+
Sbjct: 574 SNADAYFQRALILQKQGRFEESASDISRVIELRPADAQAYLFRGRQNSELGNSSEAIADF 633
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ L ID R AY RG GQ +KA++D S+ + ++ ++E L RA+ Y +G
Sbjct: 634 SRALEIDPRLFDAYIGRGQERSRCGQPEKAVEDYSNAIRLNGRSVEALTARATEYSRLGR 693
Query: 635 YREAV 639
Y +AV
Sbjct: 694 YEDAV 698
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 150/640 (23%), Positives = 250/640 (39%), Gaps = 65/640 (10%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKL----CSLRNWSKAIRILDSLLAQS 66
+ N + + I E + + + A+ R E AK+ ++R++S+A+ I
Sbjct: 452 KANLSDRAISEFTKALEIRPAYPDALYQRGCEFAKIGLSDMAVRDFSRALEIRGQFF--- 508
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
+ + RA YS+ L + D AL L+PT Y+ +G S G+ EEAL+ +
Sbjct: 509 ---EALVARAEQYSRKGLSERATEDLTAALALEPTSAGLYVRRGIEQSRSGKIEEALADF 565
Query: 127 EK--GYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDK 184
K G E + +AD + L KQ R D+S + L D
Sbjct: 566 SKAIGMEPS---NADAY----FQRALILQKQGRFEESASDISRVIE--------LRPADA 610
Query: 185 MSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDE----AKGGSSVPVSKSG 240
+ S++ +SS D S D GR E + +V +
Sbjct: 611 QAYLFRGRQNSELGNSSEAIADFSRALEIDPRLFDAYIGRGQERSRCGQPEKAVEDYSNA 670
Query: 241 LHINGK-LREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGR 299
+ +NG+ + ++ S + A D S Q+ D I + + + ER G
Sbjct: 671 IRLNGRSVEALTARATEYSRLGRYEDAVEDLSRALEQAPGDVSIL---LARGLLYERLGM 727
Query: 300 QTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETS 359
D YSK D + +R L + E
Sbjct: 728 IDEAIAD---------------------YSKVIEIDPGHEKAYINRGNLLAGKGLSSEAI 766
Query: 360 NEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
+ R V I+ +++ +RGI G AI + + P EA
Sbjct: 767 ADFSR-----VIEINPGNAVAF---YNRGIEYGERGMLDEAIMDLGKAVMLRPDLAEAYY 818
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG A + LE AI+D+ A++ +P +A+ RG A AALG EAI+D S+A+E
Sbjct: 819 NRGVAYHKKGMLEEAIADYNRALELSPDNEKAYNNRGNAHAALGMYDEAIEDFSRAIEIN 878
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P++ + RGI K A+ED S + + + AY G+A + Y++A
Sbjct: 879 PDNPTAYYNRGIEYGKKGLIEKAMEDFSRAIAIKPDLAEAYYNRGVAYQRVERYEEAIAD 938
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +AIQ+ +A+ + + L +A+ + + I+ AY+ RG+ G
Sbjct: 939 YSRAIQISPANEKAYNNRGNAHAALGMYNEAVSDFSRAIEINPDNPTAYYNRGIEYGKKG 998
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI D S +G+ P E Y + Y+ REA+
Sbjct: 999 FFDEAIADFSKAVGLRPDLAEAYYNMGNIYYNRNMCREAI 1038
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 107/224 (47%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E RG A + + AI+D+T AI+ NP EA+ RG A+A + AI+D S A
Sbjct: 4 EIYYNRGIAYHKKGLFDEAIADYTRAIEINPDDAEAYHNRGVAKAGKHDYPGAIEDYSAA 63
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ P+ ++ + RG+ A+ D ++ V LD + AY GL + IGEY+
Sbjct: 64 IRINPHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYEL 123
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A KAI L+ ++ A+ + + EKA+E + +D FS+A RG+
Sbjct: 124 AIADFSKAISLNPSYAAAYNNRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIEF 183
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG + A+ D + L I P + LY R Y +G+ A+
Sbjct: 184 SRLGHFEDAVADYTRALEITPEKADILYNRGLAYGKLGQSEAAI 227
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 117/229 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + +AIS F + D + EA RG A E E AI+DF++AI N
Sbjct: 76 NRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYELAIADFSKAISLN 135
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A+ RG A G +AI+D ++A E +P+ ++ L RGI + F AV D
Sbjct: 136 PSYAAAYNNRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIEFSRLGHFEDAVAD 195
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +++ E GLA +G+ + A +L+ ++ + ++ EA +L Y L
Sbjct: 196 YTRALEITPEKADILYNRGLAYGKLGQSEAAIADYLQCLEKNPSYAEAHNNLGVEYSHLG 255
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
E AL+ + + I+ F +AY+ RG+L + +G+ +AI + S L I
Sbjct: 256 LLETALDHYAKAIEINPSFVEAYNNRGVLFNRMGRFDEAIAEFSRALEI 304
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 123/267 (46%), Gaps = 6/267 (2%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
+ S + RGI Q GK A++ F + + +P +A R Q E + S
Sbjct: 538 EPTSAGLYVRRGIEQSRSGKIEEALADFSKAIGMEPSNADAYFQRALILQKQGRFEESAS 597
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D + I+ P+ +A+ RG+ + LG S EAI D S+ALE +P D RG +
Sbjct: 598 DISRVIELRPADAQAYLFRGRQNSELGNSSEAIADFSRALEIDPRLFDAYIGRGQERSRC 657
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEA 553
AVED S ++L+ + A T S +G Y+ A E +A++ D + L A
Sbjct: 658 GQPEKAVEDYSNAIRLNGRSVEALTARATEYSRLGRYEDAVEDLSRALEQAPGDVSILLA 717
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
G L Y+ L ++A+ +V+ ID KAY RG LL G G +AI D S +
Sbjct: 718 RGLL---YERLGMIDEAIADYSKVIEIDPGHEKAYINRGNLLAGKGLSSEAIADFSRVIE 774
Query: 614 IDPSNIECLYLRASCYHAIGEYREAVI 640
I+P N Y R Y G EA++
Sbjct: 775 INPGNAVAFYNRGIEYGERGMLDEAIM 801
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 122/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ + Y AI + ++ +P + EA RG A + E AISDFT A+ +
Sbjct: 42 NRGVAKAGKHDYPGAIEDYSAAIRINPHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLD 101
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EA+ RG A +GE AI D SKA+ P+ A + RG+++ + A+ED
Sbjct: 102 TDFVEAYYNRGLEYARIGEYELAIADFSKAISLNPSYAAAYNNRGVIHARRGMHEKAIED 161
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +LD A G+ S +G ++ A + +A+++ + + Y L
Sbjct: 162 YTRAFELDPSFSEALFNRGIEFSRLGHFEDAVADYTRALEITPEKADILYNRGLAYGKLG 221
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
SE A+ Q L + +++A++ G+ LG + A+ + + I+PS +E R
Sbjct: 222 QSEAAIADYLQCLEKNPSYAEAHNNLGVEYSHLGLLETALDHYAKAIEINPSFVEAYNNR 281
Query: 626 ASCYHAIGEYREAV 639
++ +G + EA+
Sbjct: 282 GVLFNRMGRFDEAI 295
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%)
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
GE + RG A G EAI D ++A+E P+ A+ H RG+ D+ A+ED SA
Sbjct: 3 GEIYYNRGIAYHKKGLFDEAIADYTRAIEINPDDAEAYHNRGVAKAGKHDYPGAIEDYSA 62
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++++ A+ G+A S + + A A+ LD +F+EA+ + Y + E
Sbjct: 63 AIRINPHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYE 122
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
A+ + + ++ ++ AY+ RG++ G H+KAI+D + +DPS E L+ R
Sbjct: 123 LAIADFSKAISLNPSYAAAYNNRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIE 182
Query: 629 YHAIGEYREAV 639
+ +G + +AV
Sbjct: 183 FSRLGHFEDAV 193
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 116/236 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA +G + AI+ + + ++ +P EA RG A+A + + AI D++ AI+ N
Sbjct: 8 NRGIAYHKKGLFDEAIADYTRAIEINPDDAEAYHNRGVAKAGKHDYPGAIEDYSAAIRIN 67
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG A + L AI D + A+ + + + + RG+ + ++ A+ D
Sbjct: 68 PHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYELAIAD 127
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ +AY G+ + G ++KA E + +A +LD +F EA + + L
Sbjct: 128 FSKAISLNPSYAAAYNNRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIEFSRLG 187
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ E A+ + L I + + RGL LGQ + AI D L +PS E
Sbjct: 188 HFEDAVADYTRALEITPEKADILYNRGLAYGKLGQSEAAIADYLQCLEKNPSYAEA 243
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G Y AI F + ++ +P P A RG + +E A+ DF+ AI
Sbjct: 853 NRGNAHAALGMYDEAIEDFSRAIEINPDNPTAYYNRGIEYGKKGLIEKAMEDFSRAIAIK 912
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG A + EAI D S+A++ P + + RG + +N AV D
Sbjct: 913 PDLAEAYYNRGVAYQRVERYEEAIADYSRAIQISPANEKAYNNRGNAHAALGMYNEAVSD 972
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++++ +N +AY G+ G + +A KA+ L + EA+ ++ Y +
Sbjct: 973 FSRAIEINPDNPTAYYNRGIEYGKKGFFDEAIADFSKAVGLRPDLAEAYYNMGNIYYNRN 1032
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+A+ + L + +++A+ + L L ++AI
Sbjct: 1033 MCREAIREFDRALGVKPGYARAFLNKALAYEKLSMTEEAI 1072
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI +G A+ F + + P EA RG A E AI+D++ AIQ +
Sbjct: 887 NRGIEYGKKGLIEKAMEDFSRAIAIKPDLAEAYYNRGVAYQRVERYEEAIADYSRAIQIS 946
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG A AALG EA+ D S+A+E P++ + RGI K F+ A+ D
Sbjct: 947 PANEKAYNNRGNAHAALGMYNEAVSDFSRAIEINPDNPTAYYNRGIEYGKKGFFDEAIAD 1006
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S V L + AY +G + ++A +A+ + + A+ + Y+ L+
Sbjct: 1007 FSKAVGLRPDLAEAYYNMGNIYYNRNMCREAIREFDRALGVKPGYARAFLNKALAYEKLS 1066
Query: 566 NSEKALECLQQVLYIDKRFSK 586
+E+A+ + L + SK
Sbjct: 1067 MTEEAIAAYEGFLKFARNESK 1087
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ ++SKA+ + L Y + +I NR C + IR+ D+AL + P +A+
Sbjct: 1003 AIADFSKAVGLRPDLAEAYYNMGNIYYNRNMC-------REAIREFDRALGVKPGYARAF 1055
Query: 107 ILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFL 144
+ K A+ L EEA++ +E + A ++S +L F+
Sbjct: 1056 LNKALAYEKLSMTEEAIAAYEGFLKFARNESKELVDFV 1093
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 10 RYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSY-E 68
R R + K + + +R++ A+TAR + L + A+ L L Q+ +
Sbjct: 654 RSRCGQPEKAVEDYSNAIRLNGRSVEALTARA--TEYSRLGRYEDAVEDLSRALEQAPGD 711
Query: 69 IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
+ + R Y +L + I D K +++DP +AYI +G + G EA++ + +
Sbjct: 712 VSILLARGLLYERLGMIDEAIADYSKVIEIDPGHEKAYINRGNLLAGKGLSSEAIADFSR 771
>gi|218441625|ref|YP_002379954.1| serine/threonine protein kinase [Cyanothece sp. PCC 7424]
gi|218174353|gb|ACK73086.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
PCC 7424]
Length = 730
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 125/244 (51%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ ++ L +P P G+G A + + A+ + EAIQ P+ +AW R
Sbjct: 376 RYQDALQAYEASLDTNPNNPPTWKGKGDALQALKRYQNALEAYDEAIQLQPNYWQAWMER 435
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
+ LG++ EAI K ++F PN G + K +D+ A+ L+ ++++ +
Sbjct: 436 AEVLEKLGKNSEAIYSYEKVIDFTPNEWQAWQNLGEIQVKLQDYATALVSLNKSLQINPD 495
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
++ ++ G AL ++ Y++A +++ KA++++ +F +AW Y +L +A E +
Sbjct: 496 DEWSWYQKGFALQNLKNYEEAIKSYEKAVKINPSFSQAWYQKGNSYMNLEKYSQAGESYR 555
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
Q + +A++ +G+ L+ L ++++A+K G I P++ E Y +A + Y
Sbjct: 556 QAVQFQPDLYQAWYSQGIALNRLNRYREALKAFEEGTQIQPNSFEAWYQKAWTLQTLNRY 615
Query: 636 REAV 639
EAV
Sbjct: 616 GEAV 619
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++KS I+ D S +G A N Y AI +++ +K +P + +A +G +
Sbjct: 482 ALVSLNKSLQINPDDEWSWYQKGFALQNLKNYEEAIKSYEKAVKINPSFSQAWYQKGNSY 541
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ A + +A+Q P +AW +G A L EA++ + + +PNS +
Sbjct: 542 MNLEKYSQAGESYRQAVQFQPDLYQAWYSQGIALNRLNRYREALKAFEEGTQIQPNSFEA 601
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+++ + AVE + +L+ +N A+ G +L + +Y++A A+ + I
Sbjct: 602 WYQKAWTLQTLNRYGEAVEAYNTATRLNPKNPQAWYNKGNSLYLLEDYQQAIAAYQQVIS 661
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
LD++F AW L + L +A++ Q L
Sbjct: 662 LDKDFYPAWKSLGNSFFKLKRYSEAIKAYDQTL 694
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 105/219 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G QV YA+A+ ++ L+ +P + +G A + E AI + +A++ NPS
Sbjct: 470 GEIQVKLQDYATALVSLNKSLQINPDDEWSWYQKGFALQNLKNYEEAIKSYEKAVKINPS 529
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+AW ++G + L + +A + +A++F+P+ + +GI + + A++
Sbjct: 530 FSQAWYQKGNSYMNLEKYSQAGESYRQAVQFQPDLYQAWYSQGIALNRLNRYREALKAFE 589
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++ + A+ L ++ Y +A EA+ A +L+ +AW + L +
Sbjct: 590 EGTQIQPNSFEAWYQKAWTLQTLNRYGEAVEAYNTATRLNPKNPQAWYNKGNSLYLLEDY 649
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A+ QQV+ +DK F A+ G L ++ +AIK
Sbjct: 650 QQAIAAYQQVISLDKDFYPAWKSLGNSFFKLKRYSEAIK 688
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 109/245 (44%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK + AI +++++ P +A G + ++ A+ +++Q NP +W +
Sbjct: 443 GKNSEAIYSYEKVIDFTPNEWQAWQNLGEIQVKLQDYATALVSLNKSLQINPDDEWSWYQ 502
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A L EAI+ KA++ P+ + +++G + ++ A E V+
Sbjct: 503 KGFALQNLKNYEEAIKSYEKAVKINPSFSQAWYQKGNSYMNLEKYSQAGESYRQAVQFQP 562
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G+AL+ + Y++A +A + Q+ N EAW Q L +A+E
Sbjct: 563 DLYQAWYSQGIALNRLNRYREALKAFEEGTQIQPNSFEAWYQKAWTLQTLNRYGEAVEAY 622
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ + +A++ +G L+ L +++AI + +D + + +
Sbjct: 623 NTATRLNPKNPQAWYNKGNSLYLLEDYQQAIAAYQQVISLDKDFYPAWKSLGNSFFKLKR 682
Query: 635 YREAV 639
Y EA+
Sbjct: 683 YSEAI 687
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+A ++ +G ++ + + A++ A + + N + G AL ++ Y+ A EA+
Sbjct: 359 NNATKMYNKGNTLYQLQRYQDALQAYEASLDTNPNNPPTWKGKGDALQALKRYQNALEAY 418
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AIQL N+ +AW + + L + +A+ ++V+ +A+ G + L
Sbjct: 419 DEAIQLQPNYWQAWMERAEVLEKLGKNSEAIYSYEKVIDFTPNEWQAWQNLGEIQVKLQD 478
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ A+ L+ L I+P + Y + + Y EA+
Sbjct: 479 YATALVSLNKSLQINPDDEWSWYQKGFALQNLKNYEEAI 517
>gi|434387210|ref|YP_007097821.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428018200|gb|AFY94294.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 490
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 121/239 (50%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD +RGIA+++ G + A++ FD+++ P Y +A GRG R + +AA++DF
Sbjct: 201 NVDAFYNRGIAKLDLGDFTGALADFDRVIALRPNYAKAYNGRGKTRELMGDSQAALADFN 260
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AI NP++ A+ R A+ +LG AI D + P A R I+ + D
Sbjct: 261 RAIALNPNSSNAYFNRANAQNSLGNRTGAISDYDRVASINPTDAFAFFNRAIIKAENGDK 320
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D + +KL+ + AY G+ SSIG + A + +AIQL N+ A+ +
Sbjct: 321 TQAIADYTTALKLNPKLVEAYNNRGILYSSIGNRQAAIADYTQAIQLKPNYGTAYLNRGI 380
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
Y KA+ Q + D + + Y RG+ L L +++KA+ D ++ + + P+N
Sbjct: 381 VYYVAGEYRKAIADYTQGIASDPKNADLYFNRGVSLAQLQEYQKALADYNTAIRLQPNN 439
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 109/240 (45%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ F++ + + +A RG + + AI+D+T A+ NP EA+ RG AR
Sbjct: 85 AIADFNRAIALQSNFVDAYNNRGIVKGLNGDSTGAIADYTSALVLNPKFFEAYANRGFAR 144
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+G+ A+ D A +P + +GI+ + D A+ + ++LD +N A
Sbjct: 145 LNIGDRAGALADFQAASAIKPTDPQLAIGKGIILSQNGDKQGAIASYAQAIQLDPKNVDA 204
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G+A +G++ A + I L N+ +A+ + + + +S+ AL + +
Sbjct: 205 FYNRGIAKLDLGDFTGALADFDRVIALRPNYAKAYNGRGKTRELMGDSQAALADFNRAIA 264
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ S AY R + LG AI D I+P++ + RA G+ +A+
Sbjct: 265 LNPNSSNAYFNRANAQNSLGNRTGAISDYDRVASINPTDAFAFFNRAIIKAENGDKTQAI 324
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 1/260 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD +RGI + G AI+ + L +P + EA RG AR + A++DF
Sbjct: 100 VDAYNNRGIVKGLNGDSTGAIADYTSALVLNPKFFEAYANRGFARLNIGDRAGALADFQA 159
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A P+ + +G + G+ AI ++A++ +P + D + RGI DF
Sbjct: 160 ASAIKPTDPQLAIGKGIILSQNGDKQGAIASYAQAIQLDPKNVDAFYNRGIAKLDLGDFT 219
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D + L AY G +G+ + A +AI L+ N A+ +
Sbjct: 220 GALADFDRVIALRPNYAKAYNGRGKTRELMGDSQAALADFNRAIALNPNSSNAYFNRANA 279
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
L N A+ +V I+ + A+ R ++ G +AI D ++ L ++P +E
Sbjct: 280 QNSLGNRTGAISDYDRVASINPTDAFAFFNRAIIKAENGDKTQAIADYTTALKLNPKLVE 339
Query: 621 CLYLRASCYHAIGEYREAVI 640
R Y +IG R+A I
Sbjct: 340 AYNNRGILYSSIGN-RQAAI 358
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + G +AI+ + Q ++ P Y A + RG E AI+D+T+ I S+
Sbjct: 343 NRGILYSSIGNRQAAIADYTQAIQLKPNYGTAYLNRGIVYYVAGEYRKAIADYTQGIASD 402
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG + A L E +A+ D + A+ +PN+A RG++ + + +AA ED
Sbjct: 403 PKNADLYFNRGVSLAQLQEYQKALADYNTAIRLQPNNALAYSNRGLLQAQLQANSAATED 462
Query: 506 LSACVKL--DKENKSAY 520
L +L + N++AY
Sbjct: 463 LKTAARLFQAQNNQAAY 479
>gi|145528297|ref|XP_001449948.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417537|emb|CAK82551.1| unnamed protein product [Paramecium tetraurelia]
Length = 1001
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 139/275 (50%), Gaps = 6/275 (2%)
Query: 369 CV-TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
C+ + K+ SV + +G + +GK AI IFD+ ++ DP Y +G A
Sbjct: 313 CIDVALQKNPEYSVGY-FRKGYSLWQQGKNQDAIFIFDKAMQIDPSYASTYNYKGNALND 371
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ AI + +AIQ P+ A+ ++G A + L + EAI KA++ +PN A +
Sbjct: 372 LKQYNEAIVCYDKAIQIYPNDEVAYFKKGNALSDLKQYNEAIVCYDKAIQLDPNDASFYN 431
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G K +N A+ ++LD ++ Y G AL+++ +Y +A + KAIQ +
Sbjct: 432 NKGNALSDLKQYNEAIVCYDKAIQLDPNDEVNYFNKGNALNNLKQYNEAIVCYDKAIQFN 491
Query: 548 RNFLEAWGHLTQFY--QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+N+ + H ++ Y +L ++A+ C + ID ++ AY +G LH Q+K+AI
Sbjct: 492 KNY--SVAHFSKGYALHNLKQYDEAIVCYNNAIKIDPNYTSAYFNKGTTLHNFKQYKEAI 549
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
S+ + +DPS+ + + + +Y EA++
Sbjct: 550 VCYSNAIELDPSDASVYTHKGNALSDLKQYNEAIV 584
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 130/268 (48%), Gaps = 1/268 (0%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I +K+ SV S+G A N +Y AI ++ +K DP Y A +GT ++ +
Sbjct: 488 IQFNKNYSVA-HFSKGYALHNLKQYDEAIVCYNNAIKIDPNYTSAYFNKGTTLHNFKQYK 546
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI ++ AI+ +PS + +G A + L + EAI KA++ +PN ++G
Sbjct: 547 EAIVCYSNAIELDPSDASVYTHKGNALSDLKQYNEAIVCYDKAIQLDPNDEVAYFKKGNA 606
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
K +N A+ ++LD ++ AY G AL+ + +YK+A + KAIQL+ N
Sbjct: 607 LSDLKQYNIAIVFYDKAIQLDPNDEVAYYKKGSALNDLKQYKEAIFCYDKAIQLNPNCQV 666
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
A+ + QDL +++ C + + ID ++ Y +G +LH L +K A++ G+
Sbjct: 667 AYFNKGNTLQDLQQYNESIACYDKAIEIDPNQAEFYLQKGKVLHDLKNYKDALECYDKGI 726
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAVI 640
+D S + H + Y EA+
Sbjct: 727 KLDSSQTLIYNYKGRTLHNLKSYNEAIF 754
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G A + +Y AI +D+ ++ DP A +G+A ++ + AI + +AIQ
Sbjct: 601 FKKGNALSDLKQYNIAIVFYDKAIQLDPNDEVAYYKKGSALNDLKQYKEAIFCYDKAIQL 660
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ +G L + E+I KA+E +PN A+ ++G V K++ A+E
Sbjct: 661 NPNCQVAYFNKGNTLQDLQQYNESIACYDKAIEIDPNQAEFYLQKGKVLHDLKNYKDALE 720
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------L 557
+KLD Y Y G L ++ Y +A + AI+LDRN+ A+ + L
Sbjct: 721 CYDKGIKLDSSQTLIYNYKGRTLHNLKSYNEAIFYYNNAIKLDRNYAMAYNNKGRALHDL 780
Query: 558 TQF---------------------------YQDLANSEKALECLQQVLYIDKRFSKAYHL 590
Q+ DL +L+C + ID+ F+ AY+
Sbjct: 781 KQYNEAIISYDEAIKKDPSLAIAFNNKGRALHDLQKYNDSLQCYDTAIQIDQNFAIAYNN 840
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+G L+ L Q+ AI + IDP+ + H + +Y++A+
Sbjct: 841 KGRALYNLKQYTDAIVCYDKAIQIDPNFTIAYNNKGKALHNLKQYKDAI 889
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G A N +Y AI +D+ ++ + Y A +G A ++ + AI + AI+
Sbjct: 465 FNKGNALNNLKQYNEAIVCYDKAIQFNKNYSVAHFSKGYALHNLKQYDEAIVCYNNAIKI 524
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ +G + EAI S A+E +P+ A + +G K +N A+
Sbjct: 525 DPNYTSAYFNKGTTLHNFKQYKEAIVCYSNAIELDPSDASVYTHKGNALSDLKQYNEAIV 584
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++LD ++ AY G ALS + +Y A + KAIQLD N A+ DL
Sbjct: 585 CYDKAIQLDPNDEVAYFKKGNALSDLKQYNIAIVFYDKAIQLDPNDEVAYYKKGSALNDL 644
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ C + + ++ AY +G L L Q+ ++I + IDP+ E
Sbjct: 645 KQYKEAIFCYDKAIQLNPNCQVAYFNKGNTLQDLQQYNESIACYDKAIEIDPNQAEFYLQ 704
Query: 625 RASCYHAIGEYREAV 639
+ H + Y++A+
Sbjct: 705 KGKVLHDLKNYKDAL 719
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 5/268 (1%)
Query: 377 KSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +D F ++G A + +Y AI +D+ ++ DP +G A ++
Sbjct: 418 KAIQLDPNDASFYNNKGNALSDLKQYNEAIVCYDKAIQLDPNDEVNYFNKGNALNNLKQY 477
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
AI + +AIQ N + A +G A L + EAI + A++ +PN +G
Sbjct: 478 NEAIVCYDKAIQFNKNYSVAHFSKGYALHNLKQYDEAIVCYNNAIKIDPNYTSAYFNKGT 537
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
FK + A+ S ++LD + S YT+ G ALS + +Y +A + KAIQLD N
Sbjct: 538 TLHNFKQYKEAIVCYSNAIELDPSDASVYTHKGNALSDLKQYNEAIVCYDKAIQLDPNDE 597
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ DL A+ + + +D AY+ +G L+ L Q+K+AI
Sbjct: 598 VAYFKKGNALSDLKQYNIAIVFYDKAIQLDPNDEVAYYKKGSALNDLKQYKEAIFCYDKA 657
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++P+ + + + + +Y E++
Sbjct: 658 IQLNPNCQVAYFNKGNTLQDLQQYNESI 685
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 116/256 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G A + +Y AI +D+ ++ DP +G A + ++ AI + +AIQ
Sbjct: 397 FKKGNALSDLKQYNEAIVCYDKAIQLDPNDASFYNNKGNALSDLKQYNEAIVCYDKAIQL 456
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ + +G A L + EAI KA++F N + +G K ++ A+
Sbjct: 457 DPNDEVNYFNKGNALNNLKQYNEAIVCYDKAIQFNKNYSVAHFSKGYALHNLKQYDEAIV 516
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +K+D SAY G L + +YK+A + AI+LD + + H DL
Sbjct: 517 CYNNAIKIDPNYTSAYFNKGTTLHNFKQYKEAIVCYSNAIELDPSDASVYTHKGNALSDL 576
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+A+ C + + +D AY +G L L Q+ AI + +DP++ Y
Sbjct: 577 KQYNEAIVCYDKAIQLDPNDEVAYFKKGNALSDLKQYNIAIVFYDKAIQLDPNDEVAYYK 636
Query: 625 RASCYHAIGEYREAVI 640
+ S + + +Y+EA+
Sbjct: 637 KGSALNDLKQYKEAIF 652
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
++ AI +++L ++ + AL + A E AI A+Q NP + R+
Sbjct: 272 QFKQAIEQCEKVLIQESQHLHALNRKSVALQNLSEHLDAIQCIDVALQKNPEYSVGYFRK 331
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + G++ +AI KA++ +P+ A + +G K +N A+ +++
Sbjct: 332 GYSLWQQGKNQDAIFIFDKAMQIDPSYASTYNYKGNALNDLKQYNEAIVCYDKAIQIYPN 391
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLEAWGH----LTQFYQDLANSE 568
++ AY G ALS + +Y +A + KAIQLD N F G+ L Q+ + + +
Sbjct: 392 DEVAYFKKGNALSDLKQYNEAIVCYDKAIQLDPNDASFYNNKGNALSDLKQYNEAIVCYD 451
Query: 569 KALE---------------------------CLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KA++ C + + +K +S A+ +G LH L Q+
Sbjct: 452 KAIQLDPNDEVNYFNKGNALNNLKQYNEAIVCYDKAIQFNKNYSVAHFSKGYALHNLKQY 511
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+AI ++ + IDP+ + + + H +Y+EA++
Sbjct: 512 DEAIVCYNNAIKIDPNYTSAYFNKGTTLHNFKQYKEAIV 550
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 9/225 (4%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI ++ +K D Y A +G A ++ AI + EAI+ +PS A+ +G
Sbjct: 749 YNEAIFYYNNAIKLDRNYAMAYNNKGRALHDLKQYNEAIISYDEAIKKDPSLAIAFNNKG 808
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+A L + +++Q A++ + N A + +G + K + A+ +++D
Sbjct: 809 RALHDLQKYNDSLQCYDTAIQIDQNFAIAYNNKGRALYNLKQYTDAIVCYDKAIQIDPNF 868
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY--------QDLANSE 568
AY G AL ++ +YK A + KAIQ+D NF A+ + Q Y +L +
Sbjct: 869 TIAYNNKGKALHNLKQYKDAIACYDKAIQIDPNFTIAYNNKGQKYLIQLGNALSNLNQNN 928
Query: 569 KALECLQQVLYIDKRFSKAYHLRGL-LLHGLGQHKKAIKDLSSGL 612
A++C + + I+ + Y +GL L GQ IK+ + +
Sbjct: 929 DAIDCFNKAININPNDTTNYFQKGLKYLIVQGQFLTNIKNYTQAI 973
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 109/275 (39%), Gaps = 19/275 (6%)
Query: 385 LSRGIAQVNEGKYASA----------------ISIFDQILKEDPM--YPEALIGRGTARA 426
L +GI +N+ K+ A ++ QI+K+ M +A+I R A
Sbjct: 174 LQQGIQLLNQQKWQEANEKITQYIKLSAKQQTLATLFQIIKKIEMNQLGQAIIMRNQAEK 233
Query: 427 FQRELEAAISDFT-EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ D++ E + P+ + A L + +AI+ K L E
Sbjct: 234 INNNFYRDLLDYSNEELMKTPNNMVMLIAQSYALCELKQFKQAIEQCEKVLIQESQHLHA 293
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+ + + + A++ + ++ + E Y G +L G+ + A KA+Q
Sbjct: 294 LNRKSVALQNLSEHLDAIQCIDVALQKNPEYSVGYFRKGYSLWQQGKNQDAIFIFDKAMQ 353
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+D ++ + + DL +A+ C + + I AY +G L L Q+ +AI
Sbjct: 354 IDPSYASTYNYKGNALNDLKQYNEAIVCYDKAIQIYPNDEVAYFKKGNALSDLKQYNEAI 413
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ +DP++ + + + +Y EA++
Sbjct: 414 VCYDKAIQLDPNDASFYNNKGNALSDLKQYNEAIV 448
>gi|166363102|ref|YP_001655375.1| hypothetical protein MAE_03610 [Microcystis aeruginosa NIES-843]
gi|166085475|dbj|BAG00183.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
Length = 1179
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 135/261 (51%), Gaps = 7/261 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N KY A+S + + + +P + EA + RG ++ E A+SD+T+AI N
Sbjct: 725 NRGNLYKNLQKYELALSDYSKAIDINPKFAEAYVNRGNLYKNLQKYELALSDYTKAIDIN 784
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG + L + A+ D SKA++ PN A + RG++ + ++ A+ D
Sbjct: 785 PNYAMAYNNRGNLYSDLQKYDLALSDYSKAIDINPNYAMAYNNRGVLYSDLQKYDLALSD 844
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ AY G+ S + +Y A + KAI ++ N+ EA+ + Y++L
Sbjct: 845 YTKAIDINPNYAEAYVNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQ 904
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E AL + + I+ +++AY RG L L +++ A+ D S + I+P++ + Y R
Sbjct: 905 KYELALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNDAKVYYNR 964
Query: 626 ASCYH-------AIGEYREAV 639
+ Y+ A+ +Y +A+
Sbjct: 965 GNLYYNQQKYDLALSDYSKAI 985
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 141/275 (51%), Gaps = 3/275 (1%)
Query: 368 FCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
++ SK+ I+ ++ ++ RG+ + KY A+S + + + +P Y EA + RG
Sbjct: 806 LALSDYSKAIDINPNYAMAYNNRGVLYSDLQKYDLALSDYTKAIDINPNYAEAYVNRGVL 865
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ ++ + A+SD+++AI NP+ EA+ RG L + A+ D SKA++ PN A+
Sbjct: 866 YSDLQKYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNYAE 925
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG + + + A+ D S + ++ + Y G + +Y A + KAI
Sbjct: 926 AYVNRGNLYKNLQKYELALSDYSKAIDINPNDAKVYYNRGNLYYNQQKYDLALSDYSKAI 985
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+++ N+ +A+ + Y++L E AL + + I+ +F++AY+ RGLL + ++ A
Sbjct: 986 EINPNYAKAYYNRGNLYKNLQKYELALSDYSKAIDINPKFAEAYYNRGLLYYNQQKYDLA 1045
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ D S + I+P++ R + Y + +Y A+
Sbjct: 1046 LSDFSKAIDINPNDAGAYNNRGNLYSDLQKYELAL 1080
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 129/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++ KY A+S +++ ++ +P + +A RG ++ E A+SD+++AI N
Sbjct: 691 NRGNLYIDLQKYELALSDWNKAIELNPNFADAYNNRGNLYKNLQKYELALSDYSKAIDIN 750
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG L + A+ D +KA++ PN A + RG + + ++ A+ D
Sbjct: 751 PKFAEAYVNRGNLYKNLQKYELALSDYTKAIDINPNYAMAYNNRGNLYSDLQKYDLALSD 810
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + ++ AY G+ S + +Y A + KAI ++ N+ EA+ + Y DL
Sbjct: 811 YSKAIDINPNYAMAYNNRGVLYSDLQKYDLALSDYTKAIDINPNYAEAYVNRGVLYSDLQ 870
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ AL + + I+ +++AY RG L L +++ A+ D S + I+P+ E R
Sbjct: 871 KYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNYAEAYVNR 930
Query: 626 ASCYHAIGEYREAV 639
+ Y + +Y A+
Sbjct: 931 GNLYKNLQKYELAL 944
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+ + KY A+S + + + +P Y EA + RG ++ E A+SD+++AI
Sbjct: 860 VNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDI 919
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ EA+ RG L + A+ D SKA++ PN A + + RG + + + ++ A+
Sbjct: 920 NPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNDAKVYYNRGNLYYNQQKYDLALS 979
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S ++++ AY G ++ +Y+ A + KAI ++ F EA+ + Y +
Sbjct: 980 DYSKAIEINPNYAKAYYNRGNLYKNLQKYELALSDYSKAIDINPKFAEAYYNRGLLYYNQ 1039
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ AL + + I+ + AY+ RG L L +++ A+ D S + I+P+ Y
Sbjct: 1040 QKYDLALSDFSKAIDINPNDAGAYNNRGNLYSDLQKYELALSDYSKAIDINPNYANAYYN 1099
Query: 625 RASCYH 630
R Y+
Sbjct: 1100 RGLLYY 1105
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 143/294 (48%), Gaps = 9/294 (3%)
Query: 353 DMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEG-------KYASAISIFD 405
D N K +K+ + SK+I ++ + + A VN G KY A+S +
Sbjct: 721 DAYNNRGNLYKNLQKYELALSDYSKAIDINPKFAE--AYVNRGNLYKNLQKYELALSDYT 778
Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
+ + +P Y A RG + ++ + A+SD+++AI NP+ A+ RG + L +
Sbjct: 779 KAIDINPNYAMAYNNRGNLYSDLQKYDLALSDYSKAIDINPNYAMAYNNRGVLYSDLQKY 838
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
A+ D +KA++ PN A+ RG++ + ++ A+ D S + ++ AY G
Sbjct: 839 DLALSDYTKAIDINPNYAEAYVNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVNRGN 898
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
++ +Y+ A + KAI ++ N+ EA+ + Y++L E AL + + I+ +
Sbjct: 899 LYKNLQKYELALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNDA 958
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
K Y+ RG L + ++ A+ D S + I+P+ + Y R + Y + +Y A+
Sbjct: 959 KVYYNRGNLYYNQQKYDLALSDYSKAIEINPNYAKAYYNRGNLYKNLQKYELAL 1012
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 3/270 (1%)
Query: 368 FCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
++ SK+ I+ ++ ++RG N KY A+S + + + +P Y EA + RG
Sbjct: 874 LALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNYAEAYVNRGNL 933
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
++ E A+SD+++AI NP+ + + RG + A+ D SKA+E PN A
Sbjct: 934 YKNLQKYELALSDYSKAIDINPNDAKVYYNRGNLYYNQQKYDLALSDYSKAIEINPNYAK 993
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ RG + + + A+ D S + ++ + AY GL + +Y A KAI
Sbjct: 994 AYYNRGNLYKNLQKYELALSDYSKAIDINPKFAEAYYNRGLLYYNQQKYDLALSDFSKAI 1053
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++ N A+ + Y DL E AL + + I+ ++ AY+ RGLL + ++ A
Sbjct: 1054 DINPNDAGAYNNRGNLYSDLQKYELALSDYSKAIDINPNYANAYYNRGLLYYNQQKYDLA 1113
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ D S + I+P++ R+ Y +G+
Sbjct: 1114 LSDFSKAIDINPNDAGAYVSRSILYAILGQ 1143
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 124/258 (48%), Gaps = 7/258 (2%)
Query: 380 SVDFRLSRGIAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
++D + +A N G KY A+S + + + +P Y A RG + ++ +
Sbjct: 780 AIDINPNYAMAYNNRGNLYSDLQKYDLALSDYSKAIDINPNYAMAYNNRGVLYSDLQKYD 839
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A+SD+T+AI NP+ EA+ RG + L + A+ D SKA++ PN A+ RG +
Sbjct: 840 LALSDYTKAIDINPNYAEAYVNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVNRGNL 899
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ + A+ D S + ++ AY G ++ +Y+ A + KAI ++ N +
Sbjct: 900 YKNLQKYELALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNDAK 959
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ + Y + + AL + + I+ ++KAY+ RG L L +++ A+ D S +
Sbjct: 960 VYYNRGNLYYNQQKYDLALSDYSKAIEINPNYAKAYYNRGNLYKNLQKYELALSDYSKAI 1019
Query: 613 GIDPSNIECLYLRASCYH 630
I+P E Y R Y+
Sbjct: 1020 DINPKFAEAYYNRGLLYY 1037
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 122/245 (49%), Gaps = 3/245 (1%)
Query: 367 KFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
+ ++ SK+ I+ ++ ++RG N KY A+S + + + +P + RG
Sbjct: 907 ELALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNDAKVYYNRGN 966
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
Q++ + A+SD+++AI+ NP+ +A+ RG L + A+ D SKA++ P A
Sbjct: 967 LYYNQQKYDLALSDYSKAIEINPNYAKAYYNRGNLYKNLQKYELALSDYSKAIDINPKFA 1026
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ + RG++ + + ++ A+ D S + ++ + AY G S + +Y+ A + KA
Sbjct: 1027 EAYYNRGLLYYNQQKYDLALSDFSKAIDINPNDAGAYNNRGNLYSDLQKYELALSDYSKA 1086
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
I ++ N+ A+ + Y + + AL + + I+ + AY R +L LGQ +K
Sbjct: 1087 IDINPNYANAYYNRGLLYYNQQKYDLALSDFSKAIDINPNDAGAYVSRSILYAILGQPEK 1146
Query: 604 AIKDL 608
DL
Sbjct: 1147 VKIDL 1151
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 117/259 (45%), Gaps = 3/259 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF S G + Y A+++ +Q + P P + + + ++ T+A
Sbjct: 620 DFSTSAGREREARENYEQALTVINQAISLLPNNPNYYNEKWAVLDKLKRYDEGLAAITQA 679
Query: 442 IQSNPSAGEAW-KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I P A AW RG L + A+ D +KA+E PN AD + RG + + +
Sbjct: 680 IDLAPRA--AWYSNRGNLYIDLQKYELALSDWNKAIELNPNFADAYNNRGNLYKNLQKYE 737
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D S + ++ + AY G ++ +Y+ A + KAI ++ N+ A+ +
Sbjct: 738 LALSDYSKAIDINPKFAEAYVNRGNLYKNLQKYELALSDYTKAIDINPNYAMAYNNRGNL 797
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
Y DL + AL + + I+ ++ AY+ RG+L L ++ A+ D + + I+P+ E
Sbjct: 798 YSDLQKYDLALSDYSKAIDINPNYAMAYNNRGVLYSDLQKYDLALSDYTKAIDINPNYAE 857
Query: 621 CLYLRASCYHAIGEYREAV 639
R Y + +Y A+
Sbjct: 858 AYVNRGVLYSDLQKYDLAL 876
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 7/248 (2%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPM 413
N K +K+ + SK+I ++ +RG N+ KY A+S + + ++ +P
Sbjct: 931 GNLYKNLQKYELALSDYSKAIDINPNDAKVYYNRGNLYYNQQKYDLALSDYSKAIEINPN 990
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y +A RG ++ E A+SD+++AI NP EA+ RG + A+ D S
Sbjct: 991 YAKAYYNRGNLYKNLQKYELALSDYSKAIDINPKFAEAYYNRGLLYYNQQKYDLALSDFS 1050
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
KA++ PN A + RG + + + A+ D S + ++ +AY GL + +Y
Sbjct: 1051 KAIDINPNDAGAYNNRGNLYSDLQKYELALSDYSKAIDINPNYANAYYNRGLLYYNQQKY 1110
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ--VLYIDKRFSKAYHLR 591
A KAI ++ N A+ + Y L EK LQQ +L++ + AY
Sbjct: 1111 DLALSDFSKAIDINPNDAGAYVSRSILYAILGQPEKVKIDLQQAAILFLQQNNMAAYEKV 1170
Query: 592 GLLLHGLG 599
+L LG
Sbjct: 1171 MQILQQLG 1178
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 25/124 (20%)
Query: 23 IDELVRVDSVMASAITARIELAKLCS------------------LRNWSKAIRILDSLLA 64
+D+L R D +A AIT I+LA + L +W+KAI L+ A
Sbjct: 663 LDKLKRYDEGLA-AITQAIDLAPRAAWYSNRGNLYIDLQKYELALSDWNKAIE-LNPNFA 720
Query: 65 QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
+Y NR Y L+ ++ + D KA+ ++P +AY+ +G + L + E ALS
Sbjct: 721 DAYN-----NRGNLYKNLQKYELALSDYSKAIDINPKFAEAYVNRGNLYKNLQKYELALS 775
Query: 125 VWEK 128
+ K
Sbjct: 776 DYTK 779
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
+L ++SKAI I + A +Y NR YS L+ + + D KA+ ++P +AY
Sbjct: 806 LALSDYSKAIDI-NPNYAMAYN-----NRGVLYSDLQKYDLALSDYTKAIDINPNYAEAY 859
Query: 107 ILKGCAFSALGRKEEALSVWEK 128
+ +G +S L + + ALS + K
Sbjct: 860 VNRGVLYSDLQKYDLALSDYSK 881
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
+L +++KAI I + A++Y NR YS L+ + + D KA+ ++P +AY
Sbjct: 840 LALSDYTKAIDI-NPNYAEAY-----VNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAY 893
Query: 107 ILKGCAFSALGRKEEALSVWEK 128
+ +G + L + E ALS + K
Sbjct: 894 VNRGNLYKNLQKYELALSDYSK 915
>gi|414078029|ref|YP_006997347.1| hypothetical protein ANA_C12830 [Anabaena sp. 90]
gi|413971445|gb|AFW95534.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 442
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ ++G Y A++ FD L+ + A I RG + AI+D+ + I+ NP
Sbjct: 22 QGLDHYHDGNYQQALANFDAALELYANFSMAYINRGNIFHILGNYQKAIADYNQCIKINP 81
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG + AL E AI + +++LE P + RG+V + +D+ A+ D
Sbjct: 82 NFPEAYHNRGNSYYALQEYQSAISNYNRSLEINPKFGAAYYNRGLVYARIQDYYQAIADF 141
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K+ ++ AY GL S++G+Y+ A + + +A+Q++ + +G + L N
Sbjct: 142 NQALKIVPDDIQAYYERGLVHSNLGDYENAIKDYNQALQINPTLVSVYGFRANAHHHLGN 201
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A+ Q L ID + AY+ RG++ + A+ D + + + P R
Sbjct: 202 YENAIIDYNQALQIDPHLATAYYGRGMVREAIQDLIGAVADYTQAIEVSPEFASAYCKRG 261
Query: 627 SCYHAIGEYREAV 639
Y +G + A+
Sbjct: 262 DAYKLLGNIQTAI 274
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 110/214 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y +AI ++Q L+ DP A GRG R ++L A++D+T+AI+ +P A+ +
Sbjct: 200 GNYENAIIDYNQALQIDPHLATAYYGRGMVREAIQDLIGAVADYTQAIEVSPEFASAYCK 259
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG AIQD ++AL+ + +S + RG + KDF A+ D + ++LD
Sbjct: 260 RGDAYKLLGNIQTAIQDYNQALKIDSDSLAAYYHRGSSRYIAKDFTGAISDFTEALRLDS 319
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ Y+ A ++ EY+KA + +AI ++ N E W + + + L AL L
Sbjct: 320 QSAVFYSDRANARYALKEYQKAISDYTQAISINPNLAEDWFNRGRSHFLLGELNTALADL 379
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
Q + + R+ AY +R + LG AI D
Sbjct: 380 NQAIQLQPRYPLAYLVRADIHRHLGNQLDAIADF 413
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
++ ++S I+ F +RG+ Y AI+ F+Q LK P +A RG
Sbjct: 103 AISNYNRSLEINPKFGAAYYNRGLVYARIQDYYQAIADFNQALKIVPDDIQAYYERGLVH 162
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + E AI D+ +A+Q NP+ + R A LG AI D ++AL+ +P+ A
Sbjct: 163 SNLGDYENAIKDYNQALQINPTLVSVYGFRANAHHHLGNYENAIIDYNQALQIDPHLATA 222
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+V +D AV D + +++ E SAY G A +G + A + + +A++
Sbjct: 223 YYGRGMVREAIQDLIGAVADYTQAIEVSPEFASAYCKRGDAYKLLGNIQTAIQDYNQALK 282
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+D + L A+ H + A+ + L +D + + Y R + L +++KAI
Sbjct: 283 IDSDSLAAYYHRGSSRYIAKDFTGAISDFTEALRLDSQSAVFYSDRANARYALKEYQKAI 342
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + + I+P+ E + R + +GE A+
Sbjct: 343 SDYTQAISINPNLAEDWFNRGRSHFLLGELNTAL 376
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 122/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + +Y SAIS +++ L+ +P + A RG A ++ AI+DF +A++
Sbjct: 89 NRGNSYYALQEYQSAISNYNRSLEINPKFGAAYYNRGLVYARIQDYYQAIADFNQALKIV 148
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG + LG+ AI+D ++AL+ P + R + ++ A+ D
Sbjct: 149 PDDIQAYYERGLVHSNLGDYENAIKDYNQALQINPTLVSVYGFRANAHHHLGNYENAIID 208
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +++D +AY G+ +I + A + +AI++ F A+ Y+ L
Sbjct: 209 YNQALQIDPHLATAYYGRGMVREAIQDLIGAVADYTQAIEVSPEFASAYCKRGDAYKLLG 268
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N + A++ Q L ID AY+ RG + AI D + L +D + R
Sbjct: 269 NIQTAIQDYNQALKIDSDSLAAYYHRGSSRYIAKDFTGAISDFTEALRLDSQSAVFYSDR 328
Query: 626 ASCYHAIGEYREAV 639
A+ +A+ EY++A+
Sbjct: 329 ANARYALKEYQKAI 342
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S S F R A+ +Y AIS + Q + +P E RG + EL A++D
Sbjct: 319 SQSAVFYSDRANARYALKEYQKAISDYTQAISINPNLAEDWFNRGRSHFLLGELNTALAD 378
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+AIQ P A+ R LG ++AI D K+ + S + + + I N
Sbjct: 379 LNQAIQLQPRYPLAYLVRADIHRHLGNQLDAIADFRKSADLYSQSGNTRYYQEITNL 435
>gi|124024536|ref|YP_001018843.1| hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT
9303]
gi|123964822|gb|ABM79578.1| Hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT
9303]
Length = 462
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 137/271 (50%), Gaps = 6/271 (2%)
Query: 362 AKRNKKFCVTRISK-SKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
AKR C I+ +KSI + D +RG A+ G Y AI+ +++ ++ +P Y
Sbjct: 122 AKRKSGDCQGAIADYNKSIEINPQYADAYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYA 181
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+A RG A+ ++ + AI DF +AI+ NP A+ RG A+ L + AI D +KA
Sbjct: 182 DAYNNRGRAKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDELKDYQGAISDFNKA 241
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+E P A + RG + KD+ A+ D + ++++ + +AY G+ G+ ++
Sbjct: 242 IEIIPQDAAAYYNRGNAKDELKDYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQE 301
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A KAI+++ A+ + ++ ++++A+ + + I+ ++ AY+ RG+
Sbjct: 302 AIADFNKAIEINPQLAIAYSNRGIVKRESGDTQEAIADFNRAIEINPEYAAAYNNRGIAK 361
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
LG +++AI D + + I+P Y R
Sbjct: 362 KNLGNYQEAIADYNKAIEINPQYAAAYYNRG 392
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 124/231 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G Y AI+ +++ ++ +P Y +A RG A+ + + AI+D+ ++I+ N
Sbjct: 84 NRGLAKRKSGDYQGAIADYNKAIEINPQYADAYYNRGNAKRKSGDCQGAIADYNKSIEIN 143
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG A+ G+ AI D +K++E P AD + RG +K KD A++D
Sbjct: 144 PQYADAYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDD 203
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ + AY+ G A + +Y+ A KAI++ A+ + +L
Sbjct: 204 FNKAIEINPQLAIAYSNRGNAKDELKDYQGAISDFNKAIEIIPQDAAAYYNRGNAKDELK 263
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ + A+ + + I+ +++ AY+ RG++ G ++AI D + + I+P
Sbjct: 264 DYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQEAIADFNKAIEINP 314
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 132/259 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A+ G AI+ +++ ++ +P Y +A RG A+ + + AI+D+ +
Sbjct: 113 ADAYYNRGNAKRKSGDCQGAIADYNKSIEINPQYADAYYNRGNAKRKSGDYQGAIADYNK 172
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
+I+ NP +A+ RG+A+ L ++ AI D +KA+E P A RG + KD+
Sbjct: 173 SIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDELKDYQ 232
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D + +++ ++ +AY G A + +Y+ A KAI+++ + A+ +
Sbjct: 233 GAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGAISDFNKAIEINPQYAAAYYNRGIV 292
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
++ ++++A+ + + I+ + + AY RG++ G ++AI D + + I+P
Sbjct: 293 KRESGDTQEAIADFNKAIEINPQLAIAYSNRGIVKRESGDTQEAIADFNRAIEINPEYAA 352
Query: 621 CLYLRASCYHAIGEYREAV 639
R +G Y+EA+
Sbjct: 353 AYNNRGIAKKNLGNYQEAI 371
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 146/291 (50%), Gaps = 16/291 (5%)
Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS- 386
Y+KS + + +D+ +R + +K LK+T + +K+ I+ ++
Sbjct: 170 YNKSIEVNPQYADAYNNRGRAKYK---LKDTQG--------AIDDFNKAIEINPQLAIAY 218
Query: 387 --RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG A+ Y AIS F++ ++ P A RG A+ ++ + AISDF +AI+
Sbjct: 219 SNRGNAKDELKDYQGAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGAISDFNKAIEI 278
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG + G++ EAI D +KA+E P A RGIV + D A+
Sbjct: 279 NPQYAAAYYNRGIVKRESGDTQEAIADFNKAIEINPQLAIAYSNRGIVKRESGDTQEAIA 338
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++++ E +AY G+A ++G Y++A + KAI+++ + A+ + L
Sbjct: 339 DFNRAIEINPEYAAAYNNRGIAKKNLGNYQEAIADYNKAIEINPQYAAAYYNRGIAKYKL 398
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL--SSGLG 613
+++ A+ L + + I+ +++ AY RG++ +G K A D +S LG
Sbjct: 399 KDTQGAIAELNKAIEINPQYAAAYKTRGIVKELVGDLKGACADWKEASSLG 449
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 122/255 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA+ + Y AI + + + +P Y A RG A+ + + AI+D+ +AI+
Sbjct: 49 YNRGIAKYDLKDYQGAIVDWAKAIDINPQYVAAYNNRGLAKRKSGDYQGAIADYNKAIEI 108
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP +A+ RG A+ G+ AI D +K++E P AD + RG K D+ A+
Sbjct: 109 NPQYADAYYNRGNAKRKSGDCQGAIADYNKSIEINPQYADAYYNRGNAKRKSGDYQGAIA 168
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++++ + AY G A + + + A + KAI+++ A+ + +L
Sbjct: 169 DYNKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDEL 228
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ + A+ + + I + + AY+ RG L ++ AI D + + I+P Y
Sbjct: 229 KDYQGAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGAISDFNKAIEINPQYAAAYYN 288
Query: 625 RASCYHAIGEYREAV 639
R G+ +EA+
Sbjct: 289 RGIVKRESGDTQEAI 303
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 132/268 (49%), Gaps = 5/268 (1%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+KSI V+ + + RG A+ AI F++ ++ +P A RG A+ ++
Sbjct: 171 NKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDELKD 230
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AISDF +AI+ P A+ RG A+ L + AI D +KA+E P A + RG
Sbjct: 231 YQGAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGAISDFNKAIEINPQYAAAYYNRG 290
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
IV + D A+ D + ++++ + AY+ G+ G+ ++A +AI+++ +
Sbjct: 291 IVKRESGDTQEAIADFNKAIEINPQLAIAYSNRGIVKRESGDTQEAIADFNRAIEINPEY 350
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + ++L N ++A+ + + I+ +++ AY+ RG+ + L + AI +L+
Sbjct: 351 AAAYNNRGIAKKNLGNYQEAIADYNKAIEINPQYAAAYYNRGIAKYKLKDTQGAIAELNK 410
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREA 638
+ I+P R +G+ + A
Sbjct: 411 AIEINPQYAAAYKTRGIVKELVGDLKGA 438
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 118/241 (48%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+ I+ ++++ +P A RG A+ ++ + AI D+ +AI NP A+ RG A
Sbjct: 29 TTIAELTKLIETNPQVAAAYYNRGIAKYDLKDYQGAIVDWAKAIDINPQYVAAYNNRGLA 88
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+ G+ AI D +KA+E P AD + RG K D A+ D + ++++ +
Sbjct: 89 KRKSGDYQGAIADYNKAIEINPQYADAYYNRGNAKRKSGDCQGAIADYNKSIEINPQYAD 148
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
AY G A G+Y+ A + K+I+++ + +A+ + + L +++ A++ + +
Sbjct: 149 AYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFNKAI 208
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
I+ + + AY RG L ++ AI D + + I P + Y R + + +Y+ A
Sbjct: 209 EINPQLAIAYSNRGNAKDELKDYQGAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGA 268
Query: 639 V 639
+
Sbjct: 269 I 269
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 93/186 (50%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
++ I++ T+ I++NP A+ RG A+ L + AI D +KA++ P + RG
Sbjct: 27 VQTTIAELTKLIETNPQVAAAYYNRGIAKYDLKDYQGAIVDWAKAIDINPQYVAAYNNRG 86
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K D+ A+ D + ++++ + AY G A G+ + A + K+I+++ +
Sbjct: 87 LAKRKSGDYQGAIADYNKAIEINPQYADAYYNRGNAKRKSGDCQGAIADYNKSIEINPQY 146
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+A+ + + + + A+ + + ++ +++ AY+ RG + L + AI D +
Sbjct: 147 ADAYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFNK 206
Query: 611 GLGIDP 616
+ I+P
Sbjct: 207 AIEINP 212
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAIT----ARIELAKL-CSLRNWSKAIRILDSLL 63
++Y+L T I + ++ + ++ +A A + A+ EL ++ +++KAI I+
Sbjct: 190 AKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDELKDYQGAISDFNKAIEIIPQDA 249
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
A Y NR +L+ ++ I D +KA++++P AY +G G +EA+
Sbjct: 250 AAYY------NRGNAKDELKDYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQEAI 303
Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVT 160
AD + +E+ L A +R +
Sbjct: 304 --------------ADFNKAIEINPQLAIAYSNRGIV 326
>gi|384208243|ref|YP_005593963.1| hypothetical protein Bint_0754 [Brachyspira intermedia PWS/A]
gi|343385893|gb|AEM21383.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 420
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 7/239 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR---AFQRELEAAISDFTEAI 442
+RG+ + + G AI FD+ L DP +A +G F +E AI DF++AI
Sbjct: 171 NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKE---AIKDFSKAI 227
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP+ A+ RG A+ LG EAI+D KA++ PN A + RG + A
Sbjct: 228 KLNPNYALAYNNRGIAKDNLGLYEEAIKDYDKAIKLNPNYALAYNSRGNAKDNLGLYEEA 287
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ED + +KL +N AY G ++ Y++A + + KAI+LD N+ A+ +
Sbjct: 288 IEDFNKAIKLKPDNTDAYNNRGNTKYNLELYEEAIKDYDKAIKLDPNYAFAYNNRGNAKD 347
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+L E+A+E + + + ++ AY+ RGL LG +++A+KD L +DPS+ EC
Sbjct: 348 NLGLYEEAIEDFDKAIKLKPDYADAYNNRGLTKENLGLYEEALKDYKKALKLDPSS-EC 405
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 130/254 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GI + G+YA AI +D+ +K +P +A + A+ L+ AI ++ +AI+
Sbjct: 103 SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELR 162
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG ++ LG EAI+D KAL +PN D + +G++ + A++D
Sbjct: 163 ADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKD 222
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S +KL+ AY G+A ++G Y++A + + KAI+L+ N+ A+ +L
Sbjct: 223 FSKAIKLNPNYALAYNNRGIAKDNLGLYEEAIKDYDKAIKLNPNYALAYNSRGNAKDNLG 282
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+E + + + + AY+ RG + L +++AIKD + +DP+ R
Sbjct: 283 LYEEAIEDFNKAIKLKPDNTDAYNNRGNTKYNLELYEEAIKDYDKAIKLDPNYAFAYNNR 342
Query: 626 ASCYHAIGEYREAV 639
+ +G Y EA+
Sbjct: 343 GNAKDNLGLYEEAI 356
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 126/259 (48%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++ IA+ G AI +D+ ++ Y A RG ++ LE AI DF +
Sbjct: 132 ADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDK 191
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ +P+ +A+ +G LG S EAI+D SKA++ PN A + RGI +
Sbjct: 192 ALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFSKAIKLNPNYALAYNNRGIAKDNLGLYE 251
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++D +KL+ AY G A ++G Y++A E KAI+L + +A+ +
Sbjct: 252 EAIKDYDKAIKLNPNYALAYNSRGNAKDNLGLYEEAIEDFNKAIKLKPDNTDAYNNRGNT 311
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+L E+A++ + + +D ++ AY+ RG LG +++AI+D + + P +
Sbjct: 312 KYNLELYEEAIKDYDKAIKLDPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYAD 371
Query: 621 CLYLRASCYHAIGEYREAV 639
R +G Y EA+
Sbjct: 372 AYNNRGLTKENLGLYEEAL 390
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 19 TICEIDELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDIC 73
I DE ++++ MA A A+ +L L ++ + KAI + Y
Sbjct: 117 AIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYY------ 170
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L L + I+D DKAL +DP L AY KG LG +EA+ + K
Sbjct: 171 NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFSKA 226
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++SKAI+ L+ A +Y NR L L++ I+D DKA++L+P AY
Sbjct: 219 AIKDFSKAIK-LNPNYALAYN-----NRGIAKDNLGLYEEAIKDYDKAIKLNPNYALAYN 272
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ + K
Sbjct: 273 SRGNAKDNLGLYEEAIEDFNKA 294
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR LEL++ I+D DKA++LDP AY +G A LG EEA+ ++K
Sbjct: 307 NRGNTKYNLELYEEAIKDYDKAIKLDPNYAFAYNNRGNAKDNLGLYEEAIEDFDKA 362
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ KA+ I D L +Y N+ +L K I+D KA++L+P AY
Sbjct: 185 AIKDFDKALSI-DPNLFDAYN-----NKGLLEDELGFSKEAIKDFSKAIKLNPNYALAYN 238
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ ++K
Sbjct: 239 NRGIAKDNLGLYEEAIKDYDKA 260
>gi|405978666|gb|EKC43036.1| Tetratricopeptide repeat protein 13 [Crassostrea gigas]
Length = 1032
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 142/273 (52%), Gaps = 11/273 (4%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA--RAFQRELE 432
++K+ +D +L+ G +N G A+ IF+ IL P A GRG R +E+
Sbjct: 682 QTKNNDIDSKLALGFVSINVGNLDDAMQIFNNILVYHPDSVGAYYGRGIVYQRMGIQEIA 741
Query: 433 AA---ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
A + +FTEAI + + E ++RR ++ AL +A++DL+ A + +S + R
Sbjct: 742 NAAKSVREFTEAIMKDENHHEIYERRAESYIALQHFNDALKDLNIAAK-SSSSKRLFFIR 800
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENK---SAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
GIV+ ++F A ED LD +N +Y +LGLAL G+ + A E ++L
Sbjct: 801 GIVHLLLENFVEAEEDFRR--NLDTDNSLYVGSYFHLGLALYYQGKVRNAIEVFKDVLKL 858
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +EA L Q ++++ N + A + Q ++++ ++ + L G +L+ G+H+ A
Sbjct: 859 KPDHVEASTSLGQAFREIGNLKPAWKRFNQSVHMNPNHAQTWQLWGSMLYTQGEHRGARL 918
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I+PSNI C Y+++ Y +G+Y + +
Sbjct: 919 HFDKCLDINPSNINCQYMKSLTYITMGKYYQGL 951
>gi|440289940|gb|ELP83394.1| tetratricopeptide repeat protein, putative [Entamoeba invadens IP1]
Length = 898
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 117/229 (51%), Gaps = 1/229 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +L+ G VN GK AI Q L + P I RGTA A A++DF
Sbjct: 185 IDQQLAMGYFLVNNGKLQDAIKYLTQFLVKYPKVAGGYIARGTALAMGGAFNEAVADFGS 244
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
AI +P +A KRRGQ +G+ EA+ D+ A++ + D+ +RGIV+ +++
Sbjct: 245 AITLDPDNFDAHKRRGQTLIGIGKLPEALADMDAAVKLSKGKDPDVYKQRGIVHQMMRNY 304
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A +D VK + ++ + GL +++G +++A E +A+ ++ F+E + +L Q
Sbjct: 305 EKARDDFEVVVKKMPGDAVSWNHFGLNNTALGLFREAAEGFGRAVSINPEFVECYVNLAQ 364
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+D ++A + + + A++LRG++L +G H +A K+
Sbjct: 365 LEKDAGQPKRAEGVFKIIFNKVPKHPFAHYLRGVMLQQIGNHIEATKEF 413
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 68/193 (35%), Gaps = 35/193 (18%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+L+ AI T+ + P + RG A A G EA+ D A+ +P++ D R
Sbjct: 200 KLQDAIKYLTQFLVKYPKVAGGYIARGTALAMGGAFNEAVADFGSAITLDPDNFDAHKRR 259
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDK-ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G A+ D+ A VKL K ++ Y G+ + Y+KA + ++
Sbjct: 260 GQTLIGIGKLPEALADMDAAVKLSKGKDPDVYKQRGIVHQMMRNYEKARDDFEVVVKKMP 319
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+W H GL LG ++A +
Sbjct: 320 GDAVSWNHF----------------------------------GLNNTALGLFREAAEGF 345
Query: 609 SSGLGIDPSNIEC 621
+ I+P +EC
Sbjct: 346 GRAVSINPEFVEC 358
>gi|159906168|ref|YP_001549830.1| hypothetical protein MmarC6_1787 [Methanococcus maripaludis C6]
gi|159887661|gb|ABX02598.1| TPR repeat-containing protein [Methanococcus maripaludis C6]
Length = 543
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 131/252 (51%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R + S +D ++G+A + G+Y AI +D+ L+ D Y ++ +G A +
Sbjct: 259 CYNRAIELDSNDIDSWNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQYNKGLALQYL 318
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ AI + + ++ NP ++W +G + +G EAI+ K+LE P DIL+
Sbjct: 319 ERYDEAIVCYDKTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELNPEDVDILYN 378
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G + + AV+ + + ++ A+ GLAL +G+Y++A + +AI+L
Sbjct: 379 KGNSLYDLGRYEEAVQFYNNALNINSSCSDAWHNKGLALHDLGKYEEAIGCYNRAIELGP 438
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N ++W + DL E+A+EC + L ++ +S ++ +GL L LG++++AI+
Sbjct: 439 NNSDSWNNKGNSLYDLGRYEEAIECYDKSLELNPNYSDTWYNKGLSLCKLGRYEEAIEYY 498
Query: 609 SSGLGIDPSNIE 620
L ++PS+ E
Sbjct: 499 GRALELNPSDEE 510
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 128/275 (46%), Gaps = 8/275 (2%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C ++ + + D L +G + Y I D+ L+ DP +A G + F
Sbjct: 89 CFDKVLELDPEAFDAWLYKGYTYYDLDNYQKTIECLDKALELDPENLDAYYCEGDSYYFL 148
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E ++ + A++ NP+ +G + LG EAI KAL+ +PN A L
Sbjct: 149 ERYEESLECYNRALELNPTYTSLLVDKGTSLHKLGRYEEAIICYDKALKIDPNYAYALSN 208
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL----GLALSSIGEYKKAEEAHLKAI 544
+G+ + + ++E C ++ S Y+Y+ GLAL +G Y++A + +AI
Sbjct: 209 KGLSLYDLGRYEESIE----CYDKALKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRAI 264
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+LD N +++W + DL E+A+ C + L +D +S + + +GL L L ++ +A
Sbjct: 265 ELDSNDIDSWNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQYNKGLALQYLERYDEA 324
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I L ++P + + + H +G Y EA+
Sbjct: 325 IVCYDKTLELNPEDTDSWCNKGISLHEVGRYEEAI 359
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 138/272 (50%), Gaps = 5/272 (1%)
Query: 373 ISKSKSISVD----FRLS-RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
I K++ +D + LS +G++ + G+Y +I +D+ LK + Y +G A
Sbjct: 190 ICYDKALKIDPNYAYALSNKGLSLYDLGRYEESIECYDKALKSNSGYSYVWYNKGLALYD 249
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E AI + AI+ + + ++W +G A LG EAI +ALE + N +D +
Sbjct: 250 MGRYEEAIGCYNRAIELDSNDIDSWNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQY 309
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G+ + ++ A+ ++L+ E+ ++ G++L +G Y++A E + K+++L+
Sbjct: 310 NKGLALQYLERYDEAIVCYDKTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELN 369
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++ + DL E+A++ L I+ S A+H +GL LH LG++++AI
Sbjct: 370 PEDVDILYNKGNSLYDLGRYEEAVQFYNNALNINSSCSDAWHNKGLALHDLGKYEEAIGC 429
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + + P+N + + + + +G Y EA+
Sbjct: 430 YNRAIELGPNNSDSWNNKGNSLYDLGRYEEAI 461
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 129/244 (52%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y ++ +++ L+ +P Y L+ +GT+ E AI + +A++ +P+ A +
Sbjct: 150 RYEESLECYNRALELNPTYTSLLVDKGTSLHKLGRYEEAIICYDKALKIDPNYAYALSNK 209
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + LG E+I+ KAL+ + + + +G+ + + A+ + ++LD
Sbjct: 210 GLSLYDLGRYEESIECYDKALKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRAIELDSN 269
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ ++ GLAL +G Y++A + +A++LD N+ ++ + Q L ++A+ C
Sbjct: 270 DIDSWNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQYNKGLALQYLERYDEAIVCYD 329
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ L ++ + ++ +G+ LH +G++++AI+ L ++P +++ LY + + + +G Y
Sbjct: 330 KTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELNPEDVDILYNKGNSLYDLGRY 389
Query: 636 REAV 639
EAV
Sbjct: 390 EEAV 393
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 123/257 (47%), Gaps = 2/257 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQ 443
G+ + Y +I F+ L+ DP A +G R EA + F + ++
Sbjct: 37 FDEGLNYYDNENYEKSIECFNNALELDPYDKTAWFNKGYILYGIYRSNEALVC-FDKVLE 95
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+P A +AW +G L + I+ L KALE +P + D + G + + + ++
Sbjct: 96 LDPEAFDAWLYKGYTYYDLDNYQKTIECLDKALELDPENLDAYYCEGDSYYFLERYEESL 155
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
E + ++L+ S G +L +G Y++A + KA+++D N+ A + D
Sbjct: 156 ECYNRALELNPTYTSLLVDKGTSLHKLGRYEEAIICYDKALKIDPNYAYALSNKGLSLYD 215
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L E+++EC + L + +S ++ +GL L+ +G++++AI + + +D ++I+
Sbjct: 216 LGRYEESIECYDKALKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRAIELDSNDIDSWN 275
Query: 624 LRASCYHAIGEYREAVI 640
+ + +G Y EA++
Sbjct: 276 NKGLALYDLGRYEEAIV 292
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 119/253 (47%), Gaps = 5/253 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + NE A+ FD++L+ DP +A + +G + I +A++ +P
Sbjct: 79 GIYRSNE-----ALVCFDKVLELDPEAFDAWLYKGYTYYDLDNYQKTIECLDKALELDPE 133
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G + L E+++ ++ALE P +L ++G K + A+
Sbjct: 134 NLDAYYCEGDSYYFLERYEESLECYNRALELNPTYTSLLVDKGTSLHKLGRYEEAIICYD 193
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+K+D A + GL+L +G Y+++ E + KA++ + + W + D+
Sbjct: 194 KALKIDPNYAYALSNKGLSLYDLGRYEESIECYDKALKSNSGYSYVWYNKGLALYDMGRY 253
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E+A+ C + + +D +++ +GL L+ LG++++AI L +D + + Y +
Sbjct: 254 EEAIGCYNRAIELDSNDIDSWNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQYNKGL 313
Query: 628 CYHAIGEYREAVI 640
+ Y EA++
Sbjct: 314 ALQYLERYDEAIV 326
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 87/176 (49%)
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S+ I + A + +++ + G+ + +++ ++E + ++LD +K+A+ G
Sbjct: 15 SIFFIMNTCYANTIDGKTSEDWFDEGLNYYDNENYEKSIECFNNALELDPYDKTAWFNKG 74
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L I +A K ++LD +AW + Y DL N +K +ECL + L +D
Sbjct: 75 YILYGIYRSNEALVCFDKVLELDPEAFDAWLYKGYTYYDLDNYQKTIECLDKALELDPEN 134
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
AY+ G + L +++++++ + L ++P+ L + + H +G Y EA+I
Sbjct: 135 LDAYYCEGDSYYFLERYEESLECYNRALELNPTYTSLLVDKGTSLHKLGRYEEAII 190
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
+ + Y L+ ++ I DKAL+LDP L AY +G ++ L R EE+L + + E
Sbjct: 107 KGYTYYDLDNYQKTIECLDKALELDPENLDAYYCEGDSYYFLERYEESLECYNRALE 163
>gi|392411460|ref|YP_006448067.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390624596|gb|AFM25803.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 407
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 130/252 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + G A++ + LK A RG + + ++AI D +A++ +P+
Sbjct: 36 GLDAEDAGNLDDALARLTEALKLQGQSAHAWAKRGEVNLRKGDPQSAIKDLLQAVKLDPA 95
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ R G A AL + AI+ L++A++ +P S++ L+ RG D+++AV D
Sbjct: 96 YAAAYTRLGFAYNALNDYEHAIEALNQAVQLDPTSSEALNTRGFAFNGKHDYDSAVRDFD 155
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
A ++L+ + Y G AL+ EY +A E +AI LD + + Y +
Sbjct: 156 AAIRLNSNDARYYNNRGFALNGKHEYARAVEDFDRAISLDSTKAMYFNNRGVAYLRQKDF 215
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
++ALE ++ L +D +FS AYH RG+ L G G+H KA++++S + ++P + R +
Sbjct: 216 DRALEDFERTLKLDSKFSSAYHNRGMALSGKGRHDKAVEEISKVIEMNPDSPLLYKDRGT 275
Query: 628 CYHAIGEYREAV 639
Y +GE+ AV
Sbjct: 276 AYRKMGEFELAV 287
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI +Q ++ DP EAL RG A + + ++A+ DF AI+ N + + RG
Sbjct: 113 YEHAIEALNQAVQLDPTSSEALNTRGFAFNGKHDYDSAVRDFDAAIRLNSNDARYYNNRG 172
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A E A++D +A+ + A + RG+ + KDF+ A+ED +KLD +
Sbjct: 173 FALNGKHEYARAVEDFDRAISLDSTKAMYFNNRGVAYLRQKDFDRALEDFERTLKLDSKF 232
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
SAY G+ALS G + KA E K I+++ + + Y+ + E A++ L++
Sbjct: 233 SSAYHNRGMALSGKGRHDKAVEEISKVIEMNPDSPLLYKDRGTAYRKMGEFELAVKDLEK 292
Query: 577 VLYIDKRFSKAY 588
+ +DK+F+ Y
Sbjct: 293 AIDLDKKFAPGY 304
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 154/359 (42%), Gaps = 45/359 (12%)
Query: 290 KASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLS 349
+ VN R G + D+ + D A + +Y++ + N +D + L+
Sbjct: 69 RGEVNLRKGDPQSAIKDLLQAVKLDPAY-------AAAYTRLGFAYNALNDYEHAIEALN 121
Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF----RLS---------RGIAQVNEGK 396
+ L TS+EA + F S DF RL+ RG A + +
Sbjct: 122 -QAVQLDPTSSEALNTRGFAFNGKHDYDSAVRDFDAAIRLNSNDARYYNNRGFALNGKHE 180
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
YA A+ FD+ + D RG A Q++ + A+ DF ++ + A+ RG
Sbjct: 181 YARAVEDFDRAISLDSTKAMYFNNRGVAYLRQKDFDRALEDFERTLKLDSKFSSAYHNRG 240
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A + G +A++++SK +E P+S + +RG K +F AV+DL + LDK+
Sbjct: 241 MALSGKGRHDKAVEEISKVIEMNPDSPLLYKDRGTAYRKMGEFELAVKDLEKAIDLDKKF 300
Query: 517 KSAYTYLG--LALSSIGEYKKAEEA---HLKAIQLDR----NFLEAWGHLTQFYQDLANS 567
Y L A S+ +YK + A KA+ L + + LE + QF AN+
Sbjct: 301 APGYAALAQVYAFSTDPKYKNSTMALKLAEKALALGKGDSPDILENLAEI-QF----ANN 355
Query: 568 EKAL--ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID-PSNIECLY 623
+KAL LQ+ L +D +K Y L L + + A D ++G + PS L+
Sbjct: 356 QKALAVRTLQKALTMDPT-NKEY------LELLAKWQGAPSDTATGTPVSGPSPFSNLW 407
>gi|300870120|ref|YP_003784991.1| hypothetical protein BP951000_0487 [Brachyspira pilosicoli 95/1000]
gi|300687819|gb|ADK30490.1| tetratricopeptide repeat family protein [Brachyspira pilosicoli
95/1000]
Length = 420
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 122/239 (51%), Gaps = 7/239 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR---AFQRELEAAISDFTEAI 442
+RG+ + + G AI FD+ L DP +A +G F +E AI DF +AI
Sbjct: 171 NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKE---AIKDFNKAI 227
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP+ A+ RG A+ LG EAI+D +KA++ PN A + RG + A
Sbjct: 228 KLNPNYALAYNNRGTAKDNLGLYEEAIKDYNKAIKLNPNYALAYNNRGNAKDNLGLYEEA 287
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ED +KL +N AY G A ++ Y++A + + K I+L+ N+ A+ +
Sbjct: 288 IEDFDKAIKLKPDNTDAYNNRGNAKYNLELYEEAIKDYDKTIKLNPNYAFAYNNRGNAKD 347
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+L E+A+E + + ++ + AY+ RG LG +++A KD L +DPSN EC
Sbjct: 348 NLGLYEEAIEDFDKAIKLNPDYVDAYNNRGFTKENLGLYEEAFKDYKKALELDPSN-EC 405
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 159/320 (49%), Gaps = 3/320 (0%)
Query: 321 SNTNSESYSKSSISDNKSSDSTESRSK-LSFKWDMLKETSNEAKRNKKFCVTRISKSKSI 379
+N ++E+YS + ++ E +K +S K + +N NK+ + R++
Sbjct: 39 NNIDAENYSDFDDFNERAKAFNEELNKIMSDKKHFIVSFTNIVDNNKEVDIDRLNNLTDY 98
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D+ S+GI + G+YA AI +D+ +K +P +A + A+ L+ AI ++
Sbjct: 99 H-DYN-SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYD 156
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ A+ RG ++ LG EAI+D KAL +PN D + +G++ +
Sbjct: 157 KAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFS 216
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++D + +KL+ AY G A ++G Y++A + + KAI+L+ N+ A+ +
Sbjct: 217 KEAIKDFNKAIKLNPNYALAYNNRGTAKDNLGLYEEAIKDYNKAIKLNPNYALAYNNRGN 276
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+L E+A+E + + + + AY+ RG + L +++AIKD + ++P+
Sbjct: 277 AKDNLGLYEEAIEDFDKAIKLKPDNTDAYNNRGNAKYNLELYEEAIKDYDKTIKLNPNYA 336
Query: 620 ECLYLRASCYHAIGEYREAV 639
R + +G Y EA+
Sbjct: 337 FAYNNRGNAKDNLGLYEEAI 356
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 127/259 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++ IA+ G AI +D+ ++ Y A RG ++ LE AI DF +
Sbjct: 132 ADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDK 191
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ +P+ +A+ +G LG S EAI+D +KA++ PN A + RG +
Sbjct: 192 ALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGTAKDNLGLYE 251
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++D + +KL+ AY G A ++G Y++A E KAI+L + +A+ +
Sbjct: 252 EAIKDYNKAIKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDNTDAYNNRGNA 311
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+L E+A++ + + ++ ++ AY+ RG LG +++AI+D + ++P ++
Sbjct: 312 KYNLELYEEAIKDYDKTIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYVD 371
Query: 621 CLYLRASCYHAIGEYREAV 639
R +G Y EA
Sbjct: 372 AYNNRGFTKENLGLYEEAF 390
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ N G Y AI FD+ +K P +A RG A+ E AI D+ + I+ N
Sbjct: 273 NRGNAKDNLGLYEEAIEDFDKAIKLKPDNTDAYNNRGNAKYNLELYEEAIKDYDKTIKLN 332
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A+ LG EAI+D KA++ P+ D + RG + A +D
Sbjct: 333 PNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDAYNNRGFTKENLGLYEEAFKD 392
Query: 506 LSACVKLDKENKSA 519
++LD N+ A
Sbjct: 393 YKKALELDPSNECA 406
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 20 ICEIDELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDICN 74
I DE ++++ MA A A+ +L L ++ + KAI + Y N
Sbjct: 118 IKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYY------N 171
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
R S L L + I+D DKAL +DP L AY KG LG +EA+ + K
Sbjct: 172 RGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKA 226
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI+ L+ A +Y NR L L++ I+D +KA++L+P AY
Sbjct: 219 AIKDFNKAIK-LNPNYALAYN-----NRGTAKDNLGLYEEAIKDYNKAIKLNPNYALAYN 272
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ ++K
Sbjct: 273 NRGNAKDNLGLYEEAIEDFDKA 294
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR LEL++ I+D DK ++L+P AY +G A LG EEA+ ++K
Sbjct: 307 NRGNAKYNLELYEEAIKDYDKTIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKA 362
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ KA+ I D L +Y N+ +L K I+D +KA++L+P AY
Sbjct: 185 AIKDFDKALSI-DPNLFDAYN-----NKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYN 238
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ + K
Sbjct: 239 NRGTAKDNLGLYEEAIKDYNKA 260
>gi|124024538|ref|YP_001018845.1| hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT
9303]
gi|123964824|gb|ABM79580.1| Hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT
9303]
Length = 706
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 159/320 (49%), Gaps = 7/320 (2%)
Query: 327 SYSKSSISDNKSSDSTESRS-KLSFKWDMLKETSNEAKRNKKFCVTRISK-SKSISVDFR 384
+Y+K +++D + + S +++ +++ ++ E AK+ K I+ +K+I ++ +
Sbjct: 323 AYAKDALNDYQGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYNKAIEINPQ 382
Query: 385 LS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ RG+ + N G Y AI+ +++ ++ DP + A RG + + + AI+D+
Sbjct: 383 HTGPFNNRGLVKKNLGDYQGAIADYNKAIELDPQHAYAYYNRGIVKKNLGDYQGAIADYN 442
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI NP E + RG + LG AI D +KA+E P A RGI + KD+
Sbjct: 443 KAIAINPQLAETYSNRGGIKRVLGNYQGAIADFNKAIEINPQYAPAYMNRGIAKYDLKDY 502
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D S + ++ ++ A+ A +G+++ A +AI+++ F +A+ +
Sbjct: 503 QGAIADYSKAITINPQHAIAFNNRSNAKDQLGDHQGAISDLNRAIEINPQFADAFNNRGA 562
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+L + + A+ + + I+ + ++ Y RG + LG ++ AI D + + IDP
Sbjct: 563 TKYELGDHQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADYNKAIEIDPQYA 622
Query: 620 ECLYLRASCYHAIGEYREAV 639
R + G++++A+
Sbjct: 623 SAYNNRGWSKYLQGDFQDAL 642
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 122/253 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + N G Y AI+ +++ + +P E RG + + AI+DF +AI+ N
Sbjct: 423 NRGIVKKNLGDYQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADFNKAIEIN 482
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ L + AI D SKA+ P A + R + D A+ D
Sbjct: 483 PQYAPAYMNRGIAKYDLKDYQGAIADYSKAITINPQHAIAFNNRSNAKDQLGDHQGAISD 542
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ ++++ + A+ G +G+++ A + KAI ++ E + + + L
Sbjct: 543 LNRAIEINPQFADAFNNRGATKYELGDHQGAIADYNKAIAINPQLAETYSNRGGIKRVLG 602
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N + A+ + + ID +++ AY+ RG + G + A+KD + L I P++ L R
Sbjct: 603 NYQGAIADYNKAIEIDPQYASAYNNRGWSKYLQGDFQDALKDANKALAITPNDGATLDTR 662
Query: 626 ASCYHAIGEYREA 638
HA+G+ R A
Sbjct: 663 GLAKHALGQDRSA 675
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 11/247 (4%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I+++ +L+ RG + G Y AI+ F++ ++ +P Y A + RG A+ ++
Sbjct: 442 NKAIAINPQLAETYSNRGGIKRVLGNYQGAIADFNKAIEINPQYAPAYMNRGIAKYDLKD 501
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+++AI NP A+ R A+ LG+ AI DL++A+E P AD + RG
Sbjct: 502 YQGAIADYSKAITINPQHAIAFNNRSNAKDQLGDHQGAISDLNRAIEINPQFADAFNNRG 561
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ D A+ D + + ++ + Y+ G +G Y+ A + KAI++D +
Sbjct: 562 ATKYELGDHQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADYNKAIEIDPQY 621
Query: 551 LEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A+ + +++ Q + + AL+ + L I RGL H LGQ + A KDL
Sbjct: 622 ASAYNNRGWSKYLQ--GDFQDALKDANKALAITPNDGATLDTRGLAKHALGQDRSACKDL 679
Query: 609 --SSGLG 613
+S LG
Sbjct: 680 KRASSLG 686
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G + AI+ +++ + +P E RG + + AI+D+ +AI+ +
Sbjct: 559 NRGATKYELGDHQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADYNKAIEID 618
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG ++ G+ +A++D +KAL PN L RG+ +A +D
Sbjct: 619 PQYASAYNNRGWSKYLQGDFQDALKDANKALAITPNDGATLDTRGLAKHALGQDRSACKD 678
Query: 506 LSACVKLDKENKSAY 520
L L + S Y
Sbjct: 679 LKRASSLGYQGTSQY 693
>gi|158339013|ref|YP_001520190.1| pentapeptide repeat-containing serine/threonine kinase
[Acaryochloris marina MBIC11017]
gi|158309254|gb|ABW30871.1| serine/threonine kinase with pentapeptide repeats [Acaryochloris
marina MBIC11017]
Length = 699
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 130/259 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V L +G + +G Y A+ + +++DP EA G + +L+ AI+ +T
Sbjct: 411 VQGHLQQGDQKFAQGDYQRALREYAAAIQKDPENAEAHFNSGITKRRLNDLKGAIAHYTT 470
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ P++ +A+ RG R+ LG+ + AI D ++A+ P + RG + +
Sbjct: 471 AIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQ 530
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AA+ D S V++D + AY G+ S +G K A + + I+L+ N+ +A+ +
Sbjct: 531 AAIADYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAISDYSQVIRLNSNYAQAYNNRGIA 590
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
Y +L N +KA+ Q + +D ++++AY RG LG + AI D + + ID + +
Sbjct: 591 YVNLGNLKKAIADYTQAIRVDPKYARAYTNRGTAQLALGNKQAAIADYTQAIDIDSTYAK 650
Query: 621 CLYLRASCYHAIGEYREAV 639
R + +G+ +EA+
Sbjct: 651 AYENRGTVKGQLGKKQEAI 669
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
AI+ + ++ P +A RG R+ + AAI+DFTEAI+ NP +A+ RG
Sbjct: 463 GAIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTI 522
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+ +G+ AI D S+A++ + + RGIV + AA+ D S ++L+
Sbjct: 523 YSEVGKKQAAIADYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAISDYSQVIRLNSNYAQ 582
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
AY G+A ++G KKA + +AI++D + A+ + L N + A+ Q +
Sbjct: 583 AYNNRGIAYVNLGNLKKAIADYTQAIRVDPKYARAYTNRGTAQLALGNKQAAIADYTQAI 642
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
ID ++KAY RG + LG+ ++AI+DL
Sbjct: 643 DIDSTYAKAYENRGTVKGQLGKKQEAIQDL 672
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 103/200 (51%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K SVD +RG+ + G +AI+ F + ++ +P + +A RGT + + +AAI+
Sbjct: 475 KPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQAAIA 534
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D+++A+Q + EA+ RG ++ LG + AI D S+ + N A + RGI
Sbjct: 535 DYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAISDYSQVIRLNSNYAQAYNNRGIAYVNL 594
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ A+ D + +++D + AYT G A ++G + A + +AI +D + +A+ +
Sbjct: 595 GNLKKAIADYTQAIRVDPKYARAYTNRGTAQLALGNKQAAIADYTQAIDIDSTYAKAYEN 654
Query: 557 LTQFYQDLANSEKALECLQQ 576
L ++A++ LQ+
Sbjct: 655 RGTVKGQLGKKQEAIQDLQK 674
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ ++S+ IR L+S AQ+Y NR Y L K I D +A+++DP +AY
Sbjct: 565 AAISDYSQVIR-LNSNYAQAYN-----NRGIAYVNLGNLKKAIADYTQAIRVDPKYARAY 618
Query: 107 ILKGCAFSALGRKEEAL----------SVWEKGYEH 132
+G A ALG K+ A+ S + K YE+
Sbjct: 619 TNRGTAQLALGNKQAAIADYTQAIDIDSTYAKAYEN 654
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAIT----ARIELA-KLCSLRNWSKAIRILDSLL 63
++ RLN I +R+ A R EL KL ++ ++++AIR L+
Sbjct: 454 TKRRLNDLKGAIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIR-LNPQH 512
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
Q+Y NR YS++ + I D +A+Q+D +AY +G S LG + A+
Sbjct: 513 VQAYN-----NRGTIYSEVGKKQAAIADYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAI 567
Query: 124 S 124
S
Sbjct: 568 S 568
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLR----NWSKAIRILDSLLAQSY 67
L T I + +++R++S A A R I L +L+ ++++AIR+ D A++Y
Sbjct: 560 LGNTKAAISDYSQVIRLNSNYAQAYNNRGIAYVNLGNLKKAIADYTQAIRV-DPKYARAY 618
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR L + I D +A+ +D T +AY +G LG+K+EA+ +
Sbjct: 619 -----TNRGTAQLALGNKQAAIADYTQAIDIDSTYAKAYENRGTVKGQLGKKQEAIQDLQ 673
Query: 128 K 128
K
Sbjct: 674 K 674
>gi|359460635|ref|ZP_09249198.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 562
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 126/255 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+A Y +A+ ++Q+L+ D PEA + RG A A AAI D+ + I+
Sbjct: 268 LNRGLAFAAAKNYPAALQDYNQVLQRDAKNPEAYLNRGRAHAASGNHLAAIQDYGQVIKF 327
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + A+ RG A + +G++ A+ D SKA++ +P A L+ RG+V + A+
Sbjct: 328 QPKSALAYFNRGVAYSKVGDNATALADYSKAIQLDPKYAAALYNRGLVQLNQGNSQDAIA 387
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D +A +++D + +AY G A G + A +AI + A+ + +
Sbjct: 388 DFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTLAYYNRGIAHSTA 447
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+E A+ QVL +D +F+ AY RG L G A+KD S + +P N
Sbjct: 448 GQNEAAIADYSQVLTLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANPENATAYNN 507
Query: 625 RASCYHAIGEYREAV 639
RA + A+ +Y EA+
Sbjct: 508 RALIHSALRQYEEAL 522
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 127/293 (43%), Gaps = 38/293 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G+ + +G + AI +D+ ++ + Y A + RG A ++AI+D+T+ IQ
Sbjct: 197 LRQGVEKYGQGNFKGAIQDYDKAIQINGNYALAYVNRGYAHTVLGNSQSAIADYTKVIQL 256
Query: 445 NP-------------------------------------SAGEAWKRRGQARAALGESVE 467
NP EA+ RG+A AA G +
Sbjct: 257 NPKNIELTKIYLNRGLAFAAAKNYPAALQDYNQVLQRDAKNPEAYLNRGRAHAASGNHLA 316
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AIQD + ++F+P SA RG+ K D A+ D S ++LD + +A GL
Sbjct: 317 AIQDYGQVIKFQPKSALAYFNRGVAYSKVGDNATALADYSKAIQLDPKYAAALYNRGLVQ 376
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ G + A +IQ+D + A+ + + N+E A+ Q + + + A
Sbjct: 377 LNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTLA 436
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
Y+ RG+ GQ++ AI D S L +DP R + + A G+ R+A +
Sbjct: 437 YYNRGIAHSTAGQNEAAIADYSQVLTLDPKFAAAYTNRGNLHAAQGD-RDAAL 488
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 5/166 (3%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I +D + + RG+ Q+N+G AI+ F ++ D Y A RGTA
Sbjct: 356 SKAIQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHLKAGN 415
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
EAAI+DFT+AI N A+ RG A + G++ AI D S+ L +P A RG
Sbjct: 416 TEAAIADFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIADYSQVLTLDPKFAAAYTNRG 475
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
++ D +AA++D S ++ + EN +AY L S++ +Y++A
Sbjct: 476 NLHAAQGDRDAALKDYSQAIEANPENATAYNNRALIHSALRQYEEA 521
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 4/198 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A G A+A++ + + ++ DP Y AL RG + Q + AI+DFT +IQ
Sbjct: 336 FNRGVAYSKVGDNATALADYSKAIQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQM 395
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL--HERGIVNFKFKDFNAA 502
+ A+K RG A G + AI D ++A+ F N+ D L + RGI + AA
Sbjct: 396 DTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITF--NAEDTLAYYNRGIAHSTAGQNEAA 453
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D S + LD + +AYT G ++ G+ A + + +AI+ + A+ + +
Sbjct: 454 IADYSQVLTLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANPENATAYNNRALIHS 513
Query: 563 DLANSEKALECLQQVLYI 580
L E+AL QQ I
Sbjct: 514 ALRQYEEALSDYQQAAKI 531
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 378 SISVDFRLS-----RGIAQVNEGKYASAISIFDQILK---EDPMYPEALIGRGTARAFQR 429
SI +D + + RG A + G +AI+ F Q + ED + A RG A +
Sbjct: 392 SIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTL---AYYNRGIAHSTAG 448
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ EAAI+D+++ + +P A+ RG AA G+ A++D S+A+E P +A + R
Sbjct: 449 QNEAAIADYSQVLTLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANPENATAYNNR 508
Query: 490 GIVNFKFKDFNAAVEDLSACVKL 512
+++ + + A+ D K+
Sbjct: 509 ALIHSALRQYEEALSDYQQAAKI 531
>gi|328872976|gb|EGG21343.1| Phosphatidylethanolamine N-methyltransferase [Dictyostelium
fasciculatum]
Length = 1335
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 111/191 (58%), Gaps = 1/191 (0%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNS-ADILHERGIVNFKFKDFNAAVEDLSA 508
+A+KRRGQ+ A G + A+ D ++A+ + +D+ + R ++ ++ +++ A++D
Sbjct: 3 DAYKRRGQSLVAKGLDMAAMGDFTQAVALDKEGDSDLFYNRALLFYEMRNYERALKDFRR 62
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
V+LD +NK A+ +GL L+ G ++A A KAI+LD NF A+ ++ Q ++DL +
Sbjct: 63 SVELDADNKLAWNRIGLCLNVQGYPRQAFSAFKKAIELDPNFEAAYTNIGQCWKDLGIYQ 122
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
+L L I +S A HLRGLL G H AIKD + + +P NI+ LRA
Sbjct: 123 DSLASFNNALDISPSYSNALHLRGLLFFNSGYHLNAIKDWTEFIQNEPINIDVRQLRAIT 182
Query: 629 YHAIGEYREAV 639
+IG++++A+
Sbjct: 183 CTSIGKFKDAL 193
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 52/103 (50%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A S F +AI+ +P+ A+ GQ LG +++ + AL+ P+ ++ LH RG++
Sbjct: 90 AFSAFKKAIELDPNFEAAYTNIGQCWKDLGIYQDSLASFNNALDISPSYSNALHLRGLLF 149
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
F A++D + ++ + N + +SIG++K A
Sbjct: 150 FNSGYHLNAIKDWTEFIQNEPINIDVRQLRAITCTSIGKFKDA 192
>gi|254411497|ref|ZP_05025274.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196181998|gb|EDX76985.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 703
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 126/245 (51%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+S +++ ++ P Y EA +G+G A + EAA+ + +AIQ EAWK R
Sbjct: 347 RYEDALSAYNRAVELQPDYAEAWLGQGDALLALGQSEAALDAYDQAIQIQREYPEAWKGR 406
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+A AAL AI + + +P + RG+V K + ++AA+ +++
Sbjct: 407 GEALAALQRYEAAISAFDQVTKLQPEDVETWERRGMVQMKLQRYSAAIASYDKALEIQPN 466
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
SA+ G AL ++ +Y++A +++ KA++ + E W + +L A++ Q
Sbjct: 467 YSSAWYRRGWALHNLQQYEEAIKSYDKAVEHKPDSAEYWYQRGNAFVNLNKHRDAVDSYQ 526
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + F +A++ +G +L+ L Q+++A+ + + P++ E Y RA H + Y
Sbjct: 527 KAVQFQPDFYRAWYSQGSILNNLNQYQEALAAFEQAVKLQPNSYEAWYGRAWALHQLQRY 586
Query: 636 REAVI 640
EA++
Sbjct: 587 DEALM 591
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 125/255 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G A + G+ +A+ +DQ ++ YPEA GRG A A + EAAIS F + +
Sbjct: 370 LGQGDALLALGQSEAALDAYDQAIQIQREYPEAWKGRGEALAALQRYEAAISAFDQVTKL 429
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P E W+RRG + L AI KALE +PN + + RG + + A++
Sbjct: 430 QPEDVETWERRGMVQMKLQRYSAAIASYDKALEIQPNYSSAWYRRGWALHNLQQYEEAIK 489
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
V+ ++ + G A ++ +++ A +++ KA+Q +F AW +L
Sbjct: 490 SYDKAVEHKPDSAEYWYQRGNAFVNLNKHRDAVDSYQKAVQFQPDFYRAWYSQGSILNNL 549
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++AL +Q + + +A++ R LH L ++ +A+ + + P++ + Y
Sbjct: 550 NQYQEALAAFEQAVKLQPNSYEAWYGRAWALHQLQRYDEALMAYEKAVKLRPNSEQAWYN 609
Query: 625 RASCYHAIGEYREAV 639
R + ++ + +Y++A+
Sbjct: 610 RGNVFYTLEQYQDAI 624
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A +Y +AIS FDQ+ K P E RG + + AAI+ + +A++ P
Sbjct: 406 RGEALAALQRYEAAISAFDQVTKLQPEDVETWERRGMVQMKLQRYSAAIASYDKALEIQP 465
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ AW RRG A L + EAI+ KA+E +P+SA+ ++RG AV+
Sbjct: 466 NYSSAWYRRGWALHNLQQYEEAIKSYDKAVEHKPDSAEYWYQRGNAFVNLNKHRDAVDSY 525
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
V+ + A+ G L+++ +Y++A A +A++L N EAW L
Sbjct: 526 QKAVQFQPDFYRAWYSQGSILNNLNQYQEALAAFEQAVKLQPNSYEAWYGRAWALHQLQR 585
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++AL ++ + + +A++ RG + + L Q++ AI + S+ + RA
Sbjct: 586 YDEALMAYEKAVKLRPNSEQAWYNRGNVFYTLEQYQDAIAAYDQAVAHKRSHYQAWNSRA 645
Query: 627 SCYHAIGEYREAV 639
+ + Y EA+
Sbjct: 646 NALFNLKRYNEAL 658
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 117/250 (46%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+++K + V+ RG+ Q+ +Y++AI+ +D+ L+ P Y A RG A ++
Sbjct: 425 QVTKLQPEDVETWERRGMVQMKLQRYSAAIASYDKALEIQPNYSSAWYRRGWALHNLQQY 484
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI + +A++ P + E W +RG A L + +A+ KA++F+P+ + +G
Sbjct: 485 EEAIKSYDKAVEHKPDSAEYWYQRGNAFVNLNKHRDAVDSYQKAVQFQPDFYRAWYSQGS 544
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + A+ VKL + A+ AL + Y +A A+ KA++L N
Sbjct: 545 ILNNLNQYQEALAAFEQAVKLQPNSYEAWYGRAWALHQLQRYDEALMAYEKAVKLRPNSE 604
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+AW + + L + A+ Q + + +A++ R L L ++ +A+ +
Sbjct: 605 QAWYNRGNVFYTLEQYQDAIAAYDQAVAHKRSHYQAWNSRANALFNLKRYNEALTSYENA 664
Query: 612 LGIDPSNIEC 621
L P+ E
Sbjct: 665 LTYQPNYKEA 674
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ RG + + + A+ + V+L + A+ G AL ++G+ + A +A+ +AIQ+
Sbjct: 336 YNRGETLLELRRYEDALSAYNRAVELQPDYAEAWLGQGDALLALGQSEAALDAYDQAIQI 395
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
R + EAW + L E A+ QV + + + RG++ L ++ AI
Sbjct: 396 QREYPEAWKGRGEALAALQRYEAAISAFDQVTKLQPEDVETWERRGMVQMKLQRYSAAIA 455
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P+ Y R H + +Y EA+
Sbjct: 456 SYDKALEIQPNYSSAWYRRGWALHNLQQYEEAI 488
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QS 66
D+ L ++ + D+ +++ A R E L +L+ + AI D + Q
Sbjct: 374 DALLALGQSEAALDAYDQAIQIQREYPEAWKGRGE--ALAALQRYEAAISAFDQVTKLQP 431
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
+++ R +L+ + I DKAL++ P A+ +G A L + EEA+ +
Sbjct: 432 EDVETWERRGMVQMKLQRYSAAIASYDKALEIQPNYSSAWYRRGWALHNLQQYEEAIKSY 491
Query: 127 EKGYEH 132
+K EH
Sbjct: 492 DKAVEH 497
>gi|301111123|ref|XP_002904641.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
putative [Phytophthora infestans T30-4]
gi|262095958|gb|EEY54010.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
putative [Phytophthora infestans T30-4]
Length = 579
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 127/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG EGK+ +A + + ++ +P + +A RG R +AA+ D+T+A++ +
Sbjct: 228 ARGFQYRQEGKFQAAADEYSRAIQLNPQHFKAFFNRGFVYDKIRRFDAAVEDYTQALKMD 287
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A RG + G+ A+ D ++A+E P +AD H RG + K +F A+ D
Sbjct: 288 PHNAFALYNRGISLDRSGDYQGALTDFTRAIELLPTNADFYHNRGFCHRKQGNFELAIAD 347
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++ + + + + +G Y++A + + A++++ A+ + Y +
Sbjct: 348 YSRAIEFNPNHFKSLYNRAYSYDKLGRYQEAAQDYTAALRVEPENANAYHNRGSTYDKMR 407
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++ +A+ + + + R +Y+ RGL LG+H++A++D + L +DP + + R
Sbjct: 408 DTTRAIADFDRAIALQPRSVSSYNSRGLCYDQLGRHQEALQDFALALTLDPRSAVFYHNR 467
Query: 626 ASCYHAIGEYREAV 639
C +G + EAV
Sbjct: 468 GYCLRNMGRFEEAV 481
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 120/255 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG ++ +A+ + Q LK DP AL RG + + + A++DFT AI+
Sbjct: 261 FNRGFVYDKIRRFDAAVEDYTQALKMDPHNAFALYNRGISLDRSGDYQGALTDFTRAIEL 320
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ + + RG G AI D S+A+EF PN L+ R K + A +
Sbjct: 321 LPTNADFYHNRGFCHRKQGNFELAIADYSRAIEFNPNHFKSLYNRAYSYDKLGRYQEAAQ 380
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D +A ++++ EN +AY G + + +A +AI L + ++ Y L
Sbjct: 381 DYTAALRVEPENANAYHNRGSTYDKMRDTTRAIADFDRAIALQPRSVSSYNSRGLCYDQL 440
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++AL+ L +D R + YH RG L +G+ ++A++D SS L ++P N+
Sbjct: 441 GRHQEALQDFALALTLDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSALALEPRNVAAYNN 500
Query: 625 RASCYHAIGEYREAV 639
R + ++EAV
Sbjct: 501 RGYALRKLRRFQEAV 515
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 119/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI+ G Y A++ F + ++ P + RG Q E AI+D++ AI+ N
Sbjct: 296 NRGISLDRSGDYQGALTDFTRAIELLPTNADFYHNRGFCHRKQGNFELAIADYSRAIEFN 355
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ ++ R + LG EA QD + AL EP +A+ H RG K +D A+ D
Sbjct: 356 PNHFKSLYNRAYSYDKLGRYQEAAQDYTAALRVEPENANAYHNRGSTYDKMRDTTRAIAD 415
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + S+Y GL +G +++A + A+ LD + + +++
Sbjct: 416 FDRAIALQPRSVSSYNSRGLCYDQLGRHQEALQDFALALTLDPRSAVFYHNRGYCLRNMG 475
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A++ L ++ R AY+ RG L L + ++A+ D ++ L IDP N L R
Sbjct: 476 RFEEAVQDYSSALALEPRNVAAYNNRGYALRKLRRFQEAVADYTTALTIDPQNTRTLSNR 535
Query: 626 ASCYHAIGEYREAV 639
A + EA+
Sbjct: 536 AYSLAKMQHIEEAI 549
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A + L+ +P A RG+ R+ AI+DF AI P + ++
Sbjct: 373 GRYQEAAQDYTAALRVEPENANAYHNRGSTYDKMRDTTRAIADFDRAIALQPRSVSSYNS 432
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG LG EA+QD + AL +P SA H RG F AV+D S+ + L+
Sbjct: 433 RGLCYDQLGRHQEALQDFALALTLDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSALALEP 492
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N +AY G AL + +++A + A+ +D + + + E+A+
Sbjct: 493 RNVAAYNNRGYALRKLRRFQEAVADYTTALTIDPQNTRTLSNRAYSLAKMQHIEEAIADY 552
Query: 575 QQVLYIDKRFSKAYHLRGLL 594
Q+L +D + S + H R +L
Sbjct: 553 SQILTLDPQNSYSRHNRAIL 572
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 112/249 (44%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
TR + + DF +RG +G + AI+ + + ++ +P + ++L R +
Sbjct: 314 FTRAIELLPTNADFYHNRGFCHRKQGNFELAIADYSRAIEFNPNHFKSLYNRAYSYDKLG 373
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ A D+T A++ P A+ RG + ++ AI D +A+ +P S + R
Sbjct: 374 RYQEAAQDYTAALRVEPENANAYHNRGSTYDKMRDTTRAIADFDRAIALQPRSVSSYNSR 433
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ + A++D + + LD + Y G L ++G +++A + + A+ L+
Sbjct: 434 GLCYDQLGRHQEALQDFALALTLDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSALALEPR 493
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ + + L ++A+ L ID + ++ R L + ++AI D S
Sbjct: 494 NVAAYNNRGYALRKLRRFQEAVADYTTALTIDPQNTRTLSNRAYSLAKMQHIEEAIADYS 553
Query: 610 SGLGIDPSN 618
L +DP N
Sbjct: 554 QILTLDPQN 562
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 117/310 (37%), Gaps = 56/310 (18%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A + Y I +++ D AL RG A + +++ AI DF+ +Q
Sbjct: 69 LARGQALFKQANYDQTIQDLTEVVALDSSNAAALYTRGLAYSRLGKVQLAIRDFSRTLQI 128
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQD--------------------------------- 471
NP A R + G+ V AI D
Sbjct: 129 NPEHVNAAYARASCYNSQGDFVRAIDDYNCALLKDKKLKLQQKQQQELHRSANLTRQQLQ 188
Query: 472 -------------LSKALEFEP----------NSADILHERGIVNFKFKDFNAAVEDLSA 508
LS+ ++ P + A++ H RG + F AA ++ S
Sbjct: 189 RQKQDESVSNTLVLSQRMKKAPISGTNNFSALDQAEVHHARGFQYRQEGKFQAAADEYSR 248
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++L+ ++ A+ G I + A E + +A+++D + A + + +
Sbjct: 249 AIQLNPQHFKAFFNRGFVYDKIRRFDAAVEDYTQALKMDPHNAFALYNRGISLDRSGDYQ 308
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
AL + + + + YH RG G + AI D S + +P++ + LY RA
Sbjct: 309 GALTDFTRAIELLPTNADFYHNRGFCHRKQGNFELAIADYSRAIEFNPNHFKSLYNRAYS 368
Query: 629 YHAIGEYREA 638
Y +G Y+EA
Sbjct: 369 YDKLGRYQEA 378
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
AN ++ ++ L +V+ +D + A + RGL LG+ + AI+D S L I+P ++ Y
Sbjct: 79 ANYDQTIQDLTEVVALDSSNAAALYTRGLAYSRLGKVQLAIRDFSRTLQINPEHVNAAYA 138
Query: 625 RASCYHAIGEYREAV 639
RASCY++ G++ A+
Sbjct: 139 RASCYNSQGDFVRAI 153
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 14/196 (7%)
Query: 315 SASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRIS 374
+A+L N+ +Y + +K D+T + + + L+ S + ++ C ++
Sbjct: 383 TAALRVEPENANAYHNRGSTYDKMRDTTRAIADFD-RAIALQPRSVSSYNSRGLCYDQLG 441
Query: 375 KSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+ + DF L+ RG N G++ A+ + L +P A R
Sbjct: 442 RHQEALQDFALALTLDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSALALEPRNVAAYNNR 501
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A R + A++D+T A+ +P R + A + EAI D S+ L +P
Sbjct: 502 GYALRKLRRFQEAVADYTTALTIDPQNTRTLSNRAYSLAKMQHIEEAIADYSQILTLDPQ 561
Query: 482 SADILHERGIVNFKFK 497
++ H R I+ K K
Sbjct: 562 NSYSRHNRAILTAKMK 577
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 108/288 (37%), Gaps = 56/288 (19%)
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
L +P + L+ RG A Q + I D TE + + S A RG A + LG+
Sbjct: 58 LVREPKDVKVLLARGQALFKQANYDQTIQDLTEVVALDSSNAAALYTRGLAYSRLGKVQL 117
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC------------------ 509
AI+D S+ L+ P + + R DF A++D +
Sbjct: 118 AIRDFSRTLQINPEHVNAAYARASCYNSQGDFVRAIDDYNCALLKDKKLKLQQKQQQELH 177
Query: 510 ---------VKLDKENKSAYTYLGLA-------LSSIGEYK---KAEEAHLKAIQ----- 545
++ K+++S L L+ +S + +AE H + Q
Sbjct: 178 RSANLTRQQLQRQKQDESVSNTLVLSQRMKKAPISGTNNFSALDQAEVHHARGFQYRQEG 237
Query: 546 --------------LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
L+ +A+ + Y + + A+E Q L +D + A + R
Sbjct: 238 KFQAAADEYSRAIQLNPQHFKAFFNRGFVYDKIRRFDAAVEDYTQALKMDPHNAFALYNR 297
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G+ L G ++ A+ D + + + P+N + + R C+ G + A+
Sbjct: 298 GISLDRSGDYQGALTDFTRAIELLPTNADFYHNRGFCHRKQGNFELAI 345
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 49 LRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+R+ ++AI D +A Q + +R CY QL H+ ++D AL LDP Y
Sbjct: 406 MRDTTRAIADFDRAIALQPRSVSSYNSRGLCYDQLGRHQEALQDFALALTLDPRSAVFYH 465
Query: 108 LKGCAFSALGRKEEALSVW 126
+G +GR EEA+ +
Sbjct: 466 NRGYCLRNMGRFEEAVQDY 484
>gi|428206561|ref|YP_007090914.1| hypothetical protein Chro_1521 [Chroococcidiopsis thermalis PCC
7203]
gi|428008482|gb|AFY87045.1| Tetratricopeptide TPR_1 repeat-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 379
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 1/263 (0%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S+ +F +G+ + +YA A+ D ++ P Y +A RG A E AI+
Sbjct: 6 SLEAEFFYQQGLRRNKAEQYAEALLSLDVAVEYKPDYADAWSQRGIALGSLNRHEEAIAS 65
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F AI P A W RG A LG +EA+ +ALEF P++A I H RGI
Sbjct: 66 FDRAITLRPDASWVWHNRGIALGKLGRYIEALNSFDRALEFNPDAATIWHNRGITLIDLG 125
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ AV + ++L + A+ G AL + +Y A ++ +A++ + L W +
Sbjct: 126 CYEKAVINFEKTIQLRPDAYWAWYNRGTALGHLKQYAAAVDSFDRALEFQPDDLLTWNNR 185
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
D KA+ + L ID +SKA++ +G+ L LG A+ + ++P+
Sbjct: 186 GITLSDWGEYTKAVASFDRALAIDPEYSKAWYNKGVALRKLGDFTAAVVCFDRTVELEPN 245
Query: 618 NIECLYLRASCYHAIGEYREAVI 640
+ Y R +GE +EA I
Sbjct: 246 DFWAWYNRGLSLAQVGE-KEAAI 267
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 114/255 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G+Y A++ FD+ L+ +P RG E A+ +F + IQ
Sbjct: 82 NRGIALGKLGRYIEALNSFDRALEFNPDAATIWHNRGITLIDLGCYEKAVINFEKTIQLR 141
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A AW RG A L + A+ +ALEF+P+ + RGI + ++ AV
Sbjct: 142 PDAYWAWYNRGTALGHLKQYAAAVDSFDRALEFQPDDLLTWNNRGITLSDWGEYTKAVAS 201
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +D E A+ G+AL +G++ A + ++L+ N AW + +
Sbjct: 202 FDRALAIDPEYSKAWYNKGVALRKLGDFTAAVVCFDRTVELEPNDFWAWYNRGLSLAQVG 261
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E A+ + L I + ++ GL L+ L ++++AI + L + P Y
Sbjct: 262 EKEAAIASYKHALSIQPQDMAVWYDCGLALYELCRYQEAIAIYTKALEVQPHTPIFWYNI 321
Query: 626 ASCYHAIGEYREAVI 640
A CY + +AVI
Sbjct: 322 ACCYALQSQAEQAVI 336
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + +YA+A+ FD+ L+ P RG + E A++ F A+ +
Sbjct: 150 NRGTALGHLKQYAAAVDSFDRALEFQPDDLLTWNNRGITLSDWGEYTKAVASFDRALAID 209
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G A LG+ A+ + +E EPN + RG+ + + AA+
Sbjct: 210 PEYSKAWYNKGVALRKLGDFTAAVVCFDRTVELEPNDFWAWYNRGLSLAQVGEKEAAIAS 269
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ + + GLAL + Y++A + KA+++ + W ++ Y +
Sbjct: 270 YKHALSIQPQDMAVWYDCGLALYELCRYQEAIAIYTKALEVQPHTPIFWYNIACCYALQS 329
Query: 566 NSEKALECLQQVLYI 580
+E+A+ LQQ + I
Sbjct: 330 QAEQAVISLQQAIQI 344
>gi|86608982|ref|YP_477744.1| TPR repeat-containing protein kinase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557524|gb|ABD02481.1| tetratricopeptide repeat/protein kinase domain protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 1270
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 126/259 (48%), Gaps = 13/259 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ + + G A + F +++K DP EA RG AR +L+ A+ D+T+A+Q
Sbjct: 434 FNRGVVRGHLGDAQGAAADFSEVIKRDPQDGEAYFNRGVARVQLSDLQGAVEDYTQALQL 493
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-------PNS-----ADILHERGIV 492
+P G+A+ RG AR ALG+ A++D S+AL P + AD+ +R +
Sbjct: 494 DPRHGKAYYHRGLARQALGDPQGAVEDFSQALSLRSAEATELPEAEAAAQADLYLQRAMA 553
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
A+ D ++LD AY GLA +G+ A +A++LD +
Sbjct: 554 YLSSNTLEPALADCEQALRLDPNLSRAYLCRGLARQGLGDPGGALADFNRALELDPQMAK 613
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
A+ + + DL N E AL L Q + +D + + AY RG + LG A++D ++ L
Sbjct: 614 AYLNRGIAHLDLGNIEAALSDLNQAIALDPQDASAYSSRGRIHWLLGDPLAALRDYTAAL 673
Query: 613 GIDPSNIECLYLRASCYHA 631
DP N + LY HA
Sbjct: 674 ERDPQNPQ-LYFNRGQLHA 691
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 123/273 (45%), Gaps = 24/273 (8%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA+ Y A++ + Q L +P + A RG A + + AI D++ AI+
Sbjct: 366 FNRGIARYRLEDYEGAVADYTQALGLNPQWAVAYYNRGNAYRQLNQQQQAIEDYSRAIEL 425
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG R LG++ A D S+ ++ +P + RG+ + D AVE
Sbjct: 426 NPEDVRAYFNRGVVRGHLGDAQGAAADFSEVIKRDPQDGEAYFNRGVARVQLSDLQGAVE 485
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI-----------------QLD 547
D + ++LD + AY + GLA ++G+ + A E +A+ Q D
Sbjct: 486 DYTQALQLDPRHGKAYYHRGLARQALGDPQGAVEDFSQALSLRSAEATELPEAEAAAQAD 545
Query: 548 RNFLEAWGHLTQFYQDLANS-EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
A +L+ +N+ E AL +Q L +D S+AY RGL GLG A+
Sbjct: 546 LYLQRAMAYLS------SNTLEPALADCEQALRLDPNLSRAYLCRGLARQGLGDPGGALA 599
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + L +DP + R + +G A+
Sbjct: 600 DFNRALELDPQMAKAYLNRGIAHLDLGNIEAAL 632
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 11/245 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKED-----PMYPEALIG----RGTARAFQRELEAAI 435
+RG + +A F Q+L+ P PE L+ RG AR + + A+
Sbjct: 684 FNRGQLHAEREDWPAACEDFSQVLQWAARPGIPRGPELLLNAHLRRGMARQRLGDWQGAL 743
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILHERGIVN 493
+DF +A+Q +P +G A+ RGQ RAALG+ + AIQD +AL ADI +
Sbjct: 744 ADFDQALQGDPQSGLAYFHRGQVRAALGDGLGAIQDYHQALALGVAVAEADIRRDLARAQ 803
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ D AA+E L+ V+L E + +G + +A + + ++ D A
Sbjct: 804 IQTGDLQAALEQLNEAVRLQPERRDLRQERAELCRQLGRWPEAIADYDEVLRQDPQDWTA 863
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
W + + N + A++ L +VL D +A RG L LGQ + A++DL+ L
Sbjct: 864 WLGRGMAHGQVGNWDSAIQDLSRVLQQDPDHREALWHRGQALQQLGQTEAALQDLNRLLQ 923
Query: 614 IDPSN 618
DP +
Sbjct: 924 RDPQH 928
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 98/230 (42%), Gaps = 39/230 (16%)
Query: 387 RGIAQVNEGKYASAISIFDQI--LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG A+ G A AI+ + Q+ L D A RG AR + E A++D+T+A+
Sbjct: 335 RGSARYKSGDLAGAIADYTQVIQLAGDA---RAYFNRGIARYRLEDYEGAVADYTQALGL 391
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG A L + +AI+D S+A+E P RG+V D A
Sbjct: 392 NPQWAVAYYNRGNAYRQLNQQQQAIEDYSRAIELNPEDVRAYFNRGVVRGHLGDAQGAAA 451
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S +K D ++ AY G+A + + + A E + +A+QL
Sbjct: 452 DFSEVIKRDPQDGEAYFNRGVARVQLSDLQGAVEDYTQALQL------------------ 493
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
D R KAY+ RGL LG + A++D S L +
Sbjct: 494 ----------------DPRHGKAYYHRGLARQALGDPQGAVEDFSQALSL 527
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 118/247 (47%), Gaps = 8/247 (3%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I + + ++ L RG+A+ G + A++ FDQ L+ DP A RG RA +
Sbjct: 715 IPRGPELLLNAHLRRGMARQRLGDWQGALADFDQALQGDPQSGLAYFHRGQVRAALGDGL 774
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAAL--GESVEAIQDLSKALEFEPNSADILHERG 490
AI D+ +A+ + EA RR ARA + G+ A++ L++A+ +P D+ ER
Sbjct: 775 GAIQDYHQALALGVAVAEADIRRDLARAQIQTGDLQAALEQLNEAVRLQPERRDLRQERA 834
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + + A+ D ++ D ++ +A+ G+A +G + A + + +Q D +
Sbjct: 835 ELCRQLGRWPEAIADYDEVLRQDPQDWTAWLGRGMAHGQVGNWDSAIQDLSRVLQQDPDH 894
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL------GQHKKA 604
EA H Q Q L +E AL+ L ++L D + A RG LL L G +A
Sbjct: 895 REALWHRGQALQQLGQTEAALQDLNRLLQRDPQHRMARLARGSLLLTLAVRGTDGPTNRA 954
Query: 605 IKDLSSG 611
+D SG
Sbjct: 955 EQDRVSG 961
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 1/222 (0%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ R +A Q + + AI+D T AIQ +P A+ +RG AR G+ AI D ++ ++
Sbjct: 298 LLARAQEKARQGDFQGAIADCTLAIQLDPQNSRAYSQRGSARYKSGDLAGAIADYTQVIQ 357
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
A RGI ++ +D+ AV D + + L+ + AY G A + + ++A
Sbjct: 358 LA-GDARAYFNRGIARYRLEDYEGAVADYTQALGLNPQWAVAYYNRGNAYRQLNQQQQAI 416
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
E + +AI+L+ + A+ + L +++ A +V+ D + +AY RG+
Sbjct: 417 EDYSRAIELNPEDVRAYFNRGVVRGHLGDAQGAAADFSEVIKRDPQDGEAYFNRGVARVQ 476
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + A++D + L +DP + + Y R A+G+ + AV
Sbjct: 477 LSDLQGAVEDYTQALQLDPRHGKAYYHRGLARQALGDPQGAV 518
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 156/339 (46%), Gaps = 17/339 (5%)
Query: 317 SLNDSNTNSESYSKS-SISDNKSSDSTES----RSKLSFKWDMLKETSNEAKRNKKFCVT 371
+L D E +S++ S+ ++++ E+ ++ L + M +SN + C
Sbjct: 510 ALGDPQGAVEDFSQALSLRSAEATELPEAEAAAQADLYLQRAMAYLSSNTLEPALADCEQ 569
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+ ++S + L RG+A+ G A++ F++ L+ DP +A + RG A +
Sbjct: 570 ALRLDPNLSRAY-LCRGLARQGLGDPGGALADFNRALELDPQMAKAYLNRGIAHLDLGNI 628
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
EAA+SD +AI +P A+ RG+ LG+ + A++D + ALE +P + + RG
Sbjct: 629 EAALSDLNQAIALDPQDASAYSSRGRIHWLLGDPLAALRDYTAALERDPQNPQLYFNRGQ 688
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENK---------SAYTYLGLALSSIGEYKKAEEAHLK 542
++ + +D+ AA ED S ++ +A+ G+A +G+++ A +
Sbjct: 689 LHAEREDWPAACEDFSQVLQWAARPGIPRGPELLLNAHLRRGMARQRLGDWQGALADFDQ 748
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL--GQ 600
A+Q D A+ H Q L + A++ Q L + ++A R L + G
Sbjct: 749 ALQGDPQSGLAYFHRGQVRAALGDGLGAIQDYHQALALGVAVAEADIRRDLARAQIQTGD 808
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ A++ L+ + + P + RA +G + EA+
Sbjct: 809 LQAALEQLNEAVRLQPERRDLRQERAELCRQLGRWPEAI 847
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 23/259 (8%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ AI+ +D++L++DP A +GRG A ++AI D + +Q +P EA
Sbjct: 841 GRWPEAIADYDEVLRQDPQDWTAWLGRGMAHGQVGNWDSAIQDLSRVLQQDPDHREALWH 900
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RGQA LG++ A+QDL++ L+ +P RG + AV +
Sbjct: 901 RGQALQQLGQTEAALQDLNRLLQRDPQHRMARLARGSLLLTL-----AVRGTDGPTNRAE 955
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN--------FLEAWGHLTQFYQDLAN 566
+++ + G +G Y +AE + IQ + +LEA Q + N
Sbjct: 956 QDRVS----GTESLELGYYAQAESDFDQVIQEEAQDGEQSRQLYLEAHLKRAQVRRLRHN 1011
Query: 567 SEKALECLQQVLYI------DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
E A+ +VL + + ++A RGL G A+ D ++ + P +
Sbjct: 1012 LEGAIADWDRVLELASPGDPEVLVTEALLYRGLCRQERGDLAGALADFTALIQQQPQASQ 1071
Query: 621 CLYLRASCYHAIGEYREAV 639
LRA+ + A+G+ A+
Sbjct: 1072 AFALRATVHLALGDQEMAL 1090
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 26/262 (9%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKY--ASAISIFDQILK----EDP--MYPEALIGRGTARA 426
+S+ + ++ L R AQV ++ AI+ +D++L+ DP + EAL+ RG R
Sbjct: 990 QSRQLYLEAHLKR--AQVRRLRHNLEGAIADWDRVLELASPGDPEVLVTEALLYRGLCRQ 1047
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-----PN 481
+ +L A++DFT IQ P A +A+ R ALG+ A+ DL +AL + N
Sbjct: 1048 ERGDLAGALADFTALIQQQPQASQAFALRATVHLALGDQEMALADLDQALSLDRDWGVAN 1107
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+A +RG ++ + A+ D + + L+ + SA + L G+ KA E +
Sbjct: 1108 AALAYRQRGDLHRQANCPELAIADYTQALALNPQEHSALLHRALLWDGEGQTDKAIEDYT 1167
Query: 542 KAIQLDRNFLE--------AWGHLTQ--FYQDLANSEKALE-CLQQVLYIDKRFSKAYHL 590
+ +QL+ + E W + Q F + + ++A+ C D KA+
Sbjct: 1168 RLLQLELDPQERVWVLNNRGWAYAQQGDFSAAIRDYDQAITLCTADASDRDPCHLKAHFN 1227
Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
R L LG ++A +D + L
Sbjct: 1228 RALARTALGDWQRACQDFQAAL 1249
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
RA Y + + DC++AL+LDP L +AY+ +G A LG AL
Sbjct: 549 QRAMAYLSSNTLEPALADCEQALRLDPNLSRAYLCRGLARQGLGDPGGAL---------- 598
Query: 134 LHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLT-VSES-GLNANDKMSETSEN 191
AD + LEL+ + A +R + D+ N ++L+ ++++ L+ D + +S
Sbjct: 599 ----ADFNRALELDPQMAKAYLNRGI-AHLDLGNIEAALSDLNQAIALDPQDASAYSSRG 653
Query: 192 HNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRS 225
+ D + RD + + +P L R
Sbjct: 654 RIHWLLGDPLAALRDYTAALERDPQNPQLYFNRG 687
>gi|428310633|ref|YP_007121610.1| hypothetical protein Mic7113_2401 [Microcoleus sp. PCC 7113]
gi|428252245|gb|AFZ18204.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 595
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 132/254 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ + AI FDQ ++ +P P A RG A + +AAI D+++ I+
Sbjct: 209 NQGVEKLKKEDRRGAIQDFDQAIRLNPNNPLAYGNRGNAHYDLGDYKAAIEDYSQMIRLE 268
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR L + AI+D + + +PN A+ ++RGI F+ K++ AA+ED
Sbjct: 269 PNKAGAYYNRGLARYDLQDWQGAIEDFDQLIRLQPNDAEAYYKRGITYFELKNYRAAIED 328
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ ++L+ AY GLA S G+ ++A E + KA++L+ +A+ + L
Sbjct: 329 LNQVIRLNPNEAKAYVSRGLARSEAGDQREAMEDYTKALELEPKNAKAYYSRGRARFLLG 388
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A+E Q + ++ + + AY R L H+ AI D + + ++P+ E R
Sbjct: 389 DYGGAVEDYTQAIELEPKNAAAYTNRCSARLNLSAHQDAIVDCTQAIALNPNKDEPYNNR 448
Query: 626 ASCYHAIGEYREAV 639
Y + +Y+ A+
Sbjct: 449 CIAYFNLKDYQNAL 462
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 129/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ + + AI FDQ+++ P EA RG + AAI D + I+ N
Sbjct: 277 NRGLARYDLQDWQGAIEDFDQLIRLQPNDAEAYYKRGITYFELKNYRAAIEDLNQVIRLN 336
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG AR+ G+ EA++D +KALE EP +A + RG F D+ AVED
Sbjct: 337 PNEAKAYVSRGLARSEAGDQREAMEDYTKALELEPKNAKAYYSRGRARFLLGDYGGAVED 396
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ +N +AYT A ++ ++ A +AI L+ N E + + Y +L
Sbjct: 397 YTQAIELEPKNAAAYTNRCSARLNLSAHQDAIVDCTQAIALNPNKDEPYNNRCIAYFNLK 456
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + AL+ Q + + AY RG + LG + A++D + + ++ +N R
Sbjct: 457 DYQNALQDCSQAIRFNPNNDTAYSNRGDIRRNLGDKQGALEDYTQAIRLNSNNSIAYSNR 516
Query: 626 ASCYHAIGEYREAV 639
A +G+ + A+
Sbjct: 517 ADARRDLGDQQGAI 530
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 121/253 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI Y +AI +Q+++ +P +A + RG AR+ + A+ D+T+A++ P
Sbjct: 312 RGITYFELKNYRAAIEDLNQVIRLNPNEAKAYVSRGLARSEAGDQREAMEDYTKALELEP 371
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG+AR LG+ A++D ++A+E EP +A R A+ D
Sbjct: 372 KNAKAYYSRGRARFLLGDYGGAVEDYTQAIELEPKNAAAYTNRCSARLNLSAHQDAIVDC 431
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L+ Y +A ++ +Y+ A + +AI+ + N A+ + ++L +
Sbjct: 432 TQAIALNPNKDEPYNNRCIAYFNLKDYQNALQDCSQAIRFNPNNDTAYSNRGDIRRNLGD 491
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ ALE Q + ++ S AY R LG + AI D + + ++P N Y R
Sbjct: 492 KQGALEDYTQAIRLNSNNSIAYSNRADARRDLGDQQGAIADYTDAIRLNPKNAFAYYGRG 551
Query: 627 SCYHAIGEYREAV 639
+ A+G EA+
Sbjct: 552 LTHLAVGNKSEAI 564
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 113/224 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+SRG+A+ G A+ + + L+ +P +A RG AR + A+ D+T+AI+
Sbjct: 344 VSRGLARSEAGDQREAMEDYTKALELEPKNAKAYYSRGRARFLLGDYGGAVEDYTQAIEL 403
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A+ R AR L +AI D ++A+ PN + + R I F KD+ A++
Sbjct: 404 EPKNAAAYTNRCSARLNLSAHQDAIVDCTQAIALNPNKDEPYNNRCIAYFNLKDYQNALQ 463
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S ++ + N +AY+ G ++G+ + A E + +AI+L+ N A+ + +DL
Sbjct: 464 DCSQAIRFNPNNDTAYSNRGDIRRNLGDKQGALEDYTQAIRLNSNNSIAYSNRADARRDL 523
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + A+ + ++ + + AY+ RGL +G +AI D
Sbjct: 524 GDQQGAIADYTDAIRLNPKNAFAYYGRGLTHLAVGNKSEAITDF 567
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + + + AI DF +AI+ NP+ A+ RG A LG+ AI+D S+ + EP
Sbjct: 210 QGVEKLKKEDRRGAIQDFDQAIRLNPNNPLAYGNRGNAHYDLGDYKAAIEDYSQMIRLEP 269
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A + RG+ + +D+ A+ED ++L + AY G+ + Y+ A E
Sbjct: 270 NKAGAYYNRGLARYDLQDWQGAIEDFDQLIRLQPNDAEAYYKRGITYFELKNYRAAIEDL 329
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+ I+L+ N +A+ + + +A+E + L ++ + +KAY+ RG LG
Sbjct: 330 NQVIRLNPNEAKAYVSRGLARSEAGDQREAMEDYTKALELEPKNAKAYYSRGRARFLLGD 389
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ A++D + + ++P N R S + +++A++
Sbjct: 390 YGGAVEDYTQAIELEPKNAAAYTNRCSARLNLSAHQDAIV 429
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 1/206 (0%)
Query: 435 ISDFTEAIQS-NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
++ F +QS N + +++ +G + + AIQD +A+ PN+ RG +
Sbjct: 189 VAGFLVLLQSQNQTNAKSYYNQGVEKLKKEDRRGAIQDFDQAIRLNPNNPLAYGNRGNAH 248
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ D+ AA+ED S ++L+ AY GLA + +++ A E + I+L N EA
Sbjct: 249 YDLGDYKAAIEDYSQMIRLEPNKAGAYYNRGLARYDLQDWQGAIEDFDQLIRLQPNDAEA 308
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ Y +L N A+E L QV+ ++ +KAY RGL G ++A++D + L
Sbjct: 309 YYKRGITYFELKNYRAAIEDLNQVIRLNPNEAKAYVSRGLARSEAGDQREAMEDYTKALE 368
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
++P N + Y R +G+Y AV
Sbjct: 369 LEPKNAKAYYSRGRARFLLGDYGGAV 394
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA N Y +A+ Q ++ +P A RG R + + A+ D+T+AI+ N
Sbjct: 447 NRCIAYFNLKDYQNALQDCSQAIRFNPNNDTAYSNRGDIRRNLGDKQGALEDYTQAIRLN 506
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ R AR LG+ AI D + A+ P +A + RG+ + + + A+ D
Sbjct: 507 SNNSIAYSNRADARRDLGDQQGAIADYTDAIRLNPKNAFAYYGRGLTHLAVGNKSEAITD 566
Query: 506 LSACVKL 512
+L
Sbjct: 567 FQEASRL 573
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLL-AQS 66
++ Y L I + +++R++ A A R LA+ L++W AI D L+ Q
Sbjct: 246 NAHYDLGDYKAAIEDYSQMIRLEPNKAGAYYNR-GLARY-DLQDWQGAIEDFDQLIRLQP 303
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
+ + R Y +L+ ++ I D ++ ++L+P +AY+ +G A S G + EA+ +
Sbjct: 304 NDAEAYYKRGITYFELKNYRAAIEDLNQVIRLNPNEAKAYVSRGLARSEAGDQREAMEDY 363
Query: 127 EKGYE 131
K E
Sbjct: 364 TKALE 368
>gi|431808625|ref|YP_007235523.1| hypothetical protein BPP43_10480 [Brachyspira pilosicoli P43/6/78]
gi|430781984|gb|AGA67268.1| TPR domain-containing protein [Brachyspira pilosicoli P43/6/78]
Length = 925
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 142/256 (55%), Gaps = 1/256 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+++ KY +I+ F+++++ +P + RG + ++ E +I+DF + I+
Sbjct: 246 FNRGVSKAKLEKYEESIADFNKVIELNPKNEISYFARGVSNYELKKYEESIADFNKVIEL 305
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ EA+ RG A+A LG+ E+I D +KA+E PN+ RG+ K + + A+E
Sbjct: 306 NPNNKEAYFFRGLAKADLGQYKESIADFNKAIELNPNNERAYLNRGVSKVKLERYEEAIE 365
Query: 505 DLSACVKLDKE-NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + ++L+ + N+ AY G++ + + Y++A KAI+L+ N A+ +
Sbjct: 366 DFNKAIELNPDNNEEAYFNRGVSKAKLERYEEAIADFNKAIELNPNNEYAYFNKGFLKLI 425
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L +K+++ + + ++ K Y RG+ + L ++++AI+D + + ++P++ + +
Sbjct: 426 LGLYKKSIKDFNKAIKLNPNDEKLYFNRGISNYELKKYEEAIEDFNKAIKLNPNDEDAYF 485
Query: 624 LRASCYHAIGEYREAV 639
RA + +Y++AV
Sbjct: 486 NRAILKINLKKYKQAV 501
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 135/294 (45%), Gaps = 36/294 (12%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG+ K I F++ ++ E RG A+A + + AI DF +A
Sbjct: 37 DLYLNRGVLYSMNNKTNEGIEDFNKSIELKAKNKEVYFFRGLAKADLGQYKEAIEDFNKA 96
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP+ A+ RG ++A L + EAI+D +KA+E PN+ G+ + +
Sbjct: 97 IELNPNNERAYFSRGFSKAQLEKYKEAIEDFNKAIELNPNNERTYFSIGLSKVELEKHEE 156
Query: 502 AVEDLSACVKLDKENKSA-----------------------------------YTYLGLA 526
A+ED + ++L+ NK A Y Y GL+
Sbjct: 157 AIEDFNKVIELNPNNKRAYFNRGLSKLKLKKYKESIADFNKSIALNPDNNEEVYFYRGLS 216
Query: 527 LSSIGEYKKAEEAHLKAIQLDR-NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
+ + +Y+++ K+I L+ N EA+ + L E+++ +V+ ++ +
Sbjct: 217 KAKLEKYEESIVDFNKSIALNPDNNEEAYFNRGVSKAKLEKYEESIADFNKVIELNPKNE 276
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+Y RG+ + L +++++I D + + ++P+N E + R +G+Y+E++
Sbjct: 277 ISYFARGVSNYELKKYEESIADFNKVIELNPNNKEAYFFRGLAKADLGQYKESI 330
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
S G+++V K+ AI F+++++ +P A RG ++ ++ + +I+DF ++I
Sbjct: 142 FSIGLSKVELEKHEEAIEDFNKVIELNPNNKRAYFNRGLSKLKLKKYKESIADFNKSIAL 201
Query: 445 NPSAGE-AWKRRGQARAALGESVEAIQDLSKALEFEP-NSADILHERGIVNFKFKDFNAA 502
NP E + RG ++A L + E+I D +K++ P N+ + RG+ K + + +
Sbjct: 202 NPDNNEEVYFYRGLSKAKLEKYEESIVDFNKSIALNPDNNEEAYFNRGVSKAKLEKYEES 261
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------G 555
+ D + ++L+ +N+ +Y G++ + +Y+++ K I+L+ N EA+
Sbjct: 262 IADFNKVIELNPKNEISYFARGVSNYELKKYEESIADFNKVIELNPNNKEAYFFRGLAKA 321
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
L Q+ + +A+ KA+E ++ +AY RG+ L ++++AI+D + + ++
Sbjct: 322 DLGQYKESIADFNKAIE-------LNPNNERAYLNRGVSKVKLERYEEAIEDFNKAIELN 374
Query: 616 PSNIECLYL-RASCYHAIGEYREAV 639
P N E Y R + Y EA+
Sbjct: 375 PDNNEEAYFNRGVSKAKLERYEEAI 399
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 122/250 (48%), Gaps = 2/250 (0%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
V+ K AI + D+ +++D + + RG + + I DF ++I+ E
Sbjct: 13 VSSKKVEEAIKLIDEAIEKDNNDSDLYLNRGVLYSMNNKTNEGIEDFNKSIELKAKNKEV 72
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ RG A+A LG+ EAI+D +KA+E PN+ RG + + + A+ED + ++
Sbjct: 73 YFFRGLAKADLGQYKEAIEDFNKAIELNPNNERAYFSRGFSKAQLEKYKEAIEDFNKAIE 132
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+ N+ Y +GL+ + ++++A E K I+L+ N A+ + L ++++
Sbjct: 133 LNPNNERTYFSIGLSKVELEKHEEAIEDFNKVIELNPNNKRAYFNRGLSKLKLKKYKESI 192
Query: 572 ECLQQVLYIDK-RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCY 629
+ + ++ + Y RGL L +++++I D + + ++P N E Y R
Sbjct: 193 ADFNKSIALNPDNNEEVYFYRGLSKAKLEKYEESIVDFNKSIALNPDNNEEAYFNRGVSK 252
Query: 630 HAIGEYREAV 639
+ +Y E++
Sbjct: 253 AKLEKYEESI 262
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+++ +Y AI+ F++ ++ +P A +G + + +I DF +AI+
Sbjct: 383 FNRGVSKAKLERYEEAIADFNKAIELNPNNEYAYFNKGFLKLILGLYKKSIKDFNKAIKL 442
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ + + RG + L + EAI+D +KA++ PN D R I+ K + AV
Sbjct: 443 NPNDEKLYFNRGISNYELKKYEEAIEDFNKAIKLNPNDEDAYFNRAILKINLKKYKQAVN 502
Query: 505 DLSACVK 511
D K
Sbjct: 503 DFKIFAK 509
>gi|166362921|ref|YP_001655194.1| hypothetical protein MAE_01800, partial [Microcystis aeruginosa
NIES-843]
gi|166085294|dbj|BAG00002.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
Length = 594
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 148/317 (46%), Gaps = 23/317 (7%)
Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISV-----DFRLSRGI 389
D+K +D TE ++F E + N F S K++ + + +RGI
Sbjct: 137 DSKETDLTEVVQDVAF----WFEQGYQKLINGDFIGAIASYDKALEIKPDDHEAWYNRGI 192
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A N G++A AI+ +D+ L+ P +A RG A LE AI+ + +A++ P
Sbjct: 193 ALGNLGRFAEAIASYDRALEIKPDLHQAWYNRGIALGNLGRLEEAIASYDQALEIKPDQH 252
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
EAW RG A LG EAI KALE +P+ + + RGI F A+
Sbjct: 253 EAWYNRGIALGNLGRFAEAIASYDKALEIKPDDHEAWYNRGIALGNLGRFAEAIASYDRA 312
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQ 562
+++ + A+ G+AL ++G ++A ++ +A+++ + EAW G+L +F +
Sbjct: 313 LEIKPDLHQAWYNRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYNRGIALGNLGRFAE 372
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+A+ +KALE I +A++ RG L LG+ +AI L I P +
Sbjct: 373 AIASYDKALE-------IKPDDHQAWYGRGFALDDLGRFAEAIASYDKALEIKPDYHQAW 425
Query: 623 YLRASCYHAIGEYREAV 639
Y R +G + +A+
Sbjct: 426 YNRGFALGNLGRFEQAI 442
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G++A AI+ +D+ L+ P +A RG A LE AI+ + +A++
Sbjct: 291 NRGIALGNLGRFAEAIASYDRALEIKPDLHQAWYNRGIALGNLGRLEEAIASYDQALEIK 350
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI KALE +P+ + RG F A+
Sbjct: 351 PDQHEAWYNRGIALGNLGRFAEAIASYDKALEIKPDDHQAWYGRGFALDDLGRFAEAIAS 410
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G AL ++G +++A ++ +A++ + EAW + +L
Sbjct: 411 YDKALEIKPDYHQAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNRGVALGNLG 470
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
E+AL + L +A++ RG+ L L + ++A+ L I P
Sbjct: 471 RLEEALASYDKALEFKPDLHEAWNNRGIALDNLRRFEQALASYDKALEIKP 521
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 114/254 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AI+ +DQ L+ P EA RG A AI+ + +A++
Sbjct: 223 NRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYNRGIALGNLGRFAEAIASYDKALEIK 282
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALE +P+ + RGI A+
Sbjct: 283 PDDHEAWYNRGIALGNLGRFAEAIASYDRALEIKPDLHQAWYNRGIALGNLGRLEEAIAS 342
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G+AL ++G + +A ++ KA+++ + +AW DL
Sbjct: 343 YDQALEIKPDQHEAWYNRGIALGNLGRFAEAIASYDKALEIKPDDHQAWYGRGFALDDLG 402
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+A+ + L I + +A++ RG L LG+ ++AI L P E R
Sbjct: 403 RFAEAIASYDKALEIKPDYHQAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNR 462
Query: 626 ASCYHAIGEYREAV 639
+G EA+
Sbjct: 463 GVALGNLGRLEEAL 476
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AI+ +DQ L+ P EA RG A AI+ + +A++
Sbjct: 325 NRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYNRGIALGNLGRFAEAIASYDKALEIK 384
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG EAI KALE +P+ + RG F A+
Sbjct: 385 PDDHQAWYGRGFALDDLGRFAEAIASYDKALEIKPDYHQAWYNRGFALGNLGRFEQAIAS 444
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G+AL ++G ++A ++ KA++ + EAW + +L
Sbjct: 445 YDRALEFKPDLHEAWVNRGVALGNLGRLEEALASYDKALEFKPDLHEAWNNRGIALDNLR 504
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+AL + L I +A++ RG+ L L + ++A+ L I P + R
Sbjct: 505 RFEQALASYDKALEIKPDLHEAWNNRGIALANLRRFEQALASYDRALEIKPDFHQAWTNR 564
Query: 626 ASCYHAIGEYREAV 639
+ +G + EA+
Sbjct: 565 GNALRNLGRWAEAI 578
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 115/238 (48%), Gaps = 14/238 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G++A AI+ +D+ L+ P EA RG A AI+ + A++
Sbjct: 257 NRGIALGNLGRFAEAIASYDKALEIKPDDHEAWYNRGIALGNLGRFAEAIASYDRALEIK 316
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG EAI +ALE +P+ + + RGI F A+
Sbjct: 317 PDLHQAWYNRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYNRGIALGNLGRFAEAIAS 376
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
+++ ++ A+ G AL +G + +A ++ KA+++ ++ +AW G+L
Sbjct: 377 YDKALEIKPDDHQAWYGRGFALDDLGRFAEAIASYDKALEIKPDYHQAWYNRGFALGNLG 436
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+F Q +A+ ++ALE +A+ RG+ L LG+ ++A+ L P
Sbjct: 437 RFEQAIASYDRALE-------FKPDLHEAWVNRGVALGNLGRLEEALASYDKALEFKP 487
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G++A AI+ +D+ L+ P +A GRG A AI+ + +A++
Sbjct: 359 NRGIALGNLGRFAEAIASYDKALEIKPDDHQAWYGRGFALDDLGRFAEAIASYDKALEIK 418
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG +AI +ALEF+P+ + RG+ A+
Sbjct: 419 PDYHQAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNRGVALGNLGRLEEALAS 478
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G+AL ++ +++A ++ KA+++ + EAW + +L
Sbjct: 479 YDKALEFKPDLHEAWNNRGIALDNLRRFEQALASYDKALEIKPDLHEAWNNRGIALANLR 538
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
E+AL + L I F +A+ RG L LG+ +AI + I
Sbjct: 539 RFEQALASYDRALEIKPDFHQAWTNRGNALRNLGRWAEAIASYYQAVAI 587
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 355 LKETSNEAKRNKKFCVTRISK------SKSISVDFR-------LSRGIAQVNEGKYASAI 401
+K ++A N+ F + + + S +++F+ ++RG+A N G+ A+
Sbjct: 417 IKPDYHQAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNRGVALGNLGRLEEAL 476
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+ +D+ L+ P EA RG A R E A++ + +A++ P EAW RG A A
Sbjct: 477 ASYDKALEFKPDLHEAWNNRGIALDNLRRFEQALASYDKALEIKPDLHEAWNNRGIALAN 536
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERG 490
L +A+ +ALE +P+ RG
Sbjct: 537 LRRFEQALASYDRALEIKPDFHQAWTNRG 565
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 70 QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
Q NR F L + I D+AL+ P L +A++ +G A LGR EEAL+ ++K
Sbjct: 423 QAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNRGVALGNLGRLEEALASYDKA 482
Query: 130 YE 131
E
Sbjct: 483 LE 484
>gi|145516292|ref|XP_001444040.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411440|emb|CAK76643.1| unnamed protein product [Paramecium tetraurelia]
Length = 681
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 132/264 (50%), Gaps = 1/264 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+K IS D+ S+G + + AI + L +P + +++ RG A R AI
Sbjct: 265 NKKIS-DWFHSQGFEARKKEDFIKAIEFYTMALMFNPNHFKSIFNRGFAFDKLRMYNDAI 323
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
SD+T+AI+ + A+ RG + G+ AI+D +K++E +P+ AD H +G K
Sbjct: 324 SDYTKAIELDSKNAYAYYNRGISYDKKGDYNLAIKDFAKSIELDPSKADFYHNKGFAMKK 383
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
A+ + + C++LDK + AY +G++ KA++ +L A + N
Sbjct: 384 KNLIKEAILEFNECIRLDKNHFKAYYNRANCYEKLGDFDKAQQDYLIANNVVPNNPNTLT 443
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
H+ E+AL+ L ID+ ++ AY+ RGL+ +G+ +KA +D + + I+
Sbjct: 444 HIGILMDRQQKLEEALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFNKAIEIE 503
Query: 616 PSNIECLYLRASCYHAIGEYREAV 639
P N ++ R C ++ ++ EA+
Sbjct: 504 PQNPVYIHNRGCCKRSMNKFEEAL 527
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 136/625 (21%), Positives = 255/625 (40%), Gaps = 103/625 (16%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY---E 131
RA Y + ++ I+DC+K L+ D + Y L+GCA LG+ + A+ + K E
Sbjct: 48 RASAYIKKGEYQTAIQDCNKLLETDGENVGGYYLRGCANEKLGQIDLAIEDFSKVLSLDE 107
Query: 132 HALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMS-SLTVSESGLNANDKMSETSE 190
+ ++ + L L+ A +D + E D + S++ S ++++ L N M + E
Sbjct: 108 NHVNAAFARASCLNLKGDFAGAIEDYTRALEKDNAKSLNLSNSINKRSLLRNSSMKK-DE 166
Query: 191 NHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREV 250
+ K+D +++ + + DL N ++DE ++ ++
Sbjct: 167 PYPKTDAFQFTTKKNKYQQ-----PEEDDLMNPQNDEE-------------YLQNDQSQI 208
Query: 251 SENHNGSSDGSKST-HASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHD 309
+S S++ + S DA+E+N Q IDK ++
Sbjct: 209 QNQPQQTSFMSQNPLYTSIDANELNIQRPSQI------IDK---------------EISQ 247
Query: 310 KLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSK------LSFKWDMLKETSNEAK 363
+ S+ N +++ ISD S E+R K + F L N K
Sbjct: 248 PMQQQLISMIPENIKNDN---KKISDWFHSQGFEARKKEDFIKAIEFYTMALMFNPNHFK 304
Query: 364 R--NKKFCVTRI--------SKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQIL 408
N+ F ++ +K+I +D + +RGI+ +G Y AI F + +
Sbjct: 305 SIFNRGFAFDKLRMYNDAISDYTKAIELDSKNAYAYYNRGISYDKKGDYNLAIKDFAKSI 364
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ DP + +G A + ++ AI +F E I+ + + +A+ R LG+ +A
Sbjct: 365 ELDPSKADFYHNKGFAMKKKNLIKEAILEFNECIRLDKNHFKAYYNRANCYEKLGDFDKA 424
Query: 469 IQD----------------------------------LSKALEFEPNSADILHERGIVNF 494
QD + +L+ + N A + RG+V
Sbjct: 425 QQDYLIANNVVPNNPNTLTHIGILMDRQQKLEEALKYFNSSLKIDQNYAPAYNGRGLVFD 484
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K +F A +D + ++++ +N G S+ ++++A E KA+ LD +
Sbjct: 485 KIGEFEKACQDFNKAIEIEPQNPVYIHNRGCCKRSMNKFEEALEDFKKALSLDSKNPIIY 544
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
++ + + + E A C Q L + ++ + RG L LGQ +AI D + + +
Sbjct: 545 SNMGLVLRKMEDFETAAYCYSQELIYSQENTRTLNNRGYCLAKLGQFDEAIADYTKAIKL 604
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
DP NI +Y R C IGE+R+A+
Sbjct: 605 DPVNIHAIYNRGICNERIGEFRKAI 629
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 35/196 (17%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ--- 443
RG+ G++ A F++ ++ +P P + RG + + E A+ DF +A+
Sbjct: 479 RGLVFDKIGEFEKACQDFNKAIEIEPQNPVYIHNRGCCKRSMNKFEEALEDFKKALSLDS 538
Query: 444 SNP----SAGEAWKR---------------------------RGQARAALGESVEAIQDL 472
NP + G ++ RG A LG+ EAI D
Sbjct: 539 KNPIIYSNMGLVLRKMEDFETAAYCYSQELIYSQENTRTLNNRGYCLAKLGQFDEAIADY 598
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DKENKSAYTYLGLALSSIG 531
+KA++ +P + ++ RGI N + +F A+ED S + L + + +AY G +IG
Sbjct: 599 TKAIKLDPVNIHAIYNRGICNERIGEFRKAIEDFSQVIHLQNDQGANAYFNRGCCYDNIG 658
Query: 532 EYKKAEEAHLKAIQLD 547
E A + KA+++D
Sbjct: 659 EMDLAIADYSKALEID 674
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 94/263 (35%), Gaps = 69/263 (26%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + K A+ F+ LK D Y A GRG E E A DF +AI+ P
Sbjct: 446 GILMDRQQKLEEALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFNKAIEIEPQ 505
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF-------- 499
RG + ++ + EA++D KAL + + I G+V K +DF
Sbjct: 506 NPVYIHNRGCCKRSMNKFEEALEDFKKALSLDSKNPIIYSNMGLVLRKMEDFETAAYCYS 565
Query: 500 --------------------------NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+ A+ D + +KLD N A G+ IGE+
Sbjct: 566 QELIYSQENTRTLNNRGYCLAKLGQFDEAIADYTKAIKLDPVNIHAIYNRGICNERIGEF 625
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI-DKRFSKAYHLRG 592
+ KA+E QV+++ + + + AY RG
Sbjct: 626 R----------------------------------KAIEDFSQVIHLQNDQGANAYFNRG 651
Query: 593 LLLHGLGQHKKAIKDLSSGLGID 615
+G+ AI D S L ID
Sbjct: 652 CCYDNIGEMDLAIADYSKALEID 674
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-S 444
+RG G++ AI+ + + +K DP+ A+ RG E AI DF++ I
Sbjct: 580 NRGYCLAKLGQFDEAIADYTKAIKLDPVNIHAIYNRGICNERIGEFRKAIEDFSQVIHLQ 639
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
N A+ RG +GE AI D SKALE + ++ +
Sbjct: 640 NDQGANAYFNRGCCYDNIGEMDLAIADYSKALEIDNKTSKV 680
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQI------LKEDPMYPEALIGRGTARAFQRELEAAISDF 438
L++ +Q KY +I+I + I LK P + +AL R +A + E + AI D
Sbjct: 6 LTKLPSQQKVPKYRPSINIDNLIAICTGKLKNCPNHKKALYIRASAYIKKGEYQTAIQDC 65
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFK 497
+ ++++ + RG A LG+ AI+D SK L + N + R +N K
Sbjct: 66 NKLLETDGENVGGYYLRGCANEKLGQIDLAIEDFSKVLSLDENHVNAAFARASCLNLK-G 124
Query: 498 DFNAAVEDLSACVKLD 513
DF A+ED + ++ D
Sbjct: 125 DFAGAIEDYTRALEKD 140
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
T +++ P+ +A R A GE AIQD +K LE + + + RG N K
Sbjct: 32 TGKLKNCPNHKKALYIRASAYIKKGEYQTAIQDCNKLLETDGENVGGYYLRGCANEKLGQ 91
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ A+ED S + LD+ + +A L+ G++ A E + +A++ D
Sbjct: 92 IDLAIEDFSKVLSLDENHVNAAFARASCLNLKGDFAGAIEDYTRALEKD 140
>gi|282895338|ref|ZP_06303539.1| TPR repeat protein [Raphidiopsis brookii D9]
gi|281199589|gb|EFA74450.1| TPR repeat protein [Raphidiopsis brookii D9]
Length = 260
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 124/247 (50%), Gaps = 3/247 (1%)
Query: 366 KKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
K+ ++ +++ +++ +F +RG + + G AI+ F Q + P A RG
Sbjct: 4 KQGAISDFTQAINLNPNFAQPYYNRGATRNDLGDKQGAINDFSQFINFYPRNSLAYFNRG 63
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
A + + AISDFT+ I+ NP+ A+ RG +R+ LG+ AI D + + PN
Sbjct: 64 IAWHELGDKQRAISDFTQVIKLNPNNVAAYYNRGASRSDLGDKHGAINDFTTVINLNPNF 123
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A + RG+ D A+ D + ++LD + +AY G+A +G+ + A +
Sbjct: 124 AQPYYNRGLARHNLGDKQGAISDFTQSLRLDYRDPTAYNNRGIARYDMGDRQGAINDFTQ 183
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AIQ+ NF +A+ + ++ + + A+ Q + I+ F++AY+ RG + LG +
Sbjct: 184 AIQISPNFAQAYNNRGLARHNMGDKQGAISDFTQAIQINPNFAQAYNNRGATRNDLGDKE 243
Query: 603 KAIKDLS 609
AI+D +
Sbjct: 244 GAIRDFN 250
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G AIS F Q + +P + + RG R + + AI+DF++ I P A+
Sbjct: 2 GDKQGAISDFTQAINLNPNFAQPYYNRGATRNDLGDKQGAINDFSQFINFYPRNSLAYFN 61
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG+ AI D ++ ++ PN+ + RG D + A+ D + + L+
Sbjct: 62 RGIAWHELGDKQRAISDFTQVIKLNPNNVAAYYNRGASRSDLGDKHGAINDFTTVINLNP 121
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y GLA ++G+ + A ++++LD A+ + D+ + + A+
Sbjct: 122 NFAQPYYNRGLARHNLGDKQGAISDFTQSLRLDYRDPTAYNNRGIARYDMGDRQGAINDF 181
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q + I F++AY+ RGL H +G + AI D + + I+P+ + R + + +G+
Sbjct: 182 TQAIQISPNFAQAYNNRGLARHNMGDKQGAISDFTQAIQINPNFAQAYNNRGATRNDLGD 241
Query: 635 YREAV 639
A+
Sbjct: 242 KEGAI 246
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 68/127 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N G AIS F Q L+ D P A RG AR + + AI+DFT+AIQ +
Sbjct: 129 NRGLARHNLGDKQGAISDFTQSLRLDYRDPTAYNNRGIARYDMGDRQGAINDFTQAIQIS 188
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG AR +G+ AI D ++A++ PN A + RG D A+ D
Sbjct: 189 PNFAQAYNNRGLARHNMGDKQGAISDFTQAIQINPNFAQAYNNRGATRNDLGDKEGAIRD 248
Query: 506 LSACVKL 512
+ +L
Sbjct: 249 FNKASQL 255
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
T++ K +V +RG ++ + G AI+ F ++ +P + + RG AR
Sbjct: 79 FTQVIKLNPNNVAAYYNRGASRSDLGDKHGAINDFTTVINLNPNFAQPYYNRGLARHNLG 138
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AISDFT++++ + A+ RG AR +G+ AI D ++A++ PN A + R
Sbjct: 139 DKQGAISDFTQSLRLDYRDPTAYNNRGIARYDMGDRQGAINDFTQAIQISPNFAQAYNNR 198
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
G+ D A+ D + ++++ AY G + +G+ + A KA QL
Sbjct: 199 GLARHNMGDKQGAISDFTQAIQINPNFAQAYNNRGATRNDLGDKEGAIRDFNKASQL 255
>gi|145524609|ref|XP_001448132.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415665|emb|CAK80735.1| unnamed protein product [Paramecium tetraurelia]
Length = 879
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 131/264 (49%), Gaps = 1/264 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+K IS D+ S+G + + AI + L +P + +++ RG A R AI
Sbjct: 265 NKKIS-DWFHSQGFDARKKEDFIKAIEFYTMALMFNPNHFKSIFNRGFAFDKLRMYNDAI 323
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
SD+T+AI+ + A+ RG + G+ AI+D +K++E +P+ AD H +G K
Sbjct: 324 SDYTKAIEMDSKNAYAYYNRGISYDKKGDYNLAIKDFAKSIELDPSKADFYHNKGFAMKK 383
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
A+ + + C++LDK + AY +G++ KA++ +L A + N
Sbjct: 384 KNLVREAILEFNECIRLDKNHFKAYYNRANCYEKLGDFDKAQQDYLIANNVVPNNPNTLT 443
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
H+ E AL+ L ID+ ++ AY+ RGL+ +G+ +KA +D + + I+
Sbjct: 444 HIGILMDRQQKLEDALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFNKAIEIE 503
Query: 616 PSNIECLYLRASCYHAIGEYREAV 639
P N ++ R C ++ ++ EA+
Sbjct: 504 PQNPVYIHNRGCCKRSMNKFEEAL 527
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 34/212 (16%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q++LE A+ F +++ + + A+ RG +GE +A QD +KA+E EP + +H
Sbjct: 452 QQKLEDALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFNKAIEIEPQNPVYIH 511
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG F A+ED + LD +N Y+ +GL L + ++
Sbjct: 512 NRGCCKRSMNKFEEALEDFKKALSLDSKNPIIYSNMGLVLRKMEDF-------------- 557
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
E A+ C Q L + ++ + RG L LGQ +AI D
Sbjct: 558 --------------------ETAVYCYSQELIYSQENTRTLNNRGYCLAKLGQFDEAIAD 597
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + +DP NI +Y R C IGE+R+A+
Sbjct: 598 YTKAINLDPVNIHAIYNRGICNERIGEFRKAI 629
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + K+ A+ F + L D P G + E A+ +++ + +
Sbjct: 512 NRGCCKRSMNKFEEALEDFKKALSLDSKNPIIYSNMGLVLRKMEDFETAVYCYSQELIYS 571
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
RG A LG+ EAI D +KA+ +P + ++ RGI N + +F A+ED
Sbjct: 572 QENTRTLNNRGYCLAKLGQFDEAIADYTKAINLDPVNIHAIYNRGICNERIGEFRKAIED 631
Query: 506 LSACVKL-DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++ ++L + + +AY G +IGE A + KA+++D
Sbjct: 632 FTSVIQLQNDQGANAYFNRGCCYDNIGEMDLAIADYSKALEID 674
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 91/238 (38%), Gaps = 35/238 (14%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + K A+ F+ LK D Y A GRG E E A DF +AI+ P
Sbjct: 446 GILMDRQQKLEDALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFNKAIEIEPQ 505
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV---- 503
RG + ++ + EA++D KAL + + I G+V K +DF AV
Sbjct: 506 NPVYIHNRGCCKRSMNKFEEALEDFKKALSLDSKNPIIYSNMGLVLRKMEDFETAVYCYS 565
Query: 504 ------------------------------EDLSACVKLDKENKSAYTYLGLALSSIGEY 533
D + + LD N A G+ IGE+
Sbjct: 566 QELIYSQENTRTLNNRGYCLAKLGQFDEAIADYTKAINLDPVNIHAIYNRGICNERIGEF 625
Query: 534 KKAEEAHLKAIQLDRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+KA E IQL + A+ + Y ++ + A+ + L ID + SK Y +
Sbjct: 626 RKAIEDFTSVIQLQNDQGANAYFNRGCCYDNIGEMDLAIADYSKALEIDNKTSKKYQI 683
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQI------LKEDPMYPEALIGRGTARAFQRELEAAISDF 438
L++ +Q KY +I+I + I LK P + +AL R +A + E + AI D
Sbjct: 6 LTKLPSQQKVPKYRPSINIDNLIAICTGKLKNCPNHKKALYIRASAYIKKGEYQTAIQDC 65
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFK 497
+ ++++ + RG A LG+ AI+D SK L + N + R +N K
Sbjct: 66 NKLLETDSDNVGGYYLRGCANEKLGQIDLAIEDFSKVLSLDENHVNAAFARASCLNLK-G 124
Query: 498 DFNAAVEDLSACVKLD 513
DF A+ED + ++ D
Sbjct: 125 DFAGAIEDYTRALEKD 140
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
++ I+ T +++ P+ +A R A GE AIQD +K LE + ++ + RG
Sbjct: 24 IDNLIAICTGKLKNCPNHKKALYIRASAYIKKGEYQTAIQDCNKLLETDSDNVGGYYLRG 83
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
N K + A+ED S + LD+ + +A L+ G++ A E + +A++ D
Sbjct: 84 CANEKLGQIDLAIEDFSKVLSLDENHVNAAFARASCLNLKGDFAGAIEDYTRALEKD 140
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y+LRG LGQ AI+D S L +D +++ + RASC + G++ A+
Sbjct: 78 GYYLRGCANEKLGQIDLAIEDFSKVLSLDENHVNAAFARASCLNLKGDFAGAI 130
>gi|170738881|ref|YP_001767536.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
gi|168193155|gb|ACA15102.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
Length = 1056
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 134/255 (52%), Gaps = 2/255 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A ++ +Y AI+ ++Q L+ DP Y A + RG A + E + AI+D+ + +Q +
Sbjct: 133 NRGLAFFSKEEYDRAIADYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIADYNQVLQID 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVE 504
P + ++ RG A GE A+ D ++AL +P L RG V F+ K +++A+E
Sbjct: 193 PRSVVSYNNRGLAFQGKGEYDRAVADYNQALTLDPGYTIALINRGDV-FRIKGQYDSAIE 251
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + ++L+ ++K AY G + GEY +A + A+Q+D ++ A + +
Sbjct: 252 NYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVNRGDAFVSK 311
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ ++A+ L I+ ++ AY+ RG+ L G++ +AI D L +DP +
Sbjct: 312 GDYDRAIGDYGHALQINPNYAFAYNGRGVALQNKGEYDRAIMDYDQALRLDPKYVFAFAN 371
Query: 625 RASCYHAIGEYREAV 639
R + + GE+ A+
Sbjct: 372 RGDAFRSKGEHDVAI 386
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 122/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG++ N+ +Y AI ++Q+++ DP + A RG A + E AI+D+ +A+ +
Sbjct: 405 GRGLSFQNKAQYNRAIEDYEQVIRLDPRFVAAYNNRGFALVSKGEPTLAIADYDKALLLD 464
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG+A GE AI D +AL P A L+ R + + + A+
Sbjct: 465 PKSATVYANRGRAFQDKGEYDRAIADYDQALRLNPKDAIALNNRADILRLRHEHDRAIAS 524
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ + AY GLA GEY +A + +A+QL+ ++ A+ + Y+
Sbjct: 525 YDQALQLNPKYVGAYNSRGLAFQDKGEYDRAIANYDQALQLNPRYITAYINRGDAYRRKG 584
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+A+ Q L ID+ AY+ RGL H G++ +AI D L IDP R
Sbjct: 585 EHARAISDYNQALQIDQNSVIAYNNRGLCFHEQGEYDRAIIDYDRALQIDPMYSTGFINR 644
Query: 626 ASCYHAIGEYREAV 639
+H GEY A+
Sbjct: 645 GFAFHKKGEYDRAI 658
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 119/231 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +G+Y A++ ++Q L DP Y ALI RG + + ++AI ++ +A+Q N
Sbjct: 201 NRGLAFQGKGEYDRAVADYNQALTLDPGYTIALINRGDVFRIKGQYDSAIENYNQALQLN 260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A+ RG GE AI D + AL+ +P L RG D++ A+ D
Sbjct: 261 PKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVNRGDAFVSKGDYDRAIGD 320
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ AY G+AL + GEY +A + +A++LD ++ A+ + ++
Sbjct: 321 YGHALQINPNYAFAYNGRGVALQNKGEYDRAIMDYDQALRLDPKYVFAFANRGDAFRSKG 380
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ A+ Q L + ++KAY+ RGL Q+ +AI+D + +DP
Sbjct: 381 EHDVAIADYNQALRLSPNYAKAYNGRGLSFQNKAQYNRAIEDYEQVIRLDP 431
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 124/255 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG +G+Y SAI ++Q L+ +P A RG + E + AI+D+ A+Q
Sbjct: 234 INRGDVFRIKGQYDSAIENYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNSALQI 293
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A RG A + G+ AI D AL+ PN A + RG+ +++ A+
Sbjct: 294 DPRYVVALVNRGDAFVSKGDYDRAIGDYGHALQINPNYAFAYNGRGVALQNKGEYDRAIM 353
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD + A+ G A S GE+ A + +A++L N+ +A+ +Q+
Sbjct: 354 DYDQALRLDPKYVFAFANRGDAFRSKGEHDVAIADYNQALRLSPNYAKAYNGRGLSFQNK 413
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
A +A+E +QV+ +D RF AY+ RG L G+ AI D L +DP +
Sbjct: 414 AQYNRAIEDYEQVIRLDPRFVAAYNNRGFALVSKGEPTLAIADYDKALLLDPKSATVYAN 473
Query: 625 RASCYHAIGEYREAV 639
R + GEY A+
Sbjct: 474 RGRAFQDKGEYDRAI 488
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 128/255 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G++ AI+ ++Q L+ P Y +A GRG + + + AI D+ + I+ +
Sbjct: 371 NRGDAFRSKGEHDVAIADYNQALRLSPNYAKAYNGRGLSFQNKAQYNRAIEDYEQVIRLD 430
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + GE AI D KAL +P SA + RG +++ A+ D
Sbjct: 431 PRFVAAYNNRGFALVSKGEPTLAIADYDKALLLDPKSATVYANRGRAFQDKGEYDRAIAD 490
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ ++ A L E+ +A ++ +A+QL+ ++ A+ +QD
Sbjct: 491 YDQALRLNPKDAIALNNRADILRLRHEHDRAIASYDQALQLNPKYVGAYNSRGLAFQDKG 550
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ Q L ++ R+ AY RG G+H +AI D + L ID +++ R
Sbjct: 551 EYDRAIANYDQALQLNPRYITAYINRGDAYRRKGEHARAISDYNQALQIDQNSVIAYNNR 610
Query: 626 ASCYHAIGEYREAVI 640
C+H GEY A+I
Sbjct: 611 GLCFHEQGEYDRAII 625
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 123/255 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A N+G Y AI+ +D L+ DP A RG A + E + AI+D+ +I+
Sbjct: 64 INRGFAFRNKGDYDRAIADYDHALQIDPNSVVAFNNRGDAFYHKGEYDRAIADYNRSIKL 123
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG A + E AI D ++AL +P RG +++ A+
Sbjct: 124 SSDKAAVYNNRGLAFFSKEEYDRAIADYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIA 183
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +++D + +Y GLA GEY +A + +A+ LD + A + ++
Sbjct: 184 DYNQVLQIDPRSVVSYNNRGLAFQGKGEYDRAVADYNQALTLDPGYTIALINRGDVFRIK 243
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ A+E Q L ++ + AY+ RG + + G++ +AI D +S L IDP + L
Sbjct: 244 GQYDSAIENYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVN 303
Query: 625 RASCYHAIGEYREAV 639
R + + G+Y A+
Sbjct: 304 RGDAFVSKGDYDRAI 318
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 118/231 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A ++G+Y AI+ +DQ L+ +P Y A I RG A + E AISD+ +A+Q +
Sbjct: 541 SRGLAFQDKGEYDRAIANYDQALQLNPRYITAYINRGDAYRRKGEHARAISDYNQALQID 600
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
++ A+ RG GE AI D +AL+ +P + RG K +++ A+ D
Sbjct: 601 QNSVIAYNNRGLCFHEQGEYDRAIIDYDRALQIDPMYSTGFINRGFAFHKKGEYDRAIAD 660
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++D + +AY G + GEY A + KAI + + ++ H +
Sbjct: 661 YDRALQIDPRSATAYNNRGFTFQNRGEYDLAIVDYDKAILIKPDLANSYYHRGTVLRLKG 720
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ E+++ L + + ++ R+++AY RGL H G+ +A+ D + + P
Sbjct: 721 DLERSVADLTEAIRLNPRYAEAYQDRGLTFHAKGEADRALADFAEAARLKP 771
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 122/255 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A V++G Y AI + L+ +P Y A GRG A + E + AI D+ +A++
Sbjct: 302 VNRGDAFVSKGDYDRAIGDYGHALQINPNYAFAYNGRGVALQNKGEYDRAIMDYDQALRL 361
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG A + GE AI D ++AL PN A + RG+ +N A+E
Sbjct: 362 DPKYVFAFANRGDAFRSKGEHDVAIADYNQALRLSPNYAKAYNGRGLSFQNKAQYNRAIE 421
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD +AY G AL S GE A + KA+ LD + + + +QD
Sbjct: 422 DYEQVIRLDPRFVAAYNNRGFALVSKGEPTLAIADYDKALLLDPKSATVYANRGRAFQDK 481
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ Q L ++ + + A + R +L +H +AI L ++P +
Sbjct: 482 GEYDRAIADYDQALRLNPKDAIALNNRADILRLRHEHDRAIASYDQALQLNPKYVGAYNS 541
Query: 625 RASCYHAIGEYREAV 639
R + GEY A+
Sbjct: 542 RGLAFQDKGEYDRAI 556
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 117/235 (49%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ +DQ L+ +P Y A RG A + E + AI+++ +A+Q NP A+ RG A
Sbjct: 521 AIASYDQALQLNPKYVGAYNSRGLAFQDKGEYDRAIANYDQALQLNPRYITAYINRGDAY 580
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
GE AI D ++AL+ + NS + RG+ + +++ A+ D +++D +
Sbjct: 581 RRKGEHARAISDYNQALQIDQNSVIAYNNRGLCFHEQGEYDRAIIDYDRALQIDPMYSTG 640
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G A GEY +A + +A+Q+D A+ + +Q+ + A+ + +
Sbjct: 641 FINRGFAFHKKGEYDRAIADYDRALQIDPRSATAYNNRGFTFQNRGEYDLAIVDYDKAIL 700
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
I + +Y+ RG +L G ++++ DL+ + ++P E R +HA GE
Sbjct: 701 IKPDLANSYYHRGTVLRLKGDLERSVADLTEAIRLNPRYAEAYQDRGLTFHAKGE 755
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 144/609 (23%), Positives = 248/609 (40%), Gaps = 90/609 (14%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA----------- 122
NR + E + I D ++AL+LDP L A + +G AF + G + A
Sbjct: 133 NRGLAFFSKEEYDRAIADYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIADYNQVLQID 192
Query: 123 -----------LSVWEKG-YEHALHQSADLKQFLELEELLTAAKQDRS----VTCEYDVS 166
L+ KG Y+ A+ AD Q L L+ T A +R + +YD
Sbjct: 193 PRSVVSYNNRGLAFQGKGEYDRAV---ADYNQALTLDPGYTIALINRGDVFRIKGQYD-- 247
Query: 167 NSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPD----LCN 222
S++ L N K S+ + N+ + R +++ S DP L N
Sbjct: 248 ---SAIENYNQALQLNPK-SKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVN 303
Query: 223 -GRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDF 281
G + +KG + G + +++ N+ + +G A ++ E +R D +
Sbjct: 304 RGDAFVSKGDYDRAIGDYGHAL-----QINPNYAFAYNGRGV--ALQNKGEYDRAIMD-Y 355
Query: 282 DIC---NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKS 338
D + A N ++ G HDV A N + S +Y+K+
Sbjct: 356 DQALRLDPKYVFAFANRGDAFRSKGEHDVA------IADYNQALRLSPNYAKAY------ 403
Query: 339 SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL-----SRGIAQVN 393
+ LSF+ N+A+ N+ + I +D R +RG A V+
Sbjct: 404 -----NGRGLSFQ--------NKAQYNRAIE----DYEQVIRLDPRFVAAYNNRGFALVS 446
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ--RELEAAISDFTEAIQSNPSAGEA 451
+G+ AI+ +D+ L DP RG RAFQ E + AI+D+ +A++ NP A
Sbjct: 447 KGEPTLAIADYDKALLLDPKSATVYANRG--RAFQDKGEYDRAIADYDQALRLNPKDAIA 504
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
R E AI +AL+ P + RG+ +++ A+ + ++
Sbjct: 505 LNNRADILRLRHEHDRAIASYDQALQLNPKYVGAYNSRGLAFQDKGEYDRAIANYDQALQ 564
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+ +AY G A GE+ +A + +A+Q+D+N + A+ + + + ++A+
Sbjct: 565 LNPRYITAYINRGDAYRRKGEHARAISDYNQALQIDQNSVIAYNNRGLCFHEQGEYDRAI 624
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+ L ID +S + RG H G++ +AI D L IDP + R +
Sbjct: 625 IDYDRALQIDPMYSTGFINRGFAFHKKGEYDRAIADYDRALQIDPRSATAYNNRGFTFQN 684
Query: 632 IGEYREAVI 640
GEY A++
Sbjct: 685 RGEYDLAIV 693
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 86/174 (49%), Gaps = 6/174 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G+Y AI +D+ L+ DPMY I RG A + E + AI+D+ A+Q +
Sbjct: 609 NRGLCFHEQGEYDRAIIDYDRALQIDPMYSTGFINRGFAFHKKGEYDRAIADYDRALQID 668
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A+ RG GE AI D KA+ +P+ A+ + RG V D +V D
Sbjct: 669 PRSATAYNNRGFTFQNRGEYDLAIVDYDKAILIKPDLANSYYHRGTVLRLKGDLERSVAD 728
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKK-----AEEAHLKA-IQLDRNFLEA 553
L+ ++L+ AY GL + GE + AE A LK + D FL A
Sbjct: 729 LTEAIRLNPRYAEAYQDRGLTFHAKGEADRALADFAEAARLKPEFENDPAFLAA 782
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A +G+Y AI+ +D+ L+ DP A RG + E + AI D+ +AI
Sbjct: 642 INRGFAFHKKGEYDRAIADYDRALQIDPRSATAYNNRGFTFQNRGEYDLAIVDYDKAILI 701
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P ++ RG G+ ++ DL++A+ P A+ +RG+ + + A+
Sbjct: 702 KPDLANSYYHRGTVLRLKGDLERSVADLTEAIRLNPRYAEAYQDRGLTFHAKGEADRALA 761
Query: 505 DLSACVKLDKE 515
D + +L E
Sbjct: 762 DFAEAARLKPE 772
>gi|307111954|gb|EFN60188.1| hypothetical protein CHLNCDRAFT_133703 [Chlorella variabilis]
Length = 1021
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 128/266 (48%), Gaps = 18/266 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ + VN+G A S+ D +L P A RGTARA EL A+ DF+ AIQ
Sbjct: 266 LALAVQLVNDGSCREAASLLDLLLYHHPGNVGAFAARGTARALLGELSGAVEDFSAAIQL 325
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS---ADILHERGIVNFKFKDFNA 501
PS + +KRR QA AALGE A D+ A+ P++ A+ + G ++ K KD+
Sbjct: 326 EPSFADFYKRRSQALAALGEDERAAADVQSAISLSPDAAAKAECHEDLGRLHQKAKDYRR 385
Query: 502 AVEDLSACVKLDKENK--SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A ++ L T LGL I Y+ A++LD + W +L
Sbjct: 386 AEQEFRVAASLAPAGPRLELLTALGLCQEGIATYE-------AALKLDATSKDLWLNLGM 438
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL---HGLGQHKKAIKDLSSGLGI-- 614
++L E+A + L++ + + A H LL GLG H A+++L+ G+
Sbjct: 439 ACKELCWVERAEQALRKAARLAGKGGTAVHAYRLLAQMKQGLGDHLGAVRELNRGIAATD 498
Query: 615 -DPSNIECLYLRASCYHAIGEYREAV 639
IE +LR +C+HA+G +R+AV
Sbjct: 499 KQSQRIELQFLRGACHHAVGLHRQAV 524
>gi|145537418|ref|XP_001454423.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422183|emb|CAK87026.1| unnamed protein product [Paramecium tetraurelia]
Length = 537
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 129/259 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD ++GIA + +Y AI +++ + P Y +A +G + AI + E
Sbjct: 215 VDAWNNKGIALDDLNQYEEAIECYNEAISISPKYVDAWYNKGITLGNLNQYNEAIECYNE 274
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP EAW +G L + EAI+ ++A+ P + +G V +N
Sbjct: 275 AISINPKYAEAWNYKGITLGNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQYN 334
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+E + + ++ + A+ G+AL ++ +Y++A + + +AI ++ F EAW +
Sbjct: 335 EAIECYNEAISINPKYAEAWNNKGIALRNLNQYEEAFKCYNEAISINPKFAEAWYNKGFT 394
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+L ++A+EC + + I+ +++ A++ +G+ L L Q+++AI+ + + I+P E
Sbjct: 395 LNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNLNQYEEAIECYNEAISINPKYAE 454
Query: 621 CLYLRASCYHAIGEYREAV 639
+ + +Y EA+
Sbjct: 455 AWNDKGIALRNLNQYEEAI 473
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 129/259 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD ++GI N +Y AI +++ + +P Y EA +G ++ E AI + E
Sbjct: 249 VDAWYNKGITLGNLNQYNEAIECYNEAISINPKYAEAWNYKGITLGNLQQYEEAIECYNE 308
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP W +G L + EAI+ ++A+ P A+ + +GI +
Sbjct: 309 AISINPKVDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAEAWNNKGIALRNLNQYE 368
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A + + + ++ + A+ G L+++ ++ +A E +AI ++ + AW +
Sbjct: 369 EAFKCYNEAISINPKFAEAWYNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNKGIT 428
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
++L E+A+EC + + I+ ++++A++ +G+ L L Q+++AIK + + I+P E
Sbjct: 429 LRNLNQYEEAIECYNEAISINPKYAEAWNDKGIALRNLNQYEEAIKCYNEAISINPKFAE 488
Query: 621 CLYLRASCYHAIGEYREAV 639
Y + + + +Y EA+
Sbjct: 489 AWYNKGITLNNLNQYEEAI 507
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 127/246 (51%), Gaps = 5/246 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++IS++ + + +GI N +Y AI +++ + +P +G +
Sbjct: 273 NEAISINPKYAEAWNYKGITLGNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQ 332
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
AI + EAI NP EAW +G A L + EA + ++A+ P A+ + +G
Sbjct: 333 YNEAIECYNEAISINPKYAEAWNNKGIALRNLNQYEEAFKCYNEAISINPKFAEAWYNKG 392
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
F+ A+E + + ++ + SA+ G+ L ++ +Y++A E + +AI ++ +
Sbjct: 393 FTLNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNLNQYEEAIECYNEAISINPKY 452
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
EAW ++L E+A++C + + I+ +F++A++ +G+ L+ L Q+++AIK +
Sbjct: 453 AEAWNDKGIALRNLNQYEEAIKCYNEAISINPKFAEAWYNKGITLNNLNQYEEAIKCYNE 512
Query: 611 GLGIDP 616
+ I+P
Sbjct: 513 AISINP 518
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 126/253 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA N +Y AI +++ + +P A +G + E AI + EAI NP
Sbjct: 153 KGIALRNLKQYEEAIKCYNEAIYINPKDASAWQNKGITLYNLNQNEEAIECYNEAISINP 212
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW +G A L + EAI+ ++A+ P D + +GI +N A+E
Sbjct: 213 KYVDAWNNKGIALDDLNQYEEAIECYNEAISISPKYVDAWYNKGITLGNLNQYNEAIECY 272
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ + A+ Y G+ L ++ +Y++A E + +AI ++ W + +L
Sbjct: 273 NEAISINPKYAEAWNYKGITLGNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQ 332
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+EC + + I+ ++++A++ +G+ L L Q+++A K + + I+P E Y +
Sbjct: 333 YNEAIECYNEAISINPKYAEAWNNKGIALRNLNQYEEAFKCYNEAISINPKFAEAWYNKG 392
Query: 627 SCYHAIGEYREAV 639
+ + ++ EA+
Sbjct: 393 FTLNNLNQFDEAI 405
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 19/275 (6%)
Query: 377 KSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++IS++F+ + +G+ V Y AI +++ + +P+ A +G A ++
Sbjct: 70 EAISINFKSDAAWIGKGLVLVELNHYEQAIKCYNEAISFNPLSVNAWNNKGYALNDLKQC 129
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI + EAI NP AW +G A L + EAI+ ++A+ P A +GI
Sbjct: 130 EEAIECYNEAIFINPKYISAWNGKGIALRNLKQYEEAIKCYNEAIYINPKDASAWQNKGI 189
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A+E + + ++ + A+ G+AL + +Y++A E + +AI + ++
Sbjct: 190 TLYNLNQNEEAIECYNEAISINPKYVDAWNNKGIALDDLNQYEEAIECYNEAISISPKYV 249
Query: 552 EAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+AW G+L Q+ +A+EC + + I+ ++++A++ +G+ L L Q+++A
Sbjct: 250 DAWYNKGITLGNLNQY-------NEAIECYNEAISINPKYAEAWNYKGITLGNLQQYEEA 302
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I+ + + I+P + + + + +Y EA+
Sbjct: 303 IECYNEAISINPKVDYVWFNKGNVLGNLNQYNEAI 337
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 125/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI N + AI +++ + +P Y +A +G A + E AI + EAI +
Sbjct: 186 NKGITLYNLNQNEEAIECYNEAISINPKYVDAWNNKGIALDDLNQYEEAIECYNEAISIS 245
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G L + EAI+ ++A+ P A+ + +GI + + A+E
Sbjct: 246 PKYVDAWYNKGITLGNLNQYNEAIECYNEAISINPKYAEAWNYKGITLGNLQQYEEAIEC 305
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ + + G L ++ +Y +A E + +AI ++ + EAW + ++L
Sbjct: 306 YNEAISINPKVDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAEAWNNKGIALRNLN 365
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A +C + + I+ +F++A++ +G L+ L Q +AI+ + + I+P Y +
Sbjct: 366 QYEEAFKCYNEAISINPKFAEAWYNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNK 425
Query: 626 ASCYHAIGEYREAV 639
+ +Y EA+
Sbjct: 426 GITLRNLNQYEEAI 439
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 126/271 (46%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +SV+ ++G A + + AI +++ + +P Y A G+G A
Sbjct: 101 CYNEAISFNPLSVNAWNNKGYALNDLKQCEEAIECYNEAIFINPKYISAWNGKGIALRNL 160
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ E AI + EAI NP AW+ +G L ++ EAI+ ++A+ P D +
Sbjct: 161 KQYEEAIKCYNEAIYINPKDASAWQNKGITLYNLNQNEEAIECYNEAISINPKYVDAWNN 220
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+GI + A+E + + + + A+ G+ L ++ +Y +A E + +AI ++
Sbjct: 221 KGIALDDLNQYEEAIECYNEAISISPKYVDAWYNKGITLGNLNQYNEAIECYNEAISINP 280
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ EAW + +L E+A+EC + + I+ + + +G +L L Q+ +AI+
Sbjct: 281 KYAEAWNYKGITLGNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQYNEAIECY 340
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + I+P E + + +Y EA
Sbjct: 341 NEAISINPKYAEAWNNKGIALRNLNQYEEAF 371
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 133/268 (49%), Gaps = 4/268 (1%)
Query: 376 SKSISVD----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
S+ IS++ +G A + +Y AI ++ + +P Y +AL+ +G A +
Sbjct: 2 SQPISINPQEKVWYDKGTALADLNQYQEAIQCLNEAISINPKYEQALVAKGNALRSLTQY 61
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ A + EAI N + AW +G L +AI+ ++A+ F P S + + +G
Sbjct: 62 QDASKCYDEAISINFKSDAAWIGKGLVLVELNHYEQAIKCYNEAISFNPLSVNAWNNKGY 121
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K A+E + + ++ + SA+ G+AL ++ +Y++A + + +AI ++
Sbjct: 122 ALNDLKQCEEAIECYNEAIFINPKYISAWNGKGIALRNLKQYEEAIKCYNEAIYINPKDA 181
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
AW + +L +E+A+EC + + I+ ++ A++ +G+ L L Q+++AI+ +
Sbjct: 182 SAWQNKGITLYNLNQNEEAIECYNEAISINPKYVDAWNNKGIALDDLNQYEEAIECYNEA 241
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ I P ++ Y + + +Y EA+
Sbjct: 242 ISISPKYVDAWYNKGITLGNLNQYNEAI 269
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 106/216 (49%), Gaps = 1/216 (0%)
Query: 381 VDF-RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
VD+ ++G N +Y AI +++ + +P Y EA +G A + E A +
Sbjct: 316 VDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAEAWNNKGIALRNLNQYEEAFKCYN 375
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI NP EAW +G L + EAI+ ++A+ P A + +GI +
Sbjct: 376 EAISINPKFAEAWYNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNLNQY 435
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E + + ++ + A+ G+AL ++ +Y++A + + +AI ++ F EAW +
Sbjct: 436 EEAIECYNEAISINPKYAEAWNDKGIALRNLNQYEEAIKCYNEAISINPKFAEAWYNKGI 495
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
+L E+A++C + + I+ + A++ +G +
Sbjct: 496 TLNNLNQYEEAIKCYNEAISINPKVDYAWYNQGQFI 531
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 361 EAKRNKKFCVTRISK--------SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQI 407
EA NK F + +++ +++IS++ + + +GI N +Y AI +++
Sbjct: 386 EAWYNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNLNQYEEAIECYNEA 445
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
+ +P Y EA +G A + E AI + EAI NP EAW +G L + E
Sbjct: 446 ISINPKYAEAWNDKGIALRNLNQYEEAIKCYNEAISINPKFAEAWYNKGITLNNLNQYEE 505
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFK 497
AI+ ++A+ P + +G FK K
Sbjct: 506 AIKCYNEAISINPKVDYAWYNQGQFIFKSK 535
>gi|386002707|ref|YP_005921006.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357210763|gb|AET65383.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 949
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 6/258 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD + G A G Y A+ +D + P P RG LE A+ F E
Sbjct: 501 VDAWVGMGDAFAAAGIYDRAVEAYDGAIALYPGDPAVWYNRGLLLYNASRLEEAVESFDE 560
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I+ +PS W+ +G A ALG S EAI +ALE P+ + + RG+V F +
Sbjct: 561 VIEIDPSYEGVWRLKGLALYALGRSDEAIDCYDEALEISPSEVSLWYNRGVVLFSLGRYG 620
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+E ++LD+ K G AL S+G Y +A E + K +++ +AW
Sbjct: 621 EAIESYDRVIELDRYEK------GEALYSLGRYDEAIECYEKVLEVSPLEAKAWYQKGLA 674
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+Q L + E++ EC +V+ ID + + RG +L LG + A+ L DP ++E
Sbjct: 675 HQILGDYERSAECYDRVVEIDPGYEEVILRRGFVLLRLGDYDGALASYDLALQEDPDDLE 734
Query: 621 CLYLRASCYHAIGEYREA 638
R A+G + EA
Sbjct: 735 AARGRGEALLALGRFEEA 752
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 34/305 (11%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R + S D +RG+A + G+Y A+ +D+ + DP + +G A
Sbjct: 115 CYDRAMEFNSTGPDLWRARGLALYSLGRYEEAVRSYDEAIVFDPAQGDLWYQKGLALCGL 174
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E AI + AI + +W + A +LG + EAI +A++ +P+ D+ +
Sbjct: 175 GRYEKAIESYDFAITIDGDDAASWHGKALALYSLGRAEEAIDCYDRAIDIDPSLTDVWYN 234
Query: 489 RGIVNF-------KFKDFNAAVED---------------------------LSACVKLDK 514
+GI + FK ++AAVE + +D
Sbjct: 235 KGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSLGRVEEAIDCYDRAIDIDP 294
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G AL ++G + +A+E + +A+++D + W +L Q L E+ALE
Sbjct: 295 SLVAVWNNKGNALYALGRFDEAQECYRRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAY 354
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+++ ID S+A++ RGL L+ LG++ +A L IDP N + Y +A ++G
Sbjct: 355 DRLIEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGR 414
Query: 635 YREAV 639
Y EA+
Sbjct: 415 YEEAL 419
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 120/256 (46%), Gaps = 2/256 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L + I + Y A+ ++ L DP YP+A +G + L+ A+S F +++
Sbjct: 29 LGKAIGFYSNESYDLALLYVNKSLDIDPAYPDAWSLKGYILSDLGRLDEALSCFNRSLEI 88
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P W +G LG EAI +A+EF D+ RG+ + + AV
Sbjct: 89 DPQDPHIWYSKGFVLYGLGIYDEAIDCYDRAMEFNSTGPDLWRARGLALYSLGRYEEAVR 148
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQD 563
+ D + GLAL +G Y+KA E++ AI +D + +W G Y
Sbjct: 149 SYDEAIVFDPAQGDLWYQKGLALCGLGRYEKAIESYDFAITIDGDDAASWHGKALALYS- 207
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L +E+A++C + + ID + ++ +G+ L+ LG+H++A K + + IDP +
Sbjct: 208 LGRAEEAIDCYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWF 267
Query: 624 LRASCYHAIGEYREAV 639
+ ++++G EA+
Sbjct: 268 NKGLAFYSLGRVEEAI 283
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 134/279 (48%), Gaps = 5/279 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
N+ + + + +KS+ +D +G + G+ A+S F++ L+ DP P
Sbjct: 38 NESYDLALLYVNKSLDIDPAYPDAWSLKGYILSDLGRLDEALSCFNRSLEIDPQDPHIWY 97
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
+G + AI + A++ N + + W+ RG A +LG EA++ +A+ F+
Sbjct: 98 SKGFVLYGLGIYDEAIDCYDRAMEFNSTGPDLWRARGLALYSLGRYEEAVRSYDEAIVFD 157
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P D+ +++G+ + A+E + +D ++ +++ LAL S+G ++A +
Sbjct: 158 PAQGDLWYQKGLALCGLGRYEKAIESYDFAITIDGDDAASWHGKALALYSLGRAEEAIDC 217
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +AI +D + + W + L E+A +C + ID + A+ +GL + LG
Sbjct: 218 YDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSLG 277
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ ++AI + IDPS + + + +A+G + EA
Sbjct: 278 RVEEAIDCYDRAIDIDPSLVAVWNNKGNALYALGRFDEA 316
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 119/270 (44%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R D ++GIA G++ A +D ++ DP+Y A +G A
Sbjct: 217 CYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSL 276
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+E AI + AI +PS W +G A ALG EA + +A+E +P ++ +
Sbjct: 277 GRVEEAIDCYDRAIDIDPSLVAVWNNKGNALYALGRFDEAQECYRRAVEIDPEYSNPWYN 336
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G+V + A+E +++D A+ GLAL S+G Y +A + + +++D
Sbjct: 337 LGVVLQRLGRGEEALEAYDRLIEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDP 396
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ W L E+AL+C + L R + + R +L+ L ++ +++
Sbjct: 397 ENGDVWYDKALALGSLGRYEEALDCYDEALEAGPRRPEVLNNRCNILYSLERYNESVGCY 456
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+GIDP Y R + +G Y EA
Sbjct: 457 GDVIGIDPGYENAWYNRGVALYTLGRYEEA 486
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 141/321 (43%), Gaps = 44/321 (13%)
Query: 363 KRNKKFCVTRISKS-----KSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDP 412
K N + + R ++ +++ +D S G+ G+ A+ +D++++ DP
Sbjct: 303 KGNALYALGRFDEAQECYRRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAYDRLIEIDP 362
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
EA RG A + A + ++ +P G+ W + A +LG EA+
Sbjct: 363 NLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGRYEEALDCY 422
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+ALE P ++L+ R + + + +N +V + +D ++A+ G+AL ++G
Sbjct: 423 DEALEAGPRRPEVLNNRCNILYSLERYNESVGCYGDVIGIDPGYENAWYNRGVALYTLGR 482
Query: 533 YKKAEEAHLKAIQLDRNFLEAW---------------------GHLTQFYQD-------- 563
Y++A ++ +A L+ + ++AW G + + D
Sbjct: 483 YEEASASYGEAAALNGSRVDAWVGMGDAFAAAGIYDRAVEAYDGAIALYPGDPAVWYNRG 542
Query: 564 --LANS---EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
L N+ E+A+E +V+ ID + + L+GL L+ LG+ +AI L I PS
Sbjct: 543 LLLYNASRLEEAVESFDEVIEIDPSYEGVWRLKGLALYALGRSDEAIDCYDEALEISPSE 602
Query: 619 IECLYLRASCYHAIGEYREAV 639
+ Y R ++G Y EA+
Sbjct: 603 VSLWYNRGVVLFSLGRYGEAI 623
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 118/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+ +A + G+ AI +D+ + DP + +G A E A + A++ +
Sbjct: 200 GKALALYSLGRAEEAIDCYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEID 259
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G A +LG EAI +A++ +P+ + + +G + F+ A E
Sbjct: 260 PLYHPAWFNKGLAFYSLGRVEEAIDCYDRAIDIDPSLVAVWNNKGNALYALGRFDEAQEC 319
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V++D E + + LG+ L +G ++A EA+ + I++D N EAW + L
Sbjct: 320 YRRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAYDRLIEIDPNLSEAWYNRGLALYSLG 379
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A C +VL ID ++ + L L LG++++A+ L P E L R
Sbjct: 380 RYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGRYEEALDCYDEALEAGPRRPEVLNNR 439
Query: 626 ASCYHAIGEYREAV 639
+ +++ Y E+V
Sbjct: 440 CNILYSLERYNESV 453
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 107/240 (44%), Gaps = 6/240 (2%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y ++ + ++ DP Y A RG A E A + + EA N S +AW
Sbjct: 448 RYNESVGCYGDVIGIDPGYENAWYNRGVALYTLGRYEEASASYGEAAALNGSRVDAWVGM 507
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A AA G A++ A+ P + + RG++ + AVE +++D
Sbjct: 508 GDAFAAAGIYDRAVEAYDGAIALYPGDPAVWYNRGLLLYNASRLEEAVESFDEVIEIDPS 567
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ + GLAL ++G +A + + +A+++ + + W + L +A+E
Sbjct: 568 YEGVWRLKGLALYALGRSDEAIDCYDEALEISPSEVSLWYNRGVVLFSLGRYGEAIESYD 627
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+V+ +D+ + +G L+ LG++ +AI+ L + P + Y + + +G+Y
Sbjct: 628 RVIELDR------YEKGEALYSLGRYDEAIECYEKVLEVSPLEAKAWYQKGLAHQILGDY 681
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 104/252 (41%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C ++ + + +G+A G Y + +D++++ DP Y E ++ RG
Sbjct: 653 CYEKVLEVSPLEAKAWYQKGLAHQILGDYERSAECYDRVVEIDPGYEEVILRRGFVLLRL 712
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A++ + A+Q +P EA + RG+A ALG EA + L H
Sbjct: 713 GDYDGALASYDLALQEDPDDLEAARGRGEALLALGRFEEASATFDRILANASEDGGAWHG 772
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG+ ++ A++ + ++ + + G L G + A + +AI LD+
Sbjct: 773 RGLALAGLLRYDEAIDSYDRAIAINSSDNLLWIGRGGVLEEAGRLEDAVASFDRAIALDQ 832
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
EAW + E A + + +D +A RG + G+ ++AI
Sbjct: 833 EDPEAWSMRGRALMKAGRLEDAAASFDRAIALDPSSGEAQRGRGSVFEAQGRAEEAIGCY 892
Query: 609 SSGLGIDPSNIE 620
+ + +DP E
Sbjct: 893 EAAIALDPPTPE 904
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 116/266 (43%), Gaps = 1/266 (0%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
S + I +D R +G A + G+Y AI ++++L+ P+ +A +G A + E
Sbjct: 625 SYDRVIELD-RYEKGEALYSLGRYDEAIECYEKVLEVSPLEAKAWYQKGLAHQILGDYER 683
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+ + ++ +P E RRG LG+ A+ AL+ +P+ + RG
Sbjct: 684 SAECYDRVVEIDPGYEEVILRRGFVLLRLGDYDGALASYDLALQEDPDDLEAARGRGEAL 743
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F A + E+ A+ GLAL+ + Y +A +++ +AI ++ +
Sbjct: 744 LALGRFEEASATFDRILANASEDGGAWHGRGLALAGLLRYDEAIDSYDRAIAINSSDNLL 803
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
W ++ E A+ + + +D+ +A+ +RG L G+ + A +
Sbjct: 804 WIGRGGVLEEAGRLEDAVASFDRAIALDQEDPEAWSMRGRALMKAGRLEDAAASFDRAIA 863
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
+DPS+ E R S + A G EA+
Sbjct: 864 LDPSSGEAQRGRGSVFEAQGRAEEAI 889
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 35/206 (16%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
L + K I D + +D A++ + L SL +AI D + + D+
Sbjct: 174 LGRYEKAIESYDFAITIDGDDAASWHGKA--LALYSLGRAEEAIDCYDRAIDIDPSLTDV 231
Query: 73 C-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL-------- 123
N+ L H+ + D A+++DP A+ KG AF +LGR EEA+
Sbjct: 232 WYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSLGRVEEAIDCYDRAID 291
Query: 124 ------SVW-EKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTV-- 174
+VW KG +AL+ L +F E +E R+V + + SN +L V
Sbjct: 292 IDPSLVAVWNNKG--NALYA---LGRFDEAQECYR-----RAVEIDPEYSNPWYNLGVVL 341
Query: 175 -----SESGLNANDKMSETSENHNKS 195
E L A D++ E N +++
Sbjct: 342 QRLGRGEEALEAYDRLIEIDPNLSEA 367
>gi|300871059|ref|YP_003785931.1| hypothetical protein BP951000_1446 [Brachyspira pilosicoli 95/1000]
gi|300688759|gb|ADK31430.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
Length = 653
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 119/223 (53%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A G + ++ + AI D+ +AI+ NP+ A+ RG A+ LG+ EAI+D K++
Sbjct: 342 AYYNIGIVKNNLKQYKEAIEDYDKAIELNPNDYMAYNNRGVAKMNLGQYKEAIKDFDKSI 401
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E NS++ + RG V A+ED ++L+ N SAY G++ S +G YK+A
Sbjct: 402 ELSQNSSETYNNRGNVKANLGLNKEAIEDYDKAIELNPNNSSAYNNRGISKSDLGLYKEA 461
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ KAI+L+ N EA+ + DL E+A++ + + ++ +S+AY+ RG
Sbjct: 462 IKDFDKAIELNPNSSEAYSNRGNAKSDLNQYEEAIKDYNKAIELNPNYSEAYNNRGNAKT 521
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L +K+A++D + + ++P+N E R + +G EA+
Sbjct: 522 NLSLYKEAVEDYNKAIELNPNNSEVYNNRGTAKANLGNNEEAI 564
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 130/236 (55%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + N +Y AI +D+ ++ +P A RG A+ + + AI DF ++I+ + +
Sbjct: 347 GIVKNNLKQYKEAIEDYDKAIELNPNDYMAYNNRGVAKMNLGQYKEAIKDFDKSIELSQN 406
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ E + RG +A LG + EAI+D KA+E PN++ + RGI + A++D
Sbjct: 407 SSETYNNRGNVKANLGLNKEAIEDYDKAIELNPNNSSAYNNRGISKSDLGLYKEAIKDFD 466
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ + AY+ G A S + +Y++A + + KAI+L+ N+ EA+ + +L+
Sbjct: 467 KAIELNPNSSEAYSNRGNAKSDLNQYEEAIKDYNKAIELNPNYSEAYNNRGNAKTNLSLY 526
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
++A+E + + ++ S+ Y+ RG LG +++AIKD + + ++ +N + +
Sbjct: 527 KEAVEDYNKAIELNPNNSEVYNNRGTAKANLGNNEEAIKDYNRSIELNSNNAQAYF 582
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 117/222 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A++N G+Y AI FD+ ++ E RG +A + AI D+ +AI+ N
Sbjct: 379 NRGVAKMNLGQYKEAIKDFDKSIELSQNSSETYNNRGNVKANLGLNKEAIEDYDKAIELN 438
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG +++ LG EAI+D KA+E PNS++ RG + A++D
Sbjct: 439 PNNSSAYNNRGISKSDLGLYKEAIKDFDKAIELNPNSSEAYSNRGNAKSDLNQYEEAIKD 498
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ AY G A +++ YK+A E + KAI+L+ N E + + +L
Sbjct: 499 YNKAIELNPNYSEAYNNRGNAKTNLSLYKEAVEDYNKAIELNPNNSEVYNNRGTAKANLG 558
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
N+E+A++ + + ++ ++AY L L + K+ K+
Sbjct: 559 NNEEAIKDYNRSIELNSNNAQAYFNMVLAKQLLANNTKSKKE 600
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 94/170 (55%), Gaps = 1/170 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI++ + G Y AI FD+ ++ +P EA RG A++ + E AI D+ +AI+ N
Sbjct: 447 NRGISKSDLGLYKEAIKDFDKAIELNPNSSEAYSNRGNAKSDLNQYEEAIKDYNKAIELN 506
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG A+ L EA++D +KA+E PN++++ + RG + A++D
Sbjct: 507 PNYSEAYNNRGNAKTNLSLYKEAVEDYNKAIELNPNNSEVYNNRGTAKANLGNNEEAIKD 566
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN-FLEAW 554
+ ++L+ N AY + LA + K+++ K I+ N F+E +
Sbjct: 567 YNRSIELNSNNAQAYFNMVLAKQLLANNTKSKKEKDKLIEEAYNDFIEGY 616
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR S L L+K I+D DKA++L+P +AY +G A S L + EEA+ + K E
Sbjct: 447 NRGISKSDLGLYKEAIKDFDKAIELNPNSSEAYSNRGNAKSDLNQYEEAIKDYNKAIE 504
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI L+ +++Y NR + L L+K + D +KA++L+P + Y
Sbjct: 495 AIKDYNKAIE-LNPNYSEAY-----NNRGNAKTNLSLYKEAVEDYNKAIELNPNNSEVYN 548
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G A + LG EEA+ + + E
Sbjct: 549 NRGTAKANLGNNEEAIKDYNRSIE 572
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR + L L+K I D DKA++L+P AY +G + S LG +EA+ ++K E
Sbjct: 413 NRGNVKANLGLNKEAIEDYDKAIELNPNNSSAYNNRGISKSDLGLYKEAIKDFDKAIE 470
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N + L+ +K I D DKA++L+P AY +G A LG+ +EA+ ++K E
Sbjct: 345 NIGIVKNNLKQYKEAIEDYDKAIELNPNDYMAYNNRGVAKMNLGQYKEAIKDFDKSIE 402
>gi|428317098|ref|YP_007114980.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
7112]
gi|428240778|gb|AFZ06564.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
7112]
Length = 732
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 126/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+++ G A+ F Q+++ +P EA RG A + AI D+T+AI+ +
Sbjct: 415 NRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIEDYTQAIRLS 474
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG AR+A G+ A+ D ++AL+ P A + + RG F D+ A+ED
Sbjct: 475 PNDAKAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNLADYQGAMED 534
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + AYT A ++ Y KA + I+LD A+ + Y +L
Sbjct: 535 YTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLDPKDEAAYNNRCVAYLNLK 594
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+KA E + ++ KAY RGL G + A++D + + ++PS+ R
Sbjct: 595 QFQKASEDCSLTIGLNGNNPKAYSNRGLARSASGDKQGALEDFTQAIRLNPSDAVAYSNR 654
Query: 626 ASCYHAIGEYREAV 639
+ Y + Y AV
Sbjct: 655 GTIYSELKNYPLAV 668
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 128/253 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R A+ + G AI + Q +K +P + +AL RG AR + A+ DFT+ ++ NP
Sbjct: 382 RANARYDTGATEQAIEDYTQAIKVNPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNP 441
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S GEA+ +RG A LG+ AI+D ++A+ PN A RG+ D A+ D
Sbjct: 442 SDGEAYSQRGLAYYDLGDYRTAIEDYTQAIRLSPNDAKAYSNRGLARSAAGDKTGAMADF 501
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +++ + Y G A ++ +Y+ A E + KAI+L + +A+ + Y +LA
Sbjct: 502 TQALQISPKQAGVYYSRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLAT 561
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+KA+ + + +D + AY+ R + L Q +KA +D S +G++ +N + R
Sbjct: 562 YDKAIADCTEGIRLDPKDEAAYNNRCVAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRG 621
Query: 627 SCYHAIGEYREAV 639
A G+ + A+
Sbjct: 622 LARSASGDKQGAL 634
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 115/230 (50%)
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
++P + + RG +A Q + AI+D+T+AI N S E++ +R AR G + +AI
Sbjct: 337 QNPARSKEWLARGVTKAQQGDTTGAIADYTQAIALNASDAESYYKRANARYDTGATEQAI 396
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
+D ++A++ P+ L+ RG+ D AVED + V+L+ + AY+ GLA
Sbjct: 397 EDYTQAIKVNPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYD 456
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+G+Y+ A E + +AI+L N +A+ + + A+ Q L I + + Y+
Sbjct: 457 LGDYRTAIEDYTQAIRLSPNDAKAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYY 516
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG L ++ A++D + + + P + R S Y + Y +A+
Sbjct: 517 SRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAI 566
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ + +G AI+ + Q + + E+ R AR E AI D+T+AI+
Sbjct: 346 LARGVTKAQQGDTTGAIADYTQAIALNASDAESYYKRANARYDTGATEQAIEDYTQAIKV 405
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NPS +A RG AR +G+ A++D ++ + P+ + +RG+ + D+ A+E
Sbjct: 406 NPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIE 465
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L + AY+ GLA S+ G+ A +A+Q+ + + +L
Sbjct: 466 DYTQAIRLSPNDAKAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNL 525
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
A+ + A+E + + + + AY R L + KAI D + G+ +DP +
Sbjct: 526 ADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLDPKDEAAYNN 585
Query: 625 RASCYHAIGEYREA 638
R Y + ++++A
Sbjct: 586 RCVAYLNLKQFQKA 599
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 122/240 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + G Y +AI + Q ++ P +A RG AR+ + A++DFT+A+Q +P
Sbjct: 450 RGLAYYDLGDYRTAIEDYTQAIRLSPNDAKAYSNRGLARSAAGDKTGAMADFTQALQISP 509
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG+AR L + A++D +KA+E +P+ AD R ++ A+ D
Sbjct: 510 KQAGVYYSRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAIADC 569
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD ++++AY +A ++ +++KA E I L+ N +A+ + +
Sbjct: 570 TEGIRLDPKDEAAYNNRCVAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRGLARSASGD 629
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ ALE Q + ++ + AY RG + L + A++D + L ++P+N Y R
Sbjct: 630 KQGALEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAHSLRLNPNNASAFYSRG 689
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G A++ F Q L+ P RG AR + + A+ D+T+AI+
Sbjct: 483 NRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNLADYQGAMEDYTKAIELQ 542
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ R A L +AI D ++ + +P + R + K F A ED
Sbjct: 543 PDLADAYTNRCSAYLNLATYDKAIADCTEGIRLDPKDEAAYNNRCVAYLNLKQFQKASED 602
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ N AY+ GLA S+ G+ + A E +AI+L+ + A+ + Y +L
Sbjct: 603 CSLTIGLNGNNPKAYSNRGLARSASGDKQGALEDFTQAIRLNPSDAVAYSNRGTIYSELK 662
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N A+E L ++ + A++ RGL+ L AI+D
Sbjct: 663 NYPLAVEDFAHSLRLNPNNASAFYSRGLVRRQLKDRTGAIEDF 705
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P+A RG AR+ + + A+ DFT+AI+ NPS A+ RG + L A++D +
Sbjct: 614 PKAYSNRGLARSASGDKQGALEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAH 673
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+L PN+A + RG+V + KD A+ED L
Sbjct: 674 SLRLNPNNASAFYSRGLVRRQLKDRTGAIEDFQKAATL 711
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A +N Y AI+ + ++ DP A R A ++ + A D + I N +
Sbjct: 555 AYLNLATYDKAIADCTEGIRLDPKDEAAYNNRCVAYLNLKQFQKASEDCSLTIGLNGNNP 614
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+A+ RG AR+A G+ A++D ++A+ P+ A RG + + K++ AVED +
Sbjct: 615 KAYSNRGLARSASGDKQGALEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAHS 674
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++L+ N SA+ GL + + A E KA L FLE
Sbjct: 675 LRLNPNNASAFYSRGLVRRQLKDRTGAIEDFQKAATL---FLE 714
>gi|441498582|ref|ZP_20980777.1| TPR repeat protein [Fulvivirga imtechensis AK7]
gi|441437688|gb|ELR71037.1| TPR repeat protein [Fulvivirga imtechensis AK7]
Length = 370
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 144/292 (49%), Gaps = 14/292 (4%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMY 414
LK N+ + + ++ +SK + RG A+ G + AI ++ L+ D Y
Sbjct: 29 LKSIENDQYKEAIELLNKVVESKPKDKEVYNKRGFARNQLGNFYGAIGDYNIALEIDSTY 88
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
+AL+ RG A+ + A+ D+ +AI+ P + +A+ R A+ L + A D SK
Sbjct: 89 ADALLNRGEAKFNLGDDYGALEDYDKAIKYEPKSAQAYTSRAFAKYNLEDLEGAYFDFSK 148
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+E +PN AD RG++ + +++ +A++D + + LD + Y Y +A +I + +
Sbjct: 149 AIEMDPNDADKYFNRGVIKAELEEYISAIDDYNKALSLDDSDPDIYNYRAVAKFNIDQVE 208
Query: 535 KAEEAHLKAIQLD-------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+A + + KAI++D N A L + LA+ +K++E +
Sbjct: 209 EAMKDYNKAIEMDTTDPIKYENRALAKSTLEDYEGALADYDKSIELFDED-------PDT 261
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y+LRG++ + L H+ AI+D S + +DP N RA AI +Y+ A+
Sbjct: 262 YNLRGVVKYNLENHEGAIEDYSKAIELDPYNPVYYDNRALSKVAIQDYKGAI 313
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 120/249 (48%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S D L+RG A+ N G A+ +D+ +K +P +A R A+ +LE A D
Sbjct: 86 STYADALLNRGEAKFNLGDDYGALEDYDKAIKYEPKSAQAYTSRAFAKYNLEDLEGAYFD 145
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F++AI+ +P+ + + RG +A L E + AI D +KAL + + DI + R + F
Sbjct: 146 FSKAIEMDPNDADKYFNRGVIKAELEEYISAIDDYNKALSLDDSDPDIYNYRAVAKFNID 205
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
A++D + +++D + Y LA S++ +Y+ A + K+I+L + +
Sbjct: 206 QVEEAMKDYNKAIEMDTTDPIKYENRALAKSTLEDYEGALADYDKSIELFDEDPDTYNLR 265
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+L N E A+E + + +D Y R L + +K AI+D S + + P+
Sbjct: 266 GVVKYNLENHEGAIEDYSKAIELDPYNPVYYDNRALSKVAIQDYKGAIRDYSYSIELFPT 325
Query: 618 NIECLYLRA 626
+ E + R
Sbjct: 326 DPETFHQRG 334
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 8/230 (3%)
Query: 317 SLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKS 376
+L D E Y K+ + KS+ + SR+ + + L+ F ++ +
Sbjct: 101 NLGDDYGALEDYDKAIKYEPKSAQAYTSRAFAKYNLEDLE--------GAYFDFSKAIEM 152
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
D +RG+ + +Y SAI +++ L D P+ R A+ ++E A+
Sbjct: 153 DPNDADKYFNRGVIKAELEEYISAIDDYNKALSLDDSDPDIYNYRAVAKFNIDQVEEAMK 212
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D+ +AI+ + + ++ R A++ L + A+ D K++E D + RG+V +
Sbjct: 213 DYNKAIEMDTTDPIKYENRALAKSTLEDYEGALADYDKSIELFDEDPDTYNLRGVVKYNL 272
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++ A+ED S ++LD N Y L+ +I +YK A + +I+L
Sbjct: 273 ENHEGAIEDYSKAIELDPYNPVYYDNRALSKVAIQDYKGAIRDYSYSIEL 322
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R +A+ N + A+ +++ ++ D P R A++ + E A++D+ ++I+
Sbjct: 197 RAVAKFNIDQVEEAMKDYNKAIEMDTTDPIKYENRALAKSTLEDYEGALADYDKSIELFD 256
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + RG + L AI+D SKA+E +P + R + +D+ A+ D
Sbjct: 257 EDPDTYNLRGVVKYNLENHEGAIEDYSKAIELDPYNPVYYDNRALSKVAIQDYKGAIRDY 316
Query: 507 SACVKLDKENKSAYTYLGLALSSIGE 532
S ++L + + GLA S G+
Sbjct: 317 SYSIELFPTDPETFHQRGLAKISKGD 342
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 14/194 (7%)
Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
+ Y+K+ D+ D R+ F D ++E + + + T K ++
Sbjct: 178 DDYNKALSLDDSDPDIYNYRAVAKFNIDQVEEAMKDYNKAIEMDTTDPIKYEN------- 230
Query: 386 SRGIAQVNEGKYASAISIFD---QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
R +A+ Y A++ +D ++ EDP + RG + E AI D+++AI
Sbjct: 231 -RALAKSTLEDYEGALADYDKSIELFDEDP---DTYNLRGVVKYNLENHEGAIEDYSKAI 286
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ +P + R ++ A+ + AI+D S ++E P + H+RG+ D
Sbjct: 287 ELDPYNPVYYDNRALSKVAIQDYKGAIRDYSYSIELFPTDPETFHQRGLAKISKGDKYDG 346
Query: 503 VEDLSACVKLDKEN 516
DL+ V+L E+
Sbjct: 347 CLDLNTAVELGSED 360
>gi|421597100|ref|ZP_16040780.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
CCGE-LA001]
gi|404270790|gb|EJZ34790.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
CCGE-LA001]
Length = 452
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 5/210 (2%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP EA RG QR L+ A++D+ +AI+ P +AW RG A G++ +A++
Sbjct: 128 DPKDAEAYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVAYYLGGDNEKAVK 187
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
+ +AL +PN A RG K N AV D ++LD Y GL +++
Sbjct: 188 NFDEALRLDPNRARTYTNRGAAYKKLGQLNKAVADDGEAIRLDPRVPEYYDNRGLTYAAM 247
Query: 531 GEYKKAEEAHLKAIQLDR--NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
GEY KA + +AI+ ++ NFL G QF +L AL + L +D F+K Y
Sbjct: 248 GEYDKAIADYDQAIRREQRANFLTNRGDSYQFKGELG---AALSDYEAALKLDPNFAKTY 304
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ R +L +G+ KKA+ D + L +DP N
Sbjct: 305 NNRAVLYKKMGERKKALADYETALKLDPGN 334
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Query: 467 EAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
+A++DL +A+ + +A RG ++ D N A DL+ ++LD ++ AY G+
Sbjct: 81 QALRDLDRAIALDGRNAKAWRVRGDLLREAGGDLNRAAADLTKAIELDPKDAEAYELRGV 140
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
++ +A + +AI+L + +AW Y ++EKA++ + L +D +
Sbjct: 141 VYTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVAYYLGGDNEKAVKNFDEALRLDPNRA 200
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ Y RG LGQ KA+ D + +DP E R Y A+GEY +A+
Sbjct: 201 RTYTNRGAAYKKLGQLNKAVADDGEAIRLDPRVPEYYDNRGLTYAAMGEYDKAI 254
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 33/180 (18%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A G A+ FD+ L+ DP RG A +L A++D EAI+ +P
Sbjct: 172 RGVAYYLGGDNEKAVKNFDEALRLDPNRARTYTNRGAAYKKLGQLNKAVADDGEAIRLDP 231
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKA------------------------------- 475
E + RG AA+GE +AI D +A
Sbjct: 232 RVPEYYDNRGLTYAAMGEYDKAIADYDQAIRREQRANFLTNRGDSYQFKGELGAALSDYE 291
Query: 476 --LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
L+ +PN A + R ++ K + A+ D +KLD N++A + ++ I ++
Sbjct: 292 AALKLDPNFAKTYNNRAVLYKKMGERKKALADYETALKLDPGNENATNGRRVMIAEIAKF 351
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
++I +D R+ +RG+ G+Y AI+ +DQ ++ + L RG + F+ E
Sbjct: 224 GEAIRLDPRVPEYYDNRGLTYAAMGEYDKAIADYDQAIRRE-QRANFLTNRGDSYQFKGE 282
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L AA+SD+ A++ +P+ + + R +GE +A+ D AL+ +P + + + R
Sbjct: 283 LGAALSDYEAALKLDPNFAKTYNNRAVLYKKMGERKKALADYETALKLDPGNENATNGRR 342
Query: 491 IVNFKFKDFNA 501
++ + F A
Sbjct: 343 VMIAEIAKFGA 353
>gi|386000858|ref|YP_005919157.1| hypothetical protein Mhar_0143 [Methanosaeta harundinacea 6Ac]
gi|357208914|gb|AET63534.1| TPR repeat-containing protein [Methanosaeta harundinacea 6Ac]
Length = 609
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 131/272 (48%), Gaps = 5/272 (1%)
Query: 373 ISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
++ ++I +D L+ +G A G Y AI FD+ ++ DP +G A
Sbjct: 146 LAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDATTWYNKGVALGM 205
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q AI + EAI+ +P +AW RG A LG+ EAI L KA+E +P A +
Sbjct: 206 QGNYAEAIPAYDEAIRLDPEDADAWNNRGNALNELGKYDEAIHALDKAIELDPEDAAPWN 265
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G + ++ A++ ++LD E A++ G L+ G+Y +A +A+ +AI+L
Sbjct: 266 NKGKPLWMKGNYTEAIQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLH 325
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
N+++AW + + N +A++ + + +D + ++ +G L LG + + I
Sbjct: 326 PNYVDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEGILA 385
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +DP + + + + G+Y EA+
Sbjct: 386 YDEAIRLDPEEADVWVSKGNSFRMQGKYDEAI 417
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 123/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA N+G Y A FD+ ++ DP Y A +G A + + AI + EAI+ +
Sbjct: 96 NKGIALGNQGNYTEATRCFDEAIRLDPEYAGAWYNKGKALSERGNYTGAILAYDEAIRLD 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW ++G A G EAIQ +A+ +P A + +G+ ++ A+
Sbjct: 156 PELAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDATTWYNKGVALGMQGNYAEAIPA 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD E+ A+ G AL+ +G+Y +A A KAI+LD W + +
Sbjct: 216 YDEAIRLDPEDADAWNNRGNALNELGKYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKG 275
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N +A++ + + +D + A+ +G +L G++ +AI+ + + P+ ++ +
Sbjct: 276 NYTEAIQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLHPNYVDAWINK 335
Query: 626 ASCYHAIGEYREAV 639
S + G Y EA+
Sbjct: 336 GSALYEQGNYPEAI 349
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A G Y AI +D+ ++ DP A +G A + AI F EAI+ +
Sbjct: 130 NKGKALSERGNYTGAILAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQAFDEAIRLD 189
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W +G A G EAI +A+ +P AD + RG + ++ A+
Sbjct: 190 PEDATTWYNKGVALGMQGNYAEAIPAYDEAIRLDPEDADAWNNRGNALNELGKYDEAIHA 249
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L ++LD E+ + + G L G Y +A +A +AI+LD AW + D
Sbjct: 250 LDKAIELDPEDAAPWNNKGKPLWMKGNYTEAIQAFDEAIRLDPELAVAWSNKGTVLADQG 309
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A++ + + + + A+ +G L+ G + +AI+ + +DP N Y +
Sbjct: 310 KYDEAIQAYDEAIRLHPNYVDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNK 369
Query: 626 ASCYHAIGEYREAVI 640
+ +G Y E ++
Sbjct: 370 GNALSELGNYTEGIL 384
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 113/246 (45%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G Y AI FD+ ++ DP Y +A +G ++ A+ + EAI+ +P AW
Sbjct: 2 QGNYTMAIEAFDEAIRLDPEYADAWYSKGLTLYYRGNYTEAVQAYDEAIRLDPEYASAWN 61
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+G A G E+I+ +A+ +P A + +GI ++ A ++LD
Sbjct: 62 NKGLALDYQGNYDESIKAYDEAIRLDPEFAAAWNNKGIALGNQGNYTEATRCFDEAIRLD 121
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
E A+ G ALS G Y A A+ +AI+LD AW + N +A++
Sbjct: 122 PEYAGAWYNKGKALSERGNYTGAILAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQA 181
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + +D + ++ +G+ L G + +AI + +DP + + R + + +G
Sbjct: 182 FDEAIRLDPEDATTWYNKGVALGMQGNYAEAIPAYDEAIRLDPEDADAWNNRGNALNELG 241
Query: 634 EYREAV 639
+Y EA+
Sbjct: 242 KYDEAI 247
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 121/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A +G Y +I +D+ ++ DP + A +G A Q A F EAI+ +
Sbjct: 62 NKGLALDYQGNYDESIKAYDEAIRLDPEFAAAWNNKGIALGNQGNYTEATRCFDEAIRLD 121
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G+A + G AI +A+ +P A H++G F+ ++ A++
Sbjct: 122 PEYAGAWYNKGKALSERGNYTGAILAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQA 181
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD E+ + + G+AL G Y +A A+ +AI+LD +AW + +L
Sbjct: 182 FDEAIRLDPEDATTWYNKGVALGMQGNYAEAIPAYDEAIRLDPEDADAWNNRGNALNELG 241
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ L + + +D + ++ +G L G + +AI+ + +DP +
Sbjct: 242 KYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKGNYTEAIQAFDEAIRLDPELAVAWSNK 301
Query: 626 ASCYHAIGEYREAV 639
+ G+Y EA+
Sbjct: 302 GTVLADQGKYDEAI 315
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 125/255 (49%), Gaps = 2/255 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G ++GKY AI +D+ ++ P Y +A I +G+A Q AI + EAI+ +
Sbjct: 300 NKGTVLADQGKYDEAIQAYDEAIRLHPNYVDAWINKGSALYEQGNYPEAIQAYDEAIRLD 359
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD-FNAAVE 504
P W +G A + LG E I +A+ +P AD+ +G +F+ + ++ A++
Sbjct: 360 PDNAMTWYNKGNALSELGNYTEGILAYDEAIRLDPEEADVWVSKG-NSFRMQGKYDEAIQ 418
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++LD E + G + G+Y +A +A+ +AI+LD + W ++
Sbjct: 419 AYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQ 478
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A++ + + +D F+ A++ +G L+ ++ +AI+ + ++P E
Sbjct: 479 GKYDEAIQAYDEAIRLDPEFAGAWYNKGNALYEQDKYDEAIQAYDEAIRLNPDYKEAWNN 538
Query: 625 RASCYHAIGEYREAV 639
+ + G+Y EA+
Sbjct: 539 KGNALVMQGKYDEAI 553
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 7/266 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D S+G+ G Y A+ +D+ ++ DP Y A +G A +Q + +I + E
Sbjct: 23 ADAWYSKGLTLYYRGNYTEAVQAYDEAIRLDPEYASAWNNKGLALDYQGNYDESIKAYDE 82
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ +P AW +G A G EA + +A+ +P A + +G + ++
Sbjct: 83 AIRLDPEFAAAWNNKGIALGNQGNYTEATRCFDEAIRLDPEYAGAWYNKGKALSERGNYT 142
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ ++LD E +A+ G AL G Y +A +A +AI+LD W +
Sbjct: 143 GAILAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDATTWYNKGVA 202
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI- 619
N +A+ + + +D + A++ RG L+ LG++ +AI L + +DP +
Sbjct: 203 LGMQGNYAEAIPAYDEAIRLDPEDADAWNNRGNALNELGKYDEAIHALDKAIELDPEDAA 262
Query: 620 ------ECLYLRASCYHAIGEYREAV 639
+ L+++ + AI + EA+
Sbjct: 263 PWNNKGKPLWMKGNYTEAIQAFDEAI 288
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 123/259 (47%), Gaps = 2/259 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD +++G A +G Y AI +D+ ++ DP +G A + I + E
Sbjct: 329 VDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEGILAYDE 388
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD-F 499
AI+ +P + W +G + G+ EAIQ +A+ +P AD+ +G +F+ + +
Sbjct: 389 AIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKG-NSFRMQGKY 447
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ A++ ++LD E + G + G+Y +A +A+ +AI+LD F AW +
Sbjct: 448 DEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEFAGAWYNKGN 507
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ ++A++ + + ++ + +A++ +G L G++ +AI+ + +DP
Sbjct: 508 ALYEQDKYDEAIQAYDEAIRLNPDYKEAWNNKGNALVMQGKYDEAIQAYDEAIRLDPEFA 567
Query: 620 ECLYLRASCYHAIGEYREA 638
+ + +G+ EA
Sbjct: 568 YPWFSKGVVLEYLGKVAEA 586
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 114/245 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI FD+ ++ DP A +GT A Q + + AI + EAI+ +P+ +AW
Sbjct: 275 GNYTEAIQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLHPNYVDAWIN 334
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A G EAIQ +A+ +P++A + +G + ++ + ++LD
Sbjct: 335 KGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEGILAYDEAIRLDP 394
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E + G + G+Y +A +A+ +AI+LD + W ++ ++A++
Sbjct: 395 EEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAY 454
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + +D + + +G G++ +AI+ + +DP Y + + + +
Sbjct: 455 DEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEFAGAWYNKGNALYEQDK 514
Query: 635 YREAV 639
Y EA+
Sbjct: 515 YDEAI 519
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 103/202 (50%), Gaps = 3/202 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +S+G + +GKY AI +D+ ++ DP + + +G + Q + + AI + E
Sbjct: 397 ADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDE 456
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ +P + W +G + G+ EAIQ +A+ +P A + +G ++ ++
Sbjct: 457 AIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEFAGAWYNKGNALYEQDKYD 516
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHL 557
A++ ++L+ + K A+ G AL G+Y +A +A+ +AI+LD F W G +
Sbjct: 517 EAIQAYDEAIRLNPDYKEAWNNKGNALVMQGKYDEAIQAYDEAIRLDPEFAYPWFSKGVV 576
Query: 558 TQFYQDLANSEKALECLQQVLY 579
++ +A + +A +++ Y
Sbjct: 577 LEYLGKVAEANEAYAKAEELGY 598
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH- 556
++ A+E ++LD E A+ GL L G Y +A +A+ +AI+LD + AW +
Sbjct: 4 NYTMAIEAFDEAIRLDPEYADAWYSKGLTLYYRGNYTEAVQAYDEAIRLDPEYASAWNNK 63
Query: 557 -LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
L YQ N +++++ + + +D F+ A++ +G+ L G + +A + + +D
Sbjct: 64 GLALDYQ--GNYDESIKAYDEAIRLDPEFAAAWNNKGIALGNQGNYTEATRCFDEAIRLD 121
Query: 616 PSNIECLYLRASCYHAIGEYREAVI 640
P Y + G Y A++
Sbjct: 122 PEYAGAWYNKGKALSERGNYTGAIL 146
>gi|296127340|ref|YP_003634592.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019156|gb|ADG72393.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 617
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 134/258 (51%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A+ N + AI + ++++ D +A RG ++ + + AI DF +
Sbjct: 194 DAYYNRGLAKNNANLHKEAIEDYSKVIELDHKNIDAYNNRGVSKNYLHLFDEAIKDFNKI 253
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P+ A+ RG ++ LG EAI+D KA++ PN AD + R + F
Sbjct: 254 LELDPNNYYAYGNRGNSKHDLGLYKEAIKDYDKAIKINPNYADCYYNRANSKKELGLFKE 313
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++D +K ++ + Y G A + Y++A + + K I+LD N+ +A+ +
Sbjct: 314 AIKDYDNAIKWKPKDINVYINRGNAKYDLELYEEAIKDYDKIIKLDSNYTDAYYNRANAK 373
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
++L +A++ + +Y++ +S+AY+ RGL GLG +K+AIKD + + N E
Sbjct: 374 RELGLYNEAIKDYDKAIYLNPNYSEAYNNRGLAKSGLGMYKEAIKDYEESIDLCADNPEA 433
Query: 622 LYLRASCYHAIGEYREAV 639
Y S + +G +E++
Sbjct: 434 YYNIGSAKYDLGLLKESI 451
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 121/245 (49%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + AI +D +K P I RG A+ E AI D+ + I+ + + +A+
Sbjct: 309 GLFKEAIKDYDNAIKWKPKDINVYINRGNAKYDLELYEEAIKDYDKIIKLDSNYTDAYYN 368
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R A+ LG EAI+D KA+ PN ++ + RG+ + A++D + L
Sbjct: 369 RANAKRELGLYNEAIKDYDKAIYLNPNYSEAYNNRGLAKSGLGMYKEAIKDYEESIDLCA 428
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N AY +G A +G K++ + + KAI+L + EA+ + DL ++A++
Sbjct: 429 DNPEAYYNIGSAKYDLGLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLELYKEAIKDY 488
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + ++ S Y+ RGL LG +K+AIKD S + + P+ + R S +GE
Sbjct: 489 DKSIELNPNDSNTYNNRGLTKSSLGLYKEAIKDYSKAIELSPNYVYAYSNRGSAKDELGE 548
Query: 635 YREAV 639
Y+EA+
Sbjct: 549 YKEAI 553
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 56/288 (19%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL--- 431
K K I+V ++RG A+ + Y AI +D+I+K D Y +A R A+ REL
Sbjct: 325 KPKDINV--YINRGNAKYDLELYEEAIKDYDKIIKLDSNYTDAYYNRANAK---RELGLY 379
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL------------------- 472
AI D+ +AI NP+ EA+ RG A++ LG EAI+D
Sbjct: 380 NEAIKDYDKAIYLNPNYSEAYNNRGLAKSGLGMYKEAIKDYEESIDLCADNPEAYYNIGS 439
Query: 473 ---------------SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
KA+E P ++ + RG+ + + A++D ++L+ +
Sbjct: 440 AKYDLGLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLELYKEAIKDYDKSIELNPNDS 499
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQFYQDLANSEKA 570
+ Y GL SS+G YK+A + + KAI+L N++ A+ + L ++ + + + +KA
Sbjct: 500 NTYNNRGLTKSSLGLYKEAIKDYSKAIELSPNYVYAYSNRGSAKDELGEYKEAIKDYDKA 559
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+E + Y+ Y+ RG + G +K+A+KD L ++P+N
Sbjct: 560 IELKPNMAYL-------YNDRGWVKKNAGLYKEALKDYKKALELEPNN 600
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 127/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++ + G Y AI +D+ +K +P Y + R ++ + AI D+ AI+
Sbjct: 266 NRGNSKHDLGLYKEAIKDYDKAIKINPNYADCYYNRANSKKELGLFKEAIKDYDNAIKWK 325
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG A+ L EAI+D K ++ + N D + R + +N A++D
Sbjct: 326 PKDINVYINRGNAKYDLELYEEAIKDYDKIIKLDSNYTDAYYNRANAKRELGLYNEAIKD 385
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ AY GLA S +G YK+A + + ++I L + EA+ ++ DL
Sbjct: 386 YDKAIYLNPNYSEAYNNRGLAKSGLGMYKEAIKDYEESIDLCADNPEAYYNIGSAKYDLG 445
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+++++ + + + +S+AY+ RGL + L +K+AIKD + ++P++ R
Sbjct: 446 LLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLELYKEAIKDYDKSIELNPNDSNTYNNR 505
Query: 626 ASCYHAIGEYREAV 639
++G Y+EA+
Sbjct: 506 GLTKSSLGLYKEAI 519
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 74/134 (55%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ + Y AI +D+ ++ +P RG ++ + AI D+++AI+ +
Sbjct: 470 NRGLSKNDLELYKEAIKDYDKSIELNPNDSNTYNNRGLTKSSLGLYKEAIKDYSKAIELS 529
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A+ LGE EAI+D KA+E +PN A + ++RG V + A++D
Sbjct: 530 PNYVYAYSNRGSAKDELGEYKEAIKDYDKAIELKPNMAYLYNDRGWVKKNAGLYKEALKD 589
Query: 506 LSACVKLDKENKSA 519
++L+ N+ A
Sbjct: 590 YKKALELEPNNEYA 603
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ K I+ LDS +Y NRA +L L+ I+D DKA+ L+P +AY
Sbjct: 348 AIKDYDKIIK-LDSNYTDAY-----YNRANAKRELGLYNEAIKDYDKAIYLNPNYSEAYN 401
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
+G A S LG +EA+ K YE ++ AD
Sbjct: 402 NRGLAKSGLGMYKEAI----KDYEESIDLCAD 429
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITAR------IELAKLCSLRNWSKAIRILDSL 62
++Y L ++I D+ + + + A R +EL K +++++ K+I L+
Sbjct: 440 AKYDLGLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLELYK-EAIKDYDKSIE-LNPN 497
Query: 63 LAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
+ +Y NR S L L+K I+D KA++L P + AY +G A LG +EA
Sbjct: 498 DSNTYN-----NRGLTKSSLGLYKEAIKDYSKAIELSPNYVYAYSNRGSAKDELGEYKEA 552
Query: 123 LSVWEKGYE 131
+ ++K E
Sbjct: 553 IKDYDKAIE 561
>gi|428307503|ref|YP_007144328.1| hypothetical protein Cri9333_4011 [Crinalium epipsammum PCC 9333]
gi|428249038|gb|AFZ14818.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 1095
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 127/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N +Y A++ +++ ++ P E RG +E + A++D+T AI+
Sbjct: 741 NRGNTYDNLQEYQKALADYNRAIELQPDLAEVYYNRGNTYDNLQEYQKALADYTRAIELQ 800
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG +L E +A+ D ++A+ +P+ A + RG+ +++ A+ D
Sbjct: 801 PDLAIAYSNRGNTYKSLQEYQKALADYTRAIALKPDDAKAYYNRGVTYGNLQEYQKALAD 860
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + SAY GL ++ EY+KA + +AI+L + +A+ Y +L
Sbjct: 861 FTQAIALEPDYASAYYNRGLTYDNLQEYQKAIADYTRAIELQPDLADAYNSRGVTYYNLQ 920
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+KAL + + + AY+ RG L +++KAI D + + + P + E Y R
Sbjct: 921 EYQKALADYTSAIALQPDLADAYNNRGNTYDDLQEYQKAIADYNRAIALQPDDTEAYYNR 980
Query: 626 ASCYHAIGEYREAV 639
Y+ + EY++A+
Sbjct: 981 GITYYNLQEYQKAL 994
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 130/254 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + +Y A++ +++ +K P Y + RG + +E + A++++ AI
Sbjct: 673 NRGLTYKSLQEYQKALADYNRAIKLQPDYADGYYNRGVTYFYLQEYQKALAEYNRAIALQ 732
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ RG L E +A+ D ++A+E +P+ A++ + RG +++ A+ D
Sbjct: 733 LDNAKAYNNRGNTYDNLQEYQKALADYNRAIELQPDLAEVYYNRGNTYDNLQEYQKALAD 792
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + AY+ G S+ EY+KA + +AI L + +A+ + Y +L
Sbjct: 793 YTRAIELQPDLAIAYSNRGNTYKSLQEYQKALADYTRAIALKPDDAKAYYNRGVTYGNLQ 852
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+KAL Q + ++ ++ AY+ RGL L +++KAI D + + + P + R
Sbjct: 853 EYQKALADFTQAIALEPDYASAYYNRGLTYDNLQEYQKAIADYTRAIELQPDLADAYNSR 912
Query: 626 ASCYHAIGEYREAV 639
Y+ + EY++A+
Sbjct: 913 GVTYYNLQEYQKAL 926
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 126/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N +Y A++ + + ++ P A RG +E + A++D+T AI
Sbjct: 775 NRGNTYDNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKSLQEYQKALADYTRAIALK 834
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG L E +A+ D ++A+ EP+ A + RG+ +++ A+ D
Sbjct: 835 PDDAKAYYNRGVTYGNLQEYQKALADFTQAIALEPDYASAYYNRGLTYDNLQEYQKAIAD 894
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + AY G+ ++ EY+KA + AI L + +A+ + Y DL
Sbjct: 895 YTRAIELQPDLADAYNSRGVTYYNLQEYQKALADYTSAIALQPDLADAYNNRGNTYDDLQ 954
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+KA+ + + + ++AY+ RG+ + L +++KA+ D + + + P++ + R
Sbjct: 955 EYQKAIADYNRAIALQPDDTEAYYNRGITYYNLQEYQKALADYNRAIALKPNDADAYSNR 1014
Query: 626 ASCYHAIGEYREAV 639
Y + EY++A+
Sbjct: 1015 GLTYFNLQEYQKAI 1028
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 127/266 (47%), Gaps = 7/266 (2%)
Query: 380 SVDFRLSRGIAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++ + IA N G +Y A++ + + + P +A RG +E +
Sbjct: 796 AIELQPDLAIAYSNRGNTYKSLQEYQKALADYTRAIALKPDDAKAYYNRGVTYGNLQEYQ 855
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A++DFT+AI P A+ RG L E +AI D ++A+E +P+ AD + RG+
Sbjct: 856 KALADFTQAIALEPDYASAYYNRGLTYDNLQEYQKAIADYTRAIELQPDLADAYNSRGVT 915
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ +++ A+ D ++ + L + AY G + EY+KA + +AI L + E
Sbjct: 916 YYNLQEYQKALADYTSAIALQPDLADAYNNRGNTYDDLQEYQKAIADYNRAIALQPDDTE 975
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
A+ + Y +L +KAL + + + + AY RGL L +++KAI D + +
Sbjct: 976 AYYNRGITYYNLQEYQKALADYNRAIALKPNDADAYSNRGLTYFNLQEYQKAIADYNRAI 1035
Query: 613 GIDPSNIECLYLRASCYHAIGEYREA 638
+ P + + R Y + EY++A
Sbjct: 1036 ALQPDDAKAYGNRGLTYSKLQEYQKA 1061
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N +Y A++ F Q + +P Y A RG +E + AI+D+T AI+
Sbjct: 843 NRGVTYGNLQEYQKALADFTQAIALEPDYASAYYNRGLTYDNLQEYQKAIADYTRAIELQ 902
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG L E +A+ D + A+ +P+ AD + RG +++ A+ D
Sbjct: 903 PDLADAYNSRGVTYYNLQEYQKALADYTSAIALQPDLADAYNNRGNTYDDLQEYQKAIAD 962
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L ++ AY G+ ++ EY+KA + +AI L N +A+ + Y +L
Sbjct: 963 YNRAIALQPDDTEAYYNRGITYYNLQEYQKALADYNRAIALKPNDADAYSNRGLTYFNLQ 1022
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+KA+ + + + +KAY RGL L +++KA DL
Sbjct: 1023 EYQKAIADYNRAIALQPDDAKAYGNRGLTYSKLQEYQKAFADL 1065
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 125/258 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+ +Y A++ +++ + +A RG +E + A++D+ A
Sbjct: 703 DGYYNRGVTYFYLQEYQKALAEYNRAIALQLDNAKAYNNRGNTYDNLQEYQKALADYNRA 762
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ P E + RG L E +A+ D ++A+E +P+ A RG +++
Sbjct: 763 IELQPDLAEVYYNRGNTYDNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKSLQEYQK 822
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + + L ++ AY G+ ++ EY+KA +AI L+ ++ A+ + Y
Sbjct: 823 ALADYTRAIALKPDDAKAYYNRGVTYGNLQEYQKALADFTQAIALEPDYASAYYNRGLTY 882
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+L +KA+ + + + + AY+ RG+ + L +++KA+ D +S + + P +
Sbjct: 883 DNLQEYQKAIADYTRAIELQPDLADAYNSRGVTYYNLQEYQKALADYTSAIALQPDLADA 942
Query: 622 LYLRASCYHAIGEYREAV 639
R + Y + EY++A+
Sbjct: 943 YNNRGNTYDDLQEYQKAI 960
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 122/250 (48%), Gaps = 13/250 (5%)
Query: 400 AISIFD---QILKEDP-----MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
A++ FD QI++ P Y +A G+G + + A+ +A Q +P +A
Sbjct: 544 ALAAFDKAIQIIQHQPNFSKQYYAQAYYGKGLTLYWMEKYSEAVDALKQATQIDPKFHQA 603
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W+ RG A +L + EA+ +A++ P + E G + + A+ S +K
Sbjct: 604 WRLRGAALKSLKKYPEALASYQQAIKLSPQEFVLYVELGNTFSNLERYQDAIVAYSDAIK 663
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEK 569
+ K++ AY GL S+ EY+KA + +AI+L ++ + + + +T FY L +K
Sbjct: 664 I-KQHPWAYNNRGLTYKSLQEYQKALADYNRAIKLQPDYADGYYNRGVTYFY--LQEYQK 720
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
AL + + + +KAY+ RG L +++KA+ D + + + P E Y R + Y
Sbjct: 721 ALAEYNRAIALQLDNAKAYNNRGNTYDNLQEYQKALADYNRAIELQPDLAEVYYNRGNTY 780
Query: 630 HAIGEYREAV 639
+ EY++A+
Sbjct: 781 DNLQEYQKAL 790
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 33/277 (11%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA------- 448
KY+ A+ Q + DP + +A RG A ++ A++ + +AI+ +P
Sbjct: 582 KYSEAVDALKQATQIDPKFHQAWRLRGAALKSLKKYPEALASYQQAIKLSPQEFVLYVEL 641
Query: 449 --------------------------GEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
A+ RG +L E +A+ D ++A++ +P+
Sbjct: 642 GNTFSNLERYQDAIVAYSDAIKIKQHPWAYNNRGLTYKSLQEYQKALADYNRAIKLQPDY 701
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
AD + RG+ F +++ A+ + + + L +N AY G ++ EY+KA + +
Sbjct: 702 ADGYYNRGVTYFYLQEYQKALAEYNRAIALQLDNAKAYNNRGNTYDNLQEYQKALADYNR 761
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI+L + E + + Y +L +KAL + + + + AY RG L +++
Sbjct: 762 AIELQPDLAEVYYNRGNTYDNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKSLQEYQ 821
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
KA+ D + + + P + + Y R Y + EY++A+
Sbjct: 822 KALADYTRAIALKPDDAKAYYNRGVTYGNLQEYQKAL 858
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 116/244 (47%), Gaps = 1/244 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI + +K +P A RG +E + A++D+ AI+ P + + R
Sbjct: 650 RYQDAIVAYSDAIKIK-QHPWAYNNRGLTYKSLQEYQKALADYNRAIKLQPDYADGYYNR 708
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L E +A+ + ++A+ + ++A + RG +++ A+ D + ++L +
Sbjct: 709 GVTYFYLQEYQKALAEYNRAIALQLDNAKAYNNRGNTYDNLQEYQKALADYNRAIELQPD 768
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
Y G ++ EY+KA + +AI+L + A+ + Y+ L +KAL
Sbjct: 769 LAEVYYNRGNTYDNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKSLQEYQKALADYT 828
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + + +KAY+ RG+ L +++KA+ D + + ++P Y R Y + EY
Sbjct: 829 RAIALKPDDAKAYYNRGVTYGNLQEYQKALADFTQAIALEPDYASAYYNRGLTYDNLQEY 888
Query: 636 REAV 639
++A+
Sbjct: 889 QKAI 892
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N +Y AI+ + + ++ P +A RG +E + A++D+T AI
Sbjct: 877 NRGLTYDNLQEYQKAIADYTRAIELQPDLADAYNSRGVTYYNLQEYQKALADYTSAIALQ 936
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG L E +AI D ++A+ +P+ + + RGI + +++ A+ D
Sbjct: 937 PDLADAYNNRGNTYDDLQEYQKAIADYNRAIALQPDDTEAYYNRGITYYNLQEYQKALAD 996
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L + AY+ GL ++ EY+KA + +AI L + +A+G+ Y L
Sbjct: 997 YNRAIALKPNDADAYSNRGLTYFNLQEYQKAIADYNRAIALQPDDAKAYGNRGLTYSKLQ 1056
Query: 566 NSEKALECLQQ 576
+KA LQ+
Sbjct: 1057 EYQKAFADLQK 1067
>gi|443313574|ref|ZP_21043185.1| TPR repeat-containing protein [Synechocystis sp. PCC 7509]
gi|442776517|gb|ELR86799.1| TPR repeat-containing protein [Synechocystis sp. PCC 7509]
Length = 289
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 116/263 (44%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S+ +F +G+ QV KY +AI+ F + L+ P Y EAL RG A E AI+
Sbjct: 10 SLEAEFLFHQGVHQVKAEKYEAAIACFTRALRYKPDYSEALSQRGFALGSLGRHEDAIAS 69
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F +A+ P A W RG A LG +EAI +ALEF P+S+ + H RGI +
Sbjct: 70 FDKALMIRPDACWLWHNRGIALGKLGRYIEAINSFDRALEFNPDSSTVWHNRGITWSDYG 129
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
F A+ +KL A+ G AL + ++A + ++I+ + W H
Sbjct: 130 VFEKAIASFDRALKLQPNAYWAWYNRGTALRQLQRGEEALNSFDRSIEFKPDGFLPWYHR 189
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
D E A+ + L I ++ ++ GL L + +++ AI L + P
Sbjct: 190 GLILSDWGKHENAVASFHRALEIQPDCNRTWYNLGLNLGKIKRYEDAIAAFDRVLELKPD 249
Query: 618 NIECLYLRASCYHAIGEYREAVI 640
+ Y R +G EA I
Sbjct: 250 DYWGWYHRGVALEQVGRQEEADI 272
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 2/162 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RGI + G + AI+ FD+ LK P A RGTA R QR E A++ F +I+
Sbjct: 120 NRGITWSDYGVFEKAIASFDRALKLQPNAYWAWYNRGTALRQLQRG-EEALNSFDRSIEF 178
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P W RG + G+ A+ +ALE +P+ + G+ K K + A+
Sbjct: 179 KPDGFLPWYHRGLILSDWGKHENAVASFHRALEIQPDCNRTWYNLGLNLGKIKRYEDAIA 238
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++L ++ + + G+AL +G ++A+ +H KAI +
Sbjct: 239 AFDRVLELKPDDYWGWYHRGVALEQVGRQEEADISHNKAIAI 280
>gi|189347838|ref|YP_001944367.1| hypothetical protein Clim_2365 [Chlorobium limicola DSM 245]
gi|189341985|gb|ACD91388.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM
245]
Length = 308
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 118/252 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI Q EG AI F + L D A RG A++ +++ AI+D+T AI+ NP
Sbjct: 34 GIEQGREGNVREAIDFFSKALVLDTENAGAYYNRGLAKSLGGDVKGAITDYTRAIELNPK 93
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A RG ARA+LG+ A++D+SKA+ +P + + RG +DF A+ D S
Sbjct: 94 LLGAHNNRGFARASLGDFRGAVEDISKAIALDPEVPEFYNNRGTAKSALQDFKGAIADYS 153
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L+ AY GLA S G+ K A AI+ D+ + AW + +
Sbjct: 154 RSISLNPRLAGAYNNRGLAKSMSGDPKGAISDFSLAIERDQRYDAAWYNRGNARVATGDF 213
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
A++ + L ++ +AY+ R LG + A+ DL+ L + P N E Y R
Sbjct: 214 NGAVQDYNKALILNAELVEAYNNRAYAKAALGDFQGAVDDLTRLLQVRPDNPEAYYNRGI 273
Query: 628 CYHAIGEYREAV 639
+G+ A+
Sbjct: 274 AKKQLGDISGAI 285
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 110/223 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G AI+ + + ++ +P A RG ARA + A+ D ++AI +
Sbjct: 66 NRGLAKSLGGDVKGAITDYTRAIELNPKLLGAHNNRGFARASLGDFRGAVEDISKAIALD 125
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E + RG A++AL + AI D S+++ P A + RG+ D A+ D
Sbjct: 126 PEVPEFYNNRGTAKSALQDFKGAIADYSRSISLNPRLAGAYNNRGLAKSMSGDPKGAISD 185
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++ D+ +A+ G A + G++ A + + KA+ L+ +EA+ + L
Sbjct: 186 FSLAIERDQRYDAAWYNRGNARVATGDFNGAVQDYNKALILNAELVEAYNNRAYAKAALG 245
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + A++ L ++L + +AY+ RG+ LG AI DL
Sbjct: 246 DFQGAVDDLTRLLQVRPDNPEAYYNRGIAKKQLGDISGAIGDL 288
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G + A+ + + DP PE RGTA++ ++ + AI+D++ +I N
Sbjct: 100 NRGFARASLGDFRGAVEDISKAIALDPEVPEFYNNRGTAKSALQDFKGAIADYSRSISLN 159
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A++ G+ AI D S A+E + + RG DFN AV+D
Sbjct: 160 PRLAGAYNNRGLAKSMSGDPKGAISDFSLAIERDQRYDAAWYNRGNARVATGDFNGAVQD 219
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ E AY A +++G+++ A + + +Q+ + EA+ + + L
Sbjct: 220 YNKALILNAELVEAYNNRAYAKAALGDFQGAVDDLTRLLQVRPDNPEAYYNRGIAKKQLG 279
Query: 566 NSEKALECLQQVLYIDKRFS 585
+ A+ LQ+ + R S
Sbjct: 280 DISGAIGDLQKAATLGDRLS 299
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I++D F +RG A+ + AI+ + + + +P A RG A++ +
Sbjct: 119 SKAIALDPEVPEFYNNRGTAKSALQDFKGAIADYSRSISLNPRLAGAYNNRGLAKSMSGD 178
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AISDF+ AI+ + AW RG AR A G+ A+QD +KAL + + R
Sbjct: 179 PKGAISDFSLAIERDQRYDAAWYNRGNARVATGDFNGAVQDYNKALILNAELVEAYNNRA 238
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
DF AV+DL+ +++ +N AY G+A +G+ A
Sbjct: 239 YAKAALGDFQGAVDDLTRLLQVRPDNPEAYYNRGIAKKQLGDISGA 284
>gi|427719490|ref|YP_007067484.1| hypothetical protein Cal7507_4274 [Calothrix sp. PCC 7507]
gi|427351926|gb|AFY34650.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 340
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 110/225 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G AIS ++Q +K +P Y EA RG A ++ A I D+ AIQ
Sbjct: 92 NRGLARFELGDIKEAISDYNQAIKLEPNYAEAYNNRGNAYVKLGDINAGIFDYDRAIQFQ 151
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E + RG AR LG+ I D +A+E +P+ A H RG F + A D
Sbjct: 152 PNHAEFYNNRGYARFELGDINAGIFDYDRAIELQPDLASAYHNRGYARFSLGEKQEAYAD 211
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L N AY G S+GEY++A +AIQL ++ A+ + L
Sbjct: 212 CDRAIQLQPSNPKAYYGRGTVQLSLGEYQEAFADFDRAIQLQPDYYIAYFNRGFSRYQLD 271
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
++E A+ Q + + + KAY RGL + LG + AI+D +
Sbjct: 272 DNEGAISDYSQAISLHSNYPKAYFNRGLAKNELGDKQAAIEDFQT 316
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 125/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G AIS ++Q ++ P P A RG AR +++ AISD+ +AI+
Sbjct: 58 NRGLARFQLGDINGAISDYNQAIQLQPDSPLAYNNRGLARFELGDIKEAISDYNQAIKLE 117
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG A LG+ I D +A++F+PN A+ + RG F+ D NA + D
Sbjct: 118 PNYAEAYNNRGNAYVKLGDINAGIFDYDRAIQFQPNHAEFYNNRGYARFELGDINAGIFD 177
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L + SAY G A S+GE ++A +AIQL + +A+ L
Sbjct: 178 YDRAIELQPDLASAYHNRGYARFSLGEKQEAYADCDRAIQLQPSNPKAYYGRGTVQLSLG 237
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A + + + + AY RG + L ++ AI D S + + + + + R
Sbjct: 238 EYQEAFADFDRAIQLQPDYYIAYFNRGFSRYQLDDNEGAISDYSQAISLHSNYPKAYFNR 297
Query: 626 ASCYHAIGEYREAV 639
+ +G+ + A+
Sbjct: 298 GLAKNELGDKQAAI 311
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 115/263 (43%), Gaps = 34/263 (12%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
KS VD ++ + G +AI ++++++ P A RG AR ++ AIS
Sbjct: 15 KSFVVDDYIAAANQKFQAGDIKAAIIDYEKVIQLQPDLTPAYNNRGLARFQLGDINGAIS 74
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D+ +AIQ P + A+ RG AR LG+ EAI D ++A++ EPN A+ + RG K
Sbjct: 75 DYNQAIQLQPDSPLAYNNRGLARFELGDIKEAISDYNQAIKLEPNYAEAYNNRGNAYVKL 134
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
D NA + D ++ + Y G A +G+ + +AI+L
Sbjct: 135 GDINAGIFDYDRAIQFQPNHAEFYNNRGYARFELGDINAGIFDYDRAIELQ--------- 185
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
DLA AYH RG LG+ ++A D + + P
Sbjct: 186 -----PDLA--------------------SAYHNRGYARFSLGEKQEAYADCDRAIQLQP 220
Query: 617 SNIECLYLRASCYHAIGEYREAV 639
SN + Y R + ++GEY+EA
Sbjct: 221 SNPKAYYGRGTVQLSLGEYQEAF 243
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 4/199 (2%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F R + + +F +RG A+ G + I +D+ ++ P A RG AR
Sbjct: 142 FDYDRAIQFQPNHAEFYNNRGYARFELGDINAGIFDYDRAIELQPDLASAYHNRGYARFS 201
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E + A +D AIQ PS +A+ RG + +LGE EA D +A++ +P+
Sbjct: 202 LGEKQEAYADCDRAIQLQPSNPKAYYGRGTVQLSLGEYQEAFADFDRAIQLQPDYYIAYF 261
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG ++ D A+ D S + L AY GLA + +G+ ++A ++ Q
Sbjct: 262 NRGFSRYQLDDNEGAISDYSQAISLHSNYPKAYFNRGLAKNELGD----KQAAIEDFQTA 317
Query: 548 RNFLEAWGHLTQFYQDLAN 566
N + G++ + L+N
Sbjct: 318 ANLYQQQGNIEGYNTALSN 336
>gi|73670079|ref|YP_306094.1| TPR repeat-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72397241|gb|AAZ71514.1| TPR repeat [Methanosarcina barkeri str. Fusaro]
Length = 927
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 132/296 (44%), Gaps = 41/296 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG A N G Y AI+ +D+ ++ DP PEA +G A + E AI + +AI+
Sbjct: 81 IVRGDALANSGNYKEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIKAYNKAIEL 140
Query: 445 NPS------------------------------AGE-----------AWKRRGQARAALG 463
+P A E AW +G A LG
Sbjct: 141 DPQNSLFWYNKGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAWYNKGSALQELG 200
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
EAI +KA+E P + +++G+ + ++ AV+ + ++LD +N +
Sbjct: 201 NYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWANK 260
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G ALS + Y++A A+ ++I+LD AW L N E+A++ + + ID +
Sbjct: 261 GNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDPQ 320
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
S+A +G L+ +G ++AIK L + ++P N Y + S +G Y EAV
Sbjct: 321 NSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAV 376
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 123/252 (48%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A + G Y AI +++ ++ DP EAL +G A E AI +AI+ NP
Sbjct: 295 GFAVASSGNYEEAIKFYNKAIEIDPQNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQ 354
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW +G LG EA++ KA E +P + + +G +++ A++
Sbjct: 355 NAVAWYDKGSILKNLGNYEEAVEAFDKATELDPKKSSAWNNKGNALSSLGNYDEAIKAYD 414
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+++D ++ + G+ALS++G Y+++ +A KAI+++ + W + L N
Sbjct: 415 KAIEIDPQDPGPWNNKGIALSNLGSYEESIKAFDKAIEINLSSSVTWANKGLVLSILGNY 474
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E A++ + + ID R S A+ +G L+ G+++ I + +DP N++ +
Sbjct: 475 EGAIKAFDKSIEIDPRNSIAWVNKGNALYNSGEYEGVITACDKAIELDPKNLDAWTNKGK 534
Query: 628 CYHAIGEYREAV 639
++G+Y EA+
Sbjct: 535 ALSSLGDYEEAI 546
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 136/278 (48%), Gaps = 3/278 (1%)
Query: 365 NKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + +T +K+ I +++ +G+A N G Y A+ ++ ++ DP P +
Sbjct: 201 NYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWANK 260
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A + E AI+ + E+I+ +P AW G A A+ G EAI+ +KA+E +P
Sbjct: 261 GNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDPQ 320
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+++ L +G + + A++ L ++++ +N A+ G L ++G Y++A EA
Sbjct: 321 NSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEAFD 380
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KA +LD AW + L N ++A++ + + ID + ++ +G+ L LG +
Sbjct: 381 KATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKGIALSNLGSY 440
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+++IK + I+ S+ + +G Y A+
Sbjct: 441 EESIKAFDKAIEINLSSSVTWANKGLVLSILGNYEGAI 478
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 1/244 (0%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ +++ ++ DP A G G A A E AI + +AI+ +P EA +G
Sbjct: 270 YEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDPQNSEALSNKG 329
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A +G EAI+ L KA+E P +A +++G + ++ AVE +LD +
Sbjct: 330 FALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEAFDKATELDPKK 389
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
SA+ G ALSS+G Y +A +A+ KAI++D W + +L + E++++ +
Sbjct: 390 SSAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKGIALSNLGSYEESIKAFDK 449
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ I+ S + +GL+L LG ++ AIK + IDP N + + + GEY
Sbjct: 450 AIEINLSSSVTWANKGLVLSILGNYEGAIKAFDKSIEIDPRNSIAWVNKGNALYNSGEY- 508
Query: 637 EAVI 640
E VI
Sbjct: 509 EGVI 512
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 121/253 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A G Y ++ +D+ ++ DP Y +A +G + + E AI + +AI+ P
Sbjct: 601 KGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLKNYEEAIKAYDKAIELKP 660
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +G A EA++ KA+E + + +G D+ A+
Sbjct: 661 QNSLAWNNKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNNKGNTLSSLYDYEGALNAY 720
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ V+++ + A+ G L S+G Y++A A K +++D + AW + L N
Sbjct: 721 NKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHNSFAWCNKGIALSSLGN 780
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A++ + L ID + S + +GL L G++++A+K + + ID SN E R
Sbjct: 781 YEEAMKSFDKALEIDSQNSLIWSNKGLALFEFGKYEEAVKAYNKTIEIDQSNTETWNNRG 840
Query: 627 SCYHAIGEYREAV 639
S + IG Y EA+
Sbjct: 841 SAFFLIGNYEEAM 853
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 122/232 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A N YA A+ +D+ ++ + A +G + + E A++ + +A++ N
Sbjct: 668 NKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNNKGNTLSSLYDYEGALNAYNKAVEIN 727
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G +LG EA+ +K LE +P+++ +GI ++ A++
Sbjct: 728 PQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHNSFAWCNKGIALSSLGNYEEAMKS 787
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++D +N ++ GLAL G+Y++A +A+ K I++D++ E W + + +
Sbjct: 788 FDKALEIDSQNSLIWSNKGLALFEFGKYEEAVKAYNKTIEIDQSNTETWNNRGSAFFLIG 847
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
N E+A++ + + +D +S A++ R L + +++I DL + I+P+
Sbjct: 848 NYEEAMKNYNKTIELDPEYSLAWYNRACLYSLINDKEQSISDLKRAIEINPA 899
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 124/261 (47%), Gaps = 1/261 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D ++G A + G Y AI +D+ L+ +P P R A E A+
Sbjct: 525 NLDAWTNKGKALSSLGDYEEAIKAYDKALEIEPQDPLTWNNREIAFGHLNNYEEALRAHN 584
Query: 440 EAIQSNPSAGE-AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
I S+ E +W +G A G E+++ KA+E +P AD +G F K+
Sbjct: 585 REIVSDSEDPEVSWNDKGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLKN 644
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A++ ++L +N A+ GLAL++ Y +A +++ KAI+L+ AW +
Sbjct: 645 YEEAIKAYDKAIELKPQNSLAWNNKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNNKG 704
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
L + E AL + + I+ ++S A++ +G L LG++++A+ + L IDP N
Sbjct: 705 NTLSSLYDYEGALNAYNKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHN 764
Query: 619 IECLYLRASCYHAIGEYREAV 639
+ ++G Y EA+
Sbjct: 765 SFAWCNKGIALSSLGNYEEAM 785
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 7/232 (3%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P A I RG A A + AI+ + +AI+ +P EAW +G A + L EAI+ +K
Sbjct: 77 PIAWIVRGDALANSGNYKEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIKAYNK 136
Query: 475 ALEFEP-------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A+E +P N L+E G K + ++E ++LD N A+ G AL
Sbjct: 137 AIELDPQNSLFWYNKGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAWYNKGSAL 196
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+G Y++A A+ KAI++ + EAW + + N E+A++ + + +D + +
Sbjct: 197 QELGNYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRV 256
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +G L L +++AI + + +DP N + G Y EA+
Sbjct: 257 WANKGNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAI 308
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 120/269 (44%), Gaps = 5/269 (1%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D + S +G A N G AI D+ ++ +P A +G+
Sbjct: 312 NKAIEIDPQNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGN 371
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E A+ F +A + +P AW +G A ++LG EAI+ KA+E +P + +G
Sbjct: 372 YEEAVEAFDKATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKG 431
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
I + +++ ++++ + + GL LS +G Y+ A +A K+I++D
Sbjct: 432 IALSNLGSYEESIKAFDKAIEINLSSSVTWANKGLVLSILGNYEGAIKAFDKSIEIDPRN 491
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
AW + + E + + + +D + A+ +G L LG +++AIK
Sbjct: 492 SIAWVNKGNALYNSGEYEGVITACDKAIELDPKNLDAWTNKGKALSSLGDYEEAIKAYDK 551
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I+P + R + + Y EA+
Sbjct: 552 ALEIEPQDPLTWNNREIAFGHLNNYEEAL 580
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 138/327 (42%), Gaps = 48/327 (14%)
Query: 361 EAKRNKKFCVTRISK--------SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQI 407
EA NK F + + K+I V+ + +G N G Y A+ FD+
Sbjct: 323 EALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEAFDKA 382
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
+ DP A +G A + + AI + +AI+ +P W +G A + LG E
Sbjct: 383 TELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKGIALSNLGSYEE 442
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
+I+ KA+E +S+ +G+V ++ A++ +++D N A+ G AL
Sbjct: 443 SIKAFDKAIEINLSSSVTWANKGLVLSILGNYEGAIKAFDKSIEIDPRNSIAWVNKGNAL 502
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ GEY+ A KAI+LD L+AW + + L + E+A++ + L I+ +
Sbjct: 503 YNSGEYEGVITACDKAIELDPKNLDAWTNKGKALSSLGDYEEAIKAYDKALEIEPQDPLT 562
Query: 588 Y--------HL---------------------------RGLLLHGLGQHKKAIKDLSSGL 612
+ HL +GL L+ G +++++K +
Sbjct: 563 WNNREIAFGHLNNYEEALRAHNREIVSDSEDPEVSWNDKGLALYYSGNYEESVKAYDKAI 622
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAV 639
+DP + + + + + ++ Y EA+
Sbjct: 623 ELDPEYADAWFNKGNSFFSLKNYEEAI 649
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 98/188 (52%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A++ +++ ++ +P Y +A +G E A++ F + ++ +P AW +G
Sbjct: 713 YEGALNAYNKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHNSFAWCNKG 772
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A ++LG EA++ KALE + ++ I +G+ F+F + AV+ + +++D+ N
Sbjct: 773 IALSSLGNYEEAMKSFDKALEIDSQNSLIWSNKGLALFEFGKYEEAVKAYNKTIEIDQSN 832
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ G A IG Y++A + + K I+LD + AW + Y + + E+++ L++
Sbjct: 833 TETWNNRGSAFFLIGNYEEAMKNYNKTIELDPEYSLAWYNRACLYSLINDKEQSISDLKR 892
Query: 577 VLYIDKRF 584
+ I+ +
Sbjct: 893 AIEINPAY 900
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E+ A+ G AL++ G YK+A A+ KAI+LD EAW + +L+N E+A++
Sbjct: 75 ESPIAWIVRGDALANSGNYKEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIKAY 134
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQ-------HKKAIKDLSSGLGIDPSNIECLYLRAS 627
+ + +D + S ++ +G L+ LG+ +K++++ + + +DP N Y + S
Sbjct: 135 NKAIELDPQNSLFWYNKGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAWYNKGS 194
Query: 628 CYHAIGEYREAV 639
+G Y+EA+
Sbjct: 195 ALQELGNYQEAI 206
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
L ++I D+ + ++ ++S++T + L L N+ AI+ D +S EI
Sbjct: 436 NLGSYEESIKAFDKAIEIN--LSSSVTWANKGLVLSILGNYEGAIKAFD----KSIEIDP 489
Query: 72 ICNRAFC------YSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+ A+ Y+ E ++ VI CDKA++LDP L A+ KG A S+LG EEA+
Sbjct: 490 RNSIAWVNKGNALYNSGE-YEGVITACDKAIELDPKNLDAWTNKGKALSSLGDYEEAIKA 548
Query: 126 WEKGYE 131
++K E
Sbjct: 549 YDKALE 554
>gi|220925996|ref|YP_002501298.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219950603|gb|ACL60995.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 1056
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 129/257 (50%), Gaps = 6/257 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG+ N+ +Y AI+ FDQ L+ DP +A+I R AF+ E + AI+++ +A+Q
Sbjct: 439 NRGLIFQNKSEYDQAIADFDQALRLDPK--DAVIYRNRGDAFRSKGEYDRAIANYDQALQ 496
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAA 502
+P RG A GE A+ D +AL+ +P A + RG V F+ K + + A
Sbjct: 497 LDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLDPKQAVVYTNRGDV-FRIKGEHDRA 555
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D ++LD + AY GL + GEY +A + + ++LD + A+ + +Q
Sbjct: 556 IADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYANRGDTFQ 615
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
++A+ Q L + ++ AY+ RGL + G+H +AI D L +DP +
Sbjct: 616 SKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAAF 675
Query: 623 YLRASCYHAIGEYREAV 639
R + + GEY A+
Sbjct: 676 NNRGAALNKKGEYDRAI 692
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 121/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +G+Y A++ +DQ L+ DP RG + E E AI+D+ +A++ +
Sbjct: 235 NRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLD 294
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG E +AI D +AL +P A I RG +++ A+ +
Sbjct: 295 PKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIAN 354
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + + + GLA GEY +A + +A+QLD + + ++
Sbjct: 355 YDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFRIKG 414
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ Q L +D ++ AY+ RGL+ ++ +AI D L +DP + R
Sbjct: 415 EHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNR 474
Query: 626 ASCYHAIGEYREAV 639
+ + GEY A+
Sbjct: 475 GDAFRSKGEYDRAI 488
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 3/260 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V +R +RG+A ++ G Y AI+ +Q L+ DP RG A F+ E + AI+D+ +
Sbjct: 27 VGYR-NRGLASLHNGAYDRAIADLNQALRLDPKSASTYNDRGIAFKFKGEYDRAIADYDQ 85
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DF 499
A++ +P + RG A A GE AI D ++AL P + RG V F+ K +
Sbjct: 86 ALRLDPKDAVFYNNRGNAFGAKGEHDRAIADFNQALTLNPRYSIAYKNRGDV-FRIKGEH 144
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ A+ D ++LD + K AY GL+ EY +A +A++LD + +
Sbjct: 145 DRAIADYDQALQLDPKYKLAYNNRGLSFQRKSEYDRAIADFDQALRLDPKDAVIYRNRGD 204
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
++ ++A+ Q L +D +++ ++ RGL +G G++ +A+ D L +DP
Sbjct: 205 AFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQA 264
Query: 620 ECLYLRASCYHAIGEYREAV 639
R + GE+ A+
Sbjct: 265 IVYTNRGDVFRIKGEHERAI 284
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 124/246 (50%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G++ AI+ +DQ L+ DP Y A RG + E + AI+DF +A++ +P ++
Sbjct: 413 KGEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYR 472
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A + GE AI + +AL+ +P A + + RG+ ++ ++ A+ D ++LD
Sbjct: 473 NRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLD 532
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ YT G GE+ +A + +A++LD ++ A+ + +Q+ ++A+
Sbjct: 533 PKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVD 592
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
Q L +D +++ AY RG G++ +AI D L +P + R ++ G
Sbjct: 593 YDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKG 652
Query: 634 EYREAV 639
E+ A+
Sbjct: 653 EHDRAI 658
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 121/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +G+Y A++ +DQ L+ DP RG + E E AI+D+ +A++ +
Sbjct: 371 NRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLD 430
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG E +AI D +AL +P A I RG +++ A+ +
Sbjct: 431 PKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIAN 490
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + + + GLA GEY +A + +A+QLD + + ++
Sbjct: 491 YDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLDPKQAVVYTNRGDVFRIKG 550
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ Q L +D ++ AY+ RGL+ G++ +AI D L +DP R
Sbjct: 551 EHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYANR 610
Query: 626 ASCYHAIGEYREAV 639
+ + GEY A+
Sbjct: 611 GDTFQSKGEYDRAI 624
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 122/257 (47%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F +RG A +G++ AI+ F+Q L +P Y A RG + E + AI+D+ +A+
Sbjct: 96 FYNNRGNAFGAKGEHDRAIADFNQALTLNPRYSIAYKNRGDVFRIKGEHDRAIADYDQAL 155
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q +P A+ RG + E AI D +AL +P A I RG +++ A
Sbjct: 156 QLDPKYKLAYNNRGLSFQRKSEYDRAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRA 215
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ + ++LD + + + GLA GEY +A + +A+QLD + + ++
Sbjct: 216 IANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFR 275
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
E+A+ Q L +D ++ AY+ RGL+ ++ +AI D L +DP +
Sbjct: 276 IKGEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIY 335
Query: 623 YLRASCYHAIGEYREAV 639
R + + GEY A+
Sbjct: 336 RNRGDAFRSKGEYDRAI 352
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 117/255 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ L+ D Y RG A + E A++D+ +A+Q +
Sbjct: 337 NRGDAFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLD 396
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG GE AI D +AL +P + RG++ +++ A+ D
Sbjct: 397 PKQAIVYTNRGDVFRIKGEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIAD 456
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD ++ Y G A S GEY +A + +A+QLD + + +
Sbjct: 457 FDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKG 516
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+AL Q L +D + + Y RG + G+H +AI D L +DP I R
Sbjct: 517 EYGRALADYDQALQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNR 576
Query: 626 ASCYHAIGEYREAVI 640
+ GEY A++
Sbjct: 577 GLVFQNKGEYDRAIV 591
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 2/250 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++G+Y AI+ +DQ L+ DP Y RG A + E A++D+ +A+Q +
Sbjct: 473 NRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLD 532
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG GE AI D +AL +P + RG+V +++ A+ D
Sbjct: 533 PKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVD 592
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQDL 564
++LD + AY G S GEY +A + +A+Q + ++ A+ G FY+
Sbjct: 593 YDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRK- 651
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ ++ L +D + + A++ RG L+ G++ +AI DL L + P Y
Sbjct: 652 GEHDRAIADYEEALRLDPKSAAAFNNRGAALNKKGEYDRAITDLDQALRLKPGFANPHYH 711
Query: 625 RASCYHAIGE 634
R + + G+
Sbjct: 712 RGTAFRHKGD 721
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 121/246 (49%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G++ AI+ +DQ L+ DP Y A RG + E + AI+DF +A++ +P ++
Sbjct: 277 KGEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYR 336
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A + GE AI + +AL+ + A + + RG+ + ++ A+ D ++LD
Sbjct: 337 NRGDAFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLD 396
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ YT G GE+++A + +A++LD + A+ + +Q+ + ++A+
Sbjct: 397 PKQAIVYTNRGDVFRIKGEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIAD 456
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
Q L +D + + Y RG G++ +AI + L +DP R ++ G
Sbjct: 457 FDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKG 516
Query: 634 EYREAV 639
EY A+
Sbjct: 517 EYGRAL 522
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 124/257 (48%), Gaps = 6/257 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG+ N+ +Y AI+ FDQ L+ DP +A+I R AF+ E + AI+++ +A+Q
Sbjct: 303 NRGLIFQNKSEYDQAIADFDQALRLDPK--DAVIYRNRGDAFRSKGEYDRAIANYDQALQ 360
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAA 502
+ RG A GE A+ D +AL+ +P A + RG V F+ K + A
Sbjct: 361 LDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDV-FRIKGEHERA 419
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D ++LD + K AY GL + EY +A +A++LD + + ++
Sbjct: 420 IADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFR 479
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
++A+ Q L +D +++ ++ RGL + G++ +A+ D L +DP
Sbjct: 480 SKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLDPKQAVVY 539
Query: 623 YLRASCYHAIGEYREAV 639
R + GE+ A+
Sbjct: 540 TNRGDVFRIKGEHDRAI 556
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 111/223 (49%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G++ AI+ +DQ L+ DP Y A RG + E + AI D+ + ++ +P A+
Sbjct: 549 KGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYA 608
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + GE AI D +AL+ P + RG+ ++ + + A+ D ++LD
Sbjct: 609 NRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLD 668
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ +A+ G AL+ GEY +A +A++L F H ++ + ++AL
Sbjct: 669 PKSAAAFNNRGAALNKKGEYDRAITDLDQALRLKPGFANPHYHRGTAFRHKGDLDRALAD 728
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
L + + ++ +++ AY RG+ G+ +A+ D + + + P
Sbjct: 729 LNEAVRLNPKYADAYQERGVTFQARGEPDRALADFAEAVRLKP 771
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++G+Y AI+ +DQ L+ +P Y A GRG A + E + AI+D+ EA++ +
Sbjct: 609 NRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLD 668
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVE 504
P + A+ RG A GE AI DL +AL +P A+ + RG F+ K D + A+
Sbjct: 669 PKSAAAFNNRGAALNKKGEYDRAITDLDQALRLKPGFANPHYHRGTA-FRHKGDLDRALA 727
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------DRNFLEAWG 555
DL+ V+L+ + AY G+ + GE +A +A++L D FL+ G
Sbjct: 728 DLNEAVRLNPKYADAYQERGVTFQARGEPDRALADFAEAVRLKPELEADATFLKVRG 784
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQ 65
YR + + + + D+ +++D A T R ++ ++ ++ ++ +A+R LD
Sbjct: 513 YRKGEYGRALADYDQALQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALR-LDPKYIF 571
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+Y NR + + I D D+ L+LDP AY +G F + G + A++
Sbjct: 572 AYN-----NRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIAD 626
Query: 126 WEKGYEH 132
+++ +H
Sbjct: 627 YDQALQH 633
>gi|257062263|ref|YP_003142321.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
gi|256592523|gb|ACV03373.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
Length = 279
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 114/211 (54%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y I + +I+++ P EA RG A A + AI DF ++I+ NP+ EA++ RG
Sbjct: 41 YDQVIIDYTEIIQDFPDCAEAYSDRGCAYAAIGDYTHAIQDFNKSIKLNPNYYEAYRGRG 100
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ EAI+D KA++ +P A H +GI K ++ A+E+ ++ + +
Sbjct: 101 FVYGKQEKYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNPQY 160
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A+ G+A + +Y++A KAI+ + N++EA + Y+ NSEKA+E Q
Sbjct: 161 AEAFNGRGIAYIQMEKYRQALNDFDKAIKFNSNYIEAIYNKGIAYKQQGNSEKAIEAFTQ 220
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
V+ ID + +AY RG + LG++KKAI+D
Sbjct: 221 VIQIDSDYLEAYIERGYVYGELGKYKKAIED 251
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 94/186 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G Y AI F++ +K +P Y EA GRG Q + E AI DF +AI+ P
Sbjct: 65 RGCAYAAIGDYTHAIQDFNKSIKLNPNYYEAYRGRGFVYGKQEKYEEAIKDFEKAIKIKP 124
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ +G A LG +A+++ KA++ P A+ + RGI + + + A+ D
Sbjct: 125 KYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNPQYAEAFNGRGIAYIQMEKYRQALNDF 184
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+K + A G+A G +KA EA + IQ+D ++LEA+ Y +L
Sbjct: 185 DKAIKFNSNYIEAIYNKGIAYKQQGNSEKAIEAFTQVIQIDSDYLEAYIERGYVYGELGK 244
Query: 567 SEKALE 572
+KA+E
Sbjct: 245 YKKAIE 250
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG + KY AI F++ +K P Y +A G+G A E A+ +F +AIQ+N
Sbjct: 98 GRGFVYGKQEKYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQNN 157
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG A + + +A+ D KA++F N + ++ +GI + + A+E
Sbjct: 158 PQYAEAFNGRGIAYIQMEKYRQALNDFDKAIKFNSNYIEAIYNKGIAYKQQGNSEKAIEA 217
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+ +++D + AY G +G+YKKA E
Sbjct: 218 FTQVIQIDSDYLEAYIERGYVYGELGKYKKAIE 250
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 73/142 (51%), Gaps = 7/142 (4%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+ ++D C + AY+ G A ++IG+Y A + K+I+L+ N+ EA+
Sbjct: 47 DYTEIIQDFPDCAE-------AYSDRGCAYAAIGDYTHAIQDFNKSIKLNPNYYEAYRGR 99
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
Y E+A++ ++ + I ++++A+H +G+ LG ++KA+++ + +P
Sbjct: 100 GFVYGKQEKYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNPQ 159
Query: 618 NIECLYLRASCYHAIGEYREAV 639
E R Y + +YR+A+
Sbjct: 160 YAEAFNGRGIAYIQMEKYRQAL 181
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++K+I+ L+ ++Y R F Y + E ++ I+D +KA+++ P QA+
Sbjct: 78 AIQDFNKSIK-LNPNYYEAYR-----GRGFVYGKQEKYEEAIKDFEKAIKIKPKYAQAFH 131
Query: 108 LKGCAFSALGRKEEALSVWEK 128
+G A++ LG E+AL + K
Sbjct: 132 GQGIAYTKLGNYEKALENFRK 152
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 15 KTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSYEI 69
K + I + ++ +++ A A + I KL +L N+ KAI+ + A+++
Sbjct: 108 KYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQ-NNPQYAEAFN- 165
Query: 70 QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
R Y Q+E ++ + D DKA++ + ++A KG A+ G E+A+ +
Sbjct: 166 ----GRGIAYIQMEKYRQALNDFDKAIKFNSNYIEAIYNKGIAYKQQGNSEKAIEAF 218
>gi|186682238|ref|YP_001865434.1| hypothetical protein Npun_R1829 [Nostoc punctiforme PCC 73102]
gi|186464690|gb|ACC80491.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 539
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 128/234 (54%), Gaps = 4/234 (1%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K S ++ RG+ G Y +AI+ + Q ++ + ++ RG A + LE A
Sbjct: 273 KVTSSDINLYYKRGLTHYQIGDYEAAIADYSQAIQMNIQDAKSYNKRGLALSQLGRLEEA 332
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+D+T+AI+ NP+ A+K R +AR+ +G++ AI+D ++A++ P+ AD RGI +
Sbjct: 333 INDYTQAIRINPNVAVAYKNRAEARSHIGDNQGAIEDYTQAIKINPHYADAYKNRGIARY 392
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
++ +K++ ++ AY G A S +G+++ A E + +AIQ++ N+ +A+
Sbjct: 393 LL----SSQPGFPQAIKINPKDAIAYKKRGNARSDLGDFEGAIEDYTQAIQINPNYADAY 448
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + DL + E+A+E Q + I+ ++ AY+ RG + + + AI+D
Sbjct: 449 YNRDNAHSDLGDFERAIEDYTQAIQINYNYADAYYNRGNIRLEIADKQGAIEDF 502
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 5/176 (2%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I + +++V ++ +R A+ + G AI + Q +K +P Y +A RG AR L
Sbjct: 340 IRINPNVAVAYK-NRAEARSHIGDNQGAIEDYTQAIKINPHYADAYKNRGIARY----LL 394
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
++ F +AI+ NP A+K+RG AR+ LG+ AI+D ++A++ PN AD + R
Sbjct: 395 SSQPGFPQAIKINPKDAIAYKKRGNARSDLGDFEGAIEDYTQAIQINPNYADAYYNRDNA 454
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ DF A+ED + ++++ AY G I + + A E KA + R
Sbjct: 455 HSDLGDFERAIEDYTQAIQINYNYADAYYNRGNIRLEIADKQGAIEDFHKAADIYR 510
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 108/232 (46%), Gaps = 30/232 (12%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F + +N + + + G GE AI + KAL+ + ++ ++RG+ +++
Sbjct: 234 FFQPEYNNEDSNTLYAKLGDEYFEKGEYTNAIVNYGKALKVTSSDINLYYKRGLTHYQIG 293
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+ AA+ D S ++++ ++ +Y GLALS +G ++A + +AI+++ N A+ +
Sbjct: 294 DYEAAIADYSQAIQMNIQDAKSYNKRGLALSQLGRLEEAINDYTQAIRINPNVAVAYKNR 353
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH--------------------- 596
+ + +++ A+E Q + I+ ++ AY RG+ +
Sbjct: 354 AEARSHIGDNQGAIEDYTQAIKINPHYADAYKNRGIARYLLSSQPGFPQAIKINPKDAIA 413
Query: 597 ---------GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG + AI+D + + I+P+ + Y R + + +G++ A+
Sbjct: 414 YKKRGNARSDLGDFEGAIEDYTQAIQINPNYADAYYNRDNAHSDLGDFERAI 465
>gi|254412800|ref|ZP_05026573.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180535|gb|EDX75526.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 595
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 131/264 (49%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ + + D RG+A+ + + A+ F ++++ +A RG A +
Sbjct: 263 TKLIELAPSNTDAYYQRGLARYDLEDWQGAVEDFTELIQRKSNDDQAYYHRGIANYQLNQ 322
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+AAI+D +AIQ NP +A+ RG +A+G EA+ D ++A+E+ PN A + RG
Sbjct: 323 YKAAIADLDQAIQLNPQNAQAYAARGLVLSAMGNQQEAMADYTQAIEYNPNDAKAYYNRG 382
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
F D+ AV+D + + +D + AYT A ++G Y+ A +AI + N
Sbjct: 383 RTRFHLADYRGAVDDYTQAIAIDPTDSMAYTNRCQAKFNLGNYRDAIADCTEAITQNPNN 442
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + + +L + +KAL+ Q + I+ + AY RG + LG ++ A++D +
Sbjct: 443 HIAYNNRCIAHLNLKDYQKALKDCSQSIRIEPSYENAYINRGEIRRKLGDNQGALEDYTQ 502
Query: 611 GLGIDPSNIECLYLRASCYHAIGE 634
+ ++P+N RA G+
Sbjct: 503 AIRLNPNNSVAYTNRARVRRKFGD 526
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 121/234 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G+ + G AI FD+ ++ +P P A RG A +AA+ D+T+ I+
Sbjct: 209 FEQGVEHLKSGNVQGAIEAFDESIQLNPNNPLAYGNRGIAYDDLGAHQAAVEDYTKLIEL 268
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
PS +A+ +RG AR L + A++D ++ ++ + N + RGI N++ + AA+
Sbjct: 269 APSNTDAYYQRGLARYDLEDWQGAVEDFTELIQRKSNDDQAYYHRGIANYQLNQYKAAIA 328
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DL ++L+ +N AY GL LS++G ++A + +AI+ + N +A+ + + L
Sbjct: 329 DLDQAIQLNPQNAQAYAARGLVLSAMGNQQEAMADYTQAIEYNPNDAKAYYNRGRTRFHL 388
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
A+ A++ Q + ID S AY R LG ++ AI D + + +P+N
Sbjct: 389 ADYRGAVDDYTQAIAIDPTDSMAYTNRCQAKFNLGNYRDAIADCTEAITQNPNN 442
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 105/209 (50%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
++ AI F E+IQ NP+ A+ RG A LG A++D +K +E P++ D ++RG
Sbjct: 221 VQGAIEAFDESIQLNPNNPLAYGNRGIAYDDLGAHQAAVEDYTKLIELAPSNTDAYYQRG 280
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + +D+ AVED + ++ + AY + G+A + +YK A +AIQL+
Sbjct: 281 LARYDLEDWQGAVEDFTELIQRKSNDDQAYYHRGIANYQLNQYKAAIADLDQAIQLNPQN 340
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+A+ + N ++A+ Q + + +KAY+ RG L ++ A+ D +
Sbjct: 341 AQAYAARGLVLSAMGNQQEAMADYTQAIEYNPNDAKAYYNRGRTRFHLADYRGAVDDYTQ 400
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ IDP++ R +G YR+A+
Sbjct: 401 AIAIDPTDSMAYTNRCQAKFNLGNYRDAI 429
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 125/253 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA +Y +AI+ DQ ++ +P +A RG + + A++D+T+AI+ NP
Sbjct: 313 RGIANYQLNQYKAAIADLDQAIQLNPQNAQAYAARGLVLSAMGNQQEAMADYTQAIEYNP 372
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG+ R L + A+ D ++A+ +P + R F ++ A+ D
Sbjct: 373 NDAKAYYNRGRTRFHLADYRGAVDDYTQAIAIDPTDSMAYTNRCQAKFNLGNYRDAIADC 432
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + N AY +A ++ +Y+KA + ++I+++ ++ A+ + + + L +
Sbjct: 433 TEAITQNPNNHIAYNNRCIAHLNLKDYQKALKDCSQSIRIEPSYENAYINRGEIRRKLGD 492
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++ ALE Q + ++ S AY R + G + A+ D + + ++P+N R
Sbjct: 493 NQGALEDYTQAIRLNPNNSVAYTNRARVRRKFGDNSGALDDYTKAIQLNPNNAFAYSGRG 552
Query: 627 SCYHAIGEYREAV 639
+ +G EA+
Sbjct: 553 LTHAELGNTMEAI 565
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 2/237 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G A++ + Q ++ +P +A RG R + A+ D+T+AI +
Sbjct: 346 ARGLVLSAMGNQQEAMADYTQAIEYNPNDAKAYYNRGRTRFHLADYRGAVDDYTQAIAID 405
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R QA+ LG +AI D ++A+ PN+ + R I + KD+ A++D
Sbjct: 406 PTDSMAYTNRCQAKFNLGNYRDAIADCTEAITQNPNNHIAYNNRCIAHLNLKDYQKALKD 465
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++++ ++AY G +G+ + A E + +AI+L+ N A+ + + +
Sbjct: 466 CSQSIRIEPSYENAYINRGEIRRKLGDNQGALEDYTQAIRLNPNNSVAYTNRARVRRKFG 525
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL--SSGLGIDPSNIE 620
++ AL+ + + ++ + AY RGL LG +AI D +S L +D I+
Sbjct: 526 DNSGALDDYTKAIQLNPNNAFAYSGRGLTHAELGNTMEAINDFEQASKLHLDNGRID 582
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 49 LRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
L +W A+ L+ +S + Q +R QL +K I D D+A+QL+P QAY
Sbjct: 286 LEDWQGAVEDFTELIQRKSNDDQAYYHRGIANYQLNQYKAAIADLDQAIQLNPQNAQAYA 345
Query: 108 LKGCAFSALGRKEEALSVWEKGYEH 132
+G SA+G ++EA++ + + E+
Sbjct: 346 ARGLVLSAMGNQQEAMADYTQAIEY 370
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + G A+ + Q ++ +P A R R + A+ D+T+AIQ
Sbjct: 481 INRGEIRRKLGDNQGALEDYTQAIRLNPNNSVAYTNRARVRRKFGDNSGALDDYTKAIQL 540
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
NP+ A+ RG A LG ++EAI D +A
Sbjct: 541 NPNNAFAYSGRGLTHAELGNTMEAINDFEQA 571
>gi|427737387|ref|YP_007056931.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
gi|427372428|gb|AFY56384.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
Length = 671
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 119/232 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ AI ++Q +K +P Y +A GRG AR +E AI+D +AI P +A+ +
Sbjct: 396 GEFNGAIIDYNQAIKLNPEYADAYYGRGLARHEIKENRKAIADLNQAIAIKPKFTKAYFQ 455
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG +G+ +EAI+D SKA+E P A +ERG + + AA +D + ++LD
Sbjct: 456 RGIVHREIGDKLEAIKDFSKAIEINPKYASAYYERGKTRYALNEKAAAKKDFTKVIELDS 515
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AY + +G K+A + + KAI+++ +A+ H ++ + + E A+E
Sbjct: 516 RFVDAYIARADVHTDLGYPKQAYDDYEKAIEMNPEDAKAYVHRGKYRFQMKDIEGAIENY 575
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
Q + ++ S AY+ RG LG+ KA+ D S + ++P Y R
Sbjct: 576 NQAIKLNSTQSTAYNNRGNAYLELGKWNKALADYSKAIELNPEYASAYYNRG 627
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 132/287 (45%), Gaps = 34/287 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---------------------- 424
+GIA + Y A+ +F Q +K +P Y A RG A
Sbjct: 320 QGIANYEKADYKQAVKLFSQAIKINPQYSSAYNFRGDAYYRLGNYEKSQQDSSAAIRNNP 379
Query: 425 --------RAFQR----ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
RAF E AI D+ +AI+ NP +A+ RG AR + E+ +AI DL
Sbjct: 380 QDANAYYDRAFSLYLVGEFNGAIIDYNQAIKLNPEYADAYYGRGLARHEIKENRKAIADL 439
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++A+ +P +RGIV+ + D A++D S ++++ + SAY G ++ E
Sbjct: 440 NQAIAIKPKFTKAYFQRGIVHREIGDKLEAIKDFSKAIEINPKYASAYYERGKTRYALNE 499
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
A++ K I+LD F++A+ + DL ++A + ++ + ++ +KAY RG
Sbjct: 500 KAAAKKDFTKVIELDSRFVDAYIARADVHTDLGYPKQAYDDYEKAIEMNPEDAKAYVHRG 559
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + AI++ + + ++ + R + Y +G++ +A+
Sbjct: 560 KYRFQMKDIEGAIENYNQAIKLNSTQSTAYNNRGNAYLELGKWNKAL 606
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 4/218 (1%)
Query: 361 EAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
E K N+K + ++++ +I F RGI G AI F + ++ +P Y A
Sbjct: 428 EIKENRK-AIADLNQAIAIKPKFTKAYFQRGIVHREIGDKLEAIKDFSKAIEINPKYASA 486
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
RG R E AA DFT+ I+ + +A+ R LG +A D KA+E
Sbjct: 487 YYERGKTRYALNEKAAAKKDFTKVIELDSRFVDAYIARADVHTDLGYPKQAYDDYEKAIE 546
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P A RG F+ KD A+E+ + +KL+ +AY G A +G++ KA
Sbjct: 547 MNPEDAKAYVHRGKYRFQMKDIEGAIENYNQAIKLNSTQSTAYNNRGNAYLELGKWNKAL 606
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ KAI+L+ + A+ + DLA A+E Q
Sbjct: 607 ADYSKAIELNPEYASAYYNRGLLRTDLAKVPGAIEDYQ 644
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 112/229 (48%)
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
+D Y L +G A + + + A+ F++AI+ NP A+ RG A LG ++
Sbjct: 309 KDLNYARKLYYQGIANYEKADYKQAVKLFSQAIKINPQYSSAYNFRGDAYYRLGNYEKSQ 368
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
QD S A+ P A+ ++R + +FN A+ D + +KL+ E AY GLA
Sbjct: 369 QDSSAAIRNNPQDANAYYDRAFSLYLVGEFNGAIIDYNQAIKLNPEYADAYYGRGLARHE 428
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
I E +KA +AI + F +A+ ++++ + +A++ + + I+ +++ AY+
Sbjct: 429 IKENRKAIADLNQAIAIKPKFTKAYFQRGIVHREIGDKLEAIKDFSKAIEINPKYASAYY 488
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
RG + L + A KD + + +D ++ RA + +G ++A
Sbjct: 489 ERGKTRYALNEKAAAKKDFTKVIELDSRFVDAYIARADVHTDLGYPKQA 537
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ + S VD ++R + G A +++ ++ +P +A + RG R ++
Sbjct: 508 TKVIELDSRFVDAYIARADVHTDLGYPKQAYDDYEKAIEMNPEDAKAYVHRGKYRFQMKD 567
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E AI ++ +AI+ N + A+ RG A LG+ +A+ D SKA+E P A + RG
Sbjct: 568 IEGAIENYNQAIKLNSTQSTAYNNRGNAYLELGKWNKALADYSKAIELNPEYASAYYNRG 627
Query: 491 IVNFKFKDFNAAVEDLSAC 509
++ A+ED A
Sbjct: 628 LLRTDLAKVPGAIEDYQAA 646
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 560 FYQDLANSEKA-----LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+YQ +AN EKA ++ Q + I+ ++S AY+ RG + LG ++K+ +D S+ +
Sbjct: 318 YYQGIANYEKADYKQAVKLFSQAIKINPQYSSAYNFRGDAYYRLGNYEKSQQDSSAAIRN 377
Query: 615 DPSNIECLYLRASCYHAIGEYREAVI 640
+P + Y RA + +GE+ A+I
Sbjct: 378 NPQDANAYYDRAFSLYLVGEFNGAII 403
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 34/159 (21%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A L+ +GI N++ D+ AV+ S +K++ + SAY + G A +G Y+K+++
Sbjct: 312 NYARKLYYQGIANYEKADYKQAVKLFSQAIKINPQYSSAYNFRGDAYYRLGNYEKSQQDS 371
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
AI RN N + A AY+ R L+ +G+
Sbjct: 372 SAAI---RN----------------NPQDA---------------NAYYDRAFSLYLVGE 397
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AI D + + ++P + Y R H I E R+A+
Sbjct: 398 FNGAIIDYNQAIKLNPEYADAYYGRGLARHEIKENRKAI 436
>gi|145519597|ref|XP_001445665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413120|emb|CAK78268.1| unnamed protein product [Paramecium tetraurelia]
Length = 681
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 129/264 (48%), Gaps = 1/264 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+K IS D+ +G + + AI + L + + +++ RG A R AI
Sbjct: 265 NKKIS-DWFHQQGFEARKKEDFIKAIEFYTMALMFNSNHFKSIFNRGFAFDKLRMYNDAI 323
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+D+T+A++ +P A+ RG + G+ AI+D +KA+E +P+ AD H +G K
Sbjct: 324 NDYTKAVEMDPKNAYAYYNRGISYDKKGDYNLAIKDFAKAIELDPSKADFYHNKGFAMKK 383
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
A+ + + C++LDK + AY +GE+ KA++ +L A + N
Sbjct: 384 KNQIKEAILEFNECLRLDKNHFKAYYNRANCYEKLGEFDKAQQDYLIANNVVPNNPNTLT 443
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
H+ E AL+ L ID ++ AY+ RGL+ +G+++KA D + + I+
Sbjct: 444 HIGILMDRQQKLEDALKYFNSSLKIDSNYAPAYNGRGLVYDKIGEYEKACIDFNKAIDIE 503
Query: 616 PSNIECLYLRASCYHAIGEYREAV 639
P N ++ R C ++ ++ +A+
Sbjct: 504 PQNPVYIHNRGCCKRSMNKFEQAL 527
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 131/611 (21%), Positives = 258/611 (42%), Gaps = 75/611 (12%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY---E 131
RA Y + ++ I+DC+K L+ D + Y L+GCA LG+ + A+ + K E
Sbjct: 48 RASAYIKKGEYEIAIQDCNKLLESDGDNVGGYYLRGCANEKLGQTDLAIDDFSKVLLLDE 107
Query: 132 HALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMS-SLTVSESGLNANDKMSETSE 190
+ ++ + L L+ A +D + E D + S++ S ++++ L N M + +
Sbjct: 108 NHVNAAFARASCLNLKGDFAGAIEDYTRALEKDNAKSLNLSNSINKRSLLRNSSMKK-DD 166
Query: 191 NHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREV 250
N+ K++ +++ + + DL N ++DE + ++ N +
Sbjct: 167 NYPKTEAFQYKTKTNKYQQ-----PEEDDLMNPQNDEEYLQNDQSQIQNQPQQNSFM--- 218
Query: 251 SENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDK--ASVNERHGRQTN-GTHDV 307
S+N +S + H R + I+++ S P+ + S+ H +Q N D
Sbjct: 219 SQNPLYTSIDANELHIQRPSQIIDKEISQ-------PVQQQLISMIPDHIKQDNKKISDW 271
Query: 308 HDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKK 367
+ ++ D E Y+ + + ++ S +R F +D L+ N+A +
Sbjct: 272 FHQQGFEARKKEDFIKAIEFYTMALMFNSNHFKSIFNR---GFAFDKLR-MYNDAIND-- 325
Query: 368 FCVTRISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
+K++ +D + +RGI+ +G Y AI F + ++ DP + +G
Sbjct: 326 -------YTKAVEMDPKNAYAYYNRGISYDKKGDYNLAIKDFAKAIELDPSKADFYHNKG 378
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD----------- 471
A + +++ AI +F E ++ + + +A+ R LGE +A QD
Sbjct: 379 FAMKKKNQIKEAILEFNECLRLDKNHFKAYYNRANCYEKLGEFDKAQQDYLIANNVVPNN 438
Query: 472 -----------------------LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
+ +L+ + N A + RG+V K ++ A D +
Sbjct: 439 PNTLTHIGILMDRQQKLEDALKYFNSSLKIDSNYAPAYNGRGLVYDKIGEYEKACIDFNK 498
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+ ++ +N G S+ ++++A E KA+ LD + ++ + + + E
Sbjct: 499 AIDIEPQNPVYIHNRGCCKRSMNKFEQALEDFKKALSLDSKNPIIYSNMGLVLRKMEDFE 558
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
A C Q L ++ + RG L LGQ ++AI D S + +DP NI +Y R C
Sbjct: 559 TAAYCYSQELIYSSENTRTLNNRGYCLAKLGQFEEAISDYSRAISLDPINIHAIYNRGIC 618
Query: 629 YHAIGEYREAV 639
IGE+ +A+
Sbjct: 619 NERIGEFHKAI 629
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 35/196 (17%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ--- 443
RG+ G+Y A F++ + +P P + RG + + E A+ DF +A+
Sbjct: 479 RGLVYDKIGEYEKACIDFNKAIDIEPQNPVYIHNRGCCKRSMNKFEQALEDFKKALSLDS 538
Query: 444 SNP-----------------SAGEAWKR--------------RGQARAALGESVEAIQDL 472
NP +A + + RG A LG+ EAI D
Sbjct: 539 KNPIIYSNMGLVLRKMEDFETAAYCYSQELIYSSENTRTLNNRGYCLAKLGQFEEAISDY 598
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DKENKSAYTYLGLALSSIG 531
S+A+ +P + ++ RGI N + +F+ A+ED S + L + + +AY G +IG
Sbjct: 599 SRAISLDPINIHAIYNRGICNERIGEFHKAIEDFSQVIHLQNDQGANAYFNRGCCYDNIG 658
Query: 532 EYKKAEEAHLKAIQLD 547
E A + KA+++D
Sbjct: 659 EMDLAIADYSKALEID 674
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 51 NWSKAIRILD-SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
++ KAI +L+ S + I NR F + +L ++ I D KA+++DP AY +
Sbjct: 284 DFIKAIEFYTMALMFNSNHFKSIFNRGFAFDKLRMYNDAINDYTKAVEMDPKNAYAYYNR 343
Query: 110 GCAFSALGRKEEALSVWEKGYE 131
G ++ G A+ + K E
Sbjct: 344 GISYDKKGDYNLAIKDFAKAIE 365
>gi|429123527|ref|ZP_19184060.1| hypothetical protein A966_04466 [Brachyspira hampsonii 30446]
gi|426280600|gb|EKV57611.1| hypothetical protein A966_04466 [Brachyspira hampsonii 30446]
Length = 352
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 153/299 (51%), Gaps = 3/299 (1%)
Query: 321 SNTNSESYSKSSISDNKSSDSTESRSKL-SFKWDMLKETSNEAKRNKKFCVTRISKSKSI 379
+N + E+YS + ++ E +K+ S K + +N A NKK + ++
Sbjct: 39 NNIDPENYSDFDDFNERAKTFNEELNKIISDKTYFIGSFTNIADNNKKVDIDSLNNLTDY 98
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D+ S+GI + G+YA AI +D+ +K +P +A +G ++A L+ AI ++
Sbjct: 99 H-DYN-SKGIHKSANGEYAEAIKYYDEAIKLNPNMADAYYNKGISKAKLGLLKEAIEEYD 156
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ P +A+ RG ++ LG EAI+D KAL +PN D + +G++ + F
Sbjct: 157 KAIKLKPDYADAYYNRGLIKSDLGFLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLF 216
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++D + +K+ ++ Y G + ++ Y+++ + + KAI+L+ + A+ +
Sbjct: 217 KEAIKDFNKAIKIADDDAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPYYASAYNNRGN 276
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
L E+A++ + + + ++ AY+ RG LG +K A+KD L +DP+N
Sbjct: 277 AKDSLGLYEEAIKDFDKAIELKPDYADAYNNRGYSKENLGLYKDALKDYKKALKLDPNN 335
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 17/233 (7%)
Query: 424 ARAFQRELEAAISDFTEAIQS-----------------NPSAGEAWKRRGQARAALGESV 466
A+ F EL ISD T I S N + + +G ++A GE
Sbjct: 56 AKTFNEELNKIISDKTYFIGSFTNIADNNKKVDIDSLNNLTDYHDYNSKGIHKSANGEYA 115
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ +A++ PN AD + +GI K A+E+ +KL + AY GL
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKGISKAKLGLLKEAIEEYDKAIKLKPDYADAYYNRGLI 175
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
S +G ++A + KA+ +D N +A+ + +L ++A++ + + I +
Sbjct: 176 KSDLGFLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKAIKIADDDAV 235
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y+ RG + L ++++IKD + ++P R + ++G Y EA+
Sbjct: 236 IYNNRGNSKYNLELYEESIKDYDKAIKLNPYYASAYNNRGNAKDSLGLYEEAI 288
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILK--EDPMYPEALI--GRGTARAF 427
K++S+D L ++G+ + G + AI F++ +K +D +A+I RG ++
Sbjct: 191 KALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKAIKIADD----DAVIYNNRGNSKYN 246
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E +I D+ +AI+ NP A+ RG A+ +LG EAI+D KA+E +P+ AD +
Sbjct: 247 LELYEESIKDYDKAIKLNPYYASAYNNRGNAKDSLGLYEEAIKDFDKAIELKPDYADAYN 306
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
RG + A++D +KLD N+ A
Sbjct: 307 NRGYSKENLGLYKDALKDYKKALKLDPNNEYA 338
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 19 TICEIDELVRVDSVMASAITAR-IELAKLCSLRN----WSKAIRILDSLLAQSYEIQDIC 73
I DE ++++ MA A + I AKL L+ + KAI+ L A +Y
Sbjct: 117 AIKYYDEAIKLNPNMADAYYNKGISKAKLGLLKEAIEEYDKAIK-LKPDYADAY-----Y 170
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L + I+D DKAL +DP L AY KG + LG +EA+ + K
Sbjct: 171 NRGLIKSDLGFLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKA 226
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI+I D + NR LEL++ I+D DKA++L+P AY
Sbjct: 219 AIKDFNKAIKIADD------DAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPYYASAYN 272
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G A +LG EEA+ ++K E
Sbjct: 273 NRGNAKDSLGLYEEAIKDFDKAIE 296
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
S++++ KAI+ L+ A +Y NR L L++ I+D DKA++L P AY
Sbjct: 253 SIKDYDKAIK-LNPYYASAYN-----NRGNAKDSLGLYEEAIKDFDKAIELKPDYADAYN 306
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G + LG ++AL ++K
Sbjct: 307 NRGYSKENLGLYKDALKDYKKA 328
>gi|186684862|ref|YP_001868058.1| hypothetical protein Npun_F4764 [Nostoc punctiforme PCC 73102]
gi|186467314|gb|ACC83115.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 630
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 43/298 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQ 443
L++G+ +G Y A + + Q +K +P + EA RG Q ++ AI+DF AI+
Sbjct: 31 LNQGLNHSLQGDYQEANAAYTQAIKLNPNFAEAYHNRGIILTDQLKDYRGAIADFNRAIE 90
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP+ A+ RG A LG+ AI D ++ALE +PN A H RG F + ++ A+
Sbjct: 91 INPNFATAYYHRGNAHYFLGDYQGAIADYNQALEIDPNLAQFYHSRGNAYFALEKYDKAI 150
Query: 504 ED----------LSACVKLDKENK--------------------------------SAYT 521
D L+ + +D N +AY+
Sbjct: 151 ADYIQTIETSTQLADNINIDIANAYHNRGVVCFEKGDRQGAIADFQQALQWYPNFAAAYS 210
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G +G +K+A H +A+QLD EA+ + + L N + A+ + L I+
Sbjct: 211 NRGNIHHILGNFKEAIADHDRALQLDPKLAEAYHNRGNAHYSLENYQSAIADYNRALEIN 270
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RF+ AY+ RGL+L L ++ +AI+D + L +P +++ R + +Y A+
Sbjct: 271 PRFAGAYYNRGLVLAHLKEYHRAIEDFNQALKFNPDDVQAYCERGLVRSTLEDYEGAI 328
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 7/254 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G AI+ F Q L+ P + A RG + AI+D A+Q +
Sbjct: 177 NRGVVCFEKGDRQGAIADFQQALQWYPNFAAAYSNRGNIHHILGNFKEAIADHDRALQLD 236
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG A +L AI D ++ALE P A + RG+V K+++ A+ED
Sbjct: 237 PKLAEAYHNRGNAHYSLENYQSAIADYNRALEINPRFAGAYYNRGLVLAHLKEYHRAIED 296
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + ++ AY GL S++ +Y+ A + +A+Q + +G + L
Sbjct: 297 FNQALKFNPDDVQAYCERGLVRSTLEDYEGAIADYDRALQENPTLALVYGFRANALRRLG 356
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+E ++L ++ ++ Y R LG HK AIKD L I+
Sbjct: 357 DYQGAIEDSNRLLQLNPSLAEGYCDRAAARRSLGDHKGAIKDYDRALQINDQ-------L 409
Query: 626 ASCYHAIGEYREAV 639
A+ Y+ G REA+
Sbjct: 410 AAAYYGRGIAREAL 423
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + AI+ D+ L+ DP EA RG A ++AI+D+ A++ NP A+
Sbjct: 220 GNFKEAIADHDRALQLDPKLAEAYHNRGNAHYSLENYQSAIADYNRALEINPRFAGAYYN 279
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A L E AI+D ++AL+F P+ ERG+V +D+ A+ D ++ +
Sbjct: 280 RGLVLAHLKEYHRAIEDFNQALKFNPDDVQAYCERGLVRSTLEDYEGAIADYDRALQENP 339
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y + AL +G+Y+ A E + +QL+ + E + + L + + A++
Sbjct: 340 TLALVYGFRANALRRLGDYQGAIEDSNRLLQLNPSLAEGYCDRAAARRSLGDHKGAIKDY 399
Query: 575 QQVLYIDKRFSKAYHLRGLL------LHG----------------------------LGQ 600
+ L I+ + + AY+ RG+ L G LG
Sbjct: 400 DRALQINDQLAAAYYGRGIAREALKDLQGAIDDNTQAIELVPEFSQAYCNRGNTRRLLGD 459
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI D + L I+P IE Y R S ++A+ Y A+
Sbjct: 460 EQGAIADYNQALKINPDLIEAYYNRGSTHYALEAYESAI 498
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 116/222 (52%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R A+ + G + AI +D+ L+ + A GRG AR ++L+ AI D T+AI+ P
Sbjct: 382 RAAARRSLGDHKGAIKDYDRALQINDQLAAAYYGRGIAREALKDLQGAIDDNTQAIELVP 441
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG R LG+ AI D ++AL+ P+ + + RG ++ + + +A+ D
Sbjct: 442 EFSQAYCNRGNTRRLLGDEQGAIADYNQALKINPDLIEAYYNRGSTHYALEAYESAIADY 501
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++++ ++ + Y+ A ++ +Y+ A E + +AI +D +F E W + + L +
Sbjct: 502 TQALQINPQSAAFYSDRANARYALEDYQGAIEDYSRAIAIDSSFAEDWYNRGRSRSLLGD 561
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ AL L Q L + ++ AY LR + LG + AI D
Sbjct: 562 LQGALTDLNQALQLQPHWASAYILRADVYQNLGDSQGAIADF 603
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 128/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + +Y AI F+Q LK +P +A RG R+ + E AI+D+ A+Q N
Sbjct: 279 NRGLVLAHLKEYHRAIEDFNQALKFNPDDVQAYCERGLVRSTLEDYEGAIADYDRALQEN 338
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + R A LG+ AI+D ++ L+ P+ A+ +R D A++D
Sbjct: 339 PTLALVYGFRANALRRLGDYQGAIEDSNRLLQLNPSLAEGYCDRAAARRSLGDHKGAIKD 398
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ + +AY G+A ++ + + A + + +AI+L F +A+ + + L
Sbjct: 399 YDRALQINDQLAAAYYGRGIAREALKDLQGAIDDNTQAIELVPEFSQAYCNRGNTRRLLG 458
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+ Q L I+ +AY+ RG + L ++ AI D + L I+P + R
Sbjct: 459 DEQGAIADYNQALKINPDLIEAYYNRGSTHYALEAYESAIADYTQALQINPQSAAFYSDR 518
Query: 626 ASCYHAIGEYREAV 639
A+ +A+ +Y+ A+
Sbjct: 519 ANARYALEDYQGAI 532
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 38/289 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQS 444
RG+ + Y AI+ +D+ L+E+P AL+ A A +R + + AI D +Q
Sbjct: 314 RGLVRSTLEDYEGAIADYDRALQENPTL--ALVYGFRANALRRLGDYQGAIEDSNRLLQL 371
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NPS E + R AR +LG+ AI+D +AL+ A + RGI KD A++
Sbjct: 372 NPSLAEGYCDRAAARRSLGDHKGAIKDYDRALQINDQLAAAYYGRGIAREALKDLQGAID 431
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---------- 554
D + ++L E AY G +G+ + A + +A++++ + +EA+
Sbjct: 432 DNTQAIELVPEFSQAYCNRGNTRRLLGDEQGAIADYNQALKINPDLIEAYYNRGSTHYAL 491
Query: 555 -------GHLTQ----------FYQDLANSEKALECLQ-------QVLYIDKRFSKAYHL 590
TQ FY D AN+ ALE Q + + ID F++ ++
Sbjct: 492 EAYESAIADYTQALQINPQSAAFYSDRANARYALEDYQGAIEDYSRAIAIDSSFAEDWYN 551
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG LG + A+ DL+ L + P LRA Y +G+ + A+
Sbjct: 552 RGRSRSLLGDLQGALTDLNQALQLQPHWASAYILRADVYQNLGDSQGAI 600
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 11/287 (3%)
Query: 364 RNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
++ + + +++ I+ +F + RG A G Y AI+ ++Q L+ DP +
Sbjct: 76 KDYRGAIADFNRAIEINPNFATAYYHRGNAHYFLGDYQGAIADYNQALEIDPNLAQFYHS 135
Query: 421 RGTARAFQRELEAAISDFTEAIQS--------NPSAGEAWKRRGQARAALGESVEAIQDL 472
RG A + + AI+D+ + I++ N A+ RG G+ AI D
Sbjct: 136 RGNAYFALEKYDKAIADYIQTIETSTQLADNINIDIANAYHNRGVVCFEKGDRQGAIADF 195
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+AL++ PN A RG ++ +F A+ D ++LD + AY G A S+
Sbjct: 196 QQALQWYPNFAAAYSNRGNIHHILGNFKEAIADHDRALQLDPKLAEAYHNRGNAHYSLEN 255
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y+ A + +A++++ F A+ + L +A+E Q L + +AY RG
Sbjct: 256 YQSAIADYNRALEINPRFAGAYYNRGLVLAHLKEYHRAIEDFNQALKFNPDDVQAYCERG 315
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L+ L ++ AI D L +P+ RA+ +G+Y+ A+
Sbjct: 316 LVRSTLEDYEGAIADYDRALQENPTLALVYGFRANALRRLGDYQGAI 362
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 112/236 (47%), Gaps = 9/236 (3%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA-ALGESVEAIQD 471
M E + +G + Q + + A + +T+AI+ NP+ EA+ RG L + AI D
Sbjct: 25 MNAEEFLNQGLNHSLQGDYQEANAAYTQAIKLNPNFAEAYHNRGIILTDQLKDYRGAIAD 84
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
++A+E PN A + RG ++ D+ A+ D + +++D Y G A ++
Sbjct: 85 FNRAIEINPNFATAYYHRGNAHYFLGDYQGAIADYNQALEIDPNLAQFYHSRGNAYFALE 144
Query: 532 EYKKAEEAHLKAIQ--------LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
+Y KA +++ I+ ++ + A+ + + + + A+ QQ L
Sbjct: 145 KYDKAIADYIQTIETSTQLADNINIDIANAYHNRGVVCFEKGDRQGAIADFQQALQWYPN 204
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
F+ AY RG + H LG K+AI D L +DP E + R + ++++ Y+ A+
Sbjct: 205 FAAAYSNRGNIHHILGNFKEAIADHDRALQLDPKLAEAYHNRGNAHYSLENYQSAI 260
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
AI+ ++Q LK +P EA RG+ E+AI+D+T+A+Q NP + + R A
Sbjct: 462 GAIADYNQALKINPDLIEAYYNRGSTHYALEAYESAIADYTQALQINPQSAAFYSDRANA 521
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
R AL + AI+D S+A+ + + A+ + RG D A+ DL+ ++L S
Sbjct: 522 RYALEDYQGAIEDYSRAIAIDSSFAEDWYNRGRSRSLLGDLQGALTDLNQALQLQPHWAS 581
Query: 519 AYTY-------LGLALSSIGEYKKAEEAHLK 542
AY LG + +I +++K+ + + +
Sbjct: 582 AYILRADVYQNLGDSQGAIADFQKSADLYYQ 612
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI + + + D + E RG +R+ +L+ A++D +A+Q P A+ R
Sbjct: 528 YQGAIEDYSRAIAIDSSFAEDWYNRGRSRSLLGDLQGALTDLNQALQLQPHWASAYILRA 587
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
LG+S AI D K SAD+ ++ G V +
Sbjct: 588 DVYQNLGDSQGAIADFQK-------SADLYYQEGNVQY 618
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QS 66
++ Y L I + + + ++ A A R + L L+ + +AI + L
Sbjct: 248 NAHYSLENYQSAIADYNRALEINPRFAGAYYNRGLV--LAHLKEYHRAIEDFNQALKFNP 305
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
++Q C R S LE ++ I D D+ALQ +PTL Y + A LG + A+
Sbjct: 306 DDVQAYCERGLVRSTLEDYEGAIADYDRALQENPTLALVYGFRANALRRLGDYQGAI 362
>gi|440680703|ref|YP_007155498.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428677822|gb|AFZ56588.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 233
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 5/212 (2%)
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
IFD I P + RG + Q + AI DF++AI +NP+ ++ RG A AAL
Sbjct: 4 IFDMIFGTSPSWR-----RGDQKLKQGDYTGAIKDFSQAIATNPNDSFSYCHRGSAYAAL 58
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ +AI+D ++A+ P+ + RGI D +ED + +D + Y
Sbjct: 59 GDHKKAIEDYTQAIRLSPSEPGFYNNRGISYCAVGDIERGIEDYKRVIHIDSSIPQGHRY 118
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG+A I +Y A +AIQ+D + A+ + Y L +AL+ L I
Sbjct: 119 LGIAYIKINKYDYAVRCLTRAIQIDSKYPSAYAYRGLAYTGLKKYAEALKDFDHALEIYP 178
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
++S+AY RG+L +G+ AI+DL G+
Sbjct: 179 QYSEAYKFRGMLYIEIGETSSAIEDLKKAAGL 210
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA + KY A+ + ++ D YP A RG A ++ A+ DF A++ P
Sbjct: 120 GIAYIKINKYDYAVRCLTRAIQIDSKYPSAYAYRGLAYTGLKKYAEALKDFDHALEIYPQ 179
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
EA+K RG +GE+ AI+DL KA N ++L ++ +++
Sbjct: 180 YSEAYKFRGMLYIEIGETSSAIEDLKKAAGLFFNQNNMLEQQNVLSL 226
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F +RGI+ G I + +++ D P+ G A + + A+ T AI
Sbjct: 81 FYNNRGISYCAVGDIERGIEDYKRVIHIDSSIPQGHRYLGIAYIKINKYDYAVRCLTRAI 140
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q + A+ RG A L + EA++D ALE P ++ RG++ + + ++A
Sbjct: 141 QIDSKYPSAYAYRGLAYTGLKKYAEALKDFDHALEIYPQYSEAYKFRGMLYIEIGETSSA 200
Query: 503 VEDLSACVKL 512
+EDL L
Sbjct: 201 IEDLKKAAGL 210
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G + AI + Q ++ P P RG + ++E I D+ I +
Sbjct: 51 RGSAYAALGDHKKAIEDYTQAIRLSPSEPGFYNNRGISYCAVGDIERGIEDYKRVIHIDS 110
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S + + G A + + A++ L++A++ + RG+ K + A++D
Sbjct: 111 SIPQGHRYLGIAYIKINKYDYAVRCLTRAIQIDSKYPSAYAYRGLAYTGLKKYAEALKDF 170
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+++ + AY + G+ IGE A E KA L N
Sbjct: 171 DHALEIYPQYSEAYKFRGMLYIEIGETSSAIEDLKKAAGLFFN 213
>gi|386001554|ref|YP_005919853.1| putative membrane protein, containing TPR repeats [Methanosaeta
harundinacea 6Ac]
gi|357209610|gb|AET64230.1| putative membrane protein, containing TPR repeats [Methanosaeta
harundinacea 6Ac]
Length = 463
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 130/254 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A G+Y A++ +D L+ DP Y A +G A + E A++ + +++ +
Sbjct: 37 NKGVALSELGRYEEAVASYDNALELDPEYALAWNNKGIALSALGRNEEALACYNRSLEID 96
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG ALG EA++ +ALE +P A +G V + D+N ++E
Sbjct: 97 PDYAPAWNNRGVVLEALGRGDEALESYDRALEVDPAYALAWSNQGGVFYSRGDYNRSIEC 156
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++D ++ A+ LG +L + GEY+++ E + +A+++D + AW + L
Sbjct: 157 YERALEIDPRSREAWNNLGRSLFAAGEYERSIEGYDEALKIDPLYATAWNNKGIALGTLG 216
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL+C ++ L I+ A + +G+ L LG+ ++A++ + L +DPS Y R
Sbjct: 217 RHQEALDCYEEALKIEPSHVMALYNKGIALGLLGRQEEAVECYDAVLKVDPSYPPAWYNR 276
Query: 626 ASCYHAIGEYREAV 639
+G +A
Sbjct: 277 GVALGLLGRQEQAA 290
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 122/231 (52%)
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+E+P+YP A +G A + E A++ + A++ +P AW +G A +ALG + EA
Sbjct: 26 EENPLYPLAWYNKGVALSELGRYEEAVASYDNALELDPEYALAWNNKGIALSALGRNEEA 85
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ +++LE +P+ A + RG+V + A+E +++D A++ G
Sbjct: 86 LACYNRSLEIDPDYAPAWNNRGVVLEALGRGDEALESYDRALEVDPAYALAWSNQGGVFY 145
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
S G+Y ++ E + +A+++D EAW +L + E+++E + L ID ++ A+
Sbjct: 146 SRGDYNRSIECYERALEIDPRSREAWNNLGRSLFAAGEYERSIEGYDEALKIDPLYATAW 205
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +G+ L LG+H++A+ L I+PS++ LY + +G EAV
Sbjct: 206 NNKGIALGTLGRHQEALDCYEEALKIEPSHVMALYNKGIALGLLGRQEEAV 256
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 122/245 (49%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y +I +++ L+ DP EA G + E E +I + EA++ +P AW
Sbjct: 148 GDYNRSIECYERALEIDPRSREAWNNLGRSLFAAGEYERSIEGYDEALKIDPLYATAWNN 207
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG EA+ +AL+ EP+ L+ +GI AVE A +K+D
Sbjct: 208 KGIALGTLGRHQEALDCYEEALKIEPSHVMALYNKGIALGLLGRQEEAVECYDAVLKVDP 267
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
A+ G+AL +G ++A ++ +A++LD + +AW + L E+AL+
Sbjct: 268 SYPPAWYNRGVALGLLGRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSY 327
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q+ L ID +S+A++ +G+ LG++++AI L +DP E + A+G
Sbjct: 328 QRALEIDPAYSQAWYNQGVAFSALGRYQEAISSYDRALELDPELSEAWNNKGIALSALGR 387
Query: 635 YREAV 639
++EA+
Sbjct: 388 HQEAI 392
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 3/191 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C K + V ++GIA G+ A+ +D +LK DP YP A RG A
Sbjct: 224 CYEEALKIEPSHVMALYNKGIALGLLGRQEEAVECYDAVLKVDPSYPPAWYNRGVALGLL 283
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E A + + EA++ +P +AW RG A +LG EA+Q +ALE +P + +
Sbjct: 284 GRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALEIDPAYSQAWYN 343
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G+ + A+ ++LD E A+ G+ALS++G +++A E + +A+++
Sbjct: 344 QGVAFSALGRYQEAISSYDRALELDPELSEAWNNKGIALSALGRHQEAIECYERALEVG- 402
Query: 549 NFLEAWGHLTQ 559
L + G+LT+
Sbjct: 403 --LASAGNLTK 411
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L + + DE +++D A A R I L L +L+++ +A+ I D +Q++
Sbjct: 283 LGRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALEI-DPAYSQAW 341
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
N+ +S L ++ I D+AL+LDP L +A+ KG A SALGR +EA+ +E
Sbjct: 342 -----YNQGVAFSALGRYQEAISSYDRALELDPELSEAWNNKGIALSALGRHQEAIECYE 396
Query: 128 KGYEHALHQSADLKQ 142
+ E L + +L +
Sbjct: 397 RALEVGLASAGNLTK 411
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N+ S+L ++ + D AL+LDP A+ KG A SALGR EEAL+ + + E
Sbjct: 37 NKGVALSELGRYEEAVASYDNALELDPEYALAWNNKGIALSALGRNEEALACYNRSLE 94
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR L + D+AL+LDP QA+ +G A +LGR+EEAL +++ E
Sbjct: 275 NRGVALGLLGRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALE 332
>gi|427730129|ref|YP_007076366.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
gi|427366048|gb|AFY48769.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
Length = 548
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 149/305 (48%), Gaps = 10/305 (3%)
Query: 315 SASLNDSNTNSESYSKSSIS--DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTR 372
++SL S N E K +IS +N S + +L+ + L + +K +
Sbjct: 218 NSSLLPSEPNQEQLLKPAISRPNNNHVSSYKQDEQLNLDYTKLGDEYF-SKGEYTVSINH 276
Query: 373 ISKSKSISV---DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+++ +++ + RG+A G Y +AI+ + Q++K + +A RG A +
Sbjct: 277 YNQALKLNINDSELYYKRGLAYYQIGNYEAAIADYSQVIKINLHDAKAYHKRGLALSQLG 336
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
EAAI D+TE+I+ NP A A+K R + R+ LG++ AI+D ++A++ P AD R
Sbjct: 337 AYEAAIDDYTESIRLNPHAAVAYKHRAEVRSYLGDNQGAIEDYTQAIKINPQYADTYKNR 396
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
GI + + ++L+ + +AY G A + IG+Y A E + +AIQ++
Sbjct: 397 GIARYIL----GTQPGFTQAIQLNPNDANAYKNRGNARADIGDYAGAIEDYTQAIQINPY 452
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A+ + DL ++E A++ Q + ++ ++ AY+ RG + L AI D
Sbjct: 453 LADAYYNRGNARYDLGDNEGAIDDYTQAIQVNPNYADAYYNRGNIYAELKNQPDAIADFQ 512
Query: 610 SGLGI 614
+ I
Sbjct: 513 TAADI 517
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 115/236 (48%), Gaps = 4/236 (1%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+Y +I+ ++Q LK + E RG A EAAI+D+++ I+ N +A+
Sbjct: 267 KGEYTVSINHYNQALKLNINDSELYYKRGLAYYQIGNYEAAIADYSQVIKINLHDAKAYH 326
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+RG A + LG AI D ++++ P++A R V D A+ED + +K++
Sbjct: 327 KRGLALSQLGAYEAAIDDYTESIRLNPHAAVAYKHRAEVRSYLGDNQGAIEDYTQAIKIN 386
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ Y G+A +G + +AIQL+ N A+ + D+ + A+E
Sbjct: 387 PQYADTYKNRGIARYILG----TQPGFTQAIQLNPNDANAYKNRGNARADIGDYAGAIED 442
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
Q + I+ + AY+ RG + LG ++ AI D + + ++P+ + Y R + Y
Sbjct: 443 YTQAIQINPYLADAYYNRGNARYDLGDNEGAIDDYTQAIQVNPNYADAYYNRGNIY 498
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ G F Q ++ +P A RG ARA + AI D+T+AIQ N
Sbjct: 395 NRGIARYILGTQPG----FTQAIQLNPNDANAYKNRGNARADIGDYAGAIEDYTQAIQIN 450
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG AR LG++ AI D ++A++ PN AD + RG + + K+ A+ D
Sbjct: 451 PYLADAYYNRGNARYDLGDNEGAIDDYTQAIQVNPNYADAYYNRGNIYAELKNQPDAIAD 510
Query: 506 LSACVKLDKE 515
+ ++
Sbjct: 511 FQTAADIYRQ 520
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%)
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
K D++ YT LG S GEY + + +A++L+ N E + Y + N E A
Sbjct: 248 KQDEQLNLDYTKLGDEYFSKGEYTVSINHYNQALKLNINDSELYYKRGLAYYQIGNYEAA 307
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
+ QV+ I+ +KAYH RGL L LG ++ AI D + + ++P RA
Sbjct: 308 IADYSQVIKINLHDAKAYHKRGLALSQLGAYEAAIDDYTESIRLNPHAAVAYKHRAEVRS 367
Query: 631 AIGEYREAV 639
+G+ + A+
Sbjct: 368 YLGDNQGAI 376
>gi|225621425|ref|YP_002722684.1| hypothetical protein BHWA1_02527 [Brachyspira hyodysenteriae WA1]
gi|225216246|gb|ACN84980.1| hypothetical protein BHWA1_02527 [Brachyspira hyodysenteriae WA1]
Length = 617
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 130/242 (53%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A+ + G + AI ++++++ D +A RG ++ + + + A+ DF +
Sbjct: 194 DAYYNRGVAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGVSKNYLQLFDEAMKDFNKI 253
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P+ A+ RG ++ LG EAI+D +KA+E PN +D + RG + F
Sbjct: 254 LELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKE 313
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ED +K + +AY G A + Y++A + + K I+LD N+++A+ +
Sbjct: 314 AIEDYDNAIKWKPNDINAYMSRGNAKYDLELYEEAMKDYDKIIKLDHNYVDAYYNRANAK 373
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
++L +++++ + +Y++ +S AY+ RGL LG +++AIKD + + N E
Sbjct: 374 RELGLYKESIKDYDKAIYLNPNYSDAYNNRGLSKSELGMYEEAIKDYEESIDLCADNPEA 433
Query: 622 LY 623
Y
Sbjct: 434 YY 435
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 144/294 (48%), Gaps = 34/294 (11%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D +RG+++ + A+ F++IL+ +P A RG ++ + AI D+
Sbjct: 226 NIDAYNNRGVSKNYLQLFDEAMKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYN 285
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ NP+ +A+ RG ++ LG EAI+D A++++PN + RG + + +
Sbjct: 286 KAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWKPNDINAYMSRGNAKYDLELY 345
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL-- 557
A++D +KLD AY A +G YK++ + + KAI L+ N+ +A+ +
Sbjct: 346 EEAMKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGL 405
Query: 558 -------------------------TQFYQDLANSEKALECLQQ-VLYIDK------RFS 585
+ Y ++ +++ L+ L+ + Y DK +S
Sbjct: 406 SKSELGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKDSIKYYDKAIELRPTYS 465
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AY+ RGL + LG +K+AIKD + ++P++ R +++G Y+EA+
Sbjct: 466 EAYNNRGLSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAI 519
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 127/258 (49%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG ++ G + AI +D +K P A + RG A+ E A+ D+ +
Sbjct: 296 DAYYNRGNSKKELGLFKEAIEDYDNAIKWKPNDINAYMSRGNAKYDLELYEEAMKDYDKI 355
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ + + +A+ R A+ LG E+I+D KA+ PN +D + RG+ + +
Sbjct: 356 IKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLSKSELGMYEE 415
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++D + L +N AY +G A + K + + + KAI+L + EA+ +
Sbjct: 416 AIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKDSIKYYDKAIELRPTYSEAYNNRGLSK 475
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
DL ++A++ + + ++ S Y+ RGL + LG +K+AIKD + + + P+
Sbjct: 476 NDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPNYTNA 535
Query: 622 LYLRASCYHAIGEYREAV 639
R S +G+Y+EA+
Sbjct: 536 YGNRGSAKDELGQYKEAI 553
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 131/254 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+ G+A N G Y AI + + + Y A RG AR + AI D+ +AI+ +
Sbjct: 130 TNGVALNNMGSYRYAIDKYSEAIDLIDYYALAYYNRGLARNNLGFFKKAIKDYDKAIELS 189
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG A+ G EAI+D +K +E + + D + RG+ + F+ A++D
Sbjct: 190 KNYKDAYYNRGVAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGVSKNYLQLFDEAMKD 249
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ N AY+ G + + +G YK+A E + KAI+++ N+ +A+ + ++L
Sbjct: 250 FNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELG 309
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+E + AY RG + L +++A+KD + +D + ++ Y R
Sbjct: 310 LFKEAIEDYDNAIKWKPNDINAYMSRGNAKYDLELYEEAMKDYDKIIKLDHNYVDAYYNR 369
Query: 626 ASCYHAIGEYREAV 639
A+ +G Y+E++
Sbjct: 370 ANAKRELGLYKESI 383
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 26/299 (8%)
Query: 337 KSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGK 396
K +D S+ + K+D+ E EA ++ +I K VD +R A+ G
Sbjct: 325 KPNDINAYMSRGNAKYDL--ELYEEAMKD----YDKIIKLDHNYVDAYYNRANAKRELGL 378
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I +D+ + +P Y +A RG +++ E AI D+ E+I EA+ G
Sbjct: 379 YKESIKDYDKAIYLNPNYSDAYNNRGLSKSELGMYEEAIKDYEESIDLCADNPEAYYNIG 438
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A+ L ++I+ KA+E P ++ + RG+ + A++D ++L+ +
Sbjct: 439 SAKYDLDLLKDSIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEAIKDYDKSIELNPND 498
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQFYQDLANSEK 569
+ Y GL S+G YK+A + + KAI+L N+ A+G+ L Q+ + + + +K
Sbjct: 499 SNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYDK 558
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP------SNIECL 622
A+E Y+ Y+ RG + G +K+A+KD L +DP SNIE L
Sbjct: 559 AIELAPNTAYL-------YNDRGWVKKNAGLYKEALKDYKKALELDPNNEYAKSNIESL 610
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 123/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N G + AI +D+ ++ Y +A RG A+ + AI D+ + I+ +
Sbjct: 164 NRGLARNNLGFFKKAIKDYDKAIELSKNYKDAYYNRGVAKNHAGLHKEAIEDYNKVIELD 223
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ RG ++ L EA++D +K LE EPN+ RG + A+ED
Sbjct: 224 NKNIDAYNNRGVSKNYLQLFDEAMKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIED 283
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY G + +G +K+A E + AI+ N + A+ DL
Sbjct: 284 YNKAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWKPNDINAYMSRGNAKYDLE 343
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A++ +++ +D + AY+ R LG +K++IKD + ++P+ + R
Sbjct: 344 LYEEAMKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNR 403
Query: 626 ASCYHAIGEYREAV 639
+G Y EA+
Sbjct: 404 GLSKSELGMYEEAI 417
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 135/270 (50%), Gaps = 10/270 (3%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL--- 431
K K ++ +SRG A+ + Y A+ +D+I+K D Y +A R A+ REL
Sbjct: 323 KWKPNDINAYMSRGNAKYDLELYEEAMKDYDKIIKLDHNYVDAYYNRANAK---RELGLY 379
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ +I D+ +AI NP+ +A+ RG +++ LG EAI+D ++++ ++ + + G
Sbjct: 380 KESIKDYDKAIYLNPNYSDAYNNRGLSKSELGMYEEAIKDYEESIDLCADNPEAYYNIGS 439
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ +++ ++L AY GL+ + +G YK+A + + K+I+L+ N
Sbjct: 440 AKYDLDLLKDSIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEAIKDYDKSIELNPNDS 499
Query: 552 EAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + LT++ L ++A++ + + + ++ AY RG LGQ+K+AIKD
Sbjct: 500 NTYNNRGLTKY--SLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYD 557
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + P+ R G Y+EA+
Sbjct: 558 KAIELAPNTAYLYNDRGWVKKNAGLYKEAL 587
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ K I+ LD +Y NRA +L L+K I+D DKA+ L+P AY
Sbjct: 348 AMKDYDKIIK-LDHNYVDAY-----YNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYN 401
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
+G + S LG EEA+ K YE ++ AD
Sbjct: 402 NRGLSKSELGMYEEAI----KDYEESIDLCAD 429
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
NR L L+K I+D KA++L P AY +G A LG+ +EA+ ++K E A
Sbjct: 504 NRGLTKYSLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYDKAIELA 563
>gi|124024559|ref|YP_001018866.1| hypothetical protein P9303_28711 [Prochlorococcus marinus str. MIT
9303]
gi|123964845|gb|ABM79601.1| Hypothetical protein P9303_28711 [Prochlorococcus marinus str. MIT
9303]
Length = 334
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 122/232 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ GI + G + AI+ F + ++ DP Y A RG A++ ++ + AI+D+ +AI+
Sbjct: 50 VNAGIEKGKRGDFKGAIADFTRAIEIDPQYARAYGNRGFAKSNLKDYQGAITDYKKAIEI 109
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG A++ L + AI D ++A+E P AD RG+ KD+ A+
Sbjct: 110 DPQYARAYFNRGFAKSNLKDYQGAIADFTRAIEINPQLADAYFNRGLAKDDLKDYQGAIA 169
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++++ + +AY GLA G+ + A KAI+++ + A+ + + DL
Sbjct: 170 DYTKAIEINPQYAAAYNNRGLAKVKSGDTQGAIADWGKAIEINPQYAAAYYNRGRAKYDL 229
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ + A+ + + I+ + + AY+ RGL L ++ AI D + + I+P
Sbjct: 230 KSYQAAIADYNKAIEINPQLAIAYYNRGLAKSDLQDYQAAIADYTKAIEINP 281
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 119/244 (48%), Gaps = 5/244 (2%)
Query: 376 SKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++I +D + +R G A+ N Y AI+ + + ++ DP Y A RG A++ ++
Sbjct: 70 TRAIEIDPQYARAYGNRGFAKSNLKDYQGAITDYKKAIEIDPQYARAYFNRGFAKSNLKD 129
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+DFT AI+ NP +A+ RG A+ L + AI D +KA+E P A + RG
Sbjct: 130 YQGAIADFTRAIEINPQLADAYFNRGLAKDDLKDYQGAIADYTKAIEINPQYAAAYNNRG 189
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K D A+ D ++++ + +AY G A + Y+ A + KAI+++
Sbjct: 190 LAKVKSGDTQGAIADWGKAIEINPQYAAAYYNRGRAKYDLKSYQAAIADYNKAIEINPQL 249
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + DL + + A+ + + I+ + S+ Y RG+ G K A D
Sbjct: 250 AIAYYNRGLAKSDLQDYQAAIADYTKAIEINPQLSRVYRNRGITKENNGDLKGACSDYKK 309
Query: 611 GLGI 614
+ +
Sbjct: 310 AVSL 313
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI+DFT AI+ +P A+ RG A++ L + AI D KA+E +P A R
Sbjct: 61 DFKGAIADFTRAIEIDPQYARAYGNRGFAKSNLKDYQGAITDYKKAIEIDPQYARAYFNR 120
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G KD+ A+ D + ++++ + AY GLA + +Y+ A + KAI+++
Sbjct: 121 GFAKSNLKDYQGAIADFTRAIEINPQLADAYFNRGLAKDDLKDYQGAIADYTKAIEINPQ 180
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ + +++ A+ + + I+ +++ AY+ RG + L ++ AI D +
Sbjct: 181 YAAAYNNRGLAKVKSGDTQGAIADWGKAIEINPQYAAAYYNRGRAKYDLKSYQAAIADYN 240
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ I+P Y R + +Y+ A+
Sbjct: 241 KAIEINPQLAIAYYNRGLAKSDLQDYQAAI 270
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG+A+ + Y AI+ + + ++ +P Y A RG A+ + + AI+D+ +
Sbjct: 148 ADAYFNRGLAKDDLKDYQGAIADYTKAIEINPQYAAAYNNRGLAKVKSGDTQGAIADWGK 207
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ NP A+ RG+A+ L AI D +KA+E P A + RG+ +D+
Sbjct: 208 AIEINPQYAAAYYNRGRAKYDLKSYQAAIADYNKAIEINPQLAIAYYNRGLAKSDLQDYQ 267
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
AA+ D + ++++ + Y G+ + G+ K A + KA+ L W
Sbjct: 268 AAIADYTKAIEINPQLSRVYRNRGITKENNGDLKGACSDYKKAVSLGNQGTTQW 321
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 58/120 (48%)
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G+ G++K A +AI++D + A+G+ +L + + A+ ++ +
Sbjct: 49 YVNAGIEKGKRGDFKGAIADFTRAIEIDPQYARAYGNRGFAKSNLKDYQGAITDYKKAIE 108
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
ID ++++AY RG L ++ AI D + + I+P + + R + +Y+ A+
Sbjct: 109 IDPQYARAYFNRGFAKSNLKDYQGAIADFTRAIEINPQLADAYFNRGLAKDDLKDYQGAI 168
>gi|67923685|ref|ZP_00517153.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
gi|67854485|gb|EAM49776.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
Length = 530
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 121/255 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G+ + +Y +AI+ +D+ L+ P Y A RG A A + AI+ + +A+Q
Sbjct: 246 FEKGLIHTQQAEYEAAIASYDKALQLTPDYDLAWNNRGIALANVGRFDKAIASYDKALQL 305
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW RG A G S EAI KAL+ +P+ + RG + + A+
Sbjct: 306 TPDKDEAWCNRGIALFNRGRSDEAIASFDKALQLKPDDHQAWNNRGYALRQLGRSDEAIA 365
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++L ++ A+ G AL +G + +A ++ KA+QL ++ EAW + + L
Sbjct: 366 SYDKALQLKPDDHQAWNNRGYALRQLGRFDEAIASYYKALQLKPDYYEAWHNRGIALRKL 425
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ + L + + +A+H RG+ L LG+ +AI L + P + + Y
Sbjct: 426 GRFDEAIASYDKALQLKPDYHQAWHNRGIALRKLGRFDEAIASYDKALQLKPDDHQAWYN 485
Query: 625 RASCYHAIGEYREAV 639
R +G EA+
Sbjct: 486 RGIALGNLGRLDEAI 500
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 8/290 (2%)
Query: 330 KSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS--- 386
K+ ++D+ + D T+ +S+L F+ ++ E + + K+ ++ D+ L+
Sbjct: 227 KAYLTDSPNLDPTK-QSELWFEKGLIHTQQAEYEA----AIASYDKALQLTPDYDLAWNN 281
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA N G++ AI+ +D+ L+ P EA RG A + + AI+ F +A+Q P
Sbjct: 282 RGIALANVGRFDKAIASYDKALQLTPDKDEAWCNRGIALFNRGRSDEAIASFDKALQLKP 341
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG A LG S EAI KAL+ +P+ + RG + F+ A+
Sbjct: 342 DDHQAWNNRGYALRQLGRSDEAIASYDKALQLKPDDHQAWNNRGYALRQLGRFDEAIASY 401
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L + A+ G+AL +G + +A ++ KA+QL ++ +AW + + L
Sbjct: 402 YKALQLKPDYYEAWHNRGIALRKLGRFDEAIASYDKALQLKPDYHQAWHNRGIALRKLGR 461
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++A+ + L + +A++ RG+ L LG+ +AI L + P
Sbjct: 462 FDEAIASYDKALQLKPDDHQAWYNRGIALGNLGRLDEAIASFDKALQLKP 511
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 81/190 (42%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
E W +G E AI KAL+ P+ + RGI F+ A+
Sbjct: 243 ELWFEKGLIHTQQAEYEAAIASYDKALQLTPDYDLAWNNRGIALANVGRFDKAIASYDKA 302
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++L + A+ G+AL + G +A + KA+QL + +AW + + L S++
Sbjct: 303 LQLTPDKDEAWCNRGIALFNRGRSDEAIASFDKALQLKPDDHQAWNNRGYALRQLGRSDE 362
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
A+ + L + +A++ RG L LG+ +AI L + P E + R
Sbjct: 363 AIASYDKALQLKPDDHQAWNNRGYALRQLGRFDEAIASYYKALQLKPDYYEAWHNRGIAL 422
Query: 630 HAIGEYREAV 639
+G + EA+
Sbjct: 423 RKLGRFDEAI 432
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G++ AI+ +D+ L+ P Y +A RG A + AI+ + +A+Q
Sbjct: 417 NRGIALRKLGRFDEAIASYDKALQLKPDYHQAWHNRGIALRKLGRFDEAIASYDKALQLK 476
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
P +AW RG A LG EAI KAL+ +P+ ++ R
Sbjct: 477 PDDHQAWYNRGIALGNLGRLDEAIASFDKALQLKPDEEIYINNR 520
>gi|428317099|ref|YP_007114981.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
7112]
gi|428240779|gb|AFZ06565.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
7112]
Length = 804
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 151/318 (47%), Gaps = 12/318 (3%)
Query: 327 SYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS 386
++ KS SSDS SR L ++ +L A F + S+ I
Sbjct: 362 AHKKSIAPSLMSSDSFYSR--LGSRFWLLILAGVGAAIVLIFLFSYWSRPNPIKAKEYYE 419
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ + A+A+ F++ ++ +P E+ RG A ++ + AI+D+++AI NP
Sbjct: 420 KGVEKSRNQDAAAALQAFNKSIQLNPKNAESFYWRGNANYDLKKYQEAIADYSQAIALNP 479
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG AR + AI+D ++AL +PN AD +ERG+ + +D+ A++D
Sbjct: 480 KYVQAYFNRGLARHDFNDKRGAIEDYTQALNLQPNDADTYYERGVTYLELQDYKTAIQDF 539
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+A ++L AY GLA + G+ + + +AI+LD ++A+ + L +
Sbjct: 540 NAVIRLQPNLVKAYHSRGLARAGSGDLQGGIGDYTEAIKLDAKNVDAFYSRGRARFHLGD 599
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID-----PSNIEC 621
+ AL QV+ ID + + AY R LG H+ AI D + + + P N C
Sbjct: 600 YQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQAAIDDCTQAISLSDEDGVPYNNRC 659
Query: 622 LYLRASCYHAIGEYREAV 639
+ Y + +Y +A+
Sbjct: 660 I-----AYLNLKDYPKAI 672
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 116/261 (44%), Gaps = 34/261 (13%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG+ + Y +AI F+ +++ P +A RG ARA +L+ I D+TEA
Sbjct: 517 DTYYERGVTYLELQDYKTAIQDFNAVIRLQPNLVKAYHSRGLARAGSGDLQGGIGDYTEA 576
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL--------------- 486
I+ + +A+ RG+AR LG+ A+ D S+ + +P SAD
Sbjct: 577 IKLDAKNVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQA 636
Query: 487 -------------------HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
+ R I KD+ A+ D + +K++ + +AY LA
Sbjct: 637 AIDDCTQAISLSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALAR 696
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
S+ G+ + A AI + N EA+ + + YQ+L N A+ Q + I ++ A
Sbjct: 697 SAGGDAQGAIADFTAAIGFNPNNAEAYANRAKIYQELKNYNSAIADYVQAIRISPNYAAA 756
Query: 588 YHLRGLLLHGLGQHKKAIKDL 608
Y+ RGL+ LG AI DL
Sbjct: 757 YYGRGLVRRSLGDKAGAISDL 777
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 133/322 (41%), Gaps = 39/322 (12%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKED 411
E E RN+ + +KSI ++ + + RG A + KY AI+ + Q + +
Sbjct: 419 EKGVEKSRNQDAAAALQAFNKSIQLNPKNAESFYWRGNANYDLKKYQEAIADYSQAIALN 478
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P Y +A RG AR + AI D+T+A+ P+ + + RG L + AIQD
Sbjct: 479 PKYVQAYFNRGLARHDFNDKRGAIEDYTQALNLQPNDADTYYERGVTYLELQDYKTAIQD 538
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ + +PN H RG+ D + D + +KLD +N A+ G A +G
Sbjct: 539 FNAVIRLQPNLVKAYHSRGLARAGSGDLQGGIGDYTEAIKLDAKNVDAFYSRGRARFHLG 598
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHL--TQF----------------------------- 560
+Y+ A + + I +D +A+ + TQ
Sbjct: 599 DYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQAAIDDCTQAISLSDEDGVPYNNR 658
Query: 561 ---YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
Y +L + KA+ Q L ++ AY+ R L G + AI D ++ +G +P+
Sbjct: 659 CIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALARSAGGDAQGAIADFTAAIGFNPN 718
Query: 618 NIECLYLRASCYHAIGEYREAV 639
N E RA Y + Y A+
Sbjct: 719 NAEAYANRAKIYQELKNYNSAI 740
>gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 466
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 141/305 (46%), Gaps = 35/305 (11%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C + + K + + +RG+A +G + S I FD+ ++ +P A RG +
Sbjct: 49 CWSSVLKLQPTNDAAFFNRGMAYTQKGDFTSGIHDFDETIRLNPE-GRAYDNRGNLYDQK 107
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E+E AISD+TEAI+ NP A+ +R G+S +AI D ++A++ P A+
Sbjct: 108 GEVEKAISDYTEAIKLNPKDAWAYAKRAADYHKKGDSEKAISDYTQAIQINPKDANYYDS 167
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG +D++ A+ D VKL+ + SAY GLA + G+ KA + I+L+
Sbjct: 168 RGRAYAMKRDWDKAIADYDQVVKLNPKQVSAYNSRGLAYAMKGDMDKAIRDLSEVIKLNP 227
Query: 549 NFLEAWGH--------------LTQF--------------------YQDLANSEKALECL 574
A+G ++ F YQ+ ++AL
Sbjct: 228 KDAPAYGSRGLSYAMKGDWDKAVSDFSELIKLKPTDSIGYDSRATAYQNQGKLDEALADF 287
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + ++ + + A+H RGL+ G G +KAI++ S + ++P + + R Y+ GE
Sbjct: 288 SEAIKLNDKDAGAFHNRGLIYVGKGDWEKAIENFSKSIQLNPQDADAFAKRGYAYYQKGE 347
Query: 635 YREAV 639
Y++ +
Sbjct: 348 YQKGI 352
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 115/233 (49%), Gaps = 4/233 (1%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AIS + Q ++ +P RG A A +R+ + AI+D+ + ++ NP A+ RG A
Sbjct: 147 AISDYTQAIQINPKDANYYDSRGRAYAMKRDWDKAIADYDQVVKLNPKQVSAYNSRGLAY 206
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
A G+ +AI+DLS+ ++ P A RG+ D++ AV D S +KL +
Sbjct: 207 AMKGDMDKAIRDLSEVIKLNPKDAPAYGSRGLSYAMKGDWDKAVSDFSELIKLKPTDSIG 266
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y A + G+ +A +AI+L+ A+ + Y + EKA+E + +
Sbjct: 267 YDSRATAYQNQGKLDEALADFSEAIKLNDKDAGAFHNRGLIYVGKGDWEKAIENFSKSIQ 326
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL----YLRASC 628
++ + + A+ RG + G+++K I D++ L ++P + E + RA+C
Sbjct: 327 LNPQDADAFAKRGYAYYQKGEYQKGIDDINEALRLNPKDAESYNNLAWFRATC 379
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A +G AI +++K +P A RG + A + + + A+SDF+E I+
Sbjct: 201 SRGLAYAMKGDMDKAIRDLSEVIKLNPKDAPAYGSRGLSYAMKGDWDKAVSDFSELIKLK 260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + R A G+ EA+ D S+A++ A H RG++ D+ A+E+
Sbjct: 261 PTDSIGYDSRATAYQNQGKLDEALADFSEAIKLNDKDAGAFHNRGLIYVGKGDWEKAIEN 320
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
S ++L+ ++ A+ G A GEY+K + +A++L+ E++ +L F
Sbjct: 321 FSKSIQLNPQDADAFAKRGYAYYQKGEYQKGIDDINEALRLNPKDAESYNNLAWF 375
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ V +G + AI F + ++ +P +A RG A + E + I D EA++ N
Sbjct: 303 NRGLIYVGKGDWEKAIENFSKSIQLNPQDADAFAKRGYAYYQKGEYQKGIDDINEALRLN 362
Query: 446 PSAGE-----AWKRRGQARAALGESVEAIQDLSKALEF 478
P E AW R A++ + EA++ KA E
Sbjct: 363 PKDAESYNNLAWFRATCPDASMRKGKEAVEAGKKACEL 400
>gi|307154454|ref|YP_003889838.1| hypothetical protein Cyan7822_4657 [Cyanothece sp. PCC 7822]
gi|306984682|gb|ADN16563.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 434
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 2/221 (0%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
IG+ +A ++ + AI +F++ I NP EA+ RG AR+ L + AI+D +KA+
Sbjct: 50 IGQSKLKA--KDYQGAIVEFSKVIAINPQISEAFNNRGLARSGLKDYRGAIEDYNKAISL 107
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
P A + RG+ + D +A+ED + + L+ + AYT G + +Y++A
Sbjct: 108 NPKEARYYNNRGLALHRSGDSKSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRRALA 167
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
H +A++LD A+ + +L N ++ LE ++ + +D + AY+ RG++ + L
Sbjct: 168 DHNQALRLDPKNATAYNNRGVTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNRGIVRYLL 227
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G + I+DL+ +DPS I+ RA+ + G Y+EA+
Sbjct: 228 GSYSGVIEDLNRSTSLDPSEIKPYGNRATVFDESGRYQEAI 268
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 116/246 (47%), Gaps = 5/246 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK I+++ ++S RG+A+ Y AI +++ + +P RG A +
Sbjct: 68 SKVIAINPQISEAFNNRGLARSGLKDYRGAIEDYNKAISLNPKEARYYNNRGLALHRSGD 127
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
++A+ D+ +AI NP EA+ RG R L + A+ D ++AL +P +A + RG
Sbjct: 128 SKSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRRALADHNQALRLDPKNATAYNNRG 187
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ +F +ED ++LD AY G+ +G Y E ++ LD +
Sbjct: 188 VTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNRGIVRYLLGSYSGVIEDLNRSTSLDPSE 247
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
++ +G+ + + ++A++ QV+ + + AY+ RG+ +G ++AI D
Sbjct: 248 IKPYGNRATVFDESGRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQ 307
Query: 611 GLGIDP 616
++P
Sbjct: 308 ATNLNP 313
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 5/245 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+IS++ +L+ RG + Y A++ +Q L+ DP A RG +
Sbjct: 136 NKAISLNPKLAEAYTNRGFIRDELRDYRRALADHNQALRLDPKNATAYNNRGVTLSNLGN 195
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ + DF AI+ +PS A+ RG R LG I+DL+++ +P+ R
Sbjct: 196 FQEGLEDFERAIRLDPSIAIAYNNRGIVRYLLGSYSGVIEDLNRSTSLDPSEIKPYGNRA 255
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
V + + A+++ S ++ + AY G+ + IG +++A + +++A L+
Sbjct: 256 TVFDESGRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQATNLNPRL 315
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
L + L N+E L+ Q + + S AYH RG + + L ++ AI+D +
Sbjct: 316 LITNFDVLLGRNPLKNAEAILQPFNQAIQENPVSSVAYHNRGNIRYQLKDYRGAIEDYTL 375
Query: 611 GLGID 615
+ D
Sbjct: 376 AIRFD 380
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 11/183 (6%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y AI + Q+++ P A GRG A + AI D+ +A NP
Sbjct: 262 GRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQATNLNPRLLITNFD 321
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R L + +Q ++A++ P S+ H RG + ++ KD+ A+ED + ++ D
Sbjct: 322 VLLGRNPLKNAEAILQPFNQAIQENPVSSVAYHNRGNIRYQLKDYRGAIEDYTLAIRFDN 381
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AY G+A +G+ K+ +A L+ + L Q +D A ++AL L
Sbjct: 382 NYALAYNNRGVARYQVGD-KQGAKADLQQAVI----------LFQQQKDAAKVQQALAVL 430
Query: 575 QQV 577
+
Sbjct: 431 NTI 433
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 115/295 (38%), Gaps = 68/295 (23%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G SA+ +++ + +P EA RG R R+ A++D +A++ +
Sbjct: 117 NRGLALHRSGDSKSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRRALADHNQALRLD 176
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG + LG E ++D +A+ +P+ A + RGIV + ++ +ED
Sbjct: 177 PKNATAYNNRGVTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNRGIVRYLLGSYSGVIED 236
Query: 506 LSACVKLD--------------------------------KENKSAYTYLGLAL--SSIG 531
L+ LD ++ K A+ Y G + + IG
Sbjct: 237 LNRSTSLDPSEIKPYGNRATVFDESGRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIG 296
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ---------VLY--- 579
+++A + +++A L+ L + L N+E L+ Q V Y
Sbjct: 297 SFQQAIDDYIQATNLNPRLLITNFDVLLGRNPLKNAEAILQPFNQAIQENPVSSVAYHNR 356
Query: 580 ----------------------IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
D ++ AY+ RG+ + +G + A DL +
Sbjct: 357 GNIRYQLKDYRGAIEDYTLAIRFDNNYALAYNNRGVARYQVGDKQGAKADLQQAV 411
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
+L +++KAI L+ LA++Y NR F +L ++ + D ++AL+LDP AY
Sbjct: 130 SALEDYNKAIS-LNPKLAEAY-----TNRGFIRDELRDYRRALADHNQALRLDPKNATAY 183
Query: 107 ILKGCAFSALGRKEEALSVWEK 128
+G S LG +E L +E+
Sbjct: 184 NNRGVTLSNLGNFQEGLEDFER 205
>gi|268324093|emb|CBH37681.1| hypothetical protein, containing TPR repeats [uncultured archaeon]
gi|268326410|emb|CBH39998.1| hypothetical membrane protein, containing TPR repeats [uncultured
archaeon]
Length = 739
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 129/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A G+Y AI+ D+ ++ +P + EA +G A E AI+ +AI++N
Sbjct: 436 NKGAALGKLGRYEEAIAACDKAIEINPQFAEAWNNKGAALGKLGRYEEAIAACDKAIETN 495
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW +G A + LG+ EAI KA+E A +GI + A+
Sbjct: 496 PQYAEAWNNKGLALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLGRYEEAIAA 555
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ + A+ G+ALS +G+Y++A AH KAI+++ + AW + + L
Sbjct: 556 CDNAIEINPRDAEAWNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLG 615
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + + I+ ++++A++ +G+ L LG+++ AI + + I+P + +
Sbjct: 616 RYEEAIAAYDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNAIEINPQYADAWTNK 675
Query: 626 ASCYHAIGEYREAV 639
+G Y EA+
Sbjct: 676 GVALSDLGRYEEAI 689
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 132/268 (49%), Gaps = 5/268 (1%)
Query: 377 KSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I ++ + +R G+A + G+ AI+ +D+ ++ +P + A +G A
Sbjct: 388 KAIEINSQYARAWNNKGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRY 447
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+ +AI+ NP EAW +G A LG EAI KA+E P A+ + +G+
Sbjct: 448 EEAIAACDKAIEINPQFAEAWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGL 507
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A+ ++++ + A+T G+AL +G Y++A A AI+++
Sbjct: 508 ALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLGRYEEAIAACDNAIEINPRDA 567
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EAW + L E+A+ + + I+ +++ A++ +G+ L GLG++++AI
Sbjct: 568 EAWNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLGRYEEAIAAYDEA 627
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ I+P E + +G+Y A+
Sbjct: 628 VEINPQYAEAWNNKGIALCHLGKYEGAI 655
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 123/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A + G+Y AI+ D+ ++ + Y A +G A E AI+ + +AI+ N
Sbjct: 368 NKGAALRDLGRYEEAIAAHDKAIEINSQYARAWNNKGVALCDLGRNEEAIAAYDKAIEIN 427
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G A LG EAI KA+E P A+ + +G K + A+
Sbjct: 428 PQFAGAWNNKGAALGKLGRYEEAIAACDKAIEINPQFAEAWNNKGAALGKLGRYEEAIAA 487
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + + A+ GLALS +G+Y++A AH KAI+++ + AW + L
Sbjct: 488 CDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLG 547
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + I+ R ++A++ +G+ L GLG++++AI + I+ +
Sbjct: 548 RYEEAIAACDNAIEINPRDAEAWNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNK 607
Query: 626 ASCYHAIGEYREAV 639
+G Y EA+
Sbjct: 608 GVALRGLGRYEEAI 621
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI+ F++ ++ P EA +G A E AI+ +AI+ N AW
Sbjct: 343 GKYEEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAWNN 402
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG + EAI KA+E P A + +G K + A+ ++++
Sbjct: 403 KGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAIAACDKAIEINP 462
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G AL +G Y++A A KAI+ + + EAW + L E+A+
Sbjct: 463 QFAEAWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAH 522
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + I+ +++ A+ +G+ L LG++++AI + + I+P + E + +G+
Sbjct: 523 DKAIEINSQYAGAWTNKGIALCHLGRYEEAIAACDNAIEINPRDAEAWNNKGVALSGLGK 582
Query: 635 YREAV 639
Y EA+
Sbjct: 583 YEEAI 587
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 121/253 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A G+Y AI+ D+ ++ +P Y EA +G A + + E AI+ +AI+ N
Sbjct: 470 NKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAHDKAIEIN 529
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
AW +G A LG EAI A+E P A+ + +G+ + A+
Sbjct: 530 SQYAGAWTNKGIALCHLGRYEEAIAACDNAIEINPRDAEAWNNKGVALSGLGKYEEAIAA 589
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ + A+ G+AL +G Y++A A+ +A++++ + EAW + L
Sbjct: 590 HDKAIEINSQYAGAWNNKGVALRGLGRYEEAIAAYDEAVEINPQYAEAWNNKGIALCHLG 649
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E A+ + I+ +++ A+ +G+ L LG++++AI + + I+P E +
Sbjct: 650 KYEGAIAAYDNAIEINPQYADAWTNKGVALSDLGRYEEAIAAYDNAIEINPQLAEAWNNK 709
Query: 626 ASCYHAIGEYREA 638
G Y EA
Sbjct: 710 GVVLGWSGRYEEA 722
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 115/232 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A GKY AI+ D+ ++ + Y A +G A E AI+ AI+ N
Sbjct: 504 NKGLALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLGRYEEAIAACDNAIEIN 563
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW +G A + LG+ EAI KA+E A + +G+ + A+
Sbjct: 564 PRDAEAWNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLGRYEEAIAA 623
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+++ + A+ G+AL +G+Y+ A A+ AI+++ + +AW + DL
Sbjct: 624 YDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNAIEINPQYADAWTNKGVALSDLG 683
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
E+A+ + I+ + ++A++ +G++L G++++A + IDP+
Sbjct: 684 RYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSGRYEEAKEAFEKAHEIDPT 735
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 5/268 (1%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K++ +D + + +GI G+ AI+ +D+ ++ + Y +A +G +
Sbjct: 286 KAVEIDPQYAQIWNNKGIVLGKLGRNEEAIAAYDKAIEINSQYAKAWNNKGATLGKLGKY 345
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+ F +AI+ P EAW +G A LG EAI KA+E A + +G+
Sbjct: 346 EEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAWNNKGV 405
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
A+ ++++ + A+ G AL +G Y++A A KAI+++ F
Sbjct: 406 ALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAIAACDKAIEINPQFA 465
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EAW + L E+A+ + + + ++++A++ +GL L GLG++++AI
Sbjct: 466 EAWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAHDKA 525
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ I+ + +G Y EA+
Sbjct: 526 IEINSQYAGAWTNKGIALCHLGRYEEAI 553
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 114/239 (47%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
+ D+ ++ DP Y + +G E AI+ + +AI+ N +AW +G
Sbjct: 281 LQYLDKAVEIDPQYAQIWNNKGIVLGKLGRNEEAIAAYDKAIEINSQYAKAWNNKGATLG 340
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
LG+ EAI +KA+E +P A+ + +G + A+ ++++ + A+
Sbjct: 341 KLGKYEEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAW 400
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G+AL +G ++A A+ KAI+++ F AW + L E+A+ + + I
Sbjct: 401 NNKGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAIAACDKAIEI 460
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +F++A++ +G L LG++++AI + +P E + +G+Y EA+
Sbjct: 461 NPQFAEAWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAI 519
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 101/213 (47%)
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
F L ++ +A++ +P + W +G LG + EAI KA+E A
Sbjct: 273 FNSNLNKSLQYLDKAVEIDPQYAQIWNNKGIVLGKLGRNEEAIAAYDKAIEINSQYAKAW 332
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +G K + A+ + +++ + A+ G AL +G Y++A AH KAI++
Sbjct: 333 NNKGATLGKLGKYEEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEI 392
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + AW + DL +E+A+ + + I+ +F+ A++ +G L LG++++AI
Sbjct: 393 NSQYARAWNNKGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAIA 452
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ I+P E + + +G Y EA+
Sbjct: 453 ACDKAIEINPQFAEAWNNKGAALGKLGRYEEAI 485
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 117/533 (21%), Positives = 218/533 (40%), Gaps = 78/533 (14%)
Query: 51 NWSKAIRILDSLLAQSYE--IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYIL 108
N++ AI S A+ YE +C A CY ++ DKA+++DP Q +
Sbjct: 243 NFTSAITFFTS--AKDYENCSSTLCYIASCYYFNSNLNKSLQYLDKAVEIDPQYAQIWNN 300
Query: 109 KGCAFSALGRKEEALSVWEKG------YEHAL-HQSADLKQFLELEELLTAAKQDRSV-- 159
KG LGR EEA++ ++K Y A ++ A L + + EE + A + +
Sbjct: 301 KGIVLGKLGRNEEAIAAYDKAIEINSQYAKAWNNKGATLGKLGKYEEAIAAFNKAIEIKP 360
Query: 160 TCEYDVSN---SMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSH 216
C +N ++ L E + A+DK E + + + + ++ V+
Sbjct: 361 QCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYAR------AWNNKGVA-------- 406
Query: 217 DPDLCN-GRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDG-----SKSTHASRDA 270
LC+ GR++EA + + IN + + N+ G++ G ++ A A
Sbjct: 407 ---LCDLGRNEEA-----IAAYDKAIEINPQFAG-AWNNKGAALGKLGRYEEAIAACDKA 457
Query: 271 SEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSD---SASLNDSNTNSES 327
EIN Q ++ ++ +K + + GR + ++ + + N+
Sbjct: 458 IEINPQFAEAWN------NKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSG 511
Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK--------SI 379
K + + E S+ + W NK + + + + +I
Sbjct: 512 LGKYEEAIAAHDKAIEINSQYAGAW-----------TNKGIALCHLGRYEEAIAACDNAI 560
Query: 380 SVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
++ R + +G+A GKY AI+ D+ ++ + Y A +G A E A
Sbjct: 561 EINPRDAEAWNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLGRYEEA 620
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+ + EA++ NP EAW +G A LG+ AI A+E P AD +G+
Sbjct: 621 IAAYDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNAIEINPQYADAWTNKGVALS 680
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ A+ ++++ + A+ G+ L G Y++A+EA KA ++D
Sbjct: 681 DLGRYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSGRYEEAKEAFEKAHEID 733
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
L + + I D+ + ++S A A + LC L +AI D + + +
Sbjct: 376 LGRYEEAIAAHDKAIEINSQYARAWNNK--GVALCDLGRNEEAIAAYDKAIEINPQFAGA 433
Query: 73 CN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N + +L ++ I CDKA++++P +A+ KG A LGR EEA++ +K E
Sbjct: 434 WNNKGAALGKLGRYEEAIAACDKAIEINPQFAEAWNNKGAALGKLGRYEEAIAACDKAIE 493
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD- 71
L + + I DE V ++ A A + LC L + AI D+ + + + D
Sbjct: 614 LGRYEEAIAAYDEAVEINPQYAEAWNNK--GIALCHLGKYEGAIAAYDNAIEINPQYADA 671
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N+ S L ++ I D A++++P L +A+ KG GR EEA +EK +E
Sbjct: 672 WTNKGVALSDLGRYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSGRYEEAKEAFEKAHE 731
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
L + + I D+ + ++ A A + A L L + +AI D + + + +
Sbjct: 410 LGRNEEAIAAYDKAIEINPQFAGAWNNK--GAALGKLGRYEEAIAACDKAIEINPQFAEA 467
Query: 73 CN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N + +L ++ I CDKA++ +P +A+ KG A S LG+ EEA++ +K E
Sbjct: 468 WNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAHDKAIE 527
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLL-AQSYEIQD 71
L K + I D+ + ++S A A T + LC L + +AI D+ + + +
Sbjct: 512 LGKYEEAIAAHDKAIEINSQYAGAWTNK--GIALCHLGRYEEAIAACDNAIEINPRDAEA 569
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N+ S L ++ I DKA++++ A+ KG A LGR EEA++ +++ E
Sbjct: 570 WNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLGRYEEAIAAYDEAVE 629
>gi|357415668|ref|YP_004927403.1| Tetratricopeptide TPR_1 repeat-containing protein [Streptomyces
flavogriseus ATCC 33331]
gi|320013204|gb|ADW08052.1| Tetratricopeptide TPR_1 repeat-containing protein [Streptomyces
flavogriseus ATCC 33331]
Length = 1261
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 121/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y A++ L+ DP Y AL RG A + A++D+T A++ +
Sbjct: 819 ARGETHRQAGRYDEAVTDLTATLELDPTYAAALGSRGDAHKQASRYDEAVTDYTAALELD 878
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A RG A G EA+ DL+ ALE +P +A + RG + + ++ AV D
Sbjct: 879 PTYATALGSRGDAHRQAGRYDEAVTDLTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTD 938
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+A ++LD A G G Y++A + A++LD A G Q +Q
Sbjct: 939 LTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTNAWAIGSRGQAHQQAG 998
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ L L +D + A RG G++++A+ D ++ L +DP++ L R
Sbjct: 999 RYDEAVTDLTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTDDWALAQR 1058
Query: 626 ASCYHAIGEYREAV 639
+ G Y +A+
Sbjct: 1059 GETHRQAGRYEQAI 1072
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A +Y A++ + L+ DP Y AL RG A + A++D T A++ +
Sbjct: 853 SRGDAHKQASRYDEAVTDYTAALELDPTYATALGSRGDAHRQAGRYDEAVTDLTAALELD 912
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A RGQA G EA+ DL+ ALE +P L RG + + + AV D
Sbjct: 913 PTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDPTLTWALGARGETHQQAGRYEQAVAD 972
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+A ++LD N A G A G Y +A A++LD A G + +Q
Sbjct: 973 YTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDPTLTWALGARGETHQQAG 1032
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ L +D A RG G++++AI D ++ L +DP++ L R
Sbjct: 1033 RYEQAVADYTAALELDPTDDWALAQRGETHRQAGRYEQAITDYTAALELDPTDAWALGSR 1092
Query: 626 ASCYHAIGEYREAV 639
+ G Y +AV
Sbjct: 1093 GQAHQQAGRYEQAV 1106
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 117/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y A++ + L+ DP Y AL RG A E A++D T A++ +
Sbjct: 683 ARGETHRQAGRYDEAVTDYTAALELDPTYATALGARGQAHQQAGRHEQAVTDLTAALELD 742
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A RG G EA+ DL+ ALE +P A L RG + + ++ AV D
Sbjct: 743 PTYAAALGARGDTHRLAGRYDEAVTDLTAALELDPTYAAALGARGDTHRQAGRYDEAVTD 802
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+A ++LD +A G G Y +A ++LD + A G ++ +
Sbjct: 803 YTAALELDPTYATALGARGETHRQAGRYDEAVTDLTATLELDPTYAAALGSRGDAHKQAS 862
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ L +D ++ A RG G++ +A+ DL++ L +DP+N + R
Sbjct: 863 RYDEAVTDYTAALELDPTYATALGSRGDAHRQAGRYDEAVTDLTAALELDPTNAWAIGSR 922
Query: 626 ASCYHAIGEYREAV 639
+ G Y EAV
Sbjct: 923 GQAHQQAGRYDEAV 936
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 8/288 (2%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKED 411
ET +A RN++ + ++ +D L+ RG G+Y A++ + L+ D
Sbjct: 618 ETHQQAGRNQEAVA---DLTAALELDPTLTWALGARGDTHRQAGRYDEAVTDYTAALELD 674
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P AL RG + A++D+T A++ +P+ A RGQA G +A+ D
Sbjct: 675 PTLTWALGARGETHRQAGRYDEAVTDYTAALELDPTYATALGARGQAHQQAGRHEQAVTD 734
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
L+ ALE +P A L RG + ++ AV DL+A ++LD +A G G
Sbjct: 735 LTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAALELDPTYAAALGARGDTHRQAG 794
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
Y +A + A++LD + A G + ++ ++A+ L L +D ++ A R
Sbjct: 795 RYDEAVTDYTAALELDPTYATALGARGETHRQAGRYDEAVTDLTATLELDPTYAAALGSR 854
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G ++ +A+ D ++ L +DP+ L R + G Y EAV
Sbjct: 855 GDAHKQASRYDEAVTDYTAALELDPTYATALGSRGDAHRQAGRYDEAV 902
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 117/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y A++ L+ DP Y AL RG + A++D+T A++ +
Sbjct: 751 ARGDTHRLAGRYDEAVTDLTAALELDPTYAAALGARGDTHRQAGRYDEAVTDYTAALELD 810
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A RG+ G EA+ DL+ LE +P A L RG + + ++ AV D
Sbjct: 811 PTYATALGARGETHRQAGRYDEAVTDLTATLELDPTYAAALGSRGDAHKQASRYDEAVTD 870
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+A ++LD +A G A G Y +A A++LD A G Q +Q
Sbjct: 871 YTAALELDPTYATALGSRGDAHRQAGRYDEAVTDLTAALELDPTNAWAIGSRGQAHQQAG 930
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ L L +D + A RG G++++A+ D ++ L +DP+N + R
Sbjct: 931 RYDEAVTDLTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTNAWAIGSR 990
Query: 626 ASCYHAIGEYREAV 639
+ G Y EAV
Sbjct: 991 GQAHQQAGRYDEAV 1004
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 114/254 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y A++ + L+ DP Y AL RG + A++D T ++ +
Sbjct: 785 ARGDTHRQAGRYDEAVTDYTAALELDPTYATALGARGETHRQAGRYDEAVTDLTATLELD 844
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A RG A EA+ D + ALE +P A L RG + + ++ AV D
Sbjct: 845 PTYAAALGSRGDAHKQASRYDEAVTDYTAALELDPTYATALGSRGDAHRQAGRYDEAVTD 904
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+A ++LD N A G A G Y +A A++LD A G + +Q
Sbjct: 905 LTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDPTLTWALGARGETHQQAG 964
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ L +D + A RG G++ +A+ DL++ L +DP+ L R
Sbjct: 965 RYEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDPTLTWALGAR 1024
Query: 626 ASCYHAIGEYREAV 639
+ G Y +AV
Sbjct: 1025 GETHQQAGRYEQAV 1038
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 151/356 (42%), Gaps = 7/356 (1%)
Query: 290 KASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDST---ESRS 346
+ +++ GR D+ L D +++ ++ D +D T E
Sbjct: 616 RGETHQQAGRNQEAVADLTAALELDPTLTWALGARGDTHRQAGRYDEAVTDYTAALELDP 675
Query: 347 KLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISI 403
L++ ET +A R + VT + + + + + RG A G++ A++
Sbjct: 676 TLTWALGARGETHRQAGRYDE-AVTDYTAALELDPTYATALGARGQAHQQAGRHEQAVTD 734
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
L+ DP Y AL RG + A++D T A++ +P+ A RG G
Sbjct: 735 LTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAALELDPTYAAALGARGDTHRQAG 794
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
EA+ D + ALE +P A L RG + + ++ AV DL+A ++LD +A
Sbjct: 795 RYDEAVTDYTAALELDPTYATALGARGETHRQAGRYDEAVTDLTATLELDPTYAAALGSR 854
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G A Y +A + A++LD + A G ++ ++A+ L L +D
Sbjct: 855 GDAHKQASRYDEAVTDYTAALELDPTYATALGSRGDAHRQAGRYDEAVTDLTAALELDPT 914
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ A RG G++ +A+ DL++ L +DP+ L R + G Y +AV
Sbjct: 915 NAWAIGSRGQAHQQAGRYDEAVTDLTAALELDPTLTWALGARGETHQQAGRYEQAV 970
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 140/636 (22%), Positives = 245/636 (38%), Gaps = 53/636 (8%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QSYEI 69
YR ++ + + E D + ++ A A R E +L L N +A+ L + L +
Sbjct: 553 YRSDQDEEALTEFDRAIAHNARNALAWARRGEEHRL--LGNEDQAVADLTAALELEPTNA 610
Query: 70 QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
+ +R + Q ++ + D AL+LDPTL A +G GR +EA++
Sbjct: 611 WALGSRGETHQQAGRNQEAVADLTAALELDPTLTWALGARGDTHRQAGRYDEAVT----- 665
Query: 130 YEHALHQSADLKQFLELEELLTAAKQDRSVT----CEYD--VSNSMSSLTVSES---GLN 180
D LEL+ LT A R T YD V++ ++L + + L
Sbjct: 666 ---------DYTAALELDPTLTWALGARGETHRQAGRYDEAVTDYTAALELDPTYATALG 716
Query: 181 ANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEAKGGSSVPVSKS 239
A + + + H ++ +++ D + + + D GR DEA + +
Sbjct: 717 ARGQAHQQAGRHEQAVTDLTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAAL--- 773
Query: 240 GLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSD-------DFDICNGPIDKAS 292
E+ + + TH R A + +D D +
Sbjct: 774 ---------ELDPTYAAALGARGDTH--RQAGRYDEAVTDYTAALELDPTYATALGARGE 822
Query: 293 VNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKW 352
+ + GR D+ L D + +++ ++S D +D T +
Sbjct: 823 THRQAGRYDEAVTDLTATLELDPTYAAALGSRGDAHKQASRYDEAVTDYTAALELDPTYA 882
Query: 353 DMLKETSNEAKRNKKF--CVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQI 407
L + ++ ++ VT ++ + + SRG A G+Y A++
Sbjct: 883 TALGSRGDAHRQAGRYDEAVTDLTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAA 942
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
L+ DP AL RG E A++D+T A++ +P+ A RGQA G E
Sbjct: 943 LELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRYDE 1002
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A+ DL+ ALE +P L RG + + + AV D +A ++LD + A G
Sbjct: 1003 AVTDLTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTDDWALAQRGETH 1062
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
G Y++A + A++LD A G Q +Q E+A+ L L +D A
Sbjct: 1063 RQAGRYEQAITDYTAALELDPTDAWALGSRGQAHQQAGRYEQAVTDLTAALELDPTLDWA 1122
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
R G ++A D+ P ++EC +
Sbjct: 1123 LASRSQAHRQAGHREEARMDVEQATEAHPDDLECAF 1158
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 113/253 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI + A++ FD+ + + A RG + A++D T A++ P
Sbjct: 548 RGILLYRSDQDEEALTEFDRAIAHNARNALAWARRGEEHRLLGNEDQAVADLTAALELEP 607
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A RG+ G + EA+ DL+ ALE +P L RG + + ++ AV D
Sbjct: 608 TNAWALGSRGETHQQAGRNQEAVADLTAALELDPTLTWALGARGDTHRQAGRYDEAVTDY 667
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+A ++LD A G G Y +A + A++LD + A G Q +Q
Sbjct: 668 TAALELDPTLTWALGARGETHRQAGRYDEAVTDYTAALELDPTYATALGARGQAHQQAGR 727
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A+ L L +D ++ A RG G++ +A+ DL++ L +DP+ L R
Sbjct: 728 HEQAVTDLTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAALELDPTYAAALGARG 787
Query: 627 SCYHAIGEYREAV 639
+ G Y EAV
Sbjct: 788 DTHRQAGRYDEAV 800
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 111/254 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG G+ A++ L+ DP AL RG + A++D+T A++ +
Sbjct: 615 SRGETHQQAGRNQEAVADLTAALELDPTLTWALGARGDTHRQAGRYDEAVTDYTAALELD 674
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A RG+ G EA+ D + ALE +P A L RG + + AV D
Sbjct: 675 PTLTWALGARGETHRQAGRYDEAVTDYTAALELDPTYATALGARGQAHQQAGRHEQAVTD 734
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+A ++LD +A G G Y +A A++LD + A G ++
Sbjct: 735 LTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAALELDPTYAAALGARGDTHRQAG 794
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ L +D ++ A RG G++ +A+ DL++ L +DP+ L R
Sbjct: 795 RYDEAVTDYTAALELDPTYATALGARGETHRQAGRYDEAVTDLTATLELDPTYAAALGSR 854
Query: 626 ASCYHAIGEYREAV 639
+ Y EAV
Sbjct: 855 GDAHKQASRYDEAV 868
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A G+Y A++ L+ DP A+ RG A + A++D T A++ +
Sbjct: 887 SRGDAHRQAGRYDEAVTDLTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELD 946
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A RG+ G +A+ D + ALE +P +A + RG + + ++ AV D
Sbjct: 947 PTLTWALGARGETHQQAGRYEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTD 1006
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+A ++LD A G G Y++A + A++LD A + ++
Sbjct: 1007 LTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTDDWALAQRGETHRQAG 1066
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ L +D + A RG G++++A+ DL++ L +DP+ L R
Sbjct: 1067 RYEQAITDYTAALELDPTDAWALGSRGQAHQQAGRYEQAVTDLTAALELDPTLDWALASR 1126
Query: 626 ASCYHAIGEYREA 638
+ + G EA
Sbjct: 1127 SQAHRQAGHREEA 1139
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A++ L+ +P AL RG + A++D T A++ +P+ A RG
Sbjct: 595 AVADLTAALELEPTNAWALGSRGETHQQAGRNQEAVADLTAALELDPTLTWALGARGDTH 654
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G EA+ D + ALE +P L RG + + ++ AV D +A ++LD +A
Sbjct: 655 RQAGRYDEAVTDYTAALELDPTLTWALGARGETHRQAGRYDEAVTDYTAALELDPTYATA 714
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
G A G +++A A++LD + A G ++ ++A+ L L
Sbjct: 715 LGARGQAHQQAGRHEQAVTDLTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAALE 774
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+D ++ A RG G++ +A+ D ++ L +DP+ L R + G Y EAV
Sbjct: 775 LDPTYAAALGARGDTHRQAGRYDEAVTDYTAALELDPTYATALGARGETHRQAGRYDEAV 834
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 9/243 (3%)
Query: 290 KASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDST---ESRS 346
+ +++ GR D L D + + +++ ++ D +D T E
Sbjct: 956 RGETHQQAGRYEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDP 1015
Query: 347 KLSFKWDMLKETSNEAKRNKKFCVTRISKSK-SISVDFRLS-RGIAQVNEGKYASAISIF 404
L++ ET +A R ++ + + + D+ L+ RG G+Y AI+ +
Sbjct: 1016 TLTWALGARGETHQQAGRYEQAVADYTAALELDPTDDWALAQRGETHRQAGRYEQAITDY 1075
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
L+ DP AL RG A E A++D T A++ +P+ A R QA G
Sbjct: 1076 TAALELDPTDAWALGSRGQAHQQAGRYEQAVTDLTAALELDPTLDWALASRSQAHRQAGH 1135
Query: 465 SVEAIQDLSKALEFEPNSADILHERGI---VNFKFKDFNAAVED-LSACVKLDKENKSAY 520
EA D+ +A E P+ + E+ + V +F+ F L++ V E K++Y
Sbjct: 1136 REEARMDVEQATEAHPDDLECAFEKLMLETVEGRFEAFREQWRQLLTSPVNPQDETKASY 1195
Query: 521 TYL 523
L
Sbjct: 1196 LRL 1198
>gi|409994049|ref|ZP_11277171.1| TPR repeat-containing serine/threonine protein kinase [Arthrospira
platensis str. Paraca]
gi|206585491|gb|ACI15551.1| serine/threonine protein kinase [Arthrospira platensis S6]
gi|409935123|gb|EKN76665.1| TPR repeat-containing serine/threonine protein kinase [Arthrospira
platensis str. Paraca]
Length = 732
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 136/275 (49%), Gaps = 13/275 (4%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ K + D +R +A G + +AI+ +Q+++ +P +A RG A Q
Sbjct: 401 TQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQEN 460
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
EAAI D+TE I+ P EA++ RG A G + D ++A+ P SA + RG
Sbjct: 461 YEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAAAYYNRG 520
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY-----TYLGLALSSIGEYKKAEEAHLKAIQ 545
F D+ A+ D + + + +N AY TY+ L G Y+ A E+ ++IQ
Sbjct: 521 RARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINL-----GNYEAAIESCSRSIQ 575
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKA 604
L+ ++ + + Y ++ N + A+ + + ++ SKA+ RG L+H L + ++ A
Sbjct: 576 LNPTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRG-LVHSLAEDYEAA 633
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I D S + ++P++ E RA + +G Y +A+
Sbjct: 634 IADYSQAISLNPNDAESYSNRAQAHAELGNYSQAI 668
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA +F + + DP+ EA + RG R + EAAI F +IQ P
Sbjct: 316 GIAATGLVGLMVIFGLFQVLNRPDPVKSEAALKRGVERLESGDPEAAIKAFNRSIQLFPD 375
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+++R A L + +AI D ++A++ +P + DI R + + DF A+ DL+
Sbjct: 376 NSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLN 435
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ E+ A+ GLA + Y+ A + + I+ + EA+ + N
Sbjct: 436 QVIRLNPEDTDAFYQRGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNL 495
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+ + + + ++ + + AY+ RG LG ++ A+ D + + +P N E R S
Sbjct: 496 QAGMADYTEAIRLNPQSAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCS 555
Query: 628 CYHAIGEYREAV 639
Y +G Y A+
Sbjct: 556 TYINLGNYEAAI 567
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 133/273 (48%), Gaps = 6/273 (2%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++ + + L RG+ ++ G +AI F++ ++ P EA R A ++ E
Sbjct: 335 LNRPDPVKSEAALKRGVERLESGDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYE 394
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+D+T+AI+ +P+ + + R A +G+ AI DL++ + P D ++RG+
Sbjct: 395 QAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLA 454
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++ +++ AA+ D + ++ ++ AY G A G + + +AI+L+
Sbjct: 455 HYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAA 514
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
A+ + + L + + AL QV+ + ++AY R LG ++ AI+ S +
Sbjct: 515 AYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSI 574
Query: 613 GIDPS----NIECL-YLRASCYH-AIGEYREAV 639
++P+ N C+ YL Y AIG+ +A+
Sbjct: 575 QLNPTAMDYNNRCIAYLNVQNYDAAIGDCTKAI 607
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA +N Y +AI + ++ +P +A RG + + EAAI+D+++AI N
Sbjct: 585 NRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLN 644
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E++ R QA A LG +AI D ++A+ PN A + RG+V D A+ D
Sbjct: 645 PNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISD 704
Query: 506 LSACVKL 512
KL
Sbjct: 705 FEQAGKL 711
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G Y A++ ++Q++ +P EA R + EAAI + +IQ N
Sbjct: 518 NRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLN 577
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+A + + R A + AI D +KA+E EPN++ RG+V+ +D+ AA+ D
Sbjct: 578 PTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIAD 636
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
S + L+ + +Y+ A + +G Y +A + +AI++ N A+
Sbjct: 637 YSQAISLNPNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAF 685
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI D T+AI+ P+ +A RG + + AI D S+A+ PN A+ R
Sbjct: 597 DAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLNPNDAESYSNRAQ 656
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ + +++ A+ D + +++ A+ G+ +S+G+ + A
Sbjct: 657 AHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGA 701
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+ + A +A ++IQL + EA+ Y DL E+A+ Q + +D Y
Sbjct: 357 GDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFN 416
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
R L H +G AI DL+ + ++P + + Y R ++ Y A++
Sbjct: 417 RSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQENYEAAIL 466
>gi|291569640|dbj|BAI91912.1| serine/threonine protein kinase containing TPR domain [Arthrospira
platensis NIES-39]
Length = 732
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 136/275 (49%), Gaps = 13/275 (4%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ K + D +R +A G + +AI+ +Q+++ +P +A RG A Q
Sbjct: 401 TQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQEN 460
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
EAAI D+TE I+ P EA++ RG A G + D ++A+ P SA + RG
Sbjct: 461 YEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAAAYYNRG 520
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY-----TYLGLALSSIGEYKKAEEAHLKAIQ 545
F D+ A+ D + + + +N AY TY+ L G Y+ A E+ ++IQ
Sbjct: 521 RARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINL-----GNYEAAIESCSRSIQ 575
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKA 604
L+ ++ + + Y ++ N + A+ + + ++ SKA+ RG L+H L + ++ A
Sbjct: 576 LNPTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRG-LVHSLAEDYEAA 633
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I D S + ++P++ E RA + +G Y +A+
Sbjct: 634 IADYSQAISLNPNDAESYSNRAQAHAELGNYSQAI 668
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA +F + + DP+ EA + RG R + EAAI F +IQ P
Sbjct: 316 GIAATGLVGLMVIFGLFQVLNRPDPVKSEAALKRGVERLEAGDPEAAIKAFNRSIQLFPD 375
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+++R A L + +AI D ++A++ +P + DI R + + DF A+ DL+
Sbjct: 376 NSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLN 435
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ E+ A+ GLA + Y+ A + + I+ + EA+ + N
Sbjct: 436 QVIRLNPEDTDAFYQRGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNL 495
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+ + + + ++ + + AY+ RG LG ++ A+ D + + +P N E R S
Sbjct: 496 QAGMADYTEAIRLNPQSAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCS 555
Query: 628 CYHAIGEYREAV 639
Y +G Y A+
Sbjct: 556 TYINLGNYEAAI 567
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 133/273 (48%), Gaps = 6/273 (2%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++ + + L RG+ ++ G +AI F++ ++ P EA R A ++ E
Sbjct: 335 LNRPDPVKSEAALKRGVERLEAGDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYE 394
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+D+T+AI+ +P+ + + R A +G+ AI DL++ + P D ++RG+
Sbjct: 395 QAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLA 454
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++ +++ AA+ D + ++ ++ AY G A G + + +AI+L+
Sbjct: 455 HYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAA 514
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
A+ + + L + + AL QV+ + ++AY R LG ++ AI+ S +
Sbjct: 515 AYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSI 574
Query: 613 GIDPS----NIECL-YLRASCYH-AIGEYREAV 639
++P+ N C+ YL Y AIG+ +A+
Sbjct: 575 QLNPTAMDYNNRCIAYLNVQNYDAAIGDCTKAI 607
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA +N Y +AI + ++ +P +A RG + + EAAI+D+++AI N
Sbjct: 585 NRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLN 644
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E++ R QA A LG +AI D ++A+ PN A + RG+V D A+ D
Sbjct: 645 PNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISD 704
Query: 506 LSACVKL 512
KL
Sbjct: 705 FEQAGKL 711
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G Y A++ ++Q++ +P EA R + EAAI + +IQ N
Sbjct: 518 NRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLN 577
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+A + + R A + AI D +KA+E EPN++ RG+V+ +D+ AA+ D
Sbjct: 578 PTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIAD 636
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
S + L+ + +Y+ A + +G Y +A + +AI++ N A+
Sbjct: 637 YSQAISLNPNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAF 685
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI D T+AI+ P+ +A RG + + AI D S+A+ PN A+ R
Sbjct: 597 DAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLNPNDAESYSNRAQ 656
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ + +++ A+ D + +++ A+ G+ +S+G+ + A
Sbjct: 657 AHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGA 701
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+ + A +A ++IQL + EA+ Y DL E+A+ Q + +D Y
Sbjct: 357 GDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFN 416
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
R L H +G AI DL+ + ++P + + Y R ++ Y A++
Sbjct: 417 RSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQENYEAAIL 466
>gi|354567939|ref|ZP_08987106.1| serine/threonine protein kinase [Fischerella sp. JSC-11]
gi|353541613|gb|EHC11080.1| serine/threonine protein kinase [Fischerella sp. JSC-11]
Length = 759
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 140/297 (47%), Gaps = 15/297 (5%)
Query: 358 TSNEAKRN--KKFCVTRISKSKSISVDFRLSRGIAQVNEG-------------KYASAIS 402
T+N+ K+N KK I +I + I VN +Y A+S
Sbjct: 333 TNNKRKKNITKKILAGTIILGLAIGASLYIINSINSVNATELYKKANTFYELQRYQDALS 392
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
F++ +K P Y EA G+G+ + +E +AA++ + AIQ P EAW RG L
Sbjct: 393 AFEKAVKIRPDYAEAWNGQGSTLSKLKEYKAALTAYDRAIQIQPDYLEAWIGRGFVLKNL 452
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
EAI KAL+ + NS + +G V K ++ A+ + L K++ +A+
Sbjct: 453 QRYQEAIASFDKALQLDTNSPQLWTTKGEVLSSLKRYDEAISAYEQAINLKKDDYTAWYN 512
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
L L ++ Y++A A+ KA+++ ++ EAW + +L + A + + I+
Sbjct: 513 KALTLQNLKRYEEAVRAYDKAVEIKPSYAEAWYNRGNALVNLQRYQDAFTAYDKAVQINP 572
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +A+ RG +L L ++ +A++ L+ + I+P N + Y + H + Y EA+
Sbjct: 573 TYYQAWLSRGNILISLQRYPEAVESLNQVIQINPQNYQAWYAKGWSQHQMQRYNEAL 629
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 119/244 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y +A++ +D+ ++ P Y EA IGRG + + AI+ F +A+Q + ++ + W +
Sbjct: 420 EYKAALTAYDRAIQIQPDYLEAWIGRGFVLKNLQRYQEAIASFDKALQLDTNSPQLWTTK 479
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ ++L EAI +A+ + + + + + K + AV V++
Sbjct: 480 GEVLSSLKRYDEAISAYEQAINLKKDDYTAWYNKALTLQNLKRYEEAVRAYDKAVEIKPS 539
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G AL ++ Y+ A A+ KA+Q++ + +AW L +A+E L
Sbjct: 540 YAEAWYNRGNALVNLQRYQDAFTAYDKAVQINPTYYQAWLSRGNILISLQRYPEAVESLN 599
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
QV+ I+ + +A++ +G H + ++ +A+ + ++ + Y R + + + +Y
Sbjct: 600 QVIQINPQNYQAWYAKGWSQHQMQRYNEALAAYDQAAELKRNDYQLWYNRGNSLYNLQKY 659
Query: 636 REAV 639
EA+
Sbjct: 660 EEAI 663
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 10/235 (4%)
Query: 396 KYASAISIFDQI--LKED---PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
+Y AIS ++Q LK+D Y +AL + R E A+ + +A++ PS E
Sbjct: 488 RYDEAISAYEQAINLKKDDYTAWYNKALTLQNLKR-----YEEAVRAYDKAVEIKPSYAE 542
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
AW RG A L +A KA++ P RG + + + AVE L+ +
Sbjct: 543 AWYNRGNALVNLQRYQDAFTAYDKAVQINPTYYQAWLSRGNILISLQRYPEAVESLNQVI 602
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+++ +N A+ G + + Y +A A+ +A +L RN + W + +L E+A
Sbjct: 603 QINPQNYQAWYAKGWSQHQMQRYNEALAAYDQAAELKRNDYQLWYNRGNSLYNLQKYEEA 662
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + + + + +++ RG L L ++++AI + + I P N + + R
Sbjct: 663 IASYDRAVRYNPQHYESWFSRGNALFNLLRYQEAIASYNQAIKIKPDNQQAIQAR 717
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 81/162 (50%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N +Y A+ +D+ ++ P Y EA RG A + + A + + +A+Q NP+ +AW
Sbjct: 519 NLKRYEEAVRAYDKAVEIKPSYAEAWYNRGNALVNLQRYQDAFTAYDKAVQINPTYYQAW 578
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG +L EA++ L++ ++ P + + +G + + +N A+ +L
Sbjct: 579 LSRGNILISLQRYPEAVESLNQVIQINPQNYQAWYAKGWSQHQMQRYNEALAAYDQAAEL 638
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + + G +L ++ +Y++A ++ +A++ + E+W
Sbjct: 639 KRNDYQLWYNRGNSLYNLQKYEEAIASYDRAVRYNPQHYESW 680
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 34/168 (20%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A VN +Y A + +D+ ++ +P Y +A + RG + A+ + IQ N
Sbjct: 546 NRGNALVNLQRYQDAFTAYDKAVQINPTYYQAWLSRGNILISLQRYPEAVESLNQVIQIN 605
Query: 446 PSAGEAWKRRG----------QARAALGESVE------------------------AIQD 471
P +AW +G +A AA ++ E AI
Sbjct: 606 PQNYQAWYAKGWSQHQMQRYNEALAAYDQAAELKRNDYQLWYNRGNSLYNLQKYEEAIAS 665
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+A+ + P + RG F + A+ + +K+ +N+ A
Sbjct: 666 YDRAVRYNPQHYESWFSRGNALFNLLRYQEAIASYNQAIKIKPDNQQA 713
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 19/203 (9%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILD-SLLAQS 66
++ Y L + + ++ V++ A A + + L L+ + A+ D ++ Q
Sbjct: 379 NTFYELQRYQDALSAFEKAVKIRPDYAEAWNG--QGSTLSKLKEYKAALTAYDRAIQIQP 436
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
++ R F L+ ++ I DKALQLD Q + KG S+L R +EA+S +
Sbjct: 437 DYLEAWIGRGFVLKNLQRYQEAIASFDKALQLDTNSPQLWTTKGEVLSSLKRYDEAISAY 496
Query: 127 EKG-------YEHALHQSADLKQFLELEELLTAAKQDRSVTCE-------YDVSNSMSSL 172
E+ Y +++ L+ EE + A D++V + Y+ N++ +L
Sbjct: 497 EQAINLKKDDYTAWYNKALTLQNLKRYEEAVRAY--DKAVEIKPSYAEAWYNRGNALVNL 554
Query: 173 TVSESGLNANDKMSETSENHNKS 195
+ A DK + + + ++
Sbjct: 555 QRYQDAFTAYDKAVQINPTYYQA 577
>gi|113477431|ref|YP_723492.1| hypothetical protein Tery_3996 [Trichodesmium erythraeum IMS101]
gi|110168479|gb|ABG53019.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 1694
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 128/595 (21%), Positives = 248/595 (41%), Gaps = 46/595 (7%)
Query: 82 LELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE--HALHQSAD 139
LE ++ + +KAL++ P +A+ LKG A L R EEA++ +EK E H++
Sbjct: 375 LERYEEAVAAYEKALEIKPDFHEAWFLKGIALGNLERYEEAVAAYEKALEIKPDFHEAWF 434
Query: 140 LK-----QFLELEELLTAAKQDRSVTCEYDVS-----NSMSSLTVSESGLNANDKMSETS 189
LK EE + A ++ + ++ + N++ +L E + A +K E
Sbjct: 435 LKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIK 494
Query: 190 ENHNKSDIC-----------DSSSQSRDVSETCSKSSHDPDLCNGRS--DEAKGGSSVPV 236
+ + + + + + + + HD G + + + +V
Sbjct: 495 PDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAA 554
Query: 237 SKSGLHINGKLREVSENHNGSSDGS-----KSTHASRDASEINRQSSDDFDICNGPIDKA 291
+ L I E G++ G+ ++ A A EI + + + +
Sbjct: 555 YEKALEIKPDFHEAW-FLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNL 613
Query: 292 SVNER----HGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSK 347
E + + D HD +L N E Y ++ + K+ E +
Sbjct: 614 ERYEEAVAAYEKALEIKPDFHDAWFLKGNALG----NLERYEEAVAAYEKA---LEIKPD 666
Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIF 404
+ W + +R ++ V K+ I DF + +GIA +Y A++ F
Sbjct: 667 FHYAWFLKGNALGNLERYEE-AVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAF 725
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
++ L+ P + EA +G A E A++ F +A++ P EAW +G A L
Sbjct: 726 EKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLER 785
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
EA+ KALE +P+ + + +GI K + + AV +++ + A+ G
Sbjct: 786 YEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHDAWFLKG 845
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
AL ++ Y++A A+ KA+++ +F EAW + ++L E+A+ ++ L I F
Sbjct: 846 NALGNLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDF 905
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+A++ +G+ L L ++++A+ L I P E + + + + Y EAV
Sbjct: 906 HEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAV 960
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 127/603 (21%), Positives = 249/603 (41%), Gaps = 46/603 (7%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE-- 131
N+ LE ++ + +KAL++ P +A+ LKG A L R EEA++ +EK E
Sbjct: 265 NKGSALINLERYEEAVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIK 324
Query: 132 HALHQSADLKQF----LE-LEELLTAAKQDRSVTCEYDVS-----NSMSSLTVSESGLNA 181
H++ LK LE EE + A ++ + ++ + N++ +L E + A
Sbjct: 325 PDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAA 384
Query: 182 NDKMSETSENHNKSDIC-----------DSSSQSRDVSETCSKSSHDPDLCNGRS--DEA 228
+K E + +++ + + + + + H+ G + +
Sbjct: 385 YEKALEIKPDFHEAWFLKGIALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLE 444
Query: 229 KGGSSVPVSKSGLHINGKLREVSENHNGSSDGS-----KSTHASRDASEINRQSSDDFDI 283
+ +V + L I E G++ G+ ++ A A EI D + +
Sbjct: 445 RYEEAVAAYEKALEIKPDFHEAW-FLKGNALGNLERYEEAVAAYEKALEIKPDFHDAWFL 503
Query: 284 CNGPIDKASVNER----HGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSS 339
+ E + + D HD +L N E Y ++ + K
Sbjct: 504 KGNALGNLERYEEAVAAYEKALEIKPDFHDAWFLKGNALG----NLERYEEAVAAYEK-- 557
Query: 340 DSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGK 396
+ E + W + +R ++ V K+ I DF +G A N +
Sbjct: 558 -ALEIKPDFHEAWFLKGNALGNLERYEE-AVAAYEKALEIKPDFHEAWFLKGNALGNLER 615
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A++ +++ L+ P + +A +G A E A++ + +A++ P AW +G
Sbjct: 616 YEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHYAWFLKG 675
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A L EA+ KALE +P+ + + +GI K + + AV +++ +
Sbjct: 676 NALGNLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDF 735
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A+ G+AL + Y++A A KA+++ +F EAW + + L E+A+ ++
Sbjct: 736 HEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEK 795
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L I F +A++ +G+ L L ++++A+ L I P + +L+ + + Y
Sbjct: 796 ALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYE 855
Query: 637 EAV 639
EAV
Sbjct: 856 EAV 858
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V K+ I DF + +GIA +Y A++ F++ L+ P + EA +G A
Sbjct: 755 AVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIAL 814
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A++ F +A++ P +AW +G A L EA+ KALE +P+ +
Sbjct: 815 EKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEA 874
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
H +GI + + AV +++ + A+ G+AL + Y++A A KA++
Sbjct: 875 WHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALE 934
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +F EAW + +L E+A+ ++ L I F A+ L+G+ L L ++++A+
Sbjct: 935 IKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIKPDFHYAWFLKGIALGKLERYEEAV 994
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P E +L+ + Y EAV
Sbjct: 995 AAYEKALEIKPDFHEAWFLKGIALGKLERYEEAV 1028
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 119/569 (20%), Positives = 228/569 (40%), Gaps = 48/569 (8%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
+ +LE ++ + +KAL++ P +A+ LKG A L R EEA++ YE AL
Sbjct: 980 KGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVA----AYEKAL 1035
Query: 135 HQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK 194
D + A ++ + E ++ ++ E L E HNK
Sbjct: 1036 EIKPDFHE----------AWHNKGIALE-NLERYEEAVAAYEKALEIKPDFHEAW--HNK 1082
Query: 195 SDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSEN 253
++ + + K+ PD ++ ++ + + K E+ +
Sbjct: 1083 GIALENLERYEEAVAAYEKALEIKPDYHYAWHNKGDALENLERYEEAVAAYEKALEIKPD 1142
Query: 254 HNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSS 313
++ + +G I + ++ +KA D HD
Sbjct: 1143 YHYAWNGKG----------IALIKLERYEEAVAAFEKA---------LEIKPDFHDAWFL 1183
Query: 314 DSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRI 373
+L N E Y ++ + K+ E + W+ K + E + V
Sbjct: 1184 KGNALG----NLERYEEAVAAFEKA---LEIKPDFHEAWNN-KGIALEKLERYEEAVAAF 1235
Query: 374 SKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
K+ I DF + +G A + +Y A++ +++ L+ P + +A +G A
Sbjct: 1236 EKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKALEIKPDFHDAWFLKGNALIKLER 1295
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E A++ + +A++ P EAW +G A L EA+ KALE +P+ + +G
Sbjct: 1296 YEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKG 1355
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K + + AV +++ + A+ G AL ++ Y++A A+ KA+++ +F
Sbjct: 1356 NALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDF 1415
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
EAW + L E+A+ ++ L I F +A+H +G L L ++++A+
Sbjct: 1416 HEAWHNKGIALGKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEK 1475
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P E +L+ + + Y EAV
Sbjct: 1476 ALEIKPDFHEAWFLKGNALIKLERYEEAV 1504
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V K+ I DF + +GIA N +Y A++ +++ L+ P + EA +G A
Sbjct: 857 AVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWNNKGIAL 916
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A++ F +A++ P EAW +G A L EA+ KALE +P+
Sbjct: 917 EKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIKPDFHYA 976
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+GI K + + AV +++ + A+ G+AL + Y++A A+ KA++
Sbjct: 977 WFLKGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKALE 1036
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +F EAW + ++L E+A+ ++ L I F +A+H +G+ L L ++++A+
Sbjct: 1037 IKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAV 1096
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P + + + Y EAV
Sbjct: 1097 AAYEKALEIKPDYHYAWHNKGDALENLERYEEAV 1130
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 128/604 (21%), Positives = 238/604 (39%), Gaps = 48/604 (7%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE-- 131
N+ +LE ++ + +KAL++ P +A+ KG A L R EEA++ +EK E
Sbjct: 741 NKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIK 800
Query: 132 HALHQSAD-----LKQFLELEELLTAAKQDRSVTCEYD-----VSNSMSSLTVSESGLNA 181
H++ + L++ EE + A ++ + ++ N++ +L E + A
Sbjct: 801 PDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAA 860
Query: 182 NDKMSETSEN-----HNKSDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEA------- 228
+K E + HNK ++ + + K+ PD +++
Sbjct: 861 YEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWNNKGIALEKLE 920
Query: 229 KGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPI 288
+ +V + L I E N + + + A E + DF
Sbjct: 921 RYEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIKPDFHYAWF-- 978
Query: 289 DKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKL 348
G + +++ +L E++ I+ K E+ +
Sbjct: 979 -------LKGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAY 1031
Query: 349 SFKWDMLKETSNEAKRNKKFC----------VTRISKSKSISVDFRLS---RGIAQVNEG 395
K +K +EA NK V K+ I DF + +GIA N
Sbjct: 1032 E-KALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLE 1090
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A++ +++ L+ P Y A +G A E A++ + +A++ P AW +
Sbjct: 1091 RYEEAVAAYEKALEIKPDYHYAWHNKGDALENLERYEEAVAAYEKALEIKPDYHYAWNGK 1150
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L EA+ KALE +P+ D +G + + AV +++ +
Sbjct: 1151 GIALIKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAFEKALEIKPD 1210
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+AL + Y++A A KA+++ +F EAW + L E+A+ +
Sbjct: 1211 FHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYE 1270
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ L I F A+ L+G L L ++++A+ L I P E +L+ + + Y
Sbjct: 1271 KALEIKPDFHDAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERY 1330
Query: 636 REAV 639
EAV
Sbjct: 1331 EEAV 1334
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 120/583 (20%), Positives = 230/583 (39%), Gaps = 40/583 (6%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
N+ +LE ++ + +KAL++ P +A+ KG A L R EEA++ +EK
Sbjct: 707 NKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKA---- 762
Query: 134 LHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHN 193
LE++ A ++ + E + ++ E L E N
Sbjct: 763 ----------LEIKPDFHEAWNNKGIALE-KLERYEEAVAAFEKALEIKPDFHEAWNNKG 811
Query: 194 ----KSDICDSSSQSRDVSETCSKSSHDPDLCNGRS--DEAKGGSSVPVSKSGLHINGKL 247
K + + + + + + HD G + + + +V + L I
Sbjct: 812 IALEKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDF 871
Query: 248 REVSENHNGSSDGSKSTHASRDASEINRQSSDDF-DICNGPIDKASVNERHGRQTNGTH- 305
E N + + + + A E + DF + N ER+
Sbjct: 872 HEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEK 931
Query: 306 ------DVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETS 359
D H+ + +L N E Y ++ + K+ E + + W +
Sbjct: 932 ALEIKPDFHEAWHNKGNALG----NLERYEEAVAAYEKA---LEIKPDFHYAWFLKGIAL 984
Query: 360 NEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
+ +R ++ V K+ I DF +GIA +Y A++ +++ L+ P + E
Sbjct: 985 GKLERYEE-AVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKALEIKPDFHE 1043
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A +G A E A++ + +A++ P EAW +G A L EA+ KAL
Sbjct: 1044 AWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKAL 1103
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E +P+ H +G + + AV +++ + A+ G+AL + Y++A
Sbjct: 1104 EIKPDYHYAWHNKGDALENLERYEEAVAAYEKALEIKPDYHYAWNGKGIALIKLERYEEA 1163
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
A KA+++ +F +AW +L E+A+ ++ L I F +A++ +G+ L
Sbjct: 1164 VAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAFEKALEIKPDFHEAWNNKGIALE 1223
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L ++++A+ L I P E + + + + Y EAV
Sbjct: 1224 KLERYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAV 1266
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 126/581 (21%), Positives = 232/581 (39%), Gaps = 64/581 (11%)
Query: 82 LELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE--HALHQSAD 139
LE ++ + +KAL++ P +A+ LKG A L R EEA++ +EK E H +
Sbjct: 579 LERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHDAWF 638
Query: 140 LK-----QFLELEELLTAAKQDRSVTCEYDVS-----NSMSSLTVSESGLNANDKMSETS 189
LK EE + A ++ + ++ + N++ +L E + A +K E
Sbjct: 639 LKGNALGNLERYEEAVAAYEKALEIKPDFHYAWFLKGNALGNLERYEEAVAAFEKALEIK 698
Query: 190 EN-----HNKSDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEA-------KGGSSVPV 236
+ +NK + + + K+ PD +++ + +V
Sbjct: 699 PDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAA 758
Query: 237 SKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDF-DICNGPIDKASVNE 295
+ L I E N + + + + A E + DF + N E
Sbjct: 759 FEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLE 818
Query: 296 RHGRQTNGTH-------DVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKL 348
R+ D HD +L N E Y ++ + K+ +
Sbjct: 819 RYEEAVAAFEKALEIKPDFHDAWFLKGNALG----NLERYEEAVAAYEKALE-------- 866
Query: 349 SFKWDMLKETSNEAKRNKKFC----------VTRISKSKSISVDFRLS---RGIAQVNEG 395
+K +EA NK V K+ I DF + +GIA
Sbjct: 867 ------IKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWNNKGIALEKLE 920
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A++ F++ L+ P + EA +G A E A++ + +A++ P AW +
Sbjct: 921 RYEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIKPDFHYAWFLK 980
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L EA+ KALE +P+ + +GI K + + AV +++ +
Sbjct: 981 GIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKALEIKPD 1040
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+AL ++ Y++A A+ KA+++ +F EAW + ++L E+A+ +
Sbjct: 1041 FHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYE 1100
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ L I + A+H +G L L ++++A+ L I P
Sbjct: 1101 KALEIKPDYHYAWHNKGDALENLERYEEAVAAYEKALEIKP 1141
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 128/595 (21%), Positives = 240/595 (40%), Gaps = 46/595 (7%)
Query: 82 LELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE--HALHQSAD 139
LE ++ + +KAL++ P +A+ KG A L R EEA++ +EK E H++ +
Sbjct: 851 LERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWN 910
Query: 140 -----LKQFLELEELLTAAKQDRSVTCEY-----DVSNSMSSLTVSESGLNANDKMSETS 189
L++ EE + A ++ + ++ + N++ +L E + A +K E
Sbjct: 911 NKGIALEKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIK 970
Query: 190 ENHN-----------KSDICDSSSQSRDVSETCSKSSHDPDLCNG-------RSDEAKGG 231
+ + K + + + + + + H+ G R +EA
Sbjct: 971 PDFHYAWFLKGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEA--- 1027
Query: 232 SSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKA 291
V + L I E N + + + + A E + DF A
Sbjct: 1028 --VAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWHNKGIA 1085
Query: 292 SVNERHGRQTNGTHDVHDKLSSDSA----SLNDSNTNSESYSKSSISDNKSSDSTESRSK 347
N + ++ ++ D + D+ N E Y ++ + K+ E +
Sbjct: 1086 LENLERYEEAVAAYEKALEIKPDYHYAWHNKGDALENLERYEEAVAAYEKA---LEIKPD 1142
Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIF 404
+ W+ + +R ++ V K+ I DF +G A N +Y A++ F
Sbjct: 1143 YHYAWNGKGIALIKLERYEE-AVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAF 1201
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
++ L+ P + EA +G A E A++ F +A++ P EAW +G A L
Sbjct: 1202 EKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLER 1261
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
EA+ KALE +P+ D +G K + + AV +++ + A+ G
Sbjct: 1262 YEEAVAAYEKALEIKPDFHDAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKG 1321
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
AL + Y++A A+ KA+++ +F EAW L E+A+ ++ L I F
Sbjct: 1322 NALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDF 1381
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+A+ L+G L L ++++A+ L I P E + + + Y EAV
Sbjct: 1382 HEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWHNKGIALGKLERYEEAV 1436
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 118/577 (20%), Positives = 230/577 (39%), Gaps = 44/577 (7%)
Query: 82 LELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLK 141
LE ++ + +KAL++ P A+ LKG A L R EEA++ +E AL D
Sbjct: 647 LERYEEAVAAYEKALEIKPDFHYAWFLKGNALGNLERYEEAVA----AFEKALEIKPDFH 702
Query: 142 QFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSS 201
+ A ++ + E + ++ E L E +NK +
Sbjct: 703 E----------AWNNKGIALE-KLERYEEAVAAFEKALEIKPDFHEAW--NNKGIALEKL 749
Query: 202 SQSRDVSETCSKSSH-DPDLCNGRSDEA-------KGGSSVPVSKSGLHINGKLREVSEN 253
+ + K+ PD +++ + +V + L I E N
Sbjct: 750 ERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNN 809
Query: 254 HNGSSDG----SKSTHASRDASEINRQSSDDFDICNGPIDKASVNER----HGRQTNGTH 305
+ + ++ A A EI D + + + E + +
Sbjct: 810 KGIALEKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKP 869
Query: 306 DVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRN 365
D H+ + +L N E Y ++ + K+ E + W+ K + E
Sbjct: 870 DFHEAWHNKGIALE----NLERYEEAVAAYEKA---LEIKPDFHEAWNN-KGIALEKLER 921
Query: 366 KKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
+ V K+ I DF + +G A N +Y A++ +++ L+ P + A +G
Sbjct: 922 YEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIKPDFHYAWFLKG 981
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
A E A++ + +A++ P EAW +G A L EA+ KALE +P+
Sbjct: 982 IALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKALEIKPDF 1041
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
+ H +GI + + AV +++ + A+ G+AL ++ Y++A A+ K
Sbjct: 1042 HEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEK 1101
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
A+++ ++ AW + ++L E+A+ ++ L I + A++ +G+ L L +++
Sbjct: 1102 ALEIKPDYHYAWHNKGDALENLERYEEAVAAYEKALEIKPDYHYAWNGKGIALIKLERYE 1161
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+A+ L I P + +L+ + + Y EAV
Sbjct: 1162 EAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAV 1198
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 14/248 (5%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
AI D+ LK +P A +G+A E A++ + +A++ P EAW +G A
Sbjct: 244 EAILTCDEALKIEPNDYNAWNNKGSALINLERYEEAVAAYEKALEIKPDFHEAWFLKGIA 303
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
L EA+ KALE +P+ + +GI + + AV +++ +
Sbjct: 304 LINLERYEEAVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPDFHE 363
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKAL 571
A+ G AL ++ Y++A A+ KA+++ +F EAW G+L ++ + +A EKAL
Sbjct: 364 AWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGNLERYEEAVAAYEKAL 423
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
E I F +A+ L+G L L ++++A+ L I P E +L+ +
Sbjct: 424 E-------IKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGN 476
Query: 632 IGEYREAV 639
+ Y EAV
Sbjct: 477 LERYEEAV 484
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI EA++ P+ AW +G A L EA+ KALE +P+ + +GI
Sbjct: 243 EEAILTCDEALKIEPNDYNAWNNKGSALINLERYEEAVAAYEKALEIKPDFHEAWFLKGI 302
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + AV +++ + A+ G+AL ++ Y++A A+ KA+++ +F
Sbjct: 303 ALINLERYEEAVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPDFH 362
Query: 552 EAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
EAW G+L ++ + +A EKALE I F +A+ L+G+ L L ++++A
Sbjct: 363 EAWFLKGNALGNLERYEEAVAAYEKALE-------IKPDFHEAWFLKGIALGNLERYEEA 415
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ L I P E +L+ + + Y EAV
Sbjct: 416 VAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAV 450
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 10/215 (4%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V K+ I DF +G A N +Y A++ +++ L+ P + EA +G A
Sbjct: 1367 AVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWHNKGIAL 1426
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A++ F +A++ P EAW +G A L EA+ KALE +P+ +
Sbjct: 1427 GKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKALEIKPDFHEA 1486
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+G K + + AV +++ + A+ G AL + Y++A A+ KA++
Sbjct: 1487 WFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALE 1546
Query: 546 LDRNFLEAWG-------HLTQFYQDLANSEKALEC 573
+ +F EAW L ++ + +A EKALE
Sbjct: 1547 IKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEI 1581
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V K+ I DF +G A + +Y A++ +++ L+ P + EA +G A
Sbjct: 1469 AVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNAL 1528
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A++ + +A++ P EAW +G A L EA+ KALE +P+
Sbjct: 1529 IKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDDEYS 1588
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ G+V ++ + A+E+ A +++ + +G+AL G
Sbjct: 1589 IINLGLVKYEMGFIDQAIENWQAATEINNQLVEPKLAIGVALYKKG 1634
>gi|386876076|ref|ZP_10118214.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
gi|386806122|gb|EIJ65603.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
Length = 297
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 124/253 (49%), Gaps = 23/253 (9%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A VN+GKY A+ ++D+ L DP +G A + A+ F +AIQ NP
Sbjct: 10 KGVALVNQGKYHKALKVYDKALNIDPNNWNVWYNKGVALDELGRNDEALECFNQAIQINP 69
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV--NFKFKD-----F 499
+ AW +G LG + EA+ + ++ +PN A + RG+ N D F
Sbjct: 70 NDAWAWSNKGITLGKLGRNDEAVMAFDQEIKIDPNDA-AWYNRGMALDNLGRNDEALECF 128
Query: 500 NAAVE----DLSACVK----LDKENKSA-------YTYLGLALSSIGEYKKAEEAHLKAI 544
N A++ +LSACVK LDK K+ +T G+AL I + +A E + +A+
Sbjct: 129 NQAIQINPNNLSACVKKDITLDKIGKNVEREMVRMWTNKGVALEKIDKLNEALECYDEAL 188
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++ RN++ W + L +ALEC Q + I+ + ++ +G+ L L ++ +A
Sbjct: 189 KISRNYMWPWDNKGIILNKLNRINEALECFNQAIQINPNDATVWNDKGVALGKLNRNDEA 248
Query: 605 IKDLSSGLGIDPS 617
+ + +DP+
Sbjct: 249 VMAFDQAIKLDPN 261
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G+AL + G+Y KA + + KA+ +D N W + +L +++ALEC
Sbjct: 2 ENATELCEKGVALVNQGKYHKALKVYDKALNIDPNNWNVWYNKGVALDELGRNDEALECF 61
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q + I+ + A+ +G+ L LG++ +A+ + IDP N Y R +G
Sbjct: 62 NQAIQINPNDAWAWSNKGITLGKLGRNDEAVMAFDQEIKIDP-NDAAWYNRGMALDNLGR 120
Query: 635 YREAV 639
EA+
Sbjct: 121 NDEAL 125
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L E+G+ ++ A++ + +D N + + G+AL +G +A E +AIQ
Sbjct: 7 LCEKGVALVNQGKYHKALKVYDKALNIDPNNWNVWYNKGVALDELGRNDEALECFNQAIQ 66
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ N AW + L +++A+ Q + ID A++ RG+ L LG++ +A+
Sbjct: 67 INPNDAWAWSNKGITLGKLGRNDEAVMAFDQEIKIDPN-DAAWYNRGMALDNLGRNDEAL 125
Query: 606 KDLSSGLGIDPSNI 619
+ + + I+P+N+
Sbjct: 126 ECFNQAIQINPNNL 139
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 23/207 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI G+ A+ FDQ +K DP A RG A + A+ F +AIQ N
Sbjct: 77 NKGITLGKLGRNDEAVMAFDQEIKIDP-NDAAWYNRGMALDNLGRNDEALECFNQAIQIN 135
Query: 446 PSAGEA----------------------WKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
P+ A W +G A + + EA++ +AL+ N
Sbjct: 136 PNNLSACVKKDITLDKIGKNVEREMVRMWTNKGVALEKIDKLNEALECYDEALKISRNYM 195
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+GI+ K N A+E + ++++ + + + G+AL + +A A +A
Sbjct: 196 WPWDNKGIILNKLNRINEALECFNQAIQINPNDATVWNDKGVALGKLNRNDEAVMAFDQA 255
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKA 570
I+LD N AW + ++L S++A
Sbjct: 256 IKLDPNSAVAWKNKGIALENLDKSDEA 282
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 26/185 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEAL---------IGRGTARAFQR------- 429
+RG+A N G+ A+ F+Q ++ +P A IG+ R R
Sbjct: 110 NRGMALDNLGRNDEALECFNQAIQINPNNLSACVKKDITLDKIGKNVEREMVRMWTNKGV 169
Query: 430 ------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
+L A+ + EA++ + + W +G L EA++ ++A++ PN A
Sbjct: 170 ALEKIDKLNEALECYDEALKISRNYMWPWDNKGIILNKLNRINEALECFNQAIQINPNDA 229
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ +++G+ K + AV +KLD + A+ G+AL ++ K++EAH A
Sbjct: 230 TVWNDKGVALGKLNRNDEAVMAFDQAIKLDPNSAVAWKNKGIALENL---DKSDEAH-NA 285
Query: 544 IQLDR 548
+++R
Sbjct: 286 FEMER 290
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V ++G+A K A+ +D+ LK Y +G + A+ F +
Sbjct: 161 VRMWTNKGVALEKIDKLNEALECYDEALKISRNYMWPWDNKGIILNKLNRINEALECFNQ 220
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
AIQ NP+ W +G A L + EA+ +A++ +PNSA +GI
Sbjct: 221 AIQINPNDATVWNDKGVALGKLNRNDEAVMAFDQAIKLDPNSAVAWKNKGI 271
>gi|427710488|ref|YP_007052865.1| hypothetical protein Nos7107_5206 [Nostoc sp. PCC 7107]
gi|427362993|gb|AFY45715.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 609
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 133/279 (47%), Gaps = 34/279 (12%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI+ +++ L+ +P + +A RG R++ ++ AAI+DF +A+Q NP +A+
Sbjct: 230 GDYPGAIADYNRALQINPHFAQAYYNRGLVRSYLKDYPAAIADFNQALQLNPDDVQAYYE 289
Query: 455 RGQARAALGESVEAIQDLSKAL----------------------------------EFEP 480
RG RA LG+ AI D +AL + P
Sbjct: 290 RGLVRATLGDFPGAITDYEQALAKNPTLALVYGFLAHARCQLGDYQGTIADSNHILQIHP 349
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A+ +R D+ A+ D + ++L +AY GLA ++ +Y A E +
Sbjct: 350 EYAEGYCDRATARRCLGDYQGAILDYNRALQLHPNLATAYYGRGLAREALQDYLAAVEEY 409
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI++D +F A+ + + L ++AL Q + I+ +AY+ RG L + L
Sbjct: 410 AQAIKIDPDFSPAYCNRGNALRLLGAEQRALADYNQAIKINPSLVEAYYNRGSLHYALQD 469
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI D ++ L I+P++ RAS Y+A+ +Y++A+
Sbjct: 470 YHGAIADYTTALQINPNSAAFYSDRASAYYALQDYQKAI 508
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 5/272 (1%)
Query: 373 ISKSKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
I+ +DF ++R G+A+ G Y A++ F Q L+ P Y RG
Sbjct: 135 INPELVTHIDFDIARAFHYRGVARSENGDYQGALADFQQALQWYPQYAAVYSSRGNIFHI 194
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E E AI+D A+Q +P EA+ RG ALG+ AI D ++AL+ P+ A +
Sbjct: 195 LEEYEQAIADHERALQLDPHLVEAYHYRGNTCYALGDYPGAIADYNRALQINPHFAQAYY 254
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+V KD+ AA+ D + ++L+ ++ AY GL +++G++ A + +A+ +
Sbjct: 255 NRGLVRSYLKDYPAAIADFNQALQLNPDDVQAYYERGLVRATLGDFPGAITDYEQALAKN 314
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+G L L + + + +L I +++ Y R LG ++ AI D
Sbjct: 315 PTLALVYGFLAHARCQLGDYQGTIADSNHILQIHPEYAEGYCDRATARRCLGDYQGAILD 374
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ L + P+ Y R A+ +Y AV
Sbjct: 375 YNRALQLHPNLATAYYGRGLAREALQDYLAAV 406
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 122/278 (43%), Gaps = 34/278 (12%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ ++ L+ DP EA RG + AI+D+ A+Q NP +A+ R
Sbjct: 197 EYEQAIADHERALQLDPHLVEAYHYRGNTCYALGDYPGAIADYNRALQINPHFAQAYYNR 256
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G R+ L + AI D ++AL+ P+ +ERG+V DF A+ D + +
Sbjct: 257 GLVRSYLKDYPAAIADFNQALQLNPDDVQAYYERGLVRATLGDFPGAITDYEQALAKNPT 316
Query: 516 NKSAYTYLGLALSSIGEYKK--AEEAHL-------------------------------- 541
Y +L A +G+Y+ A+ H+
Sbjct: 317 LALVYGFLAHARCQLGDYQGTIADSNHILQIHPEYAEGYCDRATARRCLGDYQGAILDYN 376
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+A+QL N A+ + L + A+E Q + ID FS AY RG L LG
Sbjct: 377 RALQLHPNLATAYYGRGLAREALQDYLAAVEEYAQAIKIDPDFSPAYCNRGNALRLLGAE 436
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++A+ D + + I+PS +E Y R S ++A+ +Y A+
Sbjct: 437 QRALADYNQAIKINPSLVEAYYNRGSLHYALQDYHGAI 474
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 9/270 (3%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISD 437
++ D ++G + +G + AI+ + + ++ P + EA RG + R+ AAI+D
Sbjct: 1 MNADDFFNQGFNKNLQGDFQGAIADYTEAIQLKPNFAEAYYNRGNIFYSSLRDYRAAIAD 60
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F +AIQ P+ EA+ RG +L + EAI + AL P A+ H RG V
Sbjct: 61 FHKAIQLKPNFAEAYHNRGNTLYSLADYEEAIANYEWALAINPKLAESHHGRGNVYCALG 120
Query: 498 DFNAAVEDLSACVKLDKENKS--------AYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+++ A+ D ++++ E + A+ Y G+A S G+Y+ A +A+Q
Sbjct: 121 EYDRAIADYHQAIEINPELVTHIDFDIARAFHYRGVARSENGDYQGALADFQQALQWYPQ 180
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + + L E+A+ ++ L +D +AYH RG + LG + AI D +
Sbjct: 181 YAAVYSSRGNIFHILEEYEQAIADHERALQLDPHLVEAYHYRGNTCYALGDYPGAIADYN 240
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I+P + Y R + +Y A+
Sbjct: 241 RALQINPHFAQAYYNRGLVRSYLKDYPAAI 270
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 115/228 (50%), Gaps = 2/228 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI +++ L+ P A GRG AR ++ AA+ ++ +AI+ +P A+
Sbjct: 366 GDYQGAILDYNRALQLHPNLATAYYGRGLAREALQDYLAAVEEYAQAIKIDPDFSPAYCN 425
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG A+ D ++A++ P+ + + RG +++ +D++ A+ D + ++++
Sbjct: 426 RGNALRLLGAEQRALADYNQAIKINPSLVEAYYNRGSLHYALQDYHGAIADYTTALQINP 485
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + Y+ A ++ +Y+KA + +AI LD +F E W H + L + + AL L
Sbjct: 486 NSAAFYSDRASAYYALQDYQKAIADYNQAIVLDPSFAEDWYHRGRSRLLLGDLQGALADL 545
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL--SSGLGIDPSNIE 620
Q L ++ AY LR + L + AI D S+ + NIE
Sbjct: 546 NQALQRQPHWASAYMLRADVYRQLEDFQGAIADFQQSANIYYQEGNIE 593
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 115/239 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + G + AI+ ++Q L ++P AR + + I+D +Q +P
Sbjct: 290 RGLVRATLGDFPGAITDYEQALAKNPTLALVYGFLAHARCQLGDYQGTIADSNHILQIHP 349
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E + R AR LG+ AI D ++AL+ PN A + RG+ +D+ AAVE+
Sbjct: 350 EYAEGYCDRATARRCLGDYQGAILDYNRALQLHPNLATAYYGRGLAREALQDYLAAVEEY 409
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K+D + AY G AL +G ++A + +AI+++ + +EA+ + + L +
Sbjct: 410 AQAIKIDPDFSPAYCNRGNALRLLGAEQRALADYNQAIKINPSLVEAYYNRGSLHYALQD 469
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
A+ L I+ + Y R + L ++KAI D + + +DPS E Y R
Sbjct: 470 YHGAIADYTTALQINPNSAAFYSDRASAYYALQDYQKAIADYNQAIVLDPSFAEDWYHR 528
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 11/265 (4%)
Query: 364 RNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
R+ + + K+ + +F +RG + Y AI+ ++ L +P E+ G
Sbjct: 52 RDYRAAIADFHKAIQLKPNFAEAYHNRGNTLYSLADYEEAIANYEWALAINPKLAESHHG 111
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPS--------AGEAWKRRGQARAALGESVEAIQDL 472
RG E + AI+D+ +AI+ NP A+ RG AR+ G+ A+ D
Sbjct: 112 RGNVYCALGEYDRAIADYHQAIEINPELVTHIDFDIARAFHYRGVARSENGDYQGALADF 171
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+AL++ P A + RG + +++ A+ D ++LD AY Y G ++G+
Sbjct: 172 QQALQWYPQYAAVYSSRGNIFHILEEYEQAIADHERALQLDPHLVEAYHYRGNTCYALGD 231
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y A + +A+Q++ +F +A+ + L + A+ Q L ++ +AY+ RG
Sbjct: 232 YPGAIADYNRALQINPHFAQAYYNRGLVRSYLKDYPAAIADFNQALQLNPDDVQAYYERG 291
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPS 617
L+ LG AI D L +P+
Sbjct: 292 LVRATLGDFPGAITDYEQALAKNPT 316
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYP 415
+ EA ++ V +++ I DF + RG A G A++ ++Q +K +P
Sbjct: 395 AREALQDYLAAVEEYAQAIKIDPDFSPAYCNRGNALRLLGAEQRALADYNQAIKINPSLV 454
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA RG+ ++ AI+D+T A+Q NP++ + R A AL + +AI D ++A
Sbjct: 455 EAYYNRGSLHYALQDYHGAIADYTTALQINPNSAAFYSDRASAYYALQDYQKAIADYNQA 514
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
+ +P+ A+ + RG D A+ DL+ ++ SAY
Sbjct: 515 IVLDPSFAEDWYHRGRSRLLLGDLQGALADLNQALQRQPHWASAYM 560
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V+ +RG Y AI+ + L+ +P R +A ++ + AI+D+ +
Sbjct: 454 VEAYYNRGSLHYALQDYHGAIADYTTALQINPNSAAFYSDRASAYYALQDYQKAIADYNQ 513
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI +PS E W RG++R LG+ A+ DL++AL+ +P+ A R V + +DF
Sbjct: 514 AIVLDPSFAEDWYHRGRSRLLLGDLQGALADLNQALQRQPHWASAYMLRADVYRQLEDFQ 573
Query: 501 AAVEDL--SACVKLDKENKSAYTYLGLALSSI 530
A+ D SA + + N Y + A++ +
Sbjct: 574 GAIADFQQSANIYYQEGNIEYYQQMLTAIAQL 605
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S F R A Y AI+ ++Q + DP + E RG +R +L+ A++D
Sbjct: 487 SAAFYSDRASAYYALQDYQKAIADYNQAIVLDPSFAEDWYHRGRSRLLLGDLQGALADLN 546
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+A+Q P A+ R L + AI D + SA+I ++ G + +
Sbjct: 547 QALQRQPHWASAYMLRADVYRQLEDFQGAIADFQQ-------SANIYYQEGNIEY 594
>gi|445064286|ref|ZP_21376363.1| hypothetical protein H263_12694 [Brachyspira hampsonii 30599]
gi|444504339|gb|ELV05024.1| hypothetical protein H263_12694 [Brachyspira hampsonii 30599]
Length = 352
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 126/233 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GI + G+Y AI +D+ +K +P +A +G A+ L+ AI ++ +AI+
Sbjct: 103 SKGIYKSANGQYLEAIKYYDEAIKLNPNMADAYYNKGIAKTKLGFLKEAIEEYNKAIELR 162
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ RG ++ LG EAI+D KAL +PN D H +G++ + F A++D
Sbjct: 163 ADYTDAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYHNKGVLENELGLFKEAIKD 222
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K+ ++ Y G + ++ Y+++ + + KAI+L+ N+ A+ + +L
Sbjct: 223 FNKAIKIADDDAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPNYAFAYNNRGNAKDNLG 282
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
E+A++ + + ++ ++ AY+ RG LG +++A+KD L +DP+N
Sbjct: 283 LYEEAIKDFDKAIKLNPDYADAYNNRGYSKENLGLYEEALKDYKKALKLDPNN 335
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 13/152 (8%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILK--EDPMYPEALI--GRGTARAF 427
K++S+D L ++G+ + G + AI F++ +K +D +A+I RG ++
Sbjct: 191 KALSIDPNLFDAYHNKGVLENELGLFKEAIKDFNKAIKIADD----DAVIYNNRGNSKYN 246
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E +I D+ +AI+ NP+ A+ RG A+ LG EAI+D KA++ P+ AD +
Sbjct: 247 LELYEESIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIKDFDKAIKLNPDYADAYN 306
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
RG + A++D +KLD N+ A
Sbjct: 307 NRGYSKENLGLYEEALKDYKKALKLDPNNEYA 338
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 424 ARAFQRELEAAISD-------FTEAIQSNPSAG----------EAWKRRGQARAALGESV 466
A+ F EL ISD FT + + + +G ++A G+ +
Sbjct: 56 AKTFNEELNKIISDKIYLIGSFTNIVDNKKKVDIDSLNILTDYHDYNSKGIYKSANGQYL 115
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ +A++ PN AD + +GI K A+E+ + ++L + AY GL
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKGIAKTKLGFLKEAIEEYNKAIELRADYTDAYYNRGLL 175
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
S +G ++A + KA+ +D N +A+ + +L ++A++ + + I +
Sbjct: 176 KSDLGLLEEAIKDFDKALSIDPNLFDAYHNKGVLENELGLFKEAIKDFNKAIKIADDDAV 235
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y+ RG + L ++++IKD + ++P+ R + +G Y EA+
Sbjct: 236 IYNNRGNSKYNLELYEESIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAI 288
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 19 TICEIDELVRVDSVMASAITAR-IELAKLCSLRN----WSKAIRILDSLLAQSYEIQDIC 73
I DE ++++ MA A + I KL L+ ++KAI + Y
Sbjct: 117 AIKYYDEAIKLNPNMADAYYNKGIAKTKLGFLKEAIEEYNKAIELRADYTDAYY------ 170
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L L + I+D DKAL +DP L AY KG + LG +EA+ + K
Sbjct: 171 NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYHNKGVLENELGLFKEAIKDFNKA 226
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI+I D + NR LEL++ I+D DKA++L+P AY
Sbjct: 219 AIKDFNKAIKIADD------DAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPNYAFAYN 272
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ ++K
Sbjct: 273 NRGNAKDNLGLYEEAIKDFDKA 294
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
S++++ KAI+ L+ A +Y NR L L++ I+D DKA++L+P AY
Sbjct: 253 SIKDYDKAIK-LNPNYAFAYN-----NRGNAKDNLGLYEEAIKDFDKAIKLNPDYADAYN 306
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G + LG EEAL ++K
Sbjct: 307 NRGYSKENLGLYEEALKDYKKA 328
>gi|171913931|ref|ZP_02929401.1| TPR repeat [Verrucomicrobium spinosum DSM 4136]
Length = 468
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 130/283 (45%), Gaps = 6/283 (2%)
Query: 363 KRNKKFCVTRISKSKSISVDFRL------SRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
K N +T + + + +D R +R +A V + + AI+ D LK +P
Sbjct: 38 KGNPDLAITHYTSALAKGLDSRFEAIVLQNRALAWVEKLSWQKAIADADAALKINPSSAT 97
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A R AR RE++ AI D++EAI+ P RG + A+QD AL
Sbjct: 98 AFAVRAEARKGLREIDRAILDYSEAIKLEPGDPIYLNNRGNLFDGQQKWDLALQDFDNAL 157
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ +P A L RG + A+ED +A ++LD +N AY GL +S+G+ ++A
Sbjct: 158 KIQPRYAHALAGRGEARRNLGQYEKALEDFNASIELDPKNPGAYNNRGLTQASLGKREEA 217
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ KAI L NF A+ + Y L ++ A Q L ID ++ A + R +L
Sbjct: 218 QADFNKAIDLLPNFAPAYNNRGFNYASLGRTKDAQTDYNQALKIDPAYTPALNNRAMLRV 277
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G K AI D S + + P N+ RA+ Y G+ +A+
Sbjct: 278 AEGSLKDAIADFSEIIRLRPDNVHAYNNRAAAYDKAGQPEKAL 320
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
K+ A+ FD LK P Y AL GRG AR + E A+ DF +I+ +P A+ R
Sbjct: 145 KWDLALQDFDNALKIQPRYAHALAGRGEARRNLGQYEKALEDFNASIELDPKNPGAYNNR 204
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G +A+LG+ EA D +KA++ PN A + RG A D + +K+D
Sbjct: 205 GLTQASLGKREEAQADFNKAIDLLPNFAPAYNNRGFNYASLGRTKDAQTDYNQALKIDPA 264
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A + + G K A + I+L + + A+ + Y EKAL L
Sbjct: 265 YTPALNNRAMLRVAEGSLKDAIADFSEIIRLRPDNVHAYNNRAAAYDKAGQPEKALADLD 324
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ + + + + + G+ +A+K+ ++ + P ++E
Sbjct: 325 TAIKLAPQDGQTHKNLAIAYVNRGRWDEALKEFTTASSLLPEDVET 370
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 5/166 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G+ A + ++Q LK DP Y AL R R + L+ AI+DF+E I+
Sbjct: 237 NRGFNYASLGRTKDAQTDYNQALKIDPAYTPALNNRAMLRVAEGSLKDAIADFSEIIRLR 296
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R A G+ +A+ DL A++ P I ++ A+++
Sbjct: 297 PDNVHAYNNRAAAYDKAGQPEKALADLDTAIKLAPQDGQTHKNLAIAYVNRGRWDEALKE 356
Query: 506 LSACVKLDKENKSAYTYLGLALSS-----IGEYKKAEEAHLKAIQL 546
+ L E+ + +LG L S + + KA +A KA +L
Sbjct: 357 FTTASSLLPEDVETWNWLGRLLGSHPQSDLRDGAKAVQAATKACEL 402
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 5/193 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ Q + GK A + F++ + P + A RG A + A +D+ +A++ +
Sbjct: 203 NRGLTQASLGKREEAQADFNKAIDLLPNFAPAYNNRGFNYASLGRTKDAQTDYNQALKID 262
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A R R A G +AI D S+ + P++ + R K A+ D
Sbjct: 263 PAYTPALNNRAMLRVAEGSLKDAIADFSEIIRLRPDNVHAYNNRAAAYDKAGQPEKALAD 322
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY---- 561
L +KL ++ + L +A + G + +A + A L +E W L +
Sbjct: 323 LDTAIKLAPQDGQTHKNLAIAYVNRGRWDEALKEFTTASSLLPEDVETWNWLGRLLGSHP 382
Query: 562 -QDLANSEKALEC 573
DL + KA++
Sbjct: 383 QSDLRDGAKAVQA 395
>gi|430743555|ref|YP_007202684.1| hypothetical protein Sinac_2691 [Singulisphaera acidiphila DSM
18658]
gi|430015275|gb|AGA26989.1| TPR repeat-containing protein [Singulisphaera acidiphila DSM 18658]
Length = 654
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 124/254 (48%), Gaps = 2/254 (0%)
Query: 388 GIAQVNE--GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
G+ QV G+ AI + + ++ +P P +GR A +++ E A+ DF EAI+ N
Sbjct: 144 GLGQVAHRLGQDDVAIEQYGEAIRANPSDPSGFLGRAEALVSKKDFEQALPDFGEAIRLN 203
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A LG EA+ D A+E + ++A+ RG + + + A+ D
Sbjct: 204 PRQSRAYGFRGDALWQLGRLKEALADFDNAIELDADNAEAHSRRGSLLAQLGENERALPD 263
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L A ++L+ +AY G L +G Y +A E K+I +D ++ + Y LA
Sbjct: 264 LDAVIRLNPRRAAAYKDRGGVLVRLGRYDQAIEDLNKSITIDPGRASSYQNRGAAYSGLA 323
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
EKA+ L + +++D A GL L LGQ+++A+ +++ + P+N R
Sbjct: 324 QYEKAVGDLNEAIHLDPTNPGARTNLGLALFALGQYERALAEMNEATRLAPNNSLVFLNR 383
Query: 626 ASCYHAIGEYREAV 639
A Y +G AV
Sbjct: 384 AGTYARLGLLDRAV 397
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 127/275 (46%), Gaps = 8/275 (2%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+ K K ++ R RG+A + + A A++ FD +++ P + I RG AR E E
Sbjct: 55 VLKRKPRDLEARTKRGVAYLRLNQPAQAMADFDAVIRITPWSYSSHIDRGIARVMLGEYE 114
Query: 433 AAISDFTEAI-------QSNP-SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
A DF +++ + +P S A GQ LG+ AI+ +A+ P+
Sbjct: 115 DARKDFDQSLGLLALSFKRDPTSLANAHCGLGQVAHRLGQDDVAIEQYGEAIRANPSDPS 174
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
R KDF A+ D ++L+ AY + G AL +G K+A AI
Sbjct: 175 GFLGRAEALVSKKDFEQALPDFGEAIRLNPRQSRAYGFRGDALWQLGRLKEALADFDNAI 234
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+LD + EA L +E+AL L V+ ++ R + AY RG +L LG++ +A
Sbjct: 235 ELDADNAEAHSRRGSLLAQLGENERALPDLDAVIRLNPRRAAAYKDRGGVLVRLGRYDQA 294
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I+DL+ + IDP R + Y + +Y +AV
Sbjct: 295 IEDLNKSITIDPGRASSYQNRGAAYSGLAQYEKAV 329
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 3/268 (1%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R++ +S + FR G A G+ A++ FD ++ D EA RG+ A E
Sbjct: 201 RLNPRQSRAYGFR---GDALWQLGRLKEALADFDNAIELDADNAEAHSRRGSLLAQLGEN 257
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ D I+ NP A+K RG LG +AI+DL+K++ +P A RG
Sbjct: 258 ERALPDLDAVIRLNPRRAAAYKDRGGVLVRLGRYDQAIEDLNKSITIDPGRASSYQNRGA 317
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ AV DL+ + LD N A T LGLAL ++G+Y++A +A +L N
Sbjct: 318 AYSGLAQYEKAVGDLNEAIHLDPTNPGARTNLGLALFALGQYERALAEMNEATRLAPNNS 377
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + Y L ++A+E + L +D + A+ G LG+ +AI
Sbjct: 378 LVFLNRAGTYARLGLLDRAVEDYNEALRLDPKAILAHVGLGKAQDSLGRRVQAIHSYDMA 437
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
L ++P+N R + A G+++ A+
Sbjct: 438 LQLNPTNARVYTSRGNARRAEGDWKGAL 465
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L R A V++ + A+ F + ++ +P A RG A L+ A++DF AI+
Sbjct: 177 LGRAEALVSKKDFEQALPDFGEAIRLNPRQSRAYGFRGDALWQLGRLKEALADFDNAIEL 236
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ EA RRG A LGE+ A+ DL + P A +RG V + ++ A+E
Sbjct: 237 DADNAEAHSRRGSLLAQLGENERALPDLDAVIRLNPRRAAAYKDRGGVLVRLGRYDQAIE 296
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DL+ + +D S+Y G A S + +Y+KA +AI LD A +L L
Sbjct: 297 DLNKSITIDPGRASSYQNRGAAYSGLAQYEKAVGDLNEAIHLDPTNPGARTNLGLALFAL 356
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
E+AL + + + S + R LG +A++D + L +DP I
Sbjct: 357 GQYERALAEMNEATRLAPNNSLVFLNRAGTYARLGLLDRAVEDYNEALRLDPKAI 411
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG V G+Y AI ++ + DP + RG A + + E A+ D EAI +P
Sbjct: 281 RGGVLVRLGRYDQAIEDLNKSITIDPGRASSYQNRGAAYSGLAQYEKAVGDLNEAIHLDP 340
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A G A ALG+ A+ ++++A PN++ + R + + AVED
Sbjct: 341 TNPGARTNLGLALFALGQYERALAEMNEATRLAPNNSLVFLNRAGTYARLGLLDRAVEDY 400
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD + A+ LG A S+G +A ++ A+QL+ + + +
Sbjct: 401 NEALRLDPKAILAHVGLGKAQDSLGRRVQAIHSYDMALQLNPTNARVYTSRGNARRAEGD 460
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRG 592
+ ALE + + ++ ++++AY LRG
Sbjct: 461 WKGALEDFSKAIELNPKYAEAYVLRG 486
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 103/238 (43%), Gaps = 2/238 (0%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
+AQ+ E + A+ D +++ +P A RG + AI D ++I +P
Sbjct: 251 LAQLGENE--RALPDLDAVIRLNPRRAAAYKDRGGVLVRLGRYDQAIEDLNKSITIDPGR 308
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
+++ RG A + L + +A+ DL++A+ +P + G+ F + A+ +++
Sbjct: 309 ASSYQNRGAAYSGLAQYEKAVGDLNEAIHLDPTNPGARTNLGLALFALGQYERALAEMNE 368
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+L N + + +G +A E + +A++LD + A L + L
Sbjct: 369 ATRLAPNNSLVFLNRAGTYARLGLLDRAVEDYNEALRLDPKAILAHVGLGKAQDSLGRRV 428
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+ L ++ ++ Y RG G K A++D S + ++P E LR
Sbjct: 429 QAIHSYDMALQLNPTNARVYTSRGNARRAEGDWKGALEDFSKAIELNPKYAEAYVLRG 486
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R + G+A G+Y A++ ++ + P + R A L+ A+ D+ EA++
Sbjct: 346 RTNLGLALFALGQYERALAEMNEATRLAPNNSLVFLNRAGTYARLGLLDRAVEDYNEALR 405
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+P A A G+A+ +LG V+AI AL+ P +A + RG D+ A+
Sbjct: 406 LDPKAILAHVGLGKAQDSLGRRVQAIHSYDMALQLNPTNARVYTSRGNARRAEGDWKGAL 465
Query: 504 EDLSACVKLDKENKSAYTYLGLAL 527
ED S ++L+ + AY G +L
Sbjct: 466 EDFSKAIELNPKYAEAYVLRGWSL 489
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIR------ILDSLLAQ 65
+L + + + ++D ++R++ A+A R + L L + +AI +D A
Sbjct: 253 QLGENERALPDLDAVIRLNPRRAAAYKDRGGV--LVRLGRYDQAIEDLNKSITIDPGRAS 310
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
SY+ NR YS L ++ + D ++A+ LDPT A G A ALG+ E AL+
Sbjct: 311 SYQ-----NRGAAYSGLAQYEKAVGDLNEAIHLDPTNPGARTNLGLALFALGQYERALA 364
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILD--SLLAQSYEIQ 70
L + K + +++E + +D A T + LA L +L + +A+ ++ + LA + +
Sbjct: 322 LAQYEKAVGDLNEAIHLDPTNPGART-NLGLA-LFALGQYERALAEMNEATRLAPNNSLV 379
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
NRA Y++L L + D ++AL+LDP + A++ G A +LGR+ +A+
Sbjct: 380 -FLNRAGTYARLGLLDRAVEDYNEALRLDPKAILAHVGLGKAQDSLGRRVQAI 431
>gi|392411117|ref|YP_006447724.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390624253|gb|AFM25460.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 487
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 5/258 (1%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I +D R+ +RG A G+Y AI + + ++ +P Y A RG A + +
Sbjct: 84 SKAIEIDPRMETALNNRGSAYYRLGEYDRAIKDYGRAIELNPGYGLAYYNRGNAYHGKGQ 143
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E +I DF+ AIQ +P + + RG A + E ++I+D +A++ +PN RG
Sbjct: 144 FEKSIEDFSRAIQIDPRDKDVYNNRGWAYLQVNEIDKSIEDFDRAIQLDPNYVLAYANRG 203
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K + A++DLS ++L+ E +AY G A G +A + KA+++
Sbjct: 204 NARLKSGNVEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRISPIL 263
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ + + + N +AL + + + ++ SKAY RG + +G+ KA+ D
Sbjct: 264 ADPYNNRGWVFFKKGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIGECPKALPDFDR 323
Query: 611 GLGIDPSNIECLYLRASC 628
L +DPS RA C
Sbjct: 324 ALELDPSAAAIYVFRAEC 341
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 115/269 (42%), Gaps = 39/269 (14%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I +D R +RG A + + +I FD+ ++ DP Y A RG AR
Sbjct: 152 SRAIQIDPRDKDVYNNRGWAYLQVNEIDKSIEDFDRAIQLDPNYVLAYANRGNARLKSGN 211
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E AI D + AI+ NP A+ +RG A G EA+ D +KA+ P AD + RG
Sbjct: 212 VEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRISPILADPYNNRG 271
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
V FK + A+ D+S V L+ E AYT G SIGE KA
Sbjct: 272 WVFFKKGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIGECPKA-------------- 317
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
L + ++ALE +D + Y R L + Q +A DL
Sbjct: 318 -------------LPDFDRALE-------LDPSAAAIYVFRAECLLSMHQTDRARSDLDK 357
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+DP+N E L S G+Y A+
Sbjct: 358 AYALDPTNPEILETLGSLKEIAGDYSAAL 386
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 9/230 (3%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
++A A+ + + ++ + + RG + +L A+ D+++AI+ +P A R
Sbjct: 41 EHAKAVDLLSKAIRNGVLNSDVFFRRGVSHERLGKLNEAVQDYSKAIEIDPRMETALNNR 100
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LGE AI+D +A+E P + RG F ++ED S +++D
Sbjct: 101 GSAYYRLGEYDRAIKDYGRAIELNPGYGLAYYNRGNAYHGKGQFEKSIEDFSRAIQIDPR 160
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+K Y G A + E K+ E +AIQLD N++ A+ + N E A++ L
Sbjct: 161 DKDVYNNRGWAYLQVNEIDKSIEDFDRAIQLDPNYVLAYANRGNARLKSGNVEGAIQDLS 220
Query: 576 QVLYIDKRFSKAYHLR-------GLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ + ++ F+ AY R GLL L + KA++ S + DP N
Sbjct: 221 RAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVR--ISPILADPYN 268
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 7/213 (3%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ ++AI++ + + RRG + LG+ EA+QD SKA+E +P L+ RG
Sbjct: 45 AVDLLSKAIRNGVLNSDVFFRRGVSHERLGKLNEAVQDYSKAIEIDPRMETALNNRGSAY 104
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ +++ A++D ++L+ AY G A G+++K+ E +AIQ+D +
Sbjct: 105 YRLGEYDRAIKDYGRAIELNPGYGLAYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDV 164
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ + Y + +K++E + + +D + AY RG G + AI+DLS +
Sbjct: 165 YNNRGWAYLQVNEIDKSIEDFDRAIQLDPNYVLAYANRGNARLKSGNVEGAIQDLSRAIE 224
Query: 614 IDPSNIECLYLRASCY-------HAIGEYREAV 639
++P R + Y A+ +Y +AV
Sbjct: 225 LNPEFATAYLQRGNAYVRKGLLDEALNDYNKAV 257
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 3/251 (1%)
Query: 365 NKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +S++ ++ +F L RG A V +G A++ +++ ++ P+ + R
Sbjct: 211 NVEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRISPILADPYNNR 270
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + + A+ D ++A+ NP +A+ RG ++GE +A+ D +ALE +P+
Sbjct: 271 GWVFFKKGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIGECPKALPDFDRALELDPS 330
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+A I R + A DL LD N LG G+Y A E
Sbjct: 331 AAAIYVFRAECLLSMHQTDRARSDLDKAYALDPTNPEILETLGSLKEIAGDYSAALEMFT 390
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
K + L N A L + +A+E + + +D + +AY RG+ LG
Sbjct: 391 KLVDLRPNDSAAHVDLGMALGKSGSLARAVEEFTRAIQLDPQNREAYLRRGVARDLLGDK 450
Query: 602 KKAIKDLSSGL 612
K + D ++GL
Sbjct: 451 KGSRNDFTTGL 461
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A I + +I S +GE + L E +A+ LSKA+ ++D+ RG+
Sbjct: 10 AVIFLLSISIASAQESGEELFESAKMAQKLNEHAKAVDLLSKAIRNGVLNSDVFFRRGVS 69
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ + N AV+D S +++D ++A G A +GEY +A + + +AI+L+ +
Sbjct: 70 HERLGKLNEAVQDYSKAIEIDPRMETALNNRGSAYYRLGEYDRAIKDYGRAIELNPGYGL 129
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
A+ + Y EK++E + + ID R Y+ RG + + K+I+D +
Sbjct: 130 AYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDVYNNRGWAYLQVNEIDKSIEDFDRAI 189
Query: 613 GIDPSNI 619
+DP+ +
Sbjct: 190 QLDPNYV 196
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK++S++ LS RG + G+ A+ FD+ L+ DP + R +
Sbjct: 288 SKAVSLNPELSKAYTNRGWIHKSIGECPKALPDFDRALELDPSAAAIYVFRAECLLSMHQ 347
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A SD +A +P+ E + G + G+ A++ +K ++ PN + + G
Sbjct: 348 TDRARSDLDKAYALDPTNPEILETLGSLKEIAGDYSAALEMFTKLVDLRPNDSAAHVDLG 407
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ K AVE+ + ++LD +N+ AY G+A +G+ K + +Q+
Sbjct: 408 MALGKSGSLARAVEEFTRAIQLDPQNREAYLRRGVARDLLGDKKGSRNDFTTGLQM 463
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y++A+ +F +++ P A + G A L A+ +FT AIQ +P EA+ R
Sbjct: 380 GDYSAALEMFTKLVDLRPNDSAAHVDLGMALGKSGSLARAVEEFTRAIQLDPQNREAYLR 439
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
RG AR LG+ + D + L+ + ++ L +
Sbjct: 440 RGVARDLLGDKKGSRNDFTTGLQMKEETSPRLRQ 473
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L +++KA+RI +LA Y NR + + + +RD KA+ L+P L +AY
Sbjct: 249 ALNDYNKAVRI-SPILADPYN-----NRGWVFFKKGNIAQALRDVSKAVSLNPELSKAYT 302
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRS 158
+G ++G +AL +++ E L SA E LL+ + DR+
Sbjct: 303 NRGWIHKSIGECPKALPDFDRALE--LDPSAAAIYVFRAECLLSMHQTDRA 351
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 51/116 (43%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A S D+ DP PE L G+ + + AA+ FT+ + P+ A G A
Sbjct: 351 ARSDLDKAYALDPTNPEILETLGSLKEIAGDYSAALEMFTKLVDLRPNDSAAHVDLGMAL 410
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A+++ ++A++ +P + + RG+ D + D + +++ +E
Sbjct: 411 GKSGSLARAVEEFTRAIQLDPQNREAYLRRGVARDLLGDKKGSRNDFTTGLQMKEE 466
>gi|359461395|ref|ZP_09249958.1| pentapeptide repeat-containing serine/threonine kinase
[Acaryochloris sp. CCMEE 5410]
Length = 699
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 129/259 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V L +G + +G Y A+ + +++DP EA G + +L+ +I+ +T
Sbjct: 411 VQGHLQQGDQKFAQGDYQRALREYAAAIQKDPENAEAHFNSGITKRRLNDLKGSIAHYTT 470
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ P++ +A+ RG R+ LG+ + AI D ++A+ P + RG + +
Sbjct: 471 AIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQ 530
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AA+ D S +++D + AY G+ S +G K A + + I+L+ N+ +A+ +
Sbjct: 531 AAIADYSQAIQIDAQYYEAYFNRGIVQSDLGNTKAAIADYSQVIRLNSNYAQAYNNRGIA 590
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
Y +L N + A+ Q + +D ++++AY RG LG + AI D + + ID + +
Sbjct: 591 YVNLGNLKNAIADYTQAIRVDPKYARAYTNRGTAQLTLGNKQAAIADYTQAIDIDSTYAK 650
Query: 621 CLYLRASCYHAIGEYREAV 639
R + +G+ +EA+
Sbjct: 651 AYENRGTVKGQLGKKQEAI 669
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+I+ + ++ P +A RG R+ + AAI+DFTEAI+ NP +A+ RG
Sbjct: 463 GSIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTI 522
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+ +G+ AI D S+A++ + + RGIV + AA+ D S ++L+
Sbjct: 523 YSEVGKKQAAIADYSQAIQIDAQYYEAYFNRGIVQSDLGNTKAAIADYSQVIRLNSNYAQ 582
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
AY G+A ++G K A + +AI++D + A+ + L N + A+ Q +
Sbjct: 583 AYNNRGIAYVNLGNLKNAIADYTQAIRVDPKYARAYTNRGTAQLTLGNKQAAIADYTQAI 642
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
ID ++KAY RG + LG+ ++AI+DL
Sbjct: 643 DIDSTYAKAYENRGTVKGQLGKKQEAIQDL 672
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 113/227 (49%), Gaps = 1/227 (0%)
Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
F + K N+ K + T I + K SVD +RG+ + G +AI+ F + ++
Sbjct: 449 FNSGITKRRLNDLKGSIAHYTTAI-RLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIR 507
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
+P + +A RGT + + +AAI+D+++AIQ + EA+ RG ++ LG + AI
Sbjct: 508 LNPQHVQAYNNRGTIYSEVGKKQAAIADYSQAIQIDAQYYEAYFNRGIVQSDLGNTKAAI 567
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
D S+ + N A + RGI + A+ D + +++D + AYT G A +
Sbjct: 568 ADYSQVIRLNSNYAQAYNNRGIAYVNLGNLKNAIADYTQAIRVDPKYARAYTNRGTAQLT 627
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+G + A + +AI +D + +A+ + L ++A++ LQ+
Sbjct: 628 LGNKQAAIADYTQAIDIDSTYAKAYENRGTVKGQLGKKQEAIQDLQK 674
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLRN----WSKAIRILDSLLAQSY 67
L T I + +++R++S A A R I L +L+N +++AIR+ D A++Y
Sbjct: 560 LGNTKAAIADYSQVIRLNSNYAQAYNNRGIAYVNLGNLKNAIADYTQAIRV-DPKYARAY 618
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR L + I D +A+ +D T +AY +G LG+K+EA+ +
Sbjct: 619 -----TNRGTAQLTLGNKQAAIADYTQAIDIDSTYAKAYENRGTVKGQLGKKQEAIQDLQ 673
Query: 128 K 128
K
Sbjct: 674 K 674
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ ++S+ IR L+S AQ+Y NR Y L K+ I D +A+++DP +AY
Sbjct: 565 AAIADYSQVIR-LNSNYAQAYN-----NRGIAYVNLGNLKNAIADYTQAIRVDPKYARAY 618
Query: 107 ILKGCAFSALGRKEEAL----------SVWEKGYEH 132
+G A LG K+ A+ S + K YE+
Sbjct: 619 TNRGTAQLTLGNKQAAIADYTQAIDIDSTYAKAYEN 654
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAIT----ARIELA-KLCSLRNWSKAIRILDSLL 63
++ RLN +I +R+ A R EL KL ++ ++++AIR L+
Sbjct: 454 TKRRLNDLKGSIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIR-LNPQH 512
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
Q+Y NR YS++ + I D +A+Q+D +AY +G S LG + A+
Sbjct: 513 VQAYN-----NRGTIYSEVGKKQAAIADYSQAIQIDAQYYEAYFNRGIVQSDLGNTKAAI 567
Query: 124 S 124
+
Sbjct: 568 A 568
>gi|126178012|ref|YP_001045977.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
gi|125860806|gb|ABN55995.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
Length = 562
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 119/253 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G AI +D+++ +P +A + RGTA A +R EAAI + + P
Sbjct: 116 RGHALRKIGLSPEAIECYDRVVALEPNRIDAWLARGTALAAERRYEAAIECYDRVVALEP 175
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG L +AI +A+ +PN A+ + RG K ++ A+
Sbjct: 176 KNANAWYARGTIETLLSRYEDAIASYGQAVAIDPNHAETWYNRGCALSALKRYDEAIGCF 235
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L ++ + G AL ++ Y++A + + +A +++ ++ W H + L
Sbjct: 236 DRAIALRPDDAETWYNRGRALQNLERYEEALDCYERAFRINPDYPGIWNHKATVLKKLKR 295
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ +L C + L ++ ++ +H +GLL L ++ AI+ LS L + P + + Y R
Sbjct: 296 YDLSLACFDRALRVNAVDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQPGHTDAEYYRG 355
Query: 627 SCYHAIGEYREAV 639
Y+A+G A+
Sbjct: 356 ESYYALGNCEAAI 368
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ +G A +G+Y A+ +DQ ++++ +A +G A A R A+ F
Sbjct: 7 SVEAWCKKGRAYAEQGQYDRAVECYDQAIRQNTGAGDAWYHKGLALAAARRHREALECFD 66
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ ++ +P+ G W RGQ LGE EAI +A++ P+SA+ RG K
Sbjct: 67 QVVRIDPTCGRFWLARGQTLYDLGECREAIGSCGQAVKLAPDSANAWFIRGHALRKIGLS 126
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E V L+ A+ G AL++ Y+ A E + + + L+ AW
Sbjct: 127 PEAIECYDRVVALEPNRIDAWLARGTALAAERRYEAAIECYDRVVALEPKNANAWYARGT 186
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
L+ E A+ Q + ID ++ ++ RG L L ++ +AI + + P +
Sbjct: 187 IETLLSRYEDAIASYGQAVAIDPNHAETWYNRGCALSALKRYDEAIGCFDRAIALRPDDA 246
Query: 620 ECLYLRASCYHAIGEYREAV 639
E Y R + Y EA+
Sbjct: 247 ETWYNRGRALQNLERYEEAL 266
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 119/252 (47%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R + + +RG A N +Y A+ +++ + +P YP + T
Sbjct: 234 CFDRAIALRPDDAETWYNRGRALQNLERYEEALDCYERAFRINPDYPGIWNHKATVLKKL 293
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + +++ F A++ N E W ++G L +AI+ LS+AL+ +P D +
Sbjct: 294 KRYDLSLACFDRALRVNAVDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQPGHTDAEYY 353
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + + AA++ A V+L+ EN A+ G AL + Y++A + +A+++D
Sbjct: 354 RGESYYALGNCEAAIDCYRAVVRLNPENAVAWNNCGNALYHLKHYEEALVCYERALEIDP 413
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
W + L++ +KAL C Q L + A++ +G+ L LG++ +A+
Sbjct: 414 ENRRVWNNKASVLSVLSHYDKALVCYDQELLAHPENADAWYNKGVALFVLGRYSEAVTCY 473
Query: 609 SSGLGIDPSNIE 620
+ L IDP+ E
Sbjct: 474 AHVLEIDPARAE 485
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ + +D L+RG A E +Y +AI +D+++ +P A RGT
Sbjct: 132 CYDRVVALEPNRIDAWLARGTALAAERRYEAAIECYDRVVALEPKNANAWYARGTIETLL 191
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E AI+ + +A+ +P+ E W RG A +AL EAI +A+ P+ A+ +
Sbjct: 192 SRYEDAIASYGQAVAIDPNHAETWYNRGCALSALKRYDEAIGCFDRAIALRPDDAETWYN 251
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + + A++ +++ + + + L + Y + +A++++
Sbjct: 252 RGRALQNLERYEEALDCYERAFRINPDYPGIWNHKATVLKKLKRYDLSLACFDRALRVNA 311
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E W Y L A+ECL Q L + + A + RG + LG + AI
Sbjct: 312 VDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQPGHTDAEYYRGESYYALGNCEAAIDCY 371
Query: 609 SSGLGIDPSN 618
+ + ++P N
Sbjct: 372 RAVVRLNPEN 381
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 122/305 (40%), Gaps = 34/305 (11%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ + + + +RG + +Y AI+ + Q + DP + E RG A +
Sbjct: 166 CYDRVVALEPKNANAWYARGTIETLLSRYEDAIASYGQAVAIDPNHAETWYNRGCALSAL 225
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN------- 481
+ + AI F AI P E W RG+A L EA+ +A P+
Sbjct: 226 KRYDEAIGCFDRAIALRPDDAETWYNRGRALQNLERYEEALDCYERAFRINPDYPGIWNH 285
Query: 482 ---------------------------SADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
A+I H++G++ F K + A+E LS +KL
Sbjct: 286 KATVLKKLKRYDLSLACFDRALRVNAVDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQP 345
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A Y G + ++G + A + + ++L+ AW + L + E+AL C
Sbjct: 346 GHTDAEYYRGESYYALGNCEAAIDCYRAVVRLNPENAVAWNNCGNALYHLKHYEEALVCY 405
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ L ID + ++ + +L L + KA+ L P N + Y + +G
Sbjct: 406 ERALEIDPENRRVWNNKASVLSVLSHYDKALVCYDQELLAHPENADAWYNKGVALFVLGR 465
Query: 635 YREAV 639
Y EAV
Sbjct: 466 YSEAV 470
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 111/248 (44%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C + + + + D +G+A ++ A+ FDQ+++ DP + RG
Sbjct: 30 CYDQAIRQNTGAGDAWYHKGLALAAARRHREALECFDQVVRIDPTCGRFWLARGQTLYDL 89
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E AI +A++ P + AW RG A +G S EAI+ + + EPN D
Sbjct: 90 GECREAIGSCGQAVKLAPDSANAWFIRGHALRKIGLSPEAIECYDRVVALEPNRIDAWLA 149
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + + AA+E V L+ +N +A+ G + + Y+ A ++ +A+ +D
Sbjct: 150 RGTALAAERRYEAAIECYDRVVALEPKNANAWYARGTIETLLSRYEDAIASYGQAVAIDP 209
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N E W + L ++A+ C + + + ++ ++ RG L L ++++A+
Sbjct: 210 NHAETWYNRGCALSALKRYDEAIGCFDRAIALRPDDAETWYNRGRALQNLERYEEALDCY 269
Query: 609 SSGLGIDP 616
I+P
Sbjct: 270 ERAFRINP 277
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R + ++ + +G+ +Y AI Q LK P + +A RG +
Sbjct: 302 CFDRALRVNAVDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQPGHTDAEYYRGESYYAL 361
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
EAAI + ++ NP AW G A L EA+ +ALE +P + + +
Sbjct: 362 GNCEAAIDCYRAVVRLNPENAVAWNNCGNALYHLKHYEEALVCYERALEIDPENRRVWNN 421
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ V ++ A+ + EN A+ G+AL +G Y +A + +++D
Sbjct: 422 KASVLSVLSHYDKALVCYDQELLAHPENADAWYNKGVALFVLGRYSEAVTCYAHVLEIDP 481
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVL 578
E W + L SE+ALEC L
Sbjct: 482 ARAEVWNTMGNALVILERSEEALECYDLAL 511
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%)
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++L ++ A+ G A + G+Y +A E + +AI+ + +AW H +
Sbjct: 1 MELPWKSVEAWCKKGRAYAEQGQYDRAVECYDQAIRQNTGAGDAWYHKGLALAAARRHRE 60
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
ALEC QV+ ID + + RG L+ LG+ ++AI + + P + ++R
Sbjct: 61 ALECFDQVVRIDPTCGRFWLARGQTLYDLGECREAIGSCGQAVKLAPDSANAWFIRGHAL 120
Query: 630 HAIGEYREAV 639
IG EA+
Sbjct: 121 RKIGLSPEAI 130
>gi|27376419|ref|NP_767948.1| hypothetical protein blr1308 [Bradyrhizobium japonicum USDA 110]
gi|27349559|dbj|BAC46573.1| blr1308 [Bradyrhizobium japonicum USDA 110]
Length = 458
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 5/210 (2%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP E+ RG QR L+ A++D+ +AI+ P +AW RG G++ +AI+
Sbjct: 134 DPQDAESYELRGVVYTSQRRLDRALADYDQAIKLKPGDAQAWSDRGVTYYLGGDNEKAIR 193
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
DLS+AL +PN RG K + +V D + ++LD + Y GL+L+++
Sbjct: 194 DLSEALRLDPNRPRTYTNRGAAYKKLGQLDKSVADAAEAIRLDPKVPEYYDNRGLSLAAM 253
Query: 531 GEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
G+Y KA + +A++L NF G QF + AL + L +D F++ Y
Sbjct: 254 GDYDKAIADYDQALRLAPKPNFFTNRGDSYQFKGEFG---AALSDYESALKLDPNFAQTY 310
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ R +L +G+ +KA+ D + L +DP N
Sbjct: 311 NNRAVLYKKMGERRKALADYETALKLDPGN 340
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
G +A++D+ +A+ + +A RG ++ D N A DLS ++LD ++ +Y
Sbjct: 83 GGLTQALRDIDRAIALDGKNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQDAESYE 142
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G+ +S +A + +AI+L +AW Y ++EKA+ L + L +D
Sbjct: 143 LRGVVYTSQRRLDRALADYDQAIKLKPGDAQAWSDRGVTYYLGGDNEKAIRDLSEALRLD 202
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ Y RG LGQ K++ D + + +DP E R A+G+Y +A+
Sbjct: 203 PNRPRTYTNRGAAYKKLGQLDKSVADAAEAIRLDPKVPEYYDNRGLSLAAMGDYDKAI 260
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG++ G Y AI+ +DQ L+ P P RG + F+ E AA+SD+ A++ +
Sbjct: 245 NRGLSLAAMGDYDKAIADYDQALRLAPK-PNFFTNRGDSYQFKGEFGAALSDYESALKLD 303
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
P+ + + R +GE +A+ D AL+ +P +
Sbjct: 304 PNFAQTYNNRAVLYKKMGERRKALADYETALKLDPGN 340
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ +++ + ++ DP PE RG + A + + AI+D+ +A++
Sbjct: 211 NRGAAYKKLGQLDKSVADAAEAIRLDPKVPEYYDNRGLSLAAMGDYDKAIADYDQALRLA 270
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG + GE A+ D AL+ +PN A + R ++ K + A+ D
Sbjct: 271 PKP-NFFTNRGDSYQFKGEFGAALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALAD 329
Query: 506 LSACVKLDKENKSA 519
+KLD N +A
Sbjct: 330 YETALKLDPGNDNA 343
>gi|414078285|ref|YP_006997603.1| hypothetical protein ANA_C13102 [Anabaena sp. 90]
gi|413971701|gb|AFW95790.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 1342
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 3/253 (1%)
Query: 369 CVTRISKSKSIS---VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T K+ ++S D RG ++ AI ++Q +K +P++ A R +
Sbjct: 625 ALTSFDKAITLSPNQFDLYYWRGFTLHYLKRFPEAIEAYNQSIKINPLFKFAYNVRSFSY 684
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ AI+D T+AIQ +P ++ RG L E ++I D ++A++ +P +A
Sbjct: 685 VELKNYRQAITDLTQAIQLDPKDAVSYNFRGLLYGQLEEYKQSIADSTQAIQLDPKNAKY 744
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI K++ A+ D + ++LD +N Y G+A S + +YK+ + +AIQ
Sbjct: 745 YNSRGIAYEGLKEYKQAINDYTQAIQLDPKNAKYYNSRGIAYSQLKDYKQVIADYTQAIQ 804
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
LD +G Y +L + ++A+ Q + +D + + Y LRGL L +K+AI
Sbjct: 805 LDPKDATYYGMRGGAYSELKDYKQAIADYTQAIQLDPKDAIYYSLRGLAYSKLKDYKQAI 864
Query: 606 KDLSSGLGIDPSN 618
DL+ + DP N
Sbjct: 865 SDLTETIRRDPKN 877
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 125/253 (49%), Gaps = 18/253 (7%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KYA A ++ + + P + +A +G +++ +I+ + +A++ NP+ +AWK R
Sbjct: 553 KYAEARKAVNKAIAKKPDFYQAWYFKGVIFDSEKKYPESIAAYDKALKINPNFAQAWKDR 612
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ L + EA+ KA+ PN D+ + RG K F A+E + +K++
Sbjct: 613 GRLLFTLDKYSEALTSFDKAITLSPNQFDLYYWRGFTLHYLKRFPEAIEAYNQSIKINPL 672
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---------RNFLEAWGHLTQFYQDLAN 566
K AY + + Y++A +AIQLD R L +G L ++ Q +A+
Sbjct: 673 FKFAYNVRSFSYVELKNYRQAITDLTQAIQLDPKDAVSYNFRGLL--YGQLEEYKQSIAD 730
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
S +A++ +D + +K Y+ RG+ GL ++K+AI D + + +DP N + R
Sbjct: 731 STQAIQ-------LDPKNAKYYNSRGIAYEGLKEYKQAINDYTQAIQLDPKNAKYYNSRG 783
Query: 627 SCYHAIGEYREAV 639
Y + +Y++ +
Sbjct: 784 IAYSQLKDYKQVI 796
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 2/253 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + +Y AI+ + Q +K DP GRG A F + + AI ++TEAI+ +P
Sbjct: 1013 RGNTYLLSKEYRQAINDYTQAIKIDPKNANYYSGRGIAHHFLEDYKQAIDNYTEAIKIDP 1072
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A L E AI D ++A++ +P +A RG + KD+ A+ D
Sbjct: 1073 K--KIINLRGAAYLQLKEYKLAIDDYNQAIQLDPKNAIYYGTRGDAYLQLKDYKQAINDY 1130
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD +N Y G A + +YK A + +AI++D + Y L +
Sbjct: 1131 THAIQLDPKNAIYYGTRGFAYLQLKDYKLAINDYTQAIKIDPKNATYYSARGDAYFQLKD 1190
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++A++ Q + + F++AY++RG+ + L +K+AI D + + + P E
Sbjct: 1191 HKQAIDDYTQAIKLKPDFTEAYYVRGIAHYFLKDYKQAIDDWNQAIKLKPDYPEAYTNLG 1250
Query: 627 SCYHAIGEYREAV 639
+ +GE A+
Sbjct: 1251 IVSYEMGEVETAI 1263
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 143/286 (50%), Gaps = 5/286 (1%)
Query: 359 SNEAKRNKKFCVTRISKSKSIS--VDFRLS---RGIAQVNEGKYASAISIFDQILKEDPM 413
+N+ R++K+ R + +K+I+ DF + +G+ +E KY +I+ +D+ LK +P
Sbjct: 545 ANQLWRSQKYAEARKAVNKAIAKKPDFYQAWYFKGVIFDSEKKYPESIAAYDKALKINPN 604
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ +A RG + A++ F +AI +P+ + + RG L EAI+ +
Sbjct: 605 FAQAWKDRGRLLFTLDKYSEALTSFDKAITLSPNQFDLYYWRGFTLHYLKRFPEAIEAYN 664
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
++++ P + R + K++ A+ DL+ ++LD ++ +Y + GL + EY
Sbjct: 665 QSIKINPLFKFAYNVRSFSYVELKNYRQAITDLTQAIQLDPKDAVSYNFRGLLYGQLEEY 724
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
K++ +AIQLD + + Y+ L ++A+ Q + +D + +K Y+ RG+
Sbjct: 725 KQSIADSTQAIQLDPKNAKYYNSRGIAYEGLKEYKQAINDYTQAIQLDPKNAKYYNSRGI 784
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L +K+ I D + + +DP + +R Y + +Y++A+
Sbjct: 785 AYSQLKDYKQVIADYTQAIQLDPKDATYYGMRGGAYSELKDYKQAI 830
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 120/244 (49%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY+ A++ FD+ + P + RG + + AI + ++I+ NP A+ R
Sbjct: 621 KYSEALTSFDKAITLSPNQFDLYYWRGFTLHYLKRFPEAIEAYNQSIKINPLFKFAYNVR 680
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
+ L +AI DL++A++ +P A + RG++ + +++ ++ D + ++LD +
Sbjct: 681 SFSYVELKNYRQAITDLTQAIQLDPKDAVSYNFRGLLYGQLEEYKQSIADSTQAIQLDPK 740
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N Y G+A + EYK+A + +AIQLD + + Y L + ++ +
Sbjct: 741 NAKYYNSRGIAYEGLKEYKQAINDYTQAIQLDPKNAKYYNSRGIAYSQLKDYKQVIADYT 800
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
Q + +D + + Y +RG L +K+AI D + + +DP + LR Y + +Y
Sbjct: 801 QAIQLDPKDATYYGMRGGAYSELKDYKQAIADYTQAIQLDPKDAIYYSLRGLAYSKLKDY 860
Query: 636 REAV 639
++A+
Sbjct: 861 KQAI 864
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 129/281 (45%), Gaps = 27/281 (9%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRGIA Y I+ + Q ++ DP RG A + ++ + AI+D+T+AIQ +
Sbjct: 781 SRGIAYSQLKDYKQVIADYTQAIQLDPKDATYYGMRGGAYSELKDYKQAIADYTQAIQLD 840
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--------------------- 484
P + RG A + L + +AI DL++ + +P +A
Sbjct: 841 PKDAIYYSLRGLAYSKLKDYKQAISDLTETIRRDPKNAPYTMQGLRYSEFKDIKGFLSGY 900
Query: 485 ------ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+ RG + ++ K++ A++D + +K+D +N ++Y + EYK+A +
Sbjct: 901 TGFMSTVYRTRGGIYYELKEYKLAIDDYTQAIKIDSQNANSYAIRAGIYYKLKEYKQAID 960
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ + IQ+D +G Y L ++A+ QV+ D + + Y LRG
Sbjct: 961 DYNQVIQIDPQNATYYGARGFAYFKLKEYKQAINDWSQVIKFDPKDATYYGLRGNTYLLS 1020
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++++AI D + + IDP N R +H + +Y++A+
Sbjct: 1021 KEYRQAINDYTQAIKIDPKNANYYSGRGIAHHFLEDYKQAI 1061
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 116/229 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + +Y AI ++Q ++ DP RG A ++ + AI+D+T AIQ +P
Sbjct: 1079 RGAAYLQLKEYKLAIDDYNQAIQLDPKNAIYYGTRGDAYLQLKDYKQAINDYTHAIQLDP 1138
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A L + AI D ++A++ +P +A RG F+ KD A++D
Sbjct: 1139 KNAIYYGTRGFAYLQLKDYKLAINDYTQAIKIDPKNATYYSARGDAYFQLKDHKQAIDDY 1198
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KL + AY G+A + +YK+A + +AI+L ++ EA+ +L ++
Sbjct: 1199 TQAIKLKPDFTEAYYVRGIAHYFLKDYKQAIDDWNQAIKLKPDYPEAYTNLGIVSYEMGE 1258
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
E A+ + + I+ F++A+ G+ L+G G + +K + L +D
Sbjct: 1259 VETAINYWRNAIKINSNFAEAHLALGVALYGKGDQEAGLKSAETALKLD 1307
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 5/222 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + Y AI+ + ++ DP RG A ++ + AI+D+T+AI+ +
Sbjct: 1112 TRGDAYLQLKDYKQAINDYTHAIQLDPKNAIYYGTRGFAYLQLKDYKLAINDYTQAIKID 1171
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG A L + +AI D ++A++ +P+ + + RGI ++ KD+ A++D
Sbjct: 1172 PKNATYYSARGDAYFQLKDHKQAIDDYTQAIKLKPDFTEAYYVRGIAHYFLKDYKQAIDD 1231
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL + AYT LG+ +GE + A AI+++ NF EA L
Sbjct: 1232 WNQAIKLKPDYPEAYTNLGIVSYEMGEVETAINYWRNAIKINSNFAEAHLALGVALYGKG 1291
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ E L+ + L +DKR+ K L+ +G G+ K IKD
Sbjct: 1292 DQEAGLKSAETALKLDKRYGKIEFLKE---NGWGE--KLIKD 1328
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 29/280 (10%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A Y AI+ + Q ++ DP RG A + ++ + AISD TE I+ +P
Sbjct: 816 RGGAYSELKDYKQAIADYTQAIQLDPKDAIYYSLRGLAYSKLKDYKQAISDLTETIRRDP 875
Query: 447 SAGE---------------------------AWKRRGQARAALGESVEAIQDLSKALEFE 479
++ RG L E AI D ++A++ +
Sbjct: 876 KNAPYTMQGLRYSEFKDIKGFLSGYTGFMSTVYRTRGGIYYELKEYKLAIDDYTQAIKID 935
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
+A+ R + +K K++ A++D + +++D +N + Y G A + EYK+A
Sbjct: 936 SQNANSYAIRAGIYYKLKEYKQAIDDYNQVIQIDPQNATYYGARGFAYFKLKEYKQAIND 995
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ I+ D +G Y +A+ Q + ID + + Y RG+ H L
Sbjct: 996 WSQVIKFDPKDATYYGLRGNTYLLSKEYRQAINDYTQAIKIDPKNANYYSGRGIAHHFLE 1055
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+K+AI + + + IDP I + LR + Y + EY+ A+
Sbjct: 1056 DYKQAIDNYTEAIKIDPKKI--INLRGAAYLQLKEYKLAI 1093
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++++AI+ LD A+ Y +R YSQL+ +K VI D +A+QLDP Y
Sbjct: 761 AINDYTQAIQ-LDPKNAKYYN-----SRGIAYSQLKDYKQVIADYTQAIQLDPKDATYYG 814
Query: 108 LKGCAFSALGRKEEALS 124
++G A+S L ++A++
Sbjct: 815 MRGGAYSELKDYKQAIA 831
>gi|209527262|ref|ZP_03275773.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
gi|209492329|gb|EDZ92673.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
Length = 501
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 124/255 (48%), Gaps = 1/255 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G+Y AIS +DQ LK P +A RG A + E A+S + +A++
Sbjct: 199 NRGVALSYSGEYKQAISSYDQALKYKPDLHKAWFSRGNALYHLGKYEQALSSYDQALKYK 258
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG+A + LGE +A+ +AL+++P+ + RG + ++ A+
Sbjct: 259 PDLHKAWFNRGKALSDLGEYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQALSS 318
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR-NFLEAWGHLTQFYQDL 564
+K + A+ G AL +GEYK+A ++ +A++ + ++ E W L
Sbjct: 319 YDQALKYKPDLHKAWFSRGNALYHLGEYKQALSSYDQALKYKKPDYHEPWFSRGNALYHL 378
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ Q L A+ RG L LG++K+AI L P + Y
Sbjct: 379 GEYKQAISSYDQALTYKPDDHVAWFNRGNALSYLGEYKQAISSYDEALKYKPDDHVAWYN 438
Query: 625 RASCYHAIGEYREAV 639
R + + +GEY++A+
Sbjct: 439 RGNALYHLGEYKQAI 453
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
SRG A + GKY A+S +DQ LK P +A RG A + E + A+S + EA++
Sbjct: 232 FSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQALSSYDEALKY 291
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P E W RG A LGE +A+ +AL+++P+ RG + ++ A+
Sbjct: 292 KPDFHEPWFSRGNALYHLGEYKQALSSYDQALKYKPDLHKAWFSRGNALYHLGEYKQALS 351
Query: 505 DLSACVKLDKEN-KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+K K + + G AL +GEYK+A ++ +A+ + AW +
Sbjct: 352 SYDQALKYKKPDYHEPWFSRGNALYHLGEYKQAISSYDQALTYKPDDHVAWFNRGNALSY 411
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L ++A+ + L A++ RG L+ LG++K+AI L P + Y
Sbjct: 412 LGEYKQAISSYDEALKYKPDDHVAWYNRGNALYHLGEYKQAISSYDQALKYKPDDHVAWY 471
Query: 624 LRASCYHAIGEYREAV 639
R + +GEY++A+
Sbjct: 472 NRGNALSDLGEYKQAI 487
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 13/259 (5%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + + G AIS +++ ++ P +A RG A ++ E + AIS + +A++ P
Sbjct: 167 GLQRYDNGDVRGAISSWEKAIEFQPDDHKAWYNRGVALSYSGEYKQAISSYDQALKYKPD 226
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+AW RG A LG+ +A+ +AL+++P+ RG ++ A+
Sbjct: 227 LHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQALSSYD 286
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQF 560
+K + + G AL +GEYK+A ++ +A++ + +AW HL ++
Sbjct: 287 EALKYKPDFHEPWFSRGNALYHLGEYKQALSSYDQALKYKPDLHKAWFSRGNALYHLGEY 346
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
Q L++ ++AL+ Y + + + RG L+ LG++K+AI L P +
Sbjct: 347 KQALSSYDQALK------YKKPDYHEPWFSRGNALYHLGEYKQAISSYDQALTYKPDDHV 400
Query: 621 CLYLRASCYHAIGEYREAV 639
+ R + +GEY++A+
Sbjct: 401 AWFNRGNALSYLGEYKQAI 419
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A + G+Y A+S +D+ LK P + E RG A E + A+S + +A++
Sbjct: 266 FNRGKALSDLGEYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQALSSYDQALKY 325
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDFNAAV 503
P +AW RG A LGE +A+ +AL+++ P+ + RG + ++ A+
Sbjct: 326 KPDLHKAWFSRGNALYHLGEYKQALSSYDQALKYKKPDYHEPWFSRGNALYHLGEYKQAI 385
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ ++ A+ G ALS +GEYK+A ++ +A++ + AW +
Sbjct: 386 SSYDQALTYKPDDHVAWFNRGNALSYLGEYKQAISSYDEALKYKPDDHVAWYNRGNALYH 445
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
L ++A+ Q L A++ RG L LG++K+AI L I+
Sbjct: 446 LGEYKQAISSYDQALKYKPDDHVAWYNRGNALSDLGEYKQAISSYDEALNIN 497
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
SRG A + G+Y A+S +DQ LK + P Y E RG A E + AIS + +A+
Sbjct: 334 FSRGNALYHLGEYKQALSSYDQALKYKKPDYHEPWFSRGNALYHLGEYKQAISSYDQALT 393
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P AW RG A + LGE +AI +AL+++P+ + RG + ++ A+
Sbjct: 394 YKPDDHVAWFNRGNALSYLGEYKQAISSYDEALKYKPDDHVAWYNRGNALYHLGEYKQAI 453
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+K ++ A+ G ALS +GEYK+A ++ +A+ ++R
Sbjct: 454 SSYDQALKYKPDDHVAWYNRGNALSDLGEYKQAISSYDEALNINR 498
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 1/199 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ- 443
SRG A + G+Y A+S +DQ LK P +A RG A E + A+S + +A++
Sbjct: 300 FSRGNALYHLGEYKQALSSYDQALKYKPDLHKAWFSRGNALYHLGEYKQALSSYDQALKY 359
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P E W RG A LGE +AI +AL ++P+ RG ++ A+
Sbjct: 360 KKPDYHEPWFSRGNALYHLGEYKQAISSYDQALTYKPDDHVAWFNRGNALSYLGEYKQAI 419
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+K ++ A+ G AL +GEYK+A ++ +A++ + AW + D
Sbjct: 420 SSYDEALKYKPDDHVAWYNRGNALYHLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSD 479
Query: 564 LANSEKALECLQQVLYIDK 582
L ++A+ + L I++
Sbjct: 480 LGEYKQAISSYDEALNINR 498
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 91/194 (46%)
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + W G R G+ AI KA+EF+P+ + RG+ ++ A+
Sbjct: 157 PADAKKWFNDGLQRYDNGDVRGAISSWEKAIEFQPDDHKAWYNRGVALSYSGEYKQAISS 216
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A+ G AL +G+Y++A ++ +A++ + +AW + + DL
Sbjct: 217 YDQALKYKPDLHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLG 276
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL + L F + + RG L+ LG++K+A+ L P + + R
Sbjct: 277 EYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQALSSYDQALKYKPDLHKAWFSR 336
Query: 626 ASCYHAIGEYREAV 639
+ + +GEY++A+
Sbjct: 337 GNALYHLGEYKQAL 350
>gi|19705092|ref|NP_602587.1| hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19713016|gb|AAL93886.1| Tetratricopeptide repeat family protein [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 628
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 5/232 (2%)
Query: 377 KSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +D + RG + KY AI +++ +K DP RG +++
Sbjct: 120 KAIKLDPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAY 179
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+I D+ +AI+ +P+ + RG A L + EAI D +KA++ PN+A + RG
Sbjct: 180 NKSIEDYNKAIKLDPNNAFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGF 239
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K K + A+ D +KLD N S + G+A +++GEY KA E + KAI+L+ N+
Sbjct: 240 TYNKLKKYKEAINDYDKAIKLDPNNASYFNNRGVAYNNLGEYSKALEDYDKAIKLNPNYT 299
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
A+ + + +L E+A+ + + +D + A R L L +K
Sbjct: 300 FAYNNKGITFDNLGEFEEAIMNYNKAIELDPSYKSAIENRNFSLKELENFRK 351
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 130/258 (50%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ +R + KY AI +D+ +K +P RG + + AI D+ +AI
Sbjct: 63 YYYNRACSYYCSNKYDKAIEDYDKAIKLNPNDACYFNNRGHSYFALNKYSEAIEDYDKAI 122
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ +P+ + +RG + AL + +AI+D +KA++ +PN+A RG + + K +N +
Sbjct: 123 KLDPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAYNKS 182
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ED + +KLD N Y GLA + +YK+A + KAI+L+ N + Y
Sbjct: 183 IEDYNKAIKLDPNNAFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYN 242
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
L ++A+ + + +D + ++ RG+ + LG++ KA++D + ++P+
Sbjct: 243 KLKKYKEAINDYDKAIKLDPNNASYFNNRGVAYNNLGEYSKALEDYDKAIKLNPNYTFAY 302
Query: 623 YLRASCYHAIGEYREAVI 640
+ + +GE+ EA++
Sbjct: 303 NNKGITFDNLGEFEEAIM 320
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 127/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG++ KY AI+ +++ ++ + R + + + AI D+ +AI+ N
Sbjct: 32 NRGLSYFLLKKYEEAINDYNRAIELNLNNASYYYNRACSYYCSNKYDKAIEDYDKAIKLN 91
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + RG + AL + EAI+D KA++ +PN+A ++RG + ++ A+ED
Sbjct: 92 PNDACYFNNRGHSYFALNKYSEAIEDYDKAIKLDPNNASYYYKRGFSYYALNKYDKAIED 151
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KLD N + ++ G Y K+ E + KAI+LD N + + Y+ L
Sbjct: 152 YNKAIKLDPNNAAYFSSRGDIYYYEKAYNKSIEDYNKAIKLDPNNAFYYDNRGLAYEKLK 211
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ + + ++ + + RG + L ++K+AI D + +DP+N R
Sbjct: 212 KYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKLKKYKEAINDYDKAIKLDPNNASYFNNR 271
Query: 626 ASCYHAIGEYREAV 639
Y+ +GEY +A+
Sbjct: 272 GVAYNNLGEYSKAL 285
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 119/233 (51%), Gaps = 2/233 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + KY+ AI +D+ +K DP RG + + + AI D+ +AI+ +
Sbjct: 100 NRGHSYFALNKYSEAIEDYDKAIKLDPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLD 159
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + RG ++I+D +KA++ +PN+A RG+ K K + A+ D
Sbjct: 160 PNNAAYFSSRGDIYYYEKAYNKSIEDYNKAIKLDPNNAFYYDNRGLAYEKLKKYKEAIND 219
Query: 506 LSACVKLDKENKSAYTY-LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +KL+ N + Y Y G + + +YK+A + KAI+LD N + + Y +L
Sbjct: 220 YNKAIKLNPNN-AFYCYNRGFTYNKLKKYKEAINDYDKAIKLDPNNASYFNNRGVAYNNL 278
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
KALE + + ++ ++ AY+ +G+ LG+ ++AI + + + +DPS
Sbjct: 279 GEYSKALEDYDKAIKLNPNYTFAYNNKGITFDNLGEFEEAIMNYNKAIELDPS 331
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A KY AI+ +++ +K +P RG ++ + AI+D+ +AI+ +
Sbjct: 202 NRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKLKKYKEAINDYDKAIKLD 261
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + RG A LGE +A++D KA++ PN + +GI +F A+ +
Sbjct: 262 PNNASYFNNRGVAYNNLGEYSKALEDYDKAIKLNPNYTFAYNNKGITFDNLGEFEEAIMN 321
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKK-------------------------AEEAH 540
+ ++LD KSA +L + ++K A+ H
Sbjct: 322 YNKAIELDPSYKSAIENRNFSLKELENFRKNNQKSRNNSKIDEISEAQYQTDFNNAKALH 381
Query: 541 LKAIQLDRNFLEAWGHLTQF---YQDLANSEKALECL 574
L+ ++D NF +A + F YQ+L N +ALE L
Sbjct: 382 LQG-EIDDNFKKAEKEFSSFINNYQNLPNKPRALENL 417
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 6/170 (3%)
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++ +E EPN+ + RG+ F K + A+ D + ++L+ N S Y + +
Sbjct: 17 TEKIEKEPNNDIYYNNRGLSYFLLKKYEEAINDYNRAIELNLNNASYYYNRACSYYCSNK 76
Query: 533 YKKAEEAHLKAIQLDRN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
Y KA E + KAI+L+ N + GH Y L +A+E + + +D + Y+
Sbjct: 77 YDKAIEDYDKAIKLNPNDACYFNNRGHS---YFALNKYSEAIEDYDKAIKLDPNNASYYY 133
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG + L ++ KAI+D + + +DP+N R Y+ Y +++
Sbjct: 134 KRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAYNKSI 183
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 35/155 (22%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITAR-----IELAKLCSLRNWSKAIRILDSLL 63
S Y LNK K I + ++ +++D A+ ++R E A S+ +++KAI+ LD
Sbjct: 138 SYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAYNKSIEDYNKAIK-LDPNN 196
Query: 64 AQSYE---------------IQDI--------------CNRAFCYSQLELHKHVIRDCDK 94
A Y+ I D NR F Y++L+ +K I D DK
Sbjct: 197 AFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKLKKYKEAINDYDK 256
Query: 95 ALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
A++LDP + +G A++ LG +AL ++K
Sbjct: 257 AIKLDPNNASYFNNRGVAYNNLGEYSKALEDYDKA 291
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE 68
S + L K + I + + + ++ AS R + CS + + KAI D + +
Sbjct: 36 SYFLLKKYEEAINDYNRAIELNLNNASYYYNR-ACSYYCSNK-YDKAIEDYDKAIKLN-- 91
Query: 69 IQDIC---NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
D C NR Y L + I D DKA++LDP Y +G ++ AL + ++A+
Sbjct: 92 PNDACYFNNRGHSYFALNKYSEAIEDYDKAIKLDPNNASYYYKRGFSYYALNKYDKAIED 151
Query: 126 WEKG 129
+ K
Sbjct: 152 YNKA 155
>gi|384208606|ref|YP_005594326.1| hypothetical protein Bint_1125 [Brachyspira intermedia PWS/A]
gi|343386256|gb|AEM21746.1| TPR repeat-containing protein [Brachyspira intermedia PWS/A]
Length = 348
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 127/242 (52%), Gaps = 9/242 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A GKY +A+ F+ LK D + +G + E AI D+T++I+ +
Sbjct: 42 RGLANNKLGKYKAALKDFNTALKLDNNNADIYYNKGLTEYDMGDYEKAIKDYTKSIKLDN 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ G+ + RG AALGE ++I+D + A++ N A+ + RG+ + +D+ A+ D
Sbjct: 102 TIGDVYNNRGLCYAALGEFEKSIKDFTCAIKLNKNDAEFYYNRGLAKYNLEDYQNALMDF 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL----KAIQLDRNFLEAWGHLTQFYQ 562
++++ + +AY G + E EE + K+I++D N + A+ + +Y
Sbjct: 162 DKAIEINPKYSNAYNNRG---NVKDELNYNEEDIIADYDKSIEIDNN-INAYFNKALYYD 217
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
N EKAL +VL ID+ + +AY RG +L+ L ++ +AIKD + + +D S L
Sbjct: 218 INENYEKALNLYNKVLEIDEYYIEAYGNRGFVLYKLNKYDEAIKDCNKAIELD-SKYWIL 276
Query: 623 YL 624
YL
Sbjct: 277 YL 278
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 107/210 (50%), Gaps = 3/210 (1%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E +I + + I N E + RG A LG+ A++D + AL+ + N+ADI + +G+
Sbjct: 19 EKSIEYYDKLIFYNGDNAEIYNCRGLANNKLGKYKAALKDFNTALKLDNNNADIYYNKGL 78
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ D+ A++D + +KLD Y GL +++GE++K+ + AI+L++N
Sbjct: 79 TEYDMGDYEKAIKDYTKSIKLDNTIGDVYNNRGLCYAALGEFEKSIKDFTCAIKLNKNDA 138
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK-AIKDLSS 610
E + + +L + + AL + + I+ ++S AY+ RG + L +++ I D
Sbjct: 139 EFYYNRGLAKYNLEDYQNALMDFDKAIEINPKYSNAYNNRGNVKDELNYNEEDIIADYDK 198
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ ID +NI Y + Y+ I E E +
Sbjct: 199 SIEID-NNINA-YFNKALYYDINENYEKAL 226
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 81/154 (52%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G ++I+ K + + ++A+I + RG+ N K + AA++D + +KLD N Y
Sbjct: 16 GNYEKSIEYYDKLIFYNGDNAEIYNCRGLANNKLGKYKAALKDFNTALKLDNNNADIYYN 75
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
GL +G+Y+KA + + K+I+LD + + + Y L EK+++ + ++K
Sbjct: 76 KGLTEYDMGDYEKAIKDYTKSIKLDNTIGDVYNNRGLCYAALGEFEKSIKDFTCAIKLNK 135
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++ Y+ RGL + L ++ A+ D + I+P
Sbjct: 136 NDAEFYYNRGLAKYNLEDYQNALMDFDKAIEINP 169
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH- 556
++ ++E + + +N Y GLA + +G+YK A + A++LD N + + +
Sbjct: 17 NYEKSIEYYDKLIFYNGDNAEIYNCRGLANNKLGKYKAALKDFNTALKLDNNNADIYYNK 76
Query: 557 -LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
LT++ D+ + EKA++ + + +D Y+ RGL LG+ +K+IKD + + ++
Sbjct: 77 GLTEY--DMGDYEKAIKDYTKSIKLDNTIGDVYNNRGLCYAALGEFEKSIKDFTCAIKLN 134
Query: 616 PSNIECLYLRASCYHAIGEYREAVI 640
++ E Y R + + +Y+ A++
Sbjct: 135 KNDAEFYYNRGLAKYNLEDYQNALM 159
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 51 NWSKAIRILDSLL-AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
N+ KA+ + + +L Y I+ NR F +L + I+DC+KA++LD Y+ +
Sbjct: 221 NYEKALNLYNKVLEIDEYYIEAYGNRGFVLYKLNKYDEAIKDCNKAIELDSKYWILYLNR 280
Query: 110 GCAFSALGRK---------EEALSVWEKGYEHALHQSADLKQF 143
+K +EA K YE AL +L +F
Sbjct: 281 AEIKFEFAKKNIDDLKKLNDEAFEDINKSYELALEDEDNLNEF 323
>gi|116753411|ref|YP_842529.1| TPR repeat-containing protein [Methanosaeta thermophila PT]
gi|116664862|gb|ABK13889.1| Tetratricopeptide TPR_2 repeat protein [Methanosaeta thermophila
PT]
Length = 366
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 15/276 (5%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+S+ L + + +G Y AI +D++L DPM A GRG A E A+ +
Sbjct: 2 VSIAALLQKAEEKYLDGSYDEAIEYYDRVLDIDPMNTAAWCGRGMACFCFSRYEDALECY 61
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAI--------QDLSKALEF-------EPNSA 483
+ AI+++P AW+ R + LG EAI +D + AL + P+ A
Sbjct: 62 SRAIEADPECVPAWECRAEVLFILGRCDEAISSYQEAIDRDPAYALAWIERCIDSRPDDA 121
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ ++G+ + A+E + +D + LG +L +IG + +A E +A
Sbjct: 122 ESWRQKGLALLSMGRYEEAIEAYRMALDIDPSQARDWCILGESLQTIGRHSEALECFERA 181
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
++L + W + + ++ALEC ++ L +D +A+H +G+ +G K
Sbjct: 182 LELSPSDSACWIRMGESMHSTGRYDEALECYEEALRLDPGSVQAWHGKGITYRAMGIPSK 241
Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AI + S L +DP + + Y + + A+G Y +A+
Sbjct: 242 AIDAIDSALTLDPEHAQSWYAKGITFRAMGLYEDAL 277
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 15/259 (5%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGR---------------GTARAFQRELEAAISDFT 439
G+ AIS + + + DP Y A I R G A E AI +
Sbjct: 86 GRCDEAISSYQEAIDRDPAYALAWIERCIDSRPDDAESWRQKGLALLSMGRYEEAIEAYR 145
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A+ +PS W G++ +G EA++ +ALE P+ + G +
Sbjct: 146 MALDIDPSQARDWCILGESLQTIGRHSEALECFERALELSPSDSACWIRMGESMHSTGRY 205
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ A+E ++LD + A+ G+ ++G KA +A A+ LD ++W
Sbjct: 206 DEALECYEEALRLDPGSVQAWHGKGITYRAMGIPSKAIDAIDSALTLDPEHAQSWYAKGI 265
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
++ + E ALEC +VL ID + A R L+ LG++ +A+ + ++P +
Sbjct: 266 TFRAMGLYEDALECFDRVLRIDPGNASALKSRAWSLYNLGRYAEALSACEGAISVNPLDE 325
Query: 620 ECLYLRASCYHAIGEYREA 638
+ Y A+G Y E+
Sbjct: 326 DAWYNMGIVLKALGRYTES 344
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ +++ L+ DP +A G+G AI A+ +P ++W
Sbjct: 203 GRYDEALECYEEALRLDPGSVQAWHGKGITYRAMGIPSKAIDAIDSALTLDPEHAQSWYA 262
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC---VK 511
+G A+G +A++ + L +P +A L R + + E LSAC +
Sbjct: 263 KGITFRAMGLYEDALECFDRVLRIDPGNASALKSRA---WSLYNLGRYAEALSACEGAIS 319
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++ ++ A+ +G+ L ++G Y +++ A +KA ++
Sbjct: 320 VNPLDEDAWYNMGIVLKALGRYTESDMAFIKAREI 354
>gi|428304133|ref|YP_007140958.1| hypothetical protein Cri9333_0484 [Crinalium epipsammum PCC 9333]
gi|428245668|gb|AFZ11448.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 1192
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 128/253 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG VN+ ++ AI+ ++ +K +P Y A + RG + Q++ + AI D+ AI+ NP
Sbjct: 688 RGNVYVNQKQWDKAINDYNTAIKINPQYANAYLMRGGVYSDQKQWDKAIDDYNTAIKINP 747
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG + + +AI D + A++ N+A RG+V +K K +N A++D
Sbjct: 748 QYANAYLMRGDVYSDQKQWDKAIDDYNTAIKINSNNAWAYSARGLVYYKQKQWNKAIDDY 807
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ + AY+ GL ++ KA + + AI+++ + +A+ + +
Sbjct: 808 NTAIKINPGDAFAYSARGLVYKEQKQWDKAIDDYTTAIKINPQYADAYSLRGRVHDQQKQ 867
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+KA++ + I+ + Y LRGL+ Q KAI D ++ + I+P + +R
Sbjct: 868 WDKAIDDFTTAIKINPNNANDYSLRGLVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRG 927
Query: 627 SCYHAIGEYREAV 639
Y ++ +A+
Sbjct: 928 LVYQEQKQWDKAI 940
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 118/244 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + ++ AI ++ +K +P A RG Q++ + AI D+T AI+ N
Sbjct: 789 ARGLVYYKQKQWNKAIDDYNTAIKINPGDAFAYSARGLVYKEQKQWDKAIDDYTTAIKIN 848
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG+ + +AI D + A++ PN+A+ RG+V K ++ A++D
Sbjct: 849 PQYADAYSLRGRVHDQQKQWDKAIDDFTTAIKINPNNANDYSLRGLVYVNQKQWDKAIDD 908
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + AY+ GL ++ KA + AI+++ A+ + Y
Sbjct: 909 FTTAIKINPHDAGAYSVRGLVYQEQKQWDKAIDDFKSAIKINPGDASAYLSRGEVYSYQK 968
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+KA++ + + I+ + AY+ RG + Q AI D +S + I+P E Y R
Sbjct: 969 QWDKAIDDFKSAIKINPNDALAYYNRGNVYVNQKQWDLAINDYNSAIKINPQYAEAYYNR 1028
Query: 626 ASCY 629
Y
Sbjct: 1029 GIVY 1032
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 128/261 (49%), Gaps = 7/261 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + ++ AI + +K +P Y +A RG Q++ + AI DFT AI+ N
Sbjct: 823 ARGLVYKEQKQWDKAIDDYTTAIKINPQYADAYSLRGRVHDQQKQWDKAIDDFTTAIKIN 882
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + RG + +AI D + A++ P+ A RG+V + K ++ A++D
Sbjct: 883 PNNANDYSLRGLVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRGLVYQEQKQWDKAIDD 942
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + SAY G S ++ KA + AI+++ N A+ + Y +
Sbjct: 943 FKSAIKINPGDASAYLSRGEVYSYQKQWDKAIDDFKSAIKINPNDALAYYNRGNVYVNQK 1002
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A+ + I+ ++++AY+ RG++ + + A+ D + + I+P E + R
Sbjct: 1003 QWDLAINDYNSAIKINPQYAEAYYNRGIVYSNQKKWELALADWNQAIKINPKFAEAYFNR 1062
Query: 626 ASCYH-------AIGEYREAV 639
YH A+ +Y++A+
Sbjct: 1063 GFVYHTQENYSAALSDYKQAL 1083
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 119/255 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG ++ ++ AI ++ +K +P Y A + RG + Q++ + AI D+ AI+
Sbjct: 720 LMRGGVYSDQKQWDKAIDDYNTAIKINPQYANAYLMRGDVYSDQKQWDKAIDDYNTAIKI 779
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + A+ RG + +AI D + A++ P A RG+V + K ++ A++
Sbjct: 780 NSNNAWAYSARGLVYYKQKQWNKAIDDYNTAIKINPGDAFAYSARGLVYKEQKQWDKAID 839
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +K++ + AY+ G ++ KA + AI+++ N + Y +
Sbjct: 840 DYTTAIKINPQYADAYSLRGRVHDQQKQWDKAIDDFTTAIKINPNNANDYSLRGLVYVNQ 899
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+KA++ + I+ + AY +RGL+ Q KAI D S + I+P +
Sbjct: 900 KQWDKAIDDFTTAIKINPHDAGAYSVRGLVYQEQKQWDKAIDDFKSAIKINPGDASAYLS 959
Query: 625 RASCYHAIGEYREAV 639
R Y ++ +A+
Sbjct: 960 RGEVYSYQKQWDKAI 974
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D+ L RG+ VN+ ++ AI F +K +P A RG Q++ + AI DF A
Sbjct: 888 DYSL-RGLVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRGLVYQEQKQWDKAIDDFKSA 946
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP A+ RG+ + + +AI D A++ PN A + RG V K ++
Sbjct: 947 IKINPGDASAYLSRGEVYSYQKQWDKAIDDFKSAIKINPNDALAYYNRGNVYVNQKQWDL 1006
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D ++ +K++ + AY G+ S+ +++ A +AI+++ F EA+ + Y
Sbjct: 1007 AINDYNSAIKINPQYAEAYYNRGIVYSNQKKWELALADWNQAIKINPKFAEAYFNRGFVY 1066
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
N AL +Q L I++ A G + + +G+ + AI+ + +D E
Sbjct: 1067 HTQENYSAALSDYKQALSINENLIAAISNIGFINYEMGETEAAIQQWQKVVKVDSQQAEP 1126
Query: 622 LYLRASCYHAIGE 634
A + GE
Sbjct: 1127 QLALAVAMYTKGE 1139
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 7/262 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG ++ ++ AI ++ +K + A RG Q++ AI D+ AI+
Sbjct: 754 LMRGDVYSDQKQWDKAIDDYNTAIKINSNNAWAYSARGLVYYKQKQWNKAIDDYNTAIKI 813
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG + +AI D + A++ P AD RG V+ + K ++ A++
Sbjct: 814 NPGDAFAYSARGLVYKEQKQWDKAIDDYTTAIKINPQYADAYSLRGRVHDQQKQWDKAID 873
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +K++ N + Y+ GL + ++ KA + AI+++ + A+ YQ+
Sbjct: 874 DFTTAIKINPNNANDYSLRGLVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRGLVYQEQ 933
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+KA++ + + I+ + AY RG + Q KAI D S + I+P++ Y
Sbjct: 934 KQWDKAIDDFKSAIKINPGDASAYLSRGEVYSYQKQWDKAIDDFKSAIKINPNDALAYYN 993
Query: 625 RASCY-------HAIGEYREAV 639
R + Y AI +Y A+
Sbjct: 994 RGNVYVNQKQWDLAINDYNSAI 1015
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 115/243 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + ++ AI F +K +P A + RG ++Q++ + AI DF AI+ NP
Sbjct: 926 RGLVYQEQKQWDKAIDDFKSAIKINPGDASAYLSRGEVYSYQKQWDKAIDDFKSAIKINP 985
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG + AI D + A++ P A+ + RGIV K + A+ D
Sbjct: 986 NDALAYYNRGNVYVNQKQWDLAINDYNSAIKINPQYAEAYYNRGIVYSNQKKWELALADW 1045
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ + AY G + Y A + +A+ ++ N + A ++ ++
Sbjct: 1046 NQAIKINPKFAEAYFNRGFVYHTQENYSAALSDYKQALSINENLIAAISNIGFINYEMGE 1105
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+E A++ Q+V+ +D + ++ + ++ G+ K ++ + L +D + YL+
Sbjct: 1106 TEAAIQQWQKVVKVDSQQAEPQLALAVAMYTKGESDKGVQLAAQALKLDKQFADVAYLKQ 1165
Query: 627 SCY 629
+ +
Sbjct: 1166 NLW 1168
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + ++ AI F +K +P RG Q++ + AI DFT AI+ NP
Sbjct: 858 RGRVHDQQKQWDKAIDDFTTAIKINPNNANDYSLRGLVYVNQKQWDKAIDDFTTAIKINP 917
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG + +AI D A++ P A RG V K ++ A++D
Sbjct: 918 HDAGAYSVRGLVYQEQKQWDKAIDDFKSAIKINPGDASAYLSRGEVYSYQKQWDKAIDDF 977
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ + AY G + ++ A + AI+++ + EA+ + Y +
Sbjct: 978 KSAIKINPNDALAYYNRGNVYVNQKQWDLAINDYNSAIKINPQYAEAYYNRGIVYSNQKK 1037
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E AL Q + I+ +F++AY RG + H + A+ D L I+ + I +
Sbjct: 1038 WELALADWNQAIKINPKFAEAYFNRGFVYHTQENYSAALSDYKQALSINENLIAAISNIG 1097
Query: 627 SCYHAIGEYREAV 639
+ +GE A+
Sbjct: 1098 FINYEMGETEAAI 1110
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 111/253 (43%), Gaps = 1/253 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + KY+ A + + P Y AL + ++L+ A+ +AI P
Sbjct: 587 RGLVLYAQKKYSEASVAISTAISKKPDYYPALKLQSQVLTQLKQLDEALVAIEKAIVIQP 646
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + + L EAI + K ++ P +A + RG V K ++ A+ D
Sbjct: 647 QDPNLYFIKTSILSDLKRYPEAIATIQKGIDISPRAA-LYWIRGNVYVNQKQWDKAINDY 705
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ + +AY G S ++ KA + + AI+++ + A+ Y D
Sbjct: 706 NTAIKINPQYANAYLMRGGVYSDQKQWDKAIDDYNTAIKINPQYANAYLMRGDVYSDQKQ 765
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+KA++ + I+ + AY RGL+ + Q KAI D ++ + I+P + R
Sbjct: 766 WDKAIDDYNTAIKINSNNAWAYSARGLVYYKQKQWNKAIDDYNTAIKINPGDAFAYSARG 825
Query: 627 SCYHAIGEYREAV 639
Y ++ +A+
Sbjct: 826 LVYKEQKQWDKAI 838
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 34/165 (20%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI N+ K+ A++ ++Q +K +P + EA RG Q AA+SD+ +A+ N
Sbjct: 1027 NRGIVYSNQKKWELALADWNQAIKINPKFAEAYFNRGFVYHTQENYSAALSDYKQALSIN 1086
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + AI ++ G +N++ + AA++
Sbjct: 1087 ENL-----------------IAAISNI-----------------GFINYEMGETEAAIQQ 1112
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
VK+D + L +A+ + GE K + +A++LD+ F
Sbjct: 1113 WQKVVKVDSQQAEPQLALAVAMYTKGESDKGVQLAAQALKLDKQF 1157
>gi|428320482|ref|YP_007118364.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428244162|gb|AFZ09948.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 1011
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 34/288 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G+ A AIS ++Q + DP A + RG + E E AISD+ +AI+ N
Sbjct: 624 NRGSAKYELGQKAEAISDYNQAIDLDPKLAIAYVERGYVKYDLGEKEEAISDYNQAIELN 683
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN------------ 493
P+ +A+ RG A +ALG++ + + D ++A+E PN +D + R + N
Sbjct: 684 PNYADAYYTRGLANSALGKTEDPLADRTQAIELNPNYSDAYYTRSVANSALETAEEILVD 743
Query: 494 ------FKFKDFNA----------------AVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ NA A+ D + ++L+ ++ AY GLA ++G
Sbjct: 744 YTQALDLNYNSANAYFRRGSSKSDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLG 803
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
E ++A + +AI L+ + +A+ + L +E+A+ Q L ++ ++ AY R
Sbjct: 804 ENEEALADYNQAIHLNSCYADAYNNRGLAKSFLGQTEEAIADYNQALDLNSCYADAYLNR 863
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
GL LGQ +AI D + + IDP R + A+GE EA+
Sbjct: 864 GLAKSALGQKAEAIADYNQAIDIDPKLAVAYNNRGNTKSALGEKTEAI 911
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 125/539 (23%), Positives = 238/539 (44%), Gaps = 61/539 (11%)
Query: 18 KTICEIDELVRVDSVMASAITAR--IELA---KLCSLRNWSKAIRILDSLLAQSYEIQDI 72
+ + + ++ + +D +++A R ++ A K +L ++++AI L+ + +Y
Sbjct: 501 EALADYNQAIHLDPKLSAAYVNRGIVKSALGHKAEALADYNQAIH-LEPKFSAAY----- 554
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
NR S L I D ++A++L+P L AY+ +G A S LG K EA+S
Sbjct: 555 VNRGMVKSDLGQKAEAISDYNQAIELNPKLALAYVNRGAAKSELGHKAEAIS-------- 606
Query: 133 ALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMS--ETSE 190
D Q L+L+ L A +R + +Y++ +++ ++ + K++
Sbjct: 607 ------DYNQALDLDPKLAVAYANRG-SAKYELGQKAEAISDYNQAIDLDPKLAIAYVER 659
Query: 191 NHNKSDICDSSSQSRDVSETCSKSSHDPD--LCNGRSDEAKGGSSVPVSKSGLHINGKLR 248
+ K D+ + D ++ + + D G ++ A G + P++ I
Sbjct: 660 GYVKYDLGEKEEAISDYNQAIELNPNYADAYYTRGLANSALGKTEDPLADRTQAI----- 714
Query: 249 EVSENH-NGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDV 307
E++ N+ + S + A A EI + D+ + S N + R+ + DV
Sbjct: 715 ELNPNYSDAYYTRSVANSALETAEEILVDYTQALDL-----NYNSANA-YFRRGSSKSDV 768
Query: 308 HDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKK 367
K + ++ D N E K +++ N + K+++ + A N+
Sbjct: 769 EKK----AEAIADYNQAIELNPKDAVAYNNRGLA---------KYNLGENEEALADYNQA 815
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
+ S D +RG+A+ G+ AI+ ++Q L + Y +A + RG A++
Sbjct: 816 IHLN------SCYADAYNNRGLAKSFLGQTEEAIADYNQALDLNSCYADAYLNRGLAKSA 869
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ AI+D+ +AI +P A+ RG ++ALGE EAI D +KA+E + +
Sbjct: 870 LGQKAEAIADYNQAIDIDPKLAVAYNNRGNTKSALGEKTEAIADYTKAIELNYYNPHPYY 929
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
RG+ + + AA+ D S ++L N AY GLA S +G+ +A + KA L
Sbjct: 930 NRGLTKYNLGEQEAAIADYSKVIELSYYNAHAYYNRGLAKSDLGQKAEAIADYQKAADL 988
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 129/255 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+ + + G+ A AIS ++Q ++ +P A + RG A++ AISD+ +A+
Sbjct: 555 VNRGMVKSDLGQKAEAISDYNQAIELNPKLALAYVNRGAAKSELGHKAEAISDYNQALDL 614
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG A+ LG+ EAI D ++A++ +P A ERG V + + A+
Sbjct: 615 DPKLAVAYANRGSAKYELGQKAEAISDYNQAIDLDPKLAIAYVERGYVKYDLGEKEEAIS 674
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ AY GLA S++G+ + +AI+L+ N+ +A+ + L
Sbjct: 675 DYNQAIELNPNYADAYYTRGLANSALGKTEDPLADRTQAIELNPNYSDAYYTRSVANSAL 734
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+E+ L Q L ++ + AY RG + + +AI D + + ++P +
Sbjct: 735 ETAEEILVDYTQALDLNYNSANAYFRRGSSKSDVEKKAEAIADYNQAIELNPKDAVAYNN 794
Query: 625 RASCYHAIGEYREAV 639
R + +GE EA+
Sbjct: 795 RGLAKYNLGENEEAL 809
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 131/254 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ R + + GK A+S + + + D A +GRG ++ E AI+D+T+AI+
Sbjct: 181 VGRALVKHELGKKEEALSDYTKAIDLDSKLDVAYVGRGLVKSELEEKAEAIADYTKAIEL 240
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+K RG A+ +LG EA+ D ++A++ +PN AD + RG V ++ + A
Sbjct: 241 NPKDVGAYKNRGLAKFSLGRIEEALADYNQAIDLDPNDADAYNNRGKVKYELGEKEEARA 300
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D L+ + AY GLA G+ ++A + +AI L+ N+ +A+ + +L
Sbjct: 301 DFVKANNLNPKLAVAYYTQGLAKYREGKIEEAIANYNQAIDLNPNYADAYHNRGLAKYNL 360
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+A+ Q + ++ + + Y+ RGL LG+ ++A+ D + + +D ++ +
Sbjct: 361 EKREEAIADYNQAIDLNPKLAAGYNNRGLAKSRLGRIEEALADYNQAIELDANDADAYNN 420
Query: 625 RASCYHAIGEYREA 638
R + + +G +EA
Sbjct: 421 RGNVKYELGAKQEA 434
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 4/256 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A+ EGK AI+ ++Q + +P Y +A RG A+ + E AI+D+ +AI N
Sbjct: 318 TQGLAKYREGKIEEAIANYNQAIDLNPNYADAYHNRGLAKYNLEKREEAIADYNQAIDLN 377
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG A++ LG EA+ D ++A+E + N AD + RG V ++ A D
Sbjct: 378 PKLAAGYNNRGLAKSRLGRIEEALADYNQAIELDANDADAYNNRGNVKYELGAKQEARAD 437
Query: 506 LSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
L+ K A+ Y G+ S + E +A A A+ L+ A+ +
Sbjct: 438 FVKANDLNP--KLAFVYFKRGVGKSELAEKAEALAAFSNAVNLNPKLAVAYLLRGNIKGE 495
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ N E+AL Q +++D + S AY RG++ LG +A+ D + + ++P
Sbjct: 496 IGNQEEALADYNQAIHLDPKLSAAYVNRGIVKSALGHKAEALADYNQAIHLEPKFSAAYV 555
Query: 624 LRASCYHAIGEYREAV 639
R +G+ EA+
Sbjct: 556 NRGMVKSDLGQKAEAI 571
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 10/237 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ + + GK A+S ++Q + DP A +GR + + E A+SD+T+AI
Sbjct: 147 LNRGLTKSSLGKKEEALSDYNQAIDLDPKRAAAYVGRALVKHELGKKEEALSDYTKAIDL 206
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ A+ RG ++ L E EAI D +KA+E P RG+ F A+
Sbjct: 207 DSKLDVAYVGRGLVKSELEEKAEAIADYTKAIELNPKDVGAYKNRGLAKFSLGRIEEALA 266
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + LD + AY G +GE ++A +KA L+ A+ + Q L
Sbjct: 267 DYNQAIDLDPNDADAYNNRGKVKYELGEKEEARADFVKANNLNPKLAVAY-----YTQGL 321
Query: 565 ANS-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
A E+A+ Q + ++ ++ AYH RGL + L + ++AI D + + ++P
Sbjct: 322 AKYREGKIEEAIANYNQAIDLNPNYADAYHNRGLAKYNLEKREEAIADYNQAIDLNP 378
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 140/655 (21%), Positives = 266/655 (40%), Gaps = 69/655 (10%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDSL 62
++Y+L K + + + ++ + ++ +ASA R L K +L ++++AI LD
Sbjct: 118 AKYKLGKIEEALSDYNQAIELNPKLASAYLNR-GLTKSSLGKKEEALSDYNQAID-LDPK 175
Query: 63 LAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
A +Y RA +L + + D KA+ LD L AY+ +G S L K EA
Sbjct: 176 RAAAY-----VGRALVKHELGKKEEALSDYTKAIDLDSKLDVAYVGRGLVKSELEEKAEA 230
Query: 123 LSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESG--LN 180
+ AD + +EL A ++R + ++ + +L L+
Sbjct: 231 I--------------ADYTKAIELNPKDVGAYKNRGL-AKFSLGRIEEALADYNQAIDLD 275
Query: 181 ANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSG 240
ND + + K ++ + D ++ +P L V G
Sbjct: 276 PNDADAYNNRGKVKYELGEKEEARADF---VKANNLNPKLA------------VAYYTQG 320
Query: 241 L--HINGKLREVSENHNGSSDGSKS---THASRDASEINRQSSD----DFD--------I 283
L + GK+ E N+N + D + + + +R ++ N + + D++ +
Sbjct: 321 LAKYREGKIEEAIANYNQAIDLNPNYADAYHNRGLAKYNLEKREEAIADYNQAIDLNPKL 380
Query: 284 CNGPIDKASVNERHGRQTNGTHDVHDKLSSDS----ASLNDSNTNSESYSKSSISDN--K 337
G ++ R GR D + + D+ A N N E +K + K
Sbjct: 381 AAGYNNRGLAKSRLGRIEEALADYNQAIELDANDADAYNNRGNVKYELGAKQEARADFVK 440
Query: 338 SSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKY 397
++D + + FK + K E ++ + ++V + L RG + G
Sbjct: 441 ANDLNPKLAFVYFKRGVGKSELAEKAEALAAFSNAVNLNPKLAVAYLL-RGNIKGEIGNQ 499
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
A++ ++Q + DP A + RG ++ A++D+ +AI P A+ RG
Sbjct: 500 EEALADYNQAIHLDPKLSAAYVNRGIVKSALGHKAEALADYNQAIHLEPKFSAAYVNRGM 559
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
++ LG+ EAI D ++A+E P A RG + A+ D + + LD +
Sbjct: 560 VKSDLGQKAEAISDYNQAIELNPKLALAYVNRGAAKSELGHKAEAISDYNQALDLDPKLA 619
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
AY G A +G+ +A + +AI LD A+ DL E+A+ Q
Sbjct: 620 VAYANRGSAKYELGQKAEAISDYNQAIDLDPKLAIAYVERGYVKYDLGEKEEAISDYNQA 679
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+ ++ ++ AY+ RGL LG+ + + D + + ++P+ + Y R+ A+
Sbjct: 680 IELNPNYADAYYTRGLANSALGKTEDPLADRTQAIELNPNYSDAYYTRSVANSAL 734
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 6/258 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A+ G A AIS ++Q L DP A RG+A+ + AISD+ +AI
Sbjct: 589 VNRGAAKSELGHKAEAISDYNQALDLDPKLAVAYANRGSAKYELGQKAEAISDYNQAIDL 648
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG + LGE EAI D ++A+E PN AD + RG+ N +
Sbjct: 649 DPKLAIAYVERGYVKYDLGEKEEAISDYNQAIELNPNYADAYYTRGLANSALGKTEDPLA 708
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFY 561
D + ++L+ AY +A S++ + AEE + +A+ L+ N A+
Sbjct: 709 DRTQAIELNPNYSDAYYTRSVANSAL---ETAEEILVDYTQALDLNYNSANAYFRRGSSK 765
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
D+ +A+ Q + ++ + + AY+ RGL + LG++++A+ D + + ++ +
Sbjct: 766 SDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLGENEEALADYNQAIHLNSCYADA 825
Query: 622 LYLRASCYHAIGEYREAV 639
R +G+ EA+
Sbjct: 826 YNNRGLAKSFLGQTEEAI 843
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 126/260 (48%), Gaps = 1/260 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG+A GK ++ Q ++ +P Y +A R A + E + D+T+
Sbjct: 687 ADAYYTRGLANSALGKTEDPLADRTQAIELNPNYSDAYYTRSVANSALETAEEILVDYTQ 746
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ N ++ A+ RRG +++ + + EAI D ++A+E P A + RG+ + +
Sbjct: 747 ALDLNYNSANAYFRRGSSKSDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLGENE 806
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D + + L+ AY GLA S +G+ ++A + +A+ L+ + +A+ +
Sbjct: 807 EALADYNQAIHLNSCYADAYNNRGLAKSFLGQTEEAIADYNQALDLNSCYADAYLNRGLA 866
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
L +A+ Q + ID + + AY+ RG LG+ +AI D + + ++ N
Sbjct: 867 KSALGQKAEAIADYNQAIDIDPKLAVAYNNRGNTKSALGEKTEAIADYTKAIELNYYNPH 926
Query: 621 CLYLRASCYHAIGEYREAVI 640
Y R + +GE +EA I
Sbjct: 927 PYYNRGLTKYNLGE-QEAAI 945
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 138/262 (52%), Gaps = 9/262 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ GK A+S ++Q ++ +P A + RG ++ + E A+SD+ +AI +
Sbjct: 114 NRGLAKYKLGKIEEALSDYNQAIELNPKLASAYLNRGLTKSSLGKKEEALSDYNQAIDLD 173
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH-ERGIVNFKFKDFNAAVE 504
P A+ R + LG+ EA+ D +KA++ + + D+ + RG+V + ++ A+
Sbjct: 174 PKRAAAYVGRALVKHELGKKEEALSDYTKAIDLD-SKLDVAYVGRGLVKSELEEKAEAIA 232
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ ++ AY GLA S+G ++A + +AI LD N +A+ + + +L
Sbjct: 233 DYTKAIELNPKDVGAYKNRGLAKFSLGRIEEALADYNQAIDLDPNDADAYNNRGKVKYEL 292
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+A + ++ + + AY+ +GL + G+ ++AI + + + ++P+ + +
Sbjct: 293 GEKEEARADFVKANNLNPKLAVAYYTQGLAKYREGKIEEAIANYNQAIDLNPNYADAYHN 352
Query: 625 RASCYH-------AIGEYREAV 639
R + AI +Y +A+
Sbjct: 353 RGLAKYNLEKREEAIADYNQAI 374
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N K AI+ ++Q + +P RG A++ +E A++D+ +AI+ +
Sbjct: 352 NRGLAKYNLEKREEAIADYNQAIDLNPKLAAGYNNRGLAKSRLGRIEEALADYNQAIELD 411
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG + LG EA D KA + P A + +RG+ + + A+
Sbjct: 412 ANDADAYNNRGNVKYELGAKQEARADFVKANDLNPKLAFVYFKRGVGKSELAEKAEALAA 471
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S V L+ + AY G IG ++A + +AI LD A+ + L
Sbjct: 472 FSNAVNLNPKLAVAYLLRGNIKGEIGNQEEALADYNQAIHLDPKLSAAYVNRGIVKSALG 531
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ +AL Q ++++ +FS AY RG++ LGQ +AI D + + ++P R
Sbjct: 532 HKAEALADYNQAIHLEPKFSAAYVNRGMVKSDLGQKAEAISDYNQAIELNPKLALAYVNR 591
Query: 626 ASCYHAIGEYREAV 639
+ +G EA+
Sbjct: 592 GAAKSELGHKAEAI 605
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 124/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ + G+ A++ ++Q + DP +A RG + E E A +DF +A N
Sbjct: 250 NRGLAKFSLGRIEEALADYNQAIDLDPNDADAYNNRGKVKYELGEKEEARADFVKANNLN 309
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ +G A+ G+ EAI + ++A++ PN AD H RG+ + + A+ D
Sbjct: 310 PKLAVAYYTQGLAKYREGKIEEAIANYNQAIDLNPNYADAYHNRGLAKYNLEKREEAIAD 369
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + + Y GLA S +G ++A + +AI+LD N +A+ + +L
Sbjct: 370 YNQAIDLNPKLAAGYNNRGLAKSRLGRIEEALADYNQAIELDANDADAYNNRGNVKYELG 429
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A + ++ + + Y RG+ L + +A+ S+ + ++P LR
Sbjct: 430 AKQEARADFVKANDLNPKLAFVYFKRGVGKSELAEKAEALAAFSNAVNLNPKLAVAYLLR 489
Query: 626 ASCYHAIGEYREAV 639
+ IG EA+
Sbjct: 490 GNIKGEIGNQEEAL 503
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 114/230 (49%), Gaps = 4/230 (1%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P + +A RG A+ ++E A+SD+ +AI+ NP A+ RG +++LG+ EA+ D
Sbjct: 106 PTFADAYNNRGLAKYKLGKIEEALSDYNQAIELNPKLASAYLNRGLTKSSLGKKEEALSD 165
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
++A++ +P A R +V + A+ D + + LD + AY GL S +
Sbjct: 166 YNQAIDLDPKRAAAYVGRALVKHELGKKEEALSDYTKAIDLDSKLDVAYVGRGLVKSELE 225
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
E +A + KAI+L+ + A+ + L +F L E+AL Q + +D + AY+
Sbjct: 226 EKAEAIADYTKAIELNPKDVGAYKNRGLAKF--SLGRIEEALADYNQAIDLDPNDADAYN 283
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG + + LG+ ++A D ++P Y + + G+ EA+
Sbjct: 284 NRGKVKYELGEKEEARADFVKANNLNPKLAVAYYTQGLAKYREGKIEEAI 333
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 8/232 (3%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S + RG ++ + K A AI+ ++Q ++ +P A RG A+ E E A++D+
Sbjct: 754 SANAYFRRGSSKSDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLGENEEALADYN 813
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI N +A+ RG A++ LG++ EAI D ++AL+ AD RG+
Sbjct: 814 QAIHLNSCYADAYNNRGLAKSFLGQTEEAIADYNQALDLNSCYADAYLNRGLAKSALGQK 873
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--- 556
A+ D + + +D + AY G S++GE +A + KAI+L N+ +
Sbjct: 874 AEAIADYNQAIDIDPKLAVAYNNRGNTKSALGEKTEAIADYTKAIEL--NYYNPHPYYNR 931
Query: 557 -LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
LT++ +L E A+ +V+ + + AY+ RGL LGQ +AI D
Sbjct: 932 GLTKY--NLGEQEAAIADYSKVIELSYYNAHAYYNRGLAKSDLGQKAEAIAD 981
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A RG++++ + AI+D+ +AI+ NP A+ RG A+ LGE+ EA+ D ++A+
Sbjct: 757 AYFRRGSSKSDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLGENEEALADYNQAI 816
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
AD + RG+ A+ D + + L+ AY GLA S++G+ +A
Sbjct: 817 HLNSCYADAYNNRGLAKSFLGQTEEAIADYNQALDLNSCYADAYLNRGLAKSALGQKAEA 876
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ +AI +D A+ + L +A+ + + ++ Y+ RGL +
Sbjct: 877 IADYNQAIDIDPKLAVAYNNRGNTKSALGEKTEAIADYTKAIELNYYNPHPYYNRGLTKY 936
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG+ + AI D S + + N Y R +G+ EA+
Sbjct: 937 NLGEQEAAIADYSKVIELSYYNAHAYYNRGLAKSDLGQKAEAI 979
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG ++ E A++ F+ A+ NP A+ RG + +G EA+ D ++A+ +P
Sbjct: 455 RGVGKSELAEKAEALAAFSNAVNLNPKLAVAYLLRGNIKGEIGNQEEALADYNQAIHLDP 514
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ RGIV A+ D + + L+ + +AY G+ S +G+ +A +
Sbjct: 515 KLSAAYVNRGIVKSALGHKAEALADYNQAIHLEPKFSAAYVNRGMVKSDLGQKAEAISDY 574
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI+L+ A+ + +L + +A+ Q L +D + + AY RG + LGQ
Sbjct: 575 NQAIELNPKLALAYVNRGAAKSELGHKAEAISDYNQALDLDPKLAVAYANRGSAKYELGQ 634
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI D + + +DP R + +GE EA+
Sbjct: 635 KAEAISDYNQAIDLDPKLAIAYVERGYVKYDLGEKEEAI 673
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G+ A++ ++Q ++ D +A RG + + A +DF +A N
Sbjct: 386 NRGLAKSRLGRIEEALADYNQAIELDANDADAYNNRGNVKYELGAKQEARADFVKANDLN 445
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + +RG ++ L E EA+ S A+ P A RG + + + A+ D
Sbjct: 446 PKLAFVYFKRGVGKSELAEKAEALAAFSNAVNLNPKLAVAYLLRGNIKGEIGNQEEALAD 505
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + LD + +AY G+ S++G +A + +AI L+ F A+ + DL
Sbjct: 506 YNQAIHLDPKLSAAYVNRGIVKSALGHKAEALADYNQAIHLEPKFSAAYVNRGMVKSDLG 565
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+A+ Q + ++ + + AY RG LG +AI D + L +DP R
Sbjct: 566 QKAEAISDYNQAIELNPKLALAYVNRGAAKSELGHKAEAISDYNQALDLDPKLAVAYANR 625
Query: 626 ASCYHAIGEYREAV 639
S + +G+ EA+
Sbjct: 626 GSAKYELGQKAEAI 639
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
NR +L + + D ++A++L+P L AY+ +G S+LG+KEEALS + +
Sbjct: 114 NRGLAKYKLGKIEEALSDYNQAIELNPKLASAYLNRGLTKSSLGKKEEALSDYNQ 168
>gi|434392514|ref|YP_007127461.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428264355|gb|AFZ30301.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 291
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 111/210 (52%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+++ AI+ FTE I+ +P A++ RG AR LG+ AI D ++A+ PN+A + R
Sbjct: 52 DIQGAIASFTEVIRLDPGNAAAYENRGNARDDLGDHQGAIADYNQAININPNNATTYYNR 111
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
GI + + AA+ D + + + + SAY G+ ++G+ A +AIQL+ N
Sbjct: 112 GIAYDRLGNNEAAIADYNRAIAFNPKFASAYNSRGILRFALGDELNAMADFNQAIQLEPN 171
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + + ++ A+ QVL ++ + + AY RG+ + G+H+ AI D +
Sbjct: 172 RPGFYYNRGNARRRRGDNRGAILDYTQVLQLNPKDADAYFNRGIARYNEGEHQSAIADFN 231
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I+P+ E Y RA CY AIG ++A+
Sbjct: 232 QALQINPNYAEAYYNRALCYSAIGNNQQAL 261
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 101/191 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G + AI+ ++Q + +P RG A EAAI+D+ AI N
Sbjct: 76 NRGNARDDLGDHQGAIADYNQAININPNNATTYYNRGIAYDRLGNNEAAIADYNRAIAFN 135
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG R ALG+ + A+ D ++A++ EPN + RG + D A+ D
Sbjct: 136 PKFASAYNSRGILRFALGDELNAMADFNQAIQLEPNRPGFYYNRGNARRRRGDNRGAILD 195
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ ++ AY G+A + GE++ A +A+Q++ N+ EA+ + Y +
Sbjct: 196 YTQVLQLNPKDADAYFNRGIARYNEGEHQSAIADFNQALQINPNYAEAYYNRALCYSAIG 255
Query: 566 NSEKALECLQQ 576
N+++AL+ QQ
Sbjct: 256 NNQQALQDFQQ 266
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 65/131 (49%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +G+ + D A+ + ++LD N +AY G A +G+++ A + +AI +
Sbjct: 41 YNQGVKQYSDGDIQGAIASFTEVIRLDPGNAAAYENRGNARDDLGDHQGAIADYNQAINI 100
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ N + + Y L N+E A+ + + + +F+ AY+ RG+L LG A+
Sbjct: 101 NPNNATTYYNRGIAYDRLGNNEAAIADYNRAIAFNPKFASAYNSRGILRFALGDELNAMA 160
Query: 607 DLSSGLGIDPS 617
D + + ++P+
Sbjct: 161 DFNQAIQLEPN 171
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRGI + G +A++ F+Q ++ +P P RG AR + + AI D+T+ +Q N
Sbjct: 144 SRGILRFALGDELNAMADFNQAIQLEPNRPGFYYNRGNARRRRGDNRGAILDYTQVLQLN 203
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG AR GE AI D ++AL+ PN A+ + R + + A++D
Sbjct: 204 PKDADAYFNRGIARYNEGEHQSAIADFNQALQINPNYAEAYYNRALCYSAIGNNQQALQD 263
Query: 506 LSACVKL-DKENKSAY 520
L +++ K Y
Sbjct: 264 FQQAANLYEQQQKPEY 279
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ + D +RGIA+ NEG++ SAI+ F+Q L+ +P Y EA R +
Sbjct: 197 TQVLQLNPKDADAYFNRGIARYNEGEHQSAIADFNQALQINPNYAEAYYNRALCYSAIGN 256
Query: 431 LEAAISDFTEA 441
+ A+ DF +A
Sbjct: 257 NQQALQDFQQA 267
>gi|118395715|ref|XP_001030204.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89284498|gb|EAR82541.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1108
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 121/240 (50%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++ L+ P + +A+ RG A ++ + AI D+T+A++ A+ RG
Sbjct: 583 AIELYTISLQFYPNHFKAIFNRGFALDKLKQYDLAIKDYTKALEIENGNCYAYYNRGITY 642
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ +AI+D + A+ P AD H RG K +N A++D + C++ + + +
Sbjct: 643 DRKGQYDQAIKDFTSAIALNPKKADFYHNRGFAWKKKGCYNEAIQDFTFCIEFEPNHFKS 702
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G I + ++AE+ LKA+ L + HL Y+ ++AL Q +
Sbjct: 703 FYNRGSCFEKIQDLEQAEKDFLKALSLQPKNVSCLNHLGSLYEKCGKLDEALSYYNQSIE 762
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + + +Y+ RGL+ LG ++KA++D + + ++P+N ++ R C ++ + E++
Sbjct: 763 FDPKQATSYNGRGLVHDKLGDYEKAMQDFTQAIQLEPTNPIYIHNRGCCLRSVDKLVESI 822
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 123/258 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF +RG A +G Y AI F ++ +P + ++ RG+ ++LE A DF +A
Sbjct: 667 DFYHNRGFAWKKKGCYNEAIQDFTFCIEFEPNHFKSFYNRGSCFEKIQDLEQAEKDFLKA 726
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ P G G+ EA+ ++++EF+P A + RG+V+ K D+
Sbjct: 727 LSLQPKNVSCLNHLGSLYEKCGKLDEALSYYNQSIEFDPKQATSYNGRGLVHDKLGDYEK 786
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++D + ++L+ N G L S+ + ++ + +A++LD +L Y
Sbjct: 787 AMQDFTQAIQLEPTNPIYIHNRGCCLRSVDKLVESIKDFEQALKLDPTNPIILSNLGLVY 846
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ + ++A+ C + L + + RG LG++K+AI D + L + SN
Sbjct: 847 RKMERYDEAIFCYNKELEFGGINIRTLNNRGYSFAKLGRYKEAINDYNQVLQVQGSNQHA 906
Query: 622 LYLRASCYHAIGEYREAV 639
L+ R CY +G+++ A+
Sbjct: 907 LHNRGICYERLGQFQNAI 924
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 111/256 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A +Y AI + + L+ + A RG + + + AI DFT AI
Sbjct: 602 FNRGFALDKLKQYDLAIKDYTKALEIENGNCYAYYNRGITYDRKGQYDQAIKDFTSAIAL 661
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + + RG A G EAIQD + +EFEPN + RG K +D A +
Sbjct: 662 NPKKADFYHNRGFAWKKKGCYNEAIQDFTFCIEFEPNHFKSFYNRGSCFEKIQDLEQAEK 721
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + L +N S +LG G+ +A + ++I+ D ++ + L
Sbjct: 722 DFLKALSLQPKNVSCLNHLGSLYEKCGKLDEALSYYNQSIEFDPKQATSYNGRGLVHDKL 781
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ EKA++ Q + ++ H RG L + + ++IKD L +DP+N L
Sbjct: 782 GDYEKAMQDFTQAIQLEPTNPIYIHNRGCCLRSVDKLVESIKDFEQALKLDPTNPIILSN 841
Query: 625 RASCYHAIGEYREAVI 640
Y + Y EA+
Sbjct: 842 LGLVYRKMERYDEAIF 857
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 34/245 (13%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK A+S ++Q ++ DP + GRG + E A+ DFT+AIQ P+
Sbjct: 748 GKLDEALSYYNQSIEFDPKQATSYNGRGLVHDKLGDYEKAMQDFTQAIQLEPTNPIYIHN 807
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG ++ + VE+I+D +AL+ +P + IL G+V K + ++ A+ + ++
Sbjct: 808 RGCCLRSVDKLVESIKDFEQALKLDPTNPIILSNLGLVYRKMERYDEAIFCYNKELEFGG 867
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N G + + +G YK +A+
Sbjct: 868 INIRTLNNRGYSFAKLGRYK----------------------------------EAINDY 893
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
QVL + A H RG+ LGQ + AI D S+ + +PSN + R CY +G+
Sbjct: 894 NQVLQVQGSNQHALHNRGICYERLGQFQNAINDFSAVIKSNPSNANAYFNRGCCYDNLGK 953
Query: 635 YREAV 639
A+
Sbjct: 954 MELAI 958
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
K +I F+Q LK DP P L G + AI + + ++ R
Sbjct: 817 KLVESIKDFEQALKLDPTNPIILSNLGLVYRKMERYDEAIFCYNKELEFGGINIRTLNNR 876
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + A LG EAI D ++ L+ + ++ LH RGI + F A+ D SA +K +
Sbjct: 877 GYSFAKLGRYKEAINDYNQVLQVQGSNQHALHNRGICYERLGQFQNAINDFSAVIKSNPS 936
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
N +AY G ++G+ + A + + KA+++D
Sbjct: 937 NANAYFNRGCCYDNLGKMELAIQDYSKALEID 968
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
FC + + I++ +RG + G+Y AI+ ++Q+L+ AL RG
Sbjct: 857 FCYNKELEFGGINIRTLNNRGYSFAKLGRYKEAINDYNQVLQVQGSNQHALHNRGICYER 916
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
+ + AI+DF+ I+SNPS A+ RG LG+ AIQD SKALE +
Sbjct: 917 LGQFQNAINDFSAVIKSNPSNANAYFNRGCCYDNLGKMELAIQDYSKALEID 968
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR CY +L ++ I D ++ +P+ AY +GC + LG+ E A+ + K E
Sbjct: 909 NRGICYERLGQFQNAINDFSAVIKSNPSNANAYFNRGCCYDNLGKMELAIQDYSKALE 966
>gi|334116936|ref|ZP_08491028.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
gi|333461756|gb|EGK90361.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
Length = 732
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 109/221 (49%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
RG A+A Q + AI+D+T+AI N E + +R AR +G + +AIQD ++A++
Sbjct: 346 FARGVAKAQQGDTTGAIADYTQAIALNAGDAETYYKRANARYDMGATEQAIQDYTQAIKV 405
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
P+ L+ RG+ D AVED + V+L+ + AY+ GLA +G+Y+ A E
Sbjct: 406 HPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIE 465
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ +AI+L N A+ + + A+ Q L I + + Y+ RG L
Sbjct: 466 DYTQAIRLSPNDATAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNL 525
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ A++D + + + P + R S Y + Y +A+
Sbjct: 526 ADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAI 566
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 124/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+++ G A+ F Q+++ +P EA RG A + AI D+T+AI+ +
Sbjct: 415 NRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIEDYTQAIRLS 474
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG AR+A G+ A+ D ++AL+ P A + + RG F D+ A+ED
Sbjct: 475 PNDATAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNLADYQGAMED 534
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + AYT A ++ Y KA + I+L A+ + Y +L
Sbjct: 535 YTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLAPKDEAAYNNRCIAYLNLK 594
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+KA E + ++ KAY RGL G + A++D + + ++PS+ R
Sbjct: 595 QFQKASEDCSLTIGLNGNNPKAYSNRGLARLASGDKQGAVEDFTQAIRLNPSDAVAYSNR 654
Query: 626 ASCYHAIGEYREAV 639
+ Y + Y AV
Sbjct: 655 GTIYSELKNYPLAV 668
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 126/253 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R A+ + G AI + Q +K P + +AL RG AR + A+ DFT+ ++ NP
Sbjct: 382 RANARYDMGATEQAIQDYTQAIKVHPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNP 441
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S GEA+ +RG A LG+ AI+D ++A+ PN A RG+ D A+ D
Sbjct: 442 SDGEAYSQRGLAYYDLGDYRTAIEDYTQAIRLSPNDATAYSNRGLARSAAGDKTGAMADF 501
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +++ + Y G A ++ +Y+ A E + KAI+L + +A+ + Y +LA
Sbjct: 502 TQALQISPKQAGVYYSRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLAT 561
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+KA+ + + + + AY+ R + L Q +KA +D S +G++ +N + R
Sbjct: 562 YDKAIADCTEGIRLAPKDEAAYNNRCIAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRG 621
Query: 627 SCYHAIGEYREAV 639
A G+ + AV
Sbjct: 622 LARLASGDKQGAV 634
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G A++ F Q L+ P RG AR + + A+ D+T+AI+
Sbjct: 483 NRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNLADYQGAMEDYTKAIELQ 542
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ R A L +AI D ++ + P + R I K F A ED
Sbjct: 543 PDLADAYTNRCSAYLNLATYDKAIADCTEGIRLAPKDEAAYNNRCIAYLNLKQFQKASED 602
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ N AY+ GLA + G+ + A E +AI+L+ + A+ + Y +L
Sbjct: 603 CSLTIGLNGNNPKAYSNRGLARLASGDKQGAVEDFTQAIRLNPSDAVAYSNRGTIYSELK 662
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N A+E L ++ + + A++ RGL+ L AI+D
Sbjct: 663 NYPLAVEDFAHSLRLNPKNASAFYSRGLVRRQLKDRAGAIEDF 705
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P+A RG AR + + A+ DFT+AI+ NPS A+ RG + L A++D +
Sbjct: 614 PKAYSNRGLARLASGDKQGAVEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAH 673
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+L P +A + RG+V + KD A+ED L
Sbjct: 674 SLRLNPKNASAFYSRGLVRRQLKDRAGAIEDFQKAATL 711
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 37/201 (18%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A+ N Y A+ + + ++ P +A R +A + AI+D TE I+
Sbjct: 517 SRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLA 576
Query: 446 P----------------------------------SAGEAWKRRGQARAALGESVEAIQD 471
P + +A+ RG AR A G+ A++D
Sbjct: 577 PKDEAAYNNRCIAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRGLARLASGDKQGAVED 636
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
++A+ P+ A RG + + K++ AVED + ++L+ +N SA+ GL +
Sbjct: 637 FTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAHSLRLNPKNASAFYSRGLVRRQLK 696
Query: 532 EYKKAEEAHLKAIQLDRNFLE 552
+ A E KA L FLE
Sbjct: 697 DRAGAIEDFQKAATL---FLE 714
>gi|428305620|ref|YP_007142445.1| hypothetical protein Cri9333_2057 [Crinalium epipsammum PCC 9333]
gi|428247155|gb|AFZ12935.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 343
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 116/227 (51%), Gaps = 4/227 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G + AI+ + ++ DP Y I RG A A Q + A++D+T A+ +
Sbjct: 93 NRGLARRQLGDFTGAIADYTNSIRIDPSYISPYINRGIAYAAQGKYTEAMADYTAAVNLD 152
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ R A ALG+ AI+D ++ + +P RGI D+ +A+ D
Sbjct: 153 AKDAAAYFNRAIAYDALGDRAAAIKDYTQTISLQPKYITAYLNRGISRTDSGDYKSAIAD 212
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
+ +KLD + + Y G+A +G+ K A + +AIQL N A+ + L + Q
Sbjct: 213 FNTVLKLDPQLVAGYENRGIARRFLGDLKGAIADYNRAIQLSPNNASAYYNRGLVSYRQ- 271
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
N + A++ Q + +D RF++AY RGLL + LG + A+ D+ +
Sbjct: 272 -GNKQAAIDDYTQAIRVDSRFARAYGNRGLLRYELGSREAALDDVRT 317
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 13/241 (5%)
Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
Q+ K D L RG ++ + AI+D T AI+ + + EA+ RG AR LG+
Sbjct: 51 QVTKTD------LFNRGVSKYSNADYNGAIADLTAAIRLDSTLAEAYYNRGLARRQLGDF 104
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
AI D + ++ +P+ RGI + A+ D +A V LD ++ +AY +
Sbjct: 105 TGAIADYTNSIRIDPSYISPYINRGIAYAAQGKYTEAMADYTAAVNLDAKDAAAYFNRAI 164
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
A ++G+ A + + + I L ++ A+ + D + + A+ VL +D +
Sbjct: 165 AYDALGDRAAAIKDYTQTISLQPKYITAYLNRGISRTDSGDYKSAIADFNTVLKLDPQLV 224
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH-------AIGEYREA 638
Y RG+ LG K AI D + + + P+N Y R + AI +Y +A
Sbjct: 225 AGYENRGIARRFLGDLKGAIADYNRAIQLSPNNASAYYNRGLVSYRQGNKQAAIDDYTQA 284
Query: 639 V 639
+
Sbjct: 285 I 285
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 85/188 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RGIA +GKY A++ + + D A R A + AAI D+T+ I
Sbjct: 126 INRGIAYAAQGKYTEAMADYTAAVNLDAKDAAAYFNRAIAYDALGDRAAAIKDYTQTISL 185
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A+ RG +R G+ AI D + L+ +P RGI D A+
Sbjct: 186 QPKYITAYLNRGISRTDSGDYKSAIADFNTVLKLDPQLVAGYENRGIARRFLGDLKGAIA 245
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L N SAY GL G + A + + +AI++D F A+G+ +L
Sbjct: 246 DYNRAIQLSPNNASAYYNRGLVSYRQGNKQAAIDDYTQAIRVDSRFARAYGNRGLLRYEL 305
Query: 565 ANSEKALE 572
+ E AL+
Sbjct: 306 GSREAALD 313
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 68/128 (53%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RGI++ + G Y SAI+ F+ +LK DP RG AR F +L+ AI+D+ AIQ
Sbjct: 194 LNRGISRTDSGDYKSAIADFNTVLKLDPQLVAGYENRGIARRFLGDLKGAIADYNRAIQL 253
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG G AI D ++A+ + A RG++ ++ AA++
Sbjct: 254 SPNNASAYYNRGLVSYRQGNKQAAIDDYTQAIRVDSRFARAYGNRGLLRYELGSREAALD 313
Query: 505 DLSACVKL 512
D+ +L
Sbjct: 314 DVRTAARL 321
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ + + AIR LDS LA++Y NR QL I D ++++DP+ + YI
Sbjct: 73 AIADLTAAIR-LDSTLAEAY-----YNRGLARRQLGDFTGAIADYTNSIRIDPSYISPYI 126
Query: 108 LKGCAFSALGRKEEALS 124
+G A++A G+ EA++
Sbjct: 127 NRGIAYAAQGKYTEAMA 143
>gi|428310718|ref|YP_007121695.1| hypothetical protein Mic7113_2488 [Microcoleus sp. PCC 7113]
gi|428252330|gb|AFZ18289.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 548
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 134/258 (51%), Gaps = 1/258 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF L++GI ++ +Y AI F Q ++ + Y +A + RG R + + AI+D+T+
Sbjct: 146 DF-LNQGIEKLQNEQYKEAIEDFTQAIEINSQYADAYLLRGCTRIEIDDYQGAIADYTQT 204
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ P + + RG+ AL + AI D +++++ P A+ + RG ++ +
Sbjct: 205 IQLLPDDSDIYFMRGKGYIALDDYKSAIADFTQSIKINPQYAEAYYLRGCIHSDIGNHQE 264
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + +++D AY G L++ +YK+A + ++I+LD + + + + Y
Sbjct: 265 AIADYTQTIQIDPSYVDAYRNRGHLLAAQEDYKEAISDYSESIRLDPSDADIYFRRGKAY 324
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
L N + A+ QV+ ID ++S AY +RG L L ++ AI D + + +P++ +
Sbjct: 325 IALENYKSAIGDYTQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADFTEVIKTNPNHADA 384
Query: 622 LYLRASCYHAIGEYREAV 639
+ R AI +Y+ A+
Sbjct: 385 YFQRGQARIAIKDYKGAI 402
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG A + Y SAI + Q++K D Y +A RG A + + AI+DFTE
Sbjct: 315 DIYFRRGKAYIALENYKSAIGDYTQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADFTEV 374
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I++NP+ +A+ +RGQAR A+ + AIQD ++ ++ PN RG KD+N
Sbjct: 375 IKTNPNHADAYFQRGQARIAIKDYKGAIQDFTEVIKINPNEVAPYLNRGDACTAIKDYNG 434
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
AV D S ++++ Y G A S G+ + A + +AI+LD ++ A+
Sbjct: 435 AVADYSQVIQMEPNCADTYFKRGCARSEKGDRQGAIADYDQAIKLDPDYAYAY 487
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 9/266 (3%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG + Y SAI+ F Q +K +P Y EA RG + + AI+D+T+
Sbjct: 213 DIYFMRGKGYIALDDYKSAIADFTQSIKINPQYAEAYYLRGCIHSDIGNHQEAIADYTQT 272
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ +PS +A++ RG AA + EAI D S+++ +P+ ADI RG +++ +
Sbjct: 273 IQIDPSYVDAYRNRGHLLAAQEDYKEAISDYSESIRLDPSDADIYFRRGKAYIALENYKS 332
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + +K+D + AY G + + +Y+ A + I+ + N +A+ Q
Sbjct: 333 AIGDYTQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADFTEVIKTNPNHADAYFQRGQAR 392
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ + + A++ +V+ I+ Y RG + + A+ D S + ++P N
Sbjct: 393 IAIKDYKGAIQDFTEVIKINPNEVAPYLNRGDACTAIKDYNGAVADYSQVIQMEP-NCAD 451
Query: 622 LYLRASCYH--------AIGEYREAV 639
Y + C AI +Y +A+
Sbjct: 452 TYFKRGCARSEKGDRQGAIADYDQAI 477
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 122/258 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L RG ++ Y AI+ + Q ++ P + RG + ++AI+DFT++
Sbjct: 179 DAYLLRGCTRIEIDDYQGAIADYTQTIQLLPDDSDIYFMRGKGYIALDDYKSAIADFTQS 238
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP EA+ RG + +G EAI D ++ ++ +P+ D RG + +D+
Sbjct: 239 IKINPQYAEAYYLRGCIHSDIGNHQEAIADYTQTIQIDPSYVDAYRNRGHLLAAQEDYKE 298
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D S ++LD + Y G A ++ YK A + + I++D + +A+
Sbjct: 299 AISDYSESIRLDPSDADIYFRRGKAYIALENYKSAIGDYTQVIKIDSKYSDAYFIRGCLC 358
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+L + + A+ +V+ + + AY RG + +K AI+D + + I+P+ +
Sbjct: 359 AELEDYQGAIADFTEVIKTNPNHADAYFQRGQARIAIKDYKGAIQDFTEVIKINPNEVAP 418
Query: 622 LYLRASCYHAIGEYREAV 639
R AI +Y AV
Sbjct: 419 YLNRGDACTAIKDYNGAV 436
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 120/253 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + G + AI+ + Q ++ DP Y +A RG A Q + + AISD++E+I+ +P
Sbjct: 252 RGCIHSDIGNHQEAIADYTQTIQIDPSYVDAYRNRGHLLAAQEDYKEAISDYSESIRLDP 311
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S + + RRG+A AL AI D ++ ++ + +D RG + + +D+ A+ D
Sbjct: 312 SDADIYFRRGKAYIALENYKSAIGDYTQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADF 371
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K + + AY G A +I +YK A + + I+++ N + + + + +
Sbjct: 372 TEVIKTNPNHADAYFQRGQARIAIKDYKGAIQDFTEVIKINPNEVAPYLNRGDACTAIKD 431
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
A+ QV+ ++ + Y RG G + AI D + +DP RA
Sbjct: 432 YNGAVADYSQVIQMEPNCADTYFKRGCARSEKGDRQGAIADYDQAIKLDPDYAYAYVKRA 491
Query: 627 SCYHAIGEYREAV 639
G+ +EA+
Sbjct: 492 YVRKEKGKKQEAI 504
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ K S D RG Y AI+ F +++K +P + +A RG AR ++
Sbjct: 338 TQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADFTEVIKTNPNHADAYFQRGQARIAIKD 397
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI DFTE I+ NP+ + RG A A+ + A+ D S+ ++ EPN AD +RG
Sbjct: 398 YKGAIQDFTEVIKINPNEVAPYLNRGDACTAIKDYNGAVADYSQVIQMEPNCADTYFKRG 457
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ D A+ D +KLD + AY G+ ++A KAI L
Sbjct: 458 CARSEKGDRQGAIADYDQAIKLDPDYAYAYVKRAYVRKEKGKKQEAIADFQKAISL 513
>gi|384215071|ref|YP_005606236.1| hypothetical protein BJ6T_13600 [Bradyrhizobium japonicum USDA 6]
gi|354953969|dbj|BAL06648.1| hypothetical protein BJ6T_13600 [Bradyrhizobium japonicum USDA 6]
Length = 461
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 110/227 (48%), Gaps = 5/227 (2%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP EA RG QR L+ A++D+ +AI+ P +AW RG G++ +AI+
Sbjct: 137 DPQDAEAYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVNYYLGGDNEKAIR 196
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
DLS+AL +PN RG K + AV D ++LD + Y GL L+++
Sbjct: 197 DLSEALRLDPNRPRAYTNRGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLVLAAM 256
Query: 531 GEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
GEY KA + +A++L NF G Q +L AL + L ID F++ Y
Sbjct: 257 GEYDKAIADYDQALRLAPRPNFFTNRGDSHQLKGELG---AALSDYEAALKIDPNFAQTY 313
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ R +L +G+ KKA+ D + L +DP N R S I ++
Sbjct: 314 NNRAVLYKKMGERKKALADYETALKLDPGNENAANGRRSMVAEIAKF 360
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 34/243 (13%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQA-RAALGESVEAIQDLSKALEFEPNSADILHER 489
L A+ D AI N +AW+ RG R A G+ A DLSKA+E +P A+ R
Sbjct: 88 LTQALRDIDRAIALNGRNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQDAEAYELR 147
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+V + + A+ D +KL ++ A++ G+ G+ +KA +A++LD N
Sbjct: 148 GVVYTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVNYYLGGDNEKAIRDLSEALRLDPN 207
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + Y+ L +KA+ + + +D + + Y RGL+L +G++ KAI D
Sbjct: 208 RPRAYTNRGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLVLAAMGEYDKAIADYD 267
Query: 610 ---------------------------------SGLGIDPSNIECLYLRASCYHAIGEYR 636
+ L IDP+ + RA Y +GE +
Sbjct: 268 QALRLAPRPNFFTNRGDSHQLKGELGAALSDYEAALKIDPNFAQTYNNRAVLYKKMGERK 327
Query: 637 EAV 639
+A+
Sbjct: 328 KAL 330
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
G +A++D+ +A+ +A RG ++ D N A DLS ++LD ++ AY
Sbjct: 86 GGLTQALRDIDRAIALNGRNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQDAEAYE 145
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G+ ++ +A + +AI+L + +AW Y ++EKA+ L + L +D
Sbjct: 146 LRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVNYYLGGDNEKAIRDLSEALRLD 205
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AY RG LGQ KA+ D + +DP E R A+GEY +A+
Sbjct: 206 PNRPRAYTNRGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLVLAAMGEYDKAI 263
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G+Y AI+ +DQ L+ P P RG + + EL AA+SD+ A++ +
Sbjct: 248 NRGLVLAAMGEYDKAIADYDQALRLAPR-PNFFTNRGDSHQLKGELGAALSDYEAALKID 306
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
P+ + + R +GE +A+ D AL+ +P + + + R + + F A
Sbjct: 307 PNFAQTYNNRAVLYKKMGERKKALADYETALKLDPGNENAANGRRSMVAEIAKFGA 362
>gi|390438475|ref|ZP_10226939.1| putative Calcium/calmodulin-dependent protein kinase [Microcystis
sp. T1-4]
gi|389838101|emb|CCI31063.1| putative Calcium/calmodulin-dependent protein kinase [Microcystis
sp. T1-4]
Length = 639
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 120/221 (54%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + N G AI F+Q ++ +P Y A RG+A++ + AI+D+ +AI+ NP
Sbjct: 389 GVDKYNLGDNQGAIKDFNQAIQINPDYANAYYDRGSAKSNLGDKLGAIADYNQAIKLNPD 448
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ RG A+ LG + AI D ++A++ +P+ A+ RG+ + D A++D +
Sbjct: 449 DADAYISRGLAKYNLGHNQGAIADYNQAIKLKPDYANTYFWRGVAKSQLGDKQGAIKDYN 508
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+KL+ ++ Y G A ++G+ + A + + +AI+L+ +F + + +L +
Sbjct: 509 QAIKLNPDDADVYNNRGWAKYNLGDKQGAIKDYNQAIKLNPDFAFPYNNRGWAKYNLGDK 568
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A+ Q + ++ F+ Y+ RGL+ L ++KAIKD
Sbjct: 569 QGAIADYNQAIKLNPDFAVPYYNRGLIYKELNDNEKAIKDF 609
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 107/208 (51%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI DF +AIQ NP A+ RG A++ LG+ + AI D ++A++ P+ AD RG+
Sbjct: 399 QGAIKDFNQAIQINPDYANAYYDRGSAKSNLGDKLGAIADYNQAIKLNPDDADAYISRGL 458
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A+ D + +KL + + Y + G+A S +G+ + A + + +AI+L+ +
Sbjct: 459 AKYNLGHNQGAIADYNQAIKLKPDYANTYFWRGVAKSQLGDKQGAIKDYNQAIKLNPDDA 518
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + + +L + + A++ Q + ++ F+ Y+ RG + LG + AI D +
Sbjct: 519 DVYNNRGWAKYNLGDKQGAIKDYNQAIKLNPDFAFPYNNRGWAKYNLGDKQGAIADYNQA 578
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++P Y R Y + + +A+
Sbjct: 579 IKLNPDFAVPYYNRGLIYKELNDNEKAI 606
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 105/190 (55%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A+ N G AI+ ++Q +K +P +A I RG A+ + AI+D+ +AI+ P
Sbjct: 422 RGSAKSNLGDKLGAIADYNQAIKLNPDDADAYISRGLAKYNLGHNQGAIADYNQAIKLKP 481
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A++ LG+ AI+D ++A++ P+ AD+ + RG + D A++D
Sbjct: 482 DYANTYFWRGVAKSQLGDKQGAIKDYNQAIKLNPDDADVYNNRGWAKYNLGDKQGAIKDY 541
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KL+ + Y G A ++G+ + A + +AI+L+ +F + + Y++L +
Sbjct: 542 NQAIKLNPDFAFPYNNRGWAKYNLGDKQGAIADYNQAIKLNPDFAVPYYNRGLIYKELND 601
Query: 567 SEKALECLQQ 576
+EKA++ +Q
Sbjct: 602 NEKAIKDFRQ 611
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +SRG+A+ N G AI+ ++Q +K P Y RG A++ + + AI D+ +A
Sbjct: 451 DAYISRGLAKYNLGHNQGAIADYNQAIKLKPDYANTYFWRGVAKSQLGDKQGAIKDYNQA 510
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP + + RG A+ LG+ AI+D ++A++ P+ A + RG + D
Sbjct: 511 IKLNPDDADVYNNRGWAKYNLGDKQGAIKDYNQAIKLNPDFAFPYNNRGWAKYNLGDKQG 570
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
A+ D + +KL+ + Y GL + + +KA + +A QL R
Sbjct: 571 AIADYNQAIKLNPDFAVPYYNRGLIYKELNDNEKAIKDFRQASQLHR 617
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ G AI ++Q +K +P + RG A+ + + AI D+ +AI+ NP
Sbjct: 490 RGVAKSQLGDKQGAIKDYNQAIKLNPDDADVYNNRGWAKYNLGDKQGAIKDYNQAIKLNP 549
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A+ LG+ AI D ++A++ P+ A + RG++ + D A++D
Sbjct: 550 DFAFPYNNRGWAKYNLGDKQGAIADYNQAIKLNPDFAVPYYNRGLIYKELNDNEKAIKDF 609
Query: 507 SACVKLDKENKSAYTY 522
+L ++ + Y
Sbjct: 610 RQASQLHRQQNNQTWY 625
>gi|428210888|ref|YP_007084032.1| hypothetical protein Oscil6304_0361 [Oscillatoria acuminata PCC
6304]
gi|427999269|gb|AFY80112.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
Length = 362
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 1/258 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF L+ G+ ++ Y AI+ F + ++ DP +A RG AR + A+ DFTE
Sbjct: 41 DF-LTEGVQKLEAEDYEGAIADFTRAIELDPTLVDAYTARGIARHRSEDYVGAVEDFTEV 99
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P + + R L E AI DL++ +E P+ AD R + +F
Sbjct: 100 LEIQPENSQVYGLRALDYLYLREYQAAIADLNRVIEENPDDADAYMLRAEAQTELGEFQP 159
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++L +N + Y G + + G+Y + E + I LD N A+ Y
Sbjct: 160 AIRDYNRAIELSPDNPTFYRRRGQSRARSGDYPGSIEDFNRVIDLDANDALAYVFRGNAY 219
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
D+ SE AL ++ L +D ++AY+ RG+ L ++ AI D + + I+P++
Sbjct: 220 DDIGESEAALADYEKALELDPTLAQAYYNRGITRRRLEDYQGAIADYTKAIKINPTDANS 279
Query: 622 LYLRASCYHAIGEYREAV 639
L R Y + E+ +A+
Sbjct: 280 LLNRGVVYALLEEFPDAI 297
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ R+ + D + R AQ G++ AI +++ ++ P P RG +RA
Sbjct: 130 LNRVIEENPDDADAYMLRAEAQTELGEFQPAIRDYNRAIELSPDNPTFYRRRGQSRARSG 189
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ +I DF I + + A+ RG A +GES A+ D KALE +P A + R
Sbjct: 190 DYPGSIEDFNRVIDLDANDALAYVFRGNAYDDIGESEAALADYEKALELDPTLAQAYYNR 249
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
GI + +D+ A+ D + +K++ + ++ G+ + + E+ A + +AI+ + N
Sbjct: 250 GITRRRLEDYQGAIADYTKAIKINPTDANSLLNRGVVYALLEEFPDAIADYTQAIRFNPN 309
Query: 550 FLEAWGHLTQFYQDLANSEKA 570
EA+ + YQ + +++ A
Sbjct: 310 LGEAYYNRGLTYQQMGDAQSA 330
>gi|384208241|ref|YP_005593961.1| hypothetical protein Bint_0752 [Brachyspira intermedia PWS/A]
gi|343385891|gb|AEM21381.1| hypothetical protein Bint_0752 [Brachyspira intermedia PWS/A]
Length = 617
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 137/258 (53%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A+ + G + AI ++++++ D +A RG ++ + + + A+ DF +
Sbjct: 194 DAYYNRGVAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGASKNYLQLFDEAMKDFNKI 253
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P+ A+ RG ++ LG EAI+D +KAL+ PN AD + RG + F
Sbjct: 254 LELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKALKINPNFADAYYNRGNSKKELGLFKE 313
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ED + +K + ++Y G + Y++A + + K I+LD N+++A+ +
Sbjct: 314 AIEDYNNAIKWKPNDINSYMNRGNVKYDLELYEEAIKDYDKIIKLDHNYVDAYYNRANAK 373
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
++L +++++ + +Y++ +S AY+ RGL LG +++AIKD + + N E
Sbjct: 374 RELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEA 433
Query: 622 LYLRASCYHAIGEYREAV 639
Y S + + +E++
Sbjct: 434 YYNIGSAKYDLDLLKESI 451
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 142/294 (48%), Gaps = 34/294 (11%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D +RG ++ + A+ F++IL+ +P A RG ++ + AI D+
Sbjct: 226 NIDAYNNRGASKNYLQLFDEAMKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYN 285
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A++ NP+ +A+ RG ++ LG EAI+D + A++++PN + RG V + + +
Sbjct: 286 KALKINPNFADAYYNRGNSKKELGLFKEAIEDYNNAIKWKPNDINSYMNRGNVKYDLELY 345
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++D +KLD AY A +G YK++ + + KAI L+ N+ +A+ +
Sbjct: 346 EEAIKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGL 405
Query: 560 FYQDLANSEKALECLQQ----------------------------VLYIDK------RFS 585
DL E+A++ ++ + Y DK +S
Sbjct: 406 AKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYS 465
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AY+ RGL + LG +K+AIKD + ++P++ R + +G Y+EA+
Sbjct: 466 EAYNNRGLSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYTLGLYKEAI 519
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 14/245 (5%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD +R A+ G Y +I +D+ + +P Y +A RG A++ E AI D+ E
Sbjct: 363 VDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEE 422
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
+I EA+ G A+ L E+I+ KA+E P ++ + RG+ +
Sbjct: 423 SIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYK 482
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH---- 556
A++D ++L+ + + Y GL ++G YK+A + + KAI+L N+ A+G+
Sbjct: 483 EAIKDYDKSIELNPNDSNTYNNRGLTKYTLGLYKEAIKDYTKAIELTPNYTNAYGNRGSA 542
Query: 557 ---LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
L Q+ + + + +KA+E Y+ Y+ RG + G +K+A+KD L
Sbjct: 543 KDELGQYKEAIKDYDKAIELEPNTAYL-------YNDRGWVKKNAGLYKEALKDYKKALE 595
Query: 614 IDPSN 618
+DP+N
Sbjct: 596 LDPNN 600
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 133/274 (48%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +K+ I+ +F +RG ++ G + AI ++ +K P + + RG +
Sbjct: 280 AIEDYNKALKINPNFADAYYNRGNSKKELGLFKEAIEDYNNAIKWKPNDINSYMNRGNVK 339
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI D+ + I+ + + +A+ R A+ LG E+I+D KA+ PN +D
Sbjct: 340 YDLELYEEAIKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDA 399
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ + A++D + L +N AY +G A + K++ + + KAI+
Sbjct: 400 YNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIE 459
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L + EA+ + DL ++A++ + + ++ S Y+ RGL + LG +K+AI
Sbjct: 460 LRPTYSEAYNNRGLSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYTLGLYKEAI 519
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
KD + + + P+ R S +G+Y+EA+
Sbjct: 520 KDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAI 553
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 135/270 (50%), Gaps = 10/270 (3%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL--- 431
K K ++ ++RG + + Y AI +D+I+K D Y +A R A+ REL
Sbjct: 323 KWKPNDINSYMNRGNVKYDLELYEEAIKDYDKIIKLDHNYVDAYYNRANAK---RELGLY 379
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ +I D+ +AI NP+ +A+ RG A++ LG EAI+D ++++ ++ + + G
Sbjct: 380 KESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGS 439
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ +++ ++L AY GL+ + +G YK+A + + K+I+L+ N
Sbjct: 440 AKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEAIKDYDKSIELNPNDS 499
Query: 552 EAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + LT++ L ++A++ + + + ++ AY RG LGQ+K+AIKD
Sbjct: 500 NTYNNRGLTKY--TLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYD 557
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++P+ R G Y+EA+
Sbjct: 558 KAIELEPNTAYLYNDRGWVKKNAGLYKEAL 587
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 74/134 (55%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ + G Y AI +D+ ++ +P RG + + AI D+T+AI+
Sbjct: 470 NRGLSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYTLGLYKEAIKDYTKAIELT 529
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A+ LG+ EAI+D KA+E EPN+A + ++RG V + A++D
Sbjct: 530 PNYTNAYGNRGSAKDELGQYKEAIKDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKD 589
Query: 506 LSACVKLDKENKSA 519
++LD NK A
Sbjct: 590 YKKALELDPNNKYA 603
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 52 WSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
+ +AI+ D ++ + D NRA +L L+K I+D DKA+ L+P AY +G
Sbjct: 345 YEEAIKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRG 404
Query: 111 CAFSALGRKEEALSVWEKGYEHALHQSAD 139
A S LG EEA+ K YE ++ AD
Sbjct: 405 LAKSDLGMYEEAI----KDYEESIDLCAD 429
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR L L+K I+D KA++L P AY +G A LG+ +EA+ ++K E
Sbjct: 504 NRGLTKYTLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYDKAIE 561
>gi|428312973|ref|YP_007123950.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
gi|428254585|gb|AFZ20544.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
Length = 738
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 120/244 (49%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A++ +++ ++ P Y A G+G + E A + + +AIQ P EAW R
Sbjct: 382 RYDDALASYNRAVELKPEYAAAWNGKGNTLLALKRYEEARNAYDKAIQIQPDYAEAWIGR 441
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A +L + EAI +ALEF+ +S + + +G V K + ++ A+ ++L
Sbjct: 442 GNALDSLQQYKEAINSFDRALEFKSDSLEAWNNKGNVQIKLQKYSDAIASFDKAIELQPN 501
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ + G AL ++ +Y++A +++ KA++ +F AW +L ++A+E
Sbjct: 502 YAPTWNHRGWALHNLRQYEEAVKSYNKAVEYQPDFPNAWYQRGNALINLQKYQEAVESYD 561
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + F KA++ RG L L Q+++A + +P + E Y R H + Y
Sbjct: 562 KAVQFQPNFYKAWYSRGSALLNLRQYEQAFASFDQAVKFNPDDSEAWYNRGWSLHQLQRY 621
Query: 636 REAV 639
+EAV
Sbjct: 622 QEAV 625
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 123/245 (50%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A + +D+ ++ P Y EA IGRG A ++ + AI+ F A++ + EAW +
Sbjct: 416 RYEEARNAYDKAIQIQPDYAEAWIGRGNALDSLQQYKEAINSFDRALEFKSDSLEAWNNK 475
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + L + +AI KA+E +PN A + RG + + AV+ + V+ +
Sbjct: 476 GNVQIKLQKYSDAIASFDKAIELQPNYAPTWNHRGWALHNLRQYEEAVKSYNKAVEYQPD 535
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+A+ G AL ++ +Y++A E++ KA+Q NF +AW +L E+A
Sbjct: 536 FPNAWYQRGNALINLQKYQEAVESYDKAVQFQPNFYKAWYSRGSALLNLRQYEQAFASFD 595
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
Q + + S+A++ RG LH L ++++A+ + + + + Y + ++ + Y
Sbjct: 596 QAVKFNPDDSEAWYNRGWSLHQLQRYQEAVASYNKAIQLRKKFYQAQYNLGNVFYKLKRY 655
Query: 636 REAVI 640
++A +
Sbjct: 656 QDAFV 660
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 115/240 (47%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
KS S++ ++G Q+ KY+ AI+ FD+ ++ P Y RG A R+ E A+
Sbjct: 465 KSDSLEAWNNKGNVQIKLQKYSDAIASFDKAIELQPNYAPTWNHRGWALHNLRQYEEAVK 524
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ +A++ P AW +RG A L + EA++ KA++F+PN + RG
Sbjct: 525 SYNKAVEYQPDFPNAWYQRGNALINLQKYQEAVESYDKAVQFQPNFYKAWYSRGSALLNL 584
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ + A VK + ++ A+ G +L + Y++A ++ KAIQL + F +A +
Sbjct: 585 RQYEQAFASFDQAVKFNPDDSEAWYNRGWSLHQLQRYQEAVASYNKAIQLRKKFYQAQYN 644
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
L + L + A +VL I +A++ RG L L +++ AI + L P
Sbjct: 645 LGNVFYKLKRYQDAFVSYNKVLEIQPNHYEAWYSRGNALVNLKRYQDAIDSYNKALQYKP 704
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 3/188 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V +K+ DF RG A +N KY A+ +D+ ++ P + +A RG+A
Sbjct: 522 AVKSYNKAVEYQPDFPNAWYQRGNALINLQKYQEAVESYDKAVQFQPNFYKAWYSRGSAL 581
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
R+ E A + F +A++ NP EAW RG + L EA+ +KA++
Sbjct: 582 LNLRQYEQAFASFDQAVKFNPDDSEAWYNRGWSLHQLQRYQEAVASYNKAIQLRKKFYQA 641
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ G V +K K + A + +++ + A+ G AL ++ Y+ A +++ KA+Q
Sbjct: 642 QYNLGNVFYKLKRYQDAFVSYNKVLEIQPNHYEAWYSRGNALVNLKRYQDAIDSYNKALQ 701
Query: 546 LDRNFLEA 553
++ A
Sbjct: 702 YKPDYQAA 709
>gi|374299783|ref|YP_005051422.1| hypothetical protein [Desulfovibrio africanus str. Walvis Bay]
gi|332552719|gb|EGJ49763.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
africanus str. Walvis Bay]
Length = 395
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 113/219 (51%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A A+ RE +I DF +I NP + + RG + +GES +AI D +KA+ +P
Sbjct: 65 RGLAYAYAREYYKSIVDFDMSIIINPYSSLVYSDRGNSYFEIGESEQAIADWNKAILLDP 124
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ G ++ K++ A+E + +K + + AY GLA ++GEY KA +
Sbjct: 125 GNPHPYVSMGYDHYLKKEYVQAIEFFNTAIKYNPKYALAYNNRGLAYHALGEYIKAIADY 184
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI +D A+ + Y + ++AL + + I+ R + Y+ RGL +GQ
Sbjct: 185 NEAILIDPMLAWAYNNRGGTYSKIEKYQQALSDYNKAIKINPRLGRTYNNRGLTHARMGQ 244
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
H++A+ D S + ++ N E Y R Y+ +G +++A+
Sbjct: 245 HQQALTDFSKAVELESDNSEVYYNRGLTYNILGNHQKAI 283
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + G+ AI+ +++ + DP P + G ++E AI F AI+ NP
Sbjct: 99 RGNSYFEIGESEQAIADWNKAILLDPGNPHPYVSMGYDHYLKKEYVQAIEFFNTAIKYNP 158
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG A ALGE ++AI D ++A+ +P A + RG K + + A+ D
Sbjct: 159 KYALAYNNRGLAYHALGEYIKAIADYNEAILIDPMLAWAYNNRGGTYSKIEKYQQALSDY 218
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ Y GL + +G++++A KA++L+ + E + + Y L N
Sbjct: 219 NKAIKINPRLGRTYNNRGLTHARMGQHQQALTDFSKAVELESDNSEVYYNRGLTYNILGN 278
Query: 567 SEKALECLQQVLYIDKRFSKAYH 589
+KA++ + ID + SKA++
Sbjct: 279 HQKAIQDYIMAIRIDPKLSKAHN 301
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S G + +Y AI F+ +K +P Y A RG A E AI+D+ EAI
Sbjct: 131 VSMGYDHYLKKEYVQAIEFFNTAIKYNPKYALAYNNRGLAYHALGEYIKAIADYNEAILI 190
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG + + + +A+ D +KA++ P + RG+ + + A+
Sbjct: 191 DPMLAWAYNNRGGTYSKIEKYQQALSDYNKAIKINPRLGRTYNNRGLTHARMGQHQQALT 250
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY--- 561
D S V+L+ +N Y GL + +G ++KA + ++ AI++D +A +L Y
Sbjct: 251 DFSKAVELESDNSEVYYNRGLTYNILGNHQKAIQDYIMAIRIDPKLSKAHNNLAFTYATA 310
Query: 562 --QDLANSEKAL 571
L N E+AL
Sbjct: 311 NPPQLRNMEEAL 322
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++++AI ++D +LA +Y NR YS++E ++ + D +KA++++P L + Y
Sbjct: 180 AIADYNEAI-LIDPMLAWAYN-----NRGGTYSKIEKYQQALSDYNKAIKINPRLGRTYN 233
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G + +G+ ++AL+ + K E
Sbjct: 234 NRGLTHARMGQHQQALTDFSKAVE 257
>gi|434389920|ref|YP_007100354.1| hypothetical protein Cha6605_6437 [Chamaesiphon minutus PCC 6605]
gi|428021916|gb|AFY97252.1| hypothetical protein Cha6605_6437 [Chamaesiphon minutus PCC 6605]
Length = 1126
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 127/255 (49%), Gaps = 4/255 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI N G++ A+S F++ ++ +P + +A RG + + E A+S+F A++ P
Sbjct: 165 QGIELDNLGRFEDAVSNFNRAIEIEPNFYQAWFKRGFSLGNLNKFEEAVSNFNRAVEIEP 224
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +W RG A +G +AI +A+E + + +I +RG + A+
Sbjct: 225 NHSPSWHCRGLALGQIGRYEDAIYSFERAIEIDSDEPEIWRDRGFAQINLDRYEEAIFSY 284
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDL 564
+ + + + + G+ L I +Y++AE + +AIQ++ +F EAW L F+ L
Sbjct: 285 ERYLNIQINDCNIWFLRGVLLKYIDKYEEAETSLDRAIQINPDFFEAWCERGLVCFF--L 342
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
A ++ ++ + + ++ +A+ +GL L +GQ+K AI + I P E
Sbjct: 343 ARNQDSIASYDRAIELNADLHEAWFGKGLTLKTIGQYKNAIASYDRAIEIKPDYYEAWSN 402
Query: 625 RASCYHAIGEYREAV 639
R S AI +Y+EA+
Sbjct: 403 RGSALEAISKYKEAI 417
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 125/261 (47%), Gaps = 14/261 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A G+Y AI F++ ++ D PE RG A+ E AI + +
Sbjct: 233 RGLALGQIGRYEDAIYSFERAIEIDSDEPEIWRDRGFAQINLDRYEEAIFSYERYLNIQI 292
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W RG + + EA L +A++ P+ + ERG+V F ++
Sbjct: 293 NDCNIWFLRGVLLKYIDKYEEAETSLDRAIQINPDFFEAWCERGLVCFFLARNQDSIASY 352
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQ 559
++L+ + A+ GL L +IG+YK A ++ +AI++ ++ EAW + +++
Sbjct: 353 DRAIELNADLHEAWFGKGLTLKTIGQYKNAIASYDRAIEIKPDYYEAWSNRGSALEAISK 412
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ + +AN ++A+E I+ F ++ RG+ L LGQ+ +AI + + + P +
Sbjct: 413 YKEAIANYDRAIE-------INPDFHLVWYNRGISLEHLGQYSEAIPNFERAIKLKPDDY 465
Query: 620 ECLYLRASCYHAIGEYREAVI 640
+ L+ +G Y+EA+I
Sbjct: 466 QSLFRLGVALDNLGWYKEAII 486
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
SRG G+Y I+ + Q +K P Y + +G A + + E +I+ F AI+
Sbjct: 95 FSRGYNLFGLGRYEEEIANYKQAIKIYPDYFQPWYYQGIALGYLGQTEESIASFERAIEI 154
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ W +G LG +A+ + ++A+E EPN +RG F AV
Sbjct: 155 APNFHAGWYGQGIELDNLGRFEDAVSNFNRAIEIEPNFYQAWFKRGFSLGNLNKFEEAVS 214
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + V+++ + ++ GLAL IG Y+ A + +AI++D + E W +L
Sbjct: 215 NFNRAVEIEPNHSPSWHCRGLALGQIGRYEDAIYSFERAIEIDSDEPEIWRDRGFAQINL 274
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
E+A+ ++ L I + LRG+LL + ++++A L + I+P E
Sbjct: 275 DRYEEAIFSYERYLNIQINDCNIWFLRGVLLKYIDKYEEAETSLDRAIQINPDFFEA 331
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 38/273 (13%)
Query: 371 TRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
T + ++ I+ DF RG+ + +I+ +D+ ++ + EA G+G
Sbjct: 316 TSLDRAIQINPDFFEAWCERGLVCFFLARNQDSIASYDRAIELNADLHEAWFGKGLTLKT 375
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + AI+ + AI+ P EAW RG A A+ + EAI + +A+E P+ + +
Sbjct: 376 IGQYKNAIASYDRAIEIKPDYYEAWSNRGSALEAISKYKEAIANYDRAIEINPDFHLVWY 435
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RGI ++ A+ + +KL ++ + LG+AL ++G YK+A AI++
Sbjct: 436 NRGISLEHLGQYSEAIPNFERAIKLKPDDYQSLFRLGVALDNLGWYKEAIINLTLAIEIK 495
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+F +AW L G++L LGQ+K+AI
Sbjct: 496 PDFSDAWCSL----------------------------------GVVLENLGQYKEAIAS 521
Query: 608 LSSGLGIDPSNIECLYL-RASCYHAIGEYREAV 639
+ + P N+ ++ R + Y Y+ +
Sbjct: 522 YEQSIKLKPDNLYQVWANRGAAYGRFKGYQSQI 554
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 19/232 (8%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L G G Q EL + +S E W RG LG E I + +A
Sbjct: 63 EGLAGLG-----QGELAETAGQLIRSWESEIDDAETWFSRGYNLFGLGRYEEEIANYKQA 117
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ P+ + +GI ++ +++ + + G+ L ++G ++
Sbjct: 118 IKIYPDYFQPWYYQGIALGYLGQTEESIASFERAIEIAPNFHAGWYGQGIELDNLGRFED 177
Query: 536 AEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
A +AI+++ NF +AW G+L +F + ++N +A+E I+ S ++
Sbjct: 178 AVSNFNRAIEIEPNFYQAWFKRGFSLGNLNKFEEAVSNFNRAVE-------IEPNHSPSW 230
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
H RGL L +G+++ AI + ID E R + Y EA+
Sbjct: 231 HCRGLALGQIGRYEDAIYSFERAIEIDSDEPEIWRDRGFAQINLDRYEEAIF 282
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A KY AI+ +D+ ++ +P + RG + + AI +F AI+
Sbjct: 402 NRGSALEAISKYKEAIANYDRAIEINPDFHLVWYNRGISLEHLGQYSEAIPNFERAIKLK 461
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P ++ R G A LG EAI +L+ A+E +P+ +D G+V + A+
Sbjct: 462 PDDYQSLFRLGVALDNLGWYKEAIINLTLAIEIKPDFSDAWCSLGVVLENLGQYKEAIAS 521
Query: 506 LSACVKLDKEN-KSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+KL +N + G A Y+ A+ +A+Q
Sbjct: 522 YEQSIKLKPDNLYQVWANRGAAYGRFKGYQSQINAYYQALQ 562
>gi|434385884|ref|YP_007096495.1| DNA/RNA helicase, superfamily I [Chamaesiphon minutus PCC 6605]
gi|428016874|gb|AFY92968.1| DNA/RNA helicase, superfamily I [Chamaesiphon minutus PCC 6605]
Length = 1119
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 127/256 (49%), Gaps = 2/256 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG + G+ A AI + + + DP Y +GRG A+ + AI D++ AI
Sbjct: 831 FDRGTEKYRLGQNAEAIDDYSRAITIDPQYVGVYVGRGAAKYNLGQHREAIDDYSRAITL 890
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A EA+ RG A+ LG+ EAI+D S A+ P A + RG + AA++
Sbjct: 891 NPQAAEAYFGRGTAKYNLGQHREAIEDYSHAITLNPQDAFAYYNRGFAKHSLGQYQAAID 950
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQD 563
D + + ++ ++ AY G A S+G+++ A + + I ++ EA+ G T Y +
Sbjct: 951 DYNCVIMINPQDIDAYFRRGAARHSLGQHQAAIDDYNFVIMINPQAAEAYVGRGTAKY-N 1009
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L + A++ + ++ + + AY+ RGL LG+ ++AI D + + ++P Y
Sbjct: 1010 LGQHQAAIDDCNFAITLNPQATDAYNNRGLAKCSLGRDREAIDDYNFAITLNPQYAVAYY 1069
Query: 624 LRASCYHAIGEYREAV 639
R + +G+ + A+
Sbjct: 1070 NRGLSKYNLGQSQAAI 1085
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 5/238 (2%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I++D + RG A+ N G++ AI + + + +P EA GRGTA+ +
Sbjct: 851 SRAITIDPQYVGVYVGRGAAKYNLGQHREAIDDYSRAITLNPQAAEAYFGRGTAKYNLGQ 910
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
AI D++ AI NP A+ RG A+ +LG+ AI D + + P D RG
Sbjct: 911 HREAIEDYSHAITLNPQDAFAYYNRGFAKHSLGQYQAAIDDYNCVIMINPQDIDAYFRRG 970
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
AA++D + + ++ + AY G A ++G+++ A + AI L+
Sbjct: 971 AARHSLGQHQAAIDDYNFVIMINPQAAEAYVGRGTAKYNLGQHQAAIDDCNFAITLNPQA 1030
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+A+ + L +A++ + ++ +++ AY+ RGL + LGQ + AI D
Sbjct: 1031 TDAYNNRGLAKCSLGRDREAIDDYNFAITLNPQYAVAYYNRGLSKYNLGQSQAAIPDF 1088
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
CV I+ +D RG A+ + G++ +AI ++ ++ +P EA +GRGTA+
Sbjct: 954 CVIMINPQ---DIDAYFRRGAARHSLGQHQAAIDDYNFVIMINPQAAEAYVGRGTAKYNL 1010
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ +AAI D AI NP A +A+ RG A+ +LG EAI D + A+ P A +
Sbjct: 1011 GQHQAAIDDCNFAITLNPQATDAYNNRGLAKCSLGRDREAIDDYNFAITLNPQYAVAYYN 1070
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL-DKENK 517
RG+ + AA+ D +L D+EN+
Sbjct: 1071 RGLSKYNLGQSQAAIPDFIKATELFDRENQ 1100
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G+Y +AI ++ ++ +P +A RG AR + +AAI D+ I N
Sbjct: 934 NRGFAKHSLGQYQAAIDDYNCVIMINPQDIDAYFRRGAARHSLGQHQAAIDDYNFVIMIN 993
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A EA+ RG A+ LG+ AI D + A+ P + D + RG+ A++D
Sbjct: 994 PQAAEAYVGRGTAKYNLGQHQAAIDDCNFAITLNPQATDAYNNRGLAKCSLGRDREAIDD 1053
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ + L+ + AY GL+ ++G+ + A +KA +L
Sbjct: 1054 YNFAITLNPQYAVAYYNRGLSKYNLGQSQAAIPDFIKATEL 1094
>gi|296127342|ref|YP_003634594.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019158|gb|ADG72395.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 352
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 124/233 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GI + G+YA AI +D+ +K +P +A + A+ L+ AI ++ +AI+
Sbjct: 103 SKGIYKSANGEYAEAIKYYDEAIKLNPNMSDAYYNKAIAKTKLGLLKEAIEEYDKAIELR 162
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ RG ++ L EAI+D KAL +PN D + +G++ + F A++D
Sbjct: 163 ADYADAYYNRGLLKSDLVLLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKD 222
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K+ + Y G + ++ Y++A + + KAI+L+ N+ A+ + +L
Sbjct: 223 FNKAIKISDNDAVIYNNRGNSKYNLELYEEAIKDYDKAIKLNPNYALAYNNRGNAKDNLG 282
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
E+A+E + + + ++ AY+ RGL LG +++A+KD L +DP+N
Sbjct: 283 LYEEAIEDFDKAIKLKPDYADAYNNRGLTKENLGLYEEALKDYKKALKLDPNN 335
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALI--GRGTARAFQR 429
K++S+D L ++G+ + G + AI F++ +K +A+I RG ++
Sbjct: 191 KALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKAIKISD--NDAVIYNNRGNSKYNLE 248
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E AI D+ +AI+ NP+ A+ RG A+ LG EAI+D KA++ +P+ AD + R
Sbjct: 249 LYEEAIKDYDKAIKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYADAYNNR 308
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ + A++D +KLD N+ A
Sbjct: 309 GLTKENLGLYEEALKDYKKALKLDPNNEYA 338
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 102/233 (43%), Gaps = 17/233 (7%)
Query: 424 ARAFQRELEAAISDFTEAIQS-----------------NPSAGEAWKRRGQARAALGESV 466
A+ F EL ISD T I S N + + +G ++A GE
Sbjct: 56 AKTFNEELNKIISDKTYLIGSFTNIVDNKKEVDIDRLNNLTDYHDYNSKGIYKSANGEYA 115
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ +A++ PN +D + + I K A+E+ ++L + AY GL
Sbjct: 116 EAIKYYDEAIKLNPNMSDAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYADAYYNRGLL 175
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
S + ++A + KA+ +D N +A+ + +L ++A++ + + I +
Sbjct: 176 KSDLVLLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKAIKISDNDAV 235
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y+ RG + L +++AIKD + ++P+ R + +G Y EA+
Sbjct: 236 IYNNRGNSKYNLELYEEAIKDYDKAIKLNPNYALAYNNRGNAKDNLGLYEEAI 288
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 20 ICEIDELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDICN 74
I DE ++++ M+ A A+ +L L ++ + KAI L + A +Y N
Sbjct: 118 IKYYDEAIKLNPNMSDAYYNKAIAKTKLGLLKEAIEEYDKAIE-LRADYADAY-----YN 171
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
R S L L + I+D DKAL +DP L AY KG + LG +EA+ + K
Sbjct: 172 RGLLKSDLVLLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKA 226
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++++KAI+I D+ + NR LEL++ I+D DKA++L+P AY
Sbjct: 219 AIKDFNKAIKISDN------DAVIYNNRGNSKYNLELYEEAIKDYDKAIKLNPNYALAYN 272
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G A LG EEA+ ++K
Sbjct: 273 NRGNAKDNLGLYEEAIEDFDKA 294
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ KAI+ L+ A +Y NR L L++ I D DKA++L P AY
Sbjct: 253 AIKDYDKAIK-LNPNYALAYN-----NRGNAKDNLGLYEEAIEDFDKAIKLKPDYADAYN 306
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G LG EEAL ++K
Sbjct: 307 NRGLTKENLGLYEEALKDYKKA 328
>gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101]
gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 1421
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 122/245 (49%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G SAI+ F+ ++ +P Y +A G R + ++ A+ +F AIQ NP+ E
Sbjct: 1146 GDILSAIADFENAIRLNPKYHQAYNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNN 1205
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + G+ A++D A++ PN A+ + G F+ DF A+ D +++
Sbjct: 1206 RGFTKFRRGDIPGAMKDFEAAIQINPNYAEAYNNLGNSRFQTGDFQGAMRDFGETLRIHP 1265
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY LAL +G++ A +A++++ + A+ +L + ++ + E+A+
Sbjct: 1266 KYVPAYNNRALALLKLGDFSGATTDCYQALKINPKYGLAYYNLGLIHTEMGDLEQAILDY 1325
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+VL I R AY RGL+ L + +AIKD +S L I+P+ R+ Y +GE
Sbjct: 1326 NEVLRIYPRKIDAYVNRGLIYLKLKNYTQAIKDQTSALNINPNLPHVYSFRSEGYIQLGE 1385
Query: 635 YREAV 639
++ +
Sbjct: 1386 FKAGI 1390
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A V G++ AI +F Q LK D + G R + + AI+D+ +AI+ NP+
Sbjct: 935 GAAYVELGEFNEAIELFSQALKVDSQDSQIYQNLGVVRFKAGDKQGAIADYNQAIKLNPN 994
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+ RG A LG + +A+ D +K L+ P D +RGIV F+ KD A+ D +
Sbjct: 995 KPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHPRVVDAYTQRGIVRFEVKDIEGAIADFN 1054
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+KL+ + H +AI +R + LT+ ++
Sbjct: 1055 DAIKLNPK------------------------HPEAI-YNRAIIR---RLTK------DN 1080
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+ +L+ L +V+ + ++ AY R ++ LG H+ A+KDL S + + P+N E Y RA+
Sbjct: 1081 QGSLDDLNKVIQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQPNNAEAYYQRAN 1140
Query: 628 CYHAIGEYREAV 639
++G+ A+
Sbjct: 1141 TKRSMGDILSAI 1152
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 128/304 (42%), Gaps = 34/304 (11%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ + VD RGI + AI+ F+ +K +P +PEA+ R R ++
Sbjct: 1020 TKVLQLHPRVVDAYTQRGIVRFEVKDIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLTKD 1079
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER- 489
+ ++ D + IQ +P +A+ +R R LG+ A++DL A++ +PN+A+ ++R
Sbjct: 1080 NQGSLDDLNKVIQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQPNNAEAYYQRA 1139
Query: 490 ---------------------------------GIVNFKFKDFNAAVEDLSACVKLDKEN 516
GIV + D + A+E+ A ++++
Sbjct: 1140 NTKRSMGDILSAIADFENAIRLNPKYHQAYNDMGIVRLRRGDISGAMENFEAAIQINPNY 1199
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ G G+ A + AIQ++ N+ EA+ +L + + A+ +
Sbjct: 1200 AEGHNNRGFTKFRRGDIPGAMKDFEAAIQINPNYAEAYNNLGNSRFQTGDFQGAMRDFGE 1259
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L I ++ AY+ R L L LG A D L I+P Y + +G+
Sbjct: 1260 TLRIHPKYVPAYNNRALALLKLGDFSGATTDCYQALKINPKYGLAYYNLGLIHTEMGDLE 1319
Query: 637 EAVI 640
+A++
Sbjct: 1320 QAIL 1323
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 116/233 (49%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + G AI+ ++Q +K +P PEA RG A F + A++DFT+ +Q +P
Sbjct: 969 GVVRFKAGDKQGAIADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHPR 1028
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ +RG R + + AI D + A++ P + ++ R I+ KD +++DL+
Sbjct: 1029 VVDAYTQRGIVRFEVKDIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLTKDNQGSLDDLN 1088
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L + AY + +G+++ A + A+QL N EA+ + + +
Sbjct: 1089 KVIQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQPNNAEAYYQRANTKRSMGDI 1148
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
A+ + + ++ ++ +AY+ G++ G A+++ + + I+P+ E
Sbjct: 1149 LSAIADFENAIRLNPKYHQAYNDMGIVRLRRGDISGAMENFEAAIQINPNYAE 1201
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
L +G + +R+ AI D+ +AI + + R A A +G AI++ KAL
Sbjct: 862 VLHNQGLIKLQKRDHTGAIEDYNQAIFLEKNNYLLYHNRAIAIAQMGNLKGAIENFKKAL 921
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E EP + G + +FN A+E S +K+D ++ Y LG+ G+ + A
Sbjct: 922 ELEPKDLQTYNNLGAAYVELGEFNEAIELFSQALKVDSQDSQIYQNLGVVRFKAGDKQGA 981
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ +AI+L+ N EA+ + Y+ L +++ A+ +VL + R AY RG++
Sbjct: 982 IADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHPRVVDAYTQRGIVRF 1041
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ + AI D + + ++P + E +Y RA
Sbjct: 1042 EVKDIEGAIADFNDAIKLNPKHPEAIYNRA 1071
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 82/158 (51%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ ++LH +G++ + +D A+ED + + L+K N Y +A++ +G K A E
Sbjct: 859 AVNVLHNQGLIKLQKRDHTGAIEDYNQAIFLEKNNYLLYHNRAIAIAQMGNLKGAIENFK 918
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KA++L+ L+ + +L Y +L +A+E Q L +D + S+ Y G++ G
Sbjct: 919 KALELEPKDLQTYNNLGAAYVELGEFNEAIELFSQALKVDSQDSQIYQNLGVVRFKAGDK 978
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI D + + ++P+ E Y R Y +G ++A+
Sbjct: 979 QGAIADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAM 1016
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 7/198 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G A+ F+ ++ +P Y EA G +R + + A+ DF E ++ +
Sbjct: 1205 NRGFTKFRRGDIPGAMKDFEAAIQINPNYAEAYNNLGNSRFQTGDFQGAMRDFGETLRIH 1264
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R A LG+ A D +AL+ P + G+++ + D A+ D
Sbjct: 1265 PKYVPAYNNRALALLKLGDFSGATTDCYQALKINPKYGLAYYNLGLIHTEMGDLEQAILD 1324
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL-------EAWGHLT 558
+ +++ AY GL + Y +A + A+ ++ N E + L
Sbjct: 1325 YNEVLRIYPRKIDAYVNRGLIYLKLKNYTQAIKDQTSALNINPNLPHVYSFRSEGYIQLG 1384
Query: 559 QFYQDLANSEKALECLQQ 576
+F + + KA E QQ
Sbjct: 1385 EFKAGIDDLHKAAEIYQQ 1402
>gi|390438504|ref|ZP_10226967.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
(modular protein) [Microcystis sp. T1-4]
gi|389838086|emb|CCI31091.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
(modular protein) [Microcystis sp. T1-4]
Length = 1080
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 122/257 (47%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F +G + G + AI+ +D+ L+ P + A + RG A E AI+ + A+
Sbjct: 152 FWFQQGNQKYMNGDFLGAIASYDRALEIKPDFHLAWLIRGFALDNLGRFEKAIASWDRAL 211
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P EAW RG A LG +AI +ALEF+P+ + RG + F A
Sbjct: 212 EIKPDLHEAWNNRGNALGNLGRFGQAIASYDRALEFKPDDHLAWNNRGSALYYLGRFEQA 271
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ +++ + A+ G+AL ++G ++A ++ +A+++ ++ +AW +
Sbjct: 272 IASYDRALEIKPDKHEAWYGRGVALGNLGRSEQAIASYDRALEIKPDYHDAWNYRGIALA 331
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
DL E+A+ Q L I F A++ RG+ L LG+ ++AI L I P +
Sbjct: 332 DLGRFEQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEEAIASYDRALEIKPDLHQAW 391
Query: 623 YLRASCYHAIGEYREAV 639
Y R + +G + EA+
Sbjct: 392 YGRGNALKNLGRFEEAI 408
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 9/308 (2%)
Query: 337 KSSDSTESRSKLSFKWDMLKETSNEAKRNKKF--CVTRISKSKSISVDFRLS---RGIAQ 391
K +D TE +F + + N+ N F + ++ I DF L+ RG A
Sbjct: 139 KETDLTEVVQDAAFWF----QQGNQKYMNGDFLGAIASYDRALEIKPDFHLAWLIRGFAL 194
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
N G++ AI+ +D+ L+ P EA RG A AI+ + A++ P A
Sbjct: 195 DNLGRFEKAIASWDRALEIKPDLHEAWNNRGNALGNLGRFGQAIASYDRALEFKPDDHLA 254
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W RG A LG +AI +ALE +P+ + + RG+ A+ ++
Sbjct: 255 WNNRGSALYYLGRFEQAIASYDRALEIKPDKHEAWYGRGVALGNLGRSEQAIASYDRALE 314
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ + A+ Y G+AL+ +G +++A + +A+++ +F AW + +L E+A+
Sbjct: 315 IKPDYHDAWNYRGIALADLGRFEQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEEAI 374
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+ L I +A++ RG L LG+ ++AI L I P E R +
Sbjct: 375 ASYDRALEIKPDLHQAWYGRGNALKNLGRFEEAIASYDHALEIKPDYHEAWNNRGNALAD 434
Query: 632 IGEYREAV 639
+G + EA+
Sbjct: 435 LGRFAEAI 442
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 118/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D+ L+ P A RG+A + E AI+ + A++
Sbjct: 223 NRGNALGNLGRFGQAIASYDRALEFKPDDHLAWNNRGSALYYLGRFEQAIASYDRALEIK 282
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG S +AI +ALE +P+ D + RGI F A+
Sbjct: 283 PDKHEAWYGRGVALGNLGRSEQAIASYDRALEIKPDYHDAWNYRGIALADLGRFEQAIAS 342
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G+ L ++G ++A ++ +A+++ + +AW ++L
Sbjct: 343 FDQALEIKPDFHLAWYNRGIELGNLGRLEEAIASYDRALEIKPDLHQAWYGRGNALKNLG 402
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ L I + +A++ RG L LG+ +AI L P + E R
Sbjct: 403 RFEEAIASYDHALEIKPDYHEAWNNRGNALADLGRFAEAIASYDRALEFKPDDHEAWNNR 462
Query: 626 ASCYHAIGEYREAV 639
+G EA+
Sbjct: 463 GFALGNLGRLEEAI 476
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G++ AI+ +D+ L+ P EA GRG A E AI+ + A++
Sbjct: 257 NRGSALYYLGRFEQAIASYDRALEIKPDKHEAWYGRGVALGNLGRSEQAIASYDRALEIK 316
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A A LG +AI +ALE +P+ + RGI A+
Sbjct: 317 PDYHDAWNYRGIALADLGRFEQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEEAIAS 376
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G AL ++G +++A ++ A+++ ++ EAW + DL
Sbjct: 377 YDRALEIKPDLHQAWYGRGNALKNLGRFEEAIASYDHALEIKPDYHEAWNNRGNALADLG 436
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+A+ + L +A++ RG L LG+ ++AI L I P
Sbjct: 437 RFAEAIASYDRALEFKPDDHEAWNNRGFALGNLGRLEEAIASYDRALEIKP 487
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 6/216 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA + G++ AI+ FDQ L+ P + A RG LE AI+ + A++ P
Sbjct: 326 RGIALADLGRFEQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEEAIASYDRALEIKP 385
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG A LG EAI ALE +P+ + + RG F A+
Sbjct: 386 DLHQAWYGRGNALKNLGRFEEAIASYDHALEIKPDYHEAWNNRGNALADLGRFAEAIASY 445
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ ++ A+ G AL ++G ++A ++ +A+++ +F EAWG+ L+
Sbjct: 446 DRALEFKPDDHEAWNNRGFALGNLGRLEEAIASYDRALEIKPDFHEAWGNRGWAVCSLSK 505
Query: 567 SEKALECLQQVLY------IDKRFSKAYHLRGLLLH 596
+ + L+ ++Y ++ R + LR L H
Sbjct: 506 NRISTPSLEALIYRKPIVALNDREPHIFALREALPH 541
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+A N G+ AI+ +D+ L+ P Y +A RG A A E AI+ F +A++
Sbjct: 291 GRGVALGNLGRSEQAIASYDRALEIKPDYHDAWNYRGIALADLGRFEQAIASFDQALEIK 350
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG LG EAI +ALE +P+ + RG F A+
Sbjct: 351 PDFHLAWYNRGIELGNLGRLEEAIASYDRALEIKPDLHQAWYGRGNALKNLGRFEEAIAS 410
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G AL+ +G + +A ++ +A++ + EAW + +L
Sbjct: 411 YDHALEIKPDYHEAWNNRGNALADLGRFAEAIASYDRALEFKPDDHEAWNNRGFALGNLG 470
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
E+A+ + L I F +A+ RG + L +++ + L +
Sbjct: 471 RLEEAIASYDRALEIKPDFHEAWGNRGWAVCSLSKNRISTPSLEA 515
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 8/150 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G++A AI+ +D+ L+ P EA RG A LE AI+ + A++
Sbjct: 427 NRGNALADLGRFAEAIASYDRALEFKPDDHEAWNNRGFALGNLGRLEEAIASYDRALEIK 486
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A +L ++ + L + +P A L++R F + E
Sbjct: 487 PDFHEAWGNRGWAVCSLSKNRISTPSLEALIYRKPIVA--LNDREPHIFALR------EA 538
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L ++ Y YLG A YK+
Sbjct: 539 LPHLIQGSPPWGQIYRYLGQAYLKHSRYKE 568
>gi|145478569|ref|XP_001425307.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392376|emb|CAK57909.1| unnamed protein product [Paramecium tetraurelia]
Length = 1388
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 133/257 (51%), Gaps = 10/257 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPM-YPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+GI G A+++F + ++ D M YP RA ++E E A+ +F +AI+
Sbjct: 128 KGIIMKESGSQQEALAVFQKTIELDQMNYPAHYQSGLILRALKKE-EDALLEFNKAIEIR 186
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P++ +A+ R + + + EA+ D +K +E +P A RGI+ + + + A+ D
Sbjct: 187 PTSSDAYFERAELLTDMNKKEEALVDYNKTIELDPKKAQTYECRGILLKQLEKYEEALSD 246
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ + + + GL + E +KA E + +AI ++ F +A+ + Y+++
Sbjct: 247 YNMAIKLNPKVYKWFYFQGLLFKVLNEKEKALEEYNQAISVNPKFAKAYKNRAILYKEID 306
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGL--------LLHGLGQHKKAIKDLSSGLGIDPS 617
++KAL ++L ++ + K Y RG LL LGQ++ A++D + + I+P+
Sbjct: 307 QNDKALSDYTKILELNPKDEKIYQFRGKKLVLIKGNLLKQLGQNELALQDYTKTIEINPN 366
Query: 618 NIECLYLRASCYHAIGE 634
+ E RA+ Y +G+
Sbjct: 367 DTENYVRRATLYKQLGQ 383
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 126/592 (21%), Positives = 248/592 (41%), Gaps = 79/592 (13%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
RA + + + + D +K ++LDP Q Y +G L + EEALS Y A+
Sbjct: 196 RAELLTDMNKKEEALVDYNKTIELDPKKAQTYECRGILLKQLEKYEEALS----DYNMAI 251
Query: 135 HQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHN- 193
+ + ++ + LL ++ +L ++ N K ++ +N
Sbjct: 252 KLNPKVYKWFYFQGLLFKVLNEKE-----------KALEEYNQAISVNPKFAKAYKNRAI 300
Query: 194 -KSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSE 252
+I + D ++ + D + R G + + K L L+++ +
Sbjct: 301 LYKEIDQNDKALSDYTKILELNPKDEKIYQFR------GKKLVLIKGNL-----LKQLGQ 349
Query: 253 NHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLS 312
N D +K+ EIN ++++ + +A++ ++ G+ T D +DK+
Sbjct: 350 NELALQDYTKTI-------EINPNDTENY------VRRATLYKQLGQNDLATKD-YDKI- 394
Query: 313 SDSASLNDSNTNSESYSKSSISD-------------NKSSDSTESRSKLSFKWDMLKETS 359
L NS Y K ++ N++ + L K L + +
Sbjct: 395 -----LEIEPKNSNVYYKKALFLEELQQNELAITLLNQAIQLNPQDANLYLKRGDLNKLT 449
Query: 360 NEAKRNKKFCVTRISKSKSISVDFR---LSRGI--AQVNEGKYASAISIFDQILKEDPMY 414
N+ V SK+ I+ + L+R + Q+N+ + A F +IL+ + +
Sbjct: 450 NQLD----MAVNDYSKAIEINPNNEVALLNRALLFKQLNQTE--RAFQDFHRILEINHNH 503
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
A RG + E A+ DF + IQ +P + R + ++ A+QDL+
Sbjct: 504 LNAYHHRGNLYKELNQDELALQDFNKIIQIDPKIVIVYYNRAKIYQKQQKNDLALQDLNV 563
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+E +P L ERGI+ + + + A+ D + ++++ A+ LG L S+ + +
Sbjct: 564 AVELDPKITYTLVERGILYYNMNEKDKALNDYNKAIEINPRCYDAHVNLGNLLKSLDQNQ 623
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A +++ KA +LD+N A+ + + L EKAL + + ++ + + +Y R L
Sbjct: 624 QALDSYNKAAELDQNNYLAYHNRAILWNKLNEKEKALADFDKAILLNPKSAVSYSSRASL 683
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSN-IECLYL------RASCYHAIGEYREAV 639
L + Q +AI D + L I+P I+ ++L + AI +Y EA+
Sbjct: 684 LSDMNQKDRAIDDFTKSLQINPKQRIQFIFLGNLHKQKQQISQAIQDYTEAI 735
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
+ S D R + K A+ +++ ++ DP + RG + E A+S
Sbjct: 186 RPTSSDAYFERAELLTDMNKKEEALVDYNKTIELDPKKAQTYECRGILLKQLEKYEEALS 245
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D+ AI+ NP + + +G L E +A+++ ++A+ P A R I+ +
Sbjct: 246 DYNMAIKLNPKVYKWFYFQGLLFKVLNEKEKALEEYNQAISVNPKFAKAYKNRAILYKEI 305
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLA--------LSSIGEYKKAEEAHLKAIQLDR 548
+ A+ D + ++L+ +++ Y + G L +G+ + A + + K I+++
Sbjct: 306 DQNDKALSDYTKILELNPKDEKIYQFRGKKLVLIKGNLLKQLGQNELALQDYTKTIEINP 365
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N E + Y+ L ++ A + ++L I+ + S Y+ + L L L Q++ AI L
Sbjct: 366 NDTENYVRRATLYKQLGQNDLATKDYDKILEIEPKNSNVYYKKALFLEELQQNELAITLL 425
Query: 609 SSGLGIDPSNIECLYLR 625
+ + ++P + LYL+
Sbjct: 426 NQAIQLNPQDAN-LYLK 441
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 127/286 (44%), Gaps = 25/286 (8%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
E SN+AK KS+++ + L + +VNE LK + Y E
Sbjct: 15 ELSNKAK-------DHFEKSQTLHQNQVLDDALNEVNEA------------LKINSNYSE 55
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
AL + + + + A+ + +AIQ NP EA+ R A+ D
Sbjct: 56 ALNLKAEILVKKGDTKQALEEVNKAIQLNPQLKEAYYNRALIFRKNKAYNLALNDAEMYY 115
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ +P S ++ +GI+ + A+ ++LD+ N A+ GL L ++ KK
Sbjct: 116 QLDPQSTKTINFKGIIMKESGSQQEALAVFQKTIELDQMNYPAHYQSGLILRAL---KKE 172
Query: 537 EEAHL---KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
E+A L KAI++ +A+ + D+ E+AL + + +D + ++ Y RG+
Sbjct: 173 EDALLEFNKAIEIRPTSSDAYFERAELLTDMNKKEEALVDYNKTIELDPKKAQTYECRGI 232
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LL L ++++A+ D + + ++P + Y + + + E +A+
Sbjct: 233 LLKQLEKYEEALSDYNMAIKLNPKVYKWFYFQGLLFKVLNEKEKAL 278
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 107/230 (46%), Gaps = 1/230 (0%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP L+ RG E + A++D+ +AI+ NP +A G +L ++ +A+
Sbjct: 568 DPKITYTLVERGILYYNMNEKDKALNDYNKAIEINPRCYDAHVNLGNLLKSLDQNQQALD 627
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
+KA E + N+ H R I+ K + A+ D + L+ ++ +Y+ LS +
Sbjct: 628 SYNKAAELDQNNYLAYHNRAILWNKLNEKEKALADFDKAILLNPKSAVSYSSRASLLSDM 687
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+ +A + K++Q++ + L ++ +A++ + + I+ + Y
Sbjct: 688 NQKDRAIDDFTKSLQINPKQRIQFIFLGNLHKQKQQISQAIQDYTEAININPNQADYYVS 747
Query: 591 RGLLLHGLG-QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG +L +H+KA++D + + I P++ Y RA Y +I + A+
Sbjct: 748 RGNILQDPAKEHEKALQDYNKAIEIAPNSFISYYQRALLYRSIDKIELAI 797
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
K AI+ +++ L +P AL+ RG A + + A++DFT+ I+ P+ +
Sbjct: 833 NKPQDAIAEYNKALIINPTCTSALLKRGDAYDLMKNHQEALNDFTKVIEIIPNESGGYSS 892
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R L + EA+QD +KA+E P A + R I + + A++D + ++L+
Sbjct: 893 RAPLLMKLAQKEEALQDYNKAIEVNPGEAANYYNRAIYYNQVQQKELALQDYNKTIELNS 952
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWGHLTQFYQDLANSEKAL 571
+ AY L L SIG +A + L A +L + FL G ++Y D EKA
Sbjct: 953 NSYLAYNNRALLLQSIGRKDEALQDVLNANRLCPDNPLFLANLG--DRYYSD-QQFEKAT 1009
Query: 572 ECLQQV-LYID 581
+Q YID
Sbjct: 1010 HYYKQAQFYID 1020
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 98/219 (44%), Gaps = 9/219 (4%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E E A++DF +AI NP + ++ R + + + AI D +K+L+ P
Sbjct: 655 EKEKALADFDKAILLNPKSAVSYSSRASLLSDMNQKDRAIDDFTKSLQINPKQRIQFIFL 714
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG-EYKKAEEAHLKAIQLDR 548
G ++ + + + A++D + + ++ Y G L E++KA + + KAI++
Sbjct: 715 GNLHKQKQQISQAIQDYTEAININPNQADYYVSRGNILQDPAKEHEKALQDYNKAIEIAP 774
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG--------LLLHGLGQ 600
N ++ Y+ + E A+ + + I+ + Y ++G L+ L +
Sbjct: 775 NSFISYYQRALLYRSIDKIELAIADCNKSIEINPKNELPYIVKGNFDLLILGLIFKELNK 834
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI + + L I+P+ L R Y + ++EA+
Sbjct: 835 PQDAIAEYNKALIINPTCTSALLKRGDAYDLMKNHQEAL 873
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 19/251 (7%)
Query: 382 DFRLSRG-IAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAI 435
D+ +SRG I Q ++ A+ +++ ++ P Y AL+ R + +E AI
Sbjct: 743 DYYVSRGNILQDPAKEHEKALQDYNKAIEIAPNSFISYYQRALLYRSIDK-----IELAI 797
Query: 436 SDFTEAIQSNPSAGEAWKRRGQ--------ARAALGESVEAIQDLSKALEFEPNSADILH 487
+D ++I+ NP + +G L + +AI + +KAL P L
Sbjct: 798 ADCNKSIEINPKNELPYIVKGNFDLLILGLIFKELNKPQDAIAEYNKALIINPTCTSALL 857
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+RG K+ A+ D + +++ Y+ L + + ++A + + KAI+++
Sbjct: 858 KRGDAYDLMKNHQEALNDFTKVIEIIPNESGGYSSRAPLLMKLAQKEEALQDYNKAIEVN 917
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ + +Y + E AL+ + + ++ AY+ R LLL +G+ +A++D
Sbjct: 918 PGEAANYYNRAIYYNQVQQKELALQDYNKTIELNSNSYLAYNNRALLLQSIGRKDEALQD 977
Query: 608 LSSGLGIDPSN 618
+ + + P N
Sbjct: 978 VLNANRLCPDN 988
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 117/273 (42%), Gaps = 18/273 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RGI N + A++ +++ ++ +P +A + G + + A+ + +A +
Sbjct: 576 VERGILYYNMNEKDKALNDYNKAIEINPRCYDAHVNLGNLLKSLDQNQQALDSYNKAAEL 635
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + A+ R L E +A+ D KA+ P SA R + + A++
Sbjct: 636 DQNNYLAYHNRAILWNKLNEKEKALADFDKAILLNPKSAVSYSSRASLLSDMNQKDRAID 695
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++++ + + + +LG + +A + + +AI ++ N + + QD
Sbjct: 696 DFTKSLQINPKQRIQFIFLGNLHKQKQQISQAIQDYTEAININPNQADYYVSRGNILQDP 755
Query: 565 ANS-EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
A EKAL+ + + I +Y+ R LL + + + AI D + + I+P N E Y
Sbjct: 756 AKEHEKALQDYNKAIEIAPNSFISYYQRALLYRSIDKIELAIADCNKSIEINPKN-ELPY 814
Query: 624 LRASCY----------------HAIGEYREAVI 640
+ + AI EY +A+I
Sbjct: 815 IVKGNFDLLILGLIFKELNKPQDAIAEYNKALI 847
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIEL-----AKLCSLRNWSKAIRILDSLLAQSY 67
L K + E ++ + + + A R EL K +L +++K I LD AQ+Y
Sbjct: 169 LKKEEDALLEFNKAIEIRPTSSDAYFERAELLTDMNKKEEALVDYNKTIE-LDPKKAQTY 227
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
E C R QLE ++ + D + A++L+P + + + +G F L KE+AL +
Sbjct: 228 E----C-RGILLKQLEKYEEALSDYNMAIKLNPKVYKWFYFQGLLFKVLNEKEKALEEYN 282
Query: 128 KG 129
+
Sbjct: 283 QA 284
>gi|34540729|ref|NP_905208.1| hypothetical protein PG0982 [Porphyromonas gingivalis W83]
gi|34397043|gb|AAQ66107.1| TPR domain protein [Porphyromonas gingivalis W83]
Length = 750
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 127/253 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G Y AI + + ++ D + A RG A + E AI DF++AI+ +
Sbjct: 30 NRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAIELD 89
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG A + G +AI+D S+A+E + + RG+ + + A++D
Sbjct: 90 DKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYCEKGSYEEAIKD 149
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++LD + AY G A S G YKKA + + +AI+LD F A+ Y +
Sbjct: 150 YSKAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDGKFAHAYYGRGNAYCEKG 209
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ E+A++ Q + +D +++ AYH RG G +KKAIKD S + +D I R
Sbjct: 210 SYEEAIKDYSQAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGR 269
Query: 626 ASCYHAIGEYREA 638
Y+ IG++ ++
Sbjct: 270 GVAYYEIGDFEKS 282
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 5/248 (2%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I +D + +RG+A +G Y AI F + ++ D + A GRG A + +
Sbjct: 49 SKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAIELDDKFVHAYHGRGNAYSKKGW 108
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI D+++AI+ + + RG A G EAI+D SKA+E + A H RG
Sbjct: 109 YKKAIKDYSQAIELDDKYILGYNGRGVAYCEKGSYEEAIKDYSKAIELDDKYAPAYHGRG 168
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K + A++D S ++LD + AY G A G Y++A + + +AI+LD +
Sbjct: 169 NAYSKKGWYKKAIKDYSQAIELDGKFAHAYYGRGNAYCEKGSYEEAIKDYSQAIELDDKY 228
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ Y +KA++ Q + +D ++ Y+ RG+ + +G +K+ D ++
Sbjct: 229 APAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYYEIGDFEKSQADFNT 288
Query: 611 GLGIDPSN 618
L + SN
Sbjct: 289 VLYLILSN 296
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%)
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ RG +G EAI+D SKA+E + + RG+ FK + A++D S +
Sbjct: 27 AYYNRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAI 86
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+LD + AY G A S G YKKA + + +AI+LD ++ + Y + + E+A
Sbjct: 87 ELDDKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYCEKGSYEEA 146
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
++ + + +D +++ AYH RG G +KKAIKD S + +D Y R + Y
Sbjct: 147 IKDYSKAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDGKFAHAYYGRGNAYC 206
Query: 631 AIGEYREAV 639
G Y EA+
Sbjct: 207 EKGSYEEAI 215
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A RG E AI D+++AI+ + A+ RG A G EAI+D SKA+
Sbjct: 27 AYYNRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAI 86
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E + H RG K + A++D S ++LD + Y G+A G Y++A
Sbjct: 87 ELDDKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYCEKGSYEEA 146
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ + KAI+LD + A+ Y +KA++ Q + +D +F+ AY+ RG
Sbjct: 147 IKDYSKAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDGKFAHAYYGRGNAYC 206
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G +++AIKD S + +D + R + Y G Y++A+
Sbjct: 207 EKGSYEEAIKDYSQAIELDDKYAPAYHGRGNAYSKKGWYKKAI 249
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 479 EPNSADIL--HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
EPN + + + RG+ + + A++D S ++LD + AY G+A G Y++A
Sbjct: 19 EPNRQEAIAYYNRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEA 78
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ KAI+LD F+ A+ Y +KA++ Q + +D ++ Y+ RG+
Sbjct: 79 IKDFSKAIELDDKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYC 138
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G +++AIKD S + +D + R + Y G Y++A+
Sbjct: 139 EKGSYEEAIKDYSKAIELDDKYAPAYHGRGNAYSKKGWYKKAI 181
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%)
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
LS + +++ AY G+ +G Y++A + + KAI+LD F+ A+ + Y
Sbjct: 14 LSNVPEPNRQEAIAYYNRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKG 73
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ E+A++ + + +D +F AYH RG G +KKAIKD S + +D I R
Sbjct: 74 SYEEAIKDFSKAIELDDKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGR 133
Query: 626 ASCYHAIGEYREAV 639
Y G Y EA+
Sbjct: 134 GVAYCEKGSYEEAI 147
>gi|254410536|ref|ZP_05024315.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196182742|gb|EDX77727.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 1491
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 119/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G+ A++ FDQ + P Y A RG A E A+++F +AI
Sbjct: 521 NRGVVLFELGRNEEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQ 580
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +RG A LG EA+ + + + +P+ +RG+ FK A+ +
Sbjct: 581 PDDYHAWFKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEALTN 640
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L ++ SA+ G+ L +G +++A +AI L ++ + W + L
Sbjct: 641 FDQVISLQPDDSSAWDNRGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRGAALFKLG 700
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+AL QV+ + + +A+ RG++L LG+HK+A+ + + + P + + R
Sbjct: 701 RYEEALANFDQVISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNR 760
Query: 626 ASCYHAIGEYREAV 639
+G Y EA+
Sbjct: 761 GVLLGELGRYEEAL 774
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 131/282 (46%), Gaps = 4/282 (1%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
E R+K+ +T + S+ D+ + RG+ G++ A++ FDQ++ P A
Sbjct: 800 ELGRHKE-ALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALANFDQVISLQPDDYHA 858
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
RG A E A+++F +AI P AW RG A LG EA+ + +A+
Sbjct: 859 WFKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAIS 918
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P+ RG++ K + A+ + + L + A+ G+ALS +G Y++A
Sbjct: 919 LQPDYYPAWDNRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEAL 978
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+AI L ++ + W + L E+AL L Q + + + +A+ R +L
Sbjct: 979 ANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANLDQAISLQPDYYQAWFNRSAMLSN 1038
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG++++A+ + + P + + + R + +G Y EA+
Sbjct: 1039 LGRYREALTSDDQVISLQPDDYQAWHNRGAALGELGRYEEAL 1080
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 117/255 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+A G++ A++ FDQ++ P A RG E A+++F +AI
Sbjct: 622 FKRGVALFKLGRHEEALTNFDQVISLQPDDSSAWDNRGVVLGELGRHEEALANFDQAISL 681
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + W RG A LG EA+ + + + +P+ RG+V + A+
Sbjct: 682 QPDYYQTWDNRGAALFKLGRYEEALANFDQVISLQPDYYQAWDNRGVVLGELGRHKEALA 741
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + L ++ SA+ G+ L +G Y++A ++ + I L + AW + +L
Sbjct: 742 NFDQVISLQPDDSSAWFNRGVLLGELGRYEEALTSYDQVISLQPDDSSAWFNRGVLLGEL 801
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++AL QV+ + + A+ RG++L LG+HK+A+ + + + P + +
Sbjct: 802 GRHKEALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALANFDQVISLQPDDYHAWFK 861
Query: 625 RASCYHAIGEYREAV 639
R +G Y EA+
Sbjct: 862 RGVALGELGRYEEAL 876
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 119/255 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ G++ A++ +DQ++ P Y A RG + A+++F + I
Sbjct: 792 FNRGVLLGELGRHKEALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALANFDQVISL 851
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW +RG A LG EA+ + +A+ +P+ RG+ + A+
Sbjct: 852 QPDDYHAWFKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALA 911
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + L + A+ G+ L +G Y++A +AI L +F +AW +L
Sbjct: 912 NFDQAISLQPDYYPAWDNRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSEL 971
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+AL Q + + + + + RGL+L LG++++A+ +L + + P + +
Sbjct: 972 GRYEEALANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANLDQAISLQPDYYQAWFN 1031
Query: 625 RASCYHAIGEYREAV 639
R++ +G YREA+
Sbjct: 1032 RSAMLSNLGRYREAL 1046
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 2/257 (0%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F+L G+A G+ A++ FDQ++ P Y A RG A E A+++F + I
Sbjct: 350 FKL--GVALGELGRNEEALASFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVI 407
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
P AW RG A LG EA+ + + + +P+ RG FK A
Sbjct: 408 SLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRNEEA 467
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ + L ++ A+ G+AL +G ++A + + I L ++ AW +
Sbjct: 468 LASFDQVISLQPDDYHAWFKRGVALGELGRNEEALASFDQVISLQPDYYPAWDNRGVVLF 527
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+L +E+AL Q + + +S A++ RG L LG+H++A+ + + + P +
Sbjct: 528 ELGRNEEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQPDDYHAW 587
Query: 623 YLRASCYHAIGEYREAV 639
+ R +G + EA+
Sbjct: 588 FKRGVALFKLGRHEEAL 604
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 148/334 (44%), Gaps = 14/334 (4%)
Query: 309 DKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKF 368
+KL+ A L S N ES S+ ST S ++ F + T E R ++
Sbjct: 146 EKLNQLLAGLKGSGYNQESVPVSN-------SSTVSGAEFWFNQGV---TLYELGRYEE- 194
Query: 369 CVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ + ++ S+ D+ +RG + G++ A++ FD+ + P Y +A GRG
Sbjct: 195 ALAKFDQAISLQPDYYHPWDNRGGVLIKLGRHKEALASFDRAISLQPDYYQAWRGRGVVL 254
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ A+++ +AI P + W RG A LG EA+ + +A+ +P+ +
Sbjct: 255 GMLGRHKEALANLDQAISLQPDFYKTWDNRGAALGELGRYEEALANFDQAISLQPDDSSA 314
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+V FK A+ + L ++ A+ LG+AL +G ++A + + I
Sbjct: 315 WNNRGVVLFKLGRNEEALASFDQVISLQPDDYHAWFKLGVALGELGRNEEALASFDQVIS 374
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L ++ AW + L E+AL QV+ + + A+ RG L LG++++A+
Sbjct: 375 LQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEAL 434
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + + P R + +G EA+
Sbjct: 435 ANFDQVISLQPDYYPAWDNRGAALFKLGRNEEAL 468
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+A G++ A++ FDQ++ P A RG A E A+++F + I
Sbjct: 588 FKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISL 647
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG LG EA+ + +A+ +P+ RG FK + A+
Sbjct: 648 QPDDSSAWDNRGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALA 707
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + L + A+ G+ L +G +K+A + I L + AW + +L
Sbjct: 708 NFDQVISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLLGEL 767
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+AL QV+ + S A+ RG+LL LG+HK+A+ + + P
Sbjct: 768 GRYEEALTSYDQVISLQPDDSSAWFNRGVLLGELGRHKEALTSYDQVISLQPDYYPAWDN 827
Query: 625 RASCYHAIGEYREAV 639
R +G ++EA+
Sbjct: 828 RGVVLGELGRHKEAL 842
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+A G+Y A++ FDQ + P + A RG A E A+++F +AI
Sbjct: 860 FKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAISL 919
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG LG EA+ + +A+ +P+ +G+ + + A+
Sbjct: 920 QPDYYPAWDNRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEALA 979
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + L + + GL L +G Y++A +AI L ++ +AW + + +L
Sbjct: 980 NFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANLDQAISLQPDYYQAWFNRSAMLSNL 1039
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+AL QV+ + +A+H RG L LG++++A+ + + + P + +
Sbjct: 1040 GRYREALTSDDQVISLQPDDYQAWHNRGAALGELGRYEEALANFDQAISLRPDDYQDWLN 1099
Query: 625 RASCYHAIGEYREAV 639
R +G + EA+
Sbjct: 1100 RGIALGELGRHEEAL 1114
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 4/291 (1%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
W L E RN++ + + S+ D+ + RG A G+Y A++ FDQ++
Sbjct: 349 WFKLGVALGELGRNEE-ALASFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVI 407
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
P Y A RG A E A+++F + I P AW RG A LG + EA
Sbjct: 408 SLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRNEEA 467
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ + + +P+ +RG+ + A+ + L + A+ G+ L
Sbjct: 468 LASFDQVISLQPDDYHAWFKRGVALGELGRNEEALASFDQVISLQPDYYPAWDNRGVVLF 527
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G ++A +AI L ++ AW + L E+AL Q + + A+
Sbjct: 528 ELGRNEEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQPDDYHAW 587
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG+ L LG+H++A+ + + + P + + R +G + EA+
Sbjct: 588 FKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEAL 638
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G++ A++ FDQ++ P A RG E A++ + + I
Sbjct: 725 NRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLLGELGRYEEALTSYDQVISLQ 784
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG LG EA+ + + +P+ RG+V + A+ +
Sbjct: 785 PDDSSAWFNRGVLLGELGRHKEALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALAN 844
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L ++ A+ G+AL +G Y++A +AI L +F AW + +L
Sbjct: 845 FDQVISLQPDDYHAWFKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELG 904
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+AL Q + + + A+ RG++L LG++++A+ + + + P + +
Sbjct: 905 RHEEALANFDQAISLQPDYYPAWDNRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGK 964
Query: 626 ASCYHAIGEYREAV 639
+G Y EA+
Sbjct: 965 GVALSELGRYEEAL 978
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 115/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G++ A++ FDQ + P Y + RG A E A+++F + I
Sbjct: 657 NRGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALANFDQVISLQ 716
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG LG EA+ + + + +P+ + RG++ + + A+
Sbjct: 717 PDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLLGELGRYEEALTS 776
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L ++ SA+ G+ L +G +K+A ++ + I L ++ AW + +L
Sbjct: 777 YDQVISLQPDDSSAWFNRGVLLGELGRHKEALTSYDQVISLQPDYYPAWDNRGVVLGELG 836
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL QV+ + A+ RG+ L LG++++A+ + + + P R
Sbjct: 837 RHKEALANFDQVISLQPDDYHAWFKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNR 896
Query: 626 ASCYHAIGEYREAV 639
+G + EA+
Sbjct: 897 GVALGELGRHEEAL 910
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 129/291 (44%), Gaps = 4/291 (1%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
WD E RN++ + ++ S+ D+ + RG A G++ A++ FDQ +
Sbjct: 519 WDNRGVVLFELGRNEE-ALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAI 577
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
P A RG A E A+++F + I P AW +RG A LG EA
Sbjct: 578 SLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEA 637
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ + + + +P+ + RG+V + A+ + + L + + G AL
Sbjct: 638 LTNFDQVISLQPDDSSAWDNRGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRGAALF 697
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G Y++A + I L ++ +AW + +L ++AL QV+ + S A+
Sbjct: 698 KLGRYEEALANFDQVISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAW 757
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG+LL LG++++A+ + + P + + R +G ++EA+
Sbjct: 758 FNRGVLLGELGRYEEALTSYDQVISLQPDDSSAWFNRGVLLGELGRHKEAL 808
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 4/291 (1%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
WD E R+++ + ++ S+ D+ + RG A G+Y A++ FDQ++
Sbjct: 655 WDNRGVVLGELGRHEE-ALANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALANFDQVI 713
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
P Y +A RG + A+++F + I P AW RG LG EA
Sbjct: 714 SLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLLGELGRYEEA 773
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ + + +P+ + RG++ + A+ + L + A+ G+ L
Sbjct: 774 LTSYDQVISLQPDDSSAWFNRGVLLGELGRHKEALTSYDQVISLQPDYYPAWDNRGVVLG 833
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G +K+A + I L + AW +L E+AL Q + + F A+
Sbjct: 834 ELGRHKEALANFDQVISLQPDDYHAWFKRGVALGELGRYEEALANFDQAISLQPDFYPAW 893
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG+ L LG+H++A+ + + + P R +G Y EA+
Sbjct: 894 DNRGVALGELGRHEEALANFDQAISLQPDYYPAWDNRGVMLIKLGRYEEAL 944
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 111/255 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ G+Y A++ +DQ++ P A RG + A++ + + I
Sbjct: 758 FNRGVLLGELGRYEEALTSYDQVISLQPDDSSAWFNRGVLLGELGRHKEALTSYDQVISL 817
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG LG EA+ + + + +P+ +RG+ + + A+
Sbjct: 818 QPDYYPAWDNRGVVLGELGRHKEALANFDQVISLQPDDYHAWFKRGVALGELGRYEEALA 877
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + L + A+ G+AL +G +++A +AI L ++ AW + L
Sbjct: 878 NFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAISLQPDYYPAWDNRGVMLIKL 937
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+AL Q + + F +A+ +G+ L LG++++A+ + + + P +
Sbjct: 938 GRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEALANFDQAISLQPDYYQTWDN 997
Query: 625 RASCYHAIGEYREAV 639
R +G Y EA+
Sbjct: 998 RGLVLIKLGRYEEAL 1012
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 3/251 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ S+ DF + RG+A G++ A++ FDQ + P Y A RG
Sbjct: 875 ALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAISLQPDYYPAWDNRGVML 934
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A+++F +AI P +AW+ +G A + LG EA+ + +A+ +P+
Sbjct: 935 IKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEALANFDQAISLQPDYYQT 994
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG+V K + A+ +L + L + A+ LS++G Y++A + + I
Sbjct: 995 WDNRGLVLIKLGRYEEALANLDQAISLQPDYYQAWFNRSAMLSNLGRYREALTSDDQVIS 1054
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L + +AW + +L E+AL Q + + + + RG+ L LG+H++A+
Sbjct: 1055 LQPDDYQAWHNRGAALGELGRYEEALANFDQAISLRPDDYQDWLNRGIALGELGRHEEAL 1114
Query: 606 KDLSSGLGIDP 616
+ + P
Sbjct: 1115 ASCDQAISLQP 1125
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G+ A++ FDQ++ P A G A E A++ F + I
Sbjct: 317 NRGVVLFKLGRNEEALASFDQVISLQPDDYHAWFKLGVALGELGRNEEALASFDQVISLQ 376
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG EA+ + + + +P+ RG FK + A+ +
Sbjct: 377 PDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEALAN 436
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + A+ G AL +G ++A + + I L + AW +L
Sbjct: 437 FDQVISLQPDYYPAWDNRGAALFKLGRNEEALASFDQVISLQPDDYHAWFKRGVALGELG 496
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+E+AL QV+ + + A+ RG++L LG++++A+ + + + P R
Sbjct: 497 RNEEALASFDQVISLQPDYYPAWDNRGVVLFELGRNEEALANFDQAISLQPDYSSAWNNR 556
Query: 626 ASCYHAIGEYREAV 639
+ +G + EA+
Sbjct: 557 GAALFKLGRHEEAL 570
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 114/276 (41%), Gaps = 3/276 (1%)
Query: 367 KFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
K + + ++ S+ DF + RG A G+Y A++ FDQ + P A RG
Sbjct: 261 KEALANLDQAISLQPDFYKTWDNRGAALGELGRYEEALANFDQAISLQPDDSSAWNNRGV 320
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
E A++ F + I P AW + G A LG + EA+ + + +P+
Sbjct: 321 VLFKLGRNEEALASFDQVISLQPDDYHAWFKLGVALGELGRNEEALASFDQVISLQPDYY 380
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
RG FK + A+ + + L + A+ G AL +G Y++A +
Sbjct: 381 PAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQV 440
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
I L ++ AW + L +E+AL QV+ + A+ RG+ L LG++++
Sbjct: 441 ISLQPDYYPAWDNRGAALFKLGRNEEALASFDQVISLQPDDYHAWFKRGVALGELGRNEE 500
Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A+ + + P R +G EA+
Sbjct: 501 ALASFDQVISLQPDYYPAWDNRGVVLFELGRNEEAL 536
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 105/254 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+ G++ A++ DQ + P + + RG A E A+++F +AI
Sbjct: 249 GRGVVLGMLGRHKEALANLDQAISLQPDFYKTWDNRGAALGELGRYEEALANFDQAISLQ 308
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG LG + EA+ + + +P+ + G+ + A+
Sbjct: 309 PDDSSAWNNRGVVLFKLGRNEEALASFDQVISLQPDDYHAWFKLGVALGELGRNEEALAS 368
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + A+ G AL +G Y++A + I L ++ AW + L
Sbjct: 369 FDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLG 428
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+AL QV+ + + A+ RG L LG++++A+ + + P + + R
Sbjct: 429 RYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRNEEALASFDQVISLQPDDYHAWFKR 488
Query: 626 ASCYHAIGEYREAV 639
+G EA+
Sbjct: 489 GVALGELGRNEEAL 502
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 109/245 (44%), Gaps = 4/245 (1%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
WD E R+++ + ++ S+ D+ + RG+ + G+Y A++ FDQ +
Sbjct: 893 WDNRGVALGELGRHEE-ALANFDQAISLQPDYYPAWDNRGVMLIKLGRYEEALANFDQAI 951
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
P + +A G+G A + E A+++F +AI P + W RG LG EA
Sbjct: 952 SLQPDFYQAWRGKGVALSELGRYEEALANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEA 1011
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ +L +A+ +P+ R + + A+ + L ++ A+ G AL
Sbjct: 1012 LANLDQAISLQPDYYQAWFNRSAMLSNLGRYREALTSDDQVISLQPDDYQAWHNRGAALG 1071
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G Y++A +AI L + + W + +L E+AL Q + + + +A+
Sbjct: 1072 ELGRYEEALANFDQAISLRPDDYQDWLNRGIALGELGRHEEALASCDQAISLQPDYYQAW 1131
Query: 589 HLRGL 593
RG+
Sbjct: 1132 SNRGV 1136
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQS 444
+RG+ + G+Y A++ DQ + P Y +A R + R EA SD + I
Sbjct: 997 NRGLVLIKLGRYEEALANLDQAISLQPDYYQAWFNRSAMLSNLGRYREALTSD-DQVISL 1055
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AW RG A LG EA+ + +A+ P+ RGI + A+
Sbjct: 1056 QPDDYQAWHNRGAALGELGRYEEALANFDQAISLRPDDYQDWLNRGIALGELGRHEEALA 1115
Query: 505 DLSACVKLDKENKSAYTYLGL-ALSSIGEYKKAEEAHLKAIQLDRN 549
+ L + A++ G+ A+ S G ++ +L+RN
Sbjct: 1116 SCDQAISLQPDYYQAWSNRGVAAMESFGYEYFWQQNFTDCFRLERN 1161
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L + + + D+ + + A R + L +L +L N+ +AI SL Y
Sbjct: 869 LGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAI----SLQPDYY 924
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
D NR +L ++ + + D+A+ L P QA+ KG A S LGR EEAL+
Sbjct: 925 PAWD--NRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEALA 979
>gi|440681896|ref|YP_007156691.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428679015|gb|AFZ57781.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 371
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 113/220 (51%), Gaps = 2/220 (0%)
Query: 421 RGTARAFQR-ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG AR FQR + +AAI D +A+ P A+ RG LG+ EAI D ++A++
Sbjct: 84 RGLAR-FQRGDNQAAIVDIKQALDYYPDFVAAYSNRGNIFYILGQYTEAIADYNQAIQLN 142
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
PN + H RG + KD+ A+ D + + ++ + AY GL +S + +Y+ A
Sbjct: 143 PNLSAAYHNRGNSRYALKDYQGAIADYNQALAINPQFGEAYYNRGLIMSHLQDYQSAIAD 202
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+AIQL+ +A+ Y +L + E A++ Q L ++ Y LR LH LG
Sbjct: 203 FNQAIQLNPGDDQAYHQRGLVYSNLEDYENAIQDYNQALQVNPTLPIVYGLRANALHHLG 262
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ AI D + L ++P+ +E RA+ + +G Y+ A+
Sbjct: 263 DYQSAIADSTRLLQLNPTLVEGYCDRANFHRLLGNYQGAI 302
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 110/214 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y AI+ ++Q ++ +P A RG +R ++ + AI+D+ +A+ NP GEA+
Sbjct: 126 GQYTEAIADYNQAIQLNPNLSAAYHNRGNSRYALKDYQGAIADYNQALAINPQFGEAYYN 185
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + L + AI D ++A++ P H+RG+V +D+ A++D + ++++
Sbjct: 186 RGLIMSHLQDYQSAIADFNQAIQLNPGDDQAYHQRGLVYSNLEDYENAIQDYNQALQVNP 245
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y AL +G+Y+ A + +QL+ +E + F++ L N + A+E
Sbjct: 246 TLPIVYGLRANALHHLGDYQSAIADSTRLLQLNPTLVEGYCDRANFHRLLGNYQGAIEDY 305
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ L + ++ AY LR + LG ++ AI D
Sbjct: 306 NRALQLQPNYATAYFLRANIHLHLGNNQAAIDDF 339
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 124/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G +AI Q L P + A RG + AI+D+ +AIQ N
Sbjct: 83 NRGLARFQRGDNQAAIVDIKQALDYYPDFVAAYSNRGNIFYILGQYTEAIADYNQAIQLN 142
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG +R AL + AI D ++AL P + + RG++ +D+ +A+ D
Sbjct: 143 PNLSAAYHNRGNSRYALKDYQGAIADYNQALAINPQFGEAYYNRGLIMSHLQDYQSAIAD 202
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ + AY GL S++ +Y+ A + + +A+Q++ +G L
Sbjct: 203 FNQAIQLNPGDDQAYHQRGLVYSNLEDYENAIQDYNQALQVNPTLPIVYGLRANALHHLG 262
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+ ++L ++ + Y R LG ++ AI+D + L + P+ +LR
Sbjct: 263 DYQSAIADSTRLLQLNPTLVEGYCDRANFHRLLGNYQGAIEDYNRALQLQPNYATAYFLR 322
Query: 626 ASCYHAIGEYREAV 639
A+ + +G + A+
Sbjct: 323 ANIHLHLGNNQAAI 336
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 136/269 (50%), Gaps = 9/269 (3%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
++V+ ++ G+ + G Y AI+ F+Q ++ +P RG A E + AI+D+
Sbjct: 1 MNVEELITEGVKKNLSGDYRGAITFFNQAIQLNPHLEIVYHYRGHAYLGLEEFDLAIADY 60
Query: 439 TEAIQS-------NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+A + N +A+ RG AR G++ AI D+ +AL++ P+ RG
Sbjct: 61 QQARHNSTGLENLNFDIAKAYHNRGLARFQRGDNQAAIVDIKQALDYYPDFVAAYSNRGN 120
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + + A+ D + ++L+ +AY G + ++ +Y+ A + +A+ ++ F
Sbjct: 121 IFYILGQYTEAIADYNQAIQLNPNLSAAYHNRGNSRYALKDYQGAIADYNQALAINPQFG 180
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + L + + A+ Q + ++ +AYH RGL+ L ++ AI+D +
Sbjct: 181 EAYYNRGLIMSHLQDYQSAIADFNQAIQLNPGDDQAYHQRGLVYSNLEDYENAIQDYNQA 240
Query: 612 LGIDPSNIECLY-LRASCYHAIGEYREAV 639
L ++P+ + +Y LRA+ H +G+Y+ A+
Sbjct: 241 LQVNPT-LPIVYGLRANALHHLGDYQSAI 268
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 122/253 (48%), Gaps = 13/253 (5%)
Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKS-----KSISVDFRLS-- 386
DN+++ + + L + D + SN + N + + + +++ ++I ++ LS
Sbjct: 92 GDNQAA-IVDIKQALDYYPDFVAAYSN--RGNIFYILGQYTEAIADYNQAIQLNPNLSAA 148
Query: 387 ---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
RG ++ Y AI+ ++Q L +P + EA RG + ++ ++AI+DF +AIQ
Sbjct: 149 YHNRGNSRYALKDYQGAIADYNQALAINPQFGEAYYNRGLIMSHLQDYQSAIADFNQAIQ 208
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP +A+ +RG + L + AIQD ++AL+ P + R D+ +A+
Sbjct: 209 LNPGDDQAYHQRGLVYSNLEDYENAIQDYNQALQVNPTLPIVYGLRANALHHLGDYQSAI 268
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + ++L+ Y +G Y+ A E + +A+QL N+ A+ +
Sbjct: 269 ADSTRLLQLNPTLVEGYCDRANFHRLLGNYQGAIEDYNRALQLQPNYATAYFLRANIHLH 328
Query: 564 LANSEKALECLQQ 576
L N++ A++ Q+
Sbjct: 329 LGNNQAAIDDFQK 341
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 42/100 (42%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y SAI+ ++L+ +P E R + AI D+ A+Q P+ A+
Sbjct: 262 GDYQSAIADSTRLLQLNPTLVEGYCDRANFHRLLGNYQGAIEDYNRALQLQPNYATAYFL 321
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
R LG + AI D K+ F + + + I+N
Sbjct: 322 RANIHLHLGNNQAAIDDFQKSANFFYQQGNTTYYQNIINL 361
>gi|239946448|ref|ZP_04698204.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239920724|gb|EER20751.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 375
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 134/246 (54%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y AI +D+ + +P Y +A +G + + E A+ ++ +AI+ P+ ++
Sbjct: 61 GRYEEAIECYDKSISLNPEYADAYNNKGNSFFDLEKYEEALVEYDKAIELKPNDACSYYN 120
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G + LG+ EAI++ +KA++ +P+ + + +GI + ++ ++ ++L
Sbjct: 121 KGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKP 180
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ Y G +L ++G+Y++A +A+ KAI+L+ N + DL E+A++C
Sbjct: 181 DDADIYNNKGTSLFNLGQYEEAIKAYNKAIELNPNDAVVINNKGTSLSDLEKYEEAIKCY 240
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q + ++ + +Y+ +G + LG++++AIK+ + + + P +E Y + + IGE
Sbjct: 241 NQAIELNPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGE 300
Query: 635 YREAVI 640
Y E++I
Sbjct: 301 YEESII 306
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 117/222 (52%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI +++ +K P Y E+ +G + E E +I + +AI+ P + +
Sbjct: 129 GKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNN 188
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G + LG+ EAI+ +KA+E PN A +++ +G + + A++ + ++L+
Sbjct: 189 KGTSLFNLGQYEEAIKAYNKAIELNPNDAVVINNKGTSLSDLEKYEEAIKCYNQAIELNP 248
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +Y G + +G+Y++A + + KAI+L +++E++ + ++ E+++
Sbjct: 249 NDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAY 308
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++ + + + Y+ +G L LG++++AIK + + + P
Sbjct: 309 EKAIELKPDDADIYNNKGTSLFNLGEYEEAIKAYNKSIELKP 350
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 119/233 (51%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K K V+ ++GI+ N G+Y +I +++ ++ P + +GT+ + E A
Sbjct: 143 KLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGQYEEA 202
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I + +AI+ NP+ +G + + L + EAI+ ++A+E PN A + +G +
Sbjct: 203 IKAYNKAIELNPNDAVVINNKGTSLSDLEKYEEAIKCYNQAIELNPNDACSYYNKGNSFY 262
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K + A+++ + +KL + +Y G++L +IGEY+++ A+ KAI+L + + +
Sbjct: 263 KLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIY 322
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ +L E+A++ + + + F+ A + R +++ LG A +D
Sbjct: 323 NNKGTSLFNLGEYEEAIKAYNKSIELKPDFAVAINNRTIVIEKLGSAGDATRD 375
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 92/193 (47%), Gaps = 34/193 (17%)
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A + + GQA A G EAI++ +KA++ +P+ D+L+ +
Sbjct: 12 AAKKYYDAGQALALRGRYEEAIKEYNKAIKLKPDE-DVLYYKK----------------- 53
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
G +L+ +G Y++A E + K+I L+ + +A+ + + DL
Sbjct: 54 ----------------GNSLAFLGRYEEAIECYDKSISLNPEYADAYNNKGNSFFDLEKY 97
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E+AL + + + + +Y+ +G + LG++++AIK+ + + + P +E Y +
Sbjct: 98 EEALVEYDKAIELKPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGI 157
Query: 628 CYHAIGEYREAVI 640
+ IGEY E++I
Sbjct: 158 SLYNIGEYEESII 170
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L L + +AI D ++ + E D N + + LE ++ + + DKA++L P
Sbjct: 57 LAFLGRYEEAIECYDKSISLNPEYADAYNNKGNSFFDLEKYEEALVEYDKAIELKPNDAC 116
Query: 105 AYILKGCAFSALGRKEEALSVWEKG 129
+Y KG +F LG+ EEA+ + K
Sbjct: 117 SYYNKGNSFYKLGKYEEAIKEYNKA 141
>gi|386828172|ref|ZP_10115279.1| tetratricopeptide repeat protein [Beggiatoa alba B18LD]
gi|386429056|gb|EIJ42884.1| tetratricopeptide repeat protein [Beggiatoa alba B18LD]
Length = 613
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 2/252 (0%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPS 447
IA Y + FD++++ P EA +GRG A RA R+ E AI F + IQ P
Sbjct: 198 IALATLTHYKEELETFDKVIQLQPDNAEAWLGRGVALRALTRD-EDAIEAFDKVIQLQPD 256
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EAW RG A + L EAI+ K ++ +P++A+ + +G + A++ +
Sbjct: 257 NAEAWHNRGNALSILTRYEEAIETFDKVIQLQPDNAETWNNQGYALNALTRYEEAIKAFN 316
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
V+L +N + G+ALS++ Y++A E++ KAIQ + AW A
Sbjct: 317 KAVQLQPDNAEIWFNRGIALSNLARYQEAIESYDKAIQFKPDLATAWSSRGVALFHSARY 376
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E+A+E + + + + A++ RGL L L ++++AI+ + P + R
Sbjct: 377 EEAIESCDKAIQFNPDLANAWYNRGLALRHLVRYEEAIESYDKAIECKPDFADAWNNRGI 436
Query: 628 CYHAIGEYREAV 639
+ + Y+E+V
Sbjct: 437 VLNYLARYKESV 448
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 139/287 (48%), Gaps = 22/287 (7%)
Query: 339 SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYA 398
SD+TE +WD+ T K + ++ + + + + L RG+A +
Sbjct: 190 SDNTE-------RWDIALATLTHYKEELE-TFDKVIQLQPDNAEAWLGRGVALRALTRDE 241
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
AI FD++++ P EA RG A + E AI F + IQ P E W +G A
Sbjct: 242 DAIEAFDKVIQLQPDNAEAWHNRGNALSILTRYEEAIETFDKVIQLQPDNAETWNNQGYA 301
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
AL EAI+ +KA++ +P++A+I RGI + A+E ++ + +
Sbjct: 302 LNALTRYEEAIKAFNKAVQLQPDNAEIWFNRGIALSNLARYQEAIESYDKAIQFKPDLAT 361
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKAL 571
A++ G+AL Y++A E+ KAIQ + + AW HL ++ + + + +KA+
Sbjct: 362 AWSSRGVALFHSARYEEAIESCDKAIQFNPDLANAWYNRGLALRHLVRYEEAIESYDKAI 421
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
EC F+ A++ RG++L+ L ++K++++ + + P++
Sbjct: 422 EC-------KPDFADAWNNRGIVLNYLARYKESVESFDKVIQLKPND 461
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 11/259 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A + +Y AI FD++++ P P+A + RG A +AA +F + ++
Sbjct: 27 LQRGSALIALSRYEEAIECFDKVIQLQPNNPDAWLQRGFALGVLTHYQAATENFDKTVKL 86
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+AW G R L A++D K ++ +PN+A +RG + A+E
Sbjct: 87 QADNTKAWDYNGVTRIVLSHYERALEDSDKIIQLQPNNATAWLDRGFALGALNRYEEAIE 146
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----GHLTQF 560
+ +KL +N A+ +AL+++ Y++A E KA QL + E W LT +
Sbjct: 147 SFNKVIKLQIDNADAWEESRVALATLTHYEEALENFNKAYQLQSDNTERWDIALATLTHY 206
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
++ LE +V+ + ++A+ RG+ L L + + AI+ + + P N E
Sbjct: 207 KEE-------LETFDKVIQLQPDNAEAWLGRGVALRALTRDEDAIEAFDKVIQLQPDNAE 259
Query: 621 CLYLRASCYHAIGEYREAV 639
+ R + + Y EA+
Sbjct: 260 AWHNRGNALSILTRYEEAI 278
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 4/240 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +Y AI FD++++ P E +G A E AI F +A+Q
Sbjct: 263 NRGNALSILTRYEEAIETFDKVIQLQPDNAETWNNQGYALNALTRYEEAIKAFNKAVQLQ 322
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W RG A + L EAI+ KA++F+P+ A RG+ F + A+E
Sbjct: 323 PDNAEIWFNRGIALSNLARYQEAIESYDKAIQFKPDLATAWSSRGVALFHSARYEEAIES 382
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + + +A+ GLAL + Y++A E++ KAI+ +F +AW + LA
Sbjct: 383 CDKAIQFNPDLANAWYNRGLALRHLVRYEEAIESYDKAIECKPDFADAWNNRGIVLNYLA 442
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGL---LLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
++++E +V+ + + A+ G+ L GL K A + + L I P+++ L
Sbjct: 443 RYKESVESFDKVIQLKPNDALAWSNYGVSLWRLSGLPTTKIA-EVFARALAIQPNHLLAL 501
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
I + IQ P EAW +RG A AL EAI+ K ++ +PN+ D +RG
Sbjct: 8 VIDTLDKVIQLQPDNAEAWLQRGSALIALSRYEEAIECFDKVIQLQPNNPDAWLQRGFAL 67
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ AA E+ VKL +N A+ Y G+ + Y++A E K IQL N A
Sbjct: 68 GVLTHYQAATENFDKTVKLQADNTKAWDYNGVTRIVLSHYERALEDSDKIIQLQPNNATA 127
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
W L E+A+E +V+ + + A+ + L L +++A+++ +
Sbjct: 128 WLDRGFALGALNRYEEAIESFNKVIKLQIDNADAWEESRVALATLTHYEEALENFNKAYQ 187
Query: 614 IDPSNIE 620
+ N E
Sbjct: 188 LQSDNTE 194
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 85 HKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
++ I CDKA+Q +P L A+ +G A L R EEA+ ++K E
Sbjct: 376 YEEAIESCDKAIQFNPDLANAWYNRGLALRHLVRYEEAIESYDKAIE 422
>gi|386002402|ref|YP_005920701.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
gi|357210458|gb|AET65078.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
Length = 1348
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 141/273 (51%), Gaps = 14/273 (5%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD S+G A ++ +Y AI +D+++K +P Y +A +GTA Q AI F E
Sbjct: 434 VDAWYSKGNALDSQSRYDEAIQAYDEVIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDE 493
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF---KFK 497
AI+ NP +AW +G A +L + EAIQ +A P AD ++G+ + K+K
Sbjct: 494 AIRRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATRLNPEDADAWLKKGVAFYHLGKYK 553
Query: 498 DF----NAAVEDLSACVKLDKENKSA-------YTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ N +++ ++ + E+ +A GLAL ++ +Y+ A +A+ +AI L
Sbjct: 554 ETIQVCNVSIQAYDDDLRWNPEDANARLSKGIALMLKGLALETLDKYEDAVQAYDEAISL 613
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + + AW + L ++A++ +VL ++ + A+ +G LH L +H++++K
Sbjct: 614 NPDDVAAWENRGAALYSLGKYDEAVQAYDEVLRLNPEDANAWKKKGYALHSLEEHEESVK 673
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + ++P++ C +++ I +Y EA+
Sbjct: 674 ALDEAIRLNPNDAGCWLIKSFNLLIIEKYDEAI 706
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 131/254 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A ++GKY AI +D+ ++ P Y +A +G A Q + + AI EAI +
Sbjct: 269 NKGVALNSQGKYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLD 328
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W +G A G+S EAI+ +A+ P AD + +G+ ++ A++
Sbjct: 329 PENANGWNIKGVALYNRGKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQT 388
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD E+ +A+ GL L++ G+Y +A +A +AI+L+ +++AW +
Sbjct: 389 FNETIRLDPEHVAAWYNKGLTLNNQGKYDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQS 448
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A++ +V+ ++ ++ A++ +G + G++ +AIK + +P + +
Sbjct: 449 RYDEAIQAYDEVIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDEAIRRNPEYADAWNNK 508
Query: 626 ASCYHAIGEYREAV 639
++ +Y EA+
Sbjct: 509 GVALVSLDKYEEAI 522
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 124/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G A ++G Y AI +++ ++ DP + +G Q + E AI + EAI+ N
Sbjct: 167 SKGYALYSQGNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLN 226
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +W +G A LG+ EAI+ ++A+ +P + H +G+ ++ A++
Sbjct: 227 PEDLNSWINKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAIQA 286
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L E A+ G AL G+Y +A +A +AI LD W +
Sbjct: 287 YDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANGWNIKGVALYNRG 346
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
S++A++ + + + ++ A++ +GL L G++ +AI+ + + +DP ++ Y +
Sbjct: 347 KSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEHVAAWYNK 406
Query: 626 ASCYHAIGEYREAV 639
+ G+Y EA+
Sbjct: 407 GLTLNNQGKYDEAI 420
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 7/261 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A +GKY AI +++ ++ DP Y A +G A Q + + AI + EAI+
Sbjct: 99 NKGLAFEKQGKYDEAIKAYNEAIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLY 158
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G A + G EAI+ ++A+ +P +G F + A+
Sbjct: 159 PEYANAWNSKGYALYSQGNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYA 218
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ E+ +++ G AL +G+Y +A A +AI+LD + AW +
Sbjct: 219 YDEAIRLNPEDLNSWINKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQG 278
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE----- 620
++A++ + + + ++ A++ +G L G++ +AI+ + + +DP N
Sbjct: 279 KYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANGWNIK 338
Query: 621 --CLYLRASCYHAIGEYREAV 639
LY R AI Y EA+
Sbjct: 339 GVALYNRGKSDEAIKAYDEAI 359
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 127/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G ++GKY AI +D+ ++ +P + I +G A + + AI EAI+ +
Sbjct: 201 NKGDTLFSQGKYELAIYAYDEAIRLNPEDLNSWINKGAALYRLGKYDEAIRASNEAIRLD 260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G A + G+ EAIQ +A+ P AD + +G ++ A++
Sbjct: 261 PENVYAWHNKGVALNSQGKYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQA 320
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + LD EN + + G+AL + G+ +A +A+ +AI+L + +AW + +
Sbjct: 321 SNEAISLDPENANGWNIKGVALYNRGKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQG 380
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A++ + + +D A++ +GL L+ G++ +AI+ + ++P ++ Y +
Sbjct: 381 KYDEAIQTFNETIRLDPEHVAAWYNKGLTLNNQGKYDEAIQAFDEAIRLNPEYVDAWYSK 440
Query: 626 ASCYHAIGEYREAV 639
+ + Y EA+
Sbjct: 441 GNALDSQSRYDEAI 454
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 128/255 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G A GKY AI ++ ++ DP A +G A Q + + AI + EAI+
Sbjct: 234 INKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAIQAYDEAIRL 293
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P +AW R+G+A G+ EAIQ ++A+ +P +A+ + +G+ + + A++
Sbjct: 294 SPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANGWNIKGVALYNRGKSDEAIK 353
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++L E A+ GL+L S G+Y +A + + I+LD + AW + +
Sbjct: 354 AYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEHVAAWYNKGLTLNNQ 413
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A++ + + ++ + A++ +G L ++ +AI+ + ++P +
Sbjct: 414 GKYDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAYDEVIKLNPEYADAWNS 473
Query: 625 RASCYHAIGEYREAV 639
+ + +++ G Y EA+
Sbjct: 474 KGTAFNSQGRYNEAI 488
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 114/227 (50%), Gaps = 4/227 (1%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P+ +G A Q + AI D+ EAI+ +P W +G A G+ EAI+ ++
Sbjct: 60 PDEWNNKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIKAYNE 119
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+ +P A+ H +G + ++ A++ + ++L E +A+ G AL S G Y
Sbjct: 120 AIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYSQGNYD 179
Query: 535 KAEEAHLKAIQLDRNFLEAWGHL--TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+A +A+ +AI+LD F+ W + T F Q E A+ + + ++ ++ +G
Sbjct: 180 EAIKAYNEAIRLDPEFMWPWRNKGDTLFSQ--GKYELAIYAYDEAIRLNPEDLNSWINKG 237
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L+ LG++ +AI+ + + +DP N+ + + ++ G+Y EA+
Sbjct: 238 AALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAI 284
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 121/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A +G Y AI + + ++ DP + +G A Q + + AI + EAI+ +
Sbjct: 65 NKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIKAYNEAIRLD 124
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G A G+ EAI+ ++A+ P A+ + +G + +++ A++
Sbjct: 125 PEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYSQGNYDEAIKA 184
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD E + G L S G+Y+ A A+ +AI+L+ L +W + L
Sbjct: 185 YNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLNPEDLNSWINKGAALYRLG 244
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ + + +D A+H +G+ L+ G++ +AI+ + + P + +
Sbjct: 245 KYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAIQAYDEAIRLSPEYADAWNRK 304
Query: 626 ASCYHAIGEYREAV 639
G+Y EA+
Sbjct: 305 GEALLHQGKYDEAI 318
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A N GK AI +D+ ++ P Y +A +G + Q + + AI F E I+ +P
Sbjct: 338 KGVALYNRGKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDP 397
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +G G+ EAIQ +A+ P D + +G ++ A++
Sbjct: 398 EHVAAWYNKGLTLNNQGKYDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAY 457
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+KL+ E A+ G A +S G Y +A +A +AI+ + + +AW + L
Sbjct: 458 DEVIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDEAIRRNPEYADAWNNKGVALVSLDK 517
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A++ + ++ + A+ +G+ + LG++K+ I+
Sbjct: 518 YEEAIQAFDEATRLNPEDADAWLKKGVAFYHLGKYKETIQ 557
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 124/253 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A +++GKY AI ++ + DP +G A + + + AI + EAI+ +P
Sbjct: 304 KGEALLHQGKYDEAIQASNEAISLDPENANGWNIKGVALYNRGKSDEAIKAYDEAIRLSP 363
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW +G + + G+ EAIQ ++ + +P + +G+ ++ A++
Sbjct: 364 EYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEHVAAWYNKGLTLNNQGKYDEAIQAF 423
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ E A+ G AL S Y +A +A+ + I+L+ + +AW +
Sbjct: 424 DEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAYDEVIKLNPEYADAWNSKGTAFNSQGR 483
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A++ + + + ++ A++ +G+ L L ++++AI+ ++P + + +
Sbjct: 484 YNEAIKAFDEAIRRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATRLNPEDADAWLKKG 543
Query: 627 SCYHAIGEYREAV 639
++ +G+Y+E +
Sbjct: 544 VAFYHLGKYKETI 556
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 93/195 (47%)
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N S + W +G A G EAIQD +A+ +P + +G+ K ++ A++
Sbjct: 56 NESDPDEWNNKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIK 115
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++LD E +A+ G AL G+Y +A +A+ +AI+L + AW
Sbjct: 116 AYNEAIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYSQ 175
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
N ++A++ + + +D F + +G L G+++ AI + ++P ++
Sbjct: 176 GNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLNPEDLNSWIN 235
Query: 625 RASCYHAIGEYREAV 639
+ + + +G+Y EA+
Sbjct: 236 KGAALYRLGKYDEAI 250
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 124/660 (18%), Positives = 250/660 (37%), Gaps = 116/660 (17%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
N+ +L + IR ++A++LDP + A+ KG A ++ G+ +EA+ + Y+
Sbjct: 234 INKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAI----QAYDE 289
Query: 133 ALHQSADLKQFL--ELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSE 190
A+ S + + E LL K D ++ S ++++ N +
Sbjct: 290 AIRLSPEYADAWNRKGEALLHQGKYDEAIQA------SNEAISLDPENANGWNIKGVALY 343
Query: 191 NHNKSD-ICDSSSQSRDVSETCSKSSHDPDLC---NGRSDEAKGGSSVPVSKSGLHINGK 246
N KSD + ++ +S + + ++ L G+ DEA + + H+
Sbjct: 344 NRGKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEHVAAW 403
Query: 247 L-REVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTH 305
+ ++ N+ G D ++ A +A +N + D + +D S R+
Sbjct: 404 YNKGLTLNNQGKYD--EAIQAFDEAIRLNPEYVDAWYSKGNALDSQS---RYDEAIQAYD 458
Query: 306 DV-------HDKLSSDSASLNDSNTNSES---YSKSSISDNKSSDSTESRSKLSFKWDML 355
+V D +S + N +E+ + ++ + + +D+ ++ D
Sbjct: 459 EVIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDEAIRRNPEYADAWNNKGVALVSLDKY 518
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISI-------FDQIL 408
+E TR++ + D L +G+A + GKY I + +D L
Sbjct: 519 EEAIQAFDE-----ATRLNPEDA---DAWLKKGVAFYHLGKYKETIQVCNVSIQAYDDDL 570
Query: 409 KEDPMYPEALIGRGTARAFQR-------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+ +P A + +G A + + E A+ + EAI NP AW+ RG A +
Sbjct: 571 RWNPEDANARLSKGIALMLKGLALETLDKYEDAVQAYDEAISLNPDDVAAWENRGAALYS 630
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERG------------------------------- 490
LG+ EA+Q + L P A+ ++G
Sbjct: 631 LGKYDEAVQAYDEVLRLNPEDANAWKKKGYALHSLEEHEESVKALDEAIRLNPNDAGCWL 690
Query: 491 IVNFKF-----------------KDFNAAVEDLSACVKLDKENKSA-------------- 519
I +F + +N + V L+ EN +A
Sbjct: 691 IKSFNLLIIEKYDEAINASEEAIRAYNETITTYEEIVSLNPENSTASNIKSRTLIAKGNG 750
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G+ L EY +A +A +A+ L+ W ++ D +A+E + +
Sbjct: 751 WALKGIILGEQHEYNEAMQAFNEAVSLNPAGSFIWSFKGKYLNDQGKYYEAIEAIDMAIS 810
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ + A++ +G L G G+H++AI + ++P + + + ++ G Y EA+
Sbjct: 811 LNPESALAWNYKGAALRGQGKHEEAILAYDEAIRLNPDDEDAWNNKGLALYSQGNYSEAI 870
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 77/162 (47%)
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F + D + +G + +++ A++D ++LD E + GLA G+Y +A
Sbjct: 55 FNESDPDEWNNKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAI 114
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+A+ +AI+LD + AW + ++A++ + + + ++ A++ +G L+
Sbjct: 115 KAYNEAIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYS 174
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G + +AIK + + +DP + + + G+Y A+
Sbjct: 175 QGNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAI 216
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 123/283 (43%), Gaps = 28/283 (9%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + GKY A+ +D++L+ +P A +G A E E ++ EAI+ N
Sbjct: 623 NRGAALYSLGKYDEAVQAYDEVLRLNPEDANAWKKKGYALHSLEEHEESVKALDEAIRLN 682
Query: 446 PSAGEAWKRRG-------QARAALGESVEAIQDLSK---------ALEFEPNSADILHER 489
P+ W + + A+ S EAI+ ++ +L E ++A + R
Sbjct: 683 PNDAGCWLIKSFNLLIIEKYDEAINASEEAIRAYNETITTYEEIVSLNPENSTASNIKSR 742
Query: 490 ------------GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
GI+ + ++N A++ + V L+ +++ G L+ G+Y +A
Sbjct: 743 TLIAKGNGWALKGIILGEQHEYNEAMQAFNEAVSLNPAGSFIWSFKGKYLNDQGKYYEAI 802
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
EA AI L+ AW + + E+A+ + + ++ A++ +GL L+
Sbjct: 803 EAIDMAISLNPESALAWNYKGAALRGQGKHEEAILAYDEAIRLNPDDEDAWNNKGLALYS 862
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
G + +AI+ + ++ ++ Y + A+ + +A +
Sbjct: 863 QGNYSEAIQAYDRAIDLNSQLVQAWYNKGDALDALKNFTQAAM 905
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 68/154 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI + +Y A+ F++ + +P +G Q + AI AI NP
Sbjct: 754 KGIILGEQHEYNEAMQAFNEAVSLNPAGSFIWSFKGKYLNDQGKYYEAIEAIDMAISLNP 813
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ AW +G A G+ EAI +A+ P+ D + +G+ + +++ A++
Sbjct: 814 ESALAWNYKGAALRGQGKHEEAILAYDEAIRLNPDDEDAWNNKGLALYSQGNYSEAIQAY 873
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ L+ + A+ G AL ++ + +A AH
Sbjct: 874 DRAIDLNSQLVQAWYNKGDALDALKNFTQAAMAH 907
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 3 KRKLLDSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSL 62
K LDS+ R ++ I DE+++++ A A ++ S +++AI+ D
Sbjct: 440 KGNALDSQSRYDEA---IQAYDEVIKLNPEYADAWNSK--GTAFNSQGRYNEAIKAFDEA 494
Query: 63 LAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
+ ++ E D N + L+ ++ I+ D+A +L+P A++ KG AF LG+ +E
Sbjct: 495 IRRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATRLNPEDADAWLKKGVAFYHLGKYKE 554
Query: 122 ALSV 125
+ V
Sbjct: 555 TIQV 558
>gi|428319183|ref|YP_007117065.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428242863|gb|AFZ08649.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 565
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI N G++ I+ +++ L+ P Y +A RG A LE AI+ + +A++
Sbjct: 105 NRGIGLGNLGRWEEGIASYNKTLEIKPDYHKAWYNRGIALHNLGLLEEAIASYDKALEFK 164
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI K LEF+P+ + + RGI + A+
Sbjct: 165 PDYHEAWNNRGNALGNLGRWEEAIASYEKVLEFKPDYHEAWNNRGITLGNLGRWEEAIAS 224
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G AL ++G ++A + KA++ ++ EAW + +L
Sbjct: 225 FDKALEFKADYHEAWNNRGNALGNLGRLEEAIASFDKALEFKADYHEAWNNRGNALGNLG 284
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + L + +A++ RG+ L LG+ ++A+ L I P + E Y R
Sbjct: 285 RLEEAIASFDKALEFKADYHQAWNNRGITLGKLGRLEEALASYDKALEIKPDD-EAWYNR 343
Query: 626 ASCYHAIGEYREAV 639
+G + EA+
Sbjct: 344 GIALGKLGRWEEAL 357
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 1/245 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + + FD+ L+ P P+A RG A E AI+ + +A++ P EAW
Sbjct: 13 GLFEKGRAFFDETLEMKPE-PQACYDRGVALGNSGRWEEAIASYDKALEFKPDYHEAWNN 71
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG EAI KALEF+P+ + RGI + + + +++
Sbjct: 72 RGNALGNLGRWEEAIASFDKALEFKPDDDVAWYNRGIGLGNLGRWEEGIASYNKTLEIKP 131
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G+AL ++G ++A ++ KA++ ++ EAW + +L E+A+
Sbjct: 132 DYHKAWYNRGIALHNLGLLEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRWEEAIASY 191
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++VL + +A++ RG+ L LG+ ++AI L E R + +G
Sbjct: 192 EKVLEFKPDYHEAWNNRGITLGNLGRWEEAIASFDKALEFKADYHEAWNNRGNALGNLGR 251
Query: 635 YREAV 639
EA+
Sbjct: 252 LEEAI 256
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 112/253 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A N G++ AI+ +D+ L+ P Y EA RG A E AI+ F +A++ P
Sbjct: 38 RGVALGNSGRWEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRWEEAIASFDKALEFKP 97
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG LG E I +K LE +P+ + RGI A+
Sbjct: 98 DDDVAWYNRGIGLGNLGRWEEGIASYNKTLEIKPDYHKAWYNRGIALHNLGLLEEAIASY 157
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + A+ G AL ++G +++A ++ K ++ ++ EAW + +L
Sbjct: 158 DKALEFKPDYHEAWNNRGNALGNLGRWEEAIASYEKVLEFKPDYHEAWNNRGITLGNLGR 217
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A+ + L + +A++ RG L LG+ ++AI L E R
Sbjct: 218 WEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEEAIASFDKALEFKADYHEAWNNRG 277
Query: 627 SCYHAIGEYREAV 639
+ +G EA+
Sbjct: 278 NALGNLGRLEEAI 290
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 2/244 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+ AI+ FD+ L+ Y +A RG LE A++ + +A++
Sbjct: 275 NRGNALGNLGRLEEAIASFDKALEFKADYHQAWNNRGITLGKLGRLEEALASYDKALEIK 334
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EA+ KALE +P+ + + RGI + A+
Sbjct: 335 PD-DEAWYNRGIALGKLGRWEEALASFDKALEIKPDKDEAWYNRGIALDDLGRWEEAIAS 393
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ ++ +A+ G+AL ++G ++A ++ KA+++ + E+W + +L
Sbjct: 394 YDKALEIIPDD-AAWNNRGIALGNLGRLEEAIASYDKALEIKPDSYESWYNRGSAMINLG 452
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + L I A++ RG L LG+ ++AI + L I P + E Y +
Sbjct: 453 RLEEAIASYDKALEIKPDDDAAWYNRGYSLRNLGRWEEAIASYNKALEIIPDDDEAFYNK 512
Query: 626 ASCY 629
A CY
Sbjct: 513 ACCY 516
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ FD+ L+ P A RG E I+ + + ++
Sbjct: 71 NRGNALGNLGRWEEAIASFDKALEFKPDDDVAWYNRGIGLGNLGRWEEGIASYNKTLEIK 130
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG EAI KALEF+P+ + + RG + A+
Sbjct: 131 PDYHKAWYNRGIALHNLGLLEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRWEEAIAS 190
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G+ L ++G +++A + KA++ ++ EAW + +L
Sbjct: 191 YEKVLEFKPDYHEAWNNRGITLGNLGRWEEAIASFDKALEFKADYHEAWNNRGNALGNLG 250
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
E+A+ + L + +A++ RG L LG+ ++AI L
Sbjct: 251 RLEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEEAIASFDKAL 297
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 97/193 (50%), Gaps = 1/193 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G++ A++ FD+ L+ P EA RG A E AI+ + +A++
Sbjct: 342 NRGIALGKLGRWEEALASFDKALEIKPDKDEAWYNRGIALDDLGRWEEAIASYDKALEII 401
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG EAI KALE +P+S + + RG A+
Sbjct: 402 PDDA-AWNNRGIALGNLGRLEEAIASYDKALEIKPDSYESWYNRGSAMINLGRLEEAIAS 460
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ ++ +A+ G +L ++G +++A ++ KA+++ + EA+ + Y +
Sbjct: 461 YDKALEIKPDDDAAWYNRGYSLRNLGRWEEAIASYNKALEIIPDDDEAFYNKACCYALQS 520
Query: 566 NSEKALECLQQVL 578
S++A+ LQQ +
Sbjct: 521 QSDQAIHNLQQAI 533
>gi|307154716|ref|YP_003890100.1| serine/threonine protein kinase [Cyanothece sp. PCC 7822]
gi|306984944|gb|ADN16825.1| serine/threonine protein kinase [Cyanothece sp. PCC 7822]
Length = 708
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 140/282 (49%), Gaps = 11/282 (3%)
Query: 368 FCVTRISKSKSISVDFRLSRGIA--QVNEG-------KYASAISIFDQILKEDPMYPEAL 418
+ ++ +S+D+ LS A N+G +Y A+ +D L +P A
Sbjct: 310 LAIIGLAAGGVVSIDYWLSLNNATKMYNKGNTLYQLQRYEDALQAYDTSLNINPNNANAW 369
Query: 419 IGRG-TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
G+G T +A +R + A+ + EAIQ P + +AW RG+ LG ++EAI K +
Sbjct: 370 QGKGDTLQALKR-YQQALDSYDEAIQIQPDSWQAWMGRGKVLEKLGRNLEAINSYEKVII 428
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F+ NS + G + K ++ A++DL +KL+ +N+ A+ G +L ++ +Y+ A
Sbjct: 429 FKDNSWEAWSNLGELKVKLAQYSEAIKDLEKSLKLNPDNEEAWYQKGWSLQNLKKYEDAI 488
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+++ + ++++ +F +AW Y +L +A E + + +A++ +G+ L+
Sbjct: 489 KSYDETVKVNSSFSQAWYQKGNIYMNLEKYNEASENYAKAVQFQPDLYQAWYSQGIALNR 548
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L ++++A+K + + E Y +A H + Y EAV
Sbjct: 549 LNRYEEALKTFEKATQVQSLSFEAWYQKAWTLHILKRYAEAV 590
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 106/234 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G +V +Y+ AI ++ LK +P EA +G + ++ E AI + E ++ N S
Sbjct: 441 GELKVKLAQYSEAIKDLEKSLKLNPDNEEAWYQKGWSLQNLKKYEDAIKSYDETVKVNSS 500
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+AW ++G L + EA ++ +KA++F+P+ + +GI + + A++
Sbjct: 501 FSQAWYQKGNIYMNLEKYNEASENYAKAVQFQPDLYQAWYSQGIALNRLNRYEEALKTFE 560
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++ + A+ L + Y +A A+ AI+L +AW + +
Sbjct: 561 KATQVQSLSFEAWYQKAWTLHILKRYAEAVSAYTTAIRLRPRDQQAWYNKANSLYNFGEY 620
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
E+A +QV+ + K + A+ G L L ++++AI + L P E
Sbjct: 621 EEATAAYKQVIALQKDYYPAWKSLGNSLLKLERYQEAINAYNQALRYKPDQPEV 674
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 87/192 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G + N KY AI +D+ +K + + +A +G + A ++ +A+Q P
Sbjct: 474 KGWSLQNLKKYEDAIKSYDETVKVNSSFSQAWYQKGNIYMNLEKYNEASENYAKAVQFQP 533
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW +G A L EA++ KA + + S + +++ K + AV
Sbjct: 534 DLYQAWYSQGIALNRLNRYEEALKTFEKATQVQSLSFEAWYQKAWTLHILKRYAEAVSAY 593
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L ++ A+ +L + GEY++A A+ + I L +++ AW L L
Sbjct: 594 TTAIRLRPRDQQAWYNKANSLYNFGEYEEATAAYKQVIALQKDYYPAWKSLGNSLLKLER 653
Query: 567 SEKALECLQQVL 578
++A+ Q L
Sbjct: 654 YQEAINAYNQAL 665
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 34/206 (16%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI D ++++ NP EAW ++G + L + +AI+ + ++ + + +++G +
Sbjct: 453 AIKDLEKSLKLNPDNEEAWYQKGWSLQNLKKYEDAIKSYDETVKVNSSFSQAWYQKGNIY 512
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ +N A E+ + V+ + A+ G+AL+ + Y++A + KA Q+ EA
Sbjct: 513 MNLEKYNEASENYAKAVQFQPDLYQAWYSQGIALNRLNRYEEALKTFEKATQVQSLSFEA 572
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
W + KA+ LH L ++ +A+ ++ +
Sbjct: 573 W-----------------------------YQKAW-----TLHILKRYAEAVSAYTTAIR 598
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
+ P + + Y +A+ + GEY EA
Sbjct: 599 LRPRDQQAWYNKANSLYNFGEYEEAT 624
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 46 LCSLRNWSKAIRILD-SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L+ + AI+ D ++ S Q + Y LE + + KA+Q P L Q
Sbjct: 478 LQNLKKYEDAIKSYDETVKVNSSFSQAWYQKGNIYMNLEKYNEASENYAKAVQFQPDLYQ 537
Query: 105 AYILKGCAFSALGRKEEALSVWEKG 129
A+ +G A + L R EEAL +EK
Sbjct: 538 AWYSQGIALNRLNRYEEALKTFEKA 562
>gi|414077915|ref|YP_006997233.1| hypothetical protein ANA_C12709 [Anabaena sp. 90]
gi|413971331|gb|AFW95420.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 460
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 115/225 (51%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +S G N+ Y AI + Q + +P Y +A RG AR + ++AI D+T+
Sbjct: 205 IDKYISLGNECFNKKDYKGAIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDDWTQ 264
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ NP+ + + RG A + LG++ AI D ++A+ PN RGI + D
Sbjct: 265 AIRINPNYADTYYSRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQ 324
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++D S + ++ AY G+A S +G+ + A + +AI ++ N +A+ H
Sbjct: 325 GAIDDYSQAININPNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYN 384
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L +++ A++ Q + I+ + AY RG++ LG + AI
Sbjct: 385 HYHLGDNQSAIDDFTQAIKINPNDADAYFNRGVIHSELGDKQGAI 429
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 115/213 (53%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+++ + AI D+T+AI NP+ +A+ RG AR LG+ AI D ++A+ PN AD +
Sbjct: 218 KKDYKGAIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDDWTQAIRINPNYADTYY 277
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ + + D +A++D + + ++ AY G+A S +G+ + A + + +AI ++
Sbjct: 278 SRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAIDDYSQAININ 337
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
N+ A+ + L + + A+ Q + I+ + AY RG + LG ++ AI D
Sbjct: 338 PNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYNHYHLGDNQSAIDD 397
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ + I+P++ + + R + +G+ + A+I
Sbjct: 398 FTQAIKINPNDADAYFNRGVIHSELGDKQGAII 430
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 7/168 (4%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D SRG+A G SAI + Q + +P Y A RG AR+ + + AI D+++A
Sbjct: 274 DTYYSRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAIDDYSQA 333
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I NP+ A+ RG AR+ LG+ AI D ++A+ PN AD RG ++ D +
Sbjct: 334 ININPNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYNHYHLGDNQS 393
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGE-------YKKAEEAHLK 542
A++D + +K++ + AY G+ S +G+ Y+KA + + K
Sbjct: 394 AIDDFTQAIKINPNDADAYFNRGVIHSELGDKQGAIINYRKAADIYKK 441
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 64/124 (51%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F KD+ A++D + + ++ AY GLA +G+ + A + +AI+++ N+ +
Sbjct: 216 FNKKDYKGAIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDDWTQAIRINPNYADT 275
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ + +L +++ A++ Q + I+ + AY RG+ LG + AI D S +
Sbjct: 276 YYSRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAIDDYSQAIN 335
Query: 614 IDPS 617
I+P+
Sbjct: 336 INPN 339
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 7/181 (3%)
Query: 325 SESYSKSSISDNKSS-DSTESRSKLSFKWDMLKETSNEAKR---NKKFCVTRISKSKSIS 380
S + S + DN+S+ D ++ +D+ A+ +K+ + S++ +I+
Sbjct: 278 SRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAIDDYSQAININ 337
Query: 381 VDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
++ L+ RGIA+ G AI+ + Q + +P +A RG + ++AI D
Sbjct: 338 PNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYNHYHLGDNQSAIDD 397
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
FT+AI+ NP+ +A+ RG + LG+ AI + KA + + + + FK
Sbjct: 398 FTQAIKINPNDADAYFNRGVIHSELGDKQGAIINYRKAADIYKKEGNETQYQNAIKQIFK 457
Query: 498 D 498
D
Sbjct: 458 D 458
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%)
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y LG + +YK A + +AI ++ N+ +A+ + L + + A++ Q +
Sbjct: 208 YISLGNECFNKKDYKGAIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDDWTQAIR 267
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
I+ ++ Y+ RGL LG ++ AI D + + I+P+
Sbjct: 268 INPNYADTYYSRGLAHSELGDNQSAIDDYTQAININPN 305
>gi|334117425|ref|ZP_08491516.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333460534|gb|EGK89142.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 673
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 124/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N GK +AI+ +D+ L+ P Y EA RG A LEAAI+ F +A++
Sbjct: 302 NRGIALGNLGKLEAAIASYDKALEIKPDYHEAWNNRGIALGNLGRLEAAITSFDKALEIK 361
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALEF+ + + + RG AA+
Sbjct: 362 PEYHEAWNNRGIALGNLGRWEEAIVSYDQALEFKADLYEAWNNRGSALGNLGRLEAAIAS 421
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G+AL ++G ++ A ++ KA+++ ++ W + +L
Sbjct: 422 YDKALEIKAYSYEAWYNRGIALDNLGRWEAAIASYDKALEIKPDYHVPWNNRGIALGNLG 481
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + L I +A++ RG+ L LG+ ++AI L I P Y R
Sbjct: 482 RLEEAIASFDKALEIKPDDDEAWYNRGIALGNLGRWEEAIASFDKALEIKPDYHVGWYNR 541
Query: 626 ASCYHAIGEYREAV 639
+ +G +EA+
Sbjct: 542 GNALGNLGRGKEAI 555
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 118/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA + G++ AI+ +D+ L+ P A RG A +LEAAI+ + +A++
Sbjct: 268 NRGIALGSLGRFEEAIASYDKALEFKPDEEYAWNNRGIALGNLGKLEAAIASYDKALEIK 327
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG AI KALE +P + + RGI + A+
Sbjct: 328 PDYHEAWNNRGIALGNLGRLEAAITSFDKALEIKPEYHEAWNNRGIALGNLGRWEEAIVS 387
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G AL ++G + A ++ KA+++ EAW + +L
Sbjct: 388 YDQALEFKADLYEAWNNRGSALGNLGRLEAAIASYDKALEIKAYSYEAWYNRGIALDNLG 447
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E A+ + L I + ++ RG+ L LG+ ++AI L I P + E Y R
Sbjct: 448 RWEAAIASYDKALEIKPDYHVPWNNRGIALGNLGRLEEAIASFDKALEIKPDDDEAWYNR 507
Query: 626 ASCYHAIGEYREAV 639
+G + EA+
Sbjct: 508 GIALGNLGRWEEAI 521
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 115/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ +AI+ FD+ L+ P Y EA RG A E AI + +A++
Sbjct: 336 NRGIALGNLGRLEAAITSFDKALEIKPEYHEAWNNRGIALGNLGRWEEAIVSYDQALEFK 395
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EAW RG A LG AI KALE + S + + RGI + AA+
Sbjct: 396 ADLYEAWNNRGSALGNLGRLEAAIASYDKALEIKAYSYEAWYNRGIALDNLGRWEAAIAS 455
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + + G+AL ++G ++A + KA+++ + EAW + +L
Sbjct: 456 YDKALEIKPDYHVPWNNRGIALGNLGRLEEAIASFDKALEIKPDDDEAWYNRGIALGNLG 515
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + L I + ++ RG L LG+ K+AI L P + Y R
Sbjct: 516 RWEEAIASFDKALEIKPDYHVGWYNRGNALGNLGRGKEAIASYDKALEFKPDDHAAWYYR 575
Query: 626 ASCYHAIGEYREAV 639
+G EA+
Sbjct: 576 GISLDDLGRGEEAI 589
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 14/294 (4%)
Query: 333 ISDNKSSDSTESRSKLSFKW---DMLKETSNEAKRNKKFCVTRI-------SKSKSISVD 382
+S +K ESR S +W D L T E KR + RI ++ +
Sbjct: 175 LSMDKELLQLESRQACSERWKQEDYLALTPQERKRE----LVRIQSLIDEDGQTPEQQAE 230
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+G+ + A AI+ FD+ L+ P A RG A E AI+ + +A+
Sbjct: 231 LFYEQGLLYGYAEESAKAIASFDKALEFKPDNHVAWYNRGIALGSLGRFEEAIASYDKAL 290
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P AW RG A LG+ AI KALE +P+ + + RGI AA
Sbjct: 291 EFKPDEEYAWNNRGIALGNLGKLEAAIASYDKALEIKPDYHEAWNNRGIALGNLGRLEAA 350
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ +++ E A+ G+AL ++G +++A ++ +A++ + EAW +
Sbjct: 351 ITSFDKALEIKPEYHEAWNNRGIALGNLGRWEEAIVSYDQALEFKADLYEAWNNRGSALG 410
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+L E A+ + L I +A++ RG+ L LG+ + AI L I P
Sbjct: 411 NLGRLEAAIASYDKALEIKAYSYEAWYNRGIALDNLGRWEAAIASYDKALEIKP 464
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T K+ I ++ + RGIA N G++ AI +DQ L+ EA RG+A
Sbjct: 350 AITSFDKALEIKPEYHEAWNNRGIALGNLGRWEEAIVSYDQALEFKADLYEAWNNRGSAL 409
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
LEAAI+ + +A++ + EAW RG A LG AI KALE +P+
Sbjct: 410 GNLGRLEAAIASYDKALEIKAYSYEAWYNRGIALDNLGRWEAAIASYDKALEIKPDYHVP 469
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI A+ +++ ++ A+ G+AL ++G +++A + KA++
Sbjct: 470 WNNRGIALGNLGRLEEAIASFDKALEIKPDDDEAWYNRGIALGNLGRWEEAIASFDKALE 529
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ ++ W + +L ++A+ + L A++ RG+ L LG+ ++AI
Sbjct: 530 IKPDYHVGWYNRGNALGNLGRGKEAIASYDKALEFKPDDHAAWYYRGISLDDLGRGEEAI 589
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L P + R +G EA+
Sbjct: 590 ASYDKALEFKPDDDAAWNNRGLALGNLGRLEEAI 623
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 103/237 (43%), Gaps = 4/237 (1%)
Query: 407 ILKEDPMYPEA----LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
++ ED PE +G + E AI+ F +A++ P AW RG A +L
Sbjct: 217 LIDEDGQTPEQQAELFYEQGLLYGYAEESAKAIASFDKALEFKPDNHVAWYNRGIALGSL 276
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G EAI KALEF+P+ + RGI AA+ +++ + A+
Sbjct: 277 GRFEEAIASYDKALEFKPDEEYAWNNRGIALGNLGKLEAAIASYDKALEIKPDYHEAWNN 336
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
G+AL ++G + A + KA+++ + EAW + +L E+A+ Q L
Sbjct: 337 RGIALGNLGRLEAAITSFDKALEIKPEYHEAWNNRGIALGNLGRWEEAIVSYDQALEFKA 396
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+A++ RG L LG+ + AI L I + E Y R +G + A+
Sbjct: 397 DLYEAWNNRGSALGNLGRLEAAIASYDKALEIKAYSYEAWYNRGIALDNLGRWEAAI 453
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+ +AI+ +D+ L+ EA RG A EAAI+ + +A++
Sbjct: 404 NRGSALGNLGRLEAAIASYDKALEIKAYSYEAWYNRGIALDNLGRWEAAIASYDKALEIK 463
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W RG A LG EAI KALE +P+ + + RGI + A+
Sbjct: 464 PDYHVPWNNRGIALGNLGRLEEAIASFDKALEIKPDDDEAWYNRGIALGNLGRWEEAIAS 523
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + + G AL ++G K+A ++ KA++ + AW + DL
Sbjct: 524 FDKALEIKPDYHVGWYNRGNALGNLGRGKEAIASYDKALEFKPDDHAAWYYRGISLDDLG 583
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
E+A+ + L A++ RGL L LG+ ++AI L P + Y
Sbjct: 584 RGEEAIASYDKALEFKPDDDAAWNNRGLALGNLGRLEEAIASYDKALEFKPDDDAAWY 641
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%)
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
T + +REL S E Q+ E + +G ES +AI KALEF+P++
Sbjct: 203 TPQERKRELVRIQSLIDEDGQTPEQQAELFYEQGLLYGYAEESAKAIASFDKALEFKPDN 262
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
+ RGI F A+ ++ + + A+ G+AL ++G+ + A ++ K
Sbjct: 263 HVAWYNRGIALGSLGRFEEAIASYDKALEFKPDEEYAWNNRGIALGNLGKLEAAIASYDK 322
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
A+++ ++ EAW + +L E A+ + L I + +A++ RG+ L LG+ +
Sbjct: 323 ALEIKPDYHEAWNNRGIALGNLGRLEAAITSFDKALEIKPEYHEAWNNRGIALGNLGRWE 382
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI L E R S +G A+
Sbjct: 383 EAIVSYDQALEFKADLYEAWNNRGSALGNLGRLEAAI 419
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 75/158 (47%)
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A++ +E+G++ ++ A+ ++ +N A+ G+AL S+G +++A ++ K
Sbjct: 229 AELFYEQGLLYGYAEESAKAIASFDKALEFKPDNHVAWYNRGIALGSLGRFEEAIASYDK 288
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
A++ + AW + +L E A+ + L I + +A++ RG+ L LG+ +
Sbjct: 289 ALEFKPDEEYAWNNRGIALGNLGKLEAAIASYDKALEIKPDYHEAWNNRGIALGNLGRLE 348
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
AI L I P E R +G + EA++
Sbjct: 349 AAITSFDKALEIKPEYHEAWNNRGIALGNLGRWEEAIV 386
>gi|408674917|ref|YP_006874665.1| Tetratricopeptide TPR_1 repeat-containing protein [Emticicia
oligotrophica DSM 17448]
gi|387856541|gb|AFK04638.1| Tetratricopeptide TPR_1 repeat-containing protein [Emticicia
oligotrophica DSM 17448]
Length = 448
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 136/290 (46%), Gaps = 41/290 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDP----MYPEALIGRGTARAFQRELEAAISDFTE 440
L RG+ + Y AI F ++++ +P MY +A RG ++ + + +I+DFT+
Sbjct: 132 LYRGMTRAKLLDYRRAIQDFTKVVELNPEDDKMY-QAFFSRGACKSRLEDYQGSITDFTK 190
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP +++ RG +R + + +I+D +A++ P ++ RG K +DF
Sbjct: 191 AIDMNPKRSQSFASRGFSRLKINDFAGSIKDFDEAVKLNPEDSESYFNRGFAKTKIEDFR 250
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD------------- 547
A+ D ++LD +N A+ G S +G K A KAI++D
Sbjct: 251 GAMNDYDKAIQLDPKNVRAFYGRGFCNSKLGNQKDATSDLTKAIEVDNMSIDSKVYYTGR 310
Query: 548 ---------RNFLEAWGHLTQFYQDLA--------------NSEKALECLQQVLYIDKRF 584
R+ ++ + +F +D + + + A+ L + + ++ +
Sbjct: 311 ITKKTLDELRSVVQEKSRINEFSEDRSEAYYSRGISKFKSGDGKGAILDLNKSIELNPTY 370
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++AY RGL+ +G K+A++D S+ + ++P E Y+R HA+G+
Sbjct: 371 AEAYFSRGLVRSSMGLQKEALQDCSNAIKLNPKYAEAYYVRGIIKHALGD 420
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 2/226 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG +++ +A +I FD+ +K +P E+ RG A+ + A++D+ +AIQ +
Sbjct: 204 SRGFSRLKINDFAGSIKDFDEAVKLNPEDSESYFNRGFAKTKIEDFRGAMNDYDKAIQLD 263
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDFNAAV 503
P A+ RG + LG +A DL+KA+E + S D + + I + + V
Sbjct: 264 PKNVRAFYGRGFCNSKLGNQKDATSDLTKAIEVDNMSIDSKVYYTGRITKKTLDELRSVV 323
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
++ S + ++ AY G++ G+ K A K+I+L+ + EA+
Sbjct: 324 QEKSRINEFSEDRSEAYYSRGISKFKSGDGKGAILDLNKSIELNPTYAEAYFSRGLVRSS 383
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ ++AL+ + ++ ++++AY++RG++ H LG DLS
Sbjct: 384 MGLQKEALQDCSNAIKLNPKYAEAYYVRGIIKHALGDENAGCYDLS 429
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 11/277 (3%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+T+++ ++ S F + G+ + G Y A + + +P + RG A+
Sbjct: 16 CITKVNAQQTASEYFEI--GVNKSKAGDYIGASQAYSTAIAMNPENAASYYNRGLAKQQL 73
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ AI DF I +P A+ RG++++ + A+QD ++ +E P A
Sbjct: 74 KDHRGAILDFDRTIDLDPKNALAYLYRGKSKSEQDDHRSALQDYNRTIELNPEDAMAYLY 133
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL---GLALSSIGEYKKAEEAHLKAIQ 545
RG+ K D+ A++D + V+L+ E+ Y G S + +Y+ + KAI
Sbjct: 134 RGMTRAKLLDYRRAIQDFTKVVELNPEDDKMYQAFFSRGACKSRLEDYQGSITDFTKAID 193
Query: 546 LDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
++ +++ G D A S K + + + ++ S++Y RG + +
Sbjct: 194 MNPKRSQSFASRGFSRLKINDFAGSIKDFD---EAVKLNPEDSESYFNRGFAKTKIEDFR 250
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A+ D + +DP N+ Y R C +G ++A
Sbjct: 251 GAMNDYDKAIQLDPKNVRAFYGRGFCNSKLGNQKDAT 287
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA RG ++ + + AI D ++I+ NP+ EA+ RG R+++G EA+QD S A
Sbjct: 338 EAYYSRGISKFKSGDGKGAILDLNKSIELNPTYAEAYFSRGLVRSSMGLQKEALQDCSNA 397
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++ P A+ + RGI+ D NA DLS +L
Sbjct: 398 IKLNPKYAEAYYVRGIIKHALGDENAGCYDLSRAGEL 434
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRGI++ G AI ++ ++ +P Y EA RG R+ + A+ D + AI+ N
Sbjct: 342 SRGISKFKSGDGKGAILDLNKSIELNPTYAEAYFSRGLVRSSMGLQKEALQDCSNAIKLN 401
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
P EA+ RG + ALG+ DLS+A E ++A
Sbjct: 402 PKYAEAYYVRGIIKHALGDENAGCYDLSRAGELGYSAA 439
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
S++++ +A++ L+ ++SY NR F +++E + + D DKA+QLDP ++A+
Sbjct: 218 SIKDFDEAVK-LNPEDSESY-----FNRGFAKTKIEDFRGAMNDYDKAIQLDPKNVRAFY 271
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G S LG +++A S K E
Sbjct: 272 GRGFCNSKLGNQKDATSDLTKAIE 295
>gi|145506301|ref|XP_001439116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406290|emb|CAK71719.1| unnamed protein product [Paramecium tetraurelia]
Length = 815
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 122/232 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G+ A+ F+ +K D Y +A I RG Q E E A+ D+ AI+ N
Sbjct: 181 NRGVVFKQKGEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLN 240
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG GE +A++D + A++F+ N D RG++ + + A++D
Sbjct: 241 PNYATAYYNRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKD 300
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL++ AY G+ +GE KKA + + +AI+L+ + + + + +L
Sbjct: 301 YNTAIKLNRNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELG 360
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+KAL+ + V+ ++ ++ AY RG+L G+ + A+KD + ++P+
Sbjct: 361 EKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLNPN 412
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 135/296 (45%), Gaps = 42/296 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G+ +A+ FD +K +P Y A RG Q ++E A++DF AI+ N
Sbjct: 385 NRGVLYGEQGEIENALKDFDMAIKLNPNYATAYQNRGVLFGEQGQIENALTDFDIAIKLN 444
Query: 446 PSAGEAWKRRGQ------------------------------ARAAL----GESVEAIQD 471
P+ A++ RG R + GE V+A+QD
Sbjct: 445 PTYASAYQNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYTRGLIFKQQGEKVQALQD 504
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KA++ N A + RG++ + + A++D + +KL+ +AY G+ G
Sbjct: 505 FDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQDFNMAIKLNPNYDTAYQNRGVLYKQQG 564
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQ--------FYQDLANSEKALECLQQVLYIDKR 583
E +KA + + AI+L+ N+ A+ + + Y+ EKAL+ + ++
Sbjct: 565 EKEKAFQDYNMAIKLNPNYATAYQNRGKQSSSRKGVLYKQQGEKEKALQDYHTAIKLNPN 624
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
F+ AY+ RG+L G+ +KA++D + + ++P+ R Y GE +A+
Sbjct: 625 FATAYYNRGVLFGEQGEKEKALQDYNEAIQLNPNYATAYMNRGVIYGEQGEIEKAL 680
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 2/247 (0%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+ A+ F+ +K +P A RG + E E A+ DF AI+ + + +A+
Sbjct: 155 QGQKDKALQNFNTAIKLNPNDATAYYNRGVVFKQKGEKEKALEDFNMAIKFDSNYIDAYI 214
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVEDLSACVKL 512
RG GE +A+ D + A++ PN A + RG+V FK K + A+ED + +K
Sbjct: 215 NRGVLFKQQGEKEKALHDYNLAIKLNPNYATAYYNRGVV-FKQKGEKQKALEDFNMAIKF 273
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
D AY G+ GE +KA + + AI+L+RN+ +A+ + ++ L ++KAL+
Sbjct: 274 DSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYINRGVLFKQLGETKKALQ 333
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
Q + ++ +++ Y+ RG+L LG+ +KA++D + + ++P+ R Y
Sbjct: 334 DYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQ 393
Query: 633 GEYREAV 639
GE A+
Sbjct: 394 GEIENAL 400
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 130/255 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RGI G++ A+ ++ +K +P +A G Q + + A+ +F AI+
Sbjct: 112 INRGILFKQLGEHEKALQDYNMAIKLNPNDADAFNNLGNLLDDQGQKDKALQNFNTAIKL 171
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG GE +A++D + A++F+ N D RG++ + + A+
Sbjct: 172 NPNDATAYYNRGVVFKQKGEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALH 231
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +KL+ +AY G+ GE +KA E AI+ D N+++A+ + ++
Sbjct: 232 DYNLAIKLNPNYATAYYNRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQ 291
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
EKAL+ + +++ ++ AY RG+L LG+ KKA++D + + ++P Y
Sbjct: 292 GEKEKALKDYNTAIKLNRNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYN 351
Query: 625 RASCYHAIGEYREAV 639
R + +GE ++A+
Sbjct: 352 RGVLFCELGEKQKAL 366
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G+ A+ F +++ +P Y A RG Q E+E A+ DF AI+ N
Sbjct: 351 NRGVLFCELGEKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLN 410
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A++ RG G+ A+ D A++ P A RG + K + + A++D
Sbjct: 411 PNYATAYQNRGVLFGEQGQIENALTDFDIAIKLNPTYASAYQNRGNLFDKKGEKDKALQD 470
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ AY GL GE +A + KAIQL+ N+ A+ + Y +
Sbjct: 471 YNMAIKLNPNYDIAYYTRGLIFKQQGEKVQALQDFDKAIQLNLNYATAYYNRGVLYGEQG 530
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
EKAL+ + ++ + AY RG+L G+ +KA +D + + ++P+
Sbjct: 531 EIEKALQDFNMAIKLNPNYDTAYQNRGVLYKQQGEKEKAFQDYNMAIKLNPN 582
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 129/262 (49%), Gaps = 8/262 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G+ A+ F+ +K +P Y A RG Q E E A D+ AI+ N
Sbjct: 521 NRGVLYGEQGEIEKALQDFNMAIKLNPNYDTAYQNRGVLYKQQGEKEKAFQDYNMAIKLN 580
Query: 446 PSAGEAWKRRGQ---ARAAL-----GESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
P+ A++ RG+ +R + GE +A+QD A++ PN A + RG++ +
Sbjct: 581 PNYATAYQNRGKQSSSRKGVLYKQQGEKEKALQDYHTAIKLNPNFATAYYNRGVLFGEQG 640
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A++D + ++L+ +AY G+ GE +KA + + KAI+ + + A+ +
Sbjct: 641 EKEKALQDYNEAIQLNPNYATAYMNRGVIYGEQGEIEKALQDYNKAIKQNPKYAAAYYNR 700
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ + E AL+ V++++ + AY RG L +G+ +KA++D + + ++P+
Sbjct: 701 GNLFDERGEKEDALKDYNIVIFLNPNDADAYINRGALFGEIGEKEKALQDFNQAIKLNPN 760
Query: 618 NIECLYLRASCYHAIGEYREAV 639
Y R GE +A+
Sbjct: 761 YATAYYNRGVLIRENGEKEKAL 782
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 2/255 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G+ AI ++ ++K + A I RG E E A+ D+ AI+ N
Sbjct: 79 NRGVLFGEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQDYNMAIKLN 138
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVE 504
P+ +A+ G G+ +A+Q+ + A++ PN A + RG+V FK K + A+E
Sbjct: 139 PNDADAFNNLGNLLDDQGQKDKALQNFNTAIKLNPNDATAYYNRGVV-FKQKGEKEKALE 197
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +K D AY G+ GE +KA + AI+L+ N+ A+ + ++
Sbjct: 198 DFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPNYATAYYNRGVVFKQK 257
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+KALE + D + AY RG+L G+ +KA+KD ++ + ++ + +
Sbjct: 258 GEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYIN 317
Query: 625 RASCYHAIGEYREAV 639
R + +GE ++A+
Sbjct: 318 RGVLFKQLGETKKAL 332
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 123/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G+ A+ F+ +K D Y +A I RG Q E E A+ D+ AI+ N
Sbjct: 249 NRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLN 308
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG LGE+ +A+QD ++A+ P A + RG++ + + A++D
Sbjct: 309 RNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQD 368
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ +AY G+ GE + A + AI+L+ N+ A+ + + +
Sbjct: 369 FKNVIRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLNPNYATAYQNRGVLFGEQG 428
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E AL + ++ ++ AY RG L G+ KA++D + + ++P+ Y R
Sbjct: 429 QIENALTDFDIAIKLNPTYASAYQNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYTR 488
Query: 626 ASCYHAIGEYREAV 639
+ GE +A+
Sbjct: 489 GLIFKQQGEKVQAL 502
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 115/221 (52%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+ RG Q E E A+ D+ +AI NP + A+ RG GE +A++D + A++
Sbjct: 10 LNRGVLFKQQGENEKALQDYNKAIILNPKSAIAYYNRGILFCEKGEKEKALKDYNMAIKL 69
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
PN + RG++ + + + A++D + +KL++ N +AY G+ +GE++KA +
Sbjct: 70 NPNYDIAYYNRGVLFGEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQ 129
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ AI+L+ N +A+ +L D +KAL+ + ++ + AY+ RG++
Sbjct: 130 DYNMAIKLNPNDADAFNNLGNLLDDQGQKDKALQNFNTAIKLNPNDATAYYNRGVVFKQK 189
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G+ +KA++D + + D + I+ R + GE +A+
Sbjct: 190 GEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKAL 230
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 120/265 (45%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K S +D ++RG+ +G+ A+ ++ +K + Y +A I RG E + A
Sbjct: 272 KFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYINRGVLFKQLGETKKA 331
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ D+ +AI+ NP + RG LGE +A+QD + PN A RG++
Sbjct: 332 LQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQDFKNVIRLNPNYATAYQNRGVLYG 391
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + A++D +KL+ +AY G+ G+ + A AI+L+ + A+
Sbjct: 392 EQGEIENALKDFDMAIKLNPNYATAYQNRGVLFGEQGQIENALTDFDIAIKLNPTYASAY 451
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + +KAL+ + ++ + AY+ RGL+ G+ +A++D + +
Sbjct: 452 QNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYTRGLIFKQQGEKVQALQDFDKAIQL 511
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
+ + Y R Y GE +A+
Sbjct: 512 NLNYATAYYNRGVLYGEQGEIEKAL 536
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 126/262 (48%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+++ D L+RG+ +G+ A+ +++ + +P A RG + E E A+ D
Sbjct: 3 TVNADECLNRGVLFKQQGENEKALQDYNKAIILNPKSAIAYYNRGILFCEKGEKEKALKD 62
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ AI+ NP+ A+ RG GE +AIQD + ++ N+ + RGI+ +
Sbjct: 63 YNMAIKLNPNYDIAYYNRGVLFGEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLG 122
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A++D + +KL+ + A+ LG L G+ KA + AI+L+ N A+ +
Sbjct: 123 EHEKALQDYNMAIKLNPNDADAFNNLGNLLDDQGQKDKALQNFNTAIKLNPNDATAYYNR 182
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++ EKALE + D + AY RG+L G+ +KA+ D + + ++P+
Sbjct: 183 GVVFKQKGEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPN 242
Query: 618 NIECLYLRASCYHAIGEYREAV 639
Y R + GE ++A+
Sbjct: 243 YATAYYNRGVVFKQKGEKQKAL 264
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 116/253 (45%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D ++RG+ G+ A+ ++Q ++ +P Y RG E + A+ DF
Sbjct: 313 DAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQDFKNV 372
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP+ A++ RG GE A++D A++ PN A RG++ +
Sbjct: 373 IRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLNPNYATAYQNRGVLFGEQGQIEN 432
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D +KL+ SAY G GE KA + + AI+L+ N+ A+ +
Sbjct: 433 ALTDFDIAIKLNPTYASAYQNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYTRGLIF 492
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ +AL+ + + ++ ++ AY+ RG+L G+ +KA++D + + ++P+
Sbjct: 493 KQQGEKVQALQDFDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQDFNMAIKLNPNYDTA 552
Query: 622 LYLRASCYHAIGE 634
R Y GE
Sbjct: 553 YQNRGVLYKQQGE 565
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ +G+ A+ + +K +P + A RG Q E E A+ D+ EAIQ NP
Sbjct: 598 KGVLYKQQGEKEKALQDYHTAIKLNPNFATAYYNRGVLFGEQGEKEKALQDYNEAIQLNP 657
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG GE +A+QD +KA++ P A + RG + + + A++D
Sbjct: 658 NYATAYMNRGVIYGEQGEIEKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKEDALKDY 717
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L+ + AY G IGE +KA + +AI+L+ N+ A+ + ++
Sbjct: 718 NIVIFLNPNDADAYINRGALFGEIGEKEKALQDFNQAIKLNPNYATAYYNRGVLIRENGE 777
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLL 595
EKAL+ + +++ +S AY+ RGL L
Sbjct: 778 KEKALQDYNMAIQLNRNYSTAYYNRGLSL 806
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 8/249 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF--------QRELEAAISD 437
+RG+ +G+ A ++ +K +P Y A RG + Q E E A+ D
Sbjct: 555 NRGVLYKQQGEKEKAFQDYNMAIKLNPNYATAYQNRGKQSSSRKGVLYKQQGEKEKALQD 614
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ AI+ NP+ A+ RG GE +A+QD ++A++ PN A RG++ +
Sbjct: 615 YHTAIKLNPNFATAYYNRGVLFGEQGEKEKALQDYNEAIQLNPNYATAYMNRGVIYGEQG 674
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A++D + +K + + +AY G GE + A + + I L+ N +A+ +
Sbjct: 675 EIEKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKEDALKDYNIVIFLNPNDADAYINR 734
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ ++ EKAL+ Q + ++ ++ AY+ RG+L+ G+ +KA++D + + ++ +
Sbjct: 735 GALFGEIGEKEKALQDFNQAIKLNPNYATAYYNRGVLIRENGEKEKALQDYNMAIQLNRN 794
Query: 618 NIECLYLRA 626
Y R
Sbjct: 795 YSTAYYNRG 803
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 79/146 (54%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+ +G+ A+ +++ +K++P Y A RG + E E A+ D+ I
Sbjct: 664 MNRGVIYGEQGEIEKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKEDALKDYNIVIFL 723
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ +A+ RG +GE +A+QD ++A++ PN A + RG++ + + A++
Sbjct: 724 NPNDADAYINRGALFGEIGEKEKALQDFNQAIKLNPNYATAYYNRGVLIRENGEKEKALQ 783
Query: 505 DLSACVKLDKENKSAYTYLGLALSSI 530
D + ++L++ +AY GL+L I
Sbjct: 784 DYNMAIQLNRNYSTAYYNRGLSLRYI 809
>gi|298492898|ref|YP_003723075.1| hypothetical protein Aazo_4774 ['Nostoc azollae' 0708]
gi|298234816|gb|ADI65952.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 371
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 8/268 (2%)
Query: 370 VTRISKSKSI---SVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
VT+I K+ + +++F L+ RG+A G SA++ ++ LK P + A R
Sbjct: 63 VTKILKNSAKLAGNINFYLAKAFHNRGLAAFQCGDDQSAVTDINEALKFYPEFIAAYSNR 122
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + AISD+ +AIQ NP A+ RG +R AL + AI D ++ALE PN
Sbjct: 123 GNILHILGKYTEAISDYNQAIQLNPHLAAAYHNRGNSRYALQDYQGAIADYNQALEINPN 182
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + RG+V +D+ A+ D + ++ D E+ AY GL ++ +Y+ A + +
Sbjct: 183 FGEAYYNRGLVMSHLQDYQGAIADFNQAIQQDPEDIQAYLERGLIYRTLQDYENAIQDYN 242
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+ +Q++ +G + N + A+ + ++L ++ + Y R + LG +
Sbjct: 243 QVLQINPTLPTVYGLRANARRHQKNHQGAIADINKLLQLNPHLVEGYCDRAVSRRFLGDY 302
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCY 629
A+ D + L I+P+ Y R Y
Sbjct: 303 NGALADYNRALQINPNLAAAYYARGEIY 330
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 116/245 (47%), Gaps = 25/245 (10%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
M E LI +G + + E AI+ F EAIQ N + EA+ RG + L E +AI D
Sbjct: 1 MNGEQLIKQGVQKNLYGDYEGAITVFNEAIQLNCNLAEAYYHRGYSCLELAEFNQAIADY 60
Query: 473 SKALEFEPNSADI-----------LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
+ + NSA + H RG+ F+ D +AV D++ +K E +AY+
Sbjct: 61 QQVTKILKNSAKLAGNINFYLAKAFHNRGLAAFQCGDDQSAVTDINEALKFYPEFIAAYS 120
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ------ 575
G L +G+Y +A + +AIQL+ HL Y + NS AL+ Q
Sbjct: 121 NRGNILHILGKYTEAISDYNQAIQLNP-------HLAAAYHNRGNSRYALQDYQGAIADY 173
Query: 576 -QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q L I+ F +AY+ RGL++ L ++ AI D + + DP +I+ R Y + +
Sbjct: 174 NQALEINPNFGEAYYNRGLVMSHLQDYQGAIADFNQAIQQDPEDIQAYLERGLIYRTLQD 233
Query: 635 YREAV 639
Y A+
Sbjct: 234 YENAI 238
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 2/225 (0%)
Query: 416 EALIGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
+A RG A AFQ + ++A++D EA++ P A+ RG LG+ EAI D ++
Sbjct: 83 KAFHNRGLA-AFQCGDDQSAVTDINEALKFYPEFIAAYSNRGNILHILGKYTEAISDYNQ 141
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A++ P+ A H RG + +D+ A+ D + ++++ AY GL +S + +Y+
Sbjct: 142 AIQLNPHLAAAYHNRGNSRYALQDYQGAIADYNQALEINPNFGEAYYNRGLVMSHLQDYQ 201
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
A +AIQ D ++A+ Y+ L + E A++ QVL I+ Y LR
Sbjct: 202 GAIADFNQAIQQDPEDIQAYLERGLIYRTLQDYENAIQDYNQVLQINPTLPTVYGLRANA 261
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
H+ AI D++ L ++P +E RA +G+Y A+
Sbjct: 262 RRHQKNHQGAIADINKLLQLNPHLVEGYCDRAVSRRFLGDYNGAL 306
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 14/174 (8%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQI 407
EA N+ ++ + + DF L RG+ Y +AI ++Q+
Sbjct: 185 EAYYNRGLVMSHLQDYQGAIADFNQAIQQDPEDIQAYLERGLIYRTLQDYENAIQDYNQV 244
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
L+ +P P R AR Q+ + AI+D + +Q NP E + R +R LG+
Sbjct: 245 LQINPTLPTVYGLRANARRHQKNHQGAIADINKLLQLNPHLVEGYCDRAVSRRFLGDYNG 304
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DKENKSAY 520
A+ D ++AL+ PN A + RG + F+D AA++D L D+E Y
Sbjct: 305 ALADYNRALQINPNLAAAYYARGEIYQHFRDIPAAIDDFQKSANLFDQEGNKLY 358
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 92/191 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++ Y AI+ ++Q L+ +P + EA RG + ++ + AI+DF +AIQ +
Sbjct: 155 NRGNSRYALQDYQGAIADYNQALEINPNFGEAYYNRGLVMSHLQDYQGAIADFNQAIQQD 214
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG L + AIQD ++ L+ P + R K+ A+ D
Sbjct: 215 PEDIQAYLERGLIYRTLQDYENAIQDYNQVLQINPTLPTVYGLRANARRHQKNHQGAIAD 274
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++L+ Y ++ +G+Y A + +A+Q++ N A+ + YQ
Sbjct: 275 INKLLQLNPHLVEGYCDRAVSRRFLGDYNGALADYNRALQINPNLAAAYYARGEIYQHFR 334
Query: 566 NSEKALECLQQ 576
+ A++ Q+
Sbjct: 335 DIPAAIDDFQK 345
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R A+ ++ + AI+ +++L+ +P E R +R F + A++D+ A+Q NP
Sbjct: 258 RANARRHQKNHQGAIADINKLLQLNPHLVEGYCDRAVSRRFLGDYNGALADYNRALQINP 317
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ A+ RG+ + AI D K+ + L+ + I+N
Sbjct: 318 NLAAAYYARGEIYQHFRDIPAAIDDFQKSANLFDQEGNKLYYQEIINL 365
>gi|340505014|gb|EGR31393.1| peptidase c14 caspase catalytic subunit p20, putative
[Ichthyophthirius multifiliis]
Length = 974
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 134/269 (49%), Gaps = 1/269 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+ I++ K IS D+ +G + +AI ++ L+ +P + +A+ RG A +E
Sbjct: 318 SHITEKKQIS-DWYHQQGFEARKNNELETAIQLYTIALQYNPQHFKAVFNRGFAFDKLKE 376
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI D+T+A++ + A+ RG + G+ AI+D +KA+ P +D H RG
Sbjct: 377 YDLAIKDYTKALEIENNNCYAYYNRGISYDRKGDFDYAIKDFTKAIALNPQKSDFYHNRG 436
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K FN A++D + ++ + ++ ++ + +G+++ AE +L+A+ L N
Sbjct: 437 FAWKKKGCFNEAIQDFTFSIQFENDHFKSFYNRAICYEKMGDFQLAENDYLQALSLQPNN 496
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+L L S +ALE + L ID + Y+ +GL+L +G+ ++A ++ S
Sbjct: 497 TSCINYLAALLDKLNRSIEALEYFNKSLKIDDKQPLVYNGKGLILDKMGKLEEAQQNFSQ 556
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +D N ++ R C + + EA+
Sbjct: 557 AIELDRQNPTYVHNRGCCLRSGDKLLEAI 585
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 134/637 (21%), Positives = 238/637 (37%), Gaps = 133/637 (20%)
Query: 85 HKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFL 144
+K I DCD L+LD + AY L+GCAF ++A+ D + L
Sbjct: 102 YKEAIIDCDTLLKLDKDNVGAYYLRGCAFEKQNLIDQAIE--------------DFTRVL 147
Query: 145 ELEELLTAAKQDRSVTCEY--DVSNSMSSLTV-----SESGLNANDKMSETSENHNKSDI 197
+L+E A R+ D + ++ + V SE LN + + +N SD
Sbjct: 148 KLDENHVNAAFARAACLNKIGDYNGAIDNYIVALEKDSEKSLNQTNNIKRAFKN---SDS 204
Query: 198 CDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGS 257
SQ+ + + S+ ++ + E K ++ +G + +++ + +
Sbjct: 205 SMKISQNNSLLNSQSQKGYELKTPLQQKSENKQQQNIKYYSNGFLL--EIQSSKQKYEEE 262
Query: 258 SDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSAS 317
S G + +D S+ ++++ D N + + + +Q TH L S
Sbjct: 263 SGGLMNPQNDKDNSQFCMINTNNID--NSYLFQQQKSNNTQKQAQNTHHQPKNLQHPSHI 320
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
K ISD W + EA++N + + +
Sbjct: 321 T----------EKKQISD----------------W--YHQQGFEARKNNE--LETAIQLY 350
Query: 378 SISVDFRLSRGIAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+I++ + A N G +Y AI + + L+ + A RG + + +
Sbjct: 351 TIALQYNPQHFKAVFNRGFAFDKLKEYDLAIKDYTKALEIENNNCYAYYNRGISYDRKGD 410
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI DFT+AI NP + + RG A G EAIQD + +++FE + + R
Sbjct: 411 FDYAIKDFTKAIALNPQKSDFYHNRGFAWKKKGCFNEAIQDFTFSIQFENDHFKSFYNRA 470
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL--------------------------- 523
I K DF A D + L N S YL
Sbjct: 471 ICYEKMGDFQLAENDYLQALSLQPNNTSCINYLAALLDKLNRSIEALEYFNKSLKIDDKQ 530
Query: 524 -------GLALSSIGEYKKAEEAHLKAIQLDRN-----------------FLEA------ 553
GL L +G+ ++A++ +AI+LDR LEA
Sbjct: 531 PLVYNGKGLILDKMGKLEEAQQNFSQAIELDRQNPTYVHNRGCCLRSGDKLLEAIKDFEN 590
Query: 554 -----------WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
+L ++ L E A++C + + I ++ + RG LG+
Sbjct: 591 ALKLDPNNTVILSNLGLVFRKLEQFENAIQCYNEEIRIGGENVRSLNNRGYSYAKLGKFN 650
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D S + + P N L+ R CY +G++++A+
Sbjct: 651 EAIQDYSQAVSLQPENTHALHNRGICYEKLGKFQKAI 687
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ F++ LK D P G+G +LE A +F++AI+ + RG
Sbjct: 516 ALEYFNKSLKIDDKQPLVYNGKGLILDKMGKLEEAQQNFSQAIELDRQNPTYVHNRGCCL 575
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ + +EAI+D AL+ +PN+ IL G+V K + F A++ + +++ EN +
Sbjct: 576 RSGDKLLEAIKDFENALKLDPNNTVILSNLGLVFRKLEQFENAIQCYNEEIRIGGENVRS 635
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
G + + +G++ +A + + +A+ L A + Y+ L +KA+E QV+
Sbjct: 636 LNNRGYSYAKLGKFNEAIQDYSQAVSLQPENTHALHNRGICYEKLGKFQKAIEDFSQVIK 695
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ + A+ RG LG+ +AI+D S L ID
Sbjct: 696 QNPLNANAFFNRGCCFDNLGKIDQAIQDYSKALEID 731
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + K AI F+ LK DP L G + E AI + E I+
Sbjct: 570 NRGCCLRSGDKLLEAIKDFENALKLDPNNTVILSNLGLVFRKLEQFENAIQCYNEEIRIG 629
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RG + A LG+ EAIQD S+A+ +P + LH RGI K F A+ED
Sbjct: 630 GENVRSLNNRGYSYAKLGKFNEAIQDYSQAVSLQPENTHALHNRGICYEKLGKFQKAIED 689
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
S +K + N +A+ G ++G+ +A + + KA+++D
Sbjct: 690 FSQVIKQNPLNANAFFNRGCCFDNLGKIDQAIQDYSKALEID 731
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 60/123 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
++ +AI +++ ++ +L RG + A + AI D+++A+ P A R
Sbjct: 614 QFENAIQCYNEEIRIGGENVRSLNNRGYSYAKLGKFNEAIQDYSQAVSLQPENTHALHNR 673
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G LG+ +AI+D S+ ++ P +A+ RG + A++D S +++D +
Sbjct: 674 GICYEKLGKFQKAIEDFSQVIKQNPLNANAFFNRGCCFDNLGKIDQAIQDYSKALEIDNK 733
Query: 516 NKS 518
+S
Sbjct: 734 QQS 736
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR CY +L + I D + ++ +P A+ +GC F LG+ ++A+ + K E
Sbjct: 672 NRGICYEKLGKFQKAIEDFSQVIKQNPLNANAFFNRGCCFDNLGKIDQAIQDYSKALE 729
>gi|443329566|ref|ZP_21058151.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
gi|442790904|gb|ELS00406.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
Length = 449
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 105/198 (53%), Gaps = 2/198 (1%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP P+ + G + Q++ AI +F +A+ SNP+ +A RG+A L + I+
Sbjct: 226 DP--PQDFVSVGRRKLNQKDYRGAIEEFNQALASNPNDLDALSGRGEAYYWLKDFPAVIK 283
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D L PN + L R + + + A+ D +++D +N S Y G++ S +
Sbjct: 284 DFDDVLRQNPNDSTFLWYRAYAHDELGKHHKAISDYDEAIRIDSDNASLYNSRGISYSKL 343
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
GEY KA + +A++LD NF+EA+ + Y +L +KA+ +V+ +D + + AY+
Sbjct: 344 GEYDKAIADYNEALRLDPNFVEAYNNRGSSYINLGEYDKAITDYSEVIRLDSQHANAYYG 403
Query: 591 RGLLLHGLGQHKKAIKDL 608
RG + LG +++A++D
Sbjct: 404 RGYIYQNLGDNQRAVQDF 421
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 5/215 (2%)
Query: 362 AKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
A RN T I + DF +S G ++N+ Y AI F+Q L +P +AL GR
Sbjct: 214 AARNNFAIPTNIDPPQ----DF-VSVGRRKLNQKDYRGAIEEFNQALASNPNDLDALSGR 268
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A + ++ A I DF + ++ NP+ R A LG+ +AI D +A+ + +
Sbjct: 269 GEAYYWLKDFPAVIKDFDDVLRQNPNDSTFLWYRAYAHDELGKHHKAISDYDEAIRIDSD 328
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+A + + RGI K +++ A+ D + ++LD AY G + ++GEY KA +
Sbjct: 329 NASLYNSRGISYSKLGEYDKAIADYNEALRLDPNFVEAYNNRGSSYINLGEYDKAITDYS 388
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ I+LD A+ YQ+L ++++A++ QQ
Sbjct: 389 EVIRLDSQHANAYYGRGYIYQNLGDNQRAVQDFQQ 423
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L K HK I + DE +R+DS AS +R I +KL ++ ++++A+R LD ++Y
Sbjct: 309 LGKHHKAISDYDEAIRIDSDNASLYNSRGISYSKLGEYDKAIADYNEALR-LDPNFVEAY 367
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR Y L + I D + ++LD AY +G + LG + A+
Sbjct: 368 N-----NRGSSYINLGEYDKAITDYSEVIRLDSQHANAYYGRGYIYQNLGDNQRAV---- 418
Query: 128 KGYEHALHQSADLKQ 142
Q+ADL Q
Sbjct: 419 ----QDFQQAADLYQ 429
>gi|296125246|ref|YP_003632498.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296017062|gb|ADG70299.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 349
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 126/241 (52%), Gaps = 4/241 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ N GKY A+ F+ LK D + +G + + AI D+T++I+ +
Sbjct: 42 RGLAKSNLGKYKEALDDFNTALKLDNNNADIYYNKGVTEYHMGDYDKAIEDYTKSIELDN 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S + + RG +ALG+ +AI+D + A+E + + RG+ +DF +A++D
Sbjct: 102 SIDDVYNNRGLCYSALGDFEKAIEDFTYAIELNNEDSQYYYNRGLAKDNLEDFESALDDY 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAE--EAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ + +AY G A + + Y + + + + KAI+LD N + A + +Y
Sbjct: 162 DKAIEINPKYSNAYNNRGNAKAELN-YDEEDIIKDYDKAIELDNNNINAHFNKALYYDIN 220
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
N E+AL Q+L ID+ + + Y R L+L+ L ++ ++IKD + +D S LYL
Sbjct: 221 ENYEQALNIYNQLLEIDEYYIEGYGNRALILYKLNKYDESIKDCDKAIELD-SKYWLLYL 279
Query: 625 R 625
Sbjct: 280 N 280
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 2/217 (0%)
Query: 425 RAFQRE-LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
AF E E AI + I N + RG A++ LG+ EA+ D + AL+ + N+A
Sbjct: 11 EAFDNEDYENAIEYCDKLIFYNGDNEGVYNYRGLAKSNLGKYKEALDDFNTALKLDNNNA 70
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
DI + +G+ + D++ A+ED + ++LD Y GL S++G+++KA E A
Sbjct: 71 DIYYNKGVTEYHMGDYDKAIEDYTKSIELDNSIDDVYNNRGLCYSALGDFEKAIEDFTYA 130
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG-QHK 602
I+L+ + + + +L + E AL+ + + I+ ++S AY+ RG L +
Sbjct: 131 IELNNEDSQYYYNRGLAKDNLEDFESALDDYDKAIEINPKYSNAYNNRGNAKAELNYDEE 190
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
IKD + +D +NI + +A Y Y +A+
Sbjct: 191 DIIKDYDKAIELDNNNINAHFNKALYYDINENYEQAL 227
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 50 RNWSKAIRILDSLL-AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYIL 108
N+ +A+ I + LL Y I+ NRA +L + I+DCDKA++LD Y+
Sbjct: 221 ENYEQALNIYNQLLEIDEYYIEGYGNRALILYKLNKYDESIKDCDKAIELDSKYWLLYLN 280
Query: 109 KGCAFSALGRK---------EEALSVWEKGYEHALHQSADLKQF 143
+ + +K +E +K YE AL +L +F
Sbjct: 281 RAEIKLEVAKKNIDDFKKLNDEVFEDIKKSYELALEDEDNLNEF 324
>gi|334116937|ref|ZP_08491029.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
gi|333461757|gb|EGK90362.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
Length = 804
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 12/307 (3%)
Query: 338 SSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKY 397
SSDS SR F W +L A F + S+ I G+ +
Sbjct: 373 SSDSFSSRLGSRFWWLILAGLG--AVIVLIFLFSYGSRPNPIKAKEYYELGVEKARNQDA 430
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
+A+ F++ ++ +P E+ RG A ++ + AI+D+++AI NP +A+ RG
Sbjct: 431 DAALQAFNKSIQLNPKNAESFYQRGNANYDLKKYQEAIADYSQAIALNPKYVQAYFNRGL 490
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
AR + AI+D ++AL +PN AD +ERGI + +D+ A++D +A ++L
Sbjct: 491 ARNDFNDKRGAIEDYTQALNLQPNDADTYYERGIAYLEQQDYKTAIQDFNAVIRLQPNLV 550
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
AY GLA + + + A + +AI++D ++A+ + L + + AL QV
Sbjct: 551 KAYHSRGLARAGSADLQGAIGDYTEAIKIDAKNVDAFYSRGRARFHLGDYQGALADYSQV 610
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID-----PSNIECLYLRASCYHAI 632
+ ID + + AY R LG H+ AI D + + + P N C+ Y +
Sbjct: 611 IAIDPKSADAYANRCSTQLNLGAHQAAIDDCTQAISLSDEDGVPYNNRCI-----AYLNL 665
Query: 633 GEYREAV 639
+Y +A+
Sbjct: 666 KDYPKAI 672
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RGIA + + Y +AI F+ +++ P +A RG ARA +L+ AI D+TEA
Sbjct: 517 DTYYERGIAYLEQQDYKTAIQDFNAVIRLQPNLVKAYHSRGLARAGSADLQGAIGDYTEA 576
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL--------------- 486
I+ + +A+ RG+AR LG+ A+ D S+ + +P SAD
Sbjct: 577 IKIDAKNVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQA 636
Query: 487 -------------------HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
+ R I KD+ A+ D + +K++ + +AY LA
Sbjct: 637 AIDDCTQAISLSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALAR 696
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
S+ G+ + A AI + N EA+ + + YQ+L N A+ Q + I ++ A
Sbjct: 697 STGGDPQGAIADFTAAIGFNPNNAEAYANRAKIYQELKNYNSAIADYVQAIRISPNYAAA 756
Query: 588 YHLRGLLLHGLGQHKKAIKDL 608
Y+ RG++ LG AI DL
Sbjct: 757 YYGRGIVRRSLGDKAGAISDL 777
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 120/287 (41%), Gaps = 34/287 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + KY AI+ + Q + +P Y +A RG AR + AI D+T+A+ P
Sbjct: 454 RGNANYDLKKYQEAIADYSQAIALNPKYVQAYFNRGLARNDFNDKRGAIEDYTQALNLQP 513
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + + RG A + AIQD + + +PN H RG+ D A+ D
Sbjct: 514 NDADTYYERGIAYLEQQDYKTAIQDFNAVIRLQPNLVKAYHSRGLARAGSADLQGAIGDY 573
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL--TQF---- 560
+ +K+D +N A+ G A +G+Y+ A + + I +D +A+ + TQ
Sbjct: 574 TEAIKIDAKNVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGA 633
Query: 561 ----------------------------YQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y +L + KA+ Q L ++ AY+ R
Sbjct: 634 HQAAIDDCTQAISLSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRA 693
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L G + AI D ++ +G +P+N E RA Y + Y A+
Sbjct: 694 LARSTGGDPQGAIADFTAAIGFNPNNAEAYANRAKIYQELKNYNSAI 740
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD SRG A+ + G Y A++ + Q++ DP +A R + + +AAI D T
Sbjct: 583 NVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQAAIDDCT 642
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI + G + R A L + +AI D ++AL+ PN + + R + D
Sbjct: 643 QAISLSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALARSTGGDP 702
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D +A + + N AY + Y A +++AI++ N+ A+
Sbjct: 703 QGAIADFTAAIGFNPNNAEAYANRAKIYQELKNYNSAIADYVQAIRISPNYAAAYYGRGI 762
Query: 560 FYQDLANSEKALECLQQV--LYIDKRFSKAY 588
+ L + A+ L++ +++D+ + Y
Sbjct: 763 VRRSLGDKAGAISDLEKAGKMFLDQGLTGGY 793
>gi|124024558|ref|YP_001018865.1| hypothetical protein P9303_28701 [Prochlorococcus marinus str. MIT
9303]
gi|123964844|gb|ABM79600.1| Hypothetical protein P9303_28701 [Prochlorococcus marinus str. MIT
9303]
Length = 582
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 118/233 (50%), Gaps = 8/233 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G Y AIS + + ++ DP + A RG ++ ++ +AAI+D+ +AI+ +
Sbjct: 333 NRGNAKHGLGDYQGAISDYTKAIELDPQHALAYDNRGYSKHDLKDYQAAIADYNKAIEID 392
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ L + AI D +KA+E +P A RGI D A+ D
Sbjct: 393 PQYAIAYNNRGTAKDDLKDYQGAIADYNKAIELDPQHAFAFSNRGITKRNLGDTQGAIAD 452
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQ 562
+ ++++ +N AY GLA S++G Y++A KAIQ+D + A+ G +
Sbjct: 453 YNKAIEINPQNAIAYNNRGLAKSNLGSYQEAIADCNKAIQIDPQYAGAYNSRGWIKYLQG 512
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL--SSGLG 613
D + AL+ + L I RGL H LGQ + A KDL +S LG
Sbjct: 513 DF---QGALKDANKALAIAPNDGATLDTRGLAKHALGQDRSACKDLKRASSLG 562
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 126/242 (52%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ + + L+ +P RG A+ + + AISD+T+AI+ +P A+ RG
Sbjct: 310 YQGAIADYSKALEINPEDANTFNNRGNAKHGLGDYQGAISDYTKAIELDPQHALAYDNRG 369
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
++ L + AI D +KA+E +P A + RG KD+ A+ D + ++LD ++
Sbjct: 370 YSKHDLKDYQAAIADYNKAIEIDPQYAIAYNNRGTAKDDLKDYQGAIADYNKAIELDPQH 429
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A++ G+ ++G+ + A + KAI+++ A+ + +L + ++A+ +
Sbjct: 430 AFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRGLAKSNLGSYQEAIADCNK 489
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ ID +++ AY+ RG + + G + A+KD + L I P++ L R HA+G+ R
Sbjct: 490 AIQIDPQYAGAYNSRGWIKYLQGDFQGALKDANKALAIAPNDGATLDTRGLAKHALGQDR 549
Query: 637 EA 638
A
Sbjct: 550 SA 551
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 112/219 (51%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R A+ ++ + AI+D+++A++ NP + RG A+ LG+ AI D +KA+E +P
Sbjct: 300 RAYAKKKLKDYQGAIADYSKALEINPEDANTFNNRGNAKHGLGDYQGAISDYTKAIELDP 359
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A RG KD+ AA+ D + +++D + AY G A + +Y+ A +
Sbjct: 360 QHALAYDNRGYSKHDLKDYQAAIADYNKAIEIDPQYAIAYNNRGTAKDDLKDYQGAIADY 419
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI+LD A+ + ++L +++ A+ + + I+ + + AY+ RGL LG
Sbjct: 420 NKAIELDPQHAFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRGLAKSNLGS 479
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+++AI D + + IDP R + G+++ A+
Sbjct: 480 YQEAIADCNKAIQIDPQYAGAYNSRGWIKYLQGDFQGAL 518
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 92/193 (47%)
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S+G + R A+ L + AI D SKALE P A+ + RG D+ A+ D
Sbjct: 292 SSGGGYFLRAYAKKKLKDYQGAIADYSKALEINPEDANTFNNRGNAKHGLGDYQGAISDY 351
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD ++ AY G + + +Y+ A + KAI++D + A+ + DL +
Sbjct: 352 TKAIELDPQHALAYDNRGYSKHDLKDYQAAIADYNKAIEIDPQYAIAYNNRGTAKDDLKD 411
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ A+ + + +D + + A+ RG+ LG + AI D + + I+P N R
Sbjct: 412 YQGAIADYNKAIELDPQHAFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRG 471
Query: 627 SCYHAIGEYREAV 639
+G Y+EA+
Sbjct: 472 LAKSNLGSYQEAI 484
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 376 SKSISVD----FRLS-RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D F S RGI + N G AI+ +++ ++ +P A RG A++
Sbjct: 420 NKAIELDPQHAFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRGLAKSNLGS 479
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D +AIQ +P A+ RG + G+ A++D +KAL PN L RG
Sbjct: 480 YQEAIADCNKAIQIDPQYAGAYNSRGWIKYLQGDFQGALKDANKALAIAPNDGATLDTRG 539
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ +A +DL L + S Y
Sbjct: 540 LAKHALGQDRSACKDLKRASSLGYQGTSQY 569
>gi|220915045|ref|YP_002490353.1| hypothetical protein [Methylobacterium nodulans ORS 2060]
gi|219952796|gb|ACL63186.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
Length = 392
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 34/290 (11%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RGI +Y AI+ +++ ++ +P A +GRG+ +RE + A++D+ +AI+
Sbjct: 30 LNRGITYYGNREYEQAIADYNEAIRIEPGLALAYLGRGSVYESRREYDQAMADYNKAIRI 89
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL----------HE------ 488
+P A+ RG + GE AI D S A+ +P D HE
Sbjct: 90 DPKYAIAYNYRGNVYVSKGEYDRAIADYSMAIRIDPEYTDAYDNRGYIYQNKHEYDRAIA 149
Query: 489 ------------------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
RG++ + +++ A+ D ++++ +KSAY GLA
Sbjct: 150 DYNEAIRINPELVSAYFNRGLIYYNMGNYDLAIADYGNAIRIEPNHKSAYNNRGLAYFGK 209
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
GEY +A + +AI++D ++ A+ + + + +KAL + V+ +D AY
Sbjct: 210 GEYDRAISDYDEAIRIDPSYTSAYINRANLNDIIGDIDKALIDYKNVILLDLNHEIAYIN 269
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
R L+ + AI D ++ + I P + ++R Y+ EY A +
Sbjct: 270 RALIYQNKNNYDLAITDCNNAIRIKPKHANSYFIRGGIYYDKTEYDRAAV 319
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 3/259 (1%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
RI +I+ ++R G V++G+Y AI+ + ++ DP Y +A RG + E
Sbjct: 87 IRIDPKYAIAYNYR---GNVYVSKGEYDRAIADYSMAIRIDPEYTDAYDNRGYIYQNKHE 143
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+ EAI+ NP A+ RG +G AI D A+ EPN + RG
Sbjct: 144 YDRAIADYNEAIRINPELVSAYFNRGLIYYNMGNYDLAIADYGNAIRIEPNHKSAYNNRG 203
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ F +++ A+ D +++D SAY IG+ KA + I LD N
Sbjct: 204 LAYFGKGEYDRAISDYDEAIRIDPSYTSAYINRANLNDIIGDIDKALIDYKNVILLDLNH 263
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + YQ+ N + A+ + I + + +Y +RG + + ++ +A D S
Sbjct: 264 EIAYINRALIYQNKNNYDLAITDCNNAIRIKPKHANSYFIRGGIYYDKTEYDRAAVDYSE 323
Query: 611 GLGIDPSNIECLYLRASCY 629
+ IDP + R Y
Sbjct: 324 AIRIDPKYALAYFNRGLAY 342
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 522 YLGLALSSIG--EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
YL ++ G EY++A + +AI+++ A+ Y+ ++A+ + +
Sbjct: 29 YLNRGITYYGNREYEQAIADYNEAIRIEPGLALAYLGRGSVYESRREYDQAMADYNKAIR 88
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH-------AI 632
ID +++ AY+ RG + G++ +AI D S + IDP + R Y AI
Sbjct: 89 IDPKYAIAYNYRGNVYVSKGEYDRAIADYSMAIRIDPEYTDAYDNRGYIYQNKHEYDRAI 148
Query: 633 GEYREAV 639
+Y EA+
Sbjct: 149 ADYNEAI 155
>gi|326915587|ref|XP_003204096.1| PREDICTED: tetratricopeptide repeat protein 13-like [Meleagris
gallopavo]
Length = 685
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 116/222 (52%), Gaps = 6/222 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
+ G Y AI F +L+E+P A+ GRG A + + E A+ + + I P
Sbjct: 71 IGNGLYDEAIRQFSTMLQEEPELVSAIYGRGIAYGKKGLHDMKNAELALFELSRVISLEP 130
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +++R + + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED
Sbjct: 131 DHPEVFEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 189
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+K A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N
Sbjct: 190 QHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGN 249
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A E Q+ L +++ + L+G++L+ G +A+K+
Sbjct: 250 FDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNF 291
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG YA+A F L+ + P A++ +G + L+ AI F EA++
Sbjct: 172 RGTLYFISEDYATAHEDFQHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKA 231
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+K GQA LG A + KAL N L +G++ + + A+++
Sbjct: 232 DFIDAYKSLGQAYRELGNFDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNF 291
Query: 507 SACV 510
C+
Sbjct: 292 KVCL 295
>gi|304315338|ref|YP_003850485.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
gi|302588797|gb|ADL59172.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
Length = 386
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 126/257 (49%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ LS G + + +GKY A+ F + LK P PE L + E A+ + + +
Sbjct: 18 WHLSGGRSSLKQGKYKEALKEFRKALKASPNDPEILHYNAMTLLKLKRPEKALECYEKIL 77
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
++NP EAW +G L EA++ +AL+ +P + +G + A
Sbjct: 78 KNNPKLAEAWNNKGVVLKELKRYDEALECYERALQIDPEDDGTWNNKGALLDTIGKPEKA 137
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E ++++++N A+ G L S+G+Y++A E + KA+Q++ F+EAW + +
Sbjct: 138 IECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALILE 197
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+L ++ALEC ++ L ID ++ +G LL +G+ +KAI+ L I+ N +
Sbjct: 198 ELKRYDEALECYERALQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAW 257
Query: 623 YLRASCYHAIGEYREAV 639
+ + Y EA+
Sbjct: 258 NNKGVVLEELKRYDEAL 274
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 125/248 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I K+ + ++G+ +Y A+ +++ L+ DP +G
Sbjct: 72 CYEKILKNNPKLAEAWNNKGVVLKELKRYDEALECYERALQIDPEDDGTWNNKGALLDTI 131
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ E AI + +A++ N +AW +G +LG+ EA++ KAL+ + +
Sbjct: 132 GKPEKAIECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYN 191
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ ++ + K ++ A+E +++D E+ + G L +IG+ +KA E + KA+++++
Sbjct: 192 KALILEELKRYDEALECYERALQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALEINQ 251
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+AW + ++L ++ALEC ++ L I+ + + +G+LL LG++++A++
Sbjct: 252 KNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECF 311
Query: 609 SSGLGIDP 616
L I+P
Sbjct: 312 EKALEINP 319
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 95/187 (50%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY A+ +++ L+ + + EA + + + A+ + A+Q +P W
Sbjct: 166 GKYEEALECYEKALQINAEFVEAWYNKALILEELKRYDEALECYERALQIDPEDDGTWNN 225
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G +G+ +AI+ KALE +A + +G+V + K ++ A+E ++++
Sbjct: 226 KGALLDTIGKPEKAIECYEKALEINQKNAKAWNNKGVVLEELKRYDEALECYEKALEINL 285
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G+ L +G+Y++A E KA++++ F +AW +DL E+AL+C
Sbjct: 286 ENDETWANKGVLLRKLGKYEEALECFEKALEINPEFADAWKWKGIILEDLKKPEEALKCH 345
Query: 575 QQVLYID 581
+Q L ++
Sbjct: 346 KQALKLN 352
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 106/223 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK AI +++ L+ + +A +G + E A+ + +A+Q N EAW
Sbjct: 132 GKPEKAIECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYN 191
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L EA++ +AL+ +P + +G + A+E +++++
Sbjct: 192 KALILEELKRYDEALECYERALQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALEINQ 251
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N A+ G+ L + Y +A E + KA++++ E W + + L E+ALEC
Sbjct: 252 KNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECF 311
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++ L I+ F+ A+ +G++L L + ++A+K L ++P
Sbjct: 312 EKALEINPEFADAWKWKGIILEDLKKPEEALKCHKQALKLNPP 354
>gi|218246150|ref|YP_002371521.1| hypothetical protein PCC8801_1300 [Cyanothece sp. PCC 8801]
gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
Length = 878
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 127/246 (51%), Gaps = 2/246 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
S+SI F+ R ++ GKY A +IF ++++ DP +A G A +Q +L+ AI
Sbjct: 26 SQSIDQLFQQGRTAGKM--GKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAI 83
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+ + +AIQ NP+ +A+ G A + G+ EAI KA++ PN AD + GI
Sbjct: 84 AAYQKAIQLNPNDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIALSD 143
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
A+ ++L+ AY LG+ALS G+ ++A A+ KAIQL+ N+ +A+
Sbjct: 144 QGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYY 203
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+L D ++A+ Q+ + +D + AY+ G L+ G+ ++AI + ++
Sbjct: 204 NLGNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLN 263
Query: 616 PSNIEC 621
P+ E
Sbjct: 264 PNLAEA 269
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 122/236 (51%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + GIA ++GK AI+ + + ++ +P + +A G A + Q +LE AI+ + +A
Sbjct: 132 DAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKA 191
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ +A+ G A G+ EAI KA++ +PN A+ + G +K
Sbjct: 192 IQLNPNYADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEE 251
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ ++L+ AY LG+ALS G+ +A A+ KAIQL+ N EA+ +L
Sbjct: 252 AIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNLAEAYNNLGVAL 311
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
D ++A+ Q+ + ++ F+ AY+ G+ L G+ +AI + ++P+
Sbjct: 312 SDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN 367
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 120/230 (52%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A ++GK AI+ + + ++ +P Y +A G A + Q +LE AI+ + +AIQ NP+
Sbjct: 104 GNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIALSDQGKLEEAIAAYQKAIQLNPN 163
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G A + G+ EAI KA++ PN AD + G F + A+
Sbjct: 164 FTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEAIAAYQ 223
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD + +AY LG AL G+ ++A A+ KAIQL+ N EA+ +L D
Sbjct: 224 KAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKR 283
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++A+ Q+ + ++ ++AY+ G+ L G+ +AI + ++P+
Sbjct: 284 DEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN 333
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 125/252 (49%), Gaps = 7/252 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + G A ++GK AI+ + + ++ DP A G A Q +LE AI+ + +A
Sbjct: 200 DAYYNLGNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKA 259
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ NP+ EA+ G A + G+ EAI KA++ PN A+ + G+ +
Sbjct: 260 IQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDE 319
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ ++L+ AY LG+ALS G+ +A A+ KAIQL+ NF A+ +L
Sbjct: 320 AIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVAL 379
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
D ++A+ Q+ + ++ F+ AY+ G+ L G+ +AI + +DP++
Sbjct: 380 SDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDPND--- 436
Query: 622 LYLRASCYHAIG 633
A+ Y+ +G
Sbjct: 437 ----ANAYNNLG 444
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 117/230 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA ++GK AI+ + + ++ +P Y +A G A Q +L+ AI+ + +AIQ +P+
Sbjct: 172 GIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPN 231
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A G+ EAI KA++ PN A+ + G+ + A+
Sbjct: 232 DANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQ 291
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY LG+ALS G+ +A A+ KAIQL+ NF A+ +L D
Sbjct: 292 KAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKR 351
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++A+ Q+ + ++ F+ AY+ G+ L G+ +AI + ++P+
Sbjct: 352 DEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN 401
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 7/259 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A +GK AI+ + + ++ +P EA G A + Q + + AI+ + +AIQ NP+
Sbjct: 240 GAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN 299
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+ G A + G+ EAI KA++ PN A + G+ + A+
Sbjct: 300 LAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQ 359
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY LG+ALS G+ +A A+ KAIQL+ NF A+ +L ++
Sbjct: 360 KAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALRNQGKR 419
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP------SNI-E 620
++A+ Q+ + +D + AY+ GL L G+ +AI + ++P +N+
Sbjct: 420 DEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGN 479
Query: 621 CLYLRASCYHAIGEYREAV 639
LY + AI Y++A+
Sbjct: 480 ALYSQGKREEAIAAYQKAI 498
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 131/264 (49%), Gaps = 9/264 (3%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPM 413
S++ KR++ + K+I ++ L+ G+A ++GK AI+ + + ++ +P
Sbjct: 278 SDQGKRDEAIAAYQ----KAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN 333
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ A G A + Q + + AI+ + +AIQ NP+ A+ G A + G+ EAI
Sbjct: 334 FALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQ 393
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
KA++ PN A + G+ + A+ ++LD + +AY LGLAL + G+
Sbjct: 394 KAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKR 453
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+A A+ KAIQL+ NF A+ +L E+A+ Q+ + ++ F+ AY+ G
Sbjct: 454 DEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLGN 513
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPS 617
L G+ +AI + ++P+
Sbjct: 514 ALSDQGKRDEAIAAYQKAIQLNPN 537
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 132/262 (50%), Gaps = 5/262 (1%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYP 415
S++ KR++ + K+ ++ +F L+ G+A ++GK AI+ + + ++ +P +
Sbjct: 312 SDQGKRDE--AIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFA 369
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A G A + Q + + AI+ + +AIQ NP+ A+ G A G+ EAI KA
Sbjct: 370 LAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKA 429
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ +PN A+ + G+ + A+ ++L+ AY LG AL S G+ ++
Sbjct: 430 IQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREE 489
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A A+ KAIQL+ NF A+ +L D ++A+ Q+ + ++ F+ AY+ G L
Sbjct: 490 AIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNAL 549
Query: 596 HGLGQHKKAIKDLSSGLGIDPS 617
G+ +AI + ++P+
Sbjct: 550 SDQGKLNEAIATYQKAIQLNPN 571
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A ++GK AI+ + + ++ +P EA G A + Q + + AI+ + +AIQ NP+
Sbjct: 274 GVALSDQGKRDEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN 333
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A + G+ EAI KA++ PN A + G+ + A+
Sbjct: 334 FALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQ 393
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY LG+AL + G+ +A A+ KAIQLD N A+ +L ++
Sbjct: 394 KAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKR 453
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++A+ Q+ + ++ F+ AY+ G L+ G+ ++AI + ++P+
Sbjct: 454 DEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPN 503
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 129/269 (47%), Gaps = 13/269 (4%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYP 415
S++ KR++ + K+ ++ +F L+ G+A N+GK AI+ + + ++ DP
Sbjct: 380 SDQGKRDE--AIAAYQKAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDA 437
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A G A Q + + AI+ + +AIQ NP+ A+ G A + G+ EAI KA
Sbjct: 438 NAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKA 497
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN A + G + A+ ++L+ AY LG ALS G+ +
Sbjct: 498 IQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNE 557
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK--------A 587
A + KAIQL+ NF A+ +L +D +A+ Q+ L + + S A
Sbjct: 558 AIATYQKAIQLNPNFALAYNNLGNALKDQGKLNEAIAAYQKALSLPEDTSVTPTTAHTLA 617
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++ GL+ G+ ++A+++ + L IDP
Sbjct: 618 HNNLGLVYQPQGKLEEALREYEAALKIDP 646
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 5/250 (2%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYP 415
S++ KR++ + K+ ++ +F L+ G+A ++GK AI+ + + ++ +P +
Sbjct: 346 SDQGKRDE--AIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFA 403
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A G A Q + + AI+ + +AIQ +P+ A+ G A G+ EAI KA
Sbjct: 404 LAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKA 463
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN A + G + A+ ++L+ AY LG ALS G+ +
Sbjct: 464 IQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDE 523
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A A+ KAIQL+ NF A+ +L D +A+ Q+ + ++ F+ AY+ G L
Sbjct: 524 AIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPNFALAYNNLGNAL 583
Query: 596 HGLGQHKKAI 605
G+ +AI
Sbjct: 584 KDQGKLNEAI 593
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 93/186 (50%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++G+ +G+ EA + +E +PN AD + G + + A+ ++L+
Sbjct: 34 QQGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLN 93
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ AY LG ALS G+ ++A A+ KAIQL+ N+ +A+ +L D E+A+
Sbjct: 94 PNDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIALSDQGKLEEAIAA 153
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
Q+ + ++ F++AY+ G+ L G+ ++AI + ++P+ + Y + G
Sbjct: 154 YQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQG 213
Query: 634 EYREAV 639
+ EA+
Sbjct: 214 KLDEAI 219
>gi|159028674|emb|CAO88145.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 837
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 115/244 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +D+ L+ P Y EA RG A LE AI+ + A++ P EAW R
Sbjct: 487 QYQEAIASYDRALEIKPDYHEAWYNRGIALDDLGRLEEAIASYDRALEIKPDKHEAWYNR 546
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG +AI +ALE +P+ + + RG F A+ +++ +
Sbjct: 547 GFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPD 606
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G AL ++G +++A ++ +A+++ + EAW + DL E+A+
Sbjct: 607 KHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALDDLGRLEEAIASFD 666
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ L I +A++ RG L LG+ ++AI L I P E Y R +G +
Sbjct: 667 RALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRF 726
Query: 636 REAV 639
+A+
Sbjct: 727 EQAI 730
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 124/251 (49%), Gaps = 14/251 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D+ L+ P EA RG A E AI+ + A++
Sbjct: 545 NRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIK 604
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG +AI +ALE +P+ + + RGI A+
Sbjct: 605 PDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALDDLGRLEEAIAS 664
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
+++ + A+ G AL ++G +++A ++ +A+++ + EAW G+L
Sbjct: 665 FDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLG 724
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+F Q +A+ ++ALE I +A++ RG+ L LG+ ++AI + I+ ++
Sbjct: 725 RFEQAIASYDRALE-------IKPDDHEAWNNRGIALGNLGRFEEAIASFDRAIKINSND 777
Query: 619 IECLYLRASCY 629
+ Y +A CY
Sbjct: 778 ADAYYNKACCY 788
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 14/251 (5%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ F++++ P + + RGT + + + AI+ + A++ P EAW R
Sbjct: 453 RYQDALKGFNRLVSFAPQWEDGWFYRGTTFGYLEQYQEAIASYDRALEIKPDYHEAWYNR 512
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG EAI +ALE +P+ + + RG F A+ +++ +
Sbjct: 513 GIALDDLGRLEEAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPD 572
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSE 568
A+ G AL ++G +++A ++ +A+++ + EAW G+L +F Q +A+ +
Sbjct: 573 KHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYD 632
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
+ALE I +A++ RG+ L LG+ ++AI L I P E Y R
Sbjct: 633 RALE-------IKPDDHEAWNNRGIALDDLGRLEEAIASFDRALEIKPDKHEAWYNRGFA 685
Query: 629 YHAIGEYREAV 639
+G + +A+
Sbjct: 686 LGNLGRFEQAI 696
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 14/261 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA + G+ AI+ +D+ L+ P EA RG A E AI+ + A++
Sbjct: 511 NRGIALDDLGRLEEAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIK 570
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG +AI +ALE +P+ + + RG F A+
Sbjct: 571 PDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIAS 630
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
+++ ++ A+ G+AL +G ++A + +A+++ + EAW G+L
Sbjct: 631 YDRALEIKPDDHEAWNNRGIALDDLGRLEEAIASFDRALEIKPDKHEAWYNRGFALGNLG 690
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+F Q +A+ ++ALE I +A++ RG L LG+ ++AI L I P +
Sbjct: 691 RFEQAIASYDRALE-------IKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDD 743
Query: 619 IECLYLRASCYHAIGEYREAV 639
E R +G + EA+
Sbjct: 744 HEAWNNRGIALGNLGRFEEAI 764
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D+ L+ P EA RG A LE AI+ F A++
Sbjct: 613 NRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALDDLGRLEEAIASFDRALEIK 672
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG +AI +ALE +P+ + + RG F A+
Sbjct: 673 PDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIAS 732
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ ++ A+ G+AL ++G +++A + +AI+++ N +A+ + Y
Sbjct: 733 YDRALEIKPDDHEAWNNRGIALGNLGRFEEAIASFDRAIKINSNDADAYYNKACCYGLQN 792
Query: 566 NSEKALECLQQVLYIDKRF 584
N E A+E LQ+ + +D ++
Sbjct: 793 NVELAIENLQRAINLDVKY 811
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 45 KLCSLRNWSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLL 103
KL L+ + A++ + L++ + + +D R + LE ++ I D+AL++ P
Sbjct: 447 KLYELKRYQDALKGFNRLVSFAPQWEDGWFYRGTTFGYLEQYQEAIASYDRALEIKPDYH 506
Query: 104 QAYILKGCAFSALGRKEEALSVWEKGYE 131
+A+ +G A LGR EEA++ +++ E
Sbjct: 507 EAWYNRGIALDDLGRLEEAIASYDRALE 534
>gi|406912627|gb|EKD52197.1| peptidase C14 caspase catalytic subunit P20 [uncultured bacterium]
Length = 714
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 114/231 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G + AIS F Q LK D RGTA ++ E AI+DF +AI+ N
Sbjct: 363 NRGKAWFKTGHFDEAISDFTQALKIDEHDANTYYDRGTAWLEKKNYEQAITDFNKAIEEN 422
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG+A A + +A++D SKA++ P + RG + ++ A+ D
Sbjct: 423 PNLDIAFYNRGRAWKAKQDITKALEDYSKAIDINPIFESAYNNRGNLYLGNGFYDKAIAD 482
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++++ AY+ GLA S +GEY KA E + KA+ ++ + + A+ + + +
Sbjct: 483 FSKLIEINPSRSDAYSNRGLAWSGVGEYSKAIEDYDKALLIEPSNIHAYVNRGVAWVHMG 542
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
KA + + L I+ FS AY R L G A+ D++ + P
Sbjct: 543 EIHKAFDDYNKALQINPNFSHAYANRANLFLQTGNLNSAMTDIAFAMNSKP 593
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 121/255 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A G A+ + L D +A G A + + E AI ++ AI+
Sbjct: 294 VNRGYAWQAGGDVDRALDAYAIALMLDSKNEDAYFNSGNAWSDKGNFEKAIGAYSNAIEF 353
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P + + RG+A G EAI D ++AL+ + + A+ ++RG + K++ A+
Sbjct: 354 DPQNHKLYANRGKAWFKTGHFDEAISDFTQALKIDEHDANTYYDRGTAWLEKKNYEQAIT 413
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++ + A+ G A + + KA E + KAI ++ F A+ + Y
Sbjct: 414 DFNKAIEENPNLDIAFYNRGRAWKAKQDITKALEDYSKAIDINPIFESAYNNRGNLYLGN 473
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+KA+ +++ I+ S AY RGL G+G++ KAI+D L I+PSNI
Sbjct: 474 GFYDKAIADFSKLIEINPSRSDAYSNRGLAWSGVGEYSKAIEDYDKALLIEPSNIHAYVN 533
Query: 625 RASCYHAIGEYREAV 639
R + +GE +A
Sbjct: 534 RGVAWVHMGEIHKAF 548
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%)
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
IL Y + RG A +++ A+ + A+ + +A+ G A + G
Sbjct: 282 ILTLRQYYSSDYVNRGYAWQAGGDVDRALDAYAIALMLDSKNEDAYFNSGNAWSDKGNFE 341
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
+AI S A+EF+P + + RG FK F+ A+ D + +K+D+ + + Y G A
Sbjct: 342 KAIGAYSNAIEFDPQNHKLYANRGKAWFKTGHFDEAISDFTQALKIDEHDANTYYDRGTA 401
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
Y++A KAI+ + N A+ + + ++ + KALE + + I+ F
Sbjct: 402 WLEKKNYEQAITDFNKAIEENPNLDIAFYNRGRAWKAKQDITKALEDYSKAIDINPIFES 461
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY+ RG L G G + KAI D S + I+PS + R + +GEY +A+
Sbjct: 462 AYNNRGNLYLGNGFYDKAIADFSKLIEINPSRSDAYSNRGLAWSGVGEYSKAI 514
>gi|300867655|ref|ZP_07112302.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
gi|300334366|emb|CBN57474.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
Length = 1196
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 124/261 (47%), Gaps = 14/261 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D++++ P EA RG A E AI+ + + I+
Sbjct: 669 NRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKVIEFK 728
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG+ EAI K +EF+P+ + + RG+ F A+
Sbjct: 729 PDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIAS 788
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
+++ + A+ G+ L +G +++A ++ KAI++ + EAW G L
Sbjct: 789 YEKAIEIKPDFYEAWFTRGIVLFKLGRFEEALASYDKAIEIKPDDHEAWNNRGWALGELR 848
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+F + L + +KA+E I + A++ RG L LG+ ++AI + L I P +
Sbjct: 849 RFKEALTSCDKAIE-------IKADYHYAWNNRGWALRNLGRFEEAIASYNKALEIKPDH 901
Query: 619 IECLYLRASCYHAIGEYREAV 639
E R +G + EA+
Sbjct: 902 YEAWNNRGVALQNLGRFEEAL 922
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 125/255 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G+ AI+ ++++++ P A RG A + E AI+ + + I+
Sbjct: 703 NRGVALFNLGRNEEAIASYEKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFK 762
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG + EAI KA+E +P+ + RGIV FK F A+
Sbjct: 763 PDKHEAWYNRGVALFNLGRNEEAIASYEKAIEIKPDFYEAWFTRGIVLFKLGRFEEALAS 822
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ ++ A+ G AL + +K+A + KAI++ ++ AW + ++L
Sbjct: 823 YDKAIEIKPDDHEAWNNRGWALGELRRFKEALTSCDKAIEIKADYHYAWNNRGWALRNLG 882
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + L I +A++ RG+ L LG+ ++A+ L + I P + R
Sbjct: 883 RFEEAIASYNKALEIKPDHYEAWNNRGVALQNLGRFEEALASLDKAIEIKPDDHYTWCNR 942
Query: 626 ASCYHAIGEYREAVI 640
+ + Y EA+I
Sbjct: 943 GATLIKLNCYEEALI 957
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 120/260 (46%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S D RG+A N G+ AI+ +D+ +K P Y +A RG A + E A++ +
Sbjct: 493 SADDWFYRGLALGNLGRNEEAIASYDKAIKIKPDYHQAWYKRGNALGDLGQFEEALASYD 552
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ I+ P EAW RG A LG +AI KA+E + + + RG F
Sbjct: 553 KTIEIKPDHQEAWFNRGWALRKLGRFEKAITSYDKAIEIKHDDHEAWFYRGYALDDLGRF 612
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ +++ ++ A+ Y G AL +G +++A ++ K I+ + AW +
Sbjct: 613 EEAIASYDKAIEIKHDDHEAWFYRGYALGELGRFEEAIASYDKVIEFKPDDYYAWNNRGW 672
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
Q+L E+A+ +V+ +A++ RG+ L LG++++AI + P +
Sbjct: 673 ALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKVIEFKPDDY 732
Query: 620 ECLYLRASCYHAIGEYREAV 639
R +G++ EA+
Sbjct: 733 YAWNNRGWALQNLGQFEEAI 752
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 121/255 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG A + G++ AI+ +D+ ++ EA RG A E AI+ + + I+
Sbjct: 600 FYRGYALDDLGRFEEAIASYDKAIEIKHDDHEAWFYRGYALGELGRFEEAIASYDKVIEF 659
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG A LG+ EAI K +EF+P+ + + RG+ F A+
Sbjct: 660 KPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIA 719
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++ ++ A+ G AL ++G++++A ++ K I+ + EAW + +L
Sbjct: 720 SYEKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNL 779
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+E+A+ ++ + I F +A+ RG++L LG+ ++A+ + I P + E
Sbjct: 780 GRNEEAIASYEKAIEIKPDFYEAWFTRGIVLFKLGRFEEALASYDKAIEIKPDDHEAWNN 839
Query: 625 RASCYHAIGEYREAV 639
R + ++EA+
Sbjct: 840 RGWALGELRRFKEAL 854
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 121/253 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D++++ P EA RG A E AI+ + +AI+
Sbjct: 737 NRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKAIEIK 796
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG LG EA+ KA+E +P+ + + RG + + F A+
Sbjct: 797 PDFYEAWFTRGIVLFKLGRFEEALASYDKAIEIKPDDHEAWNNRGWALGELRRFKEALTS 856
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G AL ++G +++A ++ KA+++ + EAW + Q+L
Sbjct: 857 CDKAIEIKADYHYAWNNRGWALRNLGRFEEAIASYNKALEIKPDHYEAWNNRGVALQNLG 916
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+AL L + + I + RG L L +++A+ L + IDP+ Y +
Sbjct: 917 RFEEALASLDKAIEIKPDDHYTWCNRGATLIKLNCYEEALISLDKAIEIDPNYTSAWYNQ 976
Query: 626 ASCYHAIGEYREA 638
H + Y E+
Sbjct: 977 ILVLHKLKRYEES 989
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A G++ AI+ +D+ ++ EA RG A E AI+ + +AI+
Sbjct: 566 FNRGWALRKLGRFEKAITSYDKAIEIKHDDHEAWFYRGYALDDLGRFEEAIASYDKAIEI 625
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
EAW RG A LG EAI K +EF+P+ + RG F A+
Sbjct: 626 KHDDHEAWFYRGYALGELGRFEEAIASYDKVIEFKPDDYYAWNNRGWALQNLGQFEEAIA 685
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++ + A+ G+AL ++G ++A ++ K I+ + AW + Q+L
Sbjct: 686 SYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKVIEFKPDDYYAWNNRGWALQNL 745
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+A+ +V+ +A++ RG+ L LG++++AI + I P E +
Sbjct: 746 GQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKAIEIKPDFYEAWFT 805
Query: 625 RASCYHAIGEYREAV 639
R +G + EA+
Sbjct: 806 RGIVLFKLGRFEEAL 820
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 116/253 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + G++ A++ +D+ ++ P + EA RG A E AI+ + +AI+
Sbjct: 534 RGNALGDLGQFEEALASYDKTIEIKPDHQEAWFNRGWALRKLGRFEKAITSYDKAIEIKH 593
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG A LG EAI KA+E + + + RG + F A+
Sbjct: 594 DDHEAWFYRGYALDDLGRFEEAIASYDKAIEIKHDDHEAWFYRGYALGELGRFEEAIASY 653
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ ++ A+ G AL ++G++++A ++ K I+ + EAW + +L
Sbjct: 654 DKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGR 713
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+E+A+ ++V+ A++ RG L LGQ ++AI + P E Y R
Sbjct: 714 NEEAIASYEKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRG 773
Query: 627 SCYHAIGEYREAV 639
+G EA+
Sbjct: 774 VALFNLGRNEEAI 786
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Query: 364 RNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
RN++ + K+ I DF +RGI G++ A++ +D+ ++ P EA
Sbjct: 781 RNEE-AIASYEKAIEIKPDFYEAWFTRGIVLFKLGRFEEALASYDKAIEIKPDDHEAWNN 839
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A R + A++ +AI+ AW RG A LG EAI +KALE +P
Sbjct: 840 RGWALGELRRFKEALTSCDKAIEIKADYHYAWNNRGWALRNLGRFEEAIASYNKALEIKP 899
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + + RG+ F A+ L +++ ++ + G L + Y++A +
Sbjct: 900 DHYEAWNNRGVALQNLGRFEEALASLDKAIEIKPDDHYTWCNRGATLIKLNCYEEALISL 959
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
KAI++D N+ AW + L E++ + +V+ ++ +
Sbjct: 960 DKAIEIDPNYTSAWYNQILVLHKLKRYEESAKSFYKVIELNPNY 1003
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 35/198 (17%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ N SA + W RG A LG + EAI KA++ +P+ ++RG
Sbjct: 488 IKINGSADD-WFYRGLALGNLGRNEEAIASYDKAIKIKPDYHQAWYKRGN---------- 536
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
AL +G++++A ++ K I++ + EAW +
Sbjct: 537 ------------------------ALGDLGQFEEALASYDKTIEIKPDHQEAWFNRGWAL 572
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ L EKA+ + + I +A+ RG L LG+ ++AI + I + E
Sbjct: 573 RKLGRFEKAITSYDKAIEIKHDDHEAWFYRGYALDDLGRFEEAIASYDKAIEIKHDDHEA 632
Query: 622 LYLRASCYHAIGEYREAV 639
+ R +G + EA+
Sbjct: 633 WFYRGYALGELGRFEEAI 650
>gi|15678100|ref|NP_275215.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621106|gb|AAB84576.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 403
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 127/257 (49%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ LS G + + +GKY A+ F + LK P PE L + E A+ + + +
Sbjct: 18 WHLSGGRSSLKQGKYKEALKEFRKALKASPNDPEILHYNAMTLLKLKRPEKALKCYEKIL 77
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
++NP EAW +G L EA++ +AL+ +P + +G + A
Sbjct: 78 KNNPKLAEAWNNKGVVLKELKRYDEALECYERALQIDPQDDGTWNNKGALLDTIGKPEKA 137
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E ++++++N A+ G L S+G+Y++A E + KA+Q++ F+EAW + ++
Sbjct: 138 IECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALIFE 197
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+L ++ALEC + L ID + ++ +G LL +G+ +KAI+ L I+ N +
Sbjct: 198 ELKRYDEALECYGRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAW 257
Query: 623 YLRASCYHAIGEYREAV 639
+ + Y EA+
Sbjct: 258 NNKGVVLEELKRYDEAL 274
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 114/222 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY A+ +++ L+ + + EA + + + A+ + A+Q +P W
Sbjct: 166 GKYEEALECYEKALQINAEFVEAWYNKALIFEELKRYDEALECYGRALQIDPQDDGTWNN 225
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G +G+ +AI+ KALE +A + +G+V + K ++ A+E ++++
Sbjct: 226 KGALLDTIGKPEKAIECYEKALEINQKNAKAWNNKGVVLEELKRYDEALECYEKALEINL 285
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G+ L +G+Y++A E KA++++ F +AW +DL E+AL+C
Sbjct: 286 ENDETWANKGVLLRKLGKYEEALECFEKALEINPEFADAWEWKGIILEDLKKPEEALKCY 345
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++ L ++ + ++++G L LG+H+KA K L IDP
Sbjct: 346 EKALKLNPQDKTLWYMQGKTLQKLGKHQKAKKSYKKALKIDP 387
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 117/244 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK AI +++ L+ + +A +G + E A+ + +A+Q N EAW
Sbjct: 132 GKPEKAIECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYN 191
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L EA++ +AL+ +P + +G + A+E +++++
Sbjct: 192 KALIFEELKRYDEALECYGRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEINQ 251
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N A+ G+ L + Y +A E + KA++++ E W + + L E+ALEC
Sbjct: 252 KNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECF 311
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ L I+ F+ A+ +G++L L + ++A+K L ++P + Y++ +G+
Sbjct: 312 EKALEINPEFADAWEWKGIILEDLKKPEEALKCYEKALKLNPQDKTLWYMQGKTLQKLGK 371
Query: 635 YREA 638
+++A
Sbjct: 372 HQKA 375
>gi|376005368|ref|ZP_09782882.1| Ser/thr protein kinase [Arthrospira sp. PCC 8005]
gi|423065278|ref|ZP_17054068.1| serine/threonine protein kinase with TPR repeat protein
[Arthrospira platensis C1]
gi|375326295|emb|CCE18635.1| Ser/thr protein kinase [Arthrospira sp. PCC 8005]
gi|406713188|gb|EKD08360.1| serine/threonine protein kinase with TPR repeat protein
[Arthrospira platensis C1]
Length = 754
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 136/275 (49%), Gaps = 13/275 (4%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ K + D +R +A + +AI+ +Q+++ +P +A RG A Q
Sbjct: 423 TQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQEN 482
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
EAAI D+TE I+ P+ EA++ RG A G + D ++A+ P SA + RG
Sbjct: 483 YEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESAAAYYNRG 542
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY-----TYLGLALSSIGEYKKAEEAHLKAIQ 545
F D+ A+ D + + + +N AY TY+ L G Y+ A E+ ++IQ
Sbjct: 543 RARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINL-----GNYEAAIESCSRSIQ 597
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKA 604
L+ ++ + + + ++ N + A+ + + ++ SKA+ RG L+H L + ++ A
Sbjct: 598 LNPTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRG-LVHSLAENYEAA 655
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I D S + ++P++ E RA + +G Y EA+
Sbjct: 656 IADYSQAISLNPNDAESYSNRAQAHAELGNYSEAI 690
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA +F + + DP+ EA + RG R + EAAI FT +IQ P
Sbjct: 338 GIAATGLVGLIVIFGLFQVLSRPDPVKSEAALKRGVERLEAGDPEAAIKAFTRSIQLFPD 397
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+++R A L + +AI D ++A++ +P + DI R + + +DF A+ DL+
Sbjct: 398 NSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLN 457
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ E+ A+ GLA S Y+ A + + I+ N EA+ + N
Sbjct: 458 QVIRLNPEDTDAFYQRGLAHYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNL 517
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+ + + + ++ + AY+ RG LG ++ A+ D + + +P N E R S
Sbjct: 518 QAGMADYTEAIRLNPESAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCS 577
Query: 628 CYHAIGEYREAV 639
Y +G Y A+
Sbjct: 578 TYINLGNYEAAI 589
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA +N Y +AI + ++ +P +A RG + EAAI+D+++AI N
Sbjct: 607 NRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAENYEAAIADYSQAISLN 666
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E++ R QA A LG EAI D ++A+ PN A + RG+V D A+ D
Sbjct: 667 PNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISD 726
Query: 506 LSACVKL 512
KL
Sbjct: 727 FEQAGKL 733
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G Y A++ ++Q++ +P EA R + EAAI + +IQ N
Sbjct: 540 NRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLN 599
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+A + + R A + AI D +KA+E EPN++ RG+V+ +++ AA+ D
Sbjct: 600 PTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAENYEAAIAD 658
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
S + L+ + +Y+ A + +G Y +A + +AI++ N A+
Sbjct: 659 YSQAISLNPNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAF 707
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERG 490
+AAI D T+AI+ P+ +A RG +L E+ E AI D S+A+ PN A+ R
Sbjct: 619 DAAIGDCTKAIELEPNNSKAHSNRGLVH-SLAENYEAAIADYSQAISLNPNDAESYSNRA 677
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ + +++ A+ D + +++ A+ G+ +S+G+ + A
Sbjct: 678 QAHAELGNYSEAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGA 723
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+ + A +A ++IQL + EA+ Y DL E+A+ Q + +D Y
Sbjct: 379 GDPEAAIKAFTRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFN 438
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
R L H + AI DL+ + ++P + + Y R +++ Y A++
Sbjct: 439 RSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQENYEAAIL 488
>gi|209523829|ref|ZP_03272382.1| serine/threonine protein kinase with TPR repeats [Arthrospira
maxima CS-328]
gi|209495861|gb|EDZ96163.1| serine/threonine protein kinase with TPR repeats [Arthrospira
maxima CS-328]
Length = 754
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 136/275 (49%), Gaps = 13/275 (4%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ K + D +R +A + +AI+ +Q+++ +P +A RG A Q
Sbjct: 423 TQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQEN 482
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
EAAI D+TE I+ P+ EA++ RG A G + D ++A+ P SA + RG
Sbjct: 483 YEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESAAAYYNRG 542
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY-----TYLGLALSSIGEYKKAEEAHLKAIQ 545
F D+ A+ D + + + +N AY TY+ L G Y+ A E+ ++IQ
Sbjct: 543 RARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINL-----GNYEAAIESCSRSIQ 597
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKA 604
L+ ++ + + + ++ N + A+ + + ++ SKA+ RG L+H L + ++ A
Sbjct: 598 LNPTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRG-LVHSLAEDYEAA 655
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I D S + ++P++ E RA + +G Y EA+
Sbjct: 656 IADYSQAISLNPNDAESYSNRAQAHAELGNYSEAI 690
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA +F + + DP+ EA + RG R + EAAI FT +IQ P
Sbjct: 338 GIAATGLVGLIVIFGLFQVLSRPDPVKSEAALKRGVERLEAGDPEAAIKAFTRSIQLFPD 397
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+++R A L + +AI D ++A++ +P + DI R + + +DF A+ DL+
Sbjct: 398 NSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLN 457
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ E+ A+ GLA S Y+ A + + I+ N EA+ + N
Sbjct: 458 QVIRLNPEDTDAFYQRGLAHYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNL 517
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+ + + + ++ + AY+ RG LG ++ A+ D + + +P N E R S
Sbjct: 518 QAGMADYTEAIRLNPESAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCS 577
Query: 628 CYHAIGEYREAV 639
Y +G Y A+
Sbjct: 578 TYINLGNYEAAI 589
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA +N Y +AI + ++ +P +A RG + + EAAI+D+++AI N
Sbjct: 607 NRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLN 666
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E++ R QA A LG EAI D ++A+ PN A + RG+V D A+ D
Sbjct: 667 PNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISD 726
Query: 506 LSACVKL 512
KL
Sbjct: 727 FEQAGKL 733
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G Y A++ ++Q++ +P EA R + EAAI + +IQ N
Sbjct: 540 NRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLN 599
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+A + + R A + AI D +KA+E EPN++ RG+V+ +D+ AA+ D
Sbjct: 600 PTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIAD 658
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
S + L+ + +Y+ A + +G Y +A + +AI++ N A+
Sbjct: 659 YSQAISLNPNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAF 707
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI D T+AI+ P+ +A RG + + AI D S+A+ PN A+ R
Sbjct: 619 DAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLNPNDAESYSNRAQ 678
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ + +++ A+ D + +++ A+ G+ +S+G+ + A
Sbjct: 679 AHAELGNYSEAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGA 723
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+ + A +A ++IQL + EA+ Y DL E+A+ Q + +D Y
Sbjct: 379 GDPEAAIKAFTRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFN 438
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
R L H + AI DL+ + ++P + + Y R +++ Y A++
Sbjct: 439 RSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQENYEAAIL 488
>gi|374578333|ref|ZP_09651429.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM471]
gi|374426654|gb|EHR06187.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM471]
Length = 461
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 5/290 (1%)
Query: 331 SSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIA 390
S+I D S+ S++ + L + D TS + + I+ + +RL +
Sbjct: 57 SAIVDQASNPSSDRAAALLVRADANARTSGGLTQALRDIDRAIALDGKNAKAWRLRGDLL 116
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
+ G A + + ++ DP E+ RG QR L+ A++D+ +AI+ P +
Sbjct: 117 REAGGDLNRAAADLSKAIELDPQNSESYELRGVVYTNQRRLDRALADYDQAIKLKPDNAQ 176
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
AW RG G++ +AI+DLS+AL +PN RG K AV D +
Sbjct: 177 AWSDRGVTYYLGGDNEKAIRDLSEALRLDPNGPRSYTNRGAAYKKLGQLAKAVFDDGEAI 236
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQDLANSE 568
+LD + Y GL+L+++GEY KA + +A++L NF G +L
Sbjct: 237 RLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFTNRGDSYHLKGELG--- 293
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
AL + L +D F++ Y+ R +L +G+ KKA+ D + L +DP N
Sbjct: 294 AALSDYEAALKLDPNFAQTYNNRAVLYKKMGERKKALADYETALRLDPGN 343
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
G +A++D+ +A+ + +A RG ++ D N A DLS ++LD +N +Y
Sbjct: 86 GGLTQALRDIDRAIALDGKNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQNSESYE 145
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G+ ++ +A + +AI+L + +AW Y ++EKA+ L + L +D
Sbjct: 146 LRGVVYTNQRRLDRALADYDQAIKLKPDNAQAWSDRGVTYYLGGDNEKAIRDLSEALRLD 205
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++Y RG LGQ KA+ D + +DP E R A+GEY +A+
Sbjct: 206 PNGPRSYTNRGAAYKKLGQLAKAVFDDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAI 263
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ A A+ + ++ DP PE RG + A E + AI+D+ +A++
Sbjct: 214 NRGAAYKKLGQLAKAVFDDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLA 273
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG + GE A+ D AL+ +PN A + R ++ K + A+ D
Sbjct: 274 PRP-NFFTNRGDSYHLKGELGAALSDYEAALKLDPNFAQTYNNRAVLYKKMGERKKALAD 332
Query: 506 LSACVKLDKENKSA 519
++LD N +A
Sbjct: 333 YETALRLDPGNDNA 346
>gi|300868026|ref|ZP_07112664.1| Serine/threonine protein kinase with TPR repeats [Oscillatoria sp.
PCC 6506]
gi|300333946|emb|CBN57842.1| Serine/threonine protein kinase with TPR repeats [Oscillatoria sp.
PCC 6506]
Length = 702
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 122/244 (50%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY AI+ F++ L+ P YPEA G+G A + E AI+ + +A++S P+ +AW +
Sbjct: 415 KYQEAIASFERALEIQPDYPEAWKGKGDALLNLQRYEEAIASYEKAVKSQPNFYDAWYSK 474
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L + A +A+E + +++ + G V + AVE V+
Sbjct: 475 GIAHQNLKQYQPAFDAYKQAVELKSDNSKAWYNLGNVQLELNKNQEAVEAYEKAVRFQPT 534
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+AL + +Y+ A +A+ +A+ L N+ +AW +L L E A++
Sbjct: 535 YYQAWYSRGIALMKLRQYEDAAKAYKQAVTLKGNYYQAWYNLGWSLHQLRRYEDAIDAYN 594
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+VL + R +A++ +G L+ L ++++AI + + + P E Y R + + Y
Sbjct: 595 KVLDLQSREYQAWYNKGNALYNLKRYEEAIASYNEAVYVKPDYYEAWYSRGNGLLELKRY 654
Query: 636 REAV 639
++A+
Sbjct: 655 QDAI 658
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 106/230 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A +N +Y AI+ +++ +K P + +A +G A ++ + A + +A++
Sbjct: 440 KGDALLNLQRYEEAIASYEKAVKSQPNFYDAWYSKGIAHQNLKQYQPAFDAYKQAVELKS 499
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW G + L ++ EA++ KA+ F+P + RGI K + + A +
Sbjct: 500 DNSKAWYNLGNVQLELNKNQEAVEAYEKAVRFQPTYYQAWYSRGIALMKLRQYEDAAKAY 559
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
V L A+ LG +L + Y+ A +A+ K + L +AW + +L
Sbjct: 560 KQAVTLKGNYYQAWYNLGWSLHQLRRYEDAIDAYNKVLDLQSREYQAWYNKGNALYNLKR 619
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
E+A+ + +Y+ + +A++ RG L L +++ AI + P
Sbjct: 620 YEEAIASYNEAVYVKPDYYEAWYSRGNGLLELKRYQDAIASYDKAVRYKP 669
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N +Y A++ ++Q +K Y E + A ++ + + +AIQ N
Sbjct: 337 TRGNTLYNLNRYEEALAAYNQAIKIKGDYAEVWKDKAKALYELKKYKESREACDKAIQLN 396
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG L + EAI +ALE +P+ + +G + + A+
Sbjct: 397 PEYLEAWTDRGYTLDKLEKYQEAIASFERALEIQPDYPEAWKGKGDALLNLQRYEEAIAS 456
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
VK A+ G+A ++ +Y+ A +A+ +A++L + +AW +L +L
Sbjct: 457 YEKAVKSQPNFYDAWYSKGIAHQNLKQYQPAFDAYKQAVELKSDNSKAWYNLGNVQLELN 516
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+++A+E ++ + + +A++ RG+ L L Q++ A K + + + + Y
Sbjct: 517 KNQEAVEAYEKAVRFQPTYYQAWYSRGIALMKLRQYEDAAKAYKQAVTLKGNYYQAWYNL 576
Query: 626 ASCYHAIGEYREAV 639
H + Y +A+
Sbjct: 577 GWSLHQLRRYEDAI 590
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 73/162 (45%)
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F +A LH RG + + A+ + +K+ + + AL + +YK++
Sbjct: 327 FNSANATELHTRGNTLYNLNRYEEALAAYNQAIKIKGDYAEVWKDKAKALYELKKYKESR 386
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
EA KAIQL+ +LEAW L ++A+ ++ L I + +A+ +G L
Sbjct: 387 EACDKAIQLNPEYLEAWTDRGYTLDKLEKYQEAIASFERALEIQPDYPEAWKGKGDALLN 446
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L ++++AI + P+ + Y + + + +Y+ A
Sbjct: 447 LQRYEEAIASYEKAVKSQPNFYDAWYSKGIAHQNLKQYQPAF 488
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI ++++L +A +G A + E AI+ + EA+ P EAW R
Sbjct: 585 RYEDAIDAYNKVLDLQSREYQAWYNKGNALYNLKRYEEAIASYNEAVYVKPDYYEAWYSR 644
Query: 456 GQARAALGESVEAIQDLSKALEFEPN 481
G L +AI KA+ ++P+
Sbjct: 645 GNGLLELKRYQDAIASYDKAVRYKPD 670
>gi|20090223|ref|NP_616298.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
gi|19915215|gb|AAM04778.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
Length = 400
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 114/227 (50%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y A+ ++++L+E P Y EA G+G A + AI + +AI+ +P EAW
Sbjct: 169 GSYEEAVEAYEKVLEESPDYKEAWAGKGIALGQMGRYDEAIIAYDKAIEIDPGFLEAWYY 228
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G +LG +A++ KA+E +P + D + GI + + A+ + ++
Sbjct: 229 KGVDLDSLGSHRQALKAYEKAVELDPENDDAWNNMGIDLENLEKYEEAINAFDKAIAINS 288
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G LS + +++A EA+ KA QLD +LEA+ L L N E+ALE
Sbjct: 289 ENSDVWYNKGFTLSQMHRFEEAVEAYRKATQLDPEYLEAYTSLGFVLAQLKNFEEALETY 348
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
++ L +D+ + ++ + + L LG+ ++A + IDP E
Sbjct: 349 EKALELDQGAADSWFGKAVCLSFLGREEEAEDAYRKAVEIDPRYAEI 395
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 121/253 (47%), Gaps = 2/253 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNP 446
G+ + GK+ AI FD+ +++DP L + A +F R E A+ + +A++ N
Sbjct: 60 GLDLLKLGKFNEAIIAFDKAIEKDPKNIYLLNNKAAALESFGR-FEEALKLYQKAVEINS 118
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W + + +GE A++ KALE P+ + + + + + + AVE
Sbjct: 119 EDADLWNNMAFSYSQVGEYERAVEAYGKALELRPDYPNAWYGKALNLSQAGSYEEAVEAY 178
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + K A+ G+AL +G Y +A A+ KAI++D FLEAW + L +
Sbjct: 179 EKVLEESPDYKEAWAGKGIALGQMGRYDEAIIAYDKAIEIDPGFLEAWYYKGVDLDSLGS 238
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+AL+ ++ + +D A++ G+ L L ++++AI + I+ N + Y +
Sbjct: 239 HRQALKAYEKAVELDPENDDAWNNMGIDLENLEKYEEAINAFDKAIAINSENSDVWYNKG 298
Query: 627 SCYHAIGEYREAV 639
+ + EAV
Sbjct: 299 FTLSQMHRFEEAV 311
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 113/244 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ + + L+ P YP A G+ + E A+ + + ++ +P EAW
Sbjct: 135 GEYERAVEAYGKALELRPDYPNAWYGKALNLSQAGSYEEAVEAYEKVLEESPDYKEAWAG 194
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A +G EAI KA+E +P + + +G+ A++ V+LD
Sbjct: 195 KGIALGQMGRYDEAIIAYDKAIEIDPGFLEAWYYKGVDLDSLGSHRQALKAYEKAVELDP 254
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN A+ +G+ L ++ +Y++A A KAI ++ + W + + E+A+E
Sbjct: 255 ENDDAWNNMGIDLENLEKYEEAINAFDKAIAINSENSDVWYNKGFTLSQMHRFEEAVEAY 314
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ +D + +AY G +L L ++A++ L +D + + +A C +G
Sbjct: 315 RKATQLDPEYLEAYTSLGFVLAQLKNFEEALETYEKALELDQGAADSWFGKAVCLSFLGR 374
Query: 635 YREA 638
EA
Sbjct: 375 EEEA 378
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+GIA G+Y AI +D+ ++ DP + EA +G A+ + +A++ +
Sbjct: 194 GKGIALGQMGRYDEAIIAYDKAIEIDPGFLEAWYYKGVDLDSLGSHRQALKAYEKAVELD 253
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW G L + EAI KA+ ++D+ + +G + F AVE
Sbjct: 254 PENDDAWNNMGIDLENLEKYEEAINAFDKAIAINSENSDVWYNKGFTLSQMHRFEEAVEA 313
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+LD E AYT LG L+ + +++A E + KA++LD+ ++W L
Sbjct: 314 YRKATQLDPEYLEAYTSLGFVLAQLKNFEEALETYEKALELDQGAADSWFGKAVCLSFLG 373
Query: 566 NSEKALECLQQVLYIDKRFSK 586
E+A + ++ + ID R+++
Sbjct: 374 REEEAEDAYRKAVEIDPRYAE 394
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 70/155 (45%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+E G+ K FN A+ ++ D +N AL S G +++A + + KA++
Sbjct: 56 LNECGLDLLKLGKFNEAIIAFDKAIEKDPKNIYLLNNKAAALESFGRFEEALKLYQKAVE 115
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + W ++ Y + E+A+E + L + + A++ + L L G +++A+
Sbjct: 116 INSEDADLWNNMAFSYSQVGEYERAVEAYGKALELRPDYPNAWYGKALNLSQAGSYEEAV 175
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ L P E + +G Y EA+I
Sbjct: 176 EAYEKVLEESPDYKEAWAGKGIALGQMGRYDEAII 210
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L + +AI D +A + E D+ N+ F SQ+ + + KA QLDP L+
Sbjct: 267 LENLEKYEEAINAFDKAIAINSENSDVWYNKGFTLSQMHRFEEAVEAYRKATQLDPEYLE 326
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSA 138
AY G + L EEAL +EK E L Q A
Sbjct: 327 AYTSLGFVLAQLKNFEEALETYEKALE--LDQGA 358
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
+L K ++ I D+ + D + + A L S + +A+++ + + E D
Sbjct: 65 KLGKFNEAIIAFDKAIEKDPKNIYLLNNKA--AALESFGRFEEALKLYQKAVEINSEDAD 122
Query: 72 ICNR-AFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
+ N AF YSQ+ ++ + KAL+L P A+ K S G EEA+ + Y
Sbjct: 123 LWNNMAFSYSQVGEYERAVEAYGKALELRPDYPNAWYGKALNLSQAGSYEEAV----EAY 178
Query: 131 EHALHQSADLKQ 142
E L +S D K+
Sbjct: 179 EKVLEESPDYKE 190
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L ++ +A+ + +L +S + ++ + Q+ + I DKA+++DP L+
Sbjct: 165 LSQAGSYEEAVEAYEKVLEESPDYKEAWAGKGIALGQMGRYDEAIIAYDKAIEIDPGFLE 224
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
A+ KG +LG +AL +EK E
Sbjct: 225 AWYYKGVDLDSLGSHRQALKAYEKAVE 251
>gi|428313062|ref|YP_007124039.1| hypothetical protein Mic7113_4972 [Microcoleus sp. PCC 7113]
gi|428254674|gb|AFZ20633.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 528
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 121/249 (48%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+N +Y AIS ++Q ++ P +PEA G A A + E AI+ + +AIQ P+ A
Sbjct: 175 LNSQRYEEAISAYNQAVQIQPNFPEAWNNGGLALANLQRYEEAIAAYDQAIQIQPNYHLA 234
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W RG A L EA+ +A++ +P+ ++ G + F + + ++ ++
Sbjct: 235 WSNRGDALVNLQRYEEALASYERAIQLKPDIPNVWFLHGAMLFDLQRYQESIASFKRAIQ 294
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ E A+ + G A+ ++ Y++A ++ +AI+ + LEAW + +L +E A
Sbjct: 295 IQPEFNEAWYFQGNAMLNLQHYEEAINSYNRAIKSKPDLLEAWYNRGVALMNLQRNEDAF 354
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+ + + FS A+ RGL+L L ++++++ + + P E R S
Sbjct: 355 VSFDRAIQLKSDFSDAWFNRGLVLFNLKRYEESVASFDRVIQLKPDIAEVWLFRGSALGE 414
Query: 632 IGEYREAVI 640
+ Y EA++
Sbjct: 415 LQRYAEALV 423
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 109/244 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A VN +Y A++ +++ ++ P P G + + +I+ F AIQ
Sbjct: 237 NRGDALVNLQRYEEALASYERAIQLKPDIPNVWFLHGAMLFDLQRYQESIASFKRAIQIQ 296
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW +G A L EAI ++A++ +P+ + + RG+ + A
Sbjct: 297 PEFNEAWYFQGNAMLNLQHYEEAINSYNRAIKSKPDLLEAWYNRGVALMNLQRNEDAFVS 356
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L + A+ GL L ++ Y+++ + + IQL + E W +L
Sbjct: 357 FDRAIQLKSDFSDAWFNRGLVLFNLKRYEESVASFDRVIQLKPDIAEVWLFRGSALGELQ 416
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+AL C + + + +A+ +RG++ L QH++AI + P N Y +
Sbjct: 417 RYAEALVCCDRAIQLKPELLEAWSVRGVVFAKLQQHEEAIAACDQVIQKKPDNPIGWYGK 476
Query: 626 ASCY 629
A CY
Sbjct: 477 ACCY 480
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A +N Y AI+ +++ +K P EA RG A + E A F AIQ
Sbjct: 306 QGNAMLNLQHYEEAINSYNRAIKSKPDLLEAWYNRGVALMNLQRNEDAFVSFDRAIQLKS 365
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG L E++ + ++ +P+ A++ RG + + + A+
Sbjct: 366 DFSDAWFNRGLVLFNLKRYEESVASFDRVIQLKPDIAEVWLFRGSALGELQRYAEALVCC 425
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L E A++ G+ + + ++++A A + IQ + W Y N
Sbjct: 426 DRAIQLKPELLEAWSVRGVVFAKLQQHEEAIAACDQVIQKKPDNPIGWYGKACCYALQGN 485
Query: 567 SEKALECLQQVLYIDKRF 584
E ++ LQ +D R+
Sbjct: 486 VELLIKNLQWTFELDSRY 503
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 12/165 (7%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R KSK ++ +RG+A +N + A FD+ ++ + +A RG +
Sbjct: 325 RAIKSKPDLLEAWYNRGVALMNLQRNEDAFVSFDRAIQLKSDFSDAWFNRGLVLFNLKRY 384
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E +++ F IQ P E W RG A L EA+ +A++ +P + RG+
Sbjct: 385 EESVASFDRVIQLKPDIAEVWLFRGSALGELQRYAEALVCCDRAIQLKPELLEAWSVRGV 444
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
V F E ++AC ++ ++ + IG Y KA
Sbjct: 445 V---FAKLQQHEEAIAACDQVIQKKPD---------NPIGWYGKA 477
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 10/130 (7%)
Query: 3 KRKLLDSRYR-------LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKA 55
K LL++ Y L + D +++ S + A R + L +L+ + ++
Sbjct: 330 KPDLLEAWYNRGVALMNLQRNEDAFVSFDRAIQLKSDFSDAWFNRGLV--LFNLKRYEES 387
Query: 56 IRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFS 114
+ D ++ +I ++ R +L+ + + CD+A+QL P LL+A+ ++G F+
Sbjct: 388 VASFDRVIQLKPDIAEVWLFRGSALGELQRYAEALVCCDRAIQLKPELLEAWSVRGVVFA 447
Query: 115 ALGRKEEALS 124
L + EEA++
Sbjct: 448 KLQQHEEAIA 457
>gi|427421749|ref|ZP_18911932.1| TPR repeat-containing protein [Leptolyngbya sp. PCC 7375]
gi|425757626|gb|EKU98480.1| TPR repeat-containing protein [Leptolyngbya sp. PCC 7375]
Length = 1303
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 128/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + N G+Y AI+ +D+ ++ +P A RG + A + AI+ + +A++ N
Sbjct: 775 NRGNSLTNLGRYEEAIASYDKAVEVNPDNHSAWYSRGNSLANLGRYQEAIASYDQAVEVN 834
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG + A+LG EAI KA+E +P+ + + RG + A+
Sbjct: 835 PDDHLAWYNRGISLASLGHYQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIAS 894
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+++ +N SA+ G +L+S+G Y++A ++ KA++L + AW + +L
Sbjct: 895 YDQAVEVNPDNHSAWYNRGNSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLG 954
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ + + + A++ RG LH LG++++AI + + + P E +
Sbjct: 955 RYQEAITSYNKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQ 1014
Query: 626 ASCYHAIGEYREAV 639
S +G Y EA+
Sbjct: 1015 GSSLANLGRYEEAI 1028
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 128/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + VN G+Y AI+ +D+ ++ +P A RG + E AI+ + +A++ N
Sbjct: 741 NRGNSLVNLGRYEEAIASYDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASYDKAVEVN 800
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG + A LG EAI +A+E P+ + RGI + A+
Sbjct: 801 PDNHSAWYSRGNSLANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASLGHYQEAIAS 860
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+L ++ +++ G +L+++G Y++A ++ +A++++ + AW + L
Sbjct: 861 YDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSLASLG 920
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ ++A+ + + + A++ RG LH LG++++AI + + + P N R
Sbjct: 921 HYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDNHLAWNNR 980
Query: 626 ASCYHAIGEYREAV 639
S H +G Y+EA+
Sbjct: 981 GSSLHNLGRYQEAI 994
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 128/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI+ + G Y AI+ +D+ ++ P + RG + A E AI+ + +A++ N
Sbjct: 843 NRGISLASLGHYQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVN 902
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG + A+LG EAI KA+E +P++ + RG + A+
Sbjct: 903 PDNHSAWYNRGNSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITS 962
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ V+L +N A+ G +L ++G Y++A ++ KA++L + EAW + +L
Sbjct: 963 YNKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLG 1022
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + + + A++ RG L LG++++AI + I P + + L R
Sbjct: 1023 RYEEAIASYDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIASYDKAVDIKPDDHKALANR 1082
Query: 626 ASCYHAIGEYREAV 639
+ +G++++A+
Sbjct: 1083 GDIHRRLGQHQQAL 1096
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 124/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + N G+Y AI+ +DQ ++ +P A RG + A + AI+ + +A++
Sbjct: 877 NRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSLASLGHYQEAIASYDKAVELK 936
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG + LG EAI +KA+E +P++ + RG + A+
Sbjct: 937 PDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDNHLAWNNRGSSLHNLGRYQEAITS 996
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ V+L + A+ G +L+++G Y++A ++ KA++L + AW + ++L
Sbjct: 997 YNKAVELKPDKHEAWNNQGSSLANLGRYEEAIASYDKAVELKPDDHLAWNNRGNSLKNLG 1056
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + + I KA RG + LGQH++A+ DL+ + + P + R
Sbjct: 1057 RYEEAIASYDKAVDIKPDDHKALANRGDIHRRLGQHQQALADLNHAIDLKPDYAWAIATR 1116
Query: 626 ASCYHAIGEYREAV 639
Y + +Y A+
Sbjct: 1117 GQTYAQLQQYETAL 1130
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 134/287 (46%), Gaps = 3/287 (1%)
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDP 412
K T+ E R K + +K+ I D L ++G+ G+ AI+ +D + +P
Sbjct: 674 KGTALEKLRKYKEALISHNKALEIKPDDALGWYNKGVQLGQLGRDEEAIASYDNAVNINP 733
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
+ RG + E AI+ + +A++ NP+ AW RG + LG EAI
Sbjct: 734 NDHNSWNNRGNSLVNLGRYEEAIASYDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASY 793
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
KA+E P++ + RG + A+ V+++ ++ A+ G++L+S+G
Sbjct: 794 DKAVEVNPDNHSAWYSRGNSLANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASLGH 853
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y++A ++ KA++L + +W + +L E+A+ Q + ++ A++ RG
Sbjct: 854 YQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRG 913
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L LG +++AI + + P N R S H +G Y+EA+
Sbjct: 914 NSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQEAI 960
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 135/299 (45%), Gaps = 35/299 (11%)
Query: 376 SKSISVDFRLSR-GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA----RAFQRE 430
S VD L + G++ N G Y AI+ +D+ L +P A IG+GTA R ++
Sbjct: 628 SPDFVVDLYLWKLGLSLHNLGHYVEAIASYDKALNINPDDHNAWIGKGTALEKLRKYKEA 687
Query: 431 L------------------------------EAAISDFTEAIQSNPSAGEAWKRRGQARA 460
L E AI+ + A+ NP+ +W RG +
Sbjct: 688 LISHNKALEIKPDDALGWYNKGVQLGQLGRDEEAIASYDNAVNINPNDHNSWNNRGNSLV 747
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
LG EAI KA+E PN + + RG + A+ V+++ +N SA+
Sbjct: 748 NLGRYEEAIASYDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASYDKAVEVNPDNHSAW 807
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G +L+++G Y++A ++ +A++++ + AW + L + ++A+ + + +
Sbjct: 808 YSRGNSLANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASLGHYQEAIASYDKAVEL 867
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+++ RG L LG++++AI + ++P N Y R + ++G Y+EA+
Sbjct: 868 KPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSLASLGHYQEAI 926
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 120/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + G Y AI+ +D+ ++ P A RG++ + AI+ + +A++
Sbjct: 911 NRGNSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELK 970
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG + LG EAI +KA+E +P+ + + +G + A+
Sbjct: 971 PDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRYEEAIAS 1030
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+L ++ A+ G +L ++G Y++A ++ KA+ + + +A + ++ L
Sbjct: 1031 YDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIASYDKAVDIKPDDHKALANRGDIHRRLG 1090
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL L + + ++ A RG L Q++ A++DL + IDP + + R
Sbjct: 1091 QHQQALADLNHAIDLKPDYAWAIATRGQTYAQLQQYETALEDLDRTIEIDPDDTWAIGYR 1150
Query: 626 ASCYHAIGEYREAV 639
Y + Y+ A+
Sbjct: 1151 GELYLWLHRYQAAL 1164
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + N G+Y AI+ +++ ++ P A RG++ + AI+ + +A++
Sbjct: 945 NRGSSLHNLGRYQEAITSYNKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELK 1004
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW +G + A LG EAI KA+E +P+ + RG + A+
Sbjct: 1005 PDKHEAWNNQGSSLANLGRYEEAIASYDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIAS 1064
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V + ++ A G +G++++A AI L ++ A Q Y L
Sbjct: 1065 YDKAVDIKPDDHKALANRGDIHRRLGQHQQALADLNHAIDLKPDYAWAIATRGQTYAQLQ 1124
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E ALE L + + ID + A RG L L +++ A+ + L + LY R
Sbjct: 1125 QYETALEDLDRTIEIDPDDTWAIGYRGELYLWLHRYQAALTAFNHALEKKSDSDWTLYCR 1184
Query: 626 A 626
A
Sbjct: 1185 A 1185
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + N G+Y AI+ +D+ + P +AL RG + + A++D AI
Sbjct: 1047 NRGNSLKNLGRYEEAIASYDKAVDIKPDDHKALANRGDIHRRLGQHQQALADLNHAIDLK 1106
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A RGQ A L + A++DL + +E +P+ + RG + + AA+
Sbjct: 1107 PDYAWAIATRGQTYAQLQQYETALEDLDRTIEIDPDDTWAIGYRGELYLWLHRYQAALTA 1166
Query: 506 LSACVKLDKENKSAYTYL--GLALSSIGEYKKAEE 538
+ L+K++ S +T LAL+ I + A E
Sbjct: 1167 FNHA--LEKKSDSDWTLYCRALALALITNQELATE 1199
>gi|422301645|ref|ZP_16389012.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
gi|389789312|emb|CCI14645.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
Length = 642
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 119/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G++ AI+ +DQ L+ P Y EA RG A L AI+ + +A++
Sbjct: 189 NRGIALDNLGRFEEAIASYDQALEFKPDYHEAWNNRGIALDNLGRLAEAIASYDKALEIK 248
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG E I +ALE +P+ + + RG F A+
Sbjct: 249 PDKHEAWYNRGNALGNLGRFAEEIASYGRALEIKPDKHEAWYNRGNALGNLGRFEQAIAS 308
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ ++ A+ G+AL ++G ++A ++ +A+++ +F AW + +L
Sbjct: 309 YDKALEIKPDDHLAWYNRGVALGNLGRLEEAIASYDQALEIKPDFHLAWTNRGVALGNLG 368
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ Q L I F A+ RG L LG+ +AI L I P + R
Sbjct: 369 RLEEAIASYDQALKIQPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTNR 428
Query: 626 ASCYHAIGEYREAV 639
+ +G + E +
Sbjct: 429 GAALVNLGRWAEEI 442
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ I DF L+ RG+A N G+ AI+ +DQ LK P + A RG A
Sbjct: 339 AIASYDQALEIKPDFHLAWTNRGVALGNLGRLEEAIASYDQALKIQPDFHLAWTNRGAAL 398
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
AI+ A+ P +AW RG A LG E I +ALEF+P+ +
Sbjct: 399 VNLGRWAEAIASCDRALAIKPDLHQAWTNRGAALVNLGRWAEEIASYDRALEFKPDYHEA 458
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ + + +++ ++ A+ G+AL+++G +++A ++ + ++
Sbjct: 459 WYNRGVALANLGRWAEEIASYDKALEIKPDDHLAWYNRGIALANLGRFEQAIASYDRVLE 518
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +F AW +L E+AL Q L I F A+ RG L LG+ +AI
Sbjct: 519 IKPDFHPAWSDRGIVLDNLGRFEEALASCDQALAIKPDFHLAWTNRGAALVNLGRWAEAI 578
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P + R + +G + EA+
Sbjct: 579 ASCDRALAIKPDLHQAWTNRGAALVNLGRWAEAI 612
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 115/257 (44%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F +G + G + AI+ +DQ L+ P EA RG A E AI+ + +A+
Sbjct: 152 FWFEQGYQKYTNGDFIGAIASYDQALEIKPDVHEAWNNRGIALDNLGRFEEAIASYDQAL 211
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P EAW RG A LG EAI KALE +P+ + + RG F
Sbjct: 212 EFKPDYHEAWNNRGIALDNLGRLAEAIASYDKALEIKPDKHEAWYNRGNALGNLGRFAEE 271
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ +++ + A+ G AL ++G +++A ++ KA+++ + AW +
Sbjct: 272 IASYGRALEIKPDKHEAWYNRGNALGNLGRFEQAIASYDKALEIKPDDHLAWYNRGVALG 331
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+L E+A+ Q L I F A+ RG+ L LG+ ++AI L I P
Sbjct: 332 NLGRLEEAIASYDQALEIKPDFHLAWTNRGVALGNLGRLEEAIASYDQALKIQPDFHLAW 391
Query: 623 YLRASCYHAIGEYREAV 639
R + +G + EA+
Sbjct: 392 TNRGAALVNLGRWAEAI 408
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G+ AI+ +DQ L+ P + A RG A LE AI+ + +A++
Sbjct: 325 NRGVALGNLGRLEEAIASYDQALEIKPDFHLAWTNRGVALGNLGRLEEAIASYDQALKIQ 384
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG EAI +AL +P+ RG + +
Sbjct: 385 PDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTNRGAALVNLGRWAEEIAS 444
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G+AL+++G + + ++ KA+++ + AW + +L
Sbjct: 445 YDRALEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALEIKPDDHLAWYNRGIALANLG 504
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ +VL I F A+ RG++L LG+ ++A+ L I P R
Sbjct: 505 RFEQAIASYDRVLEIKPDFHPAWSDRGIVLDNLGRFEEALASCDQALAIKPDFHLAWTNR 564
Query: 626 ASCYHAIGEYREAV 639
+ +G + EA+
Sbjct: 565 GAALVNLGRWAEAI 578
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 112/254 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ A AI+ +D+ L+ P EA RG A I+ + A++
Sbjct: 223 NRGIALDNLGRLAEAIASYDKALEIKPDKHEAWYNRGNALGNLGRFAEEIASYGRALEIK 282
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG +AI KALE +P+ + RG+ A+
Sbjct: 283 PDKHEAWYNRGNALGNLGRFEQAIASYDKALEIKPDDHLAWYNRGVALGNLGRLEEAIAS 342
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+T G+AL ++G ++A ++ +A+++ +F AW + +L
Sbjct: 343 YDQALEIKPDFHLAWTNRGVALGNLGRLEEAIASYDQALKIQPDFHLAWTNRGAALVNLG 402
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+A+ + L I +A+ RG L LG+ + I L P E Y R
Sbjct: 403 RWAEAIASCDRALAIKPDLHQAWTNRGAALVNLGRWAEEIASYDRALEFKPDYHEAWYNR 462
Query: 626 ASCYHAIGEYREAV 639
+G + E +
Sbjct: 463 GVALANLGRWAEEI 476
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 116/268 (43%), Gaps = 3/268 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ I DF L+ RG A VN G++A AI+ D+ L P +A RG A
Sbjct: 373 AIASYDQALKIQPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTNRGAAL 432
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
I+ + A++ P EAW RG A A LG E I KALE +P+
Sbjct: 433 VNLGRWAEEIASYDRALEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALEIKPDDHLA 492
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI F A+ +++ + A++ G+ L ++G +++A + +A+
Sbjct: 493 WYNRGIALANLGRFEQAIASYDRVLEIKPDFHPAWSDRGIVLDNLGRFEEALASCDQALA 552
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +F AW + +L +A+ + L I +A+ RG L LG+ +AI
Sbjct: 553 IKPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTNRGAALVNLGRWAEAI 612
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIG 633
L I P E R + +G
Sbjct: 613 ASCDRALEIKPDYHEAWTNRENALRNLG 640
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 14/261 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++A I+ + + L+ P EA RG A E AI+ + +A++
Sbjct: 257 NRGNALGNLGRFAEEIASYGRALEIKPDKHEAWYNRGNALGNLGRFEQAIASYDKALEIK 316
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG EAI +ALE +P+ RG+ A+
Sbjct: 317 PDDHLAWYNRGVALGNLGRLEEAIASYDQALEIKPDFHLAWTNRGVALGNLGRLEEAIAS 376
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-------HLT 558
+K+ + A+T G AL ++G + +A + +A+ + + +AW +L
Sbjct: 377 YDQALKIQPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTNRGAALVNLG 436
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++ +++A+ ++ALE + +A++ RG+ L LG+ + I L I P +
Sbjct: 437 RWAEEIASYDRALE-------FKPDYHEAWYNRGVALANLGRWAEEIASYDKALEIKPDD 489
Query: 619 IECLYLRASCYHAIGEYREAV 639
Y R +G + +A+
Sbjct: 490 HLAWYNRGIALANLGRFEQAI 510
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A VN G++A I+ +D+ L+ P Y EA RG A A I+ + +A++
Sbjct: 427 NRGAALVNLGRWAEEIASYDRALEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALEIK 486
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A A LG +AI + LE +P+ +RGIV F A+
Sbjct: 487 PDDHLAWYNRGIALANLGRFEQAIASYDRVLEIKPDFHPAWSDRGIVLDNLGRFEEALAS 546
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + + A+T G AL ++G + +A + +A+ + + +AW + +L
Sbjct: 547 CDQALAIKPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTNRGAALVNLG 606
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+A+ + L I + +A+ R L LG+
Sbjct: 607 RWAEAIASCDRALEIKPDYHEAWTNRENALRNLGR 641
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEI-QD 71
L + + I D+ +++ A T R A L +L W++AI D LA ++ Q
Sbjct: 367 LGRLEEAIASYDQALKIQPDFHLAWTNRG--AALVNLGRWAEAIASCDRALAIKPDLHQA 424
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR L I D+AL+ P +A+ +G A + LGR E ++ ++K E
Sbjct: 425 WTNRGAALVNLGRWAEEIASYDRALEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALE 484
>gi|429123131|ref|ZP_19183664.1| hypothetical protein A966_02421 [Brachyspira hampsonii 30446]
gi|426280944|gb|EKV57947.1| hypothetical protein A966_02421 [Brachyspira hampsonii 30446]
Length = 392
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 123/248 (49%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
NE Y SAI + LK + + A RG E A+ DF +AI+ N + EA+
Sbjct: 55 NENSYKSAIEDYTWALKLNDKFAAAYYNRGIMNRSLGNTEDALKDFDKAIELNYNLEEAY 114
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
R +A+L + +I+D +KA+E P+ AD + R + ++ A++D ++
Sbjct: 115 YVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEY 174
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ AY G +G Y +A + + AI ++R F + + + + + + A+E
Sbjct: 175 NSHFTDAYNNRGNVKEKLGNYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVE 234
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+++ ID +SKAY RG++ + +++AIKD + +DP+ + Y +A + +
Sbjct: 235 DFDELIKIDPNYSKAYLNRGIIAITMEAYQEAIKDFDKVIELDPNIADAYYNKAVALNHL 294
Query: 633 GEYREAVI 640
G Y E+++
Sbjct: 295 GIYDESIL 302
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I +++ ++ P + +A R ++ E + AI D+ +AI+ N +A+ RG
Sbjct: 127 YKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFTDAYNNRG 186
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ LG EAI D + A+ AD R F KD+ AVED +K+D
Sbjct: 187 NVKEKLGNYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKIDPNY 246
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY G+ ++ Y++A + K I+LD N +A+ + L ++++ Q
Sbjct: 247 SKAYLNRGIIAITMEAYQEAIKDFDKVIELDPNIADAYYNKAVALNHLGIYDESILYYDQ 306
Query: 577 VLYIDKRFSKAYHLRGL 593
+ ++ +S++Y RG+
Sbjct: 307 AIKLNPDYSESYFNRGI 323
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI---GEYKKAEEAHLKAIQLDRNF 550
FK K++N A+E S +KLD AY A ++I YK A E + A++L+ F
Sbjct: 17 FKNKNYNLAIEYFSEVIKLDSTIYEAYYNRANAKANIDNENSYKSAIEDYTWALKLNDKF 76
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + + L N+E AL+ + + ++ +AY++R L +K +I+D +
Sbjct: 77 AAAYYNRGIMNRSLGNTEDALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNK 136
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + P + Y RA +A+GEY+EA+
Sbjct: 137 AIEVYPHFADAYYNRALSKNALGEYKEAI 165
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G Y AI + + + + + R A+ ++ + A+ DF E I+ +
Sbjct: 184 NRGNVKEKLGNYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKID 243
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
P+ +A+ RG + EAI+D K +E +PN AD + + +
Sbjct: 244 PNYSKAYLNRGIIAITMEAYQEAIKDFDKVIELDPNIADAYYNKAV 289
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L+++ KAI L+ L ++Y + RA + L+ +K I D +KA+++ P AY
Sbjct: 96 ALKDFDKAIE-LNYNLEEAYYV-----RANTKASLKDYKGSIEDYNKAIEVYPHFADAYY 149
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALH 135
+ + +ALG +EA+ ++K E+ H
Sbjct: 150 NRALSKNALGEYKEAIKDYDKAIEYNSH 177
>gi|338814927|ref|ZP_08626892.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
gi|337273094|gb|EGO61766.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
Length = 525
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 7/262 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG GKY AI+ F + ++ D P+A RG A ++ + A++DF + I
Sbjct: 71 LQRGNIYYTRGKYVEAIADFTRSIQLDAANPKAFYSRGLAFRARKMYDQALTDFNKVIAL 130
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N EA+ + G +A+ +A++D +K LE P L ERG V F + ++ A+
Sbjct: 131 NRKYWEAYYQSGLVQASKENYEQAVRDYTKTLELNPRHVPSLFERGNVFFALEQWDQALR 190
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD + Y GL + G+ + A + KA+++D +++ A+ + YQ
Sbjct: 191 DYNRAIELDPRSVQVYNSRGLVYAETGKPEAALADYNKALEIDPDYVHAYNNRGDLYQLQ 250
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+A+ + L ++ + AY RG + G + +AI D S L ID I
Sbjct: 251 KRYGEAIADFNKALELNPSSAAAYDRRGRCYYAQGNYDQAIADYSKALDIDSRYIHAYNN 310
Query: 625 RASCY-------HAIGEYREAV 639
R + Y AI +Y A+
Sbjct: 311 RGNAYSNRGLRDQAIADYSLAI 332
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 115/248 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q ++ Y A+ + + L+ +P + +L RG + + A+ D+ AI+ +P
Sbjct: 142 GLVQASKENYEQAVRDYTKTLELNPRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPR 201
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + + RG A G+ A+ D +KALE +P+ + RG + K + A+ D +
Sbjct: 202 SVQVYNSRGLVYAETGKPEAALADYNKALEIDPDYVHAYNNRGDLYQLQKRYGEAIADFN 261
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ + +AY G + G Y +A + KA+ +D ++ A+ + Y +
Sbjct: 262 KALELNPSSAAAYDRRGRCYYAQGNYDQAIADYSKALDIDSRYIHAYNNRGNAYSNRGLR 321
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
++A+ + I+ R + AY RGL+ G H +AI D S L + P R
Sbjct: 322 DQAIADYSLAIEINPRNAIAYRNRGLVYWTKGMHDQAIADFSQALELRPGFKLAYINRGD 381
Query: 628 CYHAIGEY 635
Y G Y
Sbjct: 382 VYRDKGRY 389
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A Y A++ F++++ + Y EA G +A + E A+ D+T+ ++ N
Sbjct: 106 SRGLAFRARKMYDQALTDFNKVIALNRKYWEAYYQSGLVQASKENYEQAVRDYTKTLELN 165
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG AL + +A++D ++A+E +P S + + RG+V + AA+ D
Sbjct: 166 PRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPRSVQVYNSRGLVYAETGKPEAALAD 225
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +++D + AY G Y +A KA++L+ + A+ + Y
Sbjct: 226 YNKALEIDPDYVHAYNNRGDLYQLQKRYGEAIADFNKALELNPSSAAAYDRRGRCYYAQG 285
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N ++A+ + L ID R+ AY+ RG G +AI D S + I+P N R
Sbjct: 286 NYDQAIADYSKALDIDSRYIHAYNNRGNAYSNRGLRDQAIADYSLAIEINPRNAIAYRNR 345
Query: 626 ASCYHAIGEYREAV 639
Y G + +A+
Sbjct: 346 GLVYWTKGMHDQAI 359
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 103/219 (47%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + E A+SDF+ AI + S A+ +RG G+ VEAI D +++++ +
Sbjct: 39 RGNFYYIMGQHEQAMSDFSRAIGLDSSHAGAYLQRGNIYYTRGKYVEAIADFTRSIQLDA 98
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + RG+ K ++ A+ D + + L+++ AY GL +S Y++A +
Sbjct: 99 ANPKAFYSRGLAFRARKMYDQALTDFNKVIALNRKYWEAYYQSGLVQASKENYEQAVRDY 158
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
K ++L+ + + + L ++AL + + +D R + Y+ RGL+ G+
Sbjct: 159 TKTLELNPRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPRSVQVYNSRGLVYAETGK 218
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ A+ D + L IDP + R Y Y EA+
Sbjct: 219 PEAALADYNKALEIDPDYVHAYNNRGDLYQLQKRYGEAI 257
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 34/274 (12%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ +++ ++ DP + RG A + EAA++D+ +A++ +P A+ RG
Sbjct: 188 ALRDYNRAIELDPRSVQVYNSRGLVYAETGKPEAALADYNKALEIDPDYVHAYNNRGDLY 247
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
EAI D +KALE P+SA RG + +++ A+ D S + +D A
Sbjct: 248 QLQKRYGEAIADFNKALELNPSSAAAYDRRGRCYYAQGNYDQAIADYSKALDIDSRYIHA 307
Query: 520 YTYLGLALS-------SIGEYKKAEEAHLK---------------------------AIQ 545
Y G A S +I +Y A E + + A++
Sbjct: 308 YNNRGNAYSNRGLRDQAIADYSLAIEINPRNAIAYRNRGLVYWTKGMHDQAIADFSQALE 367
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L F A+ + Y+D + +LE +VL ++ + AY RG +G++ +AI
Sbjct: 368 LRPGFKLAYINRGDVYRDKGRYDLSLEDFNKVLTLNSDYVFAYQSRGQTYFAMGEYDRAI 427
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + L + P E RA Y +G+ EAV
Sbjct: 428 IDYNKALALKPQVAEVHKNRADAYRKLGKATEAV 461
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 1/245 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ F++ L+ +P A RG Q + AI+D+++A+ + A+ R
Sbjct: 252 RYGEAIADFNKALELNPSSAAAYDRRGRCYYAQGNYDQAIADYSKALDIDSRYIHAYNNR 311
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + G +AI D S A+E P +A RG+V + + A+ D S ++L
Sbjct: 312 GNAYSNRGLRDQAIADYSLAIEINPRNAIAYRNRGLVYWTKGMHDQAIADFSQALELRPG 371
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
K AY G G Y + E K + L+ +++ A+ Q Y + ++A+
Sbjct: 372 FKLAYINRGDVYRDKGRYDLSLEDFNKVLTLNSDYVFAYQSRGQTYFAMGEYDRAIIDYN 431
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGE 634
+ L + + ++ + R LG+ +A+ D + L ++P +Y +A+ Y G
Sbjct: 432 KALALKPQVAEVHKNRADAYRKLGKATEAVADYDAALKLNPGLDPYIYFYKAALYQQAGF 491
Query: 635 YREAV 639
+AV
Sbjct: 492 TADAV 496
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%)
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A S P + RG +G+ +A+ D S+A+ + + A +RG + + +
Sbjct: 25 ATVSEPQDANDFYERGNFYYIMGQHEQAMSDFSRAIGLDSSHAGAYLQRGNIYYTRGKYV 84
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ D + ++LD N A+ GLA + Y +A K I L+R + EA+
Sbjct: 85 EAIADFTRSIQLDAANPKAFYSRGLAFRARKMYDQALTDFNKVIALNRKYWEAYYQSGLV 144
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
N E+A+ + L ++ R + RG + L Q +A++D + + +DP +++
Sbjct: 145 QASKENYEQAVRDYTKTLELNPRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPRSVQ 204
Query: 621 CLYLRASCYHAIGE 634
R Y G+
Sbjct: 205 VYNSRGLVYAETGK 218
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 179/454 (39%), Gaps = 54/454 (11%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++S+AI LDS A +Y R Y + I D +++QLD +A+
Sbjct: 52 AMSDFSRAIG-LDSSHAGAY-----LQRGNIYYTRGKYVEAIADFTRSIQLDAANPKAFY 105
Query: 108 LKGCAFSALGRKEEALS-----------VWEKGYEHALHQSADLKQFLELEELLTAAKQD 156
+G AF A ++AL+ WE Y+ L Q++ +E A +D
Sbjct: 106 SRGLAFRARKMYDQALTDFNKVIALNRKYWEAYYQSGLVQAS--------KENYEQAVRD 157
Query: 157 RSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSS-QSRDVSETCSKSS 215
+ T E + + SL + A ++ + ++N++ D S Q + +
Sbjct: 158 YTKTLELN-PRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPRSVQVYNSRGLVYAET 216
Query: 216 HDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGS-SDGSKSTHASRDASEIN 274
P+ +D K P + G L ++ + + + +D +K A E+N
Sbjct: 217 GKPEAA--LADYNKALEIDPDYVHAYNNRGDLYQLQKRYGEAIADFNK-------ALELN 267
Query: 275 RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSIS 334
S+ +D + G D L DS ++ N +YS +
Sbjct: 268 PSSAAAYD------RRGRCYYAQGNYDQAIADYSKALDIDSRYIHAYNNRGNAYSNRGLR 321
Query: 335 DNKSSDST-----ESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS--- 386
D +D + R+ ++++ L + K + S++ + F+L+
Sbjct: 322 DQAIADYSLAIEINPRNAIAYRNRGLVYWT---KGMHDQAIADFSQALELRPGFKLAYIN 378
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG ++G+Y ++ F+++L + Y A RG E + AI D+ +A+ P
Sbjct: 379 RGDVYRDKGRYDLSLEDFNKVLTLNSDYVFAYQSRGQTYFAMGEYDRAIIDYNKALALKP 438
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
E K R A LG++ EA+ D AL+ P
Sbjct: 439 QVAEVHKNRADAYRKLGKATEAVADYDAALKLNP 472
>gi|223939851|ref|ZP_03631720.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223891443|gb|EEF57935.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 442
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 119/246 (48%), Gaps = 4/246 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A +G A+ +++ L+ +P Y EA R A QR+ AISD+T A+Q P
Sbjct: 111 RGRAYAAKGNLEQAMQDYNRALELNPKYAEAFFDRANAYFLQRKFNEAISDYTNAVQFEP 170
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ RG+AR+A + +AI D S+A+ A L RG +K F+ A+ D
Sbjct: 171 GNARSFYERGEARSAKADWEQAINDYSEAVRLNSREALYLGARGFACYKTGRFDQALSDY 230
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++D + +Y L SS+G+ KA AI+L+ + +G L
Sbjct: 231 DEAIRIDANHYKSYHGRALIFSSLGQLDKALMNFDVAIRLNATQAQLYGGRGAICLKLGM 290
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC----L 622
++ALE Q++ +D + + Y R + G+ KKA+ D + +DP +++
Sbjct: 291 LDQALEDYHQLIKLDPKNAMGYMARAAVHARKGEFKKALDDSLESVWLDPISVKTHNSLA 350
Query: 623 YLRASC 628
+L A+C
Sbjct: 351 WLLATC 356
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 123/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +G++ A+ + ++++ +P +A RG A A + LE A+ D+ A++ N
Sbjct: 76 TRGLIYDKKGEFDKALDDWKEVVRLEPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELN 135
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ R A + EAI D + A++FEP +A +ERG D+ A+ D
Sbjct: 136 PKYAEAFFDRANAYFLQRKFNEAISDYTNAVQFEPGNARSFYERGEARSAKADWEQAIND 195
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S V+L+ G A G + +A + +AI++D N +++ + L
Sbjct: 196 YSEAVRLNSREALYLGARGFACYKTGRFDQALSDYDEAIRIDANHYKSYHGRALIFSSLG 255
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+KAL + ++ ++ Y RG + LG +A++D + +DP N R
Sbjct: 256 QLDKALMNFDVAIRLNATQAQLYGGRGAICLKLGMLDQALEDYHQLIKLDPKNAMGYMAR 315
Query: 626 ASCYHAIGEYREAV 639
A+ + GE+++A+
Sbjct: 316 AAVHARKGEFKKAL 329
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 38/262 (14%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL---------------------- 431
+G Y +IS ++ L+ +P Y EA RG A A + EL
Sbjct: 18 DGNYDLSISRWNAALQLNPHYAEAYTYRGMAYAAKLELNQALEDLDTAISLGDSRAYSTR 77
Query: 432 ----------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
+ A+ D+ E ++ P +A++ RG+A AA G +A+QD ++ALE P
Sbjct: 78 GLIYDKKGEFDKALDDWKEVVRLEPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELNPK 137
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A+ +R F + FN A+ D + V+ + N ++ G A S+ ++++A +
Sbjct: 138 YAEAFFDRANAYFLQRKFNEAISDYTNAVQFEPGNARSFYERGEARSAKADWEQAINDYS 197
Query: 542 KAIQLDRN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+A++L+ +L A G ++AL + + ID K+YH R L+ L
Sbjct: 198 EAVRLNSREALYLGARGFAC---YKTGRFDQALSDYDEAIRIDANHYKSYHGRALIFSSL 254
Query: 599 GQHKKAIKDLSSGLGIDPSNIE 620
GQ KA+ + + ++ + +
Sbjct: 255 GQLDKALMNFDVAIRLNATQAQ 276
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+IS + A+Q NP EA+ RG A AA E +A++DL A+ + A RG++
Sbjct: 24 SISRWNAALQLNPHYAEAYTYRGMAYAAKLELNQALEDLDTAISLGDSRA--YSTRGLIY 81
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
K +F+ A++D V+L+ + AY + G A ++ G ++A + + +A++L+ + EA
Sbjct: 82 DKKGEFDKALDDWKEVVRLEPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELNPKYAEA 141
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ Y +A+ + + +++++ RG ++AI D S +
Sbjct: 142 FFDRANAYFLQRKFNEAISDYTNAVQFEPGNARSFYERGEARSAKADWEQAINDYSEAVR 201
Query: 614 IDPSNIECLYLRA---SCY------HAIGEYREAV 639
++ E LYL A +CY A+ +Y EA+
Sbjct: 202 LNSR--EALYLGARGFACYKTGRFDQALSDYDEAI 234
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G++ A+S +D+ ++ D + ++ GR + +L+ A+ +F AI+ N
Sbjct: 212 ARGFACYKTGRFDQALSDYDEAIRIDANHYKSYHGRALIFSSLGQLDKALMNFDVAIRLN 271
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + + RG LG +A++D + ++ +P +A R V+ + +F A++D
Sbjct: 272 ATQAQLYGGRGAICLKLGMLDQALEDYHQLIKLDPKNAMGYMARAAVHARKGEFKKALDD 331
Query: 506 LSACVKLDK-----ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
V LD N A+ L SI ++A E KA L
Sbjct: 332 SLESVWLDPISVKTHNSLAWLLATCPLDSIRNGREAFEIAQKACDL 377
>gi|427710394|ref|YP_007052771.1| hypothetical protein Nos7107_5106 [Nostoc sp. PCC 7107]
gi|427362899|gb|AFY45621.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 226
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 98/165 (59%), Gaps = 2/165 (1%)
Query: 374 SKSKSISVDFR--LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+K+ S ++F+ +G+ ++ +G +++A++ FD++++++P + E RG A++ +L
Sbjct: 30 AKTPSSQINFQEYFQQGVQKLEQGNFSAAVTDFDKVVQQNPKFYEGFCLRGLAKSQLGDL 89
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI DF +A+Q NP +A+ RG A LG +AI D + L+ +P S D + RG+
Sbjct: 90 QAAIDDFNQALQLNPQHIDAYNSRGTVYAQLGNLQKAIADFNATLKIDPQSVDAYYNRGL 149
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
FK ++ AA+ D + + L+ + AY GLA ++G+ + A
Sbjct: 150 AYFKQQNPQAAISDFNQAISLNPQLADAYGNRGLAKYTLGDQRNA 194
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 34/194 (17%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + Q AA++DF + +Q NP E + RG A++ LG+ AI D ++AL+ P
Sbjct: 45 QGVQKLEQGNFSAAVTDFDKVVQQNPKFYEGFCLRGLAKSQLGDLQAAIDDFNQALQLNP 104
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
D + RG V + + A+ D +A +K+D ++ AY GLA Y K +
Sbjct: 105 QHIDAYNSRGTVYAQLGNLQKAIADFNATLKIDPQSVDAYYNRGLA------YFKQQ--- 155
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
N + A+ Q + ++ + + AY RGL + LG
Sbjct: 156 -------------------------NPQAAISDFNQAISLNPQLADAYGNRGLAKYTLGD 190
Query: 601 HKKAIKDLSSGLGI 614
+ AI DL I
Sbjct: 191 QRNAIADLQQAAAI 204
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ G +AI F+Q L+ +P + +A RGT A L+ AI+DF ++ +P
Sbjct: 79 RGLAKSQLGDLQAAIDDFNQALQLNPQHIDAYNSRGTVYAQLGNLQKAIADFNATLKIDP 138
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG A AI D ++A+ P AD RG+ + D A+ DL
Sbjct: 139 QSVDAYYNRGLAYFKQQNPQAAISDFNQAISLNPQLADAYGNRGLAKYTLGDQRNAIADL 198
Query: 507 SACVKLDKENKSAYTY 522
+ ++ +Y
Sbjct: 199 QQAAAIFRQQGDTASY 214
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D SRG G AI+ F+ LK DP +A RG A Q+ +AAISDF +
Sbjct: 107 IDAYNSRGTVYAQLGNLQKAIADFNATLKIDPQSVDAYYNRGLAYFKQQNPQAAISDFNQ 166
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
AI NP +A+ RG A+ LG+ AI DL +A
Sbjct: 167 AISLNPQLADAYGNRGLAKYTLGDQRNAIADLQQA 201
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++G+ + +F+AAV D V+ + + + GLA S +G+ + A + +A+QL+
Sbjct: 44 QQGVQKLEQGNFSAAVTDFDKVVQQNPKFYEGFCLRGLAKSQLGDLQAAIDDFNQALQLN 103
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++A+ Y L N +KA+ L ID + AY+ RGL + AI D
Sbjct: 104 PQHIDAYNSRGTVYAQLGNLQKAIADFNATLKIDPQSVDAYYNRGLAYFKQQNPQAAISD 163
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + ++P + R + +G+ R A+
Sbjct: 164 FNQAISLNPQLADAYGNRGLAKYTLGDQRNAI 195
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 51 NWSKAIRILDSLLAQSYEI-QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
N+S A+ D ++ Q+ + + C R SQL + I D ++ALQL+P + AY +
Sbjct: 54 NFSAAVTDFDKVVQQNPKFYEGFCLRGLAKSQLGDLQAAIDDFNQALQLNPQHIDAYNSR 113
Query: 110 GCAFSALGRKEEALS 124
G ++ LG ++A++
Sbjct: 114 GTVYAQLGNLQKAIA 128
>gi|348575498|ref|XP_003473525.1| PREDICTED: tetratricopeptide repeat protein 13-like [Cavia
porcellus]
Length = 792
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 103/183 (56%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG ++F +D+ A ED ++L++
Sbjct: 156 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDFQQSLELNRNQ 214
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 215 PTAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 274
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G +A+K+ L ++P N C Y++ + A+G++
Sbjct: 275 ALLLNQNHVQTLQLRGMMLYHHGSLPEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 334
Query: 637 EAV 639
E +
Sbjct: 335 EGI 337
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 154 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELN 211
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 212 RNQPTAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 271
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + A+++ C++L+ N+ GL+ ++G
Sbjct: 272 FQKALLLNQNHVQTLQLRGMMLYHHGSLPEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 331
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 332 QFYEGIKAQTKVM 344
>gi|254425548|ref|ZP_05039265.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
gi|196187971|gb|EDX82936.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
Length = 274
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 100/191 (52%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ +G A Q +LE AIS + AIQ++P EA++ RG A LG +AI D S AL+
Sbjct: 52 LVEQGRQEAEQGQLEEAISTYNRAIQADPQNAEAYRYRGLAYHDLGNYSQAIDDFSTALQ 111
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F+PN + L+ RG D NAA+ DLS ++L + Y + L+ G++ A
Sbjct: 112 FQPNDPETLYHRGEAYSHTPDINAALSDLSQAIELAPDFVQPYIDRSIILAVTGQFPLAL 171
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
AI L + +A+ + + Y +L N+E AL + + ++A+ RGLL +
Sbjct: 172 SDLDSAISLAPDNADAYYNRGKVYTELGNAEAALTDFGTAIELAPNLAEAFGNRGLLHYQ 231
Query: 598 LGQHKKAIKDL 608
LG AI+DL
Sbjct: 232 LGDSNAAIEDL 242
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 6/229 (2%)
Query: 354 MLKETSNEAK--RNKKFCVTRISKSK----SISVDFRLSRGIAQVNEGKYASAISIFDQI 407
M+ N A+ +KK ++ +S S + + +G + +G+ AIS +++
Sbjct: 16 MMAAVGNRARATEHKKAVYAQLPQSSIHIAVTSTNSLVEQGRQEAEQGQLEEAISTYNRA 75
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ DP EA RG A AI DF+ A+Q P+ E RG+A + +
Sbjct: 76 IQADPQNAEAYRYRGLAYHDLGNYSQAIDDFSTALQFQPNDPETLYHRGEAYSHTPDINA 135
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A+ DLS+A+E P+ +R I+ F A+ DL + + L +N AY G
Sbjct: 136 ALSDLSQAIELAPDFVQPYIDRSIILAVTGQFPLALSDLDSAISLAPDNADAYYNRGKVY 195
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ +G + A AI+L N EA+G+ + L +S A+E LQQ
Sbjct: 196 TELGNAEAALTDFGTAIELAPNLAEAFGNRGLLHYQLGDSNAAIEDLQQ 244
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 11/191 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + G Y+ AI F L+ P PE L RG A + ++ AA+SD ++AI+ P
Sbjct: 89 RGLAYHDLGNYSQAIDDFSTALQFQPNDPETLYHRGEAYSHTPDINAALSDLSQAIELAP 148
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + R A G+ A+ DL A+ P++AD + RG V + + AA+ D
Sbjct: 149 DFVQPYIDRSIILAVTGQFPLALSDLDSAISLAPDNADAYYNRGKVYTELGNAEAALTDF 208
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L A+ GL +G+ A ++ +Q N +A G D +
Sbjct: 209 GTAIELAPNLAEAFGNRGLLHYQLGD----SNAAIEDLQQAANLFQARG-------DQQS 257
Query: 567 SEKALECLQQV 577
++ + +QQV
Sbjct: 258 YQQTVYFIQQV 268
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%)
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ + ++ D +N AY Y GLA +G Y +A + A+Q N E H + Y
Sbjct: 68 AISTYNRAIQADPQNAEAYRYRGLAYHDLGNYSQAIDDFSTALQFQPNDPETLYHRGEAY 127
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ AL L Q + + F + Y R ++L GQ A+ DL S + + P N +
Sbjct: 128 SHTPDINAALSDLSQAIELAPDFVQPYIDRSIILAVTGQFPLALSDLDSAISLAPDNADA 187
Query: 622 LYLRASCYHAIG 633
Y R Y +G
Sbjct: 188 YYNRGKVYTELG 199
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
++ +S++ ++ DF + R I G++ A+S D + P +A RG
Sbjct: 136 ALSDLSQAIELAPDFVQPYIDRSIILAVTGQFPLALSDLDSAISLAPDNADAYYNRGKVY 195
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
EAA++DF AI+ P+ EA+ RG LG+S AI+DL +A A++
Sbjct: 196 TELGNAEAALTDFGTAIELAPNLAEAFGNRGLLHYQLGDSNAAIEDLQQA-------ANL 248
Query: 486 LHERG 490
RG
Sbjct: 249 FQARG 253
>gi|209954827|ref|NP_001129634.1| tetratricopeptide repeat protein 13 precursor [Rattus norvegicus]
Length = 792
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L++
Sbjct: 156 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQ 214
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+A Y GL G K+A EA +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 215 PTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 274
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A G++
Sbjct: 275 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVATGQFY 334
Query: 637 EAV 639
E +
Sbjct: 335 EGI 337
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 154 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 211
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 212 RNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 271
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + A+++ C++L+ N+ GL+ + G
Sbjct: 272 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVATG 331
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 332 QFYEGIKAQTKVM 344
>gi|414076416|ref|YP_006995734.1| TPR repeat-containing serine/threonine protein kinase [Anabaena sp.
90]
gi|413969832|gb|AFW93921.1| TPR repeat-containing serine/threonine protein kinase [Anabaena sp.
90]
Length = 689
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 129/272 (47%), Gaps = 3/272 (1%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F + R++ +I + ++G + +Y A++ +++ + P YP+AL G+G A
Sbjct: 320 FMLNRLNNKNAIEL---YNQGNTLIQLQRYQEALATYEKAIDIKPDYPQALYGQGKALFQ 376
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ + ++ + +AIQ P+ EAW RG L EAI + KAL+ + + I
Sbjct: 377 LKKYQESLIAYDQAIQIQPNYLEAWTNRGFVLVRLKRYSEAIATVDKALQLKNDDPQIWQ 436
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G + K +N A++ + +N + GLA ++ +Y++A A+ K ++L
Sbjct: 437 LKGDIFIKISQYNDAIKAYEQAINFQADNPELWYKKGLAFQNLKQYEEAITAYKKTVELK 496
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ AW +L +L E AL+ Q + ++ S A+ R +L L ++ +AI
Sbjct: 497 PDHESAWYNLGNCLVNLNRYEFALQAYDQAVQYNQNNSAAWLSRSNILMTLRRYSEAIDS 556
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + +P + Y R H + Y EA+
Sbjct: 557 FTQVIKTNPQQYQAWYNRGWALHQVKRYGEAI 588
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 121/244 (49%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY ++ +DQ ++ P Y EA RG + AI+ +A+Q + W+ +
Sbjct: 379 KYQESLIAYDQAIQIQPNYLEAWTNRGFVLVRLKRYSEAIATVDKALQLKNDDPQIWQLK 438
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + + +AI+ +A+ F+ ++ ++ +++G+ K + A+ V+L +
Sbjct: 439 GDIFIKISQYNDAIKAYEQAINFQADNPELWYKKGLAFQNLKQYEEAITAYKKTVELKPD 498
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
++SA+ LG L ++ Y+ A +A+ +A+Q ++N AW + L +A++
Sbjct: 499 HESAWYNLGNCLVNLNRYEFALQAYDQAVQYNQNNSAAWLSRSNILMTLRRYSEAIDSFT 558
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
QV+ + + +A++ RG LH + ++ +AI+ + + ++ Y + + + +Y
Sbjct: 559 QVIKTNPQQYQAWYNRGWALHQVKRYGEAIESYKKAISLKSNDYLVWYNLGNTQYNLQKY 618
Query: 636 REAV 639
+EA+
Sbjct: 619 QEAI 622
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 114/269 (42%), Gaps = 13/269 (4%)
Query: 361 EAKRNKKFCVTRISK-SKSI-SVDFRLS-----------RGIAQVNEGKYASAISIFDQI 407
EA N+ F + R+ + S++I +VD L +G + +Y AI ++Q
Sbjct: 399 EAWTNRGFVLVRLKRYSEAIATVDKALQLKNDDPQIWQLKGDIFIKISQYNDAIKAYEQA 458
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
+ PE +G A ++ E AI+ + + ++ P AW G L
Sbjct: 459 INFQADNPELWYKKGLAFQNLKQYEEAITAYKKTVELKPDHESAWYNLGNCLVNLNRYEF 518
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A+Q +A+++ N++ R + + ++ A++ + +K + + A+ G AL
Sbjct: 519 ALQAYDQAVQYNQNNSAAWLSRSNILMTLRRYSEAIDSFTQVIKTNPQQYQAWYNRGWAL 578
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ Y +A E++ KAI L N W +L +L ++A+ + ++
Sbjct: 579 HQVKRYGEAIESYKKAISLKSNDYLVWYNLGNTQYNLQKYQEAIASYNKATRYKPNHYES 638
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++ +G L Q+++AI + P
Sbjct: 639 WYSKGNAWLNLQQYQQAIASYDKAIEYKP 667
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 38/176 (21%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQL---DPTLLQ 104
SL + +AI+I Q ++ NR F +L+ + I DKALQL DP + Q
Sbjct: 383 SLIAYDQAIQI------QPNYLEAWTNRGFVLVRLKRYSEAIATVDKALQLKNDDPQIWQ 436
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSAD--------------LKQFLELEELL 150
LKG F + + +A+ K YE A++ AD LKQ+ EE +
Sbjct: 437 ---LKGDIFIKISQYNDAI----KAYEQAINFQADNPELWYKKGLAFQNLKQY---EEAI 486
Query: 151 TAAKQDRSV-----TCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSS 201
TA K+ + + Y++ N + +L E L A D+ + ++N++ + + S+
Sbjct: 487 TAYKKTVELKPDHESAWYNLGNCLVNLNRYEFALQAYDQAVQYNQNNSAAWLSRSN 542
>gi|449130250|ref|ZP_21766471.1| hypothetical protein HMPREF9724_01136 [Treponema denticola SP37]
gi|448943089|gb|EMB23982.1| hypothetical protein HMPREF9724_01136 [Treponema denticola SP37]
Length = 329
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 126/240 (52%), Gaps = 1/240 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI + + ++ DP Y EA + RG + E E A++DF + I+ +P +A+ +G
Sbjct: 54 AIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKALADFDKVIELSPQEDKAYYFKGLLF 113
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G +AI++L+ A+ + R + K ++ A+++++A +KL+ + S
Sbjct: 114 NDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGYLKTYDKALDNINAAIKLNSNSASL 173
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL S+ +Y +A + + K+IQ+D N+++++ L Y L +AL+ L + +
Sbjct: 174 YMQKGLLYYSVNKYTEAIKEYEKSIQIDPNYVQSYKGLISIYGILEQDIEALDLLNRAIA 233
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I+ + Y RG +L L ++++AIKD + + ++ N Y+R Y + Y++A+
Sbjct: 234 INPDYI-LYRNRGWILCKLNRYEEAIKDCTKSIKLNHINSISYYIRGLIYLELKLYKKAI 292
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%)
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N S E + G + AI +KA+E +P + RG + + + A+
Sbjct: 31 NYSQAEYFNIAGSTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKALA 90
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++L + AY + GL + G Y KA E AI L+ E + ++ Y L
Sbjct: 91 DFDKVIELSPQEDKAYYFKGLLFNDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGYL 150
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+KAL+ + + ++ + Y +GLL + + ++ +AIK+ + IDP+ ++
Sbjct: 151 KTYDKALDNINAAIKLNSNSASLYMQKGLLYYSVNKYTEAIKEYEKSIQIDPNYVQ 206
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI ++ ++IQ +P+ +++K L + +EA+ L++A+ P+ + RG +
Sbjct: 190 AIKEYEKSIQIDPNYVQSYKGLISIYGILEQDIEALDLLNRAIAINPDYI-LYRNRGWIL 248
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
K + A++D + +KL+ N +Y GL + YKKA E AI+ N
Sbjct: 249 CKLNRYEEAIKDCTKSIKLNHINSISYYIRGLIYLELKLYKKAIEDFDNAIKFITN 304
>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
Length = 810
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 117/224 (52%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+GK AI+ + + ++ +P + +A G A + Q +LE AI+ + +AIQ NP+ +A+
Sbjct: 110 QGKLEEAIAAYQKAIQLNPNFAQAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNFTQAYY 169
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
G A + G+ EAI KA++ PN AD + G+ F + A+ ++LD
Sbjct: 170 NLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGVALFDQGKLDEAIAAYQKAIQLD 229
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ +AY LG AL G+ ++A A+ KAIQL+ N EA+ +L D ++A+
Sbjct: 230 PNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAA 289
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
Q+ + ++ F+ AY+ G L G+ +AI + ++P+
Sbjct: 290 YQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPN 333
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 124/246 (50%), Gaps = 7/246 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A ++GK AI+ + + ++ +P + +A G A + Q +LE AI+ + +AIQ NP+
Sbjct: 138 GNALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPN 197
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G A G+ EAI KA++ +PN A+ + G +K A+
Sbjct: 198 YADAYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQ 257
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY LG+ALS G+ +A A+ KAIQL+ NF A+ L D
Sbjct: 258 KAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKR 317
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
++A+ Q+ + ++ F+ AY+ G L G+ +AI + +DP++ A+
Sbjct: 318 DEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLDPND-------AN 370
Query: 628 CYHAIG 633
Y+ +G
Sbjct: 371 AYNNLG 376
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 126/259 (48%), Gaps = 7/259 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA ++GK AI+ + + ++ +P Y +A G A Q +L+ AI+ + +AIQ +P+
Sbjct: 172 GIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGVALFDQGKLDEAIAAYQKAIQLDPN 231
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A G+ EAI KA++ PN A+ + G+ + A+
Sbjct: 232 DANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQ 291
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY LG ALS G+ +A A+ KAIQL+ NF A+ L D
Sbjct: 292 KAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKR 351
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP------SNI-E 620
++A+ Q+ + +D + AY+ GL L G+ +AI + ++P +N+
Sbjct: 352 DEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGN 411
Query: 621 CLYLRASCYHAIGEYREAV 639
LY + AI Y++A+
Sbjct: 412 ALYSQGKREEAIAAYQKAI 430
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 118/230 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A ++GK AI+ + + ++ +P + A G G A + Q + + AI+ + +AIQ NP+
Sbjct: 274 GVALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPN 333
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A + G+ EAI KA++ +PN A+ + G+ + A+
Sbjct: 334 FALAYNGLGNALSDQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQ 393
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY LG AL S G+ ++A A+ KAIQL+ NF A+ +L D
Sbjct: 394 KAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKR 453
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++A+ Q+ + ++ F+ AY+ G L G+ +AI + ++P+
Sbjct: 454 DEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPN 503
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 5/275 (1%)
Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAIS 402
LS D L + A + K+ + I +D L+ G A +GK AI+
Sbjct: 25 LSQSIDQLFQQGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIA 84
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+ + ++ +P +A G A +Q +LE AI+ + +AIQ NP+ +A+ G A +
Sbjct: 85 AYQKAIQLNPNDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNFAQAYNNLGNALSDQ 144
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ EAI KA++ PN + GI A+ ++L+ AY
Sbjct: 145 GKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYN 204
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG+AL G+ +A A+ KAIQLD N A+ +L E+A+ Q+ + ++
Sbjct: 205 LGVALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNP 264
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++AY+ G+ L G+ +AI + ++P+
Sbjct: 265 NLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN 299
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%), Gaps = 15/240 (6%)
Query: 415 PEALIGRGTARAFQRELEAA-ISDFTEA-------IQSNPSAGEAWKRRGQARAALGESV 466
P ++ + + FQ+ A + +TEA I+ +P+ +A+ G A G+
Sbjct: 21 PSVVLSQSIDQLFQQGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLD 80
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI KA++ PN AD + G + A+ ++L+ AY LG A
Sbjct: 81 EAIAAYQKAIQLNPNDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNFAQAYNNLGNA 140
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
LS G+ ++A A+ KAIQL+ NF +A+ +L D E+A+ Q+ + ++ ++
Sbjct: 141 LSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYAD 200
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE-------CLYLRASCYHAIGEYREAV 639
AY+ G+ L G+ +AI + +DP++ LY + AI Y++A+
Sbjct: 201 AYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAI 260
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 122/250 (48%), Gaps = 5/250 (2%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYP 415
S++ KR++ + K+ ++ +F L+ G A ++GK AI+ + + ++ +P +
Sbjct: 278 SDQGKRDE--AIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPNFA 335
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A G G A + Q + + AI+ + +AIQ +P+ A+ G A G+ EAI KA
Sbjct: 336 LAYNGLGNALSDQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKA 395
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN A + G + A+ ++L+ AY LG ALS G+ +
Sbjct: 396 IQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDE 455
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A A+ KAIQL+ NF A+ +L D +A+ Q+ + ++ F+ AY+ G L
Sbjct: 456 AIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPNFALAYNNLGNAL 515
Query: 596 HGLGQHKKAI 605
G+ +AI
Sbjct: 516 KDQGKLNEAI 525
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 128/269 (47%), Gaps = 13/269 (4%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYP 415
S++ KR++ + K+ ++ +F L+ G A ++GK AI+ + + ++ DP
Sbjct: 312 SDQGKRDE--AIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLDPNDA 369
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A G A Q + + AI+ + +AIQ NP+ A+ G A + G+ EAI KA
Sbjct: 370 NAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKA 429
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN A + G + A+ ++L+ AY LG ALS G+ +
Sbjct: 430 IQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNE 489
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK--------A 587
A + KAIQL+ NF A+ +L +D +A+ Q+ L + + S A
Sbjct: 490 AIATYQKAIQLNPNFALAYNNLGNALKDQGKLNEAIAAYQKALSLPEDTSVTPTTAHTLA 549
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++ GL+ G+ ++A+++ + L IDP
Sbjct: 550 HNNLGLVYQPEGKLEEALREYEAALKIDP 578
>gi|384207605|ref|YP_005593325.1| hypothetical protein Bint_0109 [Brachyspira intermedia PWS/A]
gi|343385255|gb|AEM20745.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 714
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 116/215 (53%), Gaps = 14/215 (6%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI DF AI+ +P+ +A+ RG +++ LG EAI+D ++A+E EP+++D RGI
Sbjct: 14 EEAIEDFNRAIKLDPNNSDAYLNRGISKSDLGNDKEAIEDFNRAIELEPDNSDAYLNRGI 73
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A+ED + ++L+ N+ Y Y GL+ S++ Y++A + + KAI+L N
Sbjct: 74 SKSDLGNDKEAIEDYNKSIELNPYNEEGYIYRGLSKSNLKRYREAIKDYNKAIELVPNDS 133
Query: 552 EAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
E + G+L ++ + + KA+E +I Y RG+ L ++++A
Sbjct: 134 EVYLNRGASKGYLKEYESSINDFNKAIELNPNDEHI-------YFNRGISKFDLKRYREA 186
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I+D + + ++P+ I+ R + + YREA+
Sbjct: 187 IEDYNKAIKLNPNYIDAYINRGASKFDLKRYREAI 221
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 132/247 (53%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RGI++ + G AI F++ ++ +P +A + RG +++ + AI D+ ++
Sbjct: 32 DAYLNRGISKSDLGNDKEAIEDFNRAIELEPDNSDAYLNRGISKSDLGNDKEAIEDYNKS 91
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP E + RG +++ L EAI+D +KA+E PN +++ RG K++ +
Sbjct: 92 IELNPYNEEGYIYRGLSKSNLKRYREAIKDYNKAIELVPNDSEVYLNRGASKGYLKEYES 151
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
++ D + ++L+ ++ Y G++ + Y++A E + KAI+L+ N+++A+ +
Sbjct: 152 SINDFNKAIELNPNDEHIYFNRGISKFDLKRYREAIEDYNKAIKLNPNYIDAYINRGASK 211
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
DL +A+E + + ++ + Y GL L ++ I++ + + ++P+ +
Sbjct: 212 FDLKRYREAIEDFNKAIELNPNANDVYFNLGLSNFNLKKYADVIENFNKVIELNPNYKDA 271
Query: 622 LYLRASC 628
+LR C
Sbjct: 272 YFLRGIC 278
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGI++ + +Y AI +++ +K +P Y +A I RG ++ + AI DF +AI+
Sbjct: 171 FNRGISKFDLKRYREAIEDYNKAIKLNPNYIDAYINRGASKFDLKRYREAIEDFNKAIEL 230
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+A + + G + L + + I++ +K +E PN D RGI + N A+E
Sbjct: 231 NPNANDVYFNLGLSNFNLKKYADVIENFNKVIELNPNYKDAYFLRGICKIYLNNEN-AIE 289
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D + K++++N Y+ L EY+ E+ + + N E W
Sbjct: 290 DFRSFFKINEDNN---IYIITILQLFEEYENIEKLFKFIVDIKNN--ELW 334
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%)
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+ED + +KLD N AY G++ S +G K+A E +AI+L+ + +A+ +
Sbjct: 13 YEEAIEDFNRAIKLDPNNSDAYLNRGISKSDLGNDKEAIEDFNRAIELEPDNSDAYLNRG 72
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
DL N ++A+E + + ++ + Y RGL L ++++AIKD + + + P++
Sbjct: 73 ISKSDLGNDKEAIEDYNKSIELNPYNEEGYIYRGLSKSNLKRYREAIKDYNKAIELVPND 132
Query: 619 IECLYLRASCYHAIGEYREAV 639
E R + + EY ++
Sbjct: 133 SEVYLNRGASKGYLKEYESSI 153
>gi|440755624|ref|ZP_20934826.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440175830|gb|ELP55199.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 971
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 131/257 (50%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ +RG N KY A+S +++ +K +P Y EA + RG + ++ + A+SD+++AI
Sbjct: 679 WYFNRGNLYYNLQKYDLALSDWNKAIKINPNYAEAYVNRGNLYSDLQKYDLALSDYSKAI 738
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
N + A+ RG + A+ D SKA++ PN A+ + RGI+ + + ++ A
Sbjct: 739 DINRNDAVAYYNRGLLYYNQQKYDLALSDYSKAIDINPNDAEAYYNRGILYYNQRKYDLA 798
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D S + ++ AY GL ++ +Y+ A + +AI+++ NF A+ + Y
Sbjct: 799 LSDYSKAIDINPNYAEAYNNRGLLYYNLQKYELALADYNQAIRINPNFALAYNNRGNLYS 858
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
DL + AL + + I++ ++ AY RG+L + ++ A+ D + + I+P+
Sbjct: 859 DLQKYDLALSDYSKAIDINRNYAYAYVNRGVLYYNQQKYDLALSDYNKAIEINPNYAYAY 918
Query: 623 YLRASCYHAIGEYREAV 639
R Y E+ +A+
Sbjct: 919 INRGVVYALTREFPKAL 935
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 83/163 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI N+ KY A+S + + + +P Y EA RG ++ E A++D+ +AI+ N
Sbjct: 784 NRGILYYNQRKYDLALSDYSKAIDINPNYAEAYNNRGLLYYNLQKYELALADYNQAIRIN 843
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG + L + A+ D SKA++ N A RG++ + + ++ A+ D
Sbjct: 844 PNFALAYNNRGNLYSDLQKYDLALSDYSKAIDINRNYAYAYVNRGVLYYNQQKYDLALSD 903
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ ++++ AY G+ + E+ KA KA +L R
Sbjct: 904 YNKAIEINPNYAYAYINRGVVYALTREFPKALADAEKASELYR 946
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N KY A++ ++Q ++ +P + A RG + ++ + A+SD+++AI N
Sbjct: 818 NRGLLYYNLQKYELALADYNQAIRINPNFALAYNNRGNLYSDLQKYDLALSDYSKAIDIN 877
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ RG + A+ D +KA+E PN A RG+V ++F A+ D
Sbjct: 878 RNYAYAYVNRGVLYYNQQKYDLALSDYNKAIEINPNYAYAYINRGVVYALTREFPKALAD 937
Query: 506 LSACVKLDKE--NKSAY 520
+L ++ N++ Y
Sbjct: 938 AEKASELYRQQGNEAGY 954
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITAR----IELAKL-CSLRNWSKAIRILDSLLAQ 65
Y L K + + ++ +R++ A A R +L K +L ++SKAI I + A
Sbjct: 824 YNLQKYELALADYNQAIRINPNFALAYNNRGNLYSDLQKYDLALSDYSKAIDI-NRNYAY 882
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+Y NR Y + + + D +KA++++P AYI +G ++ +AL+
Sbjct: 883 AY-----VNRGVLYYNQQKYDLALSDYNKAIEINPNYAYAYINRGVVYALTREFPKALAD 937
Query: 126 WEKGYEHALHQSADLKQFLELEELLTAAKQDRS 158
EK E Q + + + ++L++ +Q+ S
Sbjct: 938 AEKASE-LYRQQGNEAGYQQAQKLISMIRQEMS 969
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++RG+ N+ KY A+S +++ ++ +P Y A I RG A RE A++D +A
Sbjct: 885 VNRGVLYYNQQKYDLALSDYNKAIEINPNYAYAYINRGVVYALTREFPKALADAEKA 941
>gi|254414040|ref|ZP_05027808.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196179176|gb|EDX74172.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 481
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 141/287 (49%), Gaps = 9/287 (3%)
Query: 291 ASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSK-LS 349
+ V +R GR G H D+ + D+ + + Y+ +S ++ K L+
Sbjct: 170 SPVFDREGRVI-GIHGQGDREAYDA-------IDHQGYTTGQVSVRTGFNAAIPIQKFLA 221
Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
+ + + +N N + +S +++ RG++ + G++ +I+ FDQ ++
Sbjct: 222 MRSQIGQSVANIKVDNTPIATSSVSPTRTNDAQSDYVRGLSHFDMGEWLKSIADFDQAIQ 281
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
+ P Y EA RG AR Q +L +I+D+++AI+ N S +A+ R R+ G+ AI
Sbjct: 282 KQPNYTEAYFYRGLARLQQGDLPGSIADYSQAIRLNSSYADAYYNRAVVRSQSGDQAGAI 341
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
D ++A+ + + A + RG+ +D A+ED S ++++ + Y GLA S
Sbjct: 342 ADYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQALRINPGKANTYYNRGLAYSR 401
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ + ++A + +AI+L+ N+ +A+G+ + L A+ LQQ
Sbjct: 402 LRDDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGELHSAIADLQQ 448
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 89/175 (50%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+I+DF +AIQ P+ EA+ RG AR G+ +I D S+A+ + AD + R +V
Sbjct: 272 SIADFDQAIQKQPNYTEAYFYRGLARLQQGDLPGSIADYSQAIRLNSSYADAYYNRAVVR 331
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ D A+ D + +++D +AY GLA S + + + A E +A++++
Sbjct: 332 SQSGDQAGAIADYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQALRINPGKANT 391
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + Y L + +A+ + + ++ ++KAY RGL LG+ AI DL
Sbjct: 392 YYNRGLAYSRLRDDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGELHSAIADL 446
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + +GE +++I D +A++ +PN + RG+ + D ++ D S ++L+
Sbjct: 259 RGLSHFDMGEWLKSIADFDQAIQKQPNYTEAYFYRGLARLQQGDLPGSIADYSQAIRLNS 318
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AY + S G+ A + +AI++D +F A+ + DL + + A+E
Sbjct: 319 SYADAYYNRAVVRSQSGDQAGAIADYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDF 378
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q L I+ + Y+ RGL L ++AI D + + ++ + + R + +GE
Sbjct: 379 SQALRINPGKANTYYNRGLAYSRLRDDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGE 438
Query: 635 YREAV 639
A+
Sbjct: 439 LHSAI 443
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +R + + G A AI+ + Q ++ D + A RG AR+ + + AI DF++A
Sbjct: 322 DAYYNRAVVRSQSGDQAGAIADYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQA 381
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ NP + RG A + L + AI D ++A+ N A RG+ + + ++
Sbjct: 382 LRINPGKANTYYNRGLAYSRLRDDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGELHS 441
Query: 502 AVEDLSACVKL 512
A+ DL +L
Sbjct: 442 AIADLQQAAQL 452
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 13/194 (6%)
Query: 459 RAALGESVEAIQ------DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
R+ +G+SV I+ S N A + RG+ +F ++ ++ D ++
Sbjct: 223 RSQIGQSVANIKVDNTPIATSSVSPTRTNDAQSDYVRGLSHFDMGEWLKSIADFDQAIQK 282
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
AY Y GLA G+ + + +AI+L+ ++ +A+ + + A+
Sbjct: 283 QPNYTEAYFYRGLARLQQGDLPGSIADYSQAIRLNSSYADAYYNRAVVRSQSGDQAGAIA 342
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY--- 629
Q + ID F+ AY+ RGL L + AI+D S L I+P Y R Y
Sbjct: 343 DYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQALRINPGKANTYYNRGLAYSRL 402
Query: 630 ----HAIGEYREAV 639
AI +Y EA+
Sbjct: 403 RDDRRAIADYTEAI 416
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 20 ICEIDELVRVDSVMASAIT----ARIELA-KLCSLRNWSKAIRILDSLLAQSYEIQDICN 74
I + + +R+DS A+A AR +L + ++ ++S+A+RI + A +Y N
Sbjct: 341 IADYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQALRI-NPGKANTY-----YN 394
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
R YS+L + I D +A++L+ +AY +G AF+ LG A++
Sbjct: 395 RGLAYSRLRDDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGELHSAIA 444
>gi|113478146|ref|YP_724207.1| TPR repeat-containing serine/threonine protein kinase
[Trichodesmium erythraeum IMS101]
gi|110169194|gb|ABG53734.1| serine/threonine protein kinase with TPR repeats [Trichodesmium
erythraeum IMS101]
Length = 746
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 114/227 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+A AI+ + Q++K P + RG AR F + + ++ D+ + I+
Sbjct: 489 LGRGVAYAANNNLQKAIADYTQMIKIKPQKIDGYYRRGRARFFMGDYQGSLDDYNQVIKI 548
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP +A+ RR L E +A D ++A++ P + + R I +++ A+
Sbjct: 549 NPKNEDAYARRCSTYLNLAEYEKAASDCTEAIKIRPKNEVAYNNRCIAYLNLQEYQKAIS 608
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ +N Y GLA + + +KA E + +AI L+ N EA+ + Y +
Sbjct: 609 DCTKRIELEPQNAEGYINRGLAYTEDMQLQKAIEDYTQAIGLNPNKPEAYANRANVYNEQ 668
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
N ++A+ Q + ++ +++AY+ RGL+ +G K AI DL +
Sbjct: 669 KNYQQAIADYVQAIRLNPEYARAYYSRGLVRVNMGDIKGAISDLDTA 715
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 130/274 (47%), Gaps = 4/274 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
V+ ++ SI + +G + +G +AI ++ + +K PE GRG A
Sbjct: 335 VVSFFNRPNSIKAEKVFKQGEERARDGDIPAAILLYSKAIKGFEK-PEYFYGRGNAYYEL 393
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + AISD+T+AI NPS A+ RG +AI D ++ L +P A+ ++
Sbjct: 394 KNYQNAISDYTKAILLNPSNVNAYFNRGVVYFEQQNYPKAINDFTQILRLQPEHAEAYYK 453
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAY-TYL--GLALSSIGEYKKAEEAHLKAIQ 545
RG+V +K +D+ A++D + + L AY YL G+A ++ +KA + + I+
Sbjct: 454 RGLVYYKSQDYLKAIQDYTQVIGLRPNTLDAYNAYLGRGVAYAANNNLQKAIADYTQMIK 513
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ ++ + + + + + +L+ QV+ I+ + AY R L +++KA
Sbjct: 514 IKPQKIDGYYRRGRARFFMGDYQGSLDDYNQVIKINPKNEDAYARRCSTYLNLAEYEKAA 573
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + + I P N R Y + EY++A+
Sbjct: 574 SDCTEAIKIRPKNEVAYNNRCIAYLNLQEYQKAI 607
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA +N +Y AIS + ++ +P E I RG A +L+ AI D+T+AI N
Sbjct: 592 NRCIAYLNLQEYQKAISDCTKRIELEPQNAEGYINRGLAYTEDMQLQKAIEDYTQAIGLN 651
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ R +AI D +A+ P A + RG+V D A+ D
Sbjct: 652 PNKPEAYANRANVYNEQKNYQQAIADYVQAIRLNPEYARAYYSRGLVRVNMGDIKGAISD 711
Query: 506 LSACVKL 512
L +L
Sbjct: 712 LDTAAQL 718
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+A + + AI + Q + +P PEA R Q+ + AI+D+ +AI+
Sbjct: 625 INRGLAYTEDMQLQKAIEDYTQAIGLNPNKPEAYANRANVYNEQKNYQQAIADYVQAIRL 684
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
NP A+ RG R +G+ AI DL A +
Sbjct: 685 NPEYARAYYSRGLVRVNMGDIKGAISDLDTAAQL 718
>gi|397780661|ref|YP_006545133.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
gi|396939163|emb|CCJ36418.1| TPR repeat-containing protein MJ1345 [Methanoculleus bourgensis
MS2]
Length = 627
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 116/258 (44%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A N G+ A++ +D+++ +P EA + RGT A R +AAI +
Sbjct: 189 DAWLTRGHAFRNMGRTTDALACYDRVVTIEPGRIEAWLARGTVLAVDRRYDAAIDCYDRV 248
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I +P AW RG + L +A+ +AL + AD RG K +
Sbjct: 249 IALDPGNANAWYARGTIQVLLSRYGDALDSYDQALAIDSGHADTWSTRGRTLATLKRYEE 308
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
AV + + + GLAL ++ Y++A + + +A + + + W H
Sbjct: 309 AVRSFDRALAVRPGDAETLYNRGLALQNLERYEEAIDCYDRAFRTNPDLAGIWYHKAMAL 368
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ L + AL C + L + + +H +GL+L L +++KAI+ L + +
Sbjct: 369 KRLKRYDLALICFDRALRENAIDPEIWHRKGLVLFNLKRYEKAIECFDQALRLRADHPGA 428
Query: 622 LYLRASCYHAIGEYREAV 639
Y R Y+A+G Y AV
Sbjct: 429 CYYRGESYYALGNYEAAV 446
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 107/250 (42%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ + ++ L+RG + +Y +AI +D+++ DP A RGT +
Sbjct: 210 CYDRVVTIEPGRIEAWLARGTVLAVDRRYDAAIDCYDRVIALDPGNANAWYARGTIQVLL 269
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
A+ + +A+ + + W RG+ A L EA++ +AL P A+ L+
Sbjct: 270 SRYGDALDSYDQALAIDSGHADTWSTRGRTLATLKRYEEAVRSFDRALAVRPGDAETLYN 329
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG+ + + A++ + + + + + +AL + Y A +A++ +
Sbjct: 330 RGLALQNLERYEEAIDCYDRAFRTNPDLAGIWYHKAMALKRLKRYDLALICFDRALRENA 389
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E W +L EKA+EC Q L + A + RG + LG ++ A+ +
Sbjct: 390 IDPEIWHRKGLVLFNLKRYEKAIECFDQALRLRADHPGACYYRGESYYALGNYEAAVANY 449
Query: 609 SSGLGIDPSN 618
+ + P N
Sbjct: 450 QTVVRATPEN 459
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N +Y AI +D+ + +P + A + + A+ F A++ N
Sbjct: 329 NRGLALQNLERYEEAIDCYDRAFRTNPDLAGIWYHKAMALKRLKRYDLALICFDRALREN 388
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
E W R+G L +AI+ +AL + + RG + ++ AAV +
Sbjct: 389 AIDPEIWHRKGLVLFNLKRYEKAIECFDQALRLRADHPGACYYRGESYYALGNYEAAVAN 448
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+ EN A+ G AL + Y++ + +A+++D W + L+
Sbjct: 449 YQTVVRATPENAVAWNNYGNALYRLERYEETLVCYERALEIDPVNRGVWNNKANVLSILS 508
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+ +KAL C Q L + + A+ +GL L LG++ +A+ + L DP+ +E
Sbjct: 509 HYDKALVCYDQELRANPGNADAWCKKGLALFILGRYGEAVTCYARALEADPAKVE 563
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 7/238 (2%)
Query: 363 KRNKKF-----CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
KR K++ C R + +I + +G+ N +Y AI FDQ L+ +P A
Sbjct: 369 KRLKRYDLALICFDRALRENAIDPEIWHRKGLVLFNLKRYEKAIECFDQALRLRADHPGA 428
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
RG + EAA++++ +++ P AW G A L E + +ALE
Sbjct: 429 CYYRGESYYALGNYEAAVANYQTVVRATPENAVAWNNYGNALYRLERYEETLVCYERALE 488
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P + + + + V ++ A+ ++ + N A+ GLAL +G Y +A
Sbjct: 489 IDPVNRGVWNNKANVLSILSHYDKALVCYDQELRANPGNADAWCKKGLALFILGRYGEAV 548
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
+ +A++ D +E W + SE+ALEC + L + + A LRG+ +
Sbjct: 549 TCYARALEADPAKVEIWSMKGNALVIMERSEEALECYNRALAANPDDADA--LRGMTM 604
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 101/254 (39%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +Y A+ FD+ L P E L RG A E AI + A ++N
Sbjct: 295 TRGRTLATLKRYEEAVRSFDRALAVRPGDAETLYNRGLALQNLERYEEAIDCYDRAFRTN 354
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W + A L A+ +AL +I H +G+V F K + A+E
Sbjct: 355 PDLAGIWYHKAMALKRLKRYDLALICFDRALRENAIDPEIWHRKGLVLFNLKRYEKAIEC 414
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L ++ A Y G + ++G Y+ A + ++ AW + L
Sbjct: 415 FDQALRLRADHPGACYYRGESYYALGNYEAAVANYQTVVRATPENAVAWNNYGNALYRLE 474
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+ L C ++ L ID ++ + +L L + KA+ L +P N + +
Sbjct: 475 RYEETLVCYERALEIDPVNRGVWNNKANVLSILSHYDKALVCYDQELRANPGNADAWCKK 534
Query: 626 ASCYHAIGEYREAV 639
+G Y EAV
Sbjct: 535 GLALFILGRYGEAV 548
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 102/245 (41%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A FDQ ++ DP RG A + + A +A++ P +AW R
Sbjct: 135 RYREAAECFDQGIRIDPDCVRLWAARGQALYRLQHYQEAAEYCGQAVKLAPDCADAWLTR 194
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A +G + +A+ + + EP + RG V + ++AA++ + LD
Sbjct: 195 GHAFRNMGRTTDALACYDRVVTIEPGRIEAWLARGTVLAVDRRYDAAIDCYDRVIALDPG 254
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N +A+ G + Y A +++ +A+ +D + W + L E+A+
Sbjct: 255 NANAWYARGTIQVLLSRYGDALDSYDQALAIDSGHADTWSTRGRTLATLKRYEEAVRSFD 314
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ L + ++ + RGL L L ++++AI +P Y +A + Y
Sbjct: 315 RALAVRPGDAETLYNRGLALQNLERYEEAIDCYDRAFRTNPDLAGIWYHKAMALKRLKRY 374
Query: 636 REAVI 640
A+I
Sbjct: 375 DLALI 379
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 87/190 (45%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
E W R+G+A G+ AI+ +AL+ N+A + +G V + A E
Sbjct: 87 EDWCRKGRAYGERGQYDRAIECYDRALKLNANAATAWYHKGRVLNTACRYREAAECFDQG 146
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+++D + + G AL + Y++A E +A++L + +AW ++++ +
Sbjct: 147 IRIDPDCVRLWAARGQALYRLQHYQEAAEYCGQAVKLAPDCADAWLTRGHAFRNMGRTTD 206
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
AL C +V+ I+ +A+ RG +L ++ AI + +DP N Y R +
Sbjct: 207 ALACYDRVVTIEPGRIEAWLARGTVLAVDRRYDAAIDCYDRVIALDPGNANAWYARGTIQ 266
Query: 630 HAIGEYREAV 639
+ Y +A+
Sbjct: 267 VLLSRYGDAL 276
>gi|395531632|ref|XP_003767879.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2
[Sarcophilus harrisii]
Length = 806
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG ++F +D+ A ED ++L+K
Sbjct: 171 QILSPLGRISEAVSDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDFQQSLELNKNQ 229
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQR 289
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A+G +
Sbjct: 290 ALILNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGHFY 349
Query: 637 EAV 639
E +
Sbjct: 350 EGI 352
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V+ ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 182 AVSDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 241
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + +AL N L
Sbjct: 242 HRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQRALILNQNHVQTL 301
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G + + +A K +
Sbjct: 302 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGHFYEGIKAQTKVM 359
>gi|383774716|ref|YP_005453785.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
gi|381362843|dbj|BAL79673.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
Length = 461
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 5/210 (2%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP E+ RG QR L+ A++D+ +AI+ P +AW RG G++ +A++
Sbjct: 137 DPQDAESYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVTYYLGGDNEKAVR 196
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
DLS+AL +PN RG K + AV D ++LD + Y GL+L+++
Sbjct: 197 DLSEALRLDPNRPRSYTNRGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLSLAAM 256
Query: 531 GEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
GEY KA + +A++L NF G +L AL + L +D F++ Y
Sbjct: 257 GEYDKAIADYDQALRLAPRPNFFTNRGDSYHLKGELG---AALSDYESALKLDPNFAQTY 313
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ R +L +G+ +KA+ D + L +DP N
Sbjct: 314 NNRAVLYKKMGERRKALADYETALRLDPGN 343
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
G +A++D+ +A+ + +A RG ++ D N A DLS ++LD ++ +Y
Sbjct: 86 GGLTQALRDIDRAIALDGRNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQDAESYE 145
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G+ ++ +A + +AI+L + +AW Y ++EKA+ L + L +D
Sbjct: 146 LRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVTYYLGGDNEKAVRDLSEALRLD 205
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++Y RG LGQ KA+ D + +DP E R A+GEY +A+
Sbjct: 206 PNRPRSYTNRGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAI 263
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ A++ + ++ DP PE RG + A E + AI+D+ +A++
Sbjct: 214 NRGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLA 273
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG + GE A+ D AL+ +PN A + R ++ K + A+ D
Sbjct: 274 PRP-NFFTNRGDSYHLKGELGAALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALAD 332
Query: 506 LSACVKLDKENKSA 519
++LD N +A
Sbjct: 333 YETALRLDPGNDNA 346
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG++ G+Y AI+ +DQ L+ P P RG + + EL AA+SD+ A++ +
Sbjct: 248 NRGLSLAAMGEYDKAIADYDQALRLAPR-PNFFTNRGDSYHLKGELGAALSDYESALKLD 306
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
P+ + + R +GE +A+ D AL +P + + + R + + F A
Sbjct: 307 PNFAQTYNNRAVLYKKMGERRKALADYETALRLDPGNDNAANGRRAMIAEIAKFGA 362
>gi|434402232|ref|YP_007145117.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428256487|gb|AFZ22437.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 537
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 125/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ + + G + AI+ FD L+ P + A RG + AI+D+ +AI+ N
Sbjct: 82 SRGLGRFDRGDHQGAIADFDSSLEWYPNFVAAYSNRGNIFYILGKYSDAIADYDQAIRLN 141
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG R AL + AI D +++LE PN + + RG+ K + A+ D
Sbjct: 142 PNFAPAYHNRGNTRYALEDYPGAIADYNRSLEINPNFGEAYYSRGLFFSHLKKYEKAIAD 201
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+A +KL+ ++ AY GL S++G+ +KA + +A+Q + +G L
Sbjct: 202 FNAALKLNPDDVQAYYERGLVYSALGDDQKAIADYNQALQENPTLALVYGFRANARHRLG 261
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+ ++L ++ ++ Y R LG ++ AI+D + L I+ + Y R
Sbjct: 262 DYQGAIADSNRLLQLNPNLAEGYCDRAAARRALGDYQGAIQDYNRALQINVNLAFAYYGR 321
Query: 626 ASCYHAIGEYREAV 639
A+ +++ A+
Sbjct: 322 GIAREALKDFQGAI 335
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 136/274 (49%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++S I+ +F SRG+ + KY AI+ F+ LK +P +A RG
Sbjct: 164 AIADYNRSLEINPNFGEAYYSRGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERGLVY 223
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + + AI+D+ +A+Q NP+ + R AR LG+ AI D ++ L+ PN A+
Sbjct: 224 SALGDDQKAIADYNQALQENPTLALVYGFRANARHRLGDYQGAIADSNRLLQLNPNLAEG 283
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+R D+ A++D + ++++ AY G+A ++ +++ A E + AI+
Sbjct: 284 YCDRAAARRALGDYQGAIQDYNRALQINVNLAFAYYGRGIAREALKDFQGAIEDNTLAIE 343
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ F A+ + + L + + A+ Q L I+ +AY+ RG + L +++ AI
Sbjct: 344 IAPEFAPAYCNRGNARRLLGDEQGAIADYSQALQINPDLIEAYYNRGSTRYALEEYEGAI 403
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + L I+P + RA+ Y+A+ +Y A+
Sbjct: 404 ADFTQALQINPDSAPFYSDRANAYYALEDYPAAI 437
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 6/233 (2%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
M E LI +G + Q + AI+ + EA++ NP A+ RGQA AL E EAI +
Sbjct: 1 MNAEDLINQGLNKDLQGDYLGAIALYNEALRLNPCLALAFYHRGQAYFALSEYSEAIANY 60
Query: 473 SKALE------FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
+A+E + A H RG+ F D A+ D + ++ +AY+ G
Sbjct: 61 RQAIEHKLTQNINFDIAKAYHSRGLGRFDRGDHQGAIADFDSSLEWYPNFVAAYSNRGNI 120
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+G+Y A + +AI+L+ NF A+ + L + A+ + L I+ F +
Sbjct: 121 FYILGKYSDAIADYDQAIRLNPNFAPAYHNRGNTRYALEDYPGAIADYNRSLEINPNFGE 180
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY+ RGL L +++KAI D ++ L ++P +++ Y R Y A+G+ ++A+
Sbjct: 181 AYYSRGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERGLVYSALGDDQKAI 233
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 34/279 (12%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY+ AI+ +DQ ++ +P + A RG R + AI+D+ +++ NP+ GEA+
Sbjct: 125 GKYSDAIADYDQAIRLNPNFAPAYHNRGNTRYALEDYPGAIADYNRSLEINPNFGEAYYS 184
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN--------------------- 493
RG + L + +AI D + AL+ P+ +ERG+V
Sbjct: 185 RGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERGLVYSALGDDQKAIADYNQALQENP 244
Query: 494 -----FKFK--------DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ F+ D+ A+ D + ++L+ Y A ++G+Y+ A + +
Sbjct: 245 TLALVYGFRANARHRLGDYQGAIADSNRLLQLNPNLAEGYCDRAAARRALGDYQGAIQDY 304
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+A+Q++ N A+ + L + + A+E + I F+ AY RG LG
Sbjct: 305 NRALQINVNLAFAYYGRGIAREALKDFQGAIEDNTLAIEIAPEFAPAYCNRGNARRLLGD 364
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI D S L I+P IE Y R S +A+ EY A+
Sbjct: 365 EQGAIADYSQALQINPDLIEAYYNRGSTRYALEEYEGAI 403
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 110/222 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R A+ G Y AI +++ L+ + A GRG AR ++ + AI D T AI+ P
Sbjct: 287 RAAARRALGDYQGAIQDYNRALQINVNLAFAYYGRGIAREALKDFQGAIEDNTLAIEIAP 346
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG AR LG+ AI D S+AL+ P+ + + RG + +++ A+ D
Sbjct: 347 EFAPAYCNRGNARRLLGDEQGAIADYSQALQINPDLIEAYYNRGSTRYALEEYEGAIADF 406
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++++ ++ Y+ A ++ +Y A + +AI LD++ E W + + L N
Sbjct: 407 TQALQINPDSAPFYSDRANAYYALEDYPAAIADYNQAIVLDQSCAEDWFNRGRSRSLLGN 466
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E AL L Q L + ++ AY LR + LGQ + AI D
Sbjct: 467 LEGALTDLNQALQLQPDWATAYILRADVHRNLGQEENAIADF 508
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 34/287 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G AI+ ++Q L+E+P R AR + + AI+D +Q NP
Sbjct: 219 RGLVYSALGDDQKAIADYNQALQENPTLALVYGFRANARHRLGDYQGAIADSNRLLQLNP 278
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ E + R AR ALG+ AIQD ++AL+ N A + RGI KDF A+ED
Sbjct: 279 NLAEGYCDRAAARRALGDYQGAIQDYNRALQINVNLAFAYYGRGIAREALKDFQGAIEDN 338
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------------ 554
+ +++ E AY G A +G+ + A + +A+Q++ + +EA+
Sbjct: 339 TLAIEIAPEFAPAYCNRGNARRLLGDEQGAIADYSQALQINPDLIEAYYNRGSTRYALEE 398
Query: 555 -----GHLTQ----------FYQDLANSEKALE-------CLQQVLYIDKRFSKAYHLRG 592
TQ FY D AN+ ALE Q + +D+ ++ + RG
Sbjct: 399 YEGAIADFTQALQINPDSAPFYSDRANAYYALEDYPAAIADYNQAIVLDQSCAEDWFNRG 458
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG + A+ DL+ L + P LRA + +G+ A+
Sbjct: 459 RSRSLLGNLEGALTDLNQALQLQPDWATAYILRADVHRNLGQEENAI 505
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 124/267 (46%), Gaps = 24/267 (8%)
Query: 297 HGRQTNGTHDVHDKLSS--DSASLNDSNTN-SESY-----SKSSISDNKSSDSTESRS-- 346
+G + N H + D + DS L N N +E Y ++ ++ D + + +R+
Sbjct: 250 YGFRANARHRLGDYQGAIADSNRLLQLNPNLAEGYCDRAAARRALGDYQGAIQDYNRALQ 309
Query: 347 ---KLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASA 400
L+F + + + EA ++ + + + + I+ +F + RG A+ G A
Sbjct: 310 INVNLAFAY-YGRGIAREALKDFQGAIEDNTLAIEIAPEFAPAYCNRGNARRLLGDEQGA 368
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ + Q L+ +P EA RG+ R E E AI+DFT+A+Q NP + + R A
Sbjct: 369 IADYSQALQINPDLIEAYYNRGSTRYALEEYEGAIADFTQALQINPDSAPFYSDRANAYY 428
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
AL + AI D ++A+ + + A+ RG + A+ DL+ ++L + +AY
Sbjct: 429 ALEDYPAAIADYNQAIVLDQSCAEDWFNRGRSRSLLGNLEGALTDLNQALQLQPDWATAY 488
Query: 521 TY-------LGLALSSIGEYKKAEEAH 540
LG ++I ++++A E +
Sbjct: 489 ILRADVHRNLGQEENAIADFQQAAELY 515
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 90/456 (19%), Positives = 177/456 (38%), Gaps = 64/456 (14%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++ +AIR L+ A +Y NR LE + I D +++L+++P +AY
Sbjct: 130 AIADYDQAIR-LNPNFAPAYH-----NRGNTRYALEDYPGAIADYNRSLEINPNFGEAYY 183
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSAD-LKQFLELEELLTAAKQDRSVTCEYDVS 166
+G FS L + E+A++ + AL + D ++ + E + +A D+ +Y+ +
Sbjct: 184 SRGLFFSHLKKYEKAIA----DFNAALKLNPDDVQAYYERGLVYSALGDDQKAIADYNQA 239
Query: 167 NSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSD 226
+ G AN + H D + + S + + +P+L G D
Sbjct: 240 LQENPTLALVYGFRANAR-------HRLGDYQGAIADSNRLLQL------NPNLAEGYCD 286
Query: 227 EAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNG 286
A ++ G + +++N + + + + I R++ DF
Sbjct: 287 RAAARRAL----------GDYQGAIQDYNRALQINVNLAFAYYGRGIAREALKDF----- 331
Query: 287 PIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRS 346
G + T + A N N ++ + D + + + S++
Sbjct: 332 ----------QGAIEDNTLAIEIAPEFAPAYCNRGN------ARRLLGDEQGAIADYSQA 375
Query: 347 KLSFKWDMLKETSNE-----AKRNKKFCVTRISKSKSISVD---FRLSRGIAQVNEGKYA 398
L D+++ N A + + +++ I+ D F R A Y
Sbjct: 376 -LQINPDLIEAYYNRGSTRYALEEYEGAIADFTQALQINPDSAPFYSDRANAYYALEDYP 434
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+AI+ ++Q + D E RG +R+ LE A++D +A+Q P A+ R
Sbjct: 435 AAIADYNQAIVLDQSCAEDWFNRGRSRSLLGNLEGALTDLNQALQLQPDWATAYILRADV 494
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
LG+ AI D +A E + + R I+N
Sbjct: 495 HRNLGQEENAIADFQQAAELYHQQGNTQYYRQILNL 530
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 15/135 (11%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEI- 69
Y L K I + D+ +R++ A A R +L ++ AI + +S EI
Sbjct: 122 YILGKYSDAIADYDQAIRLNPNFAPAYHNRGN--TRYALEDYPGAIADYN----RSLEIN 175
Query: 70 ----QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+ +R +S L+ ++ I D + AL+L+P +QAY +G +SALG ++A++
Sbjct: 176 PNFGEAYYSRGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERGLVYSALGDDQKAIA- 234
Query: 126 WEKGYEHALHQSADL 140
Y AL ++ L
Sbjct: 235 ---DYNQALQENPTL 246
>gi|411119879|ref|ZP_11392255.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410710035|gb|EKQ67546.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 467
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 126/255 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRGIA N G Y SAI+ +D+ +K P + +A RG A EAA+ + ++++
Sbjct: 82 SRGIALFNLGSYDSAIASYDKAIKLRPTFHQAWFNRGNALDKLGCYEAALESYDKSLEIE 141
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P ++W RG + L +AI KA+EF P+ ++ + R + + K ++ A+E
Sbjct: 142 PDYSKSWYNRGITLSKLERYDDAIASYDKAIEFRPHYSNAWYNRANILHRQKRYSEALES 201
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + + A+ LG L +G +++A ++ +A+++ F AW + L
Sbjct: 202 YERVLSIKPDWHGAWYNLGNILHKLGRHEEAVASYNRALKIVPKFYGAWYNRGNALDALG 261
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+E ++ L I +A++ G L+ ++++AI + +DP + R
Sbjct: 262 RYDEAIESYRRALEIKPNLREAWYNWGSTLYKASRYEEAIASYDQAIRLDPKFAKAWSSR 321
Query: 626 ASCYHAIGEYREAVI 640
+ + +G Y EA+I
Sbjct: 322 GTAFRKLGMYAEAII 336
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 118/253 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A +Y A+ F+Q + YPEAL RG A ++AI+ + +AI+ P
Sbjct: 49 KGMALCELQRYEEAVQSFNQAIDLRADYPEALNSRGIALFNLGSYDSAIASYDKAIKLRP 108
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +AW RG A LG A++ K+LE EP+ + + RGI K + ++ A+
Sbjct: 109 TFHQAWFNRGNALDKLGCYEAALESYDKSLEIEPDYSKSWYNRGITLSKLERYDDAIASY 168
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ +A+ L Y +A E++ + + + ++ AW +L L
Sbjct: 169 DKAIEFRPHYSNAWYNRANILHRQKRYSEALESYERVLSIKPDWHGAWYNLGNILHKLGR 228
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A+ + L I +F A++ RG L LG++ +AI+ L I P+ E Y
Sbjct: 229 HEEAVASYNRALKIVPKFYGAWYNRGNALDALGRYDEAIESYRRALEIKPNLREAWYNWG 288
Query: 627 SCYHAIGEYREAV 639
S + Y EA+
Sbjct: 289 STLYKASRYEEAI 301
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 2/268 (0%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEG-KYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+S+ +F L +GI Q++ G Y AI F++ L+ P + E +G A +
Sbjct: 1 MSRKPDSEAEFYLHQGI-QLSHGCAYEDAIMSFERALQSSPTWHEPWYFKGMALCELQRY 59
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ F +AI EA RG A LG AI KA++ P RG
Sbjct: 60 EEAVQSFNQAIDLRADYPEALNSRGIALFNLGSYDSAIASYDKAIKLRPTFHQAWFNRGN 119
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K + AA+E ++++ + ++ G+ LS + Y A ++ KAI+ ++
Sbjct: 120 ALDKLGCYEAALESYDKSLEIEPDYSKSWYNRGITLSKLERYDDAIASYDKAIEFRPHYS 179
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
AW + +ALE ++VL I + A++ G +LH LG+H++A+ +
Sbjct: 180 NAWYNRANILHRQKRYSEALESYERVLSIKPDWHGAWYNLGNILHKLGRHEEAVASYNRA 239
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P Y R + A+G Y EA+
Sbjct: 240 LKIVPKFYGAWYNRGNALDALGRYDEAI 267
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 7/250 (2%)
Query: 380 SVDFRLSRGIAQVN-------EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+++FR A N + +Y+ A+ ++++L P + A G E
Sbjct: 171 AIEFRPHYSNAWYNRANILHRQKRYSEALESYERVLSIKPDWHGAWYNLGNILHKLGRHE 230
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A++ + A++ P AW RG A ALG EAI+ +ALE +PN + + G
Sbjct: 231 EAVASYNRALKIVPKFYGAWYNRGNALDALGRYDEAIESYRRALEIKPNLREAWYNWGST 290
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+K + A+ ++LD + A++ G A +G Y +A ++ KA+Q + E
Sbjct: 291 LYKASRYEEAIASYDQAIRLDPKFAKAWSSRGTAFRKLGMYAEAIISYDKAVQHQPDLYE 350
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
AW L ++E A+ + I+ F A++ RG+ L LG + AI L
Sbjct: 351 AWYGRGIALGHLGHNEAAVASYDHAVAINPDFYPAWYSRGVALGHLGDYDAAITSYDQAL 410
Query: 613 GIDPSNIECL 622
I+P+ E +
Sbjct: 411 QINPNFPEAV 420
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 3/268 (1%)
Query: 375 KSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
KS I D+ S RGI +Y AI+ +D+ ++ P Y A R Q+
Sbjct: 136 KSLEIEPDYSKSWYNRGITLSKLERYDDAIASYDKAIEFRPHYSNAWYNRANILHRQKRY 195
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+ + + P AW G LG EA+ ++AL+ P + RG
Sbjct: 196 SEALESYERVLSIKPDWHGAWYNLGNILHKLGRHEEAVASYNRALKIVPKFYGAWYNRGN 255
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ A+E +++ + A+ G L Y++A ++ +AI+LD F
Sbjct: 256 ALDALGRYDEAIESYRRALEIKPNLREAWYNWGSTLYKASRYEEAIASYDQAIRLDPKFA 315
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+AW ++ L +A+ + + +A++ RG+ L LG ++ A+
Sbjct: 316 KAWSSRGTAFRKLGMYAEAIISYDKAVQHQPDLYEAWYGRGIALGHLGHNEAAVASYDHA 375
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ I+P Y R +G+Y A+
Sbjct: 376 VAINPDFYPAWYSRGVALGHLGDYDAAI 403
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 51/107 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A G YA AI +D+ ++ P EA GRG A EAA++ + A+ N
Sbjct: 320 SRGTAFRKLGMYAEAIISYDKAVQHQPDLYEAWYGRGIALGHLGHNEAAVASYDHAVAIN 379
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
P AW RG A LG+ AI +AL+ PN + + R +
Sbjct: 380 PDFYPAWYSRGVALGHLGDYDAAITSYDQALQINPNFPEAVSRRNLA 426
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y AI+ +DQ ++ DP + +A RGTA R EA IS + +A+Q P EAW
Sbjct: 296 RYEEAIASYDQAIRLDPKFAKAWSSRGTAFRKLGMYAEAIIS-YDKAVQHQPDLYEAWYG 354
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG + A+ A+ P+ + RG+ D++AA+ ++++
Sbjct: 355 RGIALGHLGHNEAAVASYDHAVAINPDFYPAWYSRGVALGHLGDYDAAITSYDQALQINP 414
Query: 515 ENKSAYTYLGLALS 528
A + LAL+
Sbjct: 415 NFPEAVSRRNLALN 428
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 162/416 (38%), Gaps = 59/416 (14%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
LC L+ + +A++ + + + + N R L + I DKA++L PT Q
Sbjct: 53 LCELQRYEEAVQSFNQAIDLRADYPEALNSRGIALFNLGSYDSAIASYDKAIKLRPTFHQ 112
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYD 164
A+ +G A LG E AL ++K LE+E + + +R +T
Sbjct: 113 AWFNRGNALDKLGCYEAALESYDKS--------------LEIEPDYSKSWYNRGIT---- 154
Query: 165 VSNSMSSLTVSESGLNANDKMSETSEN-----HNKSDICDSSSQSRDVSETCSKS-SHDP 218
+S L + + + DK E + +N+++I + + E+ + S P
Sbjct: 155 ----LSKLERYDDAIASYDKAIEFRPHYSNAWYNRANILHRQKRYSEALESYERVLSIKP 210
Query: 219 D-------LCN-----GRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDG----SK 262
D L N GR +EA V L I K N + D +
Sbjct: 211 DWHGAWYNLGNILHKLGRHEEA-----VASYNRALKIVPKFYGAWYNRGNALDALGRYDE 265
Query: 263 STHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSN 322
+ + R A EI + + + KAS E + + K + +S +
Sbjct: 266 AIESYRRALEIKPNLREAWYNWGSTLYKASRYEEAIASYDQAIRLDPKFAKAWSSRGTAF 325
Query: 323 TNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVD 382
Y+++ IS +K + + + L W N+ V + +I+ D
Sbjct: 326 RKLGMYAEAIISYDK---AVQHQPDLYEAWYGRGIALGHLGHNEA-AVASYDHAVAINPD 381
Query: 383 FR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF--QRELEA 433
F SRG+A + G Y +AI+ +DQ L+ +P +PEA+ R A + Q EL A
Sbjct: 382 FYPAWYSRGVALGHLGDYDAAITSYDQALQINPNFPEAVSRRNLALNYTSQPELSA 437
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA + G +A++ +D + +P + A RG A + +AAI+ + +A+Q NP
Sbjct: 355 RGIALGHLGHNEAAVASYDHAVAINPDFYPAWYSRGVALGHLGDYDAAITSYDQALQINP 414
Query: 447 SAGEAWKRRGQARAALGE---SVEAIQDLSKALEFEPNSADI 485
+ EA RR A + S + D LE P+S+DI
Sbjct: 415 NFPEAVSRRNLALNYTSQPELSADREDDPQNELELLPDSSDI 456
>gi|449125236|ref|ZP_21761538.1| hypothetical protein HMPREF9723_01582 [Treponema denticola OTK]
gi|448939205|gb|EMB20122.1| hypothetical protein HMPREF9723_01582 [Treponema denticola OTK]
Length = 329
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 126/240 (52%), Gaps = 1/240 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI + + ++ DP Y EA + RG + E E A++DF + I+ +P +A+ +G
Sbjct: 54 AIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKALADFDKVIELSPQEDKAYYFKGLLF 113
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G +AI++L+ A+ + R + K ++ A+++++A +KL+ + S
Sbjct: 114 NDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGYLKTYDKALDNINAAIKLNSNSASL 173
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL S+ +Y +A + + K+IQ+D N+++++ L Y L +AL+ L + +
Sbjct: 174 YMQKGLLYYSVNKYTEAIKEYEKSIQIDPNYVQSYKCLISIYGILEQDIEALDLLNRAIA 233
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I+ + Y RG +L L ++++AIKD + + ++ N Y+R Y + Y++A+
Sbjct: 234 INPDYI-LYRNRGWILCKLNRYEEAIKDCTKSIKLNHINSISYYIRGLIYLELKLYKKAI 292
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N S E + G + AI +KA+E +P + RG + + + A+
Sbjct: 31 NYSQAEYFNMAGSTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKALA 90
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++L + AY + GL + G Y KA E AI L+ E + ++ Y L
Sbjct: 91 DFDKVIELSPQEDKAYYFKGLLFNDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGYL 150
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE---C 621
+KAL+ + + ++ + Y +GLL + + ++ +AIK+ + IDP+ ++ C
Sbjct: 151 KTYDKALDNINAAIKLNSNSASLYMQKGLLYYSVNKYTEAIKEYEKSIQIDPNYVQSYKC 210
Query: 622 L 622
L
Sbjct: 211 L 211
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI ++ ++IQ +P+ +++K L + +EA+ L++A+ P+ + RG +
Sbjct: 190 AIKEYEKSIQIDPNYVQSYKCLISIYGILEQDIEALDLLNRAIAINPDYI-LYRNRGWIL 248
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
K + A++D + +KL+ N +Y GL + YKKA E AI+ N
Sbjct: 249 CKLNRYEEAIKDCTKSIKLNHINSISYYIRGLIYLELKLYKKAIEDFDNAIKFITN 304
>gi|296531396|ref|NP_001116307.2| tetratricopeptide repeat protein 13 isoform b [Homo sapiens]
Length = 806
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A+G++
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 349
Query: 637 EAV 639
E +
Sbjct: 350 EGI 352
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 169 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 226
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 227 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 286
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + A+++ C++L+ N+ GL+ ++G
Sbjct: 287 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 346
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 347 QFYEGIKAQTKVM 359
>gi|114573142|ref|XP_001149277.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Pan
troglodytes]
Length = 806
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A+G++
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 349
Query: 637 EAV 639
E +
Sbjct: 350 EGI 352
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 169 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 226
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 227 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 286
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + A+++ C++L+ N+ GL+ ++G
Sbjct: 287 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 346
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 347 QFYEGIKAQTKVM 359
>gi|452210866|ref|YP_007490980.1| GTP cyclohydrolase III (methanopterin) [Methanosarcina mazei Tuc01]
gi|452100768|gb|AGF97708.1| GTP cyclohydrolase III (methanopterin) [Methanosarcina mazei Tuc01]
Length = 398
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 114/227 (50%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ +D +LKE+ Y EA G+G A + AI + +A++ +P EAW
Sbjct: 167 GRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYY 226
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G +LG +A++ KA+E +P + D + GI + ++ A+ ++++
Sbjct: 227 KGVDLDSLGSFKQALKAYEKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAIEINS 286
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G LS + + +A EA+ KA+QLD +LEA+ L L E+AL+
Sbjct: 287 ENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIY 346
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
++ L +D + ++ + + L LG+ ++A + IDP E
Sbjct: 347 EKALKLDPEAADSWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEI 393
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 113/244 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ + + L P YP A G+ + E A+ + ++ N + EAW
Sbjct: 133 GEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDAYDIVLKENSNYKEAWAG 192
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A +G EAI KALE +P + + +G+ F A++ V++D
Sbjct: 193 KGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEIDP 252
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN A+ +G+ L ++ Y +A A KAI+++ + W + + ++A+E
Sbjct: 253 ENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAY 312
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ + +D + +AY G +L L + ++A+ L +DP + + +A C +G
Sbjct: 313 RKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAADSWFGKAVCLSYLGR 372
Query: 635 YREA 638
EA
Sbjct: 373 EEEA 376
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 116/245 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI F++ + +DP L + A E A+ + EA++ N + W
Sbjct: 65 GKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVKINSEDADLWNN 124
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ + +GE +A++ KAL+ +P+ + + + + + + AV+ +K +
Sbjct: 125 MAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDAYDIVLKENS 184
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
K A+ G+AL +G Y +A A+ KA+++D FLEAW + L + ++AL+
Sbjct: 185 NYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAY 244
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ + ID A++ G+ L L ++ +AI + I+ N + Y + +
Sbjct: 245 EKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQR 304
Query: 635 YREAV 639
+ EAV
Sbjct: 305 FDEAV 309
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+GIA G Y AI +D+ L+ DP + EA +G + A+ + +A++ +
Sbjct: 192 GKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEID 251
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW G L EAI KA+E ++D+ + +G + + F+ AVE
Sbjct: 252 PENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEA 311
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+LD E AY+ LG L+ + +++A + + KA++LD ++W L
Sbjct: 312 YRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAADSWFGKAVCLSYLG 371
Query: 566 NSEKALECLQQVLYIDKRFSK 586
E+A + ++ + ID R+++
Sbjct: 372 REEEAEDAYRKAVEIDPRYAE 392
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L + +AI + + + E D+ N+ F SQ++ + KA+QLDP L+
Sbjct: 265 LENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLE 324
Query: 105 AYILKGCAFSALGRKEEALSVWEK 128
AY G + L R EEAL ++EK
Sbjct: 325 AYSSLGFVLAQLKRFEEALDIYEK 348
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 76/188 (40%), Gaps = 34/188 (18%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+E G+ + +N A+ + D N AL S+G +++A + + +A++
Sbjct: 54 LNECGLDLLRLGKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVK 113
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVL-----YIDKRFSKAYHL---------- 590
++ + W ++ Y + EKA+E + L Y + + KA +L
Sbjct: 114 INSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAV 173
Query: 591 -------------------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+G+ L +G + +AI L IDP +E Y + +
Sbjct: 174 DAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDS 233
Query: 632 IGEYREAV 639
+G +++A+
Sbjct: 234 LGSFKQAL 241
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D ++G ++ A+ + + ++ DP Y EA G A + E A+ + +A
Sbjct: 290 DVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKA 349
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
++ +P A ++W + + LG EA KA+E +P A+I
Sbjct: 350 LKLDPEAADSWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEI 393
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
+ Q+ + I DKAL++DP L+A+ KG +LG ++AL +EK E
Sbjct: 191 AGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVE 249
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
RL K ++ I ++ + D + + A L SL + +A+++ + + E D
Sbjct: 63 RLGKYNEAIIAFEKAIDKDPGNIYLLNNKA--AALESLGRFEEALKLYQEAVKINSEDAD 120
Query: 72 ICNR-AFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
+ N AF YSQ+ ++ + KAL L P A+ K S GR EEA+ Y
Sbjct: 121 LWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDA----Y 176
Query: 131 EHALHQSADLKQ 142
+ L ++++ K+
Sbjct: 177 DIVLKENSNYKE 188
>gi|334121332|ref|ZP_08495403.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333455148|gb|EGK83806.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 1075
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 117/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ + G AI+ F++ L+ DP + A G G AI+ F +A++ +
Sbjct: 187 NQGVERYYAGNLKGAIAAFEKALEIDPKFHHAWNGLGAPLNDLGRNSEAIAAFEKALEID 246
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW G ALG + EAI KALE +P H GI + A+
Sbjct: 247 PKEHIAWHGLGITLNALGRNSEAIAAFEKALEIDPKEHIAWHGLGITLNALGRNSEAIAA 306
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++D + A+ LG AL+++G +A A KA+++D F AW L DL
Sbjct: 307 FEKALEIDPKAHIAWKGLGNALNALGRNSEAIAAFKKALEIDPKFHHAWNGLGAPLNDLG 366
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+A+ ++ L ID +F A+H G +L+ LG++ +AI L IDP
Sbjct: 367 RYSEAIAAFEKALEIDPKFHFAWHGLGNVLNALGRYSEAIAVYEKALEIDPKFHFAWNGL 426
Query: 626 ASCYHAIGEYREAV 639
+ +G Y EA+
Sbjct: 427 GNALGELGRYSEAI 440
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 139/318 (43%), Gaps = 15/318 (4%)
Query: 307 VHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNK 366
H + A LND NSE+ + + E K W L T N RN
Sbjct: 215 FHHAWNGLGAPLNDLGRNSEAIAAFE-------KALEIDPKEHIAWHGLGITLNALGRNS 267
Query: 367 KFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
+ + K+ I ++ GI G+ + AI+ F++ L+ DP A G G
Sbjct: 268 E-AIAAFEKALEIDPKEHIAWHGLGITLNALGRNSEAIAAFEKALEIDPKAHIAWKGLGN 326
Query: 424 A-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
A A R EA I+ F +A++ +P AW G LG EAI KALE +P
Sbjct: 327 ALNALGRNSEA-IAAFKKALEIDPKFHHAWNGLGAPLNDLGRYSEAIAAFEKALEIDPKF 385
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
H G V ++ A+ +++D + A+ LG AL +G Y +A A+ K
Sbjct: 386 HFAWHGLGNVLNALGRYSEAIAVYEKALEIDPKFHFAWNGLGNALGELGRYSEAIAAYEK 445
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI-DKRFSKAYHLRGLLLHGLGQH 601
A+++D F AW L + L + +A+ + L I +F +A+ RG L LG++
Sbjct: 446 ALEIDPKFHIAWNGLGSARRGLGRNSEAIAAFDKALEITGNQFWQAWANRGSALFYLGRY 505
Query: 602 KKAIKDLSSGL-GIDPSN 618
+AI++ GL PSN
Sbjct: 506 SEAIQNWDEGLQKYQPSN 523
>gi|410218576|gb|JAA06507.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
gi|410264778|gb|JAA20355.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
Length = 807
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A+G++
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 349
Query: 637 EAV 639
E +
Sbjct: 350 EGI 352
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 169 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 226
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 227 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 286
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + A+++ C++L+ N+ GL+ ++G
Sbjct: 287 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 346
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 347 QFYEGIKAQTKVM 359
>gi|395849729|ref|XP_003797468.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Otolemur
garnettii]
Length = 809
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 174 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 232
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 233 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 292
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A+G++
Sbjct: 293 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 352
Query: 637 EAV 639
E +
Sbjct: 353 EGI 355
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 172 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 229
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 230 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 289
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + A+++ C++L+ N+ GL+ ++G
Sbjct: 290 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 349
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 350 QFYEGIKAQTKVM 362
>gi|22761790|dbj|BAC11700.1| unnamed protein product [Homo sapiens]
Length = 806
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A+G++
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 349
Query: 637 EAV 639
E +
Sbjct: 350 EGI 352
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 169 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 226
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 227 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 286
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + A+++ C++L+ N+ GL+ ++G
Sbjct: 287 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 346
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 347 QFYEGIKAQTKVM 359
>gi|428306482|ref|YP_007143307.1| hypothetical protein Cri9333_2958 [Crinalium epipsammum PCC 9333]
gi|428248017|gb|AFZ13797.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 342
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 34/261 (13%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+ +F +G+ +YASAI+ + ++++ P Y EA RG A R AI+ +
Sbjct: 7 VEAEFFFQKGLHLNRIEEYASAIASYGKVVELKPDYAEAWYSRGNALYHLRRYAEAIASY 66
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+A++ P EAW RG A L EAI A++F+P+ + RGI
Sbjct: 67 DQALEYRPGFHEAWNNRGNALDDLKHYEEAIASYDNAIKFKPDYFWAWNNRGI------- 119
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
AL ++G Y +A +++ +AI+ N+ AW +
Sbjct: 120 ---------------------------ALKNLGRYSEAIDSYDRAIEFKPNYYWAWYNRG 152
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ + +KA+ L + L F +A++ RG+ L LG + AI L + P N
Sbjct: 153 MAMRQIDRLDKAIASLDKALLAKPDFHEAWYHRGIALQNLGLCESAIASFDESLTVQPKN 212
Query: 619 IECLYLRASCYHAIGEYREAV 639
I+ Y R ++G Y++A+
Sbjct: 213 IDAWYFRGLALDSLGRYQQAI 233
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 122/251 (48%), Gaps = 15/251 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A + +YA AI+ +DQ L+ P + EA RG A + E AI+ + AI+
Sbjct: 48 SRGNALYHLRRYAEAIASYDQALEYRPGFHEAWNNRGNALDDLKHYEEAIASYDNAIKFK 107
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG EAI +A+EF+PN + RG+ + + A+
Sbjct: 108 PDYFWAWNNRGIALKNLGRYSEAIDSYDRAIEFKPNYYWAWYNRGMAMRQIDRLDKAIAS 167
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LT 558
L + + A+ + G+AL ++G + A + +++ + ++AW L
Sbjct: 168 LDKALLAKPDFHEAWYHRGIALQNLGLCESAIASFDESLTVQPKNIDAWYFRGLALDSLG 227
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++ Q +A+ +K LE +Q Y A + +GL+L LG++++A+ L I P +
Sbjct: 228 RYQQAIASFDKTLE-IQHDKY-------ALNAKGLVLLKLGRYQEALISFDKALHIKPDD 279
Query: 619 IECLYLRASCY 629
LY +A CY
Sbjct: 280 HTALYNKARCY 290
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+Y+ AI +D+ ++ P Y A RG A L+ AI+ +A+ +
Sbjct: 116 NRGIALKNLGRYSEAIDSYDRAIEFKPNYYWAWYNRGMAMRQIDRLDKAIASLDKALLAK 175
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG AI ++L +P + D + RG+ + A+
Sbjct: 176 PDFHEAWYHRGIALQNLGLCESAIASFDESLTVQPKNIDAWYFRGLALDSLGRYQQAIAS 235
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + +K A GL L +G Y++A + KA+ + + A + + Y +
Sbjct: 236 FDKTLEI-QHDKYALNAKGLVLLKLGRYQEALISFDKALHIKPDDHTALYNKARCYALQS 294
Query: 566 NSEKALECLQQVLYI 580
+++ A++ LQQ +++
Sbjct: 295 DADLAIKHLQQAIHL 309
>gi|297281853|ref|XP_001107001.2| PREDICTED: tetratricopeptide repeat protein 13 isoform 4 [Macaca
mulatta]
Length = 807
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A+G++
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 349
Query: 637 EAV 639
E +
Sbjct: 350 EGI 352
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 169 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 226
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 227 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 286
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + A+++ C++L+ N+ GL+ ++G
Sbjct: 287 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 346
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 347 QFYEGIKAQTKVM 359
>gi|73952536|ref|XP_857193.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 3 [Canis
lupus familiaris]
Length = 805
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 170 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 228
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 229 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 288
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A+G++
Sbjct: 289 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 348
Query: 637 EAV 639
E +
Sbjct: 349 EGI 351
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 168 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 225
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 226 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 285
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + A+++ C++L+ N+ GL+ ++G
Sbjct: 286 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 345
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 346 QFYEGIKAQTKVM 358
>gi|435851441|ref|YP_007313027.1| putative endonuclease related to Holliday junction resolvase
[Methanomethylovorans hollandica DSM 15978]
gi|433662071|gb|AGB49497.1| putative endonuclease related to Holliday junction resolvase
[Methanomethylovorans hollandica DSM 15978]
Length = 913
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 126/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+A + G+ AI FD++++ D YP A +G A + E AI + +AI+ +
Sbjct: 647 SKGLALSSLGRDEEAIQAFDKVIEIDSKYPHAWDNKGLALSTLGRDEEAIQAYDKAIEID 706
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W +G A ++LG EAIQ KA+E P SA I +G+ + A++
Sbjct: 707 PKFEGPWSSKGFALSSLGRYEEAIQAYDKAIEINPRSASIWSGKGLALSILGRYEEAIQA 766
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ + SA+ GLALSS+G Y++A +A KAI+++ +W + L
Sbjct: 767 YDKVIEINPRSDSAWDSKGLALSSLGRYEEAIQAFDKAIEVNPKSDISWANTGYVLSSLG 826
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + + ID A+ G L G++++AI+ + I+P + + +
Sbjct: 827 KYEEAMCAFDKAIEIDSMSEIAWVRMGFALTDAGRYEEAIQAFDVVIEINPKSSVIWHTK 886
Query: 626 ASCYHAIGEYREAV 639
++G EA+
Sbjct: 887 GFALRSLGREEEAI 900
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 128/255 (50%), Gaps = 2/255 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
S+G A + G+Y AI +D+ ++ +P A +G A R+ R+ E AI ++ +AI+
Sbjct: 579 SKGFALTDAGRYEEAIQAYDKAIEINPRSDSAWDSKGWALRSLGRD-EEAIQEYDKAIEI 637
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + W +G A ++LG EAIQ K +E + +G+ A++
Sbjct: 638 NPRSASIWNSKGLALSSLGRDEEAIQAFDKVIEIDSKYPHAWDNKGLALSTLGRDEEAIQ 697
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++D + + ++ G ALSS+G Y++A +A+ KAI+++ W L
Sbjct: 698 AYDKAIEIDPKFEGPWSSKGFALSSLGRYEEAIQAYDKAIEINPRSASIWSGKGLALSIL 757
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+A++ +V+ I+ R A+ +GL L LG++++AI+ + ++P +
Sbjct: 758 GRYEEAIQAYDKVIEINPRSDSAWDSKGLALSSLGRYEEAIQAFDKAIEVNPKSDISWAN 817
Query: 625 RASCYHAIGEYREAV 639
++G+Y EA+
Sbjct: 818 TGYVLSSLGKYEEAM 832
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A G+ AI +D+ ++ DP + +G A + E AI + +AI+ N
Sbjct: 681 NKGLALSTLGRDEEAIQAYDKAIEIDPKFEGPWSSKGFALSSLGRYEEAIQAYDKAIEIN 740
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + W +G A + LG EAIQ K +E P S +G+ + A++
Sbjct: 741 PRSASIWSGKGLALSILGRYEEAIQAYDKVIEINPRSDSAWDSKGLALSSLGRYEEAIQA 800
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ ++ ++ G LSS+G+Y++A A KAI++D AW + D
Sbjct: 801 FDKAIEVNPKSDISWANTGYVLSSLGKYEEAMCAFDKAIEIDSMSEIAWVRMGFALTDAG 860
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A++ V+ I+ + S +H +G L LG+ ++AI+
Sbjct: 861 RYEEAIQAFDVVIEINPKSSVIWHTKGFALRSLGREEEAIQ 901
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY A+ FD+ ++ D M A + G A E AI F I+ NP + W
Sbjct: 826 GKYEEAMCAFDKAIEIDSMSEIAWVRMGFALTDAGRYEEAIQAFDVVIEINPKSSVIWHT 885
Query: 455 RGQARAALGESVEAIQDLSKALE 477
+G A +LG EAIQ +A E
Sbjct: 886 KGFALRSLGREEEAIQAFDRAKE 908
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
L + + I E D+ + ++ AS ++ + L+ L +++ + K I I DS ++
Sbjct: 621 LGRDEEAIQEYDKAIEINPRSASIWNSKGLALSSLGRDEEAIQAFDKVIEI-DSKYPHAW 679
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
+ N+ S L + I+ DKA+++DP + KG A S+LGR EEA+ ++
Sbjct: 680 D-----NKGLALSTLGRDEEAIQAYDKAIEIDPKFEGPWSSKGFALSSLGRYEEAIQAYD 734
Query: 128 KGYE 131
K E
Sbjct: 735 KAIE 738
>gi|434404268|ref|YP_007147153.1| tetratricopeptide repeat protein,tetratricopeptide repeat
protein,protein kinase family protein [Cylindrospermum
stagnale PCC 7417]
gi|428258523|gb|AFZ24473.1| tetratricopeptide repeat protein,tetratricopeptide repeat
protein,protein kinase family protein [Cylindrospermum
stagnale PCC 7417]
Length = 704
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 123/244 (50%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A++ +D+ ++ P Y EA GRG + A + AI+ F AIQ E W +
Sbjct: 380 KYPEALAAYDKAIQIQPDYLEAWSGRGFSLANLQRYSEAIASFDRAIQLKNDYPEVWNAK 439
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L + AI+ KA+EF+P + +++G+ K ++ AV + V+L +
Sbjct: 440 GDAFRNLNQYDNAIKSYEKAIEFQPEYYEAWYKKGLALHNLKQYDEAVIAFNKVVELKPD 499
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
SA+ LG AL ++ Y+ A A+ KA+Q ++ AW +L +A+E
Sbjct: 500 YNSAWYSLGNALVNLNRYQDAFIAYDKAVQYKPSYNIAWFSRGNMLINLRRYPEAIESFN 559
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
QV+ + +A++ RG LH + ++++AI+ + L + ++ Y + +++ +Y
Sbjct: 560 QVIKYNPSNYQAWYSRGWSLHQIQRYQEAIESYNKALALKRNDYLVWYALGNSQYSLQKY 619
Query: 636 REAV 639
+A+
Sbjct: 620 EDAI 623
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 117/244 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A++++++ + P Y + G+G A ++ A++ + +AIQ P EAW R
Sbjct: 346 RYQDALAVYEKAVNLKPNYVQGWNGQGKALFELKKYPEALAAYDKAIQIQPDYLEAWSGR 405
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + A L EAI +A++ + + ++ + +G ++ A++ ++ E
Sbjct: 406 GFSLANLQRYSEAIASFDRAIQLKNDYPEVWNAKGDAFRNLNQYDNAIKSYEKAIEFQPE 465
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ GLAL ++ +Y +A A K ++L ++ AW L +L + A
Sbjct: 466 YYEAWYKKGLALHNLKQYDEAVIAFNKVVELKPDYNSAWYSLGNALVNLNRYQDAFIAYD 525
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + ++ A+ RG +L L ++ +AI+ + + +PSN + Y R H I Y
Sbjct: 526 KAVQYKPSYNIAWFSRGNMLINLRRYPEAIESFNQVIKYNPSNYQAWYSRGWSLHQIQRY 585
Query: 636 REAV 639
+EA+
Sbjct: 586 QEAI 589
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A N +Y +AI +++ ++ P Y EA +G A ++ + A+ F + ++
Sbjct: 438 AKGDAFRNLNQYDNAIKSYEKAIEFQPEYYEAWYKKGLALHNLKQYDEAVIAFNKVVELK 497
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW G A L +A KA++++P+ RG + + + A+E
Sbjct: 498 PDYNSAWYSLGNALVNLNRYQDAFIAYDKAVQYKPSYNIAWFSRGNMLINLRRYPEAIES 557
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + N A+ G +L I Y++A E++ KA+ L RN W L L
Sbjct: 558 FNQVIKYNPSNYQAWYSRGWSLHQIQRYQEAIESYNKALALKRNDYLVWYALGNSQYSLQ 617
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
E A+ + + ++++ RG L ++++AI + P+
Sbjct: 618 KYEDAIASYNKAVRYKADHYESWYSRGNAFLNLRRYQEAIASYEQAIKYKPN 669
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G A VN +Y A +D+ ++ P Y A RG R AI F + I+ N
Sbjct: 506 SLGNALVNLNRYQDAFIAYDKAVQYKPSYNIAWFSRGNMLINLRRYPEAIESFNQVIKYN 565
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS +AW RG + + EAI+ +KAL + N + + G + + + A+
Sbjct: 566 PSNYQAWYSRGWSLHQIQRYQEAIESYNKALALKRNDYLVWYALGNSQYSLQKYEDAIAS 625
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ V+ ++ ++ G A ++ Y++A ++ +AI+ N+ +A
Sbjct: 626 YNKAVRYKADHYESWYSRGNAFLNLRRYQEAIASYEQAIKYKPNYQQA 673
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 93/201 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A N +Y A+ F+++++ P Y A G A + A + +A+Q P
Sbjct: 473 KGLALHNLKQYDEAVIAFNKVVELKPDYNSAWYSLGNALVNLNRYQDAFIAYDKAVQYKP 532
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S AW RG L EAI+ ++ +++ P++ + RG + + + A+E
Sbjct: 533 SYNIAWFSRGNMLINLRRYPEAIESFNQVIKYNPSNYQAWYSRGWSLHQIQRYQEAIESY 592
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L + + + LG + S+ +Y+ A ++ KA++ + E+W + +L
Sbjct: 593 NKALALKRNDYLVWYALGNSQYSLQKYEDAIASYNKAVRYKADHYESWYSRGNAFLNLRR 652
Query: 567 SEKALECLQQVLYIDKRFSKA 587
++A+ +Q + + +A
Sbjct: 653 YQEAIASYEQAIKYKPNYQQA 673
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/276 (19%), Positives = 119/276 (43%), Gaps = 1/276 (0%)
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
+K C + S + + + +A + G A A + +K P+ + + +
Sbjct: 248 DKMVCYDFRQRYPSAKLALQALQELAPLTSGTIALAPAALPNNIKTRPLNKKGIFLKFLL 307
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
F + S F +N +A E +K+ G L +A+ KA+ +PN
Sbjct: 308 AMFLVGVSGTASVFIVKEINNNNATELYKQ-GNTFLELQRYQDALAVYEKAVNLKPNYVQ 366
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ +G F+ K + A+ +++ + A++ G +L+++ Y +A + +AI
Sbjct: 367 GWNGQGKALFELKKYPEALAAYDKAIQIQPDYLEAWSGRGFSLANLQRYSEAIASFDRAI 426
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
QL ++ E W +++L + A++ ++ + + +A++ +GL LH L Q+ +A
Sbjct: 427 QLKNDYPEVWNAKGDAFRNLNQYDNAIKSYEKAIEFQPEYYEAWYKKGLALHNLKQYDEA 486
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ + + + P Y + + Y++A I
Sbjct: 487 VIAFNKVVELKPDYNSAWYSLGNALVNLNRYQDAFI 522
>gi|21228450|ref|NP_634372.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
gi|20906930|gb|AAM32044.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
Length = 412
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 114/227 (50%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ +D +LKE+ Y EA G+G A + AI + +A++ +P EAW
Sbjct: 181 GRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYY 240
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G +LG +A++ KA+E +P + D + GI + ++ A+ ++++
Sbjct: 241 KGVDLDSLGSFKQALKAYEKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAIEINS 300
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G LS + + +A EA+ KA+QLD +LEA+ L L E+AL+
Sbjct: 301 ENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIY 360
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
++ L +D + ++ + + L LG+ ++A + IDP E
Sbjct: 361 EKALKLDPEAADSWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEI 407
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 113/244 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ + + L P YP A G+ + E A+ + ++ N + EAW
Sbjct: 147 GEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDAYDIVLKENSNYKEAWAG 206
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A +G EAI KALE +P + + +G+ F A++ V++D
Sbjct: 207 KGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEIDP 266
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN A+ +G+ L ++ Y +A A KAI+++ + W + + ++A+E
Sbjct: 267 ENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAY 326
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ + +D + +AY G +L L + ++A+ L +DP + + +A C +G
Sbjct: 327 RKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAADSWFGKAVCLSYLGR 386
Query: 635 YREA 638
EA
Sbjct: 387 EEEA 390
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 116/245 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI F++ + +DP L + A E A+ + EA++ N + W
Sbjct: 79 GKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVKINSEDADLWNN 138
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ + +GE +A++ KAL+ +P+ + + + + + + AV+ +K +
Sbjct: 139 MAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDAYDIVLKENS 198
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
K A+ G+AL +G Y +A A+ KA+++D FLEAW + L + ++AL+
Sbjct: 199 NYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAY 258
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ + ID A++ G+ L L ++ +AI + I+ N + Y + +
Sbjct: 259 EKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQR 318
Query: 635 YREAV 639
+ EAV
Sbjct: 319 FDEAV 323
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+GIA G Y AI +D+ L+ DP + EA +G + A+ + +A++ +
Sbjct: 206 GKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEID 265
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW G L EAI KA+E ++D+ + +G + + F+ AVE
Sbjct: 266 PENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEA 325
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+LD E AY+ LG L+ + +++A + + KA++LD ++W L
Sbjct: 326 YRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAADSWFGKAVCLSYLG 385
Query: 566 NSEKALECLQQVLYIDKRFSK 586
E+A + ++ + ID R+++
Sbjct: 386 REEEAEDAYRKAVEIDPRYAE 406
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L + +AI + + + E D+ N+ F SQ++ + KA+QLDP L+
Sbjct: 279 LENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLE 338
Query: 105 AYILKGCAFSALGRKEEALSVWEK 128
AY G + L R EEAL ++EK
Sbjct: 339 AYSSLGFVLAQLKRFEEALDIYEK 362
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 76/188 (40%), Gaps = 34/188 (18%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+E G+ + +N A+ + D N AL S+G +++A + + +A++
Sbjct: 68 LNECGLDLLRLGKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVK 127
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVL-----YIDKRFSKAYHL---------- 590
++ + W ++ Y + EKA+E + L Y + + KA +L
Sbjct: 128 INSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAV 187
Query: 591 -------------------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+G+ L +G + +AI L IDP +E Y + +
Sbjct: 188 DAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDS 247
Query: 632 IGEYREAV 639
+G +++A+
Sbjct: 248 LGSFKQAL 255
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D ++G ++ A+ + + ++ DP Y EA G A + E A+ + +A
Sbjct: 304 DVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKA 363
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
++ +P A ++W + + LG EA KA+E +P A+I
Sbjct: 364 LKLDPEAADSWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEI 407
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
+ Q+ + I DKAL++DP L+A+ KG +LG ++AL +EK E
Sbjct: 205 AGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVE 263
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
RL K ++ I ++ + D + + A L SL + +A+++ + + E D
Sbjct: 77 RLGKYNEAIIAFEKAIDKDPGNIYLLNNKA--AALESLGRFEEALKLYQEAVKINSEDAD 134
Query: 72 ICNR-AFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
+ N AF YSQ+ ++ + KAL L P A+ K S GR EEA+ Y
Sbjct: 135 LWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDA----Y 190
Query: 131 EHALHQSADLKQ 142
+ L ++++ K+
Sbjct: 191 DIVLKENSNYKE 202
>gi|145495192|ref|XP_001433589.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400708|emb|CAK66192.1| unnamed protein product [Paramecium tetraurelia]
Length = 652
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 124/259 (47%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++GI + +Y AI +D+I+ +P Y A G+G + E AI + E
Sbjct: 95 FDAWYNKGITLDDLNQYKEAIECYDEIISINPKYIGAWKGKGHTLINLNQYEEAIKCYNE 154
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP AW +G A L + EAI+ ++A+ PN D+ + +G +
Sbjct: 155 AISINPKHNGAWYNKGIALQNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYE 214
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++ + + ++ + A+ G+ L ++ Y++A E + + I ++ ++ AW
Sbjct: 215 EAIKCYNQAISINPKYFDAWYNKGITLDNLNYYEEAIECYDEIISINPKYIYAWNGKGNT 274
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
++L E+A++C + + I+ ++ +G L L Q+++AIK + + I+ +
Sbjct: 275 LRNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYEEAIKCYNEAISINHKYFD 334
Query: 621 CLYLRASCYHAIGEYREAV 639
Y + + +Y+EA+
Sbjct: 335 AWYNKGITLDDLNQYKEAI 353
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 124/259 (47%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++GI N Y AI +D+I+ +P Y A G+G + E AI + E
Sbjct: 231 FDAWYNKGITLDNLNYYEEAIECYDEIISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNE 290
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP+ + W +G L + EAI+ ++A+ D + +GI +
Sbjct: 291 AISINPNQEDVWNCKGNTLRNLNQYEEAIKCYNEAISINHKYFDAWYNKGITLDDLNQYK 350
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+E + ++ + A+ G L ++ +Y++A + + +AI ++ + +AW +
Sbjct: 351 EAIECYDEIISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNQAISINPKYFDAWYNKGAT 410
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+L E+A+EC +++ I+++F A++ +G L L Q+++AIK + + I+ +
Sbjct: 411 LDNLNQYEEAIECYDEIISINQKFIHAWNGKGNTLRKLNQYEEAIKCYNEAISINHKYFD 470
Query: 621 CLYLRASCYHAIGEYREAV 639
+ + +Y EA+
Sbjct: 471 AWNNKGISLQNLNQYEEAI 489
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 122/253 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G +N +Y AI +++ + +P + A +G A + E AI + EAI NP
Sbjct: 135 KGHTLINLNQYEEAIKCYNEAISINPKHNGAWYNKGIALQNLNQYEEAIKCYNEAISINP 194
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + W +G L + EAI+ ++A+ P D + +GI + A+E
Sbjct: 195 NQEDVWNCKGNTLRNLNQYEEAIKCYNQAISINPKYFDAWYNKGITLDNLNYYEEAIECY 254
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ + A+ G L ++ +Y++A + + +AI ++ N + W ++L
Sbjct: 255 DEIISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQ 314
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A++C + + I+ ++ A++ +G+ L L Q+K+AI+ + I+P I +
Sbjct: 315 YEEAIKCYNEAISINHKYFDAWYNKGITLDDLNQYKEAIECYDEIISINPKYIYAWNGKG 374
Query: 627 SCYHAIGEYREAV 639
+ + +Y EA+
Sbjct: 375 NTLRNLNQYEEAI 387
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 119/258 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +G N +Y AI ++Q + +P Y +A +G E AI + E
Sbjct: 198 DVWNCKGNTLRNLNQYEEAIKCYNQAISINPKYFDAWYNKGITLDNLNYYEEAIECYDEI 257
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I NP AW +G L + EAI+ ++A+ PN D+ + +G +
Sbjct: 258 ISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYEE 317
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++ + + ++ + A+ G+ L + +YK+A E + + I ++ ++ AW
Sbjct: 318 AIKCYNEAISINHKYFDAWYNKGITLDDLNQYKEAIECYDEIISINPKYIYAWNGKGNTL 377
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
++L E+A++C Q + I+ ++ A++ +G L L Q+++AI+ + I+ I
Sbjct: 378 RNLNQYEEAIKCYNQAISINPKYFDAWYNKGATLDNLNQYEEAIECYDEIISINQKFIHA 437
Query: 622 LYLRASCYHAIGEYREAV 639
+ + + +Y EA+
Sbjct: 438 WNGKGNTLRKLNQYEEAI 455
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N +Y AI +++ + +P Y +A +G R + E AI + EAI N +AW
Sbjct: 40 NLNQYEEAIKCYNEAVSMNPKYFQAWNNKGNLRNL-NQYEEAIKCYNEAISINHKYFDAW 98
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+G L + EAI+ + + P +G + A++ + + +
Sbjct: 99 YNKGITLDDLNQYKEAIECYDEIISINPKYIGAWKGKGHTLINLNQYEEAIKCYNEAISI 158
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ ++ A+ G+AL ++ +Y++A + + +AI ++ N + W ++L E+A++
Sbjct: 159 NPKHNGAWYNKGIALQNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYEEAIK 218
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
C Q + I+ ++ A++ +G+ L L +++AI+ + I+P I + + +
Sbjct: 219 CYNQAISINPKYFDAWYNKGITLDNLNYYEEAIECYDEIISINPKYIYAWNGKGNTLRNL 278
Query: 633 GEYREAV 639
+Y EA+
Sbjct: 279 NQYEEAI 285
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 116/252 (46%), Gaps = 9/252 (3%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQ--------RELEAAISDFTEAIQSNPS 447
+Y AI +D+ L +P Y +AL +G + + E AI + EA+ NP
Sbjct: 1 QYQVAIECYDEALSINPQYFKALNNKGNLKNLNLGISLENLNQYEEAIKCYNEAVSMNPK 60
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+AW +G R L + EAI+ ++A+ D + +GI + A+E
Sbjct: 61 YFQAWNNKGNLR-NLNQYEEAIKCYNEAISINHKYFDAWYNKGITLDDLNQYKEAIECYD 119
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ ++ + A+ G L ++ +Y++A + + +AI ++ AW + Q+L
Sbjct: 120 EIISINPKYIGAWKGKGHTLINLNQYEEAIKCYNEAISINPKHNGAWYNKGIALQNLNQY 179
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E+A++C + + I+ ++ +G L L Q+++AIK + + I+P + Y +
Sbjct: 180 EEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYEEAIKCYNQAISINPKYFDAWYNKGI 239
Query: 628 CYHAIGEYREAV 639
+ Y EA+
Sbjct: 240 TLDNLNYYEEAI 251
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++GI + +Y AI +D+I+ +P Y A G+G + E AI + +
Sbjct: 333 FDAWYNKGITLDDLNQYKEAIECYDEIISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNQ 392
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP +AW +G L + EAI+ + + + +G K +
Sbjct: 393 AISINPKYFDAWYNKGATLDNLNQYEEAIECYDEIISINQKFIHAWNGKGNTLRKLNQYE 452
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
A++ + + ++ + A+ G++L ++ +Y++A + + +AI +
Sbjct: 453 EAIKCYNEAISINHKYFDAWNNKGISLQNLNQYEEAIKCYNEAISI 498
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D ++G N +Y AI +D+I+ + + A G+G + E AI + E
Sbjct: 401 FDAWYNKGATLDNLNQYEEAIECYDEIISINQKFIHAWNGKGNTLRKLNQYEEAIKCYNE 460
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
AI N +AW +G + L + EAI+ ++A+ +P
Sbjct: 461 AISINHKYFDAWNNKGISLQNLNQYEEAIKCYNEAISIKP 500
>gi|311271182|ref|XP_001926679.2| PREDICTED: tetratricopeptide repeat protein 13 isoform 1 [Sus
scrofa]
Length = 804
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 169 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 227
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 228 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 287
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A+G++
Sbjct: 288 ALLLNQNHVQTLQLRGVMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 347
Query: 637 EAV 639
E +
Sbjct: 348 EGI 350
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 167 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 224
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 225 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 284
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + A+++ C++L+ N+ GL+ ++G
Sbjct: 285 FQKALLLNQNHVQTLQLRGVMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 344
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 345 QFYEGIKAQTKVM 357
>gi|119590336|gb|EAW69930.1| tetratricopeptide repeat domain 13, isoform CRA_b [Homo sapiens]
Length = 639
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 3 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 61
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 62 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 121
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A+G++
Sbjct: 122 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 181
Query: 637 EAV 639
E +
Sbjct: 182 EGI 184
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 1 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 58
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 59 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 118
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + A+++ C++L+ N+ GL+ ++G
Sbjct: 119 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 178
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 179 QFYEGIKAQTKVM 191
>gi|154150715|ref|YP_001404333.1| hypothetical protein Mboo_1172 [Methanoregula boonei 6A8]
gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
Length = 4079
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 4/241 (1%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA--WKRRGQ 457
A++ +DQ L +P Y EA+ +G + + AI F A++ NPS +A WK R
Sbjct: 3765 ALAAYDQALSANPGYAEAIFQKGRTYITLQNPDGAIRSFDRALEVNPSCFQAHYWKARTL 3824
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
G AI + +A+ +P+ ++ +RG+ + A++ ++LD
Sbjct: 3825 YDE--GSYDAAITEYDRAIAIKPDRPELYRDRGLAYAAIDQYREAIKSYDKALELDTHGA 3882
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
A+++ G +L+ +G Y+ A EA KAI+ D +W DL +A +
Sbjct: 3883 DAFSHKGSSLAELGMYRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACAAYDEG 3942
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
L D + + RG+ L GL HK AI+ L IDPS + R S + A+G++ E
Sbjct: 3943 LRRDPENAVGWTRRGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALGQFEE 4002
Query: 638 A 638
A
Sbjct: 4003 A 4003
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 1/267 (0%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ ++ +V F L +G + + A+ +F+ +L+ DP EA G A A +
Sbjct: 1121 IALNQRSTVAF-LYKGFSLEKINRAGEALQVFEVLLEIDPHNSEAHYHMGLALAGSGRPK 1179
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A++ F A++ + AW +G+ LG+ EA+ +ALE EP ++ + RG+
Sbjct: 1180 DALAAFESALKIRDTFAPAWYNKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSRGVA 1239
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
K F A+E ++ D N Y + G+ALS +G Y++A +A +A+ D
Sbjct: 1240 LSKLGRFPEAIEAFERNLEKDTSNAPGYYFKGIALSKLGRYQEALDAFDRALVYDPENAL 1299
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ + L ++A+ ++ L + R+S+A +G+ L+ LG++ AI+D +
Sbjct: 1300 VYFQKGRALDGLNRFQEAVAAFEKTLALKPRYSEARMRKGISLYNLGRYADAIRDFDRTI 1359
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAV 639
+P N Y + G Y EA+
Sbjct: 1360 AENPHNFHAWYQKGRALFDSGSYTEAI 1386
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 34/289 (11%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GIA V GK+ AI+ ++ L++ P A +G + A + E A+ F ++
Sbjct: 690 IHKGIALVTTGKFEEAIAALNRALEDAPRDERAWYYKGMSLAALQRFEEAVRSFERVLEI 749
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N A+ ++G A A LG+ +EAI +ALE +P++ L+++GI + + ++ A++
Sbjct: 750 NRRCSPAFFQKGNALAHLGKQLEAIISYDQALEIDPDNPVTLYQKGIALAQRERYDDAIK 809
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD----------------- 547
+ L+ EN A YLG+A + + +A A +++++D
Sbjct: 810 TFERLLTLEPENAQALYYLGIAYAGRQRFDEAIVAFERSLEIDPKNPLAHHYMGVSLVEC 869
Query: 548 -------RNF-----LEAWGHLTQFYQDLA-----NSEKALECLQQVLYIDKRFSKAYHL 590
R+F L+A T +YQ +A E+A+ L + +D S A+
Sbjct: 870 DRYDDALRSFSEALLLDASNASTYYYQGIAFLQSHQYEEAIAALNTAIRMDTSLSDAFTY 929
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G+ L LG+H +A+ L+ L +PS +E L R + Y +AV
Sbjct: 930 LGISLARLGRHDEAVAALNRSLAANPSQMEALVCRGESLMVLQRYADAV 978
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R+ +GI+ N G+YA AI FD+ + E+P A +G A AI + A++
Sbjct: 1335 RMRKGISLYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAYDRALE 1394
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
S EA +G A LG EA+ +ALE P+ L RG K + + AV
Sbjct: 1395 VESSYPEAHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHRGAALMKLERYREAV 1454
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ A + L + A+ G++L++ G Y+ + A+ +A++ D E+ + +
Sbjct: 1455 QAFDAALLLLPKYAPAHHLKGVSLAAQGLYQDSIYAYDRALECDPGSGESALNKAMSLHN 1514
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L E AL + + I F++A+ RGL+L LG+++++++ L L DP N Y
Sbjct: 1515 LGQDEDALAAAVKAIEIQPDFAEAWRYRGLILSNLGRYQESVEALDHALAGDPKNARVNY 1574
Query: 624 LRASCYHAIGEYREAV 639
+ + +G+Y A+
Sbjct: 1575 QKGRAFDGLGQYENAI 1590
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 8/305 (2%)
Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNE 394
D SD+ ++ K M +E K F T + + V F +G+A
Sbjct: 3266 DPVFSDALFAKGKALLTLGMFREAV------KTFDKTLLIEKNYAGVYFH--KGLALAEL 3317
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ AI+ FD+ + D +A +G + A +L A+ F IQ++P + + W
Sbjct: 3318 GRHDEAITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLH 3377
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG +AI KALE P +AD + G + ++ A+ + L
Sbjct: 3378 RGMALFDLGRFNDAISSYKKALEIGPTNADAWYLVGRSYYALNTYDEAIAAFDRALDLQG 3437
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E A+ Y G L ++G+Y +A A+ + L EA+ H L + A+
Sbjct: 3438 EFAEAWYYKGRTLFAMGKYGEAVSAYDSTLVLRPKHDEAFYHKGMALLKLQRAGDAVSAF 3497
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q L + FS + +G+ L L +HK AI + + +D + Y Y ++G
Sbjct: 3498 DQALRLRPNFSYIWTGKGMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGR 3557
Query: 635 YREAV 639
Y++A+
Sbjct: 3558 YQDAI 3562
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G++ GK +A+ FD +++ DP + + RG A AIS + +A++ P
Sbjct: 3344 KGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLHRGMALFDLGRFNDAISSYKKALEIGP 3403
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +AW G++ AL EAI +AL+ + A+ + +G F + AV
Sbjct: 3404 TNADAWYLVGRSYYALNTYDEAIAAFDRALDLQGEFAEAWYYKGRTLFAMGKYGEAVSAY 3463
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L ++ A+ + G+AL + A A +A++L NF W L
Sbjct: 3464 DSTLVLRPKHDEAFYHKGMALLKLQRAGDAVSAFDQALRLRPNFSYIWTGKGMALAALDR 3523
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ A+ C + + +D++ S+AY+ GL LG+++ AI++ + L PS Y +
Sbjct: 3524 HKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGRYQDAIRNFEATLVQHPSCARAFYAKG 3583
Query: 627 SCYHAIGEYREAV 639
+ + EA+
Sbjct: 3584 RALCGVSMFHEAI 3596
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A + G+Y+ A++ +D+ LK P YP+A+ +G A A E A+ +F A+ NP
Sbjct: 421 GLASASLGRYSDAVAAYDRALKIRPDYPDAVYHKGFALAKLGNSEDALLEFDRALTENPG 480
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ ++GQ G EA++ L+K++ +P++A + +++G K + F A+E
Sbjct: 481 NAPAYHQKGQLLVRTGRLEEALEALNKSIALKPDNAQVYYDKGSALLKAERFGPALEAFD 540
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ + +AY G+A S G K+A EA AI +D A H L
Sbjct: 541 QAIGIYPNYVNAYYNKGIAFSRTGMRKEALEAFDHAIAIDPTHTLALYHRGTMLSGLGRY 600
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
A VL + + + A + +G+ L L + K A + + DP I+ +
Sbjct: 601 ADAAAAYDAVLALSPQNTSALYEKGVALMQLSRWKDAAEAFGQAVEQDPGLIDAWLAFGT 660
Query: 628 CYHAIGEYREAV 639
C +G++ +A+
Sbjct: 661 CNANLGKFPDAI 672
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 34/270 (12%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEAL---------IGR----------------- 421
G+A +Y+ A+S FD++L+ P EAL +GR
Sbjct: 2461 GLAYAALSRYSPALSAFDKLLESGPQNAEALFQKGRMLAKLGRPDEALAVLETSLGLENN 2520
Query: 422 --------GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
G+ Q LE A+ F A+ P AW R+G+A + L EAIQ
Sbjct: 2521 IADVWLLKGSVLLEQERLEDALEVFDRALALTPENNAAWYRKGKAFSGLHRYPEAIQCFD 2580
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+ + + A +G D AA+E L+ ++L +N + + +AL+ +G Y
Sbjct: 2581 RVVTSDTGCAQAWFRKGSALLSNGDLRAAIEALTKALELKPDNANGWYDRAVALAGLGRY 2640
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+++ ++ +A+ L+ + A+ L +A+E + ID F+ AY +GL
Sbjct: 2641 EESIPSYDRALSLNPKYTSAYFDKGSALSRLGRDRQAIEAFEMASAIDPEFAVAYLEKGL 2700
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L L ++K+A+ + L +DP+N+ L+
Sbjct: 2701 ALARLSKNKEAVAAFDATLALDPANVPALF 2730
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 108/243 (44%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ FD +L P + +AL + A + A++ ++ A+ PS + RG
Sbjct: 3184 YDEAIAAFDHVLNLVPEHFDALFQKARALDDLGKYSEAVTSYSAALALKPSDAKTHYYRG 3243
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ A G+ EA++ ALE +P +D L +G F AV+ + ++K
Sbjct: 3244 VSLAENGQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAVKTFDKTLLIEKNY 3303
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
Y + GLAL+ +G + +A A K I LD +A+ H A+E
Sbjct: 3304 AGVYFHKGLALAELGRHDEAITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAFDH 3363
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
V+ D + + RG+ L LG+ AI L I P+N + YL Y+A+ Y
Sbjct: 3364 VIQADPGSVQGWLHRGMALFDLGRFNDAISSYKKALEIGPTNADAWYLVGRSYYALNTYD 3423
Query: 637 EAV 639
EA+
Sbjct: 3424 EAI 3426
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 123/271 (45%), Gaps = 7/271 (2%)
Query: 375 KSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR-- 429
K+ I DF + RG+ N G+Y ++ D L DP A + RAF
Sbjct: 1527 KAIEIQPDFAEAWRYRGLILSNLGRYQESVEALDHALAGDPK--NARVNYQKGRAFDGLG 1584
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E AIS + A+Q+ P A +G+A + +A ++ K L P++A+ +
Sbjct: 1585 QYENAISAYDAALQAQPDCIPARMHKGEALLFISRFRDATKEFGKILTEHPDNAEAWIKM 1644
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
F D+ +E ++ + ++ A Y GLA +G Y++A E+ +A Q+D +
Sbjct: 1645 ARARFSLGDYTEVIEACDHALRFNADSAEALLYRGLAQYELGRYEEAVESLARAEQIDSH 1704
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+A HL L A+ +VL + + A+HLRG+ L G + +AI
Sbjct: 1705 LEQAVYHLGAALLKLERYGDAIPAFDRVLSLKPDQATAHHLRGVALAAQGMYPEAISSFE 1764
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ L DP + E +A H++G E+++
Sbjct: 1765 NALRYDPRSAESALNKAIALHSLGRDEESIL 1795
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 121/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A + AI+ FD+ L E YPEA + RG A A E E A+ + A+ N
Sbjct: 3581 AKGRALCGVSMFHEAITSFDKALSEQSDYPEAWLYRGIAEANLEEFEEALDCYNHALAQN 3640
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S A +G+A L + EA+ + K L +P SAD + +G + + + A++
Sbjct: 3641 ESYATALLNKGRALIHLERTGEALAAIEKVLTIQPESADAFYYKGRAHLNRRQDDDAIDA 3700
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++++ A+ Y G AL+ G+Y++A A A+++ ++ EA+ + L
Sbjct: 3701 FNRALAINRQFAEAHYYKGTALARKGQYEEAVAAFDAALRIKSDYPEAFYEKGRALFHLE 3760
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
S++AL Q L + +++A +G L AI+ L ++PS + Y +
Sbjct: 3761 RSKEALAAYDQALSANPGYAEAIFQKGRTYITLQNPDGAIRSFDRALEVNPSCFQAHYWK 3820
Query: 626 ASCYHAIGEYREAV 639
A + G Y A+
Sbjct: 3821 ARTLYDEGSYDAAI 3834
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G ++ GKY A++ FDQ L+ +P Y E RG A + AI F ++ +
Sbjct: 1201 NKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSRGVALSKLGRFPEAIEAFERNLEKD 1260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S + +G A + LG EA+ +AL ++P +A + ++G F AV
Sbjct: 1261 TSNAPGYYFKGIALSKLGRYQEALDAFDRALVYDPENALVYFQKGRALDGLNRFQEAVAA 1320
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L A G++L ++G Y A + I + + AW + D
Sbjct: 1321 FEKTLALKPRYSEARMRKGISLYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSG 1380
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ +A++ + L ++ + +A++ +GL L+ LG++++A+ L +P L+ R
Sbjct: 1381 SYTEAIDAYDRALEVESSYPEAHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHR 1440
Query: 626 ASCYHAIGEYREAV 639
+ + YREAV
Sbjct: 1441 GAALMKLERYREAV 1454
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 117/244 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+YA A+ FD+IL +P A + +G A + + A++ +T ++ NP +AW R+
Sbjct: 973 RYADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVYTRVLEINPGNADAWARK 1032
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G LG + EA+ SKAL+ I +G + A E + +KLD +
Sbjct: 1033 GVLLQDLGRTAEAVTAFSKALDINAGIGGIWMHKGDALSTLGKTSEAAEAYAEALKLDPD 1092
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ + G AL +G Y+ A +A AI L++ A+ + + + + +AL+ +
Sbjct: 1093 QEEGWIKGGRALFDLGRYQDAIDAFDNAIALNQRSTVAFLYKGFSLEKINRAGEALQVFE 1152
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+L ID S+A++ GL L G G+ K A+ S L I + Y + +G+Y
Sbjct: 1153 VLLEIDPHNSEAHYHMGLALAGSGRPKDALAAFESALKIRDTFAPAWYNKGKMLLDLGKY 1212
Query: 636 REAV 639
+EA+
Sbjct: 1213 QEAL 1216
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 108/245 (44%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY+ A++ + L P + RG + A + E A+ F A++ +P +A
Sbjct: 3216 GKYSEAVTSYSAALALKPSDAKTHYYRGVSLAENGQPEEAVKAFDAALEIDPVFSDALFA 3275
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G+A LG EA++ K L E N A + +G+ + + A+ + LD
Sbjct: 3276 KGKALLTLGMFREAVKTFDKTLLIEKNYAGVYFHKGLALAELGRHDEAITAFDKDIDLDA 3335
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N A+ + G++L++ G+ A EA IQ D ++ W H DL A+
Sbjct: 3336 GNNDAFYHKGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLHRGMALFDLGRFNDAISSY 3395
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ L I + A++L G + L + +AI L + E Y + A+G+
Sbjct: 3396 KKALEIGPTNADAWYLVGRSYYALNTYDEAIAAFDRALDLQGEFAEAWYYKGRTLFAMGK 3455
Query: 635 YREAV 639
Y EAV
Sbjct: 3456 YGEAV 3460
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 1/245 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI+ G++ AIS +D L DP Y + +G A A + AI+ + +A+ P
Sbjct: 114 KGISLYELGRFRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKAVGIVP 173
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ G + +G EA+ KA + +P+ + + R + K + + A E
Sbjct: 174 EYAKAYYNMGISLYEIGRYDEALGAFEKAHDLDPSDPWVWYYRAFILAKQERYAQAAEAA 233
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + E+ + G++L + +A +A +AI+ D +AW + D+
Sbjct: 234 GVFLSFEPEHADIWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKGFSLFDMER 293
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A L + + + +K Y+ RG LG++++A+ D L +P N + LY R
Sbjct: 294 YEDATYALDKAAELSPQTTKIYYTRGKANQRLGKYREAVADFDRALAAEPENADALYSRG 353
Query: 627 -SCYH 630
SC H
Sbjct: 354 VSCIH 358
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 140/629 (22%), Positives = 257/629 (40%), Gaps = 78/629 (12%)
Query: 14 NKTHKTICEIDELVRVDSVMASAI-TARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
++ K I + +R+D A+ A I LA+L + +AI + D L E I
Sbjct: 1958 HRDEKAIAAFAKTLRIDPENPDALFQAGIVLARL---EKYDEAIGLFDRYLELGKENAGI 2014
Query: 73 C-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
R Y L+ + I D+AL LD + A + KG + + LG+ EEA++++++
Sbjct: 2015 LYERGCAYFALQKYSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFDR--- 2071
Query: 132 HALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSEN 191
++T ++ V + + +++ L E + A D+ E N
Sbjct: 2072 -----------------VITLDPEN--VIAHFVMGTALARLARYEDAVVALDRALEYDGN 2112
Query: 192 HNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVS 251
+ + C S R S S AK P L GK S
Sbjct: 2113 NARIYACKGYSLYRLGRFKESAESF-----------AKAQKREPKDPFSLRFRGK----S 2157
Query: 252 ENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTH-DVHDK 310
HNG + + FD G I+ S + + + +H +HD+
Sbjct: 2158 LLHNGKWEEGIAI----------------FDKLLG-IEPKSADAWYYKGIAYSHLSLHDE 2200
Query: 311 L--SSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKK- 367
S + A D + Y K + + ES ++ + A RN
Sbjct: 2201 AQESFEQALTIDGECATAWYQKGLVLFERER-FEESLPAFERAAELAPSVQDYAFRNALC 2259
Query: 368 -FCVTRISKSKSISVDFRLSRG----IAQVNEGK-------YASAISIFDQILKEDPMYP 415
F + R ++ S + D L+ G + Q G+ Y A+ ++ + DP
Sbjct: 2260 LFMLERYPEAIS-AFDRALTLGPETAVIQYYRGRALAEMRDYGVALDALNRAIGLDPENS 2318
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+ +G+ Q++ AA++ F +A+ +P A +A +G+A + LG EAI A
Sbjct: 2319 FTWLAKGSVLLAQKDGAAAVAAFDQALVLDPKAADAAFFKGEAFSLLGNDEEAIHAYDLA 2378
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L E + ++G+ + K++N A+E A ++ + A+ + GLAL ++G+ +K
Sbjct: 2379 LSLESAYPEGSFKKGLALLRLKNYNGAIEAFDAAIQFVPGHAQAHYHKGLALFALGKNEK 2438
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + A++ D + +A H Y L+ AL ++L + ++A +G +L
Sbjct: 2439 AIRSFTHALEHDPSLSDALFHTGLAYAALSRYSPALSAFDKLLESGPQNAEALFQKGRML 2498
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
LG+ +A+ L + LG++ +NI ++L
Sbjct: 2499 AKLGRPDEALAVLETSLGLE-NNIADVWL 2526
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 109/237 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ G+ A+ FD L+ DP++ +AL +G A A+ F + +
Sbjct: 3242 RGVSLAENGQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAVKTFDKTLLIEK 3301
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + +G A A LG EAI K ++ + + D + +G+ A+E
Sbjct: 3302 NYAGVYFHKGLALAELGRHDEAITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAF 3361
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ D + + + G+AL +G + A ++ KA+++ +AW + + Y L
Sbjct: 3362 DHVIQADPGSVQGWLHRGMALFDLGRFNDAISSYKKALEIGPTNADAWYLVGRSYYALNT 3421
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
++A+ + L + F++A++ +G L +G++ +A+ S L + P + E Y
Sbjct: 3422 YDEAIAAFDRALDLQGEFAEAWYYKGRTLFAMGKYGEAVSAYDSTLVLRPKHDEAFY 3478
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 124/578 (21%), Positives = 226/578 (39%), Gaps = 58/578 (10%)
Query: 85 HKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE------HAL-HQS 137
+ I D+AL+++ + +A+ KG A LGR EEAL +++ E +AL H+
Sbjct: 1382 YTEAIDAYDRALEVESSYPEAHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHRG 1441
Query: 138 ADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDI 197
A L + E + A + +Y ++ + ++++ GL ++ ++++
Sbjct: 1442 AALMKLERYREAVQAFDAALLLLPKYAPAHHLKGVSLAAQGL-----YQDSIYAYDRALE 1496
Query: 198 CDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGS 257
CD S +++ S L N DE ++ + + I E
Sbjct: 1497 CDPGSGESALNKAMS-------LHNLGQDE----DALAAAVKAIEIQPDFAEAWRYR--- 1542
Query: 258 SDGSKSTHASRDASEINRQSSDDFD-ICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSA 316
G ++ R ++S + D G A VN + GR +G + +S+ A
Sbjct: 1543 --GLILSNLGR-----YQESVEALDHALAGDPKNARVNYQKGRAFDGLGQYENAISAYDA 1595
Query: 317 SLN---DSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRI 373
+L D ++ + ++ D+T+ K+ L E + A+ K R
Sbjct: 1596 ALQAQPDCIPARMHKGEALLFISRFRDATKEFGKI------LTEHPDNAEAWIKMARARF 1649
Query: 374 S---------------KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
S + + S + L RG+AQ G+Y A+ + + D +A+
Sbjct: 1650 SLGDYTEVIEACDHALRFNADSAEALLYRGLAQYELGRYEEAVESLARAEQIDSHLEQAV 1709
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
G A AI F + P A RG A AA G EAI AL +
Sbjct: 1710 YHLGAALLKLERYGDAIPAFDRVLSLKPDQATAHHLRGVALAAQGMYPEAISSFENALRY 1769
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+P SA+ + I ++ + + + A+ Y G+AL ++ Y A
Sbjct: 1770 DPRSAESALNKAIALHSLGRDEESILASDIALGIQPDFAEAWYYKGVALETLKRYADAVP 1829
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
A ++++LD AW + +L E+A VL + + AY +G L L
Sbjct: 1830 AFSRSLELDSTTTHAWFEMGLCLVELQRYEEAAGAFDHVLGLVSDYPPAYFHKGRALALL 1889
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
G++++A+ S L I P + L + ++ +YR
Sbjct: 1890 GKYEEAVVAFDSALAITPGDAIVLSAKGHALESLKKYR 1927
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 119/248 (47%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
+EG Y +AI+ +D+ + P PE RG A A + AI + +A++ + +A+
Sbjct: 3826 DEGSYDAAITEYDRAIAIKPDRPELYRDRGLAYAAIDQYREAIKSYDKALELDTHGADAF 3885
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+G + A LG +A++ KA+E +P A +G V + F A ++
Sbjct: 3886 SHKGSSLAELGMYRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACAAYDEGLRR 3945
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
D EN +T G++L+ + ++K A E++ +A+ +D +F A+ ++ L E+A
Sbjct: 3946 DPENAVGWTRRGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALGQFEEAEA 4005
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+ ++ + F A+ +G L ++++A+ L IDPS E S +
Sbjct: 4006 SFRAMISLQPDFVDAWIHQGRALQEQEKYQEALTSFKRALEIDPSRKEIWNDVGSTLDKL 4065
Query: 633 GEYREAVI 640
G++ EA I
Sbjct: 4066 GKHEEAQI 4073
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 34/274 (12%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A++++ ++L+ +P +A +G A++ F++A+ N G W +G A
Sbjct: 1011 ALAVYTRVLEINPGNADAWARKGVLLQDLGRTAEAVTAFSKALDINAGIGGIWMHKGDAL 1070
Query: 460 AALGESVEAIQDLSKALEFEP--------------------------NSADILHERGIVN 493
+ LG++ EA + ++AL+ +P ++A L++R V
Sbjct: 1071 STLGKTSEAAEAYAEALKLDPDQEEGWIKGGRALFDLGRYQDAIDAFDNAIALNQRSTVA 1130
Query: 494 FKFKDFNA--------AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
F +K F+ A++ +++D N A+ ++GLAL+ G K A A A++
Sbjct: 1131 FLYKGFSLEKINRAGEALQVFEVLLEIDPHNSEAHYHMGLALAGSGRPKDALAAFESALK 1190
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ F AW + + DL ++AL Q L + +++ ++ RG+ L LG+ +AI
Sbjct: 1191 IRDTFAPAWYNKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSRGVALSKLGRFPEAI 1250
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ L D SN Y + +G Y+EA+
Sbjct: 1251 EAFERNLEKDTSNAPGYYFKGIALSKLGRYQEAL 1284
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G+A K A++ FD L DP AL +G A A ++ AI+ F A++
Sbjct: 2696 LEKGLALARLSKNKEAVAAFDATLALDPANVPALFNKGLALANLKKFADAITVFDAALRI 2755
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ EAW +G A++ L +A+ AL +P + +E+G+ + + AV
Sbjct: 2756 DAKHYEAWFAKGYAQSRLRHYDDAVGAFDHALAIDPGRYAVWYEKGVALARAGKNDEAVA 2815
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
S + D + A G AL +GE ++A + +A+ LD +F +A +L + +
Sbjct: 2816 AFSEAIARDDKKPEAQYEKGRALLELGEDEQAVTSFTRALDLDTSFGDAAYYLGLALERV 2875
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
A+ +++ S A++ RG+ LG+ A++ I+P N+ L+
Sbjct: 2876 GKFTDAITAYDRMVAARPDHSDAWYHRGIASERLGRDNDAVQAYEKARQIEPHNLPLLFA 2935
Query: 625 RASCYHAIGEYREAV 639
+ +G++ +A+
Sbjct: 2936 DGRAWARLGQFEDAI 2950
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 126/282 (44%), Gaps = 34/282 (12%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D + +GI+ + A FD+ +++DP+ P+A + +G + E A +
Sbjct: 244 ADIWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKGFSLFDMERYEDATYALDK 303
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A + +P + + RG+A LG+ EA+ D +AL EP +AD L+ RG+ ++
Sbjct: 304 AAELSPQTTKIYYTRGKANQRLGKYREAVADFDRALAAEPENADALYSRGVSCIHLSRYD 363
Query: 501 AAV-------------------------------EDLSA---CVKLDKENKSAYTYLGLA 526
++ E +SA + +D SA +GLA
Sbjct: 364 ESLSVFDRILASQGDHAGASYFRGVVLSRLGRQDEAISAFEHTLAIDPGCASAAYQIGLA 423
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+S+G Y A A+ +A+++ ++ +A H L NSE AL + L + +
Sbjct: 424 SASLGRYSDAVAAYDRALKIRPDYPDAVYHKGFALAKLGNSEDALLEFDRALTENPGNAP 483
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
AYH +G LL G+ ++A++ L+ + + P N + Y + S
Sbjct: 484 AYHQKGQLLVRTGRLEEALEALNKSIALKPDNAQVYYDKGSA 525
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 117/253 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA G+Y A+ FD+ L DP +G A + A++ F + + P
Sbjct: 1270 KGIALSKLGRYQEALDAFDRALVYDPENALVYFQKGRALDGLNRFQEAVAAFEKTLALKP 1329
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA R+G + LG +AI+D + + P++ +++G F + A++
Sbjct: 1330 RYSEARMRKGISLYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAY 1389
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++++ A+ + GLAL +G Y++A ++ +A++ + + A H L
Sbjct: 1390 DRALEVESSYPEAHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHRGAALMKLER 1449
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A++ L + +++ A+HL+G+ L G ++ +I L DP + E +A
Sbjct: 1450 YREAVQAFDAALLLLPKYAPAHHLKGVSLAAQGLYQDSIYAYDRALECDPGSGESALNKA 1509
Query: 627 SCYHAIGEYREAV 639
H +G+ +A+
Sbjct: 1510 MSLHNLGQDEDAL 1522
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 34/289 (11%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A + A++ FDQ+L +P P A RG A + + E A+ + S
Sbjct: 3070 LERGRALAALNRNDEAVASFDQVLALEPADPVASFERGRALYYAAKYEHAVEALDTTLSS 3129
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-------------- 490
+P A R + AAL EA + + L + P +AD +E+G
Sbjct: 3130 DPRHPGALYFRAASLAALERYAEAAESFERLLVYTPENADAWYEQGCVLARLRHYDEAIA 3189
Query: 491 ----IVNFKFKDFNA----------------AVEDLSACVKLDKENKSAYTYLGLALSSI 530
++N + F+A AV SA + L + + Y G++L+
Sbjct: 3190 AFDHVLNLVPEHFDALFQKARALDDLGKYSEAVTSYSAALALKPSDAKTHYYRGVSLAEN 3249
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+ ++A +A A+++D F +A + L +A++ + L I+K ++ Y
Sbjct: 3250 GQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAVKTFDKTLLIEKNYAGVYFH 3309
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+GL L LG+H +AI + +D N + Y + A G+ A+
Sbjct: 3310 KGLALAELGRHDEAITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAM 3358
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 5/240 (2%)
Query: 369 CVTRISKSKSISVD----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
+T ++ +I D +R RG+A +Y AI +D+ L+ D +A +G++
Sbjct: 3833 AITEYDRAIAIKPDRPELYR-DRGLAYAAIDQYREAIKSYDKALELDTHGADAFSHKGSS 3891
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
A A+ F +AI+ +P +W +G LG+ EA + L +P +A
Sbjct: 3892 LAELGMYRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACAAYDEGLRRDPENAV 3951
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG+ D AA+E + +D AY G A ++G++++AE + I
Sbjct: 3952 GWTRRGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALGQFEEAEASFRAMI 4011
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
L +F++AW H + Q+ ++AL ++ L ID + ++ G L LG+H++A
Sbjct: 4012 SLQPDFVDAWIHQGRALQEQEKYQEALTSFKRALEIDPSRKEIWNDVGSTLDKLGKHEEA 4071
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 112/287 (39%), Gaps = 34/287 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ + +Y A FD L P PE +G A E A++ F AI P
Sbjct: 3004 RGLSLLALERYEDADMAFDAALSLSPDLPEIWEKKGGALMHAGNYEGAVAAFDHAISLLP 3063
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG+A AAL + EA+ + L EP ERG + + AVE L
Sbjct: 3064 DDPGAYLERGRALAALNRNDEAVASFDQVLALEPADPVASFERGRALYYAAKYEHAVEAL 3123
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG----------- 555
+ D + A + +L+++ Y +A E+ + + +AW
Sbjct: 3124 DTTLSSDPRHPGALYFRAASLAALERYAEAAESFERLLVYTPENADAWYEQGCVLARLRH 3183
Query: 556 -----------------HLTQFYQ------DLANSEKALECLQQVLYIDKRFSKAYHLRG 592
H +Q DL +A+ L + +K ++ RG
Sbjct: 3184 YDEAIAAFDHVLNLVPEHFDALFQKARALDDLGKYSEAVTSYSAALALKPSDAKTHYYRG 3243
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ L GQ ++A+K + L IDP + L+ + +G +REAV
Sbjct: 3244 VSLAENGQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAV 3290
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 119/253 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A KY+ AI+ FD+ L D + AL+ +G +RA + E A++ F I +P
Sbjct: 2018 RGCAYFALQKYSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFDRVITLDP 2077
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A G A A L +A+ L +ALE++ N+A I +G ++ F + E
Sbjct: 2078 ENVIAHFVMGTALARLARYEDAVVALDRALEYDGNNARIYACKGYSLYRLGRFKESAESF 2137
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ K + ++ + + G +L G++++ K + ++ +AW + Y L+
Sbjct: 2138 AKAQKREPKDPFSLRFRGKSLLHNGKWEEGIAIFDKLLGIEPKSADAWYYKGIAYSHLSL 2197
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++A E +Q L ID + A++ +GL+L + ++++ + PS + + A
Sbjct: 2198 HDEAQESFEQALTIDGECATAWYQKGLVLFERERFEESLPAFERAAELAPSVQDYAFRNA 2257
Query: 627 SCYHAIGEYREAV 639
C + Y EA+
Sbjct: 2258 LCLFMLERYPEAI 2270
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G+A + Y AI FD ++ P + +A +G A + E AI FT A++
Sbjct: 2390 FKKGLALLRLKNYNGAIEAFDAAIQFVPGHAQAHYHKGLALFALGKNEKAIRSFTHALEH 2449
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+PS +A G A AAL A+ K LE P +A+ L ++G + K + A+
Sbjct: 2450 DPSLSDALFHTGLAYAALSRYSPALSAFDKLLESGPQNAEALFQKGRMLAKLGRPDEALA 2509
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
L + L+ + G L + A E +A+ L AW + + L
Sbjct: 2510 VLETSLGLENNIADVWLLKGSVLLEQERLEDALEVFDRALALTPENNAAWYRKGKAFSGL 2569
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+A++C +V+ D ++A+ +G L G + AI+ L+ L + P N Y
Sbjct: 2570 HRYPEAIQCFDRVVTSDTGCAQAWFRKGSALLSNGDLRAAIEALTKALELKPDNANGWYD 2629
Query: 625 RASCYHAIGEYREAV 639
RA +G Y E++
Sbjct: 2630 RAVALAGLGRYEESI 2644
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V+ ++GIA G A+ FD + DP + AL RGT + A + +
Sbjct: 550 VNAYYNKGIAFSRTGMRKEALEAFDHAIAIDPTHTLALYHRGTMLSGLGRYADAAAAYDA 609
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
+ +P A +G A L +A + +A+E +P D G N F
Sbjct: 610 VLALSPQNTSALYEKGVALMQLSRWKDAAEAFGQAVEQDPGLIDAWLAFGTCNANLGKFP 669
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ + L +N A+ + G+AL + G++++A A +A++ AW +
Sbjct: 670 DAIAAFDRVIALSPKNTQAFIHKGIALVTTGKFEEAIAALNRALEDAPRDERAWYYKGMS 729
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
L E+A+ ++VL I++R S A+ +G L LG+ +AI L IDP N
Sbjct: 730 LAALQRFEEAVRSFERVLEINRRCSPAFFQKGNALAHLGKQLEAIISYDQALEIDPDNPV 789
Query: 621 CLY 623
LY
Sbjct: 790 TLY 792
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 114/254 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A G++ AI F++ L++D +G A + + A+ F A+ +
Sbjct: 1235 SRGVALSKLGRFPEAIEAFERNLEKDTSNAPGYYFKGIALSKLGRYQEALDAFDRALVYD 1294
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + ++G+A L EA+ K L +P ++ +GI + + A+ D
Sbjct: 1295 PENALVYFQKGRALDGLNRFQEAVAAFEKTLALKPRYSEARMRKGISLYNLGRYADAIRD 1354
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + N A+ G AL G Y +A +A+ +A++++ ++ EA H +L
Sbjct: 1355 FDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAYDRALEVESSYPEAHYHKGLALYELG 1414
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+AL Q L + A RG L L ++++A++ + L + P +L+
Sbjct: 1415 RYEEALLSYDQALESNPHLDYALFHRGAALMKLERYREAVQAFDAALLLLPKYAPAHHLK 1474
Query: 626 ASCYHAIGEYREAV 639
A G Y++++
Sbjct: 1475 GVSLAAQGLYQDSI 1488
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 118/289 (40%), Gaps = 38/289 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAI-SDFTEAIQS 444
RG+A +G Y AIS F+ L+ DP E+ + + A + R+ E+ + SD IQ
Sbjct: 1746 RGVALAAQGMYPEAISSFENALRYDPRSAESALNKAIALHSLGRDEESILASDIALGIQ- 1804
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW +G A L +A+ S++LE + + E G+ + + + A
Sbjct: 1805 -PDFAEAWYYKGVALETLKRYADAVPAFSRSLELDSTTTHAWFEMGLCLVELQRYEEAAG 1863
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWG------ 555
+ L + AY + G AL+ +G+Y++A A A+ + D L A G
Sbjct: 1864 AFDHVLGLVSDYPPAYFHKGRALALLGKYEEAVVAFDSALAITPGDAIVLSAKGHALESL 1923
Query: 556 -------------------------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
HL Y + EKA+ + L ID A
Sbjct: 1924 KKYREAAAAFEEATSVNPAAADDYYHLGLAYIEQHRDEKAIAAFAKTLRIDPENPDALFQ 1983
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G++L L ++ +AI L + N LY R Y A+ +Y EA+
Sbjct: 1984 AGIVLARLEKYDEAIGLFDRYLELGKENAGILYERGCAYFALQKYSEAI 2032
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 112/263 (42%), Gaps = 34/263 (12%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA +Y AI F+++L +P +AL G A A ++ + AI F +++ +P
Sbjct: 794 KGIALAQRERYDDAIKTFERLLTLEPENAQALYYLGIAYAGRQRFDEAIVAFERSLEIDP 853
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A G + +A++ S+AL + ++A + +GI + + A+ L
Sbjct: 854 KNPLAHHYMGVSLVECDRYDDALRSFSEALLLDASNASTYYYQGIAFLQSHQYEEAIAAL 913
Query: 507 SACVKLDKENKSAYTYLGLALSSIGE---------------------------------- 532
+ +++D A+TYLG++L+ +G
Sbjct: 914 NTAIRMDTSLSDAFTYLGISLARLGRHDEAVAALNRSLAANPSQMEALVCRGESLMVLQR 973
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y A E + + L+ N + AW + L + AL +VL I+ + A+ +G
Sbjct: 974 YADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVYTRVLEINPGNADAWARKG 1033
Query: 593 LLLHGLGQHKKAIKDLSSGLGID 615
+LL LG+ +A+ S L I+
Sbjct: 1034 VLLQDLGRTAEAVTAFSKALDIN 1056
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 111/269 (41%), Gaps = 14/269 (5%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV L RG+A + G++ AIS + + L+ P +A G + + AI+ F
Sbjct: 3371 SVQGWLHRGMALFDLGRFNDAISSYKKALEIGPTNADAWYLVGRSYYALNTYDEAIAAFD 3430
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A+ EAW +G+ A+G+ EA+ L P + + +G+ K +
Sbjct: 3431 RALDLQGEFAEAWYYKGRTLFAMGKYGEAVSAYDSTLVLRPKHDEAFYHKGMALLKLQRA 3490
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AV ++L +T G+AL+++ +K A + KAI LDR A+
Sbjct: 3491 GDAVSAFDQALRLRPNFSYIWTGKGMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGL 3550
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL------- 612
Y L + A+ + L ++A++ +G L G+ +AI L
Sbjct: 3551 SYLSLGRYQDAIRNFEATLVQHPSCARAFYAKGRALCGVSMFHEAITSFDKALSEQSDYP 3610
Query: 613 ------GIDPSNIECLYLRASCY-HAIGE 634
GI +N+E CY HA+ +
Sbjct: 3611 EAWLYRGIAEANLEEFEEALDCYNHALAQ 3639
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 108/271 (39%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ S + +G A ++ G +AI + L+ P R A A
Sbjct: 2578 CFDRVVTSDTGCAQAWFRKGSALLSNGDLRAAIEALTKALELKPDNANGWYDRAVALAGL 2637
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E +I + A+ NP A+ +G A + LG +AI+ A +P A E
Sbjct: 2638 GRYEESIPSYDRALSLNPKYTSAYFDKGSALSRLGRDRQAIEAFEMASAIDPEFAVAYLE 2697
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G+ + AV A + LD N A GLAL+++ ++ A A+++D
Sbjct: 2698 KGLALARLSKNKEAVAAFDATLALDPANVPALFNKGLALANLKKFADAITVFDAALRIDA 2757
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
EAW L + + A+ L ID ++ +G+ L G++ +A+
Sbjct: 2758 KHYEAWFAKGYAQSRLRHYDDAVGAFDHALAIDPGRYAVWYEKGVALARAGKNDEAVAAF 2817
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
S + D E Y + +GE +AV
Sbjct: 2818 SEAIARDDKKPEAQYEKGRALLELGEDEQAV 2848
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY A+S +D L P + EA +G A + A+S F +A++ P+ W
Sbjct: 3454 GKYGEAVSAYDSTLVLRPKHDEAFYHKGMALLKLQRAGDAVSAFDQALRLRPNFSYIWTG 3513
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A AAL +AI +KA+ + + ++ G+ + A+ + A +
Sbjct: 3514 KGMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGRYQDAIRNFEATLVQHP 3573
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
A+ G AL + + +A + KA+ ++ EAW + +L E+AL+C
Sbjct: 3574 SCARAFYAKGRALCGVSMFHEAITSFDKALSEQSDYPEAWLYRGIAEANLEEFEEALDCY 3633
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
L ++ ++ A +G L L + +A+ + L I P + + Y + +
Sbjct: 3634 NHALAQNESYATALLNKGRALIHLERTGEALAAIEKVLTIQPESADAFYYKGRAH 3688
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 14/263 (5%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R+ +G A + ++ A F +IL E P EA I AR ++ D+TE I+
Sbjct: 1607 RMHKGEALLFISRFRDATKEFGKILTEHPDNAEAWIKMARARF-------SLGDYTEVIE 1659
Query: 444 S-------NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ N + EA RG A+ LG EA++ L++A + + + ++ G K
Sbjct: 1660 ACDHALRFNADSAEALLYRGLAQYELGRYEEAVESLARAEQIDSHLEQAVYHLGAALLKL 1719
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ + A+ + L + +A+ G+AL++ G Y +A + A++ D E+ +
Sbjct: 1720 ERYGDAIPAFDRVLSLKPDQATAHHLRGVALAAQGMYPEAISSFENALRYDPRSAESALN 1779
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
L E+++ L I F++A++ +G+ L L ++ A+ S L +D
Sbjct: 1780 KAIALHSLGRDEESILASDIALGIQPDFAEAWYYKGVALETLKRYADAVPAFSRSLELDS 1839
Query: 617 SNIECLYLRASCYHAIGEYREAV 639
+ + C + Y EA
Sbjct: 1840 TTTHAWFEMGLCLVELQRYEEAA 1862
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 117/253 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G++ +G Y +I +D+ L+ DP E+ + + + + E A++ +AI+ P
Sbjct: 1474 KGVSLAAQGLYQDSIYAYDRALECDPGSGESALNKAMSLHNLGQDEDALAAAVKAIEIQP 1533
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW+ RG + LG E+++ L AL +P +A + +++G + A+
Sbjct: 1534 DFAEAWRYRGLILSNLGRYQESVEALDHALAGDPKNARVNYQKGRAFDGLGQYENAISAY 1593
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A ++ + A + G AL I ++ A + K + + EAW + + L +
Sbjct: 1594 DAALQAQPDCIPARMHKGEALLFISRFRDATKEFGKILTEHPDNAEAWIKMARARFSLGD 1653
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ +E L + ++A RGL + LG++++A++ L+ ID + +Y
Sbjct: 1654 YTEVIEACDHALRFNADSAEALLYRGLAQYELGRYEEAVESLARAEQIDSHLEQAVYHLG 1713
Query: 627 SCYHAIGEYREAV 639
+ + Y +A+
Sbjct: 1714 AALLKLERYGDAI 1726
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 83/193 (43%)
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S EA R+G LG EA+ +AL P + +GI + + A++
Sbjct: 4 SDAEALMRQGTELYDLGRHQEAVVMFDRALTLFPKLPKAHYFKGIALYDLGRYEDALDSY 63
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ LD + +++ L+ IG K+A +A + I L + EAW +L
Sbjct: 64 DHALALDPSDINSWYNKAATLAQIGRNKEALDACDRLIALRFDNAEAWILKGISLYELGR 123
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
A+ L ID ++K Y+ +G+ L LG+H +AI +GI P + Y
Sbjct: 124 FRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKAVGIVPEYAKAYYNMG 183
Query: 627 SCYHAIGEYREAV 639
+ IG Y EA+
Sbjct: 184 ISLYEIGRYDEAL 196
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 112/255 (43%), Gaps = 2/255 (0%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F R +A + GKY A+ FD L P L +G A ++ A + F EA
Sbjct: 1880 FHKGRALALL--GKYEEAVVAFDSALAITPGDAIVLSAKGHALESLKKYREAAAAFEEAT 1937
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
NP+A + + G A +AI +K L +P + D L + GIV + + ++ A
Sbjct: 1938 SVNPAAADDYYHLGLAYIEQHRDEKAIAAFAKTLRIDPENPDALFQAGIVLARLEKYDEA 1997
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ ++L KEN G A ++ +Y +A + +A+ LD N + A Q
Sbjct: 1998 IGLFDRYLELGKENAGILYERGCAYFALQKYSEAIASFDRALALDANHIGALVKKGQSRA 2057
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+L E+A+ +V+ +D A+ + G L L +++ A+ L L D +N
Sbjct: 2058 NLGQYEEAVTLFDRVITLDPENVIAHFVMGTALARLARYEDAVVALDRALEYDGNNARIY 2117
Query: 623 YLRASCYHAIGEYRE 637
+ + +G ++E
Sbjct: 2118 ACKGYSLYRLGRFKE 2132
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 115/253 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A + + A+S FDQ L+ P + G+G A A + AIS +T+AI +
Sbjct: 3480 KGMALLKLQRAGDAVSAFDQALRLRPNFSYIWTGKGMALAALDRHKDAISCYTKAIALDR 3539
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ + G + +LG +AI++ L P+ A + +G F+ A+
Sbjct: 3540 KDSRAYYQAGLSYLSLGRYQDAIRNFEATLVQHPSCARAFYAKGRALCGVSMFHEAITSF 3599
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + A+ Y G+A +++ E+++A + + A+ + ++ A + + L
Sbjct: 3600 DKALSEQSDYPEAWLYRGIAEANLEEFEEALDCYNHALAQNESYATALLNKGRALIHLER 3659
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ +AL +++VL I + A++ +G Q AI + L I+ E Y +
Sbjct: 3660 TGEALAAIEKVLTIQPESADAFYYKGRAHLNRRQDDDAIDAFNRALAINRQFAEAHYYKG 3719
Query: 627 SCYHAIGEYREAV 639
+ G+Y EAV
Sbjct: 3720 TALARKGQYEEAV 3732
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 110/253 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + +Y A+ FD L P Y A +G + A Q + +I + A++ +P
Sbjct: 1440 RGAALMKLERYREAVQAFDAALLLLPKYAPAHHLKGVSLAAQGLYQDSIYAYDRALECDP 1499
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+GE+ + + LG+ +A+ KA+E +P+ A+ RG++ + +VE L
Sbjct: 1500 GSGESALNKAMSLHNLGQDEDALAAAVKAIEIQPDFAEAWRYRGLILSNLGRYQESVEAL 1559
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ D +N G A +G+Y+ A A+ A+Q + + A H + ++
Sbjct: 1560 DHALAGDPKNARVNYQKGRAFDGLGQYENAISAYDAALQAQPDCIPARMHKGEALLFISR 1619
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
A + ++L ++A+ LG + + I+ L + + E L R
Sbjct: 1620 FRDATKEFGKILTEHPDNAEAWIKMARARFSLGDYTEVIEACDHALRFNADSAEALLYRG 1679
Query: 627 SCYHAIGEYREAV 639
+ +G Y EAV
Sbjct: 1680 LAQYELGRYEEAV 1692
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 131/328 (39%), Gaps = 82/328 (25%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + ++ GK+ I+IFD++L +P +A +G A + + A F +A+ +
Sbjct: 2154 RGKSLLHNGKWEEGIAIFDKLLGIEPKSADAWYYKGIAYSHLSLHDEAQESFEQALTIDG 2213
Query: 447 SAGEAWKRRGQA---------------RAA-LGESV------------------EAIQDL 472
AW ++G RAA L SV EAI
Sbjct: 2214 ECATAWYQKGLVLFERERFEESLPAFERAAELAPSVQDYAFRNALCLFMLERYPEAISAF 2273
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL--------- 523
+AL P +A I + RG + +D+ A++ L+ + LD EN ++T+L
Sbjct: 2274 DRALTLGPETAVIQYYRGRALAEMRDYGVALDALNRAIGLDPEN--SFTWLAKGSVLLAQ 2331
Query: 524 ---------------------------GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
G A S +G ++A A+ A+ L+ + E
Sbjct: 2332 KDGAAAVAAFDQALVLDPKAADAAFFKGEAFSLLGNDEEAIHAYDLALSLESAYPEG--- 2388
Query: 557 LTQFYQDLA-----NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
F + LA N A+E + ++A++ +GL L LG+++KAI+ +
Sbjct: 2389 --SFKKGLALLRLKNYNGAIEAFDAAIQFVPGHAQAHYHKGLALFALGKNEKAIRSFTHA 2446
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
L DPS + L+ Y A+ Y A+
Sbjct: 2447 LEHDPSLSDALFHTGLAYAALSRYSPAL 2474
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y A+ F++ +++DP + G+G + A + + E ++ +P W R
Sbjct: 3896 GMYRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACAAYDEGLRRDPENAVGWTR 3955
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + A L + AI+ +AL +P+ + RG F A A + L
Sbjct: 3956 RGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALGQFEEAEASFRAMISLQP 4015
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ + G AL +Y++A + +A+++D + E W + L E+A C
Sbjct: 4016 DFVDAWIHQGRALQEQEKYQEALTSFKRALEIDPSRKEIWNDVGSTLDKLGKHEEAQICY 4075
Query: 575 QQVL 578
++ L
Sbjct: 4076 EKAL 4079
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 12/235 (5%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P AL +G A + A F +A++ +P +AW G A LG+ +AI
Sbjct: 615 PQNTSALYEKGVALMQLSRWKDAAEAFGQAVEQDPGLIDAWLAFGTCNANLGKFPDAIAA 674
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ + P + +GI F A+ L+ ++ ++ A+ Y G++L+++
Sbjct: 675 FDRVIALSPKNTQAFIHKGIALVTTGKFEEAIAALNRALEDAPRDERAWYYKGMSLAALQ 734
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD---LANSEKALECL---QQVLYIDKRFS 585
+++A + + ++++R A F+Q LA+ K LE + Q L ID
Sbjct: 735 RFEEAVRSFERVLEINRRCSPA------FFQKGNALAHLGKQLEAIISYDQALEIDPDNP 788
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ +G+ L ++ AIK L ++P N + LY Y + EA++
Sbjct: 789 VTLYQKGIALAQRERYDDAIKTFERLLTLEPENAQALYYLGIAYAGRQRFDEAIV 843
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A Q E AI+ F + ++ +P +A + G A L + EAI + LE
Sbjct: 1951 GLAYIEQHRDEKAIAAFAKTLRIDPENPDALFQAGIVLARLEKYDEAIGLFDRYLELGKE 2010
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+A IL+ERG F + ++ A+ + LD + A G + +++G+Y++A
Sbjct: 2011 NAGILYERGCAYFALQKYSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFD 2070
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+ I LD + A + LA E A+ L + L D ++ Y +G L+ LG+
Sbjct: 2071 RVITLDPENVIAHFVMGTALARLARYEDAVVALDRALEYDGNNARIYACKGYSLYRLGRF 2130
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
K++ + + +P + L R G++ E +
Sbjct: 2131 KESAESFAKAQKREPKDPFSLRFRGKSLLHNGKWEEGI 2168
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 38/244 (15%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G + G++ A+ +FD+ L P P+A +G A E A+ + A+
Sbjct: 10 MRQGTELYDLGRHQEAVVMFDRALTLFPKLPKAHYFKGIALYDLGRYEDALDSYDHALAL 69
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQ--DLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+PS +W + A +G + EA+ D AL F+ A IL +GI ++ F A
Sbjct: 70 DPSDINSWYNKAATLAQIGRNKEALDACDRLIALRFDNAEAWIL--KGISLYELGRFRDA 127
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ + +D Y G+AL+ +G + +A A+ KA+
Sbjct: 128 ISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKAVG----------------- 170
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
I ++KAY+ G+ L+ +G++ +A+ +DPS+
Sbjct: 171 -----------------IVPEYAKAYYNMGISLYEIGRYDEALGAFEKAHDLDPSDPWVW 213
Query: 623 YLRA 626
Y RA
Sbjct: 214 YYRA 217
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 106/287 (36%), Gaps = 34/287 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA + G+Y A+ +D L DP + + A + A+ I
Sbjct: 46 KGIALYDLGRYEDALDSYDHALALDPSDINSWYNKAATLAQIGRNKEALDACDRLIALRF 105
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW +G + LG +AI AL +P A + + +GI + A+
Sbjct: 106 DNAEAWILKGISLYELGRFRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAY 165
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---------RNFL------ 551
V + E AY +G++L IG Y +A A KA LD R F+
Sbjct: 166 GKAVGIVPEYAKAYYNMGISLYEIGRYDEALGAFEKAHDLDPSDPWVWYYRAFILAKQER 225
Query: 552 -----EAWGHLTQFYQD--------------LANSEKALECLQQVLYIDKRFSKAYHLRG 592
EA G F + L ++A + + + D A+ +G
Sbjct: 226 YAQAAEAAGVFLSFEPEHADIWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKG 285
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + +++ A L + P + Y R +G+YREAV
Sbjct: 286 FSLFDMERYEDATYALDKAAELSPQTTKIYYTRGKANQRLGKYREAV 332
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 6/256 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ V +Y A FD +L YP A +G A A + E A+ F A+ P
Sbjct: 1849 GLCLVELQRYEEAAGAFDHVLGLVSDYPPAYFHKGRALALLGKYEEAVVAFDSALAITPG 1908
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+G A +L + EA +A P +AD + G+ + A+ +
Sbjct: 1909 DAIVLSAKGHALESLKKYREAAAAFEEATSVNPAAADDYYHLGLAYIEQHRDEKAIAAFA 1968
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ---FYQDL 564
+++D EN A G+ L+ + +Y +A + ++L + E G L + Y L
Sbjct: 1969 KTLRIDPENPDALFQAGIVLARLEKYDEAIGLFDRYLELGK---ENAGILYERGCAYFAL 2025
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+A+ + L +D A +G LGQ+++A+ + +DP N+ ++
Sbjct: 2026 QKYSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFDRVITLDPENVIAHFV 2085
Query: 625 RASCYHAIGEYREAVI 640
+ + Y +AV+
Sbjct: 2086 MGTALARLARYEDAVV 2101
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 114/271 (42%), Gaps = 34/271 (12%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA + +Y AI+ + ++ D +A G + A + A++ ++ +NP
Sbjct: 896 QGIAFLQSHQYEEAIAALNTAIRMDTSLSDAFTYLGISLARLGRHDEAVAALNRSLAANP 955
Query: 447 SAGE----------------------------------AWKRRGQARAALGESVEAIQDL 472
S E AW ++G A L + +A+
Sbjct: 956 SQMEALVCRGESLMVLQRYADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVY 1015
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++ LE P +AD +G++ AV S + ++ + + G ALS++G+
Sbjct: 1016 TRVLEINPGNADAWARKGVLLQDLGRTAEAVTAFSKALDINAGIGGIWMHKGDALSTLGK 1075
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+A EA+ +A++LD + E W + DL + A++ + +++R + A+ +G
Sbjct: 1076 TSEAAEAYAEALKLDPDQEEGWIKGGRALFDLGRYQDAIDAFDNAIALNQRSTVAFLYKG 1135
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L + + +A++ L IDP N E Y
Sbjct: 1136 FSLEKINRAGEALQVFEVLLEIDPHNSEAHY 1166
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 110/287 (38%), Gaps = 34/287 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A + G+ A++ F + L D + +A G A + AI+ + + + P
Sbjct: 2834 KGRALLELGEDEQAVTSFTRALDLDTSFGDAAYYLGLALERVGKFTDAITAYDRMVAARP 2893
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV--- 503
+AW RG A LG +A+Q KA + EP++ +L G + F A+
Sbjct: 2894 DHSDAWYHRGIASERLGRDNDAVQAYEKARQIEPHNLPLLFADGRAWARLGQFEDAIHLF 2953
Query: 504 ---------------EDLSACVKLDKENKS------AYTYL----------GLALSSIGE 532
E A L + +++ A+T L GL+L ++
Sbjct: 2954 DIALGKEPGNGEILFEKAKALAALGRHDEAQEIFRLAFTQLTDNYEPAYLRGLSLLALER 3013
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y+ A+ A A+ L + E W N E A+ + + AY RG
Sbjct: 3014 YEDADMAFDAALSLSPDLPEIWEKKGGALMHAGNYEGAVAAFDHAISLLPDDPGAYLERG 3073
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L L ++ +A+ L ++P++ + R + +Y AV
Sbjct: 3074 RALAALNRNDEAVASFDQVLALEPADPVASFERGRALYYAAKYEHAV 3120
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA-------LSV 125
R + L HK I D+AL +DP+ AY +G AF ALG+ EEA +S+
Sbjct: 3954 TRRGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALGQFEEAEASFRAMISL 4013
Query: 126 WEKGYEHALHQSADLKQFLELEELLTAAKQ 155
+ +HQ L++ + +E LT+ K+
Sbjct: 4014 QPDFVDAWIHQGRALQEQEKYQEALTSFKR 4043
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 14 NKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLRNWSKAIRILD-SLLAQSYEIQD 71
++ + I ++ +R+D+ ++ A T I LA+L +A+ L+ SL A +++
Sbjct: 904 HQYEEAIAALNTAIRMDTSLSDAFTYLGISLARLG---RHDEAVAALNRSLAANPSQMEA 960
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
+ R L+ + + D+ L L+P ++ A++ KG A L +K++AL+V+ +
Sbjct: 961 LVCRGESLMVLQRYADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVYTR 1017
>gi|13472042|ref|NP_103609.1| hypothetical protein mll2209 [Mesorhizobium loti MAFF303099]
gi|14022787|dbj|BAB49395.1| mll2209 [Mesorhizobium loti MAFF303099]
Length = 658
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 122/253 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + +G Y AI+ + Q + D P G A + LE AI+D+++AI +
Sbjct: 176 RGNAYLRKGDYDQAITSYSQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDA 235
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA++ R A G++ +A+ D ++A+ +P A+ R + + +D++ A+ D
Sbjct: 236 NHAEAYRWRADAWVKRGDTDQALSDYTEAIRLDPGDAETFRNRARIWERKRDYDRAIADY 295
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + AY G S E +A ++KA D N++ A+ +L + D +
Sbjct: 296 DQAIAFAPNDAVAYNGRGWMWSLKHETDRAIVDYVKATAFDPNYVLAYDNLGLAWWDKGD 355
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++A+ Q + +D +++ AY+ RGL Q+ AI D + + ID + R
Sbjct: 356 LDRAISAFDQAVIVDPKYAPAYNDRGLARMDKNQYDLAIADYNMAILIDAGFVSAYRNRG 415
Query: 627 SCYHAIGEYREAV 639
+ ++ G++ A+
Sbjct: 416 NAWNRKGQFDYAI 428
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 8/231 (3%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A R A E + AI+D+ +AI NP EA+ RG + A+ D KA+
Sbjct: 69 AYFNRANALDRNGEFDRAIADYDKAIAFNPKDAEAFNNRGLIWGHKKDFDRALADYDKAI 128
Query: 477 EFEPNSADILHERGIVNFKFK-DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
E P A RG++ K D+ A+ D ++LD EN Y G A G+Y +
Sbjct: 129 ELNPQIAIAYANRGLIWNDIKHDYVKAIADFDKAIRLDPENNGLYNLRGNAYLRKGDYDQ 188
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A ++ +AI LD + +L + N E+A+ Q + +D ++AY R
Sbjct: 189 AITSYSQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAW 248
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY-------HAIGEYREAV 639
G +A+ D + + +DP + E RA + AI +Y +A+
Sbjct: 249 VKRGDTDQALSDYTEAIRLDPGDAETFRNRARIWERKRDYDRAIADYDQAI 299
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 114/235 (48%), Gaps = 1/235 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+R A G++ AI+ +D+ + +P EA RG +++ + A++D+ +AI+
Sbjct: 71 FNRANALDRNGEFDRAIADYDKAIAFNPKDAEAFNNRGLIWGHKKDFDRALADYDKAIEL 130
Query: 445 NPSAGEAWKRRGQARAALG-ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP A+ RG + + V+AI D KA+ +P + + + RG + D++ A+
Sbjct: 131 NPQIAIAYANRGLIWNDIKHDYVKAIADFDKAIRLDPENNGLYNLRGNAYLRKGDYDQAI 190
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
S + LD ++ + Y LGLA ++ G ++A + +AI LD N EA+ +
Sbjct: 191 TSYSQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAWVK 250
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++++AL + + +D ++ + R + + +AI D + P++
Sbjct: 251 RGDTDQALSDYTEAIRLDPGDAETFRNRARIWERKRDYDRAIADYDQAIAFAPND 305
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 106/252 (42%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A +G AI+ + Q + D + EA R A + + + A+SD+TEAI+ +P
Sbjct: 211 GLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAWVKRGDTDQALSDYTEAIRLDPG 270
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E ++ R + + AI D +A+ F PN A + RG + + + A+ D
Sbjct: 271 DAETFRNRARIWERKRDYDRAIADYDQAIAFAPNDAVAYNGRGWMWSLKHETDRAIVDYV 330
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
D AY LGLA G+ +A A +A+ +D + A+ D
Sbjct: 331 KATAFDPNYVLAYDNLGLAWWDKGDLDRAISAFDQAVIVDPKYAPAYNDRGLARMDKNQY 390
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+ A+ + ID F AY RG + GQ AI D + DP + + R
Sbjct: 391 DLAIADYNMAILIDAGFVSAYRNRGNAWNRKGQFDYAIADFDQAIDHDPDDADAYVGRGR 450
Query: 628 CYHAIGEYREAV 639
+Y +A+
Sbjct: 451 SRIYKADYTKAI 462
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A ++G AIS FDQ + DP Y A RG AR + + + AI+D+ AI +
Sbjct: 347 GLAWWDKGDLDRAISAFDQAVIVDPKYAPAYNDRGLARMDKNQYDLAIADYNMAILIDAG 406
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A++ RG A G+ AI D +A++ +P+ AD RG D+ A+ DL
Sbjct: 407 FVSAYRNRGNAWNRKGQFDYAIADFDQAIDHDPDDADAYVGRGRSRIYKADYTKAIADLD 466
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+++ ++ A+ GLA+ +Y A + +AI+L
Sbjct: 467 QAIRIGPKSARAHDTRGLAMVYKADYAGALADYDEAIRL 505
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++++ +Y AI+ ++ + D + A RG A + + + AI+DF +AI +P
Sbjct: 380 RGLARMDKNQYDLAIADYNMAILIDAGFVSAYRNRGNAWNRKGQFDYAIADFDQAIDHDP 439
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG++R + +AI DL +A+ P SA RG+ D+ A+ D
Sbjct: 440 DDADAYVGRGRSRIYKADYTKAIADLDQAIRIGPKSARAHDTRGLAMVYKADYAGALADY 499
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
++L +N SAY G+A G KA+
Sbjct: 500 DEAIRLSPKNASAYRNRGIASFYFGPPAKAQ 530
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 14/277 (5%)
Query: 376 SKSISVD------FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
S++IS+D +R R A V G A+S + + ++ DP E R +R
Sbjct: 228 SQAISLDANHAEAYRW-RADAWVKRGDTDQALSDYTEAIRLDPGDAETFRNRARIWERKR 286
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI+D+ +AI P+ A+ RG + E+ AI D KA F+PN
Sbjct: 287 DYDRAIADYDQAIAFAPNDAVAYNGRGWMWSLKHETDRAIVDYVKATAFDPNYVLAYDNL 346
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ + D + A+ V +D + AY GLA +Y A + AI +D
Sbjct: 347 GLAWWDKGDLDRAISAFDQAVIVDPKYAPAYNDRGLARMDKNQYDLAIADYNMAILIDAG 406
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
F+ A+ + + + A+ Q + D + AY RG + KAI DL
Sbjct: 407 FVSAYRNRGNAWNRKGQFDYAIADFDQAIDHDPDDADAYVGRGRSRIYKADYTKAIADLD 466
Query: 610 SGLGIDPSNIE-------CLYLRASCYHAIGEYREAV 639
+ I P + + +A A+ +Y EA+
Sbjct: 467 QAIRIGPKSARAHDTRGLAMVYKADYAGALADYDEAI 503
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +G++ AI+ FDQ + DP +A +GRG +R ++ + AI+D +AI+
Sbjct: 413 NRGNAWNRKGQFDYAIADFDQAIDHDPDDADAYVGRGRSRIYKADYTKAIADLDQAIRIG 472
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A RG A + A+ D +A+ P +A RGI +F F A D
Sbjct: 473 PKSARAHDTRGLAMVYKADYAGALADYDEAIRLSPKNASAYRNRGIASFYFGPPAKAQAD 532
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGE 532
+ + +L LA G+
Sbjct: 533 FEQAAAIKPGDSYHAIWLDLARRRNGQ 559
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 115/267 (43%), Gaps = 6/267 (2%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPM 413
+N RN +F K+I+ + + + RG+ ++ + A++ +D+ ++ +P
Sbjct: 74 ANALDRNGEFDRAIADYDKAIAFNPKDAEAFNNRGLIWGHKKDFDRALADYDKAIELNPQ 133
Query: 414 YPEALIGRG-TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
A RG + + AI+DF +AI+ +P + RG A G+ +AI
Sbjct: 134 IAIAYANRGLIWNDIKHDYVKAIADFDKAIRLDPENNGLYNLRGNAYLRKGDYDQAITSY 193
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
S+A+ + + G+ + A+ D S + LD + AY + A G+
Sbjct: 194 SQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAWVKRGD 253
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+A + +AI+LD E + + + ++ + ++A+ Q + + AY+ RG
Sbjct: 254 TDQALSDYTEAIRLDPGDAETFRNRARIWERKRDYDRAIADYDQAIAFAPNDAVAYNGRG 313
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ + +AI D DP+ +
Sbjct: 314 WMWSLKHETDRAIVDYVKATAFDPNYV 340
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D + RG +++ + Y AI+ DQ ++ P A RG A ++ + A++D+ E
Sbjct: 442 ADAYVGRGRSRIYKADYTKAIADLDQAIRIGPKSARAHDTRGLAMVYKADYAGALADYDE 501
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
AI+ +P A++ RG A G +A D +A +P
Sbjct: 502 AIRLSPKNASAYRNRGIASFYFGPPAKAQADFEQAAAIKP 541
>gi|398824104|ref|ZP_10582449.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. YR681]
gi|398225243|gb|EJN11520.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. YR681]
Length = 461
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 5/200 (2%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG QR LE A++D+ AI+ P +AW RG G++ +AI+DLS+AL +P
Sbjct: 147 RGVVYTNQRRLERALADYDRAIKLKPDYAQAWSDRGATYYLGGDNEKAIRDLSEALRLDP 206
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A RG K + +V D ++LD + Y GL+L+++G+Y +A +
Sbjct: 207 NRARSYTNRGAAYKKLGQLDKSVADDGEAIRLDPKVPEYYDNRGLSLAAMGKYDEAIADY 266
Query: 541 LKAIQL--DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+A++L NF G Q +L AL + L +D F++ Y+ R +L +
Sbjct: 267 DQALRLAPKPNFFTNRGDSYQLKGELG---AALGDYESALKLDPNFAQTYNNRAVLYKKM 323
Query: 599 GQHKKAIKDLSSGLGIDPSN 618
G+ +KA+ D + L +DP N
Sbjct: 324 GERRKALADYETALKLDPGN 343
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 1/178 (0%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
G +A++D+ +A+ + +A RG ++ D A DLS ++LD E+ AY
Sbjct: 86 GGLTQALRDIDRAITLDGKNAKAWRLRGDLLREAGGDLGRAAADLSKAIELDAEDAEAYE 145
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G+ ++ ++A + +AI+L ++ +AW Y ++EKA+ L + L +D
Sbjct: 146 LRGVVYTNQRRLERALADYDRAIKLKPDYAQAWSDRGATYYLGGDNEKAIRDLSEALRLD 205
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+++Y RG LGQ K++ D + +DP E R A+G+Y EA+
Sbjct: 206 PNRARSYTNRGAAYKKLGQLDKSVADDGEAIRLDPKVPEYYDNRGLSLAAMGKYDEAI 263
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ +++ + ++ DP PE RG + A + + AI+D+ +A++
Sbjct: 214 NRGAAYKKLGQLDKSVADDGEAIRLDPKVPEYYDNRGLSLAAMGKYDEAIADYDQALRLA 273
Query: 446 PSA------GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
P G++++ +G+ AALG D AL+ +PN A + R ++ K +
Sbjct: 274 PKPNFFTNRGDSYQLKGELGAALG-------DYESALKLDPNFAQTYNNRAVLYKKMGER 326
Query: 500 NAAVEDLSACVKLDKENKSA 519
A+ D +KLD N +A
Sbjct: 327 RKALADYETALKLDPGNDNA 346
>gi|426255522|ref|XP_004021397.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Ovis
aries]
Length = 805
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 170 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 228
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 229 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 288
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G +A+K+ L ++P N C Y++ + A+G++
Sbjct: 289 ALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 348
Query: 637 EAV 639
E +
Sbjct: 349 EGI 351
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 168 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 225
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 226 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 285
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + + A+++ C++L+ N+ GL+ ++G
Sbjct: 286 FQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 345
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 346 QFYEGIKAQTKVM 358
>gi|291402200|ref|XP_002717430.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 2
[Oryctolagus cuniculus]
Length = 812
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L++
Sbjct: 176 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQ 234
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 235 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 294
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A+G++
Sbjct: 295 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 354
Query: 637 EAV 639
E +
Sbjct: 355 EGI 357
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 174 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 231
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 232 RNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 291
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + A+++ C++L+ N+ GL+ ++G
Sbjct: 292 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 351
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 352 QFYEGIKAQTKVM 364
>gi|296472257|tpg|DAA14372.1| TPA: tetratricopeptide repeat domain 13 isoform 2 [Bos taurus]
Length = 805
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K
Sbjct: 169 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 227
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 228 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 287
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +++ + LRG++L+ G +A+K+ L ++P N C Y++ + A+G++
Sbjct: 288 ALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 347
Query: 637 EAV 639
E +
Sbjct: 348 EGI 350
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 4/193 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
ML+ S + N+ V ++K+ + RL RG YA+A F Q L+ +
Sbjct: 167 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 224
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A++ +G + L+ AI F EA++ +A+K GQA LG A +
Sbjct: 225 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 284
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
KAL N L RG++ + + A+++ C++L+ N+ GL+ ++G
Sbjct: 285 FQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 344
Query: 532 EYKKAEEAHLKAI 544
++ + +A K +
Sbjct: 345 QFYEGIKAQTKVM 357
>gi|254417606|ref|ZP_05031343.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196175628|gb|EDX70655.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 909
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI +N +Y AI+ +DQ + +P +A RG A E AI+ + +AI NP
Sbjct: 298 RGIVLINLKRYEEAIASYDQAIALNPDDYQAWNNRGVALGNLERYEEAIASYDQAIALNP 357
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG A L EAI +A+ P++ + + RG + + A+
Sbjct: 358 DDYQAWNNRGVALGNLERYEEAIASYDQAIALNPDNYEAWNNRGNTLRNLERYEEAIASY 417
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L+ +N A+ G L ++ Y++A ++ KA+ L+ + EAW + +L
Sbjct: 418 DKALALNPDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGGALGNLER 477
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A+ Q + ++ +S A++ RG L L ++++AI L ++P + Y R
Sbjct: 478 YEEAIASFDQAIDLNPDYSSAWNNRGNTLGNLERYEEAIASYDQALALNPDDSSAWYNRG 537
Query: 627 SCYHAIGEYREAVI 640
+ Y EA++
Sbjct: 538 VTLDDLERYEEAIV 551
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 145/307 (47%), Gaps = 7/307 (2%)
Query: 336 NKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQV 392
++SS+S E+ +KL F+ +L + N+ ++ + ++ +++ D + RGI
Sbjct: 214 DESSNSPETTAKLYFEHGLLFFSGNQDEK----ALASFDQAIALNPDDYQAWNRRGIVLR 269
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
+Y AI+ FDQ + +P Y +A GRG + E AI+ + +AI NP +AW
Sbjct: 270 RLERYEEAIASFDQAITLNPDYYKAWNGRGIVLINLKRYEEAIASYDQAIALNPDDYQAW 329
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG A L EAI +A+ P+ + RG+ + + A+ + L
Sbjct: 330 NNRGVALGNLERYEEAIASYDQAIALNPDDYQAWNNRGVALGNLERYEEAIASYDQAIAL 389
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ +N A+ G L ++ Y++A ++ KA+ L+ + EAW + ++L E+A+
Sbjct: 390 NPDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGNTLRNLERYEEAIA 449
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+ L ++ +A++ RG L L ++++AI + ++P R + +
Sbjct: 450 SYDKALALNPDNYEAWNNRGGALGNLERYEEAIASFDQAIDLNPDYSSAWNNRGNTLGNL 509
Query: 633 GEYREAV 639
Y EA+
Sbjct: 510 ERYEEAI 516
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 118/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N +Y AI+ +DQ + +P +A RG A E AI+ + +AI N
Sbjct: 331 NRGVALGNLERYEEAIASYDQAIALNPDDYQAWNNRGVALGNLERYEEAIASYDQAIALN 390
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG L EAI KAL P++ + + RG + + A+
Sbjct: 391 PDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGNTLRNLERYEEAIAS 450
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ +N A+ G AL ++ Y++A + +AI L+ ++ AW + +L
Sbjct: 451 YDKALALNPDNYEAWNNRGGALGNLERYEEAIASFDQAIDLNPDYSSAWNNRGNTLGNLE 510
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ Q L ++ S A++ RG+ L L ++++AI L ++P +
Sbjct: 511 RYEEAIASYDQALALNPDDSSAWYNRGVTLDDLERYEEAIVSYDQALALNPDDSSVWNNH 570
Query: 626 ASCYHAIGEYREAV 639
+ + Y EA+
Sbjct: 571 GNTLGNLDRYEEAI 584
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 115/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N +Y AI+ +D+ L +P EA RG A E AI+ F +AI N
Sbjct: 433 NRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGGALGNLERYEEAIASFDQAIDLN 492
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG L EAI +AL P+ + + RG+ + + A+
Sbjct: 493 PDYSSAWNNRGNTLGNLERYEEAIASYDQALALNPDDSSAWYNRGVTLDDLERYEEAIVS 552
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ ++ S + G L ++ Y++A ++ +AI L+ + W + DL
Sbjct: 553 YDQALALNPDDSSVWNNHGNTLGNLDRYEEAIASYDQAIALNPDDSSVWNNHGVTLDDLE 612
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ Q + ++ S ++ RG+ L L +++KAI + ++P + ++R
Sbjct: 613 RYEEAIASYDQAIALNPDDSNVWNNRGVTLGNLKKYEKAIASYDQAITLNPDDSSAWFMR 672
Query: 626 ASCYHAIGEYREAV 639
+ +Y EA+
Sbjct: 673 GIALRNLEKYEEAI 686
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 116/245 (47%), Gaps = 6/245 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + +Y AI +DQ L +P G E AI+ + +AI N
Sbjct: 535 NRGVTLDDLERYEEAIVSYDQALALNPDDSSVWNNHGNTLGNLDRYEEAIASYDQAIALN 594
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W G L EAI +A+ P+ +++ + RG+ K + A+
Sbjct: 595 PDDSSVWNNHGVTLDDLERYEEAIASYDQAIALNPDDSNVWNNRGVTLGNLKKYEKAIAS 654
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ ++ SA+ G+AL ++ +Y++A ++ +AI L+ +F +AW + ++L
Sbjct: 655 YDQAITLNPDDSSAWFMRGIALRNLEKYEEAIASYDQAIALNPDFYQAWFNRGNTLRNLE 714
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP------SNI 619
E+A+ Q + ++ S A+ +RG+ L L ++++AI + + + P +N+
Sbjct: 715 RYEEAIASYDQAIALNPDDSSAWFMRGIALGNLERYEEAIASFNQAIALTPDDSTAWNNL 774
Query: 620 ECLYL 624
LYL
Sbjct: 775 GFLYL 779
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N +Y AI+ FDQ + +P Y A RG E AI+ + +A+ N
Sbjct: 467 NRGGALGNLERYEEAIASFDQAIDLNPDYSSAWNNRGNTLGNLERYEEAIASYDQALALN 526
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG L EAI +AL P+ + + + G + A+
Sbjct: 527 PDDSSAWYNRGVTLDDLERYEEAIVSYDQALALNPDDSSVWNNHGNTLGNLDRYEEAIAS 586
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ ++ S + G+ L + Y++A ++ +AI L+ + W + +L
Sbjct: 587 YDQAIALNPDDSSVWNNHGVTLDDLERYEEAIASYDQAIALNPDDSNVWNNRGVTLGNLK 646
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
EKA+ Q + ++ S A+ +RG+ L L ++++AI + ++P + + R
Sbjct: 647 KYEKAIASYDQAITLNPDDSSAWFMRGIALRNLEKYEEAIASYDQAIALNPDFYQAWFNR 706
Query: 626 ASCYHAIGEYREAV 639
+ + Y EA+
Sbjct: 707 GNTLRNLERYEEAI 720
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 2/232 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQS 444
+RG+A N +Y AI+ +DQ + +P EA RG T R +R E AI+ + +A+
Sbjct: 365 NRGVALGNLERYEEAIASYDQAIALNPDNYEAWNNRGNTLRNLER-YEEAIASYDKALAL 423
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP EAW RG L EAI KAL P++ + + RG + + A+
Sbjct: 424 NPDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGGALGNLERYEEAIA 483
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ L+ + SA+ G L ++ Y++A ++ +A+ L+ + AW + DL
Sbjct: 484 SFDQAIDLNPDYSSAWNNRGNTLGNLERYEEAIASYDQALALNPDDSSAWYNRGVTLDDL 543
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
E+A+ Q L ++ S ++ G L L ++++AI + ++P
Sbjct: 544 ERYEEAIVSYDQALALNPDDSSVWNNHGNTLGNLDRYEEAIASYDQAIALNP 595
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 3/214 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +DQ + +P RG ++ E AI+ + +AI NP AW R
Sbjct: 613 RYEEAIASYDQAIALNPDDSNVWNNRGVTLGNLKKYEKAIASYDQAITLNPDDSSAWFMR 672
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L + EAI +A+ P+ RG + + A+ + L+ +
Sbjct: 673 GIALRNLEKYEEAIASYDQAIALNPDFYQAWFNRGNTLRNLERYEEAIASYDQAIALNPD 732
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ SA+ G+AL ++ Y++A + +AI L + AW +L Y +KA L
Sbjct: 733 DSSAWFMRGIALGNLERYEEAIASFNQAIALTPDDSTAWNNLGFLYLMQNQPQKAKSSLN 792
Query: 576 QVLYIDKRFSKAYHLRGL-LLHGLGQHKKAIKDL 608
+ L I+ F Y L L L+H + + K K L
Sbjct: 793 RSLQINANF--FYPLFNLGLVHVIDNNIKEAKRL 824
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE-IQ 70
RL + + I D+ + ++ A R + L +L+ + +AI D +A + + Q
Sbjct: 270 RLERYEEAIASFDQAITLNPDYYKAWNGRGIV--LINLKRYEEAIASYDQAIALNPDDYQ 327
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR LE ++ I D+A+ L+P QA+ +G A L R EEA++ +++
Sbjct: 328 AWNNRGVALGNLERYEEAIASYDQAIALNPDDYQAWNNRGVALGNLERYEEAIASYDQA 386
>gi|333986950|ref|YP_004519557.1| hypothetical protein MSWAN_0723 [Methanobacterium sp. SWAN-1]
gi|333825094|gb|AEG17756.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 401
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F VT K S+ + + +GKY A+ +++IL+ D Y A G+G
Sbjct: 2 FIVTVFDSFKKNSL---IKKAYNLTEQGKYQEALGCYNKILQTDLYYTNAWYGKGVVLGK 58
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ + +A++ +P+ W +G L + EA++ KALE +PN +
Sbjct: 59 LENYPESLECYDKALELDPNYFNVWYNKGYTFVKLEKYREALECYDKALELDPNYFGVWF 118
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G + ++ A+E ++LD + G AL+ +GEY +A +++ A+ +D
Sbjct: 119 NKGYALTELGEYLEALECYDEALELDPNYFGVWFNKGYALTELGEYSEAVKSYDTALGID 178
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ W + L +A+E + L I+ +F+ A+ RG L L +H +A++
Sbjct: 179 PSDATTWYNRGNILTKLKKYVEAIESYDKALEINPKFTYAWTGRGSALTELKKHLEAVES 238
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L IDP ++ + R A+G+Y EAV
Sbjct: 239 YDKALEIDPKHVLAWFNRGYSLAALGKYLEAV 270
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G V KY A+ +D+ L+ DP Y +G A E A+ + EA++ +
Sbjct: 85 NKGYTFVKLEKYREALECYDKALELDPNYFGVWFNKGYALTELGEYLEALECYDEALELD 144
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ W +G A LGE EA++ AL +P+ A + RG + K K + A+E
Sbjct: 145 PNYFGVWFNKGYALTELGEYSEAVKSYDTALGIDPSDATTWYNRGNILTKLKKYVEAIES 204
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ + A+T G AL+ + ++ +A E++ KA+++D + AW + L
Sbjct: 205 YDKALEINPKFTYAWTGRGSALTELKKHLEAVESYDKALEIDPKHVLAWFNRGYSLAALG 264
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+A++ + L ID + +G L LG++ A++ L IDP + LY +
Sbjct: 265 KYLEAVKSYDRALEIDPGDPITWFSKGYALAELGKYSDALESYDKALAIDPIDSIALYNK 324
Query: 626 ASCYHAIGEYREAV 639
A+ IG+Y EA+
Sbjct: 325 ANIMLEIGKYPEAL 338
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 126/271 (46%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I ++ + +G+ Y ++ +D+ L+ DP Y +G
Sbjct: 34 CYNKILQTDLYYTNAWYGKGVVLGKLENYPESLECYDKALELDPNYFNVWYNKGYTFVKL 93
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+ + +A++ +P+ W +G A LGE +EA++ +ALE +PN +
Sbjct: 94 EKYREALECYDKALELDPNYFGVWFNKGYALTELGEYLEALECYDEALELDPNYFGVWFN 153
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G + +++ AV+ + +D + + + G L+ + +Y +A E++ KA++++
Sbjct: 154 KGYALTELGEYSEAVKSYDTALGIDPSDATTWYNRGNILTKLKKYVEAIESYDKALEINP 213
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
F AW +L +A+E + L ID + A+ RG L LG++ +A+K
Sbjct: 214 KFTYAWTGRGSALTELKKHLEAVESYDKALEIDPKHVLAWFNRGYSLAALGKYLEAVKSY 273
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L IDP + + + +G+Y +A+
Sbjct: 274 DRALEIDPGDPITWFSKGYALAELGKYSDAL 304
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 2/207 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQS 444
+RG KY AI +D+ L+ +P + A GRG+A ++ LEA + + +A++
Sbjct: 187 NRGNILTKLKKYVEAIESYDKALEINPKFTYAWTGRGSALTELKKHLEA-VESYDKALEI 245
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P AW RG + AALG+ +EA++ +ALE +P +G + ++ A+E
Sbjct: 246 DPKHVLAWFNRGYSLAALGKYLEAVKSYDRALEIDPGDPITWFSKGYALAELGKYSDALE 305
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +D + A + IG+Y +A E+ KA+++D +++ AW + + L
Sbjct: 306 SYDKALAIDPIDSIALYNKANIMLEIGKYPEALESFDKALEIDPDYVNAWNDKGETFTKL 365
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLR 591
N ++AL+C ++ L +D F A R
Sbjct: 366 ENYQEALKCYEKALKLDPNFEDALKAR 392
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G A G+Y A+ +D+ L+ DP Y +G A E A+ + A+
Sbjct: 118 FNKGYALTELGEYLEALECYDEALELDPNYFGVWFNKGYALTELGEYSEAVKSYDTALGI 177
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+PS W RG L + VEAI+ KALE P RG + K AVE
Sbjct: 178 DPSDATTWYNRGNILTKLKKYVEAIESYDKALEINPKFTYAWTGRGSALTELKKHLEAVE 237
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++D ++ A+ G +L+++G+Y +A +++ +A+++D W +L
Sbjct: 238 SYDKALEIDPKHVLAWFNRGYSLAALGKYLEAVKSYDRALEIDPGDPITWFSKGYALAEL 297
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
ALE + L ID S A + + ++ +G++ +A++ L IDP +
Sbjct: 298 GKYSDALESYDKALAIDPIDSIALYNKANIMLEIGKYPEALESFDKALEIDPDYVNAWND 357
Query: 625 RASCYHAIGEYREAV 639
+ + + Y+EA+
Sbjct: 358 KGETFTKLENYQEAL 372
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 105/233 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G A G+Y+ A+ +D L DP RG ++ AI + +A++
Sbjct: 152 FNKGYALTELGEYSEAVKSYDTALGIDPSDATTWYNRGNILTKLKKYVEAIESYDKALEI 211
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP AW RG A L + +EA++ KALE +P RG + AV+
Sbjct: 212 NPKFTYAWTGRGSALTELKKHLEAVESYDKALEIDPKHVLAWFNRGYSLAALGKYLEAVK 271
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++D + + G AL+ +G+Y A E++ KA+ +D A + ++
Sbjct: 272 SYDRALEIDPGDPITWFSKGYALAELGKYSDALESYDKALAIDPIDSIALYNKANIMLEI 331
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ALE + L ID + A++ +G L +++A+K L +DP+
Sbjct: 332 GKYPEALESFDKALEIDPDYVNAWNDKGETFTKLENYQEALKCYEKALKLDPN 384
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L L N+ +++ D L ++ N+ + + +LE ++ + DKAL+LDP
Sbjct: 56 LGKLENYPESLECYDKALELDPNYFNVWYNKGYTFVKLEKYREALECYDKALELDPNYFG 115
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
+ KG A + LG EAL +++ E
Sbjct: 116 VWFNKGYALTELGEYLEALECYDEALE 142
>gi|296126637|ref|YP_003633889.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296018453|gb|ADG71690.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 804
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 121/252 (48%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + G Y AI + +I+++D R A+ E A+ D+ +AI+ NP
Sbjct: 300 GLIEYKLGNYKEAIKYYTKIIEKDEYISYIYYNRALAKEALELYEDALKDYDKAIELNPD 359
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
++ RG + + EA++D +KA+E E N A + + R ++ + + A+ED
Sbjct: 360 DTYSYNNRGLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRIHLYREALEDFD 419
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L EN Y + GL + E+ +A + KAI+L+ +++A+ Y N
Sbjct: 420 KAISLYDENSEFYYFRGLTNFYLNEFDEALKYINKAIELNNEYIDAYNERAIIYYRTENY 479
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
++A++ ++VL +D AY+ L L + A+K + + +D +++E Y RA
Sbjct: 480 DEAIKDFKKVLELDNENVYAYYHLALSYECLEDYDNAVKYYTKVIELDNNSLEAYYNRAL 539
Query: 628 CYHAIGEYREAV 639
I Y EA+
Sbjct: 540 AKMEINLYNEAI 551
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 109/208 (52%), Gaps = 4/208 (1%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ DF +AI E + RG L E EA++ ++KA+E D +ER I+
Sbjct: 414 ALEDFDKAISLYDENSEFYYFRGLTNFYLNEFDEALKYINKAIELNNEYIDAYNERAIIY 473
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ ++++ A++D ++LD EN AY +L L+ + +Y A + + K I+LD N LEA
Sbjct: 474 YRTENYDEAIKDFKKVLELDNENVYAYYHLALSYECLEDYDNAVKYYTKVIELDNNSLEA 533
Query: 554 WGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + L + +L N +A+E ++++ +DK + AY G+ + ++ K+I+ +
Sbjct: 534 YYNRALAKMEINLYN--EAIEDFKRIIELDKENTDAYLNIGICYDYMEEYNKSIEYYTKV 591
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ID ++ Y R A+ Y EA
Sbjct: 592 IEIDNKALDAYYNRGLSKVALKLYNEAF 619
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 121/284 (42%), Gaps = 40/284 (14%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ + + VD +R I++ N Y AI FD++++ P +A RG ++++ + E
Sbjct: 75 INITHNTLVDAYYNRAISKFNLKNYEEAIKDFDKVIELSPDKTDAYYNRGHSKSYLKRYE 134
Query: 433 AAISDFTEAIQSNPSAGEA---------------------------------------WK 453
I DF + ++ + EA +
Sbjct: 135 EGIEDFKKVLEFDEDDFEAVYYVGLGYFYLANYEEAIKNFDLALYLIEKTEEEYIADIYY 194
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG +++ L EA+ D +K ++ + ++ + + + F + A+ D ++LD
Sbjct: 195 YRGHSKSYLTRYEEALSDFNKLVQLREDDSEAFYFKALTEFYLGLYEEAINDFDISIELD 254
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQFYQDLANSEKALE 572
+AY + GL+ S++ Y +A E + KAI D N + + L N ++A++
Sbjct: 255 SNASNAYYFRGLSKSNLELYDEAREDYQKAIDFDPENIISIYNDAGLIEYKLGNYKEAIK 314
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+++ D+ S Y+ R L L ++ A+KD + ++P
Sbjct: 315 YYTKIIEKDEYISYIYYNRALAKEALELYEDALKDYDKAIELNP 358
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+F RG+ ++ A+ ++ ++ + Y +A R + AI DF +
Sbjct: 430 EFYYFRGLTNFYLNEFDEALKYINKAIELNNEYIDAYNERAIIYYRTENYDEAIKDFKKV 489
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ + A+ + L + A++ +K +E + NS + + R + + +N
Sbjct: 490 LELDNENVYAYYHLALSYECLEDYDNAVKYYTKVIELDNNSLEAYYNRALAKMEINLYNE 549
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+ED ++LDKEN AY +G+ + EY K+ E + K I++D L+A+
Sbjct: 550 AIEDFKRIIELDKENTDAYLNIGICYDYMEEYNKSIEYYTKVIEIDNKALDAY 602
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 14/234 (5%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AIS++D+ E RG + E + A+ +AI+ N +A+ R
Sbjct: 421 AISLYDEN-------SEFYYFRGLTNFYLNEFDEALKYINKAIELNNEYIDAYNERAIIY 473
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
EAI+D K LE + + + + +D++ AV+ + ++LD + A
Sbjct: 474 YRTENYDEAIKDFKKVLELDNENVYAYYHLALSYECLEDYDNAVKYYTKVIELDNNSLEA 533
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y LA I Y +A E + I+LD+ +A+ ++ Y + K++E +V+
Sbjct: 534 YYNRALAKMEINLYNEAIEDFKRIIELDKENTDAYLNIGICYDYMEEYNKSIEYYTKVIE 593
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
ID + AY+ RGL L + +A +D + I+ + YL A Y+ IG
Sbjct: 594 IDNKALDAYYNRGLSKVALKLYNEAFEDFIRAIDINSN-----YLNA--YNGIG 640
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 15/216 (6%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R I Y AI F ++L+ D A + + + A+ +T+ I+ +
Sbjct: 469 RAIIYYRTENYDEAIKDFKKVLELDNENVYAYYHLALSYECLEDYDNAVKYYTKVIELDN 528
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ EA+ R A+ + EAI+D + +E + + D GI +++N ++E
Sbjct: 529 NSLEAYYNRALAKMEINLYNEAIEDFKRIIELDKENTDAYLNIGICYDYMEEYNKSIEYY 588
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +++D + AY GL+ ++ Y +A E ++AI ++ N+L A+ + +N
Sbjct: 589 TKVIEIDNKALDAYYNRGLSKVALKLYNEAFEDFIRAIDINSNYLNAYNGIGFSKTKYSN 648
Query: 567 SE-------KALECLQQVLYIDKRFSKAYHLRGLLL 595
+E KA+E L L Y+ +GL L
Sbjct: 649 NELKKGNINKAIELLNDAL--------VYYNKGLAL 676
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 49 LRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
L N+ +AI+ ++ + I I NRA LEL++ ++D DKA++L+P +Y
Sbjct: 306 LGNYKEAIKYYTKIIEKDEYISYIYYNRALAKEALELYEDALKDYDKAIELNPDDTYSYN 365
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G + + +EAL + K E
Sbjct: 366 NRGLIKNEMQMYDEALEDYNKAIE 389
>gi|330508351|ref|YP_004384779.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929159|gb|AEB68961.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 440
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 126/253 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A ++GKY AI +D+ ++ DP A +G A A Q + + AI + EAI+ +P
Sbjct: 30 QGVALADQGKYDEAIKAYDEAIRLDPTIAAAWSNKGVAFADQGKHDEAIEAYDEAIRLDP 89
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ AW +G + A G+ EAI+ +A+ +P A +G K K ++ +++
Sbjct: 90 TDAAAWGNKGASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAY 149
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L+ + G +L+ G+Y +A EA+ +AI+LD + AWG+ D
Sbjct: 150 DEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGK 209
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++A+E + + +D + + +G+ L G+H +AI+ + +DP++ +
Sbjct: 210 YDEAIEAYDEAIRLDPTDAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTDAAVWGNKG 269
Query: 627 SCYHAIGEYREAV 639
G+Y EA+
Sbjct: 270 VSLVDQGKYDEAI 282
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 129/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G + ++GKY AI +D+ ++ DP A +G + Q++ + +I + EAI N
Sbjct: 97 NKGASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAYDEAIGLN 156
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W +G++ A G+ EAI+ +A+ +P + +G+ ++ A+E
Sbjct: 157 PVLAEPWIGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEA 216
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD + + + G++L+ G++ +A EA+ +AI+LD WG+ D
Sbjct: 217 YDEAIRLDPTDAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQG 276
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+E + + +D + A+ +G+ L G++ +AI+ + +DP++ + +
Sbjct: 277 KYDEAIEAYDEAIRLDPANAAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDATAWFNK 336
Query: 626 ASCYHAIGEYREAV 639
+ + +Y E++
Sbjct: 337 GNSLNKQKKYDESI 350
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 122/246 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G + ++GKY AI +D+ ++ DP A +G + A Q + + AI + EAI+
Sbjct: 164 IGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRL 223
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ W +G + A G+ EAI+ +A+ +P A + +G+ ++ A+E
Sbjct: 224 DPTDAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIE 283
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++LD N +A+ G++L+ G+Y +A EA+ +AI+LD AW +
Sbjct: 284 AYDEAIRLDPANAAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDATAWFNKGNSLNKQ 343
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+++++ + + ++ ++ + +G L G+H +AI+ + +D ++ Y
Sbjct: 344 KKYDESIKAYDEAIRLNPDLAEPWIGKGNSLDDQGKHDEAIQAYDEAIRLDSTDANAWYN 403
Query: 625 RASCYH 630
+ H
Sbjct: 404 KGVVLH 409
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 127/258 (49%), Gaps = 7/258 (2%)
Query: 389 IAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
IA N+G KY +I +D+ + +P+ E IG+G + A Q + + AI + EA
Sbjct: 127 IAWFNKGNSLNKQKKYDESIKAYDEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEAYDEA 186
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ +P+ AW +G + A G+ EAI+ +A+ +P A + +G+ +
Sbjct: 187 IRLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNKGVSLADQGKHDE 246
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E ++LD + + + G++L G+Y +A EA+ +AI+LD AWG+
Sbjct: 247 AIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDPANAAAWGNKGVSL 306
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
D ++A+E + + +D + A+ +G L+ ++ ++IK + ++P E
Sbjct: 307 ADQGKYDEAIEAYDEAIRLDPTDATAWFNKGNSLNKQKKYDESIKAYDEAIRLNPDLAEP 366
Query: 622 LYLRASCYHAIGEYREAV 639
+ + G++ EA+
Sbjct: 367 WIGKGNSLDDQGKHDEAI 384
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 126/254 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A ++GK+ AI +D+ ++ DP A +G + A Q + + AI + EAI+ +
Sbjct: 63 NKGVAFADQGKHDEAIEAYDEAIRLDPTDAAAWGNKGASLADQGKYDEAIEAYDEAIRLD 122
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW +G + + E+I+ +A+ P A+ +G ++ A+E
Sbjct: 123 PTDAIAWFNKGNSLNKQKKYDESIKAYDEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEA 182
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD N +A+ G++L+ G+Y +A EA+ +AI+LD WG+ D
Sbjct: 183 YDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNKGVSLADQG 242
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+E + + +D + + +G+ L G++ +AI+ + +DP+N +
Sbjct: 243 KHDEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDPANAAAWGNK 302
Query: 626 ASCYHAIGEYREAV 639
G+Y EA+
Sbjct: 303 GVSLADQGKYDEAI 316
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 90/190 (47%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
E W +G A A G+ EAI+ +A+ +P A +G+ + A+E
Sbjct: 25 EDWFYQGVALADQGKYDEAIKAYDEAIRLDPTIAAAWSNKGVAFADQGKHDEAIEAYDEA 84
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++LD + +A+ G +L+ G+Y +A EA+ +AI+LD AW + ++
Sbjct: 85 IRLDPTDAAAWGNKGASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDE 144
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
+++ + + ++ ++ + +G L G++ +AI+ + +DP+N+ +
Sbjct: 145 SIKAYDEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSL 204
Query: 630 HAIGEYREAV 639
G+Y EA+
Sbjct: 205 ADQGKYDEAI 214
>gi|435850371|ref|YP_007311957.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
gi|433661001|gb|AGB48427.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
Length = 504
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 129/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA + KY AI +D+ + +P + A +G + + E AI F +A N
Sbjct: 135 NKGIALFHIKKYEEAIQAYDEATELEPRFAMAWYNKGYVLYYTKRYEEAIQAFDKATGIN 194
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+AW +G + LG + EA++ L+ A+ +P + L +G + + + + A+
Sbjct: 195 KKDAKAWNYKGVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLLNQMRRYEEAIRV 254
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ ++ A+ Y G AL+ +G+ ++A +A KAIQLD E W + ++
Sbjct: 255 CDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYKGTALYEMK 314
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
EKALE L + I+ ++++A++ +G + + +++ AI+ + ++P N +
Sbjct: 315 EYEKALENLNKATEINPQYAEAWNDKGRAHYNINEYENAIQAFDKVIELEPQNDAAWDSK 374
Query: 626 ASCYHAIGEYREAV 639
+ + EY EA+
Sbjct: 375 GNSLRRMAEYDEAI 388
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 3/272 (1%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
FCV I S +G E KY+ +I FD+ ++ +P +A G+G A +
Sbjct: 18 FCVGCIGTDDSKEF---TKKGNELFEEEKYSESIEAFDKAIELNPQNADAWAGKGMALSE 74
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ E AI + +AIQ P+ + W +G A +G EAIQ KA+E +P +
Sbjct: 75 TGKNEEAIQAYDKAIQLKPNNVKFWSEKGIALRKMGRYEEAIQAYDKAIELDPLDGFAWY 134
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+GI F K + A++ +L+ A+ G L Y++A +A KA ++
Sbjct: 135 NKGIALFHIKKYEEAIQAYDEATELEPRFAMAWYNKGYVLYYTKRYEEAIQAFDKATGIN 194
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ +AW + Y +L + +A+E L + +D ++S A +G LL+ + ++++AI+
Sbjct: 195 KKDAKAWNYKGVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLLNQMRRYEEAIRV 254
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ I+P + + + + +G+ EA+
Sbjct: 255 CDQAIEIEPQDAKAWNYKGYALNEMGKNEEAI 286
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 136/269 (50%), Gaps = 3/269 (1%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T I+K + + +++ G++ + G A+ + + DP Y AL +G R
Sbjct: 191 TGINKKDAKAWNYK---GVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLLNQMRR 247
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AI +AI+ P +AW +G A +G++ EAIQ KA++ +P A+I + +G
Sbjct: 248 YEEAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYKG 307
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ K++ A+E+L+ +++ + A+ G A +I EY+ A +A K I+L+
Sbjct: 308 TALYEMKEYEKALENLNKATEINPQYAEAWNDKGRAHYNINEYENAIQAFDKVIELEPQN 367
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
AW + +A ++A++ + + ++ + S + +G L+G+G+ ++A +
Sbjct: 368 DAAWDSKGNSLRRMAEYDEAIQAYDKAIELNPQNSWTWMHKGYTLYGMGKLEEAEQVFDK 427
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++P N + Y + + +G+ E++
Sbjct: 428 VIELNPENSDAWYSKGNTLRRMGKIDESI 456
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 126/260 (48%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ D +G+A GK AI +D+ ++ P + +G A E AI +
Sbjct: 61 NADAWAGKGMALSETGKNEEAIQAYDKAIQLKPNNVKFWSEKGIALRKMGRYEEAIQAYD 120
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ +P G AW +G A + + EAIQ +A E EP A + +G V + K +
Sbjct: 121 KAIELDPLDGFAWYNKGIALFHIKKYEEAIQAYDEATELEPRFAMAWYNKGYVLYYTKRY 180
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A++ ++K++ A+ Y G++ +G +A EA AI LD + A +
Sbjct: 181 EEAIQAFDKATGINKKDAKAWNYKGVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGY 240
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ E+A+ Q + I+ + +KA++ +G L+ +G++++AI+ + +DP +
Sbjct: 241 LLNQMRRYEEAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDA 300
Query: 620 ECLYLRASCYHAIGEYREAV 639
E Y + + + + EY +A+
Sbjct: 301 EIWYYKGTALYEMKEYEKAL 320
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI + DQ ++ +P +A +G A + E AI F +AIQ +P E W +
Sbjct: 247 RYEEAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYK 306
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + E +A+++L+KA E P A+ +++G ++ ++ A++ ++L+ +
Sbjct: 307 GTALYEMKEYEKALENLNKATEINPQYAEAWNDKGRAHYNINEYENAIQAFDKVIELEPQ 366
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N +A+ G +L + EY +A +A+ KAI+L+ W H + E+A +
Sbjct: 367 NDAAWDSKGNSLRRMAEYDEAIQAYDKAIELNPQNSWTWMHKGYTLYGMGKLEEAEQVFD 426
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+V+ ++ S A++ +G L +G+ ++I+ + ++P Y RA G+
Sbjct: 427 KVIELNPENSDAWYSKGNTLRRMGKIDESIQAYDKAIELNPDYAVAWYNRAIALDQAGKG 486
Query: 636 REA 638
EA
Sbjct: 487 TEA 489
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 107/218 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A GK AI FD+ ++ DP+ E +GTA +E E A+ + +A + NP
Sbjct: 272 KGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYKGTALYEMKEYEKALENLNKATEINP 331
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW +G+A + E AIQ K +E EP + +G + +++ A++
Sbjct: 332 QYAEAWNDKGRAHYNINEYENAIQAFDKVIELEPQNDAAWDSKGNSLRRMAEYDEAIQAY 391
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ +N + + G L +G+ ++AE+ K I+L+ +AW + +
Sbjct: 392 DKAIELNPQNSWTWMHKGYTLYGMGKLEEAEQVFDKVIELNPENSDAWYSKGNTLRRMGK 451
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+++++ + + ++ ++ A++ R + L G+ +A
Sbjct: 452 IDESIQAYDKAIELNPDYAVAWYNRAIALDQAGKGTEA 489
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY- 130
+ N+ + +Q+ ++ IR CD+A++++P +A+ KG A + +G+ EEA+ ++K
Sbjct: 235 LSNKGYLLNQMRRYEEAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQ 294
Query: 131 ------EHALHQSADLKQFLELEELLTAAKQDRSVTCEY-----DVSNSMSSLTVSESGL 179
E ++ L + E E+ L + + +Y D + ++ E+ +
Sbjct: 295 LDPLDAEIWYYKGTALYEMKEYEKALENLNKATEINPQYAEAWNDKGRAHYNINEYENAI 354
Query: 180 NANDKMSE 187
A DK+ E
Sbjct: 355 QAFDKVIE 362
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G GK A +FD++++ +P +A +G +++ +I + +AI+
Sbjct: 406 MHKGYTLYGMGKLEEAEQVFDKVIELNPENSDAWYSKGNTLRRMGKIDESIQAYDKAIEL 465
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
NP AW R A G+ EA S+A E
Sbjct: 466 NPDYAVAWYNRAIALDQAGKGTEAAASYSRAKEL 499
>gi|304314872|ref|YP_003850019.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
gi|302588331|gb|ADL58706.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
Length = 406
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 127/245 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ +++ L+ +P +A +G+ + ++ + A+ F +AI+ NP AW
Sbjct: 132 GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGT 191
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G L EA++ K L+ P + +G+V + ++ ++E ++++
Sbjct: 192 KGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINP 251
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G+ LS +G Y++A E + KA+++D + W + ++L E ALEC
Sbjct: 252 KLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDALECF 311
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q+ L I+ F+ A+ +G++L L + ++++K L ++P N Y++ +G+
Sbjct: 312 QKALEINPEFADAWKWKGIILEDLKEPEESLKCYKKALKLNPQNKTLWYMQGKTLQKLGK 371
Query: 635 YREAV 639
++EA+
Sbjct: 372 HKEAL 376
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 121/248 (48%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I K+ + ++G+ G+Y A+ +++ LK +P Y A +
Sbjct: 72 CYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKEL 131
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+ + +A+Q NP +AW +G L + +A++ KA+E P +
Sbjct: 132 GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGT 191
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+GI K + A++ ++L+ ++ A+ GL + +G Y ++ E + KA+Q++
Sbjct: 192 KGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINP 251
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
EAW + +L E+ALEC ++ L ID K ++ +GL+L LG+++ A++
Sbjct: 252 KLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDALECF 311
Query: 609 SSGLGIDP 616
L I+P
Sbjct: 312 QKALEINP 319
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 109/213 (51%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
F++ ++ +P A +G + E A+ + + +Q NP +AW +G LG
Sbjct: 175 FEKAIELNPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELG 234
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
E+++ KAL+ P A+ + +G+V + + A+E +++D E+ +
Sbjct: 235 RYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNK 294
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
GL L +G+Y+ A E KA++++ F +AW +DL E++L+C ++ L ++ +
Sbjct: 295 GLVLEELGKYEDALECFQKALEINPEFADAWKWKGIILEDLKEPEESLKCYKKALKLNPQ 354
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++++G L LG+HK+A+K L IDP
Sbjct: 355 NKTLWYMQGKTLQKLGKHKEALKCYEKSLKIDP 387
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 125/240 (52%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ +++ILK +P EA +G + A+ + +A++ NP AW +
Sbjct: 69 ALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVL 128
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG EA++ KAL+ P AD + +G V K + A++ ++L+ +N A
Sbjct: 129 KELGRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRA 188
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G+ L ++ Y++A + + K +QL+ +AW + + +L +++LEC ++ L
Sbjct: 189 WGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQ 248
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I+ + ++A++ +G++L LG++++A++ L IDP + + + +G+Y +A+
Sbjct: 249 INPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDAL 308
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 126/257 (49%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ L+ G + + +GKY A+ F + LK P PE L + E A+ + + +
Sbjct: 18 WHLAGGRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEKIL 77
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
++NP EAW +G LG EA++ KAL+ P A + + +V + ++ A
Sbjct: 78 KNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEA 137
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E ++++ + A+ G L + +YKKA + KAI+L+ AWG
Sbjct: 138 LECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGTKGITLH 197
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+L E+AL+C +VL ++ + KA++ +GL+ + LG++ ++++ L I+P E
Sbjct: 198 NLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAW 257
Query: 623 YLRASCYHAIGEYREAV 639
+ +G Y EA+
Sbjct: 258 NNKGVVLSELGRYEEAL 274
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N+ +++L + + +KALQ++P L +A+ KG S LGR EEAL +EK E
Sbjct: 225 NKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALE 282
>gi|284123878|ref|ZP_06386955.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
gi|283829235|gb|EFC33646.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
Length = 237
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G ++G Y SAI +D+ + +P RG A+ + AISD+ EAI+
Sbjct: 18 VDKGNTLYDQGDYKSAILAYDKAINLNPNLAITYFKRGNAKYSIEQYPEAISDYDEAIRL 77
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
E + RG A+ +G+ EAI D ++A+ PN++ + RGI AA+
Sbjct: 78 GIDKAEVYNNRGYAKDEIGQYFEAISDYTEAIRLNPNNSVAYNNRGIAKVNLGHPEAAIS 137
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD N +AY G A IG+Y +A + +AI+L+ + A+ +L
Sbjct: 138 DYDEAIRLDPNNANAYNNRGYAKDEIGQYFEAISDYTEAIRLNPKYANAYNCRGIAKVNL 197
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+SE A+ + + ++ +K Y+ RG+ LG
Sbjct: 198 GHSEAAISDFDEAIRLNPNEAKVYNNRGIANRKLG 232
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ AI KA+ PN A +RG + + + A+ D ++L + Y
Sbjct: 28 GDYKSAILAYDKAINLNPNLAITYFKRGNAKYSIEQYPEAISDYDEAIRLGIDKAEVYNN 87
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
G A IG+Y +A + +AI+L+ N A+ + +L + E A+ + + +D
Sbjct: 88 RGYAKDEIGQYFEAISDYTEAIRLNPNNSVAYNNRGIAKVNLGHPEAAISDYDEAIRLDP 147
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ AY+ RG +GQ+ +AI D + + ++P
Sbjct: 148 NNANAYNNRGYAKDEIGQYFEAISDYTEAIRLNP 181
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G+Y AIS + + ++ +P Y A RG A+ EAAISDF EAI+ N
Sbjct: 155 NRGYAKDEIGQYFEAISDYTEAIRLNPKYANAYNCRGIAKVNLGHSEAAISDFDEAIRLN 214
Query: 446 PSAGEAWKRRGQARAALGESVEA 468
P+ + + RG A LG + +A
Sbjct: 215 PNEAKVYNNRGIANRKLGLTADA 237
>gi|186684702|ref|YP_001867898.1| serine/threonin protein kinase [Nostoc punctiforme PCC 73102]
gi|186467154|gb|ACC82955.1| serine/threonine protein kinase with TPR repeats [Nostoc
punctiforme PCC 73102]
Length = 687
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 127/285 (44%), Gaps = 34/285 (11%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + + G Y A+ F+ +++ DP A RG + E A +D ++AI NP
Sbjct: 317 GLDKYDAGNYEGAVKDFNHVIELDPKNALAYNKRGDTYYRLGDYEQAQADSSQAILLNPQ 376
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
G A+ RG A + LG+ EAI D ++A++ + A + RG+ + KD A+ D S
Sbjct: 377 DGNAYFDRGFAFSELGKYKEAIADYTQAIKLNSDDAYAYYGRGLARVQLKDNKGAIGDFS 436
Query: 508 ACVKLDKENKSAY--------------------------------TYLGLALS-SIGEYK 534
+ L + AY Y AL+ SI + K
Sbjct: 437 KAIALKPQYTEAYLQRGIIRRRLRLKQGAIEDFDTVIKINPSDAKAYYQRALTQSINKQK 496
Query: 535 KAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
A + + AI ++ ++EA+ + + DL N +A E +L ID +F AY RG+
Sbjct: 497 YAALKDYTDAININPKYIEAYLNRGDVFSDLGNKIEATEDYNTILQIDPKFIAAYIHRGI 556
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
G +K AI+D S L +DP+NI R + Y +G + A
Sbjct: 557 HRFSFGDYKGAIEDYSEALKLDPNNIAAYNNRGNAYLELGNKKSA 601
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
AI FD ++K +P +A R ++ ++ AA+ D+T+AI NP EA+ RG
Sbjct: 464 GAIEDFDTVIKINPSDAKAYYQRALTQSINKQKYAALKDYTDAININPKYIEAYLNRGDV 523
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+ LG +EA +D + L+ +P RGI F F D+ A+ED S +KLD N +
Sbjct: 524 FSDLGNKIEATEDYNTILQIDPKFIAAYIHRGIHRFSFGDYKGAIEDYSEALKLDPNNIA 583
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
AY G A +G K A + + +AI ++ N
Sbjct: 584 AYNNRGNAYLELGNKKSANQDYSQAIAINAN 614
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 111/242 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG A GKY AI+ + Q +K + A GRG AR ++ + AI DF++AI
Sbjct: 382 FDRGFAFSELGKYKEAIADYTQAIKLNSDDAYAYYGRGLARVQLKDNKGAIGDFSKAIAL 441
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EA+ +RG R L AI+D ++ P+ A ++R + K AA++
Sbjct: 442 KPQYTEAYLQRGIIRRRLRLKQGAIEDFDTVIKINPSDAKAYYQRALTQSINKQKYAALK 501
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + ++ + AY G S +G +A E + +Q+D F+ A+ H
Sbjct: 502 DYTDAININPKYIEAYLNRGDVFSDLGNKIEATEDYNTILQIDPKFIAAYIHRGIHRFSF 561
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ + A+E + L +D AY+ RG LG K A +D S + I+ +N Y
Sbjct: 562 GDYKGAIEDYSEALKLDPNNIAAYNNRGNAYLELGNKKSANQDYSQAIAINANNALAYYN 621
Query: 625 RA 626
R
Sbjct: 622 RG 623
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASA 400
+L A ++ F + + K K D+ RG+A+V A
Sbjct: 372 LLNPQDGNAYFDRGFAFSELGKYKEAIADYTQAIKLNSDDAYAYYGRGLARVQLKDNKGA 431
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I F + + P Y EA + RG R R + AI DF I+ NPS +A+ +R ++
Sbjct: 432 IGDFSKAIALKPQYTEAYLQRGIIRRRLRLKQGAIEDFDTVIKINPSDAKAYYQRALTQS 491
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN---AAVEDLSACVKLDKENK 517
+ A++D + A+ P + RG V F D A ED + +++D +
Sbjct: 492 INKQKYAALKDYTDAININPKYIEAYLNRGDV---FSDLGNKIEATEDYNTILQIDPKFI 548
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
+AY + G+ S G+YK A E + +A++LD N + A+ + Y +L N + A + Q
Sbjct: 549 AAYIHRGIHRFSFGDYKGAIEDYSEALKLDPNNIAAYNNRGNAYLELGNKKSANQDYSQA 608
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ I+ + AY+ RG++ + AI D
Sbjct: 609 IAINANNALAYYNRGVIRTKQKNKQGAIADF 639
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
++ L+RG + G A ++ IL+ DP + A I RG R + + AI D++E
Sbjct: 514 IEAYLNRGDVFSDLGNKIEATEDYNTILQIDPKFIAAYIHRGIHRFSFGDYKGAIEDYSE 573
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A++ +P+ A+ RG A LG A QD S+A+ N+A + RG++ K K+
Sbjct: 574 ALKLDPNNIAAYNNRGNAYLELGNKKSANQDYSQAIAINANNALAYYNRGVIRTKQKNKQ 633
Query: 501 AAVEDLSACVKL 512
A+ D KL
Sbjct: 634 GAIADFKKAAKL 645
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L++ G+ + ++ AV+D + ++LD +N AY G +G+Y++A+ +AI
Sbjct: 313 LYQEGLDKYDAGNYEGAVKDFNHVIELDPKNALAYNKRGDTYYRLGDYEQAQADSSQAIL 372
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L+ A+ + +L ++A+ Q + ++ + AY+ RGL L +K AI
Sbjct: 373 LNPQDGNAYFDRGFAFSELGKYKEAIADYTQAIKLNSDDAYAYYGRGLARVQLKDNKGAI 432
Query: 606 KDLSSGLGIDPSNIECLYLR 625
D S + + P E YL+
Sbjct: 433 GDFSKAIALKPQYTEA-YLQ 451
>gi|427730743|ref|YP_007076980.1| Flp pilus assembly protein TadD [Nostoc sp. PCC 7524]
gi|427366662|gb|AFY49383.1| Flp pilus assembly protein TadD [Nostoc sp. PCC 7524]
Length = 521
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 116/235 (49%), Gaps = 2/235 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
++ +AIS +DQ LK P EA RG A R R E AIS + ++++ NP +AW
Sbjct: 239 EFEAAISSYDQALKFKPDKHEAWYNRGIALRNLGRN-EEAISSYDQSVKFNPDDHQAWNN 297
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG LG + EAI +A++ +P+ + + RGI A+ +K
Sbjct: 298 RGNTLFNLGRNEEAISSYDQAVKIKPDKHETWNNRGIALRNLGRNEEAISSYDQALKFQP 357
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G+AL ++G ++A ++ +A++ +F EAW + ++L +E+A+
Sbjct: 358 DLHQAWNNRGIALFNLGRNEEAISSYDQALKFQPDFHEAWYNRGNALRNLGRNEEAISSY 417
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
Q L F +A++ RG+ L L ++++AI L P + Y +A CY
Sbjct: 418 DQALKFQPDFHEAWNNRGVALFNLERNEEAISSYDQALKFQPDLHQAWYNKACCY 472
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+E EAAIS + +A++ P EAW RG A LG + EAI ++++F P+ +
Sbjct: 238 KEFEAAISSYDQALKFKPDKHEAWYNRGIALRNLGRNEEAISSYDQSVKFNPDDHQAWNN 297
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG F A+ VK+ + + G+AL ++G ++A ++ +A++
Sbjct: 298 RGNTLFNLGRNEEAISSYDQAVKIKPDKHETWNNRGIALRNLGRNEEAISSYDQALKFQP 357
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ +AW + +L +E+A+ Q L F +A++ RG L LG++++AI
Sbjct: 358 DLHQAWNNRGIALFNLGRNEEAISSYDQALKFQPDFHEAWYNRGNALRNLGRNEEAISSY 417
Query: 609 SSGLGIDP 616
L P
Sbjct: 418 DQALKFQP 425
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 84/191 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AIS +DQ LK P +A RG A E AIS + +A++
Sbjct: 331 NRGIALRNLGRNEEAISSYDQALKFQPDLHQAWNNRGIALFNLGRNEEAISSYDQALKFQ 390
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG + EAI +AL+F+P+ + + RG+ F + A+
Sbjct: 391 PDFHEAWYNRGNALRNLGRNEEAISSYDQALKFQPDFHEAWNNRGVALFNLERNEEAISS 450
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + A+ + +KA E AI L+ W + +
Sbjct: 451 YDQALKFQPDLHQAWYNKACCYALQNNVEKAIENLQIAINLNPEQCRTWAKTDSDFDSIR 510
Query: 566 NSEKALECLQQ 576
N E E +++
Sbjct: 511 NDELFQELMEK 521
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 82/177 (46%), Gaps = 1/177 (0%)
Query: 464 ESVEAIQDL-SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
E V QDL ++ + E +L E G + + K+F AA+ +K + A+
Sbjct: 204 EKVLEFQDLLAEQHQTEDRKVGLLFELGNLLYAAKEFEAAISSYDQALKFKPDKHEAWYN 263
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
G+AL ++G ++A ++ ++++ + + +AW + +L +E+A+ Q + I
Sbjct: 264 RGIALRNLGRNEEAISSYDQSVKFNPDDHQAWNNRGNTLFNLGRNEEAISSYDQAVKIKP 323
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++ RG+ L LG++++AI L P + R +G EA+
Sbjct: 324 DKHETWNNRGIALRNLGRNEEAISSYDQALKFQPDLHQAWNNRGIALFNLGRNEEAI 380
>gi|428210636|ref|YP_007083780.1| serine/threonine protein kinase [Oscillatoria acuminata PCC 6304]
gi|427999017|gb|AFY79860.1| serine/threonine protein kinase [Oscillatoria acuminata PCC 6304]
Length = 702
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 122/241 (50%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+A+ +D+ ++ +P Y +A I RG + + AI+ F +AI+ P + EAW +G
Sbjct: 386 AAMDAYDRAIQLNPEYLDAWIRRGDVLNRLQRYDGAIASFEKAIELVPESAEAWNGKGNT 445
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+L EAI +ALEF+P S++ + RG + KD+ AA++ V+ +
Sbjct: 446 LLSLQRYEEAIAAYDQALEFQPESSEAWYARGWAFHQLKDYEAALKSYDKSVEYQFDYAV 505
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
+ G L + + K+A E++ KA++ N+ EAW L ++ +A + ++ +
Sbjct: 506 GWYNRGNVLMQLNQAKEAVESYDKAVRFQPNYAEAWYSRGNALMQLNDASEAAKSYERAV 565
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ + +A++ G LH L ++++AI+ + + + + Y R + + + Y+EA
Sbjct: 566 KLQTNYQEAWYSLGWALHQLRRYEQAIEAYNQAIDLKKIDYRAWYNRGNALYNLNRYQEA 625
Query: 639 V 639
V
Sbjct: 626 V 626
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 121/245 (49%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ F++ ++ P EA G+G + E AI+ + +A++ P + EAW R
Sbjct: 417 RYDGAIASFEKAIELVPESAEAWNGKGNTLLSLQRYEEAIAAYDQALEFQPESSEAWYAR 476
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L + A++ K++E++ + A + RG V + AVE V+
Sbjct: 477 GWAFHQLKDYEAALKSYDKSVEYQFDYAVGWYNRGNVLMQLNQAKEAVESYDKAVRFQPN 536
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G AL + + +A +++ +A++L N+ EAW L L E+A+E
Sbjct: 537 YAEAWYSRGNALMQLNDASEAAKSYERAVKLQTNYQEAWYSLGWALHQLRRYEQAIEAYN 596
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
Q + + K +A++ RG L+ L ++++A+ + + P + E Y + + +G+Y
Sbjct: 597 QAIDLKKIDYRAWYNRGNALYNLNRYQEAVSSYNEAAYVKPDHAESWYGKGNSLSTLGQY 656
Query: 636 REAVI 640
EA++
Sbjct: 657 EEAIL 661
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +DQ L+ P EA RG A ++ EAA+ + ++++ W R
Sbjct: 451 RYEEAIAAYDQALEFQPESSEAWYARGWAFHQLKDYEAALKSYDKSVEYQFDYAVGWYNR 510
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L ++ EA++ KA+ F+PN A+ + RG + D + A + VKL
Sbjct: 511 GNVLMQLNQAKEAVESYDKAVRFQPNYAEAWYSRGNALMQLNDASEAAKSYERAVKLQTN 570
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ LG AL + Y++A EA+ +AI L + AW + +L ++A+
Sbjct: 571 YQEAWYSLGWALHQLRRYEQAIEAYNQAIDLKKIDYRAWYNRGNALYNLNRYQEAVSSYN 630
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ Y+ +++++ +G L LGQ+++AI L P+
Sbjct: 631 EAAYVKPDHAESWYGKGNSLSTLGQYEEAILAYDRALRYQPN 672
>gi|302838049|ref|XP_002950583.1| hypothetical protein VOLCADRAFT_91119 [Volvox carteri f. nagariensis]
gi|300264132|gb|EFJ48329.1| hypothetical protein VOLCADRAFT_91119 [Volvox carteri f. nagariensis]
Length = 1402
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 131/287 (45%), Gaps = 36/287 (12%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR------------ELEAA 434
R A +GK A+ + + L+ D + + L RG + R ELEAA
Sbjct: 856 RAFALRQQGKLVEAVREYTRALELDSNHFKTLFNRGFT--YDRGHGWLSRLPPLGELEAA 913
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ D+T A+Q +P + A RG R L + A+ D + A+ EPNSAD H RG
Sbjct: 914 VEDYTAALQVDPQSSYAHYNRGITRDRLQDFAGAVADFTAAICLEPNSADFYHNRGFALR 973
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K F AAV+D + +KL+ + AY + ++A + + KA++++ N A
Sbjct: 974 KQGMFEAAVQDYTMAIKLNPNHCRAYYNRAFCHDRLNHVQQAIDDYTKALEMEPNNATAL 1033
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA---------- 604
+ ++ S+ AL+ + + D +++Y+ RG+LL LG+ ++A
Sbjct: 1034 LNRGSLHERNGRSDMALQDFDRAIMGDPNCAQSYNARGVLLQHLGRLEEAQSDLDMAVVL 1093
Query: 605 ------------IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+DL+ + +DP ++ RA C+ +GEY A+
Sbjct: 1094 MQPPSALLFRNRAQDLTRAISLDPGDLLSYSRRAHCFRRMGEYESAI 1140
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 12/254 (4%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI + +A A++ F + +P + RG A Q EAA+ D+T AI+ NP
Sbjct: 934 RGITRDRLQDFAGAVADFTAAICLEPNSADFYHNRGFALRKQGMFEAAVQDYTMAIKLNP 993
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ R L +AI D +KALE EPN+A L RG ++ + + A++D
Sbjct: 994 NHCRAYYNRAFCHDRLNHVQQAIDDYTKALEMEPNNATALLNRGSLHERNGRSDMALQDF 1053
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ D +Y G+ L +G ++A+ LD + L Q L
Sbjct: 1054 DRAIMGDPNCAQSYNARGVLLQHLGRLEEAQS------DLDMAVV-----LMQPPSALLF 1102
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A + L + + +D +Y R +G+++ AI+D + + + P+N + +RA
Sbjct: 1103 RNRAQD-LTRAISLDPGDLLSYSRRAHCFRRMGEYESAIRDYTRAITLSPNNPKLHTIRA 1161
Query: 627 SCYHAIGEYREAVI 640
CY I Y EAV+
Sbjct: 1162 YCYAMIEWYNEAVM 1175
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L G R R+ I++ TE + SNP A + R Q+ LGE A+ D + L
Sbjct: 53 LPGGNGRRTITRDYHRLINECTEKLLSNPKHTLAMRLRAQSYRMLGEDDAALADYNSLLA 112
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
EP + D L RG + + + + A++ +A ++ + ++ A + S+ G + +A
Sbjct: 113 LEPTNVDALFYRGTILERQQHIDEAIQCYTAVLQQEPQHHKALYNRAVCFSAKGSFSQAI 172
Query: 538 EAHLKAIQLDR 548
E AI+LD+
Sbjct: 173 EDFSAAIELDQ 183
>gi|355726727|gb|AES08962.1| tetratricopeptide repeat domain 13 [Mustela putorius furo]
Length = 636
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 101/180 (56%), Gaps = 1/180 (0%)
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K A
Sbjct: 3 SPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIA 61
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+ L
Sbjct: 62 MLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALL 121
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+++ + LRG++L+ G ++A+K+ L ++P N C Y++ + A+G++ E +
Sbjct: 122 LNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGI 181
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)
Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V ++K+ + RL RG YA+A F Q L+ + P A++ +G
Sbjct: 11 AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 70
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ L+ AI F EA++ +A+K GQA LG A + KAL N L
Sbjct: 71 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 130
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG++ + A+++ C++L+ N+ GL+ ++G++ + +A K +
Sbjct: 131 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 188
>gi|145545470|ref|XP_001458419.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426239|emb|CAK91022.1| unnamed protein product [Paramecium tetraurelia]
Length = 551
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 134/276 (48%), Gaps = 4/276 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
N + VT +K + + ++++N KY AI +D+ + +P Y +G A
Sbjct: 121 NPNYDVTWFNKGNQLLEQHYIGISLSKIN--KYYEAIECYDKAIFINPNYDLTWYLKGHA 178
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ AI +AI NP+ +AW +G A +L + EAI+ KA++ PN+
Sbjct: 179 LNKLNRYQEAIECSDKAISINPNYDDAWNNKGNALKSLNKYQEAIECYDKAIKINPNNFG 238
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ + +GI A+E + + ++ A+ G AL+ + +Y++A E + KAI
Sbjct: 239 VWNNKGIALDNLNQHQEAMECYNKAISINPNYDVAWNNKGNALNHLHKYQEAVECYYKAI 298
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++ N+ AW ++ L + A+EC ++ + I+ + + GL L L ++++A
Sbjct: 299 FINPNYDVAWNNIGDGLSKLNKYKDAIECYKKAISINPNYDVTWFHNGLALSNLNKYQEA 358
Query: 605 IKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAV 639
I+ + I+P N E ++ + + + +Y+EA+
Sbjct: 359 IECYDKAISINP-NYEAAWINKGHALNKLNQYQEAI 393
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 122/255 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA N ++ A+ +++ + +P Y A +G A + + A+ + +AI N
Sbjct: 242 NKGIALDNLNQHQEAMECYNKAISINPNYDVAWNNKGNALNHLHKYQEAVECYYKAIFIN 301
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW G + L + +AI+ KA+ PN G+ + A+E
Sbjct: 302 PNYDVAWNNIGDGLSKLNKYKDAIECYKKAISINPNYDVTWFHNGLALSNLNKYQEAIEC 361
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++ ++A+ G AL+ + +Y++A E + KAI ++ N+ AW + L
Sbjct: 362 YDKAISINPNYEAAWINKGHALNKLNQYQEAIECYDKAISINSNYEAAWNNKGLALTKLN 421
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+EC +V+ I++ A++ +G L L Q++ AI+ + I+ + +
Sbjct: 422 KYQEAIECYDKVISINQNSDAAWNNKGFALSNLYQYQDAIECYDKAISINSKHDTAWQNK 481
Query: 626 ASCYHAIGEYREAVI 640
H + +Y++A+I
Sbjct: 482 GLILHNLNKYKDAII 496
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 120/256 (46%), Gaps = 12/256 (4%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
KY AI +D+ + +P Y A I +G A + + AI + +AI NP+ W
Sbjct: 37 NKYQEAIECYDKAISINPNYEAAWINKGLALNKLNQYQEAIECYNKAISINPNYDVTWYL 96
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADIL-----------HERGIVNFKFKDFNAAV 503
+G A + L + +AI+ K++ PN D+ H GI K + A+
Sbjct: 97 KGHALSKLNQYQKAIECYDKSISINPNY-DVTWFNKGNQLLEQHYIGISLSKINKYYEAI 155
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
E + ++ + G AL+ + Y++A E KAI ++ N+ +AW + +
Sbjct: 156 ECYDKAIFINPNYDLTWYLKGHALNKLNRYQEAIECSDKAISINPNYDDAWNNKGNALKS 215
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L ++A+EC + + I+ ++ +G+ L L QH++A++ + + I+P+
Sbjct: 216 LNKYQEAIECYDKAIKINPNNFGVWNNKGIALDNLNQHQEAMECYNKAISINPNYDVAWN 275
Query: 624 LRASCYHAIGEYREAV 639
+ + + + +Y+EAV
Sbjct: 276 NKGNALNHLHKYQEAV 291
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 130/270 (48%), Gaps = 8/270 (2%)
Query: 374 SKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+ SI+ ++ ++ +G A + KY A+ + + + +P Y A G + +
Sbjct: 261 NKAISINPNYDVAWNNKGNALNHLHKYQEAVECYYKAIFINPNYDVAWNNIGDGLSKLNK 320
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI + +AI NP+ W G A + L + EAI+ KA+ PN +G
Sbjct: 321 YKDAIECYKKAISINPNYDVTWFHNGLALSNLNKYQEAIECYDKAISINPNYEAAWINKG 380
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K + A+E + ++ ++A+ GLAL+ + +Y++A E + K I +++N
Sbjct: 381 HALNKLNQYQEAIECYDKAISINSNYEAAWNNKGLALTKLNKYQEAIECYDKVISINQNS 440
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI--KDL 608
AW + +L + A+EC + + I+ + A+ +GL+LH L ++K AI D
Sbjct: 441 DAAWNNKGFALSNLYQYQDAIECYDKAISINSKHDTAWQNKGLILHNLNKYKDAIICYDQ 500
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ + I P ++ L+A +G +EA
Sbjct: 501 ALSISITPKSLR---LKADSLIKLGNEQEA 527
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 4/249 (1%)
Query: 375 KSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+ I+ ++ L+ +G A +Y AI D+ + +P Y +A +G A +
Sbjct: 160 KAIFINPNYDLTWYLKGHALNKLNRYQEAIECSDKAISINPNYDDAWNNKGNALKSLNKY 219
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI + +AI+ NP+ W +G A L + EA++ +KA+ PN + +G
Sbjct: 220 QEAIECYDKAIKINPNNFGVWNNKGIALDNLNQHQEAMECYNKAISINPNYDVAWNNKGN 279
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ AVE + ++ A+ +G LS + +YK A E + KAI ++ N+
Sbjct: 280 ALNHLHKYQEAVECYYKAIFINPNYDVAWNNIGDGLSKLNKYKDAIECYKKAISINPNYD 339
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
W H +L ++A+EC + + I+ + A+ +G L+ L Q+++AI+
Sbjct: 340 VTWFHNGLALSNLNKYQEAIECYDKAISINPNYEAAWINKGHALNKLNQYQEAIECYDKA 399
Query: 612 LGIDPSNIE 620
+ I+ SN E
Sbjct: 400 ISIN-SNYE 407
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 122/256 (47%), Gaps = 13/256 (5%)
Query: 375 KSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+ SI+ ++ +++G+A +Y AI +++ + +P Y +G A + +
Sbjct: 48 KAISINPNYEAAWINKGLALNKLNQYQEAIECYNKAISINPNYDVTWYLKGHALSKLNQY 107
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQ----------ARAALGESVEAIQDLSKALEFEPN 481
+ AI + ++I NP+ W +G + + + + EAI+ KA+ PN
Sbjct: 108 QKAIECYDKSISINPNYDVTWFNKGNQLLEQHYIGISLSKINKYYEAIECYDKAIFINPN 167
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ +G K + A+E + ++ A+ G AL S+ +Y++A E +
Sbjct: 168 YDLTWYLKGHALNKLNRYQEAIECSDKAISINPNYDDAWNNKGNALKSLNKYQEAIECYD 227
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+++ N W + +L ++A+EC + + I+ + A++ +G L+ L ++
Sbjct: 228 KAIKINPNNFGVWNNKGIALDNLNQHQEAMECYNKAISINPNYDVAWNNKGNALNHLHKY 287
Query: 602 KKAIKDLSSGLGIDPS 617
++A++ + I+P+
Sbjct: 288 QEAVECYYKAIFINPN 303
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%)
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y Y+G AL S+ +Y++A E + KAI ++ N+ AW + L ++A+EC + +
Sbjct: 26 YYYIGNALKSLNKYQEAIECYDKAISINPNYEAAWINKGLALNKLNQYQEAIECYNKAIS 85
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
I+ + ++L+G L L Q++KAI+ + I+P+
Sbjct: 86 INPNYDVTWYLKGHALSKLNQYQKAIECYDKSISINPN 123
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 92/477 (19%), Positives = 198/477 (41%), Gaps = 55/477 (11%)
Query: 46 LCSLRNWSKAIRILDSLLA--QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLL 103
L SL + +AI D ++ +YE I N+ ++L ++ I +KA+ ++P
Sbjct: 33 LKSLNKYQEAIECYDKAISINPNYEAAWI-NKGLALNKLNQYQEAIECYNKAISINPNYD 91
Query: 104 QAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEY 163
+ LKG A S L + ++A+ ++K +++ + D+ F + +LL ++
Sbjct: 92 VTWYLKGHALSKLNQYQKAIECYDKSI--SINPNYDVTWFNKGNQLLE----------QH 139
Query: 164 DVSNSMSSLTVSESGLNANDKMSETSENHN-----KSDICDSSSQSRDVSETCSKS-SHD 217
+ S+S + + DK + N++ K + ++ ++ E K+ S +
Sbjct: 140 YIGISLSKINKYYEAIECYDKAIFINPNYDLTWYLKGHALNKLNRYQEAIECSDKAISIN 199
Query: 218 PDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGS----KSTHASRDASEI 273
P+ + +++ S+ + + K +++ N+ G + + + ++A E
Sbjct: 200 PNYDDAWNNKGNALKSLNKYQEAIECYDKAIKINPNNFGVWNNKGIALDNLNQHQEAMEC 259
Query: 274 NRQS---SDDFDICNGPIDKASVNERHGRQ-----------TNGTHDV-HDKLSSDSASL 318
++ + ++D+ A +N H Q N +DV + + + L
Sbjct: 260 YNKAISINPNYDVAWNNKGNA-LNHLHKYQEAVECYYKAIFINPNYDVAWNNIGDGLSKL 318
Query: 319 NDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKS 378
N E Y K+ IS N + D T + L+ SN K + + K+ S
Sbjct: 319 NKYKDAIECYKKA-ISINPNYDVTWFHNGLAL--------SNLNKYQE--AIECYDKAIS 367
Query: 379 ISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
I+ ++ +++G A +Y AI +D+ + + Y A +G A + + AI
Sbjct: 368 INPNYEAAWINKGHALNKLNQYQEAIECYDKAISINSNYEAAWNNKGLALTKLNKYQEAI 427
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
+ + I N ++ AW +G A + L + +AI+ KA+ +G++
Sbjct: 428 ECYDKVISINQNSDAAWNNKGFALSNLYQYQDAIECYDKAISINSKHDTAWQNKGLI 484
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 51/96 (53%)
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
++L R + ++ + L ++A+EC + + I+ + A+ +GL L+ L Q+++
Sbjct: 16 LELKRQLTIRYYYIGNALKSLNKYQEAIECYDKAISINPNYEAAWINKGLALNKLNQYQE 75
Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AI+ + + I+P+ YL+ + +Y++A+
Sbjct: 76 AIECYNKAISINPNYDVTWYLKGHALSKLNQYQKAI 111
>gi|428317844|ref|YP_007115726.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
nigro-viridis PCC 7112]
gi|428241524|gb|AFZ07310.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
nigro-viridis PCC 7112]
Length = 710
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ FD LK P Y A GRG + E AI+ + +A+Q P+ AW RGQA
Sbjct: 433 AIASFDNALKIQPDYAAAWEGRGDVLLDSQRYEEAIASYEKAVQFQPNLYGAWYNRGQAH 492
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L + A++ KA+E + ++ + + G V + A E V+
Sbjct: 493 QKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLELNKNQEAFEAYEKAVRFQPNFYQG 552
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G+AL + +++A EA+ KA++L ++ +AW +L Y +L E+A+EC + L
Sbjct: 553 WYSKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALD 612
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ + +A++ RG L +++ A+ + + + P E Y R + A+ Y +A+
Sbjct: 613 LNPKEYQAWYNRGNAQSNLKRYEDALVSYNEAVYVKPDYSEAWYSRGNALVAVKRYEDAI 672
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 118/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N ++ A++ +++ + P Y E + ++ + + + + AI+
Sbjct: 351 NRGNTLYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLYKLKKYQESQAAYDRAIELK 410
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A L +S EAI AL+ +P+ A RG V + + A+
Sbjct: 411 PEYLEAWTGRGYALEKLQQSQEAIASFDNALKIQPDYAAAWEGRGDVLLDSQRYEEAIAS 470
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+ A+ G A + +Y +A E++ KA+++ + EAW +L + +L
Sbjct: 471 YEKAVQFQPNLYGAWYNRGQAHQKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLELN 530
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+++A E ++ + F + ++ +G+ L + +H++A++ + + P + Y
Sbjct: 531 KNQEAFEAYEKAVRFQPNFYQGWYSKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNL 590
Query: 626 ASCYHAIGEYREAV 639
YH + +Y +A+
Sbjct: 591 GWSYHELRKYEQAI 604
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 64/134 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GIA + ++ A+ +++ +K P Y +A G + R+ E AI + A+ N
Sbjct: 555 SKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALDLN 614
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A++ L +A+ ++A+ +P+ ++ + RG K + A+
Sbjct: 615 PKEYQAWYNRGNAQSNLKRYEDALVSYNEAVYVKPDYSEAWYSRGNALVAVKRYEDAIAS 674
Query: 506 LSACVKLDKENKSA 519
++ + +A
Sbjct: 675 YDKAIRYKPDYGAA 688
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 1/159 (0%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+ D L+ RG + F A+ + L + + L + +Y++++ A+
Sbjct: 345 NATD-LYNRGNTLYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLYKLKKYQESQAAY 403
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI+L +LEAW + L S++A+ L I ++ A+ RG +L +
Sbjct: 404 DRAIELKPEYLEAWTGRGYALEKLQQSQEAIASFDNALKIQPDYAAAWEGRGDVLLDSQR 463
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+++AI + P+ Y R + + +Y AV
Sbjct: 464 YEEAIASYEKAVQFQPNLYGAWYNRGQAHQKLKQYDRAV 502
>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
Length = 1711
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 6/265 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D SR +A + YA A+ F ++ + DP +A + +G A + E A++ +
Sbjct: 235 DIWYSRALALLKLQNYAEAVQSFARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKL 294
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P EA K RG A LG EA+ L K+LE EP + ++ ++G++
Sbjct: 295 LEYDPDFTEAQKLRGTVLAGLGRFEEALGPLEKSLEKEPENYNLWLQKGLILLDTGKLEP 354
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++ +L+ +N++ + +G AL S+ Y++A EA + ++L+ W
Sbjct: 355 AIDAFENAARLNPDNETCWMNMGFALYSLERYEEALEAFKEGLRLNPYLETGWNRKGIVL 414
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
L + +ALE ++ + + F A+ RGLLL + +KA + + L I+P +I+
Sbjct: 415 GKLGKTGEALEAFEEAIKLRPDFEDAWKNRGLLLFASEECEKAEEAFAEVLKINPEDIDS 474
Query: 622 LYLRASCYHAIG------EYREAVI 640
LY R +G EY E V+
Sbjct: 475 LYNRGISLLKLGRKETALEYLEKVV 499
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI +Y A IF ++LK DP EA +G A L AI F EAI+ +P
Sbjct: 138 KGILLSELSRYEEAEKIFSKVLKLDPENREAWFRKGFALVQLLRLNEAIKAFEEAIKIDP 197
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S EAW R A L EA++ L P+ DI + R + K +++ AV+
Sbjct: 198 SYFEAWNCRCFALMKLEVYEEALEAFDSMLRIYPDVKDIWYSRALALLKLQNYAEAVQSF 257
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +LD ENK A+ GL L+ G++++A A K ++ D +F EA L
Sbjct: 258 ARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKLLEYDPDFTEAQKLRGTVLAGLGR 317
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+AL L++ L + + +GL+L G+ + AI + ++P N C
Sbjct: 318 FEEALGPLEKSLEKEPENYNLWLQKGLILLDTGKLEPAIDAFENAARLNPDNETCWMNMG 377
Query: 627 SCYHAIGEYREAV 639
+++ Y EA+
Sbjct: 378 FALYSLERYEEAL 390
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 115/245 (46%), Gaps = 15/245 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPM-----YPEALIGRGTARAFQRELEAAISDFTEAI 442
G++Q+ GKY A F+++L+++PM Y L+ RG + E A+ F A+
Sbjct: 1288 GLSQLKTGKYEDACDTFEKVLEKNPMAADIWYLSGLVMRGLDQN-----EDAVEAFNRAL 1342
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P A +++G A +L EA S LE P +AD+L+ R + +FK +F A
Sbjct: 1343 EIKPDLRAAQEQKGLALLSLCRYEEARDAFSSVLEESPENADVLYNRAVASFKTLNFEDA 1402
Query: 503 VEDLSACVKLDKENKSAYT----YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+DL V L + YT LG+A + +Y++A +A ++ + EA ++
Sbjct: 1403 AKDLEK-VLLFAPDSPDYTEACYMLGIASIELQDYERALQALDMVLEWEPEHEEALYNMA 1461
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+L E+A +Q+L ++ + GL L L K+A+K +P N
Sbjct: 1462 LVLFNLEEYEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALKAFEKAALFNPKN 1521
Query: 619 IECLY 623
E LY
Sbjct: 1522 EEALY 1526
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +RGI+ + G+ +A+ ++++ P YP+ G A E E A+ F +
Sbjct: 472 IDSLYNRGISLLKLGRKETALEYLEKVVSLRPDYPDLSYSLGVALTELGEYEKALETFEK 531
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
NP E RRG+ +G A+Q + L +P S + + +G+ K ++F
Sbjct: 532 LASENPYDLEIQCRRGKLAMEVGNYETALQAFERILTEKPASREAWYRKGLALLKLENFE 591
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AV+ A D + + A G A + E A E + ++ + AW +
Sbjct: 592 EAVKAFDAVATKDADYEDAGVLKGFAQMKLKECASALETFERVLEKKPDSDTAWYYRGMI 651
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
L E+A + + ++ A+ R L GQ++ A + + L DP N+
Sbjct: 652 LYTLQRQEEAAKAFESASRLNPGLYTAFEYRAKCLFETGQYEAAFEAFEAVLEKDPENLS 711
Query: 621 CLYLRASCYHAIGEYREAV 639
L RA C + + +EAV
Sbjct: 712 ALEKRAICLFELKKNKEAV 730
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 34/267 (12%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPM-------------------------------Y 414
++G+ KY SA+ FD + +E+P Y
Sbjct: 69 AKGLVLAKLEKYDSALECFDSLTRENPRNENALEQKCLLLAKIGKKDLALEALEDFLKKY 128
Query: 415 P---EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P AL +G + E A F++ ++ +P EAW R+G A L EAI+
Sbjct: 129 PANEAALYHKGILLSELSRYEEAEKIFSKVLKLDPENREAWFRKGFALVQLLRLNEAIKA 188
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+A++ +P+ + + R K + + A+E + +++ + K + LAL +
Sbjct: 189 FEEAIKIDPSYFEAWNCRCFALMKLEVYEEALEAFDSMLRIYPDVKDIWYSRALALLKLQ 248
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
Y +A ++ + +LD +AW E+AL L+++L D F++A LR
Sbjct: 249 NYAEAVQSFARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKLLEYDPDFTEAQKLR 308
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSN 618
G +L GLG+ ++A+ L L +P N
Sbjct: 309 GTVLAGLGRFEEALGPLEKSLEKEPEN 335
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 122/278 (43%), Gaps = 34/278 (12%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ F++ L+ +P EA +G A + ++A+ F + NP A +++
Sbjct: 45 RYEEALENFERALEINPKDSEACYAKGLVLAKLEKYDSALECFDSLTRENPRNENALEQK 104
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A +G+ A++ L L+ P + L+ +GI+ + + A + S +KLD E
Sbjct: 105 CLLLAKIGKKDLALEALEDFLKKYPANEAALYHKGILLSELSRYEEAEKIFSKVLKLDPE 164
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-------------------- 555
N+ A+ G AL + +A +A +AI++D ++ EAW
Sbjct: 165 NREAWFRKGFALVQLLRLNEAIKAFEEAIKIDPSYFEAWNCRCFALMKLEVYEEALEAFD 224
Query: 556 HLTQFYQD--------------LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+ + Y D L N +A++ +V +D A+ +GLLL G+H
Sbjct: 225 SMLRIYPDVKDIWYSRALALLKLQNYAEAVQSFARVTELDPENKDAWLQQGLLLARTGKH 284
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++A+ L L DP E LR + +G + EA+
Sbjct: 285 EEALNALEKLLEYDPDFTEAQKLRGTVLAGLGRFEEAL 322
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 120/280 (42%), Gaps = 29/280 (10%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE---------DPMYPEA-LIGRGTARAFQRELEA 433
+L GI G+Y +A+ +F+ I ++ DP P + L +G Q E
Sbjct: 754 KLRLGIEYFELGQYENALELFEGINEKAEGIYEKTRDPQKPNSVLYWKGLVFIRQEAYEK 813
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA-----DILHE 488
A+ F +P+ E W G + + LG EA + KALE NSA DI ++
Sbjct: 814 AVEAFKGITDQDPNFAEGWYFTGLSCSKLGRYEEASEAFKKALEI--NSALRDTHDICYQ 871
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL--DKENKSAYTYL------GLALSSIGEYKKAEEAH 540
GI NF+ F A++ K D+E + TY L+L +G YK+AE
Sbjct: 872 LGISNFELGKFEEALKAFEKAFKTTPDREQITETTYTDLIYMKSLSLLRLGRYKEAEVGF 931
Query: 541 LKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ I D + EA HL+ F Q+ + E+ALE ++VL +G+ L L
Sbjct: 932 KEVIFRDSDNAEALAHLSTACFKQE--HYEEALEIFEKVLSQTPERKTVLFRKGVALKAL 989
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
G+ + ++ L + P L R +G Y EA
Sbjct: 990 GKIQDSLDIFDLVLKLKPDCSYALEQRGYALFELGRYGEA 1029
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 115/253 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + ++I F++ L+ P Y A GT E A+ +F A++ NP
Sbjct: 2 RGLAFAEIDRTEASILCFEKALELMPEYAAAWCAMGTVAGKAERYEEALENFERALEINP 61
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA +G A L + A++ P + + L ++ ++ K + A+E L
Sbjct: 62 KDSEACYAKGLVLAKLEKYDSALECFDSLTRENPRNENALEQKCLLLAKIGKKDLALEAL 121
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+K N++A + G+ LS + Y++AE+ K ++LD EAW L
Sbjct: 122 EDFLKKYPANEAALYHKGILLSELSRYEEAEKIFSKVLKLDPENREAWFRKGFALVQLLR 181
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A++ ++ + ID + +A++ R L L +++A++ S L I P + Y RA
Sbjct: 182 LNEAIKAFEEAIKIDPSYFEAWNCRCFALMKLEVYEEALEAFDSMLRIYPDVKDIWYSRA 241
Query: 627 SCYHAIGEYREAV 639
+ Y EAV
Sbjct: 242 LALLKLQNYAEAV 254
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ G A + +Y A+ F + L+ +P +G + A+ F EAI+
Sbjct: 374 MNMGFALYSLERYEEALEAFKEGLRLNPYLETGWNRKGIVLGKLGKTGEALEAFEEAIKL 433
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AWK RG A E +A + ++ L+ P D L+ RGI K A+E
Sbjct: 434 RPDFEDAWKNRGLLLFASEECEKAEEAFAEVLKINPEDIDSLYNRGISLLKLGRKETALE 493
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
L V L + LG+AL+ +GEY+KA E K + LE + ++
Sbjct: 494 YLEKVVSLRPDYPDLSYSLGVALTELGEYEKALETFEKLASENPYDLEIQCRRGKLAMEV 553
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
N E AL+ +++L +A++ +GL L L ++A+K
Sbjct: 554 GNYETALQAFERILTEKPASREAWYRKGLALLKLENFEEAVK 595
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 113/255 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G+ ++ GK AI F+ + +P + G A E A+ F E ++
Sbjct: 340 LQKGLILLDTGKLEPAIDAFENAARLNPDNETCWMNMGFALYSLERYEEALEAFKEGLRL 399
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP W R+G LG++ EA++ +A++ P+ D RG++ F ++ A E
Sbjct: 400 NPYLETGWNRKGIVLGKLGKTGEALEAFEEAIKLRPDFEDAWKNRGLLLFASEECEKAEE 459
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +K++ E+ + G++L +G + A E K + L ++ + L +L
Sbjct: 460 AFAEVLKINPEDIDSLYNRGISLLKLGRKETALEYLEKVVSLRPDYPDLSYSLGVALTEL 519
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
EKALE +++ + + RG L +G ++ A++ L P++ E Y
Sbjct: 520 GEYEKALETFEKLASENPYDLEIQCRRGKLAMEVGNYETALQAFERILTEKPASREAWYR 579
Query: 625 RASCYHAIGEYREAV 639
+ + + EAV
Sbjct: 580 KGLALLKLENFEEAV 594
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 7/265 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D S G+A G+Y A+ F+++ E+P E RG E A+ F
Sbjct: 507 DLSYSLGVALTELGEYEKALETFEKLASENPYDLEIQCRRGKLAMEVGNYETALQAFERI 566
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ P++ EAW R+G A L EA++ + + D +G K K+ +
Sbjct: 567 LTEKPASREAWYRKGLALLKLENFEEAVKAFDAVATKDADYEDAGVLKGFAQMKLKECAS 626
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E ++ ++ +A+ Y G+ L ++ ++A +A A +L+ A+ + +
Sbjct: 627 ALETFERVLEKKPDSDTAWYYRGMILYTLQRQEEAAKAFESASRLNPGLYTAFEYRAKCL 686
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS---- 617
+ E A E + VL D A R + L L ++K+A+ LS+ L DP
Sbjct: 687 FETGQYEAAFEAFEAVLEKDPENLSALEKRAICLFELKKNKEAVDALSTLLESDPERKDT 746
Query: 618 --NIECLYLRASC-YHAIGEYREAV 639
+E LR Y +G+Y A+
Sbjct: 747 KLRLEEAKLRLGIEYFELGQYENAL 771
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 6/261 (2%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V +++ I D R + +G+A ++ +Y A F +L+E P + L R A
Sbjct: 1334 AVEAFNRALEIKPDLRAAQEQKGLALLSLCRYEEARDAFSSVLEESPENADVLYNRAVAS 1393
Query: 426 AFQRELEAAISDFTEAI---QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
E A D + + +P EA G A L + A+Q L LE+EP
Sbjct: 1394 FKTLNFEDAAKDLEKVLLFAPDSPDYTEACYMLGIASIELQDYERALQALDMVLEWEPEH 1453
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
+ L+ +V F +++ A ++ E+ + YLGL L + K+A +A K
Sbjct: 1454 EEALYNMALVLFNLEEYEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALKAFEK 1513
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
A + EA + L ++++L ++L I + +G++ L Q++
Sbjct: 1514 AALFNPKNEEALYNAATTLIKLNRAQESLGYFDRILEISPDNLDVLNYKGVIFCMLDQYR 1573
Query: 603 KAIKDLSSGLGIDPSNIECLY 623
+A++ L DP NI+ +Y
Sbjct: 1574 EALRAFDGVLKRDPENIKAIY 1594
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 102/229 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+ N +Y A F+Q+L+ P PE+L G L+ A+ F +A NP
Sbjct: 1461 ALVLFNLEEYEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALKAFEKAALFNPK 1520
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA L + E++ + LE P++ D+L+ +G++ + A+
Sbjct: 1521 NEEALYNAATTLIKLNRAQESLGYFDRILEISPDNLDVLNYKGVIFCMLDQYREALRAFD 1580
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+K D EN A +G+ Y+ A A +A+ ++ ++ +L +
Sbjct: 1581 GVLKRDPENIKAIYNVGVVCFKQKLYETAARAFKEALSINPWHEQSLRYLGISLAKIGEY 1640
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
E+AL+ +++L I+ + ++ + RG++L L + +AI+ L I P
Sbjct: 1641 EEALKAFEKLLRINPQDVQSMNYRGVILGKLERFGEAIRAFDEILRIYP 1689
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 12/280 (4%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ ++++ S S + RGIA + G+ A IF +++ P + +A G+G Q
Sbjct: 1195 LEKLAREGSASKETLYDRGIALLELGRQEEAFEIFSDLIEIYPDFKKAWYGKGLVLFSQE 1254
Query: 430 ELEAAISDFTEAIQ-------SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
E A+ +A+ P +A + G ++ G+ +A K LE P +
Sbjct: 1255 HYEEALKALKQAVPDGEESKIGEPELEDALTKIGLSQLKTGKYEDACDTFEKVLEKNPMA 1314
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
ADI + G+V AVE + +++ + ++A GLAL S+ Y++A +A
Sbjct: 1315 ADIWYLSGLVMRGLDQNEDAVEAFNRALEIKPDLRAAQEQKGLALLSLCRYEEARDAFSS 1374
Query: 543 AIQL-DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI---DKRFSKAYHLRGLLLHGL 598
++ N + ++ L N E A + L++VL +++A ++ G+ L
Sbjct: 1375 VLEESPENADVLYNRAVASFKTL-NFEDAAKDLEKVLLFAPDSPDYTEACYMLGIASIEL 1433
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+++A++ L L +P + E LY A + EY EA
Sbjct: 1434 QDYERALQALDMVLEWEPEHEEALYNMALVLFNLEEYEEA 1473
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ IF+++L + P L +G A +++ ++ F ++ P A ++RG
Sbjct: 958 YEEALEIFEKVLSQTPERKTVLFRKGVALKALGKIQDSLDIFDLVLKLKPDCSYALEQRG 1017
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A LG EA + +ALE+ PN + + +G+ F+ +F A+E ++L +
Sbjct: 1018 YALFELGRYGEAAEAFKEALEYCPNKTYMQYLKGLAFFRIGNFTEALEGFGKALELGCQK 1077
Query: 517 KSAYTYLGLALSSIGEYKKAEEAH 540
Y GL+ G+Y A +A
Sbjct: 1078 PDIPYYTGLSCFETGDYAGALKAF 1101
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 7/242 (2%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
+++ ++ + RG + G Y +A+ F++IL E P EA +G A
Sbjct: 531 KLASENPYDLEIQCRRGKLAMEVGNYETALQAFERILTEKPASREAWYRKGLALLKLENF 590
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ F + +A +G A+ L E A++ + LE +P+S + RG+
Sbjct: 591 EEAVKAFDAVATKDADYEDAGVLKGFAQMKLKECASALETFERVLEKKPDSDTAWYYRGM 650
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + + A + + +L+ +A+ Y L G+Y+ A EA ++ D L
Sbjct: 651 ILYTLQRQEEAAKAFESASRLNPGLYTAFEYRAKCLFETGQYEAAFEAFEAVLEKDPENL 710
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDK-------RFSKAYHLRGLLLHGLGQHKKA 604
A +L +++A++ L +L D R +A G+ LGQ++ A
Sbjct: 711 SALEKRAICLFELKKNKEAVDALSTLLESDPERKDTKLRLEEAKLRLGIEYFELGQYENA 770
Query: 605 IK 606
++
Sbjct: 771 LE 772
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 107/254 (42%), Gaps = 4/254 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA + Y A+ D +L+ +P + EAL E E A F + ++++P
Sbjct: 1427 GIASIELQDYERALQALDMVLEWEPEHEEALYNMALVLFNLEEYEEAARTFEQLLETSPE 1486
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E+ G L EA++ KA F P + + L+ K ++
Sbjct: 1487 DPESLNYLGLCLLELDNLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRAQESLGYFD 1546
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL--TQFYQDLA 565
+++ +N Y G+ + +Y++A A ++ D ++A ++ F Q L
Sbjct: 1547 RILEISPDNLDVLNYKGVIFCMLDQYREALRAFDGVLKRDPENIKAIYNVGVVCFKQKL- 1605
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E A ++ L I+ ++ G+ L +G++++A+K L I+P +++ + R
Sbjct: 1606 -YETAARAFKEALSINPWHEQSLRYLGISLAKIGEYEEALKAFEKLLRINPQDVQSMNYR 1664
Query: 626 ASCYHAIGEYREAV 639
+ + EA+
Sbjct: 1665 GVILGKLERFGEAI 1678
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 2/237 (0%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
F ++LK +P ++L RG + E A+ + + P + G A LG
Sbjct: 461 FAEVLKINPEDIDSLYNRGISLLKLGRKETALEYLEKVVSLRPDYPDLSYSLGVALTELG 520
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
E +A++ K P +I RG + + ++ A++ + ++ A+
Sbjct: 521 EYEKALETFEKLASENPYDLEIQCRRGKLAMEVGNYETALQAFERILTEKPASREAWYRK 580
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ-DLANSEKALECLQQVLYIDK 582
GLAL + +++A +A D ++ +A G L F Q L ALE ++VL
Sbjct: 581 GLALLKLENFEEAVKAFDAVATKDADYEDA-GVLKGFAQMKLKECASALETFERVLEKKP 639
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A++ RG++L+ L + ++A K S ++P RA C G+Y A
Sbjct: 640 DSDTAWYYRGMILYTLQRQEEAAKAFESASRLNPGLYTAFEYRAKCLFETGQYEAAF 696
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
RI + ++D +G+ +Y A+ FD +LK DP +A+ G Q+
Sbjct: 1547 RILEISPDNLDVLNYKGVIFCMLDQYREALRAFDGVLKRDPENIKAIYNVGVVCFKQKLY 1606
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A F EA+ NP ++ + G + A +GE EA++ K L P ++ RG+
Sbjct: 1607 ETAARAFKEALSINPWHEQSLRYLGISLAKIGEYEEALKAFEKLLRINPQDVQSMNYRGV 1666
Query: 492 VNFKFKDFNAAVEDLSACVKL 512
+ K + F A+ +++
Sbjct: 1667 ILGKLERFGEAIRAFDEILRI 1687
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+++ D + ++ + G+Y A F +++ D EAL TA Q E A+
Sbjct: 903 TETTYTDLIYMKSLSLLRLGRYKEAEVGFKEVIFRDSDNAEALAHLSTACFKQEHYEEAL 962
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
F + + P R+G A ALG+ +++ L+ +P+ + L +RG F+
Sbjct: 963 EIFEKVLSQTPERKTVLFRKGVALKALGKIQDSLDIFDLVLKLKPDCSYALEQRGYALFE 1022
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYL-GLALSSIGEYKKAEEAHLKAIQL 546
+ A E ++ NK+ YL GLA IG + +A E KA++L
Sbjct: 1023 LGRYGEAAEAFKEALEYCP-NKTYMQYLKGLAFFRIGNFTEALEGFGKALEL 1073
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V FR +G+A GK ++ IFD +LK P AL RG A A F
Sbjct: 977 TVLFR--KGVALKALGKIQDSLDIFDLVLKLKPDCSYALEQRGYALFELGRYGEAAEAFK 1034
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EA++ P+ +G A +G EA++ KALE DI + G+ F+ D+
Sbjct: 1035 EALEYCPNKTYMQYLKGLAFFRIGNFTEALEGFGKALELGCQKPDIPYYTGLSCFETGDY 1094
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A++ + ++ LAL +G ++A
Sbjct: 1095 AGALKAFDRLPEEGTQDPDVLQKRALALFELGRQEEA 1131
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 108/268 (40%), Gaps = 33/268 (12%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR---AFQRELEAAISDF 438
D G++ G YA A+ FD++ +E P+ L R A Q E +A++
Sbjct: 1079 DIPYYTGLSCFETGDYAGALKAFDRLPEEGTQDPDVLQKRALALFELGRQEEAVSAVNFL 1138
Query: 439 TEAIQSNPSAGEA-----------------------WKRRGQARAALGESVEAIQDLSKA 475
E N + GE ++ A LG+ EA+ L K
Sbjct: 1139 LELSAENLTIGEKGNEPEGNEPEKSPEENNRICQELLEKFASALIELGKPEEALLPLEKL 1198
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
S + L++RGI + A E S +++ + K A+ GL L S Y++
Sbjct: 1199 AREGSASKETLYDRGIALLELGRQEEAFEIFSDLIEIYPDFKKAWYGKGLVLFSQEHYEE 1258
Query: 536 AEEAHLKAI------QLDRNFLE-AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
A +A +A+ ++ LE A + E A + ++VL + + +
Sbjct: 1259 ALKALKQAVPDGEESKIGEPELEDALTKIGLSQLKTGKYEDACDTFEKVLEKNPMAADIW 1318
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+L GL++ GL Q++ A++ + L I P
Sbjct: 1319 YLSGLVMRGLDQNEDAVEAFNRALEIKP 1346
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
RLN+ K +E +++D A R L L + +A+ DS+L +++D
Sbjct: 181 RLNEAIKAF---EEAIKIDPSYFEAWNCRC--FALMKLEVYEEALEAFDSMLRIYPDVKD 235
Query: 72 IC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
I +RA +L+ + ++ + +LDP A++ +G + G+ EEAL+ EK
Sbjct: 236 IWYSRALALLKLQNYAEAVQSFARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKLL 295
Query: 131 EH 132
E+
Sbjct: 296 EY 297
>gi|434388094|ref|YP_007098705.1| TPR repeat-containing protein [Chamaesiphon minutus PCC 6605]
gi|428019084|gb|AFY95178.1| TPR repeat-containing protein [Chamaesiphon minutus PCC 6605]
Length = 779
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 120/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I G++ SA++ + + L+ P G EL AI+++T+A++ +
Sbjct: 459 NRAILYTQSGEFTSAVADYHRALEIQPELVSVYNNLGNNYCQMGELALAIANYTQALELD 518
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R G+ EA+ D +A+ +PN + RGI + + + AA+ D
Sbjct: 519 PEFAVAYTNRANVYRIQGDCHEALTDYDRAIALDPNLVIGYYNRGICHRQIGNHQAAIAD 578
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + AY + G A +G+ A + + I D N L A + +L
Sbjct: 579 YTQTLALNSQYYYAYYHRGNARQYVGDKHGAIADYTQTIYFDPNHLHAHYNRAIVRSELH 638
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+E L++ + I F++AY+ RG +L H+ A+ D + + P ++ Y R
Sbjct: 639 DVQGAIEDLERAIAISPTFAQAYYQRGWVLSRNDDHQFALADYQRAIDLQPDYLDAYYYR 698
Query: 626 ASCYHAIGEYREAV 639
YH++G+ A+
Sbjct: 699 GYSYHSLGDLSAAI 712
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%)
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
L +P + + RGTA+A + AI+D++ AI NP A+ RG R LG+
Sbjct: 379 LLPNPTDALSYVMRGTAKAQLFDDNGAIADYSTAISLNPRLLVAYNNRGNLRQNLGDMDG 438
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A+ D S LE +P+SA + R I+ + +F +AV D +++ E S Y LG
Sbjct: 439 ALADFSAVLEIDPHSAIAYNNRAILYTQSGEFTSAVADYHRALEIQPELVSVYNNLGNNY 498
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+GE A + +A++LD F A+ + Y+ + +AL + + +D
Sbjct: 499 CQMGELALAIANYTQALELDPEFAVAYTNRANVYRIQGDCHEALTDYDRAIALDPNLVIG 558
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y+ RG+ +G H+ AI D + L ++ Y R + +G+ A+
Sbjct: 559 YYNRGICHRQIGNHQAAIADYTQTLALNSQYYYAYYHRGNARQYVGDKHGAI 610
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G A++ +D+ + DP RG +AAI+D+T+ + N A+
Sbjct: 535 QGDCHEALTDYDRAIALDPNLVIGYYNRGICHRQIGNHQAAIADYTQTLALNSQYYYAYY 594
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG AR +G+ AI D ++ + F+PN + R IV + D A+EDL + +
Sbjct: 595 HRGNARQYVGDKHGAIADYTQTIYFDPNHLHAHYNRAIVRSELHDVQGAIEDLERAIAIS 654
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
AY G LS +++ A + +AI L ++L+A+ + Y L + A+
Sbjct: 655 PTFAQAYYQRGWVLSRNDDHQFALADYQRAIDLQPDYLDAYYYRGYSYHSLGDLSAAIAD 714
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ ID +++ AY+ RG + +G AI D
Sbjct: 715 FSHSISIDPKYAPAYYQRGKIYTQIGDITGAIAD 748
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 41/306 (13%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T I++ + VD RG G A+S +D+ + DP +A GRG AR + +
Sbjct: 275 TEIARHVQLLVD----RGTEFYEVGNCQQALSAYDRAISLDPQCVDAYCGRGNARRYMGD 330
Query: 431 LEAAISDFTEAIQSNPSAGEA-------------------------------------WK 453
+ DF+ A++ +P G A +
Sbjct: 331 YPGSWEDFSTAVELDPDRGIAYIGRALAACFKPQSDYRPNDDFERGKNLLPNPTDALSYV 390
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A+A L + AI D S A+ P + RG + D + A+ D SA +++D
Sbjct: 391 MRGTAKAQLFDDNGAIADYSTAISLNPRLLVAYNNRGNLRQNLGDMDGALADFSAVLEID 450
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ AY + + GE+ A + +A+++ + + +L Y + A+
Sbjct: 451 PHSAIAYNNRAILYTQSGEFTSAVADYHRALEIQPELVSVYNNLGNNYCQMGELALAIAN 510
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
Q L +D F+ AY R + G +A+ D + +DP+ + Y R C+ IG
Sbjct: 511 YTQALELDPEFAVAYTNRANVYRIQGDCHEALTDYDRAIALDPNLVIGYYNRGICHRQIG 570
Query: 634 EYREAV 639
++ A+
Sbjct: 571 NHQAAI 576
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++I++D L +RGI G + +AI+ + Q L + Y A RG AR + +
Sbjct: 547 RAIALDPNLVIGYYNRGICHRQIGNHQAAIADYTQTLALNSQYYYAYYHRGNARQYVGDK 606
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
AI+D+T+ I +P+ A R R+ L + AI+DL +A+ P A ++RG
Sbjct: 607 HGAIADYTQTIYFDPNHLHAHYNRAIVRSELHDVQGAIEDLERAIAISPTFAQAYYQRGW 666
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V + D A+ D + L + AY Y G + S+G+ A +I +D +
Sbjct: 667 VLSRNDDHQFALADYQRAIDLQPDYLDAYYYRGYSYHSLGDLSAAIADFSHSISIDPKYA 726
Query: 552 EAWGHLTQFYQDLANSEKALECLQQV--LYIDKRFSKAYH 589
A+ + Y + + A+ Q LY+D+ SK Y
Sbjct: 727 PAYYQRGKIYTQIGDITGAIADYHQAANLYLDRGDSKTYQ 766
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 108/242 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG A+ AI+ + + +P A RG R +++ A++DF+ ++
Sbjct: 390 VMRGTAKAQLFDDNGAIADYSTAISLNPRLLVAYNNRGNLRQNLGDMDGALADFSAVLEI 449
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P + A+ R GE A+ D +ALE +P + + G + + A+
Sbjct: 450 DPHSAIAYNNRAILYTQSGEFTSAVADYHRALEIQPELVSVYNNLGNNYCQMGELALAIA 509
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + ++LD E AYT G+ +A + +AI LD N + + + ++ +
Sbjct: 510 NYTQALELDPEFAVAYTNRANVYRIQGDCHEALTDYDRAIALDPNLVIGYYNRGICHRQI 569
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
N + A+ Q L ++ ++ AY+ RG +G AI D + + DP+++ Y
Sbjct: 570 GNHQAAIADYTQTLALNSQYYYAYYHRGNARQYVGDKHGAIADYTQTIYFDPNHLHAHYN 629
Query: 625 RA 626
RA
Sbjct: 630 RA 631
>gi|428212529|ref|YP_007085673.1| hypothetical protein Oscil6304_2088 [Oscillatoria acuminata PCC 6304]
gi|428000910|gb|AFY81753.1| TPR repeat-containing protein [Oscillatoria acuminata PCC 6304]
Length = 1049
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 117/229 (51%), Gaps = 6/229 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + G + AI ++Q +K +P EA + RG ARA +L AISDFTE I+ N
Sbjct: 787 NRGYARKDSGDLSGAIDDYNQAIKINPQDAEAYVRRGIARAHSGDLPGAISDFTETIKIN 846
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG AR G+ AI D ++A++ P A + RG D + A+ D
Sbjct: 847 PQYALAYNNRGNARKDSGDLAGAIDDYNQAIKINPQLALAYNNRGNARRNSGDLSGAISD 906
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQ 562
+ +K++ + AY G+A S + + A +AI+++ + +A+ G ++ +
Sbjct: 907 FTEAIKINPQYADAYYNRGVASSILEDMPGAISDFTEAIKINPQYADAYLNRGIVSSMSE 966
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
D+ A+ + + I+ +++ AY+ RG+ + + I+D+ G
Sbjct: 967 DMPG---AISDFTEAIKINPQYADAYYNRGVARYLSEDKQGGIEDIQKG 1012
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 121/261 (46%), Gaps = 7/261 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + G AI F+Q +K +P A RG AR + + I+D+T+AI N
Sbjct: 685 NRGAIRKDLGDVQGAIDDFNQAIKINPQNTNAYYNRGNARKESGDWQGVIADYTKAIDLN 744
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG AR G+ AI D +KA+E P A + RG D + A++D
Sbjct: 745 PQYADAYNNRGVARKDSGDLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSGAIDD 804
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ ++ AY G+A + G+ A + I+++ + A+ + +D
Sbjct: 805 YNQAIKINPQDAEAYVRRGIARAHSGDLPGAISDFTETIKINPQYALAYNNRGNARKDSG 864
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A++ Q + I+ + + AY+ RG G AI D + + I+P + Y R
Sbjct: 865 DLAGAIDDYNQAIKINPQLALAYNNRGNARRNSGDLSGAISDFTEAIKINPQYADAYYNR 924
Query: 626 ASC-------YHAIGEYREAV 639
AI ++ EA+
Sbjct: 925 GVASSILEDMPGAISDFTEAI 945
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 120/244 (49%), Gaps = 6/244 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ + G + AI+ + + ++ +P+Y A RG AR +L AI D+ +AI+ N
Sbjct: 753 NRGVARKDSGDLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSGAIDDYNQAIKIN 812
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RRG ARA G+ AI D ++ ++ P A + RG D A++D
Sbjct: 813 PQDAEAYVRRGIARAHSGDLPGAISDFTETIKINPQYALAYNNRGNARKDSGDLAGAIDD 872
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQ 562
+ +K++ + AY G A + G+ A +AI+++ + +A+ G + +
Sbjct: 873 YNQAIKINPQLALAYNNRGNARRNSGDLSGAISDFTEAIKINPQYADAYYNRGVASSILE 932
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
D+ A+ + + I+ +++ AY RG++ AI D + + I+P +
Sbjct: 933 DMPG---AISDFTEAIKINPQYADAYLNRGIVSSMSEDMPGAISDFTEAIKINPQYADAY 989
Query: 623 YLRA 626
Y R
Sbjct: 990 YNRG 993
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 112/231 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G + I+ + + + +P Y +A RG AR +L AI+D+T+AI+ N
Sbjct: 719 NRGNARKESGDWQGVIADYTKAIDLNPQYADAYNNRGVARKDSGDLSGAIADYTKAIELN 778
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG AR G+ AI D ++A++ P A+ RGI D A+ D
Sbjct: 779 PLYAGAYYNRGYARKDSGDLSGAIDDYNQAIKINPQDAEAYVRRGIARAHSGDLPGAISD 838
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ + AY G A G+ A + + +AI+++ A+ + ++
Sbjct: 839 FTETIKINPQYALAYNNRGNARKDSGDLAGAIDDYNQAIKINPQLALAYNNRGNARRNSG 898
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ A+ + + I+ +++ AY+ RG+ L AI D + + I+P
Sbjct: 899 DLSGAISDFTEAIKINPQYADAYYNRGVASSILEDMPGAISDFTEAIKINP 949
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ N G + AIS F + +K +P Y +A RG A + ++ AISDFTEAI+ N
Sbjct: 889 NRGNARRNSGDLSGAISDFTEAIKINPQYADAYYNRGVASSILEDMPGAISDFTEAIKIN 948
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG + + AI D ++A++ P AD + RG+ + +D +ED
Sbjct: 949 PQYADAYLNRGIVSSMSEDMPGAISDFTEAIKINPQYADAYYNRGVARYLSEDKQGGIED 1008
Query: 506 LSACVKL 512
+ +L
Sbjct: 1009 IQKGEQL 1015
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A R EA ++ +T AI P + A+ RG R LG+ AI D ++A++ P
Sbjct: 655 GILSALNRYQEA-VAAYTIAIDITPHS-WAYNNRGAIRKDLGDVQGAIDDFNQAIKINPQ 712
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ + + RG + D+ + D + + L+ + AY G+A G+ A +
Sbjct: 713 NTNAYYNRGNARKESGDWQGVIADYTKAIDLNPQYADAYNNRGVARKDSGDLSGAIADYT 772
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+L+ + A+ + +D + A++ Q + I+ + ++AY RG+ G
Sbjct: 773 KAIELNPLYAGAYYNRGYARKDSGDLSGAIDDYNQAIKINPQDAEAYVRRGIARAHSGDL 832
Query: 602 KKAIKDLSSGLGIDP 616
AI D + + I+P
Sbjct: 833 PGAISDFTETIKINP 847
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + A+ F+Q + D EA +G + F ++ A++ +AIQ
Sbjct: 584 ARGLALSAADRDREAVWSFEQAIVIDNTPHEAWREQGKSLLFLKQYPQALASIDQAIQRQ 643
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ R +AL EA+ + A++ P+S + RG + D A++D
Sbjct: 644 NQDAVLYMFRAGILSALNRYQEAVAAYTIAIDITPHSW-AYNNRGAIRKDLGDVQGAIDD 702
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ +N +AY G A G+++ + KAI L+ + +A+ + +D
Sbjct: 703 FNQAIKINPQNTNAYYNRGNARKESGDWQGVIADYTKAIDLNPQYADAYNNRGVARKDSG 762
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A+ + + ++ ++ AY+ RG G AI D + + I+P + E Y+R
Sbjct: 763 DLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSGAIDDYNQAIKINPQDAEA-YVR 821
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A AIS F + +K +P Y +A + RG + ++ AISDFTEA
Sbjct: 919 DAYYNRGVASSILEDMPGAISDFTEAIKINPQYADAYLNRGIVSSMSEDMPGAISDFTEA 978
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
I+ NP +A+ RG AR + I+D+ K
Sbjct: 979 IKINPQYADAYYNRGVARYLSEDKQGGIEDIQKG 1012
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI F +AI N ++ AW RG A +A EA+ +A+ + + E+G
Sbjct: 562 EQAIEAFNQAIHLNRNSYAAWYARGLALSAADRDREAVWSFEQAIVIDNTPHEAWREQGK 621
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K + A+ + ++ ++ Y + LS++ Y++A A+ AI + +
Sbjct: 622 SLLFLKQYPQALASIDQAIQRQNQDAVLYMFRAGILSALNRYQEAVAAYTIAIDITPHSW 681
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ + +DL + + A++ Q + I+ + + AY+ RG G + I D +
Sbjct: 682 -AYNNRGAIRKDLGDVQGAIDDFNQAIKINPQNTNAYYNRGNARKESGDWQGVIADYTKA 740
Query: 612 LGIDP 616
+ ++P
Sbjct: 741 IDLNP 745
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 10/150 (6%)
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
KF D AA+ + G L +G ++A EA +AI L+RN AW
Sbjct: 523 KFVDMIAALAVTQKTAPKQDATARDWINYGNQLWRVGRSEQAIEAFNQAIHLNRNSYAAW 582
Query: 555 GHLTQFYQDLANS-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + LA S +A+ +Q + ID +A+ +G L L Q+ +A+ +
Sbjct: 583 -----YARGLALSAADRDREAVWSFEQAIVIDNTPHEAWREQGKSLLFLKQYPQALASID 637
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + RA A+ Y+EAV
Sbjct: 638 QAIQRQNQDAVLYMFRAGILSALNRYQEAV 667
>gi|15678111|ref|NP_275226.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621120|gb|AAB84589.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 379
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 121/248 (48%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I K+ + ++G+ G+Y A+ +++ LK +P Y A +
Sbjct: 72 CYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKEL 131
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+ + +A+Q NP +AW +G L + +A++ KA+E P +
Sbjct: 132 GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGT 191
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+GI K + A++ ++L+ ++ A+ GL + +G Y ++ E + KA+Q++
Sbjct: 192 KGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINP 251
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
EAW + +L E+ALEC ++ L ID K ++ +GL+L LG++K A++
Sbjct: 252 KLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECF 311
Query: 609 SSGLGIDP 616
L I+P
Sbjct: 312 QKALEINP 319
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 126/240 (52%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ +++ILK +P EA +G + A+ + +A++ NP AW +
Sbjct: 69 ALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVL 128
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG EA++ KAL+ P AD + +G V K + A++ ++L+ +N A
Sbjct: 129 KELGRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRA 188
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G+ L ++ Y++A + + K +QL+ +AW + + +L +++LEC ++ L
Sbjct: 189 WGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQ 248
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I+ + ++A++ +G++L LG++++A++ L IDP + + + +G+Y++A+
Sbjct: 249 INPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDAL 308
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 115/223 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+ +++ L+ +P +A +G+ + ++ + A+ F +AI+ NP AW
Sbjct: 132 GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGT 191
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G L EA++ K L+ P + +G+V + ++ ++E ++++
Sbjct: 192 KGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINP 251
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G+ LS +G Y++A E + KA+++D + W + ++L + ALEC
Sbjct: 252 KLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECF 311
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
Q+ L I+ F+ A+ +G++L L + ++++K L ++P
Sbjct: 312 QKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALKLNPP 354
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 96/184 (52%)
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G++ G+ EA+++ KAL+ PN+ +ILH I K K A+E +K + +
Sbjct: 23 GRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEKILKNNPK 82
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ GL L +G Y +A E + KA++++ + AW + ++L ++ALEC +
Sbjct: 83 LAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEALECYE 142
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ L I+ + + A++ +G +L L ++KKA+K + ++P N + H + Y
Sbjct: 143 KALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGTKGITLHNLKIY 202
Query: 636 REAV 639
EA+
Sbjct: 203 EEAL 206
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ G+Y ++ +++ L+ +P EA +G + E A+ + +A++ +
Sbjct: 225 NKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEID 284
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
P + W +G LG+ +A++ KALE P AD +GI+
Sbjct: 285 PEDDKTWNNKGLVLEELGKYKDALECFQKALEINPEFADAWKWKGII 331
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
N+ +++L + + +KALQ++P L +A+ KG S LGR EEAL +EK E
Sbjct: 225 NKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALE 282
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K++ ++ +L+ +G+ G+Y A+ +++ L+ DP + +G +
Sbjct: 245 KALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKY 304
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD-ILHER 489
+ A+ F +A++ NP +AWK +G L + E+++ KAL+ P + ++H R
Sbjct: 305 KDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALKLNPPKQNTMVHAR 363
>gi|427739440|ref|YP_007058984.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
sp. PCC 7116]
gi|427374481|gb|AFY58437.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
sp. PCC 7116]
Length = 1173
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 109/236 (46%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I + ++ F +RG AQ + Y AI+ + + + P RG Q++ +
Sbjct: 910 IGLTPQLAYLFYNNRGNAQYEQENYKGAIADYTKAISLKPKDAVFYWNRGDVYLTQKQYQ 969
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+DFT AI+ NP A+ +RG A + AI D +KA+ EPN RG V
Sbjct: 970 QAIADFTAAIRLNPDYASAYNKRGIALEHGKDYKGAIADYTKAISLEPNQGVFYSNRGGV 1029
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
K + A++D +A ++L++EN SAY+ +A +YK A H +AI +
Sbjct: 1030 YLTQKQYQQAIDDFTAAIRLNQENASAYSIRAIARDMQEDYKGAIADHTEAIGIKPKEAR 1089
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ Y KA+ + +D AY LR L GLG +KAI+DL
Sbjct: 1090 YYNRRGNTYLKNKEYRKAIADYTTAISLDVDDGDAYGLRSLAYAGLGDKQKAIQDL 1145
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 1/264 (0%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
+S V + RG A GK ++ F++ L P RG +R ++ +A +
Sbjct: 845 RSSHVPAYIGRGKAYAKLGKRQQSLQDFNKALSLQPKNSLIYSSRGYSRLLLKDYQAGVE 904
Query: 437 DFTEAIQSNPS-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D+ +AI P A + RG A+ AI D +KA+ +P A RG V
Sbjct: 905 DYNKAIGLTPQLAYLFYNNRGNAQYEQENYKGAIADYTKAISLKPKDAVFYWNRGDVYLT 964
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
K + A+ D +A ++L+ + SAY G+AL +YK A + KAI L+ N +
Sbjct: 965 QKQYQQAIADFTAAIRLNPDYASAYNKRGIALEHGKDYKGAIADYTKAISLEPNQGVFYS 1024
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ Y ++A++ + +++ + AY +R + +K AI D + +GI
Sbjct: 1025 NRGGVYLTQKQYQQAIDDFTAAIRLNQENASAYSIRAIARDMQEDYKGAIADHTEAIGIK 1084
Query: 616 PSNIECLYLRASCYHAIGEYREAV 639
P R + Y EYR+A+
Sbjct: 1085 PKEARYYNRRGNTYLKNKEYRKAI 1108
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 16/262 (6%)
Query: 387 RGIAQVNEGKYASAISIF-DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG A G A I+ + D I + E RG R Q++ A++D+T+A+
Sbjct: 786 RGYAHYLLGDTAKGIADYNDAIRLNSKLAYEFYTQRGDIRWIQKDYNGAVADYTQALSFR 845
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S A+ RG+A A LG+ +++QD +KAL +P ++ I RG KD+ A VED
Sbjct: 846 SSHVPAYIGRGKAYAKLGKRQQSLQDFNKALSLQPKNSLIYSSRGYSRLLLKDYQAGVED 905
Query: 506 LSACVKLDKENKSAYTYL---GLALSSIGEYKKAEEAHLKAIQL-DRNFLEAWG----HL 557
+ + L + AY + G A YK A + KAI L ++ + W +L
Sbjct: 906 YNKAIGLTPQ--LAYLFYNNRGNAQYEQENYKGAIADYTKAISLKPKDAVFYWNRGDVYL 963
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
TQ ++A+ + ++ ++ AY+ RG+ L +K AI D + + ++P+
Sbjct: 964 TQ-----KQYQQAIADFTAAIRLNPDYASAYNKRGIALEHGKDYKGAIADYTKAISLEPN 1018
Query: 618 NIECLYLRASCYHAIGEYREAV 639
R Y +Y++A+
Sbjct: 1019 QGVFYSNRGGVYLTQKQYQQAI 1040
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F +RG + + +Y AI+ F ++ +P Y A RG A ++ + AI+D+T+AI
Sbjct: 954 FYWNRGDVYLTQKQYQQAIADFTAAIRLNPDYASAYNKRGIALEHGKDYKGAIADYTKAI 1013
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
P+ G + RG + +AI D + A+ +A R I +D+ A
Sbjct: 1014 SLEPNQGVFYSNRGGVYLTQKQYQQAIDDFTAAIRLNQENASAYSIRAIARDMQEDYKGA 1073
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + + + + Y G EY+KA + AI LD + +A+G + Y
Sbjct: 1074 IADHTEAIGIKPKEARYYNRRGNTYLKNKEYRKAIADYTTAISLDVDDGDAYGLRSLAYA 1133
Query: 563 DLANSEKALECLQQ 576
L + +KA++ LQ+
Sbjct: 1134 GLGDKQKAIQDLQK 1147
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 136/327 (41%), Gaps = 52/327 (15%)
Query: 359 SNEAKRNKKF--CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPM 413
NE R++++ + +S I DF S G+A + + KY AI F K +P
Sbjct: 549 GNELWRSRRYKEAQSAFERSTKIKPDFYHGWYSHGMALMRQEKYPEAIKSFKLANKYNPE 608
Query: 414 -----------------YPEALIGRGTARAFQRELEAAISDF------------------ 438
YPEAL + F++ ++ DF
Sbjct: 609 SDRALRQLGDAYWYSGEYPEAL------QTFKQTIQLRPDDFILHNWLADAFNQLGRHPE 662
Query: 439 -----TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
++IQ NP+ E++ RR + R+ LG+ EAI+DL+KAL+ +P+ A +R +V
Sbjct: 663 ALQAGNQSIQLNPNLAESYIRRSRTRSNLGDYSEAIKDLNKALKLQPDLAIAYVQRALVR 722
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ KD+ A+ D ++L AY GL + + + + KA+Q+ +
Sbjct: 723 YWQKDYQEALNDTKTAIRLQPNFVDAYWVSGLVHAQMNNREGFIKDFNKALQIQPDNAVI 782
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL-RGLLLHGLGQHKKAIKDLSSGL 612
+ + L ++ K + + ++ + + ++ RG + + A+ D + L
Sbjct: 783 YAQRGYAHYLLGDTAKGIADYNDAIRLNSKLAYEFYTQRGDIRWIQKDYNGAVADYTQAL 842
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAV 639
S++ R Y +G+ ++++
Sbjct: 843 SFRSSHVPAYIGRGKAYAKLGKRQQSL 869
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 5/142 (3%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+IS++ F +RG + + +Y AI F ++ + A R AR Q +
Sbjct: 1010 TKAISLEPNQGVFYSNRGGVYLTQKQYQQAIDDFTAAIRLNQENASAYSIRAIARDMQED 1069
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D TEAI P + RRG E +AI D + A+ + + D R
Sbjct: 1070 YKGAIADHTEAIGIKPKEARYYNRRGNTYLKNKEYRKAIADYTTAISLDVDDGDAYGLRS 1129
Query: 491 IVNFKFKDFNAAVEDLSACVKL 512
+ D A++DL ++
Sbjct: 1130 LAYAGLGDKQKAIQDLQKASQI 1151
>gi|430741335|ref|YP_007200464.1| hypothetical protein Sinac_0326 [Singulisphaera acidiphila DSM
18658]
gi|430013055|gb|AGA24769.1| tetratricopeptide repeat protein [Singulisphaera acidiphila DSM
18658]
Length = 779
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 124/255 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A +Y AI+ +++ ++ DP A RG A + + + + AI+D+ EAI+
Sbjct: 143 FNRGYAWSERQEYDKAIADYNEAIRLDPQLTLAYHNRGYAWSQKNDYDKAITDYNEAIRL 202
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG A + + + I D ++A+ +P+ A R + +D++ +
Sbjct: 203 DPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPDDAPTYFNRAHAWSQKEDYDKTIA 262
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD ++ SAY G A S G+ KA + + I+LD A+ + +
Sbjct: 263 DYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQK 322
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ +KA+ + + +D + AY +G G+H KAI D + + +DP+N
Sbjct: 323 GDLDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLN 382
Query: 625 RASCYHAIGEYREAV 639
R+ + EY +A+
Sbjct: 383 RSHAWSEKEEYDKAI 397
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+R A + +Y AI+ ++I++ DP A RG A ++E + AI+D EAI+
Sbjct: 381 LNRSHAWSEKEEYDKAIADANEIIRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRL 440
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG A E +AI D +KA+ +P + RG + +D++ A+
Sbjct: 441 DPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIA 500
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD SAY G A S +Y KA KAI+LD A+ + +
Sbjct: 501 DFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQK 560
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+KA+ + + +D + AY RG +H KAI D + + IDP
Sbjct: 561 EGYDKAIADYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADYNEAIRIDPKAANAYIY 620
Query: 625 RASCYHAIGEYREAV 639
RA + +Y +A+
Sbjct: 621 RAITWSRKKDYDKAI 635
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 13/265 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG A + ++ AI+ ++ ++ DP A + RG A + E + AI+DF +AI+
Sbjct: 415 FKRGYAWGKKKEHDKAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRL 474
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG A + +AI D ++A++ +PN RG + D++ A+
Sbjct: 475 DPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIA 534
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFY 561
D + ++LD N AY G A S Y KA + +AI+LD N A+ GH
Sbjct: 535 DFNKAIRLDPINAPAYFNRGHAWSQKEGYDKAIADYNEAIRLDPNNALAYLNRGHARSKT 594
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
Q+ +KA+ + + ID + + AY R + + KAI D + + IDP +
Sbjct: 595 QE---HDKAIADYNEAIRIDPKAANAYIYRAITWSRKKDYDKAITDFTEAIRIDPKDASS 651
Query: 622 LYLRASCY-------HAIGEYREAV 639
R + AI +Y EA+
Sbjct: 652 HSNRGYAWSKKKDYAKAIADYNEAI 676
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 119/255 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A + Y I+ +++ ++ DP R A + + + + I+D+ EAI+
Sbjct: 211 FNRGYAWSKKKDYDKTIADYNEAIRLDPDDAPTYFNRAHAWSQKEDYDKTIADYNEAIRL 270
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ RG A + G+ +AI D ++ + +P + RG + D + A+
Sbjct: 271 DPDDASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIA 330
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD + SAY G A GE+ KA +AI+LD A+ + + + +
Sbjct: 331 DFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAWSEK 390
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+KA+ +++ +D + + AY RG +H KAI D + + +DP+N
Sbjct: 391 EEYDKAIADANEIIRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRLDPTNAWAYLN 450
Query: 625 RASCYHAIGEYREAV 639
R + E+ +A+
Sbjct: 451 RGYAWDEKEEHDKAI 465
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 122/257 (47%), Gaps = 4/257 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A +G AI+ +++ ++ DP A RG A + +L+ AI+DF EAI+
Sbjct: 279 FNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIADFDEAIRL 338
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ +G A GE +AI D ++A+ +P + R + ++++ A+
Sbjct: 339 DPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAWSEKEEYDKAIA 398
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY--Q 562
D + ++LD +N AY G A E+ KA +AI+LD AW +L + Y
Sbjct: 399 DANEIIRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRLDP--TNAWAYLNRGYAWD 456
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+ +KA+ + + +D + AY RG + KAI D + + +DP+
Sbjct: 457 EKEEHDKAITDFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSAY 516
Query: 623 YLRASCYHAIGEYREAV 639
R + +Y +A+
Sbjct: 517 LNRGYAWSQKNDYDKAI 533
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 124/262 (47%), Gaps = 7/262 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G A +G++ AI+ F++ ++ DP A + R A + + E + AI+D E I+
Sbjct: 347 VNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAWSEKEEYDKAIADANEIIRL 406
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ +RG A E +AI D ++A+ +P +A RG + ++ + A+
Sbjct: 407 DPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAIT 466
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD N AY G A +Y KA +AIQLD N+ A+ + +
Sbjct: 467 DFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQK 526
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ +KA+ + + +D + AY RG + KAI D + + +DP+N
Sbjct: 527 NDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQKEGYDKAIADYNEAIRLDPNNALAYLN 586
Query: 625 RASCY-------HAIGEYREAV 639
R AI +Y EA+
Sbjct: 587 RGHARSKTQEHDKAIADYNEAI 608
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 116/232 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A + ++ AI+ F++ ++ DP A RG A + + + AI+DF EAIQ
Sbjct: 449 LNRGYAWDEKEEHDKAITDFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQL 508
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG A + + +AI D +KA+ +P +A RG + + ++ A+
Sbjct: 509 DPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQKEGYDKAIA 568
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD N AY G A S E+ KA + +AI++D A+ + +
Sbjct: 569 DYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADYNEAIRIDPKAANAYIYRAITWSRK 628
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ +KA+ + + ID + + ++ RG + KAI D + + ++P
Sbjct: 629 KDYDKAITDFTEAIRIDPKDASSHSNRGYAWSKKKDYAKAIADYNEAIQLNP 680
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 116/239 (48%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ +D+ ++ +P A RG A + ++E + AI+D+ EAI+ +P A+ RG A +
Sbjct: 125 IAEYDEAIRLNPNDASAYFNRGYAWSERQEYDKAIADYNEAIRLDPQLTLAYHNRGYAWS 184
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ +AI D ++A+ +P+ A RG K KD++ + D + ++LD ++ Y
Sbjct: 185 QKNDYDKAITDYNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPDDAPTY 244
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
A S +Y K + +AI+LD + A+ + + + +KA+ + + +
Sbjct: 245 FNRAHAWSQKEDYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIADYNETIRL 304
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + AY RG + G KAI D + +DP++ + + GE+ +A+
Sbjct: 305 DPTNTPAYFNRGYAWNQKGDLDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAI 363
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E I+++ EAI+ NP+ A+ RG A + E +AI D ++A+ +P H RG
Sbjct: 122 EEDIAEYDEAIRLNPNDASAYFNRGYAWSERQEYDKAIADYNEAIRLDPQLTLAYHNRGY 181
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ D++ A+ D + ++LD ++ SAY G A S +Y K + +AI+LD +
Sbjct: 182 AWSQKNDYDKAITDYNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPDDA 241
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + + + +K + + + +D + AY RG G KAI D +
Sbjct: 242 PTYFNRAHAWSQKEDYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIADYNET 301
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +DP+N + R ++ G+ +A+
Sbjct: 302 IRLDPTNTPAYFNRGYAWNQKGDLDKAI 329
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A+ ++ AI+ +++ ++ DP A I R + +++ + AI+DFTEAI+
Sbjct: 585 LNRGHARSKTQEHDKAIADYNEAIRIDPKAANAYIYRAITWSRKKDYDKAITDFTEAIRI 644
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-----NFKFKDF 499
+P + RG A + + +AI D ++A++ P A + R + +++D
Sbjct: 645 DPKDASSHSNRGYAWSKKKDYAKAIADYNEAIQLNPKLASAYNNRAWIWATCPGEQYRDG 704
Query: 500 NAAVEDLSACVKLDKENKSAY-TYLGLALSSIGEYKKAEEAHLKAIQL 546
AVE +L E ++Y + L A + +G++ KA E K +L
Sbjct: 705 QKAVESAHLAWELSGEEITSYLSTLAAAYAELGDFVKAVEWQEKMTKL 752
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 18 KTICEIDELVRVDSVMASAITARI-------ELAKLCSLRNWSKAIRILDSLLAQSYEIQ 70
KTI + +E +R+D ASA R +L K ++ ++++ IR LD +Y
Sbjct: 259 KTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDK--AIADYNETIR-LDPTNTPAY--- 312
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NR + ++Q I D D+A++LDP AY+ +GCA+ G ++A++
Sbjct: 313 --FNRGYAWNQKGDLDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIA 364
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 14 NKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSYE 68
N K I + +E +R+D ASA R +K ++ ++++AIR LD A +Y
Sbjct: 187 NDYDKAITDYNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIR-LDPDDAPTY- 244
Query: 69 IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NRA +SQ E + I D ++A++LDP AY +G A+S G ++A++
Sbjct: 245 ----FNRAHAWSQKEDYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIA 296
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 18 KTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSYEIQDI 72
K I + +E +R+D A A R ++ +++KAIR LD +Y
Sbjct: 429 KAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIR-LDPTNTWAY----- 482
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NR + + Q E + I D ++A+QLDP AY+ +G A+S ++A++
Sbjct: 483 FNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIA 534
>gi|167753497|ref|ZP_02425624.1| hypothetical protein ALIPUT_01771 [Alistipes putredinis DSM 17216]
gi|167658122|gb|EDS02252.1| tetratricopeptide repeat protein [Alistipes putredinis DSM 17216]
Length = 671
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ N A + F + ++P++ A I R R + A+ DF EAI P
Sbjct: 69 RGVAKFNLDDLLGADTDFSAAIVKNPVFTTAYIYRALTRTRMGNYDDALQDFREAIDLRP 128
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG R + EAI+D K + E AD RG KD A+E+
Sbjct: 129 DLPDAYYSRGYTRLQNKQYEEAIEDFDKFIFQENKVADAYIGRGTAYLYLKDTVRALENF 188
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ ++EN + Y G L EY +AE +I+ D FL + + Y +
Sbjct: 189 DQAIRTNRENPNGYYQRGTLLLQKEEYARAEADFDMSIRCDSAFLPPYFNRAVVYSNTNR 248
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+AL +VL +D S Y R +L +G + +A+ D P N++ YLRA
Sbjct: 249 PMQALADFDRVLQLDSTNSFTYFNRAILRTQIGDYNRALDDFDRVALYSPGNVQVYYLRA 308
Query: 627 SCYHAIGE 634
+G+
Sbjct: 309 MLKTRLGD 316
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG ++ +Y AI FD+ + ++ +A IGRGTA + ++ A+ +F +AI++N
Sbjct: 136 SRGYTRLQNKQYEEAIEDFDKFIFQENKVADAYIGRGTAYLYLKDTVRALENFDQAIRTN 195
Query: 446 PSAGEAWKRRGQ--------ARAA--------------------------LGESVEAIQD 471
+ +RG ARA ++A+ D
Sbjct: 196 RENPNGYYQRGTLLLQKEEYARAEADFDMSIRCDSAFLPPYFNRAVVYSNTNRPMQALAD 255
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ L+ + ++ R I+ + D+N A++D N Y + + +G
Sbjct: 256 FDRVLQLDSTNSFTYFNRAILRTQIGDYNRALDDFDRVALYSPGNVQVYYLRAMLKTRLG 315
Query: 532 EYKKAEEAHLKAIQLDRNFLEAW 554
+ + AE + +AI+L +F A+
Sbjct: 316 DLEGAERDYTRAIELYPDFANAY 338
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ D+ L+ P + EA RGT A +L A DF+ AI+ NP EA+ RG
Sbjct: 570 YDEAIADLDKTLRLFPNFAEAYYNRGTLLALSGKLPEAFEDFSRAIELNPLFAEAFYNRG 629
Query: 457 QARAALGESVEAIQDLSKALEFEPNSA 483
+ + ++ + DLSKA E SA
Sbjct: 630 MTQIYMKDTRKGCLDLSKAGELGITSA 656
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI+D + ++ P+ EA+ RG A G+ EA +D S+A+E P A+ + RG+
Sbjct: 573 AIADLDKTLRLFPNFAEAYYNRGTLLALSGKLPEAFEDFSRAIELNPLFAEAFYNRGMTQ 632
Query: 494 FKFKDFNAAVEDLSACVKL 512
KD DLS +L
Sbjct: 633 IYMKDTRKGCLDLSKAGEL 651
>gi|124023008|ref|YP_001017315.1| hypothetical protein P9303_13031 [Prochlorococcus marinus str. MIT
9303]
gi|123963294|gb|ABM78050.1| TPR repeat [Prochlorococcus marinus str. MIT 9303]
Length = 306
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 123/256 (48%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F G A+V Y AI+ + + + +P +A RG A++ + + AI+DF +AI
Sbjct: 20 FYKKSGNAKVRSEDYQGAIADYSKAIAINPKDADAYNNRGLAKSKSGDNQGAIADFNKAI 79
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP A+ RG A++ LG+ AI D ++A+E P RG+ + A
Sbjct: 80 EINPQDARAYNNRGLAKSKLGDYQGAIADYNRAIEINPVYLYGFLNRGLAKKNLNKYQEA 139
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + + ++ + +AY GLA + +Y+ A + KAI ++ A+ +
Sbjct: 140 IADYNNAIAINPQLAAAYNKRGLAKVDLKDYQGAIADYNKAIAINPKDAAAYNNRGAVKG 199
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+++ A+ + + ID +++ AY RGL + LG ++ AI D S + IDP ++
Sbjct: 200 KSGDNQGAVADFNKAIEIDLQYADAYINRGLTQYNLGDNQGAIADYSEAIQIDPQDVFAY 259
Query: 623 YLRASCYHAIGEYREA 638
R + +Y+ A
Sbjct: 260 NNRGYATWKLKDYQSA 275
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 128/262 (48%), Gaps = 9/262 (3%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASAISIFDQIL 408
K++ N R++ + SK+I++ D +RG+A+ G AI+ F++ +
Sbjct: 20 FYKKSGNAKVRSEDYQGAIADYSKAIAINPKDADAYNNRGLAKSKSGDNQGAIADFNKAI 79
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ +P A RG A++ + + AI+D+ AI+ NP + RG A+ L + EA
Sbjct: 80 EINPQDARAYNNRGLAKSKLGDYQGAIADYNRAIEINPVYLYGFLNRGLAKKNLNKYQEA 139
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I D + A+ P A ++RG+ KD+ A+ D + + ++ ++ +AY G
Sbjct: 140 IADYNNAIAINPQLAAAYNKRGLAKVDLKDYQGAIADYNKAIAINPKDAAAYNNRGAVKG 199
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSK 586
G+ + A KAI++D + +A+ + LTQ+ +L +++ A+ + + ID +
Sbjct: 200 KSGDNQGAVADFNKAIEIDLQYADAYINRGLTQY--NLGDNQGAIADYSEAIQIDPQDVF 257
Query: 587 AYHLRGLLLHGLGQHKKAIKDL 608
AY+ RG L ++ A D
Sbjct: 258 AYNNRGYATWKLKDYQSACNDF 279
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+A+ N KY AI+ ++ + +P A RG A+ ++ + AI+D+ +AI
Sbjct: 124 LNRGLAKKNLNKYQEAIADYNNAIAINPQLAAAYNKRGLAKVDLKDYQGAIADYNKAIAI 183
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG + G++ A+ D +KA+E + AD RG+ + D A+
Sbjct: 184 NPKDAAAYNNRGAVKGKSGDNQGAVADFNKAIEIDLQYADAYINRGLTQYNLGDNQGAIA 243
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D S +++D ++ AY G A + +Y+ A KA L W
Sbjct: 244 DYSEAIQIDPQDVFAYNNRGYATWKLKDYQSACNDFKKAASLGSQSTAQW 293
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+K+ G A+ + AI D SKA+ P AD + RG+ K D A+ D + ++
Sbjct: 21 YKKSGNAKVRSEDYQGAIADYSKAIAINPKDADAYNNRGLAKSKSGDNQGAIADFNKAIE 80
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
++ ++ AY GLA S +G+Y+ A + +AI+++ +L + + ++L ++A+
Sbjct: 81 INPQDARAYNNRGLAKSKLGDYQGAIADYNRAIEINPVYLYGFLNRGLAKKNLNKYQEAI 140
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+ I+ + + AY+ RGL L ++ AI D + + I+P + R +
Sbjct: 141 ADYNNAIAINPQLAAAYNKRGLAKVDLKDYQGAIADYNKAIAINPKDAAAYNNRGAVKGK 200
Query: 632 IGEYREAV 639
G+ + AV
Sbjct: 201 SGDNQGAV 208
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 64/135 (47%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
SA + G + +D+ A+ D S + ++ ++ AY GLA S G+ + A
Sbjct: 17 SAVFYKKSGNAKVRSEDYQGAIADYSKAIAINPKDADAYNNRGLAKSKSGDNQGAIADFN 76
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+++ A+ + L + + A+ + + I+ + + RGL L ++
Sbjct: 77 KAIEINPQDARAYNNRGLAKSKLGDYQGAIADYNRAIEINPVYLYGFLNRGLAKKNLNKY 136
Query: 602 KKAIKDLSSGLGIDP 616
++AI D ++ + I+P
Sbjct: 137 QEAIADYNNAIAINP 151
>gi|21228822|ref|NP_634744.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
gi|20907343|gb|AAM32416.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
Length = 1129
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 135/578 (23%), Positives = 246/578 (42%), Gaps = 71/578 (12%)
Query: 80 SQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
S+L +K ++ D+A+ LD A+ K A + +GR E+++ +++ E A SA+
Sbjct: 480 SKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALAKIGRYEDSIVCYDRVLEVA-PDSAE 538
Query: 140 L--KQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKM-----SETSENH 192
+ + L L+EL + + C S+ +V+ LN + +M + S N+
Sbjct: 539 IWYNKGLLLDEL---GRYQEASDCYSQALQINSNYSVARFRLNKDIEMLSGNLTSISANN 595
Query: 193 NKSDICDSSSQSRDV-SETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVS 251
++I + + S S PD I+G ++++S
Sbjct: 596 KNTNINPQKAITGGFWSYLLSYKYASPD-------------------DNTEISGSIKDLS 636
Query: 252 E--NHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHD 309
++ + G ST++ + E + S D + P+ + E+ D
Sbjct: 637 PEFGYDEAWYGKASTYSKLEMYE-DALHSYDMALAINPVRTEAWYEKGS--------ALD 687
Query: 310 KLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFC 369
KL +L E Y K+ D +SS++ W + TS++ R ++
Sbjct: 688 KLGRSEEAL-------ECYQKALDIDPQSSNA----------WYGMASTSSDLGRAEEAI 730
Query: 370 VTRISKSKSISVDFRLSRG--IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
K S D +G +A + G+Y A++ F+ +L+ +P EAL GR A A
Sbjct: 731 AYYDQLLKLNSTDSEALQGKSLALASLGRYDEAVACFNPLLELEPENVEALEGRAFALAR 790
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
EAA+ D+ ++ +P+ +A + LG EA + LE P + +I++
Sbjct: 791 SGRPEAALEDYDVIMKLDPTNSKALSEKASLLEELGRYDEAASTYGEILEITPENREIMY 850
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G DF AA+ + LD +N A G ALS + +Y++A + KA++ D
Sbjct: 851 RQGKALEAMGDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYD 910
Query: 548 RNFLEAWGHLTQFYQDLAN-----SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
+ AW +++ AN + ALEC + + + A++ +G L + LG
Sbjct: 911 PDNPAAW-----YFKGCANFAISSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVN 965
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
++I S L IDP + LY + ++ I EY EA +
Sbjct: 966 ESINSYESALEIDPDSPSALYNKRFSHYRIKEYDEASV 1003
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 116/245 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY +I+ +D ++ P+ E+ +G + AI+ + +++ ++ W ++
Sbjct: 111 KYEESIACYDMAIETFPVSSESWYKKGDEYLQTKNYIEAINCYEKSLATDNYLSRVWFQK 170
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A LG EA+ +++F NS+ L +G + +++ A+ + + + E
Sbjct: 171 ATASEKLGLDQEALTSYDTSIQFGTNSSKALQMQGKAYAQLENYEEAMNCFNRALNVTPE 230
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ + G+ G+Y+ A E + +AI L+ + +EAW + + + + AL C +
Sbjct: 231 DFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYNKGMDLERMEMYQDALTCYE 290
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
VL + A +GL L LG++++A++ L P N E Y + S +A+G+Y
Sbjct: 291 FVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQY 350
Query: 636 REAVI 640
A+I
Sbjct: 351 DAAII 355
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 126/280 (45%), Gaps = 15/280 (5%)
Query: 350 FKWDMLKETSN-EAKRNKKFCVTRISKSKSI-------------SVDFRLSRGIAQVNEG 395
+++ +L E N A + K C+ R+ +++ + + S+G G
Sbjct: 289 YEFVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMG 348
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y +AI +D+ L D G + + ++++ ++E + A + W +
Sbjct: 349 QYDAAIICYDRALNPDAGIEIQEAGDSLLESL-KVYDSSLPVYSEVPEFKSPAVKIWYDK 407
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG A++ +K LE EP+ A I +++G+ + AV +KLD
Sbjct: 408 GMAFDNLGNYESALECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSG 467
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ G S +G+YK A +++ +AI LD N+ AW + E ++ C
Sbjct: 468 YAKVWYKKGYDSSKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALAKIGRYEDSIVCYD 527
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+VL + ++ ++ +GLLL LG++++A S L I+
Sbjct: 528 RVLEVAPDSAEIWYNKGLLLDELGRYQEASDCYSQALQIN 567
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 122/294 (41%), Gaps = 35/294 (11%)
Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
DF L +GI G Y SAI +DQ + +P EA +G + A++ +
Sbjct: 231 DFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYNKGMDLERMEMYQDALTCYE 290
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ S P A +++G LG + EA+Q + L + P++ + + +G V +
Sbjct: 291 FVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQY 350
Query: 500 NAAV-------------------EDLSACVKLDKENKSAYTYL--------------GLA 526
+AA+ + L +K+ + Y+ + G+A
Sbjct: 351 DAAIICYDRALNPDAGIEIQEAGDSLLESLKVYDSSLPVYSEVPEFKSPAVKIWYDKGMA 410
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
++G Y+ A E + K ++ + + W L S +A+ C + L +D ++K
Sbjct: 411 FDNLGNYESALECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAK 470
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
++ +G LG++K A+K + +D + Y +A IG Y ++++
Sbjct: 471 VWYKKGYDSSKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALAKIGRYEDSIV 524
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 121/265 (45%), Gaps = 3/265 (1%)
Query: 378 SISVDFRLSRGIAQVN---EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
S + F + G A+ EG+ A S D++L + P E L+ +G +E E +
Sbjct: 22 SFTSGFLPAAGAAEAQKNLEGEEVPAASTRDEVLSQRPSSVEGLLTKGNDLYSLKEYELS 81
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I F +A++ P++ AW +G + +AL + E+I A+E P S++ +++G
Sbjct: 82 IGCFEKALEIEPNSSMAWYGKGCSLSALEKYEESIACYDMAIETFPVSSESWYKKGDEYL 141
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ K++ A+ + D + A +G ++A ++ +IQ N +A
Sbjct: 142 QTKNYIEAINCYEKSLATDNYLSRVWFQKATASEKLGLDQEALTSYDTSIQFGTNSSKAL 201
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ Y L N E+A+ C + L + + ++ +G++ G ++ AI+ + +
Sbjct: 202 QMQGKAYAQLENYEEAMNCFNRALNVTPEDFELWNQKGIMYDLSGDYESAIECYDQAISL 261
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
+P +E Y + + Y++A+
Sbjct: 262 NPDLVEAWYNKGMDLERMEMYQDAL 286
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 5/146 (3%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I ++D ++G A KY A++ +D+ L+ DP P A +G A
Sbjct: 868 CYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAWYFKGCANFAI 927
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
AA+ F + +Q P AW +G LG+ E+I ALE +P+S L+
Sbjct: 928 SSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVNESINSYESALEIDPDSPSALYN 987
Query: 489 RGIVNFKFKDFNAAVEDLSAC-VKLD 513
+ +++ K+++ A S C KLD
Sbjct: 988 KRFSHYRIKEYDEA----SVCKAKLD 1009
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 119/290 (41%), Gaps = 41/290 (14%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A Y A++ F++ L P E +G + E+AI + +AI NP
Sbjct: 204 QGKAYAQLENYEEAMNCFNRALNVTPEDFELWNQKGIMYDLSGDYESAIECYDQAISLNP 263
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEF----EPNSADILHERGIVNFKFKDFNAA 502
EAW +G E +E QD EF EP + L ++G+ + A
Sbjct: 264 DLVEAWYNKGMDL----ERMEMYQDALTCYEFVLLSEPENLSALQKKGLCLERLGRNEEA 319
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEY-------------------KKAEEAHLKA 543
++ + +N A+ G L+++G+Y ++A ++ L++
Sbjct: 320 LQCYDEILVYSPDNTEAWYSKGSVLNAMGQYDAAIICYDRALNPDAGIEIQEAGDSLLES 379
Query: 544 IQLDRNFLEAWGHLTQF--------------YQDLANSEKALECLQQVLYIDKRFSKAYH 589
+++ + L + + +F + +L N E ALEC +VL + + ++
Sbjct: 380 LKVYDSSLPVYSEVPEFKSPAVKIWYDKGMAFDNLGNYESALECYNKVLETEPDHAIIWY 439
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+GL L L + +A+ L +D + Y + +G+Y++AV
Sbjct: 440 QKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSSKLGKYKDAV 489
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 78/156 (50%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + +AI+ +D+IL DP +A+ +G A + + + A++ + +A++ +P AW
Sbjct: 860 GDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAWYF 919
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A A+ + A++ +K ++ +P+ + +G + D N ++ + +++D
Sbjct: 920 KGCANFAISSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVNESINSYESALEIDP 979
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ SA + I EY +A K LD +F
Sbjct: 980 DSPSALYNKRFSHYRIKEYDEASVCKAKLDSLDPDF 1015
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 119/256 (46%), Gaps = 9/256 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ G+ A+ +D+IL P EA +G+ + +AAI + A+ NP
Sbjct: 306 KGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQYDAAIICYDRAL--NP 363
Query: 447 SAGEAWKRRGQARAALGESVE----AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
AG + G + L ES++ ++ S+ EF+ + I +++G+ ++ +A
Sbjct: 364 DAGIEIQEAGDS---LLESLKVYDSSLPVYSEVPEFKSPAVKIWYDKGMAFDNLGNYESA 420
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E + ++ + ++ + GL L + + +A + KA++LD + + W
Sbjct: 421 LECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSS 480
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
L + A++ + + +D+ ++ A++ + L +G+++ +I L + P + E
Sbjct: 481 KLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALAKIGRYEDSIVCYDRVLEVAPDSAEIW 540
Query: 623 YLRASCYHAIGEYREA 638
Y + +G Y+EA
Sbjct: 541 YNKGLLLDELGRYQEA 556
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 8/195 (4%)
Query: 397 YASAISIFDQILKEDPMY--PEALIGRGTARAFQR--ELEAAISDFTEAIQSNPSAGEAW 452
Y S++ ++ ++ P + P I AF E+A+ + + +++ P W
Sbjct: 383 YDSSLPVYSEV----PEFKSPAVKIWYDKGMAFDNLGNYESALECYNKVLETEPDHAIIW 438
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++G L +S EA+ KAL+ + A + +++G + K + AV+ + L
Sbjct: 439 YQKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSSKLGKYKDAVKSYDEAIDL 498
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
D+ A+ AL+ IG Y+ + + + +++ + E W + +L ++A +
Sbjct: 499 DENYTLAWYGKAFALAKIGRYEDSIVCYDRVLEVAPDSAEIWYNKGLLLDELGRYQEASD 558
Query: 573 CLQQVLYIDKRFSKA 587
C Q L I+ +S A
Sbjct: 559 CYSQALQINSNYSVA 573
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
+A YS+LE+++ + D AL ++P +A+ KG A LGR EEAL ++K
Sbjct: 648 KASTYSKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGRSEEALECYQKA 702
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 46 LCSLRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L ++ ++ AI D +LA I I N+ F S++E ++ + DKAL+ DP
Sbjct: 856 LEAMGDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPA 915
Query: 105 AYILKGCAFSALGRKEEALSVWEK 128
A+ KGCA A+ AL + K
Sbjct: 916 AWYFKGCANFAISSNNAALECFNK 939
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE-IQD 71
L + + I D+L++++S + A+ + LA L SL + +A+ + LL E ++
Sbjct: 723 LGRAEEAIAYYDQLLKLNSTDSEALQGK-SLA-LASLGRYDEAVACFNPLLELEPENVEA 780
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
+ RAF ++ + + D D ++LDPT +A K LGR +EA S +
Sbjct: 781 LEGRAFALARSGRPEAALEDYDVIMKLDPTNSKALSEKASLLEELGRYDEAASTY 835
>gi|158341361|ref|YP_001522526.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017]
gi|158311602|gb|ABW33212.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017]
Length = 505
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 113/219 (51%), Gaps = 2/219 (0%)
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
Q N+ K +AI ++ + ++ + Y A RG R + + AI+DF +AIQ NP
Sbjct: 262 QQNDNK--AAIELYTRAIRLNADYANAYNNRGLLRQNFNDNKGAIADFEKAIQLNPDDSF 319
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ RG A + LG+ AI D SKA++ P +A + RGI ++ D A+ D +
Sbjct: 320 AYNNRGNALSELGDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGAIADFEKTI 379
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+L+ +N AY G ALS +G+ A + KAIQL+ ++ A+ + L++ A
Sbjct: 380 QLNPDNALAYNNRGNALSELGDLNGAIADYDKAIQLNPDYPGAYYNRGNTRFRLSDPNGA 439
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + + ++ + AY+ R ++ LG K AI D++
Sbjct: 440 ITDYDKAIQLNPDHAGAYYNRAIVRRSLGDRKGAIADMT 478
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G AI+ + + ++ +P+ A RG R + AI+DF + IQ N
Sbjct: 323 NRGNALSELGDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGAIADFEKTIQLN 382
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + LG+ AI D KA++ P+ + RG F+ D N A+ D
Sbjct: 383 PDNALAYNNRGNALSELGDLNGAIADYDKAIQLNPDYPGAYYNRGNTRFRLSDPNGAITD 442
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++L+ ++ AY + S+G+ K A +A QL
Sbjct: 443 YDKAIQLNPDHAGAYYNRAIVRRSLGDRKGAIADMTEAAQL 483
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q + +AAI +T AI+ N A+ RG R ++ AI D KA++ P+ + +
Sbjct: 263 QNDNKAAIELYTRAIRLNADYANAYNNRGLLRQNFNDNKGAIADFEKAIQLNPDDSFAYN 322
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG + D A+ D S ++L+ N AY G+ +G+ + A K IQL+
Sbjct: 323 NRGNALSELGDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGAIADFEKTIQLN 382
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ + +L + A+ + + ++ + AY+ RG L AI D
Sbjct: 383 PDNALAYNNRGNALSELGDLNGAIADYDKAIQLNPDYPGAYYNRGNTRFRLSDPNGAITD 442
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++P + Y RA ++G+ + A+
Sbjct: 443 YDKAIQLNPDHAGAYYNRAIVRRSLGDRKGAI 474
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
W + E + + NK + +++ ++ D+ + RG+ + N AI+ F++ +
Sbjct: 253 WFLRAEKARQQNDNKA-AIELYTRAIRLNADYANAYNNRGLLRQNFNDNKGAIADFEKAI 311
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ +P A RG A + + E AI+D+++AIQ NP A+ RG R LG++ A
Sbjct: 312 QLNPDDSFAYNNRGNALSELGDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGA 371
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I D K ++ P++A + RG + D N A+ D ++L+ + AY G
Sbjct: 372 IADFEKTIQLNPDNALAYNNRGNALSELGDLNGAIADYDKAIQLNPDYPGAYYNRGNTRF 431
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + A + KAIQL+ + A+
Sbjct: 432 RLSDPNGAITDYDKAIQLNPDHAGAY 457
>gi|254413092|ref|ZP_05026864.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180256|gb|EDX75248.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 1179
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 121/254 (47%), Gaps = 2/254 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A A + F Q+L+ +P + GRG A + + E AI F +AI+ N
Sbjct: 80 RGMAYRGLKLEEPATADFYQVLQREPHTYQDWRGRGLALSELKRYEEAIVSFDKAIEINS 139
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG A LG+ AI KALE P+ I RG+ + A+
Sbjct: 140 DYYYAWNGRGLALDELGKYENAIASYDKALEINPDDYKIWGNRGLALNNLGKYEDAIASY 199
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD-LA 565
++++ N A+ GLAL+++G+Y+ A ++ KAI+++ +W L F D L
Sbjct: 200 DKAIEINPNNYKAWGKRGLALNNLGKYEDAIASYDKAIEINPGEYGSW-ILRSFALDKLE 258
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+ + L Q L I+ A++ R + L LG+H++AI + I+P + +
Sbjct: 259 KYEEVVTSLDQALKINSHEYYAWNRRAIGLDKLGKHEEAIASYDKAIKINPDDYTAWRNK 318
Query: 626 ASCYHAIGEYREAV 639
H +G+Y EA+
Sbjct: 319 GFVLHKLGKYEEAI 332
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 118/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G GKY AIS DQ LK +P I RG A + A++ + +AIQ N
Sbjct: 317 NKGFVLHKLGKYEEAISSLDQALKINPDQYYFCILRGCALDKLGKYSEALASYNQAIQIN 376
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG+ EA+ ++ALE + + RG + A+
Sbjct: 377 PDDYTAWINRGSALDKLGKYSEALASYNQALEINSDEYSAWNLRGKTLNNLGKYEEAITS 436
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ ++ +A+ GLAL+ +G+Y+KA ++ KA++++ N W + +L
Sbjct: 437 FDKVIEINSDDYTAWVNRGLALNELGKYEKALASYDKALEINPNEYYTWNNQGNALFNLG 496
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
EKAL + L I+ + R +L LG++ + I + I+P R
Sbjct: 497 KYEKALASYDKALEINPDGYTVLNNRSGVLCNLGKYSEMITSCDQAIEINPDYYMAWSNR 556
Query: 626 ASCYHAIGEYREAV 639
+ +G+Y EA+
Sbjct: 557 GFGLYNLGQYEEAL 570
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 121/258 (46%), Gaps = 1/258 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D+R RG+A +Y AI FD+ ++ + Y A GRG A + E AI+ + +A
Sbjct: 110 DWR-GRGLALSELKRYEEAIVSFDKAIEINSDYYYAWNGRGLALDELGKYENAIASYDKA 168
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ NP + W RG A LG+ +AI KA+E PN+ +RG+ +
Sbjct: 169 LEINPDDYKIWGNRGLALNNLGKYEDAIASYDKAIEINPNNYKAWGKRGLALNNLGKYED 228
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ ++++ ++ AL + +Y++ + +A++++ + AW
Sbjct: 229 AIASYDKAIEINPGEYGSWILRSFALDKLEKYEEVVTSLDQALKINSHEYYAWNRRAIGL 288
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
L E+A+ + + I+ A+ +G +LH LG++++AI L L I+P
Sbjct: 289 DKLGKHEEAIASYDKAIKINPDDYTAWRNKGFVLHKLGKYEEAISSLDQALKINPDQYYF 348
Query: 622 LYLRASCYHAIGEYREAV 639
LR +G+Y EA+
Sbjct: 349 CILRGCALDKLGKYSEAL 366
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 118/255 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G Q++ G+ A+ IF Q + +P P+ L G G A + + ++ T+ +
Sbjct: 10 LQQGHEQLDRGQNQEALQIFQQAEQREPENPQVLFGLGLACYRLEQYQESVDYLTKTLDI 69
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG A L A D + L+ EP++ RG+ + K + A+
Sbjct: 70 EPCYILALAYRGMAYRGLKLEEPATADFYQVLQREPHTYQDWRGRGLALSELKRYEEAIV 129
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ + A+ GLAL +G+Y+ A ++ KA++++ + + WG+ +L
Sbjct: 130 SFDKAIEINSDYYYAWNGRGLALDELGKYENAIASYDKALEINPDDYKIWGNRGLALNNL 189
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E A+ + + I+ KA+ RGL L+ LG+++ AI + I+P L
Sbjct: 190 GKYEDAIASYDKAIEINPNNYKAWGKRGLALNNLGKYEDAIASYDKAIEINPGEYGSWIL 249
Query: 625 RASCYHAIGEYREAV 639
R+ + +Y E V
Sbjct: 250 RSFALDKLEKYEEVV 264
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A N GKY AI+ +D+ ++ +P + I R A + E ++ +A++ N
Sbjct: 216 RGLALNNLGKYEDAIASYDKAIEINPGEYGSWILRSFALDKLEKYEEVVTSLDQALKINS 275
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RR LG+ EAI KA++ P+ +G V K + A+ L
Sbjct: 276 HEYYAWNRRAIGLDKLGKHEEAIASYDKAIKINPDDYTAWRNKGFVLHKLGKYEEAISSL 335
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+K++ + G AL +G+Y +A ++ +AIQ++ + AW + L
Sbjct: 336 DQALKINPDQYYFCILRGCALDKLGKYSEALASYNQAIQINPDDYTAWINRGSALDKLGK 395
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+AL Q L I+ A++LRG L+ LG++++AI + I+ + R
Sbjct: 396 YSEALASYNQALEINSDEYSAWNLRGKTLNNLGKYEEAITSFDKVIEINSDDYTAWVNRG 455
Query: 627 SCYHAIGEYREAV 639
+ +G+Y +A+
Sbjct: 456 LALNELGKYEKAL 468
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 125/268 (46%), Gaps = 13/268 (4%)
Query: 362 AKRNKKFCVTRISKSK----------SISVD---FRLSRGIAQVNEGKYASAISIFDQIL 408
A RNK F + ++ K + I+ D F + RG A GKY+ A++ ++Q +
Sbjct: 314 AWRNKGFVLHKLGKYEEAISSLDQALKINPDQYYFCILRGCALDKLGKYSEALASYNQAI 373
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ +P A I RG+A + A++ + +A++ N AW RG+ LG+ EA
Sbjct: 374 QINPDDYTAWINRGSALDKLGKYSEALASYNQALEINSDEYSAWNLRGKTLNNLGKYEEA 433
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I K +E + RG+ + + A+ ++++ + G AL
Sbjct: 434 ITSFDKVIEINSDDYTAWVNRGLALNELGKYEKALASYDKALEINPNEYYTWNNQGNALF 493
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
++G+Y+KA ++ KA++++ + + + +L + + Q + I+ + A+
Sbjct: 494 NLGKYEKALASYDKALEINPDGYTVLNNRSGVLCNLGKYSEMITSCDQAIEINPDYYMAW 553
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
RG L+ LGQ+++A+ + + I+P
Sbjct: 554 SNRGFGLYNLGQYEEALASCNKAIEINP 581
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 87/168 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG N GKY AI+ FD++++ + A + RG A + E A++ + +A++ NP
Sbjct: 420 RGKTLNNLGKYEEAITSFDKVIEINSDDYTAWVNRGLALNELGKYEKALASYDKALEINP 479
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W +G A LG+ +A+ KALE P+ +L+ R V ++ +
Sbjct: 480 NEYYTWNNQGNALFNLGKYEKALASYDKALEINPDGYTVLNNRSGVLCNLGKYSEMITSC 539
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
++++ + A++ G L ++G+Y++A + KAI+++ ++ AW
Sbjct: 540 DQAIEINPDYYMAWSNRGFGLYNLGQYEEALASCNKAIEINPDYYMAW 587
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 8/257 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A GKY+ A++ ++Q L+ + A RG + E AI+ F + I+
Sbjct: 384 INRGSALDKLGKYSEALASYNQALEINSDEYSAWNLRGKTLNNLGKYEEAITSFDKVIEI 443
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N AW RG A LG+ +A+ KALE PN + +G F + A+
Sbjct: 444 NSDDYTAWVNRGLALNELGKYEKALASYDKALEINPNEYYTWNNQGNALFNLGKYEKALA 503
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ + + L ++G+Y + + +AI+++ ++ AW + +L
Sbjct: 504 SYDKALEINPDGYTVLNNRSGVLCNLGKYSEMITSCDQAIEINPDYYMAWSNRGFGLYNL 563
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG---LGID-PSNIE 620
E+AL + + I+ + A+ RG L L +++KA K+ G L +D P + E
Sbjct: 564 GQYEEALASCNKAIEINPDYYMAWSNRGWALFKLKRYQKAFKNWKDGIKNLNLDTPEHRE 623
Query: 621 ----CLYLRASCYHAIG 633
Y A Y+ +G
Sbjct: 624 GRSKLYYSEAQAYYQLG 640
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRI-LDSLLAQ 65
+L K + + +D+ ++++S A R I L KL ++ ++ KAI+I D A
Sbjct: 256 KLEKYEEVVTSLDQALKINSHEYYAWNRRAIGLDKLGKHEEAIASYDKAIKINPDDYTAW 315
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
N+ F +L ++ I D+AL+++P IL+GCA LG+ EAL+
Sbjct: 316 R-------NKGFVLHKLGKYEEAISSLDQALKINPDQYYFCILRGCALDKLGKYSEALAS 368
Query: 126 WEKG-------YEHALHQSADLKQFLELEELLTAAKQDRSVTC-EYDVSN----SMSSLT 173
+ + Y +++ + L + + E L + Q + EY N ++++L
Sbjct: 369 YNQAIQINPDDYTAWINRGSALDKLGKYSEALASYNQALEINSDEYSAWNLRGKTLNNLG 428
Query: 174 VSESGLNANDKMSETS 189
E + + DK+ E +
Sbjct: 429 KYEEAITSFDKVIEIN 444
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSY 67
++ + L K K + D+ + ++ + + R + LC+L +S+ I D Q+
Sbjct: 490 NALFNLGKYEKALASYDKALEINPDGYTVLNNRSGV--LCNLGKYSEMITSCD----QAI 543
Query: 68 EIQD-----ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
EI NR F L ++ + C+KA++++P A+ +G A L R ++A
Sbjct: 544 EINPDYYMAWSNRGFGLYNLGQYEEALASCNKAIEINPDYYMAWSNRGWALFKLKRYQKA 603
Query: 123 LSVWEKG 129
W+ G
Sbjct: 604 FKNWKDG 610
>gi|414079262|ref|YP_007000686.1| hypothetical protein ANA_C20172 [Anabaena sp. 90]
gi|413972541|gb|AFW96629.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 619
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + KY A S F Q ++ D Y EA R + A+ D +A++ +P
Sbjct: 360 RGRSYYELSKYEDAFSDFTQAIELDSDYVEAYGNRSAVSYRLKNYRKALQDSNKALKIDP 419
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S +A+ RGQAR L + AIQD +K++ F+P + RG+ ++ +D+ A+ED
Sbjct: 420 SCADAYLNRGQAREGLKQYKGAIQDYTKSISFDPGMVLAYNNRGLAKYEIEDYQGAIEDC 479
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KLD AY GLA+ I +Y +A + +AI+LD +++ + + L N
Sbjct: 480 TEALKLDPNCALAYNNRGLAMYEIKDYHRAIDDCNQAIKLDSKLAQSYYIRGKSHLGLRN 539
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
AL + Q + I+ ++AY +G + G+ K+AI+
Sbjct: 540 LGSALSDIDQAIQINPEIAEAYTDKGFIHLISGRKKEAIQ 579
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 11/251 (4%)
Query: 397 YASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS-------A 448
Y AI + I+ P +YP A RG A +AAI DF + I P
Sbjct: 229 YKEAIEFYTAIINIKPDLYP-AYHYRGYAYYLLDNYQAAIDDFRQIIHFKPHNLLTYLLL 287
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
+ ++ +AAL + AI L+ L+ E + + I N K ++ A+E+ +
Sbjct: 288 TSVFIKKLDYQAALEQCKIAII-LNNHLDKELDILIYIQCGWIFN-KIGNYEEAIENFNE 345
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+ + + Y G + + +Y+ A +AI+LD +++EA+G+ + L N
Sbjct: 346 AINCNNNDPQIYNMRGRSYYELSKYEDAFSDFTQAIELDSDYVEAYGNRSAVSYRLKNYR 405
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
KAL+ + L ID + AY RG GL Q+K AI+D + + DP + R
Sbjct: 406 KALQDSNKALKIDPSCADAYLNRGQAREGLKQYKGAIQDYTKSISFDPGMVLAYNNRGLA 465
Query: 629 YHAIGEYREAV 639
+ I +Y+ A+
Sbjct: 466 KYEIEDYQGAI 476
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A+ +Y AI + + + DP A RG A+ + + AI D TEA
Sbjct: 423 DAYLNRGQAREGLKQYKGAIQDYTKSISFDPGMVLAYNNRGLAKYEIEDYQGAIEDCTEA 482
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P+ A+ RG A + + AI D ++A++ + A + RG + ++ +
Sbjct: 483 LKLDPNCALAYNNRGLAMYEIKDYHRAIDDCNQAIKLDSKLAQSYYIRGKSHLGLRNLGS 542
Query: 502 AVEDLSACVKLDKENKSAYT 521
A+ D+ ++++ E AYT
Sbjct: 543 ALSDIDQAIQINPEIAEAYT 562
>gi|432111813|gb|ELK34856.1| Tetratricopeptide repeat protein 13 [Myotis davidii]
Length = 736
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 44/265 (16%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+ G Y AI F +L+E+P A+ GRG A
Sbjct: 53 IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYG------------------------- 87
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF----------------- 494
K+ + LG EA+ DL+KA++ +P SA + RG + F
Sbjct: 88 -KKGLHILSPLGRISEAVNDLTKAIQLQP-SARLYRHRGTLYFISEASPFCPEALPCAMR 145
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+D+ A ED + L++ A Y GL G K+A E+ +A++ +F++A+
Sbjct: 146 NTEDYATAHEDFQQSLALNRNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 205
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
L Q Y++L N E A E Q+ L +++ + LRGL+L+ G ++A+K+ L +
Sbjct: 206 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLQEALKNFKRCLQL 265
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
+P N C Y+R + A+G++ E +
Sbjct: 266 EPYNEVCQYMRGLSHVAMGQFYEGI 290
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A N YA+A F Q L + P A++ +G + L+ AI F EA++
Sbjct: 143 AMRNTEDYATAHEDFQQSLALNRNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFI 202
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+A+K GQA LG A + KAL N L RG++ + A+++ C
Sbjct: 203 DAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLQEALKNFKRC 262
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
++L+ N+ GL+ ++G++ + +A K +
Sbjct: 263 LQLEPYNEVCQYMRGLSHVAMGQFYEGIKAQTKVM 297
>gi|119492428|ref|ZP_01623749.1| serine/threonine kinase [Lyngbya sp. PCC 8106]
gi|119453094|gb|EAW34263.1| serine/threonine kinase [Lyngbya sp. PCC 8106]
Length = 724
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 124/249 (49%), Gaps = 4/249 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
++ I S+G+ ++ +G +A+ Q + + PEA RG A + +
Sbjct: 327 FNRPDPIKAQVAFSQGVEKLEKGNPKAAVRTLTQAINYNSDNPEAYHQRGNAYYDLEQYQ 386
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI D+T+AIQ NP+ A+ RG AR + AI D SK +E EP D ++RG+
Sbjct: 387 NAIEDYTQAIQLNPNYTNAYFNRGLARYDAQDLSGAIADYSKVIELEPTDVDAYYKRGLA 446
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFL 551
++ +D+ A+ED S +++ ++ AY G+A + G+ + + +AI+LD +N L
Sbjct: 447 HYALEDYQKAIEDYSEVIRIQSDHPLAYRSRGIARVNSGDLQGGLADYTQAIRLDSKNIL 506
Query: 552 EAWGH-LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ T+F+ L + + AL +V+ + S Y R L +H+ AI D +
Sbjct: 507 AYYDRGRTRFH--LGDYQGALADYDRVIELQPDNSFVYGNRCSTQINLSKHQAAIDDCTK 564
Query: 611 GLGIDPSNI 619
+ ++P+ +
Sbjct: 565 AIQLEPNAV 573
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 113/241 (46%), Gaps = 4/241 (1%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V RI ++ +R SRGIA+VN G ++ + Q ++ D A RG R
Sbjct: 463 VIRIQSDHPLA--YR-SRGIARVNSGDLQGGLADYTQAIRLDSKNILAYYDRGRTRFHLG 519
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + A++D+ I+ P + R + L + AI D +KA++ EPN+ + R
Sbjct: 520 DYQGALADYDRVIELQPDNSFVYGNRCSTQINLSKHQAAIDDCTKAIQLEPNAV-AYNNR 578
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + + A+ D + ++L + AY+ G+ + +++ A + KAI+L+ N
Sbjct: 579 CVAYLNISELDKALADCTKAIELTPTDHKAYSNRGMVQVAQQDFQAAIADYTKAIELNPN 638
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+++ + Y +L + +A+ Q + + + AY+ RG++ LG AI D
Sbjct: 639 DAQSYSNRATTYYELQDYNQAIADYVQAIRLKPDYPNAYYGRGIVRVALGDKSGAINDFR 698
Query: 610 S 610
+
Sbjct: 699 T 699
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 105/218 (48%), Gaps = 3/218 (1%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I +F+ + DP+ + +G + + +AA+ T+AI N EA+ +RG A
Sbjct: 324 IKVFN---RPDPIKAQVAFSQGVEKLEKGNPKAAVRTLTQAINYNSDNPEAYHQRGNAYY 380
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
L + AI+D ++A++ PN + RG+ + +D + A+ D S ++L+ + AY
Sbjct: 381 DLEQYQNAIEDYTQAIQLNPNYTNAYFNRGLARYDAQDLSGAIADYSKVIELEPTDVDAY 440
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GLA ++ +Y+KA E + + I++ + A+ + + + L Q + +
Sbjct: 441 YKRGLAHYALEDYQKAIEDYSEVIRIQSDHPLAYRSRGIARVNSGDLQGGLADYTQAIRL 500
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
D + AY+ RG LG ++ A+ D + + P N
Sbjct: 501 DSKNILAYYDRGRTRFHLGDYQGALADYDRVIELQPDN 538
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 66/127 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A +N + A++ + ++ P +A RG + Q++ +AAI+D+T+AI+ N
Sbjct: 577 NRCVAYLNISELDKALADCTKAIELTPTDHKAYSNRGMVQVAQQDFQAAIADYTKAIELN 636
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +++ R L + +AI D +A+ +P+ + + RGIV D + A+ D
Sbjct: 637 PNDAQSYSNRATTYYELQDYNQAIADYVQAIRLKPDYPNAYYGRGIVRVALGDKSGAIND 696
Query: 506 LSACVKL 512
+L
Sbjct: 697 FRTAGQL 703
>gi|428311393|ref|YP_007122370.1| hypothetical protein Mic7113_3225 [Microcoleus sp. PCC 7113]
gi|428253005|gb|AFZ18964.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 496
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 118/239 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G+ + + G Y AI F+Q L+ + + E RG +R + + AI+D+++ ++
Sbjct: 68 FKQGLNKFHRGDYRGAIQDFNQALRFNADFAEVYYYRGMSRYKKGDYLGAINDYSQVLRV 127
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP EA+ RG RA L + A+QD ++AL+ + R + + D+ A+
Sbjct: 128 NPHNAEAYSERGFVRAVLADRWGAMQDYNQALQIDAKHIKTYLNRIPLRVELADYQEAIA 187
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D +A + ++ AY Y G+A + +Y A E + +A+ ++ N E + + L
Sbjct: 188 DCNAALNINPNLPKAYLYRGMAHFELEDYPNAMEDYNQALNINPNLAEGYFNRGLNRIGL 247
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ ++A+ Q L ++ +++AY RG LG + +++D L +DP + + +
Sbjct: 248 GDYQEAIADFNQALKLNPNYTQAYLNRGYTRLQLGDNWGSLEDFDQALHLDPVSAKAFF 306
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 130/279 (46%), Gaps = 26/279 (9%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+++ +G Y AI+ + Q+L+ +P EA RG RA + A+ D+ +A+Q +
Sbjct: 104 RGMSRYKKGDYLGAINDYSQVLRVNPHNAEAYSERGFVRAVLADRWGAMQDYNQALQIDA 163
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + R R L + EAI D + AL PN RG+ +F+ +D+ A+ED
Sbjct: 164 KHIKTYLNRIPLRVELADYQEAIADCNAALNINPNLPKAYLYRGMAHFELEDYPNAMEDY 223
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ Y GL +G+Y++A +A++L+ N+ +A+ + L +
Sbjct: 224 NQALNINPNLAEGYFNRGLNRIGLGDYQEAIADFNQALKLNPNYTQAYLNRGYTRLQLGD 283
Query: 567 SEKALECLQQVLYIDKRFSKAYH---------------------LRGLLLHG-----LGQ 600
+ +LE Q L++D +KA+ ++GL+L G G
Sbjct: 284 NWGSLEDFDQALHLDPVSAKAFFSQMAPAFSQELGIVEDENQQLIQGLMLQGNLRYDSGD 343
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ A+ + L +DP+ E R++ A+ +Y A+
Sbjct: 344 YHAALNAFNQVLNLDPNYTEAYNRRSTVRSALRDYEGAL 382
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 127/288 (44%), Gaps = 32/288 (11%)
Query: 324 NSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF 383
N+E+YS+ R+ L+ +W +++ + + + K T
Sbjct: 131 NAEAYSERGFV----------RAVLADRWGAMQDYNQALQIDAKHIKTY----------- 169
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
L+R +V Y AI+ + L +P P+A + RG A + A+ D+ +A+
Sbjct: 170 -LNRIPLRVELADYQEAIADCNAALNINPNLPKAYLYRGMAHFELEDYPNAMEDYNQALN 228
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP+ E + RG R LG+ EAI D ++AL+ PN RG + D ++
Sbjct: 229 INPNLAEGYFNRGLNRIGLGDYQEAIADFNQALKLNPNYTQAYLNRGYTRLQLGDNWGSL 288
Query: 504 EDLSACVKLDKEN-KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
ED + LD + K+ ++ + A S E E+ + + IQ L G+L
Sbjct: 289 EDFDQALHLDPVSAKAFFSQMAPAFSQ--ELGIVEDENQQLIQ----GLMLQGNLR---Y 339
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
D + AL QVL +D +++AY+ R + L ++ A++DL +
Sbjct: 340 DSGDYHAALNAFNQVLNLDPNYTEAYNRRSTVRSALRDYEGALEDLET 387
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 100/192 (52%), Gaps = 1/192 (0%)
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A E++K+ G + G+ AIQD ++AL F + A++ + RG+ +K D+ A+ D S
Sbjct: 64 ASESFKQ-GLNKFHRGDYRGAIQDFNQALRFNADFAEVYYYRGMSRYKKGDYLGAINDYS 122
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++++ N AY+ G + + + A + + +A+Q+D ++ + + +LA+
Sbjct: 123 QVLRVNPHNAEAYSERGFVRAVLADRWGAMQDYNQALQIDAKHIKTYLNRIPLRVELADY 182
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
++A+ L I+ KAY RG+ L + A++D + L I+P+ E + R
Sbjct: 183 QEAIADCNAALNINPNLPKAYLYRGMAHFELEDYPNAMEDYNQALNINPNLAEGYFNRGL 242
Query: 628 CYHAIGEYREAV 639
+G+Y+EA+
Sbjct: 243 NRIGLGDYQEAI 254
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 41/267 (15%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+A Y +A+ ++Q L +P E RG R + + AI+DF +A++
Sbjct: 204 LYRGMAHFELEDYPNAMEDYNQALNINPNLAEGYFNRGLNRIGLGDYQEAIADFNQALKL 263
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL---------HERGIV--- 492
NP+ +A+ RG R LG++ +++D +AL +P SA E GIV
Sbjct: 264 NPNYTQAYLNRGYTRLQLGDNWGSLEDFDQALHLDPVSAKAFFSQMAPAFSQELGIVEDE 323
Query: 493 ------------NFKFK--DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
N ++ D++AA+ + + LD AY S++ +Y+ A E
Sbjct: 324 NQQLIQGLMLQGNLRYDSGDYHAALNAFNQVLNLDPNYTEAYNRRSTVRSALRDYEGALE 383
Query: 539 ----------AHLKAIQLDRNFLEAWGHLTQFYQ-----DLANSEKALECLQQVLYIDKR 583
+H ++Q ++Q + + + A+ QVL ++
Sbjct: 384 DLETAKNLSLSHQPSLQPPPVVPVGQTAKDYYHQGVEKLQIGDFQGAIADFNQVLQMNGN 443
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ RG +G +KAI+DL +
Sbjct: 444 DATTLTCRGFAYSRVGDKEKAIEDLQT 470
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA--- 441
+ +G + + G Y +A++ F+Q+L DP Y EA R T R+ R+ E A+ D A
Sbjct: 332 MLQGNLRYDSGDYHAALNAFNQVLNLDPNYTEAYNRRSTVRSALRDYEGALEDLETAKNL 391
Query: 442 -------IQSNP--SAGEAWK---RRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+Q P G+ K +G + +G+ AI D ++ L+ N A L R
Sbjct: 392 SLSHQPSLQPPPVVPVGQTAKDYYHQGVEKLQIGDFQGAIADFNQVLQMNGNDATTLTCR 451
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKE 515
G + D A+EDL KL E
Sbjct: 452 GFAYSRVGDKEKAIEDLQTAAKLFHE 477
>gi|86606961|ref|YP_475724.1| TPR repeat- and protein kinase domain-containing protein
[Synechococcus sp. JA-3-3Ab]
gi|86555503|gb|ABD00461.1| protein kinase domain/TPR repeat protein [Synechococcus sp.
JA-3-3Ab]
Length = 952
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 115/222 (51%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ RG +A Q +L+ AI+D+T AIQ +P G A +RG R G+ A++D ++A++
Sbjct: 301 LVTRGQEKARQGDLQGAIADYTLAIQLDPQNGRAHSQRGSVRYKTGDWAGAVEDFTRAIQ 360
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
A RGI ++ ++ AV D + ++LD AY G A + + ++A
Sbjct: 361 LGGGDARTYFNRGIARYRLGNYEGAVADYTHALRLDPHWALAYYSRGNAYRQLDQPQQAI 420
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
E + +A++L+ + A+ + L +++ A+ +VL D + ++AY RG+
Sbjct: 421 EDYSRALELNPEEVRAYFNRGVVRGQLGDAQGAVADFSEVLRRDPQDTEAYFNRGVARAQ 480
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + AI+D + L +DP + + Y R A+G+ + A+
Sbjct: 481 LLDFQGAIEDYTQALQLDPGHPKACYRRGLARQALGDLQGAI 522
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 14/267 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ G A A++ F++ L+ DP +A + RG A LEAA++D +AI +
Sbjct: 588 RGLARQGLGDPAGALADFNRALELDPRLAKAYLKRGIAHLELGHLEAALADLNQAIALDA 647
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S A RGQ LG+ + A+QD + ALE +P + + +RG + F+ +D+ AA ED
Sbjct: 648 SDVGARSSRGQVHRLLGDPLAALQDYTAALERDPRNPQLYFDRGQIYFEQEDWAAACEDF 707
Query: 507 SACVKLDKENKSA---------YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
S ++ + + Y G+A + +++ A IQ + +
Sbjct: 708 SQALQWAGQPGGPHGLDLMARIHLYRGMARQRLEDWQGALADFTALIQEQPQASQGFALR 767
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRF-----SKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ L + E AL L + + ++ + + AY RG L + ++AI D + L
Sbjct: 768 AAVHLVLGDEEAALADLDRAIGCNRDWGLADAALAYRQRGDLHRQANRLQQAIADYTQVL 827
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAV 639
++P L RA + GE A+
Sbjct: 828 ALNPQERHALLWRALLWDQAGEIERAL 854
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G AI+ + ++ DP A RG+ R + A+ DFT AIQ
Sbjct: 302 VTRGQEKARQGDLQGAIADYTLAIQLDPQNGRAHSQRGSVRYKTGDWAGAVEDFTRAIQL 361
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ RG AR LG A+ D + AL +P+ A + RG + A+E
Sbjct: 362 GGGDARTYFNRGIARYRLGNYEGAVADYTHALRLDPHWALAYYSRGNAYRQLDQPQQAIE 421
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S ++L+ E AY G+ +G+ + A + ++ D EA+ + L
Sbjct: 422 DYSRALELNPEEVRAYFNRGVVRGQLGDAQGAVADFSEVLRRDPQDTEAYFNRGVARAQL 481
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + A+E Q L +D KA + RGL LG + AI D S + +
Sbjct: 482 LDFQGAIEDYTQALQLDPGHPKACYRRGLARQALGDLQGAITDFSQAIAL 531
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 121/305 (39%), Gaps = 55/305 (18%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI-- 442
+RG+A+ + AI + Q L+ DP +P+A RG AR +L+ AI+DF++AI
Sbjct: 472 FNRGVARAQLLDFQGAIEDYTQALQLDPGHPKACYRRGLARQALGDLQGAITDFSQAIAL 531
Query: 443 --------------------------------------------QSNPSAGEAWKRRGQA 458
+ NP+ A RG A
Sbjct: 532 RATQGEEPSGAVAAAQAELYLQRAVAYLSNNALEAALADCEQALRLNPALALAHFYRGLA 591
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
R LG+ A+ D ++ALE +P A +RGI + + AA+ DL+ + LD +
Sbjct: 592 RQGLGDPAGALADFNRALELDPRLAKAYLKRGIAHLELGHLEAALADLNQAIALDASDVG 651
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
A + G +G+ A + + A++ D + + Q Y + + A E Q L
Sbjct: 652 ARSSRGQVHRLLGDPLAALQDYTAALERDPRNPQLYFDRGQIYFEQEDWAAACEDFSQAL 711
Query: 579 YIDKRFSKAYHL---------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
+ + L RG+ L + A+ D ++ + P + LRA+ +
Sbjct: 712 QWAGQPGGPHGLDLMARIHLYRGMARQRLEDWQGALADFTALIQEQPQASQGFALRAAVH 771
Query: 630 HAIGE 634
+G+
Sbjct: 772 LVLGD 776
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 41/271 (15%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V R SRG G +A+ + L+ DP P+ RG Q + AA DF++
Sbjct: 650 VGARSSRGQVHRLLGDPLAALQDYTAALERDPRNPQLYFDRGQIYFEQEDWAAACEDFSQ 709
Query: 441 AIQ-----SNPSAGEAWKR----RGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+Q P + R RG AR L + A+ D + ++ +P ++ R
Sbjct: 710 ALQWAGQPGGPHGLDLMARIHLYRGMARQRLEDWQGALADFTALIQEQPQASQGFALRAA 769
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V+ D AA+ DL + +++ GLA +++ Y++ + H +A +L
Sbjct: 770 VHLVLGDEEAALADLDRAIGCNRD-------WGLADAALA-YRQRGDLHRQANRL----- 816
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
++A+ QVL ++ + A R LL G+ ++A+ D +
Sbjct: 817 ----------------QQAIADYTQVLALNPQERHALLWRALLWDQAGEIERALADYTQL 860
Query: 612 LGIDP---SNIECLYLRASCYHAIGEYREAV 639
L ++P + + L R Y G++ A+
Sbjct: 861 LQLEPDPQTRLWALNNRGWAYAQQGDFAAAI 891
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD---ILH 487
L+ AI+D+T+ + NP A R GE A+ D ++ L+ EP+ L+
Sbjct: 816 LQQAIADYTQVLALNPQERHALLWRALLWDQAGEIERALADYTQLLQLEPDPQTRLWALN 875
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
RG + DF AA+ D + ++ D + A+ LA +++G+++ A + A+QL
Sbjct: 876 NRGWAYAQQGDFAAAIRDYTQVLERDPSHIKAHCNRALARAAVGDWQGACQDFQTALQL 934
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPE----ALIGRGTARAFQRELEAAISDFTE 440
L R + G+ A++ + Q+L+ +P P+ AL RG A A Q + AAI D+T+
Sbjct: 838 LWRALLWDQAGEIERALADYTQLLQLEPD-PQTRLWALNNRGWAYAQQGDFAAAIRDYTQ 896
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
++ +PS +A R ARAA+G+ A QD AL+ +
Sbjct: 897 VLERDPSHIKAHCNRALARAAVGDWQGACQDFQTALQLQ 935
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + AI+ + Q+L +P AL+ R E+E A++D+T+ +Q P
Sbjct: 806 RGDLHRQANRLQQAIADYTQVLALNPQERHALLWRALLWDQAGEIERALADYTQLLQLEP 865
Query: 447 SAGE---AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
A RG A A G+ AI+D ++ LE +P+ R + D+ A
Sbjct: 866 DPQTRLWALNNRGWAYAQQGDFAAAIRDYTQVLERDPSHIKAHCNRALARAAVGDWQGAC 925
Query: 504 EDLSACVKL 512
+D ++L
Sbjct: 926 QDFQTALQL 934
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +G +A+AI + Q+L+ DP + +A R ARA + + A DF A+Q
Sbjct: 876 NRGWAYAQQGDFAAAIRDYTQVLERDPSHIKAHCNRALARAAVGDWQGACQDFQTALQLQ 935
Query: 446 PSAGEAWK 453
G W+
Sbjct: 936 GYEGRLWE 943
>gi|313204456|ref|YP_004043113.1| hypothetical protein Palpr_1991 [Paludibacter propionicigenes WB4]
gi|312443772|gb|ADQ80128.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
propionicigenes WB4]
Length = 301
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S +F +G+ N Y +AI F + ++ +P +A + RG A+ + ++ I D
Sbjct: 20 SANFYFDKGVTAYNNRDYKTAIENFTRSIQINPRNIKAYVSRGIAKYYIQDYIGGIEDQH 79
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A++ NP+ G+A+ G L + AI++ SKA+E P RG DF
Sbjct: 80 KALEINPTYGDAYFNIGDCEYNLQDYTAAIENYSKAIELNPKDIMAYMSRGFTKQYINDF 139
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------------- 546
AV D S +KL YT G A S + ++K A + + KAIQ+
Sbjct: 140 AGAVSDFSIVIKLKPNLADGYTNRGFAKSYLEDFKGAIDDYTKAIQMNGSADAYFDRGKA 199
Query: 547 --------------DRNFLEAWGHLTQFYQ------DLANSEKALECLQQVLYIDKRFSK 586
++ E H Y L +++ ALE + L ID R++
Sbjct: 200 KEALNDHKGALSDFNKALRENAKHTKALYNRALTKISLQDTDGALEDFDKALEIDPRYAD 259
Query: 587 AYHLRGLLLHGLGQHKKAIKDL--SSGLG 613
A++ RG+L +GQ + +DL +SGLG
Sbjct: 260 AFYERGMLKIKVGQKEAGFQDLKAASGLG 288
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 35/165 (21%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+SRG + +A A+S F ++K P + RG A+++ + + AI D+T+AIQ
Sbjct: 127 MSRGFTKQYINDFAGAVSDFSIVIKLKPNLADGYTNRGFAKSYLEDFKGAIDDYTKAIQM 186
Query: 445 NPSAGEAWKRRGQARAALGE----------------------------------SVEAIQ 470
N SA +A+ RG+A+ AL + + A++
Sbjct: 187 NGSA-DAYFDRGKAKEALNDHKGALSDFNKALRENAKHTKALYNRALTKISLQDTDGALE 245
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
D KALE +P AD +ERG++ K A +DL A L E
Sbjct: 246 DFDKALEIDPRYADAFYERGMLKIKVGQKEAGFQDLKAASGLGHE 290
>gi|254412549|ref|ZP_05026323.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180859|gb|EDX75849.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 884
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 121/255 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G+ I+ FD+ L+ +A RG A +LE AI+ + +A+Q
Sbjct: 555 NRGNALFDLGRLEEGIASFDKALQFKRDCHQAWNNRGIALKKLGQLEEAIASYDKALQFK 614
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG+ EAI KAL+F+P+ + + RGI A+
Sbjct: 615 PDLHQAWNNRGNALFNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAIAS 674
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++ A+ G+AL ++G+ ++A ++ A+Q + EAW + L
Sbjct: 675 YDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDNALQFKSDDPEAWYNRGNALDGLG 734
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ + L I + +A + RG+ LG+ ++AI + L + E Y R
Sbjct: 735 QLKEAIASYDKALQIKPDYHQARYNRGIARRKLGRIEEAIASYDNALKFKTDDHEAWYNR 794
Query: 626 ASCYHAIGEYREAVI 640
+ +G + EA+I
Sbjct: 795 GFALYKLGRFEEAII 809
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G+ AI+ FD+ L+ +A RG A LE I+ F +A+Q
Sbjct: 521 NRGIALRKLGQLEEAITCFDKALQFKLDDHQAWYNRGNALFDLGRLEEGIASFDKALQFK 580
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+AW RG A LG+ EAI KAL+F+P+ + RG F A+
Sbjct: 581 RDCHQAWNNRGIALKKLGQLEEAIASYDKALQFKPDLHQAWNNRGNALFNLGQLEEAIAS 640
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++ A+ G+AL ++G+ ++A ++ KA+Q + EAW +L
Sbjct: 641 YDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLG 700
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ L +A++ RG L GLGQ K+AI L I P + Y R
Sbjct: 701 QLEEAIASYDNALQFKSDDPEAWYNRGNALDGLGQLKEAIASYDKALQIKPDYHQARYNR 760
Query: 626 ASCYHAIGEYREAV 639
+G EA+
Sbjct: 761 GIARRKLGRIEEAI 774
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 120/278 (43%), Gaps = 24/278 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G+ AI+ FD+ L+ P EA RG+A +E AI+ F +A+Q
Sbjct: 429 NRGIALRKLGRLEEAIASFDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQFK 488
Query: 446 P------------------------SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
P S +AW RG A LG+ EAI KAL+F+ +
Sbjct: 489 PDYHQAWYNRGIALDKLGRIEEAIASYDQAWYNRGIALRKLGQLEEAITCFDKALQFKLD 548
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ RG F + ++ ++ A+ G+AL +G+ ++A ++
Sbjct: 549 DHQAWYNRGNALFDLGRLEEGIASFDKALQFKRDCHQAWNNRGIALKKLGQLEEAIASYD 608
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KA+Q + +AW + +L E+A+ + L +A++ RG+ L LGQ
Sbjct: 609 KALQFKPDLHQAWNNRGNALFNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQL 668
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++AI L P + E Y R +G+ EA+
Sbjct: 669 EEAIASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAI 706
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G+ AI+ +D+ L+ P +A RG A +LE AI+ + +A+Q
Sbjct: 589 NRGIALKKLGQLEEAIASYDKALQFKPDLHQAWNNRGNALFNLGQLEEAIASYDKALQFK 648
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG+ EAI KAL+F+P+ + + RGI A+
Sbjct: 649 PDDPEAWYSRGIALGNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAIAS 708
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++ A+ G AL +G+ K+A ++ KA+Q+ ++ +A + + L
Sbjct: 709 YDNALQFKSDDPEAWYNRGNALDGLGQLKEAIASYDKALQIKPDYHQARYNRGIARRKLG 768
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ L +A++ RG L+ LG+ ++AI + L I Y +
Sbjct: 769 RIEEAIASYDNALKFKTDDHEAWYNRGFALYKLGRFEEAIISCNKALEIKLDYANAFYKK 828
Query: 626 ASCYHAI 632
A CY A+
Sbjct: 829 A-CYLAL 834
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 10/255 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L R IA G+ AI+ +D+ L+ +P +A RG A LE AI+ F +A+Q
Sbjct: 394 LDRSIALRKLGRLEEAIASYDKALQFEPDDHQACYNRGIALRKLGRLEEAIASFDKALQF 453
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW RG A LG EAI KAL+F+P+ + RGI A++
Sbjct: 454 KPDKHEAWYNRGSALDELGRIEEAIASFDKALQFKPDYHQAWYNRGI----------ALD 503
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
L + A+ G+AL +G+ ++A KA+Q + +AW + DL
Sbjct: 504 KLGRIEEAIASYDQAWYNRGIALRKLGQLEEAITCFDKALQFKLDDHQAWYNRGNALFDL 563
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+ + + L + +A++ RG+ L LGQ ++AI L P +
Sbjct: 564 GRLEEGIASFDKALQFKRDCHQAWNNRGIALKKLGQLEEAIASYDKALQFKPDLHQAWNN 623
Query: 625 RASCYHAIGEYREAV 639
R + +G+ EA+
Sbjct: 624 RGNALFNLGQLEEAI 638
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 112/254 (44%), Gaps = 10/254 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +Q G+ AI+ +D+ L+ P Y +A RG A LE AI+ + A+Q
Sbjct: 327 NRGNSQSKLGRLFKAIASYDKALQFKPDYHQAWYNRGIALRKLGRLEEAIASYDNALQFK 386
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W R A LG EAI KAL+FEP+ + RGI K A+
Sbjct: 387 PEQHEVWLDRSIALRKLGRLEEAIASYDKALQFEPDDHQACYNRGIALRKLGRLEEAIAS 446
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G AL +G ++A + KA+Q ++ +AW
Sbjct: 447 FDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQFKPDYHQAW----------Y 496
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N AL+ L ++ + +A++ RG+ L LGQ ++AI L + + Y R
Sbjct: 497 NRGIALDKLGRIEEAIASYDQAWYNRGIALRKLGQLEEAITCFDKALQFKLDDHQAWYNR 556
Query: 626 ASCYHAIGEYREAV 639
+ +G E +
Sbjct: 557 GNALFDLGRLEEGI 570
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 115/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+ AI+ +D+ L+ P E RG A E+E AI+ F +A+Q
Sbjct: 259 NRGNALFNLGRIEEAIASYDKALQFKPDDYETWCNRGYAMDELGEIEEAIASFEQALQFK 318
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+AWK RG +++ LG +AI KAL+F+P+ + RGI K A+
Sbjct: 319 RDCHQAWKNRGNSQSKLGRLFKAIASYDKALQFKPDYHQAWYNRGIALRKLGRLEEAIAS 378
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ E + +AL +G ++A ++ KA+Q + + +A + + L
Sbjct: 379 YDNALQFKPEQHEVWLDRSIALRKLGRLEEAIASYDKALQFEPDDHQACYNRGIALRKLG 438
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + L +A++ RG L LG+ ++AI L P + Y R
Sbjct: 439 RLEEAIASFDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQFKPDYHQAWYNR 498
Query: 626 ASCYHAIGEYREAV 639
+G EA+
Sbjct: 499 GIALDKLGRIEEAI 512
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 111/254 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AI+ FD+ L+ +A RG A +E AI+ + +A+Q
Sbjct: 225 NRGIALRNLGRIEEAIASFDKALQFKRDCHQAWNNRGNALFNLGRIEEAIASYDKALQFK 284
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W RG A LGE EAI +AL+F+ + RG K A+
Sbjct: 285 PDDYETWCNRGYAMDELGEIEEAIASFEQALQFKRDCHQAWKNRGNSQSKLGRLFKAIAS 344
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G+AL +G ++A ++ A+Q E W + + L
Sbjct: 345 YDKALQFKPDYHQAWYNRGIALRKLGRLEEAIASYDNALQFKPEQHEVWLDRSIALRKLG 404
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ + L + +A + RG+ L LG+ ++AI L P E Y R
Sbjct: 405 RLEEAIASYDKALQFEPDDHQACYNRGIALRKLGRLEEAIASFDKALQFKPDKHEAWYNR 464
Query: 626 ASCYHAIGEYREAV 639
S +G EA+
Sbjct: 465 GSALDELGRIEEAI 478
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRGIA N G+ AI+ +D+ L+ P PEA RG A +LE AI+ + A+Q
Sbjct: 657 SRGIALGNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDNALQFK 716
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EAW RG A LG+ EAI KAL+ +P+ + RGI K A+
Sbjct: 717 SDDPEAWYNRGNALDGLGQLKEAIASYDKALQIKPDYHQARYNRGIARRKLGRIEEAIAS 776
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K ++ A+ G AL +G +++A + KA+++ ++ A+ + Y L
Sbjct: 777 YDNALKFKTDDHEAWYNRGFALYKLGRFEEAIISCNKALEIKLDYANAF-YKKACYLALQ 835
Query: 566 NS-EKALECLQQVLYID 581
N + ALE LQQ + ++
Sbjct: 836 NQIDLALEKLQQAITLN 852
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 110/258 (42%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+F L +G Q G AI +++ L P A RG A +E AI+ F +A
Sbjct: 187 EFWLKQGNQQFRLGDLVDAIVCWEKALDITPDSHNAWNNRGIALRNLGRIEEAIASFDKA 246
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+Q +AW RG A LG EAI KAL+F+P+ + RG + +
Sbjct: 247 LQFKRDCHQAWNNRGNALFNLGRIEEAIASYDKALQFKPDDYETWCNRGYAMDELGEIEE 306
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ ++ ++ A+ G + S +G KA ++ KA+Q ++ +AW +
Sbjct: 307 AIASFEQALQFKRDCHQAWKNRGNSQSKLGRLFKAIASYDKALQFKPDYHQAWYNRGIAL 366
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ L E+A+ L + + R + L LG+ ++AI L +P + +
Sbjct: 367 RKLGRLEEAIASYDNALQFKPEQHEVWLDRSIALRKLGRLEEAIASYDKALQFEPDDHQA 426
Query: 622 LYLRASCYHAIGEYREAV 639
Y R +G EA+
Sbjct: 427 CYNRGIALRKLGRLEEAI 444
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+ AI+ +D+ L+ P PEA RG A +LE AI+ + +A+Q
Sbjct: 623 NRGNALFNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDKALQFK 682
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG+ EAI AL+F+ + + + RG A+
Sbjct: 683 PDDPEAWYSRGIALGNLGQLEEAIASYDNALQFKSDDPEAWYNRGNALDGLGQLKEAIAS 742
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A G+A +G ++A ++ A++ + EAW + L
Sbjct: 743 YDKALQIKPDYHQARYNRGIARRKLGRIEEAIASYDNALKFKTDDHEAWYNRGFALYKLG 802
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
E+A+ + L I ++ A++ + L Q A++ L + ++P
Sbjct: 803 RFEEAIISCNKALEIKLDYANAFYKKACYLALQNQIDLALEKLQQAITLNP 853
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+ AI+ +D+ L+ P Y +A RG AR +E AI+ + A++
Sbjct: 725 NRGNALDGLGQLKEAIASYDKALQIKPDYHQARYNRGIARRKLGRIEEAIASYDNALKFK 784
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EAW RG A LG EAI +KALE + + A+ +++ + A+E
Sbjct: 785 TDDHEAWYNRGFALYKLGRFEEAIISCNKALEIKLDYANAFYKKACYLALQNQIDLALEK 844
Query: 506 LSACVKLDKE 515
L + L+ +
Sbjct: 845 LQQAITLNPD 854
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
NR +L + I DKALQ P QA+ +G A LGR EEA++ +++ +
Sbjct: 463 NRGSALDELGRIEEAIASFDKALQFKPDYHQAWYNRGIALDKLGRIEEAIASYDQAW--- 519
Query: 134 LHQSADLKQFLELEELLTAAKQDRSVTCE-----YDVSNSMSSLTVSESGLNANDK 184
++ L++ +LEE +T + + Y+ N++ L E G+ + DK
Sbjct: 520 YNRGIALRKLGQLEEAITCFDKALQFKLDDHQAWYNRGNALFDLGRLEEGIASFDK 575
>gi|404403850|ref|ZP_10995434.1| hypothetical protein AJC13_00370 [Alistipes sp. JC136]
Length = 662
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 114/253 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ N A + F ++ +P+Y +A R R+ + A+ DF EAI+ P
Sbjct: 66 RGIAKYNLDDLLGAEADFSTAIRLNPVYTQAYTYRAITRSRLGNYDDALQDFREAIELRP 125
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG R + EAI+D K + E AD RG+ KD A E+
Sbjct: 126 DLPGPYYSRGVTRLLNQQFKEAIEDFDKFIRQENKVADAFICRGLSYLHLKDTTRAYENF 185
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ ++EN + Y G +YK+AE KAI D ++ ++ + Y
Sbjct: 186 NTAIRTNRENPNGYNRRGGLHLQQEQYKEAEADFNKAISCDSTYVLSYFNRALVYNATNR 245
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+AL +V+ +D S Y R +L +G + +A++D P+N+ Y RA
Sbjct: 246 PMQALADFDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRA 305
Query: 627 SCYHAIGEYREAV 639
Y +GE +AV
Sbjct: 306 GVYAQLGEIEQAV 318
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 12/228 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ ++ ++ AI FD+ ++++ +A I RG + ++ A +F AI++N
Sbjct: 133 SRGVTRLLNQQFKEAIEDFDKFIRQENKVADAFICRGLSYLHLKDTTRAYENFNTAIRTN 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA---- 501
+ RRG + EA D +KA+ + R +V +NA
Sbjct: 193 RENPNGYNRRGGLHLQQEQYKEAEADFNKAISCDSTYVLSYFNRALV------YNATNRP 246
Query: 502 --AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D ++LD N Y + + IG+Y +A E + K N + + +
Sbjct: 247 MQALADFDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRAG 306
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
Y L E+A+ + + F+ AY RG L L + A D
Sbjct: 307 VYAQLGEIEQAVADYSAAIKLYPDFANAYIYRGRLREYLNDPQGAKSD 354
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 31/159 (19%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
RGI Q +Y ++++ + ++ +P P + R T RA +QR
Sbjct: 487 FERGITQSLIKQYTNSVNTYSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRITI 546
Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ A++D +A++ P A+ R A G EA +D S
Sbjct: 547 DSDPANRLNNNSKRTYSYDEAVADLNKAVKLFPDFAYAYYNRANLLALSGSLPEAYEDYS 606
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
KA+E P A+ + RGI+ KD D+S +L
Sbjct: 607 KAIELNPAFAEAYYNRGIIQIFMKDTRKGCLDISKAGEL 645
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
L RG ++ ++ +++ ++ AI+ NPS + R RA + + + +I + + +
Sbjct: 485 VLFERGITQSLIKQYTNSVNTYSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRI 544
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ + A+ L+ + + + AV DL+ VKL + AY L+ G +A
Sbjct: 545 TIDSDPANRLNNNSKRTYSYDE---AVADLNKAVKLFPDFAYAYYNRANLLALSGSLPEA 601
Query: 537 EEAHLKAIQLDRNFLEAW 554
E + KAI+L+ F EA+
Sbjct: 602 YEDYSKAIELNPAFAEAY 619
>gi|432331042|ref|YP_007249185.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
gi|432137751|gb|AGB02678.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
Length = 4078
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 117/254 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA VN +Y A+ F++ L + +L RG A+A + AI F A+Q +P
Sbjct: 352 RGIACVNLSRYEEALESFNRRLGLGQNHAGSLYFRGIAQARLGRNKEAIESFDAALQVDP 411
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S A ++G A A+LG EA+ +AL P +D ++ +G K AV++
Sbjct: 412 SCASAAFQQGVAYASLGRFSEAVASYDRALRINPGLSDAIYHKGFALSKLGRTEDAVQEF 471
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
V D +N A+ GL L IG + +A EA +++ L F +A L
Sbjct: 472 ERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAFDESLALKPGFAQAAFDKGAALIRLGK 531
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E AL+ Q + + ++ AY+ +GL L L + AI IDP++ LY R
Sbjct: 532 FEDALQAFDQAIVTNSKYVNAYYQKGLTLVQLERFSDAITAFEQAAVIDPTHTLSLYHRG 591
Query: 627 SCYHAIGEYREAVI 640
+ + EAV+
Sbjct: 592 LTLGKLKRFMEAVV 605
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 122/252 (48%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A V ++ A+ F + L+ P AL RG A ++ A+ DF ++ P
Sbjct: 285 GLAGVETRQFDDAVEAFTRNLEIHPGNAGALFHRGLAHYRLKQYREAVQDFDSTLEPEPG 344
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EAW RRG A L EA++ ++ L N A L+ RGI + A+E
Sbjct: 345 NKEAWYRRGIACVNLSRYEEALESFNRRLGLGQNHAGSLYFRGIAQARLGRNKEAIESFD 404
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
A +++D SA G+A +S+G + +A ++ +A++++ +A H L +
Sbjct: 405 AALQVDPSCASAAFQQGVAYASLGRFSEAVASYDRALRINPGLSDAIYHKGFALSKLGRT 464
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E A++ ++ + D + +KA+H +GL L +G+ +AI+ L + P + + + +
Sbjct: 465 EDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAFDESLALKPGFAQAAFDKGA 524
Query: 628 CYHAIGEYREAV 639
+G++ +A+
Sbjct: 525 ALIRLGKFEDAL 536
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 1/255 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG + V+ G + AI+ FDQ+L P A +G A A + F AI
Sbjct: 3750 FERGRSLVHTGMFREAIASFDQVLILAPGNANAHFEKGRALIALGNHAGATAAFDRAIDI 3809
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NPS +A +G+A G AI L +ALE P A + ++G+ + + AV+
Sbjct: 3810 NPSCWQALAGKGRAETYQGNYDGAITALDRALEIMPKKAILHDQKGLAYAALEQYRDAVQ 3869
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ + + + G+AL+ +G Y+ A EA KAI+ D N EAW DL
Sbjct: 3870 SYDRALEIEPLPR-VFAHKGIALAELGMYRDAIEAFDKAIEHDGNLAEAWMGKGNVQYDL 3928
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
A + ++ L +D ++A+ +G++L + ++A++ L IDP+ +
Sbjct: 3929 GKYADAEKAYERGLALDPENAEAWTRQGMVLSAQQKFEEALEHYDRALMIDPTFSIAYFT 3988
Query: 625 RASCYHAIGEYREAV 639
R S A+ Y+EAV
Sbjct: 3989 RGSALIAMKRYQEAV 4003
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 114/253 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIAQ G+ AI FD L+ DP A +G A A A++ + A++ NP
Sbjct: 386 RGIAQARLGRNKEAIESFDAALQVDPSCASAAFQQGVAYASLGRFSEAVASYDRALRINP 445
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A +G A + LG + +A+Q+ + + F+P +A H++G+ K F+ A+E
Sbjct: 446 GLSDAIYHKGFALSKLGRTEDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAF 505
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L A G AL +G+++ A +A +AI + ++ A+ L
Sbjct: 506 DESLALKPGFAQAAFDKGAALIRLGKFEDALQAFDQAIVTNSKYVNAYYQKGLTLVQLER 565
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
A+ +Q ID + + + RGL L L + +A+ + L I P N Y +
Sbjct: 566 FSDAITAFEQAAVIDPTHTLSLYHRGLTLGKLKRFMEAVVAFDAVLAISPENTNARYEKG 625
Query: 627 SCYHAIGEYREAV 639
+ Y EAV
Sbjct: 626 IALFHLLRYAEAV 638
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 148/322 (45%), Gaps = 8/322 (2%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN +E++ K+S D S + R + L E + + F TR +
Sbjct: 2331 LNYHAAATEAFEKTSALDATSVPAAFGRGQ------SLAELDRDEEAIAAF--TRTLELD 2382
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S + RG A + Y AIS FD ++ P + ++ RG A Q + E AI
Sbjct: 2383 STQAEAAYLRGCAYLRLALYTEAISSFDYTIQYAPDHAQSHYRRGLALQAQGKYEKAIRS 2442
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +A+ + S +A + G AAL ++ +A++ + LE P ADIL + F+
Sbjct: 2443 YKQALTHDGSITDAVYQTGLCYAALNKNDQALKTFDRVLETLPERADILFHKSRALFRLM 2502
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ + A + ++ + + + G L +G ++++ EA+ +++ L+ + + W
Sbjct: 2503 RYEEALTAIDASLAIENNDVAVWEQKGSTLYELGRFEESLEAYDRSLALNPDSITCWYLK 2562
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ DLA E+A+ C +V+ D+ + A+ +G L LG+ AI+ L+ L + P
Sbjct: 2563 GRSLSDLARYEEAIPCFDRVIETDETCAGAWLRKGSSLLSLGKFAPAIEALTRSLDLQPD 2622
Query: 618 NIECLYLRASCYHAIGEYREAV 639
N Y R + +Y +AV
Sbjct: 2623 NANGWYDRGIALAELKQYEDAV 2644
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 1/255 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G A + G +A A + FD+ + +P +AL G+G A +Q + AI+ A++
Sbjct: 3784 FEKGRALIALGNHAGATAAFDRAIDINPSCWQALAGKGRAETYQGNYDGAITALDRALEI 3843
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P ++G A AAL + +A+Q +ALE EP H +GI + + A+E
Sbjct: 3844 MPKKAILHDQKGLAYAALEQYRDAVQSYDRALEIEPLPRVFAH-KGIALAELGMYRDAIE 3902
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++ D A+ G +G+Y AE+A+ + + LD EAW
Sbjct: 3903 AFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALDPENAEAWTRQGMVLSAQ 3962
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+ALE + L ID FS AY RG L + ++++A++ + L I P ++
Sbjct: 3963 QKFEEALEHYDRALMIDPTFSIAYFTRGSALIAMKRYQEAVEAFDAMLHIQPDFVDAYIH 4022
Query: 625 RASCYHAIGEYREAV 639
+ + Y++A+
Sbjct: 4023 KGRALQELELYQDAL 4037
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ ++ L +G + ++ GK+A AI + L P RG A A
Sbjct: 2578 CFDRVIETDETCAGAWLRKGSSLLSLGKFAPAIEALTRSLDLQPDNANGWYDRGIALAEL 2637
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ E A++ + AI N AW +G A LG +AIQ +P + ++
Sbjct: 2638 KQYEDAVASYDRAIAINRKYANAWYDKGVALVHLGRDTDAIQAFENTTAIDPRFMNAFYD 2697
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G+ + + AV + + A T GL+L + Y++A + A+ L+
Sbjct: 2698 KGLALARLGEHQDAVTAFDGVLAISASFVPALTQKGLSLFQLQRYEEAASSLGAALDLNS 2757
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
EAW H Y+ L N +A+ Q + +D R ++ +GL+L G Q A+ +
Sbjct: 2758 GIFEAWYHQGLAYRHLGNVSEAIASFDQAISLDPRSFAVHYEKGLVLSGQEQWDAAVAEF 2817
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ D E Y HA+ ++ EA
Sbjct: 2818 RIAIECDGGKKEAYYALGLALHALEQFGEA 2847
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+++ + D+IL +P + + +G A A Q + AI +++A++ N EAW R+
Sbjct: 973 RFSEVVETDDRILSLNPTLIDTWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRK 1032
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L + +A+ S+ALE P DI +G + A+ +K+D +
Sbjct: 1033 GNALMDLNKVQDAVGAYSRALEINPALCDIWMRKGDALQQLGKTEDAILAYGKSLKIDPD 1092
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N+ + G A + Y+ A +A AI L++ +EA+ + + + E A+ +
Sbjct: 1093 NEPGWIRQGKAFFDLTRYQDAIDAFDNAISLNQRSIEAFWYKGLALEKVNRHEGAIHVFE 1152
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+L ID + A +GL L LG H+ AI L I P + Y + IG Y
Sbjct: 1153 ILLEIDPKNGDAQFHKGLALAVLGDHRDAIGSFDKTLQILPDSAPAWYNKGKSLIEIGRY 1212
Query: 636 REAVI 640
+A++
Sbjct: 1213 PDAIV 1217
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 136/631 (21%), Positives = 253/631 (40%), Gaps = 114/631 (18%)
Query: 80 SQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG------YEHA 133
S+L+ HK I D+A+++ P A+ ++ +F +LG +E + + + + +
Sbjct: 3179 SRLKRHKDAIHAFDQAIRVRPDYFDAHEVRARSFDSLGDPKETIDAYNRALALQPMHVPS 3238
Query: 134 LHQSADLKQFLELEELLTAAKQ-DRSVTCE-------YDVSNSMSSLTVSESGLNANDKM 185
LH+ + LE A K DR++ + YD ++S+L + + DK+
Sbjct: 3239 LHRKG--VALIRLERYEEAIKVFDRALEIDPACADAIYDKGRALSALGMYREAVKTYDKL 3296
Query: 186 ----SETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGL 241
+ +E I + D + + D D N ++ KG S ++ +G
Sbjct: 3297 LGIDAGNAEVSYDKGIALAHLGRHDDAIVAFNKALDLDPGNAQAAYHKGLS---LATTGR 3353
Query: 242 HING--KLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGR 299
H + V E GS +G ++R G
Sbjct: 3354 HPDAIEAFDRVIEREPGSVEGW-----------VHR----------------------GL 3380
Query: 300 QTNGTHDVHDKLSS--DSASLNDSNTNSESYSKSSI-SDNKSSDSTESRSK-LSFKWDML 355
+D + S + +++ SN + + S+I + D+ E+ +K L F+ D +
Sbjct: 3381 SLFALGKYNDAVESYVRAIAIDPSNAEAWYFKGSAIFASGGYEDAIEAFNKALEFRPDYV 3440
Query: 356 KETSNEAKRNKKFCVTR---ISKSKSIS-----VDFRLSRGIAQVNEGKYASAISIFDQI 407
+++ + + R I+ +++ VD +G + + +Y AI FD
Sbjct: 3441 SAYNDKGRSLFHMGMFREAVIAFDNALALQQKNVDALYHKGTSLLRLEQYDEAIQAFDLA 3500
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI------------------------- 442
LK P + G+G A + + A+S FT+A+
Sbjct: 3501 LKIRPNHAHLWTGKGIALSALGRDQDAVSFFTKALGIDSRDARAAYQLGVSYLKLSKYHE 3560
Query: 443 ---------QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
P+ EA ++G+A A LG +AI KA+ + N A+ RGI
Sbjct: 3561 AIRYLEGALAQQPACVEANYQKGRALAMLGMHNDAITAYDKAIAGKENFAEAWLYRGISQ 3620
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ A+ D + L + A+ + G+AL + + +A EA A+ ++ + EA
Sbjct: 3621 ASLDQYDRAILDYDHALGLRPDYAPAHLFRGIALIHLSRHDQAVEAFNHALTVEPEYPEA 3680
Query: 554 WGHLTQFYQDLANSEK-----ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
FY+ LA E+ A+ Q L + R+++A+H +G+ L GQH++AI
Sbjct: 3681 L-----FYKGLALLEQELYTEAIPVFDQALAANNRYAEAWHNKGVALARTGQHEEAIAAF 3735
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ LGI E L+ R G +REA+
Sbjct: 3736 NAALGIRSDYAEALFERGRSLVHTGMFREAI 3766
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 135/293 (46%), Gaps = 13/293 (4%)
Query: 360 NEAKRNKKFCVTRISKSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQ 406
++A +K F ++++ +++ +F + +G+ V G++ AI FD+
Sbjct: 448 SDAIYHKGFALSKLGRTEDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAFDE 507
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
L P + +A +G A + E A+ F +AI +N A+ ++G L
Sbjct: 508 SLALKPGFAQAAFDKGAALIRLGKFEDALQAFDQAIVTNSKYVNAYYQKGLTLVQLERFS 567
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
+AI +A +P L+ RG+ K K F AV A + + EN +A G+A
Sbjct: 568 DAITAFEQAAVIDPTHTLSLYHRGLTLGKLKRFMEAVVAFDAVLAISPENTNARYEKGIA 627
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
L + Y +A + +A++ + + W ++ + + E+AL + + ++ + ++
Sbjct: 628 LFHLLRYAEAVQEFHEALEQNPALVNGWLYMGISLAHIGHLEEALPAFNKAIALNPKLAE 687
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY +G++L L +H++A+ L+ L + ++ + A+G + EAV
Sbjct: 688 AYVRKGIVLFTLERHEEAVSTLNRALDENAKDVYGWCYKGLALSALGRFDEAV 740
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ G+Y A+ Q +P +A G A R+ + A+ FT ++ +P
Sbjct: 250 RGMSLFKLGRYDEALDALRQATAINPDLSDAWYYLGLAGVETRQFDDAVEAFTRNLEIHP 309
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A RG A L + EA+QD LE EP + + + RGI + A+E
Sbjct: 310 GNAGALFHRGLAHYRLKQYREAVQDFDSTLEPEPGNKEAWYRRGIACVNLSRYEEALESF 369
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L + + + + G+A + +G K+A E+ A+Q+D + A Y L
Sbjct: 370 NRRLGLGQNHAGSLYFRGIAQARLGRNKEAIESFDAALQVDPSCASAAFQQGVAYASLGR 429
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+ + L I+ S A + +G L LG+ + A+++ + DP N + + +
Sbjct: 430 FSEAVASYDRALRINPGLSDAIYHKGFALSKLGRTEDAVQEFERTVAFDPKNAKAFHQKG 489
Query: 627 SCYHAIGEYREAV 639
IG + EA+
Sbjct: 490 LQLVKIGRFDEAI 502
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 113/240 (47%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I +++ L PM+ +L +G A E AI F A++ +P+ +A +G+A +
Sbjct: 3222 IDAYNRALALQPMHVPSLHRKGVALIRLERYEEAIKVFDRALEIDPACADAIYDKGRALS 3281
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
ALG EA++ K L + +A++ +++GI + A+ + + LD N A
Sbjct: 3282 ALGMYREAVKTYDKLLGIDAGNAEVSYDKGIALAHLGRHDDAIVAFNKALDLDPGNAQAA 3341
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
+ GL+L++ G + A EA + I+ + +E W H L A+E + + I
Sbjct: 3342 YHKGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGLSLFALGKYNDAVESYVRAIAI 3401
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
D ++A++ +G + G ++ AI+ + L P + + +G +REAVI
Sbjct: 3402 DPSNAEAWYFKGSAIFASGGYEDAIEAFNKALEFRPDYVSAYNDKGRSLFHMGMFREAVI 3461
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T ++ I LS RG+ ++ A+ FD +L P A +G A
Sbjct: 569 AITAFEQAAVIDPTHTLSLYHRGLTLGKLKRFMEAVVAFDAVLAISPENTNARYEKGIAL 628
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A+ +F EA++ NP+ W G + A +G EA+ +KA+ P A+
Sbjct: 629 FHLLRYAEAVQEFHEALEQNPALVNGWLYMGISLAHIGHLEEALPAFNKAIALNPKLAEA 688
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+GIV F + AV L+ + + ++ + Y GLALS++G + +A + KA++
Sbjct: 689 YVRKGIVLFTLERHEEAVSTLNRALDENAKDVYGWCYKGLALSALGRFDEAVRSFDKALE 748
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++R A+ L +A+ Q L + K + +G+ L + +AI
Sbjct: 749 INRRCARAFFERGNALLKLGKPLEAVVSYDQALELSPDDPKILYQKGMALTQRERFDEAI 808
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ S L ++P N Y Y Y +A+
Sbjct: 809 RAFESALALEPENASGAYYLGVAYAGRERYDDAI 842
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 10/258 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A G++ A++ FD +L + AL +G + + E A S A+ N
Sbjct: 2698 KGLALARLGEHQDAVTAFDGVLAISASFVPALTQKGLSLFQLQRYEEAASSLGAALDLNS 2757
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW +G A LG EAI +A+ +P S + +E+G+V + ++AAV +
Sbjct: 2758 GIFEAWYHQGLAYRHLGNVSEAIASFDQAISLDPRSFAVHYEKGLVLSGQEQWDAAVAEF 2817
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ D K AY LGLAL ++ ++ +A +A K LD + +A +Y+ L++
Sbjct: 2818 RIAIECDGGKKEAYYALGLALHALEQFGEARDAFTKTAALDPGYADA-----HYYEGLSS 2872
Query: 567 S-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+A+ + + + + A++ +GL L +G + A +P N
Sbjct: 2873 EHLEQYREAVSSFDRTIAVIADHAMAWYHKGLSLEHIGNDEDAADAFEHARRTEPDNPAI 2932
Query: 622 LYLRASCYHAIGEYREAV 639
L +G++ A+
Sbjct: 2933 LLSLGKARSRLGQFEMAI 2950
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 116/253 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA G++ AIS +D L DP + + +G A A + AI + +AI+ P
Sbjct: 114 KGIALYELGRFTDAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIVP 173
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ +G + LG +A+ ++A E +P+ + + R + K A +
Sbjct: 174 GYARAYYNKGISLYELGNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQNEFAAQSA 233
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ + G++L +G Y +A +A +A ++ + +AW +L +
Sbjct: 234 EKFLAQEPDHADIWAIRGMSLFKLGRYDEALDALRQATAINPDLSDAWYYLGLAGVETRQ 293
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ A+E + L I + A RGL + L Q+++A++D S L +P N E Y R
Sbjct: 294 FDDAVEAFTRNLEIHPGNAGALFHRGLAHYRLKQYREAVQDFDSTLEPEPGNKEAWYRRG 353
Query: 627 SCYHAIGEYREAV 639
+ Y EA+
Sbjct: 354 IACVNLSRYEEAL 366
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 111/253 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA V +Y AI+ F LK DP P G A ++ + AI +F+ A + +P
Sbjct: 862 KGIALVQRERYTEAITAFLSALKRDPDNPVTHYYLGLAYLQDKQFKNAIPEFSRATELDP 921
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S +A+ G A AA+G EA+ K+L P D + R + F+ VE
Sbjct: 922 SLLDAYLYHGIALAAIGRHDEAVPLFDKSLAGNPTHIDAMTARARSLMVLERFSEVVETD 981
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L+ + G AL+S ++A A+ KA++++ F EAW DL
Sbjct: 982 DRILSLNPTLIDTWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRKGNALMDLNK 1041
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ A+ + L I+ + +G L LG+ + AI L IDP N +
Sbjct: 1042 VQDAVGAYSRALEINPALCDIWMRKGDALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQG 1101
Query: 627 SCYHAIGEYREAV 639
+ + Y++A+
Sbjct: 1102 KAFFDLTRYQDAI 1114
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A + G Y AI FD+ L D RG A R E A+ F +++ +P
Sbjct: 1237 GYALLKTGDYTGAIEAFDRNLTRDGSNAPGHFNRGIALEKSRRFEEALESFDKSLIYDPG 1296
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ +G+ A LG +A K L+ +P D GI + F ++ D
Sbjct: 1297 NALAFYHKGKVYADLGRHADAAFAFDKTLQLKPRYTDARLRMGIAEYNLGKFIESIHDFD 1356
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ + + A+ Y AL+ + +++A A+ A++LD + + + +LA
Sbjct: 1357 KTIAENANSSQAHYYKARALADLKRHEEAVGAYDLALRLDPDTADIHYYKGFSLMELAQF 1416
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
EKA+ ++ + + A++ GL L L + AI+ L + + P Y R
Sbjct: 1417 EKAIPEFERTEVLTPANAMAFYQHGLALVRLERENDAIQVLDQSIALSPRYAPAQYQRGL 1476
Query: 628 CYHAIGEYREAV 639
+++G YRE++
Sbjct: 1477 ALNSLGRYRESL 1488
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 117/260 (45%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S++ +G+A ++ AI +F+ +L+ DP +A +G A A + AI F
Sbjct: 1127 SIEAFWYKGLALEKVNRHEGAIHVFEILLEIDPKNGDAQFHKGLALAVLGDHRDAIGSFD 1186
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ +Q P + AW +G++ +G +AI L +A+E E + + + G K D+
Sbjct: 1187 KTLQILPDSAPAWYNKGKSLIEIGRYPDAIVALKRAIEIETSYTEAFYYLGYALLKTGDY 1246
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E + D N + G+AL +++A E+ K++ D A+ H +
Sbjct: 1247 TGAIEAFDRNLTRDGSNAPGHFNRGIALEKSRRFEEALESFDKSLIYDPGNALAFYHKGK 1306
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
Y DL A + L + R++ A G+ + LG+ ++I D + + ++
Sbjct: 1307 VYADLGRHADAAFAFDKTLQLKPRYTDARLRMGIAEYNLGKFIESIHDFDKTIAENANSS 1366
Query: 620 ECLYLRASCYHAIGEYREAV 639
+ Y +A + + EAV
Sbjct: 1367 QAHYYKARALADLKRHEEAV 1386
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 115/258 (44%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+F L +GIA + ++ A + Q + P E RG + + A+ F +A
Sbjct: 2965 EFLLEKGIALAHLERHEEAEVVLGQSTERLPDRFEPPFLRGLSLMLTGRYDDAVRSFDKA 3024
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ N + + W + + A LG + EA+ K L P+ A+ RG + K F+
Sbjct: 3025 LALNETDPDIWYHKAISLAHLGRAEEAVPAFDKVLGLRPDDAEAFLGRGRAYYTLKSFDR 3084
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E + ++ +A+ G+AL +G Y++A A K ++ D +A + Y
Sbjct: 3085 AIESFDRVIGYLPQHAAAWHEKGMALYDLGRYEEAIAAFDKTLEEDGGNHDALYYCALAY 3144
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ +A+E + +L + A++ GL L L +HK AI + + P +
Sbjct: 3145 AAIGKDAEAVESFELLLTRAPDNATAWYENGLALSRLKRHKDAIHAFDQAIRVRPDYFDA 3204
Query: 622 LYLRASCYHAIGEYREAV 639
+RA + ++G+ +E +
Sbjct: 3205 HEVRARSFDSLGDPKETI 3222
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 129/307 (42%), Gaps = 34/307 (11%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F + + K D RL GIA+ N GK+ +I FD+ + E+ +A + A A
Sbjct: 1319 FAFDKTLQLKPRYTDARLRMGIAEYNLGKFIESIHDFDKTIAENANSSQAHYYKARALAD 1378
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ E A+ + A++ +P + +G + L + +AI + + P +A +
Sbjct: 1379 LKRHEEAVGAYDLALRLDPDTADIHYYKGFSLMELAQFEKAIPEFERTEVLTPANAMAFY 1438
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE--------- 538
+ G+ + + N A++ L + L A GLAL+S+G Y+++ E
Sbjct: 1439 QHGLALVRLERENDAIQVLDQSIALSPRYAPAQYQRGLALNSLGRYRESLESFDGALSAD 1498
Query: 539 -----AHLK--------------------AIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
A L+ AI + +AW +L +AL
Sbjct: 1499 PQLADAALQKAIALASLGRHADALGAADVAIAIRPELAQAWHRKGTALAELDRVPEALAA 1558
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + ID ++++ RGL+L LG+H +AI+ L + P+ + Y + A+G
Sbjct: 1559 FDRAIEIDPANARSHFERGLVLARLGRHIEAIQAFDQSLSLIPNYVPAFYNKGLALMAVG 1618
Query: 634 EYREAVI 640
+ EAV+
Sbjct: 1619 MHEEAVL 1625
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G A + GK+ A+ FDQ + + Y A +G AI+ F +A
Sbjct: 520 FDKGAALIRLGKFEDALQAFDQAIVTNSKYVNAYYQKGLTLVQLERFSDAITAFEQAAVI 579
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ + RG L +EA+ L P + + +E+GI F + AV+
Sbjct: 580 DPTHTLSLYHRGLTLGKLKRFMEAVVAFDAVLAISPENTNARYEKGIALFHLLRYAEAVQ 639
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++ + + + Y+G++L+ IG ++A A KAI L+ EA+ L
Sbjct: 640 EFHEALEQNPALVNGWLYMGISLAHIGHLEEALPAFNKAIALNPKLAEAYVRKGIVLFTL 699
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+A+ L + L + + + +GL L LG+ +A++ L I+ +
Sbjct: 700 ERHEEAVSTLNRALDENAKDVYGWCYKGLALSALGRFDEAVRSFDKALEINRRCARAFFE 759
Query: 625 RASCYHAIGEYREAVI 640
R + +G+ EAV+
Sbjct: 760 RGNALLKLGKPLEAVV 775
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 126/266 (47%), Gaps = 14/266 (5%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L GIA G++ A+ +FD+ L +P + +A+ TARA R L + F+E
Sbjct: 924 LDAYLYHGIALAAIGRHDEAVPLFDKSLAGNPTHIDAM----TARA--RSL-MVLERFSE 976
Query: 441 AIQS-------NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+++ NP+ + W ++G A A+ EAI SKALE A+ +G
Sbjct: 977 VVETDDRILSLNPTLIDTWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRKGNAL 1036
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
AV S ++++ + G AL +G+ + A A+ K++++D +
Sbjct: 1037 MDLNKVQDAVGAYSRALEINPALCDIWMRKGDALQQLGKTEDAILAYGKSLKIDPDNEPG 1096
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
W + + DL + A++ + +++R +A+ +GL L + +H+ AI L
Sbjct: 1097 WIRQGKAFFDLTRYQDAIDAFDNAISLNQRSIEAFWYKGLALEKVNRHEGAIHVFEILLE 1156
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
IDP N + + + +G++R+A+
Sbjct: 1157 IDPKNGDAQFHKGLALAVLGDHRDAI 1182
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 117/279 (41%), Gaps = 34/279 (12%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK A A+ F+ +L P A G A + + + AI F +AI+ P +A +
Sbjct: 3148 GKDAEAVESFELLLTRAPDNATAWYENGLALSRLKRHKDAIHAFDQAIRVRPDYFDAHEV 3207
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R ++ +LG+ E I ++AL +P LH +G+ + + + A++ +++D
Sbjct: 3208 RARSFDSLGDPKETIDAYNRALALQPMHVPSLHRKGVALIRLERYEEAIKVFDRALEIDP 3267
Query: 515 ENKSAYTYLGLALSSIGEYKKAEE-----------------------AHL---------- 541
A G ALS++G Y++A + AHL
Sbjct: 3268 ACADAIYDKGRALSALGMYREAVKTYDKLLGIDAGNAEVSYDKGIALAHLGRHDDAIVAF 3327
Query: 542 -KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KA+ LD +A H A+E +V+ + + + RGL L LG+
Sbjct: 3328 NKALDLDPGNAQAAYHKGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGLSLFALGK 3387
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ A++ + IDPSN E Y + S A G Y +A+
Sbjct: 3388 YNDAVESYVRAIAIDPSNAEAWYFKGSAIFASGGYEDAI 3426
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 126/288 (43%), Gaps = 34/288 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA + G++ AI +++ ++ P Y A +G + L+ A+S F A + +
Sbjct: 147 NKGIALADLGRHQEAIYSYNKAIEIVPGYARAYYNKGISLYELGNLDDALSAFNRAAELD 206
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W R + ++ A Q K L EP+ ADI RG+ FK ++ A++
Sbjct: 207 PDDIWVWYYRSFILSKQDQNEFAAQSAEKFLAQEPDHADIWAIRGMSLFKLGRYDEALDA 266
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LT 558
L ++ + A+ YLGLA ++ A EA + +++ A H L
Sbjct: 267 LRQATAINPDLSDAWYYLGLAGVETRQFDDAVEAFTRNLEIHPGNAGALFHRGLAHYRLK 326
Query: 559 QFYQ---------------------------DLANSEKALECLQQVLYIDKRFSKAYHLR 591
Q+ + +L+ E+ALE + L + + + + + R
Sbjct: 327 QYREAVQDFDSTLEPEPGNKEAWYRRGIACVNLSRYEEALESFNRRLGLGQNHAGSLYFR 386
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G+ LG++K+AI+ + L +DPS + + Y ++G + EAV
Sbjct: 387 GIAQARLGRNKEAIESFDAALQVDPSCASAAFQQGVAYASLGRFSEAV 434
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 113/232 (48%), Gaps = 4/232 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I K+I D +G+A +Y A+ +D+ L+ +P+ P +G A A
Sbjct: 3843 IMPKKAILHD---QKGLAYAALEQYRDAVQSYDRALEIEPL-PRVFAHKGIALAELGMYR 3898
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI F +AI+ + + EAW +G + LG+ +A + + L +P +A+ +G+V
Sbjct: 3899 DAIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALDPENAEAWTRQGMV 3958
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ F A+E + +D AY G AL ++ Y++A EA + + +F++
Sbjct: 3959 LSAQQKFEEALEHYDRALMIDPTFSIAYFTRGSALIAMKRYQEAVEAFDAMLHIQPDFVD 4018
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
A+ H + Q+L + AL ++ L ID + ++ G +L +G+H++A
Sbjct: 4019 AYIHKGRALQELELYQDALAVFKRALEIDPTRKECWNDIGDILDRIGKHEEA 4070
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V+ ++ ++ D ++ +G++ + G A F+ + +P P L+ G AR
Sbjct: 2881 AVSSFDRTIAVIADHAMAWYHKGLSLEHIGNDEDAADAFEHARRTEPDNPAILLSLGKAR 2940
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + E AI + A+ PS GE +G A A L EA L ++ E P+ +
Sbjct: 2941 SRLGQFEMAIRIYDHALTLLPSDGEFLLEKGIALAHLERHEEAEVVLGQSTERLPDRFEP 3000
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG+ ++ AV + L++ + + + ++L+ +G ++A A K +
Sbjct: 3001 PFLRGLSLMLTGRYDDAVRSFDKALALNETDPDIWYHKAISLAHLGRAEEAVPAFDKVLG 3060
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L + EA+ + Y L + ++A+E +V+ + + A+H +G+ L+ LG++++AI
Sbjct: 3061 LRPDDAEAFLGRGRAYYTLKSFDRAIESFDRVIGYLPQHAAAWHEKGMALYDLGRYEEAI 3120
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L D N + LY A Y AIG+ EAV
Sbjct: 3121 AAFDKTLEEDGGNHDALYYCALAYAAIGKDAEAV 3154
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 118/287 (41%), Gaps = 34/287 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYP------------------------------- 415
+GIA + GK+ AI+ +D + +P P
Sbjct: 46 KGIALYDLGKFEDAIAAYDMAVSIEPSDPNAWYNKAATLAQVGKNEEALEACDRLLAIRY 105
Query: 416 ---EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
EA I +G A AIS + A+ +P + + +G A A LG EAI
Sbjct: 106 DNAEAWILKGIALYELGRFTDAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSY 165
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+KA+E P A + +GI ++ + + A+ + +LD ++ + Y LS +
Sbjct: 166 NKAIEIVPGYARAYYNKGISLYELGNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQ 225
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ A ++ K + + + + W L ++AL+ L+Q I+ S A++ G
Sbjct: 226 NEFAAQSAEKFLAQEPDHADIWAIRGMSLFKLGRYDEALDALRQATAINPDLSDAWYYLG 285
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L Q A++ + L I P N L+ R ++ + +YREAV
Sbjct: 286 LAGVETRQFDDAVEAFTRNLEIHPGNAGALFHRGLAHYRLKQYREAV 332
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 118/288 (40%), Gaps = 34/288 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G++ G++ AI FD++++ +P E + RG + + A+ + AI +P
Sbjct: 3344 KGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGLSLFALGKYNDAVESYVRAIAIDP 3403
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN------------------------- 481
S EAW +G A A G +AI+ +KALEF P+
Sbjct: 3404 SNAEAWYFKGSAIFASGGYEDAIEAFNKALEFRPDYVSAYNDKGRSLFHMGMFREAVIAF 3463
Query: 482 ---------SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+ D L+ +G + + ++ A++ +K+ + +T G+ALS++G
Sbjct: 3464 DNALALQQKNVDALYHKGTSLLRLEQYDEAIQAFDLALKIRPNHAHLWTGKGIALSALGR 3523
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ A KA+ +D A L Y L+ +A+ L+ L +A + +G
Sbjct: 3524 DQDAVSFFTKALGIDSRDARAAYQLGVSYLKLSKYHEAIRYLEGALAQQPACVEANYQKG 3583
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L LG H AI + + E R ++ +Y A++
Sbjct: 3584 RALAMLGMHNDAITAYDKAIAGKENFAEAWLYRGISQASLDQYDRAIL 3631
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 116/255 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +GI + G++ AI +FD+ L P +A +G A + E AI+ + A+
Sbjct: 10 LRQGIELYDLGRFQEAIVMFDRGLALYPRLAKAHYFKGIALYDLGKFEDAIAAYDMAVSI 69
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
PS AW + A +G++ EA++ + L ++A+ +GI ++ F A+
Sbjct: 70 EPSDPNAWYNKAATLAQVGKNEEALEACDRLLAIRYDNAEAWILKGIALYELGRFTDAIS 129
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +D + Y G+AL+ +G +++A ++ KAI++ + A+ + +L
Sbjct: 130 AYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIVPGYARAYYNKGISLYEL 189
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
N + AL + +D ++ R +L Q++ A + L +P + + +
Sbjct: 190 GNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQNEFAAQSAEKFLAQEPDHADIWAI 249
Query: 625 RASCYHAIGEYREAV 639
R +G Y EA+
Sbjct: 250 RGMSLFKLGRYDEAL 264
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 117/293 (39%), Gaps = 34/293 (11%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + I+ + G+ A+ FD++L P EA +GRG A + + AI F
Sbjct: 3033 DIWYHKAISLAHLGRAEEAVPAFDKVLGLRPDDAEAFLGRGRAYYTLKSFDRAIESFDRV 3092
Query: 442 IQSNPSAGEAWKRRGQA----------------------------------RAALGESVE 467
I P AW +G A AA+G+ E
Sbjct: 3093 IGYLPQHAAAWHEKGMALYDLGRYEEAIAAFDKTLEEDGGNHDALYYCALAYAAIGKDAE 3152
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A++ L P++A +E G+ + K A+ +++ + A+ +
Sbjct: 3153 AVESFELLLTRAPDNATAWYENGLALSRLKRHKDAIHAFDQAIRVRPDYFDAHEVRARSF 3212
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
S+G+ K+ +A+ +A+ L + + L E+A++ + L ID + A
Sbjct: 3213 DSLGDPKETIDAYNRALALQPMHVPSLHRKGVALIRLERYEEAIKVFDRALEIDPACADA 3272
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ +G L LG +++A+K LGID N E Y + +G + +A++
Sbjct: 3273 IYDKGRALSALGMYREAVKTYDKLLGIDAGNAEVSYDKGIALAHLGRHDDAIV 3325
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 14/262 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQ 443
+RGIA ++ A+ FD+ L DP A +G A R +AA + F + +Q
Sbjct: 1268 FNRGIALEKSRRFEEALESFDKSLIYDPGNALAFYHKGKVYADLGRHADAAFA-FDKTLQ 1326
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P +A R G A LG+ +E+I D K + NS+ + + K AV
Sbjct: 1327 LKPRYTDARLRMGIAEYNLGKFIESIHDFDKTIAENANSSQAHYYKARALADLKRHEEAV 1386
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
++LD + + Y G +L + +++KA + +R + + FYQ
Sbjct: 1387 GAYDLALRLDPDTADIHYYKGFSLMELAQFEKA------IPEFERTEVLTPANAMAFYQH 1440
Query: 564 ------LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
L A++ L Q + + R++ A + RGL L+ LG+++++++ L DP
Sbjct: 1441 GLALVRLERENDAIQVLDQSIALSPRYAPAQYQRGLALNSLGRYRESLESFDGALSADPQ 1500
Query: 618 NIECLYLRASCYHAIGEYREAV 639
+ +A ++G + +A+
Sbjct: 1501 LADAALQKAIALASLGRHADAL 1522
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 6/256 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A + G + A+ F+ L+ P P L +G A E AI F A+ +
Sbjct: 1609 NKGLALMAVGMHEEAVLSFNIALEILPDDPAVLYQKGLALMRLESFEDAIGAFDAALAID 1668
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
E ++G A AALG EA S AL +P++ D L+ +G+ + F+ A+ED
Sbjct: 1669 AQKTEYPYQKGLALAALGRHDEAEAAFSAALARDPDNQDALYHKGLSLAELGRFSEAIED 1728
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ V+ + + +A+ G L ++ Y A ++ KA++L+ W + + +L
Sbjct: 1729 LAKTVERNPKIANAWLIQGFCLFAVERYSDALASYDKALELETQNPHTWFYKGRTCLNLG 1788
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID---PSNIECL 622
N A+ +Q + I F +A++ G L + KK + + + P E
Sbjct: 1789 NDSDAVLAFEQAIKIVPDFGEAFYYMG---QALFRQKKLAEAAVAFEEANRLMPDFTEAF 1845
Query: 623 YLRASCYHAIGEYREA 638
+ + A+G YREA
Sbjct: 1846 QEKGRTFFALGRYREA 1861
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 119/265 (44%), Gaps = 2/265 (0%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
+ + ++ + L+R + ++ K AI + ++ + P A + RG A RE E A
Sbjct: 1872 QPRDLNATYGLARSLDRLGSAK--EAIPAYAKVNRIAPDCERAFLYRGFAHLQVREYEDA 1929
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
++ FT ++ NP+ +AW +G+A L + +A++ L +P+ IL ++G+
Sbjct: 1930 VAAFTRVVEINPANTDAWHEKGKALVVLEKYAKALEAFDGYLGQKPDDPVILCQKGLSLV 1989
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K F A+ ++ + +T L +G ++ + +A+ LD + A
Sbjct: 1990 KLDRFEDALAAFTSAIDKGMNTPGVHTEQALCFLKLGRDEEVIRSADRALALDSSETRAL 2049
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ L E+A+ V+ D +A RG+ L LG+++ A+ +L L
Sbjct: 2050 LAKGESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLVQLGRYEDAVIELDHALEN 2109
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
D +N + L + + + Y+E V
Sbjct: 2110 DATNADLLTCKGYSLYRLARYKETV 2134
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 143/652 (21%), Positives = 240/652 (36%), Gaps = 99/652 (15%)
Query: 52 WSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
+ KAIR L I D + CY+ L + ++ D+ L+ P K
Sbjct: 2436 YEKAIRSYKQALTHDGSITDAVYQTGLCYAALNKNDQALKTFDRVLETLPERADILFHKS 2495
Query: 111 CAFSALGRKEEALS--------------VWE-KGYEHALHQSADLKQFLELEELLTAAKQ 155
A L R EEAL+ VWE KG L++ ++ LE + A
Sbjct: 2496 RALFRLMRYEEALTAIDASLAIENNDVAVWEQKG--STLYELGRFEESLEAYDRSLALNP 2553
Query: 156 DRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSS-----QSRDVSET 210
D S+TC Y S+S L E + D++ ET E + + SS + E
Sbjct: 2554 D-SITCWYLKGRSLSDLARYEEAIPCFDRVIETDETCAGAWLRKGSSLLSLGKFAPAIEA 2612
Query: 211 CSKS-SHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENH---NGSSD-GSKSTH 265
++S PD NG D +G + + + + R ++ N N D G H
Sbjct: 2613 LTRSLDLQPDNANGWYD--RGIALAELKQYEDAVASYDRAIAINRKYANAWYDKGVALVH 2670
Query: 266 ASRDASEIN---RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSN 322
RD I ++ D N DK R G D +++ L S
Sbjct: 2671 LGRDTDAIQAFENTTAIDPRFMNAFYDKGLALARLGEH-------QDAVTAFDGVLAISA 2723
Query: 323 TNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVD 382
+ + ++ +S + E+ S L D+ S +
Sbjct: 2724 SFVPALTQKGLSLFQLQRYEEAASSLGAALDL----------------------NSGIFE 2761
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+G+A + G + AI+ FDQ + DP +G + Q + +AA+++F AI
Sbjct: 2762 AWYHQGLAYRHLGNVSEAIASFDQAISLDPRSFAVHYEKGLVLSGQEQWDAAVAEFRIAI 2821
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ + EA+ G A AL + EA +K +P AD + G+ + + + A
Sbjct: 2822 ECDGGKKEAYYALGLALHALEQFGEARDAFTKTAALDPGYADAHYYEGLSSEHLEQYREA 2881
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA--HLKAIQLDRNFL-----EAWG 555
V + + ++ A+ + GL+L IG + A +A H + + D + +A
Sbjct: 2882 VSSFDRTIAVIADHAMAWYHKGLSLEHIGNDEDAADAFEHARRTEPDNPAILLSLGKARS 2941
Query: 556 HLTQFYQDLANSEKALECL----------------------------QQVLYIDKRFSKA 587
L QF + + AL L Q + RF
Sbjct: 2942 RLGQFEMAIRIYDHALTLLPSDGEFLLEKGIALAHLERHEEAEVVLGQSTERLPDRFEPP 3001
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ LRGL L G++ A++ L ++ ++ + Y +A +G EAV
Sbjct: 3002 F-LRGLSLMLTGRYDDAVRSFDKALALNETDPDIWYHKAISLAHLGRAEEAV 3052
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 34/255 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG A + GK A+ +DQ L+ P P+ L +G A + + AI F A+
Sbjct: 758 FERGNALLKLGKPLEAVVSYDQALELSPDDPKILYQKGMALTQRERFDEAIRAFESALAL 817
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P G A A +AI+ A+ +P H +GI + + + A+
Sbjct: 818 EPENASGAYYLGVAYAGRERYDDAIRAFDNAIALDPTQGQAFHFKGIALVQRERYTEAIT 877
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +K D +N + YLGLA ++K A +A +LD + L+A+
Sbjct: 878 AFLSALKRDPDNPVTHYYLGLAYLQDKQFKNAIPEFSRATELDPSLLDAY---------- 927
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
YH G+ L +G+H +A+ L +P++I+ +
Sbjct: 928 ----------------------LYH--GIALAAIGRHDEAVPLFDKSLAGNPTHIDAMTA 963
Query: 625 RASCYHAIGEYREAV 639
RA + + E V
Sbjct: 964 RARSLMVLERFSEVV 978
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA G Y AI FD+ ++ D EA +G+G + + A + + +P
Sbjct: 3887 KGIALAELGMYRDAIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALDP 3946
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW R+G +A + EA++ +AL +P + RG K + AVE
Sbjct: 3947 ENAEAWTRQGMVLSAQQKFEEALEHYDRALMIDPTFSIAYFTRGSALIAMKRYQEAVEAF 4006
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A + + + AY + G AL + Y+ A +A+++D E W + +
Sbjct: 4007 DAMLHIQPDFVDAYIHKGRALQELELYQDALAVFKRALEIDPTRKECWNDIGDILDRIGK 4066
Query: 567 SEKALECLQQ 576
E+A C ++
Sbjct: 4067 HEEARICYEK 4076
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 122/256 (47%), Gaps = 4/256 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSN 445
+G A + A++ FD+ ++ DP + RG A R +EA I F +++
Sbjct: 1542 KGTALAELDRVPEALAAFDRAIEIDPANARSHFERGLVLARLGRHIEA-IQAFDQSLSLI 1600
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ +G A A+G EA+ + ALE P+ +L+++G+ + + F A+
Sbjct: 1601 PNYVPAFYNKGLALMAVGMHEEAVLSFNIALEILPDDPAVLYQKGLALMRLESFEDAIGA 1660
Query: 506 LSACVKLDKENKSAYTYL-GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
A + +D + K+ Y Y GLAL+++G + +AE A A+ D + +A H +L
Sbjct: 1661 FDAALAIDAQ-KTEYPYQKGLALAALGRHDEAEAAFSAALARDPDNQDALYHKGLSLAEL 1719
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+A+E L + + + + + A+ ++G L + ++ A+ L ++ N +
Sbjct: 1720 GRFSEAIEDLAKTVERNPKIANAWLIQGFCLFAVERYSDALASYDKALELETQNPHTWFY 1779
Query: 625 RASCYHAIGEYREAVI 640
+ +G +AV+
Sbjct: 1780 KGRTCLNLGNDSDAVL 1795
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 107/259 (41%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + +G A GK AI + + LK DP I +G A + AI F A
Sbjct: 1061 DIWMRKGDALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQGKAFFDLTRYQDAIDAFDNA 1120
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I N + EA+ +G A + AI LE +P + D +G+ D
Sbjct: 1121 ISLNQRSIEAFWYKGLALEKVNRHEGAIHVFEILLEIDPKNGDAQFHKGLALAVLGDHRD 1180
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ +++ ++ A+ G +L IG Y A A +AI+++ ++ EA+ +L
Sbjct: 1181 AIGSFDKTLQILPDSAPAWYNKGKSLIEIGRYPDAIVALKRAIEIETSYTEAFYYLGYAL 1240
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ A+E + L D + + RG+ L + ++A++ L DP N
Sbjct: 1241 LKTGDYTGAIEAFDRNLTRDGSNAPGHFNRGIALEKSRRFEEALESFDKSLIYDPGNALA 1300
Query: 622 LYLRASCYHAIGEYREAVI 640
Y + Y +G + +A
Sbjct: 1301 FYHKGKVYADLGRHADAAF 1319
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 118/287 (41%), Gaps = 35/287 (12%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A + + Y AI +FDQ L + Y EA +G A A + E AI+ F A+
Sbjct: 3684 KGLALLEQELYTEAIPVFDQALAANNRYAEAWHNKGVALARTGQHEEAIAAFNAALGIRS 3743
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD-------F 499
EA RG++ G EAI + L P +A+ E+G + F
Sbjct: 3744 DYAEALFERGRSLVHTGMFREAIASFDQVLILAPGNANAHFEKGRALIALGNHAGATAAF 3803
Query: 500 NAAVEDLSACVKLDKENKSAYTYL---------------------------GLALSSIGE 532
+ A++ +C + A TY GLA +++ +
Sbjct: 3804 DRAIDINPSCWQALAGKGRAETYQGNYDGAITALDRALEIMPKKAILHDQKGLAYAALEQ 3863
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y+ A +++ +A++++ + H +L A+E + + D ++A+ +G
Sbjct: 3864 YRDAVQSYDRALEIE-PLPRVFAHKGIALAELGMYRDAIEAFDKAIEHDGNLAEAWMGKG 3922
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + LG++ A K GL +DP N E + A ++ EA+
Sbjct: 3923 NVQYDLGKYADAEKAYERGLALDPENAEAWTRQGMVLSAQQKFEEAL 3969
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 108/247 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A + ++A A++ F++ L+ P +A +G A A Q A++ F A
Sbjct: 2221 NKGRALGSLARHAEAVAAFNRALELQPDMRDAAYRKGLALAAQYLHSDAVAAFDSAASLG 2280
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
GE W RG + L EA++ +K + P++A +G+ K AA E
Sbjct: 2281 LDQGELWYCRGTSLMQLARWQEALESFNKTIALVPDNAPAWLNKGLCLQKLNYHAAATEA 2340
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
LD + A G +L+ + ++A A + ++LD EA Y LA
Sbjct: 2341 FEKTSALDATSVPAAFGRGQSLAELDRDEEAIAAFTRTLELDSTQAEAAYLRGCAYLRLA 2400
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+A+ + +++++ RGL L G+++KAI+ L D S + +Y
Sbjct: 2401 LYTEAISSFDYTIQYAPDHAQSHYRRGLALQAQGKYEKAIRSYKQALTHDGSITDAVYQT 2460
Query: 626 ASCYHAI 632
CY A+
Sbjct: 2461 GLCYAAL 2467
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 110/258 (42%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L + IA + G++A A+ D + P +A +GTA A + A++ F A
Sbjct: 1503 DAALQKAIALASLGRHADALGAADVAIAIRPELAQAWHRKGTALAELDRVPEALAAFDRA 1562
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ +P+ + RG A LG +EAIQ ++L PN + +G+
Sbjct: 1563 IEIDPANARSHFERGLVLARLGRHIEAIQAFDQSLSLIPNYVPAFYNKGLALMAVGMHEE 1622
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
AV + +++ ++ + GLAL + ++ A A A+ +D E
Sbjct: 1623 AVLSFNIALEILPDDPAVLYQKGLALMRLESFEDAIGAFDAALAIDAQKTEYPYQKGLAL 1682
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
L ++A L D A + +GL L LG+ +AI+DL+ + +P
Sbjct: 1683 AALGRHDEAEAAFSAALARDPDNQDALYHKGLSLAELGRFSEAIEDLAKTVERNPKIANA 1742
Query: 622 LYLRASCYHAIGEYREAV 639
++ C A+ Y +A+
Sbjct: 1743 WLIQGFCLFAVERYSDAL 1760
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 4/197 (2%)
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N S EA R+G LG EAI + L P A + +GI + F A+
Sbjct: 2 NKSDAEALLRQGIELYDLGRFQEAIVMFDRGLALYPRLAKAHYFKGIALYDLGKFEDAIA 61
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA--HLKAIQLDRNFLEAWGHLTQFYQ 562
V ++ + +A+ L+ +G+ ++A EA L AI+ D EAW
Sbjct: 62 AYDMAVSIEPSDPNAWYNKAATLAQVGKNEEALEACDRLLAIRYDNA--EAWILKGIALY 119
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+L A+ L ID R +K Y+ +G+ L LG+H++AI + + I P
Sbjct: 120 ELGRFTDAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIVPGYARAY 179
Query: 623 YLRASCYHAIGEYREAV 639
Y + + +G +A+
Sbjct: 180 YNKGISLYELGNLDDAL 196
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 115/288 (39%), Gaps = 34/288 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A ++ AI F+ L +P G A A + + AI F AI +P
Sbjct: 794 KGMALTQRERFDEAIRAFESALALEPENASGAYYLGVAYAGRERYDDAIRAFDNAIALDP 853
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ G+A+ +G A EAI AL+ +P++ + G+ + K F A+ +
Sbjct: 854 TQGQAFHFKGIALVQRERYTEAITAFLSALKRDPDNPVTHYYLGLAYLQDKQFKNAIPEF 913
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKA----------EEAHLKA------------- 543
S +LD AY Y G+AL++IG + +A H+ A
Sbjct: 914 SRATELDPSLLDAYLYHGIALAAIGRHDEAVPLFDKSLAGNPTHIDAMTARARSLMVLER 973
Query: 544 -----------IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ L+ ++ W ++A+ + L I+ F++A+ +G
Sbjct: 974 FSEVVETDDRILSLNPTLIDTWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRKG 1033
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L L + + A+ S L I+P+ + + +G+ +A++
Sbjct: 1034 NALMDLNKVQDAVGAYSRALEINPALCDIWMRKGDALQQLGKTEDAIL 1081
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 4/221 (1%)
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
D+ L D AL+ +G + A E A++ F I + A + RG + LG
Sbjct: 2036 DRALALDSSETRALLAKGESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLVQLGR 2095
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
+A+ +L ALE + +AD+L +G ++ + VE L VK ++++ + G
Sbjct: 2096 YEDAVIELDHALENDATNADLLTCKGYSLYRLARYKETVEYLGKAVKRRPKDRTVLLFRG 2155
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDK 582
A +G ++ A K +D +++ W + Q +DL E AL + + +++
Sbjct: 2156 KAFLRLGRWENAYGMFDKLTAIDPKYVKGWYYKGQALLAKDL--YEDALLAFETAISLEE 2213
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ A++ +G L L +H +A+ + L + P + Y
Sbjct: 2214 TCAGAWYNKGRALGSLARHAEAVAAFNRALELQPDMRDAAY 2254
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G+ +A+A F++ D A GRG + A E AI+ FT ++
Sbjct: 2322 LNKGLCLQKLNYHAAATEAFEKTSALDATSVPAAFGRGQSLAELDRDEEAIAAFTRTLEL 2381
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + EA RG A L EAI +++ P+ A + RG+ + A+
Sbjct: 2382 DSTQAEAAYLRGCAYLRLALYTEAISSFDYTIQYAPDHAQSHYRRGLALQAQGKYEKAIR 2441
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ D A GL +++ + +A + + ++ + H ++ L
Sbjct: 2442 SYKQALTHDGSITDAVYQTGLCYAALNKNDQALKTFDRVLETLPERADILFHKSRALFRL 2501
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+AL + L I+ + +G L+ LG+ +++++ L ++P +I C YL
Sbjct: 2502 MRYEEALTAIDASLAIENNDVAVWEQKGSTLYELGRFEESLEAYDRSLALNPDSITCWYL 2561
Query: 625 RASCYHAIGEYREAV 639
+ + Y EA+
Sbjct: 2562 KGRSLSDLARYEEAI 2576
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 107/257 (41%), Gaps = 4/257 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G + G++ A++ FD ++ D A GRG + E A+ + A+++
Sbjct: 2050 LAKGESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLVQLGRYEDAVIELDHALEN 2109
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + + +G + L E ++ L KA++ P +L RG + + A
Sbjct: 2110 DATNADLLTCKGYSLYRLARYKETVEYLGKAVKRRPKDRTVLLFRGKAFLRLGRWENAYG 2169
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+D + + Y G AL + Y+ A A AI L+ AW + + L
Sbjct: 2170 MFDKLTAIDPKYVKGWYYKGQALLAKDLYEDALLAFETAISLEETCAGAWYNKGRALGSL 2229
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK--DLSSGLGIDPSNIECL 622
A +A+ + L + A + +GL L H A+ D ++ LG+D E
Sbjct: 2230 ARHAEAVAAFNRALELQPDMRDAAYRKGLALAAQYLHSDAVAAFDSAASLGLDQG--ELW 2287
Query: 623 YLRASCYHAIGEYREAV 639
Y R + + ++EA+
Sbjct: 2288 YCRGTSLMQLARWQEAL 2304
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 102/250 (40%), Gaps = 8/250 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA--AISDFTEAIQSNPSAGEAW 452
G+Y A + F+Q+L P A G AR+ R A AI + + + P A+
Sbjct: 1856 GRYREAAAAFEQVLAMQPRDLNATYG--LARSLDRLGSAKEAIPAYAKVNRIAPDCERAF 1913
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG A + E +A+ ++ +E P + D HE+G + + A+E +
Sbjct: 1914 LYRGFAHLQVREYEDAVAAFTRVVEINPANTDAWHEKGKALVVLEKYAKALEAFDGYLGQ 1973
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF--YQDLANSEKA 570
++ GL+L + ++ A A AI D+ H Q + L E+
Sbjct: 1974 KPDDPVILCQKGLSLVKLDRFEDALAAFTSAI--DKGMNTPGVHTEQALCFLKLGRDEEV 2031
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
+ + L +D ++A +G L LG+H++A+ + D N R
Sbjct: 2032 IRSADRALALDSSETRALLAKGESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLV 2091
Query: 631 AIGEYREAVI 640
+G Y +AVI
Sbjct: 2092 QLGRYEDAVI 2101
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 106/259 (40%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
++ +G+A G++ A + F L DP +AL +G + A AI D +
Sbjct: 1672 TEYPYQKGLALAALGRHDEAEAAFSAALARDPDNQDALYHKGLSLAELGRFSEAIEDLAK 1731
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
++ NP AW +G A+ +A+ KALE E + +G + +
Sbjct: 1732 TVERNPKIANAWLIQGFCLFAVERYSDALASYDKALELETQNPHTWFYKGRTCLNLGNDS 1791
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
AV +K+ + A+ Y+G AL + +A A +A +L +F EA+ +
Sbjct: 1792 DAVLAFEQAIKIVPDFGEAFYYMGQALFRQKKLAEAAVAFEEANRLMPDFTEAFQEKGRT 1851
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+ L +A +QVL + R A + L LG K+AI + I P
Sbjct: 1852 FFALGRYREAAAAFEQVLAMQPRDLNATYGLARSLDRLGSAKEAIPAYAKVNRIAPDCER 1911
Query: 621 CLYLRASCYHAIGEYREAV 639
R + + EY +AV
Sbjct: 1912 AFLYRGFAHLQVREYEDAV 1930
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 110/605 (18%), Positives = 212/605 (35%), Gaps = 96/605 (15%)
Query: 97 QLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQD 156
+L P +A+ KG F ALGR EA + +E+ A Q
Sbjct: 1836 RLMPDFTEAFQEKGRTFFALGRYREAAAAFEQ----------------------VLAMQP 1873
Query: 157 RSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSS--QSRDVSETCSKS 214
R + Y ++ S+ L ++ + A K++ + + ++ + + Q R+ + +
Sbjct: 1874 RDLNATYGLARSLDRLGSAKEAIPAYAKVNRIAPDCERAFLYRGFAHLQVREYEDAVAAF 1933
Query: 215 SHDPDLCNGRSD--EAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASE 272
+ ++ +D KG + V + K K E + + G + S
Sbjct: 1934 TRVVEINPANTDAWHEKGKALVVLEKYA-----KALEAFDGYLGQKPDDPVILCQKGLSL 1988
Query: 273 INRQSSDD-FDICNGPIDKASVNERHGRQTNGTHDVHD----KLSSDSASLNDSNT---- 323
+ +D IDK G T G H KL D + ++
Sbjct: 1989 VKLDRFEDALAAFTSAIDK-------GMNTPGVHTEQALCFLKLGRDEEVIRSADRALAL 2041
Query: 324 -NSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNE-AKRNKKFCVTRISKSK---- 377
+SE+ + + ++ + + +F + ++ N+ A+R + + ++ + +
Sbjct: 2042 DSSETRALLAKGESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLVQLGRYEDAVI 2101
Query: 378 ---------SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+ + D +G + +Y + + +K P L+ RG A
Sbjct: 2102 ELDHALENDATNADLLTCKGYSLYRLARYKETVEYLGKAVKRRPKDRTVLLFRGKAFLRL 2161
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAA--------------------------- 461
E A F + +P + W +GQA A
Sbjct: 2162 GRWENAYGMFDKLTAIDPKYVKGWYYKGQALLAKDLYEDALLAFETAISLEETCAGAWYN 2221
Query: 462 -------LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
L EA+ ++ALE +P+ D + +G+ + AV + L
Sbjct: 2222 KGRALGSLARHAEAVAAFNRALELQPDMRDAAYRKGLALAAQYLHSDAVAAFDSAASLGL 2281
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L + +++A E+ K I L + AW + Q L A E
Sbjct: 2282 DQGELWYCRGTSLMQLARWQEALESFNKTIALVPDNAPAWLNKGLCLQKLNYHAAATEAF 2341
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ +D A RG L L + ++AI + L +D + E YLR Y +
Sbjct: 2342 EKTSALDATSVPAAFGRGQSLAELDRDEEAIAAFTRTLELDSTQAEAAYLRGCAYLRLAL 2401
Query: 635 YREAV 639
Y EA+
Sbjct: 2402 YTEAI 2406
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 77 FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
Y Q + K+ I + +A +LDP+LL AY+ G A +A+GR +EA+ +++K
Sbjct: 898 LAYLQDKQFKNAIPEFSRATELDPSLLDAYLYHGIALAAIGRHDEAVPLFDK 949
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 105/281 (37%), Gaps = 18/281 (6%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
TR+ + + D +G A V KYA A+ FD L + P P L +G +
Sbjct: 1932 AFTRVVEINPANTDAWHEKGKALVVLEKYAKALEAFDGYLGQKPDDPVILCQKGLSLVKL 1991
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E A++ FT AI + + LG E I+ +AL + + L
Sbjct: 1992 DRFEDALAAFTSAIDKGMNTPGVHTEQALCFLKLGRDEEVIRSADRALALDSSETRALLA 2051
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G + AV + D EN A G++L +G Y+ A I+LD
Sbjct: 2052 KGESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLVQLGRYEDA------VIELDH 2105
Query: 549 ---------NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ L G+ Y+ LA ++ +E L + + + RG LG
Sbjct: 2106 ALENDATNADLLTCKGY--SLYR-LARYKETVEYLGKAVKRRPKDRTVLLFRGKAFLRLG 2162
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ + A IDP ++ Y + A Y +A++
Sbjct: 2163 RWENAYGMFDKLTAIDPKYVKGWYYKGQALLAKDLYEDALL 2203
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/253 (16%), Positives = 107/253 (42%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G++ G+++ AI + ++ +P A + +G A++ + +A++
Sbjct: 1712 KGLSLAELGRFSEAIEDLAKTVERNPKIANAWLIQGFCLFAVERYSDALASYDKALELET 1771
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
W +G+ LG +A+ +A++ P+ + + G F+ K A
Sbjct: 1772 QNPHTWFYKGRTCLNLGNDSDAVLAFEQAIKIVPDFGEAFYYMGQALFRQKKLAEAAVAF 1831
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+L + A+ G ++G Y++A A + + + L A L + L +
Sbjct: 1832 EEANRLMPDFTEAFQEKGRTFFALGRYREAAAAFEQVLAMQPRDLNATYGLARSLDRLGS 1891
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+++A+ +V I +A+ RG + +++ A+ + + I+P+N + + +
Sbjct: 1892 AKEAIPAYAKVNRIAPDCERAFLYRGFAHLQVREYEDAVAAFTRVVEINPANTDAWHEKG 1951
Query: 627 SCYHAIGEYREAV 639
+ +Y +A+
Sbjct: 1952 KALVVLEKYAKAL 1964
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 12 RLNKTHKTICEIDELVRV--DSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QSYE 68
RL + I D+ +RV D A + AR SL + + I + LA Q
Sbjct: 3180 RLKRHKDAIHAFDQAIRVRPDYFDAHEVRAR----SFDSLGDPKETIDAYNRALALQPMH 3235
Query: 69 IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
+ + + +LE ++ I+ D+AL++DP A KG A SALG EA+ ++K
Sbjct: 3236 VPSLHRKGVALIRLERYEEAIKVFDRALEIDPACADAIYDKGRALSALGMYREAVKTYDK 3295
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
+A C+ +L + VIR D+AL LD + +A + KG + + LGR EEA++ ++
Sbjct: 2018 QALCFLKLGRDEEVIRSADRALALDSSETRALLAKGESLARLGRHEEAVAAFD 2070
>gi|282899497|ref|ZP_06307462.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281195604|gb|EFA70536.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 280
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 116/225 (51%), Gaps = 9/225 (4%)
Query: 364 RNKKFCVTRI--------SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
RN+ VT I ++ S + +F L +G Q + G + +AI+ + + + + Y
Sbjct: 35 RNQDLLVTEIGVNPPKRPTRKTSGAGEFYL-QGQNQHSRGNFQAAIAAYSKSISLNSDYA 93
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A RG A E AI+D+ +++Q NP+ E + RG ARA+LG+ AI+D ++A
Sbjct: 94 PAFKARGLAYFDLNNKERAINDYNQSLQINPNDPETYNYRGNARASLGDQKGAIEDYNEA 153
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ PN A+ + RG + + NAA+ED + +++D+ AY G A SS+G K
Sbjct: 154 IRLSPNYAEAFNNRGNSHAAQGNKNAALEDYTQAIRIDQNYSVAYNNRGNAYSSLGNTSK 213
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
A + +AI+L+ F A+ + + + +AL+ LQ+ I
Sbjct: 214 AIADYNQAIRLNPQFAPAYNNRGNAFASSGDKRRALQDLQKAATI 258
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+AAI+ ++++I N A+K RG A L AI D +++L+ PN + + RG
Sbjct: 75 FQAAIAAYSKSISLNSDYAPAFKARGLAYFDLNNKERAINDYNQSLQINPNDPETYNYRG 134
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D A+ED + ++L A+ G + ++ G A E + +AI++D+N+
Sbjct: 135 NARASLGDQKGAIEDYNEAIRLSPNYAEAFNNRGNSHAAQGNKNAALEDYTQAIRIDQNY 194
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A+ + Y L N+ KA+ Q + ++ +F+ AY+ RG G ++A++DL
Sbjct: 195 SVAYNNRGNAYSSLGNTSKAIADYNQAIRLNPQFAPAYNNRGNAFASSGDKRRALQDL 252
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AGE + +GQ + + G AI SK++ + A RG+ F + A+ D
Sbjct: 58 GAGEFY-LQGQNQHSRGNFQAAIAAYSKSISLNSDYAPAFKARGLAYFDLNNKERAINDY 116
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++++ + Y Y G A +S+G+ K A E + +AI+L N+ EA+ + + N
Sbjct: 117 NQSLQINPNDPETYNYRGNARASLGDQKGAIEDYNEAIRLSPNYAEAFNNRGNSHAAQGN 176
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
ALE Q + ID+ +S AY+ RG LG KAI D + + ++P R
Sbjct: 177 KNAALEDYTQAIRIDQNYSVAYNNRGNAYSSLGNTSKAIADYNQAIRLNPQFAPAYNNRG 236
Query: 627 SCYHAIGEYREAV 639
+ + + G+ R A+
Sbjct: 237 NAFASSGDKRRAL 249
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 11/126 (8%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITAR-----IELAKLCSLRNWSKAIRILDSL 62
++R L I + +E +R+ A A R + K +L ++++AIRI
Sbjct: 135 NARASLGDQKGAIEDYNEAIRLSPNYAEAFNNRGNSHAAQGNKNAALEDYTQAIRI---- 190
Query: 63 LAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
Q+Y + NR YS L I D ++A++L+P AY +G AF++ G K A
Sbjct: 191 -DQNYSVA-YNNRGNAYSSLGNTSKAIADYNQAIRLNPQFAPAYNNRGNAFASSGDKRRA 248
Query: 123 LSVWEK 128
L +K
Sbjct: 249 LQDLQK 254
>gi|170744697|ref|YP_001773352.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
gi|168198971|gb|ACA20918.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
Length = 839
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 121/269 (44%), Gaps = 1/269 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TR K +D +RGIA G Y A++ Q L+ DP L RG A + E
Sbjct: 75 TRALDRKPGFLDALRNRGIAWQMLGDYDRAVADLTQALRLDPRSAATLNARGAALLSKEE 134
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+DFT AI P A+ RG A A + A+ D + + +PN R
Sbjct: 135 YDRAITDFTAAIAREPGFFRAFANRGLAHLAKRQLDRALDDFNALIRLQPNEPIGYENRA 194
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ +F+ A+ D + ++L N AY+ G A GE ++A H +A++L R
Sbjct: 195 ALLIDRGEFDGAIADYNTAIRLRPRNWQAYSQRGEAWRLKGEVQRALADHDRAVELGRT- 253
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
EA+ + + ++AL + L + RF+ A RG +L G+ +AI DL+
Sbjct: 254 PEAYTNRALVLKQTGQLDRALADCDEALLHNPRFALALANRGEILRLRGEVGRAIDDLTR 313
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++P + L R Y G+ A+
Sbjct: 314 AIALNPKSPVALTFRGDAYRQAGQPDRAI 342
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ RG A+ G+ A++D ++AL+ +P D L RGI D++ AV DL+ ++
Sbjct: 54 YNNRGVAKVQAGDQRGAVEDFTRALDRKPGFLDALRNRGIAWQMLGDYDRAVADLTQALR 113
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
LD + + G AL S EY +A AI + F A+ + + ++AL
Sbjct: 114 LDPRSAATLNARGAALLSKEEYDRAITDFTAAIAREPGFFRAFANRGLAHLAKRQLDRAL 173
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+ ++ + Y R LL G+ AI D ++ + + P N + R +
Sbjct: 174 DDFNALIRLQPNEPIGYENRAALLIDRGEFDGAIADYNTAIRLRPRNWQAYSQRGEAWRL 233
Query: 632 IGEYREAV 639
GE + A+
Sbjct: 234 KGEVQRAL 241
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 33/202 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + + + A+ F+ +++ P P R + E + AI+D+ AI+
Sbjct: 158 NRGLAHLAKRQLDRALDDFNALIRLQPNEPIGYENRAALLIDRGEFDGAIADYNTAIRLR 217
Query: 446 P-------SAGEAWKRRGQARAAL--------------------------GESVEAIQDL 472
P GEAW+ +G+ + AL G+ A+ D
Sbjct: 218 PRNWQAYSQRGEAWRLKGEVQRALADHDRAVELGRTPEAYTNRALVLKQTGQLDRALADC 277
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+AL P A L RG + + A++DL+ + L+ ++ A T+ G A G+
Sbjct: 278 DEALLHNPRFALALANRGEILRLRGEVGRAIDDLTRAIALNPKSPVALTFRGDAYRQAGQ 337
Query: 533 YKKAEEAHLKAIQLDRNFLEAW 554
+A + +A++ +F+ A+
Sbjct: 338 PDRAIADYDEALRAVPDFVAAF 359
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + G+ A++ D+ L +P + AL RG + E+ AI D T AI N
Sbjct: 259 NRALVLKQTGQLDRALADCDEALLHNPRFALALANRGEILRLRGEVGRAIDDLTRAIALN 318
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A RG A G+ AI D +AL P+ RG+ + + + A D
Sbjct: 319 PKSPVALTFRGDAYRQAGQPDRAIADYDEALRAVPDFVAAFAGRGLAREQRGEASLARAD 378
Query: 506 LSACVKLDKENKSAYTYLGLALS 528
+ L + +A AL+
Sbjct: 379 FERAMGLSPDRDAALARPAQALA 401
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
PEA R +L+ A++D EA+ NP A RG+ GE AI DL++
Sbjct: 254 PEAYTNRALVLKQTGQLDRALADCDEALLHNPRFALALANRGEILRLRGEVGRAIDDLTR 313
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+ P S L RG + + A+ D ++ + +A+ GLA GE
Sbjct: 314 AIALNPKSPVALTFRGDAYRQAGQPDRAIADYDEALRAVPDFVAAFAGRGLAREQRGEAS 373
Query: 535 KAEEAHLKAIQL 546
A +A+ L
Sbjct: 374 LARADFERAMGL 385
>gi|411120171|ref|ZP_11392547.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410710327|gb|EKQ67838.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 272
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 34/267 (12%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
++ + I V F +G+ + Y +AI+ +D +L P YP+A RG A E
Sbjct: 1 MADFREIEVVFLFQKGLYLNRQHDYVAAIASYDAVLNRQPDYPDAWYNRGNAFYRLGHYE 60
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+ + +A++ P EAW RG A L EAI +A++F+P+ + RGI
Sbjct: 61 EAIASYDQALEYEPGFSEAWNNRGSALDDLQRYAEAIASYDQAIKFKPSYCWAWYNRGI- 119
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
AL ++ Y++A +++ +AI+ ++
Sbjct: 120 ---------------------------------ALRNLNRYEEAIDSYDRAIEFKPDYYW 146
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
AW + + L ++ + + L F +A+ RG L+ LGQ + AI L
Sbjct: 147 AWYNRALVLKQLGRLQQVVASYDKALEFKPDFEEAWTNRGNALYHLGQLEAAISSYDKAL 206
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAV 639
+ P N LY +A CY G+Y A
Sbjct: 207 ELRPDNPNTLYNKACCYALQGKYELAF 233
>gi|338810665|ref|ZP_08622906.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
gi|337277347|gb|EGO65743.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
Length = 329
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 116/248 (46%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I+ + +G A +G Y AI+ + Q++ PE RG + + + AI+D+
Sbjct: 39 ITAEQWYQQGTAYAAQGDYDHAIAAYSQVIALQLQVPETYNSRGIVYIKKGDYDRAIADY 98
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+AI NP A+ RG A A G +AI D S+A+ P +A + RG K
Sbjct: 99 DQAIALNPKFASAYNNRGVAYYAKGHYDQAIADHSQAVALNPKNAGAYYNRGNAYGKNDQ 158
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
++ A+ D + + L+ ++ +AY G+ G+Y +A + H +AI L+ A+ +
Sbjct: 159 YDRAIADYTQAIALNPKHVAAYDNRGMLYKKKGQYDQAIDDHTQAIALEPKRATAYNNRG 218
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
Y +A+ Q + ++ + + AY+ RG+ G + +AI + + +DP
Sbjct: 219 IAYTKKGQYNRAIADFDQAILLNPKDAMAYYNRGITYADKGDYTRAIVTYNRAIALDPHY 278
Query: 619 IECLYLRA 626
E Y +A
Sbjct: 279 AEAYYQKA 286
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRGI + +G Y AI+ +DQ + +P + A RG A + + AI+D ++A+ N
Sbjct: 80 SRGIVYIKKGDYDRAIADYDQAIALNPKFASAYNNRGVAYYAKGHYDQAIADHSQAVALN 139
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + AI D ++A+ P RG++ K ++ A++D
Sbjct: 140 PKNAGAYYNRGNAYGKNDQYDRAIADYTQAIALNPKHVAAYDNRGMLYKKKGQYDQAIDD 199
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ + +AY G+A + G+Y +A +AI L+ A+ + Y D
Sbjct: 200 HTQAIALEPKRATAYNNRGIAYTKKGQYNRAIADFDQAILLNPKDAMAYYNRGITYADKG 259
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ +A+ + + +D +++AY+ + +
Sbjct: 260 DYTRAIVTYNRAIALDPHYAEAYYQKAV 287
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +Y AI+ + Q + +P + A RG + + + AI D T+AI
Sbjct: 148 NRGNAYGKNDQYDRAIADYTQAIALNPKHVAAYDNRGMLYKKKGQYDQAIDDHTQAIALE 207
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A G+ AI D +A+ P A + RGI D+ A+
Sbjct: 208 PKRATAYNNRGIAYTKKGQYNRAIADFDQAILLNPKDAMAYYNRGITYADKGDYTRAIVT 267
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ + LD AY +A G +A E++ K I
Sbjct: 268 YNRAIALDPHYAEAYYQKAVACEKAGRLPEAAESYHKFI 306
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA +G+Y AI+ FDQ + +P A RG A + + AI + AI +
Sbjct: 216 NRGIAYTKKGQYNRAIADFDQAILLNPKDAMAYYNRGITYADKGDYTRAIVTYNRAIALD 275
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
P EA+ ++ A G EA + K + +
Sbjct: 276 PHYAEAYYQKAVACEKAGRLPEAAESYHKFILY 308
>gi|431895643|gb|ELK05069.1| Tetratricopeptide repeat protein 13 [Pteropus alecto]
Length = 465
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 100/183 (54%), Gaps = 1/183 (0%)
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q + LG EA+ DL++A++ +P SA + RG + F +D+ A ED ++L++
Sbjct: 3 QILSPLGRISEAVSDLTRAIQLQP-SARLYRHRGTLYFMSEDYATAHEDPQLSLELNRNQ 61
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A Y GL G K+A E+ +A++ +F++A+ L Q Y++L N E A E Q+
Sbjct: 62 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 121
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +D+ + LRG+LL+ G + A++ L ++P N C Y++ + A+G++
Sbjct: 122 ALLLDQNHVQTLQLRGVLLYHHGSLRGALRSFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 181
Query: 637 EAV 639
E V
Sbjct: 182 EGV 184
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P A++ +G + L+ AI F EA++ +A+K GQA LG A + K
Sbjct: 62 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 121
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
AL + N L RG++ + A+ C++L+ N+ GL+ ++G++
Sbjct: 122 ALLLDQNHVQTLQLRGVLLYHHGSLRGALRSFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 181
Query: 535 KAEEAHLKAI 544
+ +A K +
Sbjct: 182 EGVKAQTKVM 191
>gi|425470454|ref|ZP_18849324.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis aeruginosa PCC
9701]
gi|389883930|emb|CCI35726.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis aeruginosa PCC
9701]
Length = 282
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG A N G++ AI+ +D+ L+ P Y EA RG A R E AI+ + A++
Sbjct: 24 GRGFALGNLGRFEEAIASYDRTLEFKPDYHEAWYNRGVALGNLRRFEEAIASYDRALEIK 83
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG EAI +ALEF+P+ + H RGI F A+
Sbjct: 84 PDDPDAWYGRGVALGNLGRFEEAIASWDRALEFKPDYHEAWHNRGIALRNLGRFEQAIAS 143
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G+AL ++G +++A + +A+++ + EAW +
Sbjct: 144 WDRALEFKPDYPDAWNNRGVALGNLGRFEEAIASCDRALEIKPDLHEAWDSRGAALTFMG 203
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK-AIKDLSSGLGID 615
+ ALE + I+ ++ AY+ + +GL + + AI++L + +D
Sbjct: 204 RYKDALESYDHAIKINSNYANAYYNKA-CCYGLQNNVELAIENLQRAINLD 253
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ +D+ L+ P Y +A GRG A E AI+ + ++ P EAW RG A
Sbjct: 4 AIASYDRALEIKPDYHQAWYGRGFALGNLGRFEEAIASYDRTLEFKPDYHEAWYNRGVAL 63
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L EAI +ALE +P+ D + RG+ F A+ ++ + A
Sbjct: 64 GNLRRFEEAIASYDRALEIKPDDPDAWYGRGVALGNLGRFEEAIASWDRALEFKPDYHEA 123
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G+AL ++G +++A + +A++ ++ +AW + +L E+A+ + L
Sbjct: 124 WHNRGIALRNLGRFEQAIASWDRALEFKPDYPDAWNNRGVALGNLGRFEEAIASCDRALE 183
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
I +A+ RG L +G++K A++ + I+ + Y +A CY
Sbjct: 184 IKPDLHEAWDSRGAALTFMGRYKDALESYDHAIKINSNYANAYYNKACCY 233
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 101/199 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N ++ AI+ +D+ L+ P P+A GRG A E AI+ + A++
Sbjct: 58 NRGVALGNLRRFEEAIASYDRALEIKPDDPDAWYGRGVALGNLGRFEEAIASWDRALEFK 117
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG +AI +ALEF+P+ D + RG+ F A+
Sbjct: 118 PDYHEAWHNRGIALRNLGRFEQAIASWDRALEFKPDYPDAWNNRGVALGNLGRFEEAIAS 177
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G AL+ +G YK A E++ AI+++ N+ A+ + Y
Sbjct: 178 CDRALEIKPDLHEAWDSRGAALTFMGRYKDALESYDHAIKINSNYANAYYNKACCYGLQN 237
Query: 566 NSEKALECLQQVLYIDKRF 584
N E A+E LQ+ + +D +
Sbjct: 238 NVELAIENLQRAINLDVEY 256
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 103/209 (49%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E AI+ + A++ P +AW RG A LG EAI + LEF+P+ + + RG
Sbjct: 1 MEEAIASYDRALEIKPDYHQAWYGRGFALGNLGRFEEAIASYDRTLEFKPDYHEAWYNRG 60
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + F A+ +++ ++ A+ G+AL ++G +++A + +A++ ++
Sbjct: 61 VALGNLRRFEEAIASYDRALEIKPDDPDAWYGRGVALGNLGRFEEAIASWDRALEFKPDY 120
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
EAW + ++L E+A+ + L + A++ RG+ L LG+ ++AI
Sbjct: 121 HEAWHNRGIALRNLGRFEQAIASWDRALEFKPDYPDAWNNRGVALGNLGRFEEAIASCDR 180
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P E R + +G Y++A+
Sbjct: 181 ALEIKPDLHEAWDSRGAALTFMGRYKDAL 209
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L + +AI D L + D N R L + I CD+AL++ P L +
Sbjct: 131 LRNLGRFEQAIASWDRALEFKPDYPDAWNNRGVALGNLGRFEEAIASCDRALEIKPDLHE 190
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHAL 134
A+ +G A + +GR ++AL + Y+HA+
Sbjct: 191 AWDSRGAALTFMGRYKDAL----ESYDHAI 216
>gi|73670356|ref|YP_306371.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
str. Fusaro]
gi|72397518|gb|AAZ71791.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
str. Fusaro]
Length = 397
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 129/262 (49%), Gaps = 9/262 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ ++QV GKY A+ +++ L+ P YP A G+ + + +AAI + + ++
Sbjct: 124 MAFSLSQV--GKYDEAVKAYEKALELRPDYPNAWYGKALNLSQAGDYKAAIEAYEKVLEE 181
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N EAW +G A +G+ EAI KA+E +PN A+ H +G+ + A++
Sbjct: 182 NSDYKEAWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEAWHYKGVDMDSLGSYRQALK 241
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
V+LD EN A+ +G+ L ++ +Y +A +A KAI+++ + W + +
Sbjct: 242 AYQKTVELDPENDDAWNNMGIDLENLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQM 301
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+A E ++ +D + +AY G +L L + ++++ L ++P + +
Sbjct: 302 QRFEEAAETYRKATQLDPEYLEAYSSLGFVLAQLRRFAESLEIYEQALKLNPEAADSWFG 361
Query: 625 RASCYHAIG-------EYREAV 639
+A C +G YR+AV
Sbjct: 362 KAVCLSFLGREEEAEEAYRKAV 383
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 117/227 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y +AI ++++L+E+ Y EA +G+G A + + AI + +AI+ +P+ EAW
Sbjct: 166 GDYKAAIEAYEKVLEENSDYKEAWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEAWHY 225
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G +LG +A++ K +E +P + D + GI + ++ A++ ++++
Sbjct: 226 KGVDMDSLGSYRQALKAYQKTVELDPENDDAWNNMGIDLENLEKYDEAIKAFDKAIEINS 285
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN + G LS + +++A E + KA QLD +LEA+ L L ++LE
Sbjct: 286 ENADVWYNKGFTLSQMQRFEEAAETYRKATQLDPEYLEAYSSLGFVLAQLRRFAESLEIY 345
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+Q L ++ + ++ + + L LG+ ++A + + IDP E
Sbjct: 346 EQALKLNPEAADSWFGKAVCLSFLGREEEAEEAYRKAVEIDPRYAEV 392
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 119/244 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + A+ FD+ ++ DP + L + A + + A+ + +AI+ N + W
Sbjct: 64 GNFNEAMKAFDKAIEIDPDNIDLLNNKAQALETVGKYDEALGFYEKAIKINAEDPDIWNN 123
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ + +G+ EA++ KALE P+ + + + + + D+ AA+E ++ +
Sbjct: 124 MAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKALNLSQAGDYKAAIEAYEKVLEENS 183
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ K A+ G+AL +G+Y +A A+ KAI+LD NF EAW + L + +AL+
Sbjct: 184 DYKEAWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEAWHYKGVDMDSLGSYRQALKAY 243
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q+ + +D A++ G+ L L ++ +AIK + I+ N + Y + +
Sbjct: 244 QKTVELDPENDDAWNNMGIDLENLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQMQR 303
Query: 635 YREA 638
+ EA
Sbjct: 304 FEEA 307
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 92/177 (51%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G EA++ KA+E +P++ D+L+ + ++ A+ +K++ E+ +
Sbjct: 64 GNFNEAMKAFDKAIEIDPDNIDLLNNKAQALETVGKYDEALGFYEKAIKINAEDPDIWNN 123
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
+ +LS +G+Y +A +A+ KA++L ++ AW + + A+E ++VL +
Sbjct: 124 MAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKALNLSQAGDYKAAIEAYEKVLEENS 183
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +A+ +G+ L +G++ +AI + +DP+ E + + ++G YR+A+
Sbjct: 184 DYKEAWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEAWHYKGVDMDSLGSYRQAL 240
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 72/155 (46%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+E G+ +FN A++ +++D +N AL ++G+Y +A + KAI+
Sbjct: 53 LNEYGLDFLSCGNFNEAMKAFDKAIEIDPDNIDLLNNKAQALETVGKYDEALGFYEKAIK 112
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + W ++ + ++A++ ++ L + + A++ + L L G +K AI
Sbjct: 113 INAEDPDIWNNMAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKALNLSQAGDYKAAI 172
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ L + E + +G+Y EA+I
Sbjct: 173 EAYEKVLEENSDYKEAWVGKGIALGQMGKYDEAII 207
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L + +AI+ D + + E D+ N+ F SQ++ + KA QLDP L+
Sbjct: 264 LENLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQMQRFEEAAETYRKATQLDPEYLE 323
Query: 105 AYILKGCAFSALGRKEEALSVWEK 128
AY G + L R E+L ++E+
Sbjct: 324 AYSSLGFVLAQLRRFAESLEIYEQ 347
>gi|223938532|ref|ZP_03630424.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223892794|gb|EEF59263.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 432
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 116/261 (44%), Gaps = 41/261 (15%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + +G + I+ ++++ P Y EA G A + AI+++T AIQ
Sbjct: 100 ARALVYRLKGDVQNQINDLNEVIDLKPTYAEAHYQLGMAYVSLKNYSQAITNYTIAIQIK 159
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS G+ + RRG+A +A++D ++AL PN RG + KD+ A+ D
Sbjct: 160 PSEGDYYTRRGRAHWYNKAEQDALKDFAEALRLNPNDEVAYAFRGQLYLDKKDYPLAIRD 219
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ N+ +Y Y G A G Y+KA + AIQL N E
Sbjct: 220 FTKSTDLNPTNELSYEYRGWAYYKSGAYEKAISDYSSAIQL--NPAE------------- 264
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
S AY RGL G+ +KAI D S G+ ++P+N+ L+ R
Sbjct: 265 -------------------SAAYGSRGLAYEKSGELEKAIADYSRGIKLNPTNVIALHAR 305
Query: 626 ASCYH-------AIGEYREAV 639
A+ YH I +YREA+
Sbjct: 306 AAAYHKQGKFDRVIEDYREAI 326
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFN 500
++ +P A++ RG A + G+ + A+ D+ K ++ +P++ R +V ++ K D
Sbjct: 54 LELDPQDSYAYRHRGWAFSRKGDFLHALADMDKLVKLDPSNPWSYAARALV-YRLKGDVQ 112
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
+ DL+ + L A+ LG+A S+ Y +A + AIQ+ + + + +
Sbjct: 113 NQINDLNEVIDLKPTYAEAHYQLGMAYVSLKNYSQAITNYTIAIQIKPSEGDYYTRRGRA 172
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+ + AL+ + L ++ AY RG L + AI+D + ++P+N
Sbjct: 173 HWYNKAEQDALKDFAEALRLNPNDEVAYAFRGQLYLDKKDYPLAIRDFTKSTDLNPTNEL 232
Query: 621 CLYLRASCYHAIGEYREAV 639
R Y+ G Y +A+
Sbjct: 233 SYEYRGWAYYKSGAYEKAI 251
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D+ RG A A+ F + L+ +P A RG +++ AI DFT++
Sbjct: 164 DYYTRRGRAHWYNKAEQDALKDFAEALRLNPNDEVAYAFRGQLYLDKKDYPLAIRDFTKS 223
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
NP+ +++ RG A G +AI D S A++ P + RG+ K +
Sbjct: 224 TDLNPTNELSYEYRGWAYYKSGAYEKAISDYSSAIQLNPAESAAYGSRGLAYEKSGELEK 283
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
A+ D S +KL+ N A A G++ + E + +AI+
Sbjct: 284 AIADYSRGIKLNPTNVIALHARAAAYHKQGKFDRVIEDYREAIK 327
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 68/136 (50%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
SAD +H+ +K D++ +E SA ++LD ++ AY + G A S G++ A
Sbjct: 26 SADNMHQAIEEAWKHHDYDLTIERCSAILELDPQDSYAYRHRGWAFSRKGDFLHALADMD 85
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
K ++LD + ++ Y+ + + + L +V+ + +++A++ G+ L +
Sbjct: 86 KLVKLDPSNPWSYAARALVYRLKGDVQNQINDLNEVIDLKPTYAEAHYQLGMAYVSLKNY 145
Query: 602 KKAIKDLSSGLGIDPS 617
+AI + + + I PS
Sbjct: 146 SQAITNYTIAIQIKPS 161
>gi|440752492|ref|ZP_20931695.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440176985|gb|ELP56258.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 801
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +D+ L+ P Y EA RG A E AI+ + A++ P EAW R
Sbjct: 487 QYQEAIASYDKALEIKPDYHEAWNNRGNALDDLGRFEQAIASYDRALEMKPDYHEAWNNR 546
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG EAI KALEF+P+ + + RG F F A+ ++ +
Sbjct: 547 GNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFKPD 606
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G AL ++G +++ ++ +A+++ + EAW + +L E+A+
Sbjct: 607 YHQAWYNRGNALGNLGRFEEEIASYDRALEIKPDKHEAWNNRGVALGNLGRLEEAIASYD 666
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ L +A++ RG L LG+ +AI L P E Y R + +G +
Sbjct: 667 RALEFKPDDHEAWYNRGNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRF 726
Query: 636 REAV 639
EA+
Sbjct: 727 EEAI 730
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ F++++ P + + +GT + + + AI+ + +A++ P EAW R
Sbjct: 453 RYQDALKGFNRLVSLLPQWEDGWFYQGTTFYYLEQYQEAIASYDKALEIKPDYHEAWNNR 512
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG +AI +ALE +P+ + + RG F A+ ++ +
Sbjct: 513 GNALDDLGRFEQAIASYDRALEMKPDYHEAWNNRGNALFNLGRLAEAIASYDKALEFKPD 572
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSE 568
A+ G AL ++G +++A ++ +A++ ++ +AW G+L +F +++A+ +
Sbjct: 573 YHEAWYNRGNALFNLGRFEEAIASYDRALEFKPDYHQAWYNRGNALGNLGRFEEEIASYD 632
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
+ALE I +A++ RG+ L LG+ ++AI L P + E Y R +
Sbjct: 633 RALE-------IKPDKHEAWNNRGVALGNLGRLEEAIASYDRALEFKPDDHEAWYNRGNA 685
Query: 629 YHAIGEYREAV 639
+G EA+
Sbjct: 686 LFNLGRLAEAI 696
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 114/244 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G++ AI+ +D+ L+ P Y EA RG A L AI+ + +A++
Sbjct: 511 NRGNALDDLGRFEQAIASYDRALEMKPDYHEAWNNRGNALFNLGRLAEAIASYDKALEFK 570
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALEF+P+ + RG F +
Sbjct: 571 PDYHEAWYNRGNALFNLGRFEEAIASYDRALEFKPDYHQAWYNRGNALGNLGRFEEEIAS 630
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G+AL ++G ++A ++ +A++ + EAW + +L
Sbjct: 631 YDRALEIKPDKHEAWNNRGVALGNLGRLEEAIASYDRALEFKPDDHEAWYNRGNALFNLG 690
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+A+ + L + +A++ RG L LG+ ++AI L + + Y +
Sbjct: 691 RLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFNSNYANAYYNK 750
Query: 626 ASCY 629
A CY
Sbjct: 751 ACCY 754
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G++ AI+ +D+ L+ P Y +A RG A E I+ + A++
Sbjct: 579 NRGNALFNLGRFEEAIASYDRALEFKPDYHQAWYNRGNALGNLGRFEEEIASYDRALEIK 638
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALEF+P+ + + RG F A+
Sbjct: 639 PDKHEAWNNRGVALGNLGRLEEAIASYDRALEFKPDDHEAWYNRGNALFNLGRLAEAIAS 698
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ + A+ G AL ++G +++A ++ +A++ + N+ A+ + Y
Sbjct: 699 YDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFNSNYANAYYNKACCYGLQN 758
Query: 566 NSEKALECLQQVLYIDKRF 584
N E A+E LQ+ + +D ++
Sbjct: 759 NVELAIENLQRAINLDVKY 777
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 3/236 (1%)
Query: 406 QILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
Q+ K+ P M P +L G + + A+ F + P + W +G L
Sbjct: 428 QLFKQKPEEMLP-SLAGFTLKLYELKRYQDALKGFNRLVSLLPQWEDGWFYQGTTFYYLE 486
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
+ EAI KALE +P+ + + RG F A+ +++ + A+
Sbjct: 487 QYQEAIASYDKALEIKPDYHEAWNNRGNALDDLGRFEQAIASYDRALEMKPDYHEAWNNR 546
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G AL ++G +A ++ KA++ ++ EAW + +L E+A+ + L
Sbjct: 547 GNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFKPD 606
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +A++ RG L LG+ ++ I L I P E R +G EA+
Sbjct: 607 YHQAWYNRGNALGNLGRFEEEIASYDRALEIKPDKHEAWNNRGVALGNLGRLEEAI 662
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+ A AI+ +D+ L+ P Y EA RG A E AI+ + A++ N
Sbjct: 681 NRGNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFN 740
Query: 446 PSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADI 485
+ A+ + L +VE AI++L +A+ + D+
Sbjct: 741 SNYANAYYNKACC-YGLQNNVELAIENLQRAINLDVKYQDM 780
>gi|159903795|ref|YP_001551139.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT
9211]
gi|159888971|gb|ABX09185.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT
9211]
Length = 442
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 121/263 (46%), Gaps = 3/263 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D RG ++ AI F +I+ D + +A + RG + AI DF +
Sbjct: 124 IDAYFQRGQSKAELNDNQGAIEDFTKIIDIDNNFVDAYLYRGYFLMLLENNKEAIDDFNQ 183
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I+ +P A+ R A+ LG+ A+ D +KA+E P A ++RG + F D
Sbjct: 184 VIRIDPKNEVAYNHRACAKENLGDRKGALDDFNKAIELNPEFAMAYNDRGQMIFSSGDHK 243
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
+A D + LD+E+ AY GL + +Y+ A KA+ +D F E +G
Sbjct: 244 SAFNDFDKAISLDQESGPAYLNRGLCKNIDEDYQGAISDFTKAVTIDPFFTEGYGSRAIS 303
Query: 561 YQDLANSEKALECLQQVLYIDKRFSK---AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++ + E AL L +V+ ID S+ A + RG+ H LG ++ AI D + + D S
Sbjct: 304 KININDYESALYDLNKVMEIDPEESQRGEALYYRGIAKHELGDYQGAILDFNKLIEFDQS 363
Query: 618 NIECLYLRASCYHAIGEYREAVI 640
N + R + YR A++
Sbjct: 364 NSDIYNRRGCAKMCLENYRGAIL 386
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 10/164 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ + + Y AIS F + + DP + E R ++ + E+A+ D + ++
Sbjct: 264 LNRGLCKNIDEDYQGAISDFTKAVTIDPFFTEGYGSRAISKININDYESALYDLNKVMEI 323
Query: 445 NPSA---GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+P GEA RG A+ LG+ AI D +K +EF+ +++DI + RG +++
Sbjct: 324 DPEESQRGEALYYRGIAKHELGDYQGAILDFNKLIEFDQSNSDIYNRRGCAKMCLENYRG 383
Query: 502 AVEDLSACVKLDKENKSAYTYLGLA-------LSSIGEYKKAEE 538
A+ D + ++ + Y GLA S+ ++KKA E
Sbjct: 384 AILDFNKAIENNSTFSLPYLNRGLAKANLNNLTSACSDWKKASE 427
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ G Y AI F+++++ D + RG A+ AI DF +AI++N
Sbjct: 337 RGIAKHELGDYQGAILDFNKLIEFDQSNSDIYNRRGCAKMCLENYRGAILDFNKAIENNS 396
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERG 490
+ + RG A+A L A D KA E E ++ ++L E G
Sbjct: 397 TFSLPYLNRGLAKANLNNLTSACSDWKKASELGEESAVELLKEHG 441
>gi|452211222|ref|YP_007491336.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
gi|452101124|gb|AGF98064.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
Length = 1085
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 10/259 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ +A + G+Y A++ F+ +L+ +P EAL GR A A EAA+ D+ ++ +P
Sbjct: 706 KSLALASLGRYDEAVACFNPLLELEPENVEALEGRAFALARSGRPEAALEDYDVIMKLDP 765
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A + LG EA + LE P + +I++ +G DF AA+
Sbjct: 766 TNSKALAEKASLLEELGRYDEAALTYGEILEITPENREIMYRQGKALEAMGDFEAAIACY 825
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ LD +N A G ALS + +Y++A + KA++ D + AW +++ AN
Sbjct: 826 DKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAW-----YFKGCAN 880
Query: 567 -----SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ ALEC + + + A++ +G L + LG ++I S L IDP +
Sbjct: 881 FAISSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVNESINSYESALEIDPDSPSA 940
Query: 622 LYLRASCYHAIGEYREAVI 640
LY + ++ I EY EA +
Sbjct: 941 LYNKRFSHYRIKEYDEASV 959
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 116/245 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y +I+ +D ++ P+ E+ +G + AI+ + +++ ++ W ++
Sbjct: 67 RYEESIACYDMAIETFPVSSESWYKKGDEYIQTKNYIEAINCYEKSLATDNYLSRVWFQK 126
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A LG EA+ +++F NS+ L +G + +++ A+ + + + E
Sbjct: 127 ATASEKLGLDQEALTSYDTSIQFGANSSKALQMQGKAYAQLENYEEAMNCFNRALNVTPE 186
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ + G+ G+Y+ A E + +AI L+ + +EAW + + + + AL C +
Sbjct: 187 DFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYNKGMDLERMEMYQDALTCYE 246
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
VL + A +GL L LG++++A++ L P N E Y + S +A+G+Y
Sbjct: 247 FVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQY 306
Query: 636 REAVI 640
A+I
Sbjct: 307 DAAII 311
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A GK A+ + + L DP A G + + E AI+ + + ++ N
Sbjct: 638 KGSALDKLGKSEEAMECYQKALDIDPQSSNAWYGMASTSSDLGRAEEAIAYYDQLLKLNS 697
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA + + A A+LG EA+ + LE EP + + L R + AA+ED
Sbjct: 698 TDSEALQGKSLALASLGRYDEAVACFNPLLELEPENVEALEGRAFALARSGRPEAALEDY 757
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+KLD N A L +G Y +A + + +++ E + + + +
Sbjct: 758 DVIMKLDPTNSKALAEKASLLEELGRYDEAALTYGEILEITPENREIMYRQGKALEAMGD 817
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A+ C ++L +D + A + +G L + ++++A+ L DP N Y +
Sbjct: 818 FEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAWYFKG 877
Query: 627 SCYHAI 632
AI
Sbjct: 878 CANFAI 883
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 121/294 (41%), Gaps = 35/294 (11%)
Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
DF L +GI G Y SAI +DQ + +P EA +G + A++ +
Sbjct: 187 DFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYNKGMDLERMEMYQDALTCYE 246
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ S P A +++G LG + EA+Q + L + P++ + + +G V +
Sbjct: 247 FVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQY 306
Query: 500 NAAV-------------------EDLSACVKLDKENKSAYTYL--------------GLA 526
+AA+ + L +K + Y+ + G+A
Sbjct: 307 DAAIICYDRALNPDAGIEIQEAGDSLLESLKAYDSSLPVYSEVPEFKSPAVKIWYDKGMA 366
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
++G Y+ A E + K ++ + + W L S +A+ C + L +D ++K
Sbjct: 367 FDNLGNYESALECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAK 426
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
++ +G LG++K A+K + +D + Y +A IG Y ++++
Sbjct: 427 VWYKKGYDSSKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALARIGRYEDSIV 480
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 119/256 (46%), Gaps = 9/256 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ G+ A+ +D+IL P EA +G+ + +AAI + A+ NP
Sbjct: 262 KGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQYDAAIICYDRAL--NP 319
Query: 447 SAGEAWKRRGQARAALGESVEA----IQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
AG + G + L ES++A + S+ EF+ + I +++G+ ++ +A
Sbjct: 320 DAGIEIQEAGDS---LLESLKAYDSSLPVYSEVPEFKSPAVKIWYDKGMAFDNLGNYESA 376
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E + ++ + ++ + GL L + + +A + KA++LD + + W
Sbjct: 377 LECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSS 436
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
L + A++ + + +D+ ++ A++ + L +G+++ +I L + P + E
Sbjct: 437 KLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALARIGRYEDSIVCYDRVLEVAPDSAEIW 496
Query: 623 YLRASCYHAIGEYREA 638
Y + +G Y+EA
Sbjct: 497 YNKGLLLDELGRYQEA 512
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 113/290 (38%), Gaps = 41/290 (14%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A Y A++ F++ L P E +G + E+AI + +AI NP
Sbjct: 160 QGKAYAQLENYEEAMNCFNRALNVTPEDFELWNQKGIMYDLSGDYESAIECYDQAISLNP 219
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEF----EPNSADILHERGIVNFKFKDFNAA 502
EAW +G E +E QD EF EP + L ++G+ + A
Sbjct: 220 DLVEAWYNKGMDL----ERMEMYQDALTCYEFVLLSEPENLSALQKKGLCLERLGRNEEA 275
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF------------ 550
++ + +N A+ G L+++G+Y A + +A+ D
Sbjct: 276 LQCYDEILVYSPDNTEAWYSKGSVLNAMGQYDAAIICYDRALNPDAGIEIQEAGDSLLES 335
Query: 551 -------LEAWGHLTQF--------------YQDLANSEKALECLQQVLYIDKRFSKAYH 589
L + + +F + +L N E ALEC +VL + + ++
Sbjct: 336 LKAYDSSLPVYSEVPEFKSPAVKIWYDKGMAFDNLGNYESALECYNKVLETEPDHAIIWY 395
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+GL L L + +A+ L +D + Y + +G+Y++AV
Sbjct: 396 QKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSSKLGKYKDAV 445
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 77/156 (49%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + +AI+ +D+IL DP +A+ +G A + + + A++ + +A++ +P AW
Sbjct: 816 GDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAWYF 875
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A A+ + A++ +K ++ +P+ + +G + D N ++ + +++D
Sbjct: 876 KGCANFAISSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVNESINSYESALEIDP 935
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ SA + I EY +A K LD F
Sbjct: 936 DSPSALYNKRFSHYRIKEYDEASVCKAKLDSLDPGF 971
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 121/308 (39%), Gaps = 37/308 (12%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C ++ +++ +G+ K A A+ +D+ LK D Y + +G +
Sbjct: 379 CYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSSKL 438
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ + EAI + + AW + A A +G ++I + LE P+SA+I +
Sbjct: 439 GKYKDAVKSYDEAIDLDENYTLAWYGKAFALARIGRYEDSIVCYDRVLEVAPDSAEIWYN 498
Query: 489 RGIV----------------------NFKFKDF--NAAVEDLSA-CVKLDKENKSA---- 519
+G++ N+ F N +E LS + NK+
Sbjct: 499 KGLLLDELGRYQEASDCYSQALQINSNYSVARFRLNKDIEMLSGNSTSISANNKNTNINP 558
Query: 520 -YTYLGLALSSIGEYKKAEE-------AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
G S + YK A +K + + + EAW Y L E AL
Sbjct: 559 QKAITGGFWSYLLSYKYASPDDNTEISGSIKDLSPEFGYDEAWYGKASTYSKLEMYEDAL 618
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
L I+ ++A++ +G L LG+ ++A++ L IDP + Y AS
Sbjct: 619 HSYDMALAINPVRTEAWYEKGSALDKLGKSEEAMECYQKALDIDPQSSNAWYGMASTSSD 678
Query: 632 IGEYREAV 639
+G EA+
Sbjct: 679 LGRAEEAI 686
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 8/195 (4%)
Query: 397 YASAISIFDQILKEDPMY--PEALIGRGTARAFQR--ELEAAISDFTEAIQSNPSAGEAW 452
Y S++ ++ ++ P + P I AF E+A+ + + +++ P W
Sbjct: 339 YDSSLPVYSEV----PEFKSPAVKIWYDKGMAFDNLGNYESALECYNKVLETEPDHAIIW 394
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++G L +S EA+ KAL+ + A + +++G + K + AV+ + L
Sbjct: 395 YQKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSSKLGKYKDAVKSYDEAIDL 454
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
D+ A+ AL+ IG Y+ + + + +++ + E W + +L ++A +
Sbjct: 455 DENYTLAWYGKAFALARIGRYEDSIVCYDRVLEVAPDSAEIWYNKGLLLDELGRYQEASD 514
Query: 573 CLQQVLYIDKRFSKA 587
C Q L I+ +S A
Sbjct: 515 CYSQALQINSNYSVA 529
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
+A YS+LE+++ + D AL ++P +A+ KG A LG+ EEA+ ++K
Sbjct: 604 KASTYSKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGKSEEAMECYQKA 658
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 46 LCSLRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L ++ ++ AI D +LA I I N+ F S++E ++ + DKAL+ DP
Sbjct: 812 LEAMGDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPA 871
Query: 105 AYILKGCAFSALGRKEEALSVWEK 128
A+ KGCA A+ AL + K
Sbjct: 872 AWYFKGCANFAISSNNAALECFNK 895
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 24/212 (11%)
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
E + PS+ E +G +L E +I+ KALE EPNS+ + +G + +
Sbjct: 9 EVLSQRPSSVEGLLTKGNDLYSLKEYELSIECFEKALEIEPNSSMSWYGKGCSLSALERY 68
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE------------AHLKAIQLD 547
++ AC + E +SS YKK +E + K++ D
Sbjct: 69 EESI----ACYDMAIET--------FPVSSESWYKKGDEYIQTKNYIEAINCYEKSLATD 116
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
W + L ++AL + SKA ++G L +++A+
Sbjct: 117 NYLSRVWFQKATASEKLGLDQEALTSYDTSIQFGANSSKALQMQGKAYAQLENYEEAMNC 176
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ L + P + E + Y G+Y A+
Sbjct: 177 FNRALNVTPEDFELWNQKGIMYDLSGDYESAI 208
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE-IQD 71
L + + I D+L++++S + A+ + LA L SL + +A+ + LL E ++
Sbjct: 679 LGRAEEAIAYYDQLLKLNSTDSEALQGK-SLA-LASLGRYDEAVACFNPLLELEPENVEA 736
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
+ RAF ++ + + D D ++LDPT +A K LGR +EA
Sbjct: 737 LEGRAFALARSGRPEAALEDYDVIMKLDPTNSKALAEKASLLEELGRYDEA 787
>gi|327404353|ref|YP_004345191.1| hypothetical protein Fluta_2367 [Fluviicola taffensis DSM 16823]
gi|327319861|gb|AEA44353.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
taffensis DSM 16823]
Length = 322
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 127/252 (50%), Gaps = 3/252 (1%)
Query: 391 QVNEGKYAS---AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+++ KY S ++ I +K D EA + RG ++ +A++ D + I P
Sbjct: 23 EIDTSKYTSYRLSVRIASNRIKIDSTNAEAYLQRGYYLFLLKDFDASLRDTDKFISLEPK 82
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A++ R + + G +AIQD++KA+ EP++ D++++R + +K ++ A +DL
Sbjct: 83 VASAYQSRAKVSYSQGNIDQAIQDINKAISLEPDNIDMINDRSTLYYKAGNYEACKKDLL 142
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+K D EN S YLG + Y KA I D + EA+ +L Y L ++
Sbjct: 143 YLLKKDPENLSFLLYLGYCETKQKNYSKAITHFQTLISKDSLYKEAYNNLGFCYYSLGDN 202
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
KAL+ + + L ID R+ +AY R + G +KKA++DL+ L + P L RA
Sbjct: 203 IKALKAINKALEIDPRYPEAYDKRSQVWMATGDYKKALEDLNKALSLYPFLSTSLNNRAL 262
Query: 628 CYHAIGEYREAV 639
Y + +Y +A+
Sbjct: 263 IYLEMKQYSDAL 274
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 69/135 (51%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++ F L G + + Y+ AI+ F ++ +D +Y EA G + A+
Sbjct: 151 NLSFLLYLGYCETKQKNYSKAITHFQTLISKDSLYKEAYNNLGFCYYSLGDNIKALKAIN 210
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A++ +P EA+ +R Q A G+ +A++DL+KAL P + L+ R ++ + K +
Sbjct: 211 KALEIDPRYPEAYDKRSQVWMATGDYKKALEDLNKALSLYPFLSTSLNNRALIYLEMKQY 270
Query: 500 NAAVEDLSACVKLDK 514
+ A+ D++ ++ K
Sbjct: 271 SDALGDMNLLLQTAK 285
>gi|323137815|ref|ZP_08072890.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
sp. ATCC 49242]
gi|322396818|gb|EFX99344.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
sp. ATCC 49242]
Length = 290
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 6/217 (2%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+T + + S + +RG+A G++ AI+ F Q +K DP A R A QR
Sbjct: 67 LTEVIRRNPSSAEAYNTRGVAYARVGRFNEAIADFTQAIKLDPNSAAAYTNRALA---QR 123
Query: 430 EL---EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
++ EAA +DF AIQ NP+ A+ R A G +A+ DL A+ P SA
Sbjct: 124 QIGQNEAARNDFDHAIQVNPNHAPAYVGRANLLRAQGNLDQALSDLDTAIRLNPESAQAF 183
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
H RG+++ K D AV D + D + Y G +L ++G+Y KA E A+ +
Sbjct: 184 HARGLIHQKRGDNARAVTDFDNAIDRDPFAAAPYQARGESLVALGKYDKAVEDFNAALNV 243
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
D AW L Y+ N +KA E Q+ L +D +
Sbjct: 244 DNKSALAWAWLGLAYEKNGNRQKAQESYQRALQLDPQ 280
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I L++ + P+SA+ + RG+ + FN A+ D + +KLD + +AYT LA
Sbjct: 64 IDSLTEVIRRNPSSAEAYNTRGVAYARVGRFNEAIADFTQAIKLDPNSAAAYTNRALAQR 123
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
IG+ + A AIQ++ N A+ + N ++AL L + ++ ++A+
Sbjct: 124 QIGQNEAARNDFDHAIQVNPNHAPAYVGRANLLRAQGNLDQALSDLDTAIRLNPESAQAF 183
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
H RGL+ G + +A+ D + + DP R A+G+Y +AV
Sbjct: 184 HARGLIHQKRGDNARAVTDFDNAIDRDPFAAAPYQARGESLVALGKYDKAV 234
>gi|445063179|ref|ZP_21375426.1| hypothetical protein H263_07156 [Brachyspira hampsonii 30599]
gi|444505434|gb|ELV05949.1| hypothetical protein H263_07156 [Brachyspira hampsonii 30599]
Length = 290
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 123/249 (49%), Gaps = 6/249 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ +RG+A+ + G Y AI F+ +++ DP Y A G + E AI+ +
Sbjct: 37 SVEIYNNRGLAKSSLGMYEEAIEDFENVIRIDPKYINAYNNIGLVKHNLGLYEEAINYYK 96
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+ + + +A G A LG EAI+ KA+E PN A + G++ +
Sbjct: 97 KALLLDNNCVQACNNIGLANHNLGLYDEAIKYYIKAIEISPN-AHTYNNIGLIKNDLGMY 155
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E + ++LD AY +GL+ ++ Y +A E K IQLD + A+ ++
Sbjct: 156 EEAIEYFNKVIQLDNHYIKAYYNMGLSKYNLKNYDEALEYFNKVIQLDSKNIYAYNNIGI 215
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
QDL +ALE + L +DK +SKAY+ RG+ L ++ A+ D + L ++P+
Sbjct: 216 IKQDLKLHSEALEYFNKALLLDKNYSKAYYNRGVSELKLELYECALYDFNICLELEPN-- 273
Query: 620 ECLYLRASC 628
Y A C
Sbjct: 274 ---YFPAYC 279
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+ ++E + + ++ Y GLA SS+G Y++A E I++D ++ A+ ++
Sbjct: 19 DYKKSLEYFNKLIFYYGDSVEIYNNRGLAKSSLGMYEEAIEDFENVIRIDPKYINAYNNI 78
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+L E+A+ ++ L +D +A + GL H LG + +AIK + I P+
Sbjct: 79 GLVKHNLGLYEEAINYYKKALLLDNNCVQACNNIGLANHNLGLYDEAIKYYIKAIEISPN 138
>gi|145530013|ref|XP_001450788.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418413|emb|CAK83391.1| unnamed protein product [Paramecium tetraurelia]
Length = 652
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 114/231 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A + KY AI +++ + +P Y A +G A + + + AI +AI N
Sbjct: 22 NKGSALCDLNKYQEAIECYEKAIAINPKYDSAWHNKGWALCYLNKFQEAIECNNKAIAIN 81
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW+ +G A L + EAI+ KA+ P H +G + A+E
Sbjct: 82 PKYDSAWQNKGSALHKLNKYQEAIKCYDKAIAINPKYDSAWHSKGQALEDQNKYQEAIEC 141
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++ + A+ G AL ++ +Y+KA + + KAI ++ + AW + +L
Sbjct: 142 YDKAIAINSKYDCAWHSKGQALYNLNQYQKAIQCYEKAIVINPKYDSAWHNKGSALCNLN 201
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
N ++A++C + + I+ ++ A+H +G L+ L ++++AIK + ++P
Sbjct: 202 NYQEAIKCYDKAIAINPKYDSAWHNKGWALYKLNKYQEAIKCYDKAIYMNP 252
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 114/240 (47%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI +D+ + +P A +G+A + + AI + +AI NP AW +G A
Sbjct: 2 AIECYDKSIAINPNEDSAWHNKGSALCDLNKYQEAIECYEKAIAINPKYDSAWHNKGWAL 61
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L + EAI+ +KA+ P +G K + A++ + ++ + SA
Sbjct: 62 CYLNKFQEAIECNNKAIAINPKYDSAWQNKGSALHKLNKYQEAIKCYDKAIAINPKYDSA 121
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G AL +Y++A E + KAI ++ + AW Q +L +KA++C ++ +
Sbjct: 122 WHSKGQALEDQNKYQEAIECYDKAIAINSKYDCAWHSKGQALYNLNQYQKAIQCYEKAIV 181
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I+ ++ A+H +G L L +++AIK + I+P + + + + +Y+EA+
Sbjct: 182 INPKYDSAWHNKGSALCNLNNYQEAIKCYDKAIAINPKYDSAWHNKGWALYKLNKYQEAI 241
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 7/261 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G A ++ KY AI +D+ + + Y A +G A + + AI + +AI N
Sbjct: 124 SKGQALEDQNKYQEAIECYDKAIAINSKYDCAWHSKGQALYNLNQYQKAIQCYEKAIVIN 183
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G A L EAI+ KA+ P H +G +K + A++
Sbjct: 184 PKYDSAWHNKGSALCNLNNYQEAIKCYDKAIAINPKYDSAWHNKGWALYKLNKYQEAIKC 243
Query: 506 LSACVKLDKENKSAYT-------YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ ++ + SA+ YLG AL ++ +Y++A E + KAI ++ + + +
Sbjct: 244 YDKAIYMNPKYDSAWHKMGIRNHYLGWALENLNKYQEANECYDKAIAINPKYDSSQFNKG 303
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
Q +DL + A++ + I+ ++ + G + L + + I+ + I+P
Sbjct: 304 QALEDLIKDQGAIQSYDKATAINPKYDSSSQSNGFCIQDLNKQLEEIECYIKAIAINPKY 363
Query: 619 IECLYLRASCYHAIGEYREAV 639
+ + S H + +Y+EA+
Sbjct: 364 DSTWHNKGSELHKLNKYQEAI 384
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 136/301 (45%), Gaps = 10/301 (3%)
Query: 317 SLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKS 376
+LN +E Y K+ I+ N DS++ + + D++K+ +K + S
Sbjct: 274 NLNKYQEANECYDKA-IAINPKYDSSQFNKGQALE-DLIKDQGAIQSYDKATAINPKYDS 331
Query: 377 KSISVDFRLSRGIAQVNEGK-YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
S S F + Q+ E + Y AI+I +P Y +G+ + + AI
Sbjct: 332 SSQSNGFCIQDLNKQLEEIECYIKAIAI-------NPKYDSTWHNKGSELHKLNKYQEAI 384
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+ +AI NP+ W G A L + EAIQ KA+ + + +G+ +
Sbjct: 385 ECYNKAISFNPNQDSTWYHTGSALCNLNKYQEAIQCYDKAISINHKLNEAQNNKGLALYN 444
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ A+E + + ++ + A+ G AL ++ +Y++A E + KAI ++ + AW
Sbjct: 445 LNKYQEAIECFNKAIAINPKYDIAWYNKGSALCNLTKYQQAIECYDKAIAINPKYASAWN 504
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ D ++A+EC + + ++ ++ A+H +G LH L + +AI+ + I+
Sbjct: 505 NKGLALDDQNKYQEAIECYDKAMAVNPKYDGAWHNKGFALHKLNKFSEAIECYVKAIAIN 564
Query: 616 P 616
P
Sbjct: 565 P 565
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 100/214 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A K+ AI ++ + +P Y A +G+A + + AI + +AI N
Sbjct: 56 NKGWALCYLNKFQEAIECNNKAIAINPKYDSAWQNKGSALHKLNKYQEAIKCYDKAIAIN 115
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +GQA + EAI+ KA+ H +G + + A++
Sbjct: 116 PKYDSAWHSKGQALEDQNKYQEAIECYDKAIAINSKYDCAWHSKGQALYNLNQYQKAIQC 175
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++ + SA+ G AL ++ Y++A + + KAI ++ + AW + L
Sbjct: 176 YEKAIVINPKYDSAWHNKGSALCNLNNYQEAIKCYDKAIAINPKYDSAWHNKGWALYKLN 235
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
++A++C + +Y++ ++ A+H G+ H LG
Sbjct: 236 KYQEAIKCYDKAIYMNPKYDSAWHKMGIRNHYLG 269
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A N KY A +D+ + +P Y + +G A + + AI + +A NP
Sbjct: 269 GWALENLNKYQEANECYDKAIAINPKYDSSQFNKGQALEDLIKDQGAIQSYDKATAINPK 328
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + G L + +E I+ KA+ P H +G K + A+E +
Sbjct: 329 YDSSSQSNGFCIQDLNKQLEEIECYIKAIAINPKYDSTWHNKGSELHKLNKYQEAIECYN 388
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ + S + + G AL ++ +Y++A + + KAI ++ EA + +L
Sbjct: 389 KAISFNPNQDSTWYHTGSALCNLNKYQEAIQCYDKAISINHKLNEAQNNKGLALYNLNKY 448
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++A+EC + + I+ ++ A++ +G L L ++++AI+ + I+P
Sbjct: 449 QEAIECFNKAIAINPKYDIAWYNKGSALCNLTKYQQAIECYDKAIAINP 497
>gi|384210358|ref|YP_005596078.1| hypothetical protein Bint_2904 [Brachyspira intermedia PWS/A]
gi|343388008|gb|AEM23498.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 596
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 102/189 (53%)
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ RG A+ L + EAI+D KA+E PNS+ + RG + + + A++D +
Sbjct: 330 AYNNRGNAKYNLEQYKEAIKDFDKAIELNPNSSKTYYNRGNTKYSLEQYKEAIKDFDKSI 389
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+LD N+ Y G+ + + YK+A E K+I+LD N EA+ + DL +EKA
Sbjct: 390 ELDPNNQDTYNNRGIVKADLNYYKEAIEDFNKSIELDPNCSEAYNNRGTTKLDLGFNEKA 449
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
++ + + ++ S AY+ RG + LG +KKA KD + + ++P+N R + +
Sbjct: 450 IKDFNKAIELNPNNSSAYNNRGNAKNKLGLYKKATKDFNKAIKLNPNNGNAYNNRGNAKN 509
Query: 631 AIGEYREAV 639
+ +Y+EA+
Sbjct: 510 YLKKYKEAI 518
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 118/238 (49%), Gaps = 18/238 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ N +Y AI FD+ ++ +P + RG + + + AI DF ++I+ +
Sbjct: 333 NRGNAKYNLEQYKEAIKDFDKAIELNPNSSKTYYNRGNTKYSLEQYKEAIKDFDKSIELD 392
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + + RG +A L EAI+D +K++E +PN ++ + RG A++D
Sbjct: 393 PNNQDTYNNRGIVKADLNYYKEAIEDFNKSIELDPNCSEAYNNRGTTKLDLGFNEKAIKD 452
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL-------EAWGHLT 558
+ ++L+ N SAY G A + +G YKKA + KAI+L+ N A +L
Sbjct: 453 FNKAIELNPNNSSAYNNRGNAKNKLGLYKKATKDFNKAIKLNPNNGNAYNNRGNAKNYLK 512
Query: 559 QFYQDLANSEKALEC--LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
++ + + + KA+E Q + Y +K SK+Y LG + +A D G +
Sbjct: 513 KYKEAIKDFNKAIELNYNQFIAYYNKGISKSY---------LGLNDEAYNDFIKGYNL 561
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G Y A F++ +K +P A RG A+ + ++ + AI DF +AI+ N
Sbjct: 469 NRGNAKNKLGLYKKATKDFNKAIKLNPNNGNAYNNRGNAKNYLKKYKEAIKDFNKAIELN 528
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
+ A+ +G +++ LG + EA D K +++ +E+ I+
Sbjct: 529 YNQFIAYYNKGISKSYLGLNDEAYNDFIKGYNLADDTSKKEYEQRII 575
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSY 67
+++Y L + + I + D+ + ++ + R SL + +AI+ D +
Sbjct: 336 NAKYNLEQYKEAIKDFDKAIELNPNSSKTYYNRGNTK--YSLEQYKEAIKDFDKSIELDP 393
Query: 68 EIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
QD N R + L +K I D +K+++LDP +AY +G LG E+A+ +
Sbjct: 394 NNQDTYNNRGIVKADLNYYKEAIEDFNKSIELDPNCSEAYNNRGTTKLDLGFNEKAIKDF 453
Query: 127 EKGYE 131
K E
Sbjct: 454 NKAIE 458
>gi|186684446|ref|YP_001867642.1| hypothetical protein Npun_R4324 [Nostoc punctiforme PCC 73102]
gi|186466898|gb|ACC82699.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 763
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 5/289 (1%)
Query: 346 SKLSFKWDMLK-ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
S LSF W+++ + +A R C+ + S D ++G A N G+ AI+ +
Sbjct: 435 SLLSFSWNLINSKRYQDALR----CLNKALTFTPDSSDILFAKGNALFNLGRLEEAIASY 490
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
DQ L P +A RG A LE AI+ + +A+ P +AW RG A LG
Sbjct: 491 DQALNFKPDDHQAWYNRGIALFNLGRLEEAIASYDQALNFKPDDHQAWYNRGIALFNLGR 550
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
EAI +AL F+P+ + + RGI + A+ + ++ A+ G
Sbjct: 551 LEEAIASYDQALNFKPDKDNAWNNRGIALVELGRLEEAIASYDQALNFKPDDHQAWYNRG 610
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
+AL ++G ++A + +A+ ++ EAW + +L E+A+ Q + I
Sbjct: 611 IALFNLGRLEEAIASFDQALNFKPDYHEAWYNRGTALVELGRLEEAIASFDQAIKIKSDD 670
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+A++ G L L + ++AI L I P Y +A CY +G
Sbjct: 671 HQAWNNWGYALVKLERLEEAIASFDEALKIKPDKDNAWYNKACCYGLLG 719
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 134/319 (42%), Gaps = 21/319 (6%)
Query: 308 HDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKK 367
H ++ + S + + NS+ Y + NK+ T S + F AK N
Sbjct: 429 HQEIKASLLSFSWNLINSKRYQDALRCLNKALTFTPDSSDILF-----------AKGNAL 477
Query: 368 FCVTRISK---SKSISVDFR-------LSRGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
F + R+ + S +++F+ +RGIA N G+ AI+ +DQ L P +A
Sbjct: 478 FNLGRLEEAIASYDQALNFKPDDHQAWYNRGIALFNLGRLEEAIASYDQALNFKPDDHQA 537
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
RG A LE AI+ + +A+ P AW RG A LG EAI +AL
Sbjct: 538 WYNRGIALFNLGRLEEAIASYDQALNFKPDKDNAWNNRGIALVELGRLEEAIASYDQALN 597
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F+P+ + RGI F A+ + + A+ G AL +G ++A
Sbjct: 598 FKPDDHQAWYNRGIALFNLGRLEEAIASFDQALNFKPDYHEAWYNRGTALVELGRLEEAI 657
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ +AI++ + +AW + L E+A+ + L I A++ +
Sbjct: 658 ASFDQAIKIKSDDHQAWNNWGYALVKLERLEEAIASFDEALKIKPDKDNAWYNKACCYGL 717
Query: 598 LGQHKKAIKDLSSGLGIDP 616
LG AI++L + ++P
Sbjct: 718 LGNVDLAIENLQQSINLNP 736
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AI+ +DQ L P A RG A LE AI+ + +A+
Sbjct: 540 NRGIALFNLGRLEEAIASYDQALNFKPDKDNAWNNRGIALVELGRLEEAIASYDQALNFK 599
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG EAI +AL F+P+ + + RG + A+
Sbjct: 600 PDDHQAWYNRGIALFNLGRLEEAIASFDQALNFKPDYHEAWYNRGTALVELGRLEEAIAS 659
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ ++ A+ G AL + ++A + +A+++ + AW + Y L
Sbjct: 660 FDQAIKIKSDDHQAWNNWGYALVKLERLEEAIASFDEALKIKPDKDNAWYNKACCYGLLG 719
Query: 566 NSEKALECLQQVLYIDKRF 584
N + A+E LQQ + ++ ++
Sbjct: 720 NVDLAIENLQQSINLNPKY 738
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA V G+ AI+ +DQ L P +A RG A LE AI+ F +A+
Sbjct: 574 NRGIALVELGRLEEAIASYDQALNFKPDDHQAWYNRGIALFNLGRLEEAIASFDQALNFK 633
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +A++ + + + G K + A+
Sbjct: 634 PDYHEAWYNRGTALVELGRLEEAIASFDQAIKIKSDDHQAWNNWGYALVKLERLEEAIAS 693
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+K+ + +A+ +G A E ++I L+ + E
Sbjct: 694 FDEALKIKPDKDNAWYNKACCYGLLGNVDLAIENLQQSINLNPKYRE 740
>gi|159028862|emb|CAO90667.1| mom72 [Microcystis aeruginosa PCC 7806]
Length = 268
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 38 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 97
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 98 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 157
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 158 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 213
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSS 610
++AYH RGL + LG +KAI DL +
Sbjct: 214 AEAYHNRGLTYYKLGNREKAIADLEA 239
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+
Sbjct: 76 ADAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTK 135
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 136 AIALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 195
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 196 QEMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 233
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 28 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 87
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 88 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 147
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGE 634
RG LG+H +AI+D + L + + + Y RA Y+ G+
Sbjct: 148 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 195
>gi|119484720|ref|ZP_01619202.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119457538|gb|EAW38662.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 335
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L +G +A Q A+ D + + NP+ A+ R L + AI+DL AL+
Sbjct: 6 LYQQGLIKARQGNYRGALDDLNQVLSCNPNHAIAYTNRALLYYHLKDYKNAIKDLDYALQ 65
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P +D RG + A++DL +K + + + Y LGLA++ GEY+ A
Sbjct: 66 INPKLSDAYLNRGNAWRHLGKYEKAIKDLKIALKFNPTSDAIYNNLGLAIAQSGEYEDAL 125
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ + KA+ + + + + + + + A++ + + + ++KAY RGL H
Sbjct: 126 KYYNKALLFNPKNHKTYHNRGRSFYMGGRKQDAIQDFNKTIELSPNYTKAYINRGLCHHQ 185
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG+H+ AI+D ++ L ID N+ Y R Y+++ E R A+
Sbjct: 186 LGEHQAAIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAI 227
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI D L+ +P +A + RG A + E AI D A++ NP++ + G
Sbjct: 53 YKNAIKDLDYALQINPKLSDAYLNRGNAWRHLGKYEKAIKDLKIALKFNPTSDAIYNNLG 112
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A A GE +A++ +KAL F P + H RG + A++D + ++L
Sbjct: 113 LAIAQSGEYEDALKYYNKALLFNPKNHKTYHNRGRSFYMGGRKQDAIQDFNKTIELSPNY 172
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY GL +GE++ A E + A+++D + A+ + Y L A++ Q
Sbjct: 173 TKAYINRGLCHHQLGEHQAAIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFNQ 232
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ +D + KAY RGL + G +A KD
Sbjct: 233 AIQLDPTYIKAYLNRGLARYKSGNQTEANKDF 264
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A + GKY AI LK +P G A A E E A+ + +A
Sbjct: 72 DAYLNRGNAWRHLGKYEKAIKDLKIALKFNPTSDAIYNNLGLAIAQSGEYEDALKYYNKA 131
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ NP + + RG++ G +AIQD +K +E PN RG+ + + + A
Sbjct: 132 LLFNPKNHKTYHNRGRSFYMGGRKQDAIQDFNKTIELSPNYTKAYINRGLCHHQLGEHQA 191
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+ED + +K+D N AY G S+ E + A + +AIQLD +++A+
Sbjct: 192 AIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQLDPTYIKAY 244
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A G+Y A+ +++ L +P + RG + + AI DF + I+ +P+
Sbjct: 112 GLAIAQSGEYEDALKYYNKALLFNPKNHKTYHNRGRSFYMGGRKQDAIQDFNKTIELSPN 171
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ RG LGE AI+D + AL+ + + + RG V + K+ +A++D +
Sbjct: 172 YTKAYINRGLCHHQLGEHQAAIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFN 231
Query: 508 ACVKLDKENKSAYTYLGLA 526
++LD AY GLA
Sbjct: 232 QAIQLDPTYIKAYLNRGLA 250
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G+ AI F++ ++ P Y +A I RG E +AAI D+ A++ +
Sbjct: 144 NRGRSFYMGGRKQDAIQDFNKTIELSPNYTKAYINRGLCHHQLGEHQAAIEDYNTALKID 203
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG +L E AI D ++A++ +P RG+ +K + A +D
Sbjct: 204 AYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQLDPTYIKAYLNRGLARYKSGNQTEANKD 263
Query: 506 LS--ACVKLDKENKSAYTY 522
CV N AY Y
Sbjct: 264 FYHVMCV-----NADAYVY 277
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 366 KKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
K+ + +K+ +S ++ ++RG+ G++ +AI ++ LK D A RG
Sbjct: 155 KQDAIQDFNKTIELSPNYTKAYINRGLCHHQLGEHQAAIEDYNTALKIDAYNVYAYYNRG 214
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
+E+ +AI DF +AIQ +P+ +A+ RG AR G EA +D +
Sbjct: 215 CVYYSLKEMRSAIDDFNQAIQLDPTYIKAYLNRGLARYKSGNQTEANKDFYHVM 268
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
NRA Y L+ +K+ I+D D ALQ++P L AY+ +G A+ LG+ E+A+
Sbjct: 42 NRALLYYHLKDYKNAIKDLDYALQINPKLSDAYLNRGNAWRHLGKYEKAI 91
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 24/159 (15%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ +++ A++I +Y + NR Y L+ + I D ++A+QLDPT ++AY
Sbjct: 191 AAIEDYNTALKI------DAYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQLDPTYIKAY 244
Query: 107 ILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVS 166
+ +G A G + EA K + H + +AD + + + R + S
Sbjct: 245 LNRGLARYKSGNQTEA----NKDFYHVMCVNADAYVYYQAQ---------RGTPSDVSYS 291
Query: 167 NSMSSLTVSESGLNANDKM-----SETSENHNKSDICDS 200
+ + V++ G + E N+ +S IC++
Sbjct: 292 RNAPQVEVNQGGEYFHTTFLEGLWDEVDLNYRESTICEA 330
>gi|427416698|ref|ZP_18906881.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
gi|425759411|gb|EKV00264.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
Length = 272
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 101/191 (52%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ RG +A Q +L AAI+ +T+ I+++ EA+ +RG A +G+ +AI D S AL
Sbjct: 48 LLERGQQQAKQGQLAAAIATYTQLIEADTDNAEAYLQRGIAYHDVGDINQAIDDFSAALR 107
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+ + + RG + NAA+ DL+ + LD E AY G L+ +G++ A
Sbjct: 108 LRSDHPETFYHRGEAYLHTSNVNAAIADLTQAIDLDPEFTRAYMDRGTVLAELGQFSLAL 167
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+A+ L+ + +A+ + Q Y L + + AL + +D ++AY RGLL H
Sbjct: 168 TDFQQAVALEPDNADAYYNRAQVYIGLRDGQTALADFDTAIRLDPELAEAYGTRGLLNHR 227
Query: 598 LGQHKKAIKDL 608
LG ++A+ DL
Sbjct: 228 LGNSQQAMADL 238
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Query: 353 DMLKETSNEAKRNKKFCV----TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQIL 408
++L+ +AK+ + T++ ++ + + + L RGIA + G AI F L
Sbjct: 47 ELLERGQQQAKQGQLAAAIATYTQLIEADTDNAEAYLQRGIAYHDVGDINQAIDDFSAAL 106
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ +PE RG A + AAI+D T+AI +P A+ RG A LG+ A
Sbjct: 107 RLRSDHPETFYHRGEAYLHTSNVNAAIADLTQAIDLDPEFTRAYMDRGTVLAELGQFSLA 166
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ D +A+ EP++AD + R V +D A+ D ++LD E AY GL
Sbjct: 167 LTDFQQAVALEPDNADAYYNRAQVYIGLRDGQTALADFDTAIRLDPELAEAYGTRGLLNH 226
Query: 529 SIGEYKKA 536
+G ++A
Sbjct: 227 RLGNSQQA 234
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
+ V A+Q + A+ +AD L ERG K AA+ + ++ D +N AY
Sbjct: 27 QPVRAVQP-AHAVPLMATNADELLERGQQQAKQGQLAAAIATYTQLIEADTDNAEAYLQR 85
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G+A +G+ +A + A++L + E + H + Y +N A+ L Q + +D
Sbjct: 86 GIAYHDVGDINQAIDDFSAALRLRSDHPETFYHRGEAYLHTSNVNAAIADLTQAIDLDPE 145
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
F++AY RG +L LGQ A+ D + ++P N + Y RA Y
Sbjct: 146 FTRAYMDRGTVLAELGQFSLALTDFQQAVALEPDNADAYYNRAQVY 191
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A ++ +AI+ Q + DP + A + RGT A + A++DF +A+ P
Sbjct: 119 RGEAYLHTSNVNAAIADLTQAIDLDPEFTRAYMDRGTVLAELGQFSLALTDFQQAVALEP 178
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ R Q L + A+ D A+ +P A+ RG++N + + A+ DL
Sbjct: 179 DNADAYYNRAQVYIGLRDGQTALADFDTAIRLDPELAEAYGTRGLLNHRLGNSQQAMADL 238
Query: 507 SACVKL 512
L
Sbjct: 239 QQAATL 244
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 365 NKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + ++++ + +F + RG G+++ A++ F Q + +P +A R
Sbjct: 128 NVNAAIADLTQAIDLDPEFTRAYMDRGTVLAELGQFSLALTDFQQAVALEPDNADAYYNR 187
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
R+ + A++DF AI+ +P EA+ RG LG S +A+ DL +A N
Sbjct: 188 AQVYIGLRDGQTALADFDTAIRLDPELAEAYGTRGLLNHRLGNSQQAMADLQQAATLFQN 247
Query: 482 SAD 484
D
Sbjct: 248 RGD 250
>gi|298492639|ref|YP_003722816.1| hypothetical protein Aazo_4355 ['Nostoc azollae' 0708]
gi|298234557|gb|ADI65693.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 1192
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 114/253 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ Q G A++ ++Q K +P E + + E AI+ + +AI P
Sbjct: 309 QGLQQAKSGDLLGALAFYNQATKLEPESAEYWFNQALTLFHLKRFEEAIAAYDQAIALKP 368
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG G+ AI KA+E +PN + RG+ K A+
Sbjct: 369 DFFKAWYNRGGIMVEFGDFDGAITSFDKAIELQPNYQEAWSSRGLALLKLGLIWEAISSY 428
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L ++++ + Y G+AL+ +Y+ A ++ +AI++ ++ E W +L
Sbjct: 429 DQALELQRQDQETWYYRGVALAVGEQYEDAIASYNQAIEIQPDYHEVWIDRGVVLFNLKR 488
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+E Q L I F A++ RG+ L L + ++AI + I P Y +A
Sbjct: 489 WSEAIESWDQALSIQPDFYLAWYNRGIALENLARREEAITSYQKAITIKPDFHPAWYNQA 548
Query: 627 SCYHAIGEYREAV 639
++ + + EA+
Sbjct: 549 VAFYYLNRFAEAI 561
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG V G + AI+ FD+ ++ P Y EA RG A + AIS + +A++
Sbjct: 376 NRGGIMVEFGDFDGAITSFDKAIELQPNYQEAWSSRGLALLKLGLIWEAISSYDQALELQ 435
Query: 446 PSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
E W RG A A+GE E AI ++A+E +P+ ++ +RG+V F K ++ A+E
Sbjct: 436 RQDQETWYYRGVA-LAVGEQYEDAIASYNQAIEIQPDYHEVWIDRGVVLFNLKRWSEAIE 494
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + + A+ G+AL ++ ++A ++ KAI + +F AW + + L
Sbjct: 495 SWDQALSIQPDFYLAWYNRGIALENLARREEAITSYQKAITIKPDFHPAWYNQAVAFYYL 554
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRG 592
+A+ C L I + +A+ RG
Sbjct: 555 NRFAEAISCYDSALEIKLDYWEAWLGRG 582
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 10/229 (4%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+A +G +A +L A++ + +A + P + E W + L EAI +A
Sbjct: 304 QAWFYQGLQQAKSGDLLGALAFYNQATKLEPESAEYWFNQALTLFHLKRFEEAIAAYDQA 363
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ +P+ + RG + +F DF+ A+ ++L + A++ GLAL +G +
Sbjct: 364 IALKPDFFKAWYNRGGIMVEFGDFDGAITSFDKAIELQPNYQEAWSSRGLALLKLGLIWE 423
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLA-----NSEKALECLQQVLYIDKRFSKAYHL 590
A ++ +A++L R E W +Y+ +A E A+ Q + I + + +
Sbjct: 424 AISSYDQALELQRQDQETW-----YYRGVALAVGEQYEDAIASYNQAIEIQPDYHEVWID 478
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG++L L + +AI+ L I P Y R + EA+
Sbjct: 479 RGVVLFNLKRWSEAIESWDQALSIQPDFYLAWYNRGIALENLARREEAI 527
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 9/180 (5%)
Query: 468 AIQDLSKALEFEP-------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
AI+D +AL P N A +G+ K D A+ + KL+ E+ +
Sbjct: 281 AIRDERQALIQRPSFQITVTNQAQAWFYQGLQQAKSGDLLGALAFYNQATKLEPESAEYW 340
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
L L + +++A A+ +AI L +F +AW + + + + A+ + + +
Sbjct: 341 FNQALTLFHLKRFEEAIAAYDQAIALKPDFFKAWYNRGGIMVEFGDFDGAITSFDKAIEL 400
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE-YREAV 639
+ +A+ RGL L LG +AI L + + E Y R A+GE Y +A+
Sbjct: 401 QPNYQEAWSSRGLALLKLGLIWEAISSYDQALELQRQDQETWYYRGVAL-AVGEQYEDAI 459
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 5/117 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG+ N +++ AI +DQ L P + A RG A E AI+ + +AI
Sbjct: 477 IDRGVVLFNLKRWSEAIESWDQALSIQPDFYLAWYNRGIALENLARREEAITSYQKAITI 536
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-----IVNFKF 496
P AW + A L EAI ALE + + + RG +VN KF
Sbjct: 537 KPDFHPAWYNQAVAFYYLNRFAEAISCYDSALEIKLDYWEAWLGRGGAVGNLVNDKF 593
>gi|113475613|ref|YP_721674.1| hypothetical protein Tery_1947 [Trichodesmium erythraeum IMS101]
gi|110166661|gb|ABG51201.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 564
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 129/259 (49%), Gaps = 9/259 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G+ N +Y AI+ FD+ +K +P ++ + + ++ AI + EA++
Sbjct: 111 SYGVVLSNLKQYEQAIACFDKAIKINPNDYQSWFNKAIILSELKQDLPAIYCYKEALKIQ 170
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P GE W +GQA + + EA+ A + +P++ DI +RG+ F+ + + AV
Sbjct: 171 PMKGEIWYGQGQALLNVQKYAEALAAYDCAAKLQPDNYDIWFKRGLALFQTQRYAEAVIS 230
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L EN + LG+A S + +Y A + KAI+L+ + EAW +Y+ LA
Sbjct: 231 YGHAIELQPENYLGWFNLGIAQSKLHKYHDAVSSFNKAIKLNPDDYEAW-----YYKGLA 285
Query: 566 ----NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
E + CL + + + + + RG +L L ++++A++ + + I+ + E
Sbjct: 286 LKNHWKEGGVACLDKAINFNPNLPEIWISRGYILLDLFKYREALESFNKAITINSNYPES 345
Query: 622 LYLRASCYHAIGEYREAVI 640
R + A+G+Y EA+I
Sbjct: 346 WLGRGKAWMALGKYNEALI 364
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 9/265 (3%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG+A +YA A+ + ++ P G A++ + A+S F +A
Sbjct: 209 DIWFKRGLALFQTQRYAEAVISYGHAIELQPENYLGWFNLGIAQSKLHKYHDAVSSFNKA 268
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP EAW +G A + + L KA+ F PN +I RG + +
Sbjct: 269 IKLNPDDYEAWYYKGLALKNHWKE-GGVACLDKAINFNPNLPEIWISRGYILLDLFKYRE 327
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E + + ++ ++ G A ++G+Y +A A+ A+ ++ FLEAW +
Sbjct: 328 ALESFNKAITINSNYPESWLGRGKAWMALGKYNEALIAYGNAVSIEPYFLEAWNCRGEAL 387
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHL------RGLLLHGLGQHKKAIKDLSSGLGID 615
+ + N ++AL +V I F + + RG L L ++ +AI+ + +
Sbjct: 388 ERVQNYDQALAAYDKV--IKMSFEQGVSVAKVGLQRGAALEKLERYPEAIEAYNLVIEKQ 445
Query: 616 PSNIECLYLRASCYHAIGEYREAVI 640
P+N + R + Y EAV+
Sbjct: 446 PNNFDGWLNRGLNLEKMANYEEAVL 470
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 5/257 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A N K ++ D+ + +P PE I RG + A+ F +AI N
Sbjct: 282 KGLALKNHWK-EGGVACLDKAINFNPNLPEIWISRGYILLDLFKYREALESFNKAITINS 340
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ E+W RG+A ALG+ EA+ A+ EP + + RG + ++++ A+
Sbjct: 341 NYPESWLGRGKAWMALGKYNEALIAYGNAVSIEPYFLEAWNCRGEALERVQNYDQALAAY 400
Query: 507 SACVKLDKENKSAYTYLGL----ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+K+ E + +GL AL + Y +A EA+ I+ N + W + +
Sbjct: 401 DKVIKMSFEQGVSVAKVGLQRGAALEKLERYPEAIEAYNLVIEKQPNNFDGWLNRGLNLE 460
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+AN E+A+ + + I +A+ L+L L + +AI + + + P N E
Sbjct: 461 KMANYEEAVLSYSRAISIWPSNYQAWLQLALMLEKLERLDEAIVAYNKIISLRPGNHETW 520
Query: 623 YLRASCYHAIGEYREAV 639
R +G +EAV
Sbjct: 521 LKRGLILERLGYVQEAV 537
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 112/245 (45%), Gaps = 4/245 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+ +SRG ++ KY A+ F++ + + YPE+ +GRG A + A+ + A
Sbjct: 310 EIWISRGYILLDLFKYREALESFNKAITINSNYPESWLGRGKAWMALGKYNEALIAYGNA 369
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE--FEP--NSADILHERGIVNFKFK 497
+ P EAW RG+A + +A+ K ++ FE + A + +RG K +
Sbjct: 370 VSIEPYFLEAWNCRGEALERVQNYDQALAAYDKVIKMSFEQGVSVAKVGLQRGAALEKLE 429
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+E + ++ N + GL L + Y++A ++ +AI + + +AW L
Sbjct: 430 RYPEAIEAYNLVIEKQPNNFDGWLNRGLNLEKMANYEEAVLSYSRAISIWPSNYQAWLQL 489
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ L ++A+ +++ + + + RGL+L LG ++A+ L I P
Sbjct: 490 ALMLEKLERLDEAIVAYNKIISLRPGNHETWLKRGLILERLGYVQEAVSSYKIVLEIKPD 549
Query: 618 NIECL 622
E +
Sbjct: 550 YHEAI 554
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++RG ++ + +A+ VK+ + + L ALS + +Y++A EA+ +++ L
Sbjct: 42 YDRGNRLYEMGRYESAIPYYENAVKIKPDWAIGWLKLAEALSKLQKYEQAVEAYKRSLSL 101
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+N +AW +L E+A+ C + + I+ +++ + ++L L Q AI
Sbjct: 102 KQNAHQAWHSYGVVLSNLKQYEQAIACFDKAIKINPNDYQSWFNKAIILSELKQDLPAIY 161
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P E Y + + +Y EA+
Sbjct: 162 CYKEALKIQPMKGEIWYGQGQALLNVQKYAEAL 194
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 79/186 (42%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG +G AI A++ +P+ A + K + + AVE + L +
Sbjct: 44 RGNRLYEMGRYESAIPYYENAVKIKPDWAIGWLKLAEALSKLQKYEQAVEAYKRSLSLKQ 103
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
A+ G+ LS++ +Y++A KAI+++ N ++W + +L A+ C
Sbjct: 104 NAHQAWHSYGVVLSNLKQYEQAIACFDKAIKINPNDYQSWFNKAIILSELKQDLPAIYCY 163
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ L I + ++ +G L + ++ +A+ + P N + + R
Sbjct: 164 KEALKIQPMKGEIWYGQGQALLNVQKYAEALAAYDCAAKLQPDNYDIWFKRGLALFQTQR 223
Query: 635 YREAVI 640
Y EAVI
Sbjct: 224 YAEAVI 229
>gi|443646836|ref|ZP_21129514.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|443335665|gb|ELS50129.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 260
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSS 610
++AYH RGL + LG +KAI DL +
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADLEA 231
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+A
Sbjct: 69 DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
I N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQ 188
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGE 634
RG LG+H +AI+D + L + + + Y RA Y+ G+
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
>gi|440751922|ref|ZP_20931125.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440176415|gb|ELP55688.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 260
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALSYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDL 608
++AYH RGL + LG +KAI DL
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADL 229
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+A
Sbjct: 69 DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
I N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQ 188
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 VSPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGE 634
RG LG+H +AI+D + L + + + Y RA Y+ G+
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQ 187
>gi|425450205|ref|ZP_18830037.1| Mom72 protein [Microcystis aeruginosa PCC 7941]
gi|389769061|emb|CCI05989.1| Mom72 protein [Microcystis aeruginosa PCC 7941]
Length = 260
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALSYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDL 608
++AYH RGL + LG +KAI DL
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADL 229
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+A
Sbjct: 69 DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
I N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQ 188
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGE 634
RG LG+H +AI+D + L + + + Y RA Y+ G+
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQ 187
>gi|307591404|ref|YP_003900203.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
gi|306986258|gb|ADN18137.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
Length = 535
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 110/220 (50%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG F +E E A+SDF +AI P A+ R L + +++ DL+K +E P
Sbjct: 84 RGMIHYFFKEYEQALSDFNKAIDIYPQDENAFYNRAFVYWELEQYDQSLSDLAKTIEINP 143
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
S + ++RG++ ++ + ++ A+ DL+ + ++ Y L + +Y +A +
Sbjct: 144 QSVNAYNQRGLLYWELEQYDQALSDLNKAIDINPLFAYPYGNRALVYWKLKKYDQALFNY 203
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
K I+LD A+ + Y L +KA+ +V+ +D + ++AY RGLL + L Q
Sbjct: 204 NKLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYSKVIDLDPQCTEAYEKRGLLYYKLQQ 263
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ K + D S + ++P + R S Y + EY +A++
Sbjct: 264 YDKVLSDYSKAIELNPQDDAEYIARGSFYFELKEYDKALL 303
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 120/245 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AIS + +++ DP EA RG ++ + +SD+++AI+ NP + R
Sbjct: 229 EYDKAISDYSKVIDLDPQCTEAYEKRGLLYYKLQQYDKVLSDYSKAIELNPQDDAEYIAR 288
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L E +A+ D KA+EF+P S + RG + + K++ A+ D + ++++
Sbjct: 289 GSFYFELKEYDKALLDYYKAIEFKPESEVGYYIRGDLYLELKEYEKALFDYNRAIEINPL 348
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
Y G ++ +Y +A + KAI+L E + + Y L + KAL
Sbjct: 349 FIDPYCQRGHIYKALKKYTQALSDYNKAIELYPASAEFYYNRGDLYFQLKDYSKALSDYN 408
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + D F+ AY RG L L ++ +A+ D + + ++P + + Y R S Y + EY
Sbjct: 409 KAIENDADFNDAYSKRGNLYKDLKKYAQALSDYNKAIELNPQDADLYYNRGSIYLELKEY 468
Query: 636 REAVI 640
+AVI
Sbjct: 469 EKAVI 473
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 3/200 (1%)
Query: 415 PEALIG---RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
PE+ +G RG +E E A+ D+ AI+ NP + + +RG AL + +A+ D
Sbjct: 313 PESEVGYYIRGDLYLELKEYEKALFDYNRAIEINPLFIDPYCQRGHIYKALKKYTQALSD 372
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+KA+E P SA+ + RG + F+ KD++ A+ D + ++ D + AY+ G +
Sbjct: 373 YNKAIELYPASAEFYYNRGDLYFQLKDYSKALSDYNKAIENDADFNDAYSKRGNLYKDLK 432
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+Y +A + KAI+L+ + + + Y +L EKA+ L Q + + +AY R
Sbjct: 433 KYAQALSDYNKAIELNPQDADLYYNRGSIYLELKEYEKAVIDLSQAIKFNSESPEAYSKR 492
Query: 592 GLLLHGLGQHKKAIKDLSSG 611
GLL G ++A DL +
Sbjct: 493 GLLCQKAGNKQQARSDLQTA 512
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +Y A+S F++ + P A R + + ++SD + I+ NP
Sbjct: 84 RGMIHYFFKEYEQALSDFNKAIDIYPQDENAFYNRAFVYWELEQYDQSLSDLAKTIEINP 143
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ +RG L + +A+ DL+KA++ P A R +V +K K ++ A+ +
Sbjct: 144 QSVNAYNQRGLLYWELEQYDQALSDLNKAIDINPLFAYPYGNRALVYWKLKKYDQALFNY 203
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD + +AY Y S + EY KA + K I LD EA+ Y L
Sbjct: 204 NKLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYSKVIDLDPQCTEAYEKRGLLYYKLQQ 263
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+K L + + ++ + Y RG L ++ KA+ D + P + Y+R
Sbjct: 264 YDKVLSDYSKAIELNPQDDAEYIARGSFYFELKEYDKALLDYYKAIEFKPESEVGYYIRG 323
Query: 627 SCYHAIGEYREAVI 640
Y + EY +A+
Sbjct: 324 DLYLELKEYEKALF 337
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F R + + +D RG KY A+S +++ ++ P E RG
Sbjct: 337 FDYNRAIEINPLFIDPYCQRGHIYKALKKYTQALSDYNKAIELYPASAEFYYNRGDLYFQ 396
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ A+SD+ +AI+++ +A+ +RG L + +A+ D +KA+E P AD+ +
Sbjct: 397 LKDYSKALSDYNKAIENDADFNDAYSKRGNLYKDLKKYAQALSDYNKAIELNPQDADLYY 456
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG + + K++ AV DLS +K + E+ AY+ GL G ++A
Sbjct: 457 NRGSIYLELKEYEKAVIDLSQAIKFNSESPEAYSKRGLLCQKAGNKQQA----------- 505
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQV 577
R+ L+ L + DL N ++ ++ L+++
Sbjct: 506 RSDLQTAASLFRLRGDLKNYKQIMDVLRKL 535
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 110/235 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +Y +S + + ++ +P I RG+ +E + A+ D+ +AI+ P
Sbjct: 254 RGLLYYKLQQYDKVLSDYSKAIELNPQDDAEYIARGSFYFELKEYDKALLDYYKAIEFKP 313
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + RG L E +A+ D ++A+E P D +RG + K + A+ D
Sbjct: 314 ESEVGYYIRGDLYLELKEYEKALFDYNRAIEINPLFIDPYCQRGHIYKALKKYTQALSDY 373
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L + Y G + +Y KA + KAI+ D +F +A+ Y+DL
Sbjct: 374 NKAIELYPASAEFYYNRGDLYFQLKDYSKALSDYNKAIENDADFNDAYSKRGNLYKDLKK 433
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+AL + + ++ + + Y+ RG + L +++KA+ DLS + + + E
Sbjct: 434 YAQALSDYNKAIELNPQDADLYYNRGSIYLELKEYEKAVIDLSQAIKFNSESPEA 488
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 96/245 (39%), Gaps = 68/245 (27%)
Query: 459 RAALGESVEAIQDLSKALEFEPNS----------------------------------AD 484
+A G+ AI+DL K + F P+ A+
Sbjct: 20 KANRGDLTGAIEDLPKVISFNPSYSEASQTKNTLDKDKDLKKYKNTLSNLAIQINAKLAE 79
Query: 485 ILHERGIVNFKFK-------DFNAAVE---------------------------DLSACV 510
+RG++++ FK DFN A++ DL+ +
Sbjct: 80 TYSKRGMIHYFFKEYEQALSDFNKAIDIYPQDENAFYNRAFVYWELEQYDQSLSDLAKTI 139
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+++ ++ +AY GL + +Y +A KAI ++ F +G+ Y L ++A
Sbjct: 140 EINPQSVNAYNQRGLLYWELEQYDQALSDLNKAIDINPLFAYPYGNRALVYWKLKKYDQA 199
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
L +++ +D + + AYH R L L ++ KAI D S + +DP E R Y+
Sbjct: 200 LFNYNKLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYSKVIDLDPQCTEAYEKRGLLYY 259
Query: 631 AIGEY 635
+ +Y
Sbjct: 260 KLQQY 264
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 19/149 (12%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIEL-AKL----CSLRNWSKAIRILDSLLAQ 65
++L K + + ++L+ +DS +A R +L +KL ++ ++SK I LD +
Sbjct: 191 WKLKKYDQALFNYNKLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYSKVID-LDPQCTE 249
Query: 66 SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
+YE R Y +L+ + V+ D KA++L+P YI +G + L ++AL
Sbjct: 250 AYE-----KRGLLYYKLQQYDKVLSDYSKAIELNPQDDAEYIARGSFYFELKEYDKALLD 304
Query: 126 WEKGYEH------ALHQSADLKQFLELEE 148
+ K E + DL +LEL+E
Sbjct: 305 YYKAIEFKPESEVGYYIRGDL--YLELKE 331
>gi|384207733|ref|YP_005593453.1| hypothetical protein Bint_0239 [Brachyspira intermedia PWS/A]
gi|343385383|gb|AEM20873.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 392
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 123/248 (49%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
NE Y SA+ + +K + + A RG E A+ DF + I+ N + EA+
Sbjct: 55 NEDSYKSAVEDYTWTIKLNDKFAAAYYNRGIINRSLGNSEEALKDFDKTIELNYNLEEAY 114
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
R +A+L + +I+D +KA+E P+ AD + R + ++ A++D ++
Sbjct: 115 YVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALSEYKEAIKDYDKAIEY 174
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ AY G +G + +A + + AI ++R F + + + + + + A+E
Sbjct: 175 NSHFIDAYNNRGNVKEKLGNFNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVE 234
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+++ I+ +++KAY RG++ +G +++AIKD + +D + + Y +A + +
Sbjct: 235 DFDELIKINPKYTKAYLNRGIIAMTMGAYQEAIKDFDKAIELDSNIADAYYNKAVALNHL 294
Query: 633 GEYREAVI 640
G Y EA++
Sbjct: 295 GIYDEAIL 302
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 97/197 (49%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I +++ ++ P + +A R ++ E + AI D+ +AI+ N +A+ RG
Sbjct: 127 YKGSIEDYNKAIEVYPHFADAYYNRALSKNALSEYKEAIKDYDKAIEYNSHFIDAYNNRG 186
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ LG EAI D + A+ AD R F KD+ AVED +K++ +
Sbjct: 187 NVKEKLGNFNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKINPKY 246
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY G+ ++G Y++A + KAI+LD N +A+ + L ++A+ Q
Sbjct: 247 TKAYLNRGIIAMTMGAYQEAIKDFDKAIELDSNIADAYYNKAVALNHLGIYDEAILYYDQ 306
Query: 577 VLYIDKRFSKAYHLRGL 593
+ ++ +S++Y RG+
Sbjct: 307 AIKLNPNYSESYFNRGI 323
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE---YKKAEEAHLKAIQLDRNF 550
FK K++ A+E S +KLD AY A ++I YK A E + I+L+ F
Sbjct: 17 FKSKNYKLAIEYFSEVIKLDSTIYEAYYNRANAKANINNEDSYKSAVEDYTWTIKLNDKF 76
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + + L NSE+AL+ + + ++ +AY++R L +K +I+D +
Sbjct: 77 AAAYYNRGIINRSLGNSEEALKDFDKTIELNYNLEEAYYVRANTKASLKDYKGSIEDYNK 136
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + P + Y RA +A+ EY+EA+
Sbjct: 137 AIEVYPHFADAYYNRALSKNALSEYKEAI 165
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +RG + G + AI + + + + + R A+ ++ + A+ DF E
Sbjct: 179 IDAYNNRGNVKEKLGNFNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDE 238
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I+ NP +A+ RG +G EAI+D KA+E + N AD + + + ++
Sbjct: 239 LIKINPKYTKAYLNRGIIAMTMGAYQEAIKDFDKAIELDSNIADAYYNKAVALNHLGIYD 298
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
A+ +KL+ +Y G++ S KK
Sbjct: 299 EAILYYDQAIKLNPNYSESYFNRGISKSKTAYMKK 333
>gi|254413697|ref|ZP_05027466.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196179294|gb|EDX74289.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 320
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 120/230 (52%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI I+++ ++ P + RG + + + ++ +A++ NPS +A+ R
Sbjct: 34 QYEQAIEIYNKAIQAYPNLALSYYNRGNCFFALNDYQEVLQNYNDALKLNPSYPQAYNNR 93
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G LG+ +AI D ++A++ P + RG + ++ A+ D S ++L+ +
Sbjct: 94 GNTYYLLGDYHQAIADYTQAVKCNPKYERAYYNRGNAYYNLSEYKQALLDFSYAIQLNPD 153
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+Y LG ++ +Y++A +++ KAI ++ N+ +A+ + Y L N +A+
Sbjct: 154 YAESYNNLGNTYIALNQYQQAIDSYDKAIAINPNYAQAYNNRGNSYYYLNNVVQAISNYA 213
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + +D + +AY+ RG + L ++K+A+K+ L + P++IE Y R
Sbjct: 214 KAITLDSQNHEAYNNRGNAYYALQKYKEALKNYDQALTLCPNHIESYYNR 263
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 112/211 (53%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
R+ E AI + +AIQ+ P+ ++ RG AL + E +Q+ + AL+ P+ +
Sbjct: 33 RQYEQAIEIYNKAIQAYPNLALSYYNRGNCFFALNDYQEVLQNYNDALKLNPSYPQAYNN 92
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + D++ A+ D + VK + + + AY G A ++ EYK+A AIQL+
Sbjct: 93 RGNTYYLLGDYHQAIADYTQAVKCNPKYERAYYNRGNAYYNLSEYKQALLDFSYAIQLNP 152
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++ E++ +L Y L ++A++ + + I+ +++AY+ RG + L +AI +
Sbjct: 153 DYAESYNNLGNTYIALNQYQQAIDSYDKAIAINPNYAQAYNNRGNSYYYLNNVVQAISNY 212
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + +D N E R + Y+A+ +Y+EA+
Sbjct: 213 AKAITLDSQNHEAYNNRGNAYYALQKYKEAL 243
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 123/275 (44%), Gaps = 4/275 (1%)
Query: 343 ESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYAS 399
E + L+ ++ ET +A++ ++ + +K+ + LS RG Y
Sbjct: 13 EYKRNLAINYNRQAETLYQARQYEQ-AIEIYNKAIQAYPNLALSYYNRGNCFFALNDYQE 71
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
+ ++ LK +P YP+A RG + AI+D+T+A++ NP A+ RG A
Sbjct: 72 VLQNYNDALKLNPSYPQAYNNRGNTYYLLGDYHQAIADYTQAVKCNPKYERAYYNRGNAY 131
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L E +A+ D S A++ P+ A+ + G + A++ + ++ A
Sbjct: 132 YNLSEYKQALLDFSYAIQLNPDYAESYNNLGNTYIALNQYQQAIDSYDKAIAINPNYAQA 191
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G + + +A + KAI LD EA+ + Y L ++AL+ Q L
Sbjct: 192 YNNRGNSYYYLNNVVQAISNYAKAITLDSQNHEAYNNRGNAYYALQKYKEALKNYDQALT 251
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ ++Y+ RGL+ L Q +KAI DL + +
Sbjct: 252 LCPNHIESYYNRGLVQIKLKQKQKAIADLQQAVKL 286
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y AI +D+ + +P Y +A RG + + + AIS++ +AI + EA+
Sbjct: 169 NQYQQAIDSYDKAIAINPNYAQAYNNRGNSYYYLNNVVQAISNYAKAITLDSQNHEAYNN 228
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A AL + EA+++ +AL PN + + RG+V K K A+ DL VKL +
Sbjct: 229 RGNAYYALQKYKEALKNYDQALTLCPNHIESYYNRGLVQIKLKQKQKAIADLQQAVKLAQ 288
Query: 515 E 515
+
Sbjct: 289 Q 289
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ R+ + + +AI+ +KA++ PN A + RG F D+ +++ + +K
Sbjct: 22 YNRQAETLYQARQYEQAIEIYNKAIQAYPNLALSYYNRGNCFFALNDYQEVLQNYNDALK 81
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+ AY G +G+Y +A +A+ +A+
Sbjct: 82 LNPSYPQAYNNRGNTYYLLGDYHQA---------------------------IADYTQAV 114
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+C + ++ +AY+ RG + L ++K+A+ D S + ++P E + Y A
Sbjct: 115 KC-------NPKYERAYYNRGNAYYNLSEYKQALLDFSYAIQLNPDYAESYNNLGNTYIA 167
Query: 632 IGEYREAV 639
+ +Y++A+
Sbjct: 168 LNQYQQAI 175
>gi|425434489|ref|ZP_18814958.1| Mom72 protein [Microcystis aeruginosa PCC 9432]
gi|389676033|emb|CCH94905.1| Mom72 protein [Microcystis aeruginosa PCC 9432]
Length = 260
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALSYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDL 608
++AYH RGL + LG +KAI DL
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADL 229
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+A
Sbjct: 69 DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
I N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQ 188
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSAQTTPNPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGE 634
RG LG+H +AI+D + L + + + Y RA Y+ G+
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQ 187
>gi|423064372|ref|ZP_17053162.1| tetratricopeptide TPR_2 [Arthrospira platensis C1]
gi|406713615|gb|EKD08783.1| tetratricopeptide TPR_2 [Arthrospira platensis C1]
Length = 608
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 116/253 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + G++ AI+ +D+ L DP A RG A E A+ + +A++ NP
Sbjct: 325 RGLALASLGRFEEAITSYDKTLAVDPSDDSAWYSRGNALMNLGGHEEAVQSYQKALEINP 384
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW G A +LG EAI K+L ++G + A
Sbjct: 385 DHHEAWHNLGGALTSLGRYQEAIVCYDKSLVANSEQDRSWLDKGSALLNLGRYEEAFASY 444
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++++ N A+T L L+ + EY+KA + KA+ ++ N W +L DL +
Sbjct: 445 EKALEVNPSNDLAWTALAGILADLREYQKALTFYEKALSINSNNGLTWYNLGNTLIDLGS 504
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
EKA++C + L+I+ +A++ G L L ++ +A+K L I P E + R
Sbjct: 505 HEKAVQCYENALFINPDDEQAWYNLGNALAVLKRYGEAVKSYDKALAIKPDKHEAWFNRG 564
Query: 627 SCYHAIGEYREAV 639
+ G Y EA+
Sbjct: 565 NALDDWGRYEEAI 577
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 19/274 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ G G+ ++ +++Q+++ P A GRG A A E AI+ F +A++
Sbjct: 168 LTEGNHLYEAGEVERSLELYNQVVELQPNQDSAWYGRGVALADLGRNEEAIASFDKALEI 227
Query: 445 NPSAGE--AWKRRGQARAALGESVEAIQDLSKALEFEPNS-----------------ADI 485
NP + W RG L + +AI +AL PN AD
Sbjct: 228 NPEPEDDGIWISRGNVLVKLNKYKDAITSFDRALAINPNDQQVSQKREDLLNQLNQLADN 287
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L ++ + + + ++E + V++ +N + GLAL+S+G +++A ++ K +
Sbjct: 288 LFDQAMGLYGAGEMERSLELFNQLVEIKPDNFFMWYLRGLALASLGRFEEAITSYDKTLA 347
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+D + AW +L E+A++ Q+ L I+ +A+H G L LG++++AI
Sbjct: 348 VDPSDDSAWYSRGNALMNLGGHEEAVQSYQKALEINPDHHEAWHNLGGALTSLGRYQEAI 407
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + + S +G Y EA
Sbjct: 408 VCYDKSLVANSEQDRSWLDKGSALLNLGRYEEAF 441
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A + G+Y AI +D+ L + + + +G+A E A + + +A++ NPS
Sbjct: 394 GGALTSLGRYQEAIVCYDKSLVANSEQDRSWLDKGSALLNLGRYEEAFASYEKALEVNPS 453
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW A L E +A+ KAL N+ + G AV+
Sbjct: 454 NDLAWTALAGILADLREYQKALTFYEKALSINSNNGLTWYNLGNTLIDLGSHEKAVQCYE 513
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ ++ +++ A+ LG AL+ + Y +A +++ KA+ + + EAW + D
Sbjct: 514 NALFINPDDEQAWYNLGNALAVLKRYGEAVKSYDKALAIKPDKHEAWFNRGNALDDWGRY 573
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
E+A+ + L I+ A H R + L LG+++
Sbjct: 574 EEAIASFDKALAINPHNEAARHNRSVALRNLGRYE 608
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 19/234 (8%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILK--EDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
L R Q G AI+ DQ +K +D + + Q L+ A+S F +A+
Sbjct: 13 LKRAEKQSELGNIDEAIAACDQAIKKSDDNLAYSPWCKKAYLLIQQERLDEALSCFQKAL 72
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
N W + + L EAI+ +A++ +PNS + E+G + + A
Sbjct: 73 NINSRFDPIWHDQAKILVQLNRIDEAIKSYDQAIKIKPNSDSLWIEKGDLLVQQNQTRLA 132
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ ++++ N L L+ + E L N L HL +
Sbjct: 133 ADSYQRALEINPNNHQVSQKLEGLLNQLQE-------------LAENLLTEGNHLYE--- 176
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
E++LE QV+ + A++ RG+ L LG++++AI L I+P
Sbjct: 177 -AGEVERSLELYNQVVELQPNQDSAWYGRGVALADLGRNEEAIASFDKALEINP 229
>gi|332708793|ref|ZP_08428764.1| hypothetical protein LYNGBM3L_32380 [Moorea producens 3L]
gi|332352335|gb|EGJ31904.1| hypothetical protein LYNGBM3L_32380 [Moorea producens 3L]
Length = 421
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI ++ +G AI FD+ L+ +P + EA R AR + + A++D+T+A+Q N
Sbjct: 8 RGIDKIRQGDLNEAIEEFDKALEINPNFAEAYYKRAMARFDLGDQQGALADYTQALQINS 67
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ E + RG AR ALG++ AI+D ++ L+ PN +G K D AA+
Sbjct: 68 ESIEVYFGRGLARLALGDATGAIEDANQILKINPNQPAACKLQGSAYRKLGDNQAAIASF 127
Query: 507 --SACVKLDKENK--------------------------SAYTYLGLALSSIGEYKKAEE 538
+A + LD+++K + + + + + G+Y++A E
Sbjct: 128 KQAAQLYLDQQDKLNCRRCLESINQIQQQQILALGRAQTNDFCHQAINKVNTGKYREALE 187
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+++D +A+ + + L + +A++ L Q + ++ + ++ + RGL+ L
Sbjct: 188 DFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRAIQDLGQAMELNPQDAQVRYHRGLVRIEL 247
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G ++ AI DL+ L +P N + L R + Y +G+YR+A+
Sbjct: 248 GDYRGAIDDLTKLLQSNPENRDVLIHRGNAYIQMGDYRQAI 288
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 11/191 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+ I +VN GKY A+ F+ +L+ DP +A RG + AI D +A++ NP
Sbjct: 172 QAINKVNTGKYREALEDFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRAIQDLGQAMELNP 231
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG R LG+ AI DL+K L+ P + D+L RG + D+ A+ED
Sbjct: 232 QDAQVRYHRGLVRIELGDYRGAIDDLTKLLQSNPENRDVLIHRGNAYIQMGDYRQAIEDY 291
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L + +Y Y A + + A E + +A L + Q QD N
Sbjct: 292 SRVITLKPNDAQSYRYRATAREKFEDLRGAFEDYQQAANL---------YFDQ--QDWTN 340
Query: 567 SEKALECLQQV 577
K L+ L+Q+
Sbjct: 341 YRKLLDKLKQL 351
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 30/244 (12%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
S+SI V F RG+A++ G AI +QILK +P P A +G+A + +AAI
Sbjct: 67 SESIEVYF--GRGLARLALGDATGAIEDANQILKINPNQPAACKLQGSAYRKLGDNQAAI 124
Query: 436 SDFTEAIQ-----------------SNPSAGEAWKRRGQA-----------RAALGESVE 467
+ F +A Q N + G+A + G+ E
Sbjct: 125 ASFKQAAQLYLDQQDKLNCRRCLESINQIQQQQILALGRAQTNDFCHQAINKVNTGKYRE 184
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A++D + LE +P +A RGIV+ K D+ A++DL ++L+ ++ + GL
Sbjct: 185 ALEDFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRAIQDLGQAMELNPQDAQVRYHRGLVR 244
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+G+Y+ A + K +Q + + H Y + + +A+E +V+ + +++
Sbjct: 245 IELGDYRGAIDDLTKLLQSNPENRDVLIHRGNAYIQMGDYRQAIEDYSRVITLKPNDAQS 304
Query: 588 YHLR 591
Y R
Sbjct: 305 YRYR 308
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
E + RG + G+ EAI++ KALE PN A+ ++R + F D A+ D +
Sbjct: 3 EEFYYRGIDKIRQGDLNEAIEEFDKALEINPNFAEAYYKRAMARFDLGDQQGALADYTQA 62
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++++ E+ Y GLA ++G+ A E + ++++ N A Y+ L +++
Sbjct: 63 LQINSESIEVYFGRGLARLALGDATGAIEDANQILKINPNQPAACKLQGSAYRKLGDNQA 122
Query: 570 ALECLQQV--LYIDKR-----------FSKAYHLRGLLLH---------------GLGQH 601
A+ +Q LY+D++ ++ + L L G++
Sbjct: 123 AIASFKQAAQLYLDQQDKLNCRRCLESINQIQQQQILALGRAQTNDFCHQAINKVNTGKY 182
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++A++D + L +DP N + R + +G+YR A+
Sbjct: 183 REALEDFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRAI 220
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R RG+ ++ G Y AI ++L+ +P + LI RG A + AI D++ I
Sbjct: 237 RYHRGLVRIELGDYRGAIDDLTKLLQSNPENRDVLIHRGNAYIQMGDYRQAIEDYSRVIT 296
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
P+ ++++ R AR + A +D +A + D + R +++
Sbjct: 297 LKPNDAQSYRYRATAREKFEDLRGAFEDYQQAANLYFDQQDWTNYRKLLD 346
>gi|75910751|ref|YP_325047.1| hypothetical protein Ava_4554 [Anabaena variabilis ATCC 29413]
gi|75704476|gb|ABA24152.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 547
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 4/222 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G Y +AI+ + Q + + ++ RG A + EAAI D+ +AI+ NP
Sbjct: 293 RGLTYYQLGDYEAAIADYSQAINLNFHDAKSYHKRGLALSQLAAYEAAIDDYNQAIRINP 352
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A +K R +AR+ LG++ AI+D ++A++ P AD RGI + A
Sbjct: 353 HAASIYKNRAEARSHLGDNQGAIEDYTQAIKINPQYADTYKNRGISRYLL----ATQPGF 408
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ + +AY G A + IG+Y A E + +AIQ++ +A+ + DL +
Sbjct: 409 TQAIKINPNDANAYKNRGNARADIGDYAGAIEDYNQAIQINPKAADAYYNRGNARYDLGD 468
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E A+ Q + I+ ++ AY+ RG + G+ + AI D
Sbjct: 469 EEGAIADYTQAIQINPSYADAYYNRGNVRAGIKDKQGAIADF 510
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A+ + G AI + Q +K +P Y + RG +R L A FT+AI+ N
Sbjct: 360 NRAEARSHLGDNQGAIEDYTQAIKINPQYADTYKNRGISRY----LLATQPGFTQAIKIN 415
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+K RG ARA +G+ AI+D ++A++ P +AD + RG + D A+ D
Sbjct: 416 PNDANAYKNRGNARADIGDYAGAIEDYNQAIQINPKAADAYYNRGNARYDLGDEEGAIAD 475
Query: 506 LSACVKLDKENKSAY 520
+ ++++ AY
Sbjct: 476 YTQAIQINPSYADAY 490
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
F Q +K +P A RG ARA + AI D+ +AIQ NP A +A+ RG AR LG
Sbjct: 408 FTQAIKINPNDANAYKNRGNARADIGDYAGAIEDYNQAIQINPKAADAYYNRGNARYDLG 467
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DKENKSA 519
+ AI D ++A++ P+ AD + RG V KD A+ D + KE K A
Sbjct: 468 DEEGAIADYTQAIQINPSYADAYYNRGNVRAGIKDKQGAIADFQKAADIYRKEGKLA 524
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 93/184 (50%), Gaps = 9/184 (4%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I+++F + RG+A Y +AI ++Q ++ +P R AR+ +
Sbjct: 311 SQAINLNFHDAKSYHKRGLALSQLAAYEAAIDDYNQAIRINPHAASIYKNRAEARSHLGD 370
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI D+T+AI+ NP + +K RG +R L ++A++ PN A+ RG
Sbjct: 371 NQGAIEDYTQAIKINPQYADTYKNRGISRYLLATQ----PGFTQAIKINPNDANAYKNRG 426
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D+ A+ED + ++++ + AY G A +G+ + A + +AIQ++ ++
Sbjct: 427 NARADIGDYAGAIEDYNQAIQINPKAADAYYNRGNARYDLGDEEGAIADYTQAIQINPSY 486
Query: 551 LEAW 554
+A+
Sbjct: 487 ADAY 490
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
A GE +I++ S+AL+ N+ ++ ++RG+ ++ D+ AA+ D S + L+ + +Y
Sbjct: 265 AQGEYTASIKNYSQALQASSNNGELYYKRGLTYYQLGDYEAAIADYSQAINLNFHDAKSY 324
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GLALS + Y+ A + + +AI+++ + + + + L +++ A+E Q + I
Sbjct: 325 HKRGLALSQLAAYEAAIDDYNQAIRINPHAASIYKNRAEARSHLGDNQGAIEDYTQAIKI 384
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +++ Y RG+ + L + + I+P++ R + IG+Y A+
Sbjct: 385 NPQYADTYKNRGISRYLLATQ----PGFTQAIKINPNDANAYKNRGNARADIGDYAGAI 439
>gi|425463465|ref|ZP_18842804.1| hypothetical protein MICAH_230001 [Microcystis aeruginosa PCC 9809]
gi|389832747|emb|CCI23369.1| hypothetical protein MICAH_230001 [Microcystis aeruginosa PCC 9809]
Length = 308
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 96/174 (55%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A GKY A++ + Q+++ +P Y +A RG A +E + AI+D+T+A
Sbjct: 3 DAYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQA 62
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ +P+ +A+ RG LGES +AI D ++AL +PN D RGIV+ + +
Sbjct: 63 LSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQ 122
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
A+ D + ++L+ + AY G + +Y+KA + +AI+L+ N + G
Sbjct: 123 AIADYTEAIRLNPKLADAYNKRGDTYYWLKKYQKALTDYEQAIRLNPNLKQVIG 176
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 5/207 (2%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+A RG A + + A++D+T+ I+ NP+ +A+ RG A L ES +AI D ++A
Sbjct: 3 DAYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQA 62
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L +PN D RGIV+ + + A+ D + + LD AY G+ + +GE ++
Sbjct: 63 LSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQ 122
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR---- 591
A + +AI+L+ +A+ Y L +KAL +Q + ++ + R
Sbjct: 123 AIADYTEAIRLNPKLADAYNKRGDTYYWLKKYQKALTDYEQAIRLNPNLKQVIGSRLPSR 182
Query: 592 -GLLLHGLGQHKKAIKDLSSGLGIDPS 617
L +G G +K SS L I PS
Sbjct: 183 LPLPKNGYGVYKFNRGATSSTLKIIPS 209
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 69/121 (57%)
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
AY GLA +G+Y+KA + + I+L+ N+ +A+ + Y L S+KA+ Q L
Sbjct: 4 AYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQAL 63
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+D AY RG++ + LG+ ++AI D + L +DP+ ++ + R ++ +GE ++A
Sbjct: 64 SLDPNLVDAYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQA 123
Query: 639 V 639
+
Sbjct: 124 I 124
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 80/157 (50%)
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
AD RG+ + + A+ D + ++L+ AY GLA + + E +KA + +
Sbjct: 2 ADAYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQ 61
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
A+ LD N ++A+ + + L S++A+ Q L +D AY RG++ + LG+ +
Sbjct: 62 ALSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQ 121
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI D + + ++P + R Y+ + +Y++A+
Sbjct: 122 QAIADYTEAIRLNPKLADAYNKRGDTYYWLKKYQKAL 158
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L ++++ IR L+ A +Y NR Y++L+ + I D +AL LDP L+ AY
Sbjct: 21 ALADYTQVIR-LNPNYADAY-----FNRGLAYNRLKESQKAIADYTQALSLDPNLVDAYF 74
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVT 160
+G + LG ++A+ AD Q L L+ L A +R +
Sbjct: 75 NRGIVHNRLGESQQAI--------------ADYTQALSLDPNLVDAYFNRGIV 113
>gi|330506551|ref|YP_004382979.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328927359|gb|AEB67161.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 261
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 111/220 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG ++G Y AI +D+ L+ DP P A +GTA QR E AI F E I+
Sbjct: 28 LERGNELFSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEEAIQAFDEVIRI 87
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P AW +G A LGE EAI L +A+ EP + I +G + +++ A+
Sbjct: 88 DPELASAWSYKGGALHELGEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQGEYDEALT 147
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++L+ ++ A++ L G+Y++A A + I+L ++ AW + + L
Sbjct: 148 AIEEAIRLEPDSTIAWSLKADILYEQGDYQEAITAVDEVIRLMPDYPAAWSNRGELLWRL 207
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+++LE L + + +D + A++ RG L G+ ++A
Sbjct: 208 ERYDESLEALDRAIQLDSDLADAWYNRGEALKAQGRDEEA 247
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E + RG Q + E AI + EA++ +P AW +G A EAIQ +
Sbjct: 25 EEWLERGNELFSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEEAIQAFDEV 84
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ +P A +G + +++ A+ L + L+ EN S ++ G AL GEY +
Sbjct: 85 IRIDPELASAWSYKGGALHELGEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQGEYDE 144
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A A +AI+L+ + AW + + ++A+ + +V+ + + A+ RG LL
Sbjct: 145 ALTAIEEAIRLEPDSTIAWSLKADILYEQGDYQEAITAVDEVIRLMPDYPAAWSNRGELL 204
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
L ++ ++++ L + +D + Y R A G EA
Sbjct: 205 WRLERYDESLEALDRAIQLDSDLADAWYNRGEALKAQGRDEEA 247
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%)
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+EN + G L S G+Y++A EA+ +A++LD AW + + E+A++
Sbjct: 21 QENAEEWLERGNELFSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEEAIQA 80
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+V+ ID + A+ +G LH LG++ +AI L +G++P N L+ S + G
Sbjct: 81 FDEVIRIDPELASAWSYKGGALHELGEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQG 140
Query: 634 EYREAV 639
EY EA+
Sbjct: 141 EYDEAL 146
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 76/152 (50%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
ERG F D+ A+E ++LD EN A++ G AL + Y++A +A + I++D
Sbjct: 29 ERGNELFSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEEAIQAFDEVIRID 88
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
AW + +L ++A+ L Q + ++ + L+G L+ G++ +A+
Sbjct: 89 PELASAWSYKGGALHELGEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQGEYDEALTA 148
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + ++P + L+A + G+Y+EA+
Sbjct: 149 IEEAIRLEPDSTIAWSLKADILYEQGDYQEAI 180
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y AI DQ + +P +G+A FQ E + A++ EAI+ P + AW
Sbjct: 106 GEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQGEYDEALTAIEEAIRLEPDSTIAWSL 165
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ G+ EAI + + + P+ RG + ++ + ++ ++E L ++LD
Sbjct: 166 KADILYEQGDYQEAITAVDEVIRLMPDYPAAWSNRGELLWRLERYDESLEALDRAIQLDS 225
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ A+ G AL + G ++A+ A+ +A +L
Sbjct: 226 DLADAWYNRGEALKAQGRDEEADVAYTRAKEL 257
>gi|291515779|emb|CBK64989.1| Tetratricopeptide repeat [Alistipes shahii WAL 8301]
Length = 662
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 111/253 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ N A F ++ +P+Y +A R R+ + A+ DF EAI+ P
Sbjct: 66 RGIAKYNLDDLLGAEDDFSTAIRLNPVYTQAYTYRAITRSRLGNYDDALQDFREAIELRP 125
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG R + EAI D K + E AD RG+ KD A E+
Sbjct: 126 DLPGPYYSRGVTRLLNQQFKEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTTRAYENF 185
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ ++EN + Y G +YK+AE KAI+ D +L ++ + Y
Sbjct: 186 NTAIRTNRENPNGYNRRGGLHLQQEQYKEAEADFNKAIECDSAYLLSYFNRALVYNATNR 245
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+AL +V+ +D S Y R +L +G + A++D P+N+ Y RA
Sbjct: 246 PMQALADFDKVIQLDSTNSLTYFNRAMLRTQIGDYNHALEDYDKVALYSPNNVLVYYNRA 305
Query: 627 SCYHAIGEYREAV 639
Y +GE AV
Sbjct: 306 GVYAQLGEIERAV 318
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 4/226 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ ++ ++ AI FD+ ++++ +A I RG + ++ A +F AI++N
Sbjct: 133 SRGVTRLLNQQFKEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTTRAYENFNTAIRTN 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL--HERGIVNFKFKDFNAAV 503
+ RRG + EA D +KA+E + SA +L R +V A+
Sbjct: 193 RENPNGYNRRGGLHLQQEQYKEAEADFNKAIECD--SAYLLSYFNRALVYNATNRPMQAL 250
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D ++LD N Y + + IG+Y A E + K N + + + Y
Sbjct: 251 ADFDKVIQLDSTNSLTYFNRAMLRTQIGDYNHALEDYDKVALYSPNNVLVYYNRAGVYAQ 310
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
L E+A+E + + F+ AY RG L L + A +D S
Sbjct: 311 LGEIERAVEDYTSAIKLYPDFANAYIYRGRLRELLRDPQGAKEDRS 356
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 31/159 (19%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
R + Q +Y +++S + ++ +P P + R T RA +QR
Sbjct: 487 FERAVTQSLIKQYTNSVSTYSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRITI 546
Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ A++D +A++ P A+ R A G EA +D +
Sbjct: 547 DSDPANRLNNNSKRTYSYDEAVADLNKAVKLFPDFAYAYYNRANLLALSGSLPEAFEDYT 606
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
KA+ P A+ + RGI+ KD DLS +L
Sbjct: 607 KAISLNPAFAEAYYNRGIIQLFMKDTRKGCLDLSKAGEL 645
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
L R ++ ++ ++S ++ AI+ NPS + R RA + + + +I + + +
Sbjct: 485 VLFERAVTQSLIKQYTNSVSTYSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRI 544
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ + A+ L+ + + + AV DL+ VKL + AY L+ G +A
Sbjct: 545 TIDSDPANRLNNNSKRTYSYDE---AVADLNKAVKLFPDFAYAYYNRANLLALSGSLPEA 601
Query: 537 EEAHLKAIQLDRNFLEAW---GHLTQFYQD 563
E + KAI L+ F EA+ G + F +D
Sbjct: 602 FEDYTKAISLNPAFAEAYYNRGIIQLFMKD 631
>gi|119512967|ref|ZP_01632028.1| serine/threonine kinase [Nodularia spumigena CCY9414]
gi|119462380|gb|EAW43356.1| serine/threonine kinase [Nodularia spumigena CCY9414]
Length = 713
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 120/245 (48%), Gaps = 2/245 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
KY A++ +DQ ++ P Y EA GRG R QR E AI+ F +A+Q + +A E W
Sbjct: 391 KYEEALAAYDQAIQIQPDYVEAWSGRGFVLRDLQRYPE-AIASFDKALQLDNTAPEIWNA 449
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G+ L + AIQ ++A+E +PN + +G+ K +N A+ ++
Sbjct: 450 KGEIFRNLQQYNNAIQSYNQAIELQPNYYQAWYSKGLAFHNLKQYNDAINAYETAIEFKP 509
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ LG AL ++ + A +A+ KA+Q F AW + L +A+E
Sbjct: 510 DYGQAWYSLGNALFNLNRFDNALKAYDKAVQYRPKFYPAWFSRSNILIILRRYPQAIESF 569
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q + + +A++ RG LH ++++AI + I ++ + Y + + + +
Sbjct: 570 DQAIKHNPNDYQAWYSRGWALHQSQRYEEAIASYNKAAAIKRNDYQIWYNLGNSQYILQK 629
Query: 635 YREAV 639
Y++A+
Sbjct: 630 YQQAI 634
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 123/272 (45%), Gaps = 3/272 (1%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F V I+ +I++ +G +Y A++ + + + P Y G+G +
Sbjct: 332 FIVNSINAHNAIALS---EQGSTLFELQRYQDALAAYQEAVSISPDYVPGWNGQGKTLSQ 388
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ E A++ + +AIQ P EAW RG L EAI KAL+ + + +I +
Sbjct: 389 LKKYEEALAAYDQAIQIQPDYVEAWSGRGFVLRDLQRYPEAIASFDKALQLDNTAPEIWN 448
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G + + +N A++ + ++L A+ GLA ++ +Y A A+ AI+
Sbjct: 449 AKGEIFRNLQQYNNAIQSYNQAIELQPNYYQAWYSKGLAFHNLKQYNDAINAYETAIEFK 508
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++ +AW L +L + AL+ + + +F A+ R +L L ++ +AI+
Sbjct: 509 PDYGQAWYSLGNALFNLNRFDNALKAYDKAVQYRPKFYPAWFSRSNILIILRRYPQAIES 568
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +P++ + Y R H Y EA+
Sbjct: 569 FDQAIKHNPNDYQAWYSRGWALHQSQRYEEAI 600
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N +Y +AI ++Q ++ P Y +A +G A ++ AI+ + AI+ P G+AW
Sbjct: 456 NLQQYNNAIQSYNQAIELQPNYYQAWYSKGLAFHNLKQYNDAINAYETAIEFKPDYGQAW 515
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
G A L A++ KA+++ P R + + + A+E +K
Sbjct: 516 YSLGNALFNLNRFDNALKAYDKAVQYRPKFYPAWFSRSNILIILRRYPQAIESFDQAIKH 575
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ + A+ G AL Y++A ++ KA + RN + W +L L ++A+
Sbjct: 576 NPNDYQAWYSRGWALHQSQRYEEAIASYNKAAAIKRNDYQIWYNLGNSQYILQKYQQAIA 635
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ + +++++ RG L L ++K+AI + P+
Sbjct: 636 SYDKAVRYQTNHAESWYSRGNALLNLQRYKEAIDSYDQAIKYKPN 680
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 76/169 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+A N +Y AI+ ++ ++ P Y +A G A + A+ + +A+Q
Sbjct: 483 SKGLAFHNLKQYNDAINAYETAIEFKPDYGQAWYSLGNALFNLNRFDNALKAYDKAVQYR 542
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW R L +AI+ +A++ PN + RG + + + A+
Sbjct: 543 PKFYPAWFSRSNILIILRRYPQAIESFDQAIKHNPNDYQAWYSRGWALHQSQRYEEAIAS 602
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + + + + LG + + +Y++A ++ KA++ N E+W
Sbjct: 603 YNKAAAIKRNDYQIWYNLGNSQYILQKYQQAIASYDKAVRYQTNHAESW 651
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 25/174 (14%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
+L K + + D+ +++ A + R + L L+ + +AI D L +
Sbjct: 388 QLKKYEEALAAYDQAIQIQPDYVEAWSGRGFV--LRDLQRYPEAIASFDKALQLDNTAPE 445
Query: 72 ICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
I N + + L+ + + I+ ++A++L P QA+ KG AF L + +A++ Y
Sbjct: 446 IWNAKGEIFRNLQQYNNAIQSYNQAIELQPNYYQAWYSKGLAFHNLKQYNDAIN----AY 501
Query: 131 EHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDK 184
E A+ D Q Y + N++ +L ++ L A DK
Sbjct: 502 ETAIEFKPDYGQ------------------AWYSLGNALFNLNRFDNALKAYDK 537
>gi|300870878|ref|YP_003785749.1| hypothetical protein BP951000_1259 [Brachyspira pilosicoli 95/1000]
gi|300688577|gb|ADK31248.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
Length = 233
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 5/189 (2%)
Query: 367 KFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
K+ + +KSI +D S RG + + G+Y AI +D ++ D Y A R
Sbjct: 28 KYEEAIVYYNKSIELDNNYSVAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNR 87
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A+ + E E AI D+ +AI+ + +A+ RG + LG+ EA++D +K +E PN
Sbjct: 88 GLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNILGKYEEAVKDFNKVIELNPN 147
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+D + RG V + A++D ++L+ N + Y G++ ++ EY +A + +
Sbjct: 148 DSDAYYNRGTVKDVLGQYEEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALKDYK 207
Query: 542 KAIQLDRNF 550
KA++LD N+
Sbjct: 208 KALELDPNY 216
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 94/177 (53%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ EAI +K++E + N + + RG V ++ A++D ++LD AY
Sbjct: 27 GKYEEAIVYYNKSIELDNNYSVAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNN 86
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
GLA +GEY++A + + KAI+LD ++ +A+ + L E+A++ +V+ ++
Sbjct: 87 RGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNILGKYEEAVKDFNKVIELNP 146
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
S AY+ RG + LGQ+++AIKD + ++P+N R + EY EA+
Sbjct: 147 NDSDAYYNRGTVKDVLGQYEEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEAL 203
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 98/192 (51%)
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + + E AI + ++I+ + + A+ RG +A LGE EAI+D A+E + N
Sbjct: 24 SLEGKYEEAIVYYNKSIELDNNYSVAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYA 83
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ ++ A++D ++LD + AY G+ + +G+Y++A + K I+
Sbjct: 84 YNNRGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNILGKYEEAVKDFNKVIE 143
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L+ N +A+ + L E+A++ + + ++ Y+ RG+ L ++ +A+
Sbjct: 144 LNPNDSDAYYNRGTVKDVLGQYEEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEAL 203
Query: 606 KDLSSGLGIDPS 617
KD L +DP+
Sbjct: 204 KDYKKALELDPN 215
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ KAI LDS + +Y NR + L ++ ++D +K ++L+P AY
Sbjct: 100 AIKDYDKAIE-LDSDYSDAY-----NNRGIVKNILGKYEEAVKDFNKVIELNPNDSDAYY 153
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G LG+ EEA+ ++K E
Sbjct: 154 NRGTVKDVLGQYEEAIKDYDKAIE 177
>gi|425448155|ref|ZP_18828134.1| Mom72 protein [Microcystis aeruginosa PCC 9443]
gi|389731136|emb|CCI04771.1| Mom72 protein [Microcystis aeruginosa PCC 9443]
Length = 260
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G++ +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GKHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSS 610
++AYH RGL + LG +KAI DL +
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLEA 231
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 2/157 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+A
Sbjct: 69 DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
I N + + + RG A+ LG+ +EAI+D +KAL + I + R + +
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQ 188
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTHYKLGNREKA 225
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGE 634
RG LG+H +AI+D + L + + + Y RA Y+ G+
Sbjct: 140 IYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C I+ + + + DF + RG A+ + GK+ AI + + L + I A A+
Sbjct: 125 CTKAIALNGNFA-DFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYN 183
Query: 429 R--ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
R + E A+ D+ E+++ N + EA+ RG LG +AI DL A
Sbjct: 184 RAGQQEMALRDYNESLKINANFAEAYHNRGLTHYKLGNREKAIADLEAA 232
>gi|13472041|ref|NP_103608.1| hypothetical protein mll2208 [Mesorhizobium loti MAFF303099]
gi|14022786|dbj|BAB49394.1| mll2208 [Mesorhizobium loti MAFF303099]
Length = 551
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 124/268 (46%), Gaps = 5/268 (1%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I ++ LS GI V +G Y AI+ DQ + DP E RG A +++
Sbjct: 86 KAIGINPELSAAYYNNGIILVLKGDYDRAITYLDQAIFLDPDNAEFYYNRGVAWSYKGND 145
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+D+ AI+ NP A+ RG A G+ AI D S+A+ +P +A + RG
Sbjct: 146 ERAIADYDAAIKLNPGDARAYHNRGLNWARKGDKERAIADYSQAISLDPKNASSYNNRGD 205
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D + A+ D + + LD +N AY GL S G+ +A + + I LD
Sbjct: 206 AWDSKGDDDRAMADYNQVIILDTKNAHAYYRRGLIWSRKGDDSRAIADYSQVISLDPTDP 265
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + + ++A+ + + +D + + AY+ RG G +AI D S
Sbjct: 266 SIRYNKGLAWLRKGDGDRAIADFDEAIRLDPKMAAAYYDRGTEWLRKGDRDRAITDYSEV 325
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++P+N L R + +GEY A+
Sbjct: 326 ITLEPTNAMALNDRGFVLNELGEYERAL 353
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 130/260 (50%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ +F +RG+A +G AI+ +D +K +P A RG A + + E AI+D++
Sbjct: 128 NAEFYYNRGVAWSYKGNDERAIADYDAAIKLNPGDARAYHNRGLNWARKGDKERAIADYS 187
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI +P ++ RG A + G+ A+ D ++ + + +A + RG++ + D
Sbjct: 188 QAISLDPKNASSYNNRGDAWDSKGDDDRAMADYNQVIILDTKNAHAYYRRGLIWSRKGDD 247
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ A+ D S + LD + S GLA G+ +A +AI+LD A+
Sbjct: 248 SRAIADYSQVISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRLDPKMAAAYYDRGT 307
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ + ++A+ +V+ ++ + A + RG +L+ LG++++A+ DL+ +G+DP
Sbjct: 308 EWLRKGDRDRAITDYSEVITLEPTNAMALNDRGFVLNELGEYERALADLNRAIGLDPKQA 367
Query: 620 ECLYLRASCYHAIGEYREAV 639
+ RA A G++ A+
Sbjct: 368 KIYSNRAIARAAKGDFAPAL 387
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +G + AI+ + Q++ DP P +G A + + + AI+DF EAI+ +P
Sbjct: 237 RGLIWSRKGDDSRAIADYSQVISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRLDP 296
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG G+ AI D S+ + EP +A L++RG V + ++ A+ DL
Sbjct: 297 KMAAAYYDRGTEWLRKGDRDRAITDYSEVITLEPTNAMALNDRGFVLNELGEYERALADL 356
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--HLTQFYQD- 563
+ + LD + Y+ +A ++ G++ A + +AI LD NF A+ FY
Sbjct: 357 NRAIGLDPKQAKIYSNRAIARAAKGDFAPALADYNQAIALDPNFPNAYAGRGFVNFYSGM 416
Query: 564 LANSE----KALECLQQVLY-------IDKRFSKAYHLR 591
LA +E KA Y ID+R HLR
Sbjct: 417 LAKAEPDFAKAAALAPDNAYLAIWLDIIDRRSGGTSHLR 455
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 106/262 (40%), Gaps = 7/262 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+R A + G A + +D+ + +P A G + + + AI+ +AI
Sbjct: 65 FNRAGALIRRGDNDDAFADYDKAIGINPELSAAYYNNGIILVLKGDYDRAITYLDQAIFL 124
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P E + RG A + G AI D A++ P A H RG+ + D A+
Sbjct: 125 DPDNAEFYYNRGVAWSYKGNDERAIADYDAAIKLNPGDARAYHNRGLNWARKGDKERAIA 184
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S + LD +N S+Y G A S G+ +A + + I LD A+ +
Sbjct: 185 DYSQAISLDPKNASSYNNRGDAWDSKGDDDRAMADYNQVIILDTKNAHAYYRRGLIWSRK 244
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ +A+ QV+ +D + +GL G +AI D + +DP Y
Sbjct: 245 GDDSRAIADYSQVISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRLDPKMAAAYYD 304
Query: 625 RASCY-------HAIGEYREAV 639
R + + AI +Y E +
Sbjct: 305 RGTEWLRKGDRDRAITDYSEVI 326
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 26/271 (9%)
Query: 292 SVNERHGRQTNGTHDVHDKLSSDSASLNDSNT-------NSESYSKSSISDNKSSDSTES 344
S++ ++ N D D D ++ D N N+ +Y + + ++ D + +
Sbjct: 191 SLDPKNASSYNNRGDAWDSKGDDDRAMADYNQVIILDTKNAHAYYRRGLIWSRKGDDSRA 250
Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF----RLS---------RGIAQ 391
+ S + L T + NK R DF RL RG
Sbjct: 251 IADYS-QVISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRLDPKMAAAYYDRGTEW 309
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+ +G AI+ + +++ +P AL RG E E A++D AI +P +
Sbjct: 310 LRKGDRDRAITDYSEVITLEPTNAMALNDRGFVLNELGEYERALADLNRAIGLDPKQAKI 369
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ R ARAA G+ A+ D ++A+ +PN + RG VNF A D +
Sbjct: 370 YSNRAIARAAKGDFAPALADYNQAIALDPNFPNAYAGRGFVNFYSGMLAKAEPDFAKAAA 429
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
L +N YL + L I + + +HL+
Sbjct: 430 LAPDN----AYLAIWLDII-DRRSGGTSHLR 455
>gi|386398767|ref|ZP_10083545.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM1253]
gi|385739393|gb|EIG59589.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM1253]
Length = 461
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG QR L+ A++D+ +AI+ P +AW RG G++ AI+DLS+AL +P
Sbjct: 147 RGVVYTNQRRLDRALADYDQAIKLKPDNAQAWSDRGVTYYLGGDNENAIRDLSEALRLDP 206
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N RG K +V D ++LD + Y GL+L+++GEY KA +
Sbjct: 207 NRPRSYTNRGAAYKKLGQLERSVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADY 266
Query: 541 LKAIQL--DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+A++L NF G +L AL + L ++ F++ Y+ R +L +
Sbjct: 267 DQALRLAPRPNFFANRGDSYHLKGELG---AALSDYEAALKLEPNFAQTYNNRAVLYKKM 323
Query: 599 GQHKKAIKDLSSGLGIDPSN 618
G+ KKA+ D + L +DP N
Sbjct: 324 GERKKALADYETALRLDPGN 343
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
G +A++D+ +A+ + +A RG ++ D N A DLS ++L+ ++ +Y
Sbjct: 86 GGLTQALRDIDRAIALDGKNAKAWRLRGDLLREAGGDLNRAAADLSKAIELNPQDSESYE 145
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G+ ++ +A + +AI+L + +AW Y ++E A+ L + L +D
Sbjct: 146 LRGVVYTNQRRLDRALADYDQAIKLKPDNAQAWSDRGVTYYLGGDNENAIRDLSEALRLD 205
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++Y RG LGQ ++++ D + +DP E R A+GEY +A+
Sbjct: 206 PNRPRSYTNRGAAYKKLGQLERSVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAI 263
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 33/166 (19%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G +AI + L+ DP P + RG A +LE +++D EAI+ +P
Sbjct: 181 RGVTYYLGGDNENAIRDLSEALRLDPNRPRSYTNRGAAYKKLGQLERSVADDGEAIRLDP 240
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKAL------------------------------ 476
E + RG + AA+GE +AI D +AL
Sbjct: 241 KVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFANRGDSYHLKGELGAALSDYE 300
Query: 477 ---EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ EPN A + R ++ K + A+ D ++LD N +A
Sbjct: 301 AALKLEPNFAQTYNNRAVLYKKMGERKKALADYETALRLDPGNDNA 346
>gi|436837943|ref|YP_007323159.1| Tetratricopeptide TPR_2 repeat protein [Fibrella aestuarina BUZ 2]
gi|384069356|emb|CCH02566.1| Tetratricopeptide TPR_2 repeat protein [Fibrella aestuarina BUZ 2]
Length = 450
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 131/264 (49%), Gaps = 16/264 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++ G A+A++ F++ P L RG + + A++DF A++ +
Sbjct: 134 NRGLCKLQLGYSAAALNDFNRASSLSPNDANILTARGNCKNGLNDFRGALADFGLALEKS 193
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A RG +R L + ++ D S+A+E P AD+ ++RG+V + +F+ AV D
Sbjct: 194 PNKTTALSGRGYSRFKLEDYKGSLADFSRAIELAPTDADLFYKRGLVKTRMGEFDNAVVD 253
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ + AY G S G K A K+I++D ++ + ++F
Sbjct: 254 YNKTLELNPNHYKAYFSRGFCRSRTGNAKVALGDLDKSIEMDNRSIQTKAYYSEFI---- 309
Query: 566 NSEKALECLQQVLYIDKRF---------SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++ L V + +R+ + AY +RG+L + G K A+ DL+ + ++P
Sbjct: 310 -TQNMLPLFATV--VQERYKVAELGDDRADAYIVRGMLKNANGDSKPALLDLNRAVELNP 366
Query: 617 SNIECLYLRASCYHAIGEYREAVI 640
++ E ++R ++G+ + A+I
Sbjct: 367 TSAESYFIRGIIRSSLGDQKGAMI 390
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 123/271 (45%), Gaps = 15/271 (5%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
S+ +VDF + GI + N + A+ F + +P + R A+ +++ A+
Sbjct: 23 SQQTAVDF-FNEGIQKSNAKDFTGALQAFTTAIIMNPENAPSYYNRALAKTSLNDIQGAV 81
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
SD +AI+ NP A+ RG R+ L ++ A+QD ++A+E PN A + + RG+ +
Sbjct: 82 SDLDQAIELNPQEANAYLYRGINRSKLEDNRGAMQDFNRAVELSPNDAFLYYNRGLCKLQ 141
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLE 552
AA+ D + L + + T G + + +++ A A++ N L
Sbjct: 142 LGYSAAALNDFNRASSLSPNDANILTARGNCKNGLNDFRGALADFGLALEKSPNKTTALS 201
Query: 553 AWGH----LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
G+ L + LA+ +A+E + + ++ RGL+ +G+ A+ D
Sbjct: 202 GRGYSRFKLEDYKGSLADFSRAIE-------LAPTDADLFYKRGLVKTRMGEFDNAVVDY 254
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ L ++P++ + + R C G + A+
Sbjct: 255 NKTLELNPNHYKAYFSRGFCRSRTGNAKVAL 285
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 36/260 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + A++ F L++ P AL GRG +R + + +++DF+ AI+
Sbjct: 168 ARGNCKNGLNDFRGALADFGLALEKSPNKTTALSGRGYSRFKLEDYKGSLADFSRAIELA 227
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + + +RG + +GE A+ D +K LE PN RG + + A+ D
Sbjct: 228 PTDADLFYKRGLVKTRMGEFDNAVVDYNKTLELNPNHYKAYFSRGFCRSRTGNAKVALGD 287
Query: 506 LSACVKLDK---ENKSAYT------YLGLALSSIGE-YKKAE------EAHL-------- 541
L +++D + K+ Y+ L L + + E YK AE +A++
Sbjct: 288 LDKSIEMDNRSIQTKAYYSEFITQNMLPLFATVVQERYKVAELGDDRADAYIVRGMLKNA 347
Query: 542 ------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+A++L+ E++ L + + A+ + ++ R ++AY+
Sbjct: 348 NGDSKPALLDLNRAVELNPTSAESYFIRGIIRSSLGDQKGAMIDCNSTVRLNPRHAEAYY 407
Query: 590 LRGLLLHGLGQHKKAIKDLS 609
LRGL+ + G DLS
Sbjct: 408 LRGLIRYDTGDEVSGCADLS 427
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 36/187 (19%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD---- 437
D RG+ + G++ +A+ +++ L+ +P + +A RG R+ + A+ D
Sbjct: 232 DLFYKRGLVKTRMGEFDNAVVDYNKTLELNPNHYKAYFSRGFCRSRTGNAKVALGDLDKS 291
Query: 438 -------------------------FTEAIQSNPSAGE-------AWKRRGQARAALGES 465
F +Q E A+ RG + A G+S
Sbjct: 292 IEMDNRSIQTKAYYSEFITQNMLPLFATVVQERYKVAELGDDRADAYIVRGMLKNANGDS 351
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
A+ DL++A+E P SA+ RGI+ D A+ D ++ V+L+ + AY GL
Sbjct: 352 KPALLDLNRAVELNPTSAESYFIRGIIRSSLGDQKGAMIDCNSTVRLNPRHAEAYYLRGL 411
Query: 526 ALSSIGE 532
G+
Sbjct: 412 IRYDTGD 418
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 366 KKFCVTRISKSK--------SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE- 416
+ FC +R +K SI +D R + A +E + + +F +++E E
Sbjct: 271 RGFCRSRTGNAKVALGDLDKSIEMDNRSIQTKAYYSEFITQNMLPLFATVVQERYKVAEL 330
Query: 417 ------ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
A I RG + + + A+ D A++ NP++ E++ RG R++LG+ A+
Sbjct: 331 GDDRADAYIVRGMLKNANGDSKPALLDLNRAVELNPTSAESYFIRGIIRSSLGDQKGAMI 390
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
D + + P A+ + RG++ + D ++S C L + + Y
Sbjct: 391 DCNSTVRLNPRHAEAYYLRGLIRYDTGD------EVSGCADLSRSGELGYV 435
>gi|392408712|ref|YP_006445319.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390621848|gb|AFM23055.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 439
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++ + + +AI F + ++ DP+ + RG A + + AI+D+++A++
Sbjct: 47 NRGVEELKQDRLDAAIDSFTRAVQLDPLDHLSYNNRGVAYKRKGLFDKAIADYSKALEVK 106
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A RG AR G+ A++DLS A + + I+ GIV + D + A++D
Sbjct: 107 PDYYFALANRGTARFKKGDLDGALKDLSDAAKQGKKESAIITTLGIVRKETGDLDQALKD 166
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------DRNFLEAWGHLTQ 559
L V L K+N AY LG +Y KA +++ KA++L E G L +
Sbjct: 167 LKQAVSLAKKNTRAYIALGELYELQKDYSKALDSYTKAVELGDLKEAGPQLKEKIGSLRK 226
Query: 560 FY-QDL----------ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
Y +L N + A+ L I+ FS RGL H +G++K+AI D
Sbjct: 227 TYAMELHQEGLKNYREGNEKHAITIWSAALKIEPDFSPVLRDRGLTYHKIGKYKQAIDDF 286
Query: 609 SSGLGIDPSNIECLYLRASCYH-------AIGEYREAV 639
+ + +PSN E +RA ++ A+ +Y +A+
Sbjct: 287 DTAISKEPSNAELYRVRADAFYRLKQPDRALADYTQAL 324
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 17/239 (7%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG Q L+AAI FT A+Q +P ++ RG A G +AI D SKALE
Sbjct: 45 LYNRGVEELKQDRLDAAIDSFTRAVQLDPLDHLSYNNRGVAYKRKGLFDKAIADYSKALE 104
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P+ L RG FK D + A++DLS K K+ + T LG+ G+ +A
Sbjct: 105 VKPDYYFALANRGTARFKKGDLDGALKDLSDAAKQGKKESAIITTLGIVRKETGDLDQAL 164
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL-----------------QQVLYI 580
+ +A+ L + A+ L + Y+ + KAL+ +++ +
Sbjct: 165 KDLKQAVSLAKKNTRAYIALGELYELQKDYSKALDSYTKAVELGDLKEAGPQLKEKIGSL 224
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
K ++ H GL + G K AI S+ L I+P L R YH IG+Y++A+
Sbjct: 225 RKTYAMELHQEGLKNYREGNEKHAITIWSAALKIEPDFSPVLRDRGLTYHKIGKYKQAI 283
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 131/312 (41%), Gaps = 58/312 (18%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT------ 439
+RG+A +G + AI+ + + L+ P Y AL RGTAR + +L+ A+ D +
Sbjct: 81 NRGVAYKRKGLFDKAIADYSKALEVKPDYYFALANRGTARFKKGDLDGALKDLSDAAKQG 140
Query: 440 ---------------------EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+A++ A K+ +A ALGE E +D SKAL+
Sbjct: 141 KKESAIITTLGIVRKETGDLDQALKDLKQAVSLAKKNTRAYIALGELYELQKDYSKALDS 200
Query: 479 EPNSADI------------------------LHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ ++ LH+ G+ N++ + A+ SA +K++
Sbjct: 201 YTKAVELGDLKEAGPQLKEKIGSLRKTYAMELHQEGLKNYREGNEKHAITIWSAALKIEP 260
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ GL IG+YK+A + AI + + E + + L ++AL
Sbjct: 261 DFSPVLRDRGLTYHKIGKYKQAIDDFDTAISKEPSNAELYRVRADAFYRLKQPDRALADY 320
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY----- 629
Q L ++ R S AY+ RGL+ H KA++D S + DP N RA Y
Sbjct: 321 TQALQLNSRDSIAYNNRGLVYHEQNDLNKALEDYSKAISTDPDNPVFFENRALVYLLKKQ 380
Query: 630 --HAIGEYREAV 639
A+ +YREA+
Sbjct: 381 NQKALEDYREAL 392
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ EG AI+I+ LK +P + L RG + + AI DF AI PS
Sbjct: 236 GLKNYREGNEKHAITIWSAALKIEPDFSPVLRDRGLTYHKIGKYKQAIDDFDTAISKEPS 295
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E ++ R A L + A+ D ++AL+ + + RG+V + D N A+ED S
Sbjct: 296 NAELYRVRADAFYRLKQPDRALADYTQALQLNSRDSIAYNNRGLVYHEQNDLNKALEDYS 355
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ D +N + L + +KA E + +A++L
Sbjct: 356 KAISTDPDNPVFFENRALVYLLKKQNQKALEDYREALRL 394
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 7/156 (4%)
Query: 365 NKKFCVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N+K +T S + I DF RG+ GKY AI FD + ++P E + R
Sbjct: 244 NEKHAITIWSAALKIEPDFSPVLRDRGLTYHKIGKYKQAIDDFDTAISKEPSNAE--LYR 301
Query: 422 GTARAFQR--ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
A AF R + + A++D+T+A+Q N A+ RG + +A++D SKA+ +
Sbjct: 302 VRADAFYRLKQPDRALADYTQALQLNSRDSIAYNNRGLVYHEQNDLNKALEDYSKAISTD 361
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
P++ R +V K A+ED ++L E
Sbjct: 362 PDNPVFFENRALVYLLKKQNQKALEDYREALRLTNE 397
>gi|428298611|ref|YP_007136917.1| hypothetical protein Cal6303_1911 [Calothrix sp. PCC 6303]
gi|428235155|gb|AFZ00945.1| Tetratricopeptide TPR_2 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 1338
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 127/286 (44%), Gaps = 21/286 (7%)
Query: 367 KFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
K + KS + D+ L+R + +G+Y AI+ FD++++ P EA GR
Sbjct: 428 KEAIASYEKSIVVKPDYYKAWLNRAVILAEQGRYDDAIASFDKVIEIHPEANEAWSGRSL 487
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
A ++ AI + + + P E W RG A A + EA+ +A+E +P +
Sbjct: 488 ALLKLGKIPEAIYSYDQTTRLQPYDPENWYHRGVALAENQQYAEAVTSFDEAIEIQPEQS 547
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH--- 540
I H+RG+ + + AV +K N + G AL G+Y++A ++
Sbjct: 548 IIWHQRGLSQLHLQRWEDAVISFQKALKSQPGNHELWYLRGNALEKSGQYQQAIASYDNA 607
Query: 541 ------LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
L A+ +DR ++A HL Q+Y+ + + KALE I+ A+ + +
Sbjct: 608 LELNPSLHAVWIDRGVIQA--HLQQWYEAIVSWNKALE-------IEPNLYLAWFNQAIA 658
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
LG+ ++AI L I+P+ Y R + GE A++
Sbjct: 659 WEKLGETQEAIASYDCALNIEPNFHTAWYNRGVLLASQGELEAAIL 704
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 112/242 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R +A + GK AI +DQ + P PE RG A A ++ A++ F EAI+ P
Sbjct: 485 RSLALLKLGKIPEAIYSYDQTTRLQPYDPENWYHRGVALAENQQYAEAVTSFDEAIEIQP 544
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
W +RG ++ L +A+ KAL+ +P + ++ + RG K + A+
Sbjct: 545 EQSIIWHQRGLSQLHLQRWEDAVISFQKALKSQPGNHELWYLRGNALEKSGQYQQAIASY 604
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ + + G+ + + ++ +A + KA++++ N AW + ++ L
Sbjct: 605 DNALELNPSLHAVWIDRGVIQAHLQQWYEAIVSWNKALEIEPNLYLAWFNQAIAWEKLGE 664
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+++A+ L I+ F A++ RG+LL G+ + AI L I E RA
Sbjct: 665 TQEAIASYDCALNIEPNFHTAWYNRGVLLASQGELEAAILSYDYALQIQSDYWEAWLARA 724
Query: 627 SC 628
+
Sbjct: 725 NT 726
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 8/241 (3%)
Query: 406 QILKEDPMYPEALIGRGTARAFQR-------ELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
Q+ + P +P A IGR A +Q +L AI+ + AI P A E W RG A
Sbjct: 362 QVFIDAPPHPSA-IGRAQAWFYQALKQAKFGDLNGAIASYDTAISITPDAYEYWFNRGLA 420
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
LG EAI K++ +P+ R ++ + ++ A+ +++ E
Sbjct: 421 LFHLGYIKEAIASYEKSIVVKPDYYKAWLNRAVILAEQGRYDDAIASFDKVIEIHPEANE 480
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
A++ LAL +G+ +A ++ + +L E W H + +A+ + +
Sbjct: 481 AWSGRSLALLKLGKIPEAIYSYDQTTRLQPYDPENWYHRGVALAENQQYAEAVTSFDEAI 540
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
I S +H RGL L + + A+ L P N E YLR + G+Y++A
Sbjct: 541 EIQPEQSIIWHQRGLSQLHLQRWEDAVISFQKALKSQPGNHELWYLRGNALEKSGQYQQA 600
Query: 639 V 639
+
Sbjct: 601 I 601
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 36/262 (13%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ ++ +RG+A + G AI+ +++ + P Y +A + R A Q + AI+ F
Sbjct: 410 AYEYWFNRGLALFHLGYIKEAIASYEKSIVVKPDYYKAWLNRAVILAEQGRYDDAIASFD 469
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ I+ +P A EAW R A LG+ EAI + +P + + RG+ + + +
Sbjct: 470 KVIEIHPEANEAWSGRSLALLKLGKIPEAIYSYDQTTRLQPYDPENWYHRGVALAENQQY 529
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AV +++ E + GL+ QL HL +
Sbjct: 530 AEAVTSFDEAIEIQPEQSIIWHQRGLS------------------QL---------HLQR 562
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ E A+ Q+ L + ++LRG L GQ+++AI + L ++PS +
Sbjct: 563 W-------EDAVISFQKALKSQPGNHELWYLRGNALEKSGQYQQAIASYDNALELNPS-L 614
Query: 620 ECLYLRASCYHA-IGEYREAVI 640
+++ A + ++ EA++
Sbjct: 615 HAVWIDRGVIQAHLQQWYEAIV 636
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 373 ISKSKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
+S +K++ ++ L ++ IA G+ AI+ +D L +P + A RG A
Sbjct: 636 VSWNKALEIEPNLYLAWFNQAIAWEKLGETQEAIASYDCALNIEPNFHTAWYNRGVLLAS 695
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
Q ELEAAI + A+Q EAW R A
Sbjct: 696 QGELEAAILSYDYALQIQSDYWEAWLARANTAA 728
>gi|334365803|ref|ZP_08514752.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
gi|313157909|gb|EFR57315.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
Length = 657
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 111/252 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ N A + F ++ +P+Y +A R R+ + A+ DF EAI+ P
Sbjct: 61 RGIAKYNLNDLLGAEADFSTAIRMNPVYTQAYTYRAITRSRLGNYDDALQDFREAIELRP 120
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG R + EAI D K + E AD RG+ KD A ++
Sbjct: 121 DLPGPYYSRGVTRLLNQQFTEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTVRAYDNF 180
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ ++EN + Y G Y +AE KAI+ D +L ++ + Y +
Sbjct: 181 NTAIRTNRENPNGYNRRGGLYMEQKRYPEAEADFNKAIECDSTYLLSYFNRALVYSNTNR 240
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
AL +V+ +D S Y R +L +G + +A++D P+N+ Y RA
Sbjct: 241 PMLALSDFDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRA 300
Query: 627 SCYHAIGEYREA 638
Y +GE +A
Sbjct: 301 GVYAQLGEIEKA 312
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 93/222 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ ++ ++ AI FD+ ++++ +A I RG + ++ A +F AI++N
Sbjct: 128 SRGVTRLLNQQFTEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTVRAYDNFNTAIRTN 187
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RRG EA D +KA+E + R +V A+ D
Sbjct: 188 RENPNGYNRRGGLYMEQKRYPEAEADFNKAIECDSTYLLSYFNRALVYSNTNRPMLALSD 247
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD N Y + + IG+Y +A E + K N + + + Y L
Sbjct: 248 FDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRAGVYAQLG 307
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
EKA E + + F+ AY RG L L + A KD
Sbjct: 308 EIEKAAEDYTSAIKLYPDFANAYIYRGRLRELLRDPQGAKKD 349
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 31/159 (19%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
RG++Q +Y +A++ F ++ +P P + R T RA +QR
Sbjct: 482 FERGVSQALIKQYTNAVNTFSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRITI 541
Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ A++D +AI+ P ++ R RA G EA +D +
Sbjct: 542 DSDPANRLNNNSKRTYSYDEAVADLNKAIKLFPDLAYSYYNRANLRALSGSLPEAFEDYT 601
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
KA+E PN A+ + RGI+ KD D+S +L
Sbjct: 602 KAIELNPNFAEAYYNRGIIQIFMKDTRKGCLDISKAGEL 640
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
L RG ++A ++ A++ F+ AI+ NPS + R RA + + + +I + + +
Sbjct: 480 VLFERGVSQALIKQYTNAVNTFSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRI 539
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-LSSI-GEYK 534
+ + A+ L+ + + + AV DL+ +KL + AY+Y A L ++ G
Sbjct: 540 TIDSDPANRLNNNSKRTYSYDE---AVADLNKAIKLFPD--LAYSYYNRANLRALSGSLP 594
Query: 535 KAEEAHLKAIQLDRNFLEAW 554
+A E + KAI+L+ NF EA+
Sbjct: 595 EAFEDYTKAIELNPNFAEAY 614
>gi|332710566|ref|ZP_08430511.1| serine/threonine protein kinase [Moorea producens 3L]
gi|332350621|gb|EGJ30216.1| serine/threonine protein kinase [Moorea producens 3L]
Length = 726
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 114/243 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A++ +DQ ++ +P Y A GRG +AAI F A++ P+ +AW G
Sbjct: 396 YEEALNAYDQAIQIEPDYSAAWKGRGKTLEQLERYDAAIKAFNSALELQPNDLDAWISLG 455
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ +AI KAL+ +P+S + RG + + AAVE + +
Sbjct: 456 NVQVKSKNYFDAIASFDKALKLKPDSYQAWYRRGWALHNLRRYKAAVESYDRALDYKPNS 515
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A+ G LS++ +YK A +++ +A+Q NF +AW L ++AL Q
Sbjct: 516 AEAWYQRGNDLSNLRKYKDAAKSYQQAVQFQPNFYQAWYSWGNTLNQLGKYQEALGSFDQ 575
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ + + +A++ RG LH + +++ A++ + + + Y R + ++ + Y+
Sbjct: 576 AVKLQPKSYQAWYSRGWTLHQVQRYEDALEAYYKAIKLKSKPYQAWYSRGNTFYKLERYK 635
Query: 637 EAV 639
+A+
Sbjct: 636 DAI 638
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 12/250 (4%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ +++ ++ Y A G+G + E A++ + +AIQ P AWK R
Sbjct: 361 RYEQALDAYNRAVEIRGEYAPAWQGQGKTLFALKYYEEALNAYDQAIQIEPDYSAAWKGR 420
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ L AI+ + ALE +PN D G V K K++ A+ +KL +
Sbjct: 421 GKTLEQLERYDAAIKAFNSALELQPNDLDAWISLGNVQVKSKNYFDAIASFDKALKLKPD 480
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ---DLANSEK--- 569
+ A+ G AL ++ YK A E++ +A+ N EAW YQ DL+N K
Sbjct: 481 SYQAWYRRGWALHNLRRYKAAVESYDRALDYKPNSAEAW------YQRGNDLSNLRKYKD 534
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
A + QQ + F +A++ G L+ LG++++A+ + + P + + Y R
Sbjct: 535 AAKSYQQAVQFQPNFYQAWYSWGNTLNQLGKYQEALGSFDQAVKLQPKSYQAWYSRGWTL 594
Query: 630 HAIGEYREAV 639
H + Y +A+
Sbjct: 595 HQVQRYEDAL 604
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 111/245 (45%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +S G QV Y AI+ FD+ LK P +A RG A R +AA+ +
Sbjct: 448 LDAWISLGNVQVKSKNYFDAIASFDKALKLKPDSYQAWYRRGWALHNLRRYKAAVESYDR 507
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ P++ EAW +RG + L + +A + +A++F+PN + G + +
Sbjct: 508 ALDYKPNSAEAWYQRGNDLSNLRKYKDAAKSYQQAVQFQPNFYQAWYSWGNTLNQLGKYQ 567
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ VKL ++ A+ G L + Y+ A EA+ KAI+L +AW
Sbjct: 568 EALGSFDQAVKLQPKSYQAWYSRGWTLHQVQRYEDALEAYYKAIKLKSKPYQAWYSRGNT 627
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+ L + A+ QQ + +S+A++ G L ++KKAI + P+ E
Sbjct: 628 FYKLERYKDAIASYQQAVNYKPDYSQAWYSLGNALVKRNKYKKAIAAYDKAVRYQPNYRE 687
Query: 621 CLYLR 625
+ R
Sbjct: 688 AIKAR 692
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K S + RG N KY A + Q ++ P + +A G + + A+
Sbjct: 512 KPNSAEAWYQRGNDLSNLRKYKDAAKSYQQAVQFQPNFYQAWYSWGNTLNQLGKYQEALG 571
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
F +A++ P + +AW RG + +A++ KA++ + + RG +K
Sbjct: 572 SFDQAVKLQPKSYQAWYSRGWTLHQVQRYEDALEAYYKAIKLKSKPYQAWYSRGNTFYKL 631
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ + A+ V + A+ LG AL +YKKA A+ KA++ N+ EA
Sbjct: 632 ERYKDAIASYQQAVNYKPDYSQAWYSLGNALVKRNKYKKAIAAYDKAVRYQPNYREA 688
>gi|392413167|ref|YP_006449774.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
gi|390626303|gb|AFM27510.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
Length = 546
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 117/248 (47%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+N+G+ A++I D I+ ++P AL+ RG A+ Q E + A+ D+T AI +P G A
Sbjct: 49 INKGETGQAVAILDGIMLKNPKEVSALVLRGWAKERQDEYDLALHDYTAAIDLDPDYGSA 108
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W+ RG+ A + + A++DL +A E +P++A I+ G++ F +D++ A +
Sbjct: 109 WEMRGRLLARMEDHEGALRDLKRAAELQPHAAAIVASMGLMRFFEQDYDGARTYFDKSSQ 168
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
LD + +SAY ++ A K +Q +A Y +K+L
Sbjct: 169 LDPKEESAYFGRTAIYLEKNDFTSAIAEMDKLLQFQPQSAQALFRRGFAYLKSGQPQKSL 228
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
E + L +D + Y R + KA+KD IDP + L +A+
Sbjct: 229 EDFDKALELDPEMKEIYWYRADAHRAINALDKALKDYQKAASIDPEDSILLLNQATILMM 288
Query: 632 IGEYREAV 639
+G Y EA+
Sbjct: 289 MGRYDEAL 296
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 4/257 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
R + + + SAI+ D++L+ P +AL RG A + + ++ DF +A++
Sbjct: 178 FGRTAIYLEKNDFTSAIAEMDKLLQFQPQSAQALFRRGFAYLKSGQPQKSLEDFDKALEL 237
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P E + R A A+ +A++D KA +P + +L + + ++ A+E
Sbjct: 238 DPEMKEIYWYRADAHRAINALDKALKDYQKAASIDPEDSILLLNQATILMMMGRYDEALE 297
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL--TQFYQ 562
L + L+ +N YT L G Y A + KA+Q+ + + W + ++
Sbjct: 298 MLRQSILLEPDNPLPYTNRALLYLGTGNYLGALKDLNKALQVQPD--DVWLLIKRAHVFK 355
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+A +KAL L V+ +D +A +RG L Q ++AI+DL + + P +
Sbjct: 356 MIARGDKALADLDSVIELDPENHEARLMRGSLYFNDKQLERAIQDLKIAIDLLPEDAAAY 415
Query: 623 YLRASCYHAIGEYREAV 639
L A + G+ EA+
Sbjct: 416 QLLAEAFLKKGDTPEAL 432
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R F+++ + A + F ++ Q +P A+ R + AI ++ K L+F+P
Sbjct: 147 GLMRFFEQDYDGARTYFDKSSQLDPKEESAYFGRTAIYLEKNDFTSAIAEMDKLLQFQPQ 206
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
SA L RG K ++ED ++LD E K Y Y A +I KA + +
Sbjct: 207 SAQALFRRGFAYLKSGQPQKSLEDFDKALELDPEMKEIYWYRADAHRAINALDKALKDYQ 266
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KA +D + + ++ALE L+Q + ++ Y R LL G G +
Sbjct: 267 KAASIDPEDSILLLNQATILMMMGRYDEALEMLRQSILLEPDNPLPYTNRALLYLGTGNY 326
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
A+KDL+ L + P ++ L RA + I
Sbjct: 327 LGALKDLNKALQVQPDDVWLLIKRAHVFKMIA 358
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 105/244 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G+ + E Y A + FD+ + DP A GR + + +AI++ + +Q
Sbjct: 145 SMGLMRFFEQDYDGARTYFDKSSQLDPKEESAYFGRTAIYLEKNDFTSAIAEMDKLLQFQ 204
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + +A RRG A G+ ++++D KALE +P +I R + + A++D
Sbjct: 205 PQSAQALFRRGFAYLKSGQPQKSLEDFDKALELDPEMKEIYWYRADAHRAINALDKALKD 264
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+D E+ L +G Y +A E ++I L+ + + + Y
Sbjct: 265 YQKAASIDPEDSILLLNQATILMMMGRYDEALEMLRQSILLEPDNPLPYTNRALLYLGTG 324
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N AL+ L + L + R + + + KA+ DL S + +DP N E +R
Sbjct: 325 NYLGALKDLNKALQVQPDDVWLLIKRAHVFKMIARGDKALADLDSVIELDPENHEARLMR 384
Query: 626 ASCY 629
S Y
Sbjct: 385 GSLY 388
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 111/249 (44%), Gaps = 10/249 (4%)
Query: 395 GKYASAISIFDQILKEDPMYP-----EALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
G+Y A+ + Q + +P P AL+ GT A+ D +A+Q P
Sbjct: 290 GRYDEALEMLRQSILLEPDNPLPYTNRALLYLGTGNYL-----GALKDLNKALQVQPDDV 344
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+R + +A+ DL +E +P + + RG + F K A++DL
Sbjct: 345 WLLIKRAHVFKMIARGDKALADLDSVIELDPENHEARLMRGSLYFNDKQLERAIQDLKIA 404
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ L E+ +AY L A G+ +A + +A++ + +F A+ L + + ++ ++
Sbjct: 405 IDLLPEDAAAYQLLAEAFLKKGDTPEALKMIGQALKKESSFPAAFVTLGEIHMADSHMDQ 464
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
ALE + L ID +A R L L ++ A++DL +P + + LRA CY
Sbjct: 465 ALEAYSRALTIDPNSFEARMRRAELFIELNNYQNAVQDLEHAAKSNPYSGKVYQLRAMCY 524
Query: 630 HAIGEYREA 638
+G+ +A
Sbjct: 525 ETLGDKEKA 533
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + + G Y A+ ++ L+ P LI R + A++D I+ +
Sbjct: 315 NRALLYLGTGNYLGALKDLNKALQVQPDDVWLLIKRAHVFKMIARGDKALADLDSVIELD 374
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA RG + AIQDL A++ P A K D A++
Sbjct: 375 PENHEARLMRGSLYFNDKQLERAIQDLKIAIDLLPEDAAAYQLLAEAFLKKGDTPEALKM 434
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + +A+ LG + +A EA+ +A+ +D N EA + + +L
Sbjct: 435 IGQALKKESSFPAAFVTLGEIHMADSHMDQALEAYSRALTIDPNSFEARMRRAELFIELN 494
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N + A++ L+ + K Y LR + LG +KA +DL
Sbjct: 495 NYQNAVQDLEHAAKSNPYSGKVYQLRAMCYETLGDKEKARQDL 537
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 34/178 (19%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS-------AGEAW 452
A++ D +++ DP EA + RG+ ++LE AI D AI P EA+
Sbjct: 363 ALADLDSVIELDPENHEARLMRGSLYFNDKQLERAIQDLKIAIDLLPEDAAAYQLLAEAF 422
Query: 453 KRRGQARAAL---GESV------------------------EAIQDLSKALEFEPNSADI 485
++G AL G+++ +A++ S+AL +PNS +
Sbjct: 423 LKKGDTPEALKMIGQALKKESSFPAAFVTLGEIHMADSHMDQALEAYSRALTIDPNSFEA 482
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
R + + ++ AV+DL K + + Y + ++G+ +KA + KA
Sbjct: 483 RMRRAELFIELNNYQNAVQDLEHAAKSNPYSGKVYQLRAMCYETLGDKEKARQDLWKA 540
>gi|189183138|ref|YP_001936923.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
Ikeda]
gi|189179909|dbj|BAG39689.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
Ikeda]
Length = 502
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 127/271 (46%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C K + + D S+G+ G+Y AI FD +K +P P+ +G
Sbjct: 166 CCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEAIENFDLAIKYEPYNPDTYNNKGVCVDKL 225
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + AI F AI+ P+ EA+ +G L + EAI++ A++++ N
Sbjct: 226 GQHQEAIKIFNLAIKYKPNCEEAYLNKGMCLYQLEQYKEAIENFDLAIKYKSNYVGAYLN 285
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G K + A+E+ +K + N Y G L + +Y++A E AI+ +
Sbjct: 286 KGACLSKLEQHQEAIENFDLAIKYELCNPDTYYNKGACLYELRQYQEAVENFDLAIKYNP 345
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
NF +A+ +L ++A+EC + + ++AY+ +G+ L LGQH+ A+++
Sbjct: 346 NFEKAYLSKGACLYELRQYQEAIECCNLAIKYNPNDAEAYYNKGVCLFKLGQHQAAVENY 405
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +P+ ++ Y + C +G+ +EAV
Sbjct: 406 DLAIKYNPNYVDAYYNKGLCLSKLGQAQEAV 436
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 123/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI G+ AI FD +K EA + +G + +L+ AI +F AI+ N
Sbjct: 81 NKGICLDKLGQLQKAIENFDLTIKYKSNCEEAYLSKGVSLGKLGQLQKAIENFDLAIKHN 140
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ +G LG+ EAI+ + A+++EP + D H +G+ K ++ A+E+
Sbjct: 141 INYETAYLNKGICLYKLGQYHEAIECCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEAIEN 200
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K + N Y G+ + +G++++A + AI+ N EA+ + L
Sbjct: 201 FDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIKYKPNCEEAYLNKGMCLYQLE 260
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+E + + AY +G L L QH++AI++ + + N + Y +
Sbjct: 261 QYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPDTYYNK 320
Query: 626 ASCYHAIGEYREAV 639
+C + + +Y+EAV
Sbjct: 321 GACLYELRQYQEAV 334
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 129/265 (48%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K + + D ++G+ G++ AI IF+ +K P EA + +G + + A
Sbjct: 206 KYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIKYKPNCEEAYLNKGMCLYQLEQYKEA 265
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I +F AI+ + A+ +G + L + EAI++ A+++E + D + +G +
Sbjct: 266 IENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPDTYYNKGACLY 325
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + + AVE+ +K + + AY G L + +Y++A E AI+ + N EA+
Sbjct: 326 ELRQYQEAVENFDLAIKYNPNFEKAYLSKGACLYELRQYQEAIECCNLAIKYNPNDAEAY 385
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ L + A+E + + + AY+ +GL L LGQ ++A+++ + +
Sbjct: 386 YNKGVCLFKLGQHQAAVENYDLAIKYNPNYVDAYYNKGLCLSKLGQAQEAVENFNLAIKY 445
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
+P++ E Y + C + + +Y+ A+
Sbjct: 446 NPNDAEAYYNKGLCLYELRQYQAAI 470
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 156/352 (44%), Gaps = 22/352 (6%)
Query: 302 NGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNE 361
N V KL D A L + + S + NK ++ E+ L+ K++ E
Sbjct: 25 NNNQPVQQKLIHDKAILAEKHFYV---GISFLKLNKYQEAIENFD-LAIKYN---PNCAE 77
Query: 362 AKRNKKFCVTRIS-------------KSKSISVDFRLSRGIAQVNEGKYASAISIFDQIL 408
A NK C+ ++ K KS + LS+G++ G+ AI FD +
Sbjct: 78 AYYNKGICLDKLGQLQKAIENFDLTIKYKSNCEEAYLSKGVSLGKLGQLQKAIENFDLAI 137
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
K + Y A + +G + AI AI+ P +A+ +G LG+ EA
Sbjct: 138 KHNINYETAYLNKGICLYKLGQYHEAIECCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEA 197
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I++ A+++EP + D + +G+ K A++ + +K + AY G+ L
Sbjct: 198 IENFDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIKYKPNCEEAYLNKGMCLY 257
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ +YK+A E AI+ N++ A+ + L ++A+E + + Y
Sbjct: 258 QLEQYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPDTY 317
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAV 639
+ +G L+ L Q+++A+++ + +P N E YL + +C + + +Y+EA+
Sbjct: 318 YNKGACLYELRQYQEAVENFDLAIKYNP-NFEKAYLSKGACLYELRQYQEAI 368
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 141/326 (43%), Gaps = 52/326 (15%)
Query: 308 HDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRS--KLSFKWDMLKETSNEAKRN 365
H+ + + ++ N ++Y+ + +K E+ L+ K+ K EA N
Sbjct: 195 HEAIENFDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIKY---KPNCEEAYLN 251
Query: 366 KKFCVTRISKSKS------ISVDFRLSRGIAQVNEG-------KYASAISIFDQILKEDP 412
K C+ ++ + K +++ ++ + A +N+G ++ AI FD +K +
Sbjct: 252 KGMCLYQLEQYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYEL 311
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
P+ +G R+ + A+ +F AI+ NP+ +A+ +G L + EAI+
Sbjct: 312 CNPDTYYNKGACLYELRQYQEAVENFDLAIKYNPNFEKAYLSKGACLYELRQYQEAIECC 371
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+ A+++ PN A+ + +G+ FK AAVE+ +K + AY GL LS +G+
Sbjct: 372 NLAIKYNPNDAEAYYNKGVCLFKLGQHQAAVENYDLAIKYNPNYVDAYYNKGLCLSKLGQ 431
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
++A E AI+ + N E AY+ +G
Sbjct: 432 AQEAVENFNLAIKYNPNDAE----------------------------------AYYNKG 457
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSN 618
L L+ L Q++ AI + + DP+N
Sbjct: 458 LCLYELRQYQAAIANFDLAIKYDPNN 483
>gi|425440193|ref|ZP_18820501.1| Mom72 protein [Microcystis aeruginosa PCC 9717]
gi|389719413|emb|CCH96738.1| Mom72 protein [Microcystis aeruginosa PCC 9717]
Length = 260
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSS 610
++AYH RGL + LG +KAI DL +
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLEA 231
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+A
Sbjct: 69 DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
I N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQ 188
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTHYKLGNREKA 225
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 77/157 (49%), Gaps = 2/157 (1%)
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P A + RG+ D++ A+ D + ++L+ ++ AY G A +G+Y++A
Sbjct: 31 PVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIAD 90
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +A+ ++ N++ A G+ + E A+E + + ++ F+ + RG LG
Sbjct: 91 YTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLG 150
Query: 600 QHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGE 634
+H +AI+D + L + + + Y RA Y+ G+
Sbjct: 151 RHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
>gi|333987253|ref|YP_004519860.1| hypothetical protein MSWAN_1038 [Methanobacterium sp. SWAN-1]
gi|333825397|gb|AEG18059.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 329
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 113/231 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G G+ A+ +D+ L+ +P Y +A +G + E ++ + +A++ N
Sbjct: 82 NKGFIFAKLGQQRDALKCYDKALEINPKYFDAWNNKGGLLTKLGKYEESLKYYNKALELN 141
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW + LG+ E + K LE P D + +G+ + + + A++
Sbjct: 142 PKYLKAWNNKAVVFGKLGKHEEELNCFDKILEMNPEDTDTWYNKGVSLQEMELYQEALKS 201
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KLD+ + SA G+ +G+Y KA E K ++L+ N +E G+ +++L
Sbjct: 202 YDMVLKLDETDLSAINNKGVIFKELGKYNKALECFDKVLELNPNKIETMGNKGITFRELG 261
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++L C ++L ++ ++ +GL L LG+H +AIK + L +DP
Sbjct: 262 KFPESLNCFNKLLKLNPNDKMGWYHKGLALEKLGKHVEAIKSFDNSLKLDP 312
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 123/262 (46%), Gaps = 38/262 (14%)
Query: 382 DFR----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
DF+ L++G+ +N+GKY ++ D+ L+ DP E L +G A + E +I
Sbjct: 6 DFKKRSLLNKGVKLLNQGKYGESLECLDKALELDPNDREILHSKGVALKELGKFEESIKC 65
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F + ++ + AW +G A LG+ +A++ KALE P D + +G
Sbjct: 66 FDKVLELDKKVYSAWNNKGFIFAKLGQQRDALKCYDKALEINPKYFDAWNNKG------- 118
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
GL L+ +G+Y+++ + + KA++L+ +L+AW +
Sbjct: 119 --------------------------GL-LTKLGKYEESLKYYNKALELNPKYLKAWNNK 151
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ L E+ L C ++L ++ + ++ +G+ L + +++A+K L +D +
Sbjct: 152 AVVFGKLGKHEEELNCFDKILEMNPEDTDTWYNKGVSLQEMELYQEALKSYDMVLKLDET 211
Query: 618 NIECLYLRASCYHAIGEYREAV 639
++ + + + +G+Y +A+
Sbjct: 212 DLSAINNKGVIFKELGKYNKAL 233
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 121/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+A GK+ +I FD++L+ D A +G A + A+ + +A++ N
Sbjct: 48 SKGVALKELGKFEESIKCFDKVLELDKKVYSAWNNKGFIFAKLGQQRDALKCYDKALEIN 107
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G LG+ E+++ +KALE P + + +V K +
Sbjct: 108 PKYFDAWNNKGGLLTKLGKYEESLKYYNKALELNPKYLKAWNNKAVVFGKLGKHEEELNC 167
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ E+ + G++L + Y++A +++ ++LD L A + +++L
Sbjct: 168 FDKILEMNPEDTDTWYNKGVSLQEMELYQEALKSYDMVLKLDETDLSAINNKGVIFKELG 227
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
KALEC +VL ++ + +G+ LG+ +++ + L ++P++ Y +
Sbjct: 228 KYNKALECFDKVLELNPNKIETMGNKGITFRELGKFPESLNCFNKLLKLNPNDKMGWYHK 287
Query: 626 ASCYHAIGEYREAV 639
+G++ EA+
Sbjct: 288 GLALEKLGKHVEAI 301
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 77/156 (49%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK+ ++ FD+IL+ +P + +G + + A+ + ++ + + A
Sbjct: 159 GKHEEELNCFDKILEMNPEDTDTWYNKGVSLQEMELYQEALKSYDMVLKLDETDLSAINN 218
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G LG+ +A++ K LE PN + + +GI + F ++ + +KL+
Sbjct: 219 KGVIFKELGKYNKALECFDKVLELNPNKIETMGNKGITFRELGKFPESLNCFNKLLKLNP 278
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+K + + GLAL +G++ +A ++ +++LD +F
Sbjct: 279 NDKMGWYHKGLALEKLGKHVEAIKSFDNSLKLDPDF 314
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ GKY A+ FD++L+ +P E + +G + +++ F + ++ N
Sbjct: 218 NKGVIFKELGKYNKALECFDKVLELNPNKIETMGNKGITFRELGKFPESLNCFNKLLKLN 277
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
P+ W +G A LG+ VEAI+ +L+ +P+
Sbjct: 278 PNDKMGWYHKGLALEKLGKHVEAIKSFDNSLKLDPD 313
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 63/151 (41%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C +I + D ++G++ Y A+ +D +LK D A+ +G
Sbjct: 167 CFDKILEMNPEDTDTWYNKGVSLQEMELYQEALKSYDMVLKLDETDLSAINNKGVIFKEL 226
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+ F + ++ NP+ E +G LG+ E++ +K L+ PN +
Sbjct: 227 GKYNKALECFDKVLELNPNKIETMGNKGITFRELGKFPESLNCFNKLLKLNPNDKMGWYH 286
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+G+ K A++ +KLD + + A
Sbjct: 287 KGLALEKLGKHVEAIKSFDNSLKLDPDFEPA 317
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 3 KRKLLDSRYRL---NKTHKTICEIDELVRVDS----VMASAITARIELAKLCSLRNWSKA 55
KR LL+ +L K +++ +D+ + +D ++ S A EL K ++
Sbjct: 9 KRSLLNKGVKLLNQGKYGESLECLDKALELDPNDREILHSKGVALKELGKF------EES 62
Query: 56 IRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFS 114
I+ D +L ++ N + F +++L + ++ DKAL+++P A+ KG +
Sbjct: 63 IKCFDKVLELDKKVYSAWNNKGFIFAKLGQQRDALKCYDKALEINPKYFDAWNNKGGLLT 122
Query: 115 ALGRKEEALSVWEKGYE 131
LG+ EE+L + K E
Sbjct: 123 KLGKYEESLKYYNKALE 139
>gi|119590339|gb|EAW69933.1| tetratricopeptide repeat domain 13, isoform CRA_e [Homo sapiens]
Length = 700
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 20/249 (8%)
Query: 407 ILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+L+E+P A+ GRG A + + E A+ + + I P E +++R + +
Sbjct: 1 MLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDRPEVFEQRAEILSP 60
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG EA+ DL+KA++ +P SA + RG + F +D+ A ED ++L+K A
Sbjct: 61 LGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAML 119
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRN-----------FLEAWGHLTQFYQDLANSEKA 570
Y GL G K E+ Q RN F E W +L N E A
Sbjct: 120 YKGLTFFHRGLLKNEVESCAVIRQEPRNQRLLKAEEKSDFEELW---RPSMLELGNFEAA 176
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
E Q+ L +++ + LRG++L+ G ++A+K+ L ++P N C Y++ +
Sbjct: 177 TESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHV 236
Query: 631 AIGEYREAV 639
A+G++ E +
Sbjct: 237 AMGQFYEGI 245
>gi|434388288|ref|YP_007098899.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428019278|gb|AFY95372.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 1675
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 2/233 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+AQ + +Y A++ +D+ LK P Y +A G E AIS + ++ N
Sbjct: 537 NKGMAQFHLSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISSYNHTLKLN 596
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW G A G EAI+ KAL F+PN + H RG K + A+
Sbjct: 597 PEFYPAWYNHGMTLAHQGRDAEAIESYDKALGFQPNDPYLWHSRGRALAKLERHAEALTC 656
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + EN + G +L+++G Y A E++ + +QL E W H Q L
Sbjct: 657 FDRSIDILPENYEPWYDRGQSLAALGRYTTALESYDRTLQLRPKDPEIW-HSYGIVQGLR 715
Query: 566 NS-EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
ALE + L I+ F ++++ RG L LG+H+ AI + + I PS
Sbjct: 716 QEYTAALESYDRALAINPNFYQSWYERGNALAELGRHEYAITNYDRAIAILPS 768
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 4/231 (1%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ A+ ++ + K P E RG + A++ +T+A P AW
Sbjct: 376 GELEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYTQATTLAPKDASAWND 435
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A LG A+ KA + EP+ +D + G FK F A+ +L
Sbjct: 436 RGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGKTQFKLGKFETAISSYEQATRLYP 495
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALE 572
E +A+ LG+A + Y+ A ++ + +Q+ F +AW + + QF+ L+ ++AL
Sbjct: 496 EFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQFHQAWYNKGMAQFH--LSQYDRALA 553
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ L + + +A++ G +L LG++++AI + L ++P Y
Sbjct: 554 SYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISSYNHTLKLNPEFYPAWY 604
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + G+Y A+ + + + +P +A G + + E AIS + +A + P
Sbjct: 436 RGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGKTQFKLGKFETAISSYEQATRLYP 495
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW G A+ L AI + L+ +P + +G+ F ++ A+
Sbjct: 496 EFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQFHQAWYNKGMAQFHLSQYDRALASY 555
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+KL + A+ LG L +G Y++A ++ ++L+ F AW +
Sbjct: 556 DRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISSYNHTLKLNPEFYPAWYNHGMTLAHQGR 615
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+E + L +H RG L L +H +A+ + I P N E Y R
Sbjct: 616 DAEAIESYDKALGFQPNDPYLWHSRGRALAKLERHAEALTCFDRSIDILPENYEPWYDRG 675
Query: 627 SCYHAIGEYREAV 639
A+G Y A+
Sbjct: 676 QSLAALGRYTTAL 688
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S GI Q +Y +A+ +D+ L +P + ++ RG A A E AI+++ AI
Sbjct: 707 SYGIVQGLRQEYTAALESYDRALAINPNFYQSWYERGNALAELGRHEYAITNYDRAIAIL 766
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A + +GQ+ L EAI AL P+S D +RG + + ++ A+
Sbjct: 767 PSFAPASQGKGQSLFKLQRYAEAIASYDLALTTAPDSFDCWCQRGYAFWHLESWDEALYS 826
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+KL+ + + G L + Y +A + +AI+L+ +W L + L
Sbjct: 827 YQQALKLNASAAIVWHFQGKTLLKLQRYAEALTVYERAIELNSEDYHSWNDLGLTFAHLG 886
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
SE A++ +Q + + + A+H G L LG A + P + + Y
Sbjct: 887 RSEDAIDSYRQAIELQPDYHPAWHNLGKELTQLGDTDGASAAYERAIAYHPQDADTWYGM 946
Query: 626 ASCYHAIGEYREAVI 640
+ +GE EA+
Sbjct: 947 GNLLWQLGELSEAMF 961
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 410 EDPMYP------EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
E P YP EA +G R+L+ A++ + + I+ P EAW G LG
Sbjct: 79 EPPNYPVATDDPEAWYRQGNLYRDARKLDVALACYNKTIELQPHKQEAWANLGWVLVGLG 138
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
EA+ +ALE P + RG V F+ + A+E+ ++L+ E++ A+
Sbjct: 139 RWEEALASYDRALELRPEDGEAWANRGWVLFQLGYYQQAIENCECSIELNPEDRFAWYQK 198
Query: 524 GLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G AL +G Y +A A+ +A+++ D L G L F+ + + A C +Q L+I
Sbjct: 199 GRALFELGSYDRALAAYDRALEISPDDSLTLSNKGWLL-FH--IGQVQAACGCYEQSLHI 255
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
D A++ G +L LGQ + AI L +D
Sbjct: 256 DPSDRFAWNNHGQVLFQLGQIRAAIDAYQKALELD 290
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G V G++ A++ +D+ L+ P EA RG + AI + +I+ NP
Sbjct: 131 GWVLVGLGRWEEALASYDRALELRPEDGEAWANRGWVLFQLGYYQQAIENCECSIELNPE 190
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW ++G+A LG A+ +ALE P+ + L +G + F AA
Sbjct: 191 DRFAWYQKGRALFELGSYDRALAAYDRALEISPDDSLTLSNKGWLLFHIGQVQAACGCYE 250
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ +D ++ A+ G L +G+ + A +A+ KA++LD F +AW +L + + +
Sbjct: 251 QSLHIDPSDRFAWNNHGQVLFQLGQIRAAIDAYQKALELDSQFYQAWNNLGVAHFEQKSF 310
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ AL C + + + F A+ +G +L LG + A+ + + P
Sbjct: 311 QDALRCYRAAIELAPEFQAAWCNQGKVLFFLGDFEAALAAYTKVTQLQP 359
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 103/233 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G Q GK+ +AIS ++Q + P + A G A+ + EAAI+ + +Q P
Sbjct: 471 GKTQFKLGKFETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQ 530
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+AW +G A+ L + A+ + L+ +P+ + G V F + A+ +
Sbjct: 531 FHQAWYNKGMAQFHLSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISSYN 590
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+KL+ E A+ G+ L+ G +A E++ KA+ N W + L
Sbjct: 591 HTLKLNPEFYPAWYNHGMTLAHQGRDAEAIESYDKALGFQPNDPYLWHSRGRALAKLERH 650
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+AL C + + I + ++ RG L LG++ A++ L + P + E
Sbjct: 651 AEALTCFDRSIDILPENYEPWYDRGQSLAALGRYTTALESYDRTLQLRPKDPE 703
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 108/252 (42%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G + G+Y AIS ++ LK +P + A G A Q AI + +A+ P+
Sbjct: 573 GFVLFHLGRYEEAISSYNHTLKLNPEFYPAWYNHGMTLAHQGRDAEAIESYDKALGFQPN 632
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
W RG+A A L EA+ ++++ P + + ++RG + A+E
Sbjct: 633 DPYLWHSRGRALAKLERHAEALTCFDRSIDILPENYEPWYDRGQSLAALGRYTTALESYD 692
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L ++ + G+ EY A E++ +A+ ++ NF ++W +L
Sbjct: 693 RTLQLRPKDPEIWHSYGIVQGLRQEYTAALESYDRALAINPNFYQSWYERGNALAELGRH 752
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E A+ + + I F+ A +G L L ++ +AI L P + +C R
Sbjct: 753 EYAITNYDRAIAILPSFAPASQGKGQSLFKLQRYAEAIASYDLALTTAPDSFDCWCQRGY 812
Query: 628 CYHAIGEYREAV 639
+ + + EA+
Sbjct: 813 AFWHLESWDEAL 824
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 111/253 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A G Y A++ +D+ L+ P L +G +++AA + +++ +P
Sbjct: 198 KGRALFELGSYDRALAAYDRALEISPDDSLTLSNKGWLLFHIGQVQAACGCYEQSLHIDP 257
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S AW GQ LG+ AI KALE + + G+ +F+ K F A+
Sbjct: 258 SDRFAWNNHGQVLFQLGQIRAAIDAYQKALELDSQFYQAWNNLGVAHFEQKSFQDALRCY 317
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A ++L E ++A+ G L +G+++ A A+ K QL +F AW + L
Sbjct: 318 RAAIELAPEFQAAWCNQGKVLFFLGDFEAALAAYTKVTQLQPDFDRAWNYCGNILFHLGE 377
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E AL + V + + ++ + RG +L L + ++A+ + + P + R
Sbjct: 378 LEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYTQATTLAPKDASAWNDRG 437
Query: 627 SCYHAIGEYREAV 639
+G Y A+
Sbjct: 438 KAMFHLGRYEHAL 450
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 127/268 (47%), Gaps = 3/268 (1%)
Query: 375 KSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++ +I+ +F S RG A G++ AI+ +D+ + P + A G+G + +
Sbjct: 727 RALAINPNFYQSWYERGNALAELGRHEYAITNYDRAIAILPSFAPASQGKGQSLFKLQRY 786
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
AI+ + A+ + P + + W +RG A L EA+ +AL+ ++A + H +G
Sbjct: 787 AEAIASYDLALTTAPDSFDCWCQRGYAFWHLESWDEALYSYQQALKLNASAAIVWHFQGK 846
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K + + A+ ++L+ E+ ++ LGL + +G + A +++ +AI+L ++
Sbjct: 847 TLLKLQRYAEALTVYERAIELNSEDYHSWNDLGLTFAHLGRSEDAIDSYRQAIELQPDYH 906
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
AW +L + L +++ A ++ + + + ++ G LL LG+ +A+
Sbjct: 907 PAWHNLGKELTQLGDTDGASAAYERAIAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQV 966
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ P E Y + A+ ++ AV
Sbjct: 967 TNLKPDRAEAWYRQGKALQALQQWERAV 994
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 95/219 (43%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A++ + Q P A RG A E A+ + +A Q PS +AW G+ +
Sbjct: 415 ALTCYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGKTQ 474
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG+ AI +A P + G+ F + + AA+ +++ + A
Sbjct: 475 FKLGKFETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQFHQA 534
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G+A + +Y +A ++ + ++L ++ +AW +L L E+A+ L
Sbjct: 535 WYNKGMAQFHLSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISSYNHTLK 594
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++ F A++ G+ L G+ +AI+ LG P++
Sbjct: 595 LNPEFYPAWYNHGMTLAHQGRDAEAIESYDKALGFQPND 633
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 113/246 (45%), Gaps = 3/246 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA--ISDFTEAIQSNPSAGEAWK 453
++ A+ +D+ + DP Y A RG A+ FQ + A + + A+ +P+ AW
Sbjct: 1193 RWEDALISYDRATESDPNYALAWYQRGQAQ-FQLHEDPAENLQSYQRALTLDPNHPAAWY 1251
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++G LG A++ +AL+ +P I + G V K ++ A+E + L
Sbjct: 1252 QQGNLLFQLGRLEAAVESYERALQLKPEDYYIWNNHGNVLGSLKRYDCAIESYDKALALK 1311
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
E ++ G AL + Y++A AH +++++ + + W Q + ++AL C
Sbjct: 1312 PEFYQSWHNRGKALFHLKRYEEAAAAHERSLEIHPHNAQIWNGRGMALQHIGCWQEALAC 1371
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
++ + IDK + + RG L L +++ AI + ++P ++ + R +G
Sbjct: 1372 YERSIEIDKLDPQVWLNRGTALFHLHKYEDAIACYDNCAILNPDELQAYHYRGIASLELG 1431
Query: 634 EYREAV 639
+ AV
Sbjct: 1432 RWDAAV 1437
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 4/254 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A + + A+ + ++ P + A +G F + EAA++ +T+ Q P
Sbjct: 301 GVAHFEQKSFQDALRCYRAAIELAPEFQAAWCNQGKVLFFLGDFEAALAAYTKVTQLQPD 360
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW G LGE A++ + +P A+ RG V A+ +
Sbjct: 361 FDRAWNYCGNILFHLGELEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYT 420
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL--TQFYQDLA 565
L ++ SA+ G A+ +G Y+ A + + KA QL+ + +AW +L TQF L
Sbjct: 421 QATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGKTQF--KLG 478
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E A+ +Q + F A++ G+ L +++ AI L I P + Y +
Sbjct: 479 KFETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQFHQAWYNK 538
Query: 626 ASCYHAIGEYREAV 639
+ +Y A+
Sbjct: 539 GMAQFHLSQYDRAL 552
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 4/247 (1%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + +A++ + ++ + P + A G ELE A+ + + P E W
Sbjct: 342 GDFEAALAAYTKVTQLQPDFDRAWNYCGNILFHLGELEPALRRYEMVTKLQPQLAEGWSN 401
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG L EA+ ++A P A ++RG F + A++ +L+
Sbjct: 402 RGNVLLLLDRPQEALTCYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEP 461
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL--TQFYQDLANSEKALE 572
A+ LG +G+++ A ++ +A +L F AW +L QF+ L E A+
Sbjct: 462 SLSDAWNNLGKTQFKLGKFETAISSYEQATRLYPEFYTAWNNLGVAQFH--LQRYEAAIA 519
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
++ L I +F +A++ +G+ L Q+ +A+ L + P + +
Sbjct: 520 SYERTLQIQPQFHQAWYNKGMAQFHLSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHL 579
Query: 633 GEYREAV 639
G Y EA+
Sbjct: 580 GRYEEAI 586
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%)
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
A + + + L DP +P A +G LEAA+ + A+Q P W G
Sbjct: 1230 AENLQSYQRALTLDPNHPAAWYQQGNLLFQLGRLEAAVESYERALQLKPEDYYIWNNHGN 1289
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
+L AI+ KAL +P H RG F K + A +++ N
Sbjct: 1290 VLGSLKRYDCAIESYDKALALKPEFYQSWHNRGKALFHLKRYEEAAAAHERSLEIHPHNA 1349
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
+ G+AL IG +++A + ++I++D+ + W + L E A+ C
Sbjct: 1350 QIWNGRGMALQHIGCWQEALACYERSIEIDKLDPQVWLNRGTALFHLHKYEDAIACYDNC 1409
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++ +AYH RG+ LG+ A+ L + P+
Sbjct: 1410 AILNPDELQAYHYRGIASLELGRWDAAVASFDRALTLSPA 1449
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 117/274 (42%), Gaps = 5/274 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R++ + S D S G ++ A++ ++ L + +A +G A
Sbjct: 996 CYERVTTLTNPSYDLCYSHGQVLTKLNRHQEALACYELALTLNKNAADAWYAKGQTLAAL 1055
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E A S + A+ +P + + +AA G+ A+ +A+E +P++ +I +
Sbjct: 1056 NRWEDANSCYERALSLDPQNQSILYNQSRVQAAQGDWETALVACCQAIELDPDNPEIWTQ 1115
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G ++ + ++N AV L + E+ ++ LG A GE+ A A+ +A++L+
Sbjct: 1116 HGQISIELGNYNTAVASLQTATGIAPESARSWALLGKAEYHRGEFVAALAAYRQALELEP 1175
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ E W L E AL + D ++ A++ RG L H+ ++L
Sbjct: 1176 HRAETWYDRGYLLGQLERWEDALISYDRATESDPNYALAWYQRGQAQFQL--HEDPAENL 1233
Query: 609 SS---GLGIDPSNIECLYLRASCYHAIGEYREAV 639
S L +DP++ Y + + +G AV
Sbjct: 1234 QSYQRALTLDPNHPAAWYQQGNLLFQLGRLEAAV 1267
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 20/262 (7%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + G + A++ +++ ++ D + P+ + RGTA + E AI+ + NP
Sbjct: 1355 RGMALQHIGCWQEALACYERSIEIDKLDPQVWLNRGTALFHLHKYEDAIACYDNCAILNP 1414
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN--------------------SADIL 486
+A+ RG A LG A+ +AL P +A
Sbjct: 1415 DELQAYHYRGIASLELGRWDAAVASFDRALTLSPALDEPEDRVRSQSVPVGKSPLTASTW 1474
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ RG F+ + A+ K+ E+ +T G ++ +Y +A + + ++++
Sbjct: 1475 NSRGTALFQLGNLEGALHSYRQATKVAPEDPLGWTNQGATHLNLQQYAEALQCYQTSLKI 1534
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
D N W Q L + A+ L + + ID +F A + RG + + + A+
Sbjct: 1535 DANDAATWYKQAISQQALGRLDAAIISLTKAVEIDPQFILARYRRGNIYLLQREFEAALT 1594
Query: 607 DLSSGLGIDPSNIECLYLRASC 628
D L +DP R +C
Sbjct: 1595 DYEVTLNLDPDRAAAWNSRGNC 1616
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 3/245 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
IS S+++ ++G + G+ +A ++Q L DP A G ++
Sbjct: 221 ISPDDSLTLS---NKGWLLFHIGQVQAACGCYEQSLHIDPSDRFAWNNHGQVLFQLGQIR 277
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AAI + +A++ + +AW G A +A++ A+E P +G V
Sbjct: 278 AAIDAYQKALELDSQFYQAWNNLGVAHFEQKSFQDALRCYRAAIELAPEFQAAWCNQGKV 337
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
F DF AA+ + +L + A+ Y G L +GE + A + +L E
Sbjct: 338 LFFLGDFEAALAAYTKVTQLQPDFDRAWNYCGNILFHLGELEPALRRYEMVTKLQPQLAE 397
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
W + L ++AL C Q + + + A++ RG + LG+++ A+
Sbjct: 398 GWSNRGNVLLLLDRPQEALTCYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKAT 457
Query: 613 GIDPS 617
++PS
Sbjct: 458 QLEPS 462
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 112/290 (38%), Gaps = 20/290 (6%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R + + L+RG A + KY AI+ +D +P +A RG A
Sbjct: 1371 CYERSIEIDKLDPQVWLNRGTALFHLHKYEDAIACYDNCAILNPDELQAYHYRGIASLEL 1430
Query: 429 RELEAAISDFTEAIQSNPSAGEA--------------------WKRRGQARAALGESVEA 468
+AA++ F A+ +P+ E W RG A LG A
Sbjct: 1431 GRWDAAVASFDRALTLSPALDEPEDRVRSQSVPVGKSPLTASTWNSRGTALFQLGNLEGA 1490
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ +A + P +G + + + A++ +K+D + + + ++
Sbjct: 1491 LHSYRQATKVAPEDPLGWTNQGATHLNLQQYAEALQCYQTSLKIDANDAATWYKQAISQQ 1550
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
++G A + KA+++D F+ A Y E AL + L +D + A+
Sbjct: 1551 ALGRLDAAIISLTKAVEIDPQFILARYRRGNIYLLQREFEAALTDYEVTLNLDPDRAAAW 1610
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ RG L L A+ G++P N E + + + ++ ++ EA
Sbjct: 1611 NSRGNCLLELKILDNALFSFQQATGLEPENSEYWFNQGRAHSSLQQWEEA 1660
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 20/274 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + +Y A + ++ L+ P + GRG A + A++ + +I+ +
Sbjct: 1320 NRGKALFHLKRYEEAAAAHERSLEIHPHNAQIWNGRGMALQHIGCWQEALACYERSIEID 1379
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ W RG A L + +AI P+ H RGI + + ++AAV
Sbjct: 1380 KLDPQVWLNRGTALFHLHKYEDAIACYDNCAILNPDELQAYHYRGIASLELGRWDAAVAS 1439
Query: 506 L------------------SACVKLDKENKSAYTY--LGLALSSIGEYKKAEEAHLKAIQ 545
S V + K +A T+ G AL +G + A ++ +A +
Sbjct: 1440 FDRALTLSPALDEPEDRVRSQSVPVGKSPLTASTWNSRGTALFQLGNLEGALHSYRQATK 1499
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ W + + +L +AL+C Q L ID + ++ + + LG+ AI
Sbjct: 1500 VAPEDPLGWTNQGATHLNLQQYAEALQCYQTSLKIDANDAATWYKQAISQQALGRLDAAI 1559
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L+ + IDP I Y R + Y E+ A+
Sbjct: 1560 ISLTKAVEIDPQFILARYRRGNIYLLQREFEAAL 1593
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 100/265 (37%), Gaps = 20/265 (7%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI +D+ L P + ++ RG A + E A + +++ +P + W R
Sbjct: 1296 RYDCAIESYDKALALKPEFYQSWHNRGKALFHLKRYEEAAAAHERSLEIHPHNAQIWNGR 1355
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A +G EA+ +++E + + RG F + A+ C L+ +
Sbjct: 1356 GMALQHIGCWQEALACYERSIEIDKLDPQVWLNRGTALFHLHKYEDAIACYDNCAILNPD 1415
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA--------------------WG 555
AY Y G+A +G + A + +A+ L E W
Sbjct: 1416 ELQAYHYRGIASLELGRWDAAVASFDRALTLSPALDEPEDRVRSQSVPVGKSPLTASTWN 1475
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
L N E AL +Q + + +G L Q+ +A++ + L ID
Sbjct: 1476 SRGTALFQLGNLEGALHSYRQATKVAPEDPLGWTNQGATHLNLQQYAEALQCYQTSLKID 1535
Query: 616 PSNIECLYLRASCYHAIGEYREAVI 640
++ Y +A A+G A+I
Sbjct: 1536 ANDAATWYKQAISQQALGRLDAAII 1560
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 106/260 (40%), Gaps = 2/260 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDF 438
S D RG A + + A+ + Q LK + +G T QR EA ++ +
Sbjct: 803 SFDCWCQRGYAFWHLESWDEALYSYQQALKLNASAAIVWHFQGKTLLKLQRYAEA-LTVY 861
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
AI+ N +W G A LG S +AI +A+E +P+ H G + D
Sbjct: 862 ERAIELNSEDYHSWNDLGLTFAHLGRSEDAIDSYRQAIELQPDYHPAWHNLGKELTQLGD 921
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A + ++ + +G L +GE +A A+ + L + EAW
Sbjct: 922 TDGASAAYERAIAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPDRAEAWYRQG 981
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ Q L E+A+ C ++V + + G +L L +H++A+ L ++ +
Sbjct: 982 KALQALQQWERAVTCYERVTTLTNPSYDLCYSHGQVLTKLNRHQEALACYELALTLNKNA 1041
Query: 619 IECLYLRASCYHAIGEYREA 638
+ Y + A+ + +A
Sbjct: 1042 ADAWYAKGQTLAALNRWEDA 1061
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A G A+ + Q K P P +G ++ A+ + +++ +
Sbjct: 1476 SRGTALFQLGNLEGALHSYRQATKVAPEDPLGWTNQGATHLNLQQYAEALQCYQTSLKID 1535
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ W ++ ++ ALG AI L+KA+E +P + RG + ++F AA+ D
Sbjct: 1536 ANDAATWYKQAISQQALGRLDAAIISLTKAVEIDPQFILARYRRGNIYLLQREFEAALTD 1595
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ LD + +A+ G L + A + +A L+ E W + + + L
Sbjct: 1596 YEVTLNLDPDRAAAWNSRGNCLLELKILDNALFSFQQATGLEPENSEYWFNQGRAHSSLQ 1655
Query: 566 NSEKALECLQQVLYIDKR 583
E+A C QQ + +R
Sbjct: 1656 QWEEAENCYQQARSLTQR 1673
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 10/251 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-SNPSAGEAWK 453
G+ + A+ ++Q+ P EA +G A ++ E A++ + +NPS +
Sbjct: 954 GELSEAMFAYEQVTNLKPDRAEAWYRQGKALQALQQWERAVTCYERVTTLTNPSYDLCYS 1013
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERG----IVNFKFKDFNAAVEDLSAC 509
GQ L EA+ AL N+AD + +G +N +++D N+ E
Sbjct: 1014 H-GQVLTKLNRHQEALACYELALTLNKNAADAWYAKGQTLAALN-RWEDANSCYER---A 1068
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ LD +N+S ++ G+++ A A +AI+LD + E W Q +L N
Sbjct: 1069 LSLDPQNQSILYNQSRVQAAQGDWETALVACCQAIELDPDNPEIWTQHGQISIELGNYNT 1128
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
A+ LQ I ++++ L G + G+ A+ L ++P E Y R
Sbjct: 1129 AVASLQTATGIAPESARSWALLGKAEYHRGEFVAALAAYRQALELEPHRAETWYDRGYLL 1188
Query: 630 HAIGEYREAVI 640
+ + +A+I
Sbjct: 1189 GQLERWEDALI 1199
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 89/222 (40%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ +AI + + L+ D + +A G A Q+ + A+ + AI+ P AW
Sbjct: 274 GQIRAAIDAYQKALELDSQFYQAWNNLGVAHFEQKSFQDALRCYRAAIELAPEFQAAWCN 333
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G+ LG+ A+ +K + +P+ + G + F + A+ KL
Sbjct: 334 QGKVLFFLGDFEAALAAYTKVTQLQPDFDRAWNYCGNILFHLGELEPALRRYEMVTKLQP 393
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ ++ G L + ++A + +A L AW + L E AL+C
Sbjct: 394 QLAEGWSNRGNVLLLLDRPQEALTCYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCY 453
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++ ++ S A++ G LG+ + AI + P
Sbjct: 454 RKATQLEPSLSDAWNNLGKTQFKLGKFETAISSYEQATRLYP 495
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 102/262 (38%), Gaps = 9/262 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L + + Q+ + ASA +++ + P + G G EL A+ + +
Sbjct: 912 LGKELTQLGDTDGASAA--YERAIAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQVTNL 969
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW R+G+A AL + A+ + S D+ + G V K A+
Sbjct: 970 KPDRAEAWYRQGKALQALQQWERAVTCYERVTTLTNPSYDLCYSHGQVLTKLNRHQEALA 1029
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ L+K A+ G L+++ ++ A + +A+ LD + ++
Sbjct: 1030 CYELALTLNKNAADAWYAKGQTLAALNRWEDANSCYERALSLDPQNQSILYNQSRVQAAQ 1089
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL-- 622
+ E AL Q + +D + + G + LG + A+ L + GI P +
Sbjct: 1090 GDWETALVACCQAIELDPDNPEIWTQHGQISIELGNYNTAVASLQTATGIAPESARSWAL 1149
Query: 623 -----YLRASCYHAIGEYREAV 639
Y R A+ YR+A+
Sbjct: 1150 LGKAEYHRGEFVAALAAYRQAL 1171
>gi|425457014|ref|ZP_18836720.1| Mom72 protein [Microcystis aeruginosa PCC 9807]
gi|389801728|emb|CCI19133.1| Mom72 protein [Microcystis aeruginosa PCC 9807]
Length = 260
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYGELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G++ +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GKHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYDESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSS 610
++AYH RGL + LG +KAI DL +
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADLEA 231
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG ++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+A
Sbjct: 69 DAYYNRGYGELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
I N + + + RG A+ LG+ +EAI+D +KAL + I + R + +
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQ 188
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D +K++ AY GL +G +KA
Sbjct: 189 EMALRDYDESLKINANFAEAYHNRGLTYYKLGNREKA 225
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G
Sbjct: 20 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYGEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGE 634
RG LG+H +AI+D + L + + + Y RA Y+ G+
Sbjct: 140 IYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
>gi|17228118|ref|NP_484666.1| hypothetical protein alr0622 [Nostoc sp. PCC 7120]
gi|17129968|dbj|BAB72580.1| alr0622 [Nostoc sp. PCC 7120]
Length = 547
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 4/222 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ G Y +AI+ + Q + + ++ RG A + EAAI D+ +AI+ NP
Sbjct: 293 RGLSYYQLGDYEAAIADYSQAININLHDAKSYHKRGLALSQLAAYEAAIDDYNQAIRINP 352
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A +K R +AR+ LG++ AI+D ++A++ P AD RGI + A
Sbjct: 353 HAASIYKNRAEARSHLGDNQGAIEDYTQAIKINPQYADTYKNRGISRYLL----ATQPGF 408
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ + +AY G A + IG+Y A E + +AIQ++ +A+ + DL +
Sbjct: 409 TQAIKINPNDANAYKNRGNARADIGDYLGAIEDYNQAIQINPKAADAYYNRGNARYDLGD 468
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E A+ Q + I+ ++ AY+ RG + G+ + AI D
Sbjct: 469 EEGAIADYTQAIQINPSYADAYYNRGNVRAGIKDKQGAIADF 510
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A+ + G AI + Q +K +P Y + RG +R L A FT+AI+ N
Sbjct: 360 NRAEARSHLGDNQGAIEDYTQAIKINPQYADTYKNRGISRY----LLATQPGFTQAIKIN 415
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+K RG ARA +G+ + AI+D ++A++ P +AD + RG + D A+ D
Sbjct: 416 PNDANAYKNRGNARADIGDYLGAIEDYNQAIQINPKAADAYYNRGNARYDLGDEEGAIAD 475
Query: 506 LSACVKLDKENKSAY 520
+ ++++ AY
Sbjct: 476 YTQAIQINPSYADAY 490
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
F Q +K +P A RG ARA + AI D+ +AIQ NP A +A+ RG AR LG
Sbjct: 408 FTQAIKINPNDANAYKNRGNARADIGDYLGAIEDYNQAIQINPKAADAYYNRGNARYDLG 467
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DKENKSA 519
+ AI D ++A++ P+ AD + RG V KD A+ D + KE K A
Sbjct: 468 DEEGAIADYTQAIQINPSYADAYYNRGNVRAGIKDKQGAIADFQKAADIYRKEGKLA 524
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 138/303 (45%), Gaps = 26/303 (8%)
Query: 354 MLKETSNEAKRN-----KKFCVTRISKSKSISVDFRLSRGIAQVNEG-------KYASAI 401
+KE NEA+ + F T++ K K+ ++ F GI Q+ G + A
Sbjct: 146 FIKEDVNEAQSSYHLLLAGFLPTQMIKLKTGNISF----GIEQLLYGGGLWGYLEQLQAS 201
Query: 402 SIFDQILKEDPMY-----PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
+ + Q + P+Y PE L ++ + L I + Q + + + G
Sbjct: 202 ANYHQFQQSPPIYQYKPQPELLSKINQTQSIKPALFTGIKNILPYRQQE-AINIDYIKIG 260
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A GE +I++ S+AL+ ++ ++ ++RG+ ++ D+ AA+ D S + ++ +
Sbjct: 261 DECFAQGEYTASIKNYSQALQASSDNCELYYKRGLSYYQLGDYEAAIADYSQAININLHD 320
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+Y GLALS + Y+ A + + +AI+++ + + + + L +++ A+E Q
Sbjct: 321 AKSYHKRGLALSQLAAYEAAIDDYNQAIRINPHAASIYKNRAEARSHLGDNQGAIEDYTQ 380
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ I+ +++ Y RG+ + L + + I+P++ R + IG+Y
Sbjct: 381 AIKINPQYADTYKNRGISRYLLATQ----PGFTQAIKINPNDANAYKNRGNARADIGDYL 436
Query: 637 EAV 639
A+
Sbjct: 437 GAI 439
>gi|425460167|ref|ZP_18839649.1| Mom72 protein [Microcystis aeruginosa PCC 9808]
gi|389827162|emb|CCI21743.1| Mom72 protein [Microcystis aeruginosa PCC 9808]
Length = 260
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL PN + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYDESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSS 610
++AYH RGL + LG +KAI DL +
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLEA 231
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A++ G+Y AI+ + Q L +P Y AL R ++ EAA+ D T+A
Sbjct: 69 DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
I N + + + RG A+ LG +EAI+D +KAL + I + R + +
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQ 188
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D +K++ AY GL +G +KA
Sbjct: 189 EMALRDYDESLKINANFAEAYHNRGLTHYKLGNREKA 225
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGE 634
RG LG+H +AI+D + L + + + Y RA Y+ G+
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
>gi|34762717|ref|ZP_00143707.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27887616|gb|EAA24695.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 558
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%)
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A + E AI D+ AI+ NP+ + RG+ L + +AI D +KA++ PN +
Sbjct: 60 AVDDDFEKAIEDYNRAIELNPNNTSYYYNRGKVFYNLKKYKKAITDFNKAIKLNPNDKEY 119
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG + FN A+ D + + +N+ Y G A +++G + KA KAI+
Sbjct: 120 FYIRGSSYYNLNIFNKAIIDFDKAIMITSDNEDYYNSRGSAYANLGNFNKAIADFNKAIE 179
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L+ NF +A+ + Y L N ++A+ + + ++ Y+ RGL + +K AI
Sbjct: 180 LNPNFSDAYNNRGITYAYLKNYKEAIVNFNKAIDLNPSDEGYYYNRGLAYNNFNNYKMAI 239
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ + ++P+ R Y + Y+EA++
Sbjct: 240 INFDKAIELNPNFSVAYNNRGITYAYLKNYKEAIV 274
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ +RG N KY AI+ F++ +K +P E RG++ AI DF +AI
Sbjct: 85 YYYNRGKVFYNLKKYKKAITDFNKAIKLNPNDKEYFYIRGSSYYNLNIFNKAIIDFDKAI 144
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ + RG A A LG +AI D +KA+E PN +D + RGI K++ A
Sbjct: 145 MITSDNEDYYNSRGSAYANLGNFNKAIADFNKAIELNPNFSDAYNNRGITYAYLKNYKEA 204
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ + + + L+ ++ Y GLA ++ YK A KAI+L+ NF A+ + Y
Sbjct: 205 IVNFNKAIDLNPSDEGYYYNRGLAYNNFNNYKMAIINFDKAIELNPNFSVAYNNRGITYA 264
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
L N ++A+ + + ++ S A++L+ + + + K
Sbjct: 265 YLKNYKEAIVNFDKAIDLNPSDSLAFNLKEITIEIFEKEK 304
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D+ SRG A N G + AI+ F++ ++ +P + +A RG A+ + + AI +F +A
Sbjct: 152 DYYNSRGSAYANLGNFNKAIADFNKAIELNPNFSDAYNNRGITYAYLKNYKEAIVNFNKA 211
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I NPS + RG A AI + KA+E PN + + RGI K++
Sbjct: 212 IDLNPSDEGYYYNRGLAYNNFNNYKMAIINFDKAIELNPNFSVAYNNRGITYAYLKNYKE 271
Query: 502 AVEDLSACVKLDKENKSAY 520
A+ + + L+ + A+
Sbjct: 272 AIVNFDKAIDLNPSDSLAF 290
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 49/221 (22%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNF----------KFK-----DFNAAVEDLSACVKLD 513
I++ SK +E PN A + RG + KF+ DF A+ED + ++L+
Sbjct: 20 IEEYSKKIEKNPNDASNYYNRGNAYYNRGNTFISLEKFQEAVDDDFEKAIEDYNRAIELN 79
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE-------AWGHLTQF------ 560
N S Y G ++ +YKKA KAI+L+ N E ++ +L F
Sbjct: 80 PNNTSYYYNRGKVFYNLKKYKKAITDFNKAIKLNPNDKEYFYIRGSSYYNLNIFNKAIID 139
Query: 561 ---------------------YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
Y +L N KA+ + + ++ FS AY+ RG+ L
Sbjct: 140 FDKAIMITSDNEDYYNSRGSAYANLGNFNKAIADFNKAIELNPNFSDAYNNRGITYAYLK 199
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+K+AI + + + ++PS+ Y R Y+ Y+ A+I
Sbjct: 200 NYKEAIVNFNKAIDLNPSDEGYYYNRGLAYNNFNNYKMAII 240
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 17/156 (10%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE 68
S Y LN +K I + D+ + + S +R + +L N++KAI + + +
Sbjct: 126 SYYNLNIFNKAIIDFDKAIMITSDNEDYYNSR--GSAYANLGNFNKAIADFNKAIELNPN 183
Query: 69 IQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
D NR Y+ L+ +K I + +KA+ L+P+ Y +G A++ + A+ ++
Sbjct: 184 FSDAYNNRGITYAYLKNYKEAIVNFNKAIDLNPSDEGYYYNRGLAYNNFNNYKMAIINFD 243
Query: 128 KGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEY 163
K +EL + A +R +T Y
Sbjct: 244 KA--------------IELNPNFSVAYNNRGITYAY 265
>gi|427708152|ref|YP_007050529.1| hypothetical protein Nos7107_2781 [Nostoc sp. PCC 7107]
gi|427360657|gb|AFY43379.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 539
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 117/226 (51%), Gaps = 4/226 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ G YA AI+ + Q ++ + + I RG A + AAI D+T+AI+ NP
Sbjct: 285 RGLSYYQLGDYAEAIADYSQAIQINLNDAKFYIKRGLANYQLGDYIAAIDDYTQAIRLNP 344
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+K R AR+ LG++ AI+D ++AL+ PN A RG+ + F +
Sbjct: 345 NMAVAYKNRADARSHLGDNQGAIEDYTQALKINPNYAITYKNRGMSRY----FLGYQQSF 400
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +K++ ++ AY G A + IG+Y+ A + + + I ++ + A+ + D+ +
Sbjct: 401 TKAIKINPQDAIAYKNRGNARADIGDYEGAIDDYTQVIAINPHDAHAYYNRGNARYDMGD 460
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ A E Q + I+ ++ AY+ RG + +G ++AI D +
Sbjct: 461 NAGAFEDYTQAIKINPNYADAYYNRGNVQSEIGDQQEAIADFQKAV 506
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 119/246 (48%), Gaps = 4/246 (1%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+Y AI+ + Q LK E RG + + AI+D+++AIQ N + + +
Sbjct: 258 KGEYTDAIAHYSQALKLYQNDAEIYYQRGLSYYQLGDYAEAIADYSQAIQINLNDAKFYI 317
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+RG A LG+ + AI D ++A+ PN A R D A+ED + +K++
Sbjct: 318 KRGLANYQLGDYIAAIDDYTQAIRLNPNMAVAYKNRADARSHLGDNQGAIEDYTQALKIN 377
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
Y G++ +G +++ KAI+++ A+ + D+ + E A++
Sbjct: 378 PNYAITYKNRGMSRYFLG----YQQSFTKAIKINPQDAIAYKNRGNARADIGDYEGAIDD 433
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
QV+ I+ + AY+ RG + +G + A +D + + I+P+ + Y R + IG
Sbjct: 434 YTQVIAINPHDAHAYYNRGNARYDMGDNAGAFEDYTQAIKINPNYADAYYNRGNVQSEIG 493
Query: 634 EYREAV 639
+ +EA+
Sbjct: 494 DQQEAI 499
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F + RG+A G Y +AI + Q ++ +P A R AR+ + + AI D+T+A+
Sbjct: 315 FYIKRGLANYQLGDYIAAIDDYTQAIRLNPNMAVAYKNRADARSHLGDNQGAIEDYTQAL 374
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP+ +K RG +R LG Q +KA++ P A RG D+ A
Sbjct: 375 KINPNYAITYKNRGMSRYFLGYQ----QSFTKAIKINPQDAIAYKNRGNARADIGDYEGA 430
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
++D + + ++ + AY G A +G+ A E + +AI+++ N+ +A+ +
Sbjct: 431 IDDYTQVIAINPHDAHAYYNRGNARYDMGDNAGAFEDYTQAIKINPNYADAYYNRGNVQS 490
Query: 563 DLANSEKALECLQQVL 578
++ + ++A+ Q+ +
Sbjct: 491 EIGDQQEAIADFQKAV 506
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
F + +K +P A RG ARA + E AI D+T+ I NP A+ RG AR +G
Sbjct: 400 FTKAIKINPQDAIAYKNRGNARADIGDYEGAIDDYTQVIAINPHDAHAYYNRGNARYDMG 459
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++ A +D ++A++ PN AD + RG V + D A+ D V+L
Sbjct: 460 DNAGAFEDYTQAIKINPNYADAYYNRGNVQSEIGDQQEAIADFQKAVEL 508
>gi|427738006|ref|YP_007057550.1| hypothetical protein Riv7116_4584 [Rivularia sp. PCC 7116]
gi|427373047|gb|AFY57003.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 247
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 88/160 (55%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G ++ +G Y AI+ ++++ +P A RG ARA ++ + AI+DFT+ IQ NP+
Sbjct: 56 GNKRLEKGDYQGAIADLTKVIQINPQLAPAYYNRGVARAQLQDNQGAIADFTKVIQFNPN 115
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+ RG A L ++ AI D +K ++F PN +ERG K +D+ A+ D S
Sbjct: 116 DTEAYYNRGVALHQLQDNQGAIADFTKVIQFNPNDFKAYNERGNARLKLRDYQTAIADFS 175
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++++ + Y G+A S + +Y+ A KAIQL+
Sbjct: 176 KAIQINPKIDITYYNRGIARSRLEDYQTAIADFTKAIQLN 215
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 329 SKSSISDNKSSDSTESRSKLSF----KWDMLKETSNEAKRNKK--FCVTRISKSKSISVD 382
SK++ + S++ + SKL D L+ N KR +K + +K I ++
Sbjct: 20 SKANATGLPSTNQLKPESKLQLAQANPQDALEYFKNGNKRLEKGDYQGAIADLTKVIQIN 79
Query: 383 FRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+L+ RG+A+ AI+ F ++++ +P EA RG A ++ + AI+D
Sbjct: 80 PQLAPAYYNRGVARAQLQDNQGAIADFTKVIQFNPNDTEAYYNRGVALHQLQDNQGAIAD 139
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
FT+ IQ NP+ +A+ RG AR L + AI D SKA++ P + RGI + +
Sbjct: 140 FTKVIQFNPNDFKAYNERGNARLKLRDYQTAIADFSKAIQINPKIDITYYNRGIARSRLE 199
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
D+ A+ D + ++L+ ++ AY G+A + ++K
Sbjct: 200 DYQTAIADFTKAIQLNPQSDIAYYNRGVARRKLKAHRK 237
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%)
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q+NP + + G R G+ AI DL+K ++ P A + RG+ + +D A
Sbjct: 43 QANPQDALEYFKNGNKRLEKGDYQGAIADLTKVIQINPQLAPAYYNRGVARAQLQDNQGA 102
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + ++ + + AY G+AL + + + A K IQ + N +A+
Sbjct: 103 IADFTKVIQFNPNDTEAYYNRGVALHQLQDNQGAIADFTKVIQFNPNDFKAYNERGNARL 162
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
L + + A+ + + I+ + Y+ RG+ L ++ AI D + + ++P +
Sbjct: 163 KLRDYQTAIADFSKAIQINPKIDITYYNRGIARSRLEDYQTAIADFTKAIQLNPQSDIAY 222
Query: 623 YLRASCYHAIGEYRE 637
Y R + +R+
Sbjct: 223 YNRGVARRKLKAHRK 237
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+ A+ DL+ ++++ + AY G+A + + + + A K IQ + N EA+ +
Sbjct: 64 DYQGAIADLTKVIQINPQLAPAYYNRGVARAQLQDNQGAIADFTKVIQFNPNDTEAYYNR 123
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
L +++ A+ +V+ + KAY+ RG L ++ AI D S + I+P
Sbjct: 124 GVALHQLQDNQGAIADFTKVIQFNPNDFKAYNERGNARLKLRDYQTAIADFSKAIQINPK 183
Query: 618 NIECLYLRASCYHAIGEYREAV 639
Y R + +Y+ A+
Sbjct: 184 IDITYYNRGIARSRLEDYQTAI 205
>gi|124024552|ref|YP_001018859.1| hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
9303]
gi|123964838|gb|ABM79594.1| Hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
9303]
Length = 581
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 121/232 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ R A+ + G Y AI + L+ +P A + RG AR+ + ++A+SDF++AI+
Sbjct: 297 IMRAYAKNDLGDYQGAIDDQNNALEINPDNAVAYVNRGLARSNMGDPKSALSDFSKAIKI 356
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG ++ ALG+ A+ D +KA++ +P +A+ RG+ D+ A+
Sbjct: 357 DPANAMAFSNRGVSKQALGDPQGALDDYNKAIKIDPRNANAYANRGVNKGDLGDYQGAIA 416
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S + ++ ++ AY G+A +Y+ A + KAI++ + + Y +L
Sbjct: 417 DYSKAIGINPQHSDAYYNRGIAKLESKDYQGAIADYNKAIRIGTQNARIYLNRGLVYDNL 476
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ ++A+ + + +D +++ AY RGL G + AI D + + +DP
Sbjct: 477 GDYQRAIADYNKAIELDPQYALAYVNRGLAKIKSGDIQGAIADSNKAIELDP 528
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 111/223 (49%), Gaps = 1/223 (0%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+ + + + DQ LK A I R A+ + + AI D A++ NP A+
Sbjct: 273 KGREQTMVRLADQALKLRKT-GFAYIMRAYAKNDLGDYQGAIDDQNNALEINPDNAVAYV 331
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG AR+ +G+ A+ D SKA++ +P +A RG+ D A++D + +K+D
Sbjct: 332 NRGLARSNMGDPKSALSDFSKAIKIDPANAMAFSNRGVSKQALGDPQGALDDYNKAIKID 391
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
N +AY G+ +G+Y+ A + KAI ++ +A+ + + + + A+
Sbjct: 392 PRNANAYANRGVNKGDLGDYQGAIADYSKAIGINPQHSDAYYNRGIAKLESKDYQGAIAD 451
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ + I + ++ Y RGL+ LG +++AI D + + +DP
Sbjct: 452 YNKAIRIGTQNARIYLNRGLVYDNLGDYQRAIADYNKAIELDP 494
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%)
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
G A+ R A+ LG+ AI D + ALE P++A RG+ D +A+ D S
Sbjct: 293 GFAYIMRAYAKNDLGDYQGAIDDQNNALEINPDNAVAYVNRGLARSNMGDPKSALSDFSK 352
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+K+D N A++ G++ ++G+ + A + + KAI++D A+ + DL + +
Sbjct: 353 AIKIDPANAMAFSNRGVSKQALGDPQGALDDYNKAIKIDPRNANAYANRGVNKGDLGDYQ 412
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
A+ + + I+ + S AY+ RG+ ++ AI D + + I N R
Sbjct: 413 GAIADYSKAIGINPQHSDAYYNRGIAKLESKDYQGAIADYNKAIRIGTQNARIYLNRGLV 472
Query: 629 YHAIGEYREAV 639
Y +G+Y+ A+
Sbjct: 473 YDNLGDYQRAI 483
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 7/187 (3%)
Query: 376 SKSISVD------FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
SK+I +D F +RG+++ G A+ +++ +K DP A RG +
Sbjct: 351 SKAIKIDPANAMAFS-NRGVSKQALGDPQGALDDYNKAIKIDPRNANAYANRGVNKGDLG 409
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI+D+++AI NP +A+ RG A+ + AI D +KA+ +A I R
Sbjct: 410 DYQGAIADYSKAIGINPQHSDAYYNRGIAKLESKDYQGAIADYNKAIRIGTQNARIYLNR 469
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+V D+ A+ D + ++LD + AY GLA G+ + A KAI+LD
Sbjct: 470 GLVYDNLGDYQRAIADYNKAIELDPQYALAYVNRGLAKIKSGDIQGAIADSNKAIELDPR 529
Query: 550 FLEAWGH 556
+A+ +
Sbjct: 530 MAKAYAN 536
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D R +RG+ + + G Y AI+ + + + +P + +A RG A+ ++
Sbjct: 385 NKAIKIDPRNANAYANRGVNKGDLGDYQGAIADYSKAIGINPQHSDAYYNRGIAKLESKD 444
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+ +AI+ + RG LG+ AI D +KA+E +P A RG
Sbjct: 445 YQGAIADYNKAIRIGTQNARIYLNRGLVYDNLGDYQRAIADYNKAIELDPQYALAYVNRG 504
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K D A+ D + ++LD AY G A + + K KA L
Sbjct: 505 LAKIKSGDIQGAIADSNKAIELDPRMAKAYANRGAAKGMLDDAKGGCADFKKAASLGSQL 564
Query: 551 LEAW 554
W
Sbjct: 565 AAQW 568
>gi|390947945|ref|YP_006411705.1| hypothetical protein Alfi_2764 [Alistipes finegoldii DSM 17242]
gi|390424514|gb|AFL79020.1| tetratricopeptide repeat protein [Alistipes finegoldii DSM 17242]
Length = 662
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 111/252 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ N A + F ++ +P+Y +A R R+ + A+ DF EAI+ P
Sbjct: 66 RGIAKYNLDDLLGAEADFSTAIRMNPVYTQAYTYRAITRSRLGNYDDALQDFREAIELRP 125
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG R + EAI D K + E AD RG+ KD A ++
Sbjct: 126 DLPGPYYSRGVTRLLNQQFTEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTVRAYDNF 185
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ ++EN + Y G Y +AE KAI+ D +L ++ + Y +
Sbjct: 186 NTAIRTNRENPNGYNRRGGLYMEQKRYPEAEADFNKAIECDSTYLLSYFNRALVYSNTNR 245
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
AL +V+ +D S Y R +L +G + +A++D P+N+ Y RA
Sbjct: 246 PMLALSDFDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRA 305
Query: 627 SCYHAIGEYREA 638
Y +GE +A
Sbjct: 306 GVYAQLGEIEKA 317
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 93/222 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ ++ ++ AI FD+ ++++ +A I RG + ++ A +F AI++N
Sbjct: 133 SRGVTRLLNQQFTEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTVRAYDNFNTAIRTN 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RRG EA D +KA+E + R +V A+ D
Sbjct: 193 RENPNGYNRRGGLYMEQKRYPEAEADFNKAIECDSTYLLSYFNRALVYSNTNRPMLALSD 252
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD N Y + + IG+Y +A E + K N + + + Y L
Sbjct: 253 FDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRAGVYAQLG 312
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
EKA E + + F+ AY RG L L + A KD
Sbjct: 313 EIEKAAEDYTSAIKLYPDFANAYIYRGRLRELLRDPQGAKKD 354
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 31/159 (19%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
RG++Q +Y +A++ F ++ +P P + R T RA +QR
Sbjct: 487 FERGVSQALIKQYTNAVNTFSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRITI 546
Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ A++D +AI+ P ++ R RA G EA +D +
Sbjct: 547 DSDPANRLNNNSKRTYSYDEAVADLNKAIKLFPDLAYSYYNRANLRALSGSLPEAFEDYT 606
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
KA+E PN A+ + RGI+ KD D+S +L
Sbjct: 607 KAIELNPNFAEAYYNRGIIQIFMKDTRKGCLDISKAGEL 645
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
L RG ++A ++ A++ F+ AI+ NPS + R RA + + + +I + + +
Sbjct: 485 VLFERGVSQALIKQYTNAVNTFSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRI 544
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-LSSI-GEYK 534
+ + A+ L+ + + + AV DL+ +KL + AY+Y A L ++ G
Sbjct: 545 TIDSDPANRLNNNSKRTYSYDE---AVADLNKAIKLFPD--LAYSYYNRANLRALSGSLP 599
Query: 535 KAEEAHLKAIQLDRNFLEAW---GHLTQFYQD 563
+A E + KAI+L+ NF EA+ G + F +D
Sbjct: 600 EAFEDYTKAIELNPNFAEAYYNRGIIQIFMKD 631
>gi|126655454|ref|ZP_01726893.1| TPR repeat [Cyanothece sp. CCY0110]
gi|126622933|gb|EAZ93638.1| TPR repeat [Cyanothece sp. CCY0110]
Length = 391
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 94/172 (54%), Gaps = 2/172 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + +GK AI+ + + ++ P +P+A RG A Q++ E AI+DFT+AI+ N
Sbjct: 171 NRAMIYEGQGKLDLAITDYTKAIQYQPEFPQAYHNRGIAYKMQQKPELAIADFTKAIEVN 230
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG + LG+ A+ D K ++ EPN + + RG + + K +N A+ D
Sbjct: 231 PNYASAYGNRGLTYSELGKWNLALADYGKTIQLEPNDPIVYYNRGNLYAQQKKWNLALSD 290
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
++L+ + +SAY GL S ++ A + KAI+L+ NF AW +
Sbjct: 291 FDKAIQLNPDYESAYYNRGLVYSRQQKHDLAIADYTKAIELNSNF--AWAYF 340
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 13/289 (4%)
Query: 351 KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE 410
KWD+ + N+A I+ ++ + +RG+ N+GK A++ + + ++
Sbjct: 79 KWDLAISSYNQA----------ITLEPTLLEAYN-NRGVVYQNQGKLDLAVADYTKAIEL 127
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
P Y A R Q++L A++D+ + I P A+ R G+ AI
Sbjct: 128 SPNYASAYQNRAIVYHKQQQLPLALADYNKLIDLAPDNAIAYNNRAMIYEGQGKLDLAIT 187
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D +KA++++P H RGI + A+ D + ++++ SAY GL S +
Sbjct: 188 DYTKAIQYQPEFPQAYHNRGIAYKMQQKPELAIADFTKAIEVNPNYASAYGNRGLTYSEL 247
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G++ A + K IQL+ N + + Y AL + + ++ + AY+
Sbjct: 248 GKWNLALADYGKTIQLEPNDPIVYYNRGNLYAQQKKWNLALSDFDKAIQLNPDYESAYYN 307
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREA 638
RGL+ +H AI D + + ++ SN Y R + Y E++ A
Sbjct: 308 RGLVYSRQQKHDLAIADYTKAIELN-SNFAWAYFNRGTGYMFKREFKTA 355
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 83/212 (39%), Gaps = 34/212 (16%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q + + AIS + +AI P+ EA+ RG G+ A+ D +KA+E PN A
Sbjct: 77 QEKWDLAISSYNQAITLEPTLLEAYNNRGVVYQNQGKLDLAVADYTKAIELSPNYASAYQ 136
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
R IV K + A+ D + + L +N AY + G+ A + KAIQ
Sbjct: 137 NRAIVYHKQQQLPLALADYNKLIDLAPDNAIAYNNRAMIYEGQGKLDLAITDYTKAIQ-- 194
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
YQ F +AYH RG+ + + AI D
Sbjct: 195 -------------YQ-------------------PEFPQAYHNRGIAYKMQQKPELAIAD 222
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + ++P+ R Y +G++ A+
Sbjct: 223 FTKAIEVNPNYASAYGNRGLTYSELGKWNLAL 254
>gi|427729657|ref|YP_007075894.1| hypothetical protein Nos7524_2456 [Nostoc sp. PCC 7524]
gi|427365576|gb|AFY48297.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
Length = 276
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 99/182 (54%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + AI+ F++ ++ +P + RG ARA +L AI+DF +A+Q N + +A+K
Sbjct: 63 GDLSGAIADFNKAVQMNPNDADTYNNRGKARALSGDLPGAIADFNQALQINSNDADAYKN 122
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+AR G+ AI D ++AL+ PN AD + RG+ D ++ED + ++++
Sbjct: 123 RGKARVLSGDLPGAIADFNQALQINPNDADTYYSRGVARDNSGDLKGSIEDFNQALRINP 182
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AY G+ + G+ K A E +A++++ N +++ + Y L + +KA+ L
Sbjct: 183 NYVDAYNNRGVNRALEGDLKSAIEDFNQALEINPNNADSYKNRGIAYSQLGDVKKAIADL 242
Query: 575 QQ 576
Q+
Sbjct: 243 QK 244
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G AI+ F+Q L+ + +A RG AR +L AI+DF +A+Q N
Sbjct: 88 NRGKARALSGDLPGAIADFNQALQINSNDADAYKNRGKARVLSGDLPGAIADFNQALQIN 147
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + + RG AR G+ +I+D ++AL PN D + RG+ D +A+ED
Sbjct: 148 PNDADTYYSRGVARDNSGDLKGSIEDFNQALRINPNYVDAYNNRGVNRALEGDLKSAIED 207
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ ++++ N +Y G+A S +G+ KKA KA +L
Sbjct: 208 FNQALEINPNNADSYKNRGIAYSQLGDVKKAIADLQKAAEL 248
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 34/219 (15%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R A +L AI+DF +A+Q NP+ + + RG+ARA G+ AI D ++AL+
Sbjct: 55 RAMDSALSGDLSGAIADFNKAVQMNPNDADTYNNRGKARALSGDLPGAIADFNQALQINS 114
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N AD RG D A+ D + ++++ + Y G+A + G+ K +
Sbjct: 115 NDADAYKNRGKARVLSGDLPGAIADFNQALQINPNDADTYYSRGVARDNSGDLKGS---- 170
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+E Q L I+ + AY+ RG+ G
Sbjct: 171 ------------------------------IEDFNQALRINPNYVDAYNNRGVNRALEGD 200
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
K AI+D + L I+P+N + R Y +G+ ++A+
Sbjct: 201 LKSAIEDFNQALEINPNNADSYKNRGIAYSQLGDVKKAI 239
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D SRG+A+ N G +I F+Q L+ +P Y +A RG RA + +L++AI DF +A
Sbjct: 152 DTYYSRGVARDNSGDLKGSIEDFNQALRINPNYVDAYNNRGVNRALEGDLKSAIEDFNQA 211
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
++ NP+ +++K RG A + LG+ +AI DL KA E
Sbjct: 212 LEINPNNADSYKNRGIAYSQLGDVKKAIADLQKAAEL 248
>gi|427716370|ref|YP_007064364.1| hypothetical protein Cal7507_1054 [Calothrix sp. PCC 7507]
gi|427348806|gb|AFY31530.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 517
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 4/227 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG+A+ YA AI+ ++Q +K +P +A RG + + EAAI D+ +A
Sbjct: 258 DIYYKRGLARHEISDYAGAIADYNQAIKINPNNAKAYNKRGLSHYQLGDYEAAIDDYNQA 317
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP +K R AR+ LG++ AI+D ++A++ PN A + I + +
Sbjct: 318 IRINPHVAVNFKNRADARSQLGDNQGAIEDYTQAIKINPNYAIVDTNGSISRYLLTN--- 374
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
+ + +KL+ + AY A +G+Y+ A +++ I+++ N+++A+ +
Sbjct: 375 -QQKFTKAIKLNPHDAVAYKNRADARYDLGDYEGAIADYIQVIKINPNYIDAYYNCGNAR 433
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
DL + E A+ QV+ I+ + AY+ RG +G + +++D
Sbjct: 434 YDLGDYEGAIASYTQVIKINANYIDAYYNRGNARFAMGNKQGSLEDF 480
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 117/212 (55%), Gaps = 8/212 (3%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ +AA++++ +A++ +P + + +RG AR + + AI D ++A++ PN+A ++R
Sbjct: 238 DFDAALTNYNKALKLHPDDADIYYKRGLARHEISDYAGAIADYNQAIKINPNNAKAYNKR 297
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ +++ D+ AA++D + ++++ + A S +G+ + A E + +AI+++ N
Sbjct: 298 GLSHYQLGDYEAAIDDYNQAIRINPHVAVNFKNRADARSQLGDNQGAIEDYTQAIKINPN 357
Query: 550 F--LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ ++ G ++++ L N +K + ++ ++ + AY R + LG ++ AI D
Sbjct: 358 YAIVDTNGSISRYL--LTNQQKFTKAIK----LNPHDAVAYKNRADARYDLGDYEGAIAD 411
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ I+P+ I+ Y + + +G+Y A+
Sbjct: 412 YIQVIKINPNYIDAYYNCGNARYDLGDYEGAI 443
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 5/171 (2%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I + ++V+F+ +R A+ G AI + Q +K +P Y A++ T + R L
Sbjct: 318 IRINPHVAVNFK-NRADARSQLGDNQGAIEDYTQAIKINPNY--AIVD--TNGSISRYLL 372
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
FT+AI+ NP A+K R AR LG+ AI D + ++ PN D + G
Sbjct: 373 TNQQKFTKAIKLNPHDAVAYKNRADARYDLGDYEGAIADYIQVIKINPNYIDAYYNCGNA 432
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ D+ A+ + +K++ AY G A ++G + + E KA
Sbjct: 433 RYDLGDYEGAIASYTQVIKINANYIDAYYNRGNARFAMGNKQGSLEDFQKA 483
>gi|354604210|ref|ZP_09022201.1| hypothetical protein HMPREF9450_01116 [Alistipes indistinctus YIT
12060]
gi|353347977|gb|EHB92251.1| hypothetical protein HMPREF9450_01116 [Alistipes indistinctus YIT
12060]
Length = 673
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 34/286 (11%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G + + + K+ AI + +LK D E RG A+ +L A DF+ AI++NP
Sbjct: 44 GRSYIIDNKFRDAIETLNVLLKVDEKAYEGYFLRGIAKYNLDDLLGAEQDFSYAIENNPV 103
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A++ R R+ LG +A++D A++ P+ D RG+ + F AVED +
Sbjct: 104 FTAAYQYRAITRSRLGNYDDALKDFQVAIDLRPDRPDPYFSRGVTFLLSQQFEKAVEDFT 163
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY------ 561
++ D + AY G + + + +A E + AI+ +R A+ Y
Sbjct: 164 TFIRFDNKVVDAYVNRGTSYLMMKDTTRAYEDYNTAIRTNRESPLAYSRRGMLYMAQKKY 223
Query: 562 -QDLANSEKALEC---------------------------LQQVLYIDKRFSKAYHLRGL 593
+ LA+ +K++EC +VL +D S Y R +
Sbjct: 224 DEALADFDKSIECDSTYIPSYFNRALVYSTINRPVQAIEDFSRVLALDSTSSLTYFNRAI 283
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + +G + A+ D P+N+ Y RA+ Y +G+Y A+
Sbjct: 284 LRNQIGDYNNALADYDKVAFYSPNNVLLYYNRAALYRQLGDYYAAI 329
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 7/231 (3%)
Query: 375 KSKSISVDFR-------LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
K +++D R SRG+ + ++ A+ F ++ D +A + RGT+
Sbjct: 126 KDFQVAIDLRPDRPDPYFSRGVTFLLSQQFEKAVEDFTTFIRFDNKVVDAYVNRGTSYLM 185
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ A D+ AI++N + A+ RRG A + EA+ D K++E +
Sbjct: 186 MKDTTRAYEDYNTAIRTNRESPLAYSRRGMLYMAQKKYDEALADFDKSIECDSTYIPSYF 245
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
R +V A+ED S + LD + Y + + IG+Y A + K
Sbjct: 246 NRALVYSTINRPVQAIEDFSRVLALDSTSSLTYFNRAILRNQIGDYNNALADYDKVAFYS 305
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
N + + + Y+ L + A+ + + + F+ AY R L + L
Sbjct: 306 PNNVLLYYNRAALYRQLGDYYAAINDYTRAIELYPDFANAYLGRSALRYML 356
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+ L RG ++ R+ +IS++T AI +PS + R ++ + + + +I + +
Sbjct: 493 QLLFKRGITQSLIRQYTGSISNYTAAIDLDPSNPFLYINRSTTQSEMVDFISSIDNGYQR 552
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA--LSSIGEY 533
+ + + A L ++ + D A+ DL+ +L E AY Y A L G
Sbjct: 553 ITVDNDPASQLKSNSSRSYNYDD---AIADLNKAARLFPE--FAYIYYNRANLLCRSGRI 607
Query: 534 KKAEEAHLKAIQLDRNFLEAW 554
+A E + KAI+L+ +F EA+
Sbjct: 608 PEALEDYTKAIELNPSFAEAY 628
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 31/159 (19%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
RGI Q +Y +IS + + DP P I R T ++ +QR
Sbjct: 496 FKRGITQSLIRQYTGSISNYTAAIDLDPSNPFLYINRSTTQSEMVDFISSIDNGYQRITV 555
Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ AI+D +A + P + R G EA++D +
Sbjct: 556 DNDPASQLKSNSSRSYNYDDAIADLNKAARLFPEFAYIYYNRANLLCRSGRIPEALEDYT 615
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
KA+E P+ A+ + RG+V KD D+S +L
Sbjct: 616 KAIELNPSFAEAYYNRGLVQIFLKDTRKGCLDMSKAGEL 654
>gi|254412859|ref|ZP_05026632.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180594|gb|EDX75585.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 435
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 118/247 (47%), Gaps = 28/247 (11%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG +A Q +LE AI +F +A++ NP EA+ RRG AR LG+ AI D S+AL P
Sbjct: 8 RGREKAQQGDLEGAIQEFEQALRINPEFAEAYYRRGLARFDLGDCQSAIADYSQALRVNP 67
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA---- 536
D R + + A++ED +++D ++AY G A +G+ K+A
Sbjct: 68 EHLDSYLGRSLAYLAQGEAQASLEDAQQVLQIDGNREAAYKLQGTAYRRLGKTKEAIASF 127
Query: 537 -EEAHLKAIQLDRN---------------------FLEAWGHLTQFYQDLANSE--KALE 572
+ A L Q D++ E +LTQ L + +ALE
Sbjct: 128 KQAAKLYLDQKDKDNCQSCLESIKQIQSAQIQAASAAETQKYLTQVINKLQQGKHREALE 187
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
Q +L++ ++AY RG++ LG + A++DL + +DP++I+ + R +
Sbjct: 188 DCQWLLHVAPNDARAYCYRGIIRSKLGNLRGAMEDLGRAMQLDPNDIQVRHYRGRVRIEL 247
Query: 633 GEYREAV 639
G+YR A+
Sbjct: 248 GDYRGAI 254
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 28/281 (9%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ + G SAI+ + Q L+ +P + ++ +GR A Q E +A++ D + +Q +
Sbjct: 42 RGLARFDLGDCQSAIADYSQALRVNPEHLDSYLGRSLAYLAQGEAQASLEDAQQVLQIDG 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD---------------------- 484
+ A+K +G A LG++ EAI +A + + D
Sbjct: 102 NREAAYKLQGTAYRRLGKTKEAIASFKQAAKLYLDQKDKDNCQSCLESIKQIQSAQIQAA 161
Query: 485 -----ILHERGIVN-FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+ ++N + A+ED + + + AY Y G+ S +G + A E
Sbjct: 162 SAAETQKYLTQVINKLQQGKHREALEDCQWLLHVAPNDARAYCYRGIIRSKLGNLRGAME 221
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+A+QLD N ++ + + +L + A+ Q+L + S+ Y RG L
Sbjct: 222 DLGRAMQLDPNDIQVRHYRGRVRIELGDYRGAIADFTQLLELQPDNSQYYVCRGQAYSKL 281
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G +++ I+D S GL I P++ + Y RA+ +Y+ A
Sbjct: 282 GDYRQGIEDYSRGLTIQPNDPQIYYHRAAARADFQDYQGAA 322
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ D + P+ A+ RG R+ LG A++DL +A++ +PN + H RG V
Sbjct: 185 ALEDCQWLLHVAPNDARAYCYRGIIRSKLGNLRGAMEDLGRAMQLDPNDIQVRHYRGRVR 244
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ D+ A+ D + ++L +N Y G A S +G+Y++ E + + + + N +
Sbjct: 245 IELGDYRGAIADFTQLLELQPDNSQYYVCRGQAYSKLGDYRQGIEDYSRGLTIQPNDPQI 304
Query: 554 WGHLTQFYQDLANSEKALECLQQV--LYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ H D + + A + QQ LY +K+ + YH L Q K+ I
Sbjct: 305 YYHRAAARADFQDYQGAADDYQQAANLYFEKQDWQKYH------QALNQQKQQI 352
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI + G A+ + ++ DP + RG R + AI+DFT+ ++ P
Sbjct: 206 RGIIRSKLGNLRGAMEDLGRAMQLDPNDIQVRHYRGRVRIELGDYRGAIADFTQLLELQP 265
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + RGQA + LG+ + I+D S+ L +PN I + R F+D+ A +D
Sbjct: 266 DNSQYYVCRGQAYSKLGDYRQGIEDYSRGLTIQPNDPQIYYHRAAARADFQDYQGAADDY 325
Query: 507 SACVKLDKENKSAYTY 522
L E + Y
Sbjct: 326 QQAANLYFEKQDWQKY 341
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++ I ++ +GK+ A+ +L P A RG R+ L A+ D A+Q
Sbjct: 170 LTQVINKLQQGKHREALEDCQWLLHVAPNDARAYCYRGIIRSKLGNLRGAMEDLGRAMQL 229
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ + RG+ R LG+ AI D ++ LE +P+++ RG K D+ +E
Sbjct: 230 DPNDIQVRHYRGRVRIELGDYRGAIADFTQLLELQPDNSQYYVCRGQAYSKLGDYRQGIE 289
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
D S + + + Y + A + +Y+ A + + +A L
Sbjct: 290 DYSRGLTIQPNDPQIYYHRAAARADFQDYQGAADDYQQAANL 331
>gi|17229169|ref|NP_485717.1| hypothetical protein alr1677 [Nostoc sp. PCC 7120]
gi|17135497|dbj|BAB78043.1| alr1677 [Nostoc sp. PCC 7120]
Length = 280
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 118/227 (51%), Gaps = 9/227 (3%)
Query: 365 NKKFCVTRI--------SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
NK+ VT I + + S + F + +G Q +G +AI+ +D+ + DP Y
Sbjct: 36 NKEVLVTEIGVNPPSRRTTNNSQAGQFYV-QGQRQHAQGDSQAAIASYDKAIGLDPDYSA 94
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A GRG A + + AI+D+ EAI+ +P+ EA+ RG ARA+LG++ AI D ++A+
Sbjct: 95 AYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAI 154
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
PN A+ + RG D A+ED + ++L+ + AY G A +S G+ + A
Sbjct: 155 RLSPNYAEAYNNRGNARSVQGDKQGALEDFNQAIRLNPKYAIAYNNRGNARASQGDRQGA 214
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
+ +AI+L+ NF A+ + + + ALE LQ+ I +R
Sbjct: 215 ISDYNQAIRLNSNFGPAYNNRGNARAAQGDRQGALEDLQKAADIFQR 261
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q + +AAI+ + +AI +P A++ RG A LG+ +AI D ++A+ PN A+ +
Sbjct: 72 QGDSQAAIASYDKAIGLDPDYSAAYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFN 131
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG D A+ D + ++L AY G A S G+ + A E +AI+L+
Sbjct: 132 SRGNARASLGDNAGAITDYNEAIRLSPNYAEAYNNRGNARSVQGDKQGALEDFNQAIRLN 191
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ + + + A+ Q + ++ F AY+ RG G + A++D
Sbjct: 192 PKYAIAYNNRGNARASQGDRQGAISDYNQAIRLNSNFGPAYNNRGNARAAQGDRQGALED 251
Query: 608 L 608
L
Sbjct: 252 L 252
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E ++ + +N AG+ + + GQ + A G+S AI KA+ +P+ + RG+
Sbjct: 43 EIGVNPPSRRTTNNSQAGQFYVQ-GQRQHAQGDSQAAIASYDKAIGLDPDYSAAYRGRGL 101
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F D A+ D + ++L + A+ G A +S+G+ A + +AI+L N+
Sbjct: 102 AYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNYA 161
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + + + ALE Q + ++ +++ AY+ RG G + AI D +
Sbjct: 162 EAYNNRGNARSVQGDKQGALEDFNQAIRLNPKYAIAYNNRGNARASQGDRQGAISDYNQA 221
Query: 612 LGIDPSNIECLY 623
+ ++ SN Y
Sbjct: 222 IRLN-SNFGPAY 232
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+S+ A+ + + +D +S AY RGL LG +KAI D + + + P++ E
Sbjct: 73 GDSQAAIASYDKAIGLDPDYSAAYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFNS 132
Query: 625 RASCYHAIG-------EYREAV 639
R + ++G +Y EA+
Sbjct: 133 RGNARASLGDNAGAITDYNEAI 154
>gi|397690319|ref|YP_006527573.1| TPR repeat-containing protein [Melioribacter roseus P3M]
gi|395811811|gb|AFN74560.1| TPR repeat-containing protein [Melioribacter roseus P3M]
Length = 470
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 125/259 (48%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD ++ IA+ N G + A+ ++ L +P E L G + + A+ F
Sbjct: 106 VDTHINIAIAEDNLGMFEEAVESLEKALAIEPHNEEILYNLGALYEKKEKYNEAVEYFRM 165
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A++ P EAW G ++GE +A+ L +P + + +GIV+ + ++F
Sbjct: 166 AVEKAPDYLEAWYELGYCYESMGELKDALAAYEMYLNGDPENYAGWYNKGIVHLRLEEFE 225
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ + L + S++ G A G+YK+A A+ KA+++D + + +L Q
Sbjct: 226 KAINAFELSIALKDDFSSSWFNCGYAYYKTGKYKQAMTAYKKALKIDPDDETIYYNLGQT 285
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
Y+++ + A++C + + +D + +AY RG G+ + A++D + + I ++
Sbjct: 286 YEEMGSIANAIKCYTEAINLDPDYYEAYLARGNCYDASGKFQLALRDFNKAITIASEPVD 345
Query: 621 CLYLRASCYHAIGEYREAV 639
Y +A +++G+ E++
Sbjct: 346 AWYAKADLEYSLGKLNESI 364
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 93/194 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A GKY A++ + + LK DP G + AI +TEAI +P
Sbjct: 249 GYAYYKTGKYKQAMTAYKKALKIDPDDETIYYNLGQTYEEMGSIANAIKCYTEAINLDPD 308
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+ RG A G+ A++D +KA+ D + + + + N ++E
Sbjct: 309 YYEAYLARGNCYDASGKFQLALRDFNKAITIASEPVDAWYAKADLEYSLGKLNESIESYK 368
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
V++D +N + + L A +G + ++ +A+ + I++D+N+ A+ + + L+++
Sbjct: 369 NAVEIDPDNFNGWLKLAEAFFEVGNWLESLKAYKECIRIDKNYARAYYSIAKINFLLSHT 428
Query: 568 EKALECLQQVLYID 581
++ +E L++ +D
Sbjct: 429 QEGIEYLKKAFELD 442
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F +A+ NP+ + A LG EA++ L KAL EP++ +IL+ G + K +
Sbjct: 95 FRKALSLNPNDVDTHINIAIAEDNLGMFEEAVESLEKALAIEPHNEEILYNLGALYEKKE 154
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+N AVE V+ + A+ LG S+GE K A A+ + D W +
Sbjct: 155 KYNEAVEYFRMAVEKAPDYLEAWYELGYCYESMGELKDALAAYEMYLNGDPENYAGWYNK 214
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ L EKA+ + + + FS ++ G + G++K+A+ L IDP
Sbjct: 215 GIVHLRLEEFEKAINAFELSIALKDDFSSSWFNCGYAYYKTGKYKQAMTAYKKALKIDPD 274
Query: 618 NIECLYLRASCYHAIGEYREAV 639
+ Y Y +G A+
Sbjct: 275 DETIYYNLGQTYEEMGSIANAI 296
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 8/202 (3%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+Q P E W +G + EA KAL PN D I F
Sbjct: 65 LQITPYNYEIWHFKGIFLNNMFRFAEAYNCFRKALSLNPNDVDTHINIAIAEDNLGMFEE 124
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
AVE L + ++ N+ LG +Y +A E A++ ++LEAW L Y
Sbjct: 125 AVESLEKALAIEPHNEEILYNLGALYEKKEKYNEAVEYFRMAVEKAPDYLEAWYELGYCY 184
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK--DLSSGLGIDPSN- 618
+ + + AL + L D ++ +G++ L + +KAI +LS L D S+
Sbjct: 185 ESMGELKDALAAYEMYLNGDPENYAGWYNKGIVHLRLEEFEKAINAFELSIALKDDFSSS 244
Query: 619 -IECLYLRASCYHAIGEYREAV 639
C Y Y+ G+Y++A+
Sbjct: 245 WFNCGY----AYYKTGKYKQAM 262
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 103/257 (40%), Gaps = 34/257 (13%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ A++ ++ L DP +G E E AI+ F +I +W
Sbjct: 188 GELKDALAAYEMYLNGDPENYAGWYNKGIVHLRLEEFEKAINAFELSIALKDDFSSSWFN 247
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G A G+ +A+ KAL+ +P+ I + G + A++ + + LD
Sbjct: 248 CGYAYYKTGKYKQAMTAYKKALKIDPDDETIYYNLGQTYEEMGSIANAIKCYTEAINLDP 307
Query: 515 ENKSAYTYLG----------LAL------------------------SSIGEYKKAEEAH 540
+ AY G LAL S+G+ ++ E++
Sbjct: 308 DYYEAYLARGNCYDASGKFQLALRDFNKAITIASEPVDAWYAKADLEYSLGKLNESIESY 367
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
A+++D + W L + + ++ N ++L+ ++ + IDK +++AY+ + L
Sbjct: 368 KNAVEIDPDNFNGWLKLAEAFFEVGNWLESLKAYKECIRIDKNYARAYYSIAKINFLLSH 427
Query: 601 HKKAIKDLSSGLGIDPS 617
++ I+ L +DP+
Sbjct: 428 TQEGIEYLKKAFELDPN 444
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 34/161 (21%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G A+AI + + + DP Y EA + RG + + A+ DF +AI +AW
Sbjct: 290 GSIANAIKCYTEAINLDPDYYEAYLARGNCYDASGKFQLALRDFNKAITIASEPVDAWYA 349
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNS-------ADILHERG----------------- 490
+ +LG+ E+I+ A+E +P++ A+ E G
Sbjct: 350 KADLEYSLGKLNESIESYKNAVEIDPDNFNGWLKLAEAFFEVGNWLESLKAYKECIRIDK 409
Query: 491 ----------IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
+NF +E L +LD K+ +T
Sbjct: 410 NYARAYYSIAKINFLLSHTQEGIEYLKKAFELDPNIKTEFT 450
>gi|428214976|ref|YP_007088120.1| hypothetical protein Oscil6304_4688 [Oscillatoria acuminata PCC
6304]
gi|428003357|gb|AFY84200.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
Length = 291
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ ++ + V+F +G++ G Y AI+ +D+ L+ DP E RG A
Sbjct: 5 ITCARGLEVEFFFRKGLSLSEAGNYTGAIASYDKALELDPNADEIWYCRGNALYNLGRTN 64
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI + A++ NP +A RG A G EA++ + L +P+ + RGI
Sbjct: 65 PAIKSYDMALELNPGCYQALINRGNALDDSGRHQEAVESYDRVLRLKPDHHRTWNNRGIA 124
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++ A+ ++ + A+ + GLAL S+G +K + KA+ +F E
Sbjct: 125 LGNLGKYDEAIASYDRAIEFKPDYSRAWYHRGLALKSMGLTEKTLACYDKALASQPDFYE 184
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
W + L +A+ + + + A++ RG++L L ++++AI L +
Sbjct: 185 VWNNRGNTLYLLKRYSEAISSYDKAVQSFPNYHWAWYNRGVVLQELNRNEEAIVSLDKAV 244
Query: 613 GIDPSNIECLYLRASCYHAI 632
++P N E Y RA A+
Sbjct: 245 TLNPKNAEAWYYRALALEAL 264
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 77/165 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N GKY AI+ +D+ ++ P Y A RG A E ++ + +A+ S
Sbjct: 120 NRGIALGNLGKYDEAIASYDRAIEFKPDYSRAWYHRGLALKSMGLTEKTLACYDKALASQ 179
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W RG L EAI KA++ PN + RG+V + A+
Sbjct: 180 PDFYEVWNNRGNTLYLLKRYSEAISSYDKAVQSFPNYHWAWYNRGVVLQELNRNEEAIVS 239
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
L V L+ +N A+ Y LAL ++ + A ++ KA +L N
Sbjct: 240 LDKAVTLNPKNAEAWYYRALALEALDCTRSAAASYDKAYELKPNL 284
>gi|434406141|ref|YP_007149026.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428260396|gb|AFZ26346.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 792
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G+Y AI+ +D LK P P A RG A E AI+ + A++
Sbjct: 399 NRGIALGKLGRYEDAIACYDAALKIQPDDPGAWNNRGIALGKLGRNEDAIASYDAALKIQ 458
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG + +AI AL+ +P+ +D + RG K A+
Sbjct: 459 PDLHQAWYNRGIALRKLGRNEDAIASYDAALKIQPDDSDAWYNRGNDLGKLGRNEDAIAS 518
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A +K+ + A+ G AL ++G + A ++ A++ + EAW + +L
Sbjct: 519 YDAALKIQPDLHQAWYNRGNALGNLGRDEDAIASYDAALKFQPDLHEAWYNRGNALGNLG 578
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+E A+ L + +A++ RG+ L LG+ + I + L P E Y R
Sbjct: 579 RNEDAIASYDAALKFQPDYHQAWYNRGIALRKLGRDEDVIASYDAALKFQPDYHEAWYNR 638
Query: 626 ASCYHAIGEYREAV 639
+ +G Y +A+
Sbjct: 639 GNALDELGCYEDAI 652
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G Y AI+ +D LK P Y +A RG E AI+ + A++
Sbjct: 297 NRGNALDELGCYEDAIASYDAALKIQPDYHQAWYNRGNDLGNLGRYEDAIACYDAALKIQ 356
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG + I +AL+ +P+ D + RGI K + A+
Sbjct: 357 PDKHQAWNNRGNALGNLGRYEDEIASYDQALKIQPDDPDAWNNRGIALGKLGRYEDAIAC 416
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A +K+ ++ A+ G+AL +G + A ++ A+++ + +AW + + L
Sbjct: 417 YDAALKIQPDDPGAWNNRGIALGKLGRNEDAIASYDAALKIQPDLHQAWYNRGIALRKLG 476
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+E A+ L I S A++ RG L LG+++ AI + L I P + Y R
Sbjct: 477 RNEDAIASYDAALKIQPDDSDAWYNRGNDLGKLGRNEDAIASYDAALKIQPDLHQAWYNR 536
Query: 626 ASCYHAIGEYREAV 639
+ +G +A+
Sbjct: 537 GNALGNLGRDEDAI 550
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ AI+ +DQ LK P Y +A RG A E AI+ + A++
Sbjct: 263 NRGIALGNLGRNEDAIASYDQALKIQPDYHQAWYNRGNALDELGCYEDAIASYDAALKIQ 322
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG LG +AI AL+ +P+ + RG + +
Sbjct: 323 PDYHQAWYNRGNDLGNLGRYEDAIACYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIAS 382
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ ++ A+ G+AL +G Y+ A + A+++ + AW + L
Sbjct: 383 YDQALKIQPDDPDAWNNRGIALGKLGRYEDAIACYDAALKIQPDDPGAWNNRGIALGKLG 442
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+E A+ L I +A++ RG+ L LG+++ AI + L I P + + Y R
Sbjct: 443 RNEDAIASYDAALKIQPDLHQAWYNRGIALRKLGRNEDAIASYDAALKIQPDDSDAWYNR 502
Query: 626 ASCYHAIGEYREAV 639
+ +G +A+
Sbjct: 503 GNDLGKLGRNEDAI 516
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ AI+ +D LK P +A RG A E AI+ + A++ P EAW
Sbjct: 510 GRNEDAIASYDAALKIQPDLHQAWYNRGNALGNLGRDEDAIASYDAALKFQPDLHEAWYN 569
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LG + +AI AL+F+P+ + RGI K + A +K
Sbjct: 570 RGNALGNLGRNEDAIASYDAALKFQPDYHQAWYNRGIALRKLGRDEDVIASYDAALKFQP 629
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G AL +G Y+ A ++ A++ + +AW + +L E A+
Sbjct: 630 DYHEAWYNRGNALDELGCYEDAIASYDAALKFQPDLHQAWYNRGIALGNLGRYEDAIASY 689
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
L + +A++ RG+ L LG+++ AI + P + C + +CY+A+
Sbjct: 690 DAALKFQPDYHEAWNNRGIALGNLGRYEDAIASFEEAIKFQPDD-HCAWYNKACYYAL 746
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N G+Y I+ +DQ LK P P+A RG A E AI+ + A++
Sbjct: 365 NRGNALGNLGRYEDEIASYDQALKIQPDDPDAWNNRGIALGKLGRYEDAIACYDAALKIQ 424
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW RG A LG + +AI AL+ +P+ + RGI K A+
Sbjct: 425 PDDPGAWNNRGIALGKLGRNEDAIASYDAALKIQPDLHQAWYNRGIALRKLGRNEDAIAS 484
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A +K+ ++ A+ G L +G + A ++ A+++ + +AW + +L
Sbjct: 485 YDAALKIQPDDSDAWYNRGNDLGKLGRNEDAIASYDAALKIQPDLHQAWYNRGNALGNLG 544
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E A+ L +A++ RG L LG+++ AI + L P + Y R
Sbjct: 545 RDEDAIASYDAALKFQPDLHEAWYNRGNALGNLGRNEDAIASYDAALKFQPDYHQAWYNR 604
Query: 626 ASCYHAIG 633
+G
Sbjct: 605 GIALRKLG 612
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RG A N G+ AI+ +D LK P Y +A RG A R R+ E I+ + A++
Sbjct: 569 NRGNALGNLGRNEDAIASYDAALKFQPDYHQAWYNRGIALRKLGRD-EDVIASYDAALKF 627
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW RG A LG +AI AL+F+P+ + RGI + A+
Sbjct: 628 QPDYHEAWYNRGNALDELGCYEDAIASYDAALKFQPDLHQAWYNRGIALGNLGRYEDAIA 687
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
A +K + A+ G+AL ++G Y+ A + +AI+ + AW + +Y
Sbjct: 688 SYDAALKFQPDYHEAWNNRGIALGNLGRYEDAIASFEEAIKFQPDDHCAWYNKACYYALQ 747
Query: 565 ANSEKALECLQQVL 578
N E+ALE LQQ +
Sbjct: 748 GNIEQALENLQQAI 761
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G+ AI+ +D LK P +A RG E AI+ + A++
Sbjct: 467 NRGIALRKLGRNEDAIASYDAALKIQPDDSDAWYNRGNDLGKLGRNEDAIASYDAALKIQ 526
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG +AI AL+F+P+ + + RG A+
Sbjct: 527 PDLHQAWYNRGNALGNLGRDEDAIASYDAALKFQPDLHEAWYNRGNALGNLGRNEDAIAS 586
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A +K + A+ G+AL +G + ++ A++ ++ EAW + +L
Sbjct: 587 YDAALKFQPDYHQAWYNRGIALRKLGRDEDVIASYDAALKFQPDYHEAWYNRGNALDELG 646
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E A+ L +A++ RG+ L LG+++ AI + L P E R
Sbjct: 647 CYEDAIASYDAALKFQPDLHQAWYNRGIALGNLGRYEDAIASYDAALKFQPDYHEAWNNR 706
Query: 626 ASCYHAIGEYREAV 639
+G Y +A+
Sbjct: 707 GIALGNLGRYEDAI 720
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N G+Y AI+ +D LK P +A RG A E I+ + +A++
Sbjct: 331 NRGNDLGNLGRYEDAIACYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIASYDQALKIQ 390
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG +AI AL+ +P+ + RGI K A+
Sbjct: 391 PDDPDAWNNRGIALGKLGRYEDAIACYDAALKIQPDDPGAWNNRGIALGKLGRNEDAIAS 450
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A +K+ + A+ G+AL +G + A ++ A+++ + +AW + L
Sbjct: 451 YDAALKIQPDLHQAWYNRGIALRKLGRNEDAIASYDAALKIQPDDSDAWYNRGNDLGKLG 510
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+E A+ L I +A++ RG L LG+ + AI + L P E Y R
Sbjct: 511 RNEDAIASYDAALKIQPDLHQAWYNRGNALGNLGRDEDAIASYDAALKFQPDLHEAWYNR 570
Query: 626 ASCYHAIGEYREAV 639
+ +G +A+
Sbjct: 571 GNALGNLGRNEDAI 584
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG A +E E AI+ + A++ P +AW RG A LG + +AI +AL+
Sbjct: 227 LFERGNLLAAAKEYEEAIASYDAALKIQPDKHQAWNNRGIALGNLGRNEDAIASYDQALK 286
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P+ + RG + + A+ A +K+ + A+ G L ++G Y+ A
Sbjct: 287 IQPDYHQAWYNRGNALDELGCYEDAIASYDAALKIQPDYHQAWYNRGNDLGNLGRYEDAI 346
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ A+++ + +AW + +L E + Q L I A++ RG+ L
Sbjct: 347 ACYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIASYDQALKIQPDDPDAWNNRGIALGK 406
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG+++ AI + L I P + R +G +A+
Sbjct: 407 LGRYEDAIACYDAALKIQPDDPGAWNNRGIALGKLGRNEDAI 448
>gi|113475981|ref|YP_722042.1| hypothetical protein Tery_2349 [Trichodesmium erythraeum IMS101]
gi|110167029|gb|ABG51569.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 649
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 124/255 (48%), Gaps = 1/255 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI +GKY A++ +Q ++ +P Y +A RG Q + + A++D+ +AIQ N
Sbjct: 329 NRGIVYRKQGKYDLALADLNQAIQLNPKYADAYKNRGNVYYNQGKYDLALADYNQAIQLN 388
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG G+ AI + ++A++ P A + RG+V ++ A+ D
Sbjct: 389 PKYAEAYNNRGLVYDDQGKYDLAIAEFNQAIQLNPKYAYAYNNRGVVYDDQGKYDLALAD 448
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ + AY G G+Y A + +AIQL+ EA+ + Y+
Sbjct: 449 YNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIADYNQAIQLNPKLAEAYNNRGAVYRKQG 508
Query: 566 NSEKALECLQQVLYI-DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ AL + + + + + Y+ RGL+ + ++ A+ D S + ++P + Y
Sbjct: 509 KYDLALADYNESIRLNNPQLWLPYNNRGLVYNDQRKYDLALADYSQAIQLNPKDAYAYYN 568
Query: 625 RASCYHAIGEYREAV 639
R + Y G+Y A+
Sbjct: 569 RGNVYDDQGKYDLAI 583
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E E A++D+ +AIQ NP +A+ RG G+ A+ DL++A++ P AD R
Sbjct: 305 EFEQALADYNQAIQLNPKYADAYNNRGIVYRKQGKYDLALADLNQAIQLNPKYADAYKNR 364
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G V + ++ A+ D + ++L+ + AY GL G+Y A +AIQL+
Sbjct: 365 GNVYYNQGKYDLALADYNQAIQLNPKYAEAYNNRGLVYDDQGKYDLAIAEFNQAIQLNPK 424
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ + Y D + AL Q + ++ ++++AY+ RG + G++ AI D +
Sbjct: 425 YAYAYNNRGVVYDDQGKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIADYN 484
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEY 635
+ ++P E R + Y G+Y
Sbjct: 485 QAIQLNPKLAEAYNNRGAVYRKQGKY 510
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 117/242 (48%), Gaps = 1/242 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N+GKY A++ ++Q ++ +P Y EA RG Q + + AI++F +AIQ N
Sbjct: 363 NRGNVYYNQGKYDLALADYNQAIQLNPKYAEAYNNRGLVYDDQGKYDLAIAEFNQAIQLN 422
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG G+ A+ D ++A++ P A+ + RG V + ++ A+ D
Sbjct: 423 PKYAYAYNNRGVVYDDQGKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIAD 482
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE-AWGHLTQFYQDL 564
+ ++L+ + AY G G+Y A + ++I+L+ L + + Y D
Sbjct: 483 YNQAIQLNPKLAEAYNNRGAVYRKQGKYDLALADYNESIRLNNPQLWLPYNNRGLVYNDQ 542
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ AL Q + ++ + + AY+ RG + G++ AI D S + ++P Y
Sbjct: 543 RKYDLALADYSQAIQLNPKDAYAYYNRGNVYDDQGKYDLAIADYSQAIQLNPKYANAYYT 602
Query: 625 RA 626
R
Sbjct: 603 RG 604
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++GKY AI+ F+Q ++ +P Y A RG Q + + A++D+ +AIQ N
Sbjct: 397 NRGLVYDDQGKYDLAIAEFNQAIQLNPKYAYAYNNRGVVYDDQGKYDLALADYNQAIQLN 456
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG G+ AI D ++A++ P A+ + RG V K ++ A+ D
Sbjct: 457 PKYAEAYNNRGGVYLEQGKYDLAIADYNQAIQLNPKLAEAYNNRGAVYRKQGKYDLALAD 516
Query: 506 LSACVKLDKENKS-AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++L+ Y GL + +Y A + +AIQL+ A+ + Y D
Sbjct: 517 YNESIRLNNPQLWLPYNNRGLVYNDQRKYDLALADYSQAIQLNPKDAYAYYNRGNVYDDQ 576
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A+ Q + ++ +++ AY+ RGL +KAI D
Sbjct: 577 GKYDLAIADYSQAIQLNPKYANAYYTRGLTNKDQRNMEKAISDF 620
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 111/217 (51%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
++ A++ ++Q ++ +P Y +A RG Q + + A++D +AIQ NP +A+K R
Sbjct: 305 EFEQALADYNQAIQLNPKYADAYNNRGIVYRKQGKYDLALADLNQAIQLNPKYADAYKNR 364
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G G+ A+ D ++A++ P A+ + RG+V ++ A+ + + ++L+ +
Sbjct: 365 GNVYYNQGKYDLALADYNQAIQLNPKYAEAYNNRGLVYDDQGKYDLAIAEFNQAIQLNPK 424
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
AY G+ G+Y A + +AIQL+ + EA+ + Y + + A+
Sbjct: 425 YAYAYNNRGVVYDDQGKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIADYN 484
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
Q + ++ + ++AY+ RG + G++ A+ D + +
Sbjct: 485 QAIQLNPKLAEAYNNRGAVYRKQGKYDLALADYNESI 521
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
+A+ D ++A++ P AD + RGIV K ++ A+ DL+ ++L+ + AY G
Sbjct: 308 QALADYNQAIQLNPKYADAYNNRGIVYRKQGKYDLALADLNQAIQLNPKYADAYKNRGNV 367
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+ G+Y A + +AIQL+ + EA+ + Y D + A+ Q + ++ +++
Sbjct: 368 YYNQGKYDLALADYNQAIQLNPKYAEAYNNRGLVYDDQGKYDLAIAEFNQAIQLNPKYAY 427
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY+ RG++ G++ A+ D + + ++P E R Y G+Y A+
Sbjct: 428 AYNNRGVVYDDQGKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAI 480
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG +GKY A++ +++ ++ +P RG QR+ + A++D+++AIQ
Sbjct: 499 NRGAVYRKQGKYDLALADYNESIRLNNPQLWLPYNNRGLVYNDQRKYDLALADYSQAIQL 558
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG G+ AI D S+A++ P A+ + RG+ N ++ A+
Sbjct: 559 NPKDAYAYYNRGNVYDDQGKYDLAIADYSQAIQLNPKYANAYYTRGLTNKDQRNMEKAIS 618
Query: 505 DLSACVKLDKE 515
D L K+
Sbjct: 619 DFEKAADLYKQ 629
>gi|224588324|gb|ACN58948.1| hypothetical protein AKSOIL_0107 [uncultured bacterium BLR7]
Length = 428
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 34/239 (14%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ N+ YA AI+ +DQ +K DP A GRGT + + A++D+ EAI+ +P
Sbjct: 187 RGMVFSNKKDYARAIADYDQAIKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLDP 246
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG + A G++ AI + SKA+E +P A+ RGI + D+ A++D
Sbjct: 247 NYAEAYGNRGVSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAIQDD 306
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
VKLD +N Y AL++ G +A+EA LA+
Sbjct: 307 DQAVKLDPDNPERYNNRCYALATAG---RAQEA------------------------LAD 339
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
AL ++ + RG LGQ++++I+D + L ++P++ + LY R
Sbjct: 340 CNIALARSPDAAFM-------WDSRGYAYLRLGQYRRSIEDYDAALRLNPTHAQALYGR 391
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 114/246 (46%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
EGKYA A+ F + ++ DP +A RG + + AI+DF AI +P+ ++
Sbjct: 126 EGKYAEAVQAFSRAVERDPNMAQAYAFRGYTHNSLNDYDRAIADFARAIAIDPNDATSFS 185
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + + AI D +A++ +P + RG V D + A+ D ++LD
Sbjct: 186 DRGMVFSNKKDYARAIADYDQAIKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLD 245
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
AY G++ + G+ +A + KAI+LD F A+G+ Y D + E A++
Sbjct: 246 PNYAEAYGNRGVSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAIQD 305
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
Q + +D + Y+ R L G+ ++A+ D + L P R Y +G
Sbjct: 306 DDQAVKLDPDNPERYNNRCYALATAGRAQEALADCNIALARSPDAAFMWDSRGYAYLRLG 365
Query: 634 EYREAV 639
+YR ++
Sbjct: 366 QYRRSI 371
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 373 ISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
+ SK+I +D + + RGIA ++G Y AI DQ +K DP PE R A A
Sbjct: 270 LEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAIQDDDQAVKLDPDNPERYNNRCYALAT 329
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ A++D A+ +P A W RG A LG+ +I+D AL P A L+
Sbjct: 330 AGRAQEALADCNIALARSPDAAFMWDSRGYAYLRLGQYRRSIEDYDAALRLNPTHAQALY 389
Query: 488 ERGIVNFKFKD 498
RG+ K D
Sbjct: 390 GRGVAKLKNGD 400
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG++ +G AI + + ++ DP + A RG A + + E AI D +A++ +
Sbjct: 254 NRGVSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAIQDDDQAVKLD 313
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E + R A A G + EA+ D + AL P++A + RG + + ++ED
Sbjct: 314 PDNPERYNNRCYALATAGRAQEALADCNIALARSPDAAFMWDSRGYAYLRLGQYRRSIED 373
Query: 506 LSACVKLDKENKSAYTYLGLA 526
A ++L+ + A G+A
Sbjct: 374 YDAALRLNPTHAQALYGRGVA 394
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSY 67
L + + + DE +R+D A A R K ++ +SKAI LD A ++
Sbjct: 228 LGDDDRALADYDEAIRLDPNYAEAYGNRGVSFKAKGDNDRAILEYSKAIE-LDPKFANAF 286
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NR Y ++H I+D D+A++LDP + Y + A + GR +EAL+
Sbjct: 287 -----GNRGIAYYDKGDYEHAIQDDDQAVKLDPDNPERYNNRCYALATAGRAQEALA 338
>gi|313203088|ref|YP_004041745.1| hypothetical protein Palpr_0604 [Paludibacter propionicigenes WB4]
gi|312442404|gb|ADQ78760.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
propionicigenes WB4]
Length = 677
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 34/277 (12%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++K P E + R A+ + + A D + AI+ NP +A+ RG
Sbjct: 39 YVLSIQYFNQVIKIKPYLAEPYLNRAIAKIQLGDYQGADKDCSTAIEINPFLPQAYYARG 98
Query: 457 QARAALGESVEAIQDLSKALEFEPNSA--------------------------------- 483
AR + EAI D SKALEF PNS
Sbjct: 99 FARRKMNFDKEAIVDFSKALEFSPNSLYLIMNRLDARVNIKDYDGAMKDVEEYQKLSPKT 158
Query: 484 -DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
IL+E+G + + KD A + ++ D N A++ + + + A + + +
Sbjct: 159 HSILYEKGRIQLEQKDTLGAAKTFELFIQKDSANCLAWSSRAILRMQMNDLDGALKDYSE 218
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI+ + ++ + + + N +AL+ + +DK + AY+ RGLL LG +
Sbjct: 219 AIKRNSTYVGDYINRGIINVERKNYNQALKDYDSAVKLDKSNALAYYNRGLLRANLGDNN 278
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A+ DL++ L +D +N E L +A IGEYR A+
Sbjct: 279 NALTDLNTVLKLDSANTEALLRKAMLEQTIGEYRNAI 315
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 34/226 (15%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R A+VN Y A+ ++ K P L +G + Q++ A F IQ
Sbjct: 129 MNRLDARVNIKDYDGAMKDVEEYQKLSPKTHSILYEKGRIQLEQKDTLGAAKTFELFIQK 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + AW R R + + A++D S+A++ RGI+N + K++N A++
Sbjct: 189 DSANCLAWSSRAILRMQMNDLDGALKDYSEAIKRNSTYVGDYINRGIINVERKNYNQALK 248
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + VKLDK N AY GL +++G+
Sbjct: 249 DYDSAVKLDKSNALAYYNRGLLRANLGD-------------------------------- 276
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ AL L VL +D ++A + +L +G+++ AIKD +
Sbjct: 277 --NNNALTDLNTVLKLDSANTEALLRKAMLEQTIGEYRNAIKDYKT 320
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G Q+ + A F+ +++D A R R +L+ A+ D++EAI+ N
Sbjct: 165 KGRIQLEQKDTLGAAKTFELFIQKDSANCLAWSSRAILRMQMNDLDGALKDYSEAIKRNS 224
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + RG +A++D A++ + ++A + RG++ D N A+ DL
Sbjct: 225 TYVGDYINRGIINVERKNYNQALKDYDSAVKLDKSNALAYYNRGLLRANLGDNNNALTDL 284
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KLD N A + +IGEY+ A + + I F+ A+ + + L N
Sbjct: 285 NTVLKLDSANTEALLRKAMLEQTIGEYRNAIKDYKTIISRYNYFIPAYLGVAEAEAALGN 344
Query: 567 SEKALECLQQVLYIDK 582
+ A + Q I+K
Sbjct: 345 QKGAFQYRQLASNIEK 360
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SR I ++ A+ + + +K + Y I RG ++ A+ D+ A++ +
Sbjct: 198 SRAILRMQMNDLDGALKDYSEAIKRNSTYVGDYINRGIINVERKNYNQALKDYDSAVKLD 257
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S A+ RG RA LG++ A+ DL+ L+ + + + L + ++ ++ A++D
Sbjct: 258 KSNALAYYNRGLLRANLGDNNNALTDLNTVLKLDSANTEALLRKAMLEQTIGEYRNAIKD 317
Query: 506 LSACVKLDKENKSAYTYLGLA 526
+ + N YLG+A
Sbjct: 318 YKTIIS--RYNYFIPAYLGVA 336
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+++ ++ +P + A R Q++ + AI+++T++I+ +P EA+ RG +G
Sbjct: 589 YEKAIELNPDFDFAYFNRANVLCTQKDFQNAIANYTKSIEIDPDFAEAYFNRGLTYLFIG 648
Query: 464 ESVEAIQDLSKALEF 478
E + + DLSKA E
Sbjct: 649 EDTKGLSDLSKAGEL 663
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 107/505 (21%), Positives = 197/505 (39%), Gaps = 87/505 (17%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L+++S+AI+ S + D NR + + + ++D D A++LD + AY
Sbjct: 212 ALKDYSEAIK------RNSTYVGDYINRGIINVERKNYNQALKDYDSAVKLDKSNALAYY 265
Query: 108 LKGCAFSALGRKEEALS------VWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTC 161
+G + LG AL+ + AL + A L+Q + E A K +++
Sbjct: 266 NRGLLRANLGDNNNALTDLNTVLKLDSANTEALLRKAMLEQ--TIGEYRNAIKDYKTIIS 323
Query: 162 EYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLC 221
Y+ + L V+E+ E + + K + Q R ++ K+
Sbjct: 324 RYNYFIP-AYLGVAEA---------EAALGNQKG-----AFQYRQLASNIEKNKD----- 363
Query: 222 NGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDF 281
+IN K +E + N ++ S+ + SR NR + D+
Sbjct: 364 --------------------YINRKNKENIQAKNKLAENSQKSSTSRKTELFNRFAVDN- 402
Query: 282 DICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDN----- 336
D ++ +T G V DK + +N+ Y+K+ + +
Sbjct: 403 -----NADNTDSESKYSTETRGA--VQDKYTD---VVNERGFVLSYYAKADETRHTNLYH 452
Query: 337 KSSDSTESRSKLSFKWDMLKETSNEAKRNKKFC------VTRISK---SKSISVDFRLSR 387
+ DS ++KLS +LK T+NE + + ++S+ S + + D SR
Sbjct: 453 PAIDSYNKKNKLS---SILKITNNELVLTAELIDMHFNIINQLSQKIASDANNADLYFSR 509
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+ Y SA+ +++L P + A R R E I +F +NPS
Sbjct: 510 SLEFTLVQDYKSALDDLNKVLLLRPDFMLAYFCRANVRNKSLEFNK-IQEFN----NNPS 564
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ K+ ++ E+ ++D KA+E P+ R V KDF A+ + +
Sbjct: 565 VDNSKKKTASDNQSVFETEMILRDYEKAIELNPDFDFAYFNRANVLCTQKDFQNAIANYT 624
Query: 508 ACVKLDKENKSAYTYLGLALSSIGE 532
+++D + AY GL IGE
Sbjct: 625 KSIEIDPDFAEAYFNRGLTYLFIGE 649
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 19 TICEIDELVRV-----DSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDIC 73
TIC + +L+ + D +MA A + S++ +++ I+I LA+ Y
Sbjct: 8 TICLLTQLLAMAQWNTDRIMAIGQNALYFEDYVLSIQYFNQVIKI-KPYLAEPY-----L 61
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
NRA QL ++ +DC A++++P L QAY +G A + +EA+ + K E +
Sbjct: 62 NRAIAKIQLGDYQGADKDCSTAIEINPFLPQAYYARGFARRKMNFDKEAIVDFSKALEFS 121
>gi|300869589|ref|ZP_07114170.1| TPR repeat-containing serine/threonin protein kinase [Oscillatoria
sp. PCC 6506]
gi|300332457|emb|CBN59370.1| TPR repeat-containing serine/threonin protein kinase [Oscillatoria
sp. PCC 6506]
Length = 735
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 10/260 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+ + G A AI+ F++ ++ +P E R A + EAAI+D+T+AI
Sbjct: 343 FDRGVEKSQVGDAAGAIAAFNKSIQLNPQSAEVFYKRANANYDLKNYEAAIADYTQAIAL 402
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ +A+ RG R + + AI+D ++ L+ +PN D +ERG+ F +D+ A++
Sbjct: 403 DPNYVKAYFNRGLTRFEIKDLRGAIEDYTQLLKLQPNDPDAYYERGLAYFGLQDYPVAIK 462
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L A+ G+A ++ + + A + +AI+L+ + ++A+ + L
Sbjct: 463 DFTQVIRLQPSLAKAHHARGMARAAGADLQGAMGDYTEAIRLEPSNVDAYYSRGRARFHL 522
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID-----PSNI 619
+ + AL QV+ ID + AY R LG H+ AI D + + ++ P N
Sbjct: 523 GDYKGALADYSQVIRIDSKSVDAYANRCSTQLNLGAHQAAIDDCTQAIALNSQDSVPYNN 582
Query: 620 ECLYLRASCYHAIGEYREAV 639
C+ Y + +Y++A+
Sbjct: 583 RCI-----AYLNLKDYQKAI 597
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 34/272 (12%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T++ K + D RG+A Y AI F Q+++ P +A RG ARA +
Sbjct: 431 TQLLKLQPNDPDAYYERGLAYFGLQDYPVAIKDFTQVIRLQPSLAKAHHARGMARAAGAD 490
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL---- 486
L+ A+ D+TEAI+ PS +A+ RG+AR LG+ A+ D S+ + + S D
Sbjct: 491 LQGAMGDYTEAIRLEPSNVDAYYSRGRARFHLGDYKGALADYSQVIRIDSKSVDAYANRC 550
Query: 487 ------------------------------HERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ R I KD+ A++D S +K++ +N
Sbjct: 551 STQLNLGAHQAAIDDCTQAIALNSQDSVPYNNRCIAYLNLKDYQKAIDDCSQAIKVNPKN 610
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
SAY+ GLA S+ G+ + A + AI L+ N EA+ + + + DL N E AL Q
Sbjct: 611 DSAYSNRGLAHSAAGDREGAVADYTAAIGLNPNDYEAYSNRAKIHYDLKNYEDALADYVQ 670
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ ++ F+ AY RG + LG AI D
Sbjct: 671 AIRLNPNFAAAYVGRGNVRRILGDKPGAISDF 702
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 119/243 (48%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI+ + Q + DP Y +A RG R ++L AI D+T+ ++ P+ +A+ RG
Sbjct: 389 YEAAIADYTQAIALDPNYVKAYFNRGLTRFEIKDLRGAIEDYTQLLKLQPNDPDAYYERG 448
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A L + AI+D ++ + +P+ A H RG+ D A+ D + ++L+ N
Sbjct: 449 LAYFGLQDYPVAIKDFTQVIRLQPSLAKAHHARGMARAAGADLQGAMGDYTEAIRLEPSN 508
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY G A +G+YK A + + I++D ++A+ + +L + A++ Q
Sbjct: 509 VDAYYSRGRARFHLGDYKGALADYSQVIRIDSKSVDAYANRCSTQLNLGAHQAAIDDCTQ 568
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ ++ + S Y+ R + L ++KAI D S + ++P N R + A G+
Sbjct: 569 AIALNSQDSVPYNNRCIAYLNLKDYQKAIDDCSQAIKVNPKNDSAYSNRGLAHSAAGDRE 628
Query: 637 EAV 639
AV
Sbjct: 629 GAV 631
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 127/255 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ + AI + Q+LK P P+A RG A ++ AI DFT+ I+
Sbjct: 411 FNRGLTRFEIKDLRGAIEDYTQLLKLQPNDPDAYYERGLAYFGLQDYPVAIKDFTQVIRL 470
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
PS +A RG ARAA + A+ D ++A+ EP++ D + RG F D+ A+
Sbjct: 471 QPSLAKAHHARGMARAAGADLQGAMGDYTEAIRLEPSNVDAYYSRGRARFHLGDYKGALA 530
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S +++D ++ AY ++G ++ A + +AI L+ + + Y +L
Sbjct: 531 DYSQVIRIDSKSVDAYANRCSTQLNLGAHQAAIDDCTQAIALNSQDSVPYNNRCIAYLNL 590
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ +KA++ Q + ++ + AY RGL G + A+ D ++ +G++P++ E
Sbjct: 591 KDYQKAIDDCSQAIKVNPKNDSAYSNRGLAHSAAGDREGAVADYTAAIGLNPNDYEAYSN 650
Query: 625 RASCYHAIGEYREAV 639
RA ++ + Y +A+
Sbjct: 651 RAKIHYDLKNYEDAL 665
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%)
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ +P+ + RG ++ + AI+ F ++IQ NP + E + +R A L A
Sbjct: 333 RPNPVKAKEYFDRGVEKSQVGDAAGAIAAFNKSIQLNPQSAEVFYKRANANYDLKNYEAA 392
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I D ++A+ +PN RG+ F+ KD A+ED + +KL + AY GLA
Sbjct: 393 IADYTQAIALDPNYVKAYFNRGLTRFEIKDLRGAIEDYTQLLKLQPNDPDAYYERGLAYF 452
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ +Y A + + I+L + +A A+ + A+ + + ++ AY
Sbjct: 453 GLQDYPVAIKDFTQVIRLQPSLAKAHHARGMARAAGADLQGAMGDYTEAIRLEPSNVDAY 512
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ RG LG +K A+ D S + ID +++ R S +G ++ A+
Sbjct: 513 YSRGRARFHLGDYKGALADYSQVIRIDSKSVDAYANRCSTQLNLGAHQAAI 563
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C I+ + SV + +R IA +N Y AI Q +K +P A RG A +
Sbjct: 566 CTQAIALNSQDSVPYN-NRCIAYLNLKDYQKAIDDCSQAIKVNPKNDSAYSNRGLAHSAA 624
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ E A++D+T AI NP+ EA+ R + L +A+ D +A+ PN A
Sbjct: 625 GDREGAVADYTAAIGLNPNDYEAYSNRAKIHYDLKNYEDALADYVQAIRLNPNFAAAYVG 684
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL 512
RG V D A+ D KL
Sbjct: 685 RGNVRRILGDKPGAISDFEKAGKL 708
>gi|75907401|ref|YP_321697.1| hypothetical protein Ava_1178 [Anabaena variabilis ATCC 29413]
gi|75701126|gb|ABA20802.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 280
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 9/227 (3%)
Query: 365 NKKFCVTRI--------SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
NK+ VT I + + S + F + +G Q +G AI+ +D+ + DP Y
Sbjct: 36 NKEVLVTEIGVNPPSRRTTNNSQAGQFYV-QGQRQHAQGDSQGAIASYDKAIGLDPDYGA 94
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A GRG A + + AI+D+ EAI+ +P+ EA+ RG ARA+LG++ AI D ++A+
Sbjct: 95 AYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAI 154
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
PN A+ + RG D + ++ED + ++L+ + AY G A +S G+ + A
Sbjct: 155 RLSPNYAEAYNNRGNARSVQGDKSGSIEDFNQAIRLNPKYAIAYNNRGNARASQGDSQGA 214
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
+ +AI+L+ NF A+ + + + ALE LQ+ I +R
Sbjct: 215 ISDYNQAIRLNSNFGPAYNNRGNARAAQGDKQGALEDLQKAADIFQR 261
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q + + AI+ + +AI +P G A++ RG A LG+ +AI D ++A+ PN A+ +
Sbjct: 72 QGDSQGAIASYDKAIGLDPDYGAAYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFN 131
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG D A+ D + ++L AY G A S G+ + E +AI+L+
Sbjct: 132 SRGNARASLGDNAGAITDYNEAIRLSPNYAEAYNNRGNARSVQGDKSGSIEDFNQAIRLN 191
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ + +S+ A+ Q + ++ F AY+ RG G + A++D
Sbjct: 192 PKYAIAYNNRGNARASQGDSQGAISDYNQAIRLNSNFGPAYNNRGNARAAQGDKQGALED 251
Query: 608 L 608
L
Sbjct: 252 L 252
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 2/192 (1%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E ++ + +N AG+ + + GQ + A G+S AI KA+ +P+ RG+
Sbjct: 43 EIGVNPPSRRTTNNSQAGQFYVQ-GQRQHAQGDSQGAIASYDKAIGLDPDYGAAYRGRGL 101
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F D A+ D + ++L + A+ G A +S+G+ A + +AI+L N+
Sbjct: 102 AYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNYA 161
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + + ++E Q + ++ +++ AY+ RG G + AI D +
Sbjct: 162 EAYNNRGNARSVQGDKSGSIEDFNQAIRLNPKYAIAYNNRGNARASQGDSQGAISDYNQA 221
Query: 612 LGIDPSNIECLY 623
+ ++ SN Y
Sbjct: 222 IRLN-SNFGPAY 232
>gi|429122838|ref|ZP_19183371.1| hypothetical protein A966_00870 [Brachyspira hampsonii 30446]
gi|426281293|gb|EKV58292.1| hypothetical protein A966_00870 [Brachyspira hampsonii 30446]
Length = 800
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 41/234 (17%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI DF +AI E + RG + L E EA++ ++KA+E +P + +ERG++N
Sbjct: 409 AIEDFDKAISIYEGDSEFYYYRGLTSSYLNELDEALKYINKAIELDPKYINAYNERGLIN 468
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK------------------- 534
++ ++N+A+ED ++LD EN A +L L+ ++ EY+
Sbjct: 469 YRNSNYNSAIEDFKNVIELDNENVYANYHLALSYDALEEYETALKYYARVIELEPNTPDA 528
Query: 535 ---------------KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+A E K I +D N ++A+ ++ Y L +KA+EC +V+
Sbjct: 529 FYNRALAEIEMELYHEAIEDFYKVIDIDSNIIDAYFNIGICYDYLKEYQKAIECYTKVIE 588
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
D AY+ RGL GL + +A +D L I+P A+ Y+ IG
Sbjct: 589 TDNYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPK-------YANAYNGIG 635
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 126/287 (43%), Gaps = 36/287 (12%)
Query: 388 GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
G+ + G Y AI+ + ++++ D +Y + R A + E A+ D+ +AI+ NP
Sbjct: 295 GLLEYKLGNYRDAINYYTKMIEINDDIYY-SYYNRALAEESLQLYEDALEDYNKAIELNP 353
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ RG + + EA++D +KA+E E + A + + R ++ + + A+ED
Sbjct: 354 EDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEKDDAYLYNNRALLKGRMHLYKEAIEDF 413
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG----------- 555
+ + + + Y Y GL S + E +A + KAI+LD ++ A+
Sbjct: 414 DKAISIYEGDSEFYYYRGLTSSYLNELDEALKYINKAIELDPKYINAYNERGLINYRNSN 473
Query: 556 -----------------------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
HL Y L E AL+ +V+ ++ A++ R
Sbjct: 474 YNSAIEDFKNVIELDNENVYANYHLALSYDALEEYETALKYYARVIELEPNTPDAFYNRA 533
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + + +AI+D + ID + I+ + CY + EY++A+
Sbjct: 534 LAEIEMELYHEAIEDFYKVIDIDSNIIDAYFNIGICYDYLKEYQKAI 580
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 12/274 (4%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ + VD +RG++ N Y AI FD++++ P A RG ++++ E
Sbjct: 74 INNTHDTLVDAYYNRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGRYE 133
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
I DF + ++ N EA G G+ EAI++ AL + D + RG
Sbjct: 134 EGIKDFKKVLEFNEDDAEAIYYIGLGYFYCGKYQEAIKNFDIALLLDDEIDDAYYYRGHS 193
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ A+ D + V+L ++ +Y L +G Y+ A KAI+LD +F
Sbjct: 194 KRYLNMYEEALSDFNKIVELRYDDSDSYYSKALTEFFLGLYEDAINDFNKAIELDNHFSN 253
Query: 553 AWGH--LT----QFYQD-LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A+ LT + Y+D + + +KALE D+ Y+ GLL + LG ++ AI
Sbjct: 254 AYYFRGLTKNSLELYKDAMDDYKKALEYAD-----DENIINIYNDMGLLEYKLGNYRDAI 308
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + I+ Y RA ++ Y +A+
Sbjct: 309 NYYTKMIEINDDIYYSYYNRALAEESLQLYEDAL 342
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 74/169 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ Y SAI F +++ D A + E E A+ + I+ P
Sbjct: 464 RGLINYRNSNYNSAIEDFKNVIELDNENVYANYHLALSYDALEEYETALKYYARVIELEP 523
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ R A + EAI+D K ++ + N D GI K++ A+E
Sbjct: 524 NTPDAFYNRALAEIEMELYHEAIEDFYKVIDIDSNIIDAYFNIGICYDYLKEYQKAIECY 583
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ ++ D + AY GL+ + Y +A E +++A++++ + A+
Sbjct: 584 TKVIETDNYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPKYANAYN 632
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y +A+ + ++++ +P P+A R A AI DF + I + + +A+
Sbjct: 507 EYETALKYYARVIELEPNTPDAFYNRALAEIEMELYHEAIEDFYKVIDIDSNIIDAYFNI 566
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L E +AI+ +K +E + S D + RG+ K +N A ED ++++ +
Sbjct: 567 GICYDYLKEYQKAIECYTKVIETDNYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPK 626
Query: 516 NKSAYTYLGLA 526
+AY +G +
Sbjct: 627 YANAYNGIGFS 637
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 331 SSISDNKS-----SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
S+I D K+ +++ + L+ +D L+E K R+ + + + D
Sbjct: 476 SAIEDFKNVIELDNENVYANYHLALSYDALEEYETALK-----YYARVIELEPNTPDAFY 530
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A++ Y AI F +++ D +A G + +E + AI +T+ I+++
Sbjct: 531 NRALAEIEMELYHEAIEDFYKVIDIDSNIIDAYFNIGICYDYLKEYQKAIECYTKVIETD 590
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ +A+ RG ++ L EA +D +ALE P A+ + G K+
Sbjct: 591 NYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPKYANAYNGIGFSKTKY 641
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
NR Y L+ ++ I+D DK ++L P AY +G + S LGR EE + ++K
Sbjct: 87 NRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGRYEEGIKDFKK 141
>gi|428297688|ref|YP_007135994.1| hypothetical protein Cal6303_0957 [Calothrix sp. PCC 6303]
gi|428234232|gb|AFZ00022.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 331
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 127/265 (47%), Gaps = 8/265 (3%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF L +G + + + A++ + + +K DP Y A RG R + + A++D+ +A
Sbjct: 17 DF-LIKGNEKYEKKDFRGALADYSEAIKLDPNYANAYGNRGATRKELGDKQGALADYNQA 75
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP+ A+ RG R LG+ A+ D ++A++ PN A + RG ++ D
Sbjct: 76 IKINPNYANAYGNRGATRDELGDKQGALADYNQAIKINPNDAIAYNRRGYFRYELGDKQG 135
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE-------AHLKAIQLDRNFLEAW 554
A+ DL+ + ++ AY G +G+ + A + + +AI+++ N + +
Sbjct: 136 AIADLNQAIIINPNYADAYNSRGYVRYELGDKQGAIDDLNQALADYNQAIKINPNDAQVY 195
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
L + + A++ L Q + I+ ++ A GL+ + G + AIK + I
Sbjct: 196 SGRGYARYRLGDKQGAIDDLNQAIKINPKYRDAIIFIGLIKYEDGDRETAIKQWQEAITI 255
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
DP + E L ++ H G+ ++AV
Sbjct: 256 DPKSAEPLLALSTALHKKGQRQQAV 280
>gi|158523125|ref|YP_001530995.1| hypothetical protein Dole_3115 [Desulfococcus oleovorans Hxd3]
gi|158511951|gb|ABW68918.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
Length = 284
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 3/253 (1%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
+A V G+Y A+ F ++L P + A R AR + E A++D+ A+ NP
Sbjct: 1 MASVQAGQYDKAVEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDF 60
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
E++ RG+A +G+ +A+ DL +A+E P+ AD + RG+ K DF A+ D S
Sbjct: 61 PESYNGRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTGDFIGALADHSR 120
Query: 509 CVKLDKENKSA--YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++ + +++A Y G+ G+ KA A+ + F A+ +L + +
Sbjct: 121 AIQM-RPDRAAEFYNARGVTWLEKGDPDKAIADFTAALAENPGFAWAYNNLASAWMEKGQ 179
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++A+ + L I R ++A RG + G + A+ DL + PS Y RA
Sbjct: 180 PDRAMAAYDKALSIFPRMAEALSGRGSVRAQAGDYTGALADLDKAIEFYPSYHTAYYNRA 239
Query: 627 SCYHAIGEYREAV 639
Y G +A+
Sbjct: 240 RVYQLTGNREKAL 252
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 4/254 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V ++ +S DF + R A+ + G Y A++ +++ L +P +PE+ GRG A
Sbjct: 12 AVEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDFPESYNGRGKAF 71
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN-SAD 484
+++ A++D A++ P +A+ RG A G+ + A+ D S+A++ P+ +A+
Sbjct: 72 CDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTGDFIGALADHSRAIQMRPDRAAE 131
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ RG+ + D + A+ D +A + + AY L A G+ +A A+ KA+
Sbjct: 132 FYNARGVTWLEKGDPDKAIADFTAALAENPGFAWAYNNLASAWMEKGQPDRAMAAYDKAL 191
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ EA + AL L + + + AY+ R + G +KA
Sbjct: 192 SIFPRMAEALSGRGSVRAQAGDYTGALADLDKAIEFYPSYHTAYYNRARVYQLTGNREKA 251
Query: 605 IKDLSSGLGIDPSN 618
+ + +G+ P+N
Sbjct: 252 LANAVKAVGLFPNN 265
>gi|445062671|ref|ZP_21375019.1| hypothetical protein H263_04638, partial [Brachyspira hampsonii
30599]
gi|444505943|gb|ELV06357.1| hypothetical protein H263_04638, partial [Brachyspira hampsonii
30599]
Length = 324
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 121/248 (48%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
NE Y SA+ + LK + + A RG E A+ DF +AI+ N + EA+
Sbjct: 55 NENSYKSAVEDYTWALKLNDKFAAAYYNRGIINRSLGNTENALKDFDKAIELNYNLEEAY 114
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
R +A+L + +I+D +KA+E P+ AD + R + ++ A++D ++
Sbjct: 115 YVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEY 174
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ AY G +G Y +A + + AI ++R F + + + + + + A+E
Sbjct: 175 NSHFIDAYNNRGNVKEKLGNYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVE 234
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+++ I + KAY RG++ + +++AIKD + +DP+ + Y +A + +
Sbjct: 235 DFDELIKIAPNYLKAYLNRGIIAMTMEAYQEAIKDFDKVIELDPNIADAYYNKAVALNHL 294
Query: 633 GEYREAVI 640
G Y EA++
Sbjct: 295 GIYDEAIL 302
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 124/243 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + G +A+ FD+ ++ + EA R +A ++ + +I D+ +AI+
Sbjct: 82 NRGIINRSLGNTENALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEVY 141
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ R ++ ALGE EAI+D KA+E+ + D + RG V K ++N A++D
Sbjct: 142 PHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNYNEAIDD 201
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + +++E Y A I +YK A E + I++ N+L+A+ + +
Sbjct: 202 YTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKIAPNYLKAYLNRGIIAMTME 261
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A++ +V+ +D + AY+ + + L+ LG + +AI + ++P E + R
Sbjct: 262 AYQEAIKDFDKVIELDPNIADAYYNKAVALNHLGIYDEAILYYDQAIKLNPDYSESYFNR 321
Query: 626 ASC 628
+
Sbjct: 322 GNF 324
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI---GEYKKAEEAHLKAIQLDRNF 550
FK K++N A+E S +KLD AY A ++I YK A E + A++L+ F
Sbjct: 17 FKNKNYNLAIEYFSEVIKLDSTIYEAYYNRANAKANIDNENSYKSAVEDYTWALKLNDKF 76
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + + L N+E AL+ + + ++ +AY++R L +K +I+D +
Sbjct: 77 AAAYYNRGIINRSLGNTENALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNK 136
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + P + Y RA +A+GEY+EA+
Sbjct: 137 AIEVYPHFADAYYNRALSKNALGEYKEAI 165
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 49 LRNWSKAIRILDSLL--AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++++ A+ D L+ A +Y ++ NR +E ++ I+D DK ++LDP + AY
Sbjct: 226 IKDYKGAVEDFDELIKIAPNY-LKAYLNRGIIAMTMEAYQEAIKDFDKVIELDPNIADAY 284
Query: 107 ILKGCAFSALGRKEEALSVWEKG 129
K A + LG +EA+ +++
Sbjct: 285 YNKAVALNHLGIYDEAILYYDQA 307
>gi|126347672|emb|CAJ89386.1| putative TPR repeat protein [Streptomyces ambofaciens ATCC 23877]
Length = 1035
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 4/256 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A + G+Y A++ + +P Y AL RG A + A++DFT A+ +
Sbjct: 562 SRGQAHLQAGRYDQAVADLTAAIDSNPSYDWALSQRGEAHRLAGRYDQAVTDFTAALAID 621
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ G A RGQA G +A+ DL+ AL+ P +L +RG + ++ AV D
Sbjct: 622 PAYGWALASRGQAHLQAGRYDQAVADLTAALDLNPTDDWVLGQRGAAHRLAGRYDDAVTD 681
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQD 563
L+A + L + G A G Y++A A L A D N + W G ++
Sbjct: 682 LTAALDLAPASAGLLGQRGEAHLMAGRYEQA-VADLTAAH-DLNPTDDWVLGQRGAAHRL 739
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ A+ L ID + A RG ++ +A+ DL++ L IDP+N L
Sbjct: 740 AGRYDDAVTDFTAALAIDPAYDWALASRGAAHRQAERYDQAVTDLTAALAIDPANDWALA 799
Query: 624 LRASCYHAIGEYREAV 639
R + + G Y +AV
Sbjct: 800 QRGAAHRLAGRYDQAV 815
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 114/261 (43%), Gaps = 1/261 (0%)
Query: 380 SVDFRLS-RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
S D+ LS RG A G+Y A++ F L DP Y AL RG A + A++D
Sbjct: 589 SYDWALSQRGEAHRLAGRYDQAVTDFTAALAIDPAYGWALASRGQAHLQAGRYDQAVADL 648
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
T A+ NP+ +RG A G +A+ DL+ AL+ P SA +L +RG +
Sbjct: 649 TAALDLNPTDDWVLGQRGAAHRLAGRYDDAVTDLTAALDLAPASAGLLGQRGEAHLMAGR 708
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ AV DL+A L+ + G A G Y A A+ +D + A
Sbjct: 709 YEQAVADLTAAHDLNPTDDWVLGQRGAAHRLAGRYDDAVTDFTAALAIDPAYDWALASRG 768
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++ ++A+ L L ID A RG G++ +A+ DL++ L I P+
Sbjct: 769 AAHRQAERYDQAVTDLTAALAIDPANDWALAQRGAAHRLAGRYDQAVTDLTAALAITPAY 828
Query: 619 IECLYLRASCYHAIGEYREAV 639
L R + G Y +AV
Sbjct: 829 PWALAQRGESHRLAGRYEQAV 849
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+++F AI + AW RG+ LG +AI DL+ AL+ P L RG
Sbjct: 506 EEALTEFDRAIGYDARNAHAWGSRGETHRWLGRYDQAITDLTTALDINPGDDWALASRGQ 565
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + ++ AV DL+A + + A + G A G Y +A A+ +D +
Sbjct: 566 AHLQAGRYDQAVADLTAAIDSNPSYDWALSQRGEAHRLAGRYDQAVTDFTAALAIDPAYG 625
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A Q + ++A+ L L ++ RG G++ A+ DL++
Sbjct: 626 WALASRGQAHLQAGRYDQAVADLTAALDLNPTDDWVLGQRGAAHRLAGRYDDAVTDLTAA 685
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
L + P++ L R + G Y +AV
Sbjct: 686 LDLAPASAGLLGQRGEAHLMAGRYEQAV 713
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A++ F L DP Y AL RG A + A++D T A+ +P
Sbjct: 733 RGAAHRLAGRYDDAVTDFTAALAIDPAYDWALASRGAAHRQAERYDQAVTDLTAALAIDP 792
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A +RG A G +A+ DL+ AL P L +RG + + AV D
Sbjct: 793 ANDWALAQRGAAHRLAGRYDQAVTDLTAALAITPAYPWALAQRGESHRLAGRYEQAVTDF 852
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+A + L+ + A G A G Y++A
Sbjct: 853 TAALDLNPTDDWALASRGQAHQLAGRYEQA 882
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 369 CVTRISKSKSISV--DFRLS-RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
VT ++ + +I D+ L+ RG A G+Y A++ L P YP AL RG +
Sbjct: 780 AVTDLTAALAIDPANDWALAQRGAAHRLAGRYDQAVTDLTAALAITPAYPWALAQRGESH 839
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E A++DFT A+ NP+ A RGQA G +A+ D + A++ P A
Sbjct: 840 RLAGRYEQAVTDFTAALDLNPTDDWALASRGQAHQLAGRYEQAVTDFTAAVDIAPTLAWP 899
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
L RG + + + A DL V + E+
Sbjct: 900 LGMRGRAHRQAGHYARARADLERAVAWEPED 930
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 4/235 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + G+Y A++ +P L RG A + A++DFT A+ +P
Sbjct: 699 RGEAHLMAGRYEQAVADLTAAHDLNPTDDWVLGQRGAAHRLAGRYDDAVTDFTAALAIDP 758
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A RG A +A+ DL+ AL +P + L +RG + ++ AV DL
Sbjct: 759 AYDWALASRGAAHRQAERYDQAVTDLTAALAIDPANDWALAQRGAAHRLAGRYDQAVTDL 818
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT--QFYQDL 564
+A + + A G + G Y++A A LD N + W + Q +Q
Sbjct: 819 TAALAITPAYPWALAQRGESHRLAGRYEQAVTDFTAA--LDLNPTDDWALASRGQAHQLA 876
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
E+A+ + I + +RG G + +A DL + +P ++
Sbjct: 877 GRYEQAVTDFTAAVDIAPTLAWPLGMRGRAHRQAGHYARARADLERAVAWEPEDV 931
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 3/171 (1%)
Query: 369 CVTRISKSKSI--SVDFRL-SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
VT + + +I + D+ L SRG A +Y A++ L DP AL RG A
Sbjct: 746 AVTDFTAALAIDPAYDWALASRGAAHRQAERYDQAVTDLTAALAIDPANDWALAQRGAAH 805
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ A++D T A+ P+ A +RG++ G +A+ D + AL+ P
Sbjct: 806 RLAGRYDQAVTDLTAALAITPAYPWALAQRGESHRLAGRYEQAVTDFTAALDLNPTDDWA 865
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
L RG + + AV D +A V + G A G Y +A
Sbjct: 866 LASRGQAHQLAGRYEQAVTDFTAAVDIAPTLAWPLGMRGRAHRQAGHYARA 916
>gi|33863210|ref|NP_894770.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
9313]
gi|33635127|emb|CAE21113.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
Length = 334
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 121/251 (48%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A+V G Y +AI+ +++ + +P +A RG A++ + + AI+DF +AI+ NP
Sbjct: 53 GNAKVGSGDYQAAIADYNKAIVINPKDADAYNNRGLAKSKSGDNQGAIADFNKAIEINPQ 112
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ RG A++ G++ AI D + A+ P RG+ + A+ D +
Sbjct: 113 YVRAYNNRGLAKSKSGDNQGAIVDYNMAIAINPVYLYGFLNRGLAKKNLNKYQEAIVDYN 172
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ ++ + AY GLA + +Y+ A KAI L+ A+ + ++
Sbjct: 173 KAIVINPQLAVAYHKRGLAKVDLKDYQGAIADFNKAITLNPKDAAAYNNRGAVKGKSGDN 232
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+ A+ + + ID +++ AY RGL + LG ++ AI D S + IDP ++ R
Sbjct: 233 QAAIADFNKAIEIDLQYADAYINRGLAKYNLGDNQGAITDYSEAIKIDPQDVFAYNNRGY 292
Query: 628 CYHAIGEYREA 638
+ +Y+ A
Sbjct: 293 VTWKLKDYQSA 303
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+A+ N KY AI +++ + +P A RG A+ ++ + AI+DF +AI
Sbjct: 152 LNRGLAKKNLNKYQEAIVDYNKAIVINPQLAVAYHKRGLAKVDLKDYQGAIADFNKAITL 211
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG + G++ AI D +KA+E + AD RG+ + D A+
Sbjct: 212 NPKDAAAYNNRGAVKGKSGDNQAAIADFNKAIEIDLQYADAYINRGLAKYNLGDNQGAIT 271
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D S +K+D ++ AY G + +Y+ A KA L W
Sbjct: 272 DYSEAIKIDPQDVFAYNNRGYVTWKLKDYQSACNDFKKAASLGSQSTAQW 321
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 90/188 (47%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+K+ G A+ G+ AI D +KA+ P AD + RG+ K D A+ D + ++
Sbjct: 49 YKKSGNAKVGSGDYQAAIADYNKAIVINPKDADAYNNRGLAKSKSGDNQGAIADFNKAIE 108
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
++ + AY GLA S G+ + A + AI ++ +L + + ++L ++A+
Sbjct: 109 INPQYVRAYNNRGLAKSKSGDNQGAIVDYNMAIAINPVYLYGFLNRGLAKKNLNKYQEAI 168
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+ + I+ + + AYH RGL L ++ AI D + + ++P + R +
Sbjct: 169 VDYNKAIVINPQLAVAYHKRGLAKVDLKDYQGAIADFNKAITLNPKDAAAYNNRGAVKGK 228
Query: 632 IGEYREAV 639
G+ + A+
Sbjct: 229 SGDNQAAI 236
>gi|17231265|ref|NP_487813.1| serine/threonine kinase [Nostoc sp. PCC 7120]
gi|17132907|dbj|BAB75472.1| serine/threonine kinase [Nostoc sp. PCC 7120]
Length = 707
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 118/244 (48%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+S ++Q + P Y A G+G ++ + A++ + +AIQ P EAW R
Sbjct: 344 RYKDALSAYEQAVDIRPDYAPAWQGKGKTLFRLKQYQDALTAYDKAIQIQPDYVEAWSGR 403
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + L EAI KAL+ N ++ + RG K ++ A++ ++ + +
Sbjct: 404 GFSLQNLQRYSEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDQAIKSYDKAIEFNSD 463
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
++ GLAL S+ EY +A A+ KAI++ ++ AW +L +L E A +
Sbjct: 464 AYESFYNKGLALQSMKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYEDAFKAYD 523
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + ++ A+ RG +L L ++ +A++ + + +P+N + Y R H Y
Sbjct: 524 KAVQYKTDYAIAWLSRGNVLIILRRYPEALESFNQVIKFNPNNYQAWYGRGWSQHQNQRY 583
Query: 636 REAV 639
EA+
Sbjct: 584 AEAI 587
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 34/253 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + N +Y+ AI+ FD+ L+ + YPE RG A + ++ + AI + +AI+ N
Sbjct: 403 RGFSLQNLQRYSEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDQAIKSYDKAIEFNS 462
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A E++ +G A ++ E EAI +KA+E + + +ER N
Sbjct: 463 DAYESFYNKGLALQSMKEYNEAINAYNKAIEIKSD-----YERAWYN------------- 504
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
LG +L ++ Y+ A +A+ KA+Q ++ AW L
Sbjct: 505 ----------------LGNSLVNLNRYEDAFKAYDKAVQYKTDYAIAWLSRGNVLIILRR 548
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ALE QV+ + +A++ RG H ++ +AI+ I PSN E Y
Sbjct: 549 YPEALESFNQVIKFNPNNYQAWYGRGWSQHQNQRYAEAIESYKKAATIKPSNYEIWYSLG 608
Query: 627 SCYHAIGEYREAV 639
+ + + +Y+EA+
Sbjct: 609 NSQYILQQYQEAI 621
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 77/313 (24%)
Query: 380 SVDFRLSRGIAQVNEGK-------YASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+VD R A +GK Y A++ +D+ ++ P Y EA GRG + +
Sbjct: 355 AVDIRPDYAPAWQGKGKTLFRLKQYQDALTAYDKAIQIQPDYVEAWSGRGFSLQNLQRYS 414
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+ F +A+Q N + E W RG+A + L + +AI+ KA+EF ++ + + +G+
Sbjct: 415 EAIASFDKALQLNENYPEVWNARGEAFSNLKQYDQAIKSYDKAIEFNSDAYESFYNKGLA 474
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-- 550
K++N A+ + +++ + + A+ LG +L ++ Y+ A +A+ KA+Q ++
Sbjct: 475 LQSMKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYEDAFKAYDKAVQYKTDYAI 534
Query: 551 ------------------LEAWGHLTQF----YQ-------------------------- 562
LE++ + +F YQ
Sbjct: 535 AWLSRGNVLIILRRYPEALESFNQVIKFNPNNYQAWYGRGWSQHQNQRYAEAIESYKKAA 594
Query: 563 -----------DLANSEKALECLQQ--------VLYIDKRFSKAYHLRGLLLHGLGQHKK 603
L NS+ L+ Q+ V Y K ++++ RG L L Q+K+
Sbjct: 595 TIKPSNYEIWYSLGNSQYILQQYQEAIASYNKAVRYRPKHI-ESWYSRGNALFSLKQYKE 653
Query: 604 AIKDLSSGLGIDP 616
AI + P
Sbjct: 654 AIASYEQAIKHKP 666
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+A L ++G F+ + + A+ V + + A+ G L + +Y+ A A+
Sbjct: 327 NNATDLAKKGNTFFELQRYKDALSAYEQAVDIRPDYAPAWQGKGKTLFRLKQYQDALTAY 386
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAIQ+ +++EAW Q+L +A+ + L +++ + + ++ RG L Q
Sbjct: 387 DKAIQIQPDYVEAWSGRGFSLQNLQRYSEAIASFDKALQLNENYPEVWNARGEAFSNLKQ 446
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +AIK + + E Y + ++ EY EA+
Sbjct: 447 YDQAIKSYDKAIEFNSDAYESFYNKGLALQSMKEYNEAI 485
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/161 (18%), Positives = 77/161 (47%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++G L +A+ +A++ P+ A +G F+ K + A+ +++
Sbjct: 334 KKGNTFFELQRYKDALSAYEQAVDIRPDYAPAWQGKGKTLFRLKQYQDALTAYDKAIQIQ 393
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ A++ G +L ++ Y +A + KA+QL+ N+ E W + + +L ++A++
Sbjct: 394 PDYVEAWSGRGFSLQNLQRYSEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDQAIKS 453
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + + ++++ +GL L + ++ +AI + + I
Sbjct: 454 YDKAIEFNSDAYESFYNKGLALQSMKEYNEAINAYNKAIEI 494
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L + KAI+I Q ++ R F L+ + I DKALQL+ + +
Sbjct: 382 ALTAYDKAIQI------QPDYVEAWSGRGFSLQNLQRYSEAIASFDKALQLNENYPEVWN 435
Query: 108 LKGCAFSALGRKEEALSVWEK-------GYEHALHQSADLKQFLELEELLTAAKQDRSVT 160
+G AFS L + ++A+ ++K YE ++ L+ E E + A + +
Sbjct: 436 ARGEAFSNLKQYDQAIKSYDKAIEFNSDAYESFYNKGLALQSMKEYNEAINAYNKAIEIK 495
Query: 161 CEYD-----VSNSMSSLTVSESGLNANDK 184
+Y+ + NS+ +L E A DK
Sbjct: 496 SDYERAWYNLGNSLVNLNRYEDAFKAYDK 524
>gi|354565547|ref|ZP_08984721.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353548420|gb|EHC17865.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 279
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 2/191 (1%)
Query: 366 KKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
K+ RI ++ + D ++G+ + N+G AI+ F + DP A + RG R
Sbjct: 34 KQITSPRIEQAATTKADDFYNQGVNKYNQGDLEGAIAAFSAAIGLDPNDAIAYVNRGYTR 93
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AI DFT AI+ NP A+ RG +R LG S AIQD ++A+ +PN A
Sbjct: 94 YDLGDKQGAIEDFTAAIRLNPRDPVAYVNRGYSRYDLGNSQSAIQDYNRAINLDPNYALA 153
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ D A+ED S ++L+ + AY G G++K A E + +A++
Sbjct: 154 YYNRGLARNDLGDKKGALEDYSTAIRLNPNDALAYVGRGNVRDEQGDHKGAIEDYNQAVR 213
Query: 546 LDRNFLEAWGH 556
L+ N EA+ +
Sbjct: 214 LNPN--EAFAY 222
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + Q +LE AI+ F+ AI +P+ A+ RG R LG+ AI+D + A+ P
Sbjct: 55 QGVNKYNQGDLEGAIAAFSAAIGLDPNDAIAYVNRGYTRYDLGDKQGAIEDFTAAIRLNP 114
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
RG + + +A++D + + LD AY GLA + +G+ K A E +
Sbjct: 115 RDPVAYVNRGYSRYDLGNSQSAIQDYNRAINLDPNYALAYYNRGLARNDLGDKKGALEDY 174
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
AI+L+ N A+ + + + A+E Q + ++ + AY+ RG+ +
Sbjct: 175 STAIRLNPNDALAYVGRGNVRDEQGDHKGAIEDYNQAVRLNPNEAFAYYNRGVTRYNQAD 234
Query: 601 HKKAIKDL 608
+ AI+D
Sbjct: 235 YFGAIEDF 242
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + + G AI F ++ +P P A + RG +R ++AI D+ AI
Sbjct: 87 VNRGYTRYDLGDKQGAIEDFTAAIRLNPRDPVAYVNRGYSRYDLGNSQSAIQDYNRAINL 146
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ RG AR LG+ A++D S A+ PN A RG V + D A+E
Sbjct: 147 DPNYALAYYNRGLARNDLGDKKGALEDYSTAIRLNPNDALAYVGRGNVRDEQGDHKGAIE 206
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + V+L+ AY G+ + +Y A E KA L FL G+ TQ+ Q L
Sbjct: 207 DYNQAVRLNPNEAFAYYNRGVTRYNQADYFGAIEDFEKAADL---FLR-QGNTTQYQQVL 262
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ AI S A+ +PN A RG + D A+ED +A ++L+ + AY
Sbjct: 63 GDLEGAIAAFSAAIGLDPNDAIAYVNRGYTRYDLGDKQGAIEDFTAAIRLNPRDPVAYVN 122
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
G + +G + A + + +AI LD N+ A+ + DL + + ALE + ++
Sbjct: 123 RGYSRYDLGNSQSAIQDYNRAINLDPNYALAYYNRGLARNDLGDKKGALEDYSTAIRLNP 182
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AY RG + G HK AI+D + + ++P+ Y R + +Y A+
Sbjct: 183 NDALAYVGRGNVRDEQGDHKGAIEDYNQAVRLNPNEAFAYYNRGVTRYNQADYFGAI 239
>gi|432328071|ref|YP_007246215.1| tetratricopeptide repeat protein [Aciduliprofundum sp. MAR08-339]
gi|432134780|gb|AGB04049.1| tetratricopeptide repeat protein [Aciduliprofundum sp. MAR08-339]
Length = 596
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 131/276 (47%), Gaps = 13/276 (4%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDP------MYPEALIGRGT 423
V R K + +F+ +A VN Y A + +++K+ + GRG
Sbjct: 95 VIRAGLKKFKNENFQYLSAVALVNAEDYNLAEKVLRELMKKGAKDLHFVVLGNIYFGRG- 153
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
E E A+ + A++ NP EAW +G LG EA++ +ALE EP+
Sbjct: 154 ------EKEKALEFYDRALEENPENVEAWNNKGFLLFTLGLYEEALKCYDRALEIEPSYK 207
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ + RG + +AAV D +++D ++ A+ +G AL ++ Y ++ +K+
Sbjct: 208 EAWYNRGYTHHAMGQLSAAVADYWHALRIDSRDEIAWNNMGNALYNLKHYMESIPYFMKS 267
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
+ ++ N+ AW ++ + + ++ ++ L I+ +F A+H +G L LG++++
Sbjct: 268 VSVNPNYEIAWNNIGNALDRMHMHKYSIPFHEKALSINPKFDYAWHAKGHALCELGKYEE 327
Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A++ L + + +DP E Y R + + Y EA+
Sbjct: 328 ALECLENAIDLDPDYGETWYWRGLALYKLERYEEAI 363
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G G+ A+ +D+ L+E+P EA +G E A+ + A++ PS
Sbjct: 146 GNIYFGRGEKEKALEFYDRALEENPENVEAWNNKGFLLFTLGLYEEALKCYDRALEIEPS 205
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EAW RG A+G+ A+ D AL + + G + K + ++
Sbjct: 206 YKEAWYNRGYTHHAMGQLSAAVADYWHALRIDSRDEIAWNNMGNALYNLKHYMESIPYFM 265
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
V ++ + A+ +G AL + +K + H KA+ ++ F AW +L
Sbjct: 266 KSVSVNPNYEIAWNNIGNALDRMHMHKYSIPFHEKALSINPKFDYAWHAKGHALCELGKY 325
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E+ALECL+ + +D + + ++ RGL L+ L ++++AI+ L + D + ++ L
Sbjct: 326 EEALECLENAIDLDPDYGETWYWRGLALYKLERYEEAIESLKIAMERDTTLVKAPELIGD 385
Query: 628 CYHAIGEYREAV 639
Y +G E+V
Sbjct: 386 IYDFLGYPTESV 397
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 4/235 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + R + + EG Y AIS + LK++P E G A E + A S + +
Sbjct: 6 DVEIDRALELMMEGYYREAISHLEIALKKNPDNYEIWFYLGNAYYAVGEYKRARSSYLKV 65
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL-EFEPNSADILHERGIVNFKFKDFN 500
+ NPS E + +G A + + L +F+ + L +VN +D+N
Sbjct: 66 LSLNPSFPEVYLSLANLYVRMGNLKRARRVIRAGLKKFKNENFQYLSAVALVN--AEDYN 123
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A + L +K ++ + LG GE +KA E + +A++ + +EAW +
Sbjct: 124 LAEKVLRELMKKGAKDLH-FVVLGNIYFGRGEKEKALEFYDRALEENPENVEAWNNKGFL 182
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
L E+AL+C + L I+ + +A++ RG H +GQ A+ D L ID
Sbjct: 183 LFTLGLYEEALKCYDRALEIEPSYKEAWYNRGYTHHAMGQLSAAVADYWHALRID 237
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 34/202 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G G Y A+ +D+ L+ +P Y EA RG +L AA++D+ A++ +
Sbjct: 178 NKGFLLFTLGLYEEALKCYDRALEIEPSYKEAWYNRGYTHHAMGQLSAAVADYWHALRID 237
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS-------------------ADIL 486
AW G A L +E+I K++ PN +
Sbjct: 238 SRDEIAWNNMGNALYNLKHYMESIPYFMKSVSVNPNYEIAWNNIGNALDRMHMHKYSIPF 297
Query: 487 HERGI-VNFKFK--------------DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
HE+ + +N KF + A+E L + LD + + + GLAL +
Sbjct: 298 HEKALSINPKFDYAWHAKGHALCELGKYEEALECLENAIDLDPDYGETWYWRGLALYKLE 357
Query: 532 EYKKAEEAHLKAIQLDRNFLEA 553
Y++A E+ A++ D ++A
Sbjct: 358 RYEEAIESLKIAMERDTTLVKA 379
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A N Y +I F + + +P Y A G A + +I +A+ NP
Sbjct: 248 GNALYNLKHYMESIPYFMKSVSVNPNYEIAWNNIGNALDRMHMHKYSIPFHEKALSINPK 307
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW +G A LG+ EA++ L A++ +P+ + + RG+ +K + + A+E L
Sbjct: 308 FDYAWHAKGHALCELGKYEEALECLENAIDLDPDYGETWYWRGLALYKLERYEEAIESLK 367
Query: 508 ACVKLDKENKSA-------YTYLGLALSSIGEYKKA 536
++ D A Y +LG S+ Y+ A
Sbjct: 368 IAMERDTTLVKAPELIGDIYDFLGYPTESVKYYEIA 403
>gi|427720339|ref|YP_007068333.1| serine/threonine protein kinase [Calothrix sp. PCC 7507]
gi|427352775|gb|AFY35499.1| serine/threonine protein kinase with TPR repeats [Calothrix sp. PCC
7507]
Length = 670
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + A+ D T+AI+ NP A+ RRG A LGE +A D SKA++ P
Sbjct: 316 RGVGKYEIGNYSGAVKDLTQAIELNPKNALAYNRRGDAFYRLGEYQKAQADSSKAIQLNP 375
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A+ ++RG ++ + AA+ D + + L+ N AY G+A + +++ A
Sbjct: 376 RDANAYYDRGFTFYELGKYPAAIADYTKAITLNSRNAYAYYGRGIARVQMKDHQGAFGDF 435
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI L N+ EA+ + L + A++ L + ++ +KAY+ RGL Q
Sbjct: 436 SKAIALKSNYTEAYLQRGIIRRRLKQKQAAIQDLDAAIELNPNDAKAYYQRGLAQFSNQQ 495
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
A+ D ++ + + P IE R + +G EA
Sbjct: 496 KHAAVSDFTNAINLSPKYIEAYLSRGDAHSELGNKLEA 533
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 20/279 (7%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I ++ R RG GKY +AI+ + + + + A GRG AR ++
Sbjct: 368 SKAIQLNPRDANAYYDRGFTFYELGKYPAAIADYTKAITLNSRNAYAYYGRGIARVQMKD 427
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A DF++AI + EA+ +RG R L + AIQDL A+E PN A ++RG
Sbjct: 428 HQGAFGDFSKAIALKSNYTEAYLQRGIIRRRLKQKQAAIQDLDAAIELNPNDAKAYYQRG 487
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN- 549
+ F + +AAV D + + L + AY G A S +G +A + K +Q++
Sbjct: 488 LAQFSNQQKHAAVSDFTNAINLSPKYIEAYLSRGDAHSELGNKLEATADYNKVLQINPKS 547
Query: 550 ---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++ H F + + A++ Q + +D + + AY+ RG + G K A +
Sbjct: 548 SIAYVRRGAHRFSF----GDVQGAIKDYTQAIKLDSKNAAAYNNRGNVHLERGNQKAASE 603
Query: 607 DLSSGLGIDPSNIECLYLRASC-------YHAIGEYREA 638
D S + ++PS Y R AIG++++A
Sbjct: 604 DYSQAIKVNPSYALAYYNRGLIKAKQGNRASAIGDFQQA 642
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A + + ++ +P A RG + AAI+D+T+AI N
Sbjct: 350 RGDAFYRLGEYQKAQADSSKAIQLNPRDANAYYDRGFTFYELGKYPAAIADYTKAITLNS 409
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG AR + + A D SKA+ + N + +RGI+ + K AA++DL
Sbjct: 410 RNAYAYYGRGIARVQMKDHQGAFGDFSKAIALKSNYTEAYLQRGIIRRRLKQKQAAIQDL 469
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A ++L+ + AY GLA S + A AI L ++EA+ + +L N
Sbjct: 470 DAAIELNPNDAKAYYQRGLAQFSNQQKHAAVSDFTNAINLSPKYIEAYLSRGDAHSELGN 529
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+A +VL I+ + S AY RG G + AIKD + + +D N
Sbjct: 530 KLEATADYNKVLQINPKSSIAYVRRGAHRFSFGDVQGAIKDYTQAIKLDSKN 581
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+RG + +G A++DL++A+E P +A + RG ++ ++ A D S ++L+
Sbjct: 315 QRGVGKYEIGNYSGAVKDLTQAIELNPKNALAYNRRGDAFYRLGEYQKAQADSSKAIQLN 374
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQFYQDLANSEKALE 572
+ +AY G +G+Y A + KAI L+ RN +G Q + + + A
Sbjct: 375 PRDANAYYDRGFTFYELGKYPAAIADYTKAITLNSRNAYAYYGRGIARVQ-MKDHQGAFG 433
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ + + +++AY RG++ L Q + AI+DL + + ++P++ + Y R
Sbjct: 434 DFSKAIALKSNYTEAYLQRGIIRRRLKQKQAAIQDLDAAIELNPNDAKAYYQRG 487
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+++RG+ ++ +++ AV+DL+ ++L+ +N AY G A +GEY+KA+ KAIQ
Sbjct: 313 IYQRGVGKYEIGNYSGAVKDLTQAIELNPKNALAYNRRGDAFYRLGEYQKAQADSSKAIQ 372
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L+ A+ + +L A+ + + ++ R + AY+ RG+ + H+ A
Sbjct: 373 LNPRDANAYYDRGFTFYELGKYPAAIADYTKAITLNSRNAYAYYGRGIARVQMKDHQGAF 432
Query: 606 KDLSSGLGIDPSNIECLYLR 625
D S + + SN YL+
Sbjct: 433 GDFSKAIALK-SNYTEAYLQ 451
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
++ LSRG A G A + ++++L+ +P A + RG R +++ AI D+T+
Sbjct: 514 IEAYLSRGDAHSELGNKLEATADYNKVLQINPKSSIAYVRRGAHRFSFGDVQGAIKDYTQ 573
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ + A+ RG G A +D S+A++ P+ A + RG++ K +
Sbjct: 574 AIKLDSKNAAAYNNRGNVHLERGNQKAASEDYSQAIKVNPSYALAYYNRGLIKAKQGNRA 633
Query: 501 AAVEDLSACVKL--DKENKSAY 520
+A+ D KL K NK Y
Sbjct: 634 SAIGDFQQAAKLFEKKGNKEGY 655
>gi|428302097|ref|YP_007140403.1| hypothetical protein Cal6303_5553 [Calothrix sp. PCC 6303]
gi|428238641|gb|AFZ04431.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 211
Score = 94.7 bits (234), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 11/192 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + G AI F+Q +K +P Y EA RG AR + + AI+D+T+AI+ N
Sbjct: 27 NRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYNNRGFARYELGDKQGAITDYTQAIKIN 86
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG AR+ LG+ A+ D ++A++ PN A+ + RG+V K D A+ D
Sbjct: 87 PNDAEAYSNRGIARSELGDKQGALADFNQAIKINPNDAEAYNNRGVVRSKLGDKQGAITD 146
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ AY G+ S +G+ + A + KA G L + D A
Sbjct: 147 YTQAIKINPNLAQAYNNRGVVRSELGDQQGAIQDFQKA-----------GELLKQQGDNA 195
Query: 566 NSEKALECLQQV 577
E+ ++ ++Q+
Sbjct: 196 KYERVMKLIEQI 207
Score = 91.7 bits (226), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 97/177 (54%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+D+ +AI+ NP+ A+ RG R+ LG+ AI D ++A++ PN A+ + RG
Sbjct: 5 QGAIADYNQAIKINPNLDVAYYNRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYNNRGF 64
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ D A+ D + +K++ + AY+ G+A S +G+ + A +AI+++ N
Sbjct: 65 ARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKINPNDA 124
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
EA+ + L + + A+ Q + I+ ++AY+ RG++ LG + AI+D
Sbjct: 125 EAYNNRGVVRSKLGDKQGAITDYTQAIKINPNLAQAYNNRGVVRSELGDQQGAIQDF 181
Score = 90.9 bits (224), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/182 (29%), Positives = 97/182 (53%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G AI+ ++Q +K +P A RG+ R+ + + AI DF +AI+ NP+ EA+
Sbjct: 2 GDKQGAIADYNQAIKINPNLDVAYYNRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYNN 61
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG AR LG+ AI D ++A++ PN A+ RGI + D A+ D + +K++
Sbjct: 62 RGFARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKINP 121
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY G+ S +G+ + A + +AI+++ N +A+ + +L + + A++
Sbjct: 122 NDAEAYNNRGVVRSKLGDKQGAITDYTQAIKINPNLAQAYNNRGVVRSELGDQQGAIQDF 181
Query: 575 QQ 576
Q+
Sbjct: 182 QK 183
Score = 62.8 bits (151), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 85/178 (47%)
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
+G+ AI D ++A++ PN + RG D A+ D + +K++ AY
Sbjct: 1 MGDKQGAIADYNQAIKINPNLDVAYYNRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYN 60
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G A +G+ + A + +AI+++ N EA+ + +L + + AL Q + I+
Sbjct: 61 NRGFARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKIN 120
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++AY+ RG++ LG + AI D + + I+P+ + R +G+ + A+
Sbjct: 121 PNDAEAYNNRGVVRSKLGDKQGAITDYTQAIKINPNLAQAYNNRGVVRSELGDQQGAI 178
Score = 39.7 bits (91), Expect = 4.5, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAIT----ARIELA-KLCSLRNWSKAIRILDSLL 63
+RY L I + + ++++ A A + AR EL K +L ++++AI+I +
Sbjct: 65 ARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKI-NPND 123
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
A++Y NR S+L + I D +A++++P L QAY +G S LG ++ A+
Sbjct: 124 AEAYN-----NRGVVRSKLGDKQGAITDYTQAIKINPNLAQAYNNRGVVRSELGDQQGAI 178
Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDR 157
++K E L Q D ++ + +L+ + R
Sbjct: 179 QDFQKAGE-LLKQQGDNAKYERVMKLIEQIQNLR 211
>gi|354567785|ref|ZP_08986953.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353542243|gb|EHC11707.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 310
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
++ +F +G+ + ++ AI+ D L+ P YPEA +G A E AI+
Sbjct: 10 NLEAEFFFQQGLRRNRVQEFEVAIANLDTALRCKPDYPEAWFQKGFALGSLGRHEDAIAC 69
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F E ++ + W R A L EA+ + +A+EF PN+A I H RG+ +
Sbjct: 70 FDEMLKLRSNDSWVWHNRAIALGKLERHQEALDNFDRAIEFNPNAATIWHNRGLTLCDLQ 129
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ + C+KL + A+ G A + Y++A ++ +AI+ + + AW +
Sbjct: 130 QYQQAIVSFNQCLKLQPDAYWAWNNKGNAQRELRRYEEALNSYDRAIEFHVDNVMAWFNR 189
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ + +KA++ + L I + KA+ +G+ + + +AI + + P+
Sbjct: 190 GVTLNEWKHYQKAIKSFDRTLSIQPNYYKAWLNKGIAWEHIENYDEAIASYNQAAKLQPN 249
Query: 618 NIECLYLRASCY 629
+ Y A CY
Sbjct: 250 DPVIWYNTARCY 261
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C + K +S +R IA ++ A+ FD+ ++ +P RG
Sbjct: 69 CFDEMLKLRSNDSWVWHNRAIALGKLERHQEALDNFDRAIEFNPNAATIWHNRGLTLCDL 128
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + AI F + ++ P A AW +G A+ L EA+ +A+EF ++
Sbjct: 129 QQYQQAIVSFNQCLKLQPDAYWAWNNKGNAQRELRRYEEALNSYDRAIEFHVDNVMAWFN 188
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG+ ++K + A++ + + A+ G+A I Y +A ++ +A +L
Sbjct: 189 RGVTLNEWKHYQKAIKSFDRTLSIQPNYYKAWLNKGIAWEHIENYDEAIASYNQAAKLQP 248
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVL 578
N W + + Y N A+ L+Q +
Sbjct: 249 NDPVIWYNTARCYAQKHNIPVAVANLEQAI 278
>gi|428210653|ref|YP_007083797.1| hypothetical protein Oscil6304_0120 [Oscillatoria acuminata PCC
6304]
gi|427999034|gb|AFY79877.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
Length = 995
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 1/254 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Q G + A++ +++ ++ YP+A RG A+ + E AI+ F EAI
Sbjct: 67 RGKEQFYRGNFTDALASWNEAIRLKRDYPDAYYLRGVAQGQLGQKEDAIASFNEAIHFKR 126
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG A+ LG++ +AI ++A+ +PN D + RG+V + A+
Sbjct: 127 DFPDAYYNRGVAQGQLGQNKDAIASFNEAICLKPNFPDAYYNRGVVQGQLGQKEDAIASF 186
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD-LA 565
+ + L AY GL S +G+Y+ A + +AI+L +F +A+ H D L
Sbjct: 187 NEAICLKPNFSDAYYLRGLTQSQLGQYEDAIASFNEAIRLKPDFPDAYFHRGIVLCDHLK 246
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E A+ + + F AY RG+ LGQ++ AI + + + P + R
Sbjct: 247 QYEDAIASFNEAIRFKSDFDTAYCNRGVAQRNLGQYEDAIASFNEAIRLKPDFSYAYFKR 306
Query: 626 ASCYHAIGEYREAV 639
+ +Y +A+
Sbjct: 307 GVAQSKLRQYEDAI 320
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+AQ G+ AI+ F++ + +P+A RG A+ + + AI+ F EAI P
Sbjct: 101 RGVAQGQLGQKEDAIASFNEAIHFKRDFPDAYYNRGVAQGQLGQNKDAIASFNEAICLKP 160
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG + LG+ +AI ++A+ +PN +D + RG+ + + A+
Sbjct: 161 NFPDAYYNRGVVQGQLGQKEDAIASFNEAICLKPNFSDAYYLRGLTQSQLGQYEDAIASF 220
Query: 507 SACVKLDKENKSAYTYLGLAL-SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + AY + G+ L + +Y+ A + +AI+ +F A+ + ++L
Sbjct: 221 NEAIRLKPDFPDAYFHRGIVLCDHLKQYEDAIASFNEAIRFKSDFDTAYCNRGVAQRNLG 280
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
E A+ + + + FS AY RG+ L Q++ AI SGL +
Sbjct: 281 QYEDAIASFNEAIRLKPDFSYAYFKRGVAQSKLRQYEDAIASFDSGLTL 329
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 35/210 (16%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+AQ G+ AI+ F++ + P +P+A RG + + E AI+ F EA
Sbjct: 130 DAYYNRGVAQGQLGQNKDAIASFNEAICLKPNFPDAYYNRGVVQGQLGQKEDAIASFNEA 189
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV--------- 492
I P+ +A+ RG ++ LG+ +AI ++A+ +P+ D RGIV
Sbjct: 190 ICLKPNFSDAYYLRGLTQSQLGQYEDAIASFNEAIRLKPDFPDAYFHRGIVLCDHLKQYE 249
Query: 493 --------NFKFK-DFNAA-----------------VEDLSACVKLDKENKSAYTYLGLA 526
+FK DF+ A + + ++L + AY G+A
Sbjct: 250 DAIASFNEAIRFKSDFDTAYCNRGVAQRNLGQYEDAIASFNEAIRLKPDFSYAYFKRGVA 309
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
S + +Y+ A + + L R+ + WG+
Sbjct: 310 QSKLRQYEDAIASFDSGLTLKRDAWQDWGN 339
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 78/159 (49%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ A+ L++RG F +F A+ + ++L ++ AY G+A +G+ + A +
Sbjct: 59 DEAEELYQRGKEQFYRGNFTDALASWNEAIRLKRDYPDAYYLRGVAQGQLGQKEDAIASF 118
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI R+F +A+ + L ++ A+ + + + F AY+ RG++ LGQ
Sbjct: 119 NEAIHFKRDFPDAYYNRGVAQGQLGQNKDAIASFNEAICLKPNFPDAYYNRGVVQGQLGQ 178
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI + + + P+ + YLR +G+Y +A+
Sbjct: 179 KEDAIASFNEAICLKPNFSDAYYLRGLTQSQLGQYEDAI 217
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+RG+ + G +A+ ++A+ + + D + RG+ + A+ + +
Sbjct: 66 QRGKEQFYRGNFTDALASWNEAIRLKRDYPDAYYLRGVAQGQLGQKEDAIASFNEAIHFK 125
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ AY G+A +G+ K A + +AI L NF +A+ + L E A+
Sbjct: 126 RDFPDAYYNRGVAQGQLGQNKDAIASFNEAICLKPNFPDAYYNRGVVQGQLGQKEDAIAS 185
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS--CYH- 630
+ + + FS AY+LRGL LGQ++ AI + + + P + + R C H
Sbjct: 186 FNEAICLKPNFSDAYYLRGLTQSQLGQYEDAIASFNEAIRLKPDFPDAYFHRGIVLCDHL 245
Query: 631 -----AIGEYREAV 639
AI + EA+
Sbjct: 246 KQYEDAIASFNEAI 259
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+AQ N G+Y AI+ F++ ++ P + A RG A++ R+ E AI+ F +
Sbjct: 271 NRGVAQRNLGQYEDAIASFNEAIRLKPDFSYAYFKRGVAQSKLRQYEDAIASFDSGLTLK 330
Query: 446 PSAGEAWKRRGQARAAL 462
A + W RG A L
Sbjct: 331 RDAWQDWGNRGDAAGML 347
>gi|91774230|ref|YP_566922.1| tetratricopeptide protein [Methanococcoides burtonii DSM 6242]
gi|91713245|gb|ABE53172.1| Tetratricopeptide repeat protein [Methanococcoides burtonii DSM
6242]
Length = 573
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 3/268 (1%)
Query: 375 KSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+ IS DF + ++G A N +Y AI +D+ ++ DP + +G A +
Sbjct: 235 KAIEISTDFDMYWNNKGNALCNLERYDEAIECYDKAIEIDPDFSSYCNNKGDALCNLEKY 294
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI + +AI+ +P +G A L EAI+ KA+E + + +G
Sbjct: 295 DEAIECYDKAIEIDPDFSSYCNNKGDALCNLERYNEAIECYDKAIEMSTDFDMYWNNKGN 354
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+F + +N A+E +++D + S G AL ++ +Y +A E + KAI++D +F
Sbjct: 355 AHFNLEKYNKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKYDEAIECYDKAIEIDPDFS 414
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
WG+ +L ++A+EC + L I F + +G L L ++ +AI+
Sbjct: 415 SYWGNKGDALCNLERHDEAIECYDKALEISTDFGMYCNNKGNALCNLERYNEAIECYDKT 474
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P C + + + + Y EA+
Sbjct: 475 LEIYPDFSSCWNNKGNALYYLERYNEAI 502
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 113/248 (45%), Gaps = 1/248 (0%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYAS-AISIFDQILKEDPMYPEALIGRGTARAFQ 428
+ + + K+ +++F +N K + + + + L+ +P +G A
Sbjct: 164 INSLERRKNTNLEFDSDAATIFLNIEKIVNLELDYYTKALEHNPDNDSYWSNKGDALCNL 223
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + AI + +AI+ + W +G A L EAI+ KA+E +P+ + +
Sbjct: 224 EKYDEAIGCYDKAIEISTDFDMYWNNKGNALCNLERYDEAIECYDKAIEIDPDFSSYCNN 283
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G + ++ A+E +++D + S G AL ++ Y +A E + KAI++
Sbjct: 284 KGDALCNLEKYDEAIECYDKAIEIDPDFSSYCNNKGDALCNLERYNEAIECYDKAIEMST 343
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+F W + + +L KA+EC + + ID FS + +G L L ++ +AI+
Sbjct: 344 DFDMYWNNKGNAHFNLEKYNKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKYDEAIECY 403
Query: 609 SSGLGIDP 616
+ IDP
Sbjct: 404 DKAIEIDP 411
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 3/210 (1%)
Query: 375 KSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+ +S DF + ++G A N KY AI +D+ ++ DP + +G A +
Sbjct: 337 KAIEMSTDFDMYWNNKGNAHFNLEKYNKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKY 396
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI + +AI+ +P W +G A L EAI+ KALE + + +G
Sbjct: 397 DEAIECYDKAIEIDPDFSSYWGNKGDALCNLERHDEAIECYDKALEISTDFGMYCNNKGN 456
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ +N A+E +++ + S + G AL + Y +A E + KA+++D N
Sbjct: 457 ALCNLERYNEAIECYDKTLEIYPDFSSCWNNKGNALYYLERYNEAIECYDKALEMDPNDD 516
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYID 581
+AW + N E+AL L + + +D
Sbjct: 517 DAWYASASIFSKNGNKEEALYRLAKSIELD 546
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 5/247 (2%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +D S +G A N +Y AI +D+ ++ + +G A +
Sbjct: 303 KAIEIDPDFSSYCNNKGDALCNLERYNEAIECYDKAIEMSTDFDMYWNNKGNAHFNLEKY 362
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
AI + +AI+ +P +G A L + EAI+ KA+E +P+ + +G
Sbjct: 363 NKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKYDEAIECYDKAIEIDPDFSSYWGNKGD 422
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + A+E +++ + G AL ++ Y +A E + K +++ +F
Sbjct: 423 ALCNLERHDEAIECYDKALEISTDFGMYCNNKGNALCNLERYNEAIECYDKTLEIYPDFS 482
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
W + L +A+EC + L +D A++ + G ++A+ L+
Sbjct: 483 SCWNNKGNALYYLERYNEAIECYDKALEMDPNDDDAWYASASIFSKNGNKEEALYRLAKS 542
Query: 612 LGIDPSN 618
+ +D S+
Sbjct: 543 IELDDSD 549
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 5/148 (3%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +D S +G A N ++ AI +D+ L+ + +G A
Sbjct: 405 KAIEIDPDFSSYWGNKGDALCNLERHDEAIECYDKALEISTDFGMYCNNKGNALCNLERY 464
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
AI + + ++ P W +G A L EAI+ KALE +PN D +
Sbjct: 465 NEAIECYDKTLEIYPDFSSCWNNKGNALYYLERYNEAIECYDKALEMDPNDDDAWYASAS 524
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ K + A+ L+ ++LD +K++
Sbjct: 525 IFSKNGNKEEALYRLAKSIELDDSDKNS 552
>gi|427420258|ref|ZP_18910441.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
gi|425762971|gb|EKV03824.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
Length = 477
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 4/235 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G+ AISIF+ +++ P Y +A RG A AI DF+ AI
Sbjct: 7 LNQGVDLARRQDCLGAISIFNTVIESLPNYAKAYFNRGCAHYAMGNYAVAIEDFSWAIHL 66
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A+ RG A+ LG + A++D + ++ P S RG++ + ++ AV
Sbjct: 67 TPDYASAYLNRGNAQRKLGHTDAALEDFERGIQLTPLSTRGYCNRGLLRLEVGNYAGAVR 126
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQ 562
D ++L Y + G+A G++K+A +A+ L+ + + + L FYQ
Sbjct: 127 DFDYALRLQPHFPRGYLWRGVAWLRCGDFKQAINDLNRALALNPHCAKTYNQRGLAYFYQ 186
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ ++AL Q + +DK + AY+ R L +G + A+ D L ++P+
Sbjct: 187 --VDYKQALADFNQAVDLDKDLADAYNNRAALRTEMGDYAGAMADYCKALHLNPA 239
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 23/261 (8%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+A + G + AI+ ++ L +P + RG A +Q + + A++DF +A+
Sbjct: 143 LWRGVAWLRCGDFKQAINDLNRALALNPHCAKTYNQRGLAYFYQVDYKQALADFNQAVDL 202
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD-------------------- 484
+ +A+ R R +G+ A+ D KAL P +
Sbjct: 203 DKDLADAYNNRAALRTEMGDYAGAMADYCKALHLNPALPEAYPQTLKQLHNALQDYPSPG 262
Query: 485 ---ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+L+ RG D + A+ D + ++LD + Y GL + Y+ A
Sbjct: 263 KLALLNNRGNTRATLGDSSGALNDYTEALRLDPNHAYVYNNRGLVRLYLHNYEMAATDFS 322
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI+L+ F EA+ + Q L N E AL+ + Q L ++ + AY RG + L +
Sbjct: 323 EAIRLNPQFAEAFSNRGGIRQHLGNLEGALQDINQALDLNPSLANAYVHRGRIHVDLKNY 382
Query: 602 KKAIKDLSSGLGIDPSNIECL 622
KA+ D + L + P L
Sbjct: 383 MKAMADFNKALSLQPDAAHTL 403
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 117/278 (42%), Gaps = 23/278 (8%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG AQ G +A+ F++ ++ P+ RG R A+ DF A++
Sbjct: 75 LNRGNAQRKLGHTDAALEDFERGIQLTPLSTRGYCNRGLLRLEVGNYAGAVRDFDYALRL 134
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + RG A G+ +AI DL++AL P+ A ++RG+ F D+ A+
Sbjct: 135 QPHFPRGYLWRGVAWLRCGDFKQAINDLNRALALNPHCAKTYNQRGLAYFYQVDYKQALA 194
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-LTQFY-- 561
D + V LDK+ AY + +G+Y A + KA+ L+ EA+ L Q +
Sbjct: 195 DFNQAVDLDKDLADAYNNRAALRTEMGDYAGAMADYCKALHLNPALPEAYPQTLKQLHNA 254
Query: 562 -QD-------------------LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
QD L +S AL + L +D + Y+ RGL+ L +
Sbjct: 255 LQDYPSPGKLALLNNRGNTRATLGDSSGALNDYTEALRLDPNHAYVYNNRGLVRLYLHNY 314
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ A D S + ++P E R +G A+
Sbjct: 315 EMAATDFSEAIRLNPQFAEAFSNRGGIRQHLGNLEGAL 352
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 23/253 (9%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + Y A++ F+Q + D +A R R + A++D+ +A+ NP
Sbjct: 179 RGLAYFYQVDYKQALADFNQAVDLDKDLADAYNNRAALRTEMGDYAGAMADYCKALHLNP 238
Query: 447 SAGEAWKR-----------------------RGQARAALGESVEAIQDLSKALEFEPNSA 483
+ EA+ + RG RA LG+S A+ D ++AL +PN A
Sbjct: 239 ALPEAYPQTLKQLHNALQDYPSPGKLALLNNRGNTRATLGDSSGALNDYTEALRLDPNHA 298
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
+ + RG+V ++ A D S ++L+ + A++ G +G + A + +A
Sbjct: 299 YVYNNRGLVRLYLHNYEMAATDFSEAIRLNPQFAEAFSNRGGIRQHLGNLEGALQDINQA 358
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
+ L+ + A+ H + + DL N KA+ + L + + + R +L L +
Sbjct: 359 LDLNPSLANAYVHRGRIHVDLKNYMKAMADFNKALSLQPDAAHTLNERSVLRFRLNDTEG 418
Query: 604 AIKDLSSGLGIDP 616
A+ D++ L + P
Sbjct: 419 ALADVNRALELQP 431
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 72/135 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++ Y A + F + ++ +P + EA RG R LE A+ D +A+ N
Sbjct: 303 NRGLVRLYLHNYEMAATDFSEAIRLNPQFAEAFSNRGGIRQHLGNLEGALQDINQALDLN 362
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS A+ RG+ L ++A+ D +KAL +P++A L+ER ++ F+ D A+ D
Sbjct: 363 PSLANAYVHRGRIHVDLKNYMKAMADFNKALSLQPDAAHTLNERSVLRFRLNDTEGALAD 422
Query: 506 LSACVKLDKENKSAY 520
++ ++L + AY
Sbjct: 423 VNRALELQPQFSDAY 437
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 34/229 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G + A++ + + L+ DP + RG R + E A +DF+EAI+ N
Sbjct: 269 NRGNTRATLGDSSGALNDYTEALRLDPNHAYVYNNRGLVRLYLHNYEMAATDFSEAIRLN 328
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ RG R LG A+QD+++AL+ P+ A+ RG ++ K++ A+ D
Sbjct: 329 PQFAEAFSNRGGIRQHLGNLEGALQDINQALDLNPSLANAYVHRGRIHVDLKNYMKAMAD 388
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L + +A+T L S+ ++ L
Sbjct: 389 FNKALSLQPD--AAHT---LNERSVLRFR-----------------------------LN 414
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
++E AL + + L + +FS AY R L+ G A DL S + +
Sbjct: 415 DTEGALADVNRALELQPQFSDAYINRSLIRFDRGDRSGAFSDLDSVMSL 463
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
M + L+ +G A +++ AIS F I+S P+ +A+ RG A A+G AI+D
Sbjct: 1 MTAKDLLNQGVDLARRQDCLGAISIFNTVIESLPNYAKAYFNRGCAHYAMGNYAVAIEDF 60
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
S A+ P+ A RG K +AA+ED ++L + Y GL +G
Sbjct: 61 SWAIHLTPDYASAYLNRGNAQRKLGHTDAALEDFERGIQLTPLSTRGYCNRGLLRLEVGN 120
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y A A++L +F + + + ++A+ L + L ++ +K Y+ RG
Sbjct: 121 YAGAVRDFDYALRLQPHFPRGYLWRGVAWLRCGDFKQAINDLNRALALNPHCAKTYNQRG 180
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L +K+A+ D + + +D + RA+ +G+Y A+
Sbjct: 181 LAYFYQVDYKQALADFNQAVDLDKDLADAYNNRAALRTEMGDYAGAM 227
>gi|410099837|ref|ZP_11294805.1| hypothetical protein HMPREF1076_03983 [Parabacteroides goldsteinii
CL02T12C30]
gi|409217670|gb|EKN10645.1| hypothetical protein HMPREF1076_03983 [Parabacteroides goldsteinii
CL02T12C30]
Length = 701
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 124/272 (45%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F ++ S I+ D L+ G + Y +I F+Q++K P E R A+
Sbjct: 2 FVAYSLAMSAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKAKPWIAEPYFYRAVAKIN 61
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L
Sbjct: 62 LDDYKGAEEDCTLCLQRNPFLVQAYYARGIARQSQEKYAEAIADYDKGLEFKPEDRQMLV 121
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ + N + KD++ A + +K + Y G + G+ KA + KAI++D
Sbjct: 122 NKAVANIQRKDYDDAEKTFDVLMKAHPKYSMNYLTRGAMYTEKGDTVKALADYNKAIEMD 181
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ ++G+ + + AL L + + ++ R S Y RGL+ + + + A+ D
Sbjct: 182 PYYAPSYGNRAILLYQTNDLKGALADLNEAIRLNTRESGYYINRGLVRYQMNDLRGAMDD 241
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+G+D +N+ + R + +G+ A+
Sbjct: 242 YDQVIGMDKNNLIARFNRGLLRYQVGDNNRAI 273
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 118/243 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KYA AI+ +D+ L+ P + L+ + A +++ + A F ++++
Sbjct: 88 ARGIARQSQEKYAEAIADYDKGLEFKPEDRQMLVNKAVANIQRKDYDDAEKTFDVLMKAH 147
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++V+A+ D +KA+E +P A R I+ ++ D A+ D
Sbjct: 148 PKYSMNYLTRGAMYTEKGDTVKALADYNKAIEMDPYYAPSYGNRAILLYQTNDLKGALAD 207
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ ++L+ Y GL + + + A + + + I +D+N L A + +
Sbjct: 208 LNEAIRLNTRESGYYINRGLVRYQMNDLRGAMDDYDQVIGMDKNNLIARFNRGLLRYQVG 267
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++ +A+E V+ + AY+ R LL G ++ +++D LG P+ Y R
Sbjct: 268 DNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGSVQDFDVVLGQYPNFTPGYYSR 327
Query: 626 ASC 628
+
Sbjct: 328 SEA 330
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D +++ +P + A RG R QR+ AAI D+ EAI+ +P EA+ RG A +LG
Sbjct: 612 YDMVIRLNPGFVYAYFNRGNLRCVQRDFRAAIQDYDEAIKRDPDFAEAYFNRGLAHLSLG 671
Query: 464 ESVEAIQDLSKALEF 478
++ + I DLSKA E
Sbjct: 672 DANQGIADLSKAGEL 686
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 23/202 (11%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A+I+D++ I++ P +AW R + + EAI+D +K +E +P R +V
Sbjct: 490 ASINDYSAKIEAQPGNADAWFGRAVDYMLVQDFTEAIKDFNKVIELDPTYTMAYFNRAVV 549
Query: 493 NFKFKDFN----AAVEDLSACV-----KLDKENKSAYTYLGLALSSIGEYKKAEEAHL-- 541
+K ++ +DLSA + K+ + + + + +KA E L
Sbjct: 550 RYKQLVYDMSQTTTTDDLSASMGSMNFKMGQSPTQPKAPSDPRSAEVKDKRKAYEHELIT 609
Query: 542 ----KAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
I+L+ F+ A+ G+L +D A++ + + D F++AY RGL
Sbjct: 610 RDYDMVIRLNPGFVYAYFNRGNLRCVQRDF---RAAIQDYDEAIKRDPDFAEAYFNRGLA 666
Query: 595 LHGLGQHKKAIKDLSSG--LGI 614
LG + I DLS LGI
Sbjct: 667 HLSLGDANQGIADLSKAGELGI 688
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+A++ EL D+ I+ NP A+ RG R + AIQD +A++ +P+ A+
Sbjct: 601 KAYEHEL--ITRDYDMVIRLNPGFVYAYFNRGNLRCVQRDFRAAIQDYDEAIKRDPDFAE 658
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG+ + D N + DLS +L
Sbjct: 659 AYFNRGLAHLSLGDANQGIADLSKAGEL 686
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 52/135 (38%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A+ +DQ++ D A RG R + AI DF I
Sbjct: 221 YYINRGLVRYQMNDLRGAMDDYDQVIGMDKNNLIARFNRGLLRYQVGDNNRAIEDFDVVI 280
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ ++QD L PN + R K D A
Sbjct: 281 QQEPDNYMAYYNRALLRFETGDYRGSVQDFDVVLGQYPNFTPGYYSRSEAKRKMNDQVGA 340
Query: 503 VEDLSACVKLDKENK 517
D ++++ +K
Sbjct: 341 DRDYWTAIEMENNSK 355
>gi|423452169|ref|ZP_17429022.1| hypothetical protein IEE_00913 [Bacillus cereus BAG5X1-1]
gi|401142240|gb|EJQ49789.1| hypothetical protein IEE_00913 [Bacillus cereus BAG5X1-1]
Length = 918
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 119/240 (49%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++++ ++ D Y A I RG Q E E AI D+T+ I+ + + + R A
Sbjct: 572 AIEMYNKAIELDGNYLSAYINRGHINRRQGEYEDAILDYTKVIELDGNKATFYDHRAYAY 631
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L + EAI+D +KA+E + N A + RG + + + A+ + + ++LD
Sbjct: 632 IQLEKYEEAIEDCNKAIELDGNKAMFYNRRGNIYSQLGKYGKAIGECNKAIELDGNRAVF 691
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y S +G+Y++A E KAI LD N A+ Y EKA+E ++V+
Sbjct: 692 YCNRAFVYSQLGKYEEAIEECKKAIGLDGNNAAAYSCRAYVYNQSGKYEKAIEDCKKVIE 751
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+D+ + AY R + L ++++AI+D + + +D S R Y+ + +Y+EA+
Sbjct: 752 LDENNASAYSNRSYAYNQLEKYEEAIEDCNKAIKLDGSRAVFYNNRGYAYNQLEKYKEAI 811
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 125/264 (47%), Gaps = 9/264 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG +G+Y AI + ++++ D R A + E AI D +AI+
Sbjct: 591 INRGHINRRQGEYEDAILDYTKVIELDGNKATFYDHRAYAYIQLEKYEEAIEDCNKAIEL 650
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + + RRG + LG+ +AI + +KA+E + N A R V + + A+E
Sbjct: 651 DGNKAMFYNRRGNIYSQLGKYGKAIGECNKAIELDGNRAVFYCNRAFVYSQLGKYEEAIE 710
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + LD N +AY+ + G+Y+KA E K I+LD N A+ + + Y L
Sbjct: 711 ECKKAIGLDGNNAAAYSCRAYVYNQSGKYEKAIEDCKKVIELDENNASAYSNRSYAYNQL 770
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC--- 621
E+A+E + + +D + Y+ RG + L ++K+AI+D + + + ++
Sbjct: 771 EKYEEAIEDCNKAIKLDGSRAVFYNNRGYAYNQLEKYKEAIEDCKKAIELIENKVDVHSK 830
Query: 622 ------LYLRASCYHAIGEYREAV 639
R+ Y+ + +Y+EA+
Sbjct: 831 RIKGNAYSNRSHAYNQLEKYKEAI 854
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI ++++ D A R A + E AI D +AI+ + S +
Sbjct: 737 GKYEKAIEDCKKVIELDENNASAYSNRSYAYNQLEKYEEAIEDCNKAIKLDGSRAVFYNN 796
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF---------KFKDFNAAVED 505
RG A L + EAI+D KA+E N D+ +R N + + + A+ED
Sbjct: 797 RGYAYNQLEKYKEAIEDCKKAIELIENKVDVHSKRIKGNAYSNRSHAYNQLEKYKEAIED 856
Query: 506 LSACVKLDKENKSAYTY-LGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++L + Y G A + +Y+KAE+ ++KAI+++ ++ EA
Sbjct: 857 CKKAIELGTDKTEVLYYNRGYAYEKLKDYQKAEKDYIKAIEVNPDYEEA 905
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
CNRAF YSQL ++ I +C KA+ LD AY + ++ G+ E+A+
Sbjct: 693 CNRAFVYSQLGKYEEAIEECKKAIGLDGNNAAAYSCRAYVYNQSGKYEKAIE-------- 744
Query: 133 ALHQSADLKQFLELEELLTAAKQDRS 158
D K+ +EL+E +A +RS
Sbjct: 745 ------DCKKVIELDENNASAYSNRS 764
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR++ Y+QLE ++ I DC+KA++LD + Y +G A++ L + +EA+ +K E
Sbjct: 762 NRSYAYNQLEKYEEAIEDCNKAIKLDGSRAVFYNNRGYAYNQLEKYKEAIEDCKKAIE 819
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ +++K I LD A Y+ +RA+ Y QLE ++ I DC+KA++LD Y
Sbjct: 606 AILDYTKVIE-LDGNKATFYD-----HRAYAYIQLEKYEEAIEDCNKAIELDGNKAMFYN 659
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G +S LG+ +A+ K E
Sbjct: 660 RRGNIYSQLGKYGKAIGECNKAIE 683
>gi|428209080|ref|YP_007093433.1| hypothetical protein Chro_4160 [Chroococcidiopsis thermalis PCC
7203]
gi|428011001|gb|AFY89564.1| Tetratricopeptide TPR_1 repeat-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 588
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 2/237 (0%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R+ KS S DF ++G + + G + AI+ + Q + +P Y +A RG AR Q +
Sbjct: 263 RLENPKSAS-DF-FAKGSVERDRGDRSRAIANYTQAIARNPNYADAYYQRGNARYDQGDK 320
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ A++D+ +A++ +P+ A+ +R G EA+ + + PN A H RG
Sbjct: 321 QGALADYDQALKFDPNYANAYYQRAVILYNRGNKQEALSSFDRYITLVPNDAQAYHSRGA 380
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ D +D V+L+ +N AY LA + + + K A + A+ LD ++
Sbjct: 381 IRRSMGDGQGTFDDFDRVVRLEPDNSRAYYNRALARTMLRDSKGALDDFSHALNLDPSWT 440
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + + L + + A++ +V+ I+ + ++A++ RGL+ LG + AI+DL
Sbjct: 441 TVYNNRAILRRRLGDRQGAVDDFSKVISIEPKNAEAHYNRGLVRRDLGDRQGAIEDL 497
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 103/206 (50%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI+++T+AI NP+ +A+ +RG AR G+ A+ D +AL+F+PN A+ ++R ++
Sbjct: 289 AIANYTQAIARNPNYADAYYQRGNARYDQGDKQGALADYDQALKFDPNYANAYYQRAVIL 348
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ + A+ + L + AY G S+G+ + + + ++L+ + A
Sbjct: 349 YNRGNKQEALSSFDRYITLVPNDAQAYHSRGAIRRSMGDGQGTFDDFDRVVRLEPDNSRA 408
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ + L +S+ AL+ L +D ++ Y+ R +L LG + A+ D S +
Sbjct: 409 YYNRALARTMLRDSKGALDDFSHALNLDPSWTTVYNNRAILRRRLGDRQGAVDDFSKVIS 468
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
I+P N E Y R +G+ + A+
Sbjct: 469 IEPKNAEAHYNRGLVRRDLGDRQGAI 494
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG + + G FD++++ +P A R AR R+ + A+ DF+ A+ +
Sbjct: 377 SRGAIRRSMGDGQGTFDDFDRVVRLEPDNSRAYYNRALARTMLRDSKGALDDFSHALNLD 436
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS + R R LG+ A+ D SK + EP +A+ + RG+V D A+ED
Sbjct: 437 PSWTTVYNNRAILRRRLGDRQGAVDDFSKVISIEPKNAEAHYNRGLVRRDLGDRQGAIED 496
Query: 506 LSACVKLDKENKSAYTY 522
L + ++ + Y
Sbjct: 497 LQLAANIFQQKNDSTNY 513
>gi|434402863|ref|YP_007145748.1| hypothetical protein Cylst_0741 [Cylindrospermum stagnale PCC 7417]
gi|428257118|gb|AFZ23068.1| hypothetical protein Cylst_0741 [Cylindrospermum stagnale PCC 7417]
Length = 907
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 111/252 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A +Y A+ +Q L P Y AL RG A +E + A +DF ++I +P
Sbjct: 48 GLASFRLERYQEAVKYLNQALVIQPDYILALARRGMAYKQLKETQLADADFEQSIALSPQ 107
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E W+ RG A L EAI K +EF+P+ + RGI + + A+
Sbjct: 108 NAEDWRGRGLALDELERHEEAIASYDKVIEFKPDDDTAWYNRGIALYALGRYEEAITSYD 167
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++ ++ A+ G+ L + Y+KA ++ KAI+ N AW + L
Sbjct: 168 KAIEFKPDDNIAWGSRGIVLYELERYEKAIASYDKAIEFKPNDDTAWNNRGNALYRLGRY 227
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E+A+ + + A++ RG L LG+ K+AI + P+ E + R
Sbjct: 228 EEAITSYDKAIEFKPDDDTAWNNRGNALFHLGRDKEAIASFDKAIEFKPNKDEAWFNRGK 287
Query: 628 CYHAIGEYREAV 639
+ +G Y EA+
Sbjct: 288 ALNDLGRYEEAI 299
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 100/221 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G+Y AI+ +D+ ++ P A RG E AI+ + +AI+
Sbjct: 148 NRGIALYALGRYEEAITSYDKAIEFKPDDNIAWGSRGIVLYELERYEKAIASYDKAIEFK 207
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW RG A LG EAI KA+EF+P+ + RG F A+
Sbjct: 208 PNDDTAWNNRGNALYRLGRYEEAITSYDKAIEFKPDDDTAWNNRGNALFHLGRDKEAIAS 267
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ A+ G AL+ +G Y++A + KAI+ AW DL
Sbjct: 268 FDKAIEFKPNKDEAWFNRGKALNDLGRYEEAIASFDKAIEFKPGDHYAWNGQGFVLDDLG 327
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E+A+ + + + +A+ RG+ L LG+ +KAIK
Sbjct: 328 RYEEAIASYDKAIEFKPDYHEAWFNRGIALFHLGREEKAIK 368
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 7/276 (2%)
Query: 369 CVTRISKSKSISVDFRLS---RGIA--QVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
V ++++ I D+ L+ RG+A Q+ E + A A F+Q + P E GRG
Sbjct: 60 AVKYLNQALVIQPDYILALARRGMAYKQLKETQLADAD--FEQSIALSPQNAEDWRGRGL 117
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
A E AI+ + + I+ P AW RG A ALG EAI KA+EF+P+
Sbjct: 118 ALDELERHEEAIASYDKVIEFKPDDDTAWYNRGIALYALGRYEEAITSYDKAIEFKPDDN 177
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
RGIV ++ + + A+ ++ + +A+ G AL +G Y++A ++ KA
Sbjct: 178 IAWGSRGIVLYELERYEKAIASYDKAIEFKPNDDTAWNNRGNALYRLGRYEEAITSYDKA 237
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
I+ + AW + L ++A+ + + +A+ RG L+ LG++++
Sbjct: 238 IEFKPDDDTAWNNRGNALFHLGRDKEAIASFDKAIEFKPNKDEAWFNRGKALNDLGRYEE 297
Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AI + P + + +G Y EA+
Sbjct: 298 AIASFDKAIEFKPGDHYAWNGQGFVLDDLGRYEEAI 333
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 1/267 (0%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ S + D+R RG+A ++ AI+ +D++++ P A RG A E
Sbjct: 102 IALSPQNAEDWR-GRGLALDELERHEEAIASYDKVIEFKPDDDTAWYNRGIALYALGRYE 160
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+ + +AI+ P AW RG L +AI KA+EF+PN + RG
Sbjct: 161 EAITSYDKAIEFKPDDNIAWGSRGIVLYELERYEKAIASYDKAIEFKPNDDTAWNNRGNA 220
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++ + A+ ++ ++ +A+ G AL +G K+A + KAI+ N E
Sbjct: 221 LYRLGRYEEAITSYDKAIEFKPDDDTAWNNRGNALFHLGRDKEAIASFDKAIEFKPNKDE 280
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
AW + + DL E+A+ + + A++ +G +L LG++++AI +
Sbjct: 281 AWFNRGKALNDLGRYEEAIASFDKAIEFKPGDHYAWNGQGFVLDDLGRYEEAIASYDKAI 340
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAV 639
P E + R +G +A+
Sbjct: 341 EFKPDYHEAWFNRGIALFHLGREEKAI 367
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 114/255 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G Q++ G Y +A + F Q + +P P+ G G A + A+ +A+
Sbjct: 11 LQQGNDQLDRGNYQAAFATFQQAVTLEPPNPQVFYGLGLASFRLERYQEAVKYLNQALVI 70
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RRG A L E+ A D +++ P +A+ RG+ + + A+
Sbjct: 71 QPDYILALARRGMAYKQLKETQLADADFEQSIALSPQNAEDWRGRGLALDELERHEEAIA 130
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++ ++ +A+ G+AL ++G Y++A ++ KAI+ + AWG +L
Sbjct: 131 SYDKVIEFKPDDDTAWYNRGIALYALGRYEEAITSYDKAIEFKPDDNIAWGSRGIVLYEL 190
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
EKA+ + + A++ RG L+ LG++++AI + P +
Sbjct: 191 ERYEKAIASYDKAIEFKPNDDTAWNNRGNALYRLGRYEEAITSYDKAIEFKPDDDTAWNN 250
Query: 625 RASCYHAIGEYREAV 639
R + +G +EA+
Sbjct: 251 RGNALFHLGRDKEAI 265
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G+Y AI+ +D+ ++ P A RG A + AI+ F +AI+
Sbjct: 216 NRGNALYRLGRYEEAITSYDKAIEFKPDDDTAWNNRGNALFHLGRDKEAIASFDKAIEFK 275
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EAW RG+A LG EAI KA+EF+P + +G V + A+
Sbjct: 276 PNKDEAWFNRGKALNDLGRYEEAIASFDKAIEFKPGDHYAWNGQGFVLDDLGRYEEAIAS 335
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
++ + A+ G+AL +G +KA ++ L+A
Sbjct: 336 YDKAIEFKPDYHEAWFNRGIALFHLGREEKAIKSWLEA 373
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 70 QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
+D R +LE H+ I DK ++ P A+ +G A ALGR EEA++ ++K
Sbjct: 110 EDWRGRGLALDELERHEEAIASYDKVIEFKPDDDTAWYNRGIALYALGRYEEAITSYDKA 169
Query: 130 YE 131
E
Sbjct: 170 IE 171
>gi|334118012|ref|ZP_08492102.1| serine/threonine protein kinase with TPR repeats [Microcoleus
vaginatus FGP-2]
gi|333459997|gb|EGK88607.1| serine/threonine protein kinase with TPR repeats [Microcoleus
vaginatus FGP-2]
Length = 699
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 118/240 (49%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ FD LK P Y A GRG + E AI+ + +A++ + AW RGQA
Sbjct: 421 AIASFDNALKIQPDYATAWEGRGDVLLDSQRYEEAIASYEKAVEFQSNLYRAWYNRGQAY 480
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L + A++ KA+E + ++ + + G V + A E V+ + +
Sbjct: 481 QKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLEVNKNQEAFEAYEKAVRFQPKFYQS 540
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G+AL + +++A EA+ KA++L ++ +AW +L Y +L E+A+EC + L
Sbjct: 541 WYSKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALD 600
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ + +A++ RG + L +++ AI + + + E Y R + AI Y +A+
Sbjct: 601 LNPKEDQAWYNRGNAQYNLKRYEDAIASYNEAVYVKQDYSEAWYSRGNALVAIKRYEDAI 660
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 120/254 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N ++ A++ +++ + P Y E + ++ + S + +AI+
Sbjct: 339 NRGNTLYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLYKLKKYHESQSAYDKAIELK 398
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A L +S EAI AL+ +P+ A RG V + + A+
Sbjct: 399 PEYLEAWTGRGYALDKLQQSQEAIASFDNALKIQPDYATAWEGRGDVLLDSQRYEEAIAS 458
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+ A+ G A + +Y +A E++ KA+++ + EAW +L + ++
Sbjct: 459 YEKAVEFQSNLYRAWYNRGQAYQKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLEVN 518
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+++A E ++ + +F ++++ +G+ L + +H++A++ + + P + Y
Sbjct: 519 KNQEAFEAYEKAVRFQPKFYQSWYSKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNL 578
Query: 626 ASCYHAIGEYREAV 639
YH + +Y +A+
Sbjct: 579 GWSYHELRKYEQAI 592
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ L +VN+ + A +++ ++ P + ++ +G A R E A+ + +A+
Sbjct: 508 YNLGNVFLEVNKNQ--EAFEAYEKAVRFQPKFYQSWYSKGIALLKMRRHEEAVEAYEKAV 565
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P +AW G + L + +AI+ ++AL+ P + RG + K + A
Sbjct: 566 KLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALDLNPKEDQAWYNRGNAQYNLKRYEDA 625
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + V + ++ A+ G AL +I Y+ A ++ KAI+ ++
Sbjct: 626 IASYNEAVYVKQDYSEAWYSRGNALVAIKRYEDAIASYDKAIRYKPDY 673
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 63/134 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GIA + ++ A+ +++ +K P Y +A G + R+ E AI + A+ N
Sbjct: 543 SKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALDLN 602
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A+ L +AI ++A+ + + ++ + RG K + A+
Sbjct: 603 PKEDQAWYNRGNAQYNLKRYEDAIASYNEAVYVKQDYSEAWYSRGNALVAIKRYEDAIAS 662
Query: 506 LSACVKLDKENKSA 519
++ + ++A
Sbjct: 663 YDKAIRYKPDYRAA 676
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 66/162 (40%)
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F +A L+ RG + F A+ + L + + L + +Y +++
Sbjct: 329 FNSANATDLYNRGNTLYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLYKLKKYHESQ 388
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
A+ KAI+L +LEAW L S++A+ L I ++ A+ RG +L
Sbjct: 389 SAYDKAIELKPEYLEAWTGRGYALDKLQQSQEAIASFDNALKIQPDYATAWEGRGDVLLD 448
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++++AI + + Y R Y + +Y AV
Sbjct: 449 SQRYEEAIASYEKAVEFQSNLYRAWYNRGQAYQKLKQYDRAV 490
>gi|384208546|ref|YP_005594266.1| hypothetical protein Bint_1063 [Brachyspira intermedia PWS/A]
gi|343386196|gb|AEM21686.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 424
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 41/290 (14%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA+ G + AI+ +++ ++ D Y E R + EAA+ D+ + I+ P+
Sbjct: 41 GIAKQALGLFEEAINYYNKGIEVDENYAELYYNRANCESNLGLYEAAVKDYDKVIELVPT 100
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ RG A+ LG EAI+D+ KA+ + N+ D +R + K + A+ED
Sbjct: 101 HSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYK 160
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--------------------- 546
++LD AY +G A SIG Y++A + K I+L
Sbjct: 161 KVLELDDTEVYAYNGIGDAKRSIGLYEEAITYYNKVIELSNGNSSYAYNNRGACKIGLGL 220
Query: 547 ------DRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK----------AYH 589
D N LE + T Y + +E LE ++ + K F K AY+
Sbjct: 221 YNEAIIDINKALEIYDEYTDAYNNRGTAEYNLELYKEAI---KDFDKAIELSPQYFYAYN 277
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG LG ++ AI+D + + I+P I+ Y RA + +G + EAV
Sbjct: 278 NRGNAKSALGLYEDAIEDFNKAISIEPQYIDAYYNRAIAKNNMGLHNEAV 327
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D + R ++ KY AI + ++L+ D A G G A+ E AI+ +
Sbjct: 135 NIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSIGLYEEAITYYN 194
Query: 440 EAIQ-SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+ I+ SN ++ A+ RG + LG EAI D++KALE D + RG + +
Sbjct: 195 KVIELSNGNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDEYTDAYNNRGTAEYNLEL 254
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---- 554
+ A++D ++L + AY G A S++G Y+ A E KAI ++ +++A+
Sbjct: 255 YKEAIKDFDKAIELSPQYFYAYNNRGNAKSALGLYEDAIEDFNKAISIEPQYIDAYYNRA 314
Query: 555 ------------------------GHLTQFYQ------DLANSEKALECLQQVLYIDKRF 584
H+ +Y +LA+ E+A++ +V+ ++ +
Sbjct: 315 IAKNNMGLHNEAVKDYDMVIELDNNHINAYYNRGLSYYNLADYEEAIKNYDRVIELNSKL 374
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ AY+ RG + +G +++A++D + IDP+
Sbjct: 375 ADAYNNRGFAKYSMGLYEEAVRDYDKAIEIDPN 407
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ N Y AI FD+ ++ P Y A RG A++ E AI DF +AI
Sbjct: 244 NRGTAEYNLELYKEAIKDFDKAIELSPQYFYAYNNRGNAKSALGLYEDAIEDFNKAISIE 303
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ R A+ +G EA++D +E + N + + RG+ + D+ A+++
Sbjct: 304 PQYIDAYYNRAIAKNNMGLHNEAVKDYDMVIELDNNHINAYYNRGLSYYNLADYEEAIKN 363
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++L+ + AY G A S+G Y++A + KAI++D N+ +A
Sbjct: 364 YDRVIELNSKLADAYNNRGFAKYSMGLYEEAVRDYDKAIEIDPNYEKA 411
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 131/304 (43%), Gaps = 40/304 (13%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K I VD +R + N G Y +A+ +D++++ P + +A RG A+
Sbjct: 58 NKGIEVDENYAELYYNRANCESNLGLYEAAVKDYDKVIELVPTHSKAYDDRGYAKGNLGY 117
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP---------- 480
E AI D +AI + + +A+ R + + +EAI+D K LE +
Sbjct: 118 YEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIG 177
Query: 481 -------------------------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
NS+ + RG +N A+ D++ +++ E
Sbjct: 178 DAKRSIGLYEEAITYYNKVIELSNGNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDE 237
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
AY G A ++ YK+A + KAI+L + A+ + L E A+E
Sbjct: 238 YTDAYNNRGTAEYNLELYKEAIKDFDKAIELSPQYFYAYNNRGNAKSALGLYEDAIEDFN 297
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + I+ ++ AY+ R + + +G H +A+KD + +D ++I Y R Y+ + +Y
Sbjct: 298 KAISIEPQYIDAYYNRAIAKNNMGLHNEAVKDYDMVIELDNNHINAYYNRGLSYYNLADY 357
Query: 636 REAV 639
EA+
Sbjct: 358 EEAI 361
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 1/256 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
G+ E ++ A +F + LKED E G A+ E AI+ + + I+
Sbjct: 4 FEEGLQLFRETQFEKASELFLKALKEDANNSEIYNYLGIAKQALGLFEEAINYYNKGIEV 63
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + E + R + LG A++D K +E P + +RG + A++
Sbjct: 64 DENYAELYYNRANCESNLGLYEAAVKDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIK 123
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D+ + LD N AY +Y +A E + K ++LD + A+ + + +
Sbjct: 124 DIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSI 183
Query: 565 ANSEKALECLQQVLYI-DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
E+A+ +V+ + + S AY+ RG GLG + +AI D++ L I +
Sbjct: 184 GLYEEAITYYNKVIELSNGNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDEYTDAYN 243
Query: 624 LRASCYHAIGEYREAV 639
R + + + Y+EA+
Sbjct: 244 NRGTAEYNLELYKEAI 259
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 5/216 (2%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + E A F +A++ + + E + G A+ ALG EAI +K +E + N A++ +
Sbjct: 13 ETQFEKASELFLKALKEDANNSEIYNYLGIAKQALGLFEEAINYYNKGIEVDENYAELYY 72
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
R + AAV+D ++L + AY G A ++G Y++A + KAI LD
Sbjct: 73 NRANCESNLGLYEAAVKDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLD 132
Query: 548 RNFLEAWGHLTQFYQDLANSE--KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
N ++A+ + + + L + + +A+E ++VL +D AY+ G +G +++AI
Sbjct: 133 SNNIDAY--IDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSIGLYEEAI 190
Query: 606 KDLSSGLGIDPSNIECLY-LRASCYHAIGEYREAVI 640
+ + + N Y R +C +G Y EA+I
Sbjct: 191 TYYNKVIELSNGNSSYAYNNRGACKIGLGLYNEAII 226
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR LEL+K I+D DKA++L P AY +G A SALG E+A+ + K
Sbjct: 244 NRGTAEYNLELYKEAIKDFDKAIELSPQYFYAYNNRGNAKSALGLYEDAIEDFNKA 299
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++K I + D A+ Y NRA C S L L++ ++D DK ++L PT +AY
Sbjct: 53 AINYYNKGIEV-DENYAELY-----YNRANCESNLGLYEAAVKDYDKVIELVPTHSKAYD 106
Query: 108 LKGCAFSALGRKEEAL 123
+G A LG EEA+
Sbjct: 107 DRGYAKGNLGYYEEAI 122
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ +++KAI I + Y NRA + + LH ++D D ++LD + AY
Sbjct: 292 AIEDFNKAISIEPQYIDAYY------NRAIAKNNMGLHNEAVKDYDMVIELDNNHINAYY 345
Query: 108 LKGCAFSALGRKEEALSVWEK 128
+G ++ L EEA+ +++
Sbjct: 346 NRGLSYYNLADYEEAIKNYDR 366
>gi|119487888|ref|ZP_01621385.1| O-linked GlcNAc transferase [Lyngbya sp. PCC 8106]
gi|119455464|gb|EAW36602.1| O-linked GlcNAc transferase [Lyngbya sp. PCC 8106]
Length = 614
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 150/364 (41%), Gaps = 18/364 (4%)
Query: 276 QSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISD 335
Q S +F +AS+ E Q N +H KL SD S + SN + +S ++
Sbjct: 171 QDSINFLTQEASASQASIEELKQLQLNLIESLH-KLKSDFKSKDHSNLIQFPGANNSHNN 229
Query: 336 NKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEG 395
+ S F W + + S + D L +G A N+
Sbjct: 230 LPKRNQLNSNFPSEFDWSF-----------------QFNSSPDLIADDYLKQGEALNNDK 272
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y+ A+ F++ K +P EA +G A+ + + +Q +P EAW R
Sbjct: 273 RYSEALISFEKAAKMNPNLEEAWYNQGNILVRLNRYNEALKAYEKVVQIHPQKYEAWYNR 332
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA++ AL +PN + H RG + KFK ++ A+ +++
Sbjct: 333 GNVLVKLKRYSEALESYDHALAIQPNDDEAWHNRGALLRKFKRYDEALTSYDKALEIQPN 392
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ G L + Y++A ++ +AI +D E W + L E+A+ +
Sbjct: 393 KYETWHNRGNVLGKLKRYEEAIISYDRAITIDAGKREVWLNRAVALCKLKRYEQAIASFE 452
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
Q + +D + +++R LLH LG++ +AI + + P+ E + S + +Y
Sbjct: 453 QAIGLDPTSPELWNMRASLLHQLGRYSEAIDSFENAIEHQPNCYEAWLGKGSVLVQLKQY 512
Query: 636 REAV 639
EA+
Sbjct: 513 SEAL 516
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 2/255 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RG V +Y+ A+ +D L P EA RG R F+R + A++ + +A++
Sbjct: 331 NRGNVLVKLKRYSEALESYDHALAIQPNDDEAWHNRGALLRKFKR-YDEALTSYDKALEI 389
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ E W RG L EAI +A+ + ++ R + K K + A+
Sbjct: 390 QPNKYETWHNRGNVLGKLKRYEEAIISYDRAITIDAGKREVWLNRAVALCKLKRYEQAIA 449
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ LD + + L +G Y +A ++ AI+ N EAW L
Sbjct: 450 SFEQAIGLDPTSPELWNMRASLLHQLGRYSEAIDSFENAIEHQPNCYEAWLGKGSVLVQL 509
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ALE ++ + I S+A+ +GLL L Q+ AI + + P++ E
Sbjct: 510 KQYSEALETYEKAITIQPEASEAWRHKGLLFEKLEQYPDAIAAYDQAIKLQPNDAEAWRF 569
Query: 625 RASCYHAIGEYREAV 639
R + + Y+EA+
Sbjct: 570 RGALLSKLKNYQEAI 584
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI +D+ + D E + R A + E AI+ F +AI +P++ E W R
Sbjct: 409 RYEEAIISYDRAITIDAGKREVWLNRAVALCKLKRYEQAIASFEQAIGLDPTSPELWNMR 468
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
LG EAI A+E +PN + +G V + K ++ A+E + + E
Sbjct: 469 ASLLHQLGRYSEAIDSFENAIEHQPNCYEAWLGKGSVLVQLKQYSEALETYEKAITIQPE 528
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ + GL + +Y A A+ +AI+L N EAW L N ++A+ L
Sbjct: 529 ASEAWRHKGLLFEKLEQYPDAIAAYDQAIKLQPNDAEAWRFRGALLSKLKNYQEAISSLG 588
Query: 576 QVLYIDKRF 584
+ + I K
Sbjct: 589 KAISIQKEL 597
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y+ AI F+ ++ P EA +G+G+ ++ A+ + +AI P A EAW+
Sbjct: 476 GRYSEAIDSFENAIEHQPNCYEAWLGKGSVLVQLKQYSEALETYEKAITIQPEASEAWRH 535
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G L + +AI +A++ +PN A+ RG + K K++ A+ L + + K
Sbjct: 536 KGLLFEKLEQYPDAIAAYDQAIKLQPNDAEAWRFRGALLSKLKNYQEAISSLGKAISIQK 595
Query: 515 ENKSA 519
E +S
Sbjct: 596 ELRSV 600
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%)
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
K ++ A+ K++ + A+ G L + Y +A +A+ K +Q+ EAW +
Sbjct: 272 KRYSEALISFEKAAKMNPNLEEAWYNQGNILVRLNRYNEALKAYEKVVQIHPQKYEAWYN 331
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
L +ALE L I +A+H RG LL ++ +A+ L I P
Sbjct: 332 RGNVLVKLKRYSEALESYDHALAIQPNDDEAWHNRGALLRKFKRYDEALTSYDKALEIQP 391
Query: 617 SNIECLYLRASCYHAIGEYREAVI 640
+ E + R + + Y EA+I
Sbjct: 392 NKYETWHNRGNVLGKLKRYEEAII 415
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G V +Y+ A+ +++ + P EA +G + AI+ + +AI+
Sbjct: 500 LGKGSVLVQLKQYSEALETYEKAITIQPEASEAWRHKGLLFEKLEQYPDAIAAYDQAIKL 559
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
P+ EAW+ RG + L EAI L KA+ +
Sbjct: 560 QPNDAEAWRFRGALLSKLKNYQEAISSLGKAISIQ 594
>gi|428202816|ref|YP_007081405.1| tetratricopeptide repeat protein,protein kinase family protein
[Pleurocapsa sp. PCC 7327]
gi|427980248|gb|AFY77848.1| tetratricopeptide repeat protein,protein kinase family protein
[Pleurocapsa sp. PCC 7327]
Length = 739
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A++ ++Q LK P Y EA G+G Q+ + ++ + +AIQ P+ + R
Sbjct: 373 YDRALAAYEQALKIRPEYGEAWQGKGDVFQAQKRYKESLIAYEKAIQIQPNRWQPRLGRA 432
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q LG++ EAI+ K ++ +PN A+ V + ++ A+ +K+ EN
Sbjct: 433 QVLDKLGKNQEAIETYKKVIKIKPNLAEAWLGLAQVQMELNQYSEAIASYDRLLKMQPEN 492
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A+ G A ++ EY+KA +++ KA+ + + AW +L EKA+E +
Sbjct: 493 SLAWYQQGWAWQNLREYEKAIKSYDKAVDIKPDLSSAWYQKGNVLMNLEEYEKAVEAYAK 552
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ + +A++ +G+ L LG++++AI S + + + Y + H + Y
Sbjct: 553 AVQFQPKLHQAWYSQGIALSKLGRNEEAIAAYSQATQVKSNYAQAWYQKGWMLHQLKRYE 612
Query: 637 EAV 639
EA+
Sbjct: 613 EAI 615
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 132/279 (47%), Gaps = 5/279 (1%)
Query: 366 KKFCVTRISKSKSISVD---FRLSRGIAQVNE--GKYASAISIFDQILKEDPMYPEALIG 420
K++ + I+ K+I + ++ G AQV + GK AI + +++K P EA +G
Sbjct: 405 KRYKESLIAYEKAIQIQPNRWQPRLGRAQVLDKLGKNQEAIETYKKVIKIKPNLAEAWLG 464
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+ + AI+ + ++ P AW ++G A L E +AI+ KA++ +P
Sbjct: 465 LAQVQMELNQYSEAIASYDRLLKMQPENSLAWYQQGWAWQNLREYEKAIKSYDKAVDIKP 524
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + +++G V +++ AVE + V+ + A+ G+ALS +G ++A A+
Sbjct: 525 DLSSAWYQKGNVLMNLEEYEKAVEAYAKAVQFQPKLHQAWYSQGIALSKLGRNEEAIAAY 584
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+A Q+ N+ +AW L E+A+ V+ + +A++ +G +L+ LG
Sbjct: 585 SQATQVKSNYAQAWYQKGWMLHQLKRYEEAISAYDTVIRLRPSDYQAWYNKGNVLYNLGN 644
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ AI + I+ + + + + Y EAV
Sbjct: 645 YEGAIAAYKQTVAIERDYYQAWNSQGNALLLLKRYDEAV 683
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 2/231 (0%)
Query: 388 GIAQVNE--GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
G+AQV +Y+ AI+ +D++LK P A +G A RE E AI + +A+
Sbjct: 464 GLAQVQMELNQYSEAIASYDRLLKMQPENSLAWYQQGWAWQNLREYEKAIKSYDKAVDIK 523
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW ++G L E +A++ +KA++F+P + +GI K A+
Sbjct: 524 PDLSSAWYQKGNVLMNLEEYEKAVEAYAKAVQFQPKLHQAWYSQGIALSKLGRNEEAIAA 583
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++ A+ G L + Y++A A+ I+L + +AW + +L
Sbjct: 584 YSQATQVKSNYAQAWYQKGWMLHQLKRYEEAISAYDTVIRLRPSDYQAWYNKGNVLYNLG 643
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
N E A+ +Q + I++ + +A++ +G L L ++ +A+ L P
Sbjct: 644 NYEGAIAAYKQTVAIERDYYQAWNSQGNALLLLKRYDEAVNAYDRALRYQP 694
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+A L+ +G + ++ KD++ A+ +K+ E A+ G + YK++ A+
Sbjct: 355 NNATDLYRQGNILYELKDYDRALAAYEQALKIRPEYGEAWQGKGDVFQAQKRYKESLIAY 414
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAIQ+ N + Q L +++A+E ++V+ I ++A+ + L Q
Sbjct: 415 EKAIQIQPNRWQPRLGRAQVLDKLGKNQEAIETYKKVIKIKPNLAEAWLGLAQVQMELNQ 474
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +AI L + P N Y + + + EY +A+
Sbjct: 475 YSEAIASYDRLLKMQPENSLAWYQQGWAWQNLREYEKAI 513
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 75/167 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G +N +Y A+ + + ++ P +A +G A + E AI+ +++A Q
Sbjct: 533 KGNVLMNLEEYEKAVEAYAKAVQFQPKLHQAWYSQGIALSKLGRNEEAIAAYSQATQVKS 592
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +AW ++G L EAI + P+ + +G V + ++ A+
Sbjct: 593 NYAQAWYQKGWMLHQLKRYEEAISAYDTVIRLRPSDYQAWYNKGNVLYNLGNYEGAIAAY 652
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
V ++++ A+ G AL + Y +A A+ +A++ ++ +A
Sbjct: 653 KQTVAIERDYYQAWNSQGNALLLLKRYDEAVNAYDRALRYQPDYRQA 699
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
LN+ + I D L+++ +++ + +LR + KAI+ D ++ +I+
Sbjct: 472 LNQYSEAIASYDRLLKMQP--ENSLAWYQQGWAWQNLREYEKAIKSYD----KAVDIKPD 525
Query: 73 CNRAF-----CYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
+ A+ LE ++ + KA+Q P L QA+ +G A S LGR EEA++ +
Sbjct: 526 LSSAWYQKGNVLMNLEEYEKAVEAYAKAVQFQPKLHQAWYSQGIALSKLGRNEEAIAAYS 585
Query: 128 KG------YEHALHQSA-DLKQFLELEELLTA 152
+ Y A +Q L Q EE ++A
Sbjct: 586 QATQVKSNYAQAWYQKGWMLHQLKRYEEAISA 617
>gi|404475555|ref|YP_006706986.1| hypothetical protein B2904_orf895 [Brachyspira pilosicoli B2904]
gi|404437044|gb|AFR70238.1| TPR domain-containing protein [Brachyspira pilosicoli B2904]
Length = 318
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 34/233 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GI + G+YA AI +D+ +K +P +A + A+ L+ AI ++ +AI+
Sbjct: 103 SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLVLLKEAIEEYDKAIELR 162
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG ++ LG EAI+D KAL +PN D + +G++ + + A++D
Sbjct: 163 ADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFYKEAIKD 222
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ AY G+A +G+YK+A E + KAI+L+ N
Sbjct: 223 FNKAIKLNPNYALAYNNRGIAKDELGQYKEAIEDYDKAIELEPN---------------- 266
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
LY D RG + G +K+A+KD L +DP N
Sbjct: 267 ---------TAYLYND---------RGWVKKNAGLYKEALKDYKKALELDPDN 301
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR---AFQRELEAAISDFTEAI 442
+RG+ + + G AI FD+ L DP +A +G F +E AI DF +AI
Sbjct: 171 NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFYKE---AIKDFNKAI 227
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP+ A+ RG A+ LG+ EAI+D KA+E EPN+A + ++RG V + A
Sbjct: 228 KLNPNYALAYNNRGIAKDELGQYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEA 287
Query: 503 VEDLSACVKLDKENKSA 519
++D ++LD +N+ A
Sbjct: 288 LKDYKKALELDPDNEYA 304
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 17/233 (7%)
Query: 424 ARAFQRELEAAISD-------FTEAIQS----------NPSAGEAWKRRGQARAALGESV 466
A+AF EL +SD FT + + N + + +G ++A GE
Sbjct: 56 AKAFNEELNKIMSDKKHFIVSFTNIVDNEKEVDIDRLNNLTDYHDYNSKGIYKSANGEYA 115
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI+ +A++ PN AD + + I K A+E+ ++L + AY GL
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLVLLKEAIEEYDKAIELRADYTYAYYNRGLL 175
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
S +G ++A + KA+ +D N +A+ + +L ++A++ + + ++ ++
Sbjct: 176 KSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFYKEAIKDFNKAIKLNPNYAL 235
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY+ RG+ LGQ+K+AI+D + ++P+ R G Y+EA+
Sbjct: 236 AYNNRGIAKDELGQYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEAL 288
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 19 TICEIDELVRVDSVMASAITAR-IELAKLCSLRN----WSKAIRILDSLLAQSYEIQDIC 73
I DE ++++ MA A + I KL L+ + KAI + Y
Sbjct: 117 AIKYYDEAIKLNPNMADAYYNKAIAKTKLVLLKEAIEEYDKAIELRADYTYAYY------ 170
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR S L L + I+D DKAL +DP L AY KG LG +EA+ + K
Sbjct: 171 NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFYKEAIKDFNKA 226
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ KA+ I D L +Y N+ +L +K I+D +KA++L+P AY
Sbjct: 185 AIKDFDKALSI-DPNLFDAYN-----NKGLLEDELGFYKEAIKDFNKAIKLNPNYALAYN 238
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G A LG+ +EA+ ++K E
Sbjct: 239 NRGIAKDELGQYKEAIEDYDKAIE 262
>gi|359460420|ref|ZP_09248983.1| hypothetical protein ACCM5_16963 [Acaryochloris sp. CCMEE 5410]
Length = 266
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 100/190 (52%), Gaps = 6/190 (3%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F V +S + + L +G AQ +G Y AI+ ++Q L+ +P + E + RG A
Sbjct: 29 FQVAAVSTAVRL-----LEKGQAQAKQGNYQGAIATYNQALQANPRFTEVYLARGLAYHD 83
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + AI+DF +A+ P RG+ R+ +G+ A+ DL++A+E +PN A+ +
Sbjct: 84 LQNYQQAIADFNQALNIEPQNAVVLYNRGETRSDVGDLDGAMSDLNQAIEVDPNYAEAFN 143
Query: 488 ERGIV-NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
R I+ + + + A++DL +KL +AY G L+++G+ A + +AI +
Sbjct: 144 LRAILYSTRLGNLKLALDDLQHAIKLQPNYANAYYNRGNILTAMGDIDGAITDYTQAINI 203
Query: 547 DRNFLEAWGH 556
D EA+GH
Sbjct: 204 DAKLAEAYGH 213
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ +G A+A Q + AI+ + +A+Q+NP E + RG A L +AI D ++AL
Sbjct: 40 LLEKGQAQAKQGNYQGAIATYNQALQANPRFTEVYLARGLAYHDLQNYQQAIADFNQALN 99
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS-IGEYKKA 536
EP +A +L+ RG D + A+ DL+ +++D A+ + S+ +G K A
Sbjct: 100 IEPQNAVVLYNRGETRSDVGDLDGAMSDLNQAIEVDPNYAEAFNLRAILYSTRLGNLKLA 159
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ AI+L N+ A+ + + + + A+ Q + ID + ++AY RGLLL
Sbjct: 160 LDDLQHAIKLQPNYANAYYNRGNILTAMGDIDGAITDYTQAINIDAKLAEAYGHRGLLLA 219
Query: 597 GLGQHKKAIKDLSSG------LGIDPSNIE 620
G + +KDL LG DP N +
Sbjct: 220 RKGDTQAGLKDLQKAADLFQELG-DPENYQ 248
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N + A+ Q L + RF++ Y RGL H L +++AI D + L I+P N LY R
Sbjct: 52 NYQGAIATYNQALQANPRFTEVYLARGLAYHDLQNYQQAIADFNQALNIEPQNAVVLYNR 111
Query: 626 ASCYHAIGE 634
+G+
Sbjct: 112 GETRSDVGD 120
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G A + G Y+ A + +A+Q + F E + Y DL N ++A+ Q L I+ +
Sbjct: 44 GQAQAKQGNYQGAIATYNQALQANPRFTEVYLARGLAYHDLQNYQQAIADFNQALNIEPQ 103
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
+ + RG +G A+ DL+ + +DP+ E LRA Y
Sbjct: 104 NAVVLYNRGETRSDVGDLDGAMSDLNQAIEVDPNYAEAFNLRAILY 149
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
+K P Y A RG +++ AI+D+T+AI + EA+ RG A G++
Sbjct: 167 IKLQPNYANAYYNRGNILTAMGDIDGAITDYTQAINIDAKLAEAYGHRGLLLARKGDTQA 226
Query: 468 AIQDLSKALEFEPNSADILHERG 490
++DL KA AD+ E G
Sbjct: 227 GLKDLQKA-------ADLFQELG 242
>gi|384210297|ref|YP_005596017.1| hypothetical protein Bint_2843 [Brachyspira intermedia PWS/A]
gi|343387947|gb|AEM23437.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 233
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 101/187 (54%), Gaps = 7/187 (3%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
EGKY AI +++ ++ DP Y A RG+ +A E E AI D+ AI+ + + A+
Sbjct: 26 EGKYEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYN 85
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A+ LGE EAI+D KA+E + + +D + RGIV + +++D + ++L+
Sbjct: 86 NRGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIELN 145
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLEAWG----HLTQFYQDLAN 566
+ AY G +G+Y +A + + KAI+L+ N F G +L ++ + L +
Sbjct: 146 PNDSDAYYNRGTVKDVLGKYGEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALKD 205
Query: 567 SEKALEC 573
+KALE
Sbjct: 206 YKKALEL 212
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 99/189 (52%), Gaps = 5/189 (2%)
Query: 367 KFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
K+ + +K+I +D S RG + + G+Y AI +D ++ D Y A R
Sbjct: 28 KYEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNR 87
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A+ + E E AI D+ +AI+ + +A+ RG + LG+ ++I+D +K +E PN
Sbjct: 88 GLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIELNPN 147
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+D + RG V + A++D ++L+ N + Y G++ ++ EY +A + +
Sbjct: 148 DSDAYYNRGTVKDVLGKYGEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALKDYK 207
Query: 542 KAIQLDRNF 550
KA++LD N+
Sbjct: 208 KALELDPNY 216
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 93/177 (52%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ EAI +KA+E +PN + + RG V ++ A++D ++LD AY
Sbjct: 27 GKYEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNN 86
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
GLA +GEY++A + + KAI+LD ++ +A+ + L E +++ +V+ ++
Sbjct: 87 RGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIELNP 146
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
S AY+ RG + LG++ +AIKD + ++P+N R + EY EA+
Sbjct: 147 NDSDAYYNRGTVKDVLGKYGEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEAL 203
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 96/191 (50%)
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ + E AI + +AI+ +P+ A+ RG +A LGE EAI+D A+E + N
Sbjct: 25 LEGKYEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAY 84
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ RG+ ++ A++D ++LD + AY G+ + +G+Y+ + + K I+L
Sbjct: 85 NNRGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIEL 144
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ N +A+ + L +A++ + + ++ Y+ RG+ L ++ +A+K
Sbjct: 145 NPNDSDAYYNRGTVKDVLGKYGEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALK 204
Query: 607 DLSSGLGIDPS 617
D L +DP+
Sbjct: 205 DYKKALELDPN 215
>gi|157872758|ref|XP_001684907.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127977|emb|CAJ06696.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 847
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 3/281 (1%)
Query: 360 NEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
N A+ + F TR + DF +RG Q +G YA+AI+ + + DP + ++
Sbjct: 492 NHARATQAF--TRAIELDDRHPDFYHNRGFTQRKQGAYAAAIADYTTAVSLDPKHFKSHY 549
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
R + E A++D+ A+Q + + A+ RG A A LG A++D ++AL
Sbjct: 550 NRAYCFSKLGRYEEAVADYAAALQIDSNNANAYHNRGAALAQLGRLEAAVEDFNRALRLN 609
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P L+ RG+V + + ++ A+ D + ++LD+ N + G ++G+ + A
Sbjct: 610 PKLTFALNARGLVYDQLQQYDKALADFTEAIRLDQRNSAWLHNRGYTYRNMGKLELAIAD 669
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF-SKAYHLRGLLLHGL 598
+ +I+L + A+ + ++ L E A+E + L +K + R L
Sbjct: 670 YSASIKLAPHSHTAYTNRAFAFRKLGRYEAAIEDYTKALREHPGVATKVLNNRAYCFARL 729
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI+D + L DP N LY R + G+Y AV
Sbjct: 730 NLFEDAIRDYTEVLATDPVNAHALYNRGISFEKCGKYNAAV 770
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 102/243 (41%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI + L DP P G + + A FT AI+ + + + RG
Sbjct: 459 YTRAIEDYTAALDLDPRNPFTHYNLGISYDHKGNHARATQAFTRAIELDDRHPDFYHNRG 518
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ G AI D + A+ +P + R K + AV D +A +++D N
Sbjct: 519 FTQRKQGAYAAAIADYTTAVSLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAALQIDSNN 578
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+AY G AL+ +G + A E +A++L+ A Y L +KAL +
Sbjct: 579 ANAYHNRGAALAQLGRLEAAVEDFNRALRLNPKLTFALNARGLVYDQLQQYDKALADFTE 638
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ +D+R S H RG +G+ + AI D S+ + + P + RA + +G Y
Sbjct: 639 AIRLDQRNSAWLHNRGYTYRNMGKLELAIADYSASIKLAPHSHTAYTNRAFAFRKLGRYE 698
Query: 637 EAV 639
A+
Sbjct: 699 AAI 701
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG N GK AI+ + +K P A R A AF++ EAAI D+T+A++
Sbjct: 652 NRGYTYRNMGKLELAIADYSASIKLAPHSHTAYTNR--AFAFRKLGRYEAAIEDYTKALR 709
Query: 444 SNPS-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+P A + R A L +AI+D ++ L +P +A L+ RGI K +NAA
Sbjct: 710 EHPGVATKVLNNRAYCFARLNLFEDAIRDYTEVLATDPVNAHALYNRGISFEKCGKYNAA 769
Query: 503 VEDLSACVKLDKENKS---AYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
V+D + ++L E S +Y G + + + +A E +A++LD
Sbjct: 770 VDDFTRAIRLAPEAPSTANSYYSRGTSRLQLHQVPQAAEDLKQALKLD 817
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
NRA+C+S+L ++ + D ALQ+D AY +G A + LGR E A+
Sbjct: 550 NRAYCFSKLGRYEEAVADYAAALQIDSNNANAYHNRGAALAQLGRLEAAV 599
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE--------------DPMYPEALIGRGTARAFQR 429
RL R A V YASA + D ++E D + EAL RG RA
Sbjct: 49 RLLRAKAYVQLHDYASACADLDDWIQETDRIVHGISAGAAADSL-TEALFYRGVCRARLS 107
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
+++ A++DFT+ +Q P A R A L + AI D AL+ +
Sbjct: 108 QVKDAVADFTDVLQRKPGHQRAHYERAACYARLDDFCSAIADYEAALQLD 157
>gi|209526966|ref|ZP_03275483.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
gi|209492568|gb|EDZ92906.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
Length = 631
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 126/261 (48%), Gaps = 1/261 (0%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I+ DF L +G A +NE +Y AI+ D+ L+ +P EA +G A ++ A+ +
Sbjct: 267 IADDF-LKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALECY 325
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
A++ P +AW RG L A++ ++AL+ EPN + H RG + KF+
Sbjct: 326 DRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKFQK 385
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A++ ++L+ + + G LS + Y++A ++ +AIQ++ + W +
Sbjct: 386 YEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRG 445
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ +AL C +Q + ++ + + + +G +L L +H++A+ + + +
Sbjct: 446 MALCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSDS 505
Query: 619 IECLYLRASCYHAIGEYREAV 639
E R A+ +Y +A+
Sbjct: 506 YEAWMGRGEILTALKQYEQAL 526
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 116/272 (42%), Gaps = 2/272 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAF 427
C R K + D +RG V +Y+ A+ ++Q LK +P RG R F
Sbjct: 324 CYDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKF 383
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q+ E A+ + AI+ + E W RG + L EAI +A++ P DI
Sbjct: 384 QK-YEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 442
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ ++ A+ + L+ + + G L + +++A + +AI L
Sbjct: 443 NRGMALCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLK 502
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ EAW + L E+AL +V+ + +A+ RG+ L + QH AI
Sbjct: 503 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIAC 562
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + + P + E R + + +Y+EA+
Sbjct: 563 FDTAIALKPDHAESWRHRGALLSRLKKYQEAI 594
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 110/229 (48%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P+ + + +G A +R+ + AI+ A++ NP EAW ++G A L + +A++
Sbjct: 265 PLIADDFLKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALEC 324
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+AL+ +P +D + RG V + K ++ A+E + +K++ + + + G L
Sbjct: 325 YDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKFQ 384
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+Y++A +++ +AI+L+ N E W + L ++A+ + + I+ + R
Sbjct: 385 KYEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 444
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
G+ L + Q+ +A+ + ++ E + + + EAVI
Sbjct: 445 GMALCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVI 493
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 96/219 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ +D+ ++ + + E RG + + + AIS + AIQ NP + W R
Sbjct: 385 KYEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 444
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + + EA+ +A+ ++ +G V K AV + L +
Sbjct: 445 GMALCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSD 504
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G L+++ +Y++A + I L + +AW + + + A+ C
Sbjct: 505 SYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIACFD 564
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + ++++ RG LL L ++++AI L + I
Sbjct: 565 TAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISI 603
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A + +Y+ A+S ++Q + + PE I +G E A+ + A
Sbjct: 439 DIWANRGMALCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRA 498
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I + EAW RG+ AL + +A+ + + + +P++ +RGI K + +
Sbjct: 499 ISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDD 558
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A+ + L ++ ++ + G LS + +Y++A + KAI + ++
Sbjct: 559 AIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKDL 607
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AIS +D+ ++ +P + RG A + A+S + +AI N E W +
Sbjct: 419 RYQEAISSYDRAIQINPGQFDIWANRGMALCHIHQYSEALSCYEQAISLNSKEPELWISQ 478
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +A+ + +S + RG + K + A+ + + L +
Sbjct: 479 GGVLVKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPD 538
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L + ++ A AI L + E+W H L ++A+ L
Sbjct: 539 AYQAWCQRGICLEKMEQHDDAIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLG 598
Query: 576 QVLYIDK 582
+ + I K
Sbjct: 599 KAISIQK 605
>gi|320101816|ref|YP_004177407.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
gi|319749098|gb|ADV60858.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
Length = 923
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 109/256 (42%), Gaps = 36/256 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A G AI + +L+ DP AL+ RG + E E AI D+ EAI+
Sbjct: 589 FNRGLALRARGMELEAIQDYTSVLEIDPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRL 648
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG A +A G+ AI D ++++E EP + + RG F ++
Sbjct: 649 APDHALAHLNRGYAFSAQGDHERAIADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIP 708
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ-LDRNFLEAWGHLTQFYQD 563
D + + LD E+ SAY AL S+G +A E + +A+Q L R+
Sbjct: 709 DFTQAIALDPEDGSAYANRAFALHSLGAVAQAIEDYTQALQRLGRD-------------- 754
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ Y+ RG+ G H+ AI D + L I PS++
Sbjct: 755 ---------------------ASTYYNRGVAHRDRGDHRAAIDDFAEALRIQPSDVAAAV 793
Query: 624 LRASCYHAIGEYREAV 639
A C A+G+ A+
Sbjct: 794 NLAVCRQAVGDLERAL 809
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 4/257 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + Y AI+ + + ++ DP PE R A + E AI D + I+
Sbjct: 487 LRRGDLFLKHRAYEQAIADYSRAIRLDPREPEGFRKRALAYRLMGDFEQAIRDGSTLIEL 546
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ +RG + +G+ AI D SKA+ +P RG+ A++
Sbjct: 547 SPRDPTAYLQRGYSYHQIGDYDRAIADYSKAIRLDPGETSGYFNRGLALRARGMELEAIQ 606
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++ +++D ++ SA G GE++KA + +AI+L + A HL + Y
Sbjct: 607 DYTSVLEIDPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPD--HALAHLNRGYAFS 664
Query: 565 ANS--EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
A E+A+ + + ++ R AY+ RG LGQ ++I D + + +DP +
Sbjct: 665 AQGDHERAIADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFTQAIALDPEDGSAY 724
Query: 623 YLRASCYHAIGEYREAV 639
RA H++G +A+
Sbjct: 725 ANRAFALHSLGAVAQAI 741
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 110/232 (47%)
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
L+ +P P ++ RG R E AI+D++ AI+ +P E +++R A +G+ +
Sbjct: 476 LQREPDRPRHVLRRGDLFLKHRAYEQAIADYSRAIRLDPREPEGFRKRALAYRLMGDFEQ 535
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI+D S +E P +RG + D++ A+ D S ++LD S Y GLAL
Sbjct: 536 AIRDGSTLIELSPRDPTAYLQRGYSYHQIGDYDRAIADYSKAIRLDPGETSGYFNRGLAL 595
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ G +A + + +++D + A + Y+ EKA+ + + + + A
Sbjct: 596 RARGMELEAIQDYTSVLEIDPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPDHALA 655
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ RG G H++AI D + + ++P N Y R + +G++ ++
Sbjct: 656 HLNRGYAFSAQGDHERAIADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSI 707
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A +G + AI+ F + ++ +P P A RG A + +I DFT+AI
Sbjct: 657 LNRGYAFSAQGDHERAIADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFTQAIAL 716
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P G A+ R A +LG +AI+D ++AL+ A + RG+ + D AA++
Sbjct: 717 DPEDGSAYANRAFALHSLGAVAQAIEDYTQALQRLGRDASTYYNRGVAHRDRGDHRAAID 776
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + +++ + +A L + ++G+ ++A +AI+LD + E + + +
Sbjct: 777 DFAEALRIQPSDVAAAVNLAVCRQAVGDLERALADLNEAIRLDPDEAEIYLIRGRLHLQR 836
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ +A L ++ A LRGL L LG+ A+ DLS L
Sbjct: 837 GDPTQAAADFAAALKLNPDLPSALRLRGLALFKLGKRLTALLDLSRSL 884
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 14/263 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG G++ AI +D+ ++ P + A + RG A + Q + E AI+DFT +I+
Sbjct: 623 VNRGFTYRLRGEFEKAIRDYDEAIRLAPDHALAHLNRGYAFSAQGDHERAIADFTRSIEL 682
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFK 497
P A+ RG A LG+ +I D ++A+ +P N A LH G V +
Sbjct: 683 EPRNPAAYYNRGFAWTCLGQFARSIPDFTQAIALDPEDGSAYANRAFALHSLGAVAQAIE 742
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+ A++ L + S Y G+A G+++ A + +A+++ + + A +L
Sbjct: 743 DYTQALQRLG-------RDASTYYNRGVAHRDRGDHRAAIDDFAEALRIQPSDVAAAVNL 795
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
Q + + E+AL L + + +D ++ Y +RG L G +A D ++ L ++P
Sbjct: 796 AVCRQAVGDLERALADLNEAIRLDPDEAEIYLIRGRLHLQRGDPTQAAADFAAALKLNPD 855
Query: 618 NIECLYLRASCYHAIGEYREAVI 640
L LR +G+ A++
Sbjct: 856 LPSALRLRGLALFKLGKRLTALL 878
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 34/203 (16%)
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D E +Q P RRG +AI D S+A+ +P + +R +
Sbjct: 471 DIEERLQREPDRPRHVLRRGDLFLKHRAYEQAIADYSRAIRLDPREPEGFRKRALAYRLM 530
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
DF A+ D S ++L + +AY G + IG+Y +A + KAI+LD G
Sbjct: 531 GDFEQAIRDGSTLIELSPRDPTAYLQRGYSYHQIGDYDRAIADYSKAIRLD------PGE 584
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ ++ RGL L G +AI+D +S L IDP
Sbjct: 585 TSGYFN----------------------------RGLALRARGMELEAIQDYTSVLEIDP 616
Query: 617 SNIECLYLRASCYHAIGEYREAV 639
++ L R Y GE+ +A+
Sbjct: 617 KDVSALVNRGFTYRLRGEFEKAI 639
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 16/108 (14%)
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
++ + NR F Y + IRD D+A++L P A++ +G AFSA G E A+
Sbjct: 618 DVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPDHALAHLNRGYAFSAQGDHERAI---- 673
Query: 128 KGYEHALHQSADLKQFLELEELLTAAKQDRSV--TCEYDVSNSMSSLT 173
AD + +ELE AA +R TC + S+ T
Sbjct: 674 ----------ADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFT 711
>gi|338738138|ref|YP_004675100.1| hypothetical protein HYPMC_1295 [Hyphomicrobium sp. MC1]
gi|337758701|emb|CCB64526.1| TPR repeat-containing protein [Hyphomicrobium sp. MC1]
Length = 557
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 148/329 (44%), Gaps = 15/329 (4%)
Query: 289 DKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKL 348
D N+R N + +L A+L D N E + + ++ N +R L
Sbjct: 59 DTGLPNDRRATILNDRAVANVRLGETKAALEDYNRAVELFPEYPVAYN-------NRGNL 111
Query: 349 SFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQIL 408
LKE + R + + S + + +RG A++ G+ A+A++ F + +
Sbjct: 112 LLALGQLKEAMKDFDRA-------LLLAPSFAAAYS-NRGNARMKLGQSAAALADFTKAI 163
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ P L GRG A + AAI DF+ A+ ++ A++ R +AR A+G+ +A
Sbjct: 164 ELMPASAPPLSGRGLAYLSVGKPHAAIRDFSRAVSADARFAAAYRNRAEARMAVGQRDDA 223
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I+DLS+A+ F+PN+ ++ RG + +A++D S ++LD ++ + Y GLA
Sbjct: 224 IEDLSRAIAFDPNNGELYVVRGYAYLISGNAASAIKDFSRAIELDPKSSAGYEGRGLANG 283
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ A +AI+LD A+ Y+ + + ++ + +D +A
Sbjct: 284 VAEAFDDANSDLNRAIELDPRSPVAFAFRAYIYKQNGQPDIGAKDVETAIKLDTNSPEAL 343
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
RG + GQ AI DL L + PS
Sbjct: 344 WARGEIEEANGQADTAITDLRHALQLRPS 372
>gi|443323912|ref|ZP_21052884.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
gi|442796295|gb|ELS05593.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
Length = 348
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 27/235 (11%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL--------------- 476
+A I+++TE I P EA+ RG A + +AI D + A+
Sbjct: 41 QAQITEYTEIIGLYPRNAEAYYNRGNIYAQMKNYDQAIADYNSAIYLYLNYGETNISRRT 100
Query: 477 ------------EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
F P+ + +R + ++ A+ D S ++L+ N+ AY G
Sbjct: 101 TEYLPTSDSEYVRFNPDLERVYFDRATTYYSLGNYENAIADYSTVIRLNLGNEQAYYNRG 160
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
LAL + EY KA + + I L+ N L + + YQ LA ++A+ QV+ + +
Sbjct: 161 LALYNAKEYDKAIADYTQVISLNPNRLRVYNSRARAYQRLAQYDQAIADYSQVIKANSQN 220
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AY R L LGQ+ +AI D + ++P+N E Y RA Y + +Y +A+
Sbjct: 221 VEAYQNRAQLYISLGQYDQAIADYGQIISLNPNNPEGYYNRAEIYDDLKQYNKAI 275
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG+A N +Y AI+ + Q++ +P + ARA+QR + + AI+D+++ I+
Sbjct: 158 NRGLALYNAKEYDKAIADYTQVISLNPN--RLRVYNSRARAYQRLAQYDQAIADYSQVIK 215
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+N EA++ R Q +LG+ +AI D + + PN+ + + R + K +N A+
Sbjct: 216 ANSQNVEAYQNRAQLYISLGQYDQAIADYGQIISLNPNNPEGYYNRAEIYDDLKQYNKAI 275
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSI 530
D + +KL+ +N AY GL S +
Sbjct: 276 ADYNKIIKLNPQNAKAYYQRGLYYSYL 302
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+D++ I+ N +A+ RG A E +AI D ++ + PN + + R
Sbjct: 136 ENAIADYSTVIRLNLGNEQAYYNRGLALYNAKEYDKAIADYTQVISLNPNRLRVYNSRAR 195
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ ++ A+ D S +K + +N AY S+G+Y +A + + I L+ N
Sbjct: 196 AYQRLAQYDQAIADYSQVIKANSQNVEAYQNRAQLYISLGQYDQAIADYGQIISLNPNNP 255
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E + + + Y DL KA+ +++ ++ + +KAY+ RGL L +AI D
Sbjct: 256 EGYYNRAEIYDDLKQYNKAIADYNKIIKLNPQNAKAYYQRGLYYSYLENQDQAIADF 312
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++ K+ S +V+ +R ++ G+Y AI+ + QI+ +P PE R ++
Sbjct: 211 SQVIKANSQNVEAYQNRAQLYISLGQYDQAIADYGQIISLNPNNPEGYYNRAEIYDDLKQ 270
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
AI+D+ + I+ NP +A+ +RG + L +AI D A
Sbjct: 271 YNKAIADYNKIIKLNPQNAKAYYQRGLYYSYLENQDQAIADFKIA 315
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QSYEIQ 70
RL + + I + ++++ +S A R +L SL + +AI +++ +
Sbjct: 199 RLAQYDQAIADYSQVIKANSQNVEAYQNRAQL--YISLGQYDQAIADYGQIISLNPNNPE 256
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS------ 124
NRA Y L+ + I D +K ++L+P +AY +G +S L +++A++
Sbjct: 257 GYYNRAEIYDDLKQYNKAIADYNKIIKLNPQNAKAYYQRGLYYSYLENQDQAIADFKIAA 316
Query: 125 -VWEKGYEHALHQS 137
++E+ E HQ+
Sbjct: 317 NLYEEANEVNKHQN 330
>gi|427739371|ref|YP_007058915.1| hypothetical protein Riv7116_6007 [Rivularia sp. PCC 7116]
gi|427374412|gb|AFY58368.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 471
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 111/232 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ GK A+S D ++ P Y +AL+ +G Q++LE A+ F + I P
Sbjct: 81 RGVSLFRLGKLQEALSSLDIAIEIQPDYLKALLLQGIVMLEQKKLEPALISFEKIILIKP 140
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +AW +G LG+ +A+ KA++++P + +GI F + +A+
Sbjct: 141 NYPKAWYEKGLTLYELGQLEDALMCFDKAIQYKPKFDLAWYRKGITLFDLEQLESALICF 200
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++++ + + + G L + + + A KAI+ + + AW H DL N
Sbjct: 201 EKAIEIEPNDANTWYEKGCTLWKMEKLEYAIFCFDKAIEYNHDLNLAWYHKGIALFDLGN 260
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
E AL C ++ + I FS+A + +L+ LGQ + I + L +DP N
Sbjct: 261 FESALTCFEKAIQIQPDFSEALCRKAEILYSLGQLEDTIDTFNQVLKLDPQN 312
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 124/290 (42%), Gaps = 34/290 (11%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +GI + + K A+ F++I+ P YP+A +G +LE A+ F +AIQ
Sbjct: 113 LLQGIVMLEQKKLEPALISFEKIILIKPNYPKAWYEKGLTLYELGQLEDALMCFDKAIQY 172
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW R+G L + A+ KA+E EPN A+ +E+G +K + A+
Sbjct: 173 KPKFDLAWYRKGITLFDLEQLESALICFEKAIEIEPNDANTWYEKGCTLWKMEKLEYAIF 232
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++ + + A+ + G+AL +G ++ A KAIQ+ +F EA + L
Sbjct: 233 CFDKAIEYNHDLNLAWYHKGIALFDLGNFESALTCFEKAIQIQPDFSEALCRKAEILYSL 292
Query: 565 ANSEKALECLQQVLYIDKR------------------------FSK----------AYHL 590
E ++ QVL +D + F K A+
Sbjct: 293 GQLEDTIDTFNQVLKLDPQNCQVRNRLGTALGKSERYEDAILAFDKVIEIDSHNYAAHCF 352
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
RG LH L +++ AI L+ + I+P+ + S H + EA++
Sbjct: 353 RGYTLHKLRRNEDAIAALNKAIEINPNYDLAWKIYGSVLHKLKRNEEAIL 402
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 119/289 (41%), Gaps = 40/289 (13%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + ++ A+ I++QIL+ P +AL+ RG A E A+ DF AI ++
Sbjct: 14 GVTLIELQRFEEALLIYNQILEYKPNLYDALVFRGMALQGLENFEEALIDFERAITNSSH 73
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ W RG + LG+ EA+ L A+E +P+ L +GIV + K A+
Sbjct: 74 SHYIWYERGVSLFRLGKLQEALSSLDIAIEIQPDYLKALLLQGIVMLEQKKLEPALISFE 133
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLA 565
+ + A+ GL L +G+ + A KAIQ F AW +T F DL
Sbjct: 134 KIILIKPNYPKAWYEKGLTLYELGQLEDALMCFDKAIQYKPKFDLAWYRKGITLF--DLE 191
Query: 566 NSEKALECLQQVLYIDKR------------------------FSKA-----------YHL 590
E AL C ++ + I+ F KA YH
Sbjct: 192 QLESALICFEKAIEIEPNDANTWYEKGCTLWKMEKLEYAIFCFDKAIEYNHDLNLAWYH- 250
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+G+ L LG + A+ + I P E L +A +++G+ + +
Sbjct: 251 KGIALFDLGNFESALTCFEKAIQIQPDFSEALCRKAEILYSLGQLEDTI 299
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 113/253 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI + + SA+ F++ ++ +P +G +LE AI F +AI+ N
Sbjct: 183 KGITLFDLEQLESALICFEKAIEIEPNDANTWYEKGCTLWKMEKLEYAIFCFDKAIEYNH 242
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +G A LG A+ KA++ +P+ ++ L + + + ++
Sbjct: 243 DLNLAWYHKGIALFDLGNFESALTCFEKAIQIQPDFSEALCRKAEILYSLGQLEDTIDTF 302
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KLD +N LG AL Y+ A A K I++D + A L
Sbjct: 303 NQVLKLDPQNCQVRNRLGTALGKSERYEDAILAFDKVIEIDSHNYAAHCFRGYTLHKLRR 362
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+E A+ L + + I+ + A+ + G +LH L ++++AI L + P LY +A
Sbjct: 363 NEDAIAALNKAIEINPNYDLAWKIYGSVLHKLKRNEEAILFFDKALDLSPDQPNILYDKA 422
Query: 627 SCYHAIGEYREAV 639
CY A+ + A+
Sbjct: 423 CCYVALNKIDLAI 435
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A +Y AI FD++++ D A RG R E AI+ +AI+ NP+
Sbjct: 320 GTALGKSERYEDAILAFDKVIEIDSHNYAAHCFRGYTLHKLRRNEDAIAALNKAIEINPN 379
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AWK G L + EAI KAL+ P+ +IL+++ + A+++L
Sbjct: 380 YDLAWKIYGSVLHKLKRNEEAILFFDKALDLSPDQPNILYDKACCYVALNKIDLAIQNLQ 439
Query: 508 ACVKLD 513
+ ++
Sbjct: 440 QAININ 445
>gi|300870997|ref|YP_003785868.1| hypothetical protein BP951000_1381 [Brachyspira pilosicoli 95/1000]
gi|300688696|gb|ADK31367.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
Length = 790
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 115/212 (54%), Gaps = 5/212 (2%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
S ++ I VD GIA+ N GKY +I +++ +K +P +A + RG ++ + + E+
Sbjct: 169 SNNEEIYVDI----GIAKSNLGKYEESIEYYNKAIKLNPNNSDAYLNRGISKGYLGKYES 224
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+I+DF ++I+ P+ ++ RG ++A L E+I D +K +E N++D RG
Sbjct: 225 SINDFNKSIELTPNDENSYFNRGISKAYLRRYEESINDYNKVIELNSNNSDAYLNRGASK 284
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F + + A++D + ++L+ Y LG++ ++ +Y A E KAI+L+ N E+
Sbjct: 285 FNLEIYEEAIKDFNKVIELNPNANDVYFNLGISNFNLKKYVDAIENFNKAIELNSNNEES 344
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
+ F + +E A++ ++ L I+K ++
Sbjct: 345 Y-FFRGFSKIYLENENAIDDIRSFLKINKNYN 375
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 124/246 (50%), Gaps = 2/246 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA+ N G+Y AI +++ ++ + E + G A++ + E +I + +AI+
Sbjct: 142 FNRGIAKSNLGRYEDAIDDYNRAIELNSNNEEIYVDIGIAKSNLGKYEESIEYYNKAIKL 201
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ +A+ RG ++ LG+ +I D +K++E PN + RGI + + ++
Sbjct: 202 NPNNSDAYLNRGISKGYLGKYESSINDFNKSIELTPNDENSYFNRGISKAYLRRYEESIN 261
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+ N AY G + ++ Y++A + K I+L+ N + + +L +L
Sbjct: 262 DYNKVIELNSNNSDAYLNRGASKFNLEIYEEAIKDFNKVIELNPNANDVYFNLGISNFNL 321
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS-NIECLY 623
A+E + + ++ ++Y RG L +++ AI D+ S L I+ + NI +
Sbjct: 322 KKYVDAIENFNKAIELNSNNEESYFFRGFSKIYL-ENENAIDDIRSFLKINKNYNIYIIT 380
Query: 624 LRASCY 629
+ Y
Sbjct: 381 ILQEFY 386
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 108/211 (51%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ E +I F + I+ NP+ +A+ RG ++A L E+++D +++ PN + E
Sbjct: 50 KNYEESIKYFNKVIELNPNNEKAYFNRGLSKAYLQIYEESLKDFDISIKLNPNIDNTYLE 109
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ V + A+E+L+ + L++ N AY G+A S++G Y+ A + + +AI+L+
Sbjct: 110 KSNVLLDINKYEDAIENLNKAITLNQNNSYAYFNRGIAKSNLGRYEDAIDDYNRAIELNS 169
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N E + + +L E+++E + + ++ S AY RG+ LG+++ +I D
Sbjct: 170 NNEEIYVDIGIAKSNLGKYEESIEYYNKAIKLNPNNSDAYLNRGISKGYLGKYESSINDF 229
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + + P++ + R + Y E++
Sbjct: 230 NKSIELTPNDENSYFNRGISKAYLRRYEESI 260
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 115/235 (48%), Gaps = 4/235 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+++ Y ++ FD +K +P + + + E AI + +AI
Sbjct: 74 FNRGLSKAYLQIYEESLKDFDISIKLNPNIDNTYLEKSNVLLDINKYEDAIENLNKAITL 133
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + A+ RG A++ LG +AI D ++A+E N+ +I + GI + ++E
Sbjct: 134 NQNNSYAYFNRGIAKSNLGRYEDAIDDYNRAIELNSNNEEIYVDIGIAKSNLGKYEESIE 193
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQ 562
+ +KL+ N AY G++ +G+Y+ + K+I+L N ++ + +++ Y
Sbjct: 194 YYNKAIKLNPNNSDAYLNRGISKGYLGKYESSINDFNKSIELTPNDENSYFNRGISKAY- 252
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
L E+++ +V+ ++ S AY RG L +++AIKD + + ++P+
Sbjct: 253 -LRRYEESINDYNKVIELNSNNSDAYLNRGASKFNLEIYEEAIKDFNKVIELNPN 306
>gi|451819922|ref|YP_007456123.1| TPR repeat-containing protein [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451785901|gb|AGF56869.1| TPR repeat-containing protein [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 759
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 120/234 (51%), Gaps = 5/234 (2%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T I+ +K+ V +G+ G+ AI +++ ++ P Y E +G +
Sbjct: 515 TDINNAKAYFV-----KGLTLRKSGQNEEAIECYNKAIELKPDYAEVYNNKGNILQDLGQ 569
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AI + +AI+ NP +A+ +G A LG++ EAI+ KA E P+ + + +G
Sbjct: 570 NEEAIECYDKAIELNPDYVKAYNNKGSALQNLGQNEEAIECYDKAKELSPDYVNAYYNKG 629
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A+ ++L + +AY G AL ++G+ ++A E + KAI+L ++
Sbjct: 630 TALMNLGQDEEAIGCYDKAIELSPDYVNAYNNKGTALKNLGQNEEAIECYDKAIELSPDY 689
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ A+ + Q+L +E+A+EC + + ++ ++KAY+ +G L LG+++KA
Sbjct: 690 VNAYNNKGNVLQNLGQNEEAIECYDKAIELNPDYAKAYYNKGNALKILGKNEKA 743
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 123/258 (47%), Gaps = 2/258 (0%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F S+ + NE Y + ++I+ D +A +G + E AI + +AI
Sbjct: 490 FNESKRLLDNNE--YTKLLEKSNEIINTDINNAKAYFVKGLTLRKSGQNEEAIECYNKAI 547
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P E + +G LG++ EAI+ KA+E P+ + +G A
Sbjct: 548 ELKPDYAEVYNNKGNILQDLGQNEEAIECYDKAIELNPDYVKAYNNKGSALQNLGQNEEA 607
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E +L + +AY G AL ++G+ ++A + KAI+L +++ A+ + +
Sbjct: 608 IECYDKAKELSPDYVNAYYNKGTALMNLGQDEEAIGCYDKAIELSPDYVNAYNNKGTALK 667
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+L +E+A+EC + + + + AY+ +G +L LGQ+++AI+ + ++P +
Sbjct: 668 NLGQNEEAIECYDKAIELSPDYVNAYNNKGNVLQNLGQNEEAIECYDKAIELNPDYAKAY 727
Query: 623 YLRASCYHAIGEYREAVI 640
Y + + +G+ +A I
Sbjct: 728 YNKGNALKILGKNEKANI 745
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 93 DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
DKA++L+P ++AY KG A LG+ EEA+ ++K E
Sbjct: 578 DKAIELNPDYVKAYNNKGSALQNLGQNEEAIECYDKAKE 616
>gi|182677316|ref|YP_001831462.1| hypothetical protein Bind_0319 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633199|gb|ACB93973.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 301
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A GKY+ AIS F Q +K DP A R A +AA++DF AI+ N
Sbjct: 90 TRGVAYAKLGKYSEAISDFSQAIKLDPNNAPAYTNRALAYRQSNRNDAALADFNRAIEVN 149
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R G EA DL +A++ P +A H RG++ + + A+ D
Sbjct: 150 PRHAPAYLGRANLLRVQGNLDEAKSDLDQAIKLNPENAQAFHARGLIYQREGNQPQAITD 209
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ D + Y G +L + G+Y KA E A+ +D +AW L Y+
Sbjct: 210 FDNAIDRDPFAGAPYLARGQSLIATGKYDKAIEDFNAALHVDNKNPDAWAGLGLAYEKSG 269
Query: 566 NSEKALECLQQVLYIDK 582
N KA E Q+ L D
Sbjct: 270 NRTKAAESYQRALTFDP 286
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+E A ++ ++ + NP + EA+ RG A A LG+ EAI D S+A++ +PN+A
Sbjct: 65 QEASANLASLSDVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQAIKLDPNNAPAYTN 124
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R + + +AA+ D + ++++ + AY L G +A+ +AI+L+
Sbjct: 125 RALAYRQSNRNDAALADFNRAIEVNPRHAPAYLGRANLLRVQGNLDEAKSDLDQAIKLNP 184
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+A+ YQ N +A+ + D Y RG L G++ KAI+D
Sbjct: 185 ENAQAFHARGLIYQREGNQPQAITDFDNAIDRDPFAGAPYLARGQSLIATGKYDKAIEDF 244
Query: 609 SSGLGIDPSNIEC 621
++ L +D N +
Sbjct: 245 NAALHVDNKNPDA 257
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 75/176 (42%)
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
E+ + LS + P S++ RG+ K ++ A+ D S +KLD N AYT
Sbjct: 66 EASANLASLSDVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQAIKLDPNNAPAYTNR 125
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
LA A +AI+++ A+ + N ++A L Q + ++
Sbjct: 126 ALAYRQSNRNDAALADFNRAIEVNPRHAPAYLGRANLLRVQGNLDEAKSDLDQAIKLNPE 185
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++A+H RGL+ G +AI D + + DP R A G+Y +A+
Sbjct: 186 NAQAFHARGLIYQREGNQPQAITDFDNAIDRDPFAGAPYLARGQSLIATGKYDKAI 241
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 486 LHERGIV---NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
+H G+ N ++ +A + LS V + + AY G+A + +G+Y +A +
Sbjct: 51 MHGTGVAEVANQSPQEASANLASLSDVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQ 110
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI+LD N A+ + Y+ ++ AL + + ++ R + AY R LL G
Sbjct: 111 AIKLDPNNAPAYTNRALAYRQSNRNDAALADFNRAIEVNPRHAPAYLGRANLLRVQGNLD 170
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+A DL + ++P N + + R Y G +A+
Sbjct: 171 EAKSDLDQAIKLNPENAQAFHARGLIYQREGNQPQAI 207
>gi|440684784|ref|YP_007159579.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428681903|gb|AFZ60669.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 269
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N G Y AI + Q + + + I RG AR+ ++ + AI DF +AI+ +P +A+
Sbjct: 19 NSGDYQGAIENYSQAILLNSEDLTSYISRGVARSLTKDYQNAIEDFNQAIRLSPQYAQAY 78
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG ARAA+GE+ AI+D +A++ P RG +F ++ A+ED S ++
Sbjct: 79 AERGIARAAIGENQTAIEDCHRAIQLNPQYVRAYFGRGAAHFYSGNYQGALEDFSLITRM 138
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
++ S Y LG+ S G + + KA+ +D N + A+ DL + + A
Sbjct: 139 ERSAISYYN-LGILQYSQGINSQVIKHLTKALDIDPNLMSAYYVRGNACYDLGDEQGAFA 197
Query: 573 CLQQV----------LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ +Y + F A + RGL H LG + AI DL
Sbjct: 198 DFAEAKHIESVGADKIYFEDEF--ALYARGLAYHRLGNRENAIADL 241
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ AI++ S+A+ RG+ KD+ A+ED + ++L + AY
Sbjct: 21 GDYQGAIENYSQAILLNSEDLTSYISRGVARSLTKDYQNAIEDFNQAIRLSPQYAQAYAE 80
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYI 580
G+A ++IGE + A E +AIQL+ ++ A+ FY N + ALE + +
Sbjct: 81 RGIARAAIGENQTAIEDCHRAIQLNPQYVRAYFGRGAAHFYS--GNYQGALEDFSLITRM 138
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA-SCY 629
++ Y+L G+L + G + + IK L+ L IDP+ + Y+R +CY
Sbjct: 139 ERSAISYYNL-GILQYSQGINSQVIKHLTKALDIDPNLMSAYYVRGNACY 187
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 519 AYTYLGLA--LSSIGEYKKAEEAHLKAIQLDRNFLEAW------GHLTQFYQDLANSEKA 570
AY Y LA L + G+Y+ A E + +AI L+ L ++ LT+ YQ+ A
Sbjct: 7 AYGYSSLAYILYNSGDYQGAIENYSQAILLNSEDLTSYISRGVARSLTKDYQN------A 60
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
+E Q + + ++++AY RG+ +G+++ AI+D + ++P + + R + +
Sbjct: 61 IEDFNQAIRLSPQYAQAYAERGIARAAIGENQTAIEDCHRAIQLNPQYVRAYFGRGAAHF 120
Query: 631 AIGEYREAV 639
G Y+ A+
Sbjct: 121 YSGNYQGAL 129
>gi|113478145|ref|YP_724206.1| TPR repeat-containing serine/threonine protein kinase
[Trichodesmium erythraeum IMS101]
gi|110169193|gb|ABG53733.1| serine/threonine protein kinase with TPR repeats [Trichodesmium
erythraeum IMS101]
Length = 738
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 146/284 (51%), Gaps = 13/284 (4%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
NK +T ++++ I+ ++ + RG+ G Y SAI + + ++ +P + I R
Sbjct: 431 NKDKAMTDLTQTLRINPNYTQAYKKRGLIYYEIGDYKSAIQDYSESIRLNPKDSKTYINR 490
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G AR + AISD+T+AI+ NP+ +A+ RG++ + + AI++ ++ LE +P+
Sbjct: 491 GIARGALEDQVGAISDYTQAIKLNPNDVKAYYYRGKSLFKMLDYQGAIENYNQFLEVKPD 550
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
AD R + ++A+ D ++++ ++ AY L +A ++GEY++A E
Sbjct: 551 DADAYTNRCSAYLHKGNDSSAIADCQQAIEINPQDFLAYHNLCIAYFNLGEYQRATENCS 610
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANS-----EKALECLQQVLYIDKRFSKAYHLRGLLLH 596
AI +D+N +A+ + + LA S ++A++ + I+ + Y RG++
Sbjct: 611 IAIGIDKNNAKAYTN-----RALAQSARGYLQEAIKDFTTAIEINPQDDLNYSHRGMIFS 665
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L + +AIKD S + ++ +N + Y R H + + A++
Sbjct: 666 VLKNYNQAIKDFSQAIRLNSNNAKAYYNRGVILHKLEDLPAAIV 709
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 121/253 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + + Y AI + +K Y +A R + A++D T+ ++ NP
Sbjct: 388 RGNSYYSHRSYEKAIKDYTAGIKIKANYEDAYYQRALVYYELDNKDKAMTDLTQTLRINP 447
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+K+RG +G+ AIQD S+++ P + RGI +D A+ D
Sbjct: 448 NYTQAYKKRGLIYYEIGDYKSAIQDYSESIRLNPKDSKTYINRGIARGALEDQVGAISDY 507
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KL+ + AY Y G +L + +Y+ A E + + +++ + +A+ + Y N
Sbjct: 508 TQAIKLNPNDVKAYYYRGKSLFKMLDYQGAIENYNQFLEVKPDDADAYTNRCSAYLHKGN 567
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
A+ QQ + I+ + AYH + LG++++A ++ S +GID +N + RA
Sbjct: 568 DSSAIADCQQAIEINPQDFLAYHNLCIAYFNLGEYQRATENCSIAIGIDKNNAKAYTNRA 627
Query: 627 SCYHAIGEYREAV 639
A G +EA+
Sbjct: 628 LAQSARGYLQEAI 640
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 108/214 (50%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+ L +G A Q + +AAI+++TEA++ NP + +RG + + +AI+D +
Sbjct: 349 QTLYKKGQELAKQGKQQAAIANYTEALKLNPKKASIYYKRGNSYYSHRSYEKAIKDYTAG 408
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ + N D ++R +V ++ + + A+ DL+ ++++ AY GL IG+YK
Sbjct: 409 IKIKANYEDAYYQRALVYYELDNKDKAMTDLTQTLRINPNYTQAYKKRGLIYYEIGDYKS 468
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + + ++I+L+ + + + L + A+ Q + ++ KAY+ RG L
Sbjct: 469 AIQDYSESIRLNPKDSKTYINRGIARGALEDQVGAISDYTQAIKLNPNDVKAYYYRGKSL 528
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
+ ++ AI++ + L + P + + R S Y
Sbjct: 529 FKMLDYQGAIENYNQFLEVKPDDADAYTNRCSAY 562
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 93/191 (48%)
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
G+ ++GQ A G+ AI + ++AL+ P A I ++RG + + + A++D +A
Sbjct: 348 GQTLYKKGQELAKQGKQQAAIANYTEALKLNPKKASIYYKRGNSYYSHRSYEKAIKDYTA 407
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+K+ + AY L + KA + ++++ N+ +A+ Y ++ + +
Sbjct: 408 GIKIKANYEDAYYQRALVYYELDNKDKAMTDLTQTLRINPNYTQAYKKRGLIYYEIGDYK 467
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
A++ + + ++ + SK Y RG+ L AI D + + ++P++++ Y R
Sbjct: 468 SAIQDYSESIRLNPKDSKTYINRGIARGALEDQVGAISDYTQAIKLNPNDVKAYYYRGKS 527
Query: 629 YHAIGEYREAV 639
+ +Y+ A+
Sbjct: 528 LFKMLDYQGAI 538
>gi|168705001|ref|ZP_02737278.1| TPR repeat [Gemmata obscuriglobus UQM 2246]
Length = 518
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ R A + E A+ F+ AI P+ E + RG A AA G EA+ D ++A+E
Sbjct: 12 LVRRAHAYTRRAEYPKALEAFSAAIDLEPADAELYFHRGNAYAAAGRHAEAVADFTQAVE 71
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P+ A+ H R + D +AA+ D + V+LD E+ A S + A
Sbjct: 72 LRPDYAEAYHNRATAHVDAGDLDAALADYTRAVELDPEDPDAINGRAAVYSRQKNFDAAF 131
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ A +L + + + + L E A+ L I R ++AY R + L
Sbjct: 132 ADYETAAKLAPDTFRVFFNRANAHSSLNKHEDAVTDYTAALRISPRSARAYLYRAMSLEA 191
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + +A+ DLS+ L + P++ E + RA Y A E+ +AV
Sbjct: 192 LDRTAEALTDLSTALRLQPTSAEAFWQRARVYAACDEHEKAV 233
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG A G++A A++ F Q ++ P Y EA R TA +L+AA++D+T A++
Sbjct: 47 FHRGNAYAAAGRHAEAVADFTQAVELRPDYAEAYHNRATAHVDAGDLDAALADYTRAVEL 106
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P +A R + A D A + P++ + R + AV
Sbjct: 107 DPEDPDAINGRAAVYSRQKNFDAAFADYETAAKLAPDTFRVFFNRANAHSSLNKHEDAVT 166
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D +A +++ + AY Y ++L ++ +A A++L EA+ + Y
Sbjct: 167 DYTAALRISPRSARAYLYRAMSLEALDRTAEALTDLSTALRLQPTSAEAFWQRARVYAAC 226
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
EKA+ +L +D + + A +LRG+ LG+H KA+ D + + IDP+++ +
Sbjct: 227 DEHEKAVADFTWLLKLDPKHADALNLRGVSHAELGEHAKAVADFTRAIAIDPNDVAPWFN 286
Query: 625 R 625
R
Sbjct: 287 R 287
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 14/242 (5%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+ A A++ L+ P EA R A E E A++DFT ++ +P +A R
Sbjct: 194 RTAEALTDLSTALRLQPTSAEAFWQRARVYAACDEHEKAVADFTWLLKLDPKHADALNLR 253
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + A LGE +A+ D ++A+ +PN RG+ + + +D AA++D + ++L +
Sbjct: 254 GVSHAELGEHAKAVADFTRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAPD 313
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK-----A 570
+ +AY G A + E +A +AI L + + F + LAN K A
Sbjct: 314 DPAAYVQRGYAFHELREADRAVADFTRAIDLRPDSGRPY-----FGRALANRRKGDLHAA 368
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL----YLRA 626
+ V+ + + AY+LR L H +G A++D IDP + L ++RA
Sbjct: 369 VADASAVIERNPQSDSAYNLRASLRHQIGDLVGALEDHQKAFEIDPDDAATLNHLAWIRA 428
Query: 627 SC 628
+C
Sbjct: 429 TC 430
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 126/288 (43%), Gaps = 34/288 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA----------- 434
+R A V+ G +A++ + + ++ DP P+A+ GR + Q+ +AA
Sbjct: 82 NRATAHVDAGDLDAALADYTRAVELDPEDPDAINGRAAVYSRQKNFDAAFADYETAAKLA 141
Query: 435 -----------------------ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
++D+T A++ +P + A+ R + AL + EA+ D
Sbjct: 142 PDTFRVFFNRANAHSSLNKHEDAVTDYTAALRISPRSARAYLYRAMSLEALDRTAEALTD 201
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
LS AL +P SA+ +R V + AV D + +KLD ++ A G++ + +G
Sbjct: 202 LSTALRLQPTSAEAFWQRARVYAACDEHEKAVADFTWLLKLDPKHADALNLRGVSHAELG 261
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
E+ KA +AI +D N + W + + +++ A++ + + + AY R
Sbjct: 262 EHAKAVADFTRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAPDDPAAYVQR 321
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G H L + +A+ D + + + P + + RA G+ AV
Sbjct: 322 GYAFHELREADRAVADFTRAIDLRPDSGRPYFGRALANRRKGDLHAAV 369
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ G++A A++ F + + DP RG + R+ +AAI DFT++I+ P
Sbjct: 253 RGVSHAELGEHAKAVADFTRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAP 312
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ +RG A L E+ A+ D ++A++ P+S R + N + D +AAV D
Sbjct: 313 DDPAAYVQRGYAFHELREADRAVADFTRAIDLRPDSGRPYFGRALANRRKGDLHAAVADA 372
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
SA ++ + ++ SAY IG+ A E H KA ++D + HL
Sbjct: 373 SAVIERNPQSDSAYNLRASLRHQIGDLVGALEDHQKAFEIDPDDAATLNHL 423
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++I++D +RG++ +AI F + ++ P P A + RG A RE
Sbjct: 271 TRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAPDDPAAYVQRGYAFHELRE 330
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A++DFT AI P +G + R A G+ A+ D S +E P S + R
Sbjct: 331 ADRAVADFTRAIDLRPDSGRPYFGRALANRRKGDLHAAVADASAVIERNPQSDSAYNLRA 390
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
+ + D A+ED ++D ++ + +L
Sbjct: 391 SLRHQIGDLVGALEDHQKAFEIDPDDAATLNHLA 424
>gi|431808131|ref|YP_007235029.1| hypothetical protein BPP43_07840 [Brachyspira pilosicoli P43/6/78]
gi|430781490|gb|AGA66774.1| TPR domain-containing protein [Brachyspira pilosicoli P43/6/78]
Length = 595
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 96/168 (57%)
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ RG A++ L + EAI+D KA+E PNS++ + RG + A++D +
Sbjct: 352 AYYNRGNAKSDLDYNEEAIKDYDKAIELNPNSSETYNNRGNAKSYLGLYKEAIKDFDKAI 411
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+L+ N AY G S + Y++A + + KAI+L+ N EA+ ++ +L +E+A
Sbjct: 412 ELNPNNSEAYNNRGNIKSYLELYEEAIKDYNKAIELNPNNSEAYNNIGTAKSNLGYNEEA 471
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++ +V+ ++ +S AY+ RG+ H L ++K+AIKD + ++PSN
Sbjct: 472 IKIYDKVIELNPNYSNAYNNRGVSKHKLEKYKEAIKDYDKAIELNPSN 519
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ G Y AI FD+ ++ +P EA RG +++ E AI D+ +AI+ N
Sbjct: 389 NRGNAKSYLGLYKEAIKDFDKAIELNPNNSEAYNNRGNIKSYLELYEEAIKDYNKAIELN 448
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ G A++ LG + EAI+ K +E PN ++ + RG+ K + + A++D
Sbjct: 449 PNNSEAYNNIGTAKSNLGYNEEAIKIYDKVIELNPNYSNAYNNRGVSKHKLEKYKEAIKD 508
Query: 506 LSACVKLDKENKSAYTYLGL 525
++L+ N AY + L
Sbjct: 509 YDKAIELNPSNSDAYFNMVL 528
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 97/182 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ + AI +D+ ++ +P E RG A+++ + AI DF +AI+ N
Sbjct: 355 NRGNAKSDLDYNEEAIKDYDKAIELNPNSSETYNNRGNAKSYLGLYKEAIKDFDKAIELN 414
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG ++ L EAI+D +KA+E PN+++ + G A++
Sbjct: 415 PNNSEAYNNRGNIKSYLELYEEAIKDYNKAIELNPNNSEAYNNIGTAKSNLGYNEEAIKI 474
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ +AY G++ + +YK+A + + KAI+L+ + +A+ ++ Q LA
Sbjct: 475 YDKVIELNPNYSNAYNNRGVSKHKLEKYKEAIKDYDKAIELNPSNSDAYFNMVLPKQLLA 534
Query: 566 NS 567
N+
Sbjct: 535 NT 536
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 48 SLRNWSKAIRILDSLLA-------QSYEIQDIC-----NRAFCYSQLELHKHVIRDCDKA 95
S+ ++K I + D LL + Y+ ++ C NR S L+ ++ I+D DKA
Sbjct: 317 SINYYNKIIEMTDELLKGYDENSEEYYQYKNYCFIAYYNRGNAKSDLDYNEEAIKDYDKA 376
Query: 96 LQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE------HALHQSADLKQFLELEEL 149
++L+P + Y +G A S LG +EA+ ++K E A + ++K +LEL E
Sbjct: 377 IELNPNSSETYNNRGNAKSYLGLYKEAIKDFDKAIELNPNNSEAYNNRGNIKSYLELYE- 435
Query: 150 LTAAKQDRSVTCEYDVSNS---------MSSLTVSESGLNANDKMSETSENH 192
A +D + E + +NS S+L +E + DK+ E + N+
Sbjct: 436 --EAIKDYNKAIELNPNNSEAYNNIGTAKSNLGYNEEAIKIYDKVIELNPNY 485
>gi|406884520|gb|EKD31910.1| hypothetical protein ACD_77C00219G0007 [uncultured bacterium]
Length = 664
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 118/253 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + EGKY AI F+ + + D EA RG A+ + A DF + ++ N
Sbjct: 31 RGRQFLIEGKYTQAIENFNILTQLDTTLYEAYFFRGIAKYNLGDFLGAQIDFDKTLKINQ 90
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ R + +G+ A++DL +A++ P+ + RG+ F + F AV+D
Sbjct: 91 LYTPAYHYRAITLSRIGKYDLALKDLEEAVDLRPSYTGLYFSRGVTYFLSQQFEKAVQDF 150
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ + + AY G + +G+ KA + AI L+R E + ++ Y
Sbjct: 151 NRFLRFEPKVPDAYLNRGASYLFLGDTTKALGDYNTAISLNRFDPEGYIRRSRIYVLQNE 210
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++KALE L Q L +D S Y R L+ + + A+ DL L DP N LY RA
Sbjct: 211 NKKALEDLNQALLLDTANSFGYFNRALVRYNNKEIMGALSDLERVLRDDPGNALTLYNRA 270
Query: 627 SCYHAIGEYREAV 639
IG+Y A+
Sbjct: 271 LIRSQIGDYNNAL 283
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
SRG+ ++ A+ F++ L+ +P P+A + RG + F + A+ D+ AI
Sbjct: 131 FSRGVTYFLSQQFEKAVQDFNRFLRFEPKVPDAYLNRGASYLFLGDTTKALGDYNTAISL 190
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N E + RR + E+ +A++DL++AL + ++ R +V + K+ A+
Sbjct: 191 NRFDPEGYIRRSRIYVLQNENKKALEDLNQALLLDTANSFGYFNRALVRYNNKEIMGALS 250
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DL ++ D N L S IG+Y A E + + I+++ N + A+ + + L
Sbjct: 251 DLERVLRDDPGNALTLYNRALIRSQIGDYNNALEDYDRVIEINPNNVLAYYNRAALFLQL 310
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
A++ Q + + F+ AY R + +GQ A D
Sbjct: 311 GKFRDAMDDYSQAINLYPDFANAYLNRSYVKSQMGQFTSAKSD 353
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+R + + N + A+S +++L++DP L R R+ + A+ D+ I+
Sbjct: 233 FNRALVRYNNKEIMGALSDLERVLRDDPGNALTLYNRALIRSQIGDYNNALEDYDRVIEI 292
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ R LG+ +A+ D S+A+ P+ A+ R V + F +A
Sbjct: 293 NPNNVLAYYNRAALFLQLGKFRDAMDDYSQAINLYPDFANAYLNRSYVKSQMGQFTSAKS 352
Query: 505 DLSACVKLDKENKS 518
D K +E KS
Sbjct: 353 DYEIAQKKIREYKS 366
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 2/154 (1%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R SR NE K A+ +Q L D R R +E+ A+SD ++
Sbjct: 200 RRSRIYVLQNENK--KALEDLNQALLLDTANSFGYFNRALVRYNNKEIMGALSDLERVLR 257
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+P R R+ +G+ A++D + +E PN+ + R + + F A+
Sbjct: 258 DDPGNALTLYNRALIRSQIGDYNNALEDYDRVIEINPNNVLAYYNRAALFLQLGKFRDAM 317
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+D S + L + +AY S +G++ A+
Sbjct: 318 DDYSQAINLYPDFANAYLNRSYVKSQMGQFTSAK 351
>gi|434386918|ref|YP_007097529.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428017908|gb|AFY94002.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 376
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 127/280 (45%), Gaps = 3/280 (1%)
Query: 363 KRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
++N + S++ ++ +F +R IA G AI +D+++K +P +
Sbjct: 64 QKNYTGAIADFSQAIQLAPNFEKAIYNRAIAYDLSGDRQKAIDNYDRVIKLNPQSANSYF 123
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
R A+A + + A+SD+ I+ P + +A+ RG A G+ AI D S+ L +
Sbjct: 124 NRAVAKAKFGDKQGALSDYKRVIEIEPKSTDAYLNRGNLLQASGDITGAIADFSQILNLQ 183
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
PN AD RG+ ++ D A+ D ++ + AY A + +G+ + A
Sbjct: 184 PNRADAYLNRGLAKYQSGDRQGAIADYDLAIEANPTYHLAYNNRAWAKADLGDNRGAMAD 243
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +AIQL+ N+ ++ + L + A+ + + + ++ Y+ RGL +
Sbjct: 244 YDRAIQLNSNYYLSYYSRANLRRTLGDESGAITDYDKSIQLKPDYAFGYNNRGLARRKIQ 303
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A KD + + +DP+ E Y R + A+ E AV
Sbjct: 304 DLAGATKDFTKAIELDPNFAEAYYNRGTARQALKERGGAV 343
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 34/166 (20%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-----------FQR 429
D L+RG+A+ G AI+ +D ++ +P Y A R A+A + R
Sbjct: 187 ADAYLNRGLAKYQSGDRQGAIADYDLAIEANPTYHLAYNNRAWAKADLGDNRGAMADYDR 246
Query: 430 ELE-----------------------AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
++ AI+D+ ++IQ P + RG AR + +
Sbjct: 247 AIQLNSNYYLSYYSRANLRRTLGDESGAITDYDKSIQLKPDYAFGYNNRGLARRKIQDLA 306
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
A +D +KA+E +PN A+ + RG K+ AV DL +L
Sbjct: 307 GATKDFTKAIELDPNFAEAYYNRGTARQALKERGGAVSDLKTAAQL 352
>gi|119357984|ref|YP_912628.1| hypothetical protein Cpha266_2203 [Chlorobium phaeobacteroides DSM
266]
gi|119355333|gb|ABL66204.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
Length = 331
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 121/259 (46%), Gaps = 11/259 (4%)
Query: 374 SKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+ S++ +F ++RG + G Y+ AI + + L+ +P A + RG ++ +
Sbjct: 73 TKAISLNSNFSAAYINRGYVKDATGDYSGAIEDYTKALQINPKEALAYVNRGLSKDSIGD 132
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L AI+D+T+AI+ +P A+ RG A +G A D +KA+E +PN + RG
Sbjct: 133 LPGAIADYTKAIEIDPKNAPAYVNRGITTAKIGTFQNASADFTKAIELQPNMIQAFNNRG 192
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA--HLKAIQLDR 548
KD + A+ D + +++D +N Y G A S I K + KAI+LD
Sbjct: 193 RAKMLMKDLSGAIADFTKAIEIDPKNPIGYFNRGSANSVIILRDKTDAITDFSKAIELDP 252
Query: 549 NFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
NF A+ G+ D+ + + V+ ++ + AY+ RG A+
Sbjct: 253 NFAAAYTGRGNARIMSGDI---NGGIADMTTVIKLNPNDASAYYNRGAFKILNNDKNSAL 309
Query: 606 KDLSSGLGIDPSNIECLYL 624
D + + +DP N E L
Sbjct: 310 ADFNKAIELDPKNAEMYKL 328
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 14/244 (5%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D ++ G +++ Y AI+ + + D +A RG A+ R+ AI D+T+A
Sbjct: 16 DDNVNSGNQKIDANDYLGAIADLTKAIAIDAKNAQAYHDRGYAKKSMRDYSGAIDDYTKA 75
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I N + A+ RG + A G+ AI+D +KAL+ P A RG+ D
Sbjct: 76 ISLNSNFSAAYINRGYVKDATGDYSGAIEDYTKALQINPKEALAYVNRGLSKDSIGDLPG 135
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLT 558
A+ D + +++D +N AY G+ + IG ++ A KAI+L N ++A+ G
Sbjct: 136 AIADYTKAIEIDPKNAPAYVNRGITTAKIGTFQNASADFTKAIELQPNMIQAFNNRGRAK 195
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG-----LLLHGLGQHKKAIKDLSSGLG 613
+DL+ A+ + + ID + Y RG ++L AI D S +
Sbjct: 196 MLMKDLSG---AIADFTKAIEIDPKNPIGYFNRGSANSVIILR---DKTDAITDFSKAIE 249
Query: 614 IDPS 617
+DP+
Sbjct: 250 LDPN 253
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA--FQRELEAAISDFTEAIQ 443
+RG A++ + AI+ F + ++ DP P RG+A + R+ AI+DF++AI+
Sbjct: 190 NRGRAKMLMKDLSGAIADFTKAIEIDPKNPIGYFNRGSANSVIILRDKTDAITDFSKAIE 249
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+P+ A+ RG AR G+ I D++ ++ PN A + RG D N+A+
Sbjct: 250 LDPNFAAAYTGRGNARIMSGDINGGIADMTTVIKLNPNDASAYYNRGAFKILNNDKNSAL 309
Query: 504 EDLSACVKLDKENKSAYTYL 523
D + ++LD +N Y L
Sbjct: 310 ADFNKAIELDPKNAEMYKLL 329
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+D T+AI + +A+ RG A+ ++ + AI D +KA+ N + RG V
Sbjct: 33 GAIADLTKAIAIDAKNAQAYHDRGYAKKSMRDYSGAIDDYTKAISLNSNFSAAYINRGYV 92
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
D++ A+ED + ++++ + AY GL+ SIG+ A + KAI++D
Sbjct: 93 KDATGDYSGAIEDYTKALQINPKEALAYVNRGLSKDSIGDLPGAIADYTKAIEIDPKNAP 152
Query: 553 AW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A+ + F A+ KA+E ++ +A++ RG + AI
Sbjct: 153 AYVNRGITTAKIGTFQNASADFTKAIELQPNMI-------QAFNNRGRAKMLMKDLSGAI 205
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAI 632
D + + IDP N + R S I
Sbjct: 206 ADFTKAIEIDPKNPIGYFNRGSANSVI 232
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+ A+ DL+ + +D +N AY G A S+ +Y A + + KAI L+ NF A+ +
Sbjct: 30 DYLGAIADLTKAIAIDAKNAQAYHDRGYAKKSMRDYSGAIDDYTKAISLNSNFSAAYINR 89
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ A+E + L I+ + + AY RGL +G AI D + + IDP
Sbjct: 90 GYVKDATGDYSGAIEDYTKALQINPKEALAYVNRGLSKDSIGDLPGAIADYTKAIEIDPK 149
Query: 618 NIECLYLRASCYHAIGEYREA 638
N R IG ++ A
Sbjct: 150 NAPAYVNRGITTAKIGTFQNA 170
>gi|91201109|emb|CAJ74168.1| hypothetical protein kuste3406 [Candidatus Kuenenia
stuttgartiensis]
Length = 610
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 126/256 (49%), Gaps = 1/256 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G +++ Y A+ +++ + P PEA + + + E AI A+QS
Sbjct: 33 INKGNILIHKQNYQDALHEYERAISLKPDAPEAWYNKAAVLDYMGDFERAIEAADMAVQS 92
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW +G+A G+ EAI+ KALE +P++ +L+ +G V+ D A+V+
Sbjct: 93 KPDYWEAWYMKGRASDHTGKYYEAIKAFDKALEIKPDALMVLYNKGNVHDHIGDIEASVK 152
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKK-AEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ +KL + A+ GLAL+ I E + A EA+ +AI+++ + EAW + +
Sbjct: 153 TYDSILKLKPDEYEAWNNKGLALARIPEKRGIALEAYDQAIRINPVYYEAWINKGNCFVR 212
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L +A++ + I + A+ +G L +G+H++A+ + + + P +
Sbjct: 213 LRRYGEAIDAYDTAIKIRPKEHAAWANKGFTLADMGKHEEAVDAFNKAIELSPGSYAAWN 272
Query: 624 LRASCYHAIGEYREAV 639
+ ++ Y +A+
Sbjct: 273 GKGLALDSLSRYEDAL 288
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 12/252 (4%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A++ +++ L P E + +G AI F AI+ P EAWK +G A
Sbjct: 321 AVAAYEKALIIQPDSYETMTNKGCELFHLGNYVEAIKAFDRAIELQPDYAEAWKNKGNAL 380
Query: 460 AALGESVEAIQDLSKALEF--------EPNSADI----LHERGIVNFKFKDFNAAVEDLS 507
A +G EA + +K + P + I L GI + + AV +
Sbjct: 381 ARMGWLEEATESFAKVGQIITDEEAVNVPRLSKIKLEALQNNGIALIRLNKYADAVNVYN 440
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+++ ++ + G++ S + EY++A A KA L+ N EA+ + +++
Sbjct: 441 NALRIKNDDFDVWMNKGISHSFLNEYEEALTAFDKAALLESNAYEAFNYKGYVLEEMGKY 500
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
++AL+ L + F +A + +GLLL +G H+ A+K ++ L I+P L+ +A
Sbjct: 501 QEALDAYDNALRLKPDFPEAMNNKGLLLDNIGNHEDAVKMYNNALRINPDFDAVLFNKAC 560
Query: 628 CYHAIGEYREAV 639
+ EA+
Sbjct: 561 ALSLLSRKEEAL 572
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 26/311 (8%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVD-----FRLSRGI--AQVNEG-------KYASA 400
LK EA NK + RI + + I+++ R++ A +N+G +Y A
Sbjct: 160 LKPDEYEAWNNKGLALARIPEKRGIALEAYDQAIRINPVYYEAWINKGNCFVRLRRYGEA 219
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I +D +K P A +G A + E A+ F +AI+ +P + AW +G A
Sbjct: 220 IDAYDTAIKIRPKEHAAWANKGFTLADMGKHEEAVDAFNKAIELSPGSYAAWNGKGLALD 279
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+L +A++ K +E +P+S G+ + K + AV + + ++
Sbjct: 280 SLSRYEDALKAYEKTIEIQPDSYGAWTNMGLTLSRLKRHDEAVAAYEKALIIQPDSYETM 339
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
T G L +G Y +A +A +AI+L ++ EAW + + E+A E +V I
Sbjct: 340 TNKGCELFHLGNYVEAIKAFDRAIELQPDYAEAWKNKGNALARMGWLEEATESFAKVGQI 399
Query: 581 --------DKRFSK----AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
R SK A G+ L L ++ A+ ++ L I + + +
Sbjct: 400 ITDEEAVNVPRLSKIKLEALQNNGIALIRLNKYADAVNVYNNALRIKNDDFDVWMNKGIS 459
Query: 629 YHAIGEYREAV 639
+ + EY EA+
Sbjct: 460 HSFLNEYEEAL 470
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 12/243 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-- 443
++G + G Y AI FD+ ++ P Y EA +G A A LE A F + Q
Sbjct: 341 NKGCELFHLGNYVEAIKAFDRAIELQPDYAEAWKNKGNALARMGWLEEATESFAKVGQII 400
Query: 444 ------SNPSAG----EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+ P EA + G A L + +A+ + AL + + D+ +GI +
Sbjct: 401 TDEEAVNVPRLSKIKLEALQNNGIALIRLNKYADAVNVYNNALRIKNDDFDVWMNKGISH 460
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ A+ L+ A+ Y G L +G+Y++A +A+ A++L +F EA
Sbjct: 461 SFLNEYEEALTAFDKAALLESNAYEAFNYKGYVLEEMGKYQEALDAYDNALRLKPDFPEA 520
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ ++ N E A++ L I+ F + L L + ++A+ L +
Sbjct: 521 MNNKGLLLDNIGNHEDAVKMYNNALRINPDFDAVLFNKACALSLLSRKEEALDSLEKAVQ 580
Query: 614 IDP 616
++P
Sbjct: 581 LNP 583
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 24 DELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLL-AQSYEIQDICNRAFCYSQL 82
D+ +R++ V A + LR + +AI D+ + + E N+ F + +
Sbjct: 190 DQAIRINPVYYEAWINKGNC--FVRLRRYGEAIDAYDTAIKIRPKEHAAWANKGFTLADM 247
Query: 83 ELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
H+ + +KA++L P A+ KG A +L R E+AL +EK E
Sbjct: 248 GKHEEAVDAFNKAIELSPGSYAAWNGKGLALDSLSRYEDALKAYEKTIE 296
>gi|434382555|ref|YP_006704338.1| TPR repeat-containing protein [Brachyspira pilosicoli WesB]
gi|404431204|emb|CCG57250.1| TPR repeat-containing protein [Brachyspira pilosicoli WesB]
Length = 412
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 120/233 (51%), Gaps = 1/233 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N G + I +D+ ++ Y +A RG A+ + AI D+ + I+ +
Sbjct: 164 NRGLARSNLGFFKKTIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELD 223
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG ++ L EAI+D +K LE EPN+ RG + A++D
Sbjct: 224 TNNIDAY-NRGVSKNYLELFDEAIKDFNKILELEPNNYCAYGNRGNSKNDLGLYKEALKD 282
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ + + Y GL S+G YK+A + + KAI+L ++ A+G+ +L
Sbjct: 283 YDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELG 342
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++A+E + + ++ + Y+ RG + G +K+A+KD L +DP+N
Sbjct: 343 QYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKDYKKALELDPNN 395
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 130/256 (50%), Gaps = 5/256 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+ G+A N G Y AI + + + Y A RG AR+ + I D+ +AI+ +
Sbjct: 130 TNGVALNNMGSYQYAIDKYSEAIDLIDYYALAYYNRGLARSNLGFFKKTIKDYDKAIELS 189
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG A+ G EAI+D +K +E + N+ D + RG+ + F+ A++D
Sbjct: 190 KNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDTNNIDA-YNRGVSKNYLELFDEAIKD 248
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
+ ++L+ N AY G + + +G YK+A + + K+I+L+ N + + LT++
Sbjct: 249 FNKILELEPNNYCAYGNRGNSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKY--S 306
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L ++A++ + + + ++ AY RG LGQ+K+AI+D + ++P+
Sbjct: 307 LGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYKEAIEDYDKAIELEPNTAYLYN 366
Query: 624 LRASCYHAIGEYREAV 639
R G Y+EA+
Sbjct: 367 DRGWVKKNAGLYKEAL 382
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++ + G Y A+ +D+ ++ +P RG + + AI D+T+AI+
Sbjct: 265 NRGNSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELT 324
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ LG+ EAI+D KA+E EPN+A + ++RG V + A++D
Sbjct: 325 PDYTNAYGNRGSAKDELGQYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKD 384
Query: 506 LSACVKLDKENKSA 519
++LD N+ A
Sbjct: 385 YKKALELDPNNEYA 398
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR L L+K I+D KA++L P AY +G A LG+ +EA+ ++K E
Sbjct: 299 NRGLTKYSLGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYKEAIEDYDKAIE 356
>gi|427710065|ref|YP_007052442.1| pentapeptide repeat-containing protein [Nostoc sp. PCC 7107]
gi|427362570|gb|AFY45292.1| pentapeptide repeat protein [Nostoc sp. PCC 7107]
Length = 575
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 4/221 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG AQ Y +AI+ +++ ++ DP Y +A RG R Q + +A++DF +AI+ +
Sbjct: 327 SRGFAQSKLKNYQAAIADYNKAIEIDPNYGKAYSNRGLTRIEQNDYPSALTDFDQAIRLD 386
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ EA+ R R + I + S+A+ P A + RG+ +D+ +A++D
Sbjct: 387 SNNAEAYNGRATIRRMQKDYAAVITEASQAIRINPKFAAAYNNRGLARSALQDYQSAIQD 446
Query: 506 LSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ D + A+ YL GLA S+I ++K A + +AI++D N++EA+ + +
Sbjct: 447 YDKAI--DNSSGWAWAYLNRGLARSAISQHKDATKDFDRAIEIDENYIEAYYQRSVARFN 504
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
E A++ +++ D ++ AY +G L L + +A
Sbjct: 505 RKKYEDAIKDCDRIIQRDPNYAAAYENKGNALLALKKKPEA 545
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 117/246 (47%), Gaps = 34/246 (13%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+Y +AI+ +++ ++ + + RG A++ + +AAI+D+ +AI+ +P+ G+A+
Sbjct: 301 KGRYPNAIAYYNKAIELNSRDAQTYTSRGFAQSKLKNYQAAIADYNKAIEIDPNYGKAYS 360
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG R + A+ D +A+ + N+A+ + R + KD+ A + + S ++++
Sbjct: 361 NRGLTRIEQNDYPSALTDFDQAIRLDSNNAEAYNGRATIRRMQKDYAAVITEASQAIRIN 420
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ +AY GLA S++ +Y+ A + + KAI D + AW +L
Sbjct: 421 PKFAAAYNNRGLARSALQDYQSAIQDYDKAI--DNSSGWAWAYLN--------------- 463
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
RGL + QHK A KD + ID + IE Y R+
Sbjct: 464 -----------------RGLARSAISQHKDATKDFDRAIEIDENYIEAYYQRSVARFNRK 506
Query: 634 EYREAV 639
+Y +A+
Sbjct: 507 KYEDAI 512
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK--R 454
YA+ I+ Q ++ +P + A RG AR+ ++ ++AI D+ +AI + S+G AW
Sbjct: 406 YAAVITEASQAIRINPKFAAAYNNRGLARSALQDYQSAIQDYDKAIDN--SSGWAWAYLN 463
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG AR+A+ + +A +D +A+E + N + ++R + F K + A++D ++ D
Sbjct: 464 RGLARSAISQHKDATKDFDRAIEIDENYIEAYYQRSVARFNRKKYEDAIKDCDRIIQRDP 523
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+AY G AL ++ + +A+ A +A++L
Sbjct: 524 NYAAAYENKGNALLALKKKPEAKLAFEQAMKL 555
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+A+ ++ A FD+ ++ D Y EA R AR +++ E AI D IQ
Sbjct: 462 LNRGLARSAISQHKDATKDFDRAIEIDENYIEAYYQRSVARFNRKKYEDAIKDCDRIIQR 521
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+P+ A++ +G A AL + EA +A++
Sbjct: 522 DPNYAAAYENKGNALLALKKKPEAKLAFEQAMKL 555
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLL 63
+R N + + D+ +R+DS A A R + ++ + S+AIRI +
Sbjct: 365 TRIEQNDYPSALTDFDQAIRLDSNNAEAYNGRATIRRMQKDYAAVITEASQAIRI-NPKF 423
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
A +Y NR S L+ ++ I+D DKA+ AY+ +G A SA+ + ++A
Sbjct: 424 AAAYN-----NRGLARSALQDYQSAIQDYDKAIDNSSGWAWAYLNRGLARSAISQHKDAT 478
Query: 124 SVWEKGYE 131
+++ E
Sbjct: 479 KDFDRAIE 486
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y+ G LSS G Y A + KAI+L+ + + L N + A+ + +
Sbjct: 291 YSRWGNTLSSKGRYPNAIAYYNKAIELNSRDAQTYTSRGFAQSKLKNYQAAIADYNKAIE 350
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
ID + KAY RGL + A+ D + +D +N E RA+ +Y AV
Sbjct: 351 IDPNYGKAYSNRGLTRIEQNDYPSALTDFDQAIRLDSNNAEAYNGRATIRRMQKDY-AAV 409
Query: 640 I 640
I
Sbjct: 410 I 410
>gi|166365168|ref|YP_001657441.1| hypothetical protein MAE_24270 [Microcystis aeruginosa NIES-843]
gi|425465366|ref|ZP_18844675.1| Periplasmic protein [Microcystis aeruginosa PCC 9809]
gi|166087541|dbj|BAG02249.1| periplasmic protein [Microcystis aeruginosa NIES-843]
gi|389832406|emb|CCI24007.1| Periplasmic protein [Microcystis aeruginosa PCC 9809]
Length = 260
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL N + L R V++ K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINSNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFL-EAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G + +A E + KA+ L DR F A H E AL + L I+
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFYNRALAH-----NRAGQQEMALRDYNESLKINAN 204
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDL 608
F++AYH RGL + LG +KAI DL
Sbjct: 205 FAEAYHNRGLTYYKLGNREKAIADL 229
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A++ G+Y AI+ + Q L + Y AL R ++ EAA+ D T+A
Sbjct: 69 DAYYNRGYAELVLGQYERAIADYTQALTINSNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
I N + + + RG A+ LG +EAI+D +KAL + I + R + + +
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAHNRAGQQ 188
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ + E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINSNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGE 634
RG LG+H +AI+D + L + + + Y RA ++ G+
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAHNRAGQ 187
>gi|333987462|ref|YP_004520069.1| hypothetical protein MSWAN_1251 [Methanobacterium sp. SWAN-1]
gi|333825606|gb|AEG18268.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 1161
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 37/292 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G+A N K AI +D +K DP Y +AL +GT E + AI F +A++
Sbjct: 62 FYKGLALQNLKKIDEAIKCYDNAIKTDPNYSKALNNKGTLLTKISEYDKAIKCFDKALKI 121
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-------------- 490
+P E +G A LG EAI+ +KA+ +EP + L+ +G
Sbjct: 122 DPDYAEVHNNKGLALGYLGRYEEAIKSFNKAINYEPKNIIFLYNKGELLRNLKRYEEAIE 181
Query: 491 ----IVNFKFKDFNAAVEDLSACVKLDKENKS-------------------AYTYLGLAL 527
I+N K F+A + + L+K ++S Y+ GL+L
Sbjct: 182 SYDRIINIKNDFFDAILNKGISLAHLEKYDESIEYFDKLIELNPNSPFIHIVYSNKGLSL 241
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
++ Y++A + K+I+L+ EAW + ++ L ++A+E ++ L I + +
Sbjct: 242 GNLERYEEAIKYLDKSIELNSENAEAWFNKGVIFETLGKYDEAIEYYEKALEIAPDLALS 301
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
YH +L LG++++AIK + +D N E + + +G + E++
Sbjct: 302 YHRISEILRILGKYEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRFEESI 353
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 137/270 (50%), Gaps = 5/270 (1%)
Query: 375 KSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ KSI++D F S+G++ + G++ +I+ FD+ L +P + +A + + R
Sbjct: 322 QDKSIALDSKNAEFWFSKGLSLSDLGRFEESINPFDKALNINPNFSDAYSAKCASLRNLR 381
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E A++ AI+ NP++ E W +G + L E+I+ ++A+ A + +
Sbjct: 382 KNEDALNCINTAIEFNPNSPELWFNKGLSLIDLKRYEESIRCFNEAVTLNHKFALAYNSK 441
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G FN A++ + + +D ++A+ G++ ++G+Y+KA E +A++++
Sbjct: 442 GFSLNHLDKFNEAIKCFNRALNIDSTLETAFNNKGISHLALGQYEKALECFNEALRINPY 501
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
F E + + ++ + +EC + L +++ +A++ +G L LG++ ++I +
Sbjct: 502 FTEVYVNKGSALGNMEEYNEEIECYDKALELNQYIFEAWYNKGSALSNLGKYNESINCFN 561
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ I+P+ E + + +G++ A+
Sbjct: 562 QSIEINPNYGEVYNNKGVSFENLGKFNHAI 591
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 90/169 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI+ + G+Y A+ F++ L+ +P + E + +G+A E I + +A++ N
Sbjct: 474 NKGISHLALGQYEKALECFNEALRINPYFTEVYVNKGSALGNMEEYNEEIECYDKALELN 533
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EAW +G A + LG+ E+I ++++E PN ++ + +G+ FN A++
Sbjct: 534 QYIFEAWYNKGSALSNLGKYNESINCFNQSIEINPNYGEVYNNKGVSFENLGKFNHAIKC 593
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
++LD + GL L+ IG+Y++ E+ A+++ +F EA+
Sbjct: 594 FDKALELDSTLFITHVNKGLVLAKIGKYERGIESCNNALKIQSDFAEAY 642
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 118/245 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI D+ + D E +G + + E +I+ F +A+ NP+ +A+
Sbjct: 313 GKYEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRFEESINPFDKALNINPNFSDAYSA 372
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ + L ++ +A+ ++ A+EF PNS ++ +G+ K + ++ + V L+
Sbjct: 373 KCASLRNLRKNEDALNCINTAIEFNPNSPELWFNKGLSLIDLKRYEESIRCFNEAVTLNH 432
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY G +L+ + ++ +A + +A+ +D A+ + + L EKALEC
Sbjct: 433 KFALAYNSKGFSLNHLDKFNEAIKCFNRALNIDSTLETAFNNKGISHLALGQYEKALECF 492
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ L I+ F++ Y +G L + ++ + I+ L ++ E Y + S +G+
Sbjct: 493 NEALRINPYFTEVYVNKGSALGNMEEYNEEIECYDKALELNQYIFEAWYNKGSALSNLGK 552
Query: 635 YREAV 639
Y E++
Sbjct: 553 YNESI 557
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 39/306 (12%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI---GRGTARAFQ 428
RI K+ D L++GI+ + KY +I FD++++ +P P I +G +
Sbjct: 185 RIINIKNDFFDAILNKGISLAHLEKYDESIEYFDKLIELNPNSPFIHIVYSNKGLSLGNL 244
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E AI ++I+ N EAW +G LG+ EAI+ KALE P+ A H
Sbjct: 245 ERYEEAIKYLDKSIELNSENAEAWFNKGVIFETLGKYDEAIEYYEKALEIAPDLALSYHR 304
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ + A++ + LD +N + GL+LS +G ++++ KA+ ++
Sbjct: 305 ISEILRILGKYEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRFEESINPFDKALNINP 364
Query: 549 NFLEA----------------------------------WGHLTQFYQDLANSEKALECL 574
NF +A W + DL E+++ C
Sbjct: 365 NFSDAYSAKCASLRNLRKNEDALNCINTAIEFNPNSPELWFNKGLSLIDLKRYEESIRCF 424
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH-AIG 633
+ + ++ +F+ AY+ +G L+ L + +AIK + L ID S +E + H A+G
Sbjct: 425 NEAVTLNHKFALAYNSKGFSLNHLDKFNEAIKCFNRALNID-STLETAFNNKGISHLALG 483
Query: 634 EYREAV 639
+Y +A+
Sbjct: 484 QYEKAL 489
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/270 (18%), Positives = 129/270 (47%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ + S + ++G++ ++ +Y +I F++ + + + A +G +
Sbjct: 389 CINTAIEFNPNSPELWFNKGLSLIDLKRYEESIRCFNEAVTLNHKFALAYNSKGFSLNHL 448
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ AI F A+ + + A+ +G + ALG+ +A++ ++AL P ++
Sbjct: 449 DKFNEAIKCFNRALNIDSTLETAFNNKGISHLALGQYEKALECFNEALRINPYFTEVYVN 508
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G +++N +E ++L++ A+ G ALS++G+Y ++ ++I+++
Sbjct: 509 KGSALGNMEEYNEEIECYDKALELNQYIFEAWYNKGSALSNLGKYNESINCFNQSIEINP 568
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N+ E + + +++L A++C + L +D + +GL+L +G++++ I+
Sbjct: 569 NYGEVYNNKGVSFENLGKFNHAIKCFDKALELDSTLFITHVNKGLVLAKIGKYERGIESC 628
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREA 638
++ L I E + + + +Y +A
Sbjct: 629 NNALKIQSDFAEAYMGKGIIFLTLHKYNDA 658
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 124/263 (47%), Gaps = 3/263 (1%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++ F ++G N +Y AI +D+I+ + +A++ +G + A + + +I F
Sbjct: 159 NIIFLYNKGELLRNLKRYEEAIESYDRIINIKNDFFDAILNKGISLAHLEKYDESIEYFD 218
Query: 440 EAIQSNPSAGE---AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ I+ NP++ + +G + L EAI+ L K++E +A+ +G++
Sbjct: 219 KLIELNPNSPFIHIVYSNKGLSLGNLERYEEAIKYLDKSIELNSENAEAWFNKGVIFETL 278
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
++ A+E +++ + +Y + L +G+Y++A + K+I LD E W
Sbjct: 279 GKYDEAIEYYEKALEIAPDLALSYHRISEILRILGKYEEAIKYQDKSIALDSKNAEFWFS 338
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
DL E+++ + L I+ FS AY + L L +++ A+ +++ + +P
Sbjct: 339 KGLSLSDLGRFEESINPFDKALNINPNFSDAYSAKCASLRNLRKNEDALNCINTAIEFNP 398
Query: 617 SNIECLYLRASCYHAIGEYREAV 639
++ E + + + Y E++
Sbjct: 399 NSPELWFNKGLSLIDLKRYEESI 421
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 79/143 (55%), Gaps = 1/143 (0%)
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
KD+ A++ ++L ++ K A+ Y GLAL ++ + +A + + AI+ D N+ +A +
Sbjct: 39 KDYKRAIDVFDKIIQLTQDPK-AWFYKGLALQNLKKIDEAIKCYDNAIKTDPNYSKALNN 97
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++ +KA++C + L ID +++ ++ +GL L LG++++AIK + + +P
Sbjct: 98 KGTLLTKISEYDKAIKCFDKALKIDPDYAEVHNNKGLALGYLGRYEEAIKSFNKAINYEP 157
Query: 617 SNIECLYLRASCYHAIGEYREAV 639
NI LY + + Y EA+
Sbjct: 158 KNIIFLYNKGELLRNLKRYEEAI 180
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 44/252 (17%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
++ + AI F + IQ +AW +G A L + EAI+ A++ +PN + L+
Sbjct: 38 NKDYKRAIDVFDKIIQLTQDP-KAWFYKGLALQNLKKIDEAIKCYDNAIKTDPNYSKALN 96
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G + K +++ A++ +K+D + + GLAL +G Y++A ++ KAI +
Sbjct: 97 NKGTLLTKISEYDKAIKCFDKALKIDPDYAEVHNNKGLALGYLGRYEEAIKSFNKAINYE 156
Query: 548 RN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA----------------- 587
FL G L ++L E+A+E +++ I F A
Sbjct: 157 PKNIIFLYNKGELL---RNLKRYEEAIESYDRIINIKNDFFDAILNKGISLAHLEKYDES 213
Query: 588 --------------------YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
Y +GL L L ++++AIK L + ++ N E + +
Sbjct: 214 IEYFDKLIELNPNSPFIHIVYSNKGLSLGNLERYEEAIKYLDKSIELNSENAEAWFNKGV 273
Query: 628 CYHAIGEYREAV 639
+ +G+Y EA+
Sbjct: 274 IFETLGKYDEAI 285
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 17/198 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A N GKY +I+ F+Q ++ +P Y E +G + + AI F +A++ +
Sbjct: 542 NKGSALSNLGKYNESINCFNQSIEINPNYGEVYNNKGVSFENLGKFNHAIKCFDKALELD 601
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +G A +G+ I+ + AL+ + + A+ +GI+ +N A +
Sbjct: 602 STLFITHVNKGLVLAKIGKYERGIESCNNALKIQSDFAEAYMGKGIIFLTLHKYNDAKYE 661
Query: 506 LSACVKLD------KENKSAYTYLGLALSS---IGEYKKAEEAHLKAIQLDRNFLEAWGH 556
L + K+ K AY Y L ++S I E +K E + + + +
Sbjct: 662 LKIAENIFNEKNELKQAKEAYNYKLLTVNSSNLISELEKLEMEFISCLHFE--------N 713
Query: 557 LTQFYQDLANSEKALECL 574
L F +D+ N K + L
Sbjct: 714 LDDFRKDVFNVFKGINAL 731
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 20/196 (10%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLRNWSKAIRILDSLL---AQSYE 68
L + + I D ++ + + AI + I LA L + ++I D L+ S
Sbjct: 173 LKRYEEAIESYDRIINIKNDFFDAILNKGISLA---HLEKYDESIEYFDKLIELNPNSPF 229
Query: 69 IQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
I + N+ LE ++ I+ DK+++L+ +A+ KG F LG+ +EA+ +E
Sbjct: 230 IHIVYSNKGLSLGNLERYEEAIKYLDKSIELNSENAEAWFNKGVIFETLGKYDEAIEYYE 289
Query: 128 KGYEHALHQSADLKQFLELEELLTAAK-----QDRSV-----TCEYDVSN--SMSSLTVS 175
K E A + + E+ +L + QD+S+ E+ S S+S L
Sbjct: 290 KALEIAPDLALSYHRISEILRILGKYEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRF 349
Query: 176 ESGLNANDKMSETSEN 191
E +N DK + N
Sbjct: 350 EESINPFDKALNINPN 365
>gi|428213339|ref|YP_007086483.1| hypothetical protein Oscil6304_2964 [Oscillatoria acuminata PCC
6304]
gi|428001720|gb|AFY82563.1| TPR repeat-containing protein [Oscillatoria acuminata PCC 6304]
Length = 580
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 124/258 (48%), Gaps = 4/258 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ +Y A++ FD++++ P P +G A Q +EAAI F +AI+
Sbjct: 250 FNRGVTLEKLQRYTDAVASFDRVIQFAPSNPLVWFYKGRALKHQ-WVEAAIGCFDKAIEL 308
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ EAW RG A + G+ A+ +A + PN + RG+ + + A++
Sbjct: 309 HPNWPEAWMNRGIALSDAGQYEVALSSFDQATKINPNLSTAWLGRGMALYGLGRYKDAIQ 368
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL---EAWGHLTQFY 561
LS +++ A+ + GLAL + Y++A A+ K +Q+ + + +W ++
Sbjct: 369 ALSNAIQIQPNFPEAWYHRGLALEQLQRYEEALTAYEKVVQVTQEPMFRYRSWVKRSEVL 428
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ L +AL+ +VL + ++A+ RG LL ++ AI + I P++ +
Sbjct: 429 EKLERYPEALDAFAKVLEVKPNDAQAWMKRGDLLSLAQRYIDAIVAYDQAIAIWPNHYDP 488
Query: 622 LYLRASCYHAIGEYREAV 639
R IG+Y +A+
Sbjct: 489 WMKRGRVLSKIGQYPQAI 506
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 9/246 (3%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+AI FD+ ++ P +PEA + RG A + + E A+S F +A + NP+ AW RG A
Sbjct: 297 AAIGCFDKAIELHPNWPEAWMNRGIALSDAGQYEVALSSFDQATKINPNLSTAWLGRGMA 356
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
LG +AIQ LS A++ +PN + + RG+ + + + A+ V++ +E
Sbjct: 357 LYGLGRYKDAIQALSNAIQIQPNFPEAWYHRGLALEQLQRYEEALTAYEKVVQVTQEPMF 416
Query: 519 AYTYL---GLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALE 572
Y L + Y +A +A K +++ N +AW G L Q + A+
Sbjct: 417 RYRSWVKRSEVLEKLERYPEALDAFAKVLEVKPNDAQAWMKRGDLLSLAQRYID---AIV 473
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
Q + I + RG +L +GQ+ +AI + + + P++ R C +
Sbjct: 474 AYDQAIAIWPNHYDPWMKRGRVLSKIGQYPQAIAAYDTVIQMKPTHSPAWLRRGECLEKL 533
Query: 633 GEYREA 638
Y EA
Sbjct: 534 HRYPEA 539
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 16/263 (6%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
FR R + ++ + K +A++ F++++K P RG + A++ +A+
Sbjct: 149 FR-GRSLLELQQSK--AAVTAFNKVVKLKPKLSSGWYYRGLTFLSLDRPDLALTSLEQAV 205
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+P AW +G A EA+ + L+ P +A RG+ K + + A
Sbjct: 206 ALDPQNPAAWFNQGVALDRQQRYAEAVAAYDRTLQLVPENAASWFNRGVTLEKLQRYTDA 265
Query: 503 VEDLSACVKLDKENKSAYTYLGLAL------SSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
V ++ N + Y G AL ++IG + KAI+L N+ EAW +
Sbjct: 266 VASFDRVIQFAPSNPLVWFYKGRALKHQWVEAAIGCFD-------KAIELHPNWPEAWMN 318
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
D E AL Q I+ S A+ RG+ L+GLG++K AI+ LS+ + I P
Sbjct: 319 RGIALSDAGQYEVALSSFDQATKINPNLSTAWLGRGMALYGLGRYKDAIQALSNAIQIQP 378
Query: 617 SNIECLYLRASCYHAIGEYREAV 639
+ E Y R + Y EA+
Sbjct: 379 NFPEAWYHRGLALEQLQRYEEAL 401
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 16/265 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQ 443
++G+A + +YA A++ +D+ L+ P + RG T QR + A++ F IQ
Sbjct: 216 FNQGVALDRQQRYAEAVAAYDRTLQLVPENAASWFNRGVTLEKLQRYTD-AVASFDRVIQ 274
Query: 444 SNPSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
PS W +G RA + VE AI KA+E PN + RGI + A
Sbjct: 275 FAPSNPLVWFYKG--RALKHQWVEAAIGCFDKAIELHPNWPEAWMNRGIALSDAGQYEVA 332
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH------ 556
+ K++ +A+ G+AL +G YK A +A AIQ+ NF EAW H
Sbjct: 333 LSSFDQATKINPNLSTAWLGRGMALYGLGRYKDAIQALSNAIQIQPNFPEAWYHRGLALE 392
Query: 557 -LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
L ++ + L EK ++ Q+ ++ + + K R +L L ++ +A+ + L +
Sbjct: 393 QLQRYEEALTAYEKVVQVTQEPMFRYRSWVK----RSEVLEKLERYPEALDAFAKVLEVK 448
Query: 616 PSNIECLYLRASCYHAIGEYREAVI 640
P++ + R Y +A++
Sbjct: 449 PNDAQAWMKRGDLLSLAQRYIDAIV 473
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 125/321 (38%), Gaps = 69/321 (21%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + YA A++ +D+ +++ P AL+ RGTA E AI+ + AIQ NP
Sbjct: 48 RGNRLYEQKNYAGAVAFYDKAIQKKPTMHRALLKRGTALMNLHRYEEAIAGYDGAIQVNP 107
Query: 447 ----------------------------------SAGEAWKRRGQARAALGESVEAIQDL 472
+ EAW RG++ L +S A+
Sbjct: 108 DDYWGWTFRGRCLFHLNRYQEALASFDQSIQINSNQYEAWYFRGRSLLELQQSKAAVTAF 167
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+K ++ +P + + RG+ + A+ L V LD +N +A+ G+AL
Sbjct: 168 NKVVKLKPKLSSGWYYRGLTFLSLDRPDLALTSLEQAVALDPQNPAAWFNQGVALDRQQR 227
Query: 533 YKKAEEAHLKAIQLDRNFLEAW-----------------------------GHLTQFYQD 563
Y +A A+ + +QL +W L FY+
Sbjct: 228 YAEAVAAYDRTLQLVPENAASWFNRGVTLEKLQRYTDAVASFDRVIQFAPSNPLVWFYKG 287
Query: 564 LA----NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
A E A+ C + + + + +A+ RG+ L GQ++ A+ I+P N+
Sbjct: 288 RALKHQWVEAAIGCFDKAIELHPNWPEAWMNRGIALSDAGQYEVALSSFDQATKINP-NL 346
Query: 620 ECLYL-RASCYHAIGEYREAV 639
+L R + +G Y++A+
Sbjct: 347 STAWLGRGMALYGLGRYKDAI 367
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 11/240 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RGIA + G+Y A+S FDQ K +P A +GRG A + AI + AIQ
Sbjct: 317 MNRGIALSDAGQYEVALSSFDQATKINPNLSTAWLGRGMALYGLGRYKDAIQALSNAIQI 376
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILHERGIVNF-----KFK 497
P+ EAW RG A L EA+ K ++ EP + R V K +
Sbjct: 377 QPNFPEAWYHRGLALEQLQRYEEALTAYEKVVQVTQEP----MFRYRSWVKRSEVLEKLE 432
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A++ + +++ + A+ G LS Y A A+ +AI + N + W
Sbjct: 433 RYPEALDAFAKVLEVKPNDAQAWMKRGDLLSLAQRYIDAIVAYDQAIAIWPNHYDPWMKR 492
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ + +A+ V+ + S A+ RG L L ++ +A + L +DP+
Sbjct: 493 GRVLSKIGQYPQAIAAYDTVIQMKPTHSPAWLRRGECLEKLHRYPEAARSYGVALEVDPT 552
>gi|414075696|ref|YP_006995014.1| hypothetical protein ANA_C10400 [Anabaena sp. 90]
gi|413969112|gb|AFW93201.1| tetratricopeptide repeat-containing protein [Anabaena sp. 90]
Length = 280
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 5/211 (2%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ R SK+ V +G Q +G Y +AI+ + + + +P Y A GRG
Sbjct: 53 IGRTSKAGEFYV-----QGQTQHLKGNYQAAIAAYSKSISLNPQYAPAFKGRGLVYFDTG 107
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E AI+D+ +A+ N EA+ R A ++G+ AI D ++A+ P A++ + R
Sbjct: 108 NKEGAIADYNQALGLNSQDAEAYNNRANAFVSIGDYRRAIADYNQAISIAPKYAEVYNNR 167
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G D NAA+ED + ++++KE AY G A +S GE +KA + +A++++ N
Sbjct: 168 GNARANQGDKNAALEDYTQAIRINKEYAVAYNNRGNAYASRGEPQKAISDYNEAVRINPN 227
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
F A+ + Y + + AL+ LQ+ I
Sbjct: 228 FGAAFNNRGNAYAAIGDKRGALKDLQRAAAI 258
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AGE + + GQ + G AI SK++ P A RG+V F + A+ D +
Sbjct: 59 AGEFYVQ-GQTQHLKGNYQAAIAAYSKSISLNPQYAPAFKGRGLVYFDTGNKEGAIADYN 117
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L+ ++ AY A SIG+Y++A + +AI + + E + + + +
Sbjct: 118 QALGLNSQDAEAYNNRANAFVSIGDYRRAIADYNQAISIAPKYAEVYNNRGNARANQGDK 177
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
ALE Q + I+K ++ AY+ RG G+ +KAI D + + I+P+ R +
Sbjct: 178 NAALEDYTQAIRINKEYAVAYNNRGNAYASRGEPQKAISDYNEAVRINPNFGAAFNNRGN 237
Query: 628 CYHAIGEYREAV 639
Y AIG+ R A+
Sbjct: 238 AYAAIGDKRGAL 249
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A V+ G Y AI+ ++Q + P Y E RG ARA Q + AA+ D+T+AI+ N
Sbjct: 132 NRANAFVSIGDYRRAIADYNQAISIAPKYAEVYNNRGNARANQGDKNAALEDYTQAIRIN 191
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG A A+ GE +AI D ++A+ PN + RG D A++D
Sbjct: 192 KEYAVAYNNRGNAYASRGEPQKAISDYNEAVRINPNFGAAFNNRGNAYAAIGDKRGALKD 251
Query: 506 LS-ACVKLDKE-NKSAY 520
L A DKE NK Y
Sbjct: 252 LQRAAAIFDKEGNKDLY 268
>gi|91772293|ref|YP_564985.1| TPR repeat-containing protein [Methanococcoides burtonii DSM 6242]
gi|91711308|gb|ABE51235.1| Transmembrane and tetraticopeptide repeat-containing protein
[Methanococcoides burtonii DSM 6242]
Length = 414
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 115/250 (46%)
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
++EG +A A++ F+ + P P A G+G + + + EAAI + A+Q +P+
Sbjct: 1 MLDEGDHAGALNAFETAIMYQPNVPAAWYGKGDSHFYLGDYEAAIQAYDMALQYDPNLLN 60
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ + + A +G+S EA KA + A+I +G + ++ +V +
Sbjct: 61 AYAGKADSLAKIGKSDEARTLYEKATAIGADDAEIWSRKGSTLYGLGYYSESVNAYDKAI 120
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
LD N +Y G +L I +Y A EA +A+ D + +W Y L E A
Sbjct: 121 SLDPTNILSYVGKGYSLIGIAQYSDALEAFEEALVFDNGYSISWVGKGDCYYGLGGYEAA 180
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
+ L ID FS A+ +G L+ +G H+ AI + L P ++ L +A
Sbjct: 181 ISAYDMALSIDPTFSPAWSGKGYSLYEIGDHEGAIVAFDTALFHSPKYVKALSGKAFTLF 240
Query: 631 AIGEYREAVI 640
A+ EY ++I
Sbjct: 241 ALEEYDLSLI 250
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+G + G + AI FD L P Y +AL G+ E + ++ F E I ++
Sbjct: 200 GKGYSLYEIGDHEGAIVAFDTALFHSPKYVKALSGKAFTLFALEEYDLSLIAFNETIDAD 259
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S +AW +G + +G++ +A +++ AD L+ G F+ F+ A+E
Sbjct: 260 ASYAKAWSGKGDVLSQIGKAEQATASYRMSVQLYSGDADALYNLGRELFEMGLFSEALEA 319
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A + ++ EN A G AL +G+YK A A +AI + +
Sbjct: 320 FEASLNVNSENLFALVGKGYALYELGDYKGASVAFDQAIAVQPGY 364
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 109/246 (44%), Gaps = 5/246 (2%)
Query: 377 KSISVDF-----RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+IS+D + +G + + +Y+ A+ F++ L D Y + +G+G
Sbjct: 118 KAISLDPTNILSYVGKGYSLIGIAQYSDALEAFEEALVFDNGYSISWVGKGDCYYGLGGY 177
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
EAAIS + A+ +P+ AW +G + +G+ AI AL P L +
Sbjct: 178 EAAISAYDMALSIDPTFSPAWSGKGYSLYEIGDHEGAIVAFDTALFHSPKYVKALSGKAF 237
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F ++++ ++ + + D A++ G LS IG+ ++A ++ ++QL
Sbjct: 238 TLFALEEYDLSLIAFNETIDADASYAKAWSGKGDVLSQIGKAEQATASYRMSVQLYSGDA 297
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+A +L + ++ +ALE + L ++ A +G L+ LG +K A
Sbjct: 298 DALYNLGRELFEMGLFSEALEAFEASLNVNSENLFALVGKGYALYELGDYKGASVAFDQA 357
Query: 612 LGIDPS 617
+ + P
Sbjct: 358 IAVQPG 363
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 100/246 (40%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y+ +++ +D+ + DP + +G+G + + A+ F EA+ + +W
Sbjct: 107 GYYSESVNAYDKAISLDPTNILSYVGKGYSLIGIAQYSDALEAFEEALVFDNGYSISWVG 166
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G LG AI AL +P + +G ++ D A+ +
Sbjct: 167 KGDCYYGLGGYEAAISAYDMALSIDPTFSPAWSGKGYSLYEIGDHEGAIVAFDTALFHSP 226
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A + L ++ EY + A + I D ++ +AW + +E+A
Sbjct: 227 KYVKALSGKAFTLFALEEYDLSLIAFNETIDADASYAKAWSGKGDVLSQIGKAEQATASY 286
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + + + A + G L +G +A++ + L ++ N+ L + + +G+
Sbjct: 287 RMSVQLYSGDADALYNLGRELFEMGLFSEALEAFEASLNVNSENLFALVGKGYALYELGD 346
Query: 635 YREAVI 640
Y+ A +
Sbjct: 347 YKGASV 352
>gi|443476573|ref|ZP_21066472.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
gi|443018443|gb|ELS32690.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
Length = 822
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 153/330 (46%), Gaps = 40/330 (12%)
Query: 329 SKSSISDNKSSDSTESRSKLSFKWDMLKET---------SNEAKRNKKFCVTRISKSKSI 379
++SS+ + + + R++ ++W++ ++ +R KK V +I KS ++
Sbjct: 376 AQSSLGNEQKALEDFDRARFDYEWNLRSRGGSRRDREYYADVLQRPKKAPVEQI-KSPTL 434
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S G A G Y AI+ + + ++ P + +A RG A+ + + AISD++
Sbjct: 435 S----YQSGNANSRVGNYRQAIADYSEAIRLKPDFADAFNNRGNAKYNLEDKQGAISDYS 490
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI+ P + A+ RG A++ LG+ AI D ++A+ +PN AD + RG D
Sbjct: 491 EAIRLKPDSINAFNNRGNAKSDLGDKEGAIADYNEAIRIKPNYADAYNGRGNAKSALGDQ 550
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ D + +++ ++ AY G A S++G+ + A +AI+L+ NFL Q
Sbjct: 551 QGPIADFNEAIRISPDHYKAYNNRGNARSALGDKQGAIADFNEAIRLNSNFL-------Q 603
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG--QHKKAIKDLSSGLGIDPS 617
Y++ +NS+K L Q I R + G+ K AI D + +DPS
Sbjct: 604 VYKNRSNSKKYLGDEQGA--IADRIE-------FIQQGVSSKNEKVAISDYDELMRLDPS 654
Query: 618 NIECLY-------LRASCYH-AIGEYREAV 639
N Y L+ Y AI +Y E +
Sbjct: 655 NKSKYYSGRARIKLKLEDYQGAISDYNEVI 684
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI-GRGTARAFQRELEAAISDFTEAIQ 443
+ +G++ NE AIS +D++++ DP GR + + + AISD+ E I+
Sbjct: 629 IQQGVSSKNE---KVAISDYDELMRLDPSNKSKYYSGRARIKLKLEDYQGAISDYNEVIR 685
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN--SADILHERGIVNFKFKDFNA 501
+ P+ +++ R A+ + AI D ++A+ + D + RG + KD+
Sbjct: 686 AEPNNADSYSSRAFAKLRISNYQGAIDDCTQAIRISQGYENYDYYYIRGDAKLELKDYQG 745
Query: 502 AVEDLSACV 510
A++D + V
Sbjct: 746 AIDDYNQVV 754
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA--------- 426
SK +S R I + G Y AI+ + ++++ +P +A R TA+
Sbjct: 57 SKRLSAQQLHDRAIKKRQGGDYEGAIADYTELIRLEPTNAKAYNDRATAKKEIASERKFG 116
Query: 427 -FQ---RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
FQ +L+ A++D EAI+ + R + + + + ++ D +A+ EP++
Sbjct: 117 DFQAKITDLKGALADNNEAIRLELQNASFYSSRAETKQKMNDFNGSLADYKEAMRLEPSN 176
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKL 512
D R + D+ AA+ D ++L
Sbjct: 177 DDFYRNRAALFVAISDYQAALADYDEAIRL 206
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 80/207 (38%), Gaps = 57/207 (27%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A+ G I+ F++ ++ P + +A RG AR+ + + AI+DF EAI+ N
Sbjct: 540 RGNAKSALGDQQGPIADFNEAIRISPDHYKAYNNRGNARSALGDKQGAIADFNEAIRLNS 599
Query: 447 SAGEAWKRR-------GQARAALGESVEAIQ----------------------------- 470
+ + +K R G + A+ + +E IQ
Sbjct: 600 NFLQVYKNRSNSKKYLGDEQGAIADRIEFIQQGVSSKNEKVAISDYDELMRLDPSNKSKY 659
Query: 471 -------------------DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
D ++ + EPN+AD R + ++ A++D + ++
Sbjct: 660 YSGRARIKLKLEDYQGAISDYNEVIRAEPNNADSYSSRAFAKLRISNYQGAIDDCTQAIR 719
Query: 512 LDK--ENKSAYTYLGLALSSIGEYKKA 536
+ + EN Y G A + +Y+ A
Sbjct: 720 ISQGYENYDYYYIRGDAKLELKDYQGA 746
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/313 (18%), Positives = 121/313 (38%), Gaps = 70/313 (22%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI-------------- 442
Y A++I ++ ++ + R A+ R+ A++D EAI
Sbjct: 276 YDGALAILNEAIRLNSKDSSLYASRAFAKIETRDYRGALADANEAISLDHKFVRAYISLG 335
Query: 443 ------QSNPSAGEAWKR-------------------RGQARAALGESVEAIQDLSKA-L 476
+ N A + R +G A+++LG +A++D +A
Sbjct: 336 RAKSYLRDNQGALADYDRAYPLFDKWALNNLARISYYQGLAQSSLGNEQKALEDFDRARF 395
Query: 477 EFEPN-------------SADIL-----------------HERGIVNFKFKDFNAAVEDL 506
++E N AD+L ++ G N + ++ A+ D
Sbjct: 396 DYEWNLRSRGGSRRDREYYADVLQRPKKAPVEQIKSPTLSYQSGNANSRVGNYRQAIADY 455
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S ++L + A+ G A ++ + + A + +AI+L + + A+ + DL +
Sbjct: 456 SEAIRLKPDFADAFNNRGNAKYNLEDKQGAISDYSEAIRLKPDSINAFNNRGNAKSDLGD 515
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A+ + + I ++ AY+ RG LG + I D + + I P + + R
Sbjct: 516 KEGAIADYNEAIRIKPNYADAYNGRGNAKSALGDQQGPIADFNEAIRISPDHYKAYNNRG 575
Query: 627 SCYHAIGEYREAV 639
+ A+G+ + A+
Sbjct: 576 NARSALGDKQGAI 588
>gi|443319283|ref|ZP_21048517.1| Flp pilus assembly protein TadD [Leptolyngbya sp. PCC 6406]
gi|442781110|gb|ELR91216.1| Flp pilus assembly protein TadD [Leptolyngbya sp. PCC 6406]
Length = 492
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ N G+Y +AI+ FD + + P Y A + RG A + + AI ++AI+ +
Sbjct: 72 NRGVDYFNRGEYVNAIADFDAAIVQQPDYAAAFMYRGAALSQLGRADEAIGSLSQAIRLD 131
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG +A+ D+ +AL +P +G+V+ + + +A+ +
Sbjct: 132 PTLARAYLLRGTAYYELGNITQALVDVQEALIHDPELVSAYLYQGLVDTQIGNIESAIAN 191
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEE--------------AHL---------- 541
LS ++++ +N +AY G A G+Y+ A AH+
Sbjct: 192 LSEAIRINPQNLNAYILRGFAYDRAGDYRSAIADFTYVIENTRASGIAHVGRGVAHYHLG 251
Query: 542 ----------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
A++ +E + + + Y ++A+ L + + D F Y R
Sbjct: 252 NLTDAERDLNTAVRYTPGAVEPYYNRSFVYAAQGRPQRAIRDLDEAINRDTSFFAGYLNR 311
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
G+L +G H AI DLS L ++ + R A G REA++
Sbjct: 312 GILHSSMGNHGSAIADLSRALELNGDSALAYRYRGDAQLARGNEREALL 360
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 6/234 (2%)
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+E P P L RG + E AI+DF AI P A+ RG A + LG + EA
Sbjct: 61 EEVPPSPVELYNRGVDYFNRGEYVNAIADFDAAIVQQPDYAAAFMYRGAALSQLGRADEA 120
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS+A+ +P A RG ++ + A+ D+ + D E SAY Y GL +
Sbjct: 121 IGSLSQAIRLDPTLARAYLLRGTAYYELGNITQALVDVQEALIHDPELVSAYLYQGLVDT 180
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI--DKRFSK 586
IG + A +AI+++ L A+ L F D A ++ + Y+ + R S
Sbjct: 181 QIGNIESAIANLSEAIRINPQNLNAY-ILRGFAYDRAGDYRS--AIADFTYVIENTRASG 237
Query: 587 AYHL-RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
H+ RG+ + LG A +DL++ + P +E Y R+ Y A G + A+
Sbjct: 238 IAHVGRGVAHYHLGNLTDAERDLNTAVRYTPGAVEPYYNRSFVYAAQGRPQRAI 291
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G Y SAI+ F +++ A +GRG A L A D A++ P
Sbjct: 209 RGFAYDRAGDYRSAIADFTYVIENTRASGIAHVGRGVAHYHLGNLTDAERDLNTAVRYTP 268
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A E + R AA G AI+DL +A+ + + RGI++ + +A+ DL
Sbjct: 269 GAVEPYYNRSFVYAAQGRPQRAIRDLDEAINRDTSFFAGYLNRGILHSSMGNHGSAIADL 328
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S ++L+ ++ AY Y G A + G ++A + +A+ LD N E + + +
Sbjct: 329 SRALELNGDSALAYRYRGDAQLARGNEREALLDYSQALALDPNNPELYTLRGKVRFARGD 388
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
AL Q +++ ++ AY RG++ +G ++A DLS + ++
Sbjct: 389 IPGALADYNQAIFLRPDYTAAYSARGMVYAQVGDSQRAYDDLSLVIAVE 437
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 7/267 (2%)
Query: 374 SKSKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
S S++I +D L+R G A G A+ + L DP A + +G
Sbjct: 123 SLSQAIRLDPTLARAYLLRGTAYYELGNITQALVDVQEALIHDPELVSAYLYQGLVDTQI 182
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH- 487
+E+AI++ +EAI+ NP A+ RG A G+ AI D + +E ++ I H
Sbjct: 183 GNIESAIANLSEAIRINPQNLNAYILRGFAYDRAGDYRSAIADFTYVIE-NTRASGIAHV 241
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ ++ + A DL+ V+ Y ++ G ++A +AI D
Sbjct: 242 GRGVAHYHLGNLTDAERDLNTAVRYTPGAVEPYYNRSFVYAAQGRPQRAIRDLDEAINRD 301
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+F + + + + N A+ L + L ++ + AY RG G ++A+ D
Sbjct: 302 TSFFAGYLNRGILHSSMGNHGSAIADLSRALELNGDSALAYRYRGDAQLARGNEREALLD 361
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGE 634
S L +DP+N E LR A G+
Sbjct: 362 YSQALALDPNNPELYTLRGKVRFARGD 388
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G+ G SAI+ + ++ +P A I RG A + +AI+DFT I++
Sbjct: 173 LYQGLVDTQIGNIESAIANLSEAIRINPQNLNAYILRGFAYDRAGDYRSAIADFTYVIEN 232
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
++G A RG A LG +A +DL+ A+ + P + + + R V A+
Sbjct: 233 TRASGIAHVGRGVAHYHLGNLTDAERDLNTAVRYTPGAVEPYYNRSFVYAAQGRPQRAIR 292
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DL + D + Y G+ SS+G + A +A++L+ + A+ +
Sbjct: 293 DLDEAINRDTSFFAGYLNRGILHSSMGNHGSAIADLSRALELNGDSALAYRYRGDAQLAR 352
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
N +AL Q L +D + Y LRG + G A+ D + + + P
Sbjct: 353 GNEREALLDYSQALALDPNNPELYTLRGKVRFARGDIPGALADYNQAIFLRPDYTAAYSA 412
Query: 625 RASCYHAIGEYREA 638
R Y +G+ + A
Sbjct: 413 RGMVYAQVGDSQRA 426
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V+ +R +G+ AI D+ + D + + RG + +AI+D +
Sbjct: 270 AVEPYYNRSFVYAAQGRPQRAIRDLDEAINRDTSFFAGYLNRGILHSSMGNHGSAIADLS 329
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A++ N + A++ RG A+ A G EA+ D S+AL +PN+ ++ RG V F D
Sbjct: 330 RALELNGDSALAYRYRGDAQLARGNEREALLDYSQALALDPNNPELYTLRGKVRFARGDI 389
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + + L + +AY+ G+ + +G+ ++A
Sbjct: 390 PGALADYNQAIFLRPDYTAAYSARGMVYAQVGDSQRA 426
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 2/226 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG+A + G A + ++ P E R A Q + AI D EAI
Sbjct: 241 VGRGVAHYHLGNLTDAERDLNTAVRYTPGAVEPYYNRSFVYAAQGRPQRAIRDLDEAINR 300
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ S + RG +++G AI DLS+ALE +SA RG + A+
Sbjct: 301 DTSFFAGYLNRGILHSSMGNHGSAIADLSRALELNGDSALAYRYRGDAQLARGNEREALL 360
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S + LD N YT G + G+ A + +AI L ++ A+ Y +
Sbjct: 361 DYSQALALDPNNPELYTLRGKVRFARGDIPGALADYNQAIFLRPDYTAAYSARGMVYAQV 420
Query: 565 ANSEKALECLQQVLYIDKRF--SKAYHLRGLLLHGLGQHKKAIKDL 608
+S++A + L V+ +++ ++ RG+ LG A +DL
Sbjct: 421 GDSQRAYDDLSLVIAVEEGAVSPDVFYQRGMSRLRLGDRFGARQDL 466
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + +S++ ++ D L+ RG AQ+ G A+ + Q L DP PE R
Sbjct: 320 NHGSAIADLSRALELNGDSALAYRYRGDAQLARGNEREALLDYSQALALDPNNPELYTLR 379
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R + ++ A++D+ +AI P A+ RG A +G+S A DLS + E
Sbjct: 380 GKVRFARGDIPGALADYNQAIFLRPDYTAAYSARGMVYAQVGDSQRAYDDLSLVIAVEEG 439
Query: 482 --SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
S D+ ++RG+ + D A +DL E A Y
Sbjct: 440 AVSPDVFYQRGMSRLRLGDRFGARQDLEQAANRYLETGQAEPY 482
>gi|423064909|ref|ZP_17053699.1| putative TPR repeat protein [Arthrospira platensis C1]
gi|406714152|gb|EKD09320.1| putative TPR repeat protein [Arthrospira platensis C1]
Length = 631
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 126/261 (48%), Gaps = 1/261 (0%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I+ DF L +G A +NE +Y AI+ D+ L+ +P EA +G A ++ A+ +
Sbjct: 267 IADDF-LKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALECY 325
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
A++ P +AW RG L A++ ++AL+ EPN + H RG + KF+
Sbjct: 326 DRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKFQK 385
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A++ ++L+ + + G LS + Y++A ++ +AIQ++ + W +
Sbjct: 386 YEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRG 445
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ +AL C +Q + ++ + + + +G +L L +H++A+ + + +
Sbjct: 446 MDLCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSDS 505
Query: 619 IECLYLRASCYHAIGEYREAV 639
E R A+ +Y +A+
Sbjct: 506 YEAWMGRGEILTALKQYEQAL 526
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 116/272 (42%), Gaps = 2/272 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAF 427
C R K + D +RG V +Y+ A+ ++Q LK +P RG R F
Sbjct: 324 CYDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKF 383
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q+ E A+ + AI+ + E W RG + L EAI +A++ P DI
Sbjct: 384 QK-YEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 442
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ ++ A+ + L+ + + G L + +++A + +AI L
Sbjct: 443 NRGMDLCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLK 502
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ EAW + L E+AL +V+ + +A+ RG+ L + QH AI
Sbjct: 503 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIAC 562
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + + P + E R + + +Y+EA+
Sbjct: 563 FDTAIALKPDHAESWRHRGALLSRLKKYQEAI 594
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 110/229 (48%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P+ + + +G A +R+ + AI+ A++ NP EAW ++G A L + +A++
Sbjct: 265 PLIADDFLKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALEC 324
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+AL+ +P +D + RG V + K ++ A+E + +K++ + + + G L
Sbjct: 325 YDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKFQ 384
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+Y++A +++ +AI+L+ N E W + L ++A+ + + I+ + R
Sbjct: 385 KYEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 444
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
G+ L + Q+ +A+ + ++ E + + + EAVI
Sbjct: 445 GMDLCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVI 493
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 95/219 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ +D+ ++ + + E RG + + + AIS + AIQ NP + W R
Sbjct: 385 KYEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 444
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + + EA+ +A+ ++ +G V K AV + L +
Sbjct: 445 GMDLCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSD 504
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G L+++ +Y++A + I L + +AW + + + A+ C
Sbjct: 505 SYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIACFD 564
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + ++++ RG LL L ++++AI L + I
Sbjct: 565 TAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISI 603
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+ + +Y+ A+S ++Q + + PE I +G E A+ + A
Sbjct: 439 DIWANRGMDLCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRA 498
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I + EAW RG+ AL + +A+ + + + +P++ +RGI K + +
Sbjct: 499 ISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDD 558
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A+ + L ++ ++ + G LS + +Y++A + KAI + ++
Sbjct: 559 AIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKDL 607
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQI--LKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ +S+G V ++ A+ +D+ LK D EA +GRG ++ E A++++
Sbjct: 473 ELWISQGGVLVKLARHEEAVICYDRAISLKSDSY--EAWMGRGEILTALKQYEQALANWD 530
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I P A +AW +RG + + +AI A+ +P+ A+ RG + + K +
Sbjct: 531 RVIALQPDAYQAWCQRGICLEKMEQHDDAIACFDTAIALKPDHAESWRHRGALLSRLKKY 590
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
A+ L + + K+ ++ L A SIG+
Sbjct: 591 QEAIASLGKAISIQKDLRNG-KKLANASQSIGD 622
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 77/187 (41%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AIS +D+ ++ +P + RG + A+S + +AI N E W +
Sbjct: 419 RYQEAISSYDRAIQINPGQFDIWANRGMDLCHIHQYSEALSCYEQAISLNSKEPELWISQ 478
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +A+ + +S + RG + K + A+ + + L +
Sbjct: 479 GGVLVKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPD 538
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L + ++ A AI L + E+W H L ++A+ L
Sbjct: 539 AYQAWCQRGICLEKMEQHDDAIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLG 598
Query: 576 QVLYIDK 582
+ + I K
Sbjct: 599 KAISIQK 605
>gi|307106595|gb|EFN54840.1| hypothetical protein CHLNCDRAFT_134871 [Chlorella variabilis]
Length = 802
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 128/294 (43%), Gaps = 34/294 (11%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ DF +RG + +Y A++ + + ++ +P + +A R A R + A +D++
Sbjct: 498 NADFYHNRGFSYRKMERYEDAVADYTRAVQFNPAHTKAYYNRAVALERLRRYQDAAADYS 557
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
++ +P A + RG LG EA DL AL + +A H RG V +
Sbjct: 558 LVLRLDPRNAPALQNRGTVWLRLGRLGEARADLDAALRLDSGAAASWHARGEVLERLGQV 617
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---------RNF 550
AA+ DL +LD + + LGLAL + G +++A + +QL R F
Sbjct: 618 QAALADLQRACELDPAHPAYLRSLGLALRNCGRHEQAVGVLGRVLQLQADDEAALQARGF 677
Query: 551 -----------------LEAWGHLT--QF------YQDLANSEKALECLQQVLYIDKRFS 585
L A GH T F + L N +A+ + + +D
Sbjct: 678 CLRKAGSFAAAAEDYGRLIALGHATVRNFNSRAYCHASLGNYAQAVADYSEAIQLDPENV 737
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A+ RG+ G H A+ D ++ + +DP+N Y RASC+ A+G+Y AV
Sbjct: 738 HAFFNRGISHEKRGSHAAAVDDFTACIRLDPTNAVAFYNRASCFDALGQYERAV 791
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 2/240 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A EG + A+ + L DP + + L R + +AA+ D+ A+
Sbjct: 402 ARGYALRKEGDFEGAVREYSAALALDPAHFKCLFNRAFSLDKLGRYDAALRDYEAALGLE 461
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A G R LG+ A+ S A+ EP +AD H RG K + + AV D
Sbjct: 462 PGSSYAHYNAGIVRDRLGQYAAAVAAFSAAIALEPRNADFYHNRGFSYRKMERYEDAVAD 521
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ V+ + + AY +AL + Y+ A + ++LD A + + L
Sbjct: 522 YTRAVQFNPAHTKAYYNRAVALERLRRYQDAAADYSLVLRLDPRNAPALQNRGTVWLRLG 581
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+A L L +D + ++H RG +L LGQ + A+ DL +DP++ YLR
Sbjct: 582 RLGEARADLDAALRLDSGAAASWHARGEVLERLGQVQAALADLQRACELDPAHPA--YLR 639
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G+A N G++ A+ + ++L+ AL RG AA D+ I
Sbjct: 640 SLGLALRNCGRHEQAVGVLGRVLQLQADDEAALQARGFCLRKAGSFAAAAEDYGRLIALG 699
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + R A+LG +A+ D S+A++ +P + RGI + K AAV+D
Sbjct: 700 HATVRNFNSRAYCHASLGNYAQAVADYSEAIQLDPENVHAFFNRGISHEKRGSHAAAVDD 759
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+AC++LD N A+ ++G+Y++A + +A+
Sbjct: 760 FTACIRLDPTNAVAFYNRASCFDALGQYERAVGDYRRAL 798
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 101/261 (38%), Gaps = 34/261 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A +Y A + + +L+ DP AL RGT L A +D A++ +
Sbjct: 538 NRAVALERLRRYQDAAADYSLVLRLDPRNAPALQNRGTVWLRLGRLGEARADLDAALRLD 597
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL------------HE----- 488
A +W RG+ LG+ A+ DL +A E +P L HE
Sbjct: 598 SGAAASWHARGEVLERLGQVQAALADLQRACELDPAHPAYLRSLGLALRNCGRHEQAVGV 657
Query: 489 -----------------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
RG K F AA ED + L + +S+G
Sbjct: 658 LGRVLQLQADDEAALQARGFCLRKAGSFAAAAEDYGRLIALGHATVRNFNSRAYCHASLG 717
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
Y +A + +AIQLD + A+ + ++ + A++ + +D + A++ R
Sbjct: 718 NYAQAVADYSEAIQLDPENVHAFFNRGISHEKRGSHAAAVDDFTACIRLDPTNAVAFYNR 777
Query: 592 GLLLHGLGQHKKAIKDLSSGL 612
LGQ+++A+ D L
Sbjct: 778 ASCFDALGQYERAVGDYRRAL 798
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%)
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E AL VL + A + RG + LG ++AI+D S L +DP++ + Y RA+
Sbjct: 85 ETALHDYGAVLRHEPGHVDAAYQRGAVCQQLGSTEQAIRDFSLVLRLDPNHAKAAYSRAA 144
Query: 628 CYHAIGEYREA 638
C +G Y EA
Sbjct: 145 CNSLVGRYDEA 155
>gi|17232418|ref|NP_488966.1| hypothetical protein all4926 [Nostoc sp. PCC 7120]
gi|17134064|dbj|BAB76625.1| all4926 [Nostoc sp. PCC 7120]
Length = 1273
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 111/254 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ Q +G AI+ ++Q ++ +P E RG AI+ + +AI+ P
Sbjct: 380 QGLQQAKQGDLLGAIANYEQAIQLNPSSYEYWFNRGLTLFHLERFVEAIASYDQAIEIKP 439
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG LG EA+ L +A+ +P+ +G K A+
Sbjct: 440 DYYKAWYNRGGTLGQLGLYEEAVASLKQAISIQPDMPGAWSSKGWAELKLGQIGEAIASY 499
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L E++ + Y G+AL +Y+ A +++ KA+++ +F E W +L
Sbjct: 500 DEALLLSPEDQENWYYRGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLGQ 559
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+ Q L I F A++ RG+ L LG+ +AI + I P Y +A
Sbjct: 560 WSEAIASWDQALSIQADFYLAWYNRGVALENLGRRAEAIASYKQAIEIKPDFHLAWYNQA 619
Query: 627 SCYHAIGEYREAVI 640
+ + EA++
Sbjct: 620 VALFYLERFLEAIV 633
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA + +Y +AI +D+ L+ P + E I RG + AI+ + +A+
Sbjct: 516 RGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLGQWSEAIASWDQALSIQA 575
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG A LG EAI +A+E +P+ + + + F + F A+
Sbjct: 576 DFYLAWYNRGVALENLGRRAEAIASYKQAIEIKPDFHLAWYNQAVALFYLERFLEAIVCY 635
Query: 507 SACVKLDKENKSAYTYLGLALSSIGE 532
+++ + A+ G A+ ++ E
Sbjct: 636 DNALQIKLDYWEAWIGRGTAIGNLNE 661
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 6/157 (3%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL---GLALSSIGEYKKAEEAHLK 542
L +G+ K D A+ + ++L N S+Y Y GL L + + +A ++ +
Sbjct: 377 LFYQGLQQAKQGDLLGAIANYEQAIQL---NPSSYEYWFNRGLTLFHLERFVEAIASYDQ 433
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI++ ++ +AW + L E+A+ L+Q + I A+ +G LGQ
Sbjct: 434 AIEIKPDYYKAWYNRGGTLGQLGLYEEAVASLKQAISIQPDMPGAWSSKGWAELKLGQIG 493
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI L + P + E Y R +Y A+
Sbjct: 494 EAIASYDEALLLSPEDQENWYYRGIALGVDEQYEAAI 530
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ SI DF L+ RG+A N G+ A AI+ + Q ++ P + A + A
Sbjct: 563 AIASWDQALSIQADFYLAWYNRGVALENLGRRAEAIASYKQAIEIKPDFHLAWYNQAVAL 622
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
+ AI + A+Q EAW RG A L E+
Sbjct: 623 FYLERFLEAIVCYDNALQIKLDYWEAWIGRGTAIGNLNET 662
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Query: 375 KSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+ I DF + RG+ N G+++ AI+ +DQ L + A RG A
Sbjct: 535 KALEIQPDFHEVWIDRGVVLFNLGQWSEAIASWDQALSIQADFYLAWYNRGVALENLGRR 594
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
AI+ + +AI+ P AW + A L +EAI AL+ + + + RG
Sbjct: 595 AEAIASYKQAIEIKPDFHLAWYNQAVALFYLERFLEAIVCYDNALQIKLDYWEAWIGRG 653
>gi|425466275|ref|ZP_18845578.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9809]
gi|389831304|emb|CCI26077.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9809]
Length = 423
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 126/255 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + KY A++ +D+ ++ +P + RG Q++ E A+SD +AI N
Sbjct: 139 NRGNLYYDLQKYDLALADYDKAIEINPNFAILYYNRGGVYYNQQKYELALSDINKAIDIN 198
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG L + A+ D++KA+E PN A+ + RG++ + ++ A+ D
Sbjct: 199 PNYAEAYYNRGNIYYDLQKYELALSDINKAIELNPNYAEAYNNRGLLYKDLQKYDLALSD 258
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + ++ AY G+ +Y A + KAI+++RN + + Y+
Sbjct: 259 YSKAIDINPNLAEAYVNRGVLYRLQEKYDLALSDYSKAIEINRNLAGTYYNRGVLYRLQE 318
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ AL + + I+ +++AY RG+L G +++ A+ D + + I+P+ + R
Sbjct: 319 KYDLALADWNKAIEINPNYAEAYVNRGVLYFGQKKYELALSDYNKAIEINPNLAQAYLGR 378
Query: 626 ASCYHAIGEYREAVI 640
Y +G+ +A I
Sbjct: 379 GGLYAILGQPEKAKI 393
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 117/240 (48%), Gaps = 3/240 (1%)
Query: 375 KSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+ I+ +F + +RG N+ KY A+S ++ + +P Y EA RG ++
Sbjct: 159 KAIEINPNFAILYYNRGGVYYNQQKYELALSDINKAIDINPNYAEAYYNRGNIYYDLQKY 218
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+SD +AI+ NP+ EA+ RG L + A+ D SKA++ PN A+ RG+
Sbjct: 219 ELALSDINKAIELNPNYAEAYNNRGLLYKDLQKYDLALSDYSKAIDINPNLAEAYVNRGV 278
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + ++ A+ D S +++++ Y G+ +Y A KAI+++ N+
Sbjct: 279 LYRLQEKYDLALSDYSKAIEINRNLAGTYYNRGVLYRLQEKYDLALADWNKAIEINPNYA 338
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + Y E AL + + I+ ++AY RG L LGQ +KA DL
Sbjct: 339 EAYVNRGVLYFGQKKYELALSDYNKAIEINPNLAQAYLGRGGLYAILGQPEKAKIDLQQA 398
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 102/211 (48%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+ RG Q++ E A+ D+ +AI+ NP+ A+ RG L + A+ D KA+E
Sbjct: 104 VNRGILYRRQQKYELALDDYNKAIKLNPNHANAYNNRGNLYYDLQKYDLALADYDKAIEI 163
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
PN A + + RG V + + + A+ D++ + ++ AY G + +Y+ A
Sbjct: 164 NPNFAILYYNRGGVYYNQQKYELALSDINKAIDINPNYAEAYYNRGNIYYDLQKYELALS 223
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
KAI+L+ N+ EA+ + Y+DL + AL + + I+ ++AY RG+L
Sbjct: 224 DINKAIELNPNYAEAYNNRGLLYKDLQKYDLALSDYSKAIDINPNLAEAYVNRGVLYRLQ 283
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
++ A+ D S + I+ + Y R Y
Sbjct: 284 EKYDLALSDYSKAIEINRNLAGTYYNRGVLY 314
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 7/239 (2%)
Query: 367 KFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
+ ++ I+K+ I+ ++ +RG + KY A+S ++ ++ +P Y EA RG
Sbjct: 185 ELALSDINKAIDINPNYAEAYYNRGNIYYDLQKYELALSDINKAIELNPNYAEAYNNRGL 244
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNS 482
++ + A+SD+++AI NP+ EA+ RG L E + A+ D SKA+E N
Sbjct: 245 LYKDLQKYDLALSDYSKAIDINPNLAEAYVNRG-VLYRLQEKYDLALSDYSKAIEINRNL 303
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A + RG++ + ++ A+ D + ++++ AY G+ +Y+ A + K
Sbjct: 304 AGTYYNRGVLYRLQEKYDLALADWNKAIEINPNYAEAYVNRGVLYFGQKKYELALSDYNK 363
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ--VLYIDKRFSKAYHLRGLLLHGLG 599
AI+++ N +A+ Y L EKA LQQ +L++ + AY +L LG
Sbjct: 364 AIEINPNLAQAYLGRGGLYAILGQPEKAKIDLQQAAILFLQQNNMAAYEKVMQILQQLG 422
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 93/191 (48%), Gaps = 1/191 (0%)
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
G+ K G R A +A+ +++A+ PN+ + +E+ V + K ++ + ++
Sbjct: 33 GDFSKIAGTEREARENYEQALTVINQAISLVPNNPNYYNEKWAVLSELKRYDEGLAAITQ 92
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+ L + Y G+ +Y+ A + + KAI+L+ N A+ + Y DL +
Sbjct: 93 AIDLAPR-AAWYVNRGILYRRQQKYELALDDYNKAIKLNPNHANAYNNRGNLYYDLQKYD 151
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
AL + + I+ F+ Y+ RG + + +++ A+ D++ + I+P+ E Y R +
Sbjct: 152 LALADYDKAIEINPNFAILYYNRGGVYYNQQKYELALSDINKAIDINPNYAEAYYNRGNI 211
Query: 629 YHAIGEYREAV 639
Y+ + +Y A+
Sbjct: 212 YYDLQKYELAL 222
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
+K+ + SK+I ++ L+ RG+ + KY A+S + + ++ +
Sbjct: 250 QKYDLALSDYSKAIDINPNLAEAYVNRGVLYRLQEKYDLALSDYSKAIEINRNLAGTYYN 309
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG Q + + A++D+ +AI+ NP+ EA+ RG + A+ D +KA+E P
Sbjct: 310 RGVLYRLQEKYDLALADWNKAIEINPNYAEAYVNRGVLYFGQKKYELALSDYNKAIEINP 369
Query: 481 NSADILHERGIVNFKFKDFNAAVEDL--SACVKLDKENKSAYTYLGLALSSIG 531
N A RG + A DL +A + L + N +AY + L +G
Sbjct: 370 NLAQAYLGRGGLYAILGQPEKAKIDLQQAAILFLQQNNMAAYEKVMQILQQLG 422
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Query: 11 YRLNKTHK-TICEIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLLA 64
YRL + + + + + + ++ +A R L +L +L +W+KAI I + A
Sbjct: 280 YRLQEKYDLALSDYSKAIEINRNLAGTYYNRGVLYRLQEKYDLALADWNKAIEI-NPNYA 338
Query: 65 QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
++Y NR Y + ++ + D +KA++++P L QAY+ +G ++ LG+ E+A
Sbjct: 339 EAY-----VNRGVLYFGQKKYELALSDYNKAIEINPNLAQAYLGRGGLYAILGQPEKA 391
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLLAQSY 67
L K + + + + ++ +A A R L +L +L ++SKAI I +L Y
Sbjct: 249 LQKYDLALSDYSKAIDINPNLAEAYVNRGVLYRLQEKYDLALSDYSKAIEINRNLAGTYY 308
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
NR Y E + + D +KA++++P +AY+ +G + + E ALS +
Sbjct: 309 ------NRGVLYRLQEKYDLALADWNKAIEINPNYAEAYVNRGVLYFGQKKYELALSDYN 362
Query: 128 KGYE 131
K E
Sbjct: 363 KAIE 366
>gi|365883408|ref|ZP_09422556.1| conserved exported hypothetical protein [Bradyrhizobium sp. ORS
375]
gi|365288132|emb|CCD95087.1| conserved exported hypothetical protein [Bradyrhizobium sp. ORS
375]
Length = 460
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 5/238 (2%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+RL + + G A + + DP EA RG QR L+ A++D+ +AI
Sbjct: 107 YRLRGDLMREAGGDAGKATADLSMAISLDPDDAEAYELRGVVYTGQRRLDRALADYDQAI 166
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P +A+ RG A G++ +A+QD ++A+ +P+ R K + A
Sbjct: 167 RLKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLDPDRPRTFTNRAAAYKKLGQMDKA 226
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQF 560
+ D ++ D + + GL S+G+Y KA + +AI+L NFL G QF
Sbjct: 227 LADDHEAIRRDPKVPEYFDNRGLTYQSLGDYDKAIADYDQAIKLQPKPNFLTNRGDSHQF 286
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+L AL L +D F+ AY+ R +L +G+ KA+ D + L +DP N
Sbjct: 287 KNELG---AALSDYDAALRLDPNFALAYNNRAVLFRKMGERAKALADYEAALRLDPGN 341
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Query: 417 ALIGRGTARAFQRE-LEAAISDFTEAIQSNPSAGEAWKRRGQ-ARAALGESVEAIQDLSK 474
AL+ R A A + A+ D AI + A++ RG R A G++ +A DLS
Sbjct: 71 ALVARADAHARTTGGMTQALRDLDRAIALDGKNARAYRLRGDLMREAGGDAGKATADLSM 130
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+ +P+ A+ RG+V + + A+ D ++L + AY G+A G+ +
Sbjct: 131 AISLDPDDAEAYELRGVVYTGQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNE 190
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
KA + + +AI+LD + + + Y+ L +KAL + + D + + + RGL
Sbjct: 191 KAVQDYNEAIRLDPDRPRTFTNRAAAYKKLGQMDKALADDHEAIRRDPKVPEYFDNRGLT 250
Query: 595 LHGLGQHKKAIKDLSSGLGIDP 616
LG + KAI D + + P
Sbjct: 251 YQSLGDYDKAIADYDQAIKLQP 272
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 2/246 (0%)
Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
+ D+++E +A + IS + + L RG+ + + A++ +DQ ++
Sbjct: 109 LRGDLMREAGGDAGKATADLSMAISLDPDDAEAYEL-RGVVYTGQRRLDRALADYDQAIR 167
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
P Y +A RG A + + E A+ D+ EAI+ +P + R A LG+ +A+
Sbjct: 168 LKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLDPDRPRTFTNRAAAYKKLGQMDKAL 227
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
D +A+ +P + RG+ D++ A+ D +KL + + T G +
Sbjct: 228 ADDHEAIRRDPKVPEYFDNRGLTYQSLGDYDKAIADYDQAIKL-QPKPNFLTNRGDSHQF 286
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
E A + A++LD NF A+ + ++ + KAL + L +D A
Sbjct: 287 KNELGAALSDYDAALRLDPNFALAYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAAS 346
Query: 590 LRGLLL 595
R ++L
Sbjct: 347 GRRVML 352
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G Y AI+ +DQ +K P P L RG + F+ EL AA+SD+ A++ +
Sbjct: 246 NRGLTYQSLGDYDKAIADYDQAIKLQPK-PNFLTNRGDSHQFKNELGAALSDYDAALRLD 304
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
P+ A+ R +GE +A+ D AL +P + + R ++ + K F A
Sbjct: 305 PNFALAYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAASGRRVMLAEIKKFGA 360
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
G +A++DL +A+ + +A RG ++ D A DLS + LD ++ AY
Sbjct: 84 GGMTQALRDLDRAIALDGKNARAYRLRGDLMREAGGDAGKATADLSMAISLDPDDAEAYE 143
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G+ + +A + +AI+L ++ +A+ + ++EKA++ + + +D
Sbjct: 144 LRGVVYTGQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLD 203
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + R LGQ KA+ D + DP E R Y ++G+Y +A+
Sbjct: 204 PDRPRTFTNRAAAYKKLGQMDKALADDHEAIRRDPKVPEYFDNRGLTYQSLGDYDKAI 261
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 33/180 (18%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A G A+ +++ ++ DP P R A +++ A++D EAI+ +P
Sbjct: 179 RGVAFYLRGDNEKAVQDYNEAIRLDPDRPRTFTNRAAAYKKLGQMDKALADDHEAIRRDP 238
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKA------------------------------- 475
E + RG +LG+ +AI D +A
Sbjct: 239 KVPEYFDNRGLTYQSLGDYDKAIADYDQAIKLQPKPNFLTNRGDSHQFKNELGAALSDYD 298
Query: 476 --LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
L +PN A + R ++ K + A+ D A ++LD N +A + + L+ I ++
Sbjct: 299 AALRLDPNFALAYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAASGRRVMLAEIKKF 358
>gi|225851470|ref|YP_002731704.1| TPR Domain containing protein [Persephonella marina EX-H1]
gi|225644946|gb|ACO03132.1| TPR Domain containing protein [Persephonella marina EX-H1]
Length = 345
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 9/210 (4%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A + + E AI +T+AI+ P A+ RG A +G+ EA+++ ++A+ P
Sbjct: 100 GYAYFLKGDPEKAIKCYTKAIEIKPDLAVAYYNRGLAFKKMGDYDEAVKNYNRAIALNPE 159
Query: 482 SADILHERGIVNFKFK-DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
D + GIV ++ K D AV ++++ EN++ Y LG + +YKKA E +
Sbjct: 160 DPDYYYNLGIV-YRIKGDLQKAVNCYKKAIEINPENENYYNNLGNVYYDMKDYKKAVECY 218
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KA++++ F W +L Y D+ + EKA++ ++ L IDKR ++ Y G+ L LG+
Sbjct: 219 KKAVEINPLFFLGWQNLGNTYLDMGDYEKAVKAFKKALKIDKRSAECYMDMGIALKELGR 278
Query: 601 HKKAIKDLSSGLGIDPS-------NIECLY 623
+ +A+K I+P N CLY
Sbjct: 279 YDEALKAYEKAEQINPDLKALSLYNKACLY 308
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P +IL+ + +++F + A E L + LDK N +Y YLG G +KA +
Sbjct: 24 PYPENILY-KAVIHFHTGNNIKAKELLKKYINLDKNNPESYYYLGSIYLEEGNPEKAVKY 82
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
KA++ + E + L Y + EKA++C + + I + AY+ RGL +G
Sbjct: 83 LKKAVEKGKK-AEYFNDLGYAYFLKGDPEKAIKCYTKAIEIKPDLAVAYYNRGLAFKKMG 141
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +A+K+ + + ++P + + Y Y G+ ++AV
Sbjct: 142 DYDEAVKNYNRAIALNPEDPDYYYNLGIVYRIKGDLQKAV 181
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 369 CVTR-ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
C T+ I ++V + +RG+A G Y A+ +++ + +P P+ G
Sbjct: 115 CYTKAIEIKPDLAVAY-YNRGLAFKKMGDYDEAVKNYNRAIALNPEDPDYYYNLGIVYRI 173
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ +L+ A++ + +AI+ NP + G + + +A++ KA+E P
Sbjct: 174 KGDLQKAVNCYKKAIEINPENENYYNNLGNVYYDMKDYKKAVECYKKAVEINPLFFLGWQ 233
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
G D+ AV+ +K+DK + Y +G+AL +G Y +A +A+ KA Q++
Sbjct: 234 NLGNTYLDMGDYEKAVKAFKKALKIDKRSAECYMDMGIALKELGRYDEALKAYEKAEQIN 293
Query: 548 RNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYID 581
+ L+A + Y + EKAL+ L++ ID
Sbjct: 294 PD-LKALSLYNKACLYASKGDKEKALKLLKESFSID 328
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 95/231 (41%), Gaps = 38/231 (16%)
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
++NP E++ G G +A++ L KA+E + A+ ++ G F D A
Sbjct: 57 KNNP---ESYYYLGSIYLEEGNPEKAVKYLKKAVE-KGKKAEYFNDLGYAYFLKGDPEKA 112
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWG---- 555
++ + +++ + AY GLA +G+Y +A + + +AI L D ++ G
Sbjct: 113 IKCYTKAIEIKPDLAVAYYNRGLAFKKMGDYDEAVKNYNRAIALNPEDPDYYYNLGIVYR 172
Query: 556 ---------------------------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+L Y D+ + +KA+EC ++ + I+ F +
Sbjct: 173 IKGDLQKAVNCYKKAIEINPENENYYNNLGNVYYDMKDYKKAVECYKKAVEINPLFFLGW 232
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G +G ++KA+K L ID + EC +G Y EA+
Sbjct: 233 QNLGNTYLDMGDYEKAVKAFKKALKIDKRSAECYMDMGIALKELGRYDEAL 283
>gi|296125217|ref|YP_003632469.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296017033|gb|ADG70270.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 356
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 1/254 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ Y AI F++++ DP Y A G + AI +++A++ +
Sbjct: 43 NRGLSKSGLRMYEEAIRDFEKVISIDPNYVHAYNNIGLVNHNLGNYKEAIKYYSKALELD 102
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + + G A LG EAI++ KA+E PN + G+V + A++D
Sbjct: 103 NNCIQVYNNIGLANHNLGNYEEAIKNYIKAIEISPN-VHTYNNIGLVKNDLGLYEDAIKD 161
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LDK AY +GL+ ++ Y ++ E KA++LD N + ++ DL
Sbjct: 162 FNKVLELDKNYFKAYYNIGLSKYNLKMYDESIEYFNKALELDNNSAYTYNNIGIVKHDLG 221
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++ALE + L +D +SK+Y+ RG+ L + +A+ D + ++P N +
Sbjct: 222 KYKEALEYFDKALELDNNYSKSYYNRGVSKVNLKLYDEAVNDFYKVIELEPQNFNAYFRL 281
Query: 626 ASCYHAIGEYREAV 639
A + Y EA+
Sbjct: 282 AYVKLKLKMYEEAI 295
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y ++I FD+++ E RG +++ R E AI DF + I +P+ A+
Sbjct: 18 GDYKNSIEYFDKLIFYYGDIAELYNNRGLSKSGLRMYEEAIRDFEKVISIDPNYVHAYNN 77
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G LG EAI+ SKALE + N + + G+ N ++ A+++ +++
Sbjct: 78 IGLVNHNLGNYKEAIKYYSKALELDNNCIQVYNNIGLANHNLGNYEEAIKNYIKAIEI-S 136
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N Y +GL + +G Y+ A + K ++LD+N+ +A+ ++ +L ++++E
Sbjct: 137 PNVHTYNNIGLVKNDLGLYEDAIKDFNKVLELDKNYFKAYYNIGLSKYNLKMYDESIEYF 196
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ L +D + Y+ G++ H LG++K+A++ L +D + + Y R +
Sbjct: 197 NKALELDNNSAYTYNNIGIVKHDLGKYKEALEYFDKALELDNNYSKSYYNRGVSKVNLKL 256
Query: 635 YREAV 639
Y EAV
Sbjct: 257 YDEAV 261
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + + G Y AI F+++L+ D Y +A G ++ + + +I F +A++ + +
Sbjct: 146 GLVKNDLGLYEDAIKDFNKVLELDKNYFKAYYNIGLSKYNLKMYDESIEYFNKALELDNN 205
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + G + LG+ EA++ KALE + N + + RG+ K ++ AV D
Sbjct: 206 SAYTYNNIGIVKHDLGKYKEALEYFDKALELDNNYSKSYYNRGVSKVNLKLYDEAVNDFY 265
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
++L+ +N +AY L + Y++A E + K I
Sbjct: 266 KVIELEPQNFNAYFRLAYVKLKLKMYEEAIEYYDKYI 302
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 1/221 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A N G Y AI + + ++ P G + E AI DF + ++ + +
Sbjct: 113 GLANHNLGNYEEAIKNYIKAIEISPN-VHTYNNIGLVKNDLGLYEDAIKDFNKVLELDKN 171
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G ++ L E+I+ +KALE + NSA + GIV + A+E
Sbjct: 172 YFKAYYNIGLSKYNLKMYDESIEYFNKALELDNNSAYTYNNIGIVKHDLGKYKEALEYFD 231
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD +Y G++ ++ Y +A K I+L+ A+ L L
Sbjct: 232 KALELDNNYSKSYYNRGVSKVNLKLYDEAVNDFYKVIELEPQNFNAYFRLAYVKLKLKMY 291
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E+A+E + + + Y RG + L +K A+KD
Sbjct: 292 EEAIEYYDKYIDCNNVSDDVYFNRGFAKYKLSDYKNAVKDF 332
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 52 WSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
+ +I D L+ +I ++ N R S L +++ IRD +K + +DP + AY G
Sbjct: 20 YKNSIEYFDKLIFYYGDIAELYNNRGLSKSGLRMYEEAIRDFEKVISIDPNYVHAYNNIG 79
Query: 111 CAFSALGRKEEALSVWEKGYE 131
LG +EA+ + K E
Sbjct: 80 LVNHNLGNYKEAIKYYSKALE 100
>gi|401425919|ref|XP_003877444.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493689|emb|CBZ28979.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 847
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 1/259 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF +RG Q +G YA+AI+ + + DP + ++ R + E A++ + A
Sbjct: 512 DFFHNRGFTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVAGYAAA 571
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+Q A+ RG A A LG A++D + AL P A L+ RG+V + + ++
Sbjct: 572 LQIVSDNANAYHNRGAALAKLGRLEAAVEDFNSALRLNPKLAFALNARGLVYDQLQQYDK 631
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++LD+ N + G ++GE + A + +I+L + A+ + +
Sbjct: 632 ALADFTEAIRLDQRNPAWLHNRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAF 691
Query: 562 QDLANSEKALECLQQVLYIDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+ L E A+E +VL +K + R L + AI+D + L DP N
Sbjct: 692 RKLGRYEAAIEDYTKVLCEHPGVQTKVLNNRAYCFARLSLFEDAIRDYTEVLATDPVNAH 751
Query: 621 CLYLRASCYHAIGEYREAV 639
LY R + G+Y AV
Sbjct: 752 ALYNRGISFEKCGKYNAAV 770
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI + L DP P G + + A+ FT AI+ + + + RG
Sbjct: 459 YTRAIEDYTAALDLDPRNPFTHYNLGISYDHKGSPARALQAFTRAIELDDRHPDFFHNRG 518
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ G AI D + A+ +P + R K + AV +A +++ +N
Sbjct: 519 FTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVAGYAAALQIVSDN 578
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+AY G AL+ +G + A E A++L+ A Y L +KAL +
Sbjct: 579 ANAYHNRGAALAKLGRLEAAVEDFNSALRLNPKLAFALNARGLVYDQLQQYDKALADFTE 638
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ +D+R H RG +G+ + AI D S+ + + P + RA + +G Y
Sbjct: 639 AIRLDQRNPAWLHNRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAFRKLGRYE 698
Query: 637 EAV 639
A+
Sbjct: 699 AAI 701
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 8/168 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG N G+ AI+ + +K P A R A AF++ EAAI D+T+ +
Sbjct: 652 NRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNR--AFAFRKLGRYEAAIEDYTKVLC 709
Query: 444 SNPSA-GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+P + R A L +AI+D ++ L +P +A L+ RGI K +NAA
Sbjct: 710 EHPGVQTKVLNNRAYCFARLSLFEDAIRDYTEVLATDPVNAHALYNRGISFEKCGKYNAA 769
Query: 503 VEDLSACVKLDKENKS---AYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
V+D + ++L E S +Y G + + + +A E +A++LD
Sbjct: 770 VDDFTRAIRLAPEAPSTANSYYSRGTSRLQLHQVPQATEDLKQALKLD 817
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE-DPM------------YPEALIGRGTARAFQRE 430
RL R A V YASA + D L+E DP EAL RG RA +
Sbjct: 49 RLLRAKAYVQLHDYASACADLDDWLQETDPTAHGINAGAAADRLTEALFYRGVCRARLSQ 108
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
++ A++DFTE +Q P A R A L + AI D AL+ +
Sbjct: 109 VKDAVADFTEVLQRKPGHRRAHYERAACHARLDDFFNAIADYEAALQLD 157
>gi|119356061|ref|YP_910705.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
gi|119353410|gb|ABL64281.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
DSM 266]
Length = 308
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 110/252 (43%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + G + A+ F++ L DP A RG AAI+D+T AI+ NP
Sbjct: 34 GIVKGRSGDTSGALDDFNRALILDPKNSGAYYNRGLVNGQLGNFSAAIADYTSAIKLNPH 93
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ RG A AA G AI D+SKA+ +P ++ + RG V KD+ A+ED +
Sbjct: 94 FPGTYNNRGFAHAATGNYRAAIIDISKAIALDPLIPELYNNRGTVKMSLKDYIGAIEDFT 153
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+L+ + + GLA S G A E A+ D+ + AW + +
Sbjct: 154 KAARLNPKLAGPFNNRGLAKSLAGNIMGAIEDFTLALVRDQTYDAAWYNRGNARLSSGDF 213
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
A+E ++ L + +AY+ R LG ++ A+ D++ + N Y R
Sbjct: 214 NGAIEDYKKALVLQPDLIEAYNNRAFAKASLGDYRGAVDDMNILIEKGTENAMTYYNRGL 273
Query: 628 CYHAIGEYREAV 639
+G+ A+
Sbjct: 274 AKKMLGDLNGAI 285
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 2/230 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ G +++AI+ + +K +P +P RG A A AAI D ++AI +
Sbjct: 66 NRGLVNGQLGNFSAAIADYTSAIKLNPHFPGTYNNRGFAHAATGNYRAAIIDISKAIALD 125
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E + RG + +L + + AI+D +KA P A + RG+ + A+ED
Sbjct: 126 PLIPELYNNRGTVKMSLKDYIGAIEDFTKAARLNPKLAGPFNNRGLAKSLAGNIMGAIED 185
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + D+ +A+ G A S G++ A E + KA+ L + +EA+ + L
Sbjct: 186 FTLALVRDQTYDAAWYNRGNARLSSGDFNGAIEDYKKALVLQPDLIEAYNNRAFAKASLG 245
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL--SSGLG 613
+ A++ + ++ + Y+ RGL LG AI D +S LG
Sbjct: 246 DYRGAVDDMNILIEKGTENAMTYYNRGLAKKMLGDLNGAIADFLKASNLG 295
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
PE I G + + A+ DF A+ +P A+ RG LG AI D +
Sbjct: 27 PEDFIELGIVKGRSGDTSGALDDFNRALILDPKNSGAYYNRGLVNGQLGNFSAAIADYTS 86
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A++ P+ + RG + ++ AA+ D+S + LD Y G S+ +Y
Sbjct: 87 AIKLNPHFPGTYNNRGFAHAATGNYRAAIIDISKAIALDPLIPELYNNRGTVKMSLKDYI 146
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
A E KA +L+ + + N A+E L D+ + A++ RG
Sbjct: 147 GAIEDFTKAARLNPKLAGPFNNRGLAKSLAGNIMGAIEDFTLALVRDQTYDAAWYNRGNA 206
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G AI+D L + P IE RA ++G+YR AV
Sbjct: 207 RLSSGDFNGAIEDYKKALVLQPDLIEAYNNRAFAKASLGDYRGAV 251
>gi|434390009|ref|YP_007125715.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
gi|428262587|gb|AFZ28535.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
7417]
Length = 227
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 87/151 (57%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ +G + AI F ++++ +P Y E RG A++ ++ +AA+SDF +A++ N
Sbjct: 45 NQGVQKLEQGNFNGAIEDFSRVVQLNPRYYEGFCLRGLAKSQLKDFKAAVSDFDQALRLN 104
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ RG A A LG AI D ++ L +P S D + RG +N++ + A+ D
Sbjct: 105 PNHTDAYNGRGTAHAELGSIEAAITDFNQVLRIDPKSVDAYYNRGFLNYRQGNHKLAIAD 164
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ ++++ AY GLA ++G+ K A
Sbjct: 165 FNQALQINPNLADAYGNRGLAEYALGDRKNA 195
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 79/153 (51%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
H +G+ + +FN A+ED S V+L+ + GLA S + ++K A +A++L
Sbjct: 44 HNQGVQKLEQGNFNGAIEDFSRVVQLNPRYYEGFCLRGLAKSQLKDFKAAVSDFDQALRL 103
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ N +A+ + +L + E A+ QVL ID + AY+ RG L + G HK AI
Sbjct: 104 NPNHTDAYNGRGTAHAELGSIEAAITDFNQVLRIDPKSVDAYYNRGFLNYRQGNHKLAIA 163
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + L I+P+ + R +A+G+ + A+
Sbjct: 164 DFNQALQINPNLADAYGNRGLAEYALGDRKNAI 196
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 34/188 (18%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + Q AI DF+ +Q NP E + RG A++ L + A+ D +AL P
Sbjct: 46 QGVQKLEQGNFNGAIEDFSRVVQLNPRYYEGFCLRGLAKSQLKDFKAAVSDFDQALRLNP 105
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N D + RG + + AA+ D + +++D ++ AY G G +K A
Sbjct: 106 NHTDAYNGRGTAHAELGSIEAAITDFNQVLRIDPKSVDAYYNRGFLNYRQGNHKLAIADF 165
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+A+Q++ N +A+G+ RGL + LG
Sbjct: 166 NQALQINPNLADAYGN----------------------------------RGLAEYALGD 191
Query: 601 HKKAIKDL 608
K AI DL
Sbjct: 192 RKNAINDL 199
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 20 ICEIDELVRVDSVMASAI----TARIELAKL-CSLRNWSKAIRILDSLLAQSYEIQDICN 74
+ + D+ +R++ A TA EL + ++ ++++ +RI D +Y N
Sbjct: 94 VSDFDQALRLNPNHTDAYNGRGTAHAELGSIEAAITDFNQVLRI-DPKSVDAY-----YN 147
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
R F + HK I D ++ALQ++P L AY +G A ALG ++ A++ E+
Sbjct: 148 RGFLNYRQGNHKLAIADFNQALQINPNLADAYGNRGLAEYALGDRKNAINDLEQ 201
>gi|67923599|ref|ZP_00517071.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
gi|67854569|gb|EAM49856.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
Length = 1115
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 15/239 (6%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +D+ L+ P Y A + RG A L+ I+ + +A+Q P AW R
Sbjct: 205 QYEQAIASYDKALQLKPDYHPAWVNRGVALYELGRLDEEIASYDKALQLKPDDDVAWNNR 264
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG EAI KAL+ +P+ + + RGI F ++ A+ ++L +
Sbjct: 265 GYALGNLGRWDEAIASYDKALQLKPDKDEAWYNRGIALFNLGRWDEAIASYDKALQLKPD 324
Query: 516 NKSAYTYLGLAL-SSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANS 567
A+ + G+ L ++G +++A + KA+++ ++ AW +L +F +D+A+
Sbjct: 325 YHPAWDHRGIILCDNLGRFEEAITSFEKALEIKPDYYSAWHNRGVALSNLQRFNEDIASY 384
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+KAL+ + +A++ RG L L + +AI L + P E Y R
Sbjct: 385 DKALQ-------LKPDLHQAWYYRGNTLGNLRRLDEAIASYDKALQLKPDFPEAWYHRG 436
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 1/256 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ + + Q G+Y A++ +I ++ P + G ++ E AI+ + +A+Q
Sbjct: 160 IDQAVEQYQRGEYQEAVNTVVEITQQYPNDYQGWYYLGELMGTFQQYEQAIASYDKALQL 219
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG A LG E I KAL+ +P+ + RG ++ A+
Sbjct: 220 KPDYHPAWVNRGVALYELGRLDEEIASYDKALQLKPDDDVAWNNRGYALGNLGRWDEAIA 279
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD- 563
++L + A+ G+AL ++G + +A ++ KA+QL ++ AW H D
Sbjct: 280 SYDKALQLKPDKDEAWYNRGIALFNLGRWDEAIASYDKALQLKPDYHPAWDHRGIILCDN 339
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L E+A+ ++ L I + A+H RG+ L L + + I L + P + Y
Sbjct: 340 LGRFEEAITSFEKALEIKPDYYSAWHNRGVALSNLQRFNEDIASYDKALQLKPDLHQAWY 399
Query: 624 LRASCYHAIGEYREAV 639
R + + EA+
Sbjct: 400 YRGNTLGNLRRLDEAI 415
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR-ELEAAISDFTEAIQS 444
+RGIA N G++ AI+ +D+ L+ P Y A RG E AI+ F +A++
Sbjct: 297 NRGIALFNLGRWDEAIASYDKALQLKPDYHPAWDHRGIILCDNLGRFEEAITSFEKALEI 356
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG A + L E I KAL+ +P+ + RG + + A+
Sbjct: 357 KPDYYSAWHNRGVALSNLQRFNEDIASYDKALQLKPDLHQAWYYRGNTLGNLRRLDEAIA 416
Query: 505 DLSACVKLDKENKSAYTYLGLALSSI----GEYKKAEEAHLKAIQLDR--------NFLE 552
++L + A+ + GLA SS G + E + QL+ N+ +
Sbjct: 417 SYDKALQLKPDFPEAWYHRGLAASSSTASEGYILRVESQFIDTFQLELTDASRQLINYFQ 476
Query: 553 A-----WGHLTQFYQDLANSEKALECLQQ 576
+ +G L F Q NS+K ++ L Q
Sbjct: 477 SLETGDFGDLISFLQQ-PNSDKLIQFLNQ 504
>gi|390441644|ref|ZP_10229686.1| Mom72 protein [Microcystis sp. T1-4]
gi|389835062|emb|CCI33812.1| Mom72 protein [Microcystis sp. T1-4]
Length = 260
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLSAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++ L PN + L R + K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQTLTINPNYVNALGNRCYAYYLTKKYEAAVEDCTKAITLNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G + +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GRHAEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYDESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSS 610
++AYH RGL + LG +KAI DL +
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLEA 231
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L +P Y AL R A ++ EAA+ D T+
Sbjct: 68 ADAYYNRGYAELVLGQYERAIADYTQTLTINPNYVNALGNRCYAYYLTKKYEAAVEDCTK 127
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG EAI+D +KAL + I + R + +
Sbjct: 128 AITLNGNFADFFIYRGNAKDDLGRHAEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D +K++ AY GL +G +KA
Sbjct: 188 QEMALRDYDESLKINANFAEAYHNRGLTHYKLGNREKA 225
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSSQTTANPVKAVEFYNRGVDRLSAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + + + ++ N++ A G+ Y E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQTLTINPNYVNALGNRCYAYYLTKKYEAAVEDCTKAITLNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGE 634
RG LG+H +AI+D + L + + + Y RA Y+ G+
Sbjct: 140 IYRGNAKDDLGRHAEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C I+ + + + DF + RG A+ + G++A AI + + L + I A A+
Sbjct: 125 CTKAITLNGNFA-DFFIYRGNAKDDLGRHAEAIEDYTKALSLQGTRGQDRIFYNRALAYN 183
Query: 429 R--ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
R + E A+ D+ E+++ N + EA+ RG LG +AI DL A
Sbjct: 184 RAGQQEMALRDYDESLKINANFAEAYHNRGLTHYKLGNREKAIADLEAA 232
>gi|148284046|ref|YP_001248136.1| hypothetical protein OTBS_0112 [Orientia tsutsugamushi str.
Boryong]
gi|148284371|ref|YP_001248461.1| hypothetical protein OTBS_0632 [Orientia tsutsugamushi str.
Boryong]
gi|148284603|ref|YP_001248693.1| hypothetical protein OTBS_1081 [Orientia tsutsugamushi str.
Boryong]
gi|148284641|ref|YP_001248731.1| hypothetical protein OTBS_1161 [Orientia tsutsugamushi str.
Boryong]
gi|148284656|ref|YP_001248746.1| hypothetical protein OTBS_1187 [Orientia tsutsugamushi str.
Boryong]
gi|148285116|ref|YP_001249206.1| hypothetical protein OTBS_2064 [Orientia tsutsugamushi str.
Boryong]
gi|146739485|emb|CAM79178.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
tsutsugamushi str. Boryong]
gi|146739810|emb|CAM79698.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
tsutsugamushi str. Boryong]
gi|146740042|emb|CAM80147.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
tsutsugamushi str. Boryong]
gi|146740080|emb|CAM80227.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
tsutsugamushi str. Boryong]
gi|146740095|emb|CAM80253.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
tsutsugamushi str. Boryong]
gi|146740555|emb|CAM81159.1| tetratricopeptide repeat proteinFT with 5 trp repeats [Orientia
tsutsugamushi str. Boryong]
Length = 220
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 108/202 (53%), Gaps = 3/202 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA +N G +AI +D +K P Y EA I +G AF +L+ AI F AI+ +
Sbjct: 20 NKGIALMNLGYIQNAIENYDIAIKYRPDYAEAYINKGLTLAFLGQLQNAIEHFDLAIKYD 79
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS +++ +G + L EAI+ + A++++PN ADI + +G++ K A+E+
Sbjct: 80 PSCVKSYCNKGYILSLLNRYSEAIESCNIAIKYDPNCADIYYNKGMILEKLGKHQKAIEN 139
Query: 506 LSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ + + A YL G++L S+G+Y KA+E AI+ + N + + + + +
Sbjct: 140 FDIAIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFNLAIKYNPNIIAEYEAMFKKLTE 199
Query: 564 LANSEKALECLQQVLYIDKRFS 585
L N E +Q L I K++S
Sbjct: 200 LENFTGVKE-YEQKLQILKKYS 220
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 34/180 (18%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ +F AI+ EA+ +G A LG AI++ A+++ P+ A+ +G+
Sbjct: 1 MENFDIAIKYRSDNPEAYYNKGIALMNLGYIQNAIENYDIAIKYRPDYAEAYINKGLTLA 60
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+E +K D +Y G LS + Y +A E+ AI+ D N
Sbjct: 61 FLGQLQNAIEHFDLAIKYDPSCVKSYCNKGYILSLLNRYSEAIESCNIAIKYDPN----- 115
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
C + Y+ +G++L LG+H+KAI++ + I
Sbjct: 116 ------------------C-----------ADIYYNKGMILEKLGKHQKAIENFDIAIAI 146
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQ 559
+E+ +K +N AY G+AL ++G + A E + AI+ ++ EA+ G
Sbjct: 1 MENFDIAIKYRSDNPEAYYNKGIALMNLGYIQNAIENYDIAIKYRPDYAEAYINKGLTLA 60
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
F L N A+E + D K+Y +G +L L ++ +AI+ + + DP+
Sbjct: 61 FLGQLQN---AIEHFDLAIKYDPSCVKSYCNKGYILSLLNRYSEAIESCNIAIKYDPNCA 117
Query: 620 ECLYLRASCYHAIGEYREAV 639
+ Y + +G++++A+
Sbjct: 118 DIYYNKGMILEKLGKHQKAI 137
>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
Length = 1979
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 123/254 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A V + A F + + DP Y +AL +G A + + E A+ F ++ N
Sbjct: 350 NRALALVKLQHFGEAAKSFSRTAELDPAYGDALYQQGRLLAREGKYEEALKAFDSMLEQN 409
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A K RG LG EA+ L+++LE EP + + ++G++ F A++
Sbjct: 410 PEFIKAQKLRGTMLIKLGRIEEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKA 469
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L +L +N + + G AL S+ Y++A E + ++L+ + W + L
Sbjct: 470 LEKVAELKPDNDACWMNKGYALYSMDRYEEALEDFEEGLRLNPYLEKGWNNKGIVLGKLG 529
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+E+ALE ++ + + F A+ RGL+L + ++KA + L +P +++ +Y R
Sbjct: 530 RTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEAFDEVLKTNPEDLDSIYNR 589
Query: 626 ASCYHAIGEYREAV 639
+ +G+ A+
Sbjct: 590 GTALLKLGKTETAL 603
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 116/237 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A + K A+ FDQ+L +P +AL +G A A + EAA+ + A++
Sbjct: 43 FNRGLALLKIKKPEEALDSFDQVLHFEPENFDALYKKGIALATLEKFEAALETYDNALEI 102
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + W ++G A A L ++ +I KA+E EP + RG V K ++ A+E
Sbjct: 103 NPDNPKIWYQKGLAFAELEKNEASILCFEKAIELEPECGSAWYARGTVTGKTGNYEEALE 162
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ +N A GL L+++ +Y +A E I+ +AW L
Sbjct: 163 CFEHALEINPKNSDACYSKGLVLANLEKYGEALECFDSLIREKPRHKDAWKQKYFSLIKL 222
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+E+ALEC+ L A + +G+LL+ L +++ A K + L I+P N E
Sbjct: 223 GKNEEALECVDAFLRKFPVSETALYQKGILLNELSRYEDAEKTFTKILKINPGNKEI 279
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G Y A+ F+ L+ +P +A +G A + A+ F I+
Sbjct: 146 ARGTVTGKTGNYEEALECFEHALEINPKNSDACYSKGLVLANLEKYGEALECFDSLIREK 205
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AWK++ + LG++ EA++ + L P S L+++GI+ + + A +
Sbjct: 206 PRHKDAWKQKYFSLIKLGKNEEALECVDAFLRKFPVSETALYQKGILLNELSRYEDAEKT 265
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K++ NK + GLAL + A +A +AI+LD + EAW + L
Sbjct: 266 FTKILKINPGNKEIWLKKGLALIQLLRLNDAIKAFEEAIKLDPTYFEAWNYKCLALMKLE 325
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+ALE VL I + ++ R L L L +A K S +DP+ + LY +
Sbjct: 326 VYEEALEAFDSVLEIYPETKEIWYNRALALVKLQHFGEAAKSFSRTAELDPAYGDALYQQ 385
Query: 626 ASCYHAIGEYREAV 639
G+Y EA+
Sbjct: 386 GRLLAREGKYEEAL 399
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G EGKY A+ FD +L+++P + +A RGT +E A+ ++++ P
Sbjct: 385 QGRLLAREGKYEEALKAFDSMLEQNPEFIKAQKLRGTMLIKLGRIEEALDSLAQSLEKEP 444
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
W ++G G+ A++ L K E +P++ +G + + A+ED
Sbjct: 445 ENYGLWLQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGYALYSMDRYEEALEDF 504
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ + + G+ L +G ++A EA KA+ L +F +AW + + +
Sbjct: 505 EEGLRLNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDD 564
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
EKA E +VL + + + RG L LG+ + A++ L ++P + LY A
Sbjct: 565 YEKASEAFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECFEKILSLNPDYPDLLYSLA 624
Query: 627 SCYHAIGEYREAV 639
+G+ EA+
Sbjct: 625 VAQAKLGKQEEAL 637
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 116/271 (42%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
CV + +S +GI +Y A F +ILK +P E + +G A
Sbjct: 231 CVDAFLRKFPVSETALYQKGILLNELSRYEDAEKTFTKILKINPGNKEIWLKKGLALIQL 290
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
L AI F EAI+ +P+ EAW + A L EA++ LE P + +I +
Sbjct: 291 LRLNDAIKAFEEAIKLDPTYFEAWNYKCLALMKLEVYEEALEAFDSVLEIYPETKEIWYN 350
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R + K + F A + S +LD A G L+ G+Y++A +A ++ +
Sbjct: 351 RALALVKLQHFGEAAKSFSRTAELDPAYGDALYQQGRLLAREGKYEEALKAFDSMLEQNP 410
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
F++A L E+AL+ L Q L + + +GL+L G+ + A+K L
Sbjct: 411 EFIKAQKLRGTMLIKLGRIEEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKAL 470
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ P N C + +++ Y EA+
Sbjct: 471 EKVAELKPDNDACWMNKGYALYSMDRYEEAL 501
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 6/256 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA K+ +A+ +D L+ +P P+ +G A A + EA+I F +AI+ P
Sbjct: 79 KGIALATLEKFEAALETYDNALEINPDNPKIWYQKGLAFAELEKNEASILCFEKAIELEP 138
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
G AW RG G EA++ ALE P ++D + +G+V + + A+E
Sbjct: 139 ECGSAWYARGTVTGKTGNYEEALECFEHALEINPKNSDACYSKGLVLANLEKYGEALECF 198
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEE---AHLKAIQLDRNFLEAWGHLTQFYQD 563
+ ++ +K A+ +L +G+ ++A E A L+ + L G L +
Sbjct: 199 DSLIREKPRHKDAWKQKYFSLIKLGKNEEALECVDAFLRKFPVSETALYQKGILL---NE 255
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L+ E A + ++L I+ + + +GL L L + AIK + +DP+ E
Sbjct: 256 LSRYEDAEKTFTKILKINPGNKEIWLKKGLALIQLLRLNDAIKAFEEAIKLDPTYFEAWN 315
Query: 624 LRASCYHAIGEYREAV 639
+ + Y EA+
Sbjct: 316 YKCLALMKLEVYEEAL 331
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 109/255 (42%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G+ ++ GK+ A+ +++ + P + +G A E A+ DF E ++
Sbjct: 451 LQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGYALYSMDRYEEALEDFEEGLRL 510
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + W +G LG + EA++ KA+ P+ D RG++ D+ A E
Sbjct: 511 NPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASE 570
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+K + E+ + G AL +G+ + A E K + L+ ++ + L L
Sbjct: 571 AFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECFEKILSLNPDYPDLLYSLAVAQAKL 630
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+ALE +++ + K +G +G++ A++ L P + E Y
Sbjct: 631 GKQEEALETFEKLAAKNPEDLKIQRRKGKFAMEIGKYDTALQAFDQVLSEKPESREAWYR 690
Query: 625 RASCYHAIGEYREAV 639
+ + + EA+
Sbjct: 691 KGLALIKLKRFEEAI 705
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 114/567 (20%), Positives = 231/567 (40%), Gaps = 29/567 (5%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
+ F QLE + ++ + AL+ P + +G + + EEA +E ++
Sbjct: 771 KGFAQMQLERYLPALKTFESALEEKPNSDILWYYRGLSLYRINMLEEAAC----AFESSV 826
Query: 135 HQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK 194
+ ++K+ LE R++ C ++ ++L E+ L N + S H K
Sbjct: 827 RLNPEMKEALEY----------RAI-CLFETEQYKAALKALEAVLEGNPE--NLSALHKK 873
Query: 195 SDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSEN 253
+ + + +ET + DP+ + E K + +SG N L E
Sbjct: 874 AICFLQLKKYKSGAETLLRVLELDPN-----NKEVKFELGIASFESG-EYNKALSLFEEV 927
Query: 254 HNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSS 313
GS D S +++ E+N + + I + + +E++ + N + + + +
Sbjct: 928 SEGSDD-SFVYCPEKNSYELNNSEQN---VSEQGISEQNFSEQNNSEQNFSEQNNSEQNF 983
Query: 314 DSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLS-FKWDMLKETSNEAKRNKKFCVTR 372
S+++ N +++ +S+ + S K S+ + S+ K S F W L EA +R
Sbjct: 984 SEQSISEQNNSNQKFSEQNNSKQKFSEQSISKEKYSSFYWKGLVLIRLEAYERALEVFSR 1043
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
++++ + V+ +GI+ ++ A F+++L+ DP Y + G + E
Sbjct: 1044 LTENNPLFVEAWYLKGISHSKLKQHKEAAKDFEKVLELDPAYQDTCYQLGLSYFELGNFE 1103
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI F A++ +P +A R A E+ + L+ P+ + L
Sbjct: 1104 EAIRVFESALKMDPENLDALYMRSLALLRSKRYGESASGFREVLKRNPSDTEALAHLSTA 1163
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+FK + A+ + + E K+ G+AL ++GE K+A ++L +
Sbjct: 1164 SFKQGFYEEALGLFDQVLSKNPERKTVLFRKGVALKALGEVKRASTIFDSVLKLKPDCTY 1223
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
A + +L +A+E + L ++ Y+ RG+ LG ++A++ + L
Sbjct: 1224 ALEQKAYTHFELEEYPEAVEAFKTALEYCQKKEDLYYYRGIAFFRLGNFEEAVRSFENAL 1283
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAV 639
+ E Y Y EY +AV
Sbjct: 1284 DLGCQQPEISYYTGIAYFENREYEKAV 1310
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 141/324 (43%), Gaps = 9/324 (2%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN S+++S + + ++ SRS+ SF+ +E + + + K ++
Sbjct: 1626 LNMYEEASQAFSSALTLKPDNVNALYSRSEASFQLQHFEEAAQDLE---KVLLSAPDFLN 1682
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
SI +RL GIA++ + A+ FD +L++DP + EAL RG E EAA
Sbjct: 1683 SIEACYRL--GIARMELQECEKALEAFDIVLQQDPAHREALYYRGLVLFNLSEYEAAAET 1740
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F ++++P E+ G L A++ KA F P + + L+ K
Sbjct: 1741 FGMLLEASPEDPESLNYLGLCLLELESPEAALKAFEKAALFNPKNEETLYNAATTLIKLN 1800
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH- 556
+++ + + EN Y G+A + Y++A +A A++ D ++A
Sbjct: 1801 RPQESIDYFDRILDISPENLDVLNYKGIAFCKLEMYREALKAFDLALEKDPENIKAIYSV 1860
Query: 557 -LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ F Q + E A + L I+ ++ G+ L + +++ A++ L I
Sbjct: 1861 GVVCFKQKM--YETACRAFDEALAINPWHEQSLKYLGISLAKIEEYEDALRTFDRLLRIR 1918
Query: 616 PSNIECLYLRASCYHAIGEYREAV 639
P +++ + R +G+Y EA+
Sbjct: 1919 PHDVQAMNYRGVILGKLGKYTEAI 1942
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ N +Y +A F +L+ P PE+L G EAA+ F +A NP
Sbjct: 1724 RGLVLFNLSEYEAAAETFGMLLEASPEDPESLNYLGLCLLELESPEAALKAFEKAALFNP 1783
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E L E+I + L+ P + D+L+ +GI K + + A++
Sbjct: 1784 KNEETLYNAATTLIKLNRPQESIDYFDRILDISPENLDVLNYKGIAFCKLEMYREALKAF 1843
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ D EN A +G+ Y+ A A +A+ ++ ++ +L +
Sbjct: 1844 DLALEKDPENIKAIYSVGVVCFKQKMYETACRAFDEALAINPWHEQSLKYLGISLAKIEE 1903
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
E AL ++L I +A + RG++L LG++ +AI + L + P
Sbjct: 1904 YEDALRTFDRLLRIRPHDVQAMNYRGVILGKLGKYTEAINTFNEILRLYP 1953
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A +G Y A+ +FDQ+L ++P L +G A E++ A + F ++ P
Sbjct: 1163 ASFKQGFYEEALGLFDQVLSKNPERKTVLFRKGVALKALGEVKRASTIFDSVLKLKPDCT 1222
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
A +++ L E EA++ ALE+ D+ + RGI F+ +F AV
Sbjct: 1223 YALEQKAYTHFELEEYPEAVEAFKTALEYCQKKEDLYYYRGIAFFRLGNFEEAVRSFENA 1282
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+ L + Y G+A EY+KA E
Sbjct: 1283 LDLGCQQPEISYYTGIAYFENREYEKAVE 1311
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 120/310 (38%), Gaps = 46/310 (14%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+ K+ +D +RG A + GK +A+ F++IL +P YP+ L A+A + E
Sbjct: 575 VLKTNPEDLDSIYNRGTALLKLGKTETALECFEKILSLNPDYPDLLYSLAVAQAKLGKQE 634
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A+ F + NP + +R+G+ +G+ A+Q + L +P S + + +G+
Sbjct: 635 EALETFEKLAAKNPEDLKIQRRKGKFAMEIGKYDTALQAFDQVLSEKPESREAWYRKGLA 694
Query: 493 NFKFKDFNAAVEDLSACVKLDKENK----------------------------------- 517
K K F A+ + + NK
Sbjct: 695 LIKLKRFEEAITAFDEVIVRNLNNKEISNSDYEELKNLDRDDIDNPARDETKRPDYEDEN 754
Query: 518 -----------SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+A TY G A + Y A + A++ N W + +
Sbjct: 755 PDYEDENSDYENARTYKGFAQMQLERYLPALKTFESALEEKPNSDILWYYRGLSLYRINM 814
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A + + ++ +A R + L Q+K A+K L + L +P N+ L+ +A
Sbjct: 815 LEEAACAFESSVRLNPEMKEALEYRAICLFETEQYKAALKALEAVLEGNPENLSALHKKA 874
Query: 627 SCYHAIGEYR 636
C+ + +Y+
Sbjct: 875 ICFLQLKKYK 884
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 14/266 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKED----PMYPEALIGRGTARAFQREL-----EAAISD 437
RG+ + G Y A+ F+Q ED P + L T R RE E + D
Sbjct: 1472 RGLILFSLGYYVEALDSFEQAALEDQTEIPEEIDELSLDETQREKMRESPELEDETRLED 1531
Query: 438 FTEAIQ--SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
E + S + W + G ++ L AI+ K LE +P ++D+ + G+
Sbjct: 1532 KFELKEKLSETELEDVWMKMGLSQLKLEHYEAAIEIFEKLLEVKPEASDLWYVAGLALRG 1591
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
AVE V+LD ++A+ +GL+L + Y++A +A A+ L + + A
Sbjct: 1592 LDQDEQAVEAFENAVELDPALEAAWEQIGLSLLRLNMYEEASQAFSSALTLKPDNVNALY 1651
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRF---SKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
++ L + E+A + L++VL F +A + G+ L + +KA++ L
Sbjct: 1652 SRSEASFQLQHFEEAAQDLEKVLLSAPDFLNSIEACYRLGIARMELQECEKALEAFDIVL 1711
Query: 613 GIDPSNIECLYLRASCYHAIGEYREA 638
DP++ E LY R + EY A
Sbjct: 1712 QQDPAHREALYYRGLVLFNLSEYEAA 1737
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 75/154 (48%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L RG+ K K A++ + + EN A G+AL+++ +++ A E + A++
Sbjct: 42 LFNRGLALLKIKKPEEALDSFDQVLHFEPENFDALYKKGIALATLEKFEAALETYDNALE 101
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + + W + +L +E ++ C ++ + ++ A++ RG + G +++A+
Sbjct: 102 INPDNPKIWYQKGLAFAELEKNEASILCFEKAIELEPECGSAWYARGTVTGKTGNYEEAL 161
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ L I+P N + Y + + +Y EA+
Sbjct: 162 ECFEHALEINPKNSDACYSKGLVLANLEKYGEAL 195
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 3/167 (1%)
Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
K+ S+ DF +RG+ + Y A FD++LK +P +++ RGTA
Sbjct: 538 FEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEAFDEVLKTNPEDLDSIYNRGTALLKLG 597
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E A+ F + + NP + A+A LG+ EA++ K P I +
Sbjct: 598 KTETALECFEKILSLNPDYPDLLYSLAVAQAKLGKQEEALETFEKLAAKNPEDLKIQRRK 657
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
G + ++ A++ + E++ A+ GLAL + +++A
Sbjct: 658 GKFAMEIGKYDTALQAFDQVLSEKPESREAWYRKGLALIKLKRFEEA 704
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA Y A+ FD L++DP +A+ G Q+ E A F EA+ NP
Sbjct: 1826 KGIAFCKLEMYREALKAFDLALEKDPENIKAIYSVGVVCFKQKMYETACRAFDEALAINP 1885
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ K G + A + E +A++ + L P+ ++ RG++ K + A+
Sbjct: 1886 WHEQSLKYLGISLAKIEEYEDALRTFDRLLRIRPHDVQAMNYRGVILGKLGKYTEAINTF 1945
Query: 507 SACVKLDKENKSA 519
+ ++L E A
Sbjct: 1946 NEILRLYPEMADA 1958
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 98/235 (41%), Gaps = 16/235 (6%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RGIA G + A+ F+ L PE G A RE E A+ F
Sbjct: 1257 DLYYYRGIAFFRLGNFEEAVRSFENALDLGCQQPEISYYTGIAYFENREYEKAVEIFNAI 1316
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN- 500
+ S E ++ A L + E + + LE E + +I + G KF++ N
Sbjct: 1317 LDSGALDLEILYKKALALFELEKPEEVVSTVYTLLELETENFNI-KDAG----KFEEENY 1371
Query: 501 ------AAVEDLSACVKLDKENKSAYTYL----GLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ + +A EN A+ L +L +G Y++A K +
Sbjct: 1372 EESAGKESIGEENAGEIPAFENTKAFEELLEKFTFSLIQLGRYEEALLPLGKLTASESAS 1431
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
EA +Q+L SE+ALE ++ ++ F KA++ RGL+L LG + +A+
Sbjct: 1432 KEALYSKGIVFQELGRSEEALEIFSELRFLYPDFEKAWYRRGLILFSLGYYVEAL 1486
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 118/303 (38%), Gaps = 48/303 (15%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V FR +G+A G+ A +IFD +LK P AL + E A+ F
Sbjct: 1189 TVLFR--KGVALKALGEVKRASTIFDSVLKLKPDCTYALEQKAYTHFELEEYPEAVEAFK 1246
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A++ + + RG A LG EA++ AL+ +I + GI F+ +++
Sbjct: 1247 TALEYCQKKEDLYYYRGIAFFRLGNFEEAVRSFENALDLGCQQPEISYYTGIAYFENREY 1306
Query: 500 NAAVEDLSACV------------------KLDKENK---SAYTYLGLAL----------- 527
AVE +A + +L+K + + YT L L
Sbjct: 1307 EKAVEIFNAILDSGALDLEILYKKALALFELEKPEEVVSTVYTLLELETENFNIKDAGKF 1366
Query: 528 -----------SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
SIGE E + A + + F E T L E+AL L +
Sbjct: 1367 EEENYEESAGKESIGEENAGE---IPAFENTKAFEELLEKFTFSLIQLGRYEEALLPLGK 1423
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ + +A + +G++ LG+ ++A++ S + P + Y R ++G Y
Sbjct: 1424 LTASESASKEALYSKGIVFQELGRSEEALEIFSELRFLYPDFEKAWYRRGLILFSLGYYV 1483
Query: 637 EAV 639
EA+
Sbjct: 1484 EAL 1486
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 423 TARAF-QRELE---AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
T + F Q +LE A+ F A++ P++ W RG + + EA ++
Sbjct: 769 TYKGFAQMQLERYLPALKTFESALEEKPNSDILWYYRGLSLYRINMLEEAACAFESSVRL 828
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
P + L R I F+ + + AA++ L A ++ + EN SA + + +YK E
Sbjct: 829 NPEMKEALEYRAICLFETEQYKAALKALEAVLEGNPENLSALHKKAICFLQLKKYKSGAE 888
Query: 539 AHLKAIQLDRN 549
L+ ++LD N
Sbjct: 889 TLLRVLELDPN 899
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G+ + Y +A FD+ L +P + ++L G + A E E A+ F ++
Sbjct: 1859 SVGVVCFKQKMYETACRAFDEALAINPWHEQSLKYLGISLAKIEEYEDALRTFDRLLRIR 1918
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
P +A RG LG+ EAI ++ L P AD
Sbjct: 1919 PHDVQAMNYRGVILGKLGKYTEAINTFNEILRLYPEMAD 1957
>gi|91772658|ref|YP_565350.1| TPR repeat-containing protein [Methanococcoides burtonii DSM 6242]
gi|91711673|gb|ABE51600.1| Tetratricopeptide repeat protein [Methanococcoides burtonii DSM
6242]
Length = 1049
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 29/284 (10%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS- 444
++ AQ G Y AI+ +D ILK P P +G A + + E AI + +A+ S
Sbjct: 68 NKAAAQYLYGDYDEAIATYDHILKLQPGSPLIFTKKGMVLAKKGDYENAIKTYDKALMSI 127
Query: 445 ---------------NPSAGEAW-------------KRRGQARAALGESVEAIQDLSKAL 476
N S A+ + ++ LG + EAIQ K L
Sbjct: 128 SKYILGNTLNDTSELNGSTSTAYIIEELGVDESMILYHKAKSLEGLGRNEEAIQLYEKFL 187
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E + + L+E+G+ + + A+E +++D +N++ + G A S+G Y++A
Sbjct: 188 EIQLEHSMTLYEKGLDHARDGKSERAIELYDEALQIDPDNRTIWYSKGQAFDSLGLYEEA 247
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
E++ KAI+ D ++ W + Y L E A+ ++VL +D ++A+ G+ L
Sbjct: 248 IESYNKAIEFDSTDVKVWWNKALDYDKLDKKEDAIISYREVLVLDLYNAEAWFNLGVALE 307
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
G G + +AI L +DP NI+ + + + IG + EA++
Sbjct: 308 GTGNYFEAINSFEQVLLLDPDNIDAWHKKGLVLNKIGRFDEALV 351
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 119/287 (41%), Gaps = 35/287 (12%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDP-----------------MYPEALIGRGTARAFQR 429
+G+ +GK AI ++D+ L+ DP +Y EA+ A F
Sbjct: 200 KGLDHARDGKSERAIELYDEALQIDPDNRTIWYSKGQAFDSLGLYEEAIESYNKAIEFDS 259
Query: 430 -----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
+ E AI + E + + EAW G A G EAI
Sbjct: 260 TDVKVWWNKALDYDKLDKKEDAIISYREVLVLDLYNAEAWFNLGVALEGTGNYFEAINSF 319
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+ L +P++ D H++G+V K F+ A+ + +K++ +N + A++S+
Sbjct: 320 EQVLLLDPDNIDAWHKKGLVLNKIGRFDEALVSYDSALKINPDNIAKIYTSNPAIASLNT 379
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ E + + + + W Y L++ E+A+ ++VL +D + + ++ +
Sbjct: 380 -SQFSECYAAIPSFNSDSAKIWYDKGTLYLGLSDYEEAVLSFEKVLELDSKHAVVWYKKA 438
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L L LG + +AI + L DPS YL+ G Y+EAV
Sbjct: 439 LALDKLGNYNEAIICYTEALRRDPSCPNVWYLKGYDLDTTGRYKEAV 485
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 39/267 (14%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDP-----------------MYPEALIGRGTARAFQRE 430
G+A G Y AI+ F+Q+L DP + EAL+ +A +
Sbjct: 303 GVALEGTGNYFEAINSFEQVLLLDPDNIDAWHKKGLVLNKIGRFDEALVSYDSALKINPD 362
Query: 431 LEAAI------------SDFTEAIQSNPS----AGEAWKRRGQARAALGESVEAIQDLSK 474
A I S F+E + PS + + W +G L + EA+ K
Sbjct: 363 NIAKIYTSNPAIASLNTSQFSECYAAIPSFNSDSAKIWYDKGTLYLGLSDYEEAVLSFEK 422
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
LE + A + +++ + K ++N A+ + ++ D + + G L + G YK
Sbjct: 423 VLELDSKHAVVWYKKALALDKLGNYNEAIICYTEALRRDPSCPNVWYLKGYDLDTTGRYK 482
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE---KALECLQQVLYIDKRFSKAYHLR 591
+A + K ++LD F AW L DLA+ + +A+ QV+ + FS AY+ +
Sbjct: 483 EAVSCYRKTVELDPQFTLAWYALG---LDLAHMDEHSEAIAAYDQVIEQNSDFSDAYYRK 539
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSN 618
G L LG ++ AI+ + +D SN
Sbjct: 540 GRTLDKLGLYQDAIESYRVAISLDSSN 566
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+A + +G + + E A+ + +AI P++ W RGQ LG+ AI + KA
Sbjct: 634 DAWVAKGGSLFVKGSYENALLSYNKAIMIKPNSSVTWYMRGQTYEMLGDRSSAINNYEKA 693
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ + + D +K ++ A++ + LD ENK+A G A IG Y+
Sbjct: 694 VDLDSSYKDAWFALAQNVYKSSNYYYAIQAYDGLLNLDPENKTALLQKGQAYDKIGIYRS 753
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
+ ++ K +++D + EAW +L N E A+ +VL D + + L+L
Sbjct: 754 SLASYNKLLKVDTDNTEAWYLRGLASYNLGNLEDAVYSYDKVLSSDPQNIDVLLAQSLVL 813
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
LG + +I + L + + L + + Y +G Y++A
Sbjct: 814 EDLGLFEDSINNYDKVLEMKVDDPSVLMKKGNVYEKLGLYKDA 856
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 117/279 (41%), Gaps = 33/279 (11%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ AI ++++ L+ + L +G A + E AI + EA+Q +P W
Sbjct: 174 GRNEEAIQLYEKFLEIQLEHSMTLYEKGLDHARDGKSERAIELYDEALQIDPDNRTIWYS 233
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+GQA +LG EAI+ +KA+EF+ + + + K A+ + LD
Sbjct: 234 KGQAFDSLGLYEEAIESYNKAIEFDSTDVKVWWNKALDYDKLDKKEDAIISYREVLVLDL 293
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANS 567
N A+ LG+AL G Y +A + + + LD + ++AW + +F + L +
Sbjct: 294 YNAEAWFNLGVALEGTGNYFEAINSFEQVLLLDPDNIDAWHKKGLVLNKIGRFDEALVSY 353
Query: 568 EKAL--------------------------ECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+ AL EC + + +K ++ +G L GL +
Sbjct: 354 DSALKINPDNIAKIYTSNPAIASLNTSQFSECYAAIPSFNSDSAKIWYDKGTLYLGLSDY 413
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
++A+ L +D + Y +A +G Y EA+I
Sbjct: 414 EEAVLSFEKVLELDSKHAVVWYKKALALDKLGNYNEAII 452
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 103/254 (40%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A N G A+ +D++L DP + L+ + E +I+++ + ++
Sbjct: 775 RGLASYNLGNLEDAVYSYDKVLSSDPQNIDVLLAQSLVLEDLGLFEDSINNYDKVLEMKV 834
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++G LG +A L EP ++ L +G + D+ A++
Sbjct: 835 DDPSVLMKKGNVYEKLGLYKDANDCYDIVLINEPANSLALSRKGFNLYMLGDYIGAMDQY 894
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + +A+ G Y + + +LKA++L + AW +L +
Sbjct: 895 DLVIAKNPYDAAAWYNKGNVAYLTSSYAGSTQFYLKAVELQPKSITAWYNLGYIANIRGD 954
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ A+ ++ L ID + A + + + +GQ A + IDP I L R
Sbjct: 955 VDTAITYYEKALAIDPNAASALYNKRFAHYRVGQSVSAETERKKLDVIDPEFIVALDDRG 1014
Query: 627 SCYHAIGEYREAVI 640
+ + EY A++
Sbjct: 1015 TKFFTPDEYDPAIV 1028
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 6/253 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G A G Y S+++ ++++LK D EA RG A LE A+ + + + S
Sbjct: 739 LQKGQAYDKIGIYRSSLASYNKLLKVDTDNTEAWYLRGLASYNLGNLEDAVYSYDKVLSS 798
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P + + LG ++I + K LE + + +L ++G V K + A +
Sbjct: 799 DPQNIDVLLAQSLVLEDLGLFEDSINNYDKVLEMKVDDPSVLMKKGNVYEKLGLYKDAND 858
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFY 561
+ + N A + G L +G+Y A + + I + AW G++
Sbjct: 859 CYDIVLINEPANSLALSRKGFNLYMLGDYIGAMDQYDLVIAKNPYDAAAWYNKGNVAYLT 918
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
A S + L+ V K + Y+L G + + G AI L IDP+
Sbjct: 919 SSYAGSTQF--YLKAVELQPKSITAWYNL-GYIANIRGDVDTAITYYEKALAIDPNAASA 975
Query: 622 LYLRASCYHAIGE 634
LY + ++ +G+
Sbjct: 976 LYNKRFAHYRVGQ 988
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 29/218 (13%)
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
++ G A G +AI+ AL +PN L + + + D++ A+ +
Sbjct: 31 SFNEEGVALMLNGTYDKAIEKYDLALVSDPNYRIALENKAAAQYLYGDYDEAIATYDHIL 90
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-------------------- 550
KL + +T G+ L+ G+Y+ A + + KA+ +
Sbjct: 91 KLQPGSPLIFTKKGMVLAKKGDYENAIKTYDKALMSISKYILGNTLNDTSELNGSTSTAY 150
Query: 551 -LEAWG--------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+E G H + + L +E+A++ ++ L I S + +GL G+
Sbjct: 151 IIEELGVDESMILYHKAKSLEGLGRNEEAIQLYEKFLEIQLEHSMTLYEKGLDHARDGKS 210
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++AI+ L IDP N Y + + ++G Y EA+
Sbjct: 211 ERAIELYDEALQIDPDNRTIWYSKGQAFDSLGLYEEAI 248
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI + + L+ DP P +G + A+S + + ++ +P AW
Sbjct: 445 GNYNEAIICYTEALRRDPSCPNVWYLKGYDLDTTGRYKEAVSCYRKTVELDPQFTLAWYA 504
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G A + E EAI + +E + +D + +G K + A+E + LD
Sbjct: 505 LGLDLAHMDEHSEAIAAYDQVIEQNSDFSDAYYRKGRTLDKLGLYQDAIESYRVAISLDS 564
Query: 515 ENKSA 519
N +A
Sbjct: 565 SNSAA 569
>gi|145482337|ref|XP_001427191.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394271|emb|CAK59793.1| unnamed protein product [Paramecium tetraurelia]
Length = 610
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 145/297 (48%), Gaps = 14/297 (4%)
Query: 357 ETSNEAKRNKK----FCVTRISKS-----KSISVDFRLS-----RGIAQVNEGKYASAIS 402
+ N++ RNKK C+ + ++ ++IS++ + S +G ++ A+
Sbjct: 174 DPQNQSARNKKGNALICLKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQHQEALK 233
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+++ + +P +A G+G ++ + AI F EAI NP +AW +G A A L
Sbjct: 234 SYEESILINPQQIDAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNALAKL 293
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
+ EAIQ +KA+ +P + +G+ + + + A++ + + ++ + A+
Sbjct: 294 NQYQEAIQSFNKAISIDPKCVYAFYNKGLALARLQHYREAIKCYNEAISINPKYGYAFYN 353
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
G +L+ + Y++A + + +AI ++ F AW + L + A++ + + I+
Sbjct: 354 KGNSLARLQHYQEAIKCYDEAIFINPKFDTAWNIKGKVLVLLTYYQHAIKSFDEAISINP 413
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+++ A+ +G L L Q+++AIK + I+P + + + ++ +Y+EA+
Sbjct: 414 QYNDAWFSKGQALARLKQYQEAIKSFDEAISINPEQNDAWFSKGQALASLKQYQEAI 470
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 134/278 (48%), Gaps = 16/278 (5%)
Query: 376 SKSISVDFRLSRGIAQVNEGK-------YASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+++IS++ ++ AQ N+G Y AI +D+ + DP A +G A
Sbjct: 134 NQTISINPKVFN--AQKNKGNALAKLKLYQEAIKCYDEAISIDPQNQSARNKKGNALICL 191
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + AI + EAI NP WK +G A L + EA++ +++ P D +
Sbjct: 192 KQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQHQEALKSYEESILINPQQIDAWYG 251
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G+V + K + A++ + ++ + A+ G AL+ + +Y++A ++ KAI +D
Sbjct: 252 KGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNALAKLNQYQEAIQSFNKAISIDP 311
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A+ + L + +A++C + + I+ ++ A++ +G L L +++AIK
Sbjct: 312 KCVYAFYNKGLALARLQHYREAIKCYNEAISINPKYGYAFYNKGNSLARLQHYQEAIKCY 371
Query: 609 SSGLGIDPS-----NI--ECLYLRASCYHAIGEYREAV 639
+ I+P NI + L L HAI + EA+
Sbjct: 372 DEAIFINPKFDTAWNIKGKVLVLLTYYQHAIKSFDEAI 409
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 129/256 (50%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
+L+ G++ V +Y AI +D+ + +P Y A G+G A A ++ + AI + +AI
Sbjct: 11 QLALGLSLVCLKQYNEAIKCYDEAISINPKYASAWQGKGQALANLKQYQEAIKCYDQAIS 70
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+P AW+ +GQA A L + EAI+ +A+ +P + +G+ + K++ A+
Sbjct: 71 IDPKYASAWQGKGQALANLKQYQEAIKCYDQAISIDPKYYPTYYYKGLSLAELKEYQEAI 130
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ + + ++ + +A G AL+ + Y++A + + +AI +D A
Sbjct: 131 KCYNQTISINPKVFNAQKNKGNALAKLKLYQEAIKCYDEAISIDPQNQSARNKKGNALIC 190
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L ++A++C + + I+ +FS + +G L L QH++A+K + I+P I+ Y
Sbjct: 191 LKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQHQEALKSYEESILINPQQIDAWY 250
Query: 624 LRASCYHAIGEYREAV 639
+ + +Y+ A+
Sbjct: 251 GKGLVLTQLKQYKHAI 266
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 125/253 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A N +Y AI +DQ + DP Y A G+G A A ++ + AI + +AI +P
Sbjct: 48 KGQALANLKQYQEAIKCYDQAISIDPKYASAWQGKGQALANLKQYQEAIKCYDQAISIDP 107
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +G + A L E EAI+ ++ + P + +G K K + A++
Sbjct: 108 KYYPTYYYKGLSLAELKEYQEAIKCYNQTISINPKVFNAQKNKGNALAKLKLYQEAIKCY 167
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +D +N+SA G AL + +Y++A + + +AI ++ F W + +L
Sbjct: 168 DEAISIDPQNQSARNKKGNALICLKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQ 227
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++AL+ ++ + I+ + A++ +GL+L L Q+K AI+ + I+P + +
Sbjct: 228 HQEALKSYEESILINPQQIDAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKG 287
Query: 627 SCYHAIGEYREAV 639
+ + +Y+EA+
Sbjct: 288 NALAKLNQYQEAI 300
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 130/268 (48%), Gaps = 5/268 (1%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++IS+D + + +G A N +Y AI +DQ + DP Y +G + A +E
Sbjct: 67 QAISIDPKYASAWQGKGQALANLKQYQEAIKCYDQAISIDPKYYPTYYYKGLSLAELKEY 126
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI + + I NP A K +G A A L EAI+ +A+ +P + +++G
Sbjct: 127 QEAIKCYNQTISINPKVFNAQKNKGNALAKLKLYQEAIKCYDEAISIDPQNQSARNKKGN 186
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K + A++ + ++ + + + G L+ + ++++A +++ ++I ++ +
Sbjct: 187 ALICLKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQHQEALKSYEESILINPQQI 246
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+AW L + A++ + + I+ +++ A++ +G L L Q+++AI+ +
Sbjct: 247 DAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNALAKLNQYQEAIQSFNKA 306
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ IDP + Y + + YREA+
Sbjct: 307 ISIDPKCVYAFYNKGLALARLQHYREAI 334
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 112/237 (47%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +G+ +Y AI FD+ + +P Y +A G+G A A + + AI F +
Sbjct: 246 IDAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNALAKLNQYQEAIQSFNK 305
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI +P A+ +G A A L EAI+ ++A+ P + +G + + +
Sbjct: 306 AISIDPKCVYAFYNKGLALARLQHYREAIKCYNEAISINPKYGYAFYNKGNSLARLQHYQ 365
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++ + ++ + +A+ G L + Y+ A ++ +AI ++ + +AW Q
Sbjct: 366 EAIKCYDEAIFINPKFDTAWNIKGKVLVLLTYYQHAIKSFDEAISINPQYNDAWFSKGQA 425
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
L ++A++ + + I+ + A+ +G L L Q+++AIK + I+P+
Sbjct: 426 LARLKQYQEAIKSFDEAISINPEQNDAWFSKGQALASLKQYQEAIKSYDEAIFINPN 482
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 113/243 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI ++Q + +P A +G A A + + AI + EAI +P A ++G
Sbjct: 126 YQEAIKCYNQTISINPKVFNAQKNKGNALAKLKLYQEAIKCYDEAISIDPQNQSARNKKG 185
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A L + EAI+ +A+ P +++ +G + A++ + ++ +
Sbjct: 186 NALICLKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQHQEALKSYEESILINPQQ 245
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A+ GL L+ + +YK A ++ +AI ++ + +AW L ++A++ +
Sbjct: 246 IDAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNALAKLNQYQEAIQSFNK 305
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ ID + A++ +GL L L +++AIK + + I+P Y + + + Y+
Sbjct: 306 AISIDPKCVYAFYNKGLALARLQHYREAIKCYNEAISINPKYGYAFYNKGNSLARLQHYQ 365
Query: 637 EAV 639
EA+
Sbjct: 366 EAI 368
>gi|406884144|gb|EKD31608.1| hypothetical protein ACD_77C00293G0006 [uncultured bacterium]
Length = 337
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 4/224 (1%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ + + ++ P EAL RG A+ R+ AI D+ AIQ + + +AW RG
Sbjct: 71 YNGALDDYTKSIELKPEDAEALFYRGQAKEGLRKYRDAIEDYIRAIQIDSTNAKAWFSRG 130
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ L EAI DL+KA++ +P + + + R D+ A+ D S + + +
Sbjct: 131 SMKIKLRYYEEAIFDLTKAIDLDPRNPEAFYNRAEARRLTFDYYGAISDYSRDIDMSPND 190
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECL 574
A+ GL S++ ++ A+ + KA+ D + L W + +T+F L + + A+
Sbjct: 191 VYAFINRGLCKSNLKDFAGAQADYTKAVDSDPDLLSGWYNRGVTKF--ALEDYDGAIADF 248
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ L + + AY+ RGL L AI D + LGIDP+N
Sbjct: 249 TKALEMSPNLTAAYNNRGLSKFSLKDLTGAISDYNKALGIDPAN 292
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Query: 376 SKSISVDFRLSRGIAQVNEGK-----YASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D R E + Y AIS + + + P A I RG ++ ++
Sbjct: 147 TKAIDLDPRNPEAFYNRAEARRLTFDYYGAISDYSRDIDMSPNDVYAFINRGLCKSNLKD 206
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
A +D+T+A+ S+P W RG + AL + AI D +KALE PN + RG
Sbjct: 207 FAGAQADYTKAVDSDPDLLSGWYNRGVTKFALEDYDGAIADFTKALEMSPNLTAAYNNRG 266
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ F KD A+ D + + +D N AY G+A + G+ A E KA +L
Sbjct: 267 LSKFSLKDLTGAISDYNKALGIDPANSKAYLNRGVAKQNAGDKAGACEDWKKAGELGEK- 325
Query: 551 LEAWGHLTQF 560
EA+ + +F
Sbjct: 326 -EAFALIKEF 334
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 4/223 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A+ KY AI + + ++ D +A RG+ + R E AI D T+AI +P
Sbjct: 95 RGQAKEGLRKYRDAIEDYIRAIQIDSTNAKAWFSRGSMKIKLRYYEEAIFDLTKAIDLDP 154
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EA+ R +AR + AI D S+ ++ PN RG+ KDF A D
Sbjct: 155 RNPEAFYNRAEARRLTFDYYGAISDYSRDIDMSPNDVYAFINRGLCKSNLKDFAGAQADY 214
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDL 564
+ V D + S + G+ ++ +Y A KA+++ N A+ + L++F L
Sbjct: 215 TKAVDSDPDLLSGWYNRGVTKFALEDYDGAIADFTKALEMSPNLTAAYNNRGLSKF--SL 272
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ + L ID SKAY RG+ G A +D
Sbjct: 273 KDLTGAISDYNKALGIDPANSKAYLNRGVAKQNAGDKAGACED 315
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+AD+ + G+ KD+N A+ D S VKL+ A+ + A S+ +Y A + +
Sbjct: 20 TADVFYNSGLDKHNKKDYNGAISDYSNAVKLNPLLAIAWYNMASAKLSLEDYNGALDDYT 79
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
K+I+L EA + Q + L A+E + + ID +KA+ RG + L +
Sbjct: 80 KSIELKPEDAEALFYRGQAKEGLRKYRDAIEDYIRAIQIDSTNAKAWFSRGSMKIKLRYY 139
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++AI DL+ + +DP N E Y RA +Y A+
Sbjct: 140 EEAIFDLTKAIDLDPRNPEAFYNRAEARRLTFDYYGAI 177
>gi|456352577|dbj|BAM87022.1| conserved exported hypothetical protein [Agromonas oligotrophica
S58]
Length = 431
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 5/238 (2%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+RL + + G A + + DP EA RG QR L+ A++D+ +AI
Sbjct: 78 YRLRGDLMREAGGDAGKATADLSMAISLDPNDAEAYELRGVVYTGQRRLDRALADYDQAI 137
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P +A+ RG A G++ +A++D +A+ +P+ RG K + + A
Sbjct: 138 RLKPDYAQAYADRGVAFYLRGDNEKAVRDYDEAIRLDPDRPRTFTNRGAAYKKLGEMDKA 197
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQF 560
+ D S ++ D + Y GL +++ +Y KA + +AI+L NFL G QF
Sbjct: 198 LADDSEAIRRDPKVPEYYDNRGLTHAAMKDYDKAIADYDQAIRLQPKPNFLTNRGDAYQF 257
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+L + AL L +D F+ Y+ R +L +G+ KA+ D + L +DP N
Sbjct: 258 KNELGS---ALNDYDAALRLDPGFALTYNNRAVLFKKMGERAKALADYEAALRLDPGN 312
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 1/178 (0%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
G +A++DL +A+ + +A RG ++ D A DLS + LD + AY
Sbjct: 55 GGLTQALKDLDRAIALDGKNARAYRLRGDLMREAGGDAGKATADLSMAISLDPNDAEAYE 114
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G+ + +A + +AI+L ++ +A+ + ++EKA+ + + +D
Sbjct: 115 LRGVVYTGQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVRDYDEAIRLD 174
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + RG LG+ KA+ D S + DP E R + A+ +Y +A+
Sbjct: 175 PDRPRTFTNRGAAYKKLGEMDKALADDSEAIRRDPKVPEYYDNRGLTHAAMKDYDKAI 232
>gi|384209207|ref|YP_005594927.1| hypothetical protein Bint_1731 [Brachyspira intermedia PWS/A]
gi|343386857|gb|AEM22347.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 357
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 1/260 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ +RG+A+ + G Y AIS F++++ D Y A G + E AI +
Sbjct: 37 SVEIYNNRGLAKSSLGMYEEAISDFEKVISIDAEYVNAYNNIGLVKHNLGMYEEAIDYYK 96
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+ + +A+ G A LG EAI+ KA+E PN + G++ +
Sbjct: 97 KALSLDNKCIQAFNNIGLANHNLGMYEEAIKYYIKAIEISPN-VHTYNNIGLIKNDLGMY 155
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E + ++LD AY +GL+ ++ +Y +A E K ++LD + ++ ++
Sbjct: 156 EEAIEYFNKVIRLDNNYIKAYYNIGLSKYNLKKYDEALEYFNKVLELDSKNIHSYNNIGI 215
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
QDL +ALE + L +DK +SKAY+ RGL L ++ A+ D + L ++P+
Sbjct: 216 IKQDLKQHSEALEYFNKALALDKNYSKAYYNRGLSELELELYECALYDFNRCLELEPNYY 275
Query: 620 ECLYLRASCYHAIGEYREAV 639
R + YREA+
Sbjct: 276 PACCKRGEVKLKLKNYREAL 295
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 116/252 (46%), Gaps = 1/252 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + N G Y AI + + L D +A G A E AI + +AI+ +P+
Sbjct: 79 GLVKHNLGMYEEAIDYYKKALSLDNKCIQAFNNIGLANHNLGMYEEAIKYYIKAIEISPN 138
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ G + LG EAI+ +K + + N + G+ + K ++ A+E +
Sbjct: 139 V-HTYNNIGLIKNDLGMYEEAIEYFNKVIRLDNNYIKAYYNIGLSKYNLKKYDEALEYFN 197
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD +N +Y +G+ + ++ +A E KA+ LD+N+ +A+ + +L
Sbjct: 198 KVLELDSKNIHSYNNIGIIKQDLKQHSEALEYFNKALALDKNYSKAYYNRGLSELELELY 257
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E AL + L ++ + A RG + L +++A++D + + + + Y R
Sbjct: 258 ECALYDFNRCLELEPNYYPACCKRGEVKLKLKNYREALEDFNYYIEHSNPDKQIYYYRGF 317
Query: 628 CYHAIGEYREAV 639
C + + +Y A+
Sbjct: 318 CKYKLKDYNNAI 329
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + + +++ A+ F++ L D Y +A RG + E A+ DF ++ P+
Sbjct: 214 GIIKQDLKQHSEALEYFNKALALDKNYSKAYYNRGLSELELELYECALYDFNRCLELEPN 273
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A +RG+ + L EA++D + +E I + RG +K KD+N A++D +
Sbjct: 274 YYPACCKRGEVKLKLKNYREALEDFNYYIEHSNPDKQIYYYRGFCKYKLKDYNNAIKDFN 333
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 35/197 (17%)
Query: 458 ARAALG--ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A A G + ++++ K + + +S +I + RG+ + A+ D + +D E
Sbjct: 11 ANKAFGSADYKKSLEYFDKLIFYYGDSVEIYNNRGLAKSSLGMYEEAISDFEKVISIDAE 70
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL-------------TQFY- 561
+AY +GL ++G Y++A + + KA+ LD ++A+ ++ ++Y
Sbjct: 71 YVNAYNNIGLVKHNLGMYEEAIDYYKKALSLDNKCIQAFNNIGLANHNLGMYEEAIKYYI 130
Query: 562 -------------------QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
DL E+A+E +V+ +D + KAY+ GL + L ++
Sbjct: 131 KAIEISPNVHTYNNIGLIKNDLGMYEEAIEYFNKVIRLDNNYIKAYYNIGLSKYNLKKYD 190
Query: 603 KAIKDLSSGLGIDPSNI 619
+A++ + L +D NI
Sbjct: 191 EALEYFNKVLELDSKNI 207
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 1/222 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A N G Y AI + + ++ P G + E AI F + I+ + +
Sbjct: 113 GLANHNLGMYEEAIKYYIKAIEISPN-VHTYNNIGLIKNDLGMYEEAIEYFNKVIRLDNN 171
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G ++ L + EA++ +K LE + + + GI+ K + A+E +
Sbjct: 172 YIKAYYNIGLSKYNLKKYDEALEYFNKVLELDSKNIHSYNNIGIIKQDLKQHSEALEYFN 231
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ LDK AY GL+ + Y+ A + ++L+ N+ A + L N
Sbjct: 232 KALALDKNYSKAYYNRGLSELELELYECALYDFNRCLELEPNYYPACCKRGEVKLKLKNY 291
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ALE + + Y+ RG + L + AIKD +
Sbjct: 292 REALEDFNYYIEHSNPDKQIYYYRGFCKYKLKDYNNAIKDFN 333
>gi|404477129|ref|YP_006708560.1| hypothetical protein B2904_orf2487 [Brachyspira pilosicoli B2904]
gi|404438618|gb|AFR71812.1| TPR domain-containing protein [Brachyspira pilosicoli B2904]
Length = 537
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ N G Y AI FD+ ++ D Y A RG ++A E AI DF +AI+ N
Sbjct: 331 NRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAIELN 390
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG A+ L + EAI+D KA+E PN+ D + RG + A++D
Sbjct: 391 PNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNNLDAYNNRGSAKAILMQYKEAIKD 450
Query: 506 LSACVKLDKENKSAYTYLGLA---LSSIGE 532
+KL N AY + L L++I E
Sbjct: 451 FDKAIKLKANNAQAYLNMILPKQLLANITE 480
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 72/121 (59%)
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
AY G+A +++G Y++A + KAI+LD N+L A+ + L N+E+A++ + +
Sbjct: 328 AYNNRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAI 387
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
++ S+AY+ RG + L Q+++AIKD + ++P+N++ R S + +Y+EA
Sbjct: 388 ELNPNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNNLDAYNNRGSAKAILMQYKEA 447
Query: 639 V 639
+
Sbjct: 448 I 448
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ RG A+ LG EAI+D KA+E + N + RGI K + A++D + +
Sbjct: 328 AYNNRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAI 387
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQFYQD 563
+L+ AY G A +++ +Y++A + + KAI+L+ N L+A+ + L Q+ +
Sbjct: 388 ELNPNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNNLDAYNNRGSAKAILMQYKEA 447
Query: 564 LANSEKALEC 573
+ + +KA++
Sbjct: 448 IKDFDKAIKL 457
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 20 ICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSYEIQDICN 74
I + D+ + +DS SA R I AKL ++++++KAI L+ ++++Y N
Sbjct: 346 IKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAIE-LNPNISEAYN-----N 399
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
R + L+ ++ I+D DKA++L+P L AY +G A + L + +EA+ ++K
Sbjct: 400 RGNAKNNLKQYEEAIKDYDKAIELNPNNLDAYNNRGSAKAILMQYKEAIKDFDKA 454
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 47 CSLRNWSKAIRILDSLLAQ-------------SYEIQDICNRAFCYSQLELHKHVIRDCD 93
S+ ++K I + D+LL + +Y I NR + L L++ I+D D
Sbjct: 292 LSINYYNKIIEMTDNLLKEYDENSEKYSKYKNNYLIA-YNNRGIAKNNLGLYEEAIKDFD 350
Query: 94 KALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
KA++LD L AY +G + + LG EEA+ + K E
Sbjct: 351 KAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAIE 388
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%)
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N+L A+ + +L E+A++ + + +D + AY+ RG+ LG +++AIKD
Sbjct: 324 NYLIAYNNRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDF 383
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + ++P+ E R + + + +Y EA+
Sbjct: 384 NKAIELNPNISEAYNNRGNAKNNLKQYEEAI 414
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+++++ KAI LDS +Y NR ++L ++ I+D +KA++L+P + +AY
Sbjct: 345 AIKDFDKAIE-LDSNYLSAYN-----NRGISKAKLGNNEEAIKDFNKAIELNPNISEAYN 398
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G A + L + EEA+ ++K E
Sbjct: 399 NRGNAKNNLKQYEEAIKDYDKAIE 422
>gi|20091650|ref|NP_617725.1| hypothetical protein MA2826 [Methanosarcina acetivorans C2A]
gi|19916818|gb|AAM06205.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 1121
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 10/254 (3%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A +N G+Y AI+ F+ +L+ +P EAL GR A A E A+ D+ +Q +PS
Sbjct: 753 ALINLGRYEEAIACFNPLLELEPENIEALDGRALALARSERREEALEDYNRILQLDPSNT 812
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+A + LG EA + L P + +I++ +G DF AA+
Sbjct: 813 KALAEKASLFEELGRYEEAASTYGEILLITPENREIMYRQGKALEAKGDFEAAIACYDQI 872
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN--- 566
+ LD +N A G A + + Y++A ++ KAI+ N AW +++ AN
Sbjct: 873 LTLDPKNIDAINNKGFAYAKMERYQEAIASYDKAIEYAPNNAAAW-----YFKGCANFAI 927
Query: 567 --SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ A+EC +V+ + A++ +G L + +G+ ++I L I+P+ LY
Sbjct: 928 SSNIAAVECFDKVVQLKPDCITAWYNKGYLYNVMGEVNESINSYDGALAINPNEPSILYN 987
Query: 625 RASCYHAIGEYREA 638
+ ++ I EY +A
Sbjct: 988 KRFAHYRIKEYEDA 1001
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 115/253 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A + +Y AI +D+ L+ P + +G + AIS + +++ ++
Sbjct: 103 KGCALTSLERYEEAIDCYDRALESFPASSWSWYQKGNGYLQTQNYVEAISCYEKSLATDS 162
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
W ++ A LG EA+ +++ N + L +G ++++ A++
Sbjct: 163 YLSRVWFQKALASEKLGLEQEALASYDSSIDLGSNVSKTLQMQGKAYTGLENYDEAMKCF 222
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ +T G+ G+Y+ A + + +AI L+ + EAW + + +
Sbjct: 223 DGALNITPDDSELWTQKGIMYDMSGDYEAAIQCYDEAISLNPDLTEAWYNKGVDLEGMEM 282
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ AL C + VL + A +G L LG++++A++ L +P N + Y +
Sbjct: 283 YQDALTCYEFVLLSEPENLSALQKKGFCLEQLGRNEEALQCYEEILIYNPDNADAWYSKG 342
Query: 627 SCYHAIGEYREAV 639
S +A+G+Y A+
Sbjct: 343 SVLNAMGDYDAAI 355
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 114/286 (39%), Gaps = 33/286 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI G Y +AI +D+ + +P EA +G + A++ + + S P
Sbjct: 239 KGIMYDMSGDYEAAIQCYDEAISLNPDLTEAWYNKGVDLEGMEMYQDALTCYEFVLLSEP 298
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A +++G LG + EA+Q + L + P++AD + +G V D++AA+
Sbjct: 299 ENLSALQKKGFCLEQLGRNEEALQCYEEILIYNPDNADAWYSKGSVLNAMGDYDAAIACY 358
Query: 507 SACVKLD-----------------------------KENKSAYTYL----GLALSSIGEY 533
+ D E KS+ + GLA + Y
Sbjct: 359 DRALNPDAGIEVEEVGDALLEEFNAYDSSLPIYSEVPEFKSSAVKIWYDKGLAFDKLENY 418
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ A E + ++ + W Q L E+A +C + L +D ++K +H +G
Sbjct: 419 ESALECYDSVLETESGHAMVWYRKGQDLDRLNRYEEAADCYDKALKLDSGYAKVWHRKGY 478
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LGQ+K A K + +D + Y +A G+Y EA+
Sbjct: 479 DSSKLGQYKDAAKSFDKAVNLDENYTLAWYGKAFALSKTGDYEEAL 524
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 103/243 (42%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ +D L +P+ EA +G+A E A+ + +A+ +P + AW
Sbjct: 658 YEDALYAYDTALSINPLRTEAWYEKGSALDKLGRSEEALECYKKALDLDPQSSNAWYGMA 717
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
LG S EA+ + L + + L + + A+ + ++L+ EN
Sbjct: 718 STSNTLGRSEEAVAYYDQLLAANASDPEALQGKSEALINLGRYEEAIACFNPLLELEPEN 777
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A LAL+ ++A E + + +QLD + +A +++L E+A +
Sbjct: 778 IEALDGRALALARSERREEALEDYNRILQLDPSNTKALAEKASLFEELGRYEEAASTYGE 837
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+L I + + +G L G + AI L +DP NI+ + + Y + Y+
Sbjct: 838 ILLITPENREIMYRQGKALEAKGDFEAAIACYDQILTLDPKNIDAINNKGFAYAKMERYQ 897
Query: 637 EAV 639
EA+
Sbjct: 898 EAI 900
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A +G + +AI+ +DQIL DP +A+ +G A A + AI+ + +AI+ P
Sbjct: 852 QGKALEAKGDFEAAIACYDQILTLDPKNIDAINNKGFAYAKMERYQEAIASYDKAIEYAP 911
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ AW +G A A+ ++ A++ K ++ +P+ + +G + + N ++
Sbjct: 912 NNAAAWYFKGCANFAISSNIAAVECFDKVVQLKPDCITAWYNKGYLYNVMGEVNESINSY 971
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ ++ S A I EY+ A K +D F+ A
Sbjct: 972 DGALAINPNEPSILYNKRFAHYRIKEYEDASACKTKLDAIDPGFVAA 1018
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 109/242 (45%)
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
A+ +++L + P+ E L+ +G +E E +I F +A++ + ++ AW +G
Sbjct: 46 ATVPPSLEEVLAQRPVSVEGLLNKGNNLYSLKEYELSIECFDDALEMDSNSSMAWYGKGC 105
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
A +L EAI +ALE P S+ +++G + +++ A+ + D
Sbjct: 106 ALTSLERYEEAIDCYDRALESFPASSWSWYQKGNGYLQTQNYVEAISCYEKSLATDSYLS 165
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
+ LA +G ++A ++ +I L N + + Y L N ++A++C
Sbjct: 166 RVWFQKALASEKLGLEQEALASYDSSIDLGSNVSKTLQMQGKAYTGLENYDEAMKCFDGA 225
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
L I S+ + +G++ G ++ AI+ + ++P E Y + + Y++
Sbjct: 226 LNITPDDSELWTQKGIMYDMSGDYEAAIQCYDEAISLNPDLTEAWYNKGVDLEGMEMYQD 285
Query: 638 AV 639
A+
Sbjct: 286 AL 287
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/360 (18%), Positives = 153/360 (42%), Gaps = 21/360 (5%)
Query: 295 ERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES----RSKLSF 350
+ G+ G + + + +LN + +SE +++ I + S D + +S
Sbjct: 203 QMQGKAYTGLENYDEAMKCFDGALNITPDDSELWTQKGIMYDMSGDYEAAIQCYDEAISL 262
Query: 351 KWDMLKETSN--------EAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAIS 402
D+ + N E ++ C + S+ ++ +G G+ A+
Sbjct: 263 NPDLTEAWYNKGVDLEGMEMYQDALTCYEFVLLSEPENLSALQKKGFCLEQLGRNEEALQ 322
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+++IL +P +A +G+ + +AAI+ + A+ NP AG + G A L
Sbjct: 323 CYEEILIYNPDNADAWYSKGSVLNAMGDYDAAIACYDRAL--NPDAGIEVEEVGDA---L 377
Query: 463 GESVEA----IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
E A + S+ EF+ ++ I +++G+ K +++ +A+E + ++ + +
Sbjct: 378 LEEFNAYDSSLPIYSEVPEFKSSAVKIWYDKGLAFDKLENYESALECYDSVLETESGHAM 437
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
+ G L + Y++A + + KA++LD + + W L + A + + +
Sbjct: 438 VWYRKGQDLDRLNRYEEAADCYDKALKLDSGYAKVWHRKGYDSSKLGQYKDAAKSFDKAV 497
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+D+ ++ A++ + L G +++A+ L P + E Y + + Y+EA
Sbjct: 498 NLDENYTLAWYGKAFALSKTGDYEEALACYEKVLAAAPDSAEIWYNKGLLLDQLERYQEA 557
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 81/217 (37%), Gaps = 34/217 (15%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+ + + KS +V +G+A Y SA+ +D +L+ + G A
Sbjct: 392 SEVPEFKSSAVKIWYDKGLAFDKLENYESALECYDSVLETE---------SGHAM----- 437
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
W R+GQ L EA KAL+ + A + H +G
Sbjct: 438 --------------------VWYRKGQDLDRLNRYEEAADCYDKALKLDSGYAKVWHRKG 477
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K + A + V LD+ A+ ALS G+Y++A + K + +
Sbjct: 478 YDSSKLGQYKDAAKSFDKAVNLDENYTLAWYGKAFALSKTGDYEEALACYEKVLAAAPDS 537
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
E W + L ++A +C Q L I+ +S A
Sbjct: 538 AEIWYNKGLLLDQLERYQEASDCYSQALQINPGYSIA 574
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE-IQD 71
L ++ + + D+L+ ++ A+ + E L +L + +AI + LL E I+
Sbjct: 723 LGRSEEAVAYYDQLLAANASDPEALQGKSE--ALINLGRYEEAIACFNPLLELEPENIEA 780
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
+ RA ++ E + + D ++ LQLDP+ +A K F LGR EEA S +
Sbjct: 781 LDGRALALARSERREEALEDYNRILQLDPSNTKALAEKASLFEELGRYEEAASTY 835
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 55 AIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAF 113
AI D +L I I N+ F Y+++E ++ I DKA++ P A+ KGCA
Sbjct: 865 AIACYDQILTLDPKNIDAINNKGFAYAKMERYQEAIASYDKAIEYAPNNAAAWYFKGCAN 924
Query: 114 SALGRKEEALSVWEK 128
A+ A+ ++K
Sbjct: 925 FAISSNIAAVECFDK 939
>gi|145480427|ref|XP_001426236.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393310|emb|CAK58838.1| unnamed protein product [Paramecium tetraurelia]
Length = 821
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 123/256 (48%), Gaps = 22/256 (8%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ +F +RG+ + G SA+ +++ ++ DPM P+ RG E A+ D+
Sbjct: 217 NAEFYYNRGVLNHDMGNVESALLDYNKAIELDPMDPKFHFHRGIQNNEMGNKEQALLDYN 276
Query: 440 EAIQSNPSAGEAWKRRG--------QARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ I +P+ + RG + +G +A+ D +KA++ +P+S+ + RG+
Sbjct: 277 QVILLDPTHSRTYCNRGFLNLYKIGIVQKNIGNKDQAVVDFNKAIQLDPSSSMFYYNRGV 336
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---- 547
+ ++ K+++ A+ D ++LD + Y G+ IG ++A + +AI LD
Sbjct: 337 IYYEMKNYDQALLDYDKAIELDATDPKIYYNRGILYQDIGNIQQALLNYTQAIHLDPMNP 396
Query: 548 -------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
N + G+L Y ++ N + AL +V+ ++ KAY RG+L +G
Sbjct: 397 KYYYNRGNNNIYGLGNL---YGEMGNKDLALLDYDKVIQLNPNDEKAYCNRGILHKDMGN 453
Query: 601 HKKAIKDLSSGLGIDP 616
+KA+ D + L ++P
Sbjct: 454 QEKALLDYNQALILNP 469
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%), Gaps = 16/271 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF--------QRELEAAISD 437
+RGI + G A+ + Q + DPM P+ RG + + A+ D
Sbjct: 367 NRGILYQDIGNIQQALLNYTQAIHLDPMNPKYYYNRGNNNIYGLGNLYGEMGNKDLALLD 426
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK-- 495
+ + IQ NP+ +A+ RG +G +A+ D ++AL P A RGI+ F
Sbjct: 427 YDKVIQLNPNDEKAYCNRGILHKDMGNQEKALLDYNQALILNPMEAITYINRGILRFIKG 486
Query: 496 -FKDFNAAVE----DLSACVKLDKENKSAYT-YLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+F E D + ++LD N AY +GL +G+ + A + AI LD
Sbjct: 487 ILNNFMGNKEKSLIDYNKSIELDPLNSFAYINRVGLLYDELGKKEFALVDYNNAIFLDSK 546
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + Y+ L N E+AL L + +D +++ AY RG + +G + A+ D S
Sbjct: 547 NSKFYYKRGVLYESLGNKEQALLDLSISIQLDSKYALAYMSRGSIYFEIGNKQFALDDYS 606
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ +DP Y R YH +G +A++
Sbjct: 607 LAIQLDPLKAINYYNRGVLYHELGNNEQAIL 637
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 14/230 (6%)
Query: 423 TARAFQRE--LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+A FQR+ + + D +AIQ NP+ G A+ R G + G+ EA++ +KA+E +
Sbjct: 122 SATVFQRKKMFQESQEDCEKAIQINPNYGLAYMRIGNLKHEQGQVYEALKYYNKAIEVDE 181
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+RG + + A++D + +++D +N Y G+ +G + A +
Sbjct: 182 KCCYAYIKRGEICIQIGQKQQALKDYTTVIQIDPKNAEFYYNRGVLNHDMGNVESALLDY 241
Query: 541 LKAIQLDRNFLEAWGHLTQFYQD--LANSEKALECLQQVLYIDKRFSKAYHLRGLL-LHG 597
KAI+LD ++ H + Q+ + N E+AL QV+ +D S+ Y RG L L+
Sbjct: 242 NKAIELDP--MDPKFHFHRGIQNNEMGNKEQALLDYNQVILLDPTHSRTYCNRGFLNLYK 299
Query: 598 LGQHKK-------AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+G +K A+ D + + +DPS+ Y R Y+ + Y +A++
Sbjct: 300 IGIVQKNIGNKDQAVVDFNKAIQLDPSSSMFYYNRGVIYYEMKNYDQALL 349
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 8/242 (3%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+ A+ +++ ++ D A I RG + + A+ D+T IQ +P E +
Sbjct: 163 QGQVYEALKYYNKAIEVDEKCCYAYIKRGEICIQIGQKQQALKDYTTVIQIDPKNAEFYY 222
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG +G A+ D +KA+E +P RGI N + + A+ D + + LD
Sbjct: 223 NRGVLNHDMGNVESALLDYNKAIELDPMDPKFHFHRGIQNNEMGNKEQALLDYNQVILLD 282
Query: 514 KENKSAY--------TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ Y +G+ +IG +A KAIQLD + + + Y ++
Sbjct: 283 PTHSRTYCNRGFLNLYKIGIVQKNIGNKDQAVVDFNKAIQLDPSSSMFYYNRGVIYYEMK 342
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N ++AL + + +D K Y+ RG+L +G ++A+ + + + +DP N + Y R
Sbjct: 343 NYDQALLDYDKAIELDATDPKIYYNRGILYQDIGNIQQALLNYTQAIHLDPMNPKYYYNR 402
Query: 626 AS 627
+
Sbjct: 403 GN 404
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 119/239 (49%), Gaps = 10/239 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P Y A + G + Q ++ A+ + +AI+ + A+ +RG+ +G+ +A++
Sbjct: 146 NPNYGLAYMRIGNLKHEQGQVYEALKYYNKAIEVDEKCCYAYIKRGEICIQIGQKQQALK 205
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D + ++ +P +A+ + RG++N + +A+ D + ++LD + + + G+ + +
Sbjct: 206 DYTTVIQIDPKNAEFYYNRGVLNHDMGNVESALLDYNKAIELDPMDPKFHFHRGIQNNEM 265
Query: 531 GEYKKAEEAHLKAIQLD---------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G ++A + + I LD R FL + + +++ N ++A+ + + +D
Sbjct: 266 GNKEQALLDYNQVILLDPTHSRTYCNRGFLNLY-KIGIVQKNIGNKDQAVVDFNKAIQLD 324
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
S Y+ RG++ + + + +A+ D + +D ++ + Y R Y IG ++A++
Sbjct: 325 PSSSMFYYNRGVIYYEMKNYDQALLDYDKAIELDATDPKIYYNRGILYQDIGNIQQALL 383
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 110/243 (45%), Gaps = 12/243 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-------FQRELEAAISDF 438
+RGI + G A+ ++Q L +PM I RG R F E ++ D+
Sbjct: 443 NRGILHKDMGNQEKALLDYNQALILNPMEAITYINRGILRFIKGILNNFMGNKEKSLIDY 502
Query: 439 TEAIQSNPSAGEAW-KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
++I+ +P A+ R G LG+ A+ D + A+ + ++ ++RG++
Sbjct: 503 NKSIELDPLNSFAYINRVGLLYDELGKKEFALVDYNNAIFLDSKNSKFYYKRGVLYESLG 562
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ DLS ++LD + AY G IG + A + + AIQLD L+A +
Sbjct: 563 NKEQALLDLSISIQLDSKYALAYMSRGSIYFEIGNKQFALDDYSLAIQLDP--LKAINYY 620
Query: 558 TQ--FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ Y +L N+E+A+ + +D ++Y RG++ GQ+ + D +
Sbjct: 621 NRGVLYHELGNNEQAILDFSMAIKLDPNDVRSYCNRGVIYINRGQYNFGLSDYLRANHLQ 680
Query: 616 PSN 618
P N
Sbjct: 681 PDN 683
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 39/215 (18%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRG------QARAALGESV--EAIQDLSKALEFEPNSADIL 486
I+DF PS +A RG Q L E++ +A+ DL++A+E + L
Sbjct: 55 INDFLHLF---PSNSQALTIRGSFNFLTQGELFLKENLNDQALNDLNQAIELGSLNEVTL 111
Query: 487 HERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG IV K SA V K+ +++++E KAIQ
Sbjct: 112 YNRGKIVLIK-----------SATVFQRKK----------------MFQESQEDCEKAIQ 144
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ N+ A+ + + +AL+ + + +D++ AY RG + +GQ ++A+
Sbjct: 145 INPNYGLAYMRIGNLKHEQGQVYEALKYYNKAIEVDEKCCYAYIKRGEICIQIGQKQQAL 204
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
KD ++ + IDP N E Y R H +G A++
Sbjct: 205 KDYTTVIQIDPKNAEFYYNRGVLNHDMGNVESALL 239
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ D + +IQ + A+ RG +G A+ D S A++ +P A + RG+
Sbjct: 565 EQALLDLSISIQLDSKYALAYMSRGSIYFEIGNKQFALDDYSLAIQLDPLKAINYYNRGV 624
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA--IQLDRN 549
+ + + A+ D S +KLD + +Y G+ + G+Y +L+A +Q D
Sbjct: 625 LYHELGNNEQAILDFSMAIKLDPNDVRSYCNRGVIYINRGQYNFGLSDYLRANHLQPDNP 684
Query: 550 FL-EAWGHLTQFYQDLANS 567
F+ + L Q+ NS
Sbjct: 685 FISQVLEQLYSLQQNQPNS 703
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F RG+ + G A+ ++ D Y A + RG+ + A+ D++ AI
Sbjct: 550 FYYKRGVLYESLGNKEQALLDLSISIQLDSKYALAYMSRGSIYFEIGNKQFALDDYSLAI 609
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q +P + RG LG + +AI D S A++ +PN RG++ +N
Sbjct: 610 QLDPLKAINYYNRGVLYHELGNNEQAILDFSMAIKLDPNDVRSYCNRGVIYINRGQYNFG 669
Query: 503 VEDLSACVKLDKEN 516
+ D L +N
Sbjct: 670 LSDYLRANHLQPDN 683
>gi|218438120|ref|YP_002376449.1| hypothetical protein PCC7424_1130 [Cyanothece sp. PCC 7424]
gi|218170848|gb|ACK69581.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 271
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 30/222 (13%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
+ +G + + + AI+DFT+AIQ P+ +A+ R LG AI D +KA+E
Sbjct: 41 IYNKGVDKLSAGDYQGAIADFTQAIQLAPNDADAYYNRAYGYLILGNFEGAIADYTKAVE 100
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
PN R V F K++ AAV+D + + + Y Y G A S + + ++A
Sbjct: 101 INPNYTYAYGNRCYVYFLSKNYEAAVKDCTTAISQETNYADFYIYRGNAKSGLNQDQEAL 160
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ KAI+L AN+ K L +KAY+ RGL+ +G
Sbjct: 161 ADYNKAIEL-----------------AANNPKTL-------------AKAYYNRGLVHNG 190
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L H++AI D S + ++P + + Y R Y+ +G +EA+
Sbjct: 191 LENHQQAIADYSESIRLNPDDGDAYYNRGVTYYGLGNNQEAI 232
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +R + G + AI+ + + ++ +P Y A R + EAA+ D T A
Sbjct: 73 DAYYNRAYGYLILGNFEGAIADYTKAVEINPNYTYAYGNRCYVYFLSKNYEAAVKDCTTA 132
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL----HERGIVNFKFK 497
I + + + RG A++ L + EA+ D +KA+E N+ L + RG+V+ +
Sbjct: 133 ISQETNYADFYIYRGNAKSGLNQDQEALADYNKAIELAANNPKTLAKAYYNRGLVHNGLE 192
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ A+ D S ++L+ ++ AY G+ +G ++A
Sbjct: 193 NHQQAIADYSESIRLNPDDGDAYYNRGVTYYGLGNNQEA 231
>gi|254414341|ref|ZP_05028108.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196179016|gb|EDX74013.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 717
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 106/238 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + +Y A++ ++ K P YPEA RG A LE AI+ + +A+Q
Sbjct: 250 NRGLVLFHLTRYTEAVTSCEKATKLQPNYPEAWFHRGNALFSLGRLEDAIASYDQALQLK 309
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W RG A +LG EA+ A F P+ A+ + +G+ + + NAA+
Sbjct: 310 PDDYATWGNRGSALYSLGRYREAVSSCQNATYFNPDYAEAWYMQGLALMQGEQPNAAIAC 369
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L L + A+ Y G L +G A + +A L +++EAW L
Sbjct: 370 LDKATALKPDYAQAWLYRGHLLFQLGHLADAIASCQQATTLQPDYVEAWSIQGIALMQLQ 429
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+A+ CL +V+ + +A+ RG +L L + + AI + + P + Y
Sbjct: 430 RPHEAIACLDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQAWY 487
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 121/240 (50%), Gaps = 5/240 (2%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDP-MYPEALIGRGTA 424
++ ++ ++ D+ ++G+ ++ + +AI+ FD L+ P +YP A + RG
Sbjct: 468 AISSFDRAITLKPDYFQAWYNKGLLLMHLDRPDAAITTFDNALELQPKLYP-AWVNRGNL 526
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ +AAI+ + +A+ P+ EAW RG A LG +A+ +AL + + A
Sbjct: 527 LLQEGRWDAAIASYDQALAIQPNVAEAWANRGIALEKLGRYQDALDSYDQALVLQSDDAK 586
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ G+ + + A+ S + ++ + GLAL ++G Y++A +AI
Sbjct: 587 TWNHHGVTLIQLGRYQDALISFSNALDHQPDDPETWNNRGLALDNLGRYEEAMVCFEQAI 646
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L+ ++ +AW + ++L E+A+ Q L ++ + +A++ RGL L LG+ ++A
Sbjct: 647 ELNSDYAQAWNNRGVALRNLGREEEAILSFDQALELNPDYPEAWNNRGLALRHLGREEEA 706
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 115/270 (42%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ R+ + + RG + AIS FD+ + P Y +A +G
Sbjct: 437 CLDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQAWYNKGLLLMHL 496
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+AAI+ F A++ P AW RG G AI +AL +PN A+
Sbjct: 497 DRPDAAITTFDNALELQPKLYPAWVNRGNLLLQEGRWDAAIASYDQALAIQPNVAEAWAN 556
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RGI K + A++ + L ++ + + G+ L +G Y+ A + A+
Sbjct: 557 RGIALEKLGRYQDALDSYDQALVLQSDDAKTWNHHGVTLIQLGRYQDALISFSNALDHQP 616
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ E W + +L E+A+ C +Q + ++ +++A++ RG+ L LG+ ++AI
Sbjct: 617 DDPETWNNRGLALDNLGRYEEAMVCFEQAIELNSDYAQAWNNRGVALRNLGREEEAILSF 676
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREA 638
L ++P E R +G EA
Sbjct: 677 DQALELNPDYPEAWNNRGLALRHLGREEEA 706
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 108/253 (42%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ +N G+ A++ FDQ + Y EA +G A+ + +A+ P
Sbjct: 149 QGLVLMNGGRKEEALTSFDQATSLNHDYLEAWKHKGWILFNLNRYTEALDSWQQAVSLQP 208
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ E W ++G L +A+ KA+ +P++ + + RG+V F + AV
Sbjct: 209 NDYEVWFQQGNTCYRLERLDDALASYEKAITLQPDAPEAWNNRGLVLFHLTRYTEAVTSC 268
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
KL A+ + G AL S+G + A ++ +A+QL + WG+ L
Sbjct: 269 EKATKLQPNYPEAWFHRGNALFSLGRLEDAIASYDQALQLKPDDYATWGNRGSALYSLGR 328
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+ Q Y + +++A++++GL L Q AI L + P + R
Sbjct: 329 YREAVSSCQNATYFNPDYAEAWYMQGLALMQGEQPNAAIACLDKATALKPDYAQAWLYRG 388
Query: 627 SCYHAIGEYREAV 639
+G +A+
Sbjct: 389 HLLFQLGHLADAI 401
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 101/241 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R N G+Y A++ Q P Y +A +G E A++ F +A N
Sbjct: 114 NRASTLYNLGQYEEALASCQQATHCQPDYVQAWYMQGLVLMNGGRKEEALTSFDQATSLN 173
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EAWK +G L EA+ +A+ +PN ++ ++G ++ + + A+
Sbjct: 174 HDYLEAWKHKGWILFNLNRYTEALDSWQQAVSLQPNDYEVWFQQGNTCYRLERLDDALAS 233
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + A+ GL L + Y +A + KA +L N+ EAW H L
Sbjct: 234 YEKAITLQPDAPEAWNNRGLVLFHLTRYTEAVTSCEKATKLQPNYPEAWFHRGNALFSLG 293
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E A+ Q L + + RG L+ LG++++A+ + +P E Y++
Sbjct: 294 RLEDAIASYDQALQLKPDDYATWGNRGSALYSLGRYREAVSSCQNATYFNPDYAEAWYMQ 353
Query: 626 A 626
Sbjct: 354 G 354
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G+Y A+S +P Y EA +G A + AAI+ +A
Sbjct: 318 NRGSALYSLGRYREAVSSCQNATYFNPDYAEAWYMQGLALMQGEQPNAAIACLDKATALK 377
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG LG +AI +A +P+ + +GI + + + A+
Sbjct: 378 PDYAQAWLYRGHLLFQLGHLADAIASCQQATTLQPDYVEAWSIQGIALMQLQRPHEAIAC 437
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L V+L E+ A+ + G L + + A + +AI L ++ +AW + L
Sbjct: 438 LDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQAWYNKGLLLMHLD 497
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A+ L + + A+ RG LL G+ AI L I P+ E R
Sbjct: 498 RPDAAITTFDNALELQPKLYPAWVNRGNLLLQEGRWDAAIASYDQALAIQPNVAEAWANR 557
Query: 626 ASCYHAIGEYREAV 639
+G Y++A+
Sbjct: 558 GIALEKLGRYQDAL 571
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 112/272 (41%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ + + K L RG G A AI+ Q P Y EA +G A
Sbjct: 369 CLDKATALKPDYAQAWLYRGHLLFQLGHLADAIASCQQATTLQPDYVEAWSIQGIALMQL 428
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ AI+ ++ P EAWK RG L +AI +A+ +P+ +
Sbjct: 429 QRPHEAIACLDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQAWYN 488
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G++ +AA+ ++L + A+ G L G + A ++ +A+ +
Sbjct: 489 KGLLLMHLDRPDAAITTFDNALELQPKLYPAWVNRGNLLLQEGRWDAAIASYDQALAIQP 548
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N EAW + + L + AL+ Q L + +K ++ G+ L LG+++ A+
Sbjct: 549 NVAEAWANRGIALEKLGRYQDALDSYDQALVLQSDDAKTWNHHGVTLIQLGRYQDALISF 608
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
S+ L P + E R +G Y EA++
Sbjct: 609 SNALDHQPDDPETWNNRGLALDNLGRYEEAMV 640
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +GI G+Y AI+ F++ + P PE G +AA++++ +AI
Sbjct: 11 LQQGIEYFQIGRYGEAIASFEKAAQFHPNMPEIWFHWGNTCFHLGWFDAALTNYEKAITL 70
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW +G LG +A+ +A +F P+ A R + + A+
Sbjct: 71 KPDYSEAWFNQGNILFKLGRLEDALASYDQATQFNPDLAVAWGNRASTLYNLGQYEEALA 130
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ A+ GL L + G ++A + +A L+ ++LEAW H +L
Sbjct: 131 SCQQATHCQPDYVQAWYMQGLVLMNGGRKEEALTSFDQATSLNHDYLEAWKHKGWILFNL 190
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+AL+ QQ + + + + +G + L + A+ + + P E
Sbjct: 191 NRYTEALDSWQQAVSLQPNDYEVWFQQGNTCYRLERLDDALASYEKAITLQPDAPEAWNN 250
Query: 625 RASCYHAIGEYREAV 639
R + Y EAV
Sbjct: 251 RGLVLFHLTRYTEAV 265
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 106/245 (43%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + +A++ +++ + P Y EA +G LE A++ + +A Q NP AW
Sbjct: 55 GWFDAALTNYEKAITLKPDYSEAWFNQGNILFKLGRLEDALASYDQATQFNPDLAVAWGN 114
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R LG+ EA+ +A +P+ + +G+V A+ L+
Sbjct: 115 RASTLYNLGQYEEALASCQQATHCQPDYVQAWYMQGLVLMNGGRKEEALTSFDQATSLNH 174
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ + G L ++ Y +A ++ +A+ L N E W L + AL
Sbjct: 175 DYLEAWKHKGWILFNLNRYTEALDSWQQAVSLQPNDYEVWFQQGNTCYRLERLDDALASY 234
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ + + +A++ RGL+L L ++ +A+ + P+ E + R + ++G
Sbjct: 235 EKAITLQPDAPEAWNNRGLVLFHLTRYTEAVTSCEKATKLQPNYPEAWFHRGNALFSLGR 294
Query: 635 YREAV 639
+A+
Sbjct: 295 LEDAI 299
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W ++G +G EAI KA +F PN +I G F F+AA+ + +
Sbjct: 10 WLQQGIEYFQIGRYGEAIASFEKAAQFHPNMPEIWFHWGNTCFHLGWFDAALTNYEKAIT 69
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L + A+ G L +G + A ++ +A Q + + AWG+ +L E+AL
Sbjct: 70 LKPDYSEAWFNQGNILFKLGRLEDALASYDQATQFNPDLAVAWGNRASTLYNLGQYEEAL 129
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
QQ + + +A++++GL+L G+ ++A+ ++ +E +
Sbjct: 130 ASCQQATHCQPDYVQAWYMQGLVLMNGGRKEEALTSFDQATSLNHDYLEAWKHKGWILFN 189
Query: 632 IGEYREAV 639
+ Y EA+
Sbjct: 190 LNRYTEAL 197
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%), Gaps = 13/213 (6%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDF-------------RLSRGIAQVNEGKYASAI 401
LK +A NK + + + + F ++RG + EG++ +AI
Sbjct: 478 LKPDYFQAWYNKGLLLMHLDRPDAAITTFDNALELQPKLYPAWVNRGNLLLQEGRWDAAI 537
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+ +DQ L P EA RG A + A+ + +A+ + W G
Sbjct: 538 ASYDQALAIQPNVAEAWANRGIALEKLGRYQDALDSYDQALVLQSDDAKTWNHHGVTLIQ 597
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG +A+ S AL+ +P+ + + RG+ + A+ ++L+ + A+
Sbjct: 598 LGRYQDALISFSNALDHQPDDPETWNNRGLALDNLGRYEEAMVCFEQAIELNSDYAQAWN 657
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
G+AL ++G ++A + +A++L+ ++ EAW
Sbjct: 658 NRGVALRNLGREEEAILSFDQALELNPDYPEAW 690
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RG+A N G+ AI FDQ L+ +P YPEA RG A R RE EA S F +A
Sbjct: 658 NRGVALRNLGREEEAILSFDQALELNPDYPEAWNNRGLALRHLGREEEANAS-FEQANMK 716
Query: 445 N 445
N
Sbjct: 717 N 717
>gi|402771088|ref|YP_006590625.1| hypothetical protein BN69_0523 [Methylocystis sp. SC2]
gi|401773108|emb|CCJ05974.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
sp. SC2]
Length = 291
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G++ A++ F Q +K +P A R A + +AA +DF AI+ N
Sbjct: 83 TRGVAYARVGRFQEAVADFTQAIKLEPNNSAAYTNRALALRQMGQSDAARADFDRAIEVN 142
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R A G +A+ DL +A+ P SA H RG+++ K D AV D
Sbjct: 143 PKHAPAYVGRANLLRAQGNLDQALADLDQAIRLNPESAQAFHARGLIHQKRGDDARAVTD 202
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ D + Y G +L ++G+Y KA E A+ +D AW L Y
Sbjct: 203 FDNAIDRDPFAAAPYLARGESLVTLGKYDKAVEDFNAALNVDSKSALAWAWLGVAYDKSG 262
Query: 566 NSEKALECLQQVLYIDKR 583
N KA E Q+ L +D +
Sbjct: 263 NRSKARESFQRALTLDPQ 280
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 37/223 (16%)
Query: 420 GRGTARAFQRELEAA---ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
GRG A + +A I+ TE I+ NPS+ EA+ RG A A +G EA+ D ++A+
Sbjct: 46 GRGIAEIADTDPNSASVNINSLTEVIRRNPSSAEAYDTRGVAYARVGRFQEAVADFTQAI 105
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ EPN N +AYT LAL +G+ A
Sbjct: 106 KLEPN----------------------------------NSAAYTNRALALRQMGQSDAA 131
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+AI+++ A+ + N ++AL L Q + ++ ++A+H RGL+
Sbjct: 132 RADFDRAIEVNPKHAPAYVGRANLLRAQGNLDQALADLDQAIRLNPESAQAFHARGLIHQ 191
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G +A+ D + + DP R +G+Y +AV
Sbjct: 192 KRGDDARAVTDFDNAIDRDPFAAAPYLARGESLVTLGKYDKAV 234
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 53/209 (25%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN----------------EGKYA 398
L+ ++ A N+ + ++ +S + DF R I +VN +G
Sbjct: 107 LEPNNSAAYTNRALALRQMGQSDAARADF--DRAI-EVNPKHAPAYVGRANLLRAQGNLD 163
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
A++ DQ ++ +P +A RG + + A++DF AI +P A + RG++
Sbjct: 164 QALADLDQAIRLNPESAQAFHARGLIHQKRGDDARAVTDFDNAIDRDPFAAAPYLARGES 223
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
LG+ +A++ DFNAA + +D ++
Sbjct: 224 LVTLGKYDKAVE---------------------------DFNAA-------LNVDSKSAL 249
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
A+ +LG+A G KA E+ +A+ LD
Sbjct: 250 AWAWLGVAYDKSGNRSKARESFQRALTLD 278
>gi|119487585|ref|ZP_01621195.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119455754|gb|EAW36890.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 1107
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 142/310 (45%), Gaps = 28/310 (9%)
Query: 332 SISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQ 391
S +D+ ++ E+ + L K++ LK ++AK FCV
Sbjct: 271 SQTDDIFVENAENITPLETKYNELKAYQSQAK----FCV--------------------- 305
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
++G++ AI+I Q LK P + A + G A FQ +LEAAI +++ ++ P+ E
Sbjct: 306 -DQGQFEQAITICQQALKIQPKFYHAYVILGNALHFQGKLEAAIRAYSQVLKLQPNFAEI 364
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ RG A L + +AI D +ALE +PN A + G + + F +++ ++
Sbjct: 365 YGNRGTMYAKLNQIDKAIADYQQALELQPNFAVVHWNLGKIFQRLGRFEESIKSWKTALE 424
Query: 512 LDKENKSA--YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ A + LG L+ ++K A ++ KA+++ + +EA +L Y + E
Sbjct: 425 IQPNLNGAKLHIELGNLLTGQKQFKAAISSYQKALEIQPSEVEAHLNLGCLYSEQKQYET 484
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
A++ Q + I+ + Y G L L H++AI + L I P N E + Y
Sbjct: 485 AIKTFQAGIQINPKNLDLYLNMGFALVKLNHHQEAINCYQNLLNIQPDNKEAYASLGNIY 544
Query: 630 HAIGEYREAV 639
G+ ++A+
Sbjct: 545 ANAGQVKQAI 554
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 93/231 (40%), Gaps = 17/231 (7%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ GI GK+ SAI+ + Q L+ P E A +LEA I
Sbjct: 5 SVETYFKTGIEFQEAGKWGSAIASYQQALQIAPHQAEIYQKLAEAFVLNGQLEAGIKAIQ 64
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A+ P+ A+ G + AI ++AL+ +P + G + + + F
Sbjct: 65 TAVNLKPNFAVAYLSIGNVLQQQNQIELAIWAYTEALDVKPEFTEAQANLGSMYYHLQRF 124
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---------- 549
+ A++ + D + Y LG A S + +KA + KAI L N
Sbjct: 125 SEAIQCYQKAIYFDSNSAIIYWMLGNAFSQTDQLEKAISCYQKAIDLQPNQVKFYLKLAA 184
Query: 550 FLEAWGHLTQ---FYQDL----ANSEKALECLQQVLYIDKRFSKAYHLRGL 593
L+ G Q +YQ + + +A+ L+Q+ +D + A +L GL
Sbjct: 185 ILDIQGKTIQAISYYQTILRLQPDCSEAIVALRQLTQVDDPNNWANNLTGL 235
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 7/179 (3%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI---LHERGIVNFKFKDFNAAVEDL 506
E + + G G+ AI +AL+ P+ A+I L E ++N + + A ++ +
Sbjct: 7 ETYFKTGIEFQEAGKWGSAIASYQQALQIAPHQAEIYQKLAEAFVLNGQLE---AGIKAI 63
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
V L AY +G L + + A A+ +A+ + F EA +L Y L
Sbjct: 64 QTAVNLKPNFAVAYLSIGNVLQQQNQIELAIWAYTEALDVKPEFTEAQANLGSMYYHLQR 123
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+A++C Q+ +Y D + Y + G Q +KAI + + P+ ++ YL+
Sbjct: 124 FSEAIQCYQKAIYFDSNSAIIYWMLGNAFSQTDQLEKAISCYQKAIDLQPNQVK-FYLK 181
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 6/160 (3%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
I G Q++ +AAIS + +A++ PS EA G + + AI+ ++
Sbjct: 436 IELGNLLTGQKQFKAAISSYQKALEIQPSEVEAHLNLGCLYSEQKQYETAIKTFQAGIQI 495
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
P + D+ G K A+ + + +NK AY LG ++ G+ K+A E
Sbjct: 496 NPKNLDLYLNMGFALVKLNHHQEAINCYQNLLNIQPDNKEAYASLGNIYANAGQVKQAIE 555
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQD------LANSEKALE 572
+ +AI++ ++ E + L + +AN EK++E
Sbjct: 556 NYEQAIKIKPDWAEIYCRLAHIQKQDQPQVAIANLEKSIE 595
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 75/184 (40%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
+AI+ + +A+Q P E +++ +A G+ I+ + A+ +PN A G V
Sbjct: 24 SAIASYQQALQIAPHQAEIYQKLAEAFVLNGQLEAGIKAIQTAVNLKPNFAVAYLSIGNV 83
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ A+ + + + E A LG + + +A + + KAI D N
Sbjct: 84 LQQQNQIELAIWAYTEALDVKPEFTEAQANLGSMYYHLQRFSEAIQCYQKAIYFDSNSAI 143
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ L + EKA+ C Q+ + + K Y +L G+ +AI + L
Sbjct: 144 IYWMLGNAFSQTDQLEKAISCYQKAIDLQPNQVKFYLKLAAILDIQGKTIQAISYYQTIL 203
Query: 613 GIDP 616
+ P
Sbjct: 204 RLQP 207
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
NR Y++L I D +AL+L P + G F LGR EE++ W+ A
Sbjct: 367 NRGTMYAKLNQIDKAIADYQQALELQPNFAVVHWNLGKIFQRLGRFEESIKSWKT----A 422
Query: 134 LHQSADL---KQFLELEELLTAAKQDRSVTCEY 163
L +L K +EL LLT KQ ++ Y
Sbjct: 423 LEIQPNLNGAKLHIELGNLLTGQKQFKAAISSY 455
>gi|340504470|gb|EGR30909.1| tpr repeat protein [Ichthyophthirius multifiliis]
Length = 1212
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 121/233 (51%), Gaps = 4/233 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+A N KY AI F ++++ +P Y EA I +G + ++ E ++ + EA+
Sbjct: 817 FYRGVAFFNIQKYDEAIDSFQKVIEINPDYLEAYIYKGNSFKKLQKYECSLLCYEEALSK 876
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ +G L + E+I + L A+ +++GI + K F A+E
Sbjct: 877 NPEYEIAYFNKGNILIHLQQYQESIFCFEQILSKNIKHAEAHYQKGIALKEQKKFKEAIE 936
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQ 562
++++++ AY G+AL+ I EY+KA + + KAI++++N+ EA+ + + F+
Sbjct: 937 SFEKAIEINEKYYQAYNNQGIALTEIQEYQKAMKCYEKAIKINKNYAEAYNNKGIILFF- 995
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
L A++C Q+ + I+ FS+AY G L+ +++ AI + I+
Sbjct: 996 -LNEFTDAIKCYQKAIKINSEFSEAYSNIGTALNFQEKYQDAIPCFLKAISIN 1047
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 114/229 (49%), Gaps = 10/229 (4%)
Query: 389 IAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
IA N+G +Y +I F+QIL ++ + EA +G A Q++ + AI F +A
Sbjct: 882 IAYFNKGNILIHLQQYQESIFCFEQILSKNIKHAEAHYQKGIALKEQKKFKEAIESFEKA 941
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ N +A+ +G A + E +A++ KA++ N A+ + +GI+ F +F
Sbjct: 942 IEINEKYYQAYNNQGIALTEIQEYQKAMKCYEKAIKINKNYAEAYNNKGIILFFLNEFTD 1001
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++ +K++ E AY+ +G AL+ +Y+ A LKAI ++ + A+ + Y
Sbjct: 1002 AIKCYQKAIKINSEFSEAYSNIGTALNFQEKYQDAIPCFLKAISINNQYSLAYQNTGVSY 1061
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
L+ KA C ++ ID+ +Y+ + + L +K++ S+
Sbjct: 1062 FKLSQFLKAAVCFEKAFQIDQN---SYNSLFFMNYSLNLYKQSYTSTST 1107
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 2/245 (0%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTAR-AFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
Y AI +++ ++ +P Y A +G +FQ+ +EA I F +AI+ NP EA+ R
Sbjct: 183 YKEAIQYYEKAIEINPNYSNAYFNKGNILISFQKNVEAFIQ-FEKAIKINPHFFEAYNNR 241
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + EAI ++ PN + +G V + A+ + C+ L+
Sbjct: 242 GNILFYQKKYQEAIDSYQFCIQINPNFPNAYFNQGNVYKILVQYEKAIFCYNKCITLNPN 301
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ SAY G L+ + +Y+ A KAI L+ F++A+ + ++ + AL L+
Sbjct: 302 DTSAYYKKGKILNLLKKYEDAILYLDKAISLNPYFIKAYKIKAEVLKNQRKYDDALIILE 361
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+V+ +DK+ K +G LL L Q++ +I L I P Y+ + +Y
Sbjct: 362 KVIEVDKQNLKYLIKQGQLLMKLKQYQNSIDCFEKILQIYPLQENIFQYIGKNYYYLEKY 421
Query: 636 REAVI 640
+A+
Sbjct: 422 EKALF 426
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 7/248 (2%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQ--RELEAAISDFTEAIQSNPSAGEAW 452
K+ AI ++ K DP L+ + F R+ E A F +AI + E +
Sbjct: 116 NKFNEAIKFYE---KADPQ--NCLVQKNKGNIFMNLRKYEEANKCFDQAILLDKQDFECY 170
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+G + L EAIQ KA+E PN ++ +G + F+ A +K+
Sbjct: 171 YNKGNSLTKLKMYKEAIQYYEKAIEINPNYSNAYFNKGNILISFQKNVEAFIQFEKAIKI 230
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ AY G L +Y++A +++ IQ++ NF A+ + Y+ L EKA+
Sbjct: 231 NPHFFEAYNNRGNILFYQKKYQEAIDSYQFCIQINPNFPNAYFNQGNVYKILVQYEKAIF 290
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
C + + ++ + AY+ +G +L+ L +++ AI L + ++P I+ ++A
Sbjct: 291 CYNKCITLNPNDTSAYYKKGKILNLLKKYEDAILYLDKAISLNPYFIKAYKIKAEVLKNQ 350
Query: 633 GEYREAVI 640
+Y +A+I
Sbjct: 351 RKYDDALI 358
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G +N KY A FDQ + D E +G + + + AI + +AI+ N
Sbjct: 138 NKGNIFMNLRKYEEANKCFDQAILLDKQDFECYYNKGNSLTKLKMYKEAIQYYEKAIEIN 197
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ +G + ++VEA KA++ P+ + + RG + F K + A++
Sbjct: 198 PNYSNAYFNKGNILISFQKNVEAFIQFEKAIKINPHFFEAYNNRGNILFYQKKYQEAIDS 257
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
C++++ +AY G + +Y+KA + K I L+ N A+ + L
Sbjct: 258 YQFCIQINPNFPNAYFNQGNVYKILVQYEKAIFCYNKCITLNPNDTSAYYKKGKILNLLK 317
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E A+ L + + ++ F KAY ++ +L ++ A+ L + +D N++ L +
Sbjct: 318 KYEDAILYLDKAISLNPYFIKAYKIKAEVLKNQRKYDDALIILEKVIEVDKQNLKYLIKQ 377
Query: 626 ASCYHAIGEYREAV 639
+ +Y+ ++
Sbjct: 378 GQLLMKLKQYQNSI 391
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 105/208 (50%), Gaps = 2/208 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S+ + ++ + Y AIS FDQ LK D EA +G ++ E A F I
Sbjct: 649 VSKALIEIQQ--YEKAISYFDQALKIDQYNIEAQFNKGICLNLIKKFEKASQCFQNIINM 706
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ +A+ +G L + ++++ L+KA+ N + + V + K + A+E
Sbjct: 707 EPNNQKAYLNQGICLKNLFQYQQSLECLNKAILLNENDFQAIFIKAKVLNEIKQYQEAIE 766
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+KLD +N + LG++ ++ ++++A + IQ +++FLEA+ + + ++
Sbjct: 767 YYKRALKLDCKNYEVFYSLGISFYNLEQFQEAINYFDETIQFNQSFLEAYFYRGVAFFNI 826
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRG 592
++A++ Q+V+ I+ + +AY +G
Sbjct: 827 QKYDEAIDSFQKVIEINPDYLEAYIYKG 854
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 132/291 (45%), Gaps = 36/291 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G GK+ AIS +DQ ++ + ++ + +G A + + AI + + I+
Sbjct: 475 LQKGDCYFFLGKFLEAISCYDQAIQINEIFQDPFFNKGNAFYYLQNFSEAIKCYQKVIEI 534
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP +++ G + L + +A + KAL + L +G + + + F A+
Sbjct: 535 NPQDFKSYNNIGNSFQNLKKYKDAAFNYEKALSINKFYIEGLFNKGSLLIEIRSFQEAIN 594
Query: 505 DLSACVKLDKEN-------------------------------KSAY---TYLGL--ALS 528
+++ N +++Y T++ + AL
Sbjct: 595 CYDQILEISNFNVASLYNKGNILFFYLQNYQESIKCYEEIIQKRNSYLLQTFINVSKALI 654
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
I +Y+KA +A+++D+ +EA + + EKA +C Q ++ ++ KAY
Sbjct: 655 EIQQYEKAISYFDQALKIDQYNIEAQFNKGICLNLIKKFEKASQCFQNIINMEPNNQKAY 714
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+G+ L L Q++++++ L+ + ++ ++ + ++++A + I +Y+EA+
Sbjct: 715 LNQGICLKNLFQYQQSLECLNKAILLNENDFQAIFIKAKVLNEIKQYQEAI 765
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 117/287 (40%), Gaps = 32/287 (11%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G ++ K A F++ +K +P + EA RG +Q++ + AI + IQ
Sbjct: 205 FNKGNILISFQKNVEAFIQFEKAIKINPHFFEAYNNRGNILFYQKKYQEAIDSYQFCIQI 264
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ +G L + +AI +K + PN +++G + K + A+
Sbjct: 265 NPNFPNAYFNQGNVYKILVQYEKAIFCYNKCITLNPNDTSAYYKKGKILNLLKKYEDAIL 324
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
L + L+ AY L + +Y A K I++D+ L+ Q L
Sbjct: 325 YLDKAISLNPYFIKAYKIKAEVLKNQRKYDDALIILEKVIEVDKQNLKYLIKQGQLLMKL 384
Query: 565 ANSEKALECLQQVL-----------YIDK------RFSKA---------------YHLRG 592
+ +++C +++L YI K ++ KA + G
Sbjct: 385 KQYQNSIDCFEKILQIYPLQENIFQYIGKNYYYLEKYEKALFYFEKIVDNKDFDIFFFIG 444
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+L L + +KAI+ I+ ++ + CY +G++ EA+
Sbjct: 445 NILKKLEKFEKAIEYYEKAQLINQNDYYIYLQKGDCYFFLGKFLEAI 491
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 114/247 (46%), Gaps = 2/247 (0%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N+ KY A+ I +++++ D + LI +G ++ + +I F + +Q P +
Sbjct: 349 NQRKYDDALIILEKVIEVDKQNLKYLIKQGQLLMKLKQYQNSIDCFEKILQIYPLQENIF 408
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ G+ L + +A+ K ++ DI G + K + F A+E +
Sbjct: 409 QYIGKNYYYLEKYEKALFYFEKIVD--NKDFDIFFFIGNILKKLEKFEKAIEYYEKAQLI 466
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
++ + Y G +G++ +A + +AIQ++ F + + + + L N +A++
Sbjct: 467 NQNDYYIYLQKGDCYFFLGKFLEAISCYDQAIQINEIFQDPFFNKGNAFYYLQNFSEAIK 526
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
C Q+V+ I+ + K+Y+ G L ++K A + L I+ IE L+ + S I
Sbjct: 527 CYQKVIEINPQDFKSYNNIGNSFQNLKKYKDAAFNYEKALSINKFYIEGLFNKGSLLIEI 586
Query: 633 GEYREAV 639
++EA+
Sbjct: 587 RSFQEAI 593
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ F++I+ IG + + E AI + +A N + + ++
Sbjct: 420 KYEKALFYFEKIVDNKDFDIFFFIGNILKKL--EKFEKAIEYYEKAQLINQNDYYIYLQK 477
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G LG+ +EAI +A++ D +G + ++F+ A++ ++++ +
Sbjct: 478 GDCYFFLGKFLEAISCYDQAIQINEIFQDPFFNKGNAFYYLQNFSEAIKCYQKVIEINPQ 537
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ +Y +G + ++ +YK A + KA+ +++ ++E + ++ + ++A+ C
Sbjct: 538 DFKSYNNIGNSFQNLKKYKDAAFNYEKALSINKFYIEGLFNKGSLLIEIRSFQEAINCYD 597
Query: 576 QVL---------------------------------YIDKRFSKAYHLRGLL-----LHG 597
Q+L I KR +Y L+ + L
Sbjct: 598 QILEISNFNVASLYNKGNILFFYLQNYQESIKCYEEIIQKR--NSYLLQTFINVSKALIE 655
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ Q++KAI L ID NIE + + C + I ++ +A
Sbjct: 656 IQQYEKAISYFDQALKIDQYNIEAQFNKGICLNLIKKFEKA 696
>gi|425464999|ref|ZP_18844309.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9809]
gi|389832848|emb|CCI23201.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9809]
Length = 437
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 114/246 (46%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TRI++ + +RG+ + + KY A++ F + + DP Y EA RG Q +
Sbjct: 35 TRIAQGNNQDAIGHYNRGVGYIQQKKYDLALAEFTKAINIDPRYAEAYSNRGLLYLQQEK 94
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A+SDF +A+ NP EA+ RG G+ A+ D ++AL P A RG
Sbjct: 95 PDLALSDFNQALNINPRLAEAYNGRGFLYGVQGKPDLALSDYNQALNINPRLALAYSNRG 154
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + + + A+ + + + ++ AY GL G+ A +AI ++ F
Sbjct: 155 NLYRQQEKPDLALAEFNKALNINPRLAEAYYNRGLLYYEQGKPDLALSDFNQAININPRF 214
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
EA+ + Y+ + AL Q + I+ R++ AY+ RG L G+ A+ D +
Sbjct: 215 AEAYNNRGFLYRQQGKPDLALSDYNQAININPRYATAYNNRGFLYAEQGKPDLALSDFNQ 274
Query: 611 GLGIDP 616
L I+P
Sbjct: 275 ALNINP 280
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 5/274 (1%)
Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
KK+ + +K+I++D R + RG+ + + K A+S F+Q L +P EA G
Sbjct: 59 KKYDLALAEFTKAINIDPRYAEAYSNRGLLYLQQEKPDLALSDFNQALNINPRLAEAYNG 118
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG Q + + A+SD+ +A+ NP A+ RG + A+ + +KAL P
Sbjct: 119 RGFLYGVQGKPDLALSDYNQALNINPRLALAYSNRGNLYRQQEKPDLALAEFNKALNINP 178
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A+ + RG++ ++ + A+ D + + ++ AY G G+ A +
Sbjct: 179 RLAEAYYNRGLLYYEQGKPDLALSDFNQAININPRFAEAYNNRGFLYRQQGKPDLALSDY 238
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI ++ + A+ + Y + + AL Q L I+ R AY RGLL G+
Sbjct: 239 NQAININPRYATAYNNRGFLYAEQGKPDLALSDFNQALNINPRLDLAYSNRGLLYDIQGK 298
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
A+ D + L I+P R + Y+ G+
Sbjct: 299 PDLALSDYNQALNINPRFALAYNNRGTLYYKQGK 332
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A++ F++ L +P EA RG Q + + A+SDF +AI NP EA+ RG
Sbjct: 166 ALAEFNKALNINPRLAEAYYNRGLLYYEQGKPDLALSDFNQAININPRFAEAYNNRGFLY 225
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ A+ D ++A+ P A + RG + + + A+ D + + ++ A
Sbjct: 226 RQQGKPDLALSDYNQAININPRYATAYNNRGFLYAEQGKPDLALSDFNQALNINPRLDLA 285
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y+ GL G+ A + +A+ ++ F A+ + Y S+ AL Q L
Sbjct: 286 YSNRGLLYDIQGKPDLALSDYNQALNINPRFALAYNNRGTLYYKQGKSDLALSDYNQALN 345
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
I+ R + AY+ RG L + G+ A+ D + L I+P E R Y+
Sbjct: 346 INPRLALAYYNRGTLYYEQGKADLALSDFNQALNINPRFAEAYSNRGVLYY 396
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 5/238 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+++++ RL+ RG+ +GK A+S F+Q + +P + EA RG Q +
Sbjct: 171 NKALNINPRLAEAYYNRGLLYYEQGKPDLALSDFNQAININPRFAEAYNNRGFLYRQQGK 230
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A+SD+ +AI NP A+ RG A G+ A+ D ++AL P RG
Sbjct: 231 PDLALSDYNQAININPRYATAYNNRGFLYAEQGKPDLALSDFNQALNINPRLDLAYSNRG 290
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ + A+ D + + ++ AY G G+ A + +A+ ++
Sbjct: 291 LLYDIQGKPDLALSDYNQALNINPRFALAYNNRGTLYYKQGKSDLALSDYNQALNINPRL 350
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A+ + Y + ++ AL Q L I+ RF++AY RG+L + + +KAI+DL
Sbjct: 351 ALAYYNRGTLYYEQGKADLALSDFNQALNINPRFAEAYSNRGVLYYYRLEREKAIRDL 408
>gi|435852070|ref|YP_007313656.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
gi|433662700|gb|AGB50126.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
Length = 1078
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 133/283 (46%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
ETS K++ V ++ SVD ++GI+ N G Y ++ FD+ L DP +
Sbjct: 621 ETSGSVKKSINNDVPQLDIFTVDSVDAWSAKGISYQNIGNYNESLVCFDKALMLDPTSVK 680
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
L +G+A AI + AI +P AW G + G+S A L
Sbjct: 681 VLCDKGSALVEAGMDLWAIECYESAIAFDPGYSPAWYSLGVVSLSTGDSDRAQICFDNVL 740
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
EPN+ + ++G V F ++ A++ + + +D EN A++ G A ++ +Y A
Sbjct: 741 ALEPNNTSAMLQKGRVLFSTGSYDQALQYANTVISIDPENSQAFSDRGDAYYALEKYPDA 800
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
++ +A++LDR ++ + Y+ L ++A+ +++ A + +GL L
Sbjct: 801 ASSYDQALELDRGNVDILYKQSVAYEKLGQFDRAIGSYDKIIAEQPDSKDAIYHKGLALD 860
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+G++ A+ L +DPS+ + +A ++ G+Y++A+
Sbjct: 861 RMGRYDDAVACYDQLLELDPSDTLVMGTKAFSFYLRGDYQQAL 903
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 34/289 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G+ ++ G A FD +L +P A++ +G + A+ I +
Sbjct: 718 SLGVVSLSTGDSDRAQICFDNVLALEPNNTSAMLQKGRVLFSTGSYDQALQYANTVISID 777
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG A AL + +A +ALE + + DIL+++ + K F+ A+
Sbjct: 778 PENSQAFSDRGDAYYALEKYPDAASSYDQALELDRGNVDILYKQSVAYEKLGQFDRAIGS 837
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++K A + GLAL +G Y A + + ++LD + G +
Sbjct: 838 YDKIIAEQPDSKDAIYHKGLALDRMGRYDDAVACYDQLLELDPSDTLVMGTKAFSFYLRG 897
Query: 566 NSEKALECLQQVL----------------------------YIDKRFS------KAYHLR 591
+ ++AL QVL Y DK A++ +
Sbjct: 898 DYQQALAGFDQVLAIDPTSVSAMYHKGTISYLVSSYKGSIYYYDKTLELDPTCVTAWYNK 957
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
G + + +GQ + +I S L IDPS+ LY + ++IG+ EA I
Sbjct: 958 GFIYNLIGQVETSISCYDSALAIDPSSRSVLYNKRFALYSIGKSSEAEI 1006
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 119/267 (44%), Gaps = 1/267 (0%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I K + ++ + + A N G +AS+I ++ +L EDP A + + + +
Sbjct: 260 ILKLEPLNAEALYGKARAATNLGDHASSIEAYNLLLSEDPYNINAWLLQAQSYDSLGQYT 319
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI+ + + + +P AW ++G+ +LG EAI+ +AL+ + + +
Sbjct: 320 DAINCYDQLLVLDPQNATAWNKKGRTLDSLGRYSEAIECYDRALQLNSDGFSGVSITDMS 379
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++ F D A+E + E+ + G A ++G+Y+ A ++ + +L+ N
Sbjct: 380 SYLFIDEVNAMECYNKSPTFSTESAHIWYDKGTAFYNLGKYEDAISSYDRVTELEPNSAI 439
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
W + + + L + A++ + L + ++ + RG+ L LG AIK L
Sbjct: 440 VWYNRAKAFDMLQKYDGAVDSYSKALNAES-CARVWFERGMDLDKLGLFADAIKSYDKAL 498
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAV 639
DP LY +AS + Y EA+
Sbjct: 499 KEDPGFSAALYAKASNLEKVERYTEAL 525
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 30/260 (11%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ A+ +D IL Y ++ G + +I+ F A+ P + W
Sbjct: 180 GRHEEAMVCYDHILDLFSTYANSMYDTGYSYLQVGRYNDSIASFDVALTMLPDDPKMWFA 239
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R A A+GE A+ D + L+ EP +A+ L+ + D +++E + + D
Sbjct: 240 RAAAYEAIGEYENALADYNNILKLEPLNAEALYGKARAATNLGDHASSIEAYNLLLSEDP 299
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N +A+ + S+G+Y A + + + LD AW + L +A+EC
Sbjct: 300 YNINAWLLQAQSYDSLGQYTDAINCYDQLLVLDPQNATAWNKKGRTLDSLGRYSEAIEC- 358
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN-IECL----------- 622
+ R L L+ G +I D+SS L ID N +EC
Sbjct: 359 --------------YDRALQLNSDGFSGVSITDMSSYLFIDEVNAMECYNKSPTFSTESA 404
Query: 623 ---YLRASCYHAIGEYREAV 639
Y + + ++ +G+Y +A+
Sbjct: 405 HIWYDKGTAFYNLGKYEDAI 424
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 5/187 (2%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C + + S +G A N GKY AIS +D++ + +P A++ A+AF
Sbjct: 392 CYNKSPTFSTESAHIWYDKGTAFYNLGKYEDAISSYDRVTELEP--NSAIVWYNRAKAFD 449
Query: 429 --RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
++ + A+ +++A+ + S W RG LG +AI+ KAL+ +P + L
Sbjct: 450 MLQKYDGAVDSYSKALNAE-SCARVWFERGMDLDKLGLFADAIKSYDKALKEDPGFSAAL 508
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ + K + + A+ + ++L E+ + G+ L +G+Y++A A+ + + L
Sbjct: 509 YAKASNLEKVERYTEALTAYNKLLELHSESADIWYRKGMVLDKLGKYEEAIVAYEQTLAL 568
Query: 547 DRNFLEA 553
D + EA
Sbjct: 569 DPGYQEA 575
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 102/253 (40%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A KY A S +DQ L+ D + L + A + + AI + + I P
Sbjct: 787 RGDAYYALEKYPDAASSYDQALELDRGNVDILYKQSVAYEKLGQFDRAIGSYDKIIAEQP 846
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A +G A +G +A+ + LE +P+ ++ + + D+ A+
Sbjct: 847 DSKDAIYHKGLALDRMGRYDDAVACYDQLLELDPSDTLVMGTKAFSFYLRGDYQQALAGF 906
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +D + SA + G + YK + + K ++LD + AW + Y +
Sbjct: 907 DQVLAIDPTSVSAMYHKGTISYLVSSYKGSIYYYDKTLELDPTCVTAWYNKGFIYNLIGQ 966
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E ++ C L ID + + L+ +G+ +A + IDP L R
Sbjct: 967 VETSISCYDSALAIDPSSRSVLYNKRFALYSIGKSSEAEICKETLESIDPGFEPSLKDRG 1026
Query: 627 SCYHAIGEYREAV 639
+ + Y E++
Sbjct: 1027 TKFFVPSTYSESL 1039
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 122/326 (37%), Gaps = 72/326 (22%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+ G +A AI +D+ LKEDP + AL + + A++ + + ++
Sbjct: 475 FERGMDLDKLGLFADAIKSYDKALKEDPGFSAALYAKASNLEKVERYTEALTAYNKLLEL 534
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD----ILHERGIVN------- 493
+ + + W R+G LG+ EAI + L +P + I+ + ++N
Sbjct: 535 HSESADIWYRKGMVLDKLGKYEEAIVAYEQTLALDPGYQEANLRIMIDTNLINADDTAES 594
Query: 494 ---------FKFKDFNAAVE------DLSACVK------------LDKENKSAYTYLGLA 526
F+ F V + S VK ++ A++ G++
Sbjct: 595 MKMVQTDKATMFQIFKGIVPTPLSNNETSGSVKKSINNDVPQLDIFTVDSVDAWSAKGIS 654
Query: 527 LSSIGEYKKAEEAHLKAIQLDRN----------------------------------FLE 552
+IG Y ++ KA+ LD +
Sbjct: 655 YQNIGNYNESLVCFDKALMLDPTSVKVLCDKGSALVEAGMDLWAIECYESAIAFDPGYSP 714
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
AW L +S++A C VL ++ + A +G +L G + +A++ ++ +
Sbjct: 715 AWYSLGVVSLSTGDSDRAQICFDNVLALEPNNTSAMLQKGRVLFSTGSYDQALQYANTVI 774
Query: 613 GIDPSNIECLYLRASCYHAIGEYREA 638
IDP N + R Y+A+ +Y +A
Sbjct: 775 SIDPENSQAFSDRGDAYYALEKYPDA 800
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 100/253 (39%), Gaps = 35/253 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ Y A+ F+Q L+ DP E L + + + ++A++ + +AI +
Sbjct: 37 QGLEMSRNASYTEALEFFEQALEIDPQSIEILENKAETQYLMGDPQSALNSY-DAILNKS 95
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ E ++G LG E++ ++E + F + +N +
Sbjct: 96 NSSEFLYKKGVMLENLGRYQESLN---------------IYEASLKKFDAQYYNQS---- 136
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + N S T+L L + D +++ H + L
Sbjct: 137 SDQSNVSSSNSSNATFL---------------TDLNGMAFDSEYIQLVYHKGRSLDGLGR 181
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A+ C +L + ++ + + G +G++ +I L + P + + + RA
Sbjct: 182 HEEAMVCYDHILDLFSTYANSMYDTGYSYLQVGRYNDSIASFDVALTMLPDDPKMWFARA 241
Query: 627 SCYHAIGEYREAV 639
+ Y AIGEY A+
Sbjct: 242 AAYEAIGEYENAL 254
>gi|345302037|ref|YP_004823939.1| hypothetical protein Rhom172_0153 [Rhodothermus marinus
SG0.5JP17-172]
gi|345111270|gb|AEN72102.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
marinus SG0.5JP17-172]
Length = 465
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 114/241 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI N G++ A+ +++ L+ DP+ E G LE A+ EA + NP
Sbjct: 113 GITLDNLGRFEEALQTYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPD 172
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E W G LG+ ++ + LE +P SAD + RGIV + F AVE
Sbjct: 173 HPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMGRFREAVESYD 232
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ + ++ SA+ G AL+++G+ + A E++ K ++++ + ++ Y++L
Sbjct: 233 YALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEY 292
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E A++ Q L D +++A++ G L + ++AI + + + P E Y +A
Sbjct: 293 ETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKAD 352
Query: 628 C 628
C
Sbjct: 353 C 353
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E A+ + +P+A +AW RRG + LG EA+Q +AL P + L G
Sbjct: 54 FEDALGAIDRLLALHPTASDAWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNLG 113
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
I F A++ +++D N Y LG+ L + ++A +A +A +L+ +
Sbjct: 114 ITLDNLGRFEEALQTYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDH 173
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
E W L Y L + E++L C + L +D + A++ RG++L+ +G+ ++A++
Sbjct: 174 PEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMGRFREAVESYDY 233
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I Y R + +G+ R A+
Sbjct: 234 ALAIQEDFGSAWYNRGNALTNLGDLRGAI 262
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 128/295 (43%), Gaps = 5/295 (1%)
Query: 350 FKWDMLKETSNEAKRNKKF-----CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
F D L+E + +F + R+ + D + RGI + G++ A+ +
Sbjct: 36 FDSDTLEEIATYYYERGRFEDALGAIDRLLALHPTASDAWMRRGILLSHLGRHEEALQAY 95
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
++ L +P E L+ G E A+ + A+Q +P E + G +
Sbjct: 96 ERALSLNPTDTETLVNLGITLDNLGRFEEALQTYERALQIDPLNDEIYYNLGITLERMDR 155
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
EA+Q L +A P+ ++ +E G + D ++ ++LD + A+ G
Sbjct: 156 LEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRG 215
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
+ L+ +G +++A E++ A+ + +F AW + +L + A+E ++VL I+
Sbjct: 216 IVLNRMGRFREAVESYDYALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGD 275
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y+ L L +++ AI+ L DP+ E Y CY A+ + EA+
Sbjct: 276 PATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAI 330
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 111/276 (40%), Gaps = 48/276 (17%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSI--SVDFRLS-----------RGIAQVNEGKYASAI 401
L S +A N+ + R+ + + S D+ L+ RG A N G AI
Sbjct: 203 LDPYSADAWYNRGIVLNRMGRFREAVESYDYALAIQEDFGSAWYNRGNALTNLGDLRGAI 262
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
++++L+ + P A +E E AI F A++ +P+ EAW G A
Sbjct: 263 ESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDA 322
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
L EAI + +A+ +P +++ + + + + A++ ++LD +N+ A+
Sbjct: 323 LERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIELDPQNRDAWL 382
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
L G +++ +A+ +A+ L+ +
Sbjct: 383 DYAETLLEAGYVEESLQAYRQALTLNPD-------------------------------- 410
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++AY + L LG+ ++ I+ L L +DPS
Sbjct: 411 ---ARAYIRQARALLALGRSEEGIRSLKMALRLDPS 443
>gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424]
gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 632
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 127/267 (47%), Gaps = 7/267 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D +G A NEG + A IF Q++K +P +A G A Q +LE AI+ +
Sbjct: 25 NIDQLFEQGNAAQNEGNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIAAYN 84
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AI+ NP+ E + G A G+ EAI + A+E PN A++ G
Sbjct: 85 TAIEINPNYAEVYNNLGVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNLGFALSNQGKL 144
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ + ++++ AY LG+AL + G+ ++A A+ KAI+++ N+ E + +L
Sbjct: 145 EEAIAAYNKAIEINPNYAFAYIGLGIALYNQGKLEEAIAAYNKAIEINPNYAEVYSNLGF 204
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ E+A+ + I+ + AY+ G+ L G+ ++AI ++ + I+P++
Sbjct: 205 ALYNQGKLEEAIAAYNTAIEINPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEINPNDA 264
Query: 620 -------ECLYLRASCYHAIGEYREAV 639
LY + AI Y A+
Sbjct: 265 FAYNNLGVALYNQGKLEEAIAAYNTAI 291
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 5/292 (1%)
Query: 353 DMLKETSNEAKRNKKF-----CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQI 407
D L E N A+ F ++ K + D GIA N+GK AI+ ++
Sbjct: 27 DQLFEQGNAAQNEGNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIAAYNTA 86
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ +P Y E G A +Q +LE AI+ + AI+ NP+ E + G A + G+ E
Sbjct: 87 IEINPNYAEVYNNLGVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNLGFALSNQGKLEE 146
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI +KA+E PN A GI + A+ + ++++ Y+ LG AL
Sbjct: 147 AIAAYNKAIEINPNYAFAYIGLGIALYNQGKLEEAIAAYNKAIEINPNYAEVYSNLGFAL 206
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ G+ ++A A+ AI+++ N A+ +L + E+A+ + I+ + A
Sbjct: 207 YNQGKLEEAIAAYNTAIEINPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEINPNDAFA 266
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y+ G+ L+ G+ ++AI ++ + I+P++ H G+ EA+
Sbjct: 267 YNNLGVALYNQGKLEEAIAAYNTAIEINPNDAFAYIGLGIALHDQGKLEEAI 318
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 27/170 (15%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA N+GK AI+ ++ ++ +P A G A Q +LE AI+ + AI+ NP+
Sbjct: 237 GIALSNQGKLEEAIAAYNTAIEINPNDAFAYNNLGVALYNQGKLEEAIAAYNTAIEINPN 296
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A G+ EAI +K L AD A+V L
Sbjct: 297 DAFAYIGLGIALHDQGKLEEAIAAYNKTLSLADKKAD---------------RASVHTL- 340
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
A+T LG AL G+ ++A + KA+++D N A +L
Sbjct: 341 -----------AHTTLGYALQQQGKLEEAIAEYEKALKIDPNNTTAQNNL 379
>gi|428320334|ref|YP_007118216.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428244014|gb|AFZ09800.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 560
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 5/245 (2%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+AI+ FD+ ++ + YPEA IGRG + R+ E AI+ F +AIQ NP+ EAW RG A
Sbjct: 284 AAIACFDRAIQINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAIQINPNFPEAWLGRGIA 343
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
A L EAI S AL+ E N + + RG K + + A+ + L E +
Sbjct: 344 LAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISLTSEAEI 403
Query: 519 AYTYLGL----ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +GL AL + +Y++A A+ + I++ + EAW L E+AL
Sbjct: 404 T-SKVGLQQGAALEKLQQYEQAVAAYNRVIKIVPDNFEAWLKRGNALSKLQQYEQALASY 462
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + I + + RGL+L + + +A+ + + P N E R +
Sbjct: 463 DRAITIWPDNYQGWVQRGLILGEMQNYSQALVAFDRVIQLKPDNWEAWAQRGDVLQKLQR 522
Query: 635 YREAV 639
++A+
Sbjct: 523 TQDAI 527
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 5/261 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R + S + + RG + AI+ FDQ ++ +P +PEA +GRG A A
Sbjct: 288 CFDRAIQINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAIQINPNFPEAWLGRGIALAGL 347
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ AI ++ A+Q + EAW RG+A L + EAI K + + A+I +
Sbjct: 348 ERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISLT-SEAEITSK 406
Query: 489 RGIVNF----KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
G+ K + + AV + +K+ +N A+ G ALS + +Y++A ++ +AI
Sbjct: 407 VGLQQGAALEKLQQYEQAVAAYNRVIKIVPDNFEAWLKRGNALSKLQQYEQALASYDRAI 466
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ + + W ++ N +AL +V+ + +A+ RG +L L + + A
Sbjct: 467 TIWPDNYQGWVQRGLILGEMQNYSQALVAFDRVIQLKPDNWEAWAQRGDVLQKLQRTQDA 526
Query: 605 IKDLSSGLGIDPSNIECLYLR 625
I L I P E L R
Sbjct: 527 ISSYGVALEIKPDYYEALVSR 547
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 38/258 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA KYA A++ +D++L+ P EA +G A Q +AAI+ F AIQ
Sbjct: 237 FNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAWFYKGMALKHQWA-DAAIACFDRAIQI 295
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N EAW RGQ LS++ +FE A+
Sbjct: 296 NSFYPEAWIGRGQT-------------LSESRDFE---------------------GAIA 321
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ A+ G+AL+ + YK+A A+ A+Q++ NFLEAW + + L
Sbjct: 322 AFDQAIQINPNFPEAWLGRGIALAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKL 381
Query: 565 ANSEKALECLQQVLYIDKR---FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
E+A+ C +V+ + SK +G L L Q+++A+ + + I P N E
Sbjct: 382 QQYEEAIACFDKVISLTSEAEITSKVGLQQGAALEKLQQYEQAVAAYNRVIKIVPDNFEA 441
Query: 622 LYLRASCYHAIGEYREAV 639
R + + +Y +A+
Sbjct: 442 WLKRGNALSKLQQYEQAL 459
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 33/288 (11%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG ++ ++ AI+ FD ++ + EA RG ++ +AA + + A Q
Sbjct: 101 MLRGTGLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWDAAATCYKRATQL 160
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ W R+G EA+ +AL+ P + + RG+ K + + AV
Sbjct: 161 HPNLPAMWYRQGNVLLQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAERYAEAVT 220
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------- 556
++L +N A+ G+A + + +Y +A A+ + +Q+ N EAW +
Sbjct: 221 SYDRAIQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAWFYKGMALKHQ 280
Query: 557 --------------LTQFY--------QDLANS---EKALECLQQVLYIDKRFSKAYHLR 591
+ FY Q L+ S E A+ Q + I+ F +A+ R
Sbjct: 281 WADAAIACFDRAIQINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAIQINPNFPEAWLGR 340
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G+ L GL ++K+AI S+ L I+ + +E LR + +Y EA+
Sbjct: 341 GIALAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAI 388
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 113/318 (35%), Gaps = 77/318 (24%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y +A+ + + ++ P + A + G A ++ A NP AW
Sbjct: 43 GRYEAAVLCYGKAVQIKPDWARAWLNLGKAYKQLHSYAETVACADRATAINPEEYWAWML 102
Query: 455 RG----------QARAAL-----------------GESVEAIQDL-------SKALEFEP 480
RG +A AA G +E +Q +A + P
Sbjct: 103 RGTGLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWDAAATCYKRATQLHP 162
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N + + +G V + + + AV +KL N A+ GLAL Y +A ++
Sbjct: 163 NLPAMWYRQGNVLLQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAERYAEAVTSY 222
Query: 541 LKAIQL----------------------------DR------NFLEAWGHLTQFYQDLA- 565
+AIQL DR N EAW FY+ +A
Sbjct: 223 DRAIQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAW-----FYKGMAL 277
Query: 566 ---NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
++ A+ C + + I+ + +A+ RG L + AI + I+P+ E
Sbjct: 278 KHQWADAAIACFDRAIQINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAIQINPNFPEAW 337
Query: 623 YLRASCYHAIGEYREAVI 640
R + Y+EA+I
Sbjct: 338 LGRGIALAGLERYKEAII 355
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 12/191 (6%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF--KFKDFNAAVEDLSAC--- 509
RG A G A+ KA++ +P+ A R +N +K ++ E + AC
Sbjct: 35 RGNRLYASGRYEAAVLCYGKAVQIKPDWA-----RAWLNLGKAYKQLHSYAETV-ACADR 88
Query: 510 -VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++ E A+ G L S+ + +A A AIQ++ EAW + ++L +
Sbjct: 89 ATAINPEEYWAWMLRGTGLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWD 148
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
A C ++ + ++ +G +L ++ +A+ L + P+N E R
Sbjct: 149 AAATCYKRATQLHPNLPAMWYRQGNVLLQAERYPEAVAAFERALKLVPTNWEAWLNRGLA 208
Query: 629 YHAIGEYREAV 639
Y EAV
Sbjct: 209 LMKAERYAEAV 219
>gi|354565710|ref|ZP_08984884.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353548583|gb|EHC18028.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 846
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G+ A+ +D+ L P Y +A R A E A++ + + +
Sbjct: 486 NRGIALYFLGRDQEAVISYDKALAIKPDYHQAYYSRCQALENLGRYEEAVASYEQVLALK 545
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G A AL EA+ +AL +P+ + +V + + V
Sbjct: 546 PDHYQAWYHKGNALYALKHYDEAVTSYDQALALKPDYYQAWYNGSVVLYLLGLYEEVVRS 605
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V+ E+ A+ +G AL +G Y++A A+ K + + ++ +AW + + L
Sbjct: 606 CEKVVEFKPEHYQAWYNMGNALYFLGHYEEAVAAYDKVLLIKPDYDQAWYNRSIALYPLG 665
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++ + + + I KA++ RG L+ LG++K+A+ L I P E Y R
Sbjct: 666 FYQEVVASCDKAVAIAPDHYKAWYNRGNGLYSLGKYKEALASYDKALTIKPDYYEAWYNR 725
Query: 626 ASCYHAIGEYREAVI 640
+G+Y+EAV+
Sbjct: 726 GVVMANLGDYKEAVV 740
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 124/274 (45%), Gaps = 3/274 (1%)
Query: 370 VTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
V K+ +I D+ SR A N G+Y A++ ++Q+L P + +A +G A
Sbjct: 501 VISYDKALAIKPDYHQAYYSRCQALENLGRYEEAVASYEQVLALKPDHYQAWYHKGNALY 560
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ + A++ + +A+ P +AW LG E ++ K +EF+P
Sbjct: 561 ALKHYDEAVTSYDQALALKPDYYQAWYNGSVVLYLLGLYEEVVRSCEKVVEFKPEHYQAW 620
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ G + + AV + + + A+ +AL +G Y++ + KA+ +
Sbjct: 621 YNMGNALYFLGHYEEAVAAYDKVLLIKPDYDQAWYNRSIALYPLGFYQEVVASCDKAVAI 680
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +AW + L ++AL + L I + +A++ RG+++ LG +K+A+
Sbjct: 681 APDHYKAWYNRGNGLYSLGKYKEALASYDKALTIKPDYYEAWYNRGVVMANLGDYKEAVV 740
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L I P N + Y R + + +G Y+EA+I
Sbjct: 741 CYDKVLAIHPHNYQAWYSRGNALNKLGSYQEALI 774
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A++ +DQ L P Y +A E + + ++ P +AW G
Sbjct: 565 YDEAVTSYDQALALKPDYYQAWYNGSVVLYLLGLYEEVVRSCEKVVEFKPEHYQAWYNMG 624
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A LG EA+ K L +P+ + R I + + V V + ++
Sbjct: 625 NALYFLGHYEEAVAAYDKVLLIKPDYDQAWYNRSIALYPLGFYQEVVASCDKAVAIAPDH 684
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A+ G L S+G+YK+A ++ KA+ + ++ EAW + +L + ++A+ C +
Sbjct: 685 YKAWYNRGNGLYSLGKYKEALASYDKALTIKPDYYEAWYNRGVVMANLGDYKEAVVCYDK 744
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
VL I +A++ RG L+ LG +++A+ L+ + + P + E Y +A CY
Sbjct: 745 VLAIHPHNYQAWYSRGNALNKLGSYQEALISLNKAIALSPDSFEAHYNKACCY 797
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 122/264 (46%), Gaps = 2/264 (0%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAI 435
KS S +R +A G Y A+ +DQ L P +A RG A F R+ EA I
Sbjct: 443 KSDSYQGWYNRSLALHLSGCYEEAVDSYDQALAIKPDLDQAWYNRGIALYFLGRDQEAVI 502
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
S + +A+ P +A+ R QA LG EA+ + L +P+ + +G +
Sbjct: 503 S-YDKALAIKPDYHQAYYSRCQALENLGRYEEAVASYEQVLALKPDHYQAWYHKGNALYA 561
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
K ++ AV + L + A+ + L +G Y++ + K ++ +AW
Sbjct: 562 LKHYDEAVTSYDQALALKPDYYQAWYNGSVVLYLLGLYEEVVRSCEKVVEFKPEHYQAWY 621
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
++ L + E+A+ +VL I + +A++ R + L+ LG +++ + + I
Sbjct: 622 NMGNALYFLGHYEEAVAAYDKVLLIKPDYDQAWYNRSIALYPLGFYQEVVASCDKAVAIA 681
Query: 616 PSNIECLYLRASCYHAIGEYREAV 639
P + + Y R + +++G+Y+EA+
Sbjct: 682 PDHYKAWYNRGNGLYSLGKYKEAL 705
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y A++ +D++L P Y +A R A + ++ +A+ P +AW
Sbjct: 631 GHYEEAVAAYDKVLLIKPDYDQAWYNRSIALYPLGFYQEVVASCDKAVAIAPDHYKAWYN 690
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG +LG+ EA+ KAL +P+ + + RG+V D+ AV + +
Sbjct: 691 RGNGLYSLGKYKEALASYDKALTIKPDYYEAWYNRGVVMANLGDYKEAVVCYDKVLAIHP 750
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N A+ G AL+ +G Y++A + KAI L + EA + Y N E ALE L
Sbjct: 751 HNYQAWYSRGNALNKLGSYQEALISLNKAIALSPDSFEAHYNKACCYALQQNLELALESL 810
Query: 575 QQVL 578
Q+ +
Sbjct: 811 QRAI 814
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 2/257 (0%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F L + N K A++ FD +L + + RG A E A++ + +A+
Sbjct: 383 FNLGCQLLNFNHPK--QALTCFDHLLTFNREISDIWFYRGIALYLLANYEEAVTSYDKAL 440
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ + W R A G EA+ +AL +P+ + RGI + A
Sbjct: 441 ALKSDSYQGWYNRSLALHLSGCYEEAVDSYDQALAIKPDLDQAWYNRGIALYFLGRDQEA 500
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
V + + + AY AL ++G Y++A ++ + + L + +AW H
Sbjct: 501 VISYDKALAIKPDYHQAYYSRCQALENLGRYEEAVASYEQVLALKPDHYQAWYHKGNALY 560
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
L + ++A+ Q L + + +A++ ++L+ LG +++ ++ + P + +
Sbjct: 561 ALKHYDEAVTSYDQALALKPDYYQAWYNGSVVLYLLGLYEEVVRSCEKVVEFKPEHYQAW 620
Query: 623 YLRASCYHAIGEYREAV 639
Y + + +G Y EAV
Sbjct: 621 YNMGNALYFLGHYEEAV 637
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + GKY A++ +D+ L P Y EA RG A + + A+ + + + +
Sbjct: 690 NRGNGLYSLGKYKEALASYDKALTIKPDYYEAWYNRGVVMANLGDYKEAVVCYDKVLAIH 749
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A LG EA+ L+KA+ P+S + + + ++ A+E
Sbjct: 750 PHNYQAWYSRGNALNKLGSYQEALISLNKAIALSPDSFEAHYNKACCYALQQNLELALES 809
Query: 506 LSACVKLDKE 515
L + L+ E
Sbjct: 810 LQRAISLNPE 819
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA G Y ++ D+ + P + +A RG + + A++ + +A+
Sbjct: 656 NRSIALYPLGFYQEVVASCDKAVAIAPDHYKAWYNRGNGLYSLGKYKEALASYDKALTIK 715
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG+ EA+ K L P++ + RG K + A+
Sbjct: 716 PDYYEAWYNRGVVMANLGDYKEAVVCYDKVLAIHPHNYQAWYSRGNALNKLGSYQEALIS 775
Query: 506 LSACVKLDKENKSAY 520
L+ + L ++ A+
Sbjct: 776 LNKAIALSPDSFEAH 790
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEI-QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L +L+++ +A+ D LA + Q N + L L++ V+R C+K ++ P Q
Sbjct: 559 LYALKHYDEAVTSYDQALALKPDYYQAWYNGSVVLYLLGLYEEVVRSCEKVVEFKPEHYQ 618
Query: 105 AYILKGCAFSALGRKEEALSVWEK 128
A+ G A LG EEA++ ++K
Sbjct: 619 AWYNMGNALYFLGHYEEAVAAYDK 642
>gi|425440272|ref|ZP_18820578.1| putative Tetratricopeptide repeat protein [Microcystis aeruginosa PCC
9717]
gi|389719348|emb|CCH96816.1| putative Tetratricopeptide repeat protein [Microcystis aeruginosa PCC
9717]
Length = 1539
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 126/246 (51%), Gaps = 6/246 (2%)
Query: 367 KFCVTRISKSKSISVD---FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
K + +K+ + D + +RG A + Y AI+ + + ++ P +A GR
Sbjct: 937 KAAIVDYTKAIGLKPDEAWYYYNRGDAYRLQEDYKEAIADYTEAIRLKPDLADAFNGRAI 996
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
A Q+ + AI+D+TEAI+ +P E + R Q R LG+ A+ DL++A+ +P+
Sbjct: 997 TYARQKNYQGAIADYTEAIRLDPKYDENYYSRSQVRQELGDLQGALADLNEAVRLDPDDV 1056
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
L ERG + + KD+ A+ D + ++L + AY GLA +Y +A + + +A
Sbjct: 1057 GNLRERGDIRRQLKDYQEAIADYTEAIRLKPDFADAYNARGLAYHLQEKYPEAIKDYSEA 1116
Query: 544 IQL-DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
+++ + F +G+ + ++ + ++A+ + + + F+ AY+ RGL +G +
Sbjct: 1117 VRIYPKPFY--YGNRGEAHRLQGDYQEAITDYTEAIGLKPDFADAYNARGLAKAEIGDKQ 1174
Query: 603 KAIKDL 608
AI+DL
Sbjct: 1175 GAIEDL 1180
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 22/274 (8%)
Query: 382 DFRLSRGIA-QVNE-GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
DF L +A +NE G+Y A+ ++ +K P + E+ RG R + + AI+D
Sbjct: 645 DFILYNWLAVPLNELGRYPEALKSGNKAIKIKPDHAESYFRRGQTRRYMGDYRGAIADVN 704
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EA++ P A++ RG ++ G++ AI D+++AL +P++A RGIV + D
Sbjct: 705 EALRLQPDLAIAYQFRGTLKSEQGDNQGAIADINEALRLQPDNAGAYAARGIVYARMGDQ 764
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
ED + + L ++ + G A + +Y+KA E + +AI+L A Q
Sbjct: 765 QRLAEDFNKALSLQPDDAWIHQNRGYARFILKDYQKAVEDYTEAIRL------APESAYQ 818
Query: 560 FYQDLA-------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
FY + + +KA+E + L + AY RG LG + +D L
Sbjct: 819 FYTERGFVRYQQEDYKKAIEDYTEALRFRPNYVMAYVRRGEAYAKLGNQQGFTEDFKKAL 878
Query: 613 GIDPSNIECLYLRASCYH-------AIGEYREAV 639
+ P N R Y IG+Y EA+
Sbjct: 879 SLQPDNAWIYTERGDTYFFLKDKQKGIGDYDEAI 912
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 90/173 (52%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++S+ +VD L RGIA Y +AI+ +++ ++ P A RG A Q
Sbjct: 1215 QVSRGNPQNVDAHLGRGIASYKREDYQTAIAEYNEAIRLAPQNAFAYNLRGNAYFAQENY 1274
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI D+T+AI+ NP A+ RG L E A+ D ++A+ +P+ AD +RG
Sbjct: 1275 QQAIKDYTQAIRLNPKFAVAYSNRGNIYYELEEYKSAVSDYTEAIRIKPDDADFYFKRGD 1334
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ +D++ A+ D + ++L + +AY Y G++ S +Y+ A + +AI
Sbjct: 1335 ARDQSEDYSGAIADYTEAIRLKPDYTTAYYYRGISKSKQKDYQAAISDYSQAI 1387
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 125/294 (42%), Gaps = 44/294 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAISDFTE 440
+RG A+ Y A+ + + ++ P Y E RG R Q + + AI D+TE
Sbjct: 787 NRGYARFILKDYQKAVEDYTEAIRLAPESAYQFYTE----RGFVRYQQEDYKKAIEDYTE 842
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK--- 497
A++ P+ A+ RRG+A A LG +D KAL +P++A I ERG F K
Sbjct: 843 ALRFRPNYVMAYVRRGEAYAKLGNQQGFTEDFKKALSLQPDNAWIYTERGDTYFFLKDKQ 902
Query: 498 --------------------------------DFNAAVEDLSACVKLDKENKSAYTYLGL 525
D+ AA+ D + + L + Y G
Sbjct: 903 KGIGDYDEAIRLAPELADFYYNWRGNQFYGQEDYKAAIVDYTKAIGLKPDEAWYYYNRGD 962
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
A +YK+A + +AI+L + +A+ Y N + A+ + + +D ++
Sbjct: 963 AYRLQEDYKEAIADYTEAIRLKPDLADAFNGRAITYARQKNYQGAIADYTEAIRLDPKYD 1022
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ Y+ R + LG + A+ DL+ + +DP ++ L R + +Y+EA+
Sbjct: 1023 ENYYSRSQVRQELGDLQGALADLNEAVRLDPDDVGNLRERGDIRRQLKDYQEAI 1076
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 38/289 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALI--GRGTARAFQRELEAAISDFTEAIQ 443
+RG+A + KY AI + + ++ +YP+ RG A Q + + AI+D+TEAI
Sbjct: 1095 ARGLAYHLQEKYPEAIKDYSEAVR---IYPKPFYYGNRGEAHRLQGDYQEAITDYTEAIG 1151
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF------------------------- 478
P +A+ RG A+A +G+ AI+DL KA +
Sbjct: 1152 LKPDFADAYNARGLAKAEIGDKQGAIEDLQKAAQLFREQGNDDAYQVAQTKIREIQGIST 1211
Query: 479 --------EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
P + D RGI ++K +D+ A+ + + ++L +N AY G A +
Sbjct: 1212 EDEQVSRGNPQNVDAHLGRGIASYKREDYQTAIAEYNEAIRLAPQNAFAYNLRGNAYFAQ 1271
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
Y++A + + +AI+L+ F A+ + Y +L + A+ + + I + Y
Sbjct: 1272 ENYQQAIKDYTQAIRLNPKFAVAYSNRGNIYYELEEYKSAVSDYTEAIRIKPDDADFYFK 1331
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG + AI D + + + P Y R +Y+ A+
Sbjct: 1332 RGDARDQSEDYSGAIADYTEAIRLKPDYTTAYYYRGISKSKQKDYQAAI 1380
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 5/210 (2%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN---SADI 485
R + A +AI+ PS EAW G A + + EA + KAL ++P D+
Sbjct: 555 RRYQQAQIALEKAIEIKPSY-EAWFVHGMALKSQKKYQEAKKSFQKALTYKPEYKVDKDL 613
Query: 486 -LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
L + G + D+ AV+ ++L ++ Y +L + L+ +G Y +A ++ KAI
Sbjct: 614 ALRQVGDSAWYSGDYEEAVKAFKEAIELKPDDFILYNWLAVPLNELGRYPEALKSGNKAI 673
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++ + E++ Q + + + A+ + + L + + AY RG L G ++ A
Sbjct: 674 KIKPDHAESYFRRGQTRRYMGDYRGAIADVNEALRLQPDLAIAYQFRGTLKSEQGDNQGA 733
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
I D++ L + P N R Y +G+
Sbjct: 734 IADINEALRLQPDNAGAYAARGIVYARMGD 763
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T + K DF RG A+ Y+ AI+ + + ++ P Y A RG +++ Q++
Sbjct: 1316 TEAIRIKPDDADFYFKRGDARDQSEDYSGAIADYTEAIRLKPDYTTAYYYRGISKSKQKD 1375
Query: 431 LEAAISDFTEAI 442
+AAISD+++AI
Sbjct: 1376 YQAAISDYSQAI 1387
>gi|427715955|ref|YP_007063949.1| hypothetical protein Cal7507_0626 [Calothrix sp. PCC 7507]
gi|427348391|gb|AFY31115.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 1174
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 6/256 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q G + AIS +D+ L+ P Y EA RG A + + E AI+ F + + P
Sbjct: 205 GVKQTMIGDFEGAISSYDKALEIKPGYYEAWYLRGYALSNLKRNEEAIASFDKVLAIQPD 264
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW R+G A L +AI +A++ +P++ + H +G + K ++ A+
Sbjct: 265 YYAAWNRKGAALDHLKRYEDAIASFDQAIKIDPDNHEAWHNKGNMLDKLGEYEKALISYD 324
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL---KAIQLDRNFLEAWGHLTQFYQDL 564
+LD S + G+ L+S+G + EEA L KA+ + N AW + +L
Sbjct: 325 KAQQLDSSCYSGWNARGVTLTSLG---RDEEAILSCDKALAIQPNDHLAWFNRGNALVNL 381
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+AL + L I+ F +A+ RG L LG +++AI L I P +
Sbjct: 382 GRYEEALTSSNKALEIEPNFHQAWDNRGTALRNLGCYEEAILSYDKALEIQPDYHQVWDN 441
Query: 625 RASCYHAIGEYREAVI 640
R +G Y EA++
Sbjct: 442 RGIALGNLGRYEEAIL 457
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G+ AI D+ L P A RG A E A++ +A++
Sbjct: 339 ARGVTLTSLGRDEEAILSCDKALAIQPNDHLAWFNRGNALVNLGRYEEALTSSNKALEIE 398
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +AW RG A LG EAI KALE +P+ + RGI + A+
Sbjct: 399 PNFHQAWDNRGTALRNLGCYEEAILSYDKALEIQPDYHQVWDNRGIALGNLGRYEEAILS 458
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S +++ + A+ G AL ++G +++A ++ KAI++ NF AW + +L
Sbjct: 459 SSKALEIQPDFHYAWNNRGFALGNLGCHEEAILSYDKAIEIQPNFHLAWNNRGNTLLNLG 518
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
E+A+ + L I F A + RG+ L LG++++AI L I P
Sbjct: 519 RYEEAILSCDKALEIQPDFHPALYNRGIALLNLGRYEEAILSYDKALAIQP 569
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 2/274 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGK--YASAISIFDQILKEDPMYPEALIGRGTARA 426
T + + ++ F + GI + E K + + + I +E P G +
Sbjct: 150 LFTLLQNNNNVVHPFIQNLGITTIPEVKTNFPALTYQINNIAQEIENIPTTWFDLGVKQT 209
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ E AIS + +A++ P EAW RG A + L + EAI K L +P+
Sbjct: 210 MIGDFEGAISSYDKALEIKPGYYEAWYLRGYALSNLKRNEEAIASFDKVLAIQPDYYAAW 269
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +G K + A+ +K+D +N A+ G L +GEY+KA ++ KA QL
Sbjct: 270 NRKGAALDHLKRYEDAIASFDQAIKIDPDNHEAWHNKGNMLDKLGEYEKALISYDKAQQL 329
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
D + W L E+A+ + L I A+ RG L LG++++A+
Sbjct: 330 DSSCYSGWNARGVTLTSLGRDEEAILSCDKALAIQPNDHLAWFNRGNALVNLGRYEEALT 389
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ L I+P+ + R + +G Y EA++
Sbjct: 390 SSNKALEIEPNFHQAWDNRGTALRNLGCYEEAIL 423
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 18/288 (6%)
Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
KRN++ + K +I D+ + +G A + +Y AI+ FDQ +K DP EA
Sbjct: 246 KRNEE-AIASFDKVLAIQPDYYAAWNRKGAALDHLKRYEDAIASFDQAIKIDPDNHEAWH 304
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
+G E E A+ + +A Q + S W RG +LG EAI KAL +
Sbjct: 305 NKGNMLDKLGEYEKALISYDKAQQLDSSCYSGWNARGVTLTSLGRDEEAILSCDKALAIQ 364
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
PN RG + A+ + ++++ A+ G AL ++G Y++A +
Sbjct: 365 PNDHLAWFNRGNALVNLGRYEEALTSSNKALEIEPNFHQAWDNRGTALRNLGCYEEAILS 424
Query: 540 HLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ KA+++ ++ + W G+L ++ + + +S KALE I F A++ RG
Sbjct: 425 YDKALEIQPDYHQVWDNRGIALGNLGRYEEAILSSSKALE-------IQPDFHYAWNNRG 477
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L LG H++AI + I P+ R + +G Y EA++
Sbjct: 478 FALGNLGCHEEAILSYDKAIEIQPNFHLAWNNRGNTLLNLGRYEEAIL 525
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 118/254 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A N + AI+ FD++L P Y A +G A + E AI+ F +AI+ +P
Sbjct: 238 RGYALSNLKRNEEAIASFDKVLAIQPDYYAAWNRKGAALDHLKRYEDAIASFDQAIKIDP 297
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW +G LGE +A+ KA + + + + RG+ A+
Sbjct: 298 DNHEAWHNKGNMLDKLGEYEKALISYDKAQQLDSSCYSGWNARGVTLTSLGRDEEAILSC 357
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + A+ G AL ++G Y++A + KA++++ NF +AW + ++L
Sbjct: 358 DKALAIQPNDHLAWFNRGNALVNLGRYEEALTSSNKALEIEPNFHQAWDNRGTALRNLGC 417
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A+ + L I + + + RG+ L LG++++AI S L I P R
Sbjct: 418 YEEAILSYDKALEIQPDYHQVWDNRGIALGNLGRYEEAILSSSKALEIQPDFHYAWNNRG 477
Query: 627 SCYHAIGEYREAVI 640
+G + EA++
Sbjct: 478 FALGNLGCHEEAIL 491
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T +K+ I +F + RG A N G Y AI +D+ L+ P Y + RG A
Sbjct: 387 ALTSSNKALEIEPNFHQAWDNRGTALRNLGCYEEAILSYDKALEIQPDYHQVWDNRGIAL 446
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI ++A++ P AW RG A LG EAI KA+E +PN
Sbjct: 447 GNLGRYEEAILSSSKALEIQPDFHYAWNNRGFALGNLGCHEEAILSYDKAIEIQPNFHLA 506
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG + A+ +++ + A G+AL ++G Y++A ++ KA+
Sbjct: 507 WNNRGNTLLNLGRYEEAILSCDKALEIQPDFHPALYNRGIALLNLGRYEEAILSYDKALA 566
Query: 546 LDRNFLEAW 554
+ + +AW
Sbjct: 567 IQPDIQQAW 575
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+Y AI + L+ P + A RG A E AI + +AI+
Sbjct: 441 NRGIALGNLGRYEEAILSSSKALEIQPDFHYAWNNRGFALGNLGCHEEAILSYDKAIEIQ 500
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW RG LG EAI KALE +P+ L+ RGI + A+
Sbjct: 501 PNFHLAWNNRGNTLLNLGRYEEAILSCDKALEIQPDFHPALYNRGIALLNLGRYEEAILS 560
Query: 506 LSACVKLDKENKSAYTYLGLA 526
+ + + + A+ G+A
Sbjct: 561 YDKALAIQPDIQQAWNNRGIA 581
>gi|449126815|ref|ZP_21763092.1| hypothetical protein HMPREF9733_00495, partial [Treponema denticola
SP33]
gi|448945453|gb|EMB26324.1| hypothetical protein HMPREF9733_00495, partial [Treponema denticola
SP33]
Length = 299
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 133/269 (49%), Gaps = 3/269 (1%)
Query: 352 WDMLKETSNEAKRNKK--FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
++M T+ E K + + T+ ++ ++ L+RG+ +N GK +A+ F+ +K
Sbjct: 7 FNMAGNTAKEKKDGTRAIYYYTKAIETDPYYIEAYLNRGVTYLNMGKKEAALHDFNTAIK 66
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
+P A +G A + AA + +AI N + + R + + E V ++
Sbjct: 67 LNPKEDSAYYWKGLVLAKIGKNGAARDNLNKAIALNNKNDQYYYTRARIYYGMEEYVHSL 126
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
DL+ A+ PN+A++ RGIV + ++ A++D + LD N ++Y L L ++
Sbjct: 127 NDLNTAVNLNPNAANLYETRGIVYQVLEKYDNAIKDYKKTISLDSHNLTSYKGLVLIYAA 186
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
EY KA EA +++ ++L + + + +L +KAL+ + + + + +Y+
Sbjct: 187 KKEYPKAIEAADILLEIKSDWL-IFNVRAKLFFELGQCDKALDDCNKAIKLYPYIAYSYY 245
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+RG + L +++KAIKD + + P +
Sbjct: 246 MRGWIYLQLKEYEKAIKDFDKAISLAPQD 274
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%)
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S E + G + AI +KA+E +P + RG+ AA+ D
Sbjct: 2 SQAEYFNMAGNTAKEKKDGTRAIYYYTKAIETDPYYIEAYLNRGVTYLNMGKKEAALHDF 61
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KL+ + SAY + GL L+ IG+ A + KAI L+ + + + Y +
Sbjct: 62 NTAIKLNPKEDSAYYWKGLVLAKIGKNGAARDNLNKAIALNNKNDQYYYTRARIYYGMEE 121
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+L L + ++ + Y RG++ L ++ AIKD + +D N+
Sbjct: 122 YVHSLNDLNTAVNLNPNAANLYETRGIVYQVLEKYDNAIKDYKKTISLDSHNLTSYKGLV 181
Query: 627 SCYHAIGEYREAV 639
Y A EY +A+
Sbjct: 182 LIYAAKKEYPKAI 194
>gi|189184045|ref|YP_001937830.1| TPR repeat-containing protein 01_07 [Orientia tsutsugamushi str.
Ikeda]
gi|189184392|ref|YP_001938177.1| TPR repeat-containing protein 01_09 [Orientia tsutsugamushi str.
Ikeda]
gi|189180816|dbj|BAG40596.1| TPR repeat-containing protein 01_07 [Orientia tsutsugamushi str.
Ikeda]
gi|189181163|dbj|BAG40943.1| TPR repeat-containing protein 01_09 [Orientia tsutsugamushi str.
Ikeda]
Length = 381
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK AI + D +K P Y A +G A E A+ +F AI+ N S EA+
Sbjct: 124 GKNEEAIILCDLAIKYKPNYVTAYNNKGAALNNLGRYEEAVENFDVAIRYNSSYPEAYYN 183
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG EAI++ A+ + PN ++ H +G+ F A+E +K D
Sbjct: 184 KGIALMYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKAIEHFDLAIKYDP 243
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +AY G LS + Y +A E+ AI+ + N EA+ ++ L +KA+E
Sbjct: 244 NDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFEKLGEQQKAIENY 303
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ F++ Y +G+ L LGQ+ KA ++ + P+ I
Sbjct: 304 DIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFKLAIKYMPNFI 348
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A N G+Y A+ FD ++ + YPEA +G A + ++ AI ++ AI+
Sbjct: 149 NKGAALNNLGRYEEAVENFDVAIRYNSSYPEAYYNKGIALMYLGYIQEAIENYDTAIRYR 208
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ +G A LG+ +AI+ A++++PN A +G V K ++ A+E
Sbjct: 209 PNYSEAYHNKGLTLAFLGQFQKAIEHFDLAIKYDPNDATAYCNKGYVLSMLKRYSEAIES 268
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ +K + AY G+ +GE +KA E + AI+ NF E +
Sbjct: 269 CNLAIKYNPNCAEAYYRRGMIFEKLGEQQKAIENYDIAIKYKPNFAENY 317
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 2/245 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKR 454
KY AI FD +K DP Y A +G A A + LE A+ ++ AI+ P EA+
Sbjct: 57 KYHEAIENFDIAIKHDPSYASAYNSKGIALADLGKALE-AVENYDLAIKHKPHFAEAYNN 115
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ + LG++ EAI A++++PN + +G + AVE+ ++ +
Sbjct: 116 KAVSYRKLGKNEEAIILCDLAIKYKPNYVTAYNNKGAALNNLGRYEEAVENFDVAIRYNS 175
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AY G+AL +G ++A E + AI+ N+ EA+ + L +KA+E
Sbjct: 176 SYPEAYYNKGIALMYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKAIEHF 235
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ D + AY +G +L L ++ +AI+ + + +P+ E Y R + +GE
Sbjct: 236 DLAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFEKLGE 295
Query: 635 YREAV 639
++A+
Sbjct: 296 QQKAI 300
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 1/200 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA + G AI +D ++ P Y EA +G AF + + AI F AI+ +
Sbjct: 183 NKGIALMYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKAIEHFDLAIKYD 242
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ +G + L EAI+ + A+++ PN A+ + RG++ K + A+E+
Sbjct: 243 PNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFEKLGEQQKAIEN 302
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K Y G++L S+G+Y KA+E AI+ NF+ + + +L
Sbjct: 303 YDIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFKLAIKYMPNFIAEYEATIKRLTELE 362
Query: 566 NSEKALECLQQVLYIDKRFS 585
N A E +Q L I K++S
Sbjct: 363 NFTIAKE-FEQKLQILKKYS 381
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQS 66
RL K H+ I D ++ D ASA ++ I LA L ++ N+ AI+ A++
Sbjct: 54 RLKKYHEAIENFDIAIKHDPSYASAYNSKGIALADLGKALEAVENYDLAIK-HKPHFAEA 112
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
Y N+A Y +L ++ I CD A++ P + AY KG A + LGR EEA+
Sbjct: 113 YN-----NKAVSYRKLGKNEEAIILCDLAIKYKPNYVTAYNNKGAALNNLGRYEEAV 164
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQD---ICNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
L L + KAI D LA Y+ D CN+ + S L+ + I C+ A++ +P
Sbjct: 222 LAFLGQFQKAIEHFD--LAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNC 279
Query: 103 LQAYILKGCAFSALGRKEEALSVWE 127
+AY +G F LG +++A+ ++
Sbjct: 280 AEAYYRRGMIFEKLGEQQKAIENYD 304
>gi|443329767|ref|YP_007378838.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428682393|gb|AFZ61157.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 227
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 83/151 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ +G + AI F Q++K +P Y E RG A++ + +AA+ DF + +Q N
Sbjct: 45 NQGVQKLEQGNFNGAIEDFSQVVKLNPRYYEGFCLRGLAKSQLGDFQAAVIDFNQVLQLN 104
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S + + RG A A LG AI D ++ L+ +P S D + RG +N++ + A+ D
Sbjct: 105 SSHTDGYNGRGMAHAELGNLQAAITDFNQVLKIDPQSVDAYYNRGFLNYRQGNHQMAISD 164
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ +K++ AY GLA ++G+ K A
Sbjct: 165 FNQSLKINPNLADAYGNRGLAKYALGDRKSA 195
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 8/188 (4%)
Query: 460 AALGESVEAIQDLSKALEFEPNSADIL--------HERGIVNFKFKDFNAAVEDLSACVK 511
A LG + + + A+ P S + + +G+ + +FN A+ED S VK
Sbjct: 9 AILGITTSVLSGIPTAVYAAPESPTPIPKMNFQEYYNQGVQKLEQGNFNGAIEDFSQVVK 68
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+ + GLA S +G+++ A + +QL+ + + + + +L N + A+
Sbjct: 69 LNPRYYEGFCLRGLAKSQLGDFQAAVIDFNQVLQLNSSHTDGYNGRGMAHAELGNLQAAI 128
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
QVL ID + AY+ RG L + G H+ AI D + L I+P+ + R +A
Sbjct: 129 TDFNQVLKIDPQSVDAYYNRGFLNYRQGNHQMAISDFNQSLKINPNLADAYGNRGLAKYA 188
Query: 632 IGEYREAV 639
+G+ + A+
Sbjct: 189 LGDRKSAI 196
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ G + +A+ F+Q+L+ + + + GRG A A L+AAI+DF + ++ +P
Sbjct: 80 RGLAKSQLGDFQAAVIDFNQVLQLNSSHTDGYNGRGMAHAELGNLQAAITDFNQVLKIDP 139
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG G AI D +++L+ PN AD RG+ + D +A+ DL
Sbjct: 140 QSVDAYYNRGFLNYRQGNHQMAISDFNQSLKINPNLADAYGNRGLAKYALGDRKSAITDL 199
Query: 507 SACVKLDKE 515
L ++
Sbjct: 200 QQAASLFQQ 208
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 34/188 (18%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + Q AI DF++ ++ NP E + RG A++ LG+ A+ D ++ L+
Sbjct: 46 QGVQKLEQGNFNGAIEDFSQVVKLNPRYYEGFCLRGLAKSQLGDFQAAVIDFNQVLQLNS 105
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ D + RG+ + + + AA+ D + +K+D ++ AY
Sbjct: 106 SHTDGYNGRGMAHAELGNLQAAITDFNQVLKIDPQSVDAY-------------------- 145
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+R FL Y+ N + A+ Q L I+ + AY RGL + LG
Sbjct: 146 -----YNRGFLN--------YRQ-GNHQMAISDFNQSLKINPNLADAYGNRGLAKYALGD 191
Query: 601 HKKAIKDL 608
K AI DL
Sbjct: 192 RKSAITDL 199
>gi|429124499|ref|ZP_19185031.1| hypothetical protein A966_09454 [Brachyspira hampsonii 30446]
gi|426279738|gb|EKV56759.1| hypothetical protein A966_09454 [Brachyspira hampsonii 30446]
Length = 422
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 34/230 (14%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G ++ G Y AI ++ L+ Y +A RGTA+ E AI DF +AI+ P
Sbjct: 210 GACKIGLGLYKDAIIDINKALEIYDEYTDAYNNRGTAKYNLELYEDAIKDFDKAIELYPQ 269
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ RG A++ALG +A++D SK++ EP D + R IV N AV+D
Sbjct: 270 YFYAYNNRGNAKSALGLYEDALEDFSKSINIEPKYIDAYYNRAIVKNNMGLHNEAVKDYD 329
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD N +AY GL+ ++ +Y
Sbjct: 330 IVIELDNNNINAYYNRGLSYYNLADY---------------------------------- 355
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
EKAL+ +V+ ++ + + AY+ RG + +G +++AI D + ID +
Sbjct: 356 EKALKDYDRVMELNPKLADAYNNRGFTKYSMGLYEEAINDYDKAIEIDAN 405
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 125/261 (47%), Gaps = 3/261 (1%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD + R ++ KY AI + + L+ D A G G A+ E AIS +
Sbjct: 135 NVDSYIDRAFIKLMSKKYIEAIEDYKKALELDDTEVYAYNGIGDAKRGMGLYEEAISYYK 194
Query: 440 EAIQ-SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+ I+ SN S A+ G + LG +AI D++KALE D + RG + +
Sbjct: 195 KVIELSNSSY--AYNNIGACKIGLGLYKDAIIDINKALEIYDEYTDAYNNRGTAKYNLEL 252
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A++D ++L + AY G A S++G Y+ A E K+I ++ +++A+ +
Sbjct: 253 YEDAIKDFDKAIELYPQYFYAYNNRGNAKSALGLYEDALEDFSKSINIEPKYIDAYYNRA 312
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++ +A++ V+ +D AY+ RGL + L ++KA+KD + ++P
Sbjct: 313 IVKNNMGLHNEAVKDYDIVIELDNNNINAYYNRGLSYYNLADYEKALKDYDRVMELNPKL 372
Query: 619 IECLYLRASCYHAIGEYREAV 639
+ R +++G Y EA+
Sbjct: 373 ADAYNNRGFTKYSMGLYEEAI 393
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 126/292 (43%), Gaps = 47/292 (16%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+++ G + AI+ + + + D Y E R EAAI D+ + I+ P+
Sbjct: 41 GLSKQALGFFEEAINYYSKGIDIDENYGELYYNRANCECNLGFYEAAIKDYDKVIELVPT 100
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ RG A+ LG +A++D+ KA+ + N+ D +R + K + A+ED
Sbjct: 101 HSRAYNDRGFAKGNLGLYEDALKDIDKAIVLDSNNVDSYIDRAFIKLMSKKYIEAIEDYK 160
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--------------------- 546
++LD AY +G A +G Y++A + K I+L
Sbjct: 161 KALELDDTEVYAYNGIGDAKRGMGLYEEAISYYKKVIELSNSSYAYNNIGACKIGLGLYK 220
Query: 547 ----DRN-FLEAWGHLT-------------QFYQD-LANSEKALECLQQVLYIDKRFSKA 587
D N LE + T + Y+D + + +KA+E Q Y A
Sbjct: 221 DAIIDINKALEIYDEYTDAYNNRGTAKYNLELYEDAIKDFDKAIELYPQYFY-------A 273
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y+ RG LG ++ A++D S + I+P I+ Y RA + +G + EAV
Sbjct: 274 YNNRGNAKSALGLYEDALEDFSKSINIEPKYIDAYYNRAIVKNNMGLHNEAV 325
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 87/168 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ N Y AI FD+ ++ P Y A RG A++ E A+ DF+++I
Sbjct: 242 NRGTAKYNLELYEDAIKDFDKAIELYPQYFYAYNNRGNAKSALGLYEDALEDFSKSINIE 301
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ R + +G EA++D +E + N+ + + RG+ + D+ A++D
Sbjct: 302 PKYIDAYYNRAIVKNNMGLHNEAVKDYDIVIELDNNNINAYYNRGLSYYNLADYEKALKD 361
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++L+ + AY G S+G Y++A + KAI++D N+ +A
Sbjct: 362 YDRVMELNPKLADAYNNRGFTKYSMGLYEEAINDYDKAIEIDANYEKA 409
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 132/305 (43%), Gaps = 44/305 (14%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK I +D +R + N G Y +AI +D++++ P + A RG A+
Sbjct: 58 SKGIDIDENYGELYYNRANCECNLGFYEAAIKDYDKVIELVPTHSRAYNDRGFAKGNLGL 117
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI----- 485
E A+ D +AI + + +++ R + + +EAI+D KALE +
Sbjct: 118 YEDALKDIDKAIVLDSNNVDSYIDRAFIKLMSKKYIEAIEDYKKALELDDTEVYAYNGIG 177
Query: 486 -------LHERGIVNFK------------------------FKDFNAAVEDLSACVKLDK 514
L+E I +K +KD A+ D++ +++
Sbjct: 178 DAKRGMGLYEEAISYYKKVIELSNSSYAYNNIGACKIGLGLYKD---AIIDINKALEIYD 234
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E AY G A ++ Y+ A + KAI+L + A+ + L E ALE
Sbjct: 235 EYTDAYNNRGTAKYNLELYEDAIKDFDKAIELYPQYFYAYNNRGNAKSALGLYEDALEDF 294
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + I+ ++ AY+ R ++ + +G H +A+KD + +D +NI Y R Y+ + +
Sbjct: 295 SKSINIEPKYIDAYYNRAIVKNNMGLHNEAVKDYDIVIELDNNNINAYYNRGLSYYNLAD 354
Query: 635 YREAV 639
Y +A+
Sbjct: 355 YEKAL 359
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 1/230 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
G+ E ++ A +F + L+ED E G ++ E AI+ +++ I
Sbjct: 4 FEEGLQLFRETQFEKASELFIKALEEDCNNSEIYNYLGLSKQALGFFEEAINYYSKGIDI 63
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + GE + R LG AI+D K +E P + ++RG + A++
Sbjct: 64 DENYGELYYNRANCECNLGFYEAAIKDYDKVIELVPTHSRAYNDRGFAKGNLGLYEDALK 123
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D+ + LD N +Y +Y +A E + KA++LD + A+ + + +
Sbjct: 124 DIDKAIVLDSNNVDSYIDRAFIKLMSKKYIEAIEDYKKALELDDTEVYAYNGIGDAKRGM 183
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
E+A+ ++V+ + S AY+ G GLG +K AI D++ L I
Sbjct: 184 GLYEEAISYYKKVIELSNS-SYAYNNIGACKIGLGLYKDAIIDINKALEI 232
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
E G+ F+ F A E ++ D N Y YLGL+ ++G +++A + K I +D
Sbjct: 5 EEGLQLFRETQFEKASELFIKALEEDCNNSEIYNYLGLSKQALGFFEEAINYYSKGIDID 64
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
N+ E + + +L E A++ +V+ + S+AY+ RG LG ++ A+KD
Sbjct: 65 ENYGELYYNRANCECNLGFYEAAIKDYDKVIELVPTHSRAYNDRGFAKGNLGLYEDALKD 124
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + +D +N++ RA +Y EA+
Sbjct: 125 IDKAIVLDSNNVDSYIDRAFIKLMSKKYIEAI 156
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 105/216 (48%), Gaps = 7/216 (3%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + E A F +A++ + + E + G ++ ALG EAI SK ++ + N ++ +
Sbjct: 13 ETQFEKASELFIKALEEDCNNSEIYNYLGLSKQALGFFEEAINYYSKGIDIDENYGELYY 72
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
R + AA++D ++L + AY G A ++G Y+ A + KAI LD
Sbjct: 73 NRANCECNLGFYEAAIKDYDKVIELVPTHSRAYNDRGFAKGNLGLYEDALKDIDKAIVLD 132
Query: 548 RNFLEAWGHLTQFYQDLANSE--KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
N ++++ + + + L + + +A+E ++ L +D AY+ G G+G +++AI
Sbjct: 133 SNNVDSY--IDRAFIKLMSKKYIEAIEDYKKALELDDTEVYAYNGIGDAKRGMGLYEEAI 190
Query: 606 KDLSSGLGIDPSNIECLYLR-ASCYHAIGEYREAVI 640
I+ SN Y +C +G Y++A+I
Sbjct: 191 SYYKK--VIELSNSSYAYNNIGACKIGLGLYKDAII 224
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG---- 129
NR LEL++ I+D DKA++L P AY +G A SALG E+AL + K
Sbjct: 242 NRGTAKYNLELYEDAIKDFDKAIELYPQYFYAYNNRGNAKSALGLYEDALEDFSKSINIE 301
Query: 130 --YEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
Y A + A +K + L A +D + E D +N
Sbjct: 302 PKYIDAYYNRAIVKNNMGLH---NEAVKDYDIVIELDNNN 338
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 28/148 (18%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L ++SK+I I + Y NRA + + LH ++D D ++LD + AY
Sbjct: 290 ALEDFSKSINIEPKYIDAYY------NRAIVKNNMGLHNEAVKDYDIVIELDNNNINAYY 343
Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
+G ++ L E+AL D + +EL L A +R T
Sbjct: 344 NRGLSYYNLADYEKALK--------------DYDRVMELNPKLADAYNNRGFT------- 382
Query: 168 SMSSLTVSESGLNANDKMSETSENHNKS 195
S+ + E +N DK E N+ K+
Sbjct: 383 -KYSMGLYEEAINDYDKAIEIDANYEKA 409
>gi|225620520|ref|YP_002721777.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215339|gb|ACN84073.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 392
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 126/258 (48%), Gaps = 3/258 (1%)
Query: 386 SRGIAQVN---EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+R A+ N E Y SA+ + +K + + A RG E A+ DF + I
Sbjct: 45 NRANAKANIDDEASYKSAVEDYTWTIKLNDQFAAAYYNRGIINRSLGNTEEALKDFDKTI 104
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ N + E + R +A+L + +I+D +KA+E P+ AD + R + ++ A
Sbjct: 105 ELNYNLEEVYYVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEA 164
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
++D ++ + AY G +G + +A + + AI ++R F + + +
Sbjct: 165 IKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAIDDYTNAIHINREFADGYFNRANAKF 224
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+ + + A+E +++ I+ +++KAY RG++ + +++AIKD + ++P+ +
Sbjct: 225 HIKDYKGAVEDFDELIKINPKYTKAYLNRGIIAMTMEAYQEAIKDFDKVIELEPNLADAH 284
Query: 623 YLRASCYHAIGEYREAVI 640
Y +A + +G Y EA++
Sbjct: 285 YNKAVALNHLGIYDEAIL 302
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 5/222 (2%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +++ L R + + Y +I +++ ++ P + +A R ++ E
Sbjct: 102 KTIELNYNLEEVYYVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEY 161
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI D+ +AI+ N +A+ RG + LG EAI D + A+ AD R
Sbjct: 162 KEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAIDDYTNAIHINREFADGYFNRAN 221
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F KD+ AVED +K++ + AY G+ ++ Y++A + K I+L+ N
Sbjct: 222 AKFHIKDYKGAVEDFDELIKINPKYTKAYLNRGIIAMTMEAYQEAIKDFDKVIELEPNLA 281
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+A + L ++A+ + + ++ +S++Y RG+
Sbjct: 282 DAHYNKAVALNHLGIYDEAILYYNKAIELNPNYSESYFNRGI 323
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 111/252 (44%), Gaps = 38/252 (15%)
Query: 426 AFQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARA------------------------ 460
AF+ + + AI F+E I+ + + EA+ R A+A
Sbjct: 16 AFKSKNYKLAIEYFSEVIKLDSTIYEAYYNRANAKANIDDEASYKSAVEDYTWTIKLNDQ 75
Query: 461 -------------ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+LG + EA++D K +E N ++ + R KD+ ++ED +
Sbjct: 76 FAAAYYNRGIINRSLGNTEEALKDFDKTIELNYNLEEVYYVRANTKASLKDYKGSIEDYN 135
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+++ AY L+ +++GEYK+A + + KAI+ + +F++A+ + + L N
Sbjct: 136 KAIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNF 195
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+A++ ++I++ F+ Y R + +K A++D + I+P + R
Sbjct: 196 NEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKINPKYTKAYLNRGI 255
Query: 628 CYHAIGEYREAV 639
+ Y+EA+
Sbjct: 256 IAMTMEAYQEAI 267
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
SL N +A++ D + +Y ++++ RA + L+ +K I D +KA+++ P AY
Sbjct: 89 SLGNTEEALKDFDKTIELNYNLEEVYYVRANTKASLKDYKGSIEDYNKAIEVYPHFADAY 148
Query: 107 ILKGCAFSALGRKEEALSVWEKGYEHALH 135
+ + +ALG +EA+ ++K E+ H
Sbjct: 149 YNRALSKNALGEYKEAIKDYDKAIEYNSH 177
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 49 LRNWSKAIRILDSLLAQSYEI-QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++++ A+ D L+ + + + NR +E ++ I+D DK ++L+P L A+
Sbjct: 226 IKDYKGAVEDFDELIKINPKYTKAYLNRGIIAMTMEAYQEAIKDFDKVIELEPNLADAHY 285
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
K A + LG +EA+ + K E
Sbjct: 286 NKAVALNHLGIYDEAILYYNKAIE 309
>gi|225619724|ref|YP_002720981.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225214543|gb|ACN83277.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 424
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D + R ++ KY AI + ++L+ D A G G A+ E AIS +
Sbjct: 135 NIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSIGLYEEAISYYN 194
Query: 440 EAIQ-SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+ I+ SN ++ A+ RG + LG EAI D++KALE D + RG + +
Sbjct: 195 KVIEISNSNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDEYTDAYNNRGTAKYNLEL 254
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+ED ++L + AY G + S++G Y+ A E AI ++ +++A+ +
Sbjct: 255 YKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYEDAIEDFNIAINIEPKYIDAYYNRA 314
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++ +A++ V+ +D AY+ R L + L +++AIK+ + ++P +
Sbjct: 315 VAKNNMGLHNEAIKDYDIVIELDSNHINAYYNRALSYYNLSDYEEAIKNYDKVIELNPKS 374
Query: 619 IECLYLRASCYHAIGEYREAV 639
E R ++IG Y EA+
Sbjct: 375 AEAYNNRGFAKYSIGLYEEAL 395
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 1/253 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + G Y AI+ + + ++ D Y E R + EAAI+D+ + I+ P+
Sbjct: 41 GITKQALGFYEEAINYYSKGIEIDENYAELYYNRANCESNLGLYEAAINDYDKVIELVPT 100
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ RG A+ LG EAI+D+ KA+ + N+ D +R + K + A+ED
Sbjct: 101 HSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYK 160
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL-DRNFLEAWGHLTQFYQDLAN 566
++LD AY +G A SIG Y++A + K I++ + N A+ + L
Sbjct: 161 KVLELDDTEVYAYNGIGDAKRSIGLYEEAISYYNKVIEISNSNSSYAYNNRGACKIGLGL 220
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+ + + L I ++ AY+ RG + L +K+AI+D + + P R
Sbjct: 221 YNEAIIDINKALEIYDEYTDAYNNRGTAKYNLELYKEAIEDFDKAIELSPQYFYAYNNRG 280
Query: 627 SCYHAIGEYREAV 639
+ A+G Y +A+
Sbjct: 281 NSKSALGLYEDAI 293
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 132/304 (43%), Gaps = 40/304 (13%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK I +D +R + N G Y +AI+ +D++++ P + +A RG A+
Sbjct: 58 SKGIEIDENYAELYYNRANCESNLGLYEAAINDYDKVIELVPTHSKAYDDRGYAKGNLGY 117
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE----------- 479
E AI D +AI + + +A+ R + + +EAI+D K LE +
Sbjct: 118 YEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIG 177
Query: 480 ------------------------PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
NS+ + RG +N A+ D++ +++ E
Sbjct: 178 DAKRSIGLYEEAISYYNKVIEISNSNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDE 237
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
AY G A ++ YK+A E KAI+L + A+ + L E A+E
Sbjct: 238 YTDAYNNRGTAKYNLELYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYEDAIEDFN 297
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ I+ ++ AY+ R + + +G H +AIKD + +D ++I Y RA Y+ + +Y
Sbjct: 298 IAINIEPKYIDAYYNRAVAKNNMGLHNEAIKDYDIVIELDSNHINAYYNRALSYYNLSDY 357
Query: 636 REAV 639
EA+
Sbjct: 358 EEAI 361
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 2/218 (0%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V IS S S S + +RG ++ G Y AI ++ L+ Y +A RGTA+
Sbjct: 196 VIEISNSNS-SYAYN-NRGACKIGLGLYNEAIIDINKALEIYDEYTDAYNNRGTAKYNLE 253
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ AI DF +AI+ +P A+ RG +++ALG +AI+D + A+ EP D + R
Sbjct: 254 LYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYEDAIEDFNIAINIEPKYIDAYYNR 313
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ N A++D ++LD + +AY L+ ++ +Y++A + + K I+L+
Sbjct: 314 AVAKNNMGLHNEAIKDYDIVIELDSNHINAYYNRALSYYNLSDYEEAIKNYDKVIELNPK 373
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
EA+ + + E+AL+ + + ID + KA
Sbjct: 374 SAEAYNNRGFAKYSIGLYEEALKDYDKAIEIDSNYEKA 411
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 119/234 (50%), Gaps = 2/234 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
G A+ + G Y AIS ++++++ + A RG + AI D +A++
Sbjct: 177 GDAKRSIGLYEEAISYYNKVIEISNSNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYD 236
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG A+ L EAI+D KA+E P + RG + A+ED
Sbjct: 237 EYTDAYNNRGTAKYNLELYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYEDAIEDF 296
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ + AY +A +++G + +A + + I+LD N + A+ + Y +L++
Sbjct: 297 NIAINIEPKYIDAYYNRAVAKNNMGLHNEAIKDYDIVIELDSNHINAYYNRALSYYNLSD 356
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
E+A++ +V+ ++ + ++AY+ RG + +G +++A+KD + ID SN E
Sbjct: 357 YEEAIKNYDKVIELNPKSAEAYNNRGFAKYSIGLYEEALKDYDKAIEID-SNYE 409
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 5/216 (2%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + E A + F +A++ + + E + G + ALG EAI SK +E + N A++ +
Sbjct: 13 ETQFEKAAALFIKALEEDRNNSEIYNYLGITKQALGFYEEAINYYSKGIEIDENYAELYY 72
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
R + AA+ D ++L + AY G A ++G Y++A + KAI LD
Sbjct: 73 NRANCESNLGLYEAAINDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLD 132
Query: 548 RNFLEAWGHLTQFYQDLANSE--KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
N ++A+ + + + L + + +A+E ++VL +D AY+ G +G +++AI
Sbjct: 133 SNNIDAY--IDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSIGLYEEAI 190
Query: 606 KDLSSGLGIDPSNIECLY-LRASCYHAIGEYREAVI 640
+ + I SN Y R +C +G Y EA+I
Sbjct: 191 SYYNKVIEISNSNSSYAYNNRGACKIGLGLYNEAII 226
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
E G+ F+ F A ++ D+ N Y YLG+ ++G Y++A + K I++D
Sbjct: 5 EEGLQLFRETQFEKAAALFIKALEEDRNNSEIYNYLGITKQALGFYEEAINYYSKGIEID 64
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
N+ E + + +L E A+ +V+ + SKAY RG LG +++AIKD
Sbjct: 65 ENYAELYYNRANCESNLGLYEAAINDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIKD 124
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + +D +NI+ RA +Y EA+
Sbjct: 125 IDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAI 156
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ +SK I I D A+ Y NRA C S L L++ I D DK ++L PT +AY
Sbjct: 53 AINYYSKGIEI-DENYAELY-----YNRANCESNLGLYEAAINDYDKVIELVPTHSKAYD 106
Query: 108 LKGCAFSALGRKEEAL 123
+G A LG EEA+
Sbjct: 107 DRGYAKGNLGYYEEAI 122
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
NR LEL+K I D DKA++L P AY +G + SALG E+A+
Sbjct: 244 NRGTAKYNLELYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYEDAI 293
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 69 IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
I NRA Y L ++ I++ DK ++L+P +AY +G A ++G EEAL ++K
Sbjct: 341 INAYYNRALSYYNLSDYEEAIKNYDKVIELNPKSAEAYNNRGFAKYSIGLYEEALKDYDK 400
Query: 129 GYE 131
E
Sbjct: 401 AIE 403
>gi|296127389|ref|YP_003634641.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019205|gb|ADG72442.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 425
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 35/287 (12%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+++ G + AI+ +D+ ++ D Y E R + E A+ D+ + I+ P+
Sbjct: 42 GLSENALGNFEEAINYYDKAIETDENYAELYYNRANTKCNLGLYEEAVKDYDKVIELVPT 101
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ RG A+ LG EA++D+ KA+ + + D +R + K + A+ED
Sbjct: 102 HSKAYDDRGFAKGNLGYYEEALKDIDKAIILDSTNIDAYSDRAFIKLVSKKYYEAIEDYK 161
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ---------------------- 545
++LD ++ AY +G A SIG Y++A + KAI+
Sbjct: 162 KVLELDDKDVYAYNGIGDAKRSIGLYEEAIFYYNKAIEISPASSAYAYNNRGVCKIGLKL 221
Query: 546 -----LDRN-FLEAWGHLTQFYQ-------DLANSEKALECLQQVLYIDKRFSKAYHLRG 592
LD N LE + T Y +L E +++ + + ++ ++ AY+ RG
Sbjct: 222 YNEAILDINKSLEIYDEYTDAYNNRAIAKYNLGLYEDSIKDFDKAIELNAQYYYAYNNRG 281
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG +++AI D + L I+PS I+ Y RA + +G + AV
Sbjct: 282 NSKSALGLYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEYAV 328
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A+ N G Y A+ D+ + D +A R + ++ AI D+ + ++ +
Sbjct: 109 RGFAKGNLGYYEEALKDIDKAIILDSTNIDAYSDRAFIKLVSKKYYEAIEDYKKVLELDD 168
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-NSADILHERGIVNFKFKDFNAAVED 505
A+ G A+ ++G EAI +KA+E P +SA + RG+ K +N A+ D
Sbjct: 169 KDVYAYNGIGDAKRSIGLYEEAIFYYNKAIEISPASSAYAYNNRGVCKIGLKLYNEAILD 228
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ +++ E AY +A ++G Y+ + + KAI+L+ + A+ + L
Sbjct: 229 INKSLEIYDEYTDAYNNRAIAKYNLGLYEDSIKDFDKAIELNAQYYYAYNNRGNSKSALG 288
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ L I+ + AY+ R L + LG H+ A+KD D +NI+ Y +
Sbjct: 289 LYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEYAVKDYDIVTEFDNNNIDAYYNK 348
Query: 626 ASCYHAIGEYREAV 639
A Y+ + +Y+EA+
Sbjct: 349 ALSYYNLSDYKEAL 362
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
Query: 369 CVTRISKSKSIS---VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ I+KS I D +R IA+ N G Y +I FD+ ++ + Y A RG ++
Sbjct: 225 AILDINKSLEIYDEYTDAYNNRAIAKYNLGLYEDSIKDFDKAIELNAQYYYAYNNRGNSK 284
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ E AISDF A+ PS +A+ R A+ LG A++D EF+ N+ D
Sbjct: 285 SALGLYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEYAVKDYDIVTEFDNNNIDA 344
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ + + + D+ A+++ ++L+ ++ AY G +G Y++A + + KAI+
Sbjct: 345 YYNKALSYYNLSDYKEALKNYDKVIELNPQSADAYNNRGFTKYCMGLYQEALKDYDKAIE 404
Query: 546 LDRNF 550
++ ++
Sbjct: 405 INPDY 409
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 97/231 (41%), Gaps = 34/231 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++ Y AI ++ L+ Y +A R A+ E +I DF +AI+ N
Sbjct: 211 NRGVCKIGLKLYNEAILDINKSLEIYDEYTDAYNNRAIAKYNLGLYEDSIKDFDKAIELN 270
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG +++ALG EAI D AL EP+ D + R + AV+D
Sbjct: 271 AQYYYAYNNRGNSKSALGLYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEYAVKD 330
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ D N AY L+ ++ +YK+A L
Sbjct: 331 YDIVTEFDNNNIDAYYNKALSYYNLSDYKEA---------------------------LK 363
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
N +K +E Q + AY+ RG + +G +++A+KD + I+P
Sbjct: 364 NYDKVIELNPQS-------ADAYNNRGFTKYCMGLYQEALKDYDKAIEINP 407
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 19/160 (11%)
Query: 58 ILDSLLAQSYEIQD-----ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCA 112
ILD + +S EI D NRA L L++ I+D DKA++L+ AY +G +
Sbjct: 226 ILD--INKSLEIYDEYTDAYNNRAIAKYNLGLYEDSIKDFDKAIELNAQYYYAYNNRGNS 283
Query: 113 FSALGRKEEALSVW------EKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVS 166
SALG EEA+S + E Y A + A K L L E A +D + E+D +
Sbjct: 284 KSALGLYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEY---AVKDYDIVTEFDNN 340
Query: 167 NSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRD 206
N + + S N +D E +N++K + + + QS D
Sbjct: 341 NIDAYYNKALSYYNLSD-YKEALKNYDK--VIELNPQSAD 377
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFL-EAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
GL L GEYKKA E KA+ + N E + +L L N E+A+ + + D+
Sbjct: 7 GLKLFKEGEYKKAVELFNKALNKEENTKSEIYNYLGLSENALGNFEEAINYYDKAIETDE 66
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+++ Y+ R LG +++A+KD + + P++ + R +G Y EA+
Sbjct: 67 NYAELYYNRANTKCNLGLYEEAVKDYDKVIELVPTHSKAYDDRGFAKGNLGYYEEAL 123
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
+L N+ +AI D + ++ NRA L L++ ++D DK ++L PT +AY
Sbjct: 47 ALGNFEEAINYYDKAIETDENYAELYYNRANTKCNLGLYEEAVKDYDKVIELVPTHSKAY 106
Query: 107 ILKGCAFSALGRKEEAL 123
+G A LG EEAL
Sbjct: 107 DDRGFAKGNLGYYEEAL 123
>gi|434405193|ref|YP_007148078.1| putative low-complexity protein [Cylindrospermum stagnale PCC 7417]
gi|428259448|gb|AFZ25398.1| putative low-complexity protein [Cylindrospermum stagnale PCC 7417]
Length = 576
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 134/279 (48%), Gaps = 10/279 (3%)
Query: 316 ASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK 375
ASL +++ + SS+ DN +D+ + KW + + E K + I+
Sbjct: 264 ASLGNADLRGANLDASSLPDNIRADAGDYS-----KWGDNQYSKREYKSAIAYYNQAIAL 318
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+ + + SRG+A Y +A++ F++ ++ DP Y +A RG R Q++ + A+
Sbjct: 319 NPQDTQGY-TSRGLAFSQLKDYQAALADFNRAIEIDPNYAKAYNSRGLTRIEQQDYQNAL 377
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
DF +AI+ NP+ EA+ R R + I D S A+ + RG+ F
Sbjct: 378 VDFEQAIRLNPNYAEAYNGRATIRRIQKDYAAVIVDASLAIRINSKFGAAYNNRGLARFA 437
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+D+ A++D + + AY GLA +IGEYK A + +AI +D+N+++A+
Sbjct: 438 QQDYQGAIKDYDSAIGNSSNWAWAYFNRGLAKYTIGEYKDATGDYDRAIDIDQNYVDAYY 497
Query: 556 H--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
L +F + E A++ +V+ D + +AY +G
Sbjct: 498 QRSLARFAR--KKYEDAIKDCDRVIQKDPNYGEAYENQG 534
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
E AI ++A+ P RG+ + KD+ AA+ D + +++D AY
Sbjct: 304 EYKSAIAYYNQAIALNPQDTQGYTSRGLAFSQLKDYQAALADFNRAIEIDPNYAKAYNSR 363
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
GL +Y+ A +AI+L+ N+ EA+ + + + + I+ +
Sbjct: 364 GLTRIEQQDYQNALVDFEQAIRLNPNYAEAYNGRATIRRIQKDYAAVIVDASLAIRINSK 423
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAV 639
F AY+ RGL ++ AIKD S +G + SN Y R + IGEY++A
Sbjct: 424 FGAAYNNRGLARFAQQDYQGAIKDYDSAIG-NSSNWAWAYFNRGLAKYTIGEYKDAT 479
>gi|186684314|ref|YP_001867510.1| hypothetical protein Npun_R4192 [Nostoc punctiforme PCC 73102]
gi|186466766|gb|ACC82567.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 269
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 23/238 (9%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G N G Y AI + Q + ++ + + RG AR+ ++ + AI DF E I+ +
Sbjct: 12 SLGYILYNSGDYQGAIENYTQAILQNSEDLTSYLSRGVARSLTKDYQNAIEDFNETIRLS 71
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG ARAA+G++ AI+D ++A++ +P RG F ++ A+ED
Sbjct: 72 PQYAQAYAERGVARAAIGDNQSAIEDCNRAIQLDPQYVRAYFGRGAACFYSGNYQGALED 131
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----------- 554
S +++ S Y LG+ S G +A + KA+ +D N + A+
Sbjct: 132 FSLIASMERSAVSYYN-LGILQYSQGINSQAIKHLTKALYVDPNLIAAYYVRGNACYELG 190
Query: 555 ---GHLTQFYQDLANSEKALECLQQV-LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
G F N K +E + + +Y + F A++ RGL H LG ++AI D+
Sbjct: 191 DEQGAFADF-----NEAKHIEAVGRGEIYSEDEF--AFYARGLASHRLGNREEAIADI 241
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 10/172 (5%)
Query: 463 GESVEAIQDLSKALEFEPNSADILH--ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
G+ AI++ ++A+ NS D+ RG+ KD+ A+ED + ++L + AY
Sbjct: 21 GDYQGAIENYTQAIL--QNSEDLTSYLSRGVARSLTKDYQNAIEDFNETIRLSPQYAQAY 78
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALECLQQVL 578
G+A ++IG+ + A E +AIQLD ++ A+ FY N + ALE +
Sbjct: 79 AERGVARAAIGDNQSAIEDCNRAIQLDPQYVRAYFGRGAACFYS--GNYQGALEDFSLIA 136
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA-SCY 629
+++ Y+L G+L + G + +AIK L+ L +DP+ I Y+R +CY
Sbjct: 137 SMERSAVSYYNL-GILQYSQGINSQAIKHLTKALYVDPNLIAAYYVRGNACY 187
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 68/128 (53%), Gaps = 14/128 (10%)
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------GHLTQFYQDLANSEKALE 572
Y+ LG L + G+Y+ A E + +AI + L ++ LT+ YQ+ A+E
Sbjct: 9 GYSSLGYILYNSGDYQGAIENYTQAILQNSEDLTSYLSRGVARSLTKDYQN------AIE 62
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR-ASCYHA 631
+ + + ++++AY RG+ +G ++ AI+D + + +DP + + R A+C+++
Sbjct: 63 DFNETIRLSPQYAQAYAERGVARAAIGDNQSAIEDCNRAIQLDPQYVRAYFGRGAACFYS 122
Query: 632 IGEYREAV 639
G Y+ A+
Sbjct: 123 -GNYQGAL 129
>gi|434395410|ref|YP_007130357.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428267251|gb|AFZ33197.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 1022
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 124/255 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G A EG+Y AI+ ++Q L+ P P+ +G A ++ E+AI+ F + ++
Sbjct: 730 INQGNALFAEGRYQEAIATYEQALEIQPNNPDLCYQQGLALWELKQYESAIAAFDKVLEI 789
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +W RG A L A S+ ++ +P ++D RGIV + K + A+
Sbjct: 790 KPDDAASWYHRGLALKELKRYEGAFAAFSQVIQVQPENSDAWFNRGIVLSRMKRYKDAIA 849
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ + A+ G+AL + +++A ++ +A+Q+ + AW + + L
Sbjct: 850 SYDKAIEINPNHHLAWVDRGVALGKLQNHEEAFQSFDRAVQVKPDDAVAWMNRAMALEVL 909
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E A+ + + +D + KA++ +G LL L + +A++ L I P Y
Sbjct: 910 EKLEDAIASYDKAIELDPDYYKAWNAKGYLLVQLERDPEALESFDRALQIQPDYPNAYYN 969
Query: 625 RASCYHAIGEYREAV 639
+A CY G+ + A+
Sbjct: 970 KAICYAFQGQVKLAL 984
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A +Y SAI+ FD++L+ P + RG A + E A + F++ IQ P
Sbjct: 766 QGLALWELKQYESAIAAFDKVLEIKPDDAASWYHRGLALKELKRYEGAFAAFSQVIQVQP 825
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG + + +AI KA+E PN +RG+ K ++ A +
Sbjct: 826 ENSDAWFNRGIVLSRMKRYKDAIASYDKAIEINPNHHLAWVDRGVALGKLQNHEEAFQSF 885
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
V++ ++ A+ +AL + + + A ++ KAI+LD ++ +AW L
Sbjct: 886 DRAVQVKPDDAVAWMNRAMALEVLEKLEDAIASYDKAIELDPDYYKAWNAKGYLLVQLER 945
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ALE + L I + AY+ + + GQ K A+++L + ++P
Sbjct: 946 DPEALESFDRALQIQPDYPNAYYNKAICYAFQGQVKLALENLQKAIELNP 995
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RGI +Y AI+ +D+ ++ +P + A + RG A + E A F A
Sbjct: 829 DAWFNRGIVLSRMKRYKDAIASYDKAIEINPNHHLAWVDRGVALGKLQNHEEAFQSFDRA 888
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+Q P AW R A L + +AI KA+E +P+ + +G + + +
Sbjct: 889 VQVKPDDAVAWMNRAMALEVLEKLEDAIASYDKAIELDPDYYKAWNAKGYLLVQLERDPE 948
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A+E +++ + +AY + + G+ K A E KAI+L+ +
Sbjct: 949 ALESFDRALQIQPDYPNAYYNKAICYAFQGQVKLALENLQKAIELNPKY 997
>gi|300868979|ref|ZP_07113583.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300333046|emb|CBN58775.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 328
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 109/243 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG + AI+ FD+ L P Y EA RG A + E AI+ F +A+
Sbjct: 79 SRGNVLYRLRRLGEAIASFDKSLAIQPDYHEAWYNRGVALGKFGDFEDAIASFDKALAIQ 138
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG AI KAL +P+ + + RG+ K F A+
Sbjct: 139 PDYHEAWYNRGVALGKLGRFEGAIASYDKALVIKPDYHEAWYNRGMALGKLGQFEGAIAA 198
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L + A+ G+AL ++G ++ A ++ +AI+L + EAW + L
Sbjct: 199 YDKAIELKIDKHEAWNNRGIALKNLGRFEDAIASYDRAIELKIDKHEAWINRGIALNSLE 258
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E A+ + L I + +A++ RG+ L LG + AI L I P E + R
Sbjct: 259 RFEDAIASFDKALAIKPDYHEAWNNRGVALRQLGDLEGAIASFDKALVIKPDYQEAWHNR 318
Query: 626 ASC 628
+
Sbjct: 319 SMA 321
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 17/281 (6%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I DF + G A G+Y AI+ +D+ ++ P +A RG
Sbjct: 25 AIAFYKKAIGIQPDFYKVWYNWGEALYELGQYKEAIAAYDKGIEFKPDLYQAWYSRGNVL 84
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
R L AI+ F +++ P EAW RG A G+ +AI KAL +P+ +
Sbjct: 85 YRLRRLGEAIASFDKSLAIQPDYHEAWYNRGVALGKFGDFEDAIASFDKALAIQPDYHEA 144
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ K F A+ + + + A+ G+AL +G+++ A A+ KAI+
Sbjct: 145 WYNRGVALGKLGRFEGAIASYDKALVIKPDYHEAWYNRGMALGKLGQFEGAIAAYDKAIE 204
Query: 546 LDRNFLEAWG-------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
L + EAW +L +F +A+ ++A+E L IDK +A+ RG+ L+ L
Sbjct: 205 LKIDKHEAWNNRGIALKNLGRFEDAIASYDRAIE-----LKIDKH--EAWINRGIALNSL 257
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + AI L I P E R +G+ A+
Sbjct: 258 ERFEDAIASFDKALAIKPDYHEAWNNRGVALRQLGDLEGAI 298
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ KS +I D+ +RG+A G + AI+ FD+ L P Y EA RG A
Sbjct: 93 AIASFDKSLAIQPDYHEAWYNRGVALGKFGDFEDAIASFDKALAIQPDYHEAWYNRGVAL 152
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
E AI+ + +A+ P EAW RG A LG+ AI KA+E + + +
Sbjct: 153 GKLGRFEGAIASYDKALVIKPDYHEAWYNRGMALGKLGQFEGAIAAYDKAIELKIDKHEA 212
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RGI F A+ ++L + A+ G+AL+S+ ++ A + KA+
Sbjct: 213 WNNRGIALKNLGRFEDAIASYDRAIELKIDKHEAWINRGIALNSLERFEDAIASFDKALA 272
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
+ ++ EAW + + L + E A+ + L I + +A+H R + +
Sbjct: 273 IKPDYHEAWNNRGVALRQLGDLEGAIASFDKALVIKPDYQEAWHNRSMAI 322
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 14/228 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
SRG Q +G + AI+ + + + P + + G A + + AI+ + + I+
Sbjct: 10 FSRGYLQYEKGDFEGAIAFYKKAIGIQPDFYKVWYNWGEALYELGQYKEAIAAYDKGIEF 69
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AW RG L EAI K+L +P+ + + RG+ KF DF A+
Sbjct: 70 KPDLYQAWYSRGNVLYRLRRLGEAIASFDKSLAIQPDYHEAWYNRGVALGKFGDFEDAIA 129
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
+ + + A+ G+AL +G ++ A ++ KA+ + ++ EAW G L
Sbjct: 130 SFDKALAIQPDYHEAWYNRGVALGKLGRFEGAIASYDKALVIKPDYHEAWYNRGMALGKL 189
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
QF +A +KA+E L IDK +A++ RG+ L LG+ + AI
Sbjct: 190 GQFEGAIAAYDKAIE-----LKIDKH--EAWNNRGIALKNLGRFEDAI 230
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E RG + + + E AI+ + +AI P + W G+A LG+ EAI K
Sbjct: 7 EEWFSRGYLQYEKGDFEGAIAFYKKAIGIQPDFYKVWYNWGEALYELGQYKEAIAAYDKG 66
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+EF+P+ + RG V ++ + A+ + + + A+ G+AL G+++
Sbjct: 67 IEFKPDLYQAWYSRGNVLYRLRRLGEAIASFDKSLAIQPDYHEAWYNRGVALGKFGDFED 126
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + KA+ + ++ EAW + L E A+ + L I + +A++ RG+ L
Sbjct: 127 AIASFDKALAIQPDYHEAWYNRGVALGKLGRFEGAIASYDKALVIKPDYHEAWYNRGMAL 186
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LGQ + AI + + E R +G + +A+
Sbjct: 187 GKLGQFEGAIAAYDKAIELKIDKHEAWNNRGIALKNLGRFEDAI 230
>gi|392966968|ref|ZP_10332386.1| Tetratricopeptide repeat protein 6 Short=TPR repeat protein 6
[Fibrisoma limi BUZ 3]
gi|387843765|emb|CCH54434.1| Tetratricopeptide repeat protein 6 Short=TPR repeat protein 6
[Fibrisoma limi BUZ 3]
Length = 445
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 123/248 (49%), Gaps = 1/248 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N + AI +D+ ++ + A + RG +++ Q + A+ DF+ AI+ N
Sbjct: 65 NRGLAKANLKDHRGAILDYDRAIELNAKDALAYLSRGVSKSKQDDHRGALLDFSRAIELN 124
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG +R+ L + A+ D SK +E EPN+A L+ RGI K +D+ ++ D
Sbjct: 125 PDDPQTYYSRGVSRSRLEQHRGALADFSKTIELEPNNALALYARGITKQKLEDYAGSLAD 184
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++++ A+ G++ + +Y A AI+L E++ + L
Sbjct: 185 FSKVLEMNPRRAQAFAGRGVSKLELKDYTGAIADLNSAIELGPEDAESYYYRGFAKAKLD 244
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC-LYL 624
+ + AL + L ++ +AY+ RG LG K AI+D ++ + + SN + +Y
Sbjct: 245 DYKGALADYNRTLTLNGDNFRAYYGRGFCRSKLGDQKGAIQDFNTAIEANNSNTDAKVYY 304
Query: 625 RASCYHAI 632
AI
Sbjct: 305 NGKITRAI 312
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 128/285 (44%), Gaps = 36/285 (12%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+++ ++ A++ F + ++ +P AL RG + + +++DF++ ++ N
Sbjct: 133 SRGVSRSRLEQHRGALADFSKTIELEPNNALALYARGITKQKLEDYAGSLADFSKVLEMN 192
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG ++ L + AI DL+ A+E P A+ + RG K D+ A+ D
Sbjct: 193 PRRAQAFAGRGVSKLELKDYTGAIADLNSAIELGPEDAESYYYRGFAKAKLDDYKGALAD 252
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ---------------LDRNF 550
+ + L+ +N AY G S +G+ K A + AI+ + R
Sbjct: 253 YNRTLTLNGDNFRAYYGRGFCRSKLGDQKGAIQDFNTAIEANNSNTDAKVYYNGKITRAI 312
Query: 551 LEAWGHLTQ---------------FYQDLANSEK------ALECLQQVLYIDKRFSKAYH 589
L+ +L Q +Y + K A+ L + + + +++AY
Sbjct: 313 LDNLRNLVQERNKINDLSDERAEAYYSRAVSKNKQGDAKAAIVDLNKAIELSPTYAEAYF 372
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
G++ G K A+ DL+S + ++P E Y+R HA+G+
Sbjct: 373 TLGMIKSAQGDQKGAVMDLNSAIKLNPRYAEVYYVRGIIKHALGD 417
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 131/293 (44%), Gaps = 38/293 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSRG+++ + + A+ F + ++ +P P+ RG +R+ + A++DF++ I+
Sbjct: 98 LSRGVSKSKQDDHRGALLDFSRAIELNPDDPQTYYSRGVSRSRLEQHRGALADFSKTIEL 157
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ A RG + L + ++ D SK LE P A RG+ + KD+ A+
Sbjct: 158 EPNNALALYARGITKQKLEDYAGSLADFSKVLEMNPRRAQAFAGRGVSKLELKDYTGAIA 217
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---------- 554
DL++ ++L E+ +Y Y G A + + +YK A + + + L+ + A+
Sbjct: 218 DLNSAIELGPEDAESYYYRGFAKAKLDDYKGALADYNRTLTLNGDNFRAYYGRGFCRSKL 277
Query: 555 ----GHLTQF---------------YQDLANSEKALECLQQVL--------YIDKRFSKA 587
G + F Y + + L+ L+ ++ D+R ++A
Sbjct: 278 GDQKGAIQDFNTAIEANNSNTDAKVYYNGKITRAILDNLRNLVQERNKINDLSDER-AEA 336
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
Y+ R + + G K AI DL+ + + P+ E + A G+ + AV+
Sbjct: 337 YYSRAVSKNKQGDAKAAIVDLNKAIELSPTYAEAYFTLGMIKSAQGDQKGAVM 389
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 113/270 (41%), Gaps = 38/270 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + YA +++ F ++L+ +P +A GRG ++ ++ AI+D AI+
Sbjct: 167 ARGITKQKLEDYAGSLADFSKVLEMNPRRAQAFAGRGVSKLELKDYTGAIADLNSAIELG 226
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E++ RG A+A L + A+ D ++ L ++ + RG K D A++D
Sbjct: 227 PEDAESYYYRGFAKAKLDDYKGALADYNRTLTLNGDNFRAYYGRGFCRSKLGDQKGAIQD 286
Query: 506 LSACVKLDKENKSAYTYLGLALSSI----------------------------------- 530
+ ++ + N A Y ++
Sbjct: 287 FNTAIEANNSNTDAKVYYNGKITRAILDNLRNLVQERNKINDLSDERAEAYYSRAVSKNK 346
Query: 531 -GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
G+ K A KAI+L + EA+ L + + A+ L + ++ R+++ Y+
Sbjct: 347 QGDAKAAIVDLNKAIELSPTYAEAYFTLGMIKSAQGDQKGAVMDLNSAIKLNPRYAEVYY 406
Query: 590 LRGLLLHGLGQHKKAIKDLSSG--LGIDPS 617
+RG++ H LG DLS LG PS
Sbjct: 407 VRGIIKHALGDENGGCLDLSKAGELGYTPS 436
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 113/260 (43%), Gaps = 1/260 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ DF GI + G + A+ F + +P + RG A+A ++ AI D+
Sbjct: 26 AADF-FENGITRSKTGDFTGALQAFSMAITMNPENAASYYNRGLAKANLKDHRGAILDYD 84
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AI+ N A+ RG +++ + A+ D S+A+E P+ + RG+ + +
Sbjct: 85 RAIELNAKDALAYLSRGVSKSKQDDHRGALLDFSRAIELNPDDPQTYYSRGVSRSRLEQH 144
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D S ++L+ N A G+ + +Y + K ++++ +A+
Sbjct: 145 RGALADFSKTIELEPNNALALYARGITKQKLEDYAGSLADFSKVLEMNPRRAQAFAGRGV 204
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+L + A+ L + + +++Y+ RG L +K A+ D + L ++ N
Sbjct: 205 SKLELKDYTGAIADLNSAIELGPEDAESYYYRGFAKAKLDDYKGALADYNRTLTLNGDNF 264
Query: 620 ECLYLRASCYHAIGEYREAV 639
Y R C +G+ + A+
Sbjct: 265 RAYYGRGFCRSKLGDQKGAI 284
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
SA E GI K DF A++ S + ++ EN ++Y GLA +++ +++ A +
Sbjct: 25 SAADFFENGITRSKTGDFTGALQAFSMAITMNPENAASYYNRGLAKANLKDHRGAILDYD 84
Query: 542 KAIQLDRNFLEAWGHLTQFY----QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+AI+L N +A +L++ QD + AL + + ++ + Y+ RG+
Sbjct: 85 RAIEL--NAKDALAYLSRGVSKSKQD--DHRGALLDFSRAIELNPDDPQTYYSRGVSRSR 140
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
L QH+ A+ D S + ++P+N LY R + +Y
Sbjct: 141 LEQHRGALADFSKTIELEPNNALALYARGITKQKLEDY 178
>gi|254166562|ref|ZP_04873416.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|289596148|ref|YP_003482844.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
gi|197624172|gb|EDY36733.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|289533935|gb|ADD08282.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
Length = 1297
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 14/267 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ G+A G A+ + K DP A A Q+E + A +A+Q
Sbjct: 65 VNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAAYIIEKALQI 124
Query: 445 NPSAGEAWKRRGQARAALGESVEA--------------IQDLSKALEFEPNSADILHERG 490
+ + E W+ + + G+ EA I+ K LE+ P +IL ++G
Sbjct: 125 DRRSKEVWETKAEIYQLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPKDLEILFKKG 184
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ +K + + V+ + V ++ E++ A+ YLG A ++I ++A A KAI++D N
Sbjct: 185 VQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALKKAIKIDPND 244
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
++W +L Y+ E+AL+C ++ + ID K+++L +LH L + +A+K ++
Sbjct: 245 KKSWINLGILYKKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSINR 304
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYRE 637
L +D L LR + Y E
Sbjct: 305 ALELDKKYESALLLRRDVAKKLKVYDE 331
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 123/290 (42%), Gaps = 34/290 (11%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+L + I + +G++ ISI + ILK +P +L+ A +LE+A++ A
Sbjct: 384 LKLQKEIMK-KKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRAT 442
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQ----------------DLSKA----------- 475
+ PS E WK R L + E I DL++A
Sbjct: 443 EIEPSNIELWKLRKDIAKDLNKPQEIINAGTQIISMEGDFETYLDLARAYYIVSRYDDAK 502
Query: 476 ------LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
L+ +S + + G++ +K D A ++ NK + L +
Sbjct: 503 KTLERGLKLNEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPNNKKYWKNLAWVMEK 562
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+G+Y +A E + KA++LD N + W + + E+A++ L ++ F+KA +
Sbjct: 563 LGKYNEAVEYYEKALKLDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALY 622
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+G L LG + +A+K +S + ++ N E +Y RA EY A+
Sbjct: 623 EKGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAAL 672
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 387 RGIAQVNE--GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +A V E GKY A+ +++ LK DP +G + E AI F A++
Sbjct: 554 KNLAWVMEKLGKYNEAVEYYEKALKLDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALKL 613
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N +A +G + LG EA++ + ++ E +++ +++R + FK +++ AA++
Sbjct: 614 NSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAALK 673
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAE---EAHLKAIQLDRNFLEAWGHLTQFY 561
DL+ + +++ K +L L E K E E + + +++ + AW L Y
Sbjct: 674 DLNLALNYERKEK----FLVLKKDVCKELKDYECVIETSKEILTINKKNISAWRDLAVAY 729
Query: 562 QDLANSEKALECLQQVLYI 580
+ + A+ + L I
Sbjct: 730 DSMGKVDSAIATYRDALEI 748
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I N G+ + RR + + E++E I++ E E SA +L G+ K
Sbjct: 28 INKNNPEGKDYLRR--SINLINENLELIKN-----ENESFSA-LLVNTGMALQKVGAIKD 79
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E KLD N SAYT + L+ EYKKA KA+Q+DR E W + Y
Sbjct: 80 ALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAAYIIEKALQIDRRSKEVWETKAEIY 139
Query: 562 QDLANSEKALECLQQV--LYID--KRFSKAYHLR----------GLLLHGLGQHKKAIKD 607
Q + ++AL+ +++ +Y D K + K R G+ L+ + + + +K
Sbjct: 140 QLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPKDLEILFKKGVQLYKIQSYAECVKI 199
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + I+ + E + Y I REA+
Sbjct: 200 MKKVVSINAEHQEAWVYLGAAYANIDRMREAI 231
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 105/260 (40%), Gaps = 44/260 (16%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT------- 439
+G + + G Y A+ IF ++K + E + R R +RE EAA+ D
Sbjct: 624 KGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAALKDLNLALNYER 683
Query: 440 --------------------------EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
E + N AW+ A ++G+ AI
Sbjct: 684 KEKFLVLKKDVCKELKDYECVIETSKEILTINKKNISAWRDLAVAYDSMGKVDSAIATYR 743
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
ALE P++ +L+E K F A++ + + E+ L AL + +Y
Sbjct: 744 DALEIFPDNDVLLYELKATLLKHNRFADAIDVCKKILSIAPEDYDNLRDLSSALIKLKKY 803
Query: 534 KKAEEAHLKAIQLDRN--FLEAWGHLTQFYQDLANSEKALECLQQVL------YIDKRFS 585
+ A+E L+A++L++N LE G T +Y L N A+E + L +I + +
Sbjct: 804 EDAKEYLLRALELNKNAELLELLGD-TYYY--LKNYTSAIEHYKDALNLNASPHIYHKLA 860
Query: 586 KAYHLRGLLLHGLGQHKKAI 605
KAY+ G L + ++AI
Sbjct: 861 KAYYKVGDLQEAIKSIERAI 880
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 122/287 (42%), Gaps = 7/287 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPM 413
++K +E K K+ R K + + F+ +G+ YA + I +++ +
Sbjct: 155 LIKMYPDEIKYYDKYLEYR---PKDLEILFK--KGVQLYKIQSYAECVKIMKKVVSINAE 209
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ EA + G A A + AI+ +AI+ +P+ ++W G GE EA++
Sbjct: 210 HQEAWVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFK 269
Query: 474 KALEFEPNSADILH-ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+A++ +PN + E +++ +D + A++ ++ ++LDK+ +SA +
Sbjct: 270 EAIKIDPNDKKSWYLEASVLHILERD-SEALKSINRALELDKKYESALLLRRDVAKKLKV 328
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y + A + + + E L Y EKA +L R L+
Sbjct: 329 YDELAAACVGLLDVGYEDTELMYDLALSYYHTGELEKAYNITLDILKSLPRHLPTLKLQK 388
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ GQ ++ I L I+P++I L A Y +G+ A+
Sbjct: 389 EIMKKKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESAL 435
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D RL +GI +Y AI FD LK + + +AL +G + + A+ FT
Sbjct: 583 DMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALYEKGDSLIKLGNYDEALKIFT 642
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I+ E +R R E A++DL+ AL +E ++ ++ + + KD+
Sbjct: 643 SLIKLERGNSEYIYKRAYLRFKKREYEAALKDLNLALNYERKEKFLVLKKDVCK-ELKDY 701
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+E + ++K+N SA+ L +A S+G+ A + A+++
Sbjct: 702 ECVIETSKEILTINKKNISAWRDLAVAYDSMGKVDSAIATYRDALEI 748
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 113/280 (40%), Gaps = 43/280 (15%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
CV + K SI+ + + + G A N + AI+ + +K DP ++ I G
Sbjct: 196 CVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILY 255
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ E E A+ F EAI+ +P+ ++W L EA++ +++ALE +
Sbjct: 256 KKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSINRALELDKKYESA 315
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKL---DKENKSAYTYLGLALSSIGEYKKAEEA--- 539
L R V K K ++ E +ACV L E+ L L+ GE +KA
Sbjct: 316 LLLRRDVAKKLKVYD---ELAAACVGLLDVGYEDTELMYDLALSYYHTGELEKAYNITLD 372
Query: 540 -------HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR-------FS 585
HL ++L + ++ G E+ + + +L I+ +
Sbjct: 373 ILKSLPRHLPTLKLQKEIMKKKGQW----------ERVISICEDILKIEPNDIGSLVDEA 422
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
KAY G L L +A + I+PSNIE LR
Sbjct: 423 KAYREVGKLESALNFAIRATE-------IEPSNIELWKLR 455
>gi|186684246|ref|YP_001867442.1| hypothetical protein Npun_R4121 [Nostoc punctiforme PCC 73102]
gi|186466698|gb|ACC82499.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 1319
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%)
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
N + R S + + +G++Q G AI+ +D+ ++ P + E RG
Sbjct: 396 NSPGIIERHSNNPITNAQGWFYQGLSQAKTGDLLGAIASYDRAIELQPEFSEYWFNRGLI 455
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
E AI+ + AI+ P +AW RG LG EAI KA+E +P+ +
Sbjct: 456 LFHLERFEEAIASYETAIELKPDFYKAWYNRGGTLGELGYFEEAIASFDKAIEVKPDYQE 515
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+G+ K A+ + L+ E++ + + G+AL+ ++ +A ++ KA+
Sbjct: 516 AWSSKGLALLKLGWLPEAIYSYDQALHLEPEDQENWYHRGIALAVGEQFAEAIISYDKAL 575
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+++ + E W +L +A+ + L + F A++ RG+ L LG+ ++A
Sbjct: 576 EINPEYHEVWIDRGVVLFNLGRWSEAIASWDKALSVQADFYLAWYNRGIALDNLGRRQEA 635
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I + I P Y +A + ++ EA+
Sbjct: 636 IASYRQAIAIKPDFHLAWYNQAVALFYLEQFAEAI 670
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 5/220 (2%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + AI+ FD+ ++ P Y EA +G A L AI + +A+ P E W
Sbjct: 494 GYFEEAIASFDKAIEVKPDYQEAWSSKGLALLKLGWLPEAIYSYDQALHLEPEDQENWYH 553
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A A + EAI KALE P ++ +RG+V F ++ A+ + +
Sbjct: 554 RGIALAVGEQFAEAIISYDKALEINPEYHEVWIDRGVVLFNLGRWSEAIASWDKALSVQA 613
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALE 572
+ A+ G+AL ++G ++A ++ +AI + +F AW + + FY L +A+
Sbjct: 614 DFYLAWYNRGIALDNLGRRQEAIASYRQAIAIKPDFHLAWYNQAVALFY--LEQFAEAIA 671
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
C L I + + +A+ RG + L + A+ +LSS +
Sbjct: 672 CYDNALEIKQDYWEAWIGRGTAIGNL-VNSDALLNLSSNI 710
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+A + G AI +DQ L +P E RG A A + AI + +A++ N
Sbjct: 519 SKGLALLKLGWLPEAIYSYDQALHLEPEDQENWYHRGIALAVGEQFAEAIISYDKALEIN 578
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W RG LG EAI KAL + + + RGI A+
Sbjct: 579 PEYHEVWIDRGVVLFNLGRWSEAIASWDKALSVQADFYLAWYNRGIALDNLGRRQEAIAS 638
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + + A+ +AL + ++ +A + A+++ +++ EAW
Sbjct: 639 YRQAIAIKPDFHLAWYNQAVALFYLEQFAEAIACYDNALEIKQDYWEAW 687
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 51/206 (24%)
Query: 444 SNP-SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+NP + + W +G ++A G+ + AI +A+E +P ++ RG++ F + F A
Sbjct: 406 NNPITNAQGWFYQGLSQAKTGDLLGAIASYDRAIELQPEFSEYWFNRGLILFHLERFEEA 465
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------G 555
I Y+ A I+L +F +AW G
Sbjct: 466 ---------------------------IASYETA-------IELKPDFYKAWYNRGGTLG 491
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
L F + +A+ +KA+E + + +A+ +GL L LG +AI L ++
Sbjct: 492 ELGYFEEAIASFDKAIE-------VKPDYQEAWSSKGLALLKLGWLPEAIYSYDQALHLE 544
Query: 616 PSNIECLYLRASCYHAIGE-YREAVI 640
P + E Y R A+GE + EA+I
Sbjct: 545 PEDQENWYHRGIAL-AVGEQFAEAII 569
>gi|428772227|ref|YP_007164015.1| serine/threonine protein kinase [Cyanobacterium stanieri PCC 7202]
gi|428686506|gb|AFZ46366.1| serine/threonine protein kinase [Cyanobacterium stanieri PCC 7202]
Length = 697
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 119/237 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD +RGI+ G+Y AI+ +++I++ DP Y A RG A F E E AI+D+ +
Sbjct: 446 VDAYNNRGISYHALGEYEKAIADYERIMELDPRYMRAYYNRGNAYKFLGEYERAIADYRQ 505
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+ +P+ A+ G LGE +AI + + + + + + RGI N+ D+
Sbjct: 506 AVNLDPTYTHAYYNLGNTYRDLGEEEKAIIEYDIVIALDNSYKNAHYNRGIANYNLGDYE 565
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
++ D + + LD E+ +A G + ++ Y +A + + I+LD ++ A+ +
Sbjct: 566 ESIRDNTEVLTLDAEDTNALINRGNSYFNLELYDQAMADYNRVIELDPDYQIAYYNRGNV 625
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
Y+ N ++A+ Q+ L ++ +++ L +G ++AI+ + ++P+
Sbjct: 626 YRVRENYQRAIADYQKSLDLNPNHLDSHNNMALSYEKMGNIQRAIEGYQRAIALNPN 682
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 115/247 (46%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
+ G Y AI + L++DP Y +A RG + E E AI+D+ ++ +P A+
Sbjct: 424 DRGSYDVAIIHYSSALRQDPNYVDAYNNRGISYHALGEYEKAIADYERIMELDPRYMRAY 483
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG A LGE AI D +A+ +P + G + A+ + + L
Sbjct: 484 YNRGNAYKFLGEYERAIADYRQAVNLDPTYTHAYYNLGNTYRDLGEEEKAIIEYDIVIAL 543
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
D K+A+ G+A ++G+Y+++ + + + LD A + Y +L ++A+
Sbjct: 544 DNSYKNAHYNRGIANYNLGDYEESIRDNTEVLTLDAEDTNALINRGNSYFNLELYDQAMA 603
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+V+ +D + AY+ RG + +++AI D L ++P++++ A Y +
Sbjct: 604 DYNRVIELDPDYQIAYYNRGNVYRVRENYQRAIADYQKSLDLNPNHLDSHNNMALSYEKM 663
Query: 633 GEYREAV 639
G + A+
Sbjct: 664 GNIQRAI 670
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 133/331 (40%), Gaps = 52/331 (15%)
Query: 361 EAKRNKKF-----CVTRISKSKSI----SVDFRLSRGIAQVNEGKYASAISIFDQILKED 411
E++ NK+F + + K + + S D RG + Y +A+ F +++ D
Sbjct: 272 ESRINKRFQTVDEVLEALDKVEDVVAQSSADLYFERGNYYLELQDYKNALDCFQNVIRID 331
Query: 412 PMYPEALIGRGTARAFQRELE---------------------AAISDFTEAIQS------ 444
P Y A R A +L+ AI+ + S
Sbjct: 332 PSYGFAYQRRDFAHQQLAKLDRKGNLSWRLKKVLQLSPFVAFGAIALYALLPTSGRMVDV 391
Query: 445 -NPSAGEA---------------WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
NP E+ + G G AI S AL +PN D +
Sbjct: 392 VNPVEAESVEVNSRDFSDLLPSRYYELGNRAYDRGSYDVAIIHYSSALRQDPNYVDAYNN 451
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RGI ++ A+ D ++LD AY G A +GEY++A + +A+ LD
Sbjct: 452 RGISYHALGEYEKAIADYERIMELDPRYMRAYYNRGNAYKFLGEYERAIADYRQAVNLDP 511
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A+ +L Y+DL EKA+ V+ +D + A++ RG+ + LG ++++I+D
Sbjct: 512 TYTHAYYNLGNTYRDLGEEEKAIIEYDIVIALDNSYKNAHYNRGIANYNLGDYEESIRDN 571
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ L +D + L R + Y + Y +A+
Sbjct: 572 TEVLTLDAEDTNALINRGNSYFNLELYDQAM 602
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 13/231 (5%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG---QARAALGESVEAIQDLSKALE 477
RG ++ + A+ F I+ +PS G A++RR Q A L L K L+
Sbjct: 307 RGNYYLELQDYKNALDCFQNVIRIDPSYGFAYQRRDFAHQQLAKLDRKGNLSWRLKKVLQ 366
Query: 478 FEPN---SADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN-----KSAYTYLGLALSS 529
P A L+ + + D VE + V+++ + S Y LG
Sbjct: 367 LSPFVAFGAIALYALLPTSGRMVDVVNPVE--AESVEVNSRDFSDLLPSRYYELGNRAYD 424
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
G Y A + A++ D N+++A+ + Y L EKA+ ++++ +D R+ +AY+
Sbjct: 425 RGSYDVAIIHYSSALRQDPNYVDAYNNRGISYHALGEYEKAIADYERIMELDPRYMRAYY 484
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
RG LG++++AI D + +DP+ Y + Y +GE +A+I
Sbjct: 485 NRGNAYKFLGEYERAIADYRQAVNLDPTYTHAYYNLGNTYRDLGEEEKAII 535
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ AI +D ++ D Y A RG A + E +I D TE + + A
Sbjct: 528 GEEEKAIIEYDIVIALDNSYKNAHYNRGIANYNLGDYEESIRDNTEVLTLDAEDTNALIN 587
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + L +A+ D ++ +E +P+ + RG V +++ A+ D + L+
Sbjct: 588 RGNSYFNLELYDQAMADYNRVIELDPDYQIAYYNRGNVYRVRENYQRAIADYQKSLDLNP 647
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
+ ++ + L+ +G ++A E + +AI L+ N+ A +L +
Sbjct: 648 NHLDSHNNMALSYEKMGNIQRAIEGYQRAIALNPNYQLAIDNLNRL 693
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG---- 129
NR Y L ++ I D ++ ++LDP ++AY +G A+ LG E A++ + +
Sbjct: 451 NRGISYHALGEYEKAIADYERIMELDPRYMRAYYNRGNAYKFLGEYERAIADYRQAVNLD 510
Query: 130 --YEHALHQSADLKQFLELEE 148
Y HA + + + L EE
Sbjct: 511 PTYTHAYYNLGNTYRDLGEEE 531
>gi|386810943|ref|ZP_10098169.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386405667|dbj|GAB61050.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 560
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 108/244 (44%), Gaps = 4/244 (1%)
Query: 395 GKYASAISI----FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
GK S +SI + + L D + + R + Q +E A+ D AI+ + +
Sbjct: 214 GKRISQMSIKKGYYLKNLTMDEVIANIYLNRSIIQKEQGNIENALKDVNRAIELHKNDAV 273
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ RG G AI D +K+++ P+ A + RG + + A+ D S V
Sbjct: 274 AYCNRGVIYEKTGNVEHAIYDYNKSIDLNPDYAPAYYNRGSLYASMEKLEKAIIDYSMAV 333
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
LD + +Y G+A +G + E K I LD F A+ H Y + SEKA
Sbjct: 334 SLDPNSILSYYNRGIAFKMVGRVDLSIEDLSKVISLDHTFAVAYAHRGLAYAESGESEKA 393
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
+ + L ID ++ Y RG+L L AIKDL++ + P+N Y+RA Y
Sbjct: 394 MADFNKALEIDPNHAETYMKRGILHADLQHFDDAIKDLTTFIQCVPNNAFAYYIRAKAYR 453
Query: 631 AIGE 634
GE
Sbjct: 454 GKGE 457
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 131/295 (44%), Gaps = 34/295 (11%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+ + L+R I Q +G +A+ ++ ++ A RG +E AI D+
Sbjct: 236 VIANIYLNRSIIQKEQGNIENALKDVNRAIELHKNDAVAYCNRGVIYEKTGNVEHAIYDY 295
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
++I NP A+ RG A++ + +AI D S A+ +PNS + RGI
Sbjct: 296 NKSIDLNPDYAPAYYNRGSLYASMEKLEKAIIDYSMAVSLDPNSILSYYNRGIAFKMVGR 355
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN--------- 549
+ ++EDLS + LD AY + GLA + GE +KA KA+++D N
Sbjct: 356 VDLSIEDLSKVISLDHTFAVAYAHRGLAYAESGESEKAMADFNKALEIDPNHAETYMKRG 415
Query: 550 --------FLEAWGHLTQFYQDLANS-----------------EKALECLQQVLYIDKRF 584
F +A LT F Q + N+ EK++ +V+ ++ R
Sbjct: 416 ILHADLQHFDDAIKDLTTFIQCVPNNAFAYYIRAKAYRGKGEIEKSMADYDRVIELNPRM 475
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ Y+ RG + + L + ++A+ D S+ L + P N R + + +GE + A+
Sbjct: 476 AGVYYERGQIKNQLEKSREALMDFSTSLELFPYNPLAYLHRGNTFKKLGEMKNAL 530
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 5/179 (2%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK IS+D + RG+A G+ A++ F++ L+ DP + E + RG A +
Sbjct: 364 SKVISLDHTFAVAYAHRGLAYAESGESEKAMADFNKALEIDPNHAETYMKRGILHADLQH 423
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI D T IQ P+ A+ R +A GE +++ D + +E P A + +ERG
Sbjct: 424 FDDAIKDLTTFIQCVPNNAFAYYIRAKAYRGKGEIEKSMADYDRVIELNPRMAGVYYERG 483
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + + A+ D S ++L N AY + G +GE K A + ++L+ N
Sbjct: 484 QIKNQLEKSREALMDFSTSLELFPYNPLAYLHRGNTFKKLGEMKNALRDYSVYLKLNPN 542
>gi|425441210|ref|ZP_18821493.1| TPR repeat:TPR repeat [Microcystis aeruginosa PCC 9717]
gi|389718158|emb|CCH97859.1| TPR repeat:TPR repeat [Microcystis aeruginosa PCC 9717]
Length = 506
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 22/320 (6%)
Query: 275 RQSSDDFDICNG----PIDKASVNERHGRQT---NGTHDVHDKLSSDSASLNDSNTNSES 327
R++SD FD +G P DK + ER R+ +G D + + + +
Sbjct: 173 RRASDFFDWYSGVYEFPTDK-DILEREIRRLVYLDGDLDTYQQFTPQQRQEKLAEI---- 227
Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR--- 384
K+ +SD+ S D ++ S+L K ++ + E ++ + K+ I D+
Sbjct: 228 --KAYLSDSPSLDPVQT-SELWHKKGLIHQMGKEYEQ----AIASYDKALEIKPDYHEAW 280
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A N G+ AI+ +DQ L+ P Y EA RG A E AI+ + A++
Sbjct: 281 YNRGVALGNLGRLEEAIASYDQALEFKPDYHEAWNNRGIALRNLGRFEQAIASYDRALEF 340
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P EAW RG A LG +AI +ALEF+P+ + + RGI A+
Sbjct: 341 KPDKHEAWNNRGNALFNLGRFEQAIASYDQALEFKPDYHEAWYNRGIALGNLGRLAEAIA 400
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++ + A+ G AL ++G ++A ++ +A++++ N+ + + Y
Sbjct: 401 SYDRALEFKPDFHEAWYNRGNALGNLGRLEQAIASYDRALEINSNYANTYYNKACCYGLQ 460
Query: 565 ANSEKALECLQQVLYIDKRF 584
N E A+E LQ+ + +D ++
Sbjct: 461 NNVELAIENLQRAINLDVKY 480
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 2/230 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ +Y AI+ +D+ L+ P Y EA RG A LE AI+ + +A++ P
Sbjct: 249 KGLIHQMGKEYEQAIASYDKALEIKPDYHEAWYNRGVALGNLGRLEEAIASYDQALEFKP 308
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG A LG +AI +ALEF+P+ + + RG F F A+
Sbjct: 309 DYHEAWNNRGIALRNLGRFEQAIASYDRALEFKPDKHEAWNNRGNALFNLGRFEQAIASY 368
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + A+ G+AL ++G +A ++ +A++ +F EAW + +L
Sbjct: 369 DQALEFKPDYHEAWYNRGIALGNLGRLAEAIASYDRALEFKPDFHEAWYNRGNALGNLGR 428
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK-AIKDLSSGLGID 615
E+A+ + L I+ ++ Y+ + +GL + + AI++L + +D
Sbjct: 429 LEQAIASYDRALEINSNYANTYYNKA-CCYGLQNNVELAIENLQRAINLD 477
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 14/216 (6%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G +E E AI+ + +A++ P EAW RG A LG EAI +ALEF+P
Sbjct: 249 KGLIHQMGKEYEQAIASYDKALEIKPDYHEAWYNRGVALGNLGRLEEAIASYDQALEFKP 308
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + + RGI F A+ ++ + A+ G AL ++G +++A ++
Sbjct: 309 DYHEAWNNRGIALRNLGRFEQAIASYDRALEFKPDKHEAWNNRGNALFNLGRFEQAIASY 368
Query: 541 LKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+A++ ++ EAW G+L + + +A+ ++ALE F +A++ RG
Sbjct: 369 DQALEFKPDYHEAWYNRGIALGNLGRLAEAIASYDRALE-------FKPDFHEAWYNRGN 421
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
L LG+ ++AI L I+ + Y +A CY
Sbjct: 422 ALGNLGRLEQAIASYDRALEINSNYANTYYNKACCY 457
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G+ A AI+ +D+ L+ P + EA RG A LE AI+ + A++ N
Sbjct: 384 NRGIALGNLGRLAEAIASYDRALEFKPDFHEAWYNRGNALGNLGRLEQAIASYDRALEIN 443
Query: 446 PSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADI 485
+ + + L +VE AI++L +A+ + D+
Sbjct: 444 SNYANTYYNKACC-YGLQNNVELAIENLQRAINLDVKYQDM 483
>gi|409994020|ref|ZP_11277142.1| hypothetical protein APPUASWS_22928 [Arthrospira platensis str.
Paraca]
gi|409935094|gb|EKN76636.1| hypothetical protein APPUASWS_22928 [Arthrospira platensis str.
Paraca]
Length = 636
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%)
Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
K SN + S+ + D L +G A +NE +Y AI+ D+ L+ +P
Sbjct: 248 KSPSNHDNHELRLPPKHPPTSQPLIADDFLKKGEALINERQYKQAIASCDRALEINPDLD 307
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA +G A ++ A+ + ++ P +AW RG L +A+ ++A
Sbjct: 308 EAWYQKGNALVQLKQYSEALECYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQA 367
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L+ +PN H RG + KF+ + A+E +KL+ + + G LS + Y++
Sbjct: 368 LKIQPNDYAAWHNRGALLRKFQKYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQE 427
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A ++ +AIQ++ + W + + +AL C +Q + ++ + + + +G +L
Sbjct: 428 AISSYDRAIQINPGQFDIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVL 487
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L +H++A+ + + + E R A+ +Y +A+
Sbjct: 488 VKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQAL 531
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 2/272 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT-ARAF 427
C R K + D +RG V +Y+ A+S ++Q LK P A RG R F
Sbjct: 329 CYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRGALLRKF 388
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q+ E A+ + AI+ + E W RG + L EAI +A++ P DI
Sbjct: 389 QK-YEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 447
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ ++ A+ + L+ + + G L + +++A + +AI L
Sbjct: 448 NRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLK 507
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ EAW + L E+AL +V+ + +A+ RG+ L L +H AI
Sbjct: 508 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDDAIAC 567
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + + P + E R + + +Y+EA+
Sbjct: 568 FDTAIALKPDHAESWRHRGALLSRLKKYQEAI 599
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 108/229 (47%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P+ + + +G A +R+ + AI+ A++ NP EAW ++G A L + EA++
Sbjct: 270 PLIADDFLKKGEALINERQYKQAIASCDRALEINPDLDEAWYQKGNALVQLKQYSEALEC 329
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ L+ +P +D + RG V + K ++ A+ + +K+ + +A+ G L
Sbjct: 330 YDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRGALLRKFQ 389
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+Y++A E++ +AI+L+ N E W + L ++A+ + + I+ + R
Sbjct: 390 KYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 449
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
G+ L + Q+ +A+ + ++ E + + + EAVI
Sbjct: 450 GMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVI 498
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ +D+ +K + + E RG + + + AIS + AIQ NP + W R
Sbjct: 390 KYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 449
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + + EA+ +A+ ++ +G V K AV + L +
Sbjct: 450 GMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSD 509
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G L+++ +Y++A + I L + +AW + L + A+ C
Sbjct: 510 SYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDDAIACFD 569
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + ++++ RG LL L ++++AI L + I
Sbjct: 570 TAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISI 608
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A + +Y+ A+S ++Q + + PE I +G E A+ + A
Sbjct: 444 DIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRA 503
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I + EAW RG+ AL + +A+ + + + +P++ +RGI K + +
Sbjct: 504 ISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDD 563
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A+ + L ++ ++ + G LS + +Y++A + KAI + +
Sbjct: 564 AIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKEL 612
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AIS +D+ ++ +P + RG A + A+S + +AI N E W +
Sbjct: 424 RYQEAISSYDRAIQINPGQFDIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQ 483
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +A+ + +S + RG + K + A+ + + L +
Sbjct: 484 GGVLVKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPD 543
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L + + A AI L + E+W H L ++A+ L
Sbjct: 544 AYQAWCQRGICLEKLERHDDAIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLG 603
Query: 576 QVLYIDKRF 584
+ + I K
Sbjct: 604 KAISIQKEL 612
>gi|427716718|ref|YP_007064712.1| hypothetical protein Cal7507_1412 [Calothrix sp. PCC 7507]
gi|427349154|gb|AFY31878.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 1313
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ Q G AI+ +DQ ++ P E RG + AI+ + +A+ P
Sbjct: 414 QGLQQARSGDLLGAIAFYDQAIELKPHSDEYWFNRGLTLFHLEQFTEAIASYDQAVALKP 473
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG LG+ AI +A+ +P+S++ +G+ K A+
Sbjct: 474 DFYKAWYNRGGILGELGQFEAAIASFEQAIIIKPDSSESWASKGLALLKLGQLWEAIAAY 533
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L E++ + Y G+AL+ ++++A ++ KA+++ ++ E W +L
Sbjct: 534 DQALVLQPEDQENWYYRGIALAVSEQHEEAIASYDKALEIQPDYHEVWIDRGVVLFNLKR 593
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+ L I F A++ RG+ L LGQ ++AI + I P Y +A
Sbjct: 594 WSEAIASWDHALSIQADFYLAWYNRGIALDNLGQREEAIDSYRKAIAIKPDFHLAWYNQA 653
Query: 627 SCYHAIGEYREAV 639
+G + EA+
Sbjct: 654 VALFYLGRFAEAI 666
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 7/186 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ +AI+ F+Q + P E+ +G A +L AI+ + +A+ P E W
Sbjct: 490 GQFEAAIASFEQAIIIKPDSSESWASKGLALLKLGQLWEAIAAYDQALVLQPEDQENWYY 549
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A A + EAI KALE +P+ ++ +RG+V F K ++ A+ + +
Sbjct: 550 RGIALAVSEQHEEAIASYDKALEIQPDYHEVWIDRGVVLFNLKRWSEAIASWDHALSIQA 609
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANS 567
+ A+ G+AL ++G+ ++A +++ KAI + +F AW +L +F + +A+
Sbjct: 610 DFYLAWYNRGIALDNLGQREEAIDSYRKAIAIKPDFHLAWYNQAVALFYLGRFAEAIASY 669
Query: 568 EKALEC 573
++AL+
Sbjct: 670 DRALQI 675
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+A + G+ AI+ +DQ L P E RG A A + E AI+ + +A++
Sbjct: 515 SKGLALLKLGQLWEAIAAYDQALVLQPEDQENWYYRGIALAVSEQHEEAIASYDKALEIQ 574
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W RG L EAI AL + + + RGI A++
Sbjct: 575 PDYHEVWIDRGVVLFNLKRWSEAIASWDHALSIQADFYLAWYNRGIALDNLGQREEAIDS 634
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + + A+ +AL +G + +A ++ +A+Q+ ++ EAW
Sbjct: 635 YRKAIAIKPDFHLAWYNQAVALFYLGRFAEAIASYDRALQIKLDYWEAW 683
>gi|164687574|ref|ZP_02211602.1| hypothetical protein CLOBAR_01215 [Clostridium bartlettii DSM
16795]
gi|164603348|gb|EDQ96813.1| tetratricopeptide repeat protein [Clostridium bartlettii DSM 16795]
Length = 523
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 102/174 (58%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
E + ++K +E + AD + RG KF+ F +A++D ++LDK K AY G+
Sbjct: 100 EKMAYVNKIIEKYDDCADGYYYRGDFYIKFEKFYSAIKDFEKVIQLDKNYKEAYRGKGVC 159
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
S +G+ A + + KA+Q+D N+ A+ +L Y +L +KA+E ++ L +D+
Sbjct: 160 YSRLGDNDLAIKNYEKALQIDPNYEVAYYNLGVSYSNLKEYDKAMESYRKALELDENDVS 219
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
AY+ RG +L LG++K+A+KD ++ + ++ + LY RA ++ + +Y++A++
Sbjct: 220 AYYNRGRILAYLGRYKEALKDFTNAINLEKYDERLLYERAGIFYLMKKYKDALL 273
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 3/292 (1%)
Query: 343 ESRSKLSFKWDMLKETSNEAKRNKKFC-VTRISKSKSISVDFRLSRGIAQVNEGKYASAI 401
E + +F DML + E + N+K V +I + D RG + K+ SAI
Sbjct: 77 EDLERKTFIQDMLNHANMEFEINEKMAYVNKIIEKYDDCADGYYYRGDFYIKFEKFYSAI 136
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
F+++++ D Y EA G+G + + + AI ++ +A+Q +P+ A+ G + +
Sbjct: 137 KDFEKVIQLDKNYKEAYRGKGVCYSRLGDNDLAIKNYEKALQIDPNYEVAYYNLGVSYSN 196
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK-ENKSAY 520
L E +A++ KALE + N + RG + + A++D + + L+K + + Y
Sbjct: 197 LKEYDKAMESYRKALELDENDVSAYYNRGRILAYLGRYKEALKDFTNAINLEKYDERLLY 256
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G+ + +YK A + + L + E + + Y + A+E + + I
Sbjct: 257 ERAGI-FYLMKKYKDALLDYKAFVNLAPHMKEGYLGMADCYCQMNQMNNAIEYYNKSIEI 315
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
D + ++Y R + +KAIKDL +G++P N E Y RA Y I
Sbjct: 316 DPNYEESYFNRSVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYYNRALAYGRI 367
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 107/244 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ + + P E +G ++ AI + ++I+ +P+ E++ R
Sbjct: 267 KYKDALLDYKAFVNLAPHMKEGYLGMADCYCQMNQMNNAIEYYNKSIEIDPNYEESYFNR 326
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A + +AI+DL K + P + + + R + + ++ + D S +K+ +
Sbjct: 327 SVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYYNRALAYGRIENHTKVIRDFSKAIKMGYK 386
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+Y G S G +KKA++ + ++I+ + + DL +A+
Sbjct: 387 VGKSYCNRGKEYSLTGNFKKAKDDYTRSIEHGYDSYIVYMGRGAANLDLEEYNEAILDFN 446
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + +D Y+ RGL + L Q+K+AI D S + PS+I R Y IG+Y
Sbjct: 447 KAIELDNTKLGNYYYRGLAYYNLKQYKEAIDDFSVAIEGCPSDIRAYEKRGDAYCRIGDY 506
Query: 636 REAV 639
A+
Sbjct: 507 DNAI 510
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 5/175 (2%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+KSI +D +R +A + + AI D+++ +P EA R A
Sbjct: 310 NKSIEIDPNYEESYFNRSVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYYNRALAYGRIEN 369
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
I DF++AI+ G+++ RG+ + G +A D ++++E +S + RG
Sbjct: 370 HTKVIRDFSKAIKMGYKVGKSYCNRGKEYSLTGNFKKAKDDYTRSIEHGYDSYIVYMGRG 429
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
N +++N A+ D + ++LD Y Y GLA ++ +YK+A + AI+
Sbjct: 430 AANLDLEEYNEAILDFNKAIELDNTKLGNYYYRGLAYYNLKQYKEAIDDFSVAIE 484
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 34/232 (14%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKET-------------SNEAKR 364
+N N E Y+KS D +S +RS K D L++ + EA
Sbjct: 299 MNQMNNAIEYYNKSIEIDPNYEESYFNRSVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYY 358
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
N+ RI + DF + AI + ++ K + RG
Sbjct: 359 NRALAYGRIENHTKVIRDF--------------SKAIKMGYKVGK-------SYCNRGKE 397
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ + A D+T +I+ + + RG A L E EAI D +KA+E +
Sbjct: 398 YSLTGNFKKAKDDYTRSIEHGYDSYIVYMGRGAANLDLEEYNEAILDFNKAIELDNTKLG 457
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ RG+ + K + A++D S ++ + AY G A IG+Y A
Sbjct: 458 NYYYRGLAYYNLKQYKEAIDDFSVAIEGCPSDIRAYEKRGDAYCRIGDYDNA 509
>gi|291569669|dbj|BAI91941.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 636
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 124/261 (47%), Gaps = 1/261 (0%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I+ DF L +G A +NE +Y AI+ D+ L+ +P EA +G A ++ A+ +
Sbjct: 272 IADDF-LKKGEALINERQYKQAIASCDRALEINPDLDEAWYQKGNALVQLKQYSEALECY 330
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
++ P +AW RG L +A+ ++AL+ +PN H RG + KF+
Sbjct: 331 DRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRGALLRKFQK 390
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+E +KL+ + + G LS + Y++A ++ +AIQ++ + W +
Sbjct: 391 YEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRG 450
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ +AL C +Q + ++ + + + +G +L L +H++A+ + + +
Sbjct: 451 MALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSDS 510
Query: 619 IECLYLRASCYHAIGEYREAV 639
E R A+ +Y +A+
Sbjct: 511 YEAWMGRGEILTALKQYEQAL 531
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 2/272 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT-ARAF 427
C R K + D +RG V +Y+ A+S ++Q LK P A RG R F
Sbjct: 329 CYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRGALLRKF 388
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q+ E A+ + AI+ + E W RG + L EAI +A++ P DI
Sbjct: 389 QK-YEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 447
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ ++ A+ + L+ + + G L + +++A + +AI L
Sbjct: 448 NRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLK 507
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ EAW + L E+AL +V+ + +A+ RG+ L L +H AI
Sbjct: 508 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDDAIAC 567
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + + P + E R + + +Y+EA+
Sbjct: 568 FDTAIALKPDHAESWRHRGALLSRLKKYQEAI 599
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 108/229 (47%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P+ + + +G A +R+ + AI+ A++ NP EAW ++G A L + EA++
Sbjct: 270 PLIADDFLKKGEALINERQYKQAIASCDRALEINPDLDEAWYQKGNALVQLKQYSEALEC 329
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ L+ +P +D + RG V + K ++ A+ + +K+ + +A+ G L
Sbjct: 330 YDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRGALLRKFQ 389
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+Y++A E++ +AI+L+ N E W + L ++A+ + + I+ + R
Sbjct: 390 KYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 449
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
G+ L + Q+ +A+ + ++ E + + + EAVI
Sbjct: 450 GMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVI 498
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ +D+ +K + + E RG + + + AIS + AIQ NP + W R
Sbjct: 390 KYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 449
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + + EA+ +A+ ++ +G V K AV + L +
Sbjct: 450 GMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSD 509
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G L+++ +Y++A + I L + +AW + L + A+ C
Sbjct: 510 SYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDDAIACFD 569
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + ++++ RG LL L ++++AI L + I
Sbjct: 570 TAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISI 608
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A + +Y+ A+S ++Q + + PE I +G E A+ + A
Sbjct: 444 DIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRA 503
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I + EAW RG+ AL + +A+ + + + +P++ +RGI K + +
Sbjct: 504 ISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDD 563
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A+ + L ++ ++ + G LS + +Y++A + KAI + +
Sbjct: 564 AIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKEL 612
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 77/189 (40%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AIS +D+ ++ +P + RG A + A+S + +AI N E W +
Sbjct: 424 RYQEAISSYDRAIQINPGQFDIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQ 483
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +A+ + +S + RG + K + A+ + + L +
Sbjct: 484 GGVLVKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPD 543
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L + + A AI L + E+W H L ++A+ L
Sbjct: 544 AYQAWCQRGICLEKLERHDDAIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLG 603
Query: 576 QVLYIDKRF 584
+ + I K
Sbjct: 604 KAISIQKEL 612
>gi|166363119|ref|YP_001655392.1| hypothetical protein MAE_03780 [Microcystis aeruginosa NIES-843]
gi|166085492|dbj|BAG00200.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
Length = 1379
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 121/246 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + KY A++ + + L+ +P EA +GRG+ + Q++ E A++D+++A++
Sbjct: 976 LGRGGIYSLQQKYELALADYSKALEINPNLAEAYLGRGSIYSLQQKYELALADYSKALEI 1035
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ EA+ RG + A+ D +KALE PN A RG + + K + A+
Sbjct: 1036 NPNLAEAYLGRGGIYLLQQKYELALADFNKALEINPNYAMAYFGRGELYYYQKKYELALA 1095
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + ++ +AY G + +Y+ A KAI+LD A+ + Y D
Sbjct: 1096 DYNKAIDINPNYANAYNNRGSIYYNQQKYELALADWNKAIELDSKLAMAYSNRGNIYNDQ 1155
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E AL + + +D + + AY RG L + +++ A+ D + L I+P+ E
Sbjct: 1156 QKYELALADFNKAIELDSKLAMAYSNRGNLYYLQQKYELALADYNKALDINPNLAEAYLG 1215
Query: 625 RASCYH 630
R Y+
Sbjct: 1216 RGGIYY 1221
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 129/262 (49%), Gaps = 7/262 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + KY A++ + + L+ +P EA +GRG Q++ E A++DF +A++
Sbjct: 1010 LGRGSIYSLQQKYELALADYSKALEINPNLAEAYLGRGGIYLLQQKYELALADFNKALEI 1069
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG+ + A+ D +KA++ PN A+ + RG + + + + A+
Sbjct: 1070 NPNYAMAYFGRGELYYYQKKYELALADYNKAIDINPNYANAYNNRGSIYYNQQKYELALA 1129
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD + AY+ G + +Y+ A KAI+LD A+ + Y
Sbjct: 1130 DWNKAIELDSKLAMAYSNRGNIYNDQQKYELALADFNKAIELDSKLAMAYSNRGNLYYLQ 1189
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E AL + L I+ ++AY RG + + + + A+ D + + I+P+ +E
Sbjct: 1190 QKYELALADYNKALDINPNLAEAYLGRGGIYYYQQKDELALADFNKAIEINPNLVEAYNN 1249
Query: 625 RASCYH-------AIGEYREAV 639
R + Y+ A+ +Y +A+
Sbjct: 1250 RGNLYYLQQKYELALSDYNKAI 1271
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 118/247 (47%), Gaps = 7/247 (2%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+S + + + +P Y A RG Q++ + A+SD+++AI NP+ E + RG
Sbjct: 855 ALSDYTKAIDINPNYAVAYNNRGLLYFNQKKYDLALSDYSKAIDINPNYAETYNNRGNLY 914
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L + A+ D SKA++ PN A + RG++ + + A+ D + ++L++ A
Sbjct: 915 KDLQKYDLALSDYSKAIDINPNYAVAYNNRGLLYLLQQKYELALADWNKAIELNRNLALA 974
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G S +Y+ A + KA++++ N EA+ Y E AL + L
Sbjct: 975 YLGRGGIYSLQQKYELALADYSKALEINPNLAEAYLGRGSIYSLQQKYELALADYSKALE 1034
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH-------AI 632
I+ ++AY RG + +++ A+ D + L I+P+ + R Y+ A+
Sbjct: 1035 INPNLAEAYLGRGGIYLLQQKYELALADFNKALEINPNYAMAYFGRGELYYYQKKYELAL 1094
Query: 633 GEYREAV 639
+Y +A+
Sbjct: 1095 ADYNKAI 1101
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 25/276 (9%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N KY A+S +++ +K +P Y A RG + Q++ E A++D+++AI N
Sbjct: 693 NRGNLYYNLQKYDLALSDWNKAIKINPNYANAYNNRGNLYSDQKKYELALADYSKAIDIN 752
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG L + A+ D SKA++ PN A + RG + + ++ A+ D
Sbjct: 753 PNDAVAYYNRGNLYYNLQKYDLALSDYSKAIDINPNDAKAYYNRGNLYSDLQKYDLALSD 812
Query: 506 LSACVKLDKENKSAYTYLG----------LALSSIGEYKKAEEA-----HLKAIQLDRNF 550
S + ++ Y G LALS +Y KA + + KAI ++ N+
Sbjct: 813 YSKAIDINPNYAETYNNRGNLYKDLQKYDLALS---DYTKAIDILALSDYTKAIDINPNY 869
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + Y + + AL + + I+ +++ Y+ RG L L ++ A+ D S
Sbjct: 870 AVAYNNRGLLYFNQKKYDLALSDYSKAIDINPNYAETYNNRGNLYKDLQKYDLALSDYSK 929
Query: 611 GLGIDP------SNIECLYLRASCYH-AIGEYREAV 639
+ I+P +N LYL Y A+ ++ +A+
Sbjct: 930 AIDINPNYAVAYNNRGLLYLLQQKYELALADWNKAI 965
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 124/263 (47%), Gaps = 7/263 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + + KY A++ F++ L+ +P Y A GRG +Q++ E A++D+ +AI
Sbjct: 1044 LGRGGIYLLQQKYELALADFNKALEINPNYAMAYFGRGELYYYQKKYELALADYNKAIDI 1103
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG + A+ D +KA+E + A RG + + + A+
Sbjct: 1104 NPNYANAYNNRGSIYYNQQKYELALADWNKAIELDSKLAMAYSNRGNIYNDQQKYELALA 1163
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD + AY+ G +Y+ A + KA+ ++ N EA+ Y
Sbjct: 1164 DFNKAIELDSKLAMAYSNRGNLYYLQQKYELALADYNKALDINPNLAEAYLGRGGIYYYQ 1223
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL-- 622
E AL + + I+ +AY+ RG L + +++ A+ D + + I+ + +
Sbjct: 1224 QKDELALADFNKAIEINPNLVEAYNNRGNLYYLQQKYELALSDYNKAIKINKNAWFAMMG 1283
Query: 623 -----YLRASCYHAIGEYREAVI 640
Y + S AI ++ +A+I
Sbjct: 1284 IGLVKYEQGSISEAIKQWEKALI 1306
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
+K+ + +K+I +D +L+ RG ++ KY A++ F++ ++ D A
Sbjct: 1122 QKYELALADWNKAIELDSKLAMAYSNRGNIYNDQQKYELALADFNKAIELDSKLAMAYSN 1181
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG Q++ E A++D+ +A+ NP+ EA+ RG + A+ D +KA+E P
Sbjct: 1182 RGNLYYLQQKYELALADYNKALDINPNLAEAYLGRGGIYYYQQKDELALADFNKAIEINP 1241
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N + + RG + + + + A+ D + +K++K A +GL G +A +
Sbjct: 1242 NLVEAYNNRGNLYYLQQKYELALSDYNKAIKINKNAWFAMMGIGLVKYEQGSISEAIKQW 1301
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
KA+ ++ E L + +KAL+ + L I+ + + L+ +L
Sbjct: 1302 EKALIINNQSAEIQLALAVAFYHQGEKDKALKLAESALSINSQLANIDFLKKIL 1355
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 12/231 (5%)
Query: 419 IGRGTARAFQRELEAAISDFTEAI-QSNP-SAGEAWKRRGQARAALGESVEAIQDLSKAL 476
I RG E AI F EAI Q++P + AW +G A LG+ AI+ L +A+
Sbjct: 548 IQRGGQLWRLERYEEAIKAFDEAIKQNDPKNVYLAWYGKGLALGYLGKYQTAIEALQQAI 607
Query: 477 EFEPNSAD-------ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
P D IL ++ +V +++ A+ ++ + L N + Y + LS
Sbjct: 608 NTLPKREDLKNFHSSILQKQSVVYRYLENYEQALTVINQAISLFPNNPNHYNEKYVVLSQ 667
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ Y + A +AI L AW G+ Y +L + AL + + I+ ++ AY
Sbjct: 668 LKRYDEGLAAITQAIDLAPR--AAWYGNRGNLYYNLQKYDLALSDWNKAIKINPNYANAY 725
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ RG L +++ A+ D S + I+P++ Y R + Y+ + +Y A+
Sbjct: 726 NNRGNLYSDQKKYELALADYSKAIDINPNDAVAYYNRGNLYYNLQKYDLAL 776
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 105/220 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+S + + + +P Y A RG Q++ E A++D+ +AI+ N + A+ R
Sbjct: 919 KYDLALSDYSKAIDINPNYAVAYNNRGLLYLLQQKYELALADWNKAIELNRNLALAYLGR 978
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + + A+ D SKALE PN A+ RG + + + A+ D S ++++
Sbjct: 979 GGIYSLQQKYELALADYSKALEINPNLAEAYLGRGSIYSLQQKYELALADYSKALEINPN 1038
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
AY G +Y+ A KA++++ N+ A+ + Y E AL
Sbjct: 1039 LAEAYLGRGGIYLLQQKYELALADFNKALEINPNYAMAYFGRGELYYYQKKYELALADYN 1098
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ + I+ ++ AY+ RG + + +++ A+ D + + +D
Sbjct: 1099 KAIDINPNYANAYNNRGSIYYNQQKYELALADWNKAIELD 1138
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
+L +W+KAI L+ LA +Y R YS + ++ + D KAL+++P L +AY
Sbjct: 956 LALADWNKAIE-LNRNLALAY-----LGRGGIYSLQQKYELALADYSKALEINPNLAEAY 1009
Query: 107 ILKGCAFSALGRKEEALSVWEKGYE 131
+ +G +S + E AL+ + K E
Sbjct: 1010 LGRGSIYSLQQKYELALADYSKALE 1034
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 19/130 (14%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITAR---------IELAKLCSLRNWSKAIRILDS 61
Y K + + ++ + +DS +A A + R ELA L +++KAI LDS
Sbjct: 1119 YNQQKYELALADWNKAIELDSKLAMAYSNRGNIYNDQQKYELA----LADFNKAIE-LDS 1173
Query: 62 LLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
LA +Y NR Y + ++ + D +KAL ++P L +AY+ +G + + E
Sbjct: 1174 KLAMAY-----SNRGNLYYLQQKYELALADYNKALDINPNLAEAYLGRGGIYYYQQKDEL 1228
Query: 122 ALSVWEKGYE 131
AL+ + K E
Sbjct: 1229 ALADFNKAIE 1238
>gi|328542500|ref|YP_004302609.1| O-linked GlcNAc transferase [Polymorphum gilvum SL003B-26A1]
gi|326412247|gb|ADZ69310.1| Probable O-linked GlcNAc transferase protein [Polymorphum gilvum
SL003B-26A1]
Length = 273
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + + G+ +AI+ +D+ L+ P Y AL+GRG + A+ DF I+ N
Sbjct: 96 NRALVERRRGQMQNAIADYDRALRVKPDYDVALVGRGNTYRQLGQYAQALRDFDTVIRRN 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S A+ RG A G AI+D + A+ PN+A+ RGI D NAA+ D
Sbjct: 156 SSDARAFHNRGLIYQAQGLHAFAIEDFATAIGLNPNAAEPYIARGISYLAINDPNAALSD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
LS V LDK + SA+ G+AL +G+ A+ + +AI LD
Sbjct: 216 LSDAVNLDKNSASAWANRGIALEMLGKKNDAQRNYNRAIGLD 257
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ ++ +P +A RG A L+ A+ DF A++ +PS+ +A+ R
Sbjct: 43 IASLTAVITANPADAQAYNTRGIAYGRAGRLDKALEDFNTALRLDPSSYQAYANRALVER 102
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
G+ AI D +AL +P+ L RG + + A+ D ++ + + A+
Sbjct: 103 RRGQMQNAIADYDRALRVKPDYDVALVGRGNTYRQLGQYAQALRDFDTVIRRNSSDARAF 162
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL + G + A E AI L+ N E + Y + + AL L + +
Sbjct: 163 HNRGLIYQAQGLHAFAIEDFATAIGLNPNAAEPYIARGISYLAINDPNAALSDLSDAVNL 222
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
DK + A+ RG+ L LG+ A ++ + +G+D SN+
Sbjct: 223 DKNSASAWANRGIALEMLGKKNDAQRNYNRAIGLDGSNV 261
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I L+ + P A + RGI + + A+ED + ++LD + AY L
Sbjct: 43 IASLTAVITANPADAQAYNTRGIAYGRAGRLDKALEDFNTALRLDPSSYQAYANRALVER 102
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
G+ + A + +A+++ ++ A Y+ L +AL V+ + ++A+
Sbjct: 103 RRGQMQNAIADYDRALRVKPDYDVALVGRGNTYRQLGQYAQALRDFDTVIRRNSSDARAF 162
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
H RGL+ G H AI+D ++ +G++P+ E R Y AI + A+
Sbjct: 163 HNRGLIYQAQGLHAFAIEDFATAIGLNPNAAEPYIARGISYLAINDPNAAL 213
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG G+YA A+ FD +++ + A RG Q AI DF AI
Sbjct: 129 VGRGNTYRQLGQYAQALRDFDTVIRRNSSDARAFHNRGLIYQAQGLHAFAIEDFATAIGL 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+A E + RG + A+ + A+ DLS A+ + NSA RGI N A
Sbjct: 189 NPNAAEPYIARGISYLAINDPNAALSDLSDAVNLDKNSASAWANRGIALEMLGKKNDAQR 248
Query: 505 DLSACVKLDKENKSA 519
+ + + LD N A
Sbjct: 249 NYNRAIGLDGSNVVA 263
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQ-SYEIQ 70
R + I + D +RV A+ R + L +++A+R D+++ + S + +
Sbjct: 103 RRGQMQNAIADYDRALRVKPDYDVALVGRGNTYR--QLGQYAQALRDFDTVIRRNSSDAR 160
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NR Y LH I D A+ L+P + YI +G ++ A+ ALS
Sbjct: 161 AFHNRGLIYQAQGLHAFAIEDFATAIGLNPNAAEPYIARGISYLAINDPNAALS 214
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 61/140 (43%)
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+A + L+A + + + AY G+A G KA E A++LD + +A+ +
Sbjct: 40 DANIASLTAVITANPADAQAYNTRGIAYGRAGRLDKALEDFNTALRLDPSSYQAYANRAL 99
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ + A+ + L + + A RG LGQ+ +A++D + + + S+
Sbjct: 100 VERRRGQMQNAIADYDRALRVKPDYDVALVGRGNTYRQLGQYAQALRDFDTVIRRNSSDA 159
Query: 620 ECLYLRASCYHAIGEYREAV 639
+ R Y A G + A+
Sbjct: 160 RAFHNRGLIYQAQGLHAFAI 179
>gi|414075842|ref|YP_006995160.1| hypothetical protein ANA_C10547 [Anabaena sp. 90]
gi|413969258|gb|AFW93347.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 404
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 117/227 (51%), Gaps = 3/227 (1%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E + +G + +R+ + AI+ TEAI+ +P EA+ RRG A + + + +AI DL K+
Sbjct: 146 EEFLKQGNDKLDKRDSQGAINTLTEAIRLDPKFAEAYSRRGVAYSNIENNQKAIDDLQKS 205
Query: 476 LEF---EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
++ + N++ H++G + KD+ A+ + + LD + Y G+A S+G+
Sbjct: 206 VKLFATQGNNSASKHDQGRIRDYLKDYQGAIALYNESINLDPHDARTYQNRGIAHYSLGD 265
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ A +AI+++ NF A+ DL + + A+ Q + I+ F+ AY RG
Sbjct: 266 KQAAIADFNQAIKINPNFAIAYHQRGNSRSDLGDKQAAIADFNQAIKINPNFAIAYKNRG 325
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + LG + AI D + + I+P + ++ ++ +G+ + A+
Sbjct: 326 YIHYELGDKQAAIADYTQAIKINPKYSKAYHVLGYIHYDLGDKQAAI 372
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 81/150 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA + G +AI+ F+Q +K +P + A RG +R+ + +AAI+DF +AI+ N
Sbjct: 255 NRGIAHYSLGDKQAAIADFNQAIKINPNFAIAYHQRGNSRSDLGDKQAAIADFNQAIKIN 314
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+K RG LG+ AI D ++A++ P + H G +++ D AA+ D
Sbjct: 315 PNFAIAYKNRGYIHYELGDKQAAIADYTQAIKINPKYSKAYHVLGYIHYDLGDKQAAIAD 374
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKK 535
VKL ++ K L +A I E +K
Sbjct: 375 FQQAVKLYQQQKGNEELLKIAQDRIRELQK 404
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 82/150 (54%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+++++ + DP RG A + +AAI+DF +AI+ NP+ A+ +RG
Sbjct: 232 YQGAIALYNESINLDPHDARTYQNRGIAHYSLGDKQAAIADFNQAIKINPNFAIAYHQRG 291
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+R+ LG+ AI D ++A++ PN A RG ++++ D AA+ D + +K++ +
Sbjct: 292 NSRSDLGDKQAAIADFNQAIKINPNFAIAYKNRGYIHYELGDKQAAIADYTQAIKINPKY 351
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
AY LG +G+ + A +A++L
Sbjct: 352 SKAYHVLGYIHYDLGDKQAAIADFQQAVKL 381
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G R + ++ + AI+ + E+I +P ++ RG A +LG+ AI D ++A++ P
Sbjct: 222 QGRIRDYLKDYQGAIALYNESINLDPHDARTYQNRGIAHYSLGDKQAAIADFNQAIKINP 281
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A H+RG D AA+ D + +K++ AY G +G+ + A +
Sbjct: 282 NFAIAYHQRGNSRSDLGDKQAAIADFNQAIKINPNFAIAYKNRGYIHYELGDKQAAIADY 341
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
+AI+++ + +A+ L + DL + + A+ QQ +
Sbjct: 342 TQAIKINPKYSKAYHVLGYIHYDLGDKQAAIADFQQAV 379
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 45/203 (22%)
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
KA EF D L +R D A+ L+ ++LD + AY+ G+A S+I
Sbjct: 144 KAEEFLKQGNDKLDKR--------DSQGAINTLTEAIRLDPKFAEAYSRRGVAYSNIENN 195
Query: 534 KKAEEAHLKAIQL----------------DRNFLEAW--------------GHLTQFYQD 563
+KA + K+++L R++L+ + H + YQ+
Sbjct: 196 QKAIDDLQKSVKLFATQGNNSASKHDQGRIRDYLKDYQGAIALYNESINLDPHDARTYQN 255
Query: 564 -------LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
L + + A+ Q + I+ F+ AYH RG LG + AI D + + I+P
Sbjct: 256 RGIAHYSLGDKQAAIADFNQAIKINPNFAIAYHQRGNSRSDLGDKQAAIADFNQAIKINP 315
Query: 617 SNIECLYLRASCYHAIGEYREAV 639
+ R ++ +G+ + A+
Sbjct: 316 NFAIAYKNRGYIHYELGDKQAAI 338
>gi|376005819|ref|ZP_09783211.1| hypothetical protein (secreted) [Arthrospira sp. PCC 8005]
gi|375325809|emb|CCE18964.1| hypothetical protein (secreted) [Arthrospira sp. PCC 8005]
Length = 631
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 124/261 (47%), Gaps = 1/261 (0%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I+ DF L +G A +NE +Y AI+ D+ L+ +P EA +G A ++ A+ +
Sbjct: 267 IADDF-LKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALECY 325
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
A++ P +AW RG L A++ ++AL+ EPN + H RG + KF+
Sbjct: 326 DRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNRALKIEPNDYAVWHNRGALLRKFQK 385
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+E + L+ + + G LS + Y++A ++ +AIQ++ + W +
Sbjct: 386 YEQALESYDRAIMLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRG 445
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ +AL C +Q + ++ + + + +G +L L ++++A+ + +
Sbjct: 446 MALCHIHQYSEALSCYEQAISLNSKDPELWISQGGVLVKLARYEEALICYDRAISFKSDS 505
Query: 619 IECLYLRASCYHAIGEYREAV 639
E R A+ +Y +A+
Sbjct: 506 YEAWMGRGEILTALKQYEQAL 526
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 2/272 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAF 427
C R K + D +RG V +Y+ A+ +++ LK +P RG R F
Sbjct: 324 CYDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNRALKIEPNDYAVWHNRGALLRKF 383
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q+ E A+ + AI + E W RG + L EAI +A++ P DI
Sbjct: 384 QK-YEQALESYDRAIMLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 442
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG+ ++ A+ + L+ ++ + G L + Y++A + +AI
Sbjct: 443 NRGMALCHIHQYSEALSCYEQAISLNSKDPELWISQGGVLVKLARYEEALICYDRAISFK 502
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ EAW + L E+AL +V+ + +A+ RG+ L + QH AI
Sbjct: 503 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIAC 562
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + + P + E R + + +Y+EA+
Sbjct: 563 FDTAIALKPDHAESWRHRGALLSRLKKYQEAI 594
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 110/229 (48%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P+ + + +G A +R+ + AI+ A++ NP EAW ++G A L + +A++
Sbjct: 265 PLIADDFLKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALEC 324
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+AL+ +P +D + RG V + K ++ A+E + +K++ + + + G L
Sbjct: 325 YDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNRALKIEPNDYAVWHNRGALLRKFQ 384
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+Y++A E++ +AI L+ N E W + L ++A+ + + I+ + R
Sbjct: 385 KYEQALESYDRAIMLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 444
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
G+ L + Q+ +A+ + ++ + E + + Y EA+I
Sbjct: 445 GMALCHIHQYSEALSCYEQAISLNSKDPELWISQGGVLVKLARYEEALI 493
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 95/219 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ +D+ + + + E RG + + + AIS + AIQ NP + W R
Sbjct: 385 KYEQALESYDRAIMLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANR 444
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A + + EA+ +A+ ++ +G V K + A+ + +
Sbjct: 445 GMALCHIHQYSEALSCYEQAISLNSKDPELWISQGGVLVKLARYEEALICYDRAISFKSD 504
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G L+++ +Y++A + I L + +AW + + + A+ C
Sbjct: 505 SYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIACFD 564
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + ++++ RG LL L ++++AI L + I
Sbjct: 565 TAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISI 603
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG+A + +Y+ A+S ++Q + + PE I +G E A+ + A
Sbjct: 439 DIWANRGMALCHIHQYSEALSCYEQAISLNSKDPELWISQGGVLVKLARYEEALICYDRA 498
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I + EAW RG+ AL + +A+ + + + +P++ +RGI K + +
Sbjct: 499 ISFKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDD 558
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
A+ + L ++ ++ + G LS + +Y++A + KAI + ++
Sbjct: 559 AIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKDL 607
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AIS +D+ ++ +P + RG A + A+S + +AI N E W +
Sbjct: 419 RYQEAISSYDRAIQINPGQFDIWANRGMALCHIHQYSEALSCYEQAISLNSKDPELWISQ 478
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +A+ F+ +S + RG + K + A+ + + L +
Sbjct: 479 GGVLVKLARYEEALICYDRAISFKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPD 538
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L + ++ A AI L + E+W H L ++A+ L
Sbjct: 539 AYQAWCQRGICLEKMEQHDDAIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLG 598
Query: 576 QVLYIDK 582
+ + I K
Sbjct: 599 KAISIQK 605
>gi|428319180|ref|YP_007117062.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428242860|gb|AFZ08646.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 400
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 112/256 (43%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R ++G+A G+ AI+ +++ L P PEA R L AI+ + +AI+
Sbjct: 62 RYNQGVALKKLGQLEEAIAAYNKSLTIKPNNPEAWYNRANVLRKLNRLSEAIASYEKAIE 121
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
PS EAW RG +L + EAI KA+ +P+ + + + K AA+
Sbjct: 122 LKPSYREAWTNRGNTLVSLEKFSEAIASYEKAIAIKPDYCEAWYNKAFALRKSDQNTAAI 181
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
++L + A+ GLAL+ Y +A ++ K +QL N AW
Sbjct: 182 ASYDKAIELKPDLHQAWYNRGLALADEKLYPEAVASYDKTLQLRPNSAAAWNKRGTAIAQ 241
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ E A+ + L + S+ ++ RGL L L + ++AI L + P N E Y
Sbjct: 242 MGKFEAAIASWDKALALKPNDSETFYNRGLALANLQRFEEAIASWDKTLELHPDNTEAWY 301
Query: 624 LRASCYHAIGEYREAV 639
RA I + EA+
Sbjct: 302 NRAIALKKIQRFTEAI 317
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 34/256 (13%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG A +AAI + EAI+ P EA +G A LG+ EAI +K+L
Sbjct: 28 LYERGNALEAMGRFQAAIESWEEAIELEPKFYEARYNQGVALKKLGQLEEAIAAYNKSLT 87
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+PN+ + + R V K + A+ ++L + A+T G L S+ ++ +A
Sbjct: 88 IKPNNPEAWYNRANVLRKLNRLSEAIASYEKAIELKPSYREAWTNRGNTLVSLEKFSEAI 147
Query: 538 EAHLKAIQLDRNFLEAWGHLT-------QFYQDLANSEKALEC---LQQVLY-------- 579
++ KAI + ++ EAW + Q +A+ +KA+E L Q Y
Sbjct: 148 ASYEKAIAIKPDYCEAWYNKAFALRKSDQNTAAIASYDKAIELKPDLHQAWYNRGLALAD 207
Query: 580 ----------IDKRF------SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
DK + A++ RG + +G+ + AI L + P++ E Y
Sbjct: 208 EKLYPEAVASYDKTLQLRPNSAAAWNKRGTAIAQMGKFEAAIASWDKALALKPNDSETFY 267
Query: 624 LRASCYHAIGEYREAV 639
R + + EA+
Sbjct: 268 NRGLALANLQRFEEAI 283
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ +++ ++ P Y EA RG + AI+ + +AI P EAW + A
Sbjct: 112 AIASYEKAIELKPSYREAWTNRGNTLVSLEKFSEAIASYEKAIAIKPDYCEAWYNKAFAL 171
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
++ AI KA+E +P+ + RG+ K + AV ++L + +A
Sbjct: 172 RKSDQNTAAIASYDKAIELKPDLHQAWYNRGLALADEKLYPEAVASYDKTLQLRPNSAAA 231
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G A++ +G+++ A + KA+ L N E + + +L E+A+ + L
Sbjct: 232 WNKRGTAIAQMGKFEAAIASWDKALALKPNDSETFYNRGLALANLQRFEEAIASWDKTLE 291
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+ ++A++ R + L + + +AI + + P + LY + +C +A+
Sbjct: 292 LHPDNTEAWYNRAIALKKIQRFTEAIASYDKIIALKPDD-PNLYYQKACVYAL 343
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +E Y A++ +D+ L+ P A RGTA A + EAAI+ + +A+
Sbjct: 200 NRGLALADEKLYPEAVASYDKTLQLRPNSAAAWNKRGTAIAQMGKFEAAIASWDKALALK 259
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E + RG A A L EAI K LE P++ + + R I K + F A+
Sbjct: 260 PNDSETFYNRGLALANLQRFEEAIASWDKTLELHPDNTEAWYNRAIALKKIQRFTEAIAS 319
Query: 506 LSACVKLDKENKSAY 520
+ L ++ + Y
Sbjct: 320 YDKIIALKPDDPNLY 334
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 83/209 (39%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E I ++I N + RG A A+G AI+ +A+E EP + + +G
Sbjct: 7 IEKPIDSGEKSIAVNTQKAQILYERGNALEAMGRFQAAIESWEEAIELEPKFYEARYNQG 66
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K A+ + + + N A+ L + +A ++ KAI+L ++
Sbjct: 67 VALKKLGQLEEAIAAYNKSLTIKPNNPEAWYNRANVLRKLNRLSEAIASYEKAIELKPSY 126
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
EAW + L +A+ ++ + I + +A++ + L Q+ AI
Sbjct: 127 REAWTNRGNTLVSLEKFSEAIASYEKAIAIKPDYCEAWYNKAFALRKSDQNTAAIASYDK 186
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + P + Y R Y EAV
Sbjct: 187 AIELKPDLHQAWYNRGLALADEKLYPEAV 215
>gi|359461418|ref|ZP_09249981.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 784
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P+ALI R RA +L+ A+ DF EAI NP+ A+ RG +LG+ AI D S+
Sbjct: 30 PDALINRANKRATNGDLDGALGDFDEAIALNPAKATAYFNRGFLFNSLGKFEAAIHDFSE 89
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+E P+ + +RG + +F A++D S ++++ AY + + +G++
Sbjct: 90 AIELLPDYDEAYFQRGNSYRQRGEFQRAIQDYSQAIRINPYCIKAYYKRADSRAELGDHP 149
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
A + I A+ F EKA+E + + R + AY RG
Sbjct: 150 GALTDFSQVILRLPKDANAYCQRGMFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYC 209
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L +G+ +KA KD S L DP N + Y RA +A+G +EA +
Sbjct: 210 LAQMGEAEKASKDFSEALLHDP-NHQAAYTRA---YALGMLKEAPV 251
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 18/226 (7%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + A++ F Q++ P A RG + ELE AI DFT AI+ NP +A+
Sbjct: 146 GDHPGALTDFSQVILRLPKDANAYCQRGMFLSQSGELEKAIEDFTSAIEHNPRLADAYFH 205
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A +GE+ +A +D S+AL +PN + R K+ A V +
Sbjct: 206 RGYCLAQMGEAEKASKDFSEALLHDPNH-QAAYTRAYALGMLKE---------APVDVSS 255
Query: 515 ENKSAYTY--------LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +A Y + +++ + + +E H + L+ +E + +
Sbjct: 256 PSSTATDYPLSLLEESVPVSVEPVEDSDDEQEPHPATVPLEPTSMEGFFERANNRIQRGD 315
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ A+ +++ D S+AY+ RG L LG+ + A++DL+ +
Sbjct: 316 LDGAISDYSKIIDNDPENSQAYYQRGQSLGALGESQAAMEDLNQAI 361
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 37/224 (16%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G+ AI F ++ +P +A RG A E E A DF+EA+ +P
Sbjct: 172 RGMFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYCLAQMGEAEKASKDFSEALLHDP 231
Query: 447 SAGEAWKRR---GQARAA----------------------LGESVEAIQDL-------SK 474
+ A+ R G + A + SVE ++D
Sbjct: 232 NHQAAYTRAYALGMLKEAPVDVSSPSSTATDYPLSLLEESVPVSVEPVEDSDDEQEPHPA 291
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
+ EP S + ER + D + A+ D S + D EN AY G +L ++GE +
Sbjct: 292 TVPLEPTSMEGFFERANNRIQRGDLDGAISDYSKIIDNDPENSQAYYQRGQSLGALGESQ 351
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
A E +AI R + + G + F +L+ + LE L+Q L
Sbjct: 352 AAMEDLNQAIHWAR--VHSLGLIRDFSGELSTT---LETLKQDL 390
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ + ++++P+ EA RG +RA +L+ AI D++ I+ +P+ EA+ +R +
Sbjct: 513 AIAQHTRAIEQNPLDAEAFFNRGQSRALGGDLQGAIEDYSRTIRLDPNNREAYVKRARCL 572
Query: 460 AALGESVEAIQDLSKALEFEP 480
+ALG+ A DL+ + P
Sbjct: 573 SALGDEAAAQADLNHVIRQSP 593
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
LE AI+ T AI+ NP EA+ RGQ+RA G+ AI+D S+ + +PN+ + +R
Sbjct: 510 LERAIAQHTRAIEQNPLDAEAFFNRGQSRALGGDLQGAIEDYSRTIRLDPNNREAYVKRA 569
Query: 491 IVNFKFKDFNAAVEDLSACVK 511
D AA DL+ ++
Sbjct: 570 RCLSALGDEAAAQADLNHVIR 590
>gi|428223876|ref|YP_007107973.1| hypothetical protein GEI7407_0420 [Geitlerinema sp. PCC 7407]
gi|427983777|gb|AFY64921.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
PCC 7407]
Length = 273
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y AI+ +D++L P EA RG A AI+ F EAI++ P AW
Sbjct: 21 GRYEGAIAKYDKVLAVQPGDYEAWTHRGYALEKLGRYSEAIASFNEAIRAQPKFVLAWHG 80
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A + E +AI+ AL F+P A I + G ++ A+E ++L
Sbjct: 81 KGIVLAKMNEYEDAIKSFEWALRFQPQDAKIWYNHGKALSHLCNYPDAIESFDKTLELRP 140
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN A+ + G+AL+++ Y +A + A+ ++ N AW + + L ++A +
Sbjct: 141 ENYKAWYHRGIALTNLNRYDEAIASFDTALVINPNCYYAWNYRSLVLAKLDRYQEAFDGF 200
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ L I R A++ R LG+ +AI L L + P+
Sbjct: 201 TRSLKIKDRNPNAWYGRACCCASLGRTDEAIDYLYRSLVLSPN 243
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+ + + + P EAW RG A LG EAI ++A+ +P H +GI
Sbjct: 24 EGAIAKYDKVLAVQPGDYEAWTHRGYALEKLGRYSEAIASFNEAIRAQPKFVLAWHGKGI 83
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V K ++ A++ ++ ++ + G ALS + Y A E+ K ++L
Sbjct: 84 VLAKMNEYEDAIKSFEWALRFQPQDAKIWYNHGKALSHLCNYPDAIESFDKTLELRPENY 143
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+AW H +L ++A+ L I+ A++ R L+L L ++++A +
Sbjct: 144 KAWYHRGIALTNLNRYDEAIASFDTALVINPNCYYAWNYRSLVLAKLDRYQEAFDGFTRS 203
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
L I N Y RA C ++G EA+
Sbjct: 204 LKIKDRNPNAWYGRACCCASLGRTDEAI 231
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y+ AI+ F++ ++ P + A G+G A E E AI F A++ P
Sbjct: 47 RGYALEKLGRYSEAIASFNEAIRAQPKFVLAWHGKGIVLAKMNEYEDAIKSFEWALRFQP 106
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W G+A + L +AI+ K LE P + + RGI ++ A+
Sbjct: 107 QDAKIWYNHGKALSHLCNYPDAIESFDKTLELRPENYKAWYHRGIALTNLNRYDEAIASF 166
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL-DRN 549
+ ++ A+ Y L L+ + Y++A + +++++ DRN
Sbjct: 167 DTALVINPNCYYAWNYRSLVLAKLDRYQEAFDGFTRSLKIKDRN 210
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 11/191 (5%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+ W GQ + LG AI K L +P + RG K ++ A+ +
Sbjct: 8 QTWYSHGQVLSGLGRYEGAIAKYDKVLAVQPGDYEAWTHRGYALEKLGRYSEAIASFNEA 67
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++ + A+ G+ L+ + EY+ A ++ A++ + W + + L N
Sbjct: 68 IRAQPKFVLAWHGKGIVLAKMNEYEDAIKSFEWALRFQPQDAKIWYNHGKALSHLCNYPD 127
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
A+E + L + KA++ RG+ L L ++ +AI + L I+P +CY
Sbjct: 128 AIESFDKTLELRPENYKAWYHRGIALTNLNRYDEAIASFDTALVINP----------NCY 177
Query: 630 HAIGEYREAVI 640
+A YR V+
Sbjct: 178 YA-WNYRSLVL 187
>gi|429124529|ref|ZP_19185061.1| hypothetical protein A966_09616 [Brachyspira hampsonii 30446]
gi|426279540|gb|EKV56562.1| hypothetical protein A966_09616 [Brachyspira hampsonii 30446]
Length = 357
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ +RG+A+ + G Y AI F+ +++ DP Y A G + E AI+ +
Sbjct: 37 SVEIYNNRGLAKSSLGMYEEAIDDFENVIRIDPKYINAYNNIGLVKHNLGLYEEAINYYN 96
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+ + + +A+ G A LG EAI+ KA+E PN + G++ +
Sbjct: 97 KALLLDNNCIQAYNNIGLANHNLGLYEEAIKYYIKAIEIFPN-VHTYNNIGLIKNDLGLY 155
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ AVE + LD AY +GL+ ++ Y +A E K I+LD + A+ ++
Sbjct: 156 DEAVEYFKKVILLDDRYTKAYYNMGLSKYNLKNYDEALEYFNKVIELDSKNIYAYNNIGI 215
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
QDL +ALE + L +DK + KAY+ RG+ L ++ A+ D + ++P+
Sbjct: 216 INQDLKLHREALEYFNKALVLDKNYYKAYYNRGVSELELELYECALYDFNICAELEPNYF 275
Query: 620 ECLYLRASCYHAIGEYREAV 639
R + YRE++
Sbjct: 276 PTYCKRGEVKFKLKNYRESL 295
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 89/186 (47%), Gaps = 33/186 (17%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
++++ K + + +S +I + RG+ + A++D +++D + +AY +GL
Sbjct: 22 KSLEYFDKLIFYYGDSVEIYNNRGLAKSSLGMYEEAIDDFENVIRIDPKYINAYNNIGLV 81
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL-------------TQFY------------ 561
++G Y++A + KA+ LD N ++A+ ++ ++Y
Sbjct: 82 KHNLGLYEEAINYYNKALLLDNNCIQAYNNIGLANHNLGLYEEAIKYYIKAIEIFPNVHT 141
Query: 562 --------QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
DL ++A+E ++V+ +D R++KAY+ GL + L + +A++ + +
Sbjct: 142 YNNIGLIKNDLGLYDEAVEYFKKVILLDDRYTKAYYNMGLSKYNLKNYDEALEYFNKVIE 201
Query: 614 IDPSNI 619
+D NI
Sbjct: 202 LDSKNI 207
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 9/183 (4%)
Query: 377 KSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K I +D R ++ G+++ N Y A+ F+++++ D A G +
Sbjct: 164 KVILLDDRYTKAYYNMGLSKYNLKNYDEALEYFNKVIELDSKNIYAYNNIGIINQDLKLH 223
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+ F +A+ + + +A+ RG + L A+ D + E EPN +RG
Sbjct: 224 REALEYFNKALVLDKNYYKAYYNRGVSELELELYECALYDFNICAELEPNYFPTYCKRGE 283
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V FK K++ ++ED + ++ + +K Y Y+G + +Y A +K I + N +
Sbjct: 284 VKFKLKNYRESLEDFNKYIEHREADKKIYFYIGFCGYKLKDYNNA----IKYINMSYNNI 339
Query: 552 EAW 554
+ +
Sbjct: 340 KTF 342
>gi|398825329|ref|ZP_10583630.1| tetratricopeptide repeat protein [Bradyrhizobium sp. YR681]
gi|398223937|gb|EJN10265.1| tetratricopeptide repeat protein [Bradyrhizobium sp. YR681]
Length = 368
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 1/253 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G A++ +++ ++ DP Y + R + EL+ AI+ FTEAI+ NP
Sbjct: 87 RGRAYSARGDRDHAMADYNEAIRLDPNYGPSYTSRAEGYFNKGELDLAIAGFTEAIEHNP 146
Query: 447 S-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A RGQA AA G++ A+ D ++A+ P +A R V +F+AA++D
Sbjct: 147 KHIYFATLMRGQAYAAKGDTDRAVADYTEAMRLNPAAASPYELRSNVRVNKGEFDAALDD 206
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ V+L+ + + + L + A + + +LD F+ A+ +
Sbjct: 207 CNNSVRLEPGSAGGHFCRAVVLLKWDDADGAIQEFDEVTRLDPTFMRAYSARALAWHKKG 266
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ ++A+ + + + + Y R + L LGQH +A+ D + L IDP + + L R
Sbjct: 267 DDKRAVADFDEAIRLQPGNATGYKNRAMALRELGQHARALADYNEALRIDPRDQDALVNR 326
Query: 626 ASCYHAIGEYREA 638
A Y + + + A
Sbjct: 327 ALLYMMMSDTKHA 339
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 3/235 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
SR N+G+ AI+ F + ++ +P +Y L+ RG A A + + + A++D+TEA++
Sbjct: 120 SRAEGYFNKGELDLAIAGFTEAIEHNPKHIYFATLM-RGQAYAAKGDTDRAVADYTEAMR 178
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP+A ++ R R GE A+ D + ++ EP SA R +V K+ D + A+
Sbjct: 179 LNPAAASPYELRSNVRVNKGEFDAALDDCNNSVRLEPGSAGGHFCRAVVLLKWDDADGAI 238
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
++ +LD AY+ LA G+ K+A +AI+L + + ++
Sbjct: 239 QEFDEVTRLDPTFMRAYSARALAWHKKGDDKRAVADFDEAIRLQPGNATGYKNRAMALRE 298
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
L +AL + L ID R A R LL + K A D +S L + P++
Sbjct: 299 LGQHARALADYNEALRIDPRDQDALVNRALLYMMMSDTKHARADFNSVLALPPND 353
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 111/270 (41%), Gaps = 39/270 (14%)
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
I+ DP A RG A +R+ + A D + AI+ +P+ G A+ RG+A +A G+
Sbjct: 39 IIAADPTNAVAYELRGEAYYMKRDRDRAFDDCSAAIRIDPNFGRAYNCRGRAYSARGDRD 98
Query: 467 EAIQDLSKALEFEPN-------SADILHERGIVNFKFKDFNAAVE--------------- 504
A+ D ++A+ +PN A+ +G ++ F A+E
Sbjct: 99 HAMADYNEAIRLDPNYGPSYTSRAEGYFNKGELDLAIAGFTEAIEHNPKHIYFATLMRGQ 158
Query: 505 -------------DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D + ++L+ S Y + GE+ A + +++L+
Sbjct: 159 AYAAKGDTDRAVADYTEAMRLNPAAASPYELRSNVRVNKGEFDAALDDCNNSVRLEPG-- 216
Query: 552 EAWGHLTQFYQDLA--NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A GH + L +++ A++ +V +D F +AY R L H G K+A+ D
Sbjct: 217 SAGGHFCRAVVLLKWDDADGAIQEFDEVTRLDPTFMRAYSARALAWHKKGDDKRAVADFD 276
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + P N RA +G++ A+
Sbjct: 277 EAIRLQPGNATGYKNRAMALRELGQHARAL 306
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
AI FD++ + DP + A R A + + + A++DF EAI+ P +K R A
Sbjct: 236 GAIQEFDEVTRLDPTFMRAYSARALAWHKKGDDKRAVADFDEAIRLQPGNATGYKNRAMA 295
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
LG+ A+ D ++AL +P D L R ++ D A D ++ + L +K
Sbjct: 296 LRELGQHARALADYNEALRIDPRDQDALVNRALLYMMMSDTKHARADFNSVLALPPNDKW 355
Query: 519 A 519
A
Sbjct: 356 A 356
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 85/193 (44%), Gaps = 1/193 (0%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I++ T I ++P+ A++ RG+A + A D S A+ +PN + RG
Sbjct: 33 IAEKTAIIAADPTNAVAYELRGEAYYMKRDRDRAFDDCSAAIRIDPNFGRAYNCRGRAYS 92
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEA 553
D + A+ D + ++LD +YT + GE A +AI+ + ++ A
Sbjct: 93 ARGDRDHAMADYNEAIRLDPNYGPSYTSRAEGYFNKGELDLAIAGFTEAIEHNPKHIYFA 152
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
Q Y ++++A+ + + ++ + Y LR + G+ A+ D ++ +
Sbjct: 153 TLMRGQAYAAKGDTDRAVADYTEAMRLNPAAASPYELRSNVRVNKGEFDAALDDCNNSVR 212
Query: 614 IDPSNIECLYLRA 626
++P + + RA
Sbjct: 213 LEPGSAGGHFCRA 225
>gi|427737217|ref|YP_007056761.1| hypothetical protein Riv7116_3769 [Rivularia sp. PCC 7116]
gi|427372258|gb|AFY56214.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 1381
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 14/261 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+AQ G +A+ ++Q ++ P E RG LE AI+ + +AI+ N
Sbjct: 504 QGLAQARAGNLEAAVQFYEQAVQIKPDVHEYWFNRGLTLFHLGRLEDAIASYDKAIEINN 563
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W RG+A LG +AI + ALE PN + G+ K + AV
Sbjct: 564 DFYKGWYNRGRALGELGYLEDAIISFNTALEIRPNYQEAWSNNGLALLKLGRVDEAVFCY 623
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQ 559
++L+ + + Y G+ALS GEY+ A +++ KA++++ +AW G L +
Sbjct: 624 DKSLELEPLDTENWYYRGVALSGNGEYENAIDSYDKALEIEPFLHDAWIDRGVAQGQLGE 683
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ + + + +KAL + F + R + LG+ K+A+ L I+P+
Sbjct: 684 WAEAIISWDKALG-------LRPDFYLTWFNRAVAFDNLGRRKEAVASYDKALEIEPNFH 736
Query: 620 ECLYLRASCYHAIGEYREAVI 640
Y RA + +Y +A++
Sbjct: 737 LAWYNRAVALFYLEQYEQAIL 757
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 114/247 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ +RG+ + G+ AI+ +D+ ++ + + + RG A LE AI F A
Sbjct: 533 EYWFNRGLTLFHLGRLEDAIASYDKAIEINNDFYKGWYNRGRALGELGYLEDAIISFNTA 592
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P+ EAW G A LG EA+ K+LE EP + + RG+ ++
Sbjct: 593 LEIRPNYQEAWSNNGLALLKLGRVDEAVFCYDKSLELEPLDTENWYYRGVALSGNGEYEN 652
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A++ ++++ A+ G+A +GE+ +A + KA+ L +F W + +
Sbjct: 653 AIDSYDKALEIEPFLHDAWIDRGVAQGQLGEWAEAIISWDKALGLRPDFYLTWFNRAVAF 712
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+L ++A+ + L I+ F A++ R + L L Q+++AI L I E
Sbjct: 713 DNLGRRKEAVASYDKALEIEPNFHLAWYNRAVALFYLEQYEQAILCYDRALQIKADYWEA 772
Query: 622 LYLRASC 628
RA+
Sbjct: 773 WLGRANA 779
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%)
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
EAW +G A+A G A+Q +A++ +P+ + RG+ F A+
Sbjct: 498 AEAWYFQGLAQARAGNLEAAVQFYEQAVQIKPDVHEYWFNRGLTLFHLGRLEDAIASYDK 557
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++++ + + G AL +G + A + A+++ N+ EAW + L +
Sbjct: 558 AIEINNDFYKGWYNRGRALGELGYLEDAIISFNTALEIRPNYQEAWSNNGLALLKLGRVD 617
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
+A+ C + L ++ ++ ++ RG+ L G G+++ AI L I+P + R
Sbjct: 618 EAVFCYDKSLELEPLDTENWYYRGVALSGNGEYENAIDSYDKALEIEPFLHDAWIDRGVA 677
Query: 629 YHAIGEYREAVI 640
+GE+ EA+I
Sbjct: 678 QGQLGEWAEAII 689
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I+ DF +RG A G AI F+ L+ P Y EA G A
Sbjct: 551 AIASYDKAIEINNDFYKGWYNRGRALGELGYLEDAIISFNTALEIRPNYQEAWSNNGLAL 610
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
++ A+ + ++++ P E W RG A + GE AI KALE EP D
Sbjct: 611 LKLGRVDEAVFCYDKSLELEPLDTENWYYRGVALSGNGEYENAIDSYDKALEIEPFLHDA 670
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+RG+ + ++ A+ + L + + +A ++G K+A ++ KA++
Sbjct: 671 WIDRGVAQGQLGEWAEAIISWDKALGLRPDFYLTWFNRAVAFDNLGRRKEAVASYDKALE 730
Query: 546 LDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
++ NF AW + + FY L E+A+ C + L I + +A+
Sbjct: 731 IEPNFHLAWYNRAVALFY--LEQYEQAILCYDRALQIKADYWEAW 773
>gi|374815102|ref|ZP_09718839.1| chaperone protein DnaJ [Treponema primitia ZAS-1]
Length = 489
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 118/248 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N + +A++ + ++ +P Y A + RG +++ + AI+D+TEAI+ +
Sbjct: 225 ARGEAAYNHKNWDTALNEISEAIRINPNYVNAYVARGVVYERKQDYDHAIADYTEAIKLD 284
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + RG A + AI D + A+ +PN A+ RGIV +D++ A+ D
Sbjct: 285 PNYAGTYFNRGNAYEGKQDYDHAIADYTMAIRLDPNYANTHVVRGIVYGYKQDYDHAIAD 344
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + SAY+ + + +Y A + +AI+LD N+ + + Y
Sbjct: 345 FTEAIRLKPDYTSAYSNRAVTYNKKQDYDHAIADYTEAIRLDPNYAGTYFNRGIAYGYKQ 404
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+ + + + ++ AY+ RG + AI D + + + P + R
Sbjct: 405 DYDHAIADYTEAIRLKPDYTDAYNNRGGAYGYKQDYDHAIADFTEAIRLKPDYTDAYNNR 464
Query: 626 ASCYHAIG 633
+ Y A G
Sbjct: 465 GNVYKAKG 472
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 13/259 (5%)
Query: 352 WDM-LKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE 410
WD L E S + N + V+ ++RG+ + Y AI+ + + +K
Sbjct: 236 WDTALNEISEAIRINPNY------------VNAYVARGVVYERKQDYDHAIADYTEAIKL 283
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP Y RG A +++ + AI+D+T AI+ +P+ RG + AI
Sbjct: 284 DPNYAGTYFNRGNAYEGKQDYDHAIADYTMAIRLDPNYANTHVVRGIVYGYKQDYDHAIA 343
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++A+ +P+ R + K +D++ A+ D + ++LD Y G+A
Sbjct: 344 DFTEAIRLKPDYTSAYSNRAVTYNKKQDYDHAIADYTEAIRLDPNYAGTYFNRGIAYGYK 403
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+Y A + +AI+L ++ +A+ + Y + + A+ + + + ++ AY+
Sbjct: 404 QDYDHAIADYTEAIRLKPDYTDAYNNRGGAYGYKQDYDHAIADFTEAIRLKPDYTDAYNN 463
Query: 591 RGLLLHGLGQHKKAIKDLS 609
RG + G A D +
Sbjct: 464 RGNVYKAKGAQSLAAADYA 482
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 7/226 (3%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A + + A+++ +EAI+ NP+ A+ RG + AI D ++A++ +P
Sbjct: 226 RGEAAYNHKNWDTALNEISEAIRINPNYVNAYVARGVVYERKQDYDHAIADYTEAIKLDP 285
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A RG +D++ A+ D + ++LD + + G+ +Y A
Sbjct: 286 NYAGTYFNRGNAYEGKQDYDHAIADYTMAIRLDPNYANTHVVRGIVYGYKQDYDHAIADF 345
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI+L ++ A+ + Y + + A+ + + +D ++ Y RG+
Sbjct: 346 TEAIRLKPDYTSAYSNRAVTYNKKQDYDHAIADYTEAIRLDPNYAGTYFNRGIAYGYKQD 405
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCY-------HAIGEYREAV 639
+ AI D + + + P + R Y HAI ++ EA+
Sbjct: 406 YDHAIADYTEAIRLKPDYTDAYNNRGGAYGYKQDYDHAIADFTEAI 451
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RGI + Y AI+ F + ++ P Y A R +++ + AI+D+TEAI+
Sbjct: 326 VVRGIVYGYKQDYDHAIADFTEAIRLKPDYTSAYSNRAVTYNKKQDYDHAIADYTEAIRL 385
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ + RG A + AI D ++A+ +P+ D + RG +D++ A+
Sbjct: 386 DPNYAGTYFNRGIAYGYKQDYDHAIADYTEAIRLKPDYTDAYNNRGGAYGYKQDYDHAIA 445
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
D + ++L + AY G + G A + A QL
Sbjct: 446 DFTEAIRLKPDYTDAYNNRGNVYKAKGAQSLAAADYAMAKQL 487
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 7/170 (4%)
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E N A I + RG + K+++ A+ ++S ++++ +AY G+ +Y A
Sbjct: 214 ELFVNDAKIHYARGEAAYNHKNWDTALNEISEAIRINPNYVNAYVARGVVYERKQDYDHA 273
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ +AI+LD N+ + + Y+ + + A+ + +D ++ + +RG++
Sbjct: 274 IADYTEAIKLDPNYAGTYFNRGNAYEGKQDYDHAIADYTMAIRLDPNYANTHVVRGIVYG 333
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY-------HAIGEYREAV 639
+ AI D + + + P RA Y HAI +Y EA+
Sbjct: 334 YKQDYDHAIADFTEAIRLKPDYTSAYSNRAVTYNKKQDYDHAIADYTEAI 383
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 25/144 (17%)
Query: 22 EIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLLAQSYEIQDICNRA 76
EI E +R++ +A AR + + ++ ++++AI+ LD A +Y NR
Sbjct: 242 EISEAIRINPNYVNAYVARGVVYERKQDYDHAIADYTEAIK-LDPNYAGTY-----FNRG 295
Query: 77 FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQ 136
Y + + H I D A++LDP ++++G + +++ Y+HA+
Sbjct: 296 NAYEGKQDYDHAIADYTMAIRLDPNYANTHVVRGIVYG-----------YKQDYDHAI-- 342
Query: 137 SADLKQFLELEELLTAAKQDRSVT 160
AD + + L+ T+A +R+VT
Sbjct: 343 -ADFTEAIRLKPDYTSAYSNRAVT 365
>gi|75908429|ref|YP_322725.1| hypothetical protein Ava_2212 [Anabaena variabilis ATCC 29413]
gi|75702154|gb|ABA21830.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 1276
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 110/254 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ G + AI+ ++Q ++ +P E RG AI+ + +AI+ P
Sbjct: 381 QGLQLAKTGDLSGAIANYEQAIQLNPNSYEYWFNRGLTLFHLERFVEAIASYDQAIEIKP 440
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG LG EA+ L +A+ +P+ +G K A+
Sbjct: 441 DYYKAWYNRGGTLGQLGLYEEAVASLKQAITIQPDMPGAWSSKGWAELKLGQIGEAIASY 500
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L E++ + Y G+AL +Y+ A +++ KA+++ +F E W +L
Sbjct: 501 DEALLLSPEDQENWYYRGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLKQ 560
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+ Q L I F A++ RG+ L LG ++AI + I P Y +A
Sbjct: 561 WSEAIASWDQALSIQADFYLAWYNRGVALENLGHREEAIASYKQAIAIKPDFHLAWYNQA 620
Query: 627 SCYHAIGEYREAVI 640
+ + EA++
Sbjct: 621 VALFYLERFLEAIV 634
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 34/194 (17%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y A++ Q + P P A +G A ++ AI+ + EA+ +P E W
Sbjct: 457 GLYEEAVASLKQAITIQPDMPGAWSSKGWAELKLGQIGEAIASYDEALLLSPEDQENWYY 516
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A + AI KALE +P+ ++ +RG+V F K ++ A+ + +
Sbjct: 517 RGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLKQWSEAIASWDQALSIQA 576
Query: 515 ENKSAYTYLGLALSSIGE-------YKKA----EEAHL---------------------- 541
+ A+ G+AL ++G YK+A + HL
Sbjct: 577 DFYLAWYNRGVALENLGHREEAIASYKQAIAIKPDFHLAWYNQAVALFYLERFLEAIVCY 636
Query: 542 -KAIQLDRNFLEAW 554
A+Q+ ++ EAW
Sbjct: 637 DNALQIKLDYWEAW 650
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA + +Y +AI +D+ L+ P + E I RG ++ AI+ + +A+
Sbjct: 517 RGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLKQWSEAIASWDQALSIQA 576
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG A LG EAI +A+ +P+ + + + F + F A+
Sbjct: 577 DFYLAWYNRGVALENLGHREEAIASYKQAIAIKPDFHLAWYNQAVALFYLERFLEAIVCY 636
Query: 507 SACVKLDKENKSAYTYLGLALSSIGE 532
+++ + A+ G A+ ++ E
Sbjct: 637 DNALQIKLDYWEAWIGRGTAIGNLNE 662
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L +G+ K D + A+ + ++L+ + + GL L + + +A ++ +AI+
Sbjct: 378 LFYQGLQLAKTGDLSGAIANYEQAIQLNPNSYEYWFNRGLTLFHLERFVEAIASYDQAIE 437
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ ++ +AW + L E+A+ L+Q + I A+ +G LGQ +AI
Sbjct: 438 IKPDYYKAWYNRGGTLGQLGLYEEAVASLKQAITIQPDMPGAWSSKGWAELKLGQIGEAI 497
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + P + E Y R +Y A+
Sbjct: 498 ASYDEALLLSPEDQENWYYRGIALGVDEQYEAAI 531
>gi|268315734|ref|YP_003289453.1| hypothetical protein Rmar_0157 [Rhodothermus marinus DSM 4252]
gi|262333268|gb|ACY47065.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
Length = 465
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 114/241 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI N G++ A+ +++ L+ DP+ E G LE A+ EA + NP
Sbjct: 113 GITLDNLGRFEEALQAYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPD 172
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E W G LG+ ++ + LE +P SAD + RGIV + + AVE
Sbjct: 173 HPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMGRYREAVESYD 232
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ + ++ SA+ G AL+++G+ + A E++ K ++++ + ++ Y++L
Sbjct: 233 YAIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEY 292
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E A++ Q L D +++A++ G L + ++AI + + + P E Y +A
Sbjct: 293 ETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKAD 352
Query: 628 C 628
C
Sbjct: 353 C 353
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 129/299 (43%), Gaps = 5/299 (1%)
Query: 346 SKLSFKWDMLKETSNEAKRNKKF-----CVTRISKSKSISVDFRLSRGIAQVNEGKYASA 400
S F D L+E + +F + R+ + D + RGI + G++ A
Sbjct: 32 SSAYFDSDTLEEIATYYYERGRFEDALGVIDRLLALHPTASDAWMRRGILLSHLGRHEEA 91
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
+ +++ L +P E L+ G E A+ + A+Q +P E + G
Sbjct: 92 LQAYERALSLNPTDTETLVNLGITLDNLGRFEEALQAYERALQIDPLNDEIYYNLGITLE 151
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ EA+Q L +A P+ ++ +E G + D ++ ++LD + A+
Sbjct: 152 RMDRLEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAW 211
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G+ L+ +G Y++A E++ AI + +F AW + +L + A+E ++VL I
Sbjct: 212 YNRGIVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEI 271
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ Y+ L L +++ AI+ L DP+ E Y CY A+ + EA+
Sbjct: 272 EGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAI 330
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 48/276 (17%)
Query: 355 LKETSNEAKRNKKFCVTRISKSK----------SISVDF---RLSRGIAQVNEGKYASAI 401
L S +A N+ + R+ + + +I DF +RG A N G AI
Sbjct: 203 LDPYSADAWYNRGIVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAI 262
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
++++L+ + P A +E E AI F A++ +P+ EAW G A
Sbjct: 263 ESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDA 322
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
L EAI + +A+ +P +++ + + + + A++ ++LD +N+ A+
Sbjct: 323 LERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIELDPQNRDAWL 382
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
L G ++A +A+ +A+ L+ +
Sbjct: 383 DYAETLLEAGYVEEALQAYRQALTLNPD-------------------------------- 410
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++AY + L LG+ ++ I+ L L +DPS
Sbjct: 411 ---ARAYIRQARALLALGRSEEGIRSLKMALRLDPS 443
>gi|220906220|ref|YP_002481531.1| hypothetical protein Cyan7425_0783 [Cyanothece sp. PCC 7425]
gi|219862831|gb|ACL43170.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 542
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 2/276 (0%)
Query: 366 KKFCVTRISK-SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
K F V + S + D + IA+ + Y AI+ FD+ ++ +P A RG A
Sbjct: 237 KGFPVPVAAPLSNQPTTDNFFLQAIAKYRQQDYRGAIADFDRAIRLNPQLDLAYSNRGLA 296
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
R ++ A++DF AI+ NP A+ RG AR L + A D +A+ P AD
Sbjct: 297 RYGLQDYRGAVADFDRAIRLNPQLDLAYYNRGLARYGLQDYRGARADFDQAIRLNPKDAD 356
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ RG V + +D+ AV D ++L+ + AY G+ + +Y A +AI
Sbjct: 357 AYNNRGSVRRELQDYRGAVADFDRAIRLNPKFDLAYYNRGITRRKLQDYGGALADFDQAI 416
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L+ +A+ + L + AL Q + ++ + Y+ RG + +GL ++ A
Sbjct: 417 RLNPRDADAYNNRGFVRYGLQDYGGALADFDQAIRLNPEDADIYNNRGFVRYGLQDYRGA 476
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
I D + + P ++ Y A E R A +
Sbjct: 477 IADFDQAIRLQP-DLALAYYHRGLARAQAEERRAAL 511
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 77/150 (51%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A++ FD+ ++ +P + A RG R ++ A++DF +AI+ NP +A+ RG
Sbjct: 371 YRGAVADFDRAIRLNPKFDLAYYNRGITRRKLQDYGGALADFDQAIRLNPRDADAYNNRG 430
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
R L + A+ D +A+ P ADI + RG V + +D+ A+ D ++L +
Sbjct: 431 FVRYGLQDYGGALADFDQAIRLNPEDADIYNNRGFVRYGLQDYRGAIADFDQAIRLQPDL 490
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
AY + GLA + E + A + +A +L
Sbjct: 491 ALAYYHRGLARAQAEERRAALPDYQRAAEL 520
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ Y A++ FD+ ++ +P A RG AR ++ A +DF +AI+ N
Sbjct: 292 NRGLARYGLQDYRGAVADFDRAIRLNPQLDLAYYNRGLARYGLQDYRGARADFDQAIRLN 351
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG R L + A+ D +A+ P + RGI K +D+ A+ D
Sbjct: 352 PKDADAYNNRGSVRRELQDYRGAVADFDRAIRLNPKFDLAYYNRGITRRKLQDYGGALAD 411
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++L+ + AY G + +Y A +AI+L+ + + + L
Sbjct: 412 FDQAIRLNPRDADAYNNRGFVRYGLQDYGGALADFDQAIRLNPEDADIYNNRGFVRYGLQ 471
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ Q + + + AY+ RGL + + A+ D
Sbjct: 472 DYRGAIADFDQAIRLQPDLALAYYHRGLARAQAEERRAALPD 513
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + Y A++ FDQ ++ +P +A RG R ++ A++DF +AI+ N
Sbjct: 394 NRGITRRKLQDYGGALADFDQAIRLNPRDADAYNNRGFVRYGLQDYGGALADFDQAIRLN 453
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG R L + AI D +A+ +P+ A + RG+ + ++ AA+ D
Sbjct: 454 PEDADIYNNRGFVRYGLQDYRGAIADFDQAIRLQPDLALAYYHRGLARAQAEERRAALPD 513
Query: 506 LSACVKL 512
+L
Sbjct: 514 YQRAAEL 520
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE 68
+R +L + + D+ +R++ A A R + L+++ A+ D + + E
Sbjct: 398 TRRKLQDYGGALADFDQAIRLNPRDADAYNNRGFVR--YGLQDYGGALADFDQAIRLNPE 455
Query: 69 IQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
DI N R F L+ ++ I D D+A++L P L AY +G A + + AL ++
Sbjct: 456 DADIYNNRGFVRYGLQDYRGAIADFDQAIRLQPDLALAYYHRGLARAQAEERRAALPDYQ 515
Query: 128 KGYEHALHQSADLKQFLELEEL 149
+ E A Q D L + +L
Sbjct: 516 RAAELAQAQGNDQVYQLAIMQL 537
>gi|434387356|ref|YP_007097967.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
gi|428018346|gb|AFY94440.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
Length = 607
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 124/311 (39%), Gaps = 6/311 (1%)
Query: 313 SDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKET------SNEAKRNK 366
S LND + + I +NK++ + K F + T S K
Sbjct: 176 SGGPVLNDRGELIAVHGRGDIQENKATANANVFVKTGFNLGIPANTFVQIAGSMGVKIGG 235
Query: 367 KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
K ++ ++ + D + +G Y AI FD+ + P Y A I R A
Sbjct: 236 KTAPVIATQPRTTTADDFFVTAATKFRQGDYPGAIQGFDRAIATKPNYTAAYIARAEANL 295
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ E I D A+ NP + +A+ RG + +G++ A DL +A+ P +
Sbjct: 296 YLDNEEEVIRDANRALNLNPRSDDAYALRGGGKIGIGDAKGAFADLDRAIALNPRNPRGY 355
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
RG ++ D A++ + + +D AY +A +GE + AE +A+Q+
Sbjct: 356 FYRGFGQMQYGDPTQALQSIDKALAIDPNLSDAYAVRAVAKYLLGEPQAAESDFARALQI 415
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ N A+ + E LQ+ + I + + Y LRG G + +AI
Sbjct: 416 NANNFLAYVYRGFIRVVAGKKETGFADLQKAIAISPKNAIGYSLRGQAYANTGDYARAIS 475
Query: 607 DLSSGLGIDPS 617
+ + L I P+
Sbjct: 476 EYNRALQIKPN 486
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 110/261 (42%), Gaps = 14/261 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG ++ G A + D+ + +P P RG + + A+ +A+ +P
Sbjct: 324 RGGGKIGIGDAKGAFADLDRAIALNPRNPRGYFYRGFGQMQYGDPTQALQSIDKALAIDP 383
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ R A+ LGE A D ++AL+ N+ RG + DL
Sbjct: 384 NLSDAYAVRAVAKYLLGEPQAAESDFARALQINANNFLAYVYRGFIRVVAGKKETGFADL 443
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-----GHLTQ-- 559
+ + +N Y+ G A ++ G+Y +A + +A+Q+ N+ A+ H+ Q
Sbjct: 444 QKAIAISPKNAIGYSLRGQAYANTGDYARAISEYNRALQIKPNYGSAYANRGVAHMQQQN 503
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
F Q LA+ EKAL+ ++ AY R + ++++ D + I+ ++
Sbjct: 504 FKQGLADVEKALK-------LNPSNETAYQGRAIYYINQKDFRRSLADATRASQINGASP 556
Query: 620 ECLYLRASCYHAIGEYREAVI 640
+ ++ Y +G A I
Sbjct: 557 DSYVIQGVSYIGLGNRERAKI 577
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG---RGTARAFQRELEAAISDFTEAIQ 443
RG +V GK + F + K + P+ IG RG A A + AIS++ A+Q
Sbjct: 426 RGFIRVVAGKKETG---FADLQKAIAISPKNAIGYSLRGQAYANTGDYARAISEYNRALQ 482
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P+ G A+ RG A + + D+ KAL+ P++ R I KDF ++
Sbjct: 483 IKPNYGSAYANRGVAHMQQQNFKQGLADVEKALKLNPSNETAYQGRAIYYINQKDFRRSL 542
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + +++ + +Y G++ +G ++A+ A KA QL E G+ + YQD
Sbjct: 543 ADATRASQINGASPDSYVIQGVSYIGLGNRERAKIALQKAAQL----YEKRGNRGKDYQD 598
>gi|428312179|ref|YP_007123156.1| hypothetical protein Mic7113_4045 [Microcoleus sp. PCC 7113]
gi|428253791|gb|AFZ19750.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 436
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 6/254 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ +V +G AI FD L+ +P + EA RG R + + AI D+T A+Q N
Sbjct: 7 NQGLEKVLQGNLEGAIQDFDHALQINPHFTEAYYRRGVVRFDLGDRQGAIEDYTLALQLN 66
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ E++ R A AL E +A+ D+ L +PN +G + D AA+
Sbjct: 67 CESIESYFGRALAWLALSEPQKALADVKHILNLKPNHTPAYSLQGTAYRQLGDTQAAIAS 126
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L +L E K L SI + + + + ++ NFLE+ L++ Q
Sbjct: 127 LKNAAQLYLEQKDTVN-CRRCLESISQMQATQRRAVMVTEI-ANFLES--ALSKIKQ--G 180
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
ALE L +L ++ R ++A RG++ LG +++A++DL+ L ++P + + L R
Sbjct: 181 QYRAALEDLNWLLQVEPRHAQALCYRGIVYSKLGHYQEAMRDLAQALQLNPQDAQVLNQR 240
Query: 626 ASCYHAIGEYREAV 639
+G+YR A+
Sbjct: 241 GLVRLELGDYRGAI 254
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 79/152 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L ++++ +G+Y +A+ + +L+ +P + +AL RG + + A+ D +A+Q
Sbjct: 170 LESALSKIKQGQYRAALEDLNWLLQVEPRHAQALCYRGIVYSKLGHYQEAMRDLAQALQL 229
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + +RG R LG+ AI+D S+ ++ P++ + RG K+KDF+ A+
Sbjct: 230 NPQDAQVLNQRGLVRLELGDYRGAIEDFSQLIQSNPHNIEAYINRGHAYRKYKDFSQAIA 289
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
D S + L ++ Y + S + +Y+ A
Sbjct: 290 DYSTALSLKPDHAELYCHRAAVRSDLTDYQGA 321
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q + AA+ D +Q P +A RG + LG EA++DL++AL+ P A +L+
Sbjct: 179 QGQYRAALEDLNWLLQVEPRHAQALCYRGIVYSKLGHYQEAMRDLAQALQLNPQDAQVLN 238
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+RG+V + D+ A+ED S ++ + N AY G A ++ +A + A+ L
Sbjct: 239 QRGLVRLELGDYRGAIEDFSQLIQSNPHNIEAYINRGHAYRKYKDFSQAIADYSTALSLK 298
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQV--LYIDK 582
+ E + H DL + + A++ Q +Y+D+
Sbjct: 299 PDHAELYCHRAAVRSDLTDYQGAVDDYQSAANIYLDQ 335
>gi|158335983|ref|YP_001517157.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris marina MBIC11017]
gi|158306224|gb|ABW27841.1| serine/threonine kinase with TPR repeats [Acaryochloris marina
MBIC11017]
Length = 810
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI+ FD +LK+ P A RG R +AAISD+ EA+ +P E +
Sbjct: 389 GKYPEAIAQFDTLLKQQPKTAAAFRERGEIRFATGGYQAAISDYNEALTLDPKDAETYNH 448
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A+ LG+ AI D KA+ +PN A G V F AAV++L ++ +
Sbjct: 449 RGDAQVELGKYEAAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAES 508
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ SA+ G S +G+ + AE+ KA++L + + L + A+
Sbjct: 509 NHLSAHVNRGSYRSVLGDPEGAEQDWEKALKLPVRTAKDYASRGYAKSRLDRKQDAIADY 568
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
Q L I+ + ++A+ G + + G+ ++A + L I+P++ LR
Sbjct: 569 NQALTINPQLTRAHTNLGGVFYEQGEIEQARQSFDQALQINPNSTSAYLLRG 620
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 105/244 (43%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + SA F+Q L+ Y EA + G A + AI+ F ++ P A++
Sbjct: 355 GNWQSATENFEQALELKADYTEAALKLGETYAEIGKYPEAIAQFDTLLKQQPKTAAAFRE 414
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+ R A G AI D ++AL +P A+ + RG + + AA+ D ++L
Sbjct: 415 RGEIRFATGGYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEAAIADYRKAIRLQP 474
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y LG G+ + A + KAIQ + N L A + + L + E A +
Sbjct: 475 NQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRGSYRSVLGDPEGAEQDW 534
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ L + R +K Y RG L + + AI D + L I+P ++ GE
Sbjct: 535 EKALKLPVRTAKDYASRGYAKSRLDRKQDAIADYNQALTINPQLTRAHTNLGGVFYEQGE 594
Query: 635 YREA 638
+A
Sbjct: 595 IEQA 598
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 38/306 (12%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T + + + FR RG + G Y +AIS +++ L DP E RG A+ +
Sbjct: 400 TLLKQQPKTAAAFR-ERGEIRFATGGYQAAISDYNEALTLDPKDAETYNHRGDAQVELGK 458
Query: 431 LEAAISDFTEAIQSNPSAGEAW----------------------------------KRRG 456
EAAI+D+ +AI+ P+ + + RG
Sbjct: 459 YEAAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRG 518
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
R+ LG+ A QD KAL+ +A RG + A+ D + + ++ +
Sbjct: 519 SYRSVLGDPEGAEQDWEKALKLPVRTAKDYASRGYAKSRLDRKQDAIADYNQALTINPQL 578
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALEC 573
A+T LG GE ++A ++ +A+Q++ N A+ G L + A+ E AL+
Sbjct: 579 TRAHTNLGGVFYEQGEIEQARQSFDQALQINPNSTSAYLLRGELRAYQGQQADFEGALQD 638
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + I+ + + R L L + ++A+ D + GL I+PS+ +R + Y +
Sbjct: 639 YDRAIAINPKDPFVLNNRCGALFSLNELQRALADCNKGLEINPSSAALYTVRGNIYLRLK 698
Query: 634 EYREAV 639
+Y +A+
Sbjct: 699 QYEKAI 704
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 37/266 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG AQV GKY +AI+ + + ++ P + + G+ Q +LEAA+ + +AIQ+
Sbjct: 449 RGDAQVELGKYEAAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAES 508
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A RG R+ LG+ A QD KAL+ +A RG + A+ D
Sbjct: 509 NHLSAHVNRGSYRSVLGDPEGAEQDWEKALKLPVRTAKDYASRGYAKSRLDRKQDAIADY 568
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQD 563
+ + ++ + A+T LG GE ++A ++ +A+Q++ N A+ G L +
Sbjct: 569 NQALTINPQLTRAHTNLGGVFYEQGEIEQARQSFDQALQINPNSTSAYLLRGELRAYQGQ 628
Query: 564 LANSEKALECLQQVLYIDKR------------FS----------------------KAYH 589
A+ E AL+ + + I+ + FS Y
Sbjct: 629 QADFEGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRALADCNKGLEINPSSAALYT 688
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGID 615
+RG + L Q++KAI+D + I+
Sbjct: 689 VRGNIYLRLKQYEKAIQDYGRTIQIN 714
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 102/241 (42%), Gaps = 36/241 (14%)
Query: 376 SKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++++++ +L+R G +G+ A FDQ L+ +P A + RG RA+Q +
Sbjct: 569 NQALTINPQLTRAHTNLGGVFYEQGEIEQARQSFDQALQINPNSTSAYLLRGELRAYQGQ 628
Query: 431 ---LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E A+ D+ AI NP R A +L E A+ D +K LE P+SA +
Sbjct: 629 QADFEGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRALADCNKGLEINPSSAALYT 688
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG + + K + A++D ++++ KS + S Y A ++ LD
Sbjct: 689 VRGNIYLRLKQYEKAIQDYGRTIQINDTRKS-------EVRSQAAYSNRASARIQLKDLD 741
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
AL+ L L I ++ Y+ RGLL + + AI D
Sbjct: 742 ---------------------GALQDLNDALRIKPDAAEDYYKRGLLYSVQNKRQDAITD 780
Query: 608 L 608
L
Sbjct: 781 L 781
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
Q + + A+ +D+ + +P P L R A EL+ A++D + ++ NPS+
Sbjct: 626 QGQQADFEGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRALADCNKGLEINPSSAA 685
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEF------EPNSADILHERGIVNFKFKDFNAAVE 504
+ RG L + +AIQD + ++ E S R + KD + A++
Sbjct: 686 LYTVRGNIYLRLKQYEKAIQDYGRTIQINDTRKSEVRSQAAYSNRASARIQLKDLDGALQ 745
Query: 505 DLSACVKLDKENKSAYTYLGLALS-------SIGEYKKAEEAHLK 542
DL+ +++ + Y GL S +I + KKA + + K
Sbjct: 746 DLNDALRIKPDAAEDYYKRGLLYSVQNKRQDAITDLKKAADLYAK 790
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 54/118 (45%)
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
+ G + G ++ A E +A++L ++ EA L + Y ++ +A+ +L
Sbjct: 346 FWGQQAAQSGNWQSATENFEQALELKADYTEAALKLGETYAEIGKYPEAIAQFDTLLKQQ 405
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + A+ RG + G ++ AI D + L +DP + E R +G+Y A+
Sbjct: 406 PKTAAAFRERGEIRFATGGYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEAAI 463
>gi|254410505|ref|ZP_05024284.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196182711|gb|EDX77696.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 323
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 118/238 (49%), Gaps = 11/238 (4%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+++ + DF + RG+ ++ G + AI F+Q +K D A RG Q E + AI
Sbjct: 64 AQTTAEDF-VQRGVEKLATGDFRGAIDDFNQAIKIDHNSASAYSIRGHTYTLQGEFKKAI 122
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+D AI+ P+ A+ RG AR +G+ AI D +KA++ PN A + RG + +
Sbjct: 123 TDLNRAIEIAPNFDPAYNNRGFARLQMGDLEGAISDFTKAIDINPNLALAYNGRGFAHLQ 182
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
++ A+ D + ++++ AY A G++K+A +AI ++ N+ + +
Sbjct: 183 QENIQEAITDFNQALEINPNLVLAYNNRANARLEQGKFKEAIADFNRAIAVNPNYAQGYS 242
Query: 556 -----HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
HL Q DL + AL L Q L I+ +++AY+ RGL L ++AI D
Sbjct: 243 NRGFVHLQQ--NDL---QTALADLNQALEINPNYAQAYYHRGLTHVQLSNEEEAIADF 295
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 367 KFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
K +T ++++ I+ +F + RG A++ G AIS F + + +P A GRG
Sbjct: 119 KKAITDLNRAIEIAPNFDPAYNNRGFARLQMGDLEGAISDFTKAIDINPNLALAYNGRGF 178
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
A Q ++ AI+DF +A++ NP+ A+ R AR G+ EAI D ++A+ PN A
Sbjct: 179 AHLQQENIQEAITDFNQALEINPNLVLAYNNRANARLEQGKFKEAIADFNRAIAVNPNYA 238
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
RG V+ + D A+ DL+ ++++ AY + GL + ++A KA
Sbjct: 239 QGYSNRGFVHLQQNDLQTALADLNQALEINPNYAQAYYHRGLTHVQLSNEEEAIADFQKA 298
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
L R G +T YQ+ AL+ +QQ+
Sbjct: 299 ADLSRQ----QGDMT-IYQN------ALDQIQQI 321
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 130/298 (43%), Gaps = 12/298 (4%)
Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSK----SISVDFRLSRGIAQVNEGKYA--SAI 401
+S +++ LK+T ++ R K F + I + +S F ++V K + +A
Sbjct: 1 MSIQFNHLKQTLDQQHRQKIFGIPEIIRRTIYLLGLSAIFINPVAASEVQFPKISLTTAE 60
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
S Q ED + RG + + AI DF +AI+ + ++ A+ RG
Sbjct: 61 SYIAQTTAED------FVQRGVEKLATGDFRGAIDDFNQAIKIDHNSASAYSIRGHTYTL 114
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
GE +AI DL++A+E PN + RG + D A+ D + + ++ AY
Sbjct: 115 QGEFKKAITDLNRAIEIAPNFDPAYNNRGFARLQMGDLEGAISDFTKAIDINPNLALAYN 174
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G A ++A +A++++ N + A+ + + ++A+ + + ++
Sbjct: 175 GRGFAHLQQENIQEAITDFNQALEINPNLVLAYNNRANARLEQGKFKEAIADFNRAIAVN 234
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+++ Y RG + + A+ DL+ L I+P+ + Y R + + EA+
Sbjct: 235 PNYAQGYSNRGFVHLQQNDLQTALADLNQALEINPNYAQAYYHRGLTHVQLSNEEEAI 292
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG +G++ AI+ ++ ++ P + A RG AR +LE AISDFT+AI NP
Sbjct: 108 RGHTYTLQGEFKKAITDLNRAIEIAPNFDPAYNNRGFARLQMGDLEGAISDFTKAIDINP 167
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG A EAI D ++ALE PN + R + F A+ D
Sbjct: 168 NLALAYNGRGFAHLQQENIQEAITDFNQALEINPNLVLAYNNRANARLEQGKFKEAIADF 227
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + ++ Y+ G + + A +A++++ N+ +A+ H + L+N
Sbjct: 228 NRAIAVNPNYAQGYSNRGFVHLQQNDLQTALADLNQALEINPNYAQAYYHRGLTHVQLSN 287
Query: 567 SEKALECLQQ 576
E+A+ Q+
Sbjct: 288 EEEAIADFQK 297
>gi|359464250|ref|ZP_09252813.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 1345
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 16/264 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ ++G+Y A++ F+Q + DP P G+G Q++ +AAI+ T+AI+ P
Sbjct: 761 GMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQYQAAIAAHTQAIELEPD 820
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + R + AI DL+KA++ P + RG AA+ D S
Sbjct: 821 SANDYFSRANVYITTQQYQPAIADLTKAIQLAPPDPIYFNNRGDAYAALNQPEAALADYS 880
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---------DRNF----LEAW 554
+ +DK N AY LG +Y++A +AI++ D+ + A
Sbjct: 881 QAIAVDKNNTRAYIGLGTVYQRTRQYQRAIAQFDQAIEVADFPQQLETDKKYKGLAYSAR 940
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
G L Y DL E+A+ Q + + + + Y R L L ++++AI D + + I
Sbjct: 941 GFL---YSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNRYQEAIADYTQAIEI 997
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
P ++ R Y +G+ EA
Sbjct: 998 APKDLSTYIQRGKVYRTLGQEAEA 1021
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 131/301 (43%), Gaps = 44/301 (14%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA- 441
F ++RG + +Y ++ +Q ++ DP A RG +F + + AI+D +A
Sbjct: 688 FYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLKKAI 747
Query: 442 ------IQSNPSAGEAWKRRGQARAAL-----GESVE----------------------A 468
I + G + +G+ + AL G +++ A
Sbjct: 748 ALDSQYISAYGGLGMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQYQAA 807
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I ++A+E EP+SA+ R V + + A+ DL+ ++L + + G A +
Sbjct: 808 IAAHTQAIELEPDSANDYFSRANVYITTQQYQPAIADLTKAIQLAPPDPIYFNNRGDAYA 867
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ-------DLANSEKALEC--LQQVLY 579
++ + + A + +AI +D+N A+ L YQ +A ++A+E Q L
Sbjct: 868 ALNQPEAALADYSQAIAVDKNNTRAYIGLGTVYQRTRQYQRAIAQFDQAIEVADFPQQLE 927
Query: 580 IDKRFSK-AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
DK++ AY RG L LG+ ++AI D S + + P RA Y A+ Y+EA
Sbjct: 928 TDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNRYQEA 987
Query: 639 V 639
+
Sbjct: 988 I 988
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 108/278 (38%), Gaps = 34/278 (12%)
Query: 396 KYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+YA A++ FD+ ++ +P + A G+ Q AA + + P+ WK
Sbjct: 565 QYAEALAAFDRAIQLNPSFVHLAWYGKALVYRSQENFPAAEMALRKVLTLKPNYKPGWKV 624
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHE-------------------------- 488
+ +A+ ++ L+ P A +L+E
Sbjct: 625 LSAVYRLQKKPEQALTAVNSGLKIAPTDAQLLNEKYVVLSVLYRYPEALTAIDAAIAQAP 684
Query: 489 -------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
RG V K + + L+ +++D AYT G+ S + K+A
Sbjct: 685 RAAFYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLK 744
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI LD ++ A+G L Y ++AL Q + ID + Y +G + Q+
Sbjct: 745 KAIALDSQYISAYGGLGMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQY 804
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI + + ++P + + RA+ Y +Y+ A+
Sbjct: 805 QAAIAAHTQAIELEPDSANDYFSRANVYITTQQYQPAI 842
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 109/269 (40%), Gaps = 21/269 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + GK AI+ F Q ++ P R + AI+D+T+AI+
Sbjct: 939 ARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNRYQEAIADYTQAIEIA 998
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + +RG+ LG+ EA D K L+ EP+ + R V K + A+ D
Sbjct: 999 PKDLSTYIQRGKVYRTLGQEAEANADFQKVLQTEPSDSQGYEARADVYKSLKRYPEALAD 1058
Query: 506 LSACVKLDKENKSAYTYL----GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
+ +KL + + L ++ +Y++A + KA+ L N F
Sbjct: 1059 YTQAIKLAPQTPLQRSLLHSSRAQMYGNLQQYEQANSDYSKALALLPN------PTVPFA 1112
Query: 562 QDL-----------ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
DL E AL Q + I+ + AY RG L G +++ A+ D ++
Sbjct: 1113 ADLYIARGNNSLNWQRQEDALADFNQAININPKNVMAYVGRGRLSLGTQKYQDALADFNT 1172
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++P R+ Y A+ +A+
Sbjct: 1173 VIKLNPKLGFVYDFRSRTYQALNRIEDAI 1201
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 4/219 (1%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
+ + + D ++RG +N + A++ F+Q + +P A +GRG ++ +
Sbjct: 1106 NPTVPFAADLYIARGNNSLNWQRQEDALADFNQAININPKNVMAYVGRGRLSLGTQKYQD 1165
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++DF I+ NP G + R + AL +AI D + +E + N+A RGI++
Sbjct: 1166 ALADFNTVIKLNPKLGFVYDFRSRTYQALNRIEDAITDADQWIELQANAAS-YTRRGILH 1224
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ + A+ D + L+ + LGL G K+A +AI+LD + E
Sbjct: 1225 VLGANPSLALNDFQQAITLNPKAIIPTINLGLIYYEQGNRKQAIAQFRQAIELDSSLAEP 1284
Query: 554 WGHL-TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
L T Y + ++A+ Q L D +F + L+
Sbjct: 1285 QLALATALYPR--DQQQAIALAQSALKQDPKFREVEFLK 1321
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 109/261 (41%), Gaps = 40/261 (15%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPS------AGEAWKRRGQ-----ARAAL-- 462
E I RG + A++ F AIQ NPS G+A R Q A AL
Sbjct: 551 EVWIERGNQLWRLEQYAEALAAFDRAIQLNPSFVHLAWYGKALVYRSQENFPAAEMALRK 610
Query: 463 ----------GESV------------EAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
G V +A+ ++ L+ P A +L+E+ +V +
Sbjct: 611 VLTLKPNYKPGWKVLSAVYRLQKKPEQALTAVNSGLKIAPTDAQLLNEKYVVLSVLYRYP 670
Query: 501 AAVEDLSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
E L+A + A Y+ G L + Y++ A +AI++D N A+ +
Sbjct: 671 ---EALTAIDAAIAQAPRAAFYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRG 727
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
Y L ++A+ L++ + +D ++ AY G+L H G++++A+ + G+ IDP N
Sbjct: 728 VTYSFLKRPKEAIADLKKAIALDSQYISAYGGLGMLYHSQGRYQEALAQFNQGIAIDPKN 787
Query: 619 IECLYLRASCYHAIGEYREAV 639
+ Y A +Y+ A+
Sbjct: 788 PINYSGQGFVYFAQKQYQAAI 808
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 5 KLLDSRYRLNK-THKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLL 63
K+L + YRL K + + ++ +++ A + + + L L + +A+ +D+ +
Sbjct: 623 KVLSAVYRLQKKPEQALTAVNSGLKIAPTDAQLLNEKYVV--LSVLYRYPEALTAIDAAI 680
Query: 64 AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
AQ+ NR + +++ ++ + ++A+++DP + AY +G +S L R +EA+
Sbjct: 681 AQAPRAAFYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAI 740
Query: 124 S 124
+
Sbjct: 741 A 741
>gi|296127458|ref|YP_003634710.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019274|gb|ADG72511.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 687
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 126/256 (49%), Gaps = 7/256 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G ++ N Y AI F++ L+ D + + RG A + E A+SDFT+A++ NP+
Sbjct: 71 GASKHNLKNYNEAIEYFNKTLELDSSFFDVYYSRGVAEYHLKFYENAVSDFTKALEVNPN 130
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ R A + + +AI+D L F+ + + RG+ F F AV+D
Sbjct: 131 LQNAYYIRALCYAKINKHKKAIEDFDTLLNSFDEINYIYYYYRGLSKFHLNLFEEAVKDF 190
Query: 507 S-ACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
A L E Y Y L+ S + + K+ + KAI++++N ++A+ + Y +
Sbjct: 191 DIAAYYLPNE---GYIYYDRALSYSKLNMFDKSIRDYTKAIEINKNEIDAYYNRASSYCE 247
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ KA+E +V+ ++ +AY+ R L + + KAI+D + ++ ++ E +Y
Sbjct: 248 IEEYYKAIEDYNKVIELNPDDDEAYYNRALTYSKIEAYDKAIEDYDKVIELNHNDKEAVY 307
Query: 624 LRASCYHAIGEYREAV 639
RA C ++ + EA+
Sbjct: 308 NRALCKQSVNLFEEAI 323
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++D+ +AI+ P E + RG A L EAI+D +KA+E PN + + RGI N
Sbjct: 490 ALNDYNKAIELEPYNYEIYGYRGNAELDLYLYKEAIEDFNKAIELNPNYDEAYYNRGIAN 549
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
K+++ A D VKL+ ++ A+ LG + EY KA E KA++++
Sbjct: 550 EALKNYDEAFRDYETTVKLNHKHDYAFNNLGSCYVKLKEYDKALENFYKALEIN 603
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 129/270 (47%), Gaps = 8/270 (2%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I +I V + L GI + +Y +++ FD ++ +P + +A RG A+ +
Sbjct: 329 IINYDNIFVYYNL--GICYLELERYEESVNNFDLFIEVNPDFADAYYYRGNAKYGLGYYD 386
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD---ILHER 489
+I D+ + ++ + +A+ R + + L EA++D +AL + + +D + +
Sbjct: 387 ESIEDYNKTLELDNVYIDAYYERAKVKIELSMYDEAMKDFDEALFYIESDSDRAYLYTLK 446
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+N K ++ A+E+ + ++L E Y + +A + G K A + KAI+L+
Sbjct: 447 ATLNEISKKYDDAIENYTNAIELGNE---CYYKMAIAKHNAGLIKDALNDYNKAIELEPY 503
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E +G+ DL ++A+E + + ++ + +AY+ RG+ L + +A +D
Sbjct: 504 NYEIYGYRGNAELDLYLYKEAIEDFNKAIELNPNYDEAYYNRGIANEALKNYDEAFRDYE 563
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + ++ + SCY + EY +A+
Sbjct: 564 TTVKLNHKHDYAFNNLGSCYVKLKEYDKAL 593
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 10/206 (4%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQIL-----KEDPMYPEALIGRGTARAFQRELE 432
++ +D R ++ Y A+ FD+ L D Y L + T ++ +
Sbjct: 400 NVYIDAYYERAKVKIELSMYDEAMKDFDEALFYIESDSDRAYLYTL--KATLNEISKKYD 457
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI ++T AI+ E + + A+ G +A+ D +KA+E EP + +I RG
Sbjct: 458 DAIENYTNAIEL---GNECYYKMAIAKHNAGLIKDALNDYNKAIELEPYNYEIYGYRGNA 514
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ A+ED + ++L+ AY G+A ++ Y +A + ++L+
Sbjct: 515 ELDLYLYKEAIEDFNKAIELNPNYDEAYYNRGIANEALKNYDEAFRDYETTVKLNHKHDY 574
Query: 553 AWGHLTQFYQDLANSEKALECLQQVL 578
A+ +L Y L +KALE + L
Sbjct: 575 AFNNLGSCYVKLKEYDKALENFYKAL 600
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 19/244 (7%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA---IQ 443
RG A+ G Y +I +++ L+ D +Y +A R + + A+ DF EA I+
Sbjct: 375 RGNAKYGLGYYDESIEDYNKTLELDNVYIDAYYERAKVKIELSMYDEAMKDFDEALFYIE 434
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF----EPNSADILHERGIVNFKFKDF 499
S+ + + + +AI++ + A+E A H G++ D+
Sbjct: 435 SDSDRAYLYTLKATLNEISKKYDDAIENYTNAIELGNECYYKMAIAKHNAGLIKDALNDY 494
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
N A+E L+ N Y Y G A + YK+A E KAI+L+ N+ EA+ +
Sbjct: 495 NKAIE-------LEPYNYEIYGYRGNAELDLYLYKEAIEDFNKAIELNPNYDEAYYNRGI 547
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID---- 615
+ L N ++A + + ++ + A++ G L ++ KA+++ L I+
Sbjct: 548 ANEALKNYDEAFRDYETTVKLNHKHDYAFNNLGSCYVKLKEYDKALENFYKALEINSELA 607
Query: 616 -PSN 618
P+N
Sbjct: 608 IPTN 611
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
S+R+++KAI I + EI NRA Y ++E + I D +K ++L+P +AY
Sbjct: 220 SIRDYTKAIEINKN------EIDAYYNRASSYCEIEEYYKAIEDYNKVIELNPDDDEAYY 273
Query: 108 LKGCAFSALGRKEEALSVWEK 128
+ +S + ++A+ ++K
Sbjct: 274 NRALTYSKIEAYDKAIEDYDK 294
>gi|189184574|ref|YP_001938359.1| TPR repeat-containing protein 08 [Orientia tsutsugamushi str.
Ikeda]
gi|189181345|dbj|BAG41125.1| TPR repeat-containing protein 08 [Orientia tsutsugamushi str.
Ikeda]
Length = 357
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 139/274 (50%), Gaps = 2/274 (0%)
Query: 366 KKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
KKF + K S + +++GIA G++ AI +D +K P EA I +G +
Sbjct: 24 KKFNLA--IKCNPYSAEAYINKGIALDKLGQHQEAIENYDIAIKYKPDSVEAYINKGISL 81
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AI ++ AI+ P + EA+ +G A LG+ EAI++ A++++P+SA+
Sbjct: 82 KQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQEAIENYDIAIKYKPDSAEA 141
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+G + + A+E+ ++ + + +AY G+AL+ +G Y++A + + AI+
Sbjct: 142 YINKGNTLMQLWQYQEAIENYDIAIRCNPNDVNAYYNKGIALNELGRYQEAIDNYDIAIK 201
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ +A+ + +L ++A+E + + KAY+ +G+ L+ L Q+++AI
Sbjct: 202 YKPDLAKAYINKGNALNELGRYQEAIENFDTGIRYNPNDEKAYYNKGISLYQLVQYQEAI 261
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ + P E + +G+++EA+
Sbjct: 262 ENCDIAIKHKPDLAEAYMNKGVALSKLGQHQEAI 295
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 124/265 (46%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K K SV+ +++GI+ G+Y AI +D +K P EA I +G A + + A
Sbjct: 65 KYKPDSVEAYINKGISLKQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQEA 124
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I ++ AI+ P + EA+ +G L + EAI++ A+ PN + + +GI
Sbjct: 125 IENYDIAIKYKPDSAEAYINKGNTLMQLWQYQEAIENYDIAIRCNPNDVNAYYNKGIALN 184
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + A+++ +K + AY G AL+ +G Y++A E I+ + N +A+
Sbjct: 185 ELGRYQEAIDNYDIAIKYKPDLAKAYINKGNALNELGRYQEAIENFDTGIRYNPNDEKAY 244
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ L ++A+E + ++AY +G+ L LGQH++AIK + +
Sbjct: 245 YNKGISLYQLVQYQEAIENCDIAIKHKPDLAEAYMNKGVALSKLGQHQEAIKKFNLAIKY 304
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
P E + +G+ +A+
Sbjct: 305 KPGFAEAYLNKGESLKQLGQREKAI 329
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 128/244 (52%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY AI F+ +K +P EA I +G A + + AI ++ AI+ P + EA+ +
Sbjct: 18 KYQEAIKKFNLAIKCNPYSAEAYINKGIALDKLGQHQEAIENYDIAIKYKPDSVEAYINK 77
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + LG+ +AI++ A++++P+SA+ +G + + A+E+ +K +
Sbjct: 78 GISLKQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQEAIENYDIAIKYKPD 137
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ AY G L + +Y++A E + AI+ + N + A+ + +L ++A++
Sbjct: 138 SAEAYINKGNTLMQLWQYQEAIENYDIAIRCNPNDVNAYYNKGIALNELGRYQEAIDNYD 197
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ +KAY +G L+ LG++++AI++ +G+ +P++ + Y + + + +Y
Sbjct: 198 IAIKYKPDLAKAYINKGNALNELGRYQEAIENFDTGIRYNPNDEKAYYNKGISLYQLVQY 257
Query: 636 REAV 639
+EA+
Sbjct: 258 QEAI 261
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 113/221 (51%), Gaps = 15/221 (6%)
Query: 427 FQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
FQ R+ + AI F AI+ NP + EA+ +G A LG+ EAI++ A++++P+S +
Sbjct: 14 FQLRKYQEAIKKFNLAIKCNPYSAEAYINKGIALDKLGQHQEAIENYDIAIKYKPDSVEA 73
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+GI + + A+++ +K ++ AY G AL+ +G+Y++A E + AI+
Sbjct: 74 YINKGISLKQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQEAIENYDIAIK 133
Query: 546 LDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ EA+ L Q+ + + N + A+ C + AY+ +G+ L+ L
Sbjct: 134 YKPDSAEAYINKGNTLMQLWQYQEAIENYDIAIRC-------NPNDVNAYYNKGIALNEL 186
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G++++AI + + P + + + + +G Y+EA+
Sbjct: 187 GRYQEAIDNYDIAIKYKPDLAKAYINKGNALNELGRYQEAI 227
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K K S + +++G A G+Y AI +D +K P EA I +G + + A
Sbjct: 99 KYKPDSAEAYINKGAALNELGQYQEAIENYDIAIKYKPDSAEAYINKGNTLMQLWQYQEA 158
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I ++ AI+ NP+ A+ +G A LG EAI + A++++P+ A +G
Sbjct: 159 IENYDIAIRCNPNDVNAYYNKGIALNELGRYQEAIDNYDIAIKYKPDLAKAYINKGNALN 218
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + A+E+ ++ + ++ AY G++L + +Y++A E AI+ + EA+
Sbjct: 219 ELGRYQEAIENFDTGIRYNPNDEKAYYNKGISLYQLVQYQEAIENCDIAIKHKPDLAEAY 278
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ L ++A++ + F++AY +G L LGQ +KAIK+ +
Sbjct: 279 MNKGVALSKLGQHQEAIKKFNLAIKYKPGFAEAYLNKGESLKQLGQREKAIKNFELAIKY 338
Query: 615 DPSNIECLYLR 625
P I Y+R
Sbjct: 339 KPGLI-APYIR 348
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 23/159 (14%)
Query: 13 LNKTHKTICEIDELVRVDSVMAS---AITARIELAK--------LCSLRNWSKAIRILDS 61
+N + ++EL R + + AI + +LAK L L + +AI D+
Sbjct: 173 VNAYYNKGIALNELGRYQEAIDNYDIAIKYKPDLAKAYINKGNALNELGRYQEAIENFDT 232
Query: 62 LLAQSYEIQD---ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGR 118
+ Y D N+ QL ++ I +CD A++ P L +AY+ KG A S LG+
Sbjct: 233 GI--RYNPNDEKAYYNKGISLYQLVQYQEAIENCDIAIKHKPDLAEAYMNKGVALSKLGQ 290
Query: 119 KEEALS------VWEKGYEHA-LHQSADLKQFLELEELL 150
+EA+ ++ G+ A L++ LKQ + E+ +
Sbjct: 291 HQEAIKKFNLAIKYKPGFAEAYLNKGESLKQLGQREKAI 329
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 46 LCSLRNWSKAIRILD-SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L L + +AI D ++ ++ N+ ++L ++ I + D A++ P L +
Sbjct: 149 LMQLWQYQEAIENYDIAIRCNPNDVNAYYNKGIALNELGRYQEAIDNYDIAIKYKPDLAK 208
Query: 105 AYILKGCAFSALGRKEEALSVWEKG 129
AYI KG A + LGR +EA+ ++ G
Sbjct: 209 AYINKGNALNELGRYQEAIENFDTG 233
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASA-ITARIELAKLC----SLRNWSKAIRI-LDS 61
+S ++L K + I + + ++ + A A I I L KL ++ N+ AI+ DS
Sbjct: 11 NSFFQLRKYQEAIKKFNLAIKCNPYSAEAYINKGIALDKLGQHQEAIENYDIAIKYKPDS 70
Query: 62 LLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
++ N+ QL ++ I++ D A++ P +AYI KG A + LG+ +E
Sbjct: 71 -------VEAYINKGISLKQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQE 123
Query: 122 ALSVWE 127
A+ ++
Sbjct: 124 AIENYD 129
>gi|148285081|ref|YP_001249171.1| hypothetical protein OTBS_2002 [Orientia tsutsugamushi str.
Boryong]
gi|146740520|emb|CAM81097.1| tetratricopeptide repeat protein with 9 trp repeats [Orientia
tsutsugamushi str. Boryong]
Length = 379
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 4/179 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA +N G +AI +D +K P Y EA I +G AF +L+ AI F AI+ +
Sbjct: 181 NKGIALMNLGDIQNAIENYDMAIKYRPNYAEAYINKGLTLAFLGQLQNAIEHFDLAIKYD 240
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS ++ +G + L EA++ + A++++PN ADI + +G++ K AVE+
Sbjct: 241 PSCVKSHCNKGYVLSLLKRYSEAVESCNLAIKYDPNCADIYYNKGMIFEKLGKHQEAVEN 300
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----GHLTQF 560
+K + Y G++L S+G+Y KA+E AI+ N + + LT+F
Sbjct: 301 FDIAIKYNPNFAENYLEKGISLVSLGQYSKAKENFNLAIKYMPNLIAEYEATIKRLTEF 359
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 6/247 (2%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY AI +D +K DP Y A +G A + + AI +F AI+ NP EA+ +
Sbjct: 55 KYHEAIKNYDIAIKYDPSYASAYNSKGIALNNLEKPKEAIENFDLAIKYNPHFAEAYNNK 114
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
+ LG++ EAI A++++PN + +G ++ A+E+ ++ +
Sbjct: 115 AVSYGKLGKNKEAIVLCDLAIKYKPNYVTAYNTKGASLNDLGEYEEAMENFDIAIRYNSS 174
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALE 572
AY G+AL ++G+ + A E + AI+ N+ EA+ G F L N A+E
Sbjct: 175 YPEAYYNKGIALMNLGDIQNAIENYDMAIKYRPNYAEAYINKGLTLAFLGQLQN---AIE 231
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+ D K++ +G +L L ++ +A++ + + DP+ + Y + + +
Sbjct: 232 HFDLAIKYDPSCVKSHCNKGYVLSLLKRYSEAVESCNLAIKYDPNCADIYYNKGMIFEKL 291
Query: 633 GEYREAV 639
G+++EAV
Sbjct: 292 GKHQEAV 298
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 105/225 (46%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK AI + D +K P Y A +G + E E A+ +F AI+ N S EA+
Sbjct: 122 GKNKEAIVLCDLAIKYKPNYVTAYNTKGASLNDLGEYEEAMENFDIAIRYNSSYPEAYYN 181
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG+ AI++ A+++ PN A+ +G+ A+E +K D
Sbjct: 182 KGIALMNLGDIQNAIENYDMAIKYRPNYAEAYINKGLTLAFLGQLQNAIEHFDLAIKYDP 241
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ G LS + Y +A E+ AI+ D N + + + ++ L ++A+E
Sbjct: 242 SCVKSHCNKGYVLSLLKRYSEAVESCNLAIKYDPNCADIYYNKGMIFEKLGKHQEAVENF 301
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ + F++ Y +G+ L LGQ+ KA ++ + + P+ I
Sbjct: 302 DIAIKYNPNFAENYLEKGISLVSLGQYSKAKENFNLAIKYMPNLI 346
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 62/127 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G+ G+ +AI FD +K DP ++ +G + + A+ AI+
Sbjct: 214 INKGLTLAFLGQLQNAIEHFDLAIKYDPSCVKSHCNKGYVLSLLKRYSEAVESCNLAIKY 273
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ + + +G LG+ EA+++ A+++ PN A+ E+GI ++ A E
Sbjct: 274 DPNCADIYYNKGMIFEKLGKHQEAVENFDIAIKYNPNFAENYLEKGISLVSLGQYSKAKE 333
Query: 505 DLSACVK 511
+ + +K
Sbjct: 334 NFNLAIK 340
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQS 66
RL K H+ I D ++ D ASA ++ I L L ++ N+ AI+ + A++
Sbjct: 52 RLKKYHEAIKNYDIAIKYDPSYASAYNSKGIALNNLEKPKEAIENFDLAIK-YNPHFAEA 110
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y N+A Y +L +K I CD A++ P + AY KG + + LG EEA+ +
Sbjct: 111 YN-----NKAVSYGKLGKNKEAIVLCDLAIKYKPNYVTAYNTKGASLNDLGEYEEAMENF 165
Query: 127 E 127
+
Sbjct: 166 D 166
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 37 ITARIELAKLCSLRNWSKAIRILDSLLAQSYE---IQDICNRAFCYSQLELHKHVIRDCD 93
I + LA L L+N AI D LA Y+ ++ CN+ + S L+ + + C+
Sbjct: 214 INKGLTLAFLGQLQN---AIEHFD--LAIKYDPSCVKSHCNKGYVLSLLKRYSEAVESCN 268
Query: 94 KALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
A++ DP Y KG F LG+ +EA+ ++
Sbjct: 269 LAIKYDPNCADIYYNKGMIFEKLGKHQEAVENFD 302
>gi|422303664|ref|ZP_16391015.1| Periplasmic protein [Microcystis aeruginosa PCC 9806]
gi|389791337|emb|CCI12846.1| Periplasmic protein [Microcystis aeruginosa PCC 9806]
Length = 260
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 10/206 (4%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLSAGDYSGAITDFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL N + L R + K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
G++ +A E + KA+ L DR F + Y E AL + L I+ F
Sbjct: 150 GKHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 205
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSS 610
++AYH RGL + LG +KAI DL +
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLET 231
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A++ G+Y AI+ + Q L + Y AL R A ++ EAA+ D T+
Sbjct: 68 ADAYYNRGYAELVLGQYERAIADYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTK 127
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKD 498
AI N + + + RG A+ LG+ +EAI+D +KAL + I + R + +
Sbjct: 128 AIALNGNFADFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A+ D + +K++ AY GL +G +KA
Sbjct: 188 QEMALRDYNESLKINANFAEAYHNRGLTHYKLGNREKA 225
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I LS P A + RG+ D++ A+ D + ++L+ ++ AY G A
Sbjct: 20 ISPLSSQTTANPVKAVEFYNRGVDRLSAGDYSGAITDFTQALQLEPKDADAYYNRGYAEL 79
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+G+Y++A + +A+ ++ N++ A G+ Y E A+E + + ++ F+ +
Sbjct: 80 VLGQYERAIADYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFF 139
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGE 634
RG LG+H +AI+D + L + + + Y RA Y+ G+
Sbjct: 140 IYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQ 187
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C I+ + + + DF + RG A+ + GK+ AI + + L + I A A+
Sbjct: 125 CTKAIALNGNFA-DFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYN 183
Query: 429 R--ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
R + E A+ D+ E+++ N + EA+ RG LG +AI DL A
Sbjct: 184 RAGQQEMALRDYNESLKINANFAEAYHNRGLTHYKLGNREKAIADLETA 232
>gi|124024557|ref|YP_001018864.1| hypothetical protein P9303_28691 [Prochlorococcus marinus str. MIT
9303]
gi|123964843|gb|ABM79599.1| Hypothetical protein P9303_28691 [Prochlorococcus marinus str. MIT
9303]
Length = 306
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 122/245 (49%), Gaps = 4/245 (1%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+++ ++S +V F RG A+ N+G Y A++ F++ ++ +P A R + +
Sbjct: 38 TQVADAQSAAV-FN-KRGYAKFNKGDYQGALAEFNKAIEINPQDAGAYTSRSGTKLNLGD 95
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A++D +AI NP A+ RG A+ LG+ AI D +KA+E P AD RG
Sbjct: 96 NQGALNDANKAIDINPQNSIAYYNRGSAKDELGDYQGAIADFNKAIEINPQDADAYLNRG 155
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ KD A+ D ++++ + AYT G A + +YK A KAI+++ +
Sbjct: 156 NAKYDLKDTQGAIADWGKAIEINPQYAGAYTNRGAAKLNSKDYKGAISDFNKAIEINPHL 215
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL-- 608
A+ + + L + + A+ ++ + I+ +++ AY G+ +G K A D
Sbjct: 216 AAAYFNRGLAKRKLGDYQGAIPDYKKAIEINPQYAAAYRNSGIAKELVGDLKGACADWKE 275
Query: 609 SSGLG 613
+S LG
Sbjct: 276 ASSLG 280
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+RG A+ G+ A+ + +KA+E P A R D A+ D + + ++
Sbjct: 51 KRGYAKFNKGDYQGALAEFNKAIEINPQDAGAYTSRSGTKLNLGDNQGALNDANKAIDIN 110
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+N AY G A +G+Y+ A KAI+++ +A+ + DL +++ A+
Sbjct: 111 PQNSIAYYNRGSAKDELGDYQGAIADFNKAIEINPQDADAYLNRGNAKYDLKDTQGAIAD 170
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + I+ +++ AY RG +K AI D + + I+P + R +G
Sbjct: 171 WGKAIEINPQYAGAYTNRGAAKLNSKDYKGAISDFNKAIEINPHLAAAYFNRGLAKRKLG 230
Query: 634 EYREAV 639
+Y+ A+
Sbjct: 231 DYQGAI 236
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D L+RG A+ + AI+ + + ++ +P Y A RG A+ ++ + AISDF +
Sbjct: 148 ADAYLNRGNAKYDLKDTQGAIADWGKAIEINPQYAGAYTNRGAAKLNSKDYKGAISDFNK 207
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ NP A+ RG A+ LG+ AI D KA+E P A GI D
Sbjct: 208 AIEINPHLAAAYFNRGLAKRKLGDYQGAIPDYKKAIEINPQYAAAYRNSGIAKELVGDLK 267
Query: 501 AAVEDLSACVKLDKENKSAYT 521
A D L ++ + +
Sbjct: 268 GACADWKEASSLGDKDAAGWV 288
>gi|449130251|ref|ZP_21766472.1| hypothetical protein HMPREF9724_01137 [Treponema denticola SP37]
gi|448943090|gb|EMB23983.1| hypothetical protein HMPREF9724_01137 [Treponema denticola SP37]
Length = 338
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI + + ++ DP Y EA + RG + E E A++DF I+ +P + +A+ +G
Sbjct: 59 AIYYYTKAIEADPAYIEAYLNRGEMYYYVDENEKALADFDRVIELSPQSDKAYYFKGLLF 118
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G AI++L+ A+ + R + K ++ A+++++A +KL+ ++
Sbjct: 119 NDTGNYNNAIENLNTAISLNDKDYEYYEARSKIYGYLKTYDKALDNINAAIKLNPKSAKL 178
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G A AI+LD N + + L Y + +A E + +++
Sbjct: 179 YNLRGRLHEHFKRTDDAVNDFKIAIKLDPNDIWPYNGLLYIYIETKKHNEAFEIVNKMIK 238
Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ + Y +RGLL GQ+K+A++D ++G+ I P N +R Y + EY++A
Sbjct: 239 MKPSWIGILYGIRGLLFSFRGQYKEAVEDCNTGIRIYPQNASLYNIRGKIYFDLKEYKKA 298
Query: 639 V 639
+
Sbjct: 299 I 299
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL--GESVEAIQDLSKALEF 478
RG + + A++DF AI+ +P+ + W G + + EA + ++K ++
Sbjct: 182 RGRLHEHFKRTDDAVNDFKIAIKLDPN--DIWPYNGLLYIYIETKKHNEAFEIVNKMIKM 239
Query: 479 EPNSADILHE-RGIVNFKFK-DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+P+ IL+ RG++ F F+ + AVED + +++ +N S Y G + EYKKA
Sbjct: 240 KPSWIGILYGIRGLL-FSFRGQYKEAVEDCNTGIRIYPQNASLYNIRGKIYFDLKEYKKA 298
Query: 537 EEAHLKAIQL 546
E AI+
Sbjct: 299 IEDFDMAIKF 308
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 12/177 (6%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+AIS+ D+ D Y EA R + + + A+ + AI+ NP + + + RG+
Sbjct: 133 TAISLNDK----DYEYYEA---RSKIYGYLKTYDKALDNINAAIKLNPKSAKLYNLRGRL 185
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGI--VNFKFKDFNAAVEDLSACVKLDKEN 516
+ +A+ D A++ +PN DI G+ + + K N A E ++ +K+
Sbjct: 186 HEHFKRTDDAVNDFKIAIKLDPN--DIWPYNGLLYIYIETKKHNEAFEIVNKMIKMKPSW 243
Query: 517 KSA-YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
Y GL S G+YK+A E I++ + + Y DL +KA+E
Sbjct: 244 IGILYGIRGLLFSFRGQYKEAVEDCNTGIRIYPQNASLYNIRGKIYFDLKEYKKAIE 300
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 442 IQSNPS-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I+ PS G + RG + G+ EA++D + + P +A + + RG + F K++
Sbjct: 237 IKMKPSWIGILYGIRGLLFSFRGQYKEAVEDCNTGIRIYPQNASLYNIRGKIYFDLKEYK 296
Query: 501 AAVEDLSACVKLDKENKS 518
A+ED +K EN++
Sbjct: 297 KAIEDFDMAIKFALENQN 314
>gi|402848922|ref|ZP_10897168.1| putative TPR repeat family protein [Rhodovulum sp. PH10]
gi|402500798|gb|EJW12464.1| putative TPR repeat family protein [Rhodovulum sp. PH10]
Length = 269
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG G+Y A++ FD+ + DP Y +A RG ++E A++D+ A++ +P
Sbjct: 50 RGSVLGQAGRYKEALADFDRAITLDPRYAQAYANRGLVYRQMGQIEPALADYDRALEIDP 109
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S A RG A G+ + A+QD +KA++ P++A + RG++ + + A++D
Sbjct: 110 SYAVAHVGRGMVHRAKGDLLAALQDFNKAIQIRPDNAQAYYNRGLLYQSQRQYQYAIDDF 169
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L ++ Y L +IG+ K A + A+Q++ ++AW Y+ +
Sbjct: 170 STAIGLSQQQAEPYVARALTYLAIGDTKAAADDLDDAVQMEPENIQAWTSRGLAYERQND 229
Query: 567 SEKALECLQQVLYIDKRFSKA 587
EKA + L + K F A
Sbjct: 230 REKAAGSYAKALALRKDFQPA 250
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 5/182 (2%)
Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++I++D R + RG+ G+ A++ +D+ L+ DP Y A +GRG + +L
Sbjct: 69 RAITLDPRYAQAYANRGLVYRQMGQIEPALADYDRALEIDPSYAVAHVGRGMVHRAKGDL 128
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
AA+ DF +AIQ P +A+ RG + + AI D S A+ A+ R +
Sbjct: 129 LAALQDFNKAIQIRPDNAQAYYNRGLLYQSQRQYQYAIDDFSTAIGLSQQQAEPYVARAL 188
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D AA +DL V+++ EN A+T GLA + +KA ++ KA+ L ++F
Sbjct: 189 TYLAIGDTKAAADDLDDAVQMEPENIQAWTSRGLAYERQNDREKAAGSYAKALALRKDFQ 248
Query: 552 EA 553
A
Sbjct: 249 PA 250
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
+S +L ++P P+A RG+ + A++DF AI +P +A+ RG
Sbjct: 30 LSSLTAVLAKNPNDPQAYNMRGSVLGQAGRYKEALADFDRAITLDPRYAQAYANRGLVYR 89
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+G+ A+ D +ALE +P+ A RG+V+ D AA++D + +++ +N AY
Sbjct: 90 QMGQIEPALADYDRALEIDPSYAVAHVGRGMVHRAKGDLLAALQDFNKAIQIRPDNAQAY 149
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
GL S +Y+ A + AI L + E +
Sbjct: 150 YNRGLLYQSQRQYQYAIDDFSTAIGLSQQQAEPY 183
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 34/203 (16%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A +S T + NP+ +A+ RG G EA+ D +A+ +P A RG+
Sbjct: 27 PANLSSLTAVLAKNPNDPQAYNMRGSVLGQAGRYKEALADFDRAITLDPRYAQAYANRGL 86
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V + A+ D +++D A+ G+ + G+ A + KAIQ
Sbjct: 87 VYRQMGQIEPALADYDRALEIDPSYAVAHVGRGMVHRAKGDLLAALQDFNKAIQ------ 140
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
I ++AY+ RGLL Q++ AI D S+
Sbjct: 141 ----------------------------IRPDNAQAYYNRGLLYQSQRQYQYAIDDFSTA 172
Query: 612 LGIDPSNIECLYLRASCYHAIGE 634
+G+ E RA Y AIG+
Sbjct: 173 IGLSQQQAEPYVARALTYLAIGD 195
>gi|338811928|ref|ZP_08624129.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
gi|337276073|gb|EGO64509.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
Length = 298
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 105/216 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G+ + Y AI+ + Q + +P Y +A RG A E + AI+D+T+ I
Sbjct: 46 FNKGLQYDSRQDYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAIADYTQVIAL 105
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AW+ RG A G+ +A+ D ++ + EP +A+ + RGI D++ A+
Sbjct: 106 APQNMDAWRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDKGDYDTAIT 165
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + L + +AY G+A + G+Y KA + + +AI L+ A+ + Y
Sbjct: 166 DYTRAIALQPKYATAYYNRGIAYKNKGDYDKAIDDYSQAIALNPRDASAYNNRANAYVMK 225
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+ +KA+ +D ++ AY+ + L G+
Sbjct: 226 GDYDKAITDYSLATTLDPDYAVAYYNQALACEKAGR 261
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+++ AI+ +++AI NP +A+ RG A GE AI D ++ + P + D
Sbjct: 55 RQDYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAIADYTQVIALAPQNMDAWR 114
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG V + D++ AV D + + L+ +N A+ G+A S G+Y A + +AI L
Sbjct: 115 SRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDKGDYDTAITDYTRAIALQ 174
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ + Y++ + +KA++ Q + ++ R + AY+ R G + KAI D
Sbjct: 175 PKYATAYYNRGIAYKNKGDYDKAIDDYSQAIALNPRDASAYNNRANAYVMKGDYDKAITD 234
Query: 608 LSSGLGIDPSNIECLYLRA 626
S +DP Y +A
Sbjct: 235 YSLATTLDPDYAVAYYNQA 253
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
D +RG A N G+Y +AI+ + Q++ P +A RG A + + + A++D+T+
Sbjct: 76 ADAYYNRGNAYKNSGEYDNAIADYTQVIALAPQNMDAWRSRGDVYAEKGDYDKAVTDYTQ 135
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I P EA RG A + G+ AI D ++A+ +P A + RGI D++
Sbjct: 136 FIALEPQNAEAHNNRGIAYSDKGDYDTAITDYTRAIALQPKYATAYYNRGIAYKNKGDYD 195
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A++D S + L+ + SAY A G+Y KA + A LD ++ A+
Sbjct: 196 KAIDDYSQAIALNPRDASAYNNRANAYVMKGDYDKAITDYSLATTLDPDYAVAY 249
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%)
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A E W +G + + +AI S+A+ P AD + RG +++ A+ D
Sbjct: 39 PGAEEHWFNKGLQYDSRQDYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAIAD 98
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L +N A+ G + G+Y KA + + I L+ EA + Y D
Sbjct: 99 YTQVIALAPQNMDAWRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDKG 158
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + A+ + + + +++ AY+ RG+ G + KAI D S + ++P + R
Sbjct: 159 DYDTAITDYTRAIALQPKYATAYYNRGIAYKNKGDYDKAIDDYSQAIALNPRDASAYNNR 218
Query: 626 ASCYHAIGEYREAV 639
A+ Y G+Y +A+
Sbjct: 219 ANAYVMKGDYDKAI 232
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D SRG +G Y A++ + Q + +P EA RG A + + + + AI+D+T
Sbjct: 109 NMDAWRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDKGDYDTAITDYT 168
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AI P A+ RG A G+ +AI D S+A+ P A + R D+
Sbjct: 169 RAIALQPKYATAYYNRGIAYKNKGDYDKAIDDYSQAIALNPRDASAYNNRANAYVMKGDY 228
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ A+ D S LD + AY LA G
Sbjct: 229 DKAITDYSLATTLDPDYAVAYYNQALACEKAG 260
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 73/161 (45%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+P + + +G+ +D+N A+ S + L+ + AY G A + GEY A
Sbjct: 38 KPGAEEHWFNKGLQYDSRQDYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAIA 97
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ + I L ++AW Y + + +KA+ Q + ++ + ++A++ RG+
Sbjct: 98 DYTQVIALAPQNMDAWRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDK 157
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G + AI D + + + P Y R Y G+Y +A+
Sbjct: 158 GDYDTAITDYTRAIALQPKYATAYYNRGIAYKNKGDYDKAI 198
>gi|332709397|ref|ZP_08429359.1| hypothetical protein LYNGBM3L_39350 [Moorea producens 3L]
gi|332351943|gb|EGJ31521.1| hypothetical protein LYNGBM3L_39350 [Moorea producens 3L]
Length = 932
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 111/235 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG+A +Y AI+ +D++++ P P++ RG A R E A+ F +
Sbjct: 671 DIWYQRGMALWELQQYQDAIASYDKVIEIKPDDPDSWYQRGLALMELRRYEGAVVAFNKV 730
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P +AW RG L +AI KALE +PN +RG+ +
Sbjct: 731 VKFKPDHYKAWLNRGMTLRRLRRYEDAIASYDKALEIQPNYHQAWVDRGVALGMLQKHEE 790
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A V++ +N A+ G+AL + Y++A + KAI+L+ + +AW +
Sbjct: 791 AFGSFDQAVQVQPDNTVAWLNRGMALDVLERYQEAVASFDKAIELNSDSHKAWNYRGSTL 850
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
L +++ALE + + L I ++ Y+ + ++ G+ A+++L + ++P
Sbjct: 851 VKLEQNDQALESINRALEIQPEYAAGYYNKAIVYSSQGRVTLAVENLEQAIELNP 905
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ +Y AI+ +D+ L+ P Y +A + RG A ++ E A F +A+Q
Sbjct: 742 LNRGMTLRRLRRYEDAIASYDKALEIQPNYHQAWVDRGVALGMLQKHEEAFGSFDQAVQV 801
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P AW RG A L EA+ KA+E +S + RG K + + A+E
Sbjct: 802 QPDNTVAWLNRGMALDVLERYQEAVASFDKAIELNSDSHKAWNYRGSTLVKLEQNDQALE 861
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
++ +++ E + Y + SS G A E +AI+L+ + E
Sbjct: 862 SINRALEIQPEYAAGYYNKAIVYSSQGRVTLAVENLEQAIELNPRYRE 909
>gi|124003389|ref|ZP_01688239.1| TPR repeat, putative [Microscilla marina ATCC 23134]
gi|123991487|gb|EAY30918.1| TPR repeat, putative [Microscilla marina ATCC 23134]
Length = 318
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 4/224 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA N G Y+ AI +++ + D + +A R AR +L A++D+ +
Sbjct: 73 GIALFNMGNYSRAIHHYNKAIALDSVLMDAYYNRANARFASDDLSGALADYNVVVAQYQD 132
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + RR L +AI+DL K + EPN++D L RG + +K K + AA +DL
Sbjct: 133 SSYVFFRRATTYMQLKRYDDAIKDLDKVIGLEPNNSDALGSRGYLLYKVKKYEAAAKDLQ 192
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQDLA 565
++L+K AY LGL ++ G+ A KA+++ N +EA+ G+ Y +
Sbjct: 193 KAIELNKRQDLAYANLGLVKAAQGDTMAAFVQLGKALEI--NVVEAYILGNRAWLYAESN 250
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+K+ + +++ L D + AY RG+ G +KA+ D +
Sbjct: 251 QLDKSWKDIEEALKYDDKSGWAYFARGVYYLKKGAAQKALDDFA 294
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V FR R + +Y AI D+++ +P +AL RG ++ EAA D +
Sbjct: 136 VFFR--RATTYMQLKRYDDAIKDLDKVIGLEPNNSDALGSRGYLLYKVKKYEAAAKDLQK 193
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI+ N A+ G +AA G+++ A L KALE A IL R + + +
Sbjct: 194 AIELNKRQDLAYANLGLVKAAQGDTMAAFVQLGKALEINVVEAYILGNRAWLYAESNQLD 253
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF--LEAW 554
+ +D+ +K D ++ AY G+ G +KA + KA +L ++ LEA+
Sbjct: 254 KSWKDIEEALKYDDKSGWAYFARGVYYLKKGAAQKALDDFAKARKLTKHLTDLEAY 309
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 114/274 (41%), Gaps = 5/274 (1%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
FC + SK V+ L +G + + +Y AI + + +K D + E G A
Sbjct: 20 FCACQSSKYDQGMVNLFL-KGNVNLKKQQYKQAIYYYTEGIKRDSSFSEIYNNLGIALFN 78
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
AI + +AI + +A+ R AR A + A+ D + + +S+ +
Sbjct: 79 MGNYSRAIHHYNKAIALDSVLMDAYYNRANARFASDDLSGALADYNVVVAQYQDSSYVFF 138
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
R + K ++ A++DL + L+ N A G L + +Y+ A + KAI+L+
Sbjct: 139 RRATTYMQLKRYDDAIKDLDKVIGLEPNNSDALGSRGYLLYKVKKYEAAAKDLQKAIELN 198
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL--RGLLLHGLGQHKKAI 605
+ A+ +L ++ A L + L I+ +AY L R L Q K+
Sbjct: 199 KRQDLAYANLGLVKAAQGDTMAAFVQLGKALEIN--VVEAYILGNRAWLYAESNQLDKSW 256
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
KD+ L D + + R Y G ++A+
Sbjct: 257 KDIEEALKYDDKSGWAYFARGVYYLKKGAAQKAL 290
>gi|20090471|ref|NP_616546.1| hypothetical protein MA1613 [Methanosarcina acetivorans C2A]
gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1885
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I+ D RG+ V +Y AI+ F++IL +DP + EAL RG A + + A+ F
Sbjct: 3 ITNDEAFQRGLDLVKRKRYEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEALDSF 62
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+A+Q P +A R+G AALG EA++ ALE P++ +I + G+ + +
Sbjct: 63 NDALQLEPGNSDALYRKGTCFAALGRFEEALEAYESALESSPDTPEIWYMMGLAFAEMER 122
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
A++ ++L E +A +G Y++A E +A+++ EAW
Sbjct: 123 AEASILCFEKALELKPEYTAACCAMGTVAGKAERYEEALEDFERALEISPRNSEAWYAKG 182
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ E ALEC ++ + + A + L+L LG++++A+ L L P+N
Sbjct: 183 LILAKIEKYENALECFDFLIREKPKDTAALEQKCLILANLGKNEEALGALEDFLKKFPAN 242
Query: 619 IECLYLRASCYHAIGEYREA 638
LY + + Y +A
Sbjct: 243 EAALYHKGILLSELSRYEDA 262
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 4/275 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+ K+ +D +RGI+ + G+ +A+ ++++ P YP+ G A
Sbjct: 571 AFAEVLKTNPEDLDALYNRGISLLRLGRNETALEYLEKVVSLSPDYPDLAYSLGVALMEL 630
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
ELE A+ F + NP E R+G+ LGE A+Q K L +P S + +
Sbjct: 631 GELEKALETFEKLAAKNPEDLEIQCRKGKLAMELGEHETALQAFEKVLLEKPGSREAWYR 690
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAY----TYLGLALSSIGEYKKAEEAHLKAI 544
+G+ + F AV+ + + +Y T G A +G + A E A+
Sbjct: 691 KGLALLNMERFEDAVKAFDEVIVRNTTKDPSYEDAGTLKGFAQMQLGNFLPALETFEGAL 750
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ + + W + Q+L E+A + L ++ FS A+ R + L GQ++ A
Sbjct: 751 EKNPDSGITWYYKGLTLQELQRQEEAARAFESALRLNPEFSDAFEYRAVCLFKTGQYETA 810
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ L + L DP N+ L RA C+ +G ++EAV
Sbjct: 811 LEALEALLENDPENLSTLNSRAICFLELGRHKEAV 845
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 114/253 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI +Y A ++LK +P + EA +G A L AI F EAI+ +P
Sbjct: 249 KGILLSELSRYEDAERTISKVLKLNPGHREAWFRKGFALVQLLRLNEAIEAFDEAIRLDP 308
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EAW + A L EA++ LE P+ +I + R + K ++F A
Sbjct: 309 AYFEAWNYKCFALMKLEVYEEALEAFDTILETYPDMEEIWYNRALALLKLQNFPEAARSF 368
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +LD N A+ G L+ G+Y++A E + ++ +F EA L
Sbjct: 369 ARVTELDPGNTDAWFQQGRLLARAGKYEEALETFDRLLEYHPDFTEAQKFRGTVLTGLGR 428
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+ALE L + L + + +GLLL +G+ + A++ + G+ P + C R
Sbjct: 429 FEEALESLTKSLEKEPENYNMWIQKGLLLLDIGKFEPALEAFENAAGLKPDDEICWMNRG 488
Query: 627 SCYHAIGEYREAV 639
+++ Y EA+
Sbjct: 489 FALYSLECYEEAL 501
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 6/261 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A + + A F ++ + DP +A +G A + E A+ F ++ +
Sbjct: 350 NRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQGRLLARAGKYEEALETFDRLLEYH 409
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA K RG LG EA++ L+K+LE EP + ++ ++G++ F A+E
Sbjct: 410 PDFTEAQKFRGTVLTGLGRFEEALESLTKSLEKEPENYNMWIQKGLLLLDIGKFEPALEA 469
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L +++ + G AL S+ Y++A EA + + L+ + W L
Sbjct: 470 FENAAGLKPDDEICWMNRGFALYSLECYEEALEAFKEGLHLNPYLEKGWNKKGIVLGKLG 529
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+E+ALE ++ + + F A+ GLLL +++KA + + L +P +++ LY R
Sbjct: 530 KTEEALEAFEEAVKLRPDFEDAWKNMGLLLFASEEYEKAEEAFAEVLKTNPEDLDALYNR 589
Query: 626 ASCYHAIG------EYREAVI 640
+G EY E V+
Sbjct: 590 GISLLRLGRNETALEYLEKVV 610
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 108/247 (43%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N GK A+ + LK+ P AL +G + E A ++ ++ NP EAW
Sbjct: 221 NLGKNEEALGALEDFLKKFPANEAALYHKGILLSELSRYEDAERTISKVLKLNPGHREAW 280
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
R+G A L EAI+ +A+ +P + + + K + + A+E ++
Sbjct: 281 FRKGFALVQLLRLNEAIEAFDEAIRLDPAYFEAWNYKCFALMKLEVYEEALEAFDTILET 340
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ + + LAL + + +A + + +LD +AW + E+ALE
Sbjct: 341 YPDMEEIWYNRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQGRLLARAGKYEEALE 400
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
++L F++A RG +L GLG+ ++A++ L+ L +P N + I
Sbjct: 401 TFDRLLEYHPDFTEAQKFRGTVLTGLGRFEEALESLTKSLEKEPENYNMWIQKGLLLLDI 460
Query: 633 GEYREAV 639
G++ A+
Sbjct: 461 GKFEPAL 467
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 15/245 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAISDFTEAI 442
G+AQ+ +Y A F++IL+++P Y L+ RG + E A+ F +A+
Sbjct: 1462 GLAQLKTRRYEDAFDTFEKILEKNPTDADVWYLSGLVMRGLDQN-----EEAVEVFEKAL 1516
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP+ A +++G AL EA AL P + DIL+ R + ++K DF A
Sbjct: 1517 ELNPALTAALEQKGLGLLALCRYEEARDAFGSALALNPENVDILYSRAVASYKLLDFEEA 1576
Query: 503 VEDLSACV----KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+DL + K+ Y LG+A + +Y++A +A ++ + +A ++
Sbjct: 1577 SKDLERLLLFAPGFPDYTKACYM-LGIASIELQDYERALQALDLVLEREPAHRDALYNMA 1635
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+L E+A +Q+L ++ + GL L L K+A+K +P N
Sbjct: 1636 LVLFNLEEYEEAARTFEQLLEASPEDPESLNYLGLCLLELEDLKEALKAFEKAALFNPKN 1695
Query: 619 IECLY 623
E LY
Sbjct: 1696 EEALY 1700
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ FD IL+ P E R A + A F + +P +AW ++G
Sbjct: 327 YEEALEAFDTILETYPDMEEIWYNRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQG 386
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ A G+ EA++ + LE+ P+ + RG V F A+E L+ ++ + EN
Sbjct: 387 RLLARAGKYEEALETFDRLLEYHPDFTEAQKFRGTVLTGLGRFEEALESLTKSLEKEPEN 446
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ + GL L IG+++ A EA A L + W + L E+ALE ++
Sbjct: 447 YNMWIQKGLLLLDIGKFEPALEAFENAAGLKPDDEICWMNRGFALYSLECYEEALEAFKE 506
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQ 600
L+++ K ++ +G++L LG+
Sbjct: 507 GLHLNPYLEKGWNKKGIVLGKLGK 530
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 110/244 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ F++ L+ P EA +G A + E A+ F I+ P A +++
Sbjct: 156 RYEEALEDFERALEISPRNSEAWYAKGLILAKIEKYENALECFDFLIREKPKDTAALEQK 215
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A LG++ EA+ L L+ P + L+ +GI+ + + A +S +KL+
Sbjct: 216 CLILANLGKNEEALGALEDFLKKFPANEAALYHKGILLSELSRYEDAERTISKVLKLNPG 275
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
++ A+ G AL + +A EA +AI+LD + EAW + L E+ALE
Sbjct: 276 HREAWFRKGFALVQLLRLNEAIEAFDEAIRLDPAYFEAWNYKCFALMKLEVYEEALEAFD 335
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+L + ++ R L L L +A + + +DP N + + + G+Y
Sbjct: 336 TILETYPDMEEIWYNRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQGRLLARAGKY 395
Query: 636 REAV 639
EA+
Sbjct: 396 EEAL 399
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 119/270 (44%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
R+++ + D +G GKY A+ FD++L+ P + EA RGT
Sbjct: 368 FARVTELDPGNTDAWFQQGRLLARAGKYEEALETFDRLLEYHPDFTEAQKFRGTVLTGLG 427
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E A+ T++++ P W ++G +G+ A++ A +P+ R
Sbjct: 428 RFEEALESLTKSLEKEPENYNMWIQKGLLLLDIGKFEPALEAFENAAGLKPDDEICWMNR 487
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + + + A+E + L+ + + G+ L +G+ ++A EA +A++L +
Sbjct: 488 GFALYSLECYEEALEAFKEGLHLNPYLEKGWNKKGIVLGKLGKTEEALEAFEEAVKLRPD 547
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
F +AW ++ EKA E +VL + A + RG+ L LG+++ A++ L
Sbjct: 548 FEDAWKNMGLLLFASEEYEKAEEAFAEVLKTNPEDLDALYNRGISLLRLGRNETALEYLE 607
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + P + Y +GE +A+
Sbjct: 608 KVVSLSPDYPDLAYSLGVALMELGELEKAL 637
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 22/275 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-- 443
S GIA + GK A +F +IL+ P + +A G+G Q + A+ F +A+
Sbjct: 1373 SAGIALMGLGKQEEAFEVFSEILEVYPDFKKAWYGKGLVLFSQERYDEALEAFEQALMES 1432
Query: 444 -----------------SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
S+P +AW + G A+ +A K LE P AD+
Sbjct: 1433 PYEVAKIEESEIEKSKISDPELEDAWTKIGLAQLKTRRYEDAFDTFEKILEKNPTDADVW 1492
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ G+V AVE ++L+ +A GL L ++ Y++A +A A+ L
Sbjct: 1493 YLSGLVMRGLDQNEEAVEVFEKALELNPALTAALEQKGLGLLALCRYEEARDAFGSALAL 1552
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF---SKAYHLRGLLLHGLGQHKK 603
+ ++ L + E+A + L+++L F +KA ++ G+ L +++
Sbjct: 1553 NPENVDILYSRAVASYKLLDFEEASKDLERLLLFAPGFPDYTKACYMLGIASIELQDYER 1612
Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
A++ L L +P++ + LY A + EY EA
Sbjct: 1613 ALQALDLVLEREPAHRDALYNMALVLFNLEEYEEA 1647
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 40/271 (14%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQI-------------------LKEDPMYPEALIGRGT 423
FRL GI G+Y A +F+ I K+ P+Y +G
Sbjct: 870 FRL--GIEYFELGRYDEAFPLFEGINEEVKAKNGEASGEESENSHKDSPLY-----WKGL 922
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--- 480
Q E A+ F++ + NP E W G + + LG+ EA + L KALE +P
Sbjct: 923 MFIRQEAYEKALEIFSKLTEQNPQFAEGWYFIGMSCSKLGKHEEASKALKKALEIDPAFR 982
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN--------KSAYTYLGLALSSIGE 532
+ DI + G+ F+ +F A++ + EN + L+L +G
Sbjct: 983 DLHDIYYRLGLSCFELGNFEEALKAFEEALSTVPENSERNPDEAQDIMYKKSLSLLRLGR 1042
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y +AE + + LD EA HL+ + ++ALE ++VL + +G
Sbjct: 1043 YAEAESGFKEVLALDPANTEALAHLSTACFKKGHYKEALEIFERVLSQNPARKTILFRKG 1102
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L L G++ +A++ L + P +C Y
Sbjct: 1103 LALKAFGKNLEALEAFDLVLKLKP---DCTY 1130
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 125/302 (41%), Gaps = 9/302 (2%)
Query: 340 DSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYAS 399
D SR+ S+K +E S + +R F +K+ + GIA + Y
Sbjct: 1558 DILYSRAVASYKLLDFEEASKDLERLLLFAPGFPDYTKACYM-----LGIASIELQDYER 1612
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ D +L+ +P + +AL E E A F + ++++P E+ G
Sbjct: 1613 ALQALDLVLEREPAHRDALYNMALVLFNLEEYEEAARTFEQLLEASPEDPESLNYLGLCL 1672
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L + EA++ KA F P + + L+ K ++ +++ EN A
Sbjct: 1673 LELEDLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRIQESLGYFDRILEISPENYDA 1732
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALECLQQV 577
Y G+A + +Y++A ++ ++ D N ++A ++ F Q L E A ++
Sbjct: 1733 MNYKGVAFCMLEQYREALKSFDNVLKKDPNNIKAVYNVGVVCFKQKL--YETAARAFKEA 1790
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
L I+ + GL L G ++ A+K L I P + + + R + +Y E
Sbjct: 1791 LTINPWHEPSLRYLGLSLAKTGDYEDALKAFEKLLRIKPQDPQAMNYRGVLLGKLEKYGE 1850
Query: 638 AV 639
A+
Sbjct: 1851 AI 1852
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 10/235 (4%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+ N +Y A F+Q+L+ P PE+L G +L+ A+ F +A NP
Sbjct: 1635 ALVLFNLEEYEEAARTFEQLLEASPEDPESLNYLGLCLLELEDLKEALKAFEKAALFNPK 1694
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA L E++ + LE P + D ++ +G+ + + A++
Sbjct: 1695 NEEALYNAATTLIKLNRIQESLGYFDRILEISPENYDAMNYKGVAFCMLEQYREALKSFD 1754
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA-- 565
+K D N A +G+ Y+ A A +A+ ++ W + Y L+
Sbjct: 1755 NVLKKDPNNIKAVYNVGVVCFKQKLYETAARAFKEALTIN-----PWHEPSLRYLGLSLA 1809
Query: 566 ---NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ E AL+ +++L I + +A + RG+LL L ++ +AIK L I P+
Sbjct: 1810 KTGDYEDALKAFEKLLRIKPQDPQAMNYRGVLLGKLEKYGEAIKAFDEVLSIYPN 1864
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 112/255 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G+ ++ GK+ A+ F+ P + RG A E A+ F E +
Sbjct: 451 IQKGLLLLDIGKFEPALEAFENAAGLKPDDEICWMNRGFALYSLECYEEALEAFKEGLHL 510
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + W ++G LG++ EA++ +A++ P+ D G++ F +++ A E
Sbjct: 511 NPYLEKGWNKKGIVLGKLGKTEEALEAFEEAVKLRPDFEDAWKNMGLLLFASEEYEKAEE 570
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +K + E+ A G++L +G + A E K + L ++ + L +L
Sbjct: 571 AFAEVLKTNPEDLDALYNRGISLLRLGRNETALEYLEKVVSLSPDYPDLAYSLGVALMEL 630
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
EKALE +++ + + +G L LG+H+ A++ L P + E Y
Sbjct: 631 GELEKALETFEKLAAKNPEDLEIQCRKGKLAMELGEHETALQAFEKVLLEKPGSREAWYR 690
Query: 625 RASCYHAIGEYREAV 639
+ + + +AV
Sbjct: 691 KGLALLNMERFEDAV 705
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 15/249 (6%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
AQ+ G Y A+ +++++E G A + E A F+E ++ P
Sbjct: 1343 AQIELGHYEEALLPLEKLIREGLASKGTFYSAGIALMGLGKQEEAFEVFSEILEVYPDFK 1402
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+AW +G + EA++ +AL P + E I K D
Sbjct: 1403 KAWYGKGLVLFSQERYDEALEAFEQALMESPYEVAKIEESEIEKSKISD----------- 1451
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
E + A+T +GLA Y+ A + K ++ + + W + L +E+
Sbjct: 1452 ----PELEDAWTKIGLAQLKTRRYEDAFDTFEKILEKNPTDADVWYLSGLVMRGLDQNEE 1507
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
A+E ++ L ++ + A +GL L L ++++A S L ++P N++ LY RA
Sbjct: 1508 AVEVFEKALELNPALTAALEQKGLGLLALCRYEEARDAFGSALALNPENVDILYSRAVAS 1567
Query: 630 HAIGEYREA 638
+ + ++ EA
Sbjct: 1568 YKLLDFEEA 1576
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQIL----KEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+G+A +N ++ A+ FD+++ +DP Y +A +G A+ A+ F A+
Sbjct: 691 KGLALLNMERFEDAVKAFDEVIVRNTTKDPSYEDAGTLKGFAQMQLGNFLPALETFEGAL 750
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP +G W +G L EA + AL P +D R + FK + A
Sbjct: 751 EKNPDSGITWYYKGLTLQELQRQEEAARAFESALRLNPEFSDAFEYRAVCLFKTGQYETA 810
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
+E L A ++ D EN S + +G +K+A EA
Sbjct: 811 LEALEALLENDPENLSTLNSRAICFLELGRHKEAVEA 847
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 3/240 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ + +Y A F L +P + L R A + E A D + P
Sbjct: 1529 KGLGLLALCRYEEARDAFGSALALNPENVDILYSRAVASYKLLDFEEASKDLERLLLFAP 1588
Query: 447 SAGEAWK---RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+ K G A L + A+Q L LE EP D L+ +V F +++ A
Sbjct: 1589 GFPDYTKACYMLGIASIELQDYERALQALDLVLEREPAHRDALYNMALVLFNLEEYEEAA 1648
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
++ E+ + YLGL L + + K+A +A KA + EA +
Sbjct: 1649 RTFEQLLEASPEDPESLNYLGLCLLELEDLKEALKAFEKAALFNPKNEEALYNAATTLIK 1708
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L +++L ++L I A + +G+ L Q+++A+K + L DP+NI+ +Y
Sbjct: 1709 LNRIQESLGYFDRILEISPENYDAMNYKGVAFCMLEQYREALKSFDNVLKKDPNNIKAVY 1768
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 93/222 (41%), Gaps = 42/222 (18%)
Query: 426 AFQREL--------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
AFQR L E AI+ F + + +P EA RG A ++ EA+ + AL+
Sbjct: 8 AFQRGLDLVKRKRYEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEALDSFNDALQ 67
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
EP ++D L+ +G C +++G +++A
Sbjct: 68 LEPGNSDALYRKG-----------------TC-----------------FAALGRFEEAL 93
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
EA+ A++ + E W + + ++ +E ++ C ++ L + ++ A G +
Sbjct: 94 EAYESALESSPDTPEIWYMMGLAFAEMERAEASILCFEKALELKPEYTAACCAMGTVAGK 153
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++++A++D L I P N E Y + I +Y A+
Sbjct: 154 AERYEEALEDFERALEISPRNSEAWYAKGLILAKIEKYENAL 195
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A + Y A+ F + L +P + +G + E A+ F EA++
Sbjct: 485 MNRGFALYSLECYEEALEAFKEGLHLNPYLEKGWNKKGIVLGKLGKTEEALEAFEEAVKL 544
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +AWK G A E +A + ++ L+ P D L+ RGI + A+E
Sbjct: 545 RPDFEDAWKNMGLLLFASEEYEKAEEAFAEVLKTNPEDLDALYNRGISLLRLGRNETALE 604
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
L V L + LG+AL +GE +KA E K + LE + +L
Sbjct: 605 YLEKVVSLSPDYPDLAYSLGVALMELGELEKALETFEKLAAKNPEDLEIQCRKGKLAMEL 664
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E AL+ ++VL +A++ +GL L + + + A+K
Sbjct: 665 GEHETALQAFEKVLLEKPGSREAWYRKGLALLNMERFEDAVK 706
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 107/240 (44%), Gaps = 4/240 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + ++ + G+YA A S F ++L DP EAL TA + + A+ F
Sbjct: 1028 DIMYKKSLSLLRLGRYAEAESGFKEVLALDPANTEALAHLSTACFKKGHYKEALEIFERV 1087
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ NP+ R+G A A G+++EA++ L+ +P+ L ++G F+ + +
Sbjct: 1088 LSQNPARKTILFRKGLALKAFGKNLEALEAFDLVLKLKPDCTYALDQKGYTLFELEKYEE 1147
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQ 559
A E A ++ +N LAL + +K+A + KA L + + + L+
Sbjct: 1148 AAEAFKAALEYSPKNADMQYLRALALFRLRNFKEAMQEFEKAFDLGCRKPEISYYTGLSC 1207
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
F + + A++ VL + + R L L LG+ ++A+ ++S L N+
Sbjct: 1208 F--ETGDYAGAIKAFDIVLRAGIQEPEILQKRALALFELGKAEEAVSAVNSLLEFSAENL 1265
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 106/287 (36%), Gaps = 38/287 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI GK A+ F++ +K P + +A G E E A F E +++NP
Sbjct: 521 KGIVLGKLGKTEEALEAFEEAVKLRPDFEDAWKNMGLLLFASEEYEKAEEAFAEVLKTNP 580
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A RG + LG + A++ L K + P+ D+ + G+ + + A+E
Sbjct: 581 EDLDALYNRGISLLRLGRNETALEYLEKVVSLSPDYPDLAYSLGVALMELGELEKALETF 640
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------------ 554
+ E+ G +GE++ A +A K + EAW
Sbjct: 641 EKLAAKNPEDLEIQCRKGKLAMELGEHETALQAFEKVLLEKPGSREAWYRKGLALLNMER 700
Query: 555 -------------------------GHLTQFYQ-DLANSEKALECLQQVLYIDKRFSKAY 588
G L F Q L N ALE + L + +
Sbjct: 701 FEDAVKAFDEVIVRNTTKDPSYEDAGTLKGFAQMQLGNFLPALETFEGALEKNPDSGITW 760
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ +GL L L + ++A + S L ++P + RA C G+Y
Sbjct: 761 YYKGLTLQELQRQEEAARAFESALRLNPEFSDAFEYRAVCLFKTGQY 807
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 86/186 (46%), Gaps = 8/186 (4%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
L D +++ K+++ + K+ ++ + + K + ++E+ R + IS
Sbjct: 1675 LEDLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRIQESLGYFDR-----ILEISPEN 1729
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+++++ G+A +Y A+ FD +LK+DP +A+ G Q+ E A
Sbjct: 1730 YDAMNYK---GVAFCMLEQYREALKSFDNVLKKDPNNIKAVYNVGVVCFKQKLYETAARA 1786
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F EA+ NP + + G + A G+ +A++ K L +P ++ RG++ K +
Sbjct: 1787 FKEALTINPWHEPSLRYLGLSLAKTGDYEDALKAFEKLLRIKPQDPQAMNYRGVLLGKLE 1846
Query: 498 DFNAAV 503
+ A+
Sbjct: 1847 KYGEAI 1852
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
+L + ++ I DE +R+D A + L L + +A+ D++L ++++
Sbjct: 289 QLLRLNEAIEAFDEAIRLDPAYFEAWNYKC--FALMKLEVYEEALEAFDTILETYPDMEE 346
Query: 72 IC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
I NRA +L+ R + +LDP A+ +G + G+ EEAL +++
Sbjct: 347 IWYNRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQGRLLARAGKYEEALETFDRLL 406
Query: 131 EH 132
E+
Sbjct: 407 EY 408
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L + + KAI + +L + + ++ + +R + E + + + ALQL+P
Sbjct: 15 LVKRKRYEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEALDSFNDALQLEPGNSD 74
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
A KG F+ALGR EEAL + YE AL S D
Sbjct: 75 ALYRKGTCFAALGRFEEAL----EAYESALESSPD 105
>gi|443329565|ref|ZP_21058150.1| TPR repeat-containing protein [Xenococcus sp. PCC 7305]
gi|442790903|gb|ELS00405.1| TPR repeat-containing protein [Xenococcus sp. PCC 7305]
Length = 486
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 139/275 (50%), Gaps = 12/275 (4%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGK-YASAISIFDQILKEDPMY-------PEALIGRGTAR 425
S+++ I V+ R I++ N GK Y + I + + + ++ P+ + G +
Sbjct: 182 SEARLIGVNGRF---ISEGNTGKVYGAGIPLEIYLAERGNLFISTNITLPQDFVSLGRRK 238
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q++ AI++F A+ SN + ++ RG+A L + A +D L+ +PN+ +
Sbjct: 239 LKQKDYRGAIAEFNRALASNINDLDSLSGRGEAYLILKDYSMANKDFDAVLQRDPNNINA 298
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L RG+ ++ + A+ D S + ++ + AY G +S E+ KA + + I+
Sbjct: 299 LLYRGVTYMISEEKDKAIIDFSQAISINPDFGLAYLLRGTIYASRKEFDKAIADYQEPIR 358
Query: 546 LDRNF-LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
L +F + ++ L + +L +KA+ + + + + ++ Y RGL+ + L ++ KA
Sbjct: 359 LGSDFAVASYSFLGMLHMNLEEYDKAIGYYTEAISFNPKITEIYLSRGLIYYRLEEYNKA 418
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I D + G+ +DPS+ + LR Y+ +G+ ++A+
Sbjct: 419 IADCTKGISVDPSSADAYVLRGLSYNDLGDEKKAI 453
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 6/248 (2%)
Query: 362 AKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
A+R F T I+ + DF +S G ++ + Y AI+ F++ L + ++L GR
Sbjct: 214 AERGNLFISTNITLPQ----DF-VSLGRRKLKQKDYRGAIAEFNRALASNINDLDSLSGR 268
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A ++ A DF +Q +P+ A RG E +AI D S+A+ P+
Sbjct: 269 GEAYLILKDYSMANKDFDAVLQRDPNNINALLYRGVTYMISEEKDKAIIDFSQAISINPD 328
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA-YTYLGLALSSIGEYKKAEEAH 540
RG + K+F+ A+ D ++L + A Y++LG+ ++ EY KA +
Sbjct: 329 FGLAYLLRGTIYASRKEFDKAIADYQEPIRLGSDFAVASYSFLGMLHMNLEEYDKAIGYY 388
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI + E + Y L KA+ + + +D + AY LRGL + LG
Sbjct: 389 TEAISFNPKITEIYLSRGLIYYRLEEYNKAIADCTKGISVDPSSADAYVLRGLSYNDLGD 448
Query: 601 HKKAIKDL 608
KKAI D
Sbjct: 449 EKKAIDDF 456
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 40/225 (17%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG A + Y+ A FD +L+ DP AL+ RG E + AI DF++AI N
Sbjct: 267 GRGEAYLILKDYSMANKDFDAVLQRDPNNINALLYRGVTYMISEEKDKAIIDFSQAISIN 326
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDL--------------------------------- 472
P G A+ RG A+ E +AI D
Sbjct: 327 PDFGLAYLLRGTIYASRKEFDKAIADYQEPIRLGSDFAVASYSFLGMLHMNLEEYDKAIG 386
Query: 473 --SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
++A+ F P +I RG++ ++ +++N A+ D + + +D + AY GL+ + +
Sbjct: 387 YYTEAISFNPKITEIYLSRGLIYYRLEEYNKAIADCTKGISVDPSSADAYVLRGLSYNDL 446
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
G+ KKA + KA L + G TQ YQ+ ++ + L+ +
Sbjct: 447 GDEKKAIDDFQKAADL----YQKQGD-TQLYQEAMDTIRDLQLYE 486
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 18 KTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI-CNRA 76
K I + E +R+ S A A + + + + +L + KAI ++ + +I +I +R
Sbjct: 348 KAIADYQEPIRLGSDFAVASYSFLGMLHM-NLEEYDKAIGYYTEAISFNPKITEIYLSRG 406
Query: 77 FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQ 136
Y +LE + I DC K + +DP+ AY+L+G +++ LG +++A+ ++K
Sbjct: 407 LIYYRLEEYNKAIADCTKGISVDPSSADAYVLRGLSYNDLGDEKKAIDDFQK-------- 458
Query: 137 SADLKQ 142
+ADL Q
Sbjct: 459 AADLYQ 464
>gi|428313677|ref|YP_007124654.1| hypothetical protein Mic7113_5616 [Microcoleus sp. PCC 7113]
gi|428255289|gb|AFZ21248.1| hypothetical protein Mic7113_5616 [Microcoleus sp. PCC 7113]
Length = 1041
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 117/253 (46%), Gaps = 1/253 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q G Y A+S FD+ L +P A I RG A + E AI AI+ NP+
Sbjct: 11 GLQQFQAGDYQGAMSSFDEALAINPNNHHAWIYRGVALIQLKRYEEAIFSLESAIKINPN 70
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDL 506
AW R A +LG EA+ ++ALE +P+ + RG I+ F + A+
Sbjct: 71 NHHAWCNRSSALQSLGLYQEALTSSNRALELDPDCPTLWKIRGCILANAFGHYEEALNCF 130
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + + + G LS + +++A +++ +A+ ++ N + W Q+L
Sbjct: 131 NCFLVFNANDSEVWRNHGTVLSHLERHEEALDSYSRALAINPNEYKTWRDQGALLQELNF 190
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A+ L ++ K ++ +G LL L ++K+AI L I+P+ E R
Sbjct: 191 YEEAIASYDNALALNSDDYKLWNNQGFLLMRLERYKEAISSYDHALLINPNVSEVWSNRG 250
Query: 627 SCYHAIGEYREAV 639
+G Y EA+
Sbjct: 251 FALWKLGRYEEAI 263
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 6/264 (2%)
Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D++L ++G + +Y AIS +D L +P E RG A E AIS +
Sbjct: 208 DYKLWNNQGFLLMRLERYKEAISSYDHALLINPNVSEVWSNRGFALWKLGRYEEAISSYD 267
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A+ NP+ E W RG A LG EA+ AL PN + + RG +
Sbjct: 268 YALSINPNVSEVWSNRGFALWKLGRYEEAVSSFDHALLINPNDSLVWSNRGSALDDLNRY 327
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ + LD EN SA+ G AL + +Y++A + +A+ L+ N E W +
Sbjct: 328 EEAISSWDRALSLDPENTSAWYGRGNALEDLEQYEEAIASWDRALTLNPNLPECWTNRGV 387
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHL---RGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ L E+A+ L + F +AY+ RG L L ++++AI L L +
Sbjct: 388 LLRKLGRYEEAIASFDHALSQNPNFPEAYNAWNSRGGSLADLERYEEAIPCLDRALCLTN 447
Query: 617 SNIECLYL-RASCYHAIGEYREAV 639
+ + +L R + + Y A+
Sbjct: 448 NQMWSAWLNRGMAFFNLHSYEAAL 471
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 103/245 (42%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y A++ F+ L + E GT + E A+ ++ A+ NP+ + W+
Sbjct: 121 GHYEEALNCFNCFLVFNANDSEVWRNHGTVLSHLERHEEALDSYSRALAINPNEYKTWRD 180
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G L EAI AL + + + +G + + + + A+ + ++
Sbjct: 181 QGALLQELNFYEEAIASYDNALALNSDDYKLWNNQGFLLMRLERYKEAISSYDHALLINP 240
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ G AL +G Y++A ++ A+ ++ N E W + L E+A+
Sbjct: 241 NVSEVWSNRGFALWKLGRYEEAISSYDYALSINPNVSEVWSNRGFALWKLGRYEEAVSSF 300
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
L I+ S + RG L L ++++AI L +DP N Y R + + +
Sbjct: 301 DHALLINPNDSLVWSNRGSALDDLNRYEEAISSWDRALSLDPENTSAWYGRGNALEDLEQ 360
Query: 635 YREAV 639
Y EA+
Sbjct: 361 YEEAI 365
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+ + A+ N + W +G L EAI AL PN +++ RG
Sbjct: 192 EEAIASYDNALALNSDDYKLWNNQGFLLMRLERYKEAISSYDHALLINPNVSEVWSNRGF 251
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+K + A+ + ++ ++ G AL +G Y++A + A+ ++ N
Sbjct: 252 ALWKLGRYEEAISSYDYALSINPNVSEVWSNRGFALWKLGRYEEAVSSFDHALLINPNDS 311
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
W + DL E+A+ + L +D + A++ RG L L Q+++AI
Sbjct: 312 LVWSNRGSALDDLNRYEEAISSWDRALSLDPENTSAWYGRGNALEDLEQYEEAIASWDRA 371
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
L ++P+ EC R +G Y EA+
Sbjct: 372 LTLNPNLPECWTNRGVLLRKLGRYEEAI 399
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W G + G+ A+ +AL PN+ RG+ + K + A+ L + +K
Sbjct: 7 WFNLGLQQFQAGDYQGAMSSFDEALAINPNNHHAWIYRGVALIQLKRYEEAIFSLESAIK 66
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANS- 567
++ N A+ AL S+G Y++A + +A++LD + W G + LAN+
Sbjct: 67 INPNNHHAWCNRSSALQSLGLYQEALTSSNRALELDPDCPTLWKIRGCI------LANAF 120
Query: 568 ---EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+AL C L + S+ + G +L L +H++A+ S L I+P+ +
Sbjct: 121 GHYEEALNCFNCFLVFNANDSEVWRNHGTVLSHLERHEEALDSYSRALAINPNEYKTWRD 180
Query: 625 RASCYHAIGEYREAV 639
+ + + Y EA+
Sbjct: 181 QGALLQELNFYEEAI 195
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG---RGTARAFQRELEAAISDFTEAI 442
+RG+ G+Y AI+ FD L ++P +PEA RG + A E AI A+
Sbjct: 384 NRGVLLRKLGRYEEAIASFDHALSQNPNFPEAYNAWNSRGGSLADLERYEEAIPCLDRAL 443
Query: 443 -QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNF 494
+N AW RG A L A+Q+ ++ L+F +P GI+N+
Sbjct: 444 CLTNNQMWSAWLNRGMAFFNLHSYEAALQNYNEGLQFLQPKMPGYQEGCGILNY 497
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 38 TARIELAKLCSLRNWSKAIRILDSLLAQS---YEIQDICNRAFCYSQLELHKHVIRDCDK 94
T R + A L L + +AI D+ LA + Y++ + N+ F +LE +K I D
Sbjct: 177 TWRDQGALLQELNFYEEAIASYDNALALNSDDYKLWN--NQGFLLMRLERYKEAISSYDH 234
Query: 95 ALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
AL ++P + + + +G A LGR EEA+S Y++AL
Sbjct: 235 ALLINPNVSEVWSNRGFALWKLGRYEEAIS----SYDYAL 270
>gi|428223874|ref|YP_007107971.1| hypothetical protein GEI7407_0418 [Geitlerinema sp. PCC 7407]
gi|427983775|gb|AFY64919.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
PCC 7407]
Length = 267
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 2/195 (1%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P RG A + + EAAI+D++EAI+ P EA+ RG A A LG A QD S+
Sbjct: 45 PGEFFVRGMYLAQEGKTEAAIADWSEAIRLAPEFTEAYYNRGLAYAQLGRYDRAEQDFSR 104
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
AL P D RG+V D A+ D + ++LD ++ S+Y G + Y+
Sbjct: 105 ALLLNPRLGDAYDNRGVVRAARGDAPGAIADFTTALRLDPQDASSYYNRGNVYDEMERYQ 164
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A + +AI+L + A+ + L N A+E Q + ID + AY+ RG +
Sbjct: 165 RAIADYDEAIRLSPAYTSAYNSRGRVRLALENFAGAIEDFSQAIEIDPENAIAYYSRG-V 223
Query: 595 LHGLGQHKK-AIKDL 608
+HGL +++ AI DL
Sbjct: 224 VHGLMENRPSAIADL 238
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A G+Y A F + L +P +A RG RA + + AI+DFT A++ +
Sbjct: 84 NRGLAYAQLGRYDRAEQDFSRALLLNPRLGDAYDNRGVVRAARGDAPGAIADFTTALRLD 143
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P ++ RG + AI D +A+ P + RG V ++F A+ED
Sbjct: 144 PQDASSYYNRGNVYDEMERYQRAIADYDEAIRLSPAYTSAYNSRGRVRLALENFAGAIED 203
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S +++D EN AY G+ + + E + + A LE L Q Q
Sbjct: 204 FSQAIEIDPENAIAYYSRGV-VHGLMENRPSAIAD----------LEKAADLFQRQQQPE 252
Query: 566 NSEKALECLQQV 577
N ++AL+ LQ++
Sbjct: 253 NYQRALDKLQEL 264
>gi|119590337|gb|EAW69931.1| tetratricopeptide repeat domain 13, isoform CRA_c [Homo sapiens]
Length = 678
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 15/219 (6%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG
Sbjct: 9 ELALFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGT 67
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN-- 549
+ F +D+ A ED ++L+K A Y GL G K E+ Q RN
Sbjct: 68 LYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKNEVESCAVIRQEPRNQR 127
Query: 550 ---------FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
F E W +L N E A E Q+ L +++ + LRG++L+ G
Sbjct: 128 LLKAEEKSDFEELW---RPSMLELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGS 184
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++A+K+ L ++P N C Y++ + A+G++ E +
Sbjct: 185 LQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGI 223
>gi|75907774|ref|YP_322070.1| TPR repeat-containing serine/threonine protein kinase [Anabaena
variabilis ATCC 29413]
gi|75701499|gb|ABA21175.1| serine/threonine protein kinase with TPR repeats [Anabaena
variabilis ATCC 29413]
Length = 707
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 117/244 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+S + + + P Y A G+G ++ + A++ + +AIQ P EAW R
Sbjct: 344 RYKDALSAYKKAVDIRPDYAPAWYGKGKTLFRLKQYQDALTAYDKAIQIQPDYVEAWSGR 403
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + +L EAI KAL+ N ++ + RG K ++ A++ ++ +
Sbjct: 404 GFSLQSLQRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDRAIKSYDKAIEFKSD 463
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
++ GLAL S+ EY +A A+ KAI++ ++ AW +L +L E A +
Sbjct: 464 AYESFYNKGLALQSLKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYEDAFKAYD 523
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + ++ A+ +G +L L ++ +AI+ + + +P++ + Y + H Y
Sbjct: 524 KAVQYKTDYAIAWLSKGNVLIILRRYPEAIESFNQVIKFNPNSYQAWYGKGWSQHQNQRY 583
Query: 636 REAV 639
EA+
Sbjct: 584 AEAI 587
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 34/253 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + + +YA AI+ FD+ L+ + YPE RG A + ++ + AI + +AI+
Sbjct: 403 RGFSLQSLQRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDRAIKSYDKAIEFKS 462
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A E++ +G A +L E EAI +KA+E + + +ER N
Sbjct: 463 DAYESFYNKGLALQSLKEYNEAINAYNKAIEIKSD-----YERAWYN------------- 504
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
LG +L ++ Y+ A +A+ KA+Q ++ AW L
Sbjct: 505 ----------------LGNSLVNLNRYEDAFKAYDKAVQYKTDYAIAWLSKGNVLIILRR 548
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+E QV+ + +A++ +G H ++ +AI+ I PSN + Y
Sbjct: 549 YPEAIESFNQVIKFNPNSYQAWYGKGWSQHQNQRYAEAIESYKKAATIKPSNYQVWYSLG 608
Query: 627 SCYHAIGEYREAV 639
+ + + +Y+EA+
Sbjct: 609 NSQYILQQYQEAI 621
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 79/166 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G + VN +Y A +D+ ++ Y A + +G R AI F + I+ NP+
Sbjct: 506 GNSLVNLNRYEDAFKAYDKAVQYKTDYAIAWLSKGNVLIILRRYPEAIESFNQVIKFNPN 565
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ +AW +G ++ EAI+ KA +P++ + + G + + + A+ +
Sbjct: 566 SYQAWYGKGWSQHQNQRYAEAIESYKKAATIKPSNYQVWYSLGNSQYILQQYQEAIASYN 625
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
V+ ++ ++ G AL S+ +Y+ A ++ +AI+ ++ +A
Sbjct: 626 KAVRYQPKHIESWYSRGNALFSLKQYQDAIASYEQAIKHKPDYSQA 671
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+A L ++G F+ + + A+ V + + A+ G L + +Y+ A A+
Sbjct: 327 NNATELAKQGNTFFELQRYKDALSAYKKAVDIRPDYAPAWYGKGKTLFRLKQYQDALTAY 386
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAIQ+ +++EAW Q L +A+ + L +++ + + ++ RG L Q
Sbjct: 387 DKAIQIQPDYVEAWSGRGFSLQSLQRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQ 446
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +AIK + E Y + ++ EY EA+
Sbjct: 447 YDRAIKSYDKAIEFKSDAYESFYNKGLALQSLKEYNEAI 485
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 77/161 (47%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++G L +A+ KA++ P+ A + +G F+ K + A+ +++
Sbjct: 334 KQGNTFFELQRYKDALSAYKKAVDIRPDYAPAWYGKGKTLFRLKQYQDALTAYDKAIQIQ 393
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ A++ G +L S+ Y +A + KA+QL+ N+ E W + + +L ++A++
Sbjct: 394 PDYVEAWSGRGFSLQSLQRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDRAIKS 453
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + ++++ +GL L L ++ +AI + + I
Sbjct: 454 YDKAIEFKSDAYESFYNKGLALQSLKEYNEAINAYNKAIEI 494
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 372 RISKSKSISVDFR-------LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
R KS +++F+ ++G+A + +Y AI+ +++ ++ Y A G +
Sbjct: 449 RAIKSYDKAIEFKSDAYESFYNKGLALQSLKEYNEAINAYNKAIEIKSDYERAWYNLGNS 508
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
E A + +A+Q AW +G L EAI+ ++ ++F PNS
Sbjct: 509 LVNLNRYEDAFKAYDKAVQYKTDYAIAWLSKGNVLIILRRYPEAIESFNQVIKFNPNSYQ 568
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ +G + + + A+E + N + LG + + +Y++A ++ KA+
Sbjct: 569 AWYGKGWSQHQNQRYAEAIESYKKAATIKPSNYQVWYSLGNSQYILQQYQEAIASYNKAV 628
Query: 545 QLDRNFLEAW---GH----LTQFYQDLANSEKALE 572
+ +E+W G+ L Q+ +A+ E+A++
Sbjct: 629 RYQPKHIESWYSRGNALFSLKQYQDAIASYEQAIK 663
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 18/149 (12%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L + KAI+I Q ++ R F L+ + I DKALQL+ + +
Sbjct: 382 ALTAYDKAIQI------QPDYVEAWSGRGFSLQSLQRYAEAIASFDKALQLNENYPEVWN 435
Query: 108 LKGCAFSALGRKEEALSVWEK-------GYEHALHQSADLKQFLELEELLTAAKQDRSVT 160
+G AFS L + + A+ ++K YE ++ L+ E E + A + +
Sbjct: 436 ARGEAFSNLKQYDRAIKSYDKAIEFKSDAYESFYNKGLALQSLKEYNEAINAYNKAIEIK 495
Query: 161 CEYD-----VSNSMSSLTVSESGLNANDK 184
+Y+ + NS+ +L E A DK
Sbjct: 496 SDYERAWYNLGNSLVNLNRYEDAFKAYDK 524
>gi|334118605|ref|ZP_08492694.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333459612|gb|EGK88225.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 560
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 116/264 (43%), Gaps = 37/264 (14%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+AI+ FD+ +K + YPEA IGRG + R+ E AI+ F +A+Q NP+ EAW RG A
Sbjct: 284 AAIACFDRAIKINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAVQINPNFPEAWLGRGIA 343
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERG------------IVNF------------ 494
A L EAI S AL+ E N + + RG I F
Sbjct: 344 LAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISLTSEAEI 403
Query: 495 -------------KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
K + + AV + +K+ +N A+ G ALS + +Y++A ++
Sbjct: 404 TSKVGLQQGAALEKLQRYEEAVAAYNRVLKIVPDNFEAWLKRGNALSKLQQYEQALASYD 463
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI + + + W ++ N +AL QV+ + +A+ RG +L L +
Sbjct: 464 RAITVWPDNYQGWVQRGLILGEMQNYSQALVAFDQVIQLKPDNWEAWAQRGDVLQKLQRT 523
Query: 602 KKAIKDLSSGLGIDPSNIECLYLR 625
+ AI L I P E L R
Sbjct: 524 QDAISSYGVALEIKPDYYEALVSR 547
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 33/288 (11%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG ++ ++ AI+ FD ++ + EA RG ++ EAA S + +A Q
Sbjct: 101 MLRGTGLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWEAAASCYKKATQL 160
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ W R+G EA+ +AL+ P + + RG+ K + + AV
Sbjct: 161 HPNLPAMWYRQGNVLVQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAERYAEAVT 220
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------- 556
++L +N A+ G+A + + +Y +A A+ + +Q+ N EAW +
Sbjct: 221 SYDRAIQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAWFYKGMALKHQ 280
Query: 557 --------------LTQFY--------QDLANS---EKALECLQQVLYIDKRFSKAYHLR 591
+ FY Q L+ S E A+ Q + I+ F +A+ R
Sbjct: 281 WADAAIACFDRAIKINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAVQINPNFPEAWLGR 340
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G+ L GL ++K+AI S+ L I+ + +E LR + +Y EA+
Sbjct: 341 GIALAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAI 388
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 38/258 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGIA KYA A++ +D++L+ P EA +G A Q +AAI+ F AI+
Sbjct: 237 FNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAWFYKGMALKHQWA-DAAIACFDRAIKI 295
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N EAW RGQ L ES +DF A+
Sbjct: 296 NSFYPEAWIGRGQ---TLSES-------------------------------RDFEGAIA 321
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
V+++ A+ G+AL+ + YK+A A+ A+Q++ NFLEAW + + L
Sbjct: 322 AFDQAVQINPNFPEAWLGRGIALAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKL 381
Query: 565 ANSEKALECLQQVLYIDKR---FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
E+A+ C +V+ + SK +G L L ++++A+ + L I P N E
Sbjct: 382 QQYEEAIACFDKVISLTSEAEITSKVGLQQGAALEKLQRYEEAVAAYNRVLKIVPDNFEA 441
Query: 622 LYLRASCYHAIGEYREAV 639
R + + +Y +A+
Sbjct: 442 WLKRGNALSKLQQYEQAL 459
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 80/208 (38%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
EAA+ + +A+Q P AW G+A L E + +A P RG
Sbjct: 46 EAAVICYGKAVQIKPDWARAWLNLGKAYKQLHSYAETVACADRATAINPEEYWAWMLRGT 105
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ + A+ ++++ E A+ G L + +++ A + KA QL N
Sbjct: 106 GLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWEAAASCYKKATQLHPNLP 165
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
W +A+ ++ L + +A+ RGL L ++ +A+
Sbjct: 166 AMWYRQGNVLVQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAERYAEAVTSYDRA 225
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + P N + R + +Y EAV
Sbjct: 226 IQLQPQNSLAWFNRGIASAKLHKYAEAV 253
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 113/318 (35%), Gaps = 77/318 (24%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y +A+ + + ++ P + A + G A ++ A NP AW
Sbjct: 43 GRYEAAVICYGKAVQIKPDWARAWLNLGKAYKQLHSYAETVACADRATAINPEEYWAWML 102
Query: 455 RG----------QARAAL-----------------GESVEAIQDL-------SKALEFEP 480
RG +A AA G +E +Q KA + P
Sbjct: 103 RGTGLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWEAAASCYKKATQLHP 162
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N + + +G V + + + AV +KL N A+ GLAL Y +A ++
Sbjct: 163 NLPAMWYRQGNVLVQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAERYAEAVTSY 222
Query: 541 LKAIQL----------------------------DR------NFLEAWGHLTQFYQDLA- 565
+AIQL DR N EAW FY+ +A
Sbjct: 223 DRAIQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAW-----FYKGMAL 277
Query: 566 ---NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
++ A+ C + + I+ + +A+ RG L + AI + I+P+ E
Sbjct: 278 KHQWADAAIACFDRAIKINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAVQINPNFPEAW 337
Query: 623 YLRASCYHAIGEYREAVI 640
R + Y+EA+I
Sbjct: 338 LGRGIALAGLERYKEAII 355
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R+ K + + L RG A +Y A++ +D+ + P + + RG +
Sbjct: 430 RVLKIVPDNFEAWLKRGNALSKLQQYEQALASYDRAITVWPDNYQGWVQRGLILGEMQNY 489
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
A+ F + IQ P EAW +RG L + +AI ALE +P+ + L R
Sbjct: 490 SQALVAFDQVIQLKPDNWEAWAQRGDVLQKLQRTQDAISSYGVALEIKPDYYEALVSR 547
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 12/191 (6%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF--KFKDFNAAVEDLSAC--- 509
RG A G A+ KA++ +P+ A R +N +K ++ E + AC
Sbjct: 35 RGNRLYAAGRYEAAVICYGKAVQIKPDWA-----RAWLNLGKAYKQLHSYAETV-ACADR 88
Query: 510 -VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++ E A+ G L S+ + +A A AIQ++ EAW + ++L E
Sbjct: 89 ATAINPEEYWAWMLRGTGLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWE 148
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
A C ++ + ++ +G +L ++ +A+ L + P+N E R
Sbjct: 149 AAASCYKKATQLHPNLPAMWYRQGNVLVQAERYPEAVAAFERALKLVPTNWEAWLNRGLA 208
Query: 629 YHAIGEYREAV 639
Y EAV
Sbjct: 209 LMKAERYAEAV 219
>gi|218248390|ref|YP_002373761.1| hypothetical protein PCC8801_3643 [Cyanothece sp. PCC 8801]
gi|257060287|ref|YP_003138175.1| hypothetical protein Cyan8802_2471 [Cyanothece sp. PCC 8802]
gi|218168868|gb|ACK67605.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
gi|256590453|gb|ACV01340.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
Length = 406
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 117/236 (49%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
K+ ++ + + G + G AI+ F+Q +K EA RG A++ + +
Sbjct: 144 PKTVQLTAEEWFNLGYNKGESGDNQGAIADFNQAIKIKSDLAEAYYNRGLAKSNLGDYQG 203
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AISD+ +AI+ P A+ RG + LG++ AI D ++A+E +P+ AD + RG+
Sbjct: 204 AISDYNQAIEIKPDYAAAYNNRGLTKYNLGDNQGAITDYTQAIEIKPDDADAYYNRGLAK 263
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ D A+ D + +K+ + +AY G A ++G+ + A + +AI++ ++ A
Sbjct: 264 YNLGDKQGAIADYNQAIKIKPDYATAYNNRGNAKYNLGDKQGAIADYNQAIKIKPDYTLA 323
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +L +++ A+ Q + I ++ AY RG LG ++ AI D +
Sbjct: 324 YICCGLAKSNLGDNQGAITDYNQAIKIKPDYADAYICRGNAKKNLGDNQGAIADYN 379
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 119/257 (46%), Gaps = 10/257 (3%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+RL GI QV + + + E G + + + AI+DF +AI
Sbjct: 129 YRLEWGITQVKPELHPKTVQ----------LTAEEWFNLGYNKGESGDNQGAIADFNQAI 178
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ EA+ RG A++ LG+ AI D ++A+E +P+ A + RG+ + D A
Sbjct: 179 KIKSDLAEAYYNRGLAKSNLGDYQGAISDYNQAIEIKPDYAAAYNNRGLTKYNLGDNQGA 238
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + +++ ++ AY GLA ++G+ + A + +AI++ ++ A+ +
Sbjct: 239 ITDYTQAIEIKPDDADAYYNRGLAKYNLGDKQGAIADYNQAIKIKPDYATAYNNRGNAKY 298
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+L + + A+ Q + I ++ AY GL LG ++ AI D + + I P +
Sbjct: 299 NLGDKQGAIADYNQAIKIKPDYTLAYICCGLAKSNLGDNQGAITDYNQAIKIKPDYADAY 358
Query: 623 YLRASCYHAIGEYREAV 639
R + +G+ + A+
Sbjct: 359 ICRGNAKKNLGDNQGAI 375
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ + K D +RG+A+ N G AI+ ++Q +K P Y A RG A+ +
Sbjct: 243 TQAIEIKPDDADAYYNRGLAKYNLGDKQGAIADYNQAIKIKPDYATAYNNRGNAKYNLGD 302
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+ +AI+ P A+ G A++ LG++ AI D ++A++ +P+ AD RG
Sbjct: 303 KQGAIADYNQAIKIKPDYTLAYICCGLAKSNLGDNQGAITDYNQAIKIKPDYADAYICRG 362
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
D A+ D + +L + + YL
Sbjct: 363 NAKKNLGDNQGAIADYNQAAQLYSQQNNMEWYL 395
>gi|88602246|ref|YP_502424.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88187708|gb|ABD40705.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 635
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 373 ISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
I KS +I + LS +G N +Y AI+ FD++L +DP A + +G +
Sbjct: 207 IEKSLTIQPELTLSWLYKGFIHHNRKEYEEAITCFDKVLAKDPFQIRAWLFKGYSLFHLH 266
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + A+ F I+ + A +G L EA A++ P ++ R
Sbjct: 267 QDDKALECFDRVIKEDRKQLRAIIYKGYCLKNLKRYKEAGNAFDNAIQLSPRDLNLRLNR 326
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
GI F+ K F A+ ++LDK N SA+ Y +L + ++A ++ K +++
Sbjct: 327 GICLFEDKQFYEALNAFDKVLELDKRNLSAWLYKIRSLIRMERIQEAFQSSGKLLEIQPR 386
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ W + E+AL+ ++ L +DK + LRGL + LG+ +A++
Sbjct: 387 EVSVWLARADLLLKMKKVEEALDATKKSLLLDKWNPDTWSLRGLCFYKLGKFNEALQCYD 446
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ L I+P +++ + RA C H + + +A+
Sbjct: 447 NALKINPKHLDAMKNRALCLHKLKRHSDAL 476
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 117/259 (45%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
++ RL+RGI + ++ A++ FD++L+ D A + + + ++ A +
Sbjct: 320 LNLRLNRGICLFEDKQFYEALNAFDKVLELDKRNLSAWLYKIRSLIRMERIQEAFQSSGK 379
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
++ P W R + + EA+ K+L + + D RG+ +K FN
Sbjct: 380 LLEIQPREVSVWLARADLLLKMKKVEEALDATKKSLLLDKWNPDTWSLRGLCFYKLGKFN 439
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++ +K++ ++ A L L + + A E + AI + + +EAW +
Sbjct: 440 EALQCYDNALKINPKHLDAMKNRALCLHKLKRHSDALEYYEHAIAGNPHNIEAWFNRGLI 499
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
N ++AL +V+ +DK +KAY +GL+ L Q+ +A++ S +DPS
Sbjct: 500 LHKAKNYDEALHSYDKVIELDKFHAKAYFNKGLIHRQLEQYFEALQAFSQATSVDPSFAS 559
Query: 621 CLYLRASCYHAIGEYREAV 639
Y Y + ++EA+
Sbjct: 560 AWYHMGLIYTDLVRHKEAL 578
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 34/229 (14%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ GK+ A+ +D LK +P + +A+ R + A+ + AI NP
Sbjct: 428 RGLCFYKLGKFNEALQCYDNALKINPKHLDAMKNRALCLHKLKRHSDALEYYEHAIAGNP 487
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG ILH K K+++ A+
Sbjct: 488 HNIEAWFNRGL---------------------------ILH-------KAKNYDEALHSY 513
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++LDK + AY GL + +Y +A +A +A +D +F AW H+ Y DL
Sbjct: 514 DKVIELDKFHAKAYFNKGLIHRQLEQYFEALQAFSQATSVDPSFASAWYHMGLIYTDLVR 573
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
++AL+C + L ++ + A +G++L G K+A +D
Sbjct: 574 HKEALQCYDKTLKLNPKHIGALLNKGVILEDAGLKKEAFMCFQKAANLD 622
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 113/271 (41%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R+ K + + +G N +Y A + FD ++ P + RG
Sbjct: 274 CFDRVIKEDRKQLRAIIYKGYCLKNLKRYKEAGNAFDNAIQLSPRDLNLRLNRGICLFED 333
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ A++ F + ++ + AW + ++ + EA Q K LE +P +
Sbjct: 334 KQFYEALNAFDKVLELDKRNLSAWLYKIRSLIRMERIQEAFQSSGKLLEIQPREVSVWLA 393
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R + K K A++ + LDK N ++ GL +G++ +A + + A++++
Sbjct: 394 RADLLLKMKKVEEALDATKKSLLLDKWNPDTWSLRGLCFYKLGKFNEALQCYDNALKINP 453
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
L+A + L ALE + + + +A+ RGL+LH + +A+
Sbjct: 454 KHLDAMKNRALCLHKLKRHSDALEYYEHAIAGNPHNIEAWFNRGLILHKAKNYDEALHSY 513
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +D + + + + + + +Y EA+
Sbjct: 514 DKVIELDKFHAKAYFNKGLIHRQLEQYFEAL 544
>gi|116619265|ref|YP_821421.1| hypothetical protein Acid_0121 [Candidatus Solibacter usitatus
Ellin6076]
gi|116222427|gb|ABJ81136.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 608
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
PE +GRG ARA QR+ AI DF I P E W R A L + A DL++
Sbjct: 172 PEPYLGRGIARAEQRKYRDAIEDFDSCIGRKPDHEECWVERALAFTGLNDYTHAQTDLNE 231
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
AL+ PN RG V + D AV D + +K D ++ Y + +++
Sbjct: 232 ALKLNPNDTRAWRVRGAVRERLSDDAGAVADYTEALKRDDKDVRVYMARAAVYVRMKKFE 291
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
++ E +A+QLD E + Y L EK LE + + + + + RG
Sbjct: 292 ESLEDRNQAVQLDPKNPEVYVARGGSYHLLGQHEKGLEDRTKAIGLQPGSALGWTARGDA 351
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
LG+ +A++DL +DP+N + LRA
Sbjct: 352 FFLLGRWDEALRDLEQATKLDPNNADTRQLRA 383
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RGIA+ + KY AI FD + P + E + R A + A +D EA++
Sbjct: 176 LGRGIARAEQRKYRDAIEDFDSCIGRKPDHEECWVERALAFTGLNDYTHAQTDLNEALKL 235
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ AW+ RG R L + A+ D ++AL+ + + R V + K F ++E
Sbjct: 236 NPNDTRAWRVRGAVRERLSDDAGAVADYTEALKRDDKDVRVYMARAAVYVRMKKFEESLE 295
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + V+LD +N Y G + +G+++K E KAI L W + L
Sbjct: 296 DRNQAVQLDPKNPEVYVARGGSYHLLGQHEKGLEDRTKAIGLQPGSALGWTARGDAFFLL 355
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGL 593
++AL L+Q +D + LR L
Sbjct: 356 GRWDEALRDLEQATKLDPNNADTRQLRAL 384
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 3/269 (1%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ K KS + RG + G+ A AI+ + L DP EAL RG +
Sbjct: 29 TKPDKKKSQAA---WQRGKKADDAGQRAEAIAAYSDALAADPSNTEALRARGKDYQADGD 85
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
A +DF AI+ P+ E + R AA G+ AI D + A+ + D+ R
Sbjct: 86 RAKAQADFDRAIELQPARAEGYVVRAGFFAATGQPERAIHDYTLAINLKMEHVDVYSGRA 145
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++F+ A ED + ++L +N Y G+A + +Y+ A E I +
Sbjct: 146 KAYTATREFDKAEEDFTQAIRLRLDNPEPYLGRGIARAEQRKYRDAIEDFDSCIGRKPDH 205
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
E W + L + A L + L ++ ++A+ +RG + L A+ D +
Sbjct: 206 EECWVERALAFTGLNDYTHAQTDLNEALKLNPNDTRAWRVRGAVRERLSDDAGAVADYTE 265
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
L D ++ RA+ Y + ++ E++
Sbjct: 266 ALKRDDKDVRVYMARAAVYVRMKKFEESL 294
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 34/288 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +G A A + FD+ ++ P E + R A + E AI D+T AI
Sbjct: 75 ARGKDYQADGDRAKAQADFDRAIELQPARAEGYVVRAGFFAATGQPERAIHDYTLAINLK 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + R +A A E +A +D ++A+ ++ + RGI + + + A+ED
Sbjct: 135 MEHVDVYSGRAKAYTATREFDKAEEDFTQAIRLRLDNPEPYLGRGIARAEQRKYRDAIED 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----------- 554
+C+ +++ + LA + + +Y A+ +A++L+ N AW
Sbjct: 195 FDSCIGRKPDHEECWVERALAFTGLNDYTHAQTDLNEALKLNPNDTRAWRVRGAVRERLS 254
Query: 555 ---GHLTQF--------------------YQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
G + + Y + E++LE Q + +D + + Y R
Sbjct: 255 DDAGAVADYTEALKRDDKDVRVYMARAAVYVRMKKFEESLEDRNQAVQLDPKNPEVYVAR 314
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G H LGQH+K ++D + +G+ P + R + +G + EA+
Sbjct: 315 GGSYHLLGQHEKGLEDRTKAIGLQPGSALGWTARGDAFFLLGRWDEAL 362
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R V K+ ++ +Q ++ DP PE + RG + + E + D T+AI
Sbjct: 278 MARAAVYVRMKKFEESLEDRNQAVQLDPKNPEVYVARGGSYHLLGQHEKGLEDRTKAIGL 337
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
P + W RG A LG EA++DL +A + +PN+AD R +
Sbjct: 338 QPGSALGWTARGDAFFLLGRWDEALRDLEQATKLDPNNADTRQLRALAQ 386
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%)
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
A A++ + + LK D + R ++ E ++ D +A+Q +P E + RG
Sbjct: 257 AGAVADYTEALKRDDKDVRVYMARAAVYVRMKKFEESLEDRNQAVQLDPKNPEVYVARGG 316
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
+ LG+ + ++D +KA+ +P SA RG F ++ A+ DL KLD N
Sbjct: 317 SYHLLGQHEKGLEDRTKAIGLQPGSALGWTARGDAFFLLGRWDEALRDLEQATKLDPNNA 376
Query: 518 SAYTYLGLALSSIGEYKKAEEA 539
LA + + E K E A
Sbjct: 377 DTRQLRALAQAHVDEKVKEERA 398
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G + E +A AI Q +K DP A RG A ++ + +++DF +AI+ NP
Sbjct: 511 GRKHIQEEHFAQAIGPLTQAIKLDPSLATAFNARGYAYFRLKKFKESLADFDQAIKLNPL 570
Query: 448 AGEAWKRRGQAR 459
A+ RG AR
Sbjct: 571 YANAYTNRGSAR 582
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
+AI L++A++ +P+ A + RG F+ K F ++ D +KL+ +AYT G
Sbjct: 521 AQAIGPLTQAIKLDPSLATAFNARGYAYFRLKKFKESLADFDQAIKLNPLYANAYTNRGS 580
Query: 526 A 526
A
Sbjct: 581 A 581
>gi|440684825|ref|YP_007159620.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428681944|gb|AFZ60710.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 279
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 10/232 (4%)
Query: 364 RNKKFCVT--------RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
RN+ VT R++ + S + +F + +G Q +G +AI+ + + + + Y
Sbjct: 35 RNQDVLVTEVGVSPPNRLTANTSKAGEFYI-QGQNQHAKGNSEAAIAAYSKSISLNSQYA 93
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A RG A E AI+D+ +A++ NP+ GE + RG ARA+LG+ AI D ++A
Sbjct: 94 PAFKSRGLAYFDAGNKEGAIADYNQALRLNPNDGETYNNRGNARASLGDQQAAIADYNEA 153
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ PN A+ + RG D N AV D + +++D+ AY G + G+ +K
Sbjct: 154 IRLAPNYAEAFNNRGNARSAQGDKNGAVADYTEAIRIDQNYSVAYNNRGNTYFAQGDQQK 213
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI-DKRFSK 586
A + +AI+L+ NF A+ + + + AL+ LQ+ I DK +K
Sbjct: 214 AIADYNQAIRLNPNFGPAFNNRGNALAAIGDKRGALQDLQRAAAIFDKEGNK 265
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 1/208 (0%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E +S + AGE + + GQ + A G S AI SK++ A RG+
Sbjct: 43 EVGVSPPNRLTANTSKAGEFYIQ-GQNQHAKGNSEAAIAAYSKSISLNSQYAPAFKSRGL 101
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F + A+ D + ++L+ + Y G A +S+G+ + A + +AI+L N+
Sbjct: 102 AYFDAGNKEGAIADYNQALRLNPNDGETYNNRGNARASLGDQQAAIADYNEAIRLAPNYA 161
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + + A+ + + ID+ +S AY+ RG G +KAI D +
Sbjct: 162 EAFNNRGNARSAQGDKNGAVADYTEAIRIDQNYSVAYNNRGNTYFAQGDQQKAIADYNQA 221
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++P+ R + AIG+ R A+
Sbjct: 222 IRLNPNFGPAFNNRGNALAAIGDKRGAL 249
>gi|330507994|ref|YP_004384422.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328928802|gb|AEB68604.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 349
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 128/267 (47%), Gaps = 2/267 (0%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
RI KS+ S L +G ++GK+ AIS +D + +DP A + +G A +
Sbjct: 70 RIPKSREASK--WLKKGDDLYDQGKFDEAISCYDNAIGKDPKNKLAWVNKGAALLELMKS 127
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AIS F +A + P + EAW +G A L EAI + A++ P SAD + +GI
Sbjct: 128 DEAISCFDKATELYPKSAEAWNEKGYALNRLDRFDEAIIAFNNAIDINPRSADAWNGKGI 187
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A++ + + + A+ G ALS +G+ ++A +A+ KAI ++
Sbjct: 188 ALDNSGKHDEAIQAYDRAIAIRPKFAIAWNNKGWALSGLGKKEEAIQAYNKAISINSKDP 247
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+W DL ++A++ + + +D + + ++ +G +GL ++++A++ +
Sbjct: 248 SSWNCKGNALADLGKHDEAVKAYGRAIELDPKDAILWNNKGAAFYGLSRYEEALEAFNKA 307
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREA 638
+ IDP + + A+ E+
Sbjct: 308 IEIDPQEALIWHFKGETLKALNRTEES 334
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q + + AIS + AI +P AW +G A L +S EAI KA E P SA+ +
Sbjct: 90 QGKFDEAISCYDNAIGKDPKNKLAWVNKGAALLELMKSDEAISCFDKATELYPKSAEAWN 149
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
E+G + F+ A+ + + ++ + A+ G+AL + G++ +A +A+ +AI +
Sbjct: 150 EKGYALNRLDRFDEAIIAFNNAIDINPRSADAWNGKGIALDNSGKHDEAIQAYDRAIAIR 209
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
F AW + L E+A++ + + I+ + +++ +G L LG+H +A+K
Sbjct: 210 PKFAIAWNNKGWALSGLGKKEEAIQAYNKAISINSKDPSSWNCKGNALADLGKHDEAVKA 269
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +DP + + + ++ + Y EA+
Sbjct: 270 YGRAIELDPKDAILWNNKGAAFYGLSRYEEAL 301
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S D +GIA N GK+ AI +D+ + P + A +G A + + E AI +
Sbjct: 178 SADAWNGKGIALDNSGKHDEAIQAYDRAIAIRPKFAIAWNNKGWALSGLGKKEEAIQAYN 237
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI N +W +G A A LG+ EA++ +A+E +P A + + +G + +
Sbjct: 238 KAISINSKDPSSWNCKGNALADLGKHDEAVKAYGRAIELDPKDAILWNNKGAAFYGLSRY 297
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
A+E + +++D + + + G L ++ ++++ A KA +L
Sbjct: 298 EEALEAFNKAIEIDPQEALIWHFKGETLKALNRTEESDSAFAKAKEL 344
>gi|284038657|ref|YP_003388587.1| hypothetical protein Slin_3793 [Spirosoma linguale DSM 74]
gi|283817950|gb|ADB39788.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
Length = 428
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 115/236 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ + AI +D+ ++ + A + RG +++ Q + AI DF +I+ N
Sbjct: 48 NRGLAKATLKDHRGAILDYDKAIELNSKDALAYLSRGVSKSRQEDHRGAILDFGRSIELN 107
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A +A+ RG +R+ L + A+ D SKA+E EP +A + R + K DF ++ D
Sbjct: 108 PDAPQAYYNRGISRSRLDQYQGALTDFSKAIELEPVNAYAYYARAVTKQKLNDFAGSILD 167
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +++ + AY G + + ++ A KAI+L E++ H L
Sbjct: 168 FTKVIEISPKRAQAYAGRGTSKVELNDFTGAITDLNKAIELSPQDSESYFHRGYAKGKLD 227
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ + AL ++ L + +AY+ RG LG K A++D + + ++ +E
Sbjct: 228 DYKGALPDYERALALKPDHYRAYYGRGFCRSKLGDQKGAVQDFNQAIEVNNVYVET 283
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 125/285 (43%), Gaps = 36/285 (12%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI++ +Y A++ F + ++ +P+ A R + + +I DFT+ I+ +
Sbjct: 116 NRGISRSRLDQYQGALTDFSKAIELEPVNAYAYYARAVTKQKLNDFAGSILDFTKVIEIS 175
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG ++ L + AI DL+KA+E P ++ RG K D+ A+ D
Sbjct: 176 PKRAQAYAGRGTSKVELNDFTGAITDLNKAIELSPQDSESYFHRGYAKGKLDDYKGALPD 235
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----GHLTQFY 561
+ L ++ AY G S +G+ K A + +AI+++ ++E G ++
Sbjct: 236 YERALALKPDHYRAYYGRGFCRSKLGDQKGAVQDFNQAIEVNNVYVETKVVYNGRISHAI 295
Query: 562 QD--------------------------------LANSEKALECLQQVLYIDKRFSKAYH 589
D +S+ A+ L + + ++ +++AY
Sbjct: 296 LDNLRNVVQERDKINELGSERAEAYFSRGVSKHRQGDSKAAIIDLTKAIELNPAYAEAYF 355
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
GL+ G K A+ D +S + + P E Y+R H++G+
Sbjct: 356 TLGLIKSAQGDQKGALTDCNSAIKLKPGYAEVFYVRGLIKHSLGD 400
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 143/345 (41%), Gaps = 50/345 (14%)
Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF---- 383
+ +S ++ +KSSD T + S M E + + N+ + + +D+
Sbjct: 12 FFESGVNRSKSSDFTGALQAFSMAITMNPENA-PSYYNRGLAKATLKDHRGAILDYDKAI 70
Query: 384 ---------RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
LSRG+++ + + AI F + ++ +P P+A RG +R+ + + A
Sbjct: 71 ELNSKDALAYLSRGVSKSRQEDHRGAILDFGRSIELNPDAPQAYYNRGISRSRLDQYQGA 130
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
++DF++AI+ P A+ R + L + +I D +K +E P A RG
Sbjct: 131 LTDFSKAIELEPVNAYAYYARAVTKQKLNDFAGSILDFTKVIEISPKRAQAYAGRGTSKV 190
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ DF A+ DL+ ++L ++ +Y + G A + +YK A + +A+ L + A+
Sbjct: 191 ELNDFTGAITDLNKAIELSPQDSESYFHRGYAKGKLDDYKGALPDYERALALKPDHYRAY 250
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRF------------------------------ 584
L + + A++ Q + ++ +
Sbjct: 251 YGRGFCRSKLGDQKGAVQDFNQAIEVNNVYVETKVVYNGRISHAILDNLRNVVQERDKIN 310
Query: 585 ------SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
++AY RG+ H G K AI DL+ + ++P+ E +
Sbjct: 311 ELGSERAEAYFSRGVSKHRQGDSKAAIIDLTKAIELNPAYAEAYF 355
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 111/270 (41%), Gaps = 38/270 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + + +A +I F ++++ P +A GRGT++ + AI+D +AI+ +
Sbjct: 150 ARAVTKQKLNDFAGSILDFTKVIEISPKRAQAYAGRGTSKVELNDFTGAITDLNKAIELS 209
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E++ RG A+ L + A+ D +AL +P+ + RG K D AV+D
Sbjct: 210 PQDSESYFHRGYAKGKLDDYKGALPDYERALALKPDHYRAYYGRGFCRSKLGDQKGAVQD 269
Query: 506 LSACVK------------------------------------LDKENKSAYTYLGLALSS 529
+ ++ L E AY G++
Sbjct: 270 FNQAIEVNNVYVETKVVYNGRISHAILDNLRNVVQERDKINELGSERAEAYFSRGVSKHR 329
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
G+ K A KAI+L+ + EA+ L + + AL + + +++ ++
Sbjct: 330 QGDSKAAIIDLTKAIELNPAYAEAYFTLGLIKSAQGDQKGALTDCNSAIKLKPGYAEVFY 389
Query: 590 LRGLLLHGLGQHKKAIKDLSSG--LGIDPS 617
+RGL+ H LG DLS LG P+
Sbjct: 390 VRGLIKHSLGDENGGCLDLSKAGELGYTPA 419
>gi|443661142|ref|ZP_21132694.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|159027046|emb|CAO89232.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332373|gb|ELS46985.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 970
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 11/220 (5%)
Query: 364 RNKKFCVTRISKSKSISV----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
+ K R+S + + + +F +G +V G + AI+ +DQ L+ P +A
Sbjct: 155 QGKTSTTQRLSTANNTPIVQDAEFWFEQGYQKVINGDFIGAIASYDQALEIKPDLHQAWY 214
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG A E AI+ + A++ P EAW RG A LG EAI +ALE +
Sbjct: 215 NRGIALRNLGRFEQAIASYDRALEFKPDFHEAWTNRGLALKNLGRYEEAIASYDRALEIK 274
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P+ + + RGI F A+ +++ + A+ G+AL ++G +++A +
Sbjct: 275 PDCHEAWYNRGIALHNLGRFAEAIASYDQALEIKPDYHEAWYNRGIALHNLGRFEQAIAS 334
Query: 540 HLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALE 572
+A+++ ++ EAW G+L +F Q +A+ ++ALE
Sbjct: 335 WDRALEIKPDYHEAWNNRGIALGNLGRFEQAIASFDRALE 374
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA N G++ AI+ +D+ L+ P + EA RG A E AI+ + A++
Sbjct: 215 NRGIALRNLGRFEQAIASYDRALEFKPDFHEAWTNRGLALKNLGRYEEAIASYDRALEIK 274
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALE +P+ + + RGI F A+
Sbjct: 275 PDCHEAWYNRGIALHNLGRFAEAIASYDQALEIKPDYHEAWYNRGIALHNLGRFEQAIAS 334
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+++ + A+ G+AL ++G +++A + +A++ + EAW
Sbjct: 335 WDRALEIKPDYHEAWNNRGIALGNLGRFEQAIASFDRALEFKPDLHEAW 383
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 96/201 (47%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E +G + + AI+ + +A++ P +AW RG A LG +AI +A
Sbjct: 177 EFWFEQGYQKVINGDFIGAIASYDQALEIKPDLHQAWYNRGIALRNLGRFEQAIASYDRA 236
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
LEF+P+ + RG+ + A+ +++ + A+ G+AL ++G + +
Sbjct: 237 LEFKPDFHEAWTNRGLALKNLGRYEEAIASYDRALEIKPDCHEAWYNRGIALHNLGRFAE 296
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A ++ +A+++ ++ EAW + +L E+A+ + L I + +A++ RG+ L
Sbjct: 297 AIASYDQALEIKPDYHEAWYNRGIALHNLGRFEQAIASWDRALEIKPDYHEAWNNRGIAL 356
Query: 596 HGLGQHKKAIKDLSSGLGIDP 616
LG+ ++AI L P
Sbjct: 357 GNLGRFEQAIASFDRALEFKP 377
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%)
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
E W +G + G+ + AI +ALE +P+ + RGI F A+
Sbjct: 176 AEFWFEQGYQKVINGDFIGAIASYDQALEIKPDLHQAWYNRGIALRNLGRFEQAIASYDR 235
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++ + A+T GLAL ++G Y++A ++ +A+++ + EAW + +L
Sbjct: 236 ALEFKPDFHEAWTNRGLALKNLGRYEEAIASYDRALEIKPDCHEAWYNRGIALHNLGRFA 295
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
+A+ Q L I + +A++ RG+ LH LG+ ++AI L I P E R
Sbjct: 296 EAIASYDQALEIKPDYHEAWYNRGIALHNLGRFEQAIASWDRALEIKPDYHEAWNNRGIA 355
Query: 629 YHAIGEYREAV 639
+G + +A+
Sbjct: 356 LGNLGRFEQAI 366
>gi|346224662|ref|ZP_08845804.1| TPR repeat-containing protein [Anaerophaga thermohalophila DSM
12881]
Length = 711
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 108/236 (45%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+++ ++ GIA + G++ AI+ + +IL P A + RG A+ + A+ DF+
Sbjct: 130 NINLMINLGIAYILTGQFDKAIATYTEILDTSPKLVRAYLNRGLAKFSASDTTGALKDFS 189
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ NP + + R G +A+ D+++A++ P+ + RGI+ ++ D
Sbjct: 190 KAIEVNPYIPDGYVNRSMIEYYRGNFDDALADINEAIKLRPDESSFYMNRGIIRYQLDDL 249
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ED V+++ N Y G+ + IG+ A + + + L L +
Sbjct: 250 RGTMEDFDKFVEMEPRNAMGYNNRGILRAEIGDLDGAIDDFSRVLALRGEDLPTLYYRGM 309
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
Y++ KAL V F+ Y+ R + LGQ K A D ++ + I+
Sbjct: 310 LYKEKGEFRKALSDFNIVADAYPDFAPVYYNRAEVKQALGQTKAAQLDYNTAMKIE 365
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 34/253 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI N ++I+ F + L DP +I G A + + AI+ +TE + ++P
Sbjct: 103 RGILYQNMKNPEASIADFKRGLDIDPRNINLMINLGIAYILTGQFDKAIATYTEILDTSP 162
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG A+ + ++ A++D SKA+E P D R ++ + +F+ A+ D+
Sbjct: 163 KLVRAYLNRGLAKFSASDTTGALKDFSKAIEVNPYIPDGYVNRSMIEYYRGNFDDALADI 222
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ +KL + S Y G+ QLD DL
Sbjct: 223 NEAIKLRPDESSFYMNRGII----------------RYQLD---------------DLRG 251
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ +E + + ++ R + Y+ RG+L +G AI D S L + ++ LY R
Sbjct: 252 T---MEDFDKFVEMEPRNAMGYNNRGILRAEIGDLDGAIDDFSRVLALRGEDLPTLYYRG 308
Query: 627 SCYHAIGEYREAV 639
Y GE+R+A+
Sbjct: 309 MLYKEKGEFRKAL 321
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 13/179 (7%)
Query: 376 SKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
SK+I V D ++R + + G + A++ ++ +K P + RG R +
Sbjct: 189 SKAIEVNPYIPDGYVNRSMIEYYRGNFDDALADINEAIKLRPDESSFYMNRGIIRYQLDD 248
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L + DF + ++ P + RG RA +G+ AI D S+ L L+ RG
Sbjct: 249 LRGTMEDFDKFVEMEPRNAMGYNNRGILRAEIGDLDGAIDDFSRVLALRGEDLPTLYYRG 308
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ + +F A+ D + AY + E K+A KA QLD N
Sbjct: 309 MLYKEKGEFRKALSDFNIVA-------DAYPDFAPVYYNRAEVKQA-LGQTKAAQLDYN 359
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y I +++++ +P + A G + R E A+ +++AI+ N EA+ RG
Sbjct: 602 YNMIIDDLEKVVEIEPDFEFAWFNLGYMSSVLRNFEEAVEFYSKAIEKNSDFAEAYFNRG 661
Query: 457 QARAALGESVEAIQDLSKALE 477
R LG++ E DLSKA E
Sbjct: 662 LVRIFLGKTSEGTLDLSKAGE 682
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLA-----NSEKALECLQQVLY 579
++ IG E ++ AIQ + A +L + FY+ L + AL + L
Sbjct: 32 MTIIGRNALYFEDYVLAIQYFNQIIRAKPYLAEPYFYRALGKYYLEDYIGALNDCNEALE 91
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AY+LRG+L + + +I D GL IDP NI + Y G++ +A+
Sbjct: 92 RNPYLVDAYNLRGILYQNMKNPEASIADFKRGLDIDPRNINLMINLGIAYILTGQFDKAI 151
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ RG L A+ +F + I+ NP A R R + +SV+ + + K +
Sbjct: 523 LMERGLLYMDVLNLNNALDNFNQVIRINPDYYIARFARAFTRYKMVQSVKEM-NTGKIPD 581
Query: 478 FEP----NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+P + D L ++ I+ D+N ++DL V+++ + + A+ LG S + +
Sbjct: 582 EDPLAVSGAGDELSQQAIL-----DYNMIIDDLEKVVEIEPDFEFAWFNLGYMSSVLRNF 636
Query: 534 KKAEEAHLKAIQLDRNFLEAW 554
++A E + KAI+ + +F EA+
Sbjct: 637 EEAVEFYSKAIEKNSDFAEAY 657
>gi|225620848|ref|YP_002722106.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215668|gb|ACN84402.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 798
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 106/195 (54%), Gaps = 4/195 (2%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI DF AI E + RG + L E EA+Q ++KA+E +PN + +ERG+++
Sbjct: 407 AIEDFDRAISLYDRDCEFYYYRGLTNSYLNELDEALQYINKAIELDPNYINAYNERGLIH 466
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ +++ A++D ++LD E+ A +L L+ ++ EY+ A + + + I+LD N ++
Sbjct: 467 YRNSNYDLAIKDFKKVIELDNESVYANYHLALSYDALEEYETALKYYARVIELDPNTPDS 526
Query: 554 WGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + L + +L N +A+E +V+ ID AY G+ L +H+KAI +
Sbjct: 527 YYNRALAEIEMELYN--EAIEDFYKVIDIDNTIIDAYFNIGICYDSLKEHQKAIDCYTKV 584
Query: 612 LGIDPSNIECLYLRA 626
+ D S+I+ Y R
Sbjct: 585 IEADKSSIDAYYNRG 599
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 125/254 (49%), Gaps = 4/254 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
G+ + G Y +I+ + +I++ D +Y + R A + E A+ D+ +AI+ NP
Sbjct: 293 GLLEYKLGNYKESINYYTKIIEINDDIYY-SYYNRALAEESLQLYEDALKDYNKAIELNP 351
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ RG + + EA++D +KA+E E N A + + R ++ + + A+ED
Sbjct: 352 EDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDF 411
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L + Y Y GL S + E +A + KAI+LD N++ A+ + +N
Sbjct: 412 DRAISLYDRDCEFYYYRGLTNSYLNELDEALQYINKAIELDPNYINAYNERGLIHYRNSN 471
Query: 567 SEKALECLQQVLYIDKRFSKA-YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A++ ++V+ +D A YHL L L +++ A+K + + +DP+ + Y R
Sbjct: 472 YDLAIKDFKKVIELDNESVYANYHL-ALSYDALEEYETALKYYARVIELDPNTPDSYYNR 530
Query: 626 ASCYHAIGEYREAV 639
A + Y EA+
Sbjct: 531 ALAEIEMELYNEAI 544
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 12/274 (4%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ + +I VD +RG++ N Y AI FD++++ P A RG ++++ + E
Sbjct: 72 INNTHNILVDTYYNRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGKYE 131
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
I DF + ++ N EA G LG EAI++ AL + D + RG
Sbjct: 132 EGIKDFKKVLEFNEDDAEAIYYIGLGYFYLGRYQEAIKNFDIALLLDDEIDDAYYYRGHS 191
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ A+ D + V+L ++ +Y L +G Y+ A + KAI+LD N+
Sbjct: 192 KRYLNMYEEALSDFNKIVELRDDDSDSYYSKALTEFFLGLYEDAIKDFDKAIELDGNYSN 251
Query: 553 AWGH--LT----QFYQD-LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A+ LT + Y+D + + +KALE + Y+ GLL + LG +K++I
Sbjct: 252 AYYFRGLTKNSLELYKDAMDDYKKALEYADE-----DNIISIYNDMGLLEYKLGNYKESI 306
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + I+ Y RA ++ Y +A+
Sbjct: 307 NYYTKIIEINDDIYYSYYNRALAEESLQLYEDAL 340
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 100/212 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+F RG+ + A+ ++ ++ DP Y A RG + AI DF +
Sbjct: 423 EFYYYRGLTNSYLNELDEALQYINKAIELDPNYINAYNERGLIHYRNSNYDLAIKDFKKV 482
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ + + A + AL E A++ ++ +E +PN+ D + R + + + +N
Sbjct: 483 IELDNESVYANYHLALSYDALEEYETALKYYARVIELDPNTPDSYYNRALAEIEMELYNE 542
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ED + +D AY +G+ S+ E++KA + + K I+ D++ ++A+ +
Sbjct: 543 AIEDFYKVIDIDNTIIDAYFNIGICYDSLKEHQKAIDCYTKVIEADKSSIDAYYNRGLSK 602
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+L +A E + L ID +++ AY+ G
Sbjct: 603 VELKLYNEAFEDYIRALEIDPKYANAYNGIGF 634
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 138/325 (42%), Gaps = 74/325 (22%)
Query: 387 RGIAQVNEGKYASAISIFDQI--LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG ++ Y A+S F++I L++D ++ + F E AI DF +AI+
Sbjct: 188 RGHSKRYLNMYEEALSDFNKIVELRDDD--SDSYYSKALTEFFLGLYEDAIKDFDKAIEL 245
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILHERGIVNFKFKDFNA- 501
+ + A+ RG + +L +A+ D KALE+ E N I ++ G++ +K ++
Sbjct: 246 DGNYSNAYYFRGLTKNSLELYKDAMDDYKKALEYADEDNIISIYNDMGLLEYKLGNYKES 305
Query: 502 ---------------------------------AVEDLSACVKLDKENKSAYTYLGLALS 528
A++D + ++L+ E+ +Y GL +
Sbjct: 306 INYYTKIIEINDDIYYSYYNRALAEESLQLYEDALKDYNKAIELNPEDTYSYNNRGLIKN 365
Query: 529 SIGEYKKAEEAHLKAIQLDRN---------FLEAWGHLTQ-------------------- 559
+ Y +A E + KAI+L++N L+ HL +
Sbjct: 366 EMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDFDRAISLYDRDCEFY 425
Query: 560 FYQDLANS-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+Y+ L NS ++AL+ + + + +D + AY+ RGL+ + + AIKD + +
Sbjct: 426 YYRGLTNSYLNELDEALQYINKAIELDPNYINAYNERGLIHYRNSNYDLAIKDFKKVIEL 485
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
D ++ Y A Y A+ EY A+
Sbjct: 486 DNESVYANYHLALSYDALEEYETAL 510
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ ++ L+ + E Y +A+ + ++++ DP P++ R A AI
Sbjct: 487 NESVYANYHLALSYDALEE--YETALKYYARVIELDPNTPDSYYNRALAEIEMELYNEAI 544
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
DF + I + + +A+ G +L E +AI +K +E + +S D + RG+ +
Sbjct: 545 EDFYKVIDIDNTIIDAYFNIGICYDSLKEHQKAIDCYTKVIEADKSSIDAYYNRGLSKVE 604
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
K +N A ED +++D + +AY +G +
Sbjct: 605 LKLYNEAFEDYIRALEIDPKYANAYNGIGFS 635
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
NR Y L+ ++ I+D DK ++L P AY +G + S LG+ EE + ++K
Sbjct: 85 NRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGKYEEGIKDFKK 139
>gi|119590338|gb|EAW69932.1| tetratricopeptide repeat domain 13, isoform CRA_d [Homo sapiens]
Length = 568
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 15/219 (6%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ + + I P E +++R + + LG EA+ DL+KA++ +P SA + RG
Sbjct: 9 ELALFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGT 67
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN-- 549
+ F +D+ A ED ++L+K A Y GL G K E+ Q RN
Sbjct: 68 LYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKNEVESCAVIRQEPRNQR 127
Query: 550 ---------FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
F E W +L N E A E Q+ L +++ + LRG++L+ G
Sbjct: 128 LLKAEEKSDFEELW---RPSMLELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGS 184
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++A+K+ L ++P N C Y++ + A+G++ E +
Sbjct: 185 LQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGI 223
>gi|284035302|ref|YP_003385232.1| hypothetical protein Slin_0369 [Spirosoma linguale DSM 74]
gi|283814595|gb|ADB36433.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
Length = 446
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 125/285 (43%), Gaps = 36/285 (12%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI++ +Y A++ F + ++ +P + R R + +++DF++ I+
Sbjct: 134 NRGISRSRIDQYQGALTDFSKAIELEPANAYSYYARAITRQKLNDFAGSLTDFSKVIEIT 193
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG ++ L + AI DL+KA+E P + R K D+ AA+ D
Sbjct: 194 PKRAQAYAGRGLSKVELNDFTGAITDLNKAIELSPEDGESYFYRAYAKGKLDDYKAALPD 253
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD------------------ 547
+ L +N AY G S +G+ K A + +AI+++
Sbjct: 254 YERALALKPDNYRAYYGRGFCRSKLGDQKGAVQDFNQAIEINNVYVDTKVVYNGRISRAI 313
Query: 548 ----RNFLEAWGHLTQFYQDLA--------------NSEKALECLQQVLYIDKRFSKAYH 589
RN ++ + + + A +S+ A+ L + + ++ +S+AY
Sbjct: 314 LDNLRNVVQERDKINELSAERAEAYFSRGVSKNKQGDSKAAIVDLNKAIELNPAYSEAYF 373
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
RG++ G K A+ D +S + + P E Y+R H++G+
Sbjct: 374 SRGMIKSAQGDQKGALTDCNSAIKLKPGYAEVFYVRGLIKHSLGD 418
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 115/230 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ N + AI +D+ ++ + A + RG +++ Q + A+ DF+ +I+ N
Sbjct: 66 NRGLAKANLKDHRGAILDYDKAIELNSKDAMAYLSRGVSKSRQDDHRGALLDFSRSIELN 125
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG +R+ + + A+ D SKA+E EP +A + R I K DF ++ D
Sbjct: 126 PDDPQAYYNRGISRSRIDQYQGALTDFSKAIELEPANAYSYYARAITRQKLNDFAGSLTD 185
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S +++ + AY GL+ + ++ A KAI+L E++ + L
Sbjct: 186 FSKVIEITPKRAQAYAGRGLSKVELNDFTGAITDLNKAIELSPEDGESYFYRAYAKGKLD 245
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ + AL ++ L + +AY+ RG LG K A++D + + I+
Sbjct: 246 DYKAALPDYERALALKPDNYRAYYGRGFCRSKLGDQKGAVQDFNQAIEIN 295
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 152/361 (42%), Gaps = 50/361 (13%)
Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF---- 383
+ +S I+ +KSSD T + S M E + + N+ + + +D+
Sbjct: 30 FFESGINRSKSSDFTGALQAFSMAITMNPENA-PSYYNRGLAKANLKDHRGAILDYDKAI 88
Query: 384 ---------RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
LSRG+++ + + A+ F + ++ +P P+A RG +R+ + + A
Sbjct: 89 ELNSKDAMAYLSRGVSKSRQDDHRGALLDFSRSIELNPDDPQAYYNRGISRSRIDQYQGA 148
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
++DF++AI+ P+ ++ R R L + ++ D SK +E P A RG+
Sbjct: 149 LTDFSKAIELEPANAYSYYARAITRQKLNDFAGSLTDFSKVIEITPKRAQAYAGRGLSKV 208
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ DF A+ DL+ ++L E+ +Y Y A + +YK A + +A+ L + A+
Sbjct: 209 ELNDFTGAITDLNKAIELSPEDGESYFYRAYAKGKLDDYKAALPDYERALALKPDNYRAY 268
Query: 555 GHLTQFYQDLANSEKALECLQQVL-----YIDKRF------------------------- 584
L + + A++ Q + Y+D +
Sbjct: 269 YGRGFCRSKLGDQKGAVQDFNQAIEINNVYVDTKVVYNGRISRAILDNLRNVVQERDKIN 328
Query: 585 ------SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
++AY RG+ + G K AI DL+ + ++P+ E + R A G+ + A
Sbjct: 329 ELSAERAEAYFSRGVSKNKQGDSKAAIVDLNKAIELNPAYSEAYFSRGMIKSAQGDQKGA 388
Query: 639 V 639
+
Sbjct: 389 L 389
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 38/270 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I + +A +++ F ++++ P +A GRG ++ + AI+D +AI+ +
Sbjct: 168 ARAITRQKLNDFAGSLTDFSKVIEITPKRAQAYAGRGLSKVELNDFTGAITDLNKAIELS 227
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P GE++ R A+ L + A+ D +AL +P++ + RG K D AV+D
Sbjct: 228 PEDGESYFYRAYAKGKLDDYKAALPDYERALALKPDNYRAYYGRGFCRSKLGDQKGAVQD 287
Query: 506 LSACVKLDK------------------------------------ENKSAYTYLGLALSS 529
+ ++++ E AY G++ +
Sbjct: 288 FNQAIEINNVYVDTKVVYNGRISRAILDNLRNVVQERDKINELSAERAEAYFSRGVSKNK 347
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
G+ K A KAI+L+ + EA+ + + AL + + +++ ++
Sbjct: 348 QGDSKAAIVDLNKAIELNPAYSEAYFSRGMIKSAQGDQKGALTDCNSAIKLKPGYAEVFY 407
Query: 590 LRGLLLHGLGQHKKAIKDLSSG--LGIDPS 617
+RGL+ H LG DLS LG +P+
Sbjct: 408 VRGLIKHSLGDENGGCLDLSKAGELGYNPA 437
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 327 SYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS 386
+Y+K + D K++ R+ L+ K D + A + FC +++ K DF +
Sbjct: 238 AYAKGKLDDYKAALPDYERA-LALKPDNYR-----AYYGRGFCRSKLGDQKGAVQDFNQA 291
Query: 387 RGIAQVN-------EGKYASAI--SIFDQILKEDPM------YPEALIGRGTARAFQREL 431
I V G+ + AI ++ + + + D + EA RG ++ Q +
Sbjct: 292 IEINNVYVDTKVVYNGRISRAILDNLRNVVQERDKINELSAERAEAYFSRGVSKNKQGDS 351
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI D +AI+ NP+ EA+ RG ++A G+ A+ D + A++ +P A++ + RG+
Sbjct: 352 KAAIVDLNKAIELNPAYSEAYFSRGMIKSAQGDQKGALTDCNSAIKLKPGYAEVFYVRGL 411
Query: 492 VNFKFKDFNAAVEDLSACVKL 512
+ D N DLS +L
Sbjct: 412 IKHSLGDENGGCLDLSKAGEL 432
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
SRG+++ +G +AI ++ ++ +P Y EA RG ++ Q + + A++D AI+
Sbjct: 339 FSRGVSKNKQGDSKAAIVDLNKAIELNPAYSEAYFSRGMIKSAQGDQKGALTDCNSAIKL 398
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
P E + RG + +LG+ DLSKA E N A
Sbjct: 399 KPGYAEVFYVRGLIKHSLGDENGGCLDLSKAGELGYNPA 437
>gi|42525946|ref|NP_971044.1| TPR [Treponema denticola ATCC 35405]
gi|449112922|ref|ZP_21749468.1| hypothetical protein HMPREF9735_02517 [Treponema denticola ATCC
33521]
gi|449114862|ref|ZP_21751330.1| hypothetical protein HMPREF9721_01848 [Treponema denticola ATCC
35404]
gi|41815996|gb|AAS10925.1| TPR domain protein [Treponema denticola ATCC 35405]
gi|448954305|gb|EMB35087.1| hypothetical protein HMPREF9721_01848 [Treponema denticola ATCC
35404]
gi|448955039|gb|EMB35807.1| hypothetical protein HMPREF9735_02517 [Treponema denticola ATCC
33521]
Length = 338
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI + + ++ DP Y EA + RG + E E A++DF I+ NP +A+ +G
Sbjct: 59 AIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKALADFDRIIELNPKEDKAYYFKGLLF 118
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G +AI++L+ A+ + R + ++ A ED++ +KL+ ++
Sbjct: 119 NDAGNYNKAIENLNTAINLNDKDYEYYEARSRAYEQINEYEKAFEDINTAIKLNPKSAKL 178
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G A AI+LD N + + L Y ++ + +A E + +++
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIAIKLDSNDIWPYNGLLFIYLEMDKNNEAFEIVNKMIK 238
Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ + Y +RG L GQ+K+AI+D ++G+ + P N +R Y + EY++A
Sbjct: 239 MKPSWIGILYGIRGTLFSMRGQYKEAIEDCNTGIRMYPHNASLYNIRGKIYFDLKEYKKA 298
Query: 639 V 639
+
Sbjct: 299 I 299
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%)
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ N S E + G + AI +KA+E +P + RG + + + A
Sbjct: 34 KQNYSQAEYFNIAGNTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKA 93
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D ++L+ + AY + GL + G Y KA E AI L+ E + ++ Y+
Sbjct: 94 LADFDRIIELNPKEDKAYYFKGLLFNDAGNYNKAIENLNTAINLNDKDYEYYEARSRAYE 153
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ EKA E + + ++ + +K Y+LRG L + AI D + +D ++I
Sbjct: 154 QINEYEKAFEDINTAIKLNPKSAKLYNLRGRLHEHFERTDDAINDFKIAIKLDSNDI 210
>gi|312130417|ref|YP_003997757.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella
byssophila DSM 17132]
gi|311906963|gb|ADQ17404.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella
byssophila DSM 17132]
Length = 445
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 3/242 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+++ G Y +IS F + +P + RG A+ ++ AISDF AIQ +P
Sbjct: 31 GVSKSKSGDYLGSISAFSTAINMNPDNASSYFNRGLAKQALKDHRGAISDFDRAIQISPK 90
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
++ R ++++ E+ A+QD + A+E P +RG++ K D AV D +
Sbjct: 91 DALSYHYRAISKSSQDENGAALQDFNIAIELSPKDVQSYLQRGVLFAKLNDLPLAVRDFN 150
Query: 508 ACVKLD---KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
V+L+ +E A+ GL + +G+YK A + AI+ + + + + Y +
Sbjct: 151 KVVELNPSAQEKFQAFYSRGLCKAKMGDYKGAIADYSSAIESNNKRPQPFLERGKNYIKV 210
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
EKAL L + + +D + ++ + LRG L A D S L +DP+ E Y
Sbjct: 211 EEFEKALGDLNEAIKMDAQSAEGFALRGFAKSRLRDFNGAKIDFDSALRLDPNLKEAYYG 270
Query: 625 RA 626
RA
Sbjct: 271 RA 272
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 168/377 (44%), Gaps = 51/377 (13%)
Query: 315 SASLNDSNTNSES-YSKSSISDNKSSDSTESRSKLSFKWDMLKETSN---------EAKR 364
SA+LN + S Y +S +KS D S S S +M + ++ +A +
Sbjct: 13 SAALNSYGQQTASDYFDLGVSKSKSGDYLGSISAFSTAINMNPDNASSYFNRGLAKQALK 72
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+ + ++ ++ IS LS R I++ ++ + +A+ F+ ++ P ++ + R
Sbjct: 73 DHRGAISDFDRAIQISPKDALSYHYRAISKSSQDENGAALQDFNIAIELSPKDVQSYLQR 132
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGE---AWKRRGQARAALGESVEAIQDLSKALEF 478
G A +L A+ DF + ++ NPSA E A+ RG +A +G+ AI D S A+E
Sbjct: 133 GVLFAKLNDLPLAVRDFNKVVELNPSAQEKFQAFYSRGLCKAKMGDYKGAIADYSSAIES 192
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
ERG K ++F A+ DL+ +K+D ++ + G A S + ++ A+
Sbjct: 193 NNKRPQPFLERGKNYIKVEEFEKALGDLNEAIKMDAQSAEGFALRGFAKSRLRDFNGAKI 252
Query: 539 AHLKAIQLDRNFLEAW----GHLTQFY-------------------QDLAN-----SEKA 570
A++LD N EA+ LT Y +D+ N S+
Sbjct: 253 DFDSALRLDPNLKEAYYGRAFALTMLYNHKIAIDDLGKILDTKSSTKDVKNQYVTLSKAQ 312
Query: 571 LECLQQ-VLY------IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L+ L++ V Y + + S+ Y +RGL K A+ DL+ + I+P + +
Sbjct: 313 LDKLREAVTYTFPIPALSEDLSEGYFVRGLAQLRGNNTKDALSDLNKSIEINPIYPQAYF 372
Query: 624 LRASCYHAIGEYREAVI 640
+R A+G EAVI
Sbjct: 373 VRGMAKSAMGMQTEAVI 389
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 11/255 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ + G Y AI+ + ++ + P+ + RG E E A+ D EAI+ +
Sbjct: 168 SRGLCKAKMGDYKGAIADYSSAIESNNKRPQPFLERGKNYIKVEEFEKALGDLNEAIKMD 227
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ E + RG A++ L + A D AL +PN + + R + A++D
Sbjct: 228 AQSAEGFALRGFAKSRLRDFNGAKIDFDSALRLDPNLKEAYYGRAFALTMLYNHKIAIDD 287
Query: 506 LSACVKLDKENKSAYT-YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
L + K Y+ L+ + + + ++A L + E + F + L
Sbjct: 288 LGKILDTKSSTKDVKNQYVTLSKAQLDKLREAVTYTFPIPALSEDLSEGY-----FVRGL 342
Query: 565 A-----NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
A N++ AL L + + I+ + +AY +RG+ +G +A+ D S L + P+
Sbjct: 343 AQLRGNNTKDALSDLNKSIEINPIYPQAYFVRGMAKSAMGMQTEAVIDFGSALKLHPAYP 402
Query: 620 ECLYLRASCYHAIGE 634
E Y+R +IGE
Sbjct: 403 EAYYVRGLIKVSIGE 417
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E RG A+ + A+SD ++I+ NP +A+ RG A++A+G EA+ D A
Sbjct: 335 EGYFVRGLAQLRGNNTKDALSDLNKSIEINPIYPQAYFVRGMAKSAMGMQTEAVIDFGSA 394
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
L+ P + + RG++ + NA DLS +L N AYT +
Sbjct: 395 LKLHPAYPEAYYVRGLIKVSIGETNAGCVDLSRAGELGYAN--AYTLI 440
>gi|225619900|ref|YP_002721157.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225214719|gb|ACN83453.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 660
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 3/255 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA-IQS 444
SRG+++ N G Y AI F++ L+ DP + +A R + A AI DF + I+
Sbjct: 110 SRGVSKYNLGLYEEAIKDFNKTLELDPDFKDAYFIRALSYAKINSHNEAIDDFNKLLIEY 169
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG ++ L EAI+D + AL+ PN + I ++R + F A+
Sbjct: 170 DEINYIYYYYRGLSKFNLNLFEEAIKDFTIALDDLPNESYIYYDRALAYSNLNMFENAIN 229
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L+K + +Y L S + EY KA E + K ++L+ N EA ++ Q+L
Sbjct: 230 DYNRVIELNKNDIDSYYNRALTYSKLEEYDKAIEDYNKVLELNPNDKEAVYNMALCKQNL 289
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+A++ ++ D F Y+ G+ L ++++AI + + + ++P + +
Sbjct: 290 ELFEEAIKDFNNIIDSDNIF--VYYSLGICYLELERYEEAIDNFDAFIKLNPDYPDAYFY 347
Query: 625 RASCYHAIGEYREAV 639
R + + + Y EA+
Sbjct: 348 RGNAKYDLKHYEEAI 362
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 122/255 (47%), Gaps = 7/255 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G ++ N Y ++ FD+ L+ + Y A RG ++ E AI DF + ++ +P
Sbjct: 78 GTSKCNLKMYEESLKYFDKTLELNDKYGNAYHSRGVSKYNLGLYEEAIKDFNKTLELDPD 137
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKAL-EFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ R + A + EAI D +K L E++ + + RG+ F F A++D
Sbjct: 138 FKDAYFIRALSYAKINSHNEAIDDFNKLLIEYDEINYIYYYYRGLSKFNLNLFEEAIKDF 197
Query: 507 SACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + LD +Y Y LA S++ ++ A + + I+L++N ++++ + Y L
Sbjct: 198 T--IALDDLPNESYIYYDRALAYSNLNMFENAINDYNRVIELNKNDIDSYYNRALTYSKL 255
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+KA+E +VL ++ +A + L L ++AIKD ++ ID NI Y
Sbjct: 256 EEYDKAIEDYNKVLELNPNDKEAVYNMALCKQNLELFEEAIKDFNN--IIDSDNIFVYYS 313
Query: 625 RASCYHAIGEYREAV 639
CY + Y EA+
Sbjct: 314 LGICYLELERYEEAI 328
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 130/273 (47%), Gaps = 8/273 (2%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
I S +I V + L GI + +Y AI FD +K +P YP+A RG A+ +
Sbjct: 299 FNNIIDSDNIFVYYSL--GICYLELERYEEAIDNFDAFIKLNPDYPDAYFYRGNAKYDLK 356
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL---EFEPNSADIL 486
E AI D+ + ++ + +A+ R + L +AI+D +AL + + + A +
Sbjct: 357 HYEEAIDDYNKTLELDKLYIDAYYERAMVKINLNLYDDAIKDFDEALYNIDSDSDRAYLF 416
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ + IV K ++ A+E+ + ++L + Y +A + G K++ + + KAI L
Sbjct: 417 YLKAIVYEILKKYDEAIENYTNAIELGND---CYYKRAIAKHNAGLVKESIDDYNKAIDL 473
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + E + + DL E+A++ + + ++ F +AY+ RG+ L ++++ K
Sbjct: 474 EPDNYEIYSYKGNAELDLCLYEEAIKDFDKAIELNPNFDEAYYNRGIANDALKNYEESFK 533
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + ++ + S Y + EY +A+
Sbjct: 534 DYKMTVKLNEQHDYAFNNLGSYYVRLKEYDKAL 566
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 19/233 (8%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A GT++ + E ++ F + ++ N G A+ RG ++ LG EAI+D +K L
Sbjct: 73 AYYNIGTSKCNLKMYEESLKYFDKTLELNDKYGNAYHSRGVSKYNLGLYEEAIKDFNKTL 132
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSA-CVKLDKENKSAYTYLGLALSSIGEYKK 535
E +P+ D R + K N A++D + ++ D+ N Y Y GL+ ++ +++
Sbjct: 133 ELDPDFKDAYFIRALSYAKINSHNEAIDDFNKLLIEYDEINYIYYYYRGLSKFNLNLFEE 192
Query: 536 AEEAHLKA---------IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
A + A I DR A+ +L F E A+ +V+ ++K
Sbjct: 193 AIKDFTIALDDLPNESYIYYDRAL--AYSNLNMF-------ENAINDYNRVIELNKNDID 243
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+Y+ R L L ++ KAI+D + L ++P++ E +Y A C + + EA+
Sbjct: 244 SYYNRALTYSKLEEYDKAIEDYNKVLELNPNDKEAVYNMALCKQNLELFEEAI 296
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+I D+ +AI P E + +G A L EAI+D KA+E PN + + RGI N
Sbjct: 463 SIDDYNKAIDLEPDNYEIYSYKGNAELDLCLYEEAIKDFDKAIELNPNFDEAYYNRGIAN 522
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
K++ + +D VKL++++ A+ LG + EY KA E KA++++
Sbjct: 523 DALKNYEESFKDYKMTVKLNEQHDYAFNNLGSYYVRLKEYDKALENFYKALEIN 576
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 16/222 (7%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD- 437
+ +D R + ++N Y AI FD+ L I + RA+ L+A + +
Sbjct: 374 LYIDAYYERAMVKINLNLYDDAIKDFDEALYN--------IDSDSDRAYLFYLKAIVYEI 425
Query: 438 ---FTEAIQSNPSAGEA----WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ EAI++ +A E + +R A+ G E+I D +KA++ EP++ +I +G
Sbjct: 426 LKKYDEAIENYTNAIELGNDCYYKRAIAKHNAGLVKESIDDYNKAIDLEPDNYEIYSYKG 485
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ A++D ++L+ AY G+A ++ Y+++ + + ++L+
Sbjct: 486 NAELDLCLYEEAIKDFDKAIELNPNFDEAYYNRGIANDALKNYEESFKDYKMTVKLNEQH 545
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
A+ +L +Y L +KALE + L I+ S Y+ G
Sbjct: 546 DYAFNNLGSYYVRLKEYDKALENFYKALEINSELSLPYNNIG 587
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R IA+ N G +I +++ + +P E +G A E AI DF +AI+ NP
Sbjct: 450 RAIAKHNAGLVKESIDDYNKAIDLEPDNYEIYSYKGNAELDLCLYEEAIKDFDKAIELNP 509
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG A AL E+ +D ++ + G + K+++ A+E+
Sbjct: 510 NFDEAYYNRGIANDALKNYEESFKDYKMTVKLNEQHDYAFNNLGSYYVRLKEYDKALENF 569
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYK 534
++++ E L L ++IGE K
Sbjct: 570 YKALEINSE-------LSLPYNNIGEVK 590
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 26/169 (15%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAF-----CYSQLELHKHVIRDCDKALQLDPT 101
C+L+ + ++++ D L E+ D A+ L L++ I+D +K L+LDP
Sbjct: 82 CNLKMYEESLKYFDKTL----ELNDKYGNAYHSRGVSKYNLGLYEEAIKDFNKTLELDPD 137
Query: 102 LLQAYILKGCAFSALGRKEEALSVWEK--------GYEHALHQSA---DLKQFLELEELL 150
AY ++ +++ + EA+ + K Y + ++ +L F E +
Sbjct: 138 FKDAYFIRALSYAKINSHNEAIDDFNKLLIEYDEINYIYYYYRGLSKFNLNLFEEAIKDF 197
Query: 151 TAAKQD--RSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDI 197
T A D YD + + S+L + E+ +N +++ E NK+DI
Sbjct: 198 TIALDDLPNESYIYYDRALAYSNLNMFENAINDYNRVIEL----NKNDI 242
>gi|218438974|ref|YP_002377303.1| hypothetical protein PCC7424_2005 [Cyanothece sp. PCC 7424]
gi|218171702|gb|ACK70435.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 512
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 139/293 (47%), Gaps = 9/293 (3%)
Query: 329 SKSSISDNKSSDSTESRSKL----SFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
S S+ K+ D R + FKW + +T + N+ F VT ++K++ D
Sbjct: 209 SSLSVEQQKTVDEIAERERTVRINHFKWGIPVQTYLD---NQSFIVTSMAKTQQ--ADKL 263
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ G N+G+Y AI +++ L+ Y EA G G + + AI + +A++
Sbjct: 264 VEEGKQLRNQGQYEEAIESYNKALEFKSDYHEAWYGLGYSLNELERYQKAIESYNKALEF 323
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
EAW G + L EAI+ +KALEF+ + + + G + + + A+E
Sbjct: 324 KSDYHEAWYGLGYSLNELERYQEAIESYNKALEFKSDYHEAWYGLGYSLNELERYQEAIE 383
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++ + A+ LG +L+ + Y++A +++ KA++ ++ EAW + L
Sbjct: 384 SYNKALEFKSDYHEAWYGLGYSLNKLERYQEAIKSYDKALEFKSDYHEAWYGRGVSLRRL 443
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++A++ + L ID ++ RGL L L ++++AIK L IDP+
Sbjct: 444 ERYDEAIQSYDKALEIDPNNPLYWNSRGLSLQNLKRYEEAIKSYDKALEIDPN 496
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 105/222 (47%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L+ G Q + E AI + +A++ EAW G + L +AI+ +KALE
Sbjct: 263 LVEEGKQLRNQGQYEEAIESYNKALEFKSDYHEAWYGLGYSLNELERYQKAIESYNKALE 322
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F+ + + + G + + + A+E + ++ + A+ LG +L+ + Y++A
Sbjct: 323 FKSDYHEAWYGLGYSLNELERYQEAIESYNKALEFKSDYHEAWYGLGYSLNELERYQEAI 382
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
E++ KA++ ++ EAW L L ++A++ + L + +A++ RG+ L
Sbjct: 383 ESYNKALEFKSDYHEAWYGLGYSLNKLERYQEAIKSYDKALEFKSDYHEAWYGRGVSLRR 442
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L ++ +AI+ L IDP+N R + Y EA+
Sbjct: 443 LERYDEAIQSYDKALEIDPNNPLYWNSRGLSLQNLKRYEEAI 484
>gi|158521784|ref|YP_001529654.1| hypothetical protein Dole_1773 [Desulfococcus oleovorans Hxd3]
gi|158510610|gb|ABW67577.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 318
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 1/230 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q+ + K AI++F + ++++P +A RG A + +L+ AI DF+ AI+ +P
Sbjct: 41 GLEQMRQSKPDQAIALFSKAIEDNPNRAKAYYHRGNAYGIKHDLDNAIDDFSTAIELDPL 100
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ R A GE A+ D + A+E P S +RGIV ++ +AA +D +
Sbjct: 101 FLDAYIGRATAFNQKGEIQNALSDFATAIEISPKSLVAYLKRGIVLYEQGALDAAADDFT 160
Query: 508 ACVKLDKENKS-AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + S AY + G+ L G+ +A + I ++ +A+ Y +L
Sbjct: 161 RVIEDQPLSASVAYYHRGMILKKKGQLLQALADLTRVIDIEPGLTKAYAARGDLYFELGE 220
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+KA++ ++L + +A+ LRG G +AIKD L IDP
Sbjct: 221 YDKAIDDAGRMLTVFPLEMRAFVLRGDAWKAKGDLARAIKDYERALSIDP 270
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 3/214 (1%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q + + AI+ F++AI+ NP+ +A+ RG A + AI D S A+E +P D
Sbjct: 47 QSKPDQAIALFSKAIEDNPNRAKAYYHRGNAYGIKHDLDNAIDDFSTAIELDPLFLDAYI 106
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
R + + A+ D + +++ ++ AY G+ L G A + + I+ D
Sbjct: 107 GRATAFNQKGEIQNALSDFATAIEISPKSLVAYLKRGIVLYEQGALDAAADDFTRVIE-D 165
Query: 548 RNFLE--AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ A+ H + +AL L +V+ I+ +KAY RG L LG++ KAI
Sbjct: 166 QPLSASVAYYHRGMILKKKGQLLQALADLTRVIDIEPGLTKAYAARGDLYFELGEYDKAI 225
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D L + P + LR + A G+ A+
Sbjct: 226 DDAGRMLTVFPLEMRAFVLRGDAWKAKGDLARAI 259
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+ +D + R A +G+ +A+S F ++ P A + RG Q L+AA D
Sbjct: 99 PLFLDAYIGRATAFNQKGEIQNALSDFATAIEISPKSLVAYLKRGIVLYEQGALDAAADD 158
Query: 438 FTEAIQSNP-SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
FT I+ P SA A+ RG G+ ++A+ DL++ ++ EP RG + F+
Sbjct: 159 FTRVIEDQPLSASVAYYHRGMILKKKGQLLQALADLTRVIDIEPGLTKAYAARGDLYFEL 218
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+++ A++D + + A+ G A + G+ +A + + +A+ +D F A
Sbjct: 219 GEYDKAIDDAGRMLTVFPLEMRAFVLRGDAWKAKGDLARAIKDYERALSIDPEFAAA 275
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 371 TRISKSKSISVDF-RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
TR+ + + +S RG+ +G+ A++ +++ +P +A RG
Sbjct: 160 TRVIEDQPLSASVAYYHRGMILKKKGQLLQALADLTRVIDIEPGLTKAYAARGDLYFELG 219
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E + AI D + P A+ RG A A G+ AI+D +AL +P A L ++
Sbjct: 220 EYDKAIDDAGRMLTVFPLEMRAFVLRGDAWKAKGDLARAIKDYERALSIDPEFAAALEKK 279
Query: 490 GIVNFKFKDFNAAVEDLS-AC 509
G+ + D A + + AC
Sbjct: 280 GMALLETDDITGACQAFAQAC 300
>gi|186683665|ref|YP_001866861.1| hypothetical protein Npun_R3512 [Nostoc punctiforme PCC 73102]
gi|186466117|gb|ACC81918.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 535
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 7/251 (2%)
Query: 394 EGKYASAISIFDQILKEDPMYPEA-----LIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
E K I I D + ++D PE+ L+ +G +E EAAI+ + +A++ P
Sbjct: 200 EQKIEKVIEIQDLLTEKDQ--PESRKAGLLVEQGNLLDAAKEYEAAITSYNQALKFQPDY 257
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
+AW +G+A LG EA+ +AL+F+P+ +L+ +GI + + + A+ +
Sbjct: 258 YQAWNNQGKALRNLGRYEEALASFEQALKFQPDDYIVLNNKGIELWNLRRYEEALASYNE 317
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
V++ ++ A+ G+ L + Y++A ++ +A+Q+ ++ EAW + L E
Sbjct: 318 AVQIKPDDPQAWYNRGITLWDLERYEEALASYNEAVQIKPDYQEAWHNQGNTLGKLERYE 377
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
+AL + + I +A+H +G L LG ++A+ + L I P + Y R
Sbjct: 378 EALASYVRTVTIQPDKHEAWHGKGFALGQLGCDEEALTAFNEALKIKPDYHQAWYNRGHA 437
Query: 629 YHAIGEYREAV 639
+G EA+
Sbjct: 438 LSNLGRNEEAI 448
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 10/289 (3%)
Query: 340 DSTESRSKLSFKWDMLKETSN--EAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNE 394
D ESR K +L E N +A + + +T +++ D+ + +G A N
Sbjct: 217 DQPESR-----KAGLLVEQGNLLDAAKEYEAAITSYNQALKFQPDYYQAWNNQGKALRNL 271
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A++ F+Q LK P L +G R E A++ + EA+Q P +AW
Sbjct: 272 GRYEEALASFEQALKFQPDDYIVLNNKGIELWNLRRYEEALASYNEAVQIKPDDPQAWYN 331
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG L EA+ ++A++ +P+ + H +G K + + A+ V +
Sbjct: 332 RGITLWDLERYEEALASYNEAVQIKPDYQEAWHNQGNTLGKLERYEEALASYVRTVTIQP 391
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G AL +G ++A A +A+++ ++ +AW + +L +E+A+
Sbjct: 392 DKHEAWHGKGFALGQLGCDEEALTAFNEALKIKPDYHQAWYNRGHALSNLGRNEEAIASY 451
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
Q L I + A++ +G L LG+ K+ K ++ + I+P ++ ++
Sbjct: 452 DQALKIKPDYHYAWYYKGAALIKLGRWKEGNKSINKAIEINPDFVKNIF 500
>gi|309791531|ref|ZP_07686033.1| TPR repeat-containing protein [Oscillochloris trichoides DG-6]
gi|308226456|gb|EFO80182.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
Length = 450
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 132/271 (48%), Gaps = 9/271 (3%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I++D R RG + G++ A+ F + ++ P L RG R
Sbjct: 19 SRAIAIDPNYAWARYQRGQIYRDMGRHDDALEDFSRAIELAPDDAAFLAERGETYRVMRR 78
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A++DF++AI + A RGQ +L EA+ DLS+A+E P+ + ++ ERG
Sbjct: 79 YDEALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRAIELRPSMSWVIAERG 138
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + A+ D + V + + A + +A Y +A AIQLD +
Sbjct: 139 ELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQERYTEALADLEAAIQLDSS- 197
Query: 551 LEAWGHLTQF-YQDLA-NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+AW + + Q L+ N ++ALE L + + +D ++ A RG +GQ +A++DL
Sbjct: 198 -QAWLYAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRTMGQTDEALEDL 256
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
S + +DP I L RA+ Y ++ Y EA+
Sbjct: 257 SRAIDLDPGYIWALSQRATLYRSLRRYDEAL 287
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 112/244 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A++ F Q + D Y AL RG R + A++D + AI+ PS R
Sbjct: 78 RYDEALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRAIELRPSMSWVIAER 137
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ LG + EAI D ++A+ +P+ L R I + + + A+ DL A ++LD
Sbjct: 138 GELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQERYTEALADLEAAIQLDSS 197
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
Y G A G +A E +AI LD N+ A + + +++ALE L
Sbjct: 198 QAWLYAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRTMGQTDEALEDLS 257
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + +D + A R L L ++ +A+ D S + ++PS++ L R + Y
Sbjct: 258 RAIDLDPGYIWALSQRATLYRSLRRYDEALADFSRVIDLNPSHVSALAERGEIHRLHKRY 317
Query: 636 REAV 639
EA+
Sbjct: 318 EEAI 321
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 89/169 (52%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A++ F +++ +P + AL RG + E AI+DF+ AI++ A R
Sbjct: 282 RYDEALADFSRVIDLNPSHVSALAERGEIHRLHKRYEEAIADFSRAIEAKSDYAWAIGSR 341
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
GQA AL + EA++D ++A E P+ A I+ ERG + + A+ DLS ++L+ +
Sbjct: 342 GQALRALNRNSEALEDFTRAAELRPDEAWIVAERGETLRLLRRYEEAITDLSKAIELNPQ 401
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ AY+ G A S+ +++A +A+++D N AW ++ +
Sbjct: 402 DSWAYSRRGAAYQSLKIFEEAFIDLTRAVEIDPNNAWAWAQRGSLFRQM 450
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 4/248 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG AQ G A+ + + DP Y AL RG AR + + A+ D + AI +P
Sbjct: 205 RGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRTMGQTDEALEDLSRAIDLDP 264
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A +R +L EA+ D S+ ++ P+ L ERG ++ K + A+ D
Sbjct: 265 GYIWALSQRATLYRSLRRYDEALADFSRVIDLNPSHVSALAERGEIHRLHKRYEEAIADF 324
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQDL 564
S ++ + A G AL ++ +A E +A +L + EAW + + L
Sbjct: 325 SRAIEAKSDYAWAIGSRGQALRALNRNSEALEDFTRAAELRPD--EAWIVAERGETLRLL 382
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+A+ L + + ++ + S AY RG L ++A DL+ + IDP+N
Sbjct: 383 RRYEEAITDLSKAIELNPQDSWAYSRRGAAYQSLKIFEEAFIDLTRAVEIDPNNAWAWAQ 442
Query: 625 RASCYHAI 632
R S + +
Sbjct: 443 RGSLFRQM 450
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 5/269 (1%)
Query: 376 SKSISVDFRLSRGIAQVNE-----GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I + +S IA+ E G+ AIS F Q + P Y AL R A Q
Sbjct: 121 SRAIELRPSMSWVIAERGELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQER 180
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
A++D AIQ + S + RG+A+ G EA++DLS+A++ +PN A L RG
Sbjct: 181 YTEALADLEAAIQLDSSQAWLYAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRG 240
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ A+EDLS + LD A + S+ Y +A + I L+ +
Sbjct: 241 AARRTMGQTDEALEDLSRAIDLDPGYIWALSQRATLYRSLRRYDEALADFSRVIDLNPSH 300
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ A + ++ E+A+ + + ++ A RG L L ++ +A++D +
Sbjct: 301 VSALAERGEIHRLHKRYEEAIADFSRAIEAKSDYAWAIGSRGQALRALNRNSEALEDFTR 360
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ P + R + Y EA+
Sbjct: 361 AAELRPDEAWIVAERGETLRLLRRYEEAI 389
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 34/242 (14%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
EAA+SDF+ AI +P+ A +RGQ +G +A++D S+A+E P+ A L ERG
Sbjct: 12 EAALSDFSRAIAIDPNYAWARYQRGQIYRDMGRHDDALEDFSRAIELAPDDAAFLAERGE 71
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA--------------- 536
+ ++ A+ D S + LD + A G S+ Y +A
Sbjct: 72 TYRVMRRYDEALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRAIELRPSMS 131
Query: 537 ----EEAHL---------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
E L +A+ + +++ A GH Y++ +AL L+
Sbjct: 132 WVIAERGELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQERYTEALADLEAA 191
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
+ +D + Y RG G +A++DLS + +DP+ L R + +G+ E
Sbjct: 192 IQLDSSQAWLYAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRTMGQTDE 251
Query: 638 AV 639
A+
Sbjct: 252 AL 253
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 369 CVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TA 424
+T S++ ++ D+ SRG + +Y A++ + ++ P + RG
Sbjct: 82 ALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRAIELRPSMSWVIAERGELL 141
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
R R EA ISDFT+A+ P A R A EA+ DL A++ + + A
Sbjct: 142 RTLGRTDEA-ISDFTQAVTIQPDYVWALGHRAIAYREQERYTEALADLEAAIQLDSSQAW 200
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ ERG + + A+EDLS + LD A G A ++G+ +A E +AI
Sbjct: 201 LYAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRTMGQTDEALEDLSRAI 260
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
LD ++ A Y+ L ++AL +V+ ++ A RG + ++++A
Sbjct: 261 DLDPGYIWALSQRATLYRSLRRYDEALADFSRVIDLNPSHVSALAERGEIHRLHKRYEEA 320
Query: 605 IKDLSSGL 612
I D S +
Sbjct: 321 IADFSRAI 328
>gi|359464391|ref|ZP_09252954.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris sp. CCMEE 5410]
Length = 654
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ Y +A+S +DQ L D + A RG + R+ + A+ D+ +AI+ NP
Sbjct: 398 RGLAKYGLQNYQAALSDYDQALTLDDRHANAYGNRGLTKHALRDYQGAVEDYNQAIRLNP 457
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG ++ L + A+ D +AL +P D L RG +++ F AA+ D
Sbjct: 458 QYAYVYHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGKFRAALADY 517
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--HLTQFYQDL 564
++LD ++ +AY A +G++K KA++LD ++++ L Q+ +
Sbjct: 518 DQAIRLDGKHANAYNGRAHAKGKLGDWKGELADFDKALELDDQLIDSYNGRGLAQY--NR 575
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
N +A++ + L I+ ++ AY RG +
Sbjct: 576 KNYREAIQDYNRALRIEPDYAVAYFNRGFV 605
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 19/259 (7%)
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
N V+ +S+S+++ L G + Y AI+ +D+ + D +A RG A
Sbjct: 347 NNTVSVSPMSQSEAL-----LRSGYEKYRAKDYEGAIADYDESIDLDDQNADAFNERGLA 401
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ + +AA+SD+ +A+ + A+ RG + AL + A++D ++A+ P A
Sbjct: 402 KYGLQNYQAALSDYDQALTLDDRHANAYGNRGLTKHALRDYQGAVEDYNQAIRLNPQYAY 461
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ H RG+ + KD A+ D +++D + + G +G+++ A + +AI
Sbjct: 462 VYHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGKFRAALADYDQAI 521
Query: 545 QLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+LD A+ G L + +LA+ +KALE +D + +Y+ RGL +
Sbjct: 522 RLDGKHANAYNGRAHAKGKLGDWKGELADFDKALE-------LDDQLIDSYNGRGLAQYN 574
Query: 598 LGQHKKAIKDLSSGLGIDP 616
+++AI+D + L I+P
Sbjct: 575 RKNYREAIQDYNRALRIEP 593
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EAL+ G + ++ E AI+D+ E+I + +A+ RG A+ L A+ D +A
Sbjct: 359 EALLRSGYEKYRAKDYEGAIADYDESIDLDDQNADAFNERGLAKYGLQNYQAALSDYDQA 418
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L + A+ RG+ +D+ AVED + ++L+ + Y G++ ++ + +
Sbjct: 419 LTLDDRHANAYGNRGLTKHALRDYQGAVEDYNQAIRLNPQYAYVYHNRGVSKYNLKDLQG 478
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + +A+++D + + + + DL AL Q + +D + + AY+ R
Sbjct: 479 ALSDYDQALRIDPKREDTLRNRGRIHYDLGKFRAALADYDQAIRLDGKHANAYNGRAHAK 538
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG K + D L +D I+ R + YREA+
Sbjct: 539 GKLGDWKGELADFDKALELDDQLIDSYNGRGLAQYNRKNYREAI 582
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ N A+S +DQ L+ DP + L RG + AA++D+ +AI+ +
Sbjct: 465 NRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGKFRAALADYDQAIRLD 524
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ R A+ LG+ + D KALE + D + RG+ + K++ A++D
Sbjct: 525 GKHANAYNGRAHAKGKLGDWKGELADFDKALELDDQLIDSYNGRGLAQYNRKNYREAIQD 584
Query: 506 LSACVKLDKENKSAYTYLGLA 526
+ ++++ + AY G
Sbjct: 585 YNRALRIEPDYAVAYFNRGFV 605
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 86/169 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + Y A+ ++Q ++ +P Y RG ++ ++L+ A+SD+ +A++ +
Sbjct: 431 NRGLTKHALRDYQGAVEDYNQAIRLNPQYAYVYHNRGVSKYNLKDLQGALSDYDQALRID 490
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG+ LG+ A+ D +A+ + A+ + R K D+ + D
Sbjct: 491 PKREDTLRNRGRIHYDLGKFRAALADYDQAIRLDGKHANAYNGRAHAKGKLGDWKGELAD 550
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
++LD + +Y GLA + Y++A + + +A++++ ++ A+
Sbjct: 551 FDKALELDDQLIDSYNGRGLAQYNRKNYREAIQDYNRALRIEPDYAVAY 599
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 441 AIQSN------P-SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AIQ+N P S EA R G + + AI D ++++ + +AD +ERG+
Sbjct: 343 AIQANNTVSVSPMSQSEALLRSGYEKYRAKDYEGAIADYDESIDLDDQNADAFNERGLAK 402
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ +++ AA+ D + LD + +AY GL ++ +Y+ A E + +AI+L+ +
Sbjct: 403 YGLQNYQAALSDYDQALTLDDRHANAYGNRGLTKHALRDYQGAVEDYNQAIRLNPQYAYV 462
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ + +L + + AL Q L ID + RG + + LG+ + A+ D +
Sbjct: 463 YHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGKFRAALADYDQAIR 522
Query: 614 IDPSNIECLYLRASCYHAIGEYR 636
+D + RA +G+++
Sbjct: 523 LDGKHANAYNGRAHAKGKLGDWK 545
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D RG+AQ N Y AI +++ L+ +P Y A RG + Q ++E A +DF +
Sbjct: 562 IDSYNGRGLAQYNRKNYREAIQDYNRALRIEPDYAVAYFNRGFVKEVQNDVEGAKADFQK 621
Query: 441 A 441
A
Sbjct: 622 A 622
>gi|110637714|ref|YP_677921.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
gi|110280395|gb|ABG58581.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
Length = 515
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+++ EG AI+ F +K D Y EA R E +I+D+++ I P
Sbjct: 239 RGMSKSKEGFRDEAIADFTTAIKYDSSYAEAYQNRAHELFLLSRYEESITDYSKVIALQP 298
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RGQ++A G+ VEAI D +KA+ PN RG +F+ A++D
Sbjct: 299 DNFQAYFGRGQSKAEFGKHVEAIADYNKAIVLYPNFTYAYFYRGFSKSYLDNFSDAIKDF 358
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++LD + AY G+Y+ A + + K I L + EA+ + +
Sbjct: 359 NKAIQLDPNDHPAYFNRAYCKREEGDYEGAIKDYNKCISLKPQYEEAYFQKANTLYMMGD 418
Query: 567 SEKALECLQQVLYIDKRF---SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
A++ +++ K+F S AY RG + + K+A+ D + + ++ +N E
Sbjct: 419 KTAAIKEYDEIV---KKFPNESAAYANRGFFNMNIKKDKEAMDDFNKAITLNENNPEAYR 475
Query: 624 LRA 626
RA
Sbjct: 476 YRA 478
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 146/340 (42%), Gaps = 16/340 (4%)
Query: 310 KLSSDSASLNDSNTNSESYSKSSISDNKSSDS--TESRSKLSFKWDMLKETSNEAK---- 363
KLS +S +S N+ Y+ SSI + K D + R SF W + ++ K
Sbjct: 90 KLSYESL---ESAFNAGKYT-SSIDEVKVGDVYIAKIRESKSFAWIKITHIEDDGKSKAT 145
Query: 364 --RNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + +I + G+ +G + A F DP EA
Sbjct: 146 GGNNNDYIEFEYTVFSNIDTHGTFNEGLELFKKGNFIGAYDKFKAAAVADPNGYEAYYYM 205
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + + AAI++F +AI P A+ +RG +++ G EAI D + A++++ +
Sbjct: 206 GLCKMELGDYPAAITNFDKAIDIKPKYTAAFSKRGMSKSKEGFRDEAIADFTTAIKYDSS 265
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A+ R F + ++ D S + L +N AY G + + G++ +A +
Sbjct: 266 YAEAYQNRAHELFLLSRYEESITDYSKVIALQPDNFQAYFGRGQSKAEFGKHVEAIADYN 325
Query: 542 KAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
KAI L NF A+ + ++ Y D N A++ + + +D AY R G
Sbjct: 326 KAIVLYPNFTYAYFYRGFSKSYLD--NFSDAIKDFNKAIQLDPNDHPAYFNRAYCKREEG 383
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ AIKD + + + P E + +A+ + +G+ A+
Sbjct: 384 DYEGAIKDYNKCISLKPQYEEAYFQKANTLYMMGDKTAAI 423
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 110/220 (50%), Gaps = 2/220 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y +I+ + +++ P +A GRG ++A F + +EA I+D+ +AI P+ A+
Sbjct: 282 RYEESITDYSKVIALQPDNFQAYFGRGQSKAEFGKHVEA-IADYNKAIVLYPNFTYAYFY 340
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG +++ L +AI+D +KA++ +PN R + D+ A++D + C+ L
Sbjct: 341 RGFSKSYLDNFSDAIKDFNKAIQLDPNDHPAYFNRAYCKREEGDYEGAIKDYNKCISLKP 400
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + AY L +G+ A + + + ++ N A+ + F ++ ++A++
Sbjct: 401 QYEEAYFQKANTLYMMGDKTAAIKEYDEIVKKFPNESAAYANRGFFNMNIKKDKEAMDDF 460
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + +++ +AY R +L + + A DL+ + +
Sbjct: 461 NKAITLNENNPEAYRYRAVLKSEIKDKEGACADLAKAVAL 500
>gi|425452343|ref|ZP_18832160.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 7941]
gi|389765891|emb|CCI08329.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 7941]
Length = 436
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 1/262 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+I++ + +RG+ + + KY A++ F + + +P Y EA + RG Q +
Sbjct: 35 TQIAQGNNQDAIGHYNRGVDYIQQEKYDLALAEFTKAININPRYAEAYLNRGFLYEQQEK 94
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A+SDF +AI NP EA+ RG G+S A+ D ++AL P +A + RG
Sbjct: 95 PDLALSDFNQAININPRLAEAYNNRGLLYYEQGKSDLALSDFNQALNINPRNATAYYNRG 154
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + + A+ D + + ++ + AY G G+ A + +A+ ++ +
Sbjct: 155 NLYKEQGKPDLALFDYNQALNINPRDAEAYLNRGFLYHEQGKPDLALFDYNQALNINPLY 214
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ + Y + + AL Q + I+ R++ AY+ RGLL G+ A+ D +
Sbjct: 215 ALAYLNRGNLYHEQGKPDLALSDFNQAININPRYAMAYNNRGLLYQQQGKLNLALFDYNQ 274
Query: 611 GLGIDPSNIECLYLRASCYHAI 632
+ I+P YL +A+
Sbjct: 275 AININPR-YAMAYLNRGVLYAV 295
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 128/294 (43%), Gaps = 27/294 (9%)
Query: 361 EAKRNKKFCVTRISK--------SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQI 407
EA N+ F + K +++I+++ RL+ RG+ +GK A+S F+Q
Sbjct: 80 EAYLNRGFLYEQQEKPDLALSDFNQAININPRLAEAYNNRGLLYYEQGKSDLALSDFNQA 139
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
L +P A RG Q + + A+ D+ +A+ NP EA+ RG G+
Sbjct: 140 LNINPRNATAYYNRGNLYKEQGKPDLALFDYNQALNINPRDAEAYLNRGFLYHEQGKPDL 199
Query: 468 AIQDLSKALEFEP-------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
A+ D ++AL P N ++ HE+G + DFN A+ ++ AY
Sbjct: 200 ALFDYNQALNINPLYALAYLNRGNLYHEQGKPDLALSDFNQAI-------NINPRYAMAY 252
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL G+ A + +AI ++ + A+ + Y + AL Q + I
Sbjct: 253 NNRGLLYQQQGKLNLALFDYNQAININPRYAMAYLNRGVLYAVQGKPDLALSDFNQAINI 312
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ R ++AY+ RGLL + G+ A+ D + + I+P + R Y G+
Sbjct: 313 NPRLAEAYNNRGLLYYEQGKSDLALSDYNQAININPGYAQAYLNRGVLYAVQGK 366
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 130/298 (43%), Gaps = 36/298 (12%)
Query: 366 KKFCVTRISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
+K+ + +K+I+++ R L+RG + K A+S F+Q + +P EA
Sbjct: 59 EKYDLALAEFTKAININPRYAEAYLNRGFLYEQQEKPDLALSDFNQAININPRLAEAYNN 118
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG Q + + A+SDF +A+ NP A+ RG G+ A+ D ++AL P
Sbjct: 119 RGLLYYEQGKSDLALSDFNQALNINPRNATAYYNRGNLYKEQGKPDLALFDYNQALNINP 178
Query: 481 NSAD-------ILHERGIVNFKFKDFNAA--VEDLSACVKLDKENKSAYTYLG---LALS 528
A+ + HE+G + D+N A + L A L++ N Y G LALS
Sbjct: 179 RDAEAYLNRGFLYHEQGKPDLALFDYNQALNINPLYALAYLNRGN--LYHEQGKPDLALS 236
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
+ AI ++ + A+ + YQ AL Q + I+ R++ AY
Sbjct: 237 DFNQ----------AININPRYAMAYNNRGLLYQQQGKLNLALFDYNQAININPRYAMAY 286
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH-------AIGEYREAV 639
RG+L G+ A+ D + + I+P E R Y+ A+ +Y +A+
Sbjct: 287 LNRGVLYAVQGKPDLALSDFNQAININPRLAEAYNNRGLLYYEQGKSDLALSDYNQAI 344
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG +GK A+ ++Q L +P+Y A + RG Q + + A+SDF +AI
Sbjct: 185 LNRGFLYHEQGKPDLALFDYNQALNINPLYALAYLNRGNLYHEQGKPDLALSDFNQAINI 244
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ RG G+ A+ D ++A+ P A RG++ + A+
Sbjct: 245 NPRYAMAYNNRGLLYQQQGKLNLALFDYNQAININPRYAMAYLNRGVLYAVQGKPDLALS 304
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + ++ AY GL G+ A + +AI ++ + +A+ + Y
Sbjct: 305 DFNQAININPRLAEAYNNRGLLYYEQGKSDLALSDYNQAININPGYAQAYLNRGVLYAVQ 364
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ AL Q + I+ R ++AY RG+L + + +KAI+DL
Sbjct: 365 GKPDLALSDYNQAININPREAQAYANRGVLYYYRQEREKAIRDL 408
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 114/254 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +GK A+ ++Q L +P EA + RG Q + + A+ D+ +A+ N
Sbjct: 152 NRGNLYKEQGKPDLALFDYNQALNINPRDAEAYLNRGFLYHEQGKPDLALFDYNQALNIN 211
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG G+ A+ D ++A+ P A + RG++ + N A+ D
Sbjct: 212 PLYALAYLNRGNLYHEQGKPDLALSDFNQAININPRYAMAYNNRGLLYQQQGKLNLALFD 271
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ AY G+ + G+ A +AI ++ EA+ + Y +
Sbjct: 272 YNQAININPRYAMAYLNRGVLYAVQGKPDLALSDFNQAININPRLAEAYNNRGLLYYEQG 331
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
S+ AL Q + I+ +++AY RG+L G+ A+ D + + I+P + R
Sbjct: 332 KSDLALSDYNQAININPGYAQAYLNRGVLYAVQGKPDLALSDYNQAININPREAQAYANR 391
Query: 626 ASCYHAIGEYREAV 639
Y+ E +A+
Sbjct: 392 GVLYYYRQEREKAI 405
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++I+++ RL+ RG+ +GK A+S ++Q + +P Y +A + RG A Q +
Sbjct: 307 NQAININPRLAEAYNNRGLLYYEQGKSDLALSDYNQAININPGYAQAYLNRGVLYAVQGK 366
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+SD+ +AI NP +A+ RG E +AI+DL +A E D +E
Sbjct: 367 PDLALSDYNQAININPREAQAYANRGVLYYYRQEREKAIRDLRQAAELFRQQGDAFYE 424
>gi|367475911|ref|ZP_09475338.1| conserved exported hypothetical protein, TPR-like motif
[Bradyrhizobium sp. ORS 285]
gi|365271774|emb|CCD87806.1| conserved exported hypothetical protein, TPR-like motif
[Bradyrhizobium sp. ORS 285]
Length = 476
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP EA RG QR L+ A++D+ +AI+ P +A+ RG A G++ +A+Q
Sbjct: 151 DPNDAEAYELRGVVYTEQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQ 210
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++A+ +P+ R K + A+ D ++ D + Y GL +++
Sbjct: 211 DYNEAIRLDPDRPRTFTNRAAAYKKLGQIDKALADDHEAIRRDPKVPEYYDNRGLTYAAM 270
Query: 531 GEYKKAEEAHLKAIQLD--RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
EY KA + +AI+L NFL G QF +L + AL L +D F+ Y
Sbjct: 271 KEYDKAIADYDQAIKLQPKPNFLTNRGDSYQFKGELGS---ALSDYDAALRLDPNFALTY 327
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ R +L +G+ KA+ D + L +DP N
Sbjct: 328 NNRAVLFRKMGERAKALADYEAALRLDPGN 357
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + + A++ +DQ ++ P Y +A RG A + + E A+ D+ EAI+ +P
Sbjct: 161 RGVVYTEQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLDP 220
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ R A LG+ +A+ D +A+ +P + RG+ K+++ A+ D
Sbjct: 221 DRPRTFTNRAAAYKKLGQIDKALADDHEAIRRDPKVPEYYDNRGLTYAAMKEYDKAIADY 280
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+KL + + T G + GE A + A++LD NF + + ++ +
Sbjct: 281 DQAIKL-QPKPNFLTNRGDSYQFKGELGSALSDYDAALRLDPNFALTYNNRAVLFRKMGE 339
Query: 567 SEKALECLQQVLYIDK 582
KAL + L +D
Sbjct: 340 RAKALADYEAALRLDP 355
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQ-ARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ A+ D AI + A++ RG R A G++ +A DLS A+ +PN A+ R
Sbjct: 102 MSQALKDLDRAIALDGKNARAYRLRGDFMREAGGDAGKAAADLSMAISLDPNDAEAYELR 161
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+V + + + A+ D ++L + AY G+A G+ +KA + + +AI+LD +
Sbjct: 162 GVVYTEQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLDPD 221
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + Y+ L +KAL + + D + + Y RGL + ++ KAI D
Sbjct: 222 RPRTFTNRAAAYKKLGQIDKALADDHEAIRRDPKVPEYYDNRGLTYAAMKEYDKAIADYD 281
Query: 610 SGLGIDPSNIECLYLRASCYHAIGE 634
+ + P L R Y GE
Sbjct: 282 QAIKLQPKP-NFLTNRGDSYQFKGE 305
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A G+ A++ + ++ DP PE RG A +E + AI+D+ +AI+
Sbjct: 228 NRAAAYKKLGQIDKALADDHEAIRRDPKVPEYYDNRGLTYAAMKEYDKAIADYDQAIKLQ 287
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P RG + GE A+ D AL +PN A + R ++ K + A+ D
Sbjct: 288 PKP-NFLTNRGDSYQFKGELGSALSDYDAALRLDPNFALTYNNRAVLFRKMGERAKALAD 346
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
A ++LD N +A + + L+ I ++ L A
Sbjct: 347 YEAALRLDPGNDNAASGRRVMLAEIKKFGAEPPRPLNA 384
>gi|354567937|ref|ZP_08987104.1| Tetratricopeptide TPR_2 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353541611|gb|EHC11078.1| Tetratricopeptide TPR_2 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 539
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 3/246 (1%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+Y +AI ++Q L+ P + RG AR + E AI+D+T+AI NP+ +A+
Sbjct: 257 KGQYHAAIINYNQALQLYPYDADIYYKRGLARYQLGDYEGAIADYTQAITINPNYIKAYN 316
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+ G AR LG+ AI D + A+ PN R + + D A+ED + ++
Sbjct: 317 KSGLARYQLGDYEGAIADYTHAIIINPNDVVAYKNRADIRYYLGDKQGAIEDYTQVCQMY 376
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ L L IG+Y+ + L+ +L + A+ + DL + E A+
Sbjct: 377 PHPEAD---LNLKNMQIGDYQGEGDVFLQTSELKCHDFVAYKNRGDLRLDLGDYEGAIAD 433
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
Q + I+ + AY+ RG + LG + AI D + + I+ ++ + Y R + +G
Sbjct: 434 YTQAIKINSHDADAYYNRGNARYDLGDYAGAIADYTETIKINFNDADAYYNRGNARCCLG 493
Query: 634 EYREAV 639
+ + A+
Sbjct: 494 DKQGAI 499
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 142/309 (45%), Gaps = 15/309 (4%)
Query: 306 DVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRN 365
+ DK +S+S S+ NS +KSS+ K++ + +L+ + L +E
Sbjct: 203 NYQDKQTSNSESIYQVPHNS--LTKSSLYSVKNAKISSPSEELNLIYIKL---GDECSEK 257
Query: 366 KKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
++ I+ ++++ + D RG+A+ G Y AI+ + Q + +P Y +A
Sbjct: 258 GQYHAAIINYNQALQLYPYDADIYYKRGLARYQLGDYEGAIADYTQAITINPNYIKAYNK 317
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
G AR + E AI+D+T AI NP+ A+K R R LG+ AI+D ++ + P
Sbjct: 318 SGLARYQLGDYEGAIADYTHAIIINPNDVVAYKNRADIRYYLGDKQGAIEDYTQVCQMYP 377
Query: 481 NS-ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
+ AD+ + N + D+ + +L + AY G +G+Y+ A
Sbjct: 378 HPEADL----NLKNMQIGDYQGEGDVFLQTSELKCHDFVAYKNRGDLRLDLGDYEGAIAD 433
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ +AI+++ + +A+ + DL + A+ + + I+ + AY+ RG LG
Sbjct: 434 YTQAIKINSHDADAYYNRGNARYDLGDYAGAIADYTETIKINFNDADAYYNRGNARCCLG 493
Query: 600 QHKKAIKDL 608
+ AI D
Sbjct: 494 DKQGAIADF 502
>gi|254412886|ref|ZP_05026658.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180050|gb|EDX75042.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 456
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 117/242 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D LS+GIA +G Y AI+ +Q L+ +P +A RG + Q + AI DF E
Sbjct: 25 DTWLSQGIASFQQGDYRHAIAALNQALQINPDLAQAYHYRGMSHYCQGDALGAIGDFDEV 84
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P +A+ RG A L + A+QD ++AL+ + N A R ++ +D++
Sbjct: 85 LRLDPQNAQAYSDRGLILATLNDRWGAMQDYNQALQLDSNYAKGYLNRSMLRLALEDYDG 144
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D ++++ Y G+A + Y+ A +A+ ++ N A+ + +
Sbjct: 145 AIADCDQVIRMNPNLAEGYLNRGIARFEVEAYQDAIGDCDRALAINSNLAAAYFNRGMNH 204
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
L ++A+ VL ++ ++AY RG + LG++ +I+D + ++P +
Sbjct: 205 IALGAYQEAIADFNHVLELNPNDAQAYLNRGYVRLQLGENWSSIEDFDQAMRLEPVAAKA 264
Query: 622 LY 623
+
Sbjct: 265 FF 266
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 118/260 (45%), Gaps = 16/260 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+R + ++ Y AI+ DQ+++ +P E + RG AR + AI D A+
Sbjct: 130 LNRSMLRLALEDYDGAIADCDQVIRMNPNLAEGYLNRGIARFEVEAYQDAIGDCDRALAI 189
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + A+ RG ALG EAI D + LE PN A RG V + + +++E
Sbjct: 190 NSNLAAAYFNRGMNHIALGAYQEAIADFNHVLELNPNDAQAYLNRGYVRLQLGENWSSIE 249
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++L+ A+ + +A + E E+ K IQ L G+L YQ L
Sbjct: 250 DFDQAMRLEPVAAKAF-FQQIANTLNQEPDTVEDDESKLIQ----GLMVRGNLR--YQ-L 301
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD--------LSSGLGIDP 616
+ AL QVL +D +++AY+ R + +G ++ AI D L++ L +P
Sbjct: 302 GDYPAALNAYNQVLELDPNYTEAYNQRSTVRSAMGDYQGAIADLDMVKTLSLATPLSPEP 361
Query: 617 SNIECLYLRASCYHAIGEYR 636
++ YH IG ++
Sbjct: 362 VSVATDKPTPQEYHKIGVHK 381
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 125/279 (44%), Gaps = 26/279 (9%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG++ +G AI FD++L+ DP +A RG A + A+ D+ +A+Q +
Sbjct: 64 RGMSHYCQGDALGAIGDFDEVLRLDPQNAQAYSDRGLILATLNDRWGAMQDYNQALQLDS 123
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + + R R AL + AI D + + PN A+ RGI F+ + + A+ D
Sbjct: 124 NYAKGYLNRSMLRLALEDYDGAIADCDQVIRMNPNLAEGYLNRGIARFEVEAYQDAIGDC 183
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ +AY G+ ++G Y++A ++L+ N +A+ + L
Sbjct: 184 DRALAINSNLAAAYFNRGMNHIALGAYQEAIADFNHVLELNPNDAQAYLNRGYVRLQLGE 243
Query: 567 SEKALECLQQVLYIDKRFSKAYH---------------------LRGLLLHG-----LGQ 600
+ ++E Q + ++ +KA+ ++GL++ G LG
Sbjct: 244 NWSSIEDFDQAMRLEPVAAKAFFQQIANTLNQEPDTVEDDESKLIQGLMVRGNLRYQLGD 303
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ A+ + L +DP+ E R++ A+G+Y+ A+
Sbjct: 304 YPAALNAYNQVLELDPNYTEAYNQRSTVRSAMGDYQGAI 342
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+S E +QS+ + W +G A G+ AI L++AL+ P+ A H RG+ ++
Sbjct: 13 LSAGMEDVQSD---ADTWLSQGIASFQQGDYRHAIAALNQALQINPDLAQAYHYRGMSHY 69
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D A+ D ++LD +N AY+ GL L+++ + A + + +A+QLD N+ + +
Sbjct: 70 CQGDALGAIGDFDEVLRLDPQNAQAYSDRGLILATLNDRWGAMQDYNQALQLDSNYAKGY 129
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + L + + A+ QV+ ++ ++ Y RG+ + ++ AI D L I
Sbjct: 130 LNRSMLRLALEDYDGAIADCDQVIRMNPNLAEGYLNRGIARFEVEAYQDAIGDCDRALAI 189
Query: 615 DPSNIECLYLRASCYH-AIGEYREAV 639
+ SN+ Y H A+G Y+EA+
Sbjct: 190 N-SNLAAAYFNRGMNHIALGAYQEAI 214
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 105/267 (39%), Gaps = 41/267 (15%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RGIA+ Y AI D+ L + A RG + AI+DF ++
Sbjct: 164 LNRGIARFEVEAYQDAIGDCDRALAINSNLAAAYFNRGMNHIALGAYQEAIADFNHVLEL 223
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE---------------- 488
NP+ +A+ RG R LGE+ +I+D +A+ EP +A +
Sbjct: 224 NPNDAQAYLNRGYVRLQLGENWSSIEDFDQAMRLEPVAAKAFFQQIANTLNQEPDTVEDD 283
Query: 489 ----------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA-- 536
RG + ++ D+ AA+ + ++LD AY S++G+Y+ A
Sbjct: 284 ESKLIQGLMVRGNLRYQLGDYPAALNAYNQVLELDPNYTEAYNQRSTVRSAMGDYQGAIA 343
Query: 537 EEAHLKAIQL-------------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
+ +K + L D+ + + + + + A+E VL ++
Sbjct: 344 DLDMVKTLSLATPLSPEPVSVATDKPTPQEYHKIGVHKLNQGDFHGAIEAFNYVLQENQN 403
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ A RG LG +AI D +
Sbjct: 404 NATALTCRGFAYRRLGDKPRAIADFQT 430
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF------ 438
+ RG + G Y +A++ ++Q+L+ DP Y EA R T R+ + + AI+D
Sbjct: 292 MVRGNLRYQLGDYPAALNAYNQVLELDPNYTEAYNQRSTVRSAMGDYQGAIADLDMVKTL 351
Query: 439 ---------TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
++ ++ + + + G + G+ AI+ + L+ N+A L R
Sbjct: 352 SLATPLSPEPVSVATDKPTPQEYHKIGVHKLNQGDFHGAIEAFNYVLQENQNNATALTCR 411
Query: 490 GIVNFKFKDFNAAVEDLSACVKL 512
G + D A+ D K+
Sbjct: 412 GFAYRRLGDKPRAIADFQTAAKV 434
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEI-QD 71
LN + + ++ +++DS A R L +L ++ AI D ++ + + +
Sbjct: 105 LNDRWGAMQDYNQALQLDSNYAKGYLNRSMLR--LALEDYDGAIADCDQVIRMNPNLAEG 162
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NR ++E ++ I DCD+AL ++ L AY +G ALG +EA++
Sbjct: 163 YLNRGIARFEVEAYQDAIGDCDRALAINSNLAAAYFNRGMNHIALGAYQEAIA 215
>gi|359460872|ref|ZP_09249435.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris sp. CCMEE 5410]
Length = 810
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI+ FD +L++ P A RG R E +AAISD+ EA+ +P E +
Sbjct: 389 GKYPDAITQFDTLLEQQPKTAAAFRERGAIRFAIGEYQAAISDYNEALTLDPKDAETYNH 448
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A+ LG+ +AI D KA+ +PN A G V F AAV++L ++ +
Sbjct: 449 RGDAQVELGKYEKAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAES 508
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ SA+ G S++G+ AE+ +A++L + + L + A+
Sbjct: 509 NHLSAHVNRGSYRSALGDSDGAEQDWERALELPVRTAKEYTSRGYAKSRLDRKQDAIADY 568
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
Q L I+ + ++A+ G + + G+ ++A K L +P++ LR
Sbjct: 569 NQALTINPQLTRAHTNLGGVFYEQGEIEQARKSFDQALQSNPNSTSAYLLRG 620
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 106/244 (43%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + SA F+Q L+ Y EA + G A + AI+ F ++ P A++
Sbjct: 355 GNWQSATENFEQALELKADYTEAALKLGETYAEIGKYPDAITQFDTLLEQQPKTAAAFRE 414
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG R A+GE AI D ++AL +P A+ + RG + + A+ D ++L
Sbjct: 415 RGAIRFAIGEYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEKAIADYRKAIRLQP 474
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y LG G+ + A + KAIQ + N L A + + L +S+ A +
Sbjct: 475 NQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRGSYRSALGDSDGAEQDW 534
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ L + R +K Y RG L + + AI D + L I+P ++ GE
Sbjct: 535 ERALELPVRTAKEYTSRGYAKSRLDRKQDAIADYNQALTINPQLTRAHTNLGGVFYEQGE 594
Query: 635 YREA 638
+A
Sbjct: 595 IEQA 598
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 133/306 (43%), Gaps = 38/306 (12%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T + + + FR RG + G+Y +AIS +++ L DP E RG A+ +
Sbjct: 400 TLLEQQPKTAAAFR-ERGAIRFAIGEYQAAISDYNEALTLDPKDAETYNHRGDAQVELGK 458
Query: 431 LEAAISDFTEAIQSNPSAGEAW----------------------------------KRRG 456
E AI+D+ +AI+ P+ + + RG
Sbjct: 459 YEKAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRG 518
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
R+ALG+S A QD +ALE +A RG + A+ D + + ++ +
Sbjct: 519 SYRSALGDSDGAEQDWERALELPVRTAKEYTSRGYAKSRLDRKQDAIADYNQALTINPQL 578
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALEC 573
A+T LG GE ++A ++ +A+Q + N A+ G L + A+ E AL+
Sbjct: 579 TRAHTNLGGVFYEQGEIEQARKSFDQALQSNPNSTSAYLLRGELRAYQGQQADFEGALQD 638
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + I+ + + R L L + ++A+ D + GL I+PS+ +R + Y +
Sbjct: 639 YDRAIAINPKDPFVLNNRCGALFSLNELQRALADCNKGLEINPSSAALYTVRGNIYLRLK 698
Query: 634 EYREAV 639
+Y +A+
Sbjct: 699 QYEKAI 704
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 31/257 (12%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A+ + AI+ ++Q L +P A G Q E+E A F +A+QSN
Sbjct: 550 SRGYAKSRLDRKQDAIADYNQALTINPQLTRAHTNLGGVFYEQGEIEQARKSFDQALQSN 609
Query: 446 PSAGEAWKRRGQARAALGESVE---AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
P++ A+ RG+ RA G+ + A+QD +A+ P +L+ R F + A
Sbjct: 610 PNSTSAYLLRGELRAYQGQQADFEGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRA 669
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + ++++ + + YT G + +Y+KA + + + IQ+
Sbjct: 670 LADCNKGLEINPSSAALYTVRGNIYLRLKQYEKAIQDYGRTIQI---------------- 713
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
N + E Q Y R S L+ L A+KDL+ L I P E
Sbjct: 714 ---NDTRKSEVRSQAAY-SNRASARIQLKDL--------DGALKDLNDALRIKPDAAEDY 761
Query: 623 YLRASCYHAIGEYREAV 639
Y R Y + ++A+
Sbjct: 762 YKRGLLYSVQNKRQDAI 778
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 102/241 (42%), Gaps = 36/241 (14%)
Query: 376 SKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++++++ +L+R G +G+ A FDQ L+ +P A + RG RA+Q +
Sbjct: 569 NQALTINPQLTRAHTNLGGVFYEQGEIEQARKSFDQALQSNPNSTSAYLLRGELRAYQGQ 628
Query: 431 ---LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E A+ D+ AI NP R A +L E A+ D +K LE P+SA +
Sbjct: 629 QADFEGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRALADCNKGLEINPSSAALYT 688
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG + + K + A++D ++++ KS + S Y A ++ LD
Sbjct: 689 VRGNIYLRLKQYEKAIQDYGRTIQINDTRKS-------EVRSQAAYSNRASARIQLKDLD 741
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
AL+ L L I ++ Y+ RGLL + + AI D
Sbjct: 742 ---------------------GALKDLNDALRIKPDAAEDYYKRGLLYSVQNKRQDAITD 780
Query: 608 L 608
L
Sbjct: 781 L 781
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%)
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
+ G + G ++ A E +A++L ++ EA L + Y ++ A+ +L
Sbjct: 346 FWGQQAAQSGNWQSATENFEQALELKADYTEAALKLGETYAEIGKYPDAITQFDTLLEQQ 405
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + A+ RG + +G+++ AI D + L +DP + E R +G+Y +A+
Sbjct: 406 PKTAAAFRERGAIRFAIGEYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEKAI 463
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
Q + + A+ +D+ + +P P L R A EL+ A++D + ++ NPS+
Sbjct: 626 QGQQADFEGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRALADCNKGLEINPSSAA 685
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEF------EPNSADILHERGIVNFKFKDFNAAVE 504
+ RG L + +AIQD + ++ E S R + KD + A++
Sbjct: 686 LYTVRGNIYLRLKQYEKAIQDYGRTIQINDTRKSEVRSQAAYSNRASARIQLKDLDGALK 745
Query: 505 DLSACVKLDKENKSAYTYLGLALS-------SIGEYKKAEEAHLK 542
DL+ +++ + Y GL S +I + KKA + + K
Sbjct: 746 DLNDALRIKPDAAEDYYKRGLLYSVQNKRQDAITDLKKAADLYAK 790
>gi|290988656|ref|XP_002677013.1| predicted protein [Naegleria gruberi]
gi|284090618|gb|EFC44269.1| predicted protein [Naegleria gruberi]
Length = 307
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 12/243 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + A+ F + ++ DP + A RG E E AI DF++AI +
Sbjct: 57 NRGVTYSEMSDNSKAMDDFSRAIELDPSFHAAYNNRGLLYTRMEEEELAIKDFSKAIDLD 116
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + + RG + A+GE A+ D +K +E EP S D + RG ++F ++ + A++D
Sbjct: 117 PNFSDFYYNRGNSYCAIGEYENAMSDYTKCIELEP-SFDCYYNRGNLHFGYQSIDKAIDD 175
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L + ++ + G A I Y A +AI+L+ NF + + +
Sbjct: 176 FTKSIELKSDFSMSWMHRGNAYCKISNYDLAIVDLTRAIELNPNFPGGYFNRGIAFTLTK 235
Query: 566 NSEKALECLQQVLYIDKRF-----------SKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ KAL+ +V+ I + AYHLRG + + + +KA D + +
Sbjct: 236 DYSKALDDFTRVIEIVPTLGPHMEMLLPLHASAYHLRGNVYQNMQETEKAQLDFKKAIEL 295
Query: 615 DPS 617
+P+
Sbjct: 296 NPA 298
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 8/241 (3%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ--SNPSA-GEAWKRRGQARA 460
F+++++ +P +A RG R+ + AI DFT+AI S P+ + RG +
Sbjct: 4 FNRVIENEPNLGDAYSQRGLIYQITRQGDLAIEDFTKAISLLSAPNVLSKLHYNRGVTYS 63
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ ++ +A+ D S+A+E +P+ + RG++ + ++ A++D S + LD Y
Sbjct: 64 EMSDNSKAMDDFSRAIELDPSFHAAYNNRGLLYTRMEEEELAIKDFSKAIDLDPNFSDFY 123
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQDLANSEKALECLQQVL 578
G + +IGEY+ A + K I+L+ +F + G+L YQ + +KA++ + +
Sbjct: 124 YNRGNSYCAIGEYENAMSDYTKCIELEPSFDCYYNRGNLHFGYQSI---DKAIDDFTKSI 180
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ FS ++ RG + + AI DL+ + ++P+ + R + +Y +A
Sbjct: 181 ELKSDFSMSWMHRGNAYCKISNYDLAIVDLTRAIELNPNFPGGYFNRGIAFTLTKDYSKA 240
Query: 639 V 639
+
Sbjct: 241 L 241
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 4/209 (1%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILH-ERGI 491
+ DF I++ P+ G+A+ +RG + AI+D +KA+ PN LH RG+
Sbjct: 1 MDDFNRVIENEPNLGDAYSQRGLIYQITRQGDLAIEDFTKAISLLSAPNVLSKLHYNRGV 60
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ D + A++D S ++LD +AY GL + + E + A + KAI LD NF
Sbjct: 61 TYSEMSDNSKAMDDFSRAIELDPSFHAAYNNRGLLYTRMEEEELAIKDFSKAIDLDPNFS 120
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + + Y + E A+ + + ++ F Y+ RG L G KAI D +
Sbjct: 121 DFYYNRGNSYCAIGEYENAMSDYTKCIELEPSFD-CYYNRGNLHFGYQSIDKAIDDFTKS 179
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ + R + Y I Y A++
Sbjct: 180 IELKSDFSMSWMHRGNAYCKISNYDLAIV 208
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 355 LKETSNEAKRNKKFCVTRISK--------SKSISVD-----FRLSRGIAQVNEGKYASAI 401
L + + A N+ TR+ + SK+I +D F +RG + G+Y +A+
Sbjct: 81 LDPSFHAAYNNRGLLYTRMEEEELAIKDFSKAIDLDPNFSDFYYNRGNSYCAIGEYENAM 140
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
S + + ++ +P + + RG + ++ AI DFT++I+ +W RG A
Sbjct: 141 SDYTKCIELEPSF-DCYYNRGNLHFGYQSIDKAIDDFTKSIELKSDFSMSWMHRGNAYCK 199
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE------ 515
+ AI DL++A+E PN RGI KD++ A++D + +++
Sbjct: 200 ISNYDLAIVDLTRAIELNPNFPGGYFNRGIAFTLTKDYSKALDDFTRVIEIVPTLGPHME 259
Query: 516 -----NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ SAY G ++ E +KA+ KAI+L+
Sbjct: 260 MLLPLHASAYHLRGNVYQNMQETEKAQLDFKKAIELN 296
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 14/126 (11%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +KS + DF +S RG A Y AI + ++ +P +P RG A
Sbjct: 172 AIDDFTKSIELKSDFSMSWMHRGNAYCKISNYDLAIVDLTRAIELNPNFPGGYFNRGIAF 231
Query: 426 AFQRELEAAISDFTEAIQSNPSAGE-----------AWKRRGQARAALGESVEAIQDLSK 474
++ A+ DFT I+ P+ G A+ RG + E+ +A D K
Sbjct: 232 TLTKDYSKALDDFTRVIEIVPTLGPHMEMLLPLHASAYHLRGNVYQNMQETEKAQLDFKK 291
Query: 475 ALEFEP 480
A+E P
Sbjct: 292 AIELNP 297
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++S+AI LD +Y NR Y+++E + I+D KA+ LDP Y
Sbjct: 71 AMDDFSRAIE-LDPSFHAAYN-----NRGLLYTRMEEEELAIKDFSKAIDLDPNFSDFYY 124
Query: 108 LKGCAFSALGRKEEALSVWEK 128
+G ++ A+G E A+S + K
Sbjct: 125 NRGNSYCAIGEYENAMSDYTK 145
>gi|427732169|ref|YP_007078406.1| hypothetical protein Nos7524_5084 [Nostoc sp. PCC 7524]
gi|427368088|gb|AFY50809.1| hypothetical protein Nos7524_5084 [Nostoc sp. PCC 7524]
Length = 1273
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 14/286 (4%)
Query: 362 AKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
+ N+ ++ S + ++ +G+ Q G A AI+ ++Q ++ +P E R
Sbjct: 347 GQMNQPPSMSAESSNVLVTAQAWFYQGLQQAKSGDLAGAIASYNQAIQINPNSSEYWFNR 406
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G AI+ + +A+ P +AW RG LG EAI ++A+ +
Sbjct: 407 GLTLFHLENFTEAIASYDQALHLKPDYYKAWYNRGGTLGQLGLFEEAIASFNQAIAIHAD 466
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ ++ +G K A+ + L+ + + Y G+AL+ +Y++A ++
Sbjct: 467 NPEVWSSKGWAELKLGQITEAIASYDQALLLEPADPENWYYRGIALAVNEQYQQAIASYD 526
Query: 542 KAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A+++ +F EAW +L Q+ + +A+ +KAL F A++ RG+
Sbjct: 527 RALEIQPDFHEAWIDRGVVLFNLKQWSEAIASWDKALAS-------QPDFYLAWYNRGVA 579
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L LG+ K+AI + I P Y +A + Y EA++
Sbjct: 580 LDNLGRRKEAIASYQRAIKIKPDFHLAWYNQAVALFYLERYLEAIV 625
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G A++ G+ AI+ +DQ L +P PE RG A A + + AI+ + A++
Sbjct: 473 SKGWAELKLGQITEAIASYDQALLLEPADPENWYYRGIALAVNEQYQQAIASYDRALEIQ 532
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG L + EAI KAL +P+ + RG+ A+
Sbjct: 533 PDFHEAWIDRGVVLFNLKQWSEAIASWDKALASQPDFYLAWYNRGVALDNLGRRKEAIAS 592
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+K+ + A+ +AL + Y +A ++ A+Q+ ++ EAW
Sbjct: 593 YQRAIKIKPDFHLAWYNQAVALFYLERYLEAIVSYDHALQIKLDYWEAW 641
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 15/192 (7%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ I DF + RG+ N +++ AI+ +D+ L P + A RG A
Sbjct: 521 AIASYDRALEIQPDFHEAWIDRGVVLFNLKQWSEAIASWDKALASQPDFYLAWYNRGVAL 580
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ AI+ + AI+ P AW + A L +EAI AL+ + + +
Sbjct: 581 DNLGRRKEAIASYQRAIKIKPDFHLAWYNQAVALFYLERYLEAIVSYDHALQIKLDYWEA 640
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG + N + L + ++ + + TY G I Y++ LK I+
Sbjct: 641 WIGRGTAAGQIDSDNLS---LLTTIVINNQALNQGTYTG----KIASYEEG----LKYIR 689
Query: 546 LDRNFLEAWGHL 557
D + E WG L
Sbjct: 690 PDTH-PEGWGRL 700
>gi|427721153|ref|YP_007069147.1| serine/threonine protein kinase [Calothrix sp. PCC 7507]
gi|427353589|gb|AFY36313.1| serine/threonine protein kinase [Calothrix sp. PCC 7507]
Length = 709
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 123/244 (50%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A++ +D+ ++ P Y EA GRG + + + AI+ F +A+Q + E W +
Sbjct: 379 KYKEALAAYDKAIQIQPEYLEAWSGRGFSLKNLQRYQEAIASFDKALQLKNNYPEVWLAK 438
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
GQA + L + AI+ KA++ + +S + + +G K ++ A+ V+ +
Sbjct: 439 GQALSNLNQYENAIKSYDKAIDLKQDSYEAWYNKGWALHNLKRYDEAIAAYDKAVEFKPD 498
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G AL ++ Y+ A A+ +A++ +N+ +AW +L +A+E
Sbjct: 499 YEQAWYNRGNALVNLQRYEDAFTAYNQAVRYKQNYYQAWLSRGNILVNLRRYPEAIESFN 558
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
QV+ + +A++ RG LH ++++A++ + + + ++ + Y + + + +Y
Sbjct: 559 QVIKYNTDSYQAWYSRGWSLHQSQRYEEAVQSYNKAIAVKQNDYQAWYGLGNSLYVLQKY 618
Query: 636 REAV 639
+A+
Sbjct: 619 EQAI 622
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 113/244 (46%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A++++++ + P Y + G+G + + + A++ + +AIQ P EAW R
Sbjct: 345 RYQDALAVYEKAVDIRPDYAQGWYGQGKSLYELNKYKEALAAYDKAIQIQPEYLEAWSGR 404
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + L EAI KAL+ + N ++ +G + A++ + L ++
Sbjct: 405 GFSLKNLQRYQEAIASFDKALQLKNNYPEVWLAKGQALSNLNQYENAIKSYDKAIDLKQD 464
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G AL ++ Y +A A+ KA++ ++ +AW + +L E A
Sbjct: 465 SYEAWYNKGWALHNLKRYDEAIAAYDKAVEFKPDYEQAWYNRGNALVNLQRYEDAFTAYN 524
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
Q + + + +A+ RG +L L ++ +AI+ + + + + + Y R H Y
Sbjct: 525 QAVRYKQNYYQAWLSRGNILVNLRRYPEAIESFNQVIKYNTDSYQAWYSRGWSLHQSQRY 584
Query: 636 REAV 639
EAV
Sbjct: 585 EEAV 588
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 109/234 (46%), Gaps = 4/234 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQI--LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
L++G A N +Y +AI +D+ LK+D EA +G A + + AI+ + +A+
Sbjct: 436 LAKGQALSNLNQYENAIKSYDKAIDLKQDSY--EAWYNKGWALHNLKRYDEAIAAYDKAV 493
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P +AW RG A L +A ++A+ ++ N RG + + + A
Sbjct: 494 EFKPDYEQAWYNRGNALVNLQRYEDAFTAYNQAVRYKQNYYQAWLSRGNILVNLRRYPEA 553
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+E + +K + ++ A+ G +L Y++A +++ KAI + +N +AW L
Sbjct: 554 IESFNQVIKYNTDSYQAWYSRGWSLHQSQRYEEAVQSYNKAIAVKQNDYQAWYGLGNSLY 613
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
L E+A+ + + ++++ RG L L ++ +AI + + P
Sbjct: 614 VLQKYEQAIAAYNRAVRYKVDHYESWYSRGNALVNLQRYPEAIASYAKAIKYKP 667
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 355 LKETSNEAKRNKKFCVTRISK------SKSISVDFR-------LSRGIAQVNEGKYASAI 401
LK+ S EA NK + + + + + +V+F+ +RG A VN +Y A
Sbjct: 461 LKQDSYEAWYNKGWALHNLKRYDEAIAAYDKAVEFKPDYEQAWYNRGNALVNLQRYEDAF 520
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+ ++Q ++ Y +A + RG R AI F + I+ N + +AW RG +
Sbjct: 521 TAYNQAVRYKQNYYQAWLSRGNILVNLRRYPEAIESFNQVIKYNTDSYQAWYSRGWSLHQ 580
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
EA+Q +KA+ + N + G + + + A+ + V+ ++ ++
Sbjct: 581 SQRYEEAVQSYNKAIAVKQNDYQAWYGLGNSLYVLQKYEQAIAAYNRAVRYKVDHYESWY 640
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
G AL ++ Y +A ++ KAI+ ++ +A
Sbjct: 641 SRGNALVNLQRYPEAIASYAKAIKYKPDYQQA 672
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+A L+ +G F + + A+ V + + + G +L + +YK+A A+
Sbjct: 328 NNATDLYNQGNTLFDLQRYQDALAVYEKAVDIRPDYAQGWYGQGKSLYELNKYKEALAAY 387
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAIQ+ +LEAW ++L ++A+ + L + + + + +G L L Q
Sbjct: 388 DKAIQIQPEYLEAWSGRGFSLKNLQRYQEAIASFDKALQLKNNYPEVWLAKGQALSNLNQ 447
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ AIK + + + E Y + H + Y EA+
Sbjct: 448 YENAIKSYDKAIDLKQDSYEAWYNKGWALHNLKRYDEAI 486
>gi|398019700|ref|XP_003863014.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501245|emb|CBZ36324.1| hypothetical protein, conserved [Leishmania donovani]
Length = 847
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 1/259 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF +RG Q +G YA+AI+ + + DP + ++ R + E A++D+ A
Sbjct: 512 DFFHNRGFTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAA 571
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+Q + A+ RG A A LG A+++ + AL P L+ RG+V + + ++
Sbjct: 572 LQIDSGNANAYHNRGAALAKLGRLEAAVENFNCALRLSPKLTFALNARGLVYDQLQQYDK 631
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++LD+ N G ++GE + A + +I+L + A+ + +
Sbjct: 632 ALADFTEAIRLDQRNPVWLHNRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAF 691
Query: 562 QDLANSEKALECLQQVLYIDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+ L E A+E + L +K + R L + A++D + L DP N
Sbjct: 692 RKLGRYEAAIEDYTRALREHPGVATKVLNNRAYCFARLNLFEDAVRDYTEVLATDPVNAH 751
Query: 621 CLYLRASCYHAIGEYREAV 639
LY R + G+Y AV
Sbjct: 752 ALYNRGISFEKCGKYNAAV 770
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 115/295 (38%), Gaps = 34/295 (11%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
++ + RG+ G+ +AI ++ + L+ P + +AL R + AI D+
Sbjct: 407 LNAHYFYQRGLEHRRRGELEAAIHMYTRALELSPTHFKALFNRAFCEDKLKNYTRAIEDY 466
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK--- 495
T A+ +P G + G A+Q ++A+E + D H RG K
Sbjct: 467 TAALDLDPRNPFTHYNLGISYDHKGRHARAMQAFTRAIELDDRHPDFFHNRGFTQRKQGA 526
Query: 496 ------------------FKD-------------FNAAVEDLSACVKLDKENKSAYTYLG 524
FK + AV D +A +++D N +AY G
Sbjct: 527 YAAAIADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRG 586
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
AL+ +G + A E A++L A Y L +KAL + + +D+R
Sbjct: 587 AALAKLGRLEAAVENFNCALRLSPKLTFALNARGLVYDQLQQYDKALADFTEAIRLDQRN 646
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
H RG +G+ + AI D S+ + + P + RA + +G Y A+
Sbjct: 647 PVWLHNRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAFRKLGRYEAAI 701
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG N G+ AI+ + +K P A R A AF++ EAAI D+T A++
Sbjct: 652 NRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNR--AFAFRKLGRYEAAIEDYTRALR 709
Query: 444 SNPS-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+P A + R A L +A++D ++ L +P +A L+ RGI K +NAA
Sbjct: 710 EHPGVATKVLNNRAYCFARLNLFEDAVRDYTEVLATDPVNAHALYNRGISFEKCGKYNAA 769
Query: 503 VEDLSACVKLDKENKS---AYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
V+D + ++L E S +Y G + + + +A E +A++LD
Sbjct: 770 VDDFTRAIRLAPEVPSTACSYYSRGTSRLQLHQVPQAAEDLKQALKLD 817
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE--------------DPMYPEALIGRGTARAFQR 429
RL R A V YASA + D ++E D + EAL RG RA
Sbjct: 49 RLLRAKAYVQLHDYASACADLDDWIQEIDRTAHGISAGAAADSL-TEALFYRGVCRARLS 107
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
+++ A++DFTE +Q P A R A L + AI D AL+ +
Sbjct: 108 QVKDAVADFTEVLQRKPGHRRAHYERAACHAQLDDFFNAIADYEAALQLD 157
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
NRA+C+S+L ++ + D ALQ+D AY +G A + LGR E A+
Sbjct: 550 NRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRGAALAKLGRLEAAV 599
>gi|443692422|gb|ELT94016.1| hypothetical protein CAPTEDRAFT_222812 [Capitella teleta]
Length = 1941
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 127/257 (49%), Gaps = 13/257 (5%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
VT+I+ SK++++ G+ N G ++SAI F +LK+ P AL+ RG A A +
Sbjct: 1249 VTKINPSKTVAL---FKHGLHYFNNGNWSSAIEDFTNLLKQKPNDSRALLYRGRAHANLQ 1305
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH-- 487
A +D + I +PS +A+ R L +A+QDLS +L + ++IL
Sbjct: 1306 NWNEAAADLSGTIHLDPSNAKAFYFRACLLRKLHPK-KALQDLSVSLMLDDGDSNILAFL 1364
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-LSSIGEYKKAEEAHLKAIQL 546
RGI+ + A+ D A +KLDK+ A+ LGL + + Y +A + AI+
Sbjct: 1365 HRGILYNEICKHEDAIPDFEAVLKLDKDCACAHVNLGLIFMQKMNNYHRAVKKFSAAIKS 1424
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK---- 602
D +++A+ + YQ + + + AL + + +++ Y RG L+H +G
Sbjct: 1425 DPTYVKAYICRAEAYQKVHDIKNALLDITRAIHLRPDMQHLYMYRGQLVHKIGDLDLAAF 1484
Query: 603 --KAIKDLSSGLGIDPS 617
K +L+SGLG P+
Sbjct: 1485 CVKHASELNSGLGQSPT 1501
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 4/244 (1%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI F Q +K +P EA R + E A+ DF+ + NPS A + G
Sbjct: 1208 AIVNFSQAIKINPNDDEAYYQRAQMYEQRGEQLLAMEDFSMVTKINPSKTVALFKHGLHY 1267
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G AI+D + L+ +PN + L RG + +++N A DLS + LD N A
Sbjct: 1268 FNNGNWSSAIEDFTNLLKQKPNDSRALLYRGRAHANLQNWNEAAADLSGTIHLDPSNAKA 1327
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAI--QLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
+ + L + K ++ + + D N L A+ H Y ++ E A+ + V
Sbjct: 1328 FYFRACLLRKLHPKKALQDLSVSLMLDDGDSNIL-AFLHRGILYNEICKHEDAIPDFEAV 1386
Query: 578 LYIDKRFSKAYHLRGLL-LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +DK + A+ GL+ + + + +A+K S+ + DP+ ++ RA Y + + +
Sbjct: 1387 LKLDKDCACAHVNLGLIFMQKMNNYHRAVKKFSAAIKSDPTYVKAYICRAEAYQKVHDIK 1446
Query: 637 EAVI 640
A++
Sbjct: 1447 NALL 1450
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 18/253 (7%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q+ Y +A F+ ++ +P Y E + +++ EL +
Sbjct: 1592 GMCQMETRDYLNANEAFNNAIRVNPKYAE--VPTVICKSWILELL--------------T 1635
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ +A+ RRG R L ++ +QD ++AL +P+ R K ++ A+ + +
Sbjct: 1636 SSQAYYRRGMTRMKLKQA-RGVQDFNRALALDPSLFQAYLSRAAFYGLRKQYSKAILNCN 1694
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+KL ++ AY Y G I Y A +AI +D L A+ + Y +S
Sbjct: 1695 QAIKLQPKSIRAYLYRGALKFHIKAYTLAVRDLTQAISIDTRCLLAYFNRAVCYHYSKHS 1754
Query: 568 EKALECLQQVLYI-DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
EKAL+ VL + D+ K RGLL L + A+ D + + P + + +
Sbjct: 1755 EKALKDYGIVLLLGDQLKLKVLINRGLLYSDLNDYTNALHDFLLAVQLCPEDKQIHHTLG 1814
Query: 627 SCYHAIGEYREAV 639
CYH + + +AV
Sbjct: 1815 LCYHKLDQLEDAV 1827
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 8/165 (4%)
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL--GLALSS 529
LS++L+ EP D E + N + N VE L+ + +N Y G L
Sbjct: 1080 LSESLQVEPVIDD---EEDLENIDY--LNGEVERLNTIIS-SSDNPRPYDLCRRGAILRK 1133
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+G K+A +AI+ + L+A+ H Y L + ALE L +L ++ + AY
Sbjct: 1134 LGCIKEALHDLNRAIEQESQMLDAYWHRHMIYLLLNKRQNALEDLNLILRHNRNHAAAYR 1193
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
R + + AI + S + I+P++ E Y RA Y GE
Sbjct: 1194 SRAHIFREMNDVTLAIVNFSQAIKINPNDDEAYYQRAQMYEQRGE 1238
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RRG LG EA+ DL++A+E E D R ++ A+EDL+ ++ +
Sbjct: 1126 RRGAILRKLGCIKEALHDLNRAIEQESQMLDAYWHRHMIYLLLNKRQNALEDLNLILRHN 1185
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ + +AY + + A +AI+++ N EA+ Q Y+ A+E
Sbjct: 1186 RNHAAAYRSRAHIFREMNDVTLAIVNFSQAIKINPNDDEAYYQRAQMYEQRGEQLLAMED 1245
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
V I+ + A GL G AI+D ++ L P++ L R + +
Sbjct: 1246 FSMVTKINPSKTVALFKHGLHYFNNGNWSSAIEDFTNLLKQKPNDSRALLYRGRAHANLQ 1305
Query: 634 EYREA 638
+ EA
Sbjct: 1306 NWNEA 1310
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 108/283 (38%), Gaps = 41/283 (14%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ F +K DP Y +A I R A +++ A+ D T AI P + RG
Sbjct: 1411 YHRAVKKFSAAIKSDPTYVKAYICRAEAYQKVHDIKNALLDITRAIHLRPDMQHLYMYRG 1470
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
Q +G+ A + A E ++ IV+ K+++ A+ L + K+ K
Sbjct: 1471 QLVHKIGDLDLAAFCVKHASELNSGLGQSPTQQAIVHSFLKNYDKAIGALVSATKV-KPV 1529
Query: 517 KSAYTYLG-------LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ LG L +I ++KA + ++L + W + + A
Sbjct: 1530 PPLFLLLGKTQMKAQLWEDAIVSFQKALDLVEDELRLTHYMQKPWQEKLPWPPEAAEMNF 1589
Query: 570 AL--------------ECLQQVLYIDKRF------------------SKAYHLRGLLLHG 597
L E + ++ ++ S+AY+ RG+
Sbjct: 1590 LLGMCQMETRDYLNANEAFNNAIRVNPKYAEVPTVICKSWILELLTSSQAYYRRGMTRMK 1649
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L Q + ++D + L +DPS + RA+ Y +Y +A++
Sbjct: 1650 LKQ-ARGVQDFNRALALDPSLFQAYLSRAAFYGLRKQYSKAIL 1691
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 106/251 (42%), Gaps = 14/251 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSR +Y+ AI +Q +K P A + RG + + A+ D T+AI
Sbjct: 1674 LSRAAFYGLRKQYSKAILNCNQAIKLQPKSIRAYLYRGALKFHIKAYTLAVRDLTQAISI 1733
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDFNAAV 503
+ A+ R S +A++D L + +L RG++ D+ A+
Sbjct: 1734 DTRCLLAYFNRAVCYHYSKHSEKALKDYGIVLLLGDQLKLKVLINRGLLYSDLNDYTNAL 1793
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D V+L E+K + LGL + + + A + +A++LD FLEA + D
Sbjct: 1794 HDFLLAVQLCPEDKQIHHTLGLCYHKLDQLEDAVNSFTRALELDPFFLEALICRGNVFMD 1853
Query: 564 LANS---EKALECLQQVLYIDK-----RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
++ A ++VL +D R + AY+L+ G+ ++A ++ + ++
Sbjct: 1854 FGHTFGLTFARHDYERVLRVDPVCLPARVNLAYNLQ-----VQGKFQQAWHQFNATITLN 1908
Query: 616 PSNIECLYLRA 626
P L RA
Sbjct: 1909 PRYQPALEGRA 1919
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 17/172 (9%)
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY------LGLALSS 529
L + P +A++ G+ + +D+ A E + ++++ + T L L SS
Sbjct: 1578 LPWPPEAAEMNFLLGMCQMETRDYLNANEAFNNAIRVNPKYAEVPTVICKSWILELLTSS 1637
Query: 530 IGEYKKA-EEAHLK----------AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
Y++ LK A+ LD + +A+ FY KA+ Q +
Sbjct: 1638 QAYYRRGMTRMKLKQARGVQDFNRALALDPSLFQAYLSRAAFYGLRKQYSKAILNCNQAI 1697
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
+ + +AY RG L + + A++DL+ + ID + + RA CYH
Sbjct: 1698 KLQPKSIRAYLYRGALKFHIKAYTLAVRDLTQAISIDTRCLLAYFNRAVCYH 1749
>gi|411119878|ref|ZP_11392254.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410710034|gb|EKQ67545.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 272
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q E AI+ + + + + P E W RG A LG+ EA+ + +AL+ A H
Sbjct: 20 QGVYEGAIAQYDQLLANQPDLYEVWTYRGYALEQLGQLREALANFEQALKVNSEFALAWH 79
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+GIV K D++ A+ L VKL ++ A+ G AL + +++A + + I+L
Sbjct: 80 GKGIVFAKLSDYDEALTCLDKTVKLAPKDPKAWYNRGNALIHLQRFEEALTSFNRTIELT 139
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ +AW H ++ +L AL L++ L I A+ RG +L LG ++ AI
Sbjct: 140 PDDYKAWYHRSKTLTNLGYLYAALASLEKALSIKPDCYYAWSYRGTVLKKLGSYEDAIAS 199
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I P++ + Y +A CY G ++A+
Sbjct: 200 FDHSLRIKPNHSDAWYNKARCYALQGNIKQAL 231
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 88/201 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+ A++ F+Q LK + + A G+G A + + A++ + ++ P
Sbjct: 47 RGYALEQLGQLREALANFEQALKVNSEFALAWHGKGIVFAKLSDYDEALTCLDKTVKLAP 106
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG A L EA+ ++ +E P+ + R AA+ L
Sbjct: 107 KDPKAWYNRGNALIHLQRFEEALTSFNRTIELTPDDYKAWYHRSKTLTNLGYLYAALASL 166
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + A++Y G L +G Y+ A + ++++ N +AW + + Y N
Sbjct: 167 EKALSIKPDCYYAWSYRGTVLKKLGSYEDAIASFDHSLRIKPNHSDAWYNKARCYALQGN 226
Query: 567 SEKALECLQQVLYIDKRFSKA 587
++AL L + + ++ A
Sbjct: 227 IKQALCYLHRAIKLNPTLYTA 247
>gi|284041455|ref|YP_003391385.1| hypothetical protein Slin_6629 [Spirosoma linguale DSM 74]
gi|283820748|gb|ADB42586.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74]
Length = 458
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 15/277 (5%)
Query: 365 NKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQILKED 411
N+ C +I+ + + DF ++RG ++ Y A++ ++ L++
Sbjct: 137 NRGLCRLQINYTTTALADFTKAVTLAPNDVTMLIARGNCKMQLNDYKGALADYNLSLEKS 196
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P P AL GRG AR + + AI DF A++ + E + RRG ++ LGE A+ D
Sbjct: 197 PNKPLALAGRGYARFKLEDYKNAILDFNRAVELSKDDPELYYRRGLVKSRLGEFENALTD 256
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG--LALSS 529
K ++ P+ L RG + + AV D+ +++ N + Y + S+
Sbjct: 257 FDKTVQLNPSHFRALFSRGFCKSRLGNVKQAVADIDKSIEMGTANTTNKAYYSDFITAST 316
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+ + + KA +L + +A+ +S+ AL+ L + + + ++ Y
Sbjct: 317 LQLFGSVVQDRYKATELTDDRADAYLVRGIIRNSGGDSKLALQDLNRAVELSPTNAETYF 376
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+RG++ LG K A+ D +S + ++P + E YLR
Sbjct: 377 IRGVVRSSLGDQKGALIDCNSSIKLNPRHAEAYYLRG 413
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 127/292 (43%), Gaps = 36/292 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RGI + + + A+ F++ ++ P RG R A++DFT+A+
Sbjct: 102 LYRGINRTRQEDFRGAMQDFNRAIELSPNDALFYYNRGLCRLQINYTTTALADFTKAVTL 161
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ RG + L + A+ D + +LE PN L RG FK +D+ A+
Sbjct: 162 APNDVTMLIARGNCKMQLNDYKGALADYNLSLEKSPNKPLALAGRGYARFKLEDYKNAIL 221
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
D + V+L K++ Y GL S +GE++ A K +QL+ + A L
Sbjct: 222 DFNRAVELSKDDPELYYRRGLVKSRLGEFENALTDFDKTVQLNPSHFRALFSRGFCKSRL 281
Query: 558 TQFYQDLANSEKALE-----CLQQVLY---------------IDKRF---------SKAY 588
Q +A+ +K++E + Y + R+ + AY
Sbjct: 282 GNVKQAVADIDKSIEMGTANTTNKAYYSDFITASTLQLFGSVVQDRYKATELTDDRADAY 341
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+RG++ + G K A++DL+ + + P+N E ++R ++G+ + A+I
Sbjct: 342 LVRGIIRNSGGDSKLALQDLNRAVELSPTNAETYFIRGVVRSSLGDQKGALI 393
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 106/255 (41%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ GI + Y A+ F + ++P + R + +++ A D AI+
Sbjct: 34 FNEGIQKSAAKDYPGALQAFTMSIIQNPENGPSYYNRALTKISLNDIQGANLDLDLAIEF 93
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A+ RG R + A+QD ++A+E PN A + RG+ + A+
Sbjct: 94 TPGDANAYLYRGINRTRQEDFRGAMQDFNRAIELSPNDALFYYNRGLCRLQINYTTTALA 153
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + V L + + G + +YK A + +++ N A L
Sbjct: 154 DFTKAVTLAPNDVTMLIARGNCKMQLNDYKGALADYNLSLEKSPNKPLALAGRGYARFKL 213
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ + A+ + + + K + Y+ RGL+ LG+ + A+ D + ++PS+ L+
Sbjct: 214 EDYKNAILDFNRAVELSKDDPELYYRRGLVKSRLGEFENALTDFDKTVQLNPSHFRALFS 273
Query: 625 RASCYHAIGEYREAV 639
R C +G ++AV
Sbjct: 274 RGFCKSRLGNVKQAV 288
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 366 KKFCVTRISKSKSI--SVDFRLSRGIAQVNEGKY------ASAISIFDQILKEDPMYPE- 416
+ FC +R+ K +D + G A Y AS + +F ++++ E
Sbjct: 274 RGFCKSRLGNVKQAVADIDKSIEMGTANTTNKAYYSDFITASTLQLFGSVVQDRYKATEL 333
Query: 417 ------ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
A + RG R + + A+ D A++ +P+ E + RG R++LG+ A+
Sbjct: 334 TDDRADAYLVRGIIRNSGGDSKLALQDLNRAVELSPTNAETYFIRGVVRSSLGDQKGALI 393
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
D + +++ P A+ + RGI+ F D AA DLS
Sbjct: 394 DCNSSIKLNPRHAEAYYLRGIIRFDSGDEAAACIDLS 430
>gi|298244298|ref|ZP_06968104.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
44963]
gi|297551779|gb|EFH85644.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
44963]
Length = 517
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 131/267 (49%), Gaps = 21/267 (7%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + A+ +D+ ++ DP A RG A +++ A S++++AI+ +PS + +
Sbjct: 44 GDFQQALVNYDKAIELDPSLAMAYHLRGKIYAKRKDFLQAFSNYSQAIKLDPSCADFYYY 103
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A A +G +A+++ +KA+E +P+ A RGI F+ + A+ + + ++LD
Sbjct: 104 QGNAYALIGYPRQAVRNYNKAIELDPSDAIYYCNRGIAYFELNELKQALTNCNKAIELDP 163
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR----------------NFLE-----A 553
AY G + +G+ ++ + +AI+LD +F+E
Sbjct: 164 SLAMAYHLRGKIYTKLGDSQQGLLNYNQAIKLDPSLEKTSSKPAETEGSDSFVEDSFSIN 223
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ ++ Y + + +KAL ++ + +D S AY+ GL LG + AI + +
Sbjct: 224 YVNIGIDYAEAGDIQKALSNFKKAIELDPSDSIAYYNCGLAYEKLGDLQLAIVNYGRSIE 283
Query: 614 IDPSNIECLYLRASCYHAIGEYREAVI 640
++PS +Y A Y IG+Y++A+I
Sbjct: 284 LNPSYFWAIYKLADAYQEIGDYQQALI 310
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AI + +AI+ +P+ A+ R + LG+ +A+ + KA+E +P+ A H RG
Sbjct: 12 FEQAILYYDKAIELDPAHIFAYFNRALSYDLLGDFQQALVNYDKAIELDPSLAMAYHLRG 71
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR-- 548
+ K KDF A + S +KLD Y Y G A + IG ++A + KAI+LD
Sbjct: 72 KIYAKRKDFLQAFSNYSQAIKLDPSCADFYYYQGNAYALIGYPRQAVRNYNKAIELDPSD 131
Query: 549 -----NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
N A+ L + Q L N KA+E +D + AYHLRG + LG ++
Sbjct: 132 AIYYCNRGIAYFELNELKQALTNCNKAIE-------LDPSLAMAYHLRGKIYTKLGDSQQ 184
Query: 604 AIKDLSSGLGIDPS 617
+ + + + +DPS
Sbjct: 185 GLLNYNQAIKLDPS 198
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 127/262 (48%), Gaps = 1/262 (0%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S S+++ ++ GI G A+S F + ++ DP A G A +L+ AI +
Sbjct: 219 SFSINY-VNIGIDYAEAGDIQKALSNFKKAIELDPSDSIAYYNCGLAYEKLGDLQLAIVN 277
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +I+ NPS A + A +G+ +A+ ++A+ +P A+I + RG+ K
Sbjct: 278 YGRSIELNPSYFWAIYKLADAYQEIGDYQQALISYNQAINLKPLKAEIYNNRGVAYEKLG 337
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+ A+ + ++L+ A L +A IG++++A ++ +AI+L+ + + +
Sbjct: 338 DWQLAIVNYRQSIELNPSYFRAIYNLAVAYQEIGDFEQALISYNQAIKLEPLKADIYNNR 397
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
Y L +A+ Q + ++ Y RG LG ++AI+D S + +DPS
Sbjct: 398 GNVYHKLGIVYQAIVDYSQSIKLNPSHPITYFNRGGSHAKLGNIEQAIEDYSRAIELDPS 457
Query: 618 NIECLYLRASCYHAIGEYREAV 639
+ RA Y AIGE ++A+
Sbjct: 458 FANAYFSRAQIYDAIGELQQAI 479
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 142/305 (46%), Gaps = 27/305 (8%)
Query: 362 AKRNKKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
AKR K F + S++I +D F +G A G A+ +++ ++ DP
Sbjct: 75 AKR-KDFLQAFSNYSQAIKLDPSCADFYYYQGNAYALIGYPRQAVRNYNKAIELDPSDAI 133
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
RG A EL+ A+++ +AI+ +PS A+ RG+ LG+S + + + ++A+
Sbjct: 134 YYCNRGIAYFELNELKQALTNCNKAIELDPSLAMAYHLRGKIYTKLGDSQQGLLNYNQAI 193
Query: 477 EFEPN-------------SADILHERGIVNF--------KFKDFNAAVEDLSACVKLDKE 515
+ +P+ S + + +N+ + D A+ + ++LD
Sbjct: 194 KLDPSLEKTSSKPAETEGSDSFVEDSFSINYVNIGIDYAEAGDIQKALSNFKKAIELDPS 253
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ AY GLA +G+ + A + ++I+L+ ++ A L YQ++ + ++AL
Sbjct: 254 DSIAYYNCGLAYEKLGDLQLAIVNYGRSIELNPSYFWAIYKLADAYQEIGDYQQALISYN 313
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
Q + + ++ Y+ RG+ LG + AI + + ++PS +Y A Y IG++
Sbjct: 314 QAINLKPLKAEIYNNRGVAYEKLGDWQLAIVNYRQSIELNPSYFRAIYNLAVAYQEIGDF 373
Query: 636 REAVI 640
+A+I
Sbjct: 374 EQALI 378
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 107/502 (21%), Positives = 202/502 (40%), Gaps = 51/502 (10%)
Query: 86 KHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE------HALHQSAD 139
+ I DKA++LDP + AY + ++ LG ++AL ++K E A H
Sbjct: 13 EQAILYYDKAIELDPAHIFAYFNRALSYDLLGDFQQALVNYDKAIELDPSLAMAYHLRGK 72
Query: 140 L----KQFLE-LEELLTAAKQDRSVT-CEYDVSNSMSSLTVSESGLNANDKMSETSENHN 193
+ K FL+ A K D S Y N+ + + + +K E + +
Sbjct: 73 IYAKRKDFLQAFSNYSQAIKLDPSCADFYYYQGNAYALIGYPRQAVRNYNKAIELDPS-D 131
Query: 194 KSDICDSSSQSRDVSE------TCSKSSH-DPDLCNGRSDEAKGGSSVPVSKSGL-HING 245
C+ +++E C+K+ DP L K + + S+ GL + N
Sbjct: 132 AIYYCNRGIAYFELNELKQALTNCNKAIELDPSLAMAYHLRGKIYTKLGDSQQGLLNYNQ 191
Query: 246 KLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTH 305
++ + S + + S A + S+ + S + N ID A
Sbjct: 192 AIK-----LDPSLEKTSSKPAETEGSDSFVEDSFSINYVNIGIDYAEAG----------- 235
Query: 306 DVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSD-----STESRS---KLSFKWDMLKE 357
D+ LS+ ++ ++S +Y ++ K D RS S+ W + K
Sbjct: 236 DIQKALSNFKKAIELDPSDSIAYYNCGLAYEKLGDLQLAIVNYGRSIELNPSYFWAIYK- 294
Query: 358 TSNEAKRNKKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDP 412
++ + + IS +++I++ + +RG+A G + AI + Q ++ +P
Sbjct: 295 LADAYQEIGDYQQALISYNQAINLKPLKAEIYNNRGVAYEKLGDWQLAIVNYRQSIELNP 354
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
Y A+ A + E A+ + +AI+ P + + RG LG +AI D
Sbjct: 355 SYFRAIYNLAVAYQEIGDFEQALISYNQAIKLEPLKADIYNNRGNVYHKLGIVYQAIVDY 414
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
S++++ P+ RG + K + A+ED S ++LD +AY +IGE
Sbjct: 415 SQSIKLNPSHPITYFNRGGSHAKLGNIEQAIEDYSRAIELDPSFANAYFSRAQIYDAIGE 474
Query: 533 YKKAEEAHLKAIQLDRNFLEAW 554
++A + KA +L + + +
Sbjct: 475 LQQAIGDYDKAFKLKPSLVTTY 496
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 113/537 (21%), Positives = 206/537 (38%), Gaps = 92/537 (17%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQS 66
+L+ + I D+ + +D A R L +L N+ KAI LD LA +
Sbjct: 8 KLSNFEQAILYYDKAIELDPAHIFAYFNRALSYDLLGDFQQALVNYDKAIE-LDPSLAMA 66
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y + R Y++ + + +A++LDP+ Y +G A++ +G +A+ +
Sbjct: 67 YHL-----RGKIYAKRKDFLQAFSNYSQAIKLDPSCADFYYYQGNAYALIGYPRQAVRNY 121
Query: 127 EKGYE----HALHQSADLKQFLELEEL---LT----AAKQDRSVTCEYDVSNSM-SSLTV 174
K E A++ + EL EL LT A + D S+ Y + + + L
Sbjct: 122 NKAIELDPSDAIYYCNRGIAYFELNELKQALTNCNKAIELDPSLAMAYHLRGKIYTKLGD 181
Query: 175 SESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSV 234
S+ GL N+N++ D S K+S P G + S+
Sbjct: 182 SQQGL----------LNYNQAIKLDPS---------LEKTSSKPAETEGSDSFVEDSFSI 222
Query: 235 PVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICN------GPI 288
G+ ++ + D K+ + A E++ S + C G +
Sbjct: 223 NYVNIGI-----------DYAEAGDIQKALSNFKKAIELDPSDSIAYYNCGLAYEKLGDL 271
Query: 289 DKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKL 348
A VN +GR +++ L D+ Y ++ IS N++ +
Sbjct: 272 QLAIVN--YGRSI----ELNPSYFWAIYKLADAYQEIGDYQQALISYNQAIN-------- 317
Query: 349 SFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS-------------RGIAQVNEG 395
LK E N+ ++ + V++R S +A G
Sbjct: 318 ------LKPLKAEIYNNRGVAYEKLGDWQLAIVNYRQSIELNPSYFRAIYNLAVAYQEIG 371
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+ A+ ++Q +K +P+ + RG + AI D++++I+ NPS + R
Sbjct: 372 DFEQALISYNQAIKLEPLKADIYNNRGNVYHKLGIVYQAIVDYSQSIKLNPSHPITYFNR 431
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
G + A LG +AI+D S+A+E +P+ A+ R + + A+ D KL
Sbjct: 432 GGSHAKLGNIEQAIEDYSRAIELDPSFANAYFSRAQIYDAIGELQQAIGDYDKAFKL 488
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 132/324 (40%), Gaps = 60/324 (18%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D + +RGIA + A++ ++ ++ DP A RG +
Sbjct: 122 NKAIELDPSDAIYYCNRGIAYFELNELKQALTNCNKAIELDPSLAMAYHLRGKIYTKLGD 181
Query: 431 LEAAISDFTEAIQSNPSAGEA---------------------WKRRGQARAALGESVEAI 469
+ + ++ +AI+ +PS + + G A G+ +A+
Sbjct: 182 SQQGLLNYNQAIKLDPSLEKTSSKPAETEGSDSFVEDSFSINYVNIGIDYAEAGDIQKAL 241
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
+ KA+E +P+ + + G+ K D A+ + ++L+ A L A
Sbjct: 242 SNFKKAIELDPSDSIAYYNCGLAYEKLGDLQLAIVNYGRSIELNPSYFWAIYKLADAYQE 301
Query: 530 IGEYKKAEEAH--------LKA--------------------------IQLDRNFLEAWG 555
IG+Y++A ++ LKA I+L+ ++ A
Sbjct: 302 IGDYQQALISYNQAINLKPLKAEIYNNRGVAYEKLGDWQLAIVNYRQSIELNPSYFRAIY 361
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+L YQ++ + E+AL Q + ++ + Y+ RG + H LG +AI D S + ++
Sbjct: 362 NLAVAYQEIGDFEQALISYNQAIKLEPLKADIYNNRGNVYHKLGIVYQAIVDYSQSIKLN 421
Query: 616 PSNIECLYLRASCYHAIGEYREAV 639
PS+ + R + +G +A+
Sbjct: 422 PSHPITYFNRGGSHAKLGNIEQAI 445
>gi|300863514|ref|ZP_07108466.1| Tetratricopeptide TPR_2 (fragment) [Oscillatoria sp. PCC 6506]
gi|300338470|emb|CBN53608.1| Tetratricopeptide TPR_2 (fragment) [Oscillatoria sp. PCC 6506]
Length = 401
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 5/261 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA- 424
+ +++ ++ DF +RG+A G AI+ +D+ L+ P EA R A
Sbjct: 52 AIASWTQAVKLNPDFHEAWYNRGVAYRKLGCNQEAIADYDKSLEIKPENAEAWYNRANAL 111
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
R+ +R E AI+D+ +A+Q P EAW RG L + EAI D KAL P+ +
Sbjct: 112 RSLER-FEEAIADYDKALQIRPEYHEAWSNRGNTFVNLERNEEAIADYDKALAIRPDYYE 170
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ RG+ F A+ + +++ A+ G+AL++ GE+ +A ++ K +
Sbjct: 171 AWYNRGMALKSLGKFAEAIASYNRALEIRPNLHQAWYNRGIALANSGEFAEAIASYDKTL 230
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
L N E W + A+ + + + + +A++ RGL L L + A
Sbjct: 231 ALKPNAWEVWNKRGTALVQSGQLDVAIASWDRAVELKPDYHEAWYNRGLALASLEKFAAA 290
Query: 605 IKDLSSGLGIDPSNIECLYLR 625
I L P N E Y R
Sbjct: 291 IASWDKSLEFHPDNREAWYNR 311
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P P+A +G A + AI+ +T+A++ NP EAW RG A LG + EAI D
Sbjct: 30 PQNPQACYDQGNALVQLGRFQEAIASWTQAVKLNPDFHEAWYNRGVAYRKLGCNQEAIAD 89
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
K+LE +P +A+ + R + F A+ D +++ E A++ G ++
Sbjct: 90 YDKSLEIKPENAEAWYNRANALRSLERFEEAIADYDKALQIRPEYHEAWSNRGNTFVNLE 149
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
++A + KA+ + ++ EAW + + L +A+ + L I +A++ R
Sbjct: 150 RNEEAIADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAIASYNRALEIRPNLHQAWYNR 209
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
G+ L G+ +AI L + P+ E R +
Sbjct: 210 GIALANSGEFAEAIASYDKTLALKPNAWEVWNKRGTA 246
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 114/228 (50%), Gaps = 5/228 (2%)
Query: 363 KRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
+RN++ + K+ +I D+ +RG+A + GK+A AI+ +++ L+ P +A
Sbjct: 149 ERNEE-AIADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAIASYNRALEIRPNLHQAWY 207
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG A A E AI+ + + + P+A E W +RG A G+ AI +A+E +
Sbjct: 208 NRGIALANSGEFAEAIASYDKTLALKPNAWEVWNKRGTALVQSGQLDVAIASWDRAVELK 267
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P+ + + RG+ + F AA+ ++ +N+ A+ G+ALS + + A +
Sbjct: 268 PDYHEAWYNRGLALASLEKFAAAIASWDKSLEFHPDNREAWYNRGIALSKLERIEDAIAS 327
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID-KRFSK 586
+ K +++ + H Y N++ A+E LQ+ + ++ K++ K
Sbjct: 328 YDKVLEIKPDDAATLYHKAGLYCQQNNTDLAMENLQRAIALNPKKYRK 375
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%)
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+KA+E P + +++G + F A+ + VKL+ + A+ G+A +G
Sbjct: 23 NKAVEITPQNPQACYDQGNALVQLGRFQEAIASWTQAVKLNPDFHEAWYNRGVAYRKLGC 82
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
++A + K++++ EAW + + L E+A+ + L I + +A+ RG
Sbjct: 83 NQEAIADYDKSLEIKPENAEAWYNRANALRSLERFEEAIADYDKALQIRPEYHEAWSNRG 142
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L ++++AI D L I P E Y R ++G++ EA+
Sbjct: 143 NTFVNLERNEEAIADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAI 189
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
+L + I + D+ + + A A R L SL + +AI D L E +
Sbjct: 79 KLGCNQEAIADYDKSLEIKPENAEAWYNRAN--ALRSLERFEEAIADYDKALQIRPEYHE 136
Query: 72 IC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
NR + LE ++ I D DKAL + P +A+ +G A +LG+ EA++ + +
Sbjct: 137 AWSNRGNTFVNLERNEEAIADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAIASYNRAL 196
Query: 131 E--HALHQS 137
E LHQ+
Sbjct: 197 EIRPNLHQA 205
>gi|423066143|ref|ZP_17054933.1| protein prenyltransferase alpha subunit [Arthrospira platensis C1]
gi|406712185|gb|EKD07374.1| protein prenyltransferase alpha subunit [Arthrospira platensis C1]
Length = 843
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A+S FDQ LK P + +A RG E E AIS + +A++ EAW
Sbjct: 5 GEYEQALSSFDQALKYKPDFHDAWNNRGNVLYDLGEYEQAISSYDQALKYKQDYHEAWYN 64
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A LGE +AI +AL+++P+ + RG ++ A+ +K
Sbjct: 65 RGNALYNLGEYEQAISSFDQALKYKPDLHEAWLNRGNALSDLGEYEQAISSFDQALKYKP 124
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A++ G ALS +GEY++A ++ +A + +F AW + +DL E+A+
Sbjct: 125 DFHGAWSNRGGALSDLGEYEQAISSYDQARKYKPDFHGAWYNRGNALKDLGEYEQAISSY 184
Query: 575 QQVLYIDKRFSKAYHLRGL 593
Q L F +A+ RG+
Sbjct: 185 DQALKYKPDFHEAWANRGI 203
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 84/169 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G+Y AIS +DQ LK Y EA RG A E E AIS F +A++
Sbjct: 30 NRGNVLYDLGEYEQAISSYDQALKYKQDYHEAWYNRGNALYNLGEYEQAISSFDQALKYK 89
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A + LGE +AI +AL+++P+ RG ++ A+
Sbjct: 90 PDLHEAWLNRGNALSDLGEYEQAISSFDQALKYKPDFHGAWSNRGGALSDLGEYEQAISS 149
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K + A+ G AL +GEY++A ++ +A++ +F EAW
Sbjct: 150 YDQARKYKPDFHGAWYNRGNALKDLGEYEQAISSYDQALKYKPDFHEAW 198
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%)
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LGE +A+ +AL+++P+ D + RG V + ++ A+ +K ++ A+
Sbjct: 4 LGEYEQALSSFDQALKYKPDFHDAWNNRGNVLYDLGEYEQAISSYDQALKYKQDYHEAWY 63
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G AL ++GEY++A + +A++ + EAW + DL E+A+ Q L
Sbjct: 64 NRGNALYNLGEYEQAISSFDQALKYKPDLHEAWLNRGNALSDLGEYEQAISSFDQALKYK 123
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
F A+ RG L LG++++AI P Y R + +GEY +A+
Sbjct: 124 PDFHGAWSNRGGALSDLGEYEQAISSYDQARKYKPDFHGAWYNRGNALKDLGEYEQAI 181
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 57/107 (53%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG A + G+Y AIS FDQ LK P + A RG A + E E AIS + +A +
Sbjct: 97 LNRGNALSDLGEYEQAISSFDQALKYKPDFHGAWSNRGGALSDLGEYEQAISSYDQARKY 156
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
P AW RG A LGE +AI +AL+++P+ + RGI
Sbjct: 157 KPDFHGAWYNRGNALKDLGEYEQAISSYDQALKYKPDFHEAWANRGI 203
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%)
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+ +GEY++A + +A++ +F +AW + DL E+A+ Q L + + +
Sbjct: 1 MKDLGEYEQALSSFDQALKYKPDFHDAWNNRGNVLYDLGEYEQAISSYDQALKYKQDYHE 60
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A++ RG L+ LG++++AI L P E R + +GEY +A+
Sbjct: 61 AWYNRGNALYNLGEYEQAISSFDQALKYKPDLHEAWLNRGNALSDLGEYEQAI 113
>gi|390441071|ref|ZP_10229255.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis sp. T1-4]
gi|389835636|emb|CCI33381.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis sp. T1-4]
Length = 248
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E AI+ + A++ P EAW RG A LG EA+ +ALE +P+ + + RG
Sbjct: 1 MEEAIASYDRALEFKPDVHEAWYNRGVALGNLGRLEEALASFDRALEIKPDDPEAWYNRG 60
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ F A+ +++ ++ A+ G+AL+ +G + +A + KA+++ +
Sbjct: 61 VALADLGRFAEALASFDKALEIKPDDHQAWYNRGVALADLGRFAEALASFDKALEIKPDD 120
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+AW + DL E+A+ + L I A+ RG +L +G++K A++
Sbjct: 121 HQAWYNRGSALDDLGRFEEAIASYDRALEIKPDDPYAWDNRGYVLTCMGRYKDALESCDR 180
Query: 611 GLGIDPSNIECLYLRASCY 629
+ I+P++ Y +A CY
Sbjct: 181 AIKINPNDANPYYNKAVCY 199
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G+ A++ FD+ L+ P PEA RG A A A++ F +A++
Sbjct: 24 NRGVALGNLGRLEEALASFDRALEIKPDDPEAWYNRGVALADLGRFAEALASFDKALEIK 83
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A A LG EA+ KALE +P+ + RG F A+
Sbjct: 84 PDDHQAWYNRGVALADLGRFAEALASFDKALEIKPDDHQAWYNRGSALDDLGRFEEAIAS 143
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ ++ A+ G L+ +G YK A E+ +AI+++ N + + Y
Sbjct: 144 YDRALEIKPDDPYAWDNRGYVLTCMGRYKDALESCDRAIKINPNDANPYYNKAVCYGLQN 203
Query: 566 NSEKALECLQQVLYIDKRF 584
N E A+E LQ+ + +D +
Sbjct: 204 NVELAIENLQRAINLDVEY 222
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI +ALEF+P+ + + RG+ A+ +++ ++ A+ G+A
Sbjct: 3 EAIASYDRALEFKPDVHEAWYNRGVALGNLGRLEEALASFDRALEIKPDDPEAWYNRGVA 62
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
L+ +G + +A + KA+++ + +AW + DL +AL + L I +
Sbjct: 63 LADLGRFAEALASFDKALEIKPDDHQAWYNRGVALADLGRFAEALASFDKALEIKPDDHQ 122
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A++ RG L LG+ ++AI L I P + R +G Y++A+
Sbjct: 123 AWYNRGSALDDLGRFEEAIASYDRALEIKPDDPYAWDNRGYVLTCMGRYKDAL 175
>gi|298247115|ref|ZP_06970920.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
gi|297549774|gb|EFH83640.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
Length = 770
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 121/254 (47%), Gaps = 2/254 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G A++ + ++ +DP Y E + RG E A++D+ ++ +
Sbjct: 506 NRGQVYAGIGALEEALADYTAVITQDPYYSEYYLERGNLYRRLGRNEEALADYERSVFYS 565
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA R + G EA+ D S LE +P D L R + ++ ++ A+++D
Sbjct: 566 PPYAEAHFNRANVHSLFGHDEEALADYSYVLEIDPTYLDALINRASIFYEQGNYTASLQD 625
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++ D EN + LGL L + + +KA++A A+Q D + AW + +
Sbjct: 626 VERGLQQDPENAQLHCTLGLLLMAQEDTEKADQAFSAALQQDPLLVAAWTNRAILAFEEN 685
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE-CLYL 624
E A++ L Q L +++ + Y+ RG+ + ++AI D + L + + + LY
Sbjct: 686 RIEAAIKDLSQALALEENPTVLYN-RGIAYQAQNRWQEAINDFTQALALSNEDAQDILYR 744
Query: 625 RASCYHAIGEYREA 638
R+ CY +G+ +A
Sbjct: 745 RSFCYTQLGDTNQA 758
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D ++R +G Y +++ ++ L++DP + G Q + E A F+
Sbjct: 603 LDALINRASIFYEQGNYTASLQDVERGLQQDPENAQLHCTLGLLLMAQEDTEKADQAFSA 662
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+Q +P AW R AI+DLS+AL E N +L+ RGI +
Sbjct: 663 ALQQDPLLVAAWTNRAILAFEENRIEAAIKDLSQALALEENPT-VLYNRGIAYQAQNRWQ 721
Query: 501 AAVEDLSACVKLDKENKSAYTY 522
A+ D + + L E+ Y
Sbjct: 722 EAINDFTQALALSNEDAQDILY 743
>gi|428306730|ref|YP_007143555.1| serine/threonine protein kinase [Crinalium epipsammum PCC 9333]
gi|428248265|gb|AFZ14045.1| serine/threonine protein kinase with TPR repeats [Crinalium
epipsammum PCC 9333]
Length = 705
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 119/283 (42%), Gaps = 34/283 (12%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR-AFQRELEA-- 433
K +V+ + RG A N KY AI F++ ++ YPEA GRG A QR EA
Sbjct: 395 KQNAVEAWVGRGDALNNLKKYPDAIDAFEKAIQLQINYPEAWKGRGEALIGLQRYQEAIT 454
Query: 434 -------------------------------AISDFTEAIQSNPSAGEAWKRRGQARAAL 462
AIS + +A+ P AW RG + L
Sbjct: 455 SYDKALQFQPDDYVSWNSRGWALHNLQRYDEAISSYEQAVSYKPDYSVAWYNRGNSLVNL 514
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
++ EAI+ +A++F+P++ + R + ++ AVE VKL + N +
Sbjct: 515 NKNKEAIESYDQAVKFQPSNYQAWYSRANILVNLGKYSEAVESYDQAVKLQQSNYQTWYS 574
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
G AL + Y+ A ++ KAI+L RN + W + L E A+ Q +
Sbjct: 575 RGWALHQLQRYESAIASYSKAIELKRNNYQTWYNRGNSLYQLQRYEDAIASYAQAVRYKP 634
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ +A++ RG L L +++ AI + P+ +E + R
Sbjct: 635 DYYEAWYSRGNALLNLKRYESAIASYDQAIRYKPNYLEAVTAR 677
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 120/255 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G + +Y A ++Q ++ EA +GRG A ++ AI F +AIQ
Sbjct: 369 LAKGKMLLALKRYEDAQQAYEQAIQIKQNAVEAWVGRGDALNNLKKYPDAIDAFEKAIQL 428
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ EAWK RG+A L EAI KAL+F+P+ + RG + ++ A+
Sbjct: 429 QINYPEAWKGRGEALIGLQRYQEAITSYDKALQFQPDDYVSWNSRGWALHNLQRYDEAIS 488
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
V + A+ G +L ++ + K+A E++ +A++ + +AW +L
Sbjct: 489 SYEQAVSYKPDYSVAWYNRGNSLVNLNKNKEAIESYDQAVKFQPSNYQAWYSRANILVNL 548
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+A+E Q + + + + ++ RG LH L +++ AI S + + +N + Y
Sbjct: 549 GKYSEAVESYDQAVKLQQSNYQTWYSRGWALHQLQRYESAIASYSKAIELKRNNYQTWYN 608
Query: 625 RASCYHAIGEYREAV 639
R + + + Y +A+
Sbjct: 609 RGNSLYQLQRYEDAI 623
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A KY A+ ++ + + P Y EA + +G + E A + +AIQ
Sbjct: 337 RGNALAELNKYEDALKVYQKAINLKPEYLEAWLAKGKMLLALKRYEDAQQAYEQAIQIKQ 396
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A EAW RG A L + +AI KA++ + N + RG + + A+
Sbjct: 397 NAVEAWVGRGDALNNLKKYPDAIDAFEKAIQLQINYPEAWKGRGEALIGLQRYQEAITSY 456
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ ++ ++ G AL ++ Y +A ++ +A+ ++ AW + +L
Sbjct: 457 DKALQFQPDDYVSWNSRGWALHNLQRYDEAISSYEQAVSYKPDYSVAWYNRGNSLVNLNK 516
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+++A+E Q + +A++ R +L LG++ +A++ + + SN + Y R
Sbjct: 517 NKEAIESYDQAVKFQPSNYQAWYSRANILVNLGKYSEAVESYDQAVKLQQSNYQTWYSRG 576
Query: 627 SCYHAIGEYREAV 639
H + Y A+
Sbjct: 577 WALHQLQRYESAI 589
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG A A + E A+ + +AI P EAW +G+ AL +A Q +A++
Sbjct: 334 LYQRGNALAELNKYEDALKVYQKAINLKPEYLEAWLAKGKMLLALKRYEDAQQAYEQAIQ 393
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+ N+ + RG K + A++ ++L A+ G AL + Y++A
Sbjct: 394 IKQNAVEAWVGRGDALNNLKKYPDAIDAFEKAIQLQINYPEAWKGRGEALIGLQRYQEAI 453
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
++ KA+Q + +W +L ++A+ +Q + +S A++ RG L
Sbjct: 454 TSYDKALQFQPDDYVSWNSRGWALHNLQRYDEAISSYEQAVSYKPDYSVAWYNRGNSLVN 513
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L ++K+AI+ + PSN + Y RA+ +G+Y EAV
Sbjct: 514 LNKNKEAIESYDQAVKFQPSNYQAWYSRANILVNLGKYSEAV 555
>gi|428304585|ref|YP_007141410.1| hypothetical protein Cri9333_0985 [Crinalium epipsammum PCC 9333]
gi|428246120|gb|AFZ11900.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 287
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 102/191 (53%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG + + +AAI+ F +AI+ N +A+ R A + LG EA++D ++A+
Sbjct: 67 LYNRGVDQLENGDYKAAIALFDQAIKINSKDADAFYNRAYAYSLLGSYSEAVKDYTQAIN 126
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P+ D R + ++ +A+ D + ++++ +N AY Y G A +GE+ A
Sbjct: 127 LKPDFGDAYSNRAYAYYVAGNYQSAIADCTQAIRINPKNADAYIYKGNAYDDLGEHLAAI 186
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
E + +A+ +D +A+ + Y N KA+E Q + +D +F++AY+ RG+
Sbjct: 187 ENYNQALSIDPKNAKAYYNRALGYNRQNNHLKAIEDYTQSVRLDTKFAEAYYNRGVTSLQ 246
Query: 598 LGQHKKAIKDL 608
LG+ +AI+D+
Sbjct: 247 LGKKAEAIEDI 257
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 3/223 (1%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD +RG+ Q+ G Y +AI++FDQ +K + +A R A + A+ D+T
Sbjct: 64 AVDL-YNRGVDQLENGDYKAAIALFDQAIKINSKDADAFYNRAYAYSLLGSYSEAVKDYT 122
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI P G+A+ R A G AI D ++A+ P +AD +G +
Sbjct: 123 QAINLKPDFGDAYSNRAYAYYVAGNYQSAIADCTQAIRINPKNADAYIYKGNAYDDLGEH 182
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AA+E+ + + +D +N AY L + + KA E + ++++LD F EA+ +
Sbjct: 183 LAAIENYNQALSIDPKNAKAYYNRALGYNRQNNHLKAIEDYTQSVRLDTKFAEAYYNRGV 242
Query: 560 FYQDLANSEKALECLQQV--LYIDKRFSKAYHLRGLLLHGLGQ 600
L +A+E +++ LY+ ++ ++ Y L+ L Q
Sbjct: 243 TSLQLGKKAEAIEDIRKAADLYLSQKKTQNYQSAIALVKQLQQ 285
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+ RG+ + D+ AA+ +K++ ++ A+ A S +G Y +A + + +AI
Sbjct: 67 LYNRGVDQLENGDYKAAIALFDQAIKINSKDADAFYNRAYAYSLLGSYSEAVKDYTQAIN 126
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L +F +A+ + Y N + A+ Q + I+ + + AY +G LG+H AI
Sbjct: 127 LKPDFGDAYSNRAYAYYVAGNYQSAIADCTQAIRINPKNADAYIYKGNAYDDLGEHLAAI 186
Query: 606 KDLSSGLGIDPSNIECLYLRASCYH-------AIGEYREAV 639
++ + L IDP N + Y RA Y+ AI +Y ++V
Sbjct: 187 ENYNQALSIDPKNAKAYYNRALGYNRQNNHLKAIEDYTQSV 227
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 20 ICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD-ICNRAFC 78
I D+ ++++S A A R L L ++S+A++ + + D NRA+
Sbjct: 84 IALFDQAIKINSKDADAFYNRAYAYSL--LGSYSEAVKDYTQAINLKPDFGDAYSNRAYA 141
Query: 79 YSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
Y ++ I DC +A++++P AYI KG A+ LG A+ + +
Sbjct: 142 YYVAGNYQSAIADCTQAIRINPKNADAYIYKGNAYDDLGEHLAAIENYNQA 192
>gi|427720396|ref|YP_007068390.1| hypothetical protein Cal7507_5215 [Calothrix sp. PCC 7507]
gi|427352832|gb|AFY35556.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 280
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 10/203 (4%)
Query: 374 SKSKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
S K+IS+D + SRG+A + GK + AI+ ++Q ++ +P EA RG ARA Q
Sbjct: 81 SYDKAISLDSQYGAAYKSRGLAYFDLGKKSEAIADYNQAIRINPNDAEAYNSRGNARASQ 140
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+ D+ EAI+ P+ EA+ RG ARA+ G+ +A+ DL +A+ P A +
Sbjct: 141 NDNRGAVEDYNEAIRLAPNYAEAYNNRGNARASQGDKNKALDDLGQAIRLNPRYAIAYNN 200
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + +D A+ D + ++L+ AY G A ++ G+ + LK +Q
Sbjct: 201 RGNIRASQRDNKGAIADYNQAIRLNPNFGPAYNNRGNARAADGD----KPGALKDLQRAA 256
Query: 549 NFLEAWGHLTQFYQDLANSEKAL 571
+ + + YQ + N+ K L
Sbjct: 257 DIFQNQDN-KDLYQQVMNNIKEL 278
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 85/163 (52%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G AI+ +D+ + D Y A RG A + AI+D+ +AI+ NP+ EA+
Sbjct: 72 KGNLQGAIASYDKAISLDSQYGAAYKSRGLAYFDLGKKSEAIADYNQAIRINPNDAEAYN 131
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG ARA+ ++ A++D ++A+ PN A+ + RG D N A++DL ++L+
Sbjct: 132 SRGNARASQNDNRGAVEDYNEAIRLAPNYAEAYNNRGNARASQGDKNKALDDLGQAIRLN 191
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
AY G +S + K A + +AI+L+ NF A+ +
Sbjct: 192 PRYAIAYNNRGNIRASQRDNKGAIADYNQAIRLNPNFGPAYNN 234
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L+ AI+ + +AI + G A+K RG A LG+ EAI D ++A+ PN A+ + RG
Sbjct: 75 LQGAIASYDKAISLDSQYGAAYKSRGLAYFDLGKKSEAIADYNQAIRINPNDAEAYNSRG 134
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D AVED + ++L AY G A +S G+ KA + +AI+L+ +
Sbjct: 135 NARASQNDNRGAVEDYNEAIRLAPNYAEAYNNRGNARASQGDKNKALDDLGQAIRLNPRY 194
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A+ + +++ A+ Q + ++ F AY+ RG G A+KDL
Sbjct: 195 AIAYNNRGNIRASQRDNKGAIADYNQAIRLNPNFGPAYNNRGNARAADGDKPGALKDL 252
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 1/186 (0%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E +S N AGE + + GQ + G AI KA+ + RG+
Sbjct: 43 EIGVSPPNRRTARNSKAGEFYVQ-GQNQHLKGNLQGAIASYDKAISLDSQYGAAYKSRGL 101
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
F + A+ D + ++++ + AY G A +S + + A E + +AI+L N+
Sbjct: 102 AYFDLGKKSEAIADYNQAIRINPNDAEAYNSRGNARASQNDNRGAVEDYNEAIRLAPNYA 161
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + + KAL+ L Q + ++ R++ AY+ RG + +K AI D +
Sbjct: 162 EAYNNRGNARASQGDKNKALDDLGQAIRLNPRYAIAYNNRGNIRASQRDNKGAIADYNQA 221
Query: 612 LGIDPS 617
+ ++P+
Sbjct: 222 IRLNPN 227
>gi|406831287|ref|ZP_11090881.1| peptidase C14 caspase catalytic subunit p20 [Schlesneria paludicola
DSM 18645]
Length = 423
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 34/280 (12%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I S+ + + RG AQ G Y +AI+ F Q ++ +P +A RG A ++ + +
Sbjct: 22 IGYSQYHTAESHYKRGTAQHERGDYEAAIAEFTQAIRSEPQNAQAYCVRGIAWHYKGDED 81
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI D+TEAI+ +P +A+ R A + A+ D + L ++P + + + RG++
Sbjct: 82 LAIDDYTEAIRIDPEYAQAYVGRANAWFDKLQFNLAVADYTSTLRYDPKNLEAYYSRGVI 141
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS----------------------- 529
+ + + A+ D + V++D+ + Y+ G A
Sbjct: 142 RLEQNEMSDAIADFDSVVRIDRTHAPVYSRRGYAHGQLNALDAAFADYTEAIRRQPNDWL 201
Query: 530 -----------IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
+GE++ A + +AI+LD + + + Y L + A L + +
Sbjct: 202 SYFNRGNVRQLVGEFRVAIRDYSRAIRLDPQLVVGYNNRGCAYAALEEIDSAEIDLSEAV 261
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+D +FS Y+ R L G AI+D + L +DP N
Sbjct: 262 RVDPQFSIGYYNRANLRCLRGDFDNAIRDYTEALHLDPKN 301
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ ++ + + + AI+ FD +++ D + RG A L+AA +D+TEAI+
Sbjct: 137 SRGVIRLEQNEMSDAIADFDSVVRIDRTHAPVYSRRGYAHGQLNALDAAFADYTEAIRRQ 196
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ ++ RG R +GE AI+D S+A+ +P + RG ++ ++A D
Sbjct: 197 PNDWLSYFNRGNVRQLVGEFRVAIRDYSRAIRLDPQLVVGYNNRGCAYAALEEIDSAEID 256
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
LS V++D + Y G++ A + +A+ LD W L L
Sbjct: 257 LSEAVRVDPQFSIGYYNRANLRCLRGDFDNAIRDYTEALHLDPKNWLFWSRLAWLRATLP 316
Query: 566 NSEKALE 572
+ E
Sbjct: 317 GDDSVYE 323
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RGTA+ + + EAAI++FT+AI+S P +A+ RG A G+ AI D ++A+ +P
Sbjct: 36 RGTAQHERGDYEAAIAEFTQAIRSEPQNAQAYCVRGIAWHYKGDEDLAIDDYTEAIRIDP 95
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A R F FN AV D ++ ++ D +N AY G+ E A
Sbjct: 96 EYAQAYVGRANAWFDKLQFNLAVADYTSTLRYDPKNLEAYYSRGVIRLEQNEMSDAIADF 155
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+++DR + + L + A + + +Y RG + +G+
Sbjct: 156 DSVVRIDRTHAPVYSRRGYAHGQLNALDAAFADYTEAIRRQPNDWLSYFNRGNVRQLVGE 215
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ AI+D S + +DP + R Y A+ E
Sbjct: 216 FRVAIRDYSRAIRLDPQLVVGYNNRGCAYAALEE 249
>gi|254168890|ref|ZP_04875730.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
gi|197622154|gb|EDY34729.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
Length = 1297
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 14/267 (5%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ G+A G A+ + K DP A A Q+E + A +A+Q
Sbjct: 65 VNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAAYIIEKALQI 124
Query: 445 NPSAGEAWKRRGQARAALGESVEA--------------IQDLSKALEFEPNSADILHERG 490
+ + E W + + G+ EA I+ K LE+ P +IL ++G
Sbjct: 125 DRRSKEVWGTKAEIYQLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPKDLEILFKKG 184
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ +K + + V+ + V ++ E++ A+ YLG A ++I ++A A KAI++D N
Sbjct: 185 VQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALKKAIKIDPND 244
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
++W +L Y+ E+AL+C ++ + ID K+++L +LH L + +A+K ++
Sbjct: 245 KKSWINLGILYKKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSINR 304
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYRE 637
L +D L L+ + Y E
Sbjct: 305 ALELDKKYESALLLKRDVAKKLKVYDE 331
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 34/290 (11%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+L + I + +G++ ISI + ILK +P +L+ A +LE+A++ A
Sbjct: 384 LKLQKEIMK-KKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRAT 442
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQ----------------DLSKA----------- 475
+ PS E WK R L + E I DL++A
Sbjct: 443 EIEPSNIELWKLRKDIAKDLNKPQEIINAGTQIISMEGDFETYLDLARAYYIVSRYDDAK 502
Query: 476 ------LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
L+ + +S + + G++ +K D A ++ NK + L +
Sbjct: 503 KTLERGLKLKEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPNNKKYWKNLAWVMEK 562
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+G+Y +A E + KA++LD N + W + + E+A++ L ++ F+KA +
Sbjct: 563 LGKYNEAVEYYEKALELDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALY 622
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+G L LG + +A+K +S + ++ N E +Y RA EY A+
Sbjct: 623 EKGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAAL 672
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 387 RGIAQVNE--GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +A V E GKY A+ +++ L+ DP +G + E AI F A++
Sbjct: 554 KNLAWVMEKLGKYNEAVEYYEKALELDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALKL 613
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N +A +G + LG EA++ + ++ E +++ +++R + FK +++ AA++
Sbjct: 614 NSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAALK 673
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAE---EAHLKAIQLDRNFLEAWGHLTQFY 561
DL+ + +++ K +L L E K E E + + +++ + AW L Y
Sbjct: 674 DLNLALNYERKEK----FLVLKKDVCKELKDYECVIETSKEILTINKKNISAWRDLAVAY 729
Query: 562 QDLANSEKALECLQQVLYI 580
+ + A+ + L I
Sbjct: 730 DSMGKVDSAIATYRDALEI 748
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I N G+ + RR + + E++E I++ E E SA +L G+ K
Sbjct: 28 INKNNPEGKDYLRR--SINLINENLELIKN-----ENESFSA-LLVNTGMALQKVGAIKD 79
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E KLD N SAYT + L+ EYKKA KA+Q+DR E WG + Y
Sbjct: 80 ALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAAYIIEKALQIDRRSKEVWGTKAEIY 139
Query: 562 QDLANSEKALECLQQV--LYID--KRFSKAYHLR----------GLLLHGLGQHKKAIKD 607
Q + ++AL+ +++ +Y D K + K R G+ L+ + + + +K
Sbjct: 140 QLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPKDLEILFKKGVQLYKIQSYAECVKI 199
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + I+ + E + Y I REA+
Sbjct: 200 MKKVVSINAEHQEAWVYLGAAYANIDRMREAI 231
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 122/287 (42%), Gaps = 7/287 (2%)
Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPM 413
++K +E K K+ R K + + F+ +G+ YA + I +++ +
Sbjct: 155 LIKMYPDEIKYYDKYLEYR---PKDLEILFK--KGVQLYKIQSYAECVKIMKKVVSINAE 209
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ EA + G A A + AI+ +AI+ +P+ ++W G GE EA++
Sbjct: 210 HQEAWVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFK 269
Query: 474 KALEFEPNSADILH-ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+A++ +PN + E +++ +D + A++ ++ ++LDK+ +SA +
Sbjct: 270 EAIKIDPNDKKSWYLEASVLHILERD-SEALKSINRALELDKKYESALLLKRDVAKKLKV 328
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y + A + + + E L Y EKA +L R L+
Sbjct: 329 YDELAAACVGLLDVGYEDTELMYDLALSYYHTGELEKAYNITLDILKSLPRHLPTLKLQK 388
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ GQ ++ I L I+P++I L A Y +G+ A+
Sbjct: 389 EIMKKKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESAL 435
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 44/260 (16%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT------- 439
+G + + G Y A+ IF ++K + E + R R +RE EAA+ D
Sbjct: 624 KGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAALKDLNLALNYER 683
Query: 440 --------------------------EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
E + N AW+ A ++G+ AI
Sbjct: 684 KEKFLVLKKDVCKELKDYECVIETSKEILTINKKNISAWRDLAVAYDSMGKVDSAIATYR 743
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
ALE P++ +L+E K F A++ + + E+ L AL + +Y
Sbjct: 744 DALEIFPDNDVLLYELKATLLKHNRFADAIDVCKKILSIAPEDYDNLRDLSSALIKLKKY 803
Query: 534 KKAEEAHLKAIQLDRN--FLEAWGHLTQFYQDLANSEKALECLQQVL------YIDKRFS 585
+ A+E L+A++L++N LE G T +Y L N A+E + L +I + +
Sbjct: 804 EDAKEYLLRALELNKNAELLELLGD-TYYY--LKNYTSAIEHYKDALNLNASPHIYHKLA 860
Query: 586 KAYHLRGLLLHGLGQHKKAI 605
K Y+ G L + ++AI
Sbjct: 861 KGYYKVGDLQEAIKAIERAI 880
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D RL +GI +Y AI FD LK + + +AL +G + + A+ FT
Sbjct: 583 DMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALYEKGDSLIKLGNYDEALKIFT 642
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
I+ E +R R E A++DL+ AL +E ++ ++ + + KD+
Sbjct: 643 SLIKLERGNSEYIYKRAYLRFKKREYEAALKDLNLALNYERKEKFLVLKKDVCK-ELKDY 701
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+E + ++K+N SA+ L +A S+G+ A + A+++
Sbjct: 702 ECVIETSKEILTINKKNISAWRDLAVAYDSMGKVDSAIATYRDALEI 748
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 43/280 (15%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
CV + K SI+ + + + G A N + AI+ + +K DP ++ I G
Sbjct: 196 CVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILY 255
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ E E A+ F EAI+ +P+ ++W L EA++ +++ALE +
Sbjct: 256 KKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSINRALELDKKYESA 315
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKL---DKENKSAYTYLGLALSSIGEYKKAEEA--- 539
L + V K K ++ E +ACV L E+ L L+ GE +KA
Sbjct: 316 LLLKRDVAKKLKVYD---ELAAACVGLLDVGYEDTELMYDLALSYYHTGELEKAYNITLD 372
Query: 540 -------HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR-------FS 585
HL ++L + ++ G E+ + + +L I+ +
Sbjct: 373 ILKSLPRHLPTLKLQKEIMKKKGQW----------ERVISICEDILKIEPNDIGSLVDEA 422
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
KAY G L L +A + I+PSNIE LR
Sbjct: 423 KAYREVGKLESALNFAIRATE-------IEPSNIELWKLR 455
>gi|449119628|ref|ZP_21756024.1| hypothetical protein HMPREF9725_01489 [Treponema denticola H1-T]
gi|449122019|ref|ZP_21758365.1| hypothetical protein HMPREF9727_01125 [Treponema denticola MYR-T]
gi|449131739|ref|ZP_21767926.1| hypothetical protein HMPREF9724_02591 [Treponema denticola SP37]
gi|448938371|gb|EMB19304.1| hypothetical protein HMPREF9724_02591 [Treponema denticola SP37]
gi|448949460|gb|EMB30285.1| hypothetical protein HMPREF9727_01125 [Treponema denticola MYR-T]
gi|448950618|gb|EMB31440.1| hypothetical protein HMPREF9725_01489 [Treponema denticola H1-T]
Length = 370
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 114/240 (47%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++ LK +P Y E+++ RG + AI DF+ I+ P+ A+ R
Sbjct: 74 AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ +A+ D++ A++ +P + RG + ++ KD++ A+ + + +KL+ + A
Sbjct: 134 LEFGDFEKALSDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDA 193
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL +I +Y A + KA++L + + H+ L + A+ + +
Sbjct: 194 YFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIK 253
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I+ ++AY RG + L + +IKDL + + SN Y +A ++ E EA+
Sbjct: 254 INNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAI 313
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 3/265 (1%)
Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
I++S I+ ++ L RG+ KY AI F ++++ P P A R +
Sbjct: 78 INRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFG 137
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E A+SD AI+ +P +K RG+ L + AI + ++AL+ P +D R
Sbjct: 138 DFEKALSDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSR 197
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ KD+N+A+ D +KL + Y ++GL+ ++ EY A A K I+++
Sbjct: 198 GLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNT 257
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ Y L N + +++ L + + ++ + + L+ + +AI L
Sbjct: 258 DAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLE 317
Query: 610 SGLGIDPSNIECLYLRASCYHAIGE 634
G+ + P + ++A Y ++ E
Sbjct: 318 EGINLFPDYYDFYQVKAKIYRSLSE 342
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 7/251 (2%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
I Q+N KY I ++DP + RG + + AI D +++ NP+
Sbjct: 36 IYQMNLSKYERQI-------EKDPNNYKLYYERGYYYSLSGYYDLAIHDINRSLKINPNY 88
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
E+ RG A+ + EAI D S+ +E PN + R +F DF A+ D+++
Sbjct: 89 EESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKALSDINS 148
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+KLD ++ + G + +Y A + +A++L+ +A+ FY+ + +
Sbjct: 149 AIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYN 208
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
AL + L + R + Y GL + L ++ AI + + I+ ++ E R S
Sbjct: 209 SALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSI 268
Query: 629 YHAIGEYREAV 639
Y + Y ++
Sbjct: 269 YFILKNYDNSI 279
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI + Q LK +P +A RG ++ +A+SD+ +A++ + + + G
Sbjct: 173 YDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIG 232
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ AL E AI +K ++ A+ RG + F K+++ +++DL + L N
Sbjct: 233 LSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSN 292
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ + +AL S E +A + + I L ++ + + + Y+ L+ K
Sbjct: 293 EVVFYNKAVALYSKNELNEAIDCLEEGINLFPDYYDFYQVKAKIYRSLSEQTK 345
>gi|428305223|ref|YP_007142048.1| hypothetical protein Cri9333_1649 [Crinalium epipsammum PCC 9333]
gi|428246758|gb|AFZ12538.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 832
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 122/255 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A + G+Y A++ FDQ LK P +A +G A E A++ F +A++
Sbjct: 397 NKGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVK 456
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G A LG EA+ +AL+ +P+ + +GI K A+
Sbjct: 457 PDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAA 516
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + A+ G+AL +G ++A A+ KA+++ + EAW + +L
Sbjct: 517 FDQALKVKSDQHQAWNNKGIALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLG 576
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL Q L + + + +G++L LG +++A+ L + P++ E +
Sbjct: 577 CYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEALVAFDQALKVKPNDHEPWSNK 636
Query: 626 ASCYHAIGEYREAVI 640
+G Y+EA+I
Sbjct: 637 GIVLVNLGRYQEALI 651
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA G+ A++ +++ LK P EA +G + A++ F +A++
Sbjct: 533 NKGIALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVK 592
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + WK +G LG EA+ +AL+ +PN + +GIV + A+
Sbjct: 593 PDQHQVWKNKGIVLVNLGCYQEALVAFDQALKVKPNDHEPWSNKGIVLVNLGRYQEALIA 652
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + + G+ L ++G Y++A A + +++ + E W + L
Sbjct: 653 FDQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVKPDQYEVWNNKGIALGKLG 712
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL Q L + + ++ +G+ L LG++++AI L + P + + Y +
Sbjct: 713 RYQEALAAFDQTLKVKPDQYEVWNNKGIALVNLGRYQEAITAFDQTLKVKPDDDKIFYNK 772
Query: 626 ASCYHAIGEYREAV 639
A CY G +A+
Sbjct: 773 ACCYALQGNVEQAI 786
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A N G Y A++ FDQ LK P +A +G E A++ F +A++
Sbjct: 261 NKGVALGNLGHYEEALAAFDQALKVKPDQHQAWYNKGNTLVNLERYEEALAAFDQALKVK 320
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G LG EA+ +AL+ + + + +G K + A+
Sbjct: 321 PDDHQAWNNKGNVLGKLGRYEEALAAFDQALKVKSDQHQAWNNKGNALGKLGRYEEAIAA 380
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ ++ A+ G AL +G Y++A A + +++ + +AW + DL
Sbjct: 381 FDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNNKGNALGDLG 440
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
E+AL Q L + +A++ +G+ L LG ++A+ L + P
Sbjct: 441 RYEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKP 491
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA G A++ FDQ LK +A +G A E A++ + +A++
Sbjct: 499 NKGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGIALGKLGRDEEALAAYNKALKVK 558
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAWK +G LG EA+ +AL+ +P+ + +GIV + A+
Sbjct: 559 PDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEALVA 618
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + ++ G+ L ++G Y++A A + +++ + E W + +L
Sbjct: 619 FDQALKVKPNDHEPWSNKGIVLVNLGRYQEALIAFDQTLKVKPDQYEVWNNKGIVLVNLG 678
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ Q L + + ++ +G+ L LG++++A+ L + P E +
Sbjct: 679 RYQEAITAFDQTLKVKPDQYEVWNNKGIALGKLGRYQEALAAFDQTLKVKPDQYEVWNNK 738
Query: 626 ASCYHAIGEYREAV 639
+G Y+EA+
Sbjct: 739 GIALVNLGRYQEAI 752
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+YA AI+ DQ LK P +A +G A E A++ F +A++ P +AW +
Sbjct: 237 EYAVAITALDQALKVKPDDHQAWQNKGVALGNLGHYEEALAAFDQALKVKPDQHQAWYNK 296
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +AL+ +P+ + +G V K + A+ +K+ +
Sbjct: 297 GNTLVNLERYEEALAAFDQALKVKPDDHQAWNNKGNVLGKLGRYEEALAAFDQALKVKSD 356
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G AL +G Y++A A +A+++ + +AW + DL E+AL
Sbjct: 357 QHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAFD 416
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
Q L + +A++ +G L LG++++A+ L + P
Sbjct: 417 QTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKP 457
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A G+Y AI+ FDQ LK P +A +G A E A++ F + ++
Sbjct: 363 NKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAFDQTLKVK 422
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G A LG EA+ +AL+ +P+ + +GI K A+
Sbjct: 423 PDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAA 482
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + A+ G+AL +G ++A A +A+++ + +AW + L
Sbjct: 483 FDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGIALGKLG 542
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+AL + L + +A+ +G L LG +++A+ L + P + +
Sbjct: 543 RDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVKPDQHQVWKNK 602
Query: 626 ASCYHAIGEYREAVI 640
+G Y+EA++
Sbjct: 603 GIVLVNLGCYQEALV 617
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 112/245 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A++ FDQ LK +A +G A E AI+ F +A++ P +AW
Sbjct: 338 GRYEEALAAFDQALKVKSDQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNN 397
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG EA+ + L+ +P+ + +G + A+ +K+
Sbjct: 398 KGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKP 457
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G+AL +G ++A A +A+++ + +AW + L E+AL
Sbjct: 458 DQHQAWNNKGIALGKLGCDEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAF 517
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q L + +A++ +G+ L LG+ ++A+ + L + P E + + +G
Sbjct: 518 DQALKVKSDQHQAWNNKGIALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGC 577
Query: 635 YREAV 639
Y+EA+
Sbjct: 578 YQEAL 582
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 118/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A + G+Y A++ FDQ LK P +A +G A E A++ F +A++
Sbjct: 431 NKGNALGDLGRYEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVK 490
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW +G A LG EA+ +AL+ + + + +GI K A+
Sbjct: 491 PDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGIALGKLGRDEEALAA 550
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K+ + A+ G L ++G Y++A A +A+++ + + W + +L
Sbjct: 551 YNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLG 610
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL Q L + + + +G++L LG++++A+ L + P E +
Sbjct: 611 CYQEALVAFDQALKVKPNDHEPWSNKGIVLVNLGRYQEALIAFDQTLKVKPDQYEVWNNK 670
Query: 626 ASCYHAIGEYREAV 639
+G Y+EA+
Sbjct: 671 GIVLVNLGRYQEAI 684
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G VN +Y A++ FDQ LK P +A +G E A++ F +A++
Sbjct: 295 NKGNTLVNLERYEEALAAFDQALKVKPDDHQAWNNKGNVLGKLGRYEEALAAFDQALKVK 354
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+AW +G A LG EAI +AL+ +P+ + +G + A+
Sbjct: 355 SDQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAA 414
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + A+ G AL +G Y++A A +A+++ + +AW + L
Sbjct: 415 FDQTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKPDQHQAWNNKGIALGKLG 474
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
E+AL Q L + +A++ +G+ L LG ++A+ L +
Sbjct: 475 CDEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKV 523
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 97/211 (45%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+E AI+ +A++ P +AW+ +G A LG EA+ +AL+ +P+ +
Sbjct: 236 KEYAVAITALDQALKVKPDDHQAWQNKGVALGNLGHYEEALAAFDQALKVKPDQHQAWYN 295
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G + + A+ +K+ ++ A+ G L +G Y++A A +A+++
Sbjct: 296 KGNTLVNLERYEEALAAFDQALKVKPDDHQAWNNKGNVLGKLGRYEEALAAFDQALKVKS 355
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ +AW + L E+A+ Q L + +A++ +G L LG++++A+
Sbjct: 356 DQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAF 415
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + P + + + +G Y EA+
Sbjct: 416 DQTLKVKPDQHQAWNNKGNALGDLGRYEEAL 446
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 15/207 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI VN G+Y A+ FDQ LK P E +G + AI+ F + ++
Sbjct: 635 NKGIVLVNLGRYQEALIAFDQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVK 694
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W +G A LG EA+ + L+ +P+ ++ + +GI + A+
Sbjct: 695 PDQYEVWNNKGIALGKLGRYQEALAAFDQTLKVKPDQYEVWNNKGIALVNLGRYQEAITA 754
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ ++ + + G ++A +AI LD Y+DLA
Sbjct: 755 FDQTLKVKPDDDKIFYNKACCYALQGNVEQAINNLQQAINLDPK-----------YRDLA 803
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRG 592
++ + +QQ +RF +G
Sbjct: 804 KTDSDFDAMQQA----ERFQALISFKG 826
>gi|193215483|ref|YP_001996682.1| tetratricopeptide domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193088960|gb|ACF14235.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
ATCC 35110]
Length = 320
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 15/289 (5%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
E + + +F I + + F SR A G Y++AI+ + Q ++ + + +A +
Sbjct: 12 EYRLSIEFATKAIELAPTCEPAF-FSRASAHFMLGDYSAAIADYSQTIQLNEAHIDAYLA 70
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A+ + A++DF+E + + E + RG LG EA+ DL + + +P
Sbjct: 71 RGGAKLALGNYQGALADFSEVVSRDAKNPEGYNCRGTTNYLLGNYSEALDDLVQGIRLDP 130
Query: 481 NSADILHE-----RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ L E R ++ + ++ AA+ DL +KLD +N AY G A Y
Sbjct: 131 QTG--LTELAYSSRSMIEYDHGNYAAAIADLGEVIKLDPQNPDAYYSRGSANYLAKNYDV 188
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN-----SEKALECLQQVLYIDKRFSKAYHL 590
A + KAIQL N +L + A + A+E Q + + + AY
Sbjct: 189 AVKDFSKAIQL--NLPNEKAYLAHLFSGTAQIGRGYYQSAVEHFSQAIELQNDCATAYTN 246
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG+ LG + ++D+ + L +DP N + + Y + + ++AV
Sbjct: 247 RGIAQIELGNYDDGLQDVIAALRLDPQNADAYFYAGKAYSLLKQEKKAV 295
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 6/234 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L+RG A++ G Y A++ F +++ D PE RGT A+ D +
Sbjct: 65 IDAYLARGGAKLALGNYQGALADFSEVVSRDAKNPEGYNCRGTTNYLLGNYSEALDDLVQ 124
Query: 441 AIQSNPSAG---EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
I+ +P G A+ R G AI DL + ++ +P + D + RG N+ K
Sbjct: 125 GIRLDPQTGLTELAYSSRSMIEYDHGNYAAAIADLGEVIKLDPQNPDAYYSRGSANYLAK 184
Query: 498 DFNAAVEDLSACVKLDKENKSAY---TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+++ AV+D S ++L+ N+ AY + G A G Y+ A E +AI+L + A+
Sbjct: 185 NYDVAVKDFSKAIQLNLPNEKAYLAHLFSGTAQIGRGYYQSAVEHFSQAIELQNDCATAY 244
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ +L N + L+ + L +D + + AY G L Q KKA++ +
Sbjct: 245 TNRGIAQIELGNYDDGLQDVIAALRLDPQNADAYFYAGKAYSLLKQEKKAVEQI 298
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SR + + + G YA+AI+ +++K DP P+A RG+A + + A+ DF++AIQ N
Sbjct: 141 SRSMIEYDHGNYAAAIADLGEVIKLDPQNPDAYYSRGSANYLAKNYDVAVKDFSKAIQLN 200
Query: 446 PSAGEAWKRR---GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+A+ G A+ G A++ S+A+E + + A RGI + +++
Sbjct: 201 LPNEKAYLAHLFSGTAQIGRGYYQSAVEHFSQAIELQNDCATAYTNRGIAQIELGNYDDG 260
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++D+ A ++LD +N AY Y G A S + + KKA E +A +L+
Sbjct: 261 LQDVIAALRLDPQNADAYFYAGKAYSLLKQEKKAVEQIKQAARLE 305
>gi|449125237|ref|ZP_21761539.1| hypothetical protein HMPREF9723_01583 [Treponema denticola OTK]
gi|448939206|gb|EMB20123.1| hypothetical protein HMPREF9723_01583 [Treponema denticola OTK]
Length = 338
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI + + ++ DP Y EA + RG + E E A++DF I+ NP +A+ +G
Sbjct: 59 AIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKALADFDRIIELNPKEDKAYYFKGLLF 118
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G +AI++L+ A+ + R + ++ A ED++ +KL+ ++
Sbjct: 119 NDAGNYNKAIKNLNTAINLNDKDYEYYEARSRAYEQNNEYEKAFEDINTAIKLNPKSAKL 178
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G A AI+LD N + + L Y ++ + +A E + +++
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIAIKLDSNDIWPYNGLLFIYLEMDKNNEAFEIVNKMIK 238
Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ + Y +RG L GQ+K+AI+D ++G+ + P N +R Y + EY++A
Sbjct: 239 MKPSWIGILYGIRGTLFSMRGQYKEAIEDCNTGIRMYPHNASLYNIRGKIYFDLKEYKKA 298
Query: 639 V 639
+
Sbjct: 299 I 299
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 514 KENKSAYTYLGLALSSIGEYK---KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
K+N S Y +A ++ E K +A + KAI+ D ++EA+ + + Y + EKA
Sbjct: 34 KQNYSQAEYFNIAGNTAKEKKDRTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKA 93
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
L +++ ++ + KAY+ +GLL + G + KAIK+L++ + ++ + E R+ Y
Sbjct: 94 LADFDRIIELNPKEDKAYYFKGLLFNDAGNYNKAIKNLNTAINLNDKDYEYYEARSRAYE 153
Query: 631 AIGEYREAV 639
EY +A
Sbjct: 154 QNNEYEKAF 162
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%)
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ N S E + G + AI +KA+E +P + RG + + + A
Sbjct: 34 KQNYSQAEYFNIAGNTAKEKKDRTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKA 93
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D ++L+ + AY + GL + G Y KA + AI L+ E + ++ Y+
Sbjct: 94 LADFDRIIELNPKEDKAYYFKGLLFNDAGNYNKAIKNLNTAINLNDKDYEYYEARSRAYE 153
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
EKA E + + ++ + +K Y+LRG L + AI D + +D ++I
Sbjct: 154 QNNEYEKAFEDINTAIKLNPKSAKLYNLRGRLHEHFERTDDAINDFKIAIKLDSNDI 210
>gi|154341943|ref|XP_001566923.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064248|emb|CAM40447.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 849
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 115/253 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G+ +A++++ + L+ P + +AL R + AI D+T A++ +P
Sbjct: 417 RGLQHRQSGELEAAVAMYTKALEISPTHFKALFNRAFCEDKLKNYARAIDDYTAALELDP 476
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ G + G A+Q ++A+E + + D H RG + K + AA+ D
Sbjct: 477 RNPFTYYNLGISYDHTGSHARAVQAFTRAIELDDHHPDFFHNRGFMQRKQGAYTAAIADY 536
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+A + LD + ++ + +G Y +A + A+++D + + + L
Sbjct: 537 TAAIFLDPNHFKSHYNRAYCFAKLGYYDEAVADYTAALKIDSDNSNVYHNRGAALAKLGK 596
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
A+E + L D + + + + RGL+ L Q+ +A+ D + + +D N L+ R
Sbjct: 597 LRAAVEDFNRALKRDPKLAFSLNARGLVYDQLQQYDRAVADFTEAIRLDKRNPTWLHNRG 656
Query: 627 SCYHAIGEYREAV 639
Y +GE A+
Sbjct: 657 HTYRNMGELELAI 669
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 1/259 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF +RG Q +G Y +AI+ + + DP + ++ R A + A++D+T A
Sbjct: 514 DFFHNRGFMQRKQGAYTAAIADYTAAIFLDPNHFKSHYNRAYCFAKLGYYDEAVADYTAA 573
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ + + RG A A LG+ A++D ++AL+ +P A L+ RG+V + + ++
Sbjct: 574 LKIDSDNSNVYHNRGAALAKLGKLRAAVEDFNRALKRDPKLAFSLNARGLVYDQLQQYDR 633
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
AV D + ++LDK N + G ++GE + A + AI++ + +
Sbjct: 634 AVADFTEAIRLDKRNPTWLHNRGHTYRNMGELELAIADYSAAIKMAPHGHTTYSSRAYAL 693
Query: 562 QDLANSEKALECLQQVLYIDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+ L E A+E + L +K + R L + AI+D S L DP +
Sbjct: 694 RKLGRYEAAIEDYTKALNEQPGVRTKVLNSRAYCFARLNLFEYAIRDYSEVLATDPVDAH 753
Query: 621 CLYLRASCYHAIGEYREAV 639
LY R + G+Y A+
Sbjct: 754 ALYNRGISFEMCGKYSAAI 772
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 34/188 (18%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ +RG GE A+ +KALE P L R K K++ A++D +A ++
Sbjct: 414 FYQRGLQHRQSGELEAAVAMYTKALEISPTHFKALFNRAFCEDKLKNYARAIDDYTAALE 473
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
LD N Y LG++ G + +A +A +AI+LD H F+
Sbjct: 474 LDPRNPFTYYNLGISYDHTGSHARAVQAFTRAIELD-------DHHPDFF---------- 516
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
H RG + G + AI D ++ + +DP++ + Y RA C+
Sbjct: 517 -----------------HNRGFMQRKQGAYTAAIADYTAAIFLDPNHFKSHYNRAYCFAK 559
Query: 632 IGEYREAV 639
+G Y EAV
Sbjct: 560 LGYYDEAV 567
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ---SN 445
A++N +YA I + ++L DP+ AL RG + + AAI DFT AI+
Sbjct: 728 FARLNLFEYA--IRDYSEVLATDPVDAHALYNRGISFEMCGKYSAAIDDFTRAIRRAPEA 785
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
PS A+ RG +R L + +A+ DL +AL +
Sbjct: 786 PSTANAYYSRGTSRLQLHQVPQAVGDLKQALRLD 819
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 35/168 (20%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +Y A++ F + ++ D P L RG ELE AI+D++ AI+
Sbjct: 620 ARGLVYDQLQQYDRAVADFTEAIRLDKRNPTWLHNRGHTYRNMGELELAIADYSAAIKMA 679
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALE----------------------FE---- 479
P + R A LG AI+D +KAL FE
Sbjct: 680 PHGHTTYSSRAYALRKLGRYEAAIEDYTKALNEQPGVRTKVLNSRAYCFARLNLFEYAIR 739
Query: 480 ---------PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
P A L+ RGI ++AA++D + ++ E S
Sbjct: 740 DYSEVLATDPVDAHALYNRGISFEMCGKYSAAIDDFTRAIRRAPEAPS 787
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 13/109 (11%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYP-------------EALIGRGTARAFQRE 430
RL R A V YASA + + +++ P EAL RG RA +
Sbjct: 48 RLLRAKAYVQLHNYASACADLESWIQKTGYTPPDTSGDVAADSLTEALFYRGVCRARLSQ 107
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
++ A+ DFTE +Q P A R A L + V AI D AL+ +
Sbjct: 108 VKDAVGDFTEVLQREPGHRRAQYERAACHARLDDYVNAIADYEAALQMD 156
>gi|307152887|ref|YP_003888271.1| hypothetical protein Cyan7822_3041 [Cyanothece sp. PCC 7822]
gi|306983115|gb|ADN14996.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 237
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SVD+ + +G+ G Y A+ F++ LK DP +A RG ++ ++ A+ DF
Sbjct: 51 SVDW-VEQGVNNTQAGNYQQALENFNKALKLDPNNVDAYYNRGFVYSYLKDFPKALEDFQ 109
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+Q P EA+ RG LGE +AI D + AL+F PN A + G+ +
Sbjct: 110 KALQLEPDLVEAYINRGNVYLELGEYQKAIADYTAALKFNPNEAFAHNNIGLAYLNLGEP 169
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
A +L+ V+LD AY GLA S +G+ +KA KA QL R
Sbjct: 170 VRATLELTKAVELDPNYGEAYYNRGLAFSDVGDQQKARSDFQKAAQLWR 218
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W +G G +A+++ +KAL+ +PN+ D + RG V KDF A+ED ++
Sbjct: 54 WVEQGVNNTQAGNYQQALENFNKALKLDPNNVDAYYNRGFVYSYLKDFPKALEDFQKALQ 113
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEK 569
L+ + AY G +GEY+KA + A++ + N EA+ H + Y +L +
Sbjct: 114 LEPDLVEAYINRGNVYLELGEYQKAIADYTAALKFNPN--EAFAHNNIGLAYLNLGEPVR 171
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
A L + + +D + +AY+ RGL +G +KA D
Sbjct: 172 ATLELTKAVELDPNYGEAYYNRGLAFSDVGDQQKARSDF 210
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 78/139 (56%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ A+ +F +A++ +P+ +A+ RG + L + +A++D KAL+ EP+ + RG
Sbjct: 68 QQALENFNKALKLDPNNVDAYYNRGFVYSYLKDFPKALEDFQKALQLEPDLVEAYINRGN 127
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V + ++ A+ D +A +K + A+ +GLA ++GE +A KA++LD N+
Sbjct: 128 VYLELGEYQKAIADYTAALKFNPNEAFAHNNIGLAYLNLGEPVRATLELTKAVELDPNYG 187
Query: 552 EAWGHLTQFYQDLANSEKA 570
EA+ + + D+ + +KA
Sbjct: 188 EAYYNRGLAFSDVGDQQKA 206
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
NS D + E+G+ N + ++ A+E+ + +KLD N AY G S + ++ KA E
Sbjct: 50 NSVDWV-EQGVNNTQAGNYQQALENFNKALKLDPNNVDAYYNRGFVYSYLKDFPKALEDF 108
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KA+QL+ + +EA+ + Y +L +KA+ L + + A++ GL LG+
Sbjct: 109 QKALQLEPDLVEAYINRGNVYLELGEYQKAIADYTAALKFNPNEAFAHNNIGLAYLNLGE 168
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+A +L+ + +DP+ E Y R + +G+ ++A
Sbjct: 169 PVRATLELTKAVELDPNYGEAYYNRGLAFSDVGDQQKA 206
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L N++KA++ LD +Y NR F YS L+ + D KALQL+P L++AYI
Sbjct: 70 ALENFNKALK-LDPNNVDAY-----YNRGFVYSYLKDFPKALEDFQKALQLEPDLVEAYI 123
Query: 108 LKGCAFSALGRKEEALS 124
+G + LG ++A++
Sbjct: 124 NRGNVYLELGEYQKAIA 140
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
N ++ALE + L +D AY+ RG + L KA++D L ++P +E
Sbjct: 65 GNYQQALENFNKALKLDPNNVDAYYNRGFVYSYLKDFPKALEDFQKALQLEPDLVEAYIN 124
Query: 625 RASCYHAIGEYREAV 639
R + Y +GEY++A+
Sbjct: 125 RGNVYLELGEYQKAI 139
>gi|427737000|ref|YP_007056544.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
gi|427372041|gb|AFY55997.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
Length = 722
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 111/244 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ + Q ++ P Y +A G+G + A+S + +AI+ P+ E+W+ R
Sbjct: 355 RYEDALDNYKQAIEIKPEYAQAWNGQGRVLYELNSHKEALSAYDKAIEIEPNYQESWRGR 414
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EAI KAL+ +P S +L+ RG K ++ A++ V+L E
Sbjct: 415 GFVLNKLKRYQEAIYSFDKALKLKPESPKVLNARGEALRNLKRYDEAIQSYDKAVELQPE 474
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ L ++ YK A + + I+L N AW + +L AL+
Sbjct: 475 YDQAWYNKAWVLYNLKRYKDALATYEQVIRLKPNNELAWYNSGNALVNLNRQRDALKAYS 534
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + F +A+ RG +L L ++ +A++ L P+N + LY + H + Y
Sbjct: 535 KAVQYKPSFYQAWLSRGNILITLRRYPEAVESFQEVLKYQPNNFDALYSKGWALHQMQRY 594
Query: 636 REAV 639
+AV
Sbjct: 595 EQAV 598
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 113/240 (47%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+S +D+ ++ +P Y E+ GRG + + AI F +A++ P + + RG+A
Sbjct: 393 ALSAYDKAIEIEPNYQESWRGRGFVLNKLKRYQEAIYSFDKALKLKPESPKVLNARGEAL 452
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L EAIQ KA+E +P + + V + K + A+ ++L N+ A
Sbjct: 453 RNLKRYDEAIQSYDKAVELQPEYDQAWYNKAWVLYNLKRYKDALATYEQVIRLKPNNELA 512
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G AL ++ + A +A+ KA+Q +F +AW L +A+E Q+VL
Sbjct: 513 WYNSGNALVNLNRQRDALKAYSKAVQYKPSFYQAWLSRGNILITLRRYPEAVESFQEVLK 572
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A + +G LH + ++++A+ + ++ + Y R + + + +Y EA+
Sbjct: 573 YQPNNFDALYSKGWALHQMQRYEQAVASYDKAIAQRRNSYKVWYSRGNSVYKLQKYPEAL 632
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 106/237 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A N +Y AI +D+ ++ P Y +A + + + A++ + + I+
Sbjct: 447 ARGEALRNLKRYDEAIQSYDKAVELQPEYDQAWYNKAWVLYNLKRYKDALATYEQVIRLK 506
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ AW G A L +A++ SKA++++P+ RG + + + AVE
Sbjct: 507 PNNELAWYNSGNALVNLNRQRDALKAYSKAVQYKPSFYQAWLSRGNILITLRRYPEAVES 566
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K N A G AL + Y++A ++ KAI RN + W L
Sbjct: 567 FQEVLKYQPNNFDALYSKGWALHQMQRYEQAVASYDKAIAQRRNSYKVWYSRGNSVYKLQ 626
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+AL + + K S++++ +G L LG+ ++A+ ++ + +P E +
Sbjct: 627 KYPEALSAYNRAIRYKKDHSESWYSKGNTLFNLGKDEEALAAYNTAIKYNPDYREAI 683
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+ D L+++ ++ + + A+++ +++ E A+ G L + +K+A A+
Sbjct: 339 NAGD-LYKKANTFYELQRYEDALDNYKQAIEIKPEYAQAWNGQGRVLYELNSHKEALSAY 397
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI+++ N+ E+W L ++A+ + L + K + RG L L +
Sbjct: 398 DKAIEIEPNYQESWRGRGFVLNKLKRYQEAIYSFDKALKLKPESPKVLNARGEALRNLKR 457
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +AI+ + + P + Y +A + + Y++A+
Sbjct: 458 YDEAIQSYDKAVELQPEYDQAWYNKAWVLYNLKRYKDAL 496
>gi|427719642|ref|YP_007067636.1| hypothetical protein Cal7507_4431 [Calothrix sp. PCC 7507]
gi|427352078|gb|AFY34802.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 224
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 92/159 (57%), Gaps = 2/159 (1%)
Query: 380 SVDFR--LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+ DF+ ++G+ ++ +G + AI+ F+ +++ +P + E RG A++ R+ +AAI+D
Sbjct: 34 AADFQGYYNQGVQKLEQGNFNGAIADFNSVVQLNPQFYEGFCLRGLAKSQLRDFKAAIAD 93
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +A++ NP+ +A+ RG A A LG +AI D + ++ +P S D + G N++
Sbjct: 94 YNQALRLNPNHADAYNSRGTAYAELGSLPDAIADFHQTIKIDPTSVDAYYNLGSANYRQG 153
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ A+ + ++ +K++ AY GLA ++GE + A
Sbjct: 154 NHKQAIANFNSALKINPNLADAYGNRGLAQYALGEKRTA 192
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 10/186 (5%)
Query: 399 SAISIFDQILKEDPMYP------EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
SA+S + +P P + +G + Q AI+DF +Q NP E +
Sbjct: 15 SALSGMPTVFAREPQIPLKAADFQGYYNQGVQKLEQGNFNGAIADFNSVVQLNPQFYEGF 74
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG A++ L + AI D ++AL PN AD + RG + A+ D +K+
Sbjct: 75 CLRGLAKSQLRDFKAAIADYNQALRLNPNHADAYNSRGTAYAELGSLPDAIADFHQTIKI 134
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKA 570
D + AY LG A G +K+A A++++ N +A+G+ L Q+ L A
Sbjct: 135 DPTSVDAYYNLGSANYRQGNHKQAIANFNSALKINPNLADAYGNRGLAQY--ALGEKRTA 192
Query: 571 LECLQQ 576
+ LQQ
Sbjct: 193 IADLQQ 198
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 78/153 (50%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +G+ + +FN A+ D ++ V+L+ + + GLA S + ++K A + +A++L
Sbjct: 41 YNQGVQKLEQGNFNGAIADFNSVVQLNPQFYEGFCLRGLAKSQLRDFKAAIADYNQALRL 100
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ N +A+ Y +L + A+ Q + ID AY+ G + G HK+AI
Sbjct: 101 NPNHADAYNSRGTAYAELGSLPDAIADFHQTIKIDPTSVDAYYNLGSANYRQGNHKQAIA 160
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +S L I+P+ + R +A+GE R A+
Sbjct: 161 NFNSALKINPNLADAYGNRGLAQYALGEKRTAI 193
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
AL G T A + ++ +DF + + +G + G AI D + +
Sbjct: 16 ALSGMPTVFAREPQIPLKAADF-----------QGYYNQGVQKLEQGNFNGAIADFNSVV 64
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ P + RG+ + +DF AA+ D + ++L+ + AY G A + +G A
Sbjct: 65 QLNPQFYEGFCLRGLAKSQLRDFKAAIADYNQALRLNPNHADAYNSRGTAYAELGSLPDA 124
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+ I++D ++A+ +L N ++A+ L I+ + AY RGL +
Sbjct: 125 IADFHQTIKIDPTSVDAYYNLGSANYRQGNHKQAIANFNSALKINPNLADAYGNRGLAQY 184
Query: 597 GLGQHKKAIKDL 608
LG+ + AI DL
Sbjct: 185 ALGEKRTAIADL 196
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A G AI+ F Q +K DP +A G+A Q + AI++F A++ N
Sbjct: 110 SRGTAYAELGSLPDAIADFHQTIKIDPTSVDAYYNLGSANYRQGNHKQAIANFNSALKIN 169
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKA 475
P+ +A+ RG A+ ALGE AI DL +A
Sbjct: 170 PNLADAYGNRGLAQYALGEKRTAIADLQQA 199
>gi|298246522|ref|ZP_06970328.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
gi|297554003|gb|EFH87868.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
Length = 747
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 129/302 (42%), Gaps = 34/302 (11%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++ ++ S++ RG+ Q G++ A+ F + L+ DP +L G+G A R+
Sbjct: 366 QVIRTDSLNAQAWQGRGLTQALNGQHREALQSFTRALQLDPDLVTSLNGKGVALNRLRQN 425
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALG---------------------------- 463
A+ F AI P AW +G A +ALG
Sbjct: 426 RDALQSFDRAILLEPGNAVAWNGKGAALSALGLPEQALNAFDTALSFDPRMALAWSNKSL 485
Query: 464 ------ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
+ EA+Q +AL +EPNSA + +G++ + A + +K D
Sbjct: 486 ILRQMRKYEEALQASEQALSYEPNSALNWNSKGLILLEMGRLREAYQAYQEALKRDSRFA 545
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
A +G L + ++K A + + +A+Q D N+++ W Q Q+L N ++LE ++
Sbjct: 546 PALYGMGNVLYAQQKFKSALDNYDRALQFDPNYVKVWERRGQLLQELGNYRRSLESFERA 605
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
ID F+ A+ + +L + ++ A+ L +PS L + + + +G Y
Sbjct: 606 TQIDPSFAPAWLGKATVLSRMERYDMALNAYEEALRRNPSLPAALNGKGNALYRLGNYSA 665
Query: 638 AV 639
A+
Sbjct: 666 AL 667
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 109/244 (44%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+ A+ ++DQ+++ D + +A GRG +A + A+ FT A+Q +P + +
Sbjct: 356 RVPEALKLYDQVIRTDSLNAQAWQGRGLTQALNGQHREALQSFTRALQLDPDLVTSLNGK 415
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L ++ +A+Q +A+ EP +A + +G A+ + D
Sbjct: 416 GVALNRLRQNRDALQSFDRAILLEPGNAVAWNGKGAALSALGLPEQALNAFDTALSFDPR 475
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A++ L L + +Y++A +A +A+ + N W ++ +A + Q
Sbjct: 476 MALAWSNKSLILRQMRKYEEALQASEQALSYEPNSALNWNSKGLILLEMGRLREAYQAYQ 535
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ L D RF+ A + G +L+ + K A+ + L DP+ ++ R +G Y
Sbjct: 536 EALKRDSRFAPALYGMGNVLYAQQKFKSALDNYDRALQFDPNYVKVWERRGQLLQELGNY 595
Query: 636 REAV 639
R ++
Sbjct: 596 RRSL 599
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 105/212 (49%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
QR + A+ + + I+++ +AW+ RG +A G+ EA+Q ++AL+ +P+ L+
Sbjct: 354 QRRVPEALKLYDQVIRTDSLNAQAWQGRGLTQALNGQHREALQSFTRALQLDPDLVTSLN 413
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+G+ + + A++ + L+ N A+ G ALS++G ++A A A+ D
Sbjct: 414 GKGVALNRLRQNRDALQSFDRAILLEPGNAVAWNGKGAALSALGLPEQALNAFDTALSFD 473
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
AW + + + + E+AL+ +Q L + + ++ +GL+L +G+ ++A +
Sbjct: 474 PRMALAWSNKSLILRQMRKYEEALQASEQALSYEPNSALNWNSKGLILLEMGRLREAYQA 533
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L D LY + +A +++ A+
Sbjct: 534 YQEALKRDSRFAPALYGMGNVLYAQQKFKSAL 565
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+ + G+ A + + LK D + AL G G Q++ ++A+ ++ A+Q +
Sbjct: 516 SKGLILLEMGRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQKFKSALDNYDRALQFD 575
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + W+RRGQ LG +++ +A + +P+ A + V + + ++ A+
Sbjct: 576 PNYVKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPAWLGKATVLSRMERYDMALNA 635
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++ + +A G AL +G Y A A+ A++++ + A
Sbjct: 636 YEEALRRNPSLPAALNGKGNALYRLGNYSAALSAYDNALKVNPRMVSA 683
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 104/267 (38%), Gaps = 36/267 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A G A++ FD L DP A + R+ E A+ +A+ P
Sbjct: 449 KGAALSALGLPEQALNAFDTALSFDPRMALAWSNKSLILRQMRKYEEALQASEQALSYEP 508
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ W +G +G EA Q +AL+ + A L+ G V + + F +A+++
Sbjct: 509 NSALNWNSKGLILLEMGRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQKFKSALDNY 568
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------------ 554
++ D + G L +G Y+++ E+ +A Q+D +F AW
Sbjct: 569 DRALQFDPNYVKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPAWLGKATVLSRMER 628
Query: 555 -----------------------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
G Y+ L N AL L ++ R A H +
Sbjct: 629 YDMALNAYEEALRRNPSLPAALNGKGNALYR-LGNYSAALSAYDNALKVNPRMVSALHNK 687
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSN 618
L+L LG++ +A+ S + + P++
Sbjct: 688 SLILKLLGRYNEALAAAESAIRLAPND 714
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 24 DELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSYEIQDICNRAFC 78
D+++R DS+ A A R L +L+++++A+++ L + + +
Sbjct: 365 DQVIRTDSLNAQAWQGRGLTQALNGQHREALQSFTRALQLDPDL------VTSLNGKGVA 418
Query: 79 YSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH----AL 134
++L ++ ++ D+A+ L+P A+ KG A SALG E+AL+ ++ AL
Sbjct: 419 LNRLRQNRDALQSFDRAILLEPGNAVAWNGKGAALSALGLPEQALNAFDTALSFDPRMAL 478
Query: 135 ---HQSADLKQFLELEELLTAAKQ 155
++S L+Q + EE L A++Q
Sbjct: 479 AWSNKSLILRQMRKYEEALQASEQ 502
>gi|193214090|ref|YP_001995289.1| hypothetical protein Ctha_0371 [Chloroherpeton thalassium ATCC
35110]
gi|193087567|gb|ACF12842.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
35110]
Length = 361
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 14/217 (6%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+LE A+ AI+ NPS EA+ RG + +LG + E+I D S+AL++ PNS I + R
Sbjct: 60 DLEKALQSLNGAIKKNPSYAEAYNFRGIVKKSLGRTQESIADFSQALKYSPNSTTIYNNR 119
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI---QL 546
GI + + A+ED + + +D N + L+++G K A +++ AI
Sbjct: 120 GISLYLVGRYQEALEDFNESLAIDNLNAEIWANRARTLTALGLTKDAIDSYNNAIGKEAY 179
Query: 547 DRNFLEAWGHLTQ---FYQD-LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
D + G L FY D LA+ EKALE + ++ Y R + LG +
Sbjct: 180 DPELYKLRGDLYAKLGFYGDALADFEKALE-------LRDSYALCYLSRADVYRRLGLYA 232
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D++ + + PSN E Y R + G Y +A+
Sbjct: 233 EAIEDVNVAIKLIPSNPEGYYYRGLILISRGGYPQAI 269
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 109/246 (44%), Gaps = 20/246 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG---TARAFQRELEAAISDFTEAI 442
+RGI+ G+Y A+ F++ L D + E R TA ++ AI + AI
Sbjct: 118 NRGISLYLVGRYQEALEDFNESLAIDNLNAEIWANRARTLTALGLTKD---AIDSYNNAI 174
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
E +K RG A LG +A+ D KALE + A R V + + A
Sbjct: 175 GKEAYDPELYKLRGDLYAKLGFYGDALADFEKALELRDSYALCYLSRADVYRRLGLYAEA 234
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-----GH- 556
+ED++ +KL N Y Y GL L S G Y +A A+ D N+ A+ H
Sbjct: 235 IEDVNVAIKLIPSNPEGYYYRGLILISRGGYPQAIRNFDYALSQDPNYHLAYHARGVAHD 294
Query: 557 -LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
L Q+ +++ KA+E ++Y RGL L + KA KD+ + L ++
Sbjct: 295 SLAQYQMSISDYTKAIELRANAW-------ESYFNRGLAYIHLNELVKAKKDIKTALDLN 347
Query: 616 PSNIEC 621
P+++E
Sbjct: 348 PTSVEA 353
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 114/248 (45%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
V+ G A+ + +K++P Y EA RG + + +I+DF++A++ +P++
Sbjct: 56 VSTGDLEKALQSLNGAIKKNPSYAEAYNFRGIVKKSLGRTQESIADFSQALKYSPNSTTI 115
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ RG + +G EA++D +++L + +A+I R A++ + +
Sbjct: 116 YNNRGISLYLVGRYQEALEDFNESLAIDNLNAEIWANRARTLTALGLTKDAIDSYNNAIG 175
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ + Y G + +G Y A KA++L ++ + Y+ L +A+
Sbjct: 176 KEAYDPELYKLRGDLYAKLGFYGDALADFEKALELRDSYALCYLSRADVYRRLGLYAEAI 235
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
E + + + + Y+ RGL+L G + +AI++ L DP+ + R + +
Sbjct: 236 EDVNVAIKLIPSNPEGYYYRGLILISRGGYPQAIRNFDYALSQDPNYHLAYHARGVAHDS 295
Query: 632 IGEYREAV 639
+ +Y+ ++
Sbjct: 296 LAQYQMSI 303
>gi|166365801|ref|YP_001658074.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
gi|166088174|dbj|BAG02882.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
Length = 707
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 123/245 (50%), Gaps = 1/245 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 347 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 406
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RGQA LG++ EA++ + L F P ++ + + + + ++AA + L + +
Sbjct: 407 RGQALDKLGKNQEALESFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQ 466
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ L+ + W L ALE
Sbjct: 467 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKANSLYQLNKINDALESY 526
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + +FS+A++ +G++L LG+ +A++ + + + + + + H +
Sbjct: 527 SKAGQFNPQFSQAHYSQGIILQKLGRKSEALEAFTQATKANSNYYQAWLNQGALLHQMER 586
Query: 635 YREAV 639
++EA+
Sbjct: 587 FQEAI 591
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 5/248 (2%)
Query: 396 KYASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALNTYEKAIQINPDSAWQAWLGRGQALDKLGKNQEALESFDRVLSFNPAASQAWQG 440
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + L+
Sbjct: 441 KADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALALES 500
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
+N + +L + + A E++ KA Q + F +A H +Q Q L +ALE
Sbjct: 501 DNALIWYQKANSLYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLGRKSEALE 558
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
Q + + +A+ +G LLH + + ++AI I E + ++ +
Sbjct: 559 AFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRL 618
Query: 633 GEYREAVI 640
G+Y +A+I
Sbjct: 619 GDYSQAII 626
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 34/262 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ FD++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGQALDKLGKNQEALESFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKALEKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++ ++ N A+E
Sbjct: 465 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKANSLYQLNKINDALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L +G +A EA +A + + N+ +AW +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRKSEALEAFTQATKANSNYYQAWLNQGALLHQM 584
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + +A+ EKA + QQ + K + +
Sbjct: 585 ERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAIIAYQQAIQRQKDNPETWKS 644
Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
G LGQ+++AI+ L
Sbjct: 645 LGNSCFKLGQYERAIQAYQESL 666
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G + EAI KA A++ G
Sbjct: 556 ALEAFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAW 615
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D++ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 616 YRLGDYSQAIIAYQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSN 671
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ +++ + F T+ +K+
Sbjct: 516 LNKINDALESYSKAGQFNPQFSQAHYSQGII------LQKLGRKSEALEAF--TQATKAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI
Sbjct: 568 SNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAIIA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACVKLDKENK 517
+ + ++ + K+D E +
Sbjct: 688 ELQQSSQNQTP--KVDNEEQ 705
>gi|434387104|ref|YP_007097715.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428018094|gb|AFY94188.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 267
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L G + G +A AI+ +D I++ DP A GRG A A + AI F A+
Sbjct: 4 LDTGDRLLGAGNFAEAIACYDLIIEIDPFQHHAWYGRGLALARSAKYREAIESFDCALNI 63
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ AW RG A LGE +A+ AL+ +++ L+ RG+ + ++
Sbjct: 64 QPNEEMAWINRGTAFGILGEFTQALASFDLALKINAYNSEALYGRGLALNQLGRNTESLA 123
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
VK+D +N A+ G+ L+ + Y+ A + +A+ ++ + +AW T +L
Sbjct: 124 SYERAVKIDSDNYKAWHNRGVLLNELTRYQDAIDCFDRALAVNPDLYQAWQSRTLSLLNL 183
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+A+ ++L ++ +A++ RG+ L L ++ +AI D L ID
Sbjct: 184 ERYAEAIINCDRLLALEPNNPEAFYQRGIALSMLTRYDEAIIDFDLALQID 234
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI+ + I+ +P AW RG A A + EAI+ AL +PN RG
Sbjct: 19 AIACYDLIIEIDPFQHHAWYGRGLALARSAKYREAIESFDCALNIQPNEEMAWINRGTAF 78
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+F A+ +K++ N A GLAL+ +G ++ ++ +A+++D + +A
Sbjct: 79 GILGEFTQALASFDLALKINAYNSEALYGRGLALNQLGRNTESLASYERAVKIDSDNYKA 138
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
W + +L + A++C + L ++ +A+ R L L L ++ +AI + L
Sbjct: 139 WHNRGVLLNELTRYQDAIDCFDRALAVNPDLYQAWQSRTLSLLNLERYAEAIINCDRLLA 198
Query: 614 IDPSNIECLYLRASCYHAIGEYREAVI 640
++P+N E Y R + Y EA+I
Sbjct: 199 LEPNNPEAFYQRGIALSMLTRYDEAII 225
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 34/203 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+A KY AI FD L P A I RGTA E A++ F A++ N
Sbjct: 39 GRGLALARSAKYREAIESFDCALNIQPNEEMAWINRGTAFGILGEFTQALASFDLALKIN 98
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV-- 503
EA RG A LG + E++ +A++ + ++ H RG++ + + A+
Sbjct: 99 AYNSEALYGRGLALNQLGRNTESLASYERAVKIDSDNYKAWHNRGVLLNELTRYQDAIDC 158
Query: 504 -----------------------------EDLSAC---VKLDKENKSAYTYLGLALSSIG 531
E + C + L+ N A+ G+ALS +
Sbjct: 159 FDRALAVNPDLYQAWQSRTLSLLNLERYAEAIINCDRLLALEPNNPEAFYQRGIALSMLT 218
Query: 532 EYKKAEEAHLKAIQLDRNFLEAW 554
Y +A A+Q+D + AW
Sbjct: 219 RYDEAIIDFDLALQIDSGYYLAW 241
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 37/202 (18%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---- 424
C I ++ ++ ++RG A G++ A++ FD LK + EAL GRG A
Sbjct: 59 CALNIQPNEEMAW---INRGTAFGILGEFTQALASFDLALKINAYNSEALYGRGLALNQL 115
Query: 425 -------RAFQRELEA-----------------------AISDFTEAIQSNPSAGEAWKR 454
+++R ++ AI F A+ NP +AW+
Sbjct: 116 GRNTESLASYERAVKIDSDNYKAWHNRGVLLNELTRYQDAIDCFDRALAVNPDLYQAWQS 175
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R + L EAI + + L EPN+ + ++RGI ++ A+ D +++D
Sbjct: 176 RTLSLLNLERYAEAIINCDRLLALEPNNPEAFYQRGIALSMLTRYDEAIIDFDLALQIDS 235
Query: 515 ENKSAYTYLGLALSSIGEYKKA 536
A+ G AL + + +A
Sbjct: 236 GYYLAWKNRGYALDRLARHSEA 257
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SR ++ +N +YA AI D++L +P PEA RG A + + AI DF A+Q +
Sbjct: 175 SRTLSLLNLERYAEAIINCDRLLALEPNNPEAFYQRGIALSMLTRYDEAIIDFDLALQID 234
Query: 446 PSAGEAWKRRGQARAALGESVEAI 469
AWK RG A L EA+
Sbjct: 235 SGYYLAWKNRGYALDRLARHSEAL 258
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 67/142 (47%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+F A+ +++D A+ GLAL+ +Y++A E+ A+ + N AW +
Sbjct: 15 NFAEAIACYDLIIEIDPFQHHAWYGRGLALARSAKYREAIESFDCALNIQPNEEMAWINR 74
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ L +AL L I+ S+A + RGL L+ LG++ +++ + ID
Sbjct: 75 GTAFGILGEFTQALASFDLALKINAYNSEALYGRGLALNQLGRNTESLASYERAVKIDSD 134
Query: 618 NIECLYLRASCYHAIGEYREAV 639
N + + R + + Y++A+
Sbjct: 135 NYKAWHNRGVLLNELTRYQDAI 156
>gi|67458702|ref|YP_246326.1| hypothetical protein RF_0310 [Rickettsia felis URRWXCal2]
gi|67004235|gb|AAY61161.1| Tetratricopeptide repeat domain containing protein [Rickettsia
felis URRWXCal2]
Length = 706
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 124/259 (47%), Gaps = 2/259 (0%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
++F +G KY AI D+I++ D + P +G+ ++ E AI F
Sbjct: 212 IEFYHKKGWILSELYKYDEAIECCDKIIEIDSLEPYGYFNKGSMLRLNKKYEEAIEAFNM 271
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI P+ E + +G+ L EA+++ +KA++FEP+ + + +G ++ K++
Sbjct: 272 AINLMPTEAELYYLKGRCLYELKRYKEAVKEFNKAIKFEPDISSYYY-KGQALYRLKEYK 330
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+E + + + + Y + L+L + Y++A E +A+++D Q
Sbjct: 331 KAIEAYNHALSYPQYDNYTYYFKALSLKKLERYEEAIEVFNEALKIDSKDERTLSAKGQV 390
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+L E+A++ + + ID + A + +G L L ++++AIK + IDP N
Sbjct: 391 LNELMRYEEAIKVFDKAIRIDPKNRNAIYAKGEALAKLMRYEEAIKAFDKTIRIDP-NYW 449
Query: 621 CLYLRASCYHAIGEYREAV 639
Y + Y+ + +Y+ A+
Sbjct: 450 KPYAKGWVYNRLAKYKNAI 468
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 126/295 (42%), Gaps = 38/295 (12%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D + + + E KY +AI FD++L +DP A + A +E A+
Sbjct: 8 LDKNFDKALLCLEEEKYETAIKYFDKVLNQDPFLSSAYSNKAFALKQLCRIEEALEVLDT 67
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH--ERGIVNFKFKD 498
AI+ NP + RG + LG EAI+ +AL+ + S D+L +G +
Sbjct: 68 AIKINPKISGYYDNRGIVLSILGLYEEAIKSYDQALKLD--SLDVLTFINKGWTLNNWGK 125
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+ L ++LD + AY ++L +G++ + + KA++++ N+ E +
Sbjct: 126 YRKALSVLDKAIELDPTDIKAYANKAISLEKLGKFDEMVHMYNKALEINPNYSELYFDRA 185
Query: 559 QFYQDLANSEKAL----------------------------------ECLQQVLYIDKRF 584
+ D+ EKAL EC +++ ID
Sbjct: 186 KALIDIGEKEKALIDINKAIEINPNEIEFYHKKGWILSELYKYDEAIECCDKIIEIDSLE 245
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y +G +L ++++AI+ + + + P+ E YL+ C + + Y+EAV
Sbjct: 246 PYGYFNKGSMLRLNKKYEEAIEAFNMAINLMPTEAELYYLKGRCLYELKRYKEAV 300
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 124/267 (46%), Gaps = 39/267 (14%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K S+ V +++G N GKY A+S+ D+ ++ DP +A + + + +
Sbjct: 104 KLDSLDVLTFINKGWTLNNWGKYRKALSVLDKAIELDPTDIKAYANKAISLEKLGKFDEM 163
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + +A++ NP+ E + R +A +GE +A+ D++KA+E PN + H++G +
Sbjct: 164 VHMYNKALEINPNYSELYFDRAKALIDIGEKEKALIDINKAIEINPNEIEFYHKKGWI-- 221
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
LS + +Y +A E K I++D LE +
Sbjct: 222 --------------------------------LSELYKYDEAIECCDKIIEIDS--LEPY 247
Query: 555 GHLTQFYQDLANS--EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
G+ + N E+A+E + + ++ Y+L+G L+ L ++K+A+K+ + +
Sbjct: 248 GYFNKGSMLRLNKKYEEAIEAFNMAINLMPTEAELYYLKGRCLYELKRYKEAVKEFNKAI 307
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAV 639
+P +I Y + + + EY++A+
Sbjct: 308 KFEP-DISSYYYKGQALYRLKEYKKAI 333
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 11/251 (4%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR- 454
+Y AI +FD+ ++ DP A+ +G A A E AI F + I+ +P+ WK
Sbjct: 396 RYEEAIKVFDKAIRIDPKNRNAIYAKGEALAKLMRYEEAIKAFDKTIRIDPNY---WKPY 452
Query: 455 -RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+G L + AI +K +E A +E + ++ K + A+ + ++L
Sbjct: 453 AKGWVYNRLAKYKNAINYFNKVIELGKAEAYTYYEIALASYNLKRYKTAIINYDKAIELG 512
Query: 514 KE----NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR-NFLEAWGHLTQFYQDLANSE 568
+ S Y+ G L +I Y+ A E++ K I+LD N++ + +L E
Sbjct: 513 IKALDLKVSTYSTKGDCLYNIKNYEAALESYNKVIELDPANYVHYYDKAYTL-DNLKRYE 571
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
+ALE +V+ ++ +S AY + + L ++ KAI + L I + Y +
Sbjct: 572 EALENYDKVILLNPSYSSAYINKADIFCKLKKYPKAIDCSNQALAIVTDDDAAYYNKGLA 631
Query: 629 YHAIGEYREAV 639
+ +Y E +
Sbjct: 632 LIKLQQYEEGI 642
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 84/213 (39%), Gaps = 34/213 (15%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + E AI F + + +P A+ + A L EA++ L A++ P +
Sbjct: 21 EEKYETAIKYFDKVLNQDPFLSSAYSNKAFALKQLCRIEEALEVLDTAIKINPKISGYYD 80
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RGIV + A++ +KLD + + G L++ G+Y+KA KAI+LD
Sbjct: 81 NRGIVLSILGLYEEAIKSYDQALKLDSLDVLTFINKGWTLNNWGKYRKALSVLDKAIELD 140
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ KAY + + L LG+ + +
Sbjct: 141 PTDI----------------------------------KAYANKAISLEKLGKFDEMVHM 166
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ L I+P+ E + RA IGE +A+I
Sbjct: 167 YNKALEINPNYSELYFDRAKALIDIGEKEKALI 199
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 38/224 (16%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
KY +AI+ F+++++ +G+ A + E A++ +
Sbjct: 462 AKYKNAINYFNKVIE---------LGKAEAYTYY---EIALASYN--------------- 494
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADI----LHERGIVNFKFKDFNAAVEDLSACV 510
L AI + KA+E + D+ +G + K++ AA+E + +
Sbjct: 495 -------LKRYKTAIINYDKAIELGIKALDLKVSTYSTKGDCLYNIKNYEAALESYNKVI 547
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+LD N Y L ++ Y++A E + K I L+ ++ A+ + + L KA
Sbjct: 548 ELDPANYVHYYDKAYTLDNLKRYEEALENYDKVILLNPSYSSAYINKADIFCKLKKYPKA 607
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
++C Q L I AY+ +GL L L Q+++ I++L + +
Sbjct: 608 IDCSNQALAIVTDDDAAYYNKGLALIKLQQYEEGIENLDKSIKL 651
>gi|425452168|ref|ZP_18831986.1| exported hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389766142|emb|CCI08140.1| exported hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 695
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 404 FDQIL-KEDPMYPEA---LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
FD L KE+ P + GRG AR + ++ + +ISD+ EAI+ NP A++ R AR
Sbjct: 489 FDVTLTKENIAVPRSASIYFGRGNARYYLKDYKESISDYNEAIKRNPKYAAAYRERADAR 548
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNF-KFKDFNAAVEDLSACVKLDKENKS 518
LGE EAI+DL++A+ P A RG ++ +FK + A++D + + D + +
Sbjct: 549 DELGEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRR 608
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY GL +G+ + A H + I+L ++ A+ + Y+DL KALE ++
Sbjct: 609 AYFERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKK 666
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ GI++ N G Y AI+ ++++L+ P +A + RG A Q + +AAI+D TE I+
Sbjct: 243 LTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKL 302
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG AR ++ A++D S A+ +P + + RG V + ++ A+
Sbjct: 303 NPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
D + ++LD + AY G A S+ +Y+ A + +A+ NFLE G Q+
Sbjct: 363 DYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL----NFLEYSGLGFQY 414
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
R+ + +VD L RGIA + + KY +AI+ +++K +P A RG AR +
Sbjct: 261 AYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPNNSRAYFWRGLARDYS 320
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ D++ AI+ +P A+ RG A LGE +AI D ++A+ +P+
Sbjct: 321 EDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYEN 380
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL 512
RG + KD+ A+ D + +
Sbjct: 381 RGDARYSLKDYQGAISDYTQALNF 404
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%)
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G ++A G EAI ++ L+ PN+ D +RGI + + AA+ D++ +KL+
Sbjct: 246 GISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPN 305
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N AY + GLA + + A E + AI+LD + A+ + Y +L +KA+
Sbjct: 306 NSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYT 365
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ + +D AY RG + L ++ AI D + L
Sbjct: 366 EAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL 402
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L+ G ++A E AI+ + +Q +P+ +A+ +RG A + AI D+++
Sbjct: 240 EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEV 299
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN++ RG+ +D A+ED S ++LD E AY G + +GEY+K
Sbjct: 300 IKLNPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQK 359
Query: 536 AEEAHLKAIQLDRNFLEAW 554
A + +AI+LD + A+
Sbjct: 360 AILDYTEAIRLDPDVFLAY 378
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ +S S+ F RG A+ Y +IS +++ +K +P Y A R AR E +
Sbjct: 498 IAVPRSASIYF--GRGNARYYLKDYKESISDYNEAIKRNPKYAAAYRERADARDELGEHQ 555
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSADILHERGI 491
AI D +AI NP A+ RG + ++ EA++D ++A+ +P ERG+
Sbjct: 556 EAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRRAYFERGL 615
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++ + D A+ D + ++L + +AY GL+ +GE KA E KA +L
Sbjct: 616 IHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAEL 670
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P SA I RG + KD+ ++ D + +K + + +AY A +GE+++A +
Sbjct: 501 PRSASIYFGRGNARYYLKDYKESISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKD 560
Query: 540 HLKAIQLDRN-----FLEAWGHLTQF--YQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+AI L+ FL W H +F YQ+ AL+ Q + D ++ +AY RG
Sbjct: 561 LNQAISLNPKDARAYFLRGWIHSNRFKAYQE------ALKDYNQAILNDPQYRRAYFERG 614
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L+ LG ++ AI D + + + P Y R Y +GE +A+
Sbjct: 615 LIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKAL 661
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 42/289 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y AI + + ++ DP A RG AR ++ + AISD+T+A+
Sbjct: 346 NRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQALNFL 405
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--NSADILHERGIVNFKFKDFNAAV 503
+G ++ R R G+ + ++K E P IL + I N +
Sbjct: 406 EYSGLGFQYR---RHESGQGL----IITKIFENSPAFKQGLILDDLIIAINGKSTLNKSA 458
Query: 504 EDLSAC--------------------------VKLDKEN----KSAYTYLGL--ALSSIG 531
EDL V L KEN +SA Y G A +
Sbjct: 459 EDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAVPRSASIYFGRGNARYYLK 518
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+YK++ + +AI+ + + A+ +L ++A++ L Q + ++ + ++AY LR
Sbjct: 519 DYKESISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKDLNQAISLNPKDARAYFLR 578
Query: 592 GLL-LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G + + +++A+KD + + DP + R + +G+ R A+
Sbjct: 579 GWIHSNRFKAYQEALKDYNQAILNDPQYRRAYFERGLIHRELGDNRGAI 627
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 63/118 (53%)
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG++ ++ G Y++A A+ + +Q+ N ++A+ Y + + A+ + +V+ ++
Sbjct: 245 LGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNP 304
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
S+AY RGL ++ A++D S + +DP R + Y +GEY++A++
Sbjct: 305 NNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWK 453
G++ AI +Q + +P A RG + + + + A+ D+ +AI ++P A+
Sbjct: 552 GEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRRAYF 611
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG LG++ AI D ++ + P+ A+ + RG+ + A+ED +L
Sbjct: 612 ERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAELY 671
Query: 514 KE 515
K+
Sbjct: 672 KQ 673
>gi|300868980|ref|ZP_07113584.1| hypothetical protein OSCI_3880037 [Oscillatoria sp. PCC 6506]
gi|300333047|emb|CBN58776.1| hypothetical protein OSCI_3880037 [Oscillatoria sp. PCC 6506]
Length = 725
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 1/248 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG Q G AI+ +++ ++ P A RG A E AI+ F +A
Sbjct: 7 DAWFNRGYLQYERGDLEGAIASYNKAIEFKPDDDVAWYNRGGALKKLGRNEEAIACFDQA 66
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ P +AW RG LG EAI +A++F+PN + + RG FK + F
Sbjct: 67 IKFQPGCHQAWNNRGLVLYELGRIEEAIASYKQAIKFKPNFHEAWNNRGFALFKLERFEE 126
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ + + +++ + G+AL+ G + A + +A+ + +F +AW +
Sbjct: 127 AIACFDEALVIKRDDHKVWNNRGIALAHFGNLEAALASFDQALAIKSDFYQAWNNRGILL 186
Query: 562 QD-LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
D L E+AL Q + + A++ RG+ L L + AI L I P
Sbjct: 187 CDQLGQYEEALASFDQAIKFKPDYHDAWYNRGIALGHLEDFEGAINSFDKALAIKPDYYS 246
Query: 621 CLYLRASC 628
L L +
Sbjct: 247 SLSLEKTA 254
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 58/132 (43%)
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
AD RG + ++ D A+ + ++ ++ A+ G AL +G ++A +
Sbjct: 6 ADAWFNRGYLQYERGDLEGAIASYNKAIEFKPDDDVAWYNRGGALKKLGRNEEAIACFDQ 65
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI+ +AW + +L E+A+ +Q + F +A++ RG L L + +
Sbjct: 66 AIKFQPGCHQAWNNRGLVLYELGRIEEAIASYKQAIKFKPNFHEAWNNRGFALFKLERFE 125
Query: 603 KAIKDLSSGLGI 614
+AI L I
Sbjct: 126 EAIACFDEALVI 137
>gi|313203959|ref|YP_004042616.1| hypothetical protein Palpr_1485 [Paludibacter propionicigenes WB4]
gi|312443275|gb|ADQ79631.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
propionicigenes WB4]
Length = 591
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP + RG A + + E A D ++AI+ N + A+ R + GE+ +A
Sbjct: 28 DPYNSFGYLQRGGAYFQEDQFEKAFEDASKAIELNSNNAYAYNLRARVFVKRGENEKAEV 87
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
+ KA++ +PN + + RG+ K A+ED V+L + Y G+A + +
Sbjct: 88 EFKKAIDLDPNYVNAYNARGVFFTDLKQCEKAIEDFDKAVELKPNSAYIYNNRGIAWTKL 147
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
E +KA + + ++LD N++ + + + L +KAL+ + + +D F+ AY
Sbjct: 148 DEDEKAMVDYNRTLELDSNYVFTYNNRGNLWLKLGEIDKALKDYNKAIELDSNFANAYRN 207
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGID 615
RG+L +G + AI++ + +D
Sbjct: 208 RGILYFKIGNYDNAIENFQKAISLD 232
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 5/227 (2%)
Query: 363 KRNKKFCVTRISKSKSISVD----F-RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
++NK + KSIS+D F L RG A E ++ A + ++ + A
Sbjct: 9 RKNKDLQKAFLLAEKSISIDPYNSFGYLQRGGAYFQEDQFEKAFEDASKAIELNSNNAYA 68
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
R + E E A +F +AI +P+ A+ RG L + +AI+D KA+E
Sbjct: 69 YNLRARVFVKRGENEKAEVEFKKAIDLDPNYVNAYNARGVFFTDLKQCEKAIEDFDKAVE 128
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+PNSA I + RGI K + A+ D + ++LD Y G +GE KA
Sbjct: 129 LKPNSAYIYNNRGIAWTKLDEDEKAMVDYNRTLELDSNYVFTYNNRGNLWLKLGEIDKAL 188
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
+ + KAI+LD NF A+ + Y + N + A+E Q+ + +D+ F
Sbjct: 189 KDYNKAIELDSNFANAYRNRGILYFKIGNYDNAIENFQKAISLDEGF 235
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%)
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
K++ +P ++ +RG F+ F A ED S ++L+ N AY GE
Sbjct: 23 KSISIDPYNSFGYLQRGGAYFQEDQFEKAFEDASKAIELNSNNAYAYNLRARVFVKRGEN 82
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+KAE KAI LD N++ A+ F+ DL EKA+E + + + + Y+ RG+
Sbjct: 83 EKAEVEFKKAIDLDPNYVNAYNARGVFFTDLKQCEKAIEDFDKAVELKPNSAYIYNNRGI 142
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + +KA+ D + L +D + + R + + +GE +A+
Sbjct: 143 AWTKLDEDEKAMVDYNRTLELDSNYVFTYNNRGNLWLKLGEIDKAL 188
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + + AI FD+ ++ P RG A E E A+ D+ ++ +
Sbjct: 105 ARGVFFTDLKQCEKAIEDFDKAVELKPNSAYIYNNRGIAWTKLDEDEKAMVDYNRTLELD 164
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + RG LGE +A++D +KA+E + N A+ RGI+ FK +++ A+E+
Sbjct: 165 SNYVFTYNNRGNLWLKLGEIDKALKDYNKAIELDSNFANAYRNRGILYFKIGNYDNAIEN 224
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
+ LD+ K + LA I E ++ E++++
Sbjct: 225 FQKAISLDEGFKFLEDKIKLAQEKINEQRQFNESNVE 261
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%)
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
GI K KD A + +D N Y G A +++KA E KAI+L+ N
Sbjct: 5 GIFERKNKDLQKAFLLAEKSISIDPYNSFGYLQRGGAYFQEDQFEKAFEDASKAIELNSN 64
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + + +EKA ++ + +D + AY+ RG+ L Q +KAI+D
Sbjct: 65 NAYAYNLRARVFVKRGENEKAEVEFKKAIDLDPNYVNAYNARGVFFTDLKQCEKAIEDFD 124
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ + P++ R + + E +A++
Sbjct: 125 KAVELKPNSAYIYNNRGIAWTKLDEDEKAMV 155
>gi|410671866|ref|YP_006924237.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
gi|409170994|gb|AFV24869.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
Length = 368
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 120/245 (48%), Gaps = 22/245 (8%)
Query: 390 AQVNEG-------KYASAISIFDQILKEDPMYPEALIGRG-----------TARAFQREL 431
A VN+G +Y A + + + ++ DP + EA G+G +A F++ +
Sbjct: 94 AWVNKGDSLLEIYEYDEADACYGRAIEADPEFDEAWSGKGITLYLNGSYNESAEFFEKSI 153
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E + + I S+P + EAW +G + + +G + E+++ KA+E P A+ +G
Sbjct: 154 EYS----DKKITSDPDSFEAWYNKGISFSYIGRTNESLECYEKAIELNPEYANAWRGKGY 209
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ ++ A++ ++++ E+ A+ G L Y +A + KAI++
Sbjct: 210 ELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYDEAIKCFDKAIEIHPEDA 269
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
AWG+ L ++A+EC +V+ ID F+ A+ +G L+ LG++ +AI+ +
Sbjct: 270 YAWGNKGYMLGILERYDEAIECYDKVIEIDPEFTSAWKEKGYALYKLGRYDEAIQCYDNA 329
Query: 612 LGIDP 616
+ I+P
Sbjct: 330 IEINP 334
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 386 SRGIAQVNEGKYASAISIF-------DQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+GI G Y + F D+ + DP EA +G + ++ ++ +
Sbjct: 131 GKGITLYLNGSYNESAEFFEKSIEYSDKKITSDPDSFEAWYNKGISFSYIGRTNESLECY 190
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+AI+ NP AW+ +G LG EAIQ A+E P A +G V +KF
Sbjct: 191 EKAIELNPEYANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDR 250
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
++ A++ +++ E+ A+ G L + Y +A E + K I++D F AW
Sbjct: 251 YDEAIKCFDKAIEIHPEDAYAWGNKGYMLGILERYDEAIECYDKVIEIDPEFTSAWKEKG 310
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
L ++A++C + I+ ++ A+ +G L+ LG+ +A
Sbjct: 311 YALYKLGRYDEAIQCYDNAIEINPEYADAWEGKGDALNELGRSDEA 356
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 7/229 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ D I +DP Y +AL +G + AI + E I+ +P +AW +G
Sbjct: 40 YYEAIASVDNIQVDDPYYIDALNYKGESLYALSRYNEAIGCYNEVIEMDPENSKAWVNKG 99
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL---- 512
+ + E EA +A+E +P + +GI + +N + E ++
Sbjct: 100 DSLLEIYEYDEADACYGRAIEADPEFDEAWSGKGITLYLNGSYNESAEFFEKSIEYSDKK 159
Query: 513 ---DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
D ++ A+ G++ S IG ++ E + KAI+L+ + AW +L ++
Sbjct: 160 ITSDPDSFEAWYNKGISFSYIGRTNESLECYEKAIELNPEYANAWRGKGYELIELGRYDE 219
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
A++C + I+ + A+ +G +L+ ++ +AIK + I P +
Sbjct: 220 AIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYDEAIKCFDKAIEIHPED 268
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 115/251 (45%), Gaps = 7/251 (2%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI ++++++ DP +A + +G + E + A + + AI+++P EAW +
Sbjct: 73 RYNEAIGCYNEVIEMDPENSKAWVNKGDSLLEIYEYDEADACYGRAIEADPEFDEAWSGK 132
Query: 456 GQARAALGESVEAIQDLSKALEF-------EPNSADILHERGIVNFKFKDFNAAVEDLSA 508
G G E+ + K++E+ +P+S + + +GI N ++E
Sbjct: 133 GITLYLNGSYNESAEFFEKSIEYSDKKITSDPDSFEAWYNKGISFSYIGRTNESLECYEK 192
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++L+ E +A+ G L +G Y +A + + AI+++ AW +
Sbjct: 193 AIELNPEYANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYD 252
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
+A++C + + I + A+ +G +L L ++ +AI+ + IDP +
Sbjct: 253 EAIKCFDKAIEIHPEDAYAWGNKGYMLGILERYDEAIECYDKVIEIDPEFTSAWKEKGYA 312
Query: 629 YHAIGEYREAV 639
+ +G Y EA+
Sbjct: 313 LYKLGRYDEAI 323
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 92/197 (46%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S + ++GI+ G+ ++ +++ ++ +P Y A G+G + AI +
Sbjct: 166 SFEAWYNKGISFSYIGRTNESLECYEKAIELNPEYANAWRGKGYELIELGRYDEAIQCYD 225
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AI+ NP AW +G EAI+ KA+E P A +G + + +
Sbjct: 226 NAIEINPEDAYAWVGKGYVLYKFDRYDEAIKCFDKAIEIHPEDAYAWGNKGYMLGILERY 285
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ A+E +++D E SA+ G AL +G Y +A + + AI+++ + +AW
Sbjct: 286 DEAIECYDKVIEIDPEFTSAWKEKGYALYKLGRYDEAIQCYDNAIEINPEYADAWEGKGD 345
Query: 560 FYQDLANSEKALECLQQ 576
+L S++A EC ++
Sbjct: 346 ALNELGRSDEANECYKK 362
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+G + G+Y AI +D ++ +P A +G+G + AI F +AI+ +
Sbjct: 206 GKGYELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYDEAIKCFDKAIEIH 265
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G L EAI+ K +E +P E+G +K ++ A++
Sbjct: 266 PEDAYAWGNKGYMLGILERYDEAIECYDKVIEIDPEFTSAWKEKGYALYKLGRYDEAIQC 325
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++++ E A+ G AL+ +G +A E + KA +L
Sbjct: 326 YDNAIEINPEYADAWEGKGDALNELGRSDEANECYKKAEKL 366
>gi|158334579|ref|YP_001515751.1| hypothetical protein AM1_1406 [Acaryochloris marina MBIC11017]
gi|158304820|gb|ABW26437.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 783
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P+ALI R RA +L+ A+ DF EAI NP+ A+ RG +LG+ AI D S+
Sbjct: 30 PDALINRANKRATNGDLDGALGDFDEAIALNPAKATAYFNRGFLFNSLGKFEAAIHDFSE 89
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+E P+ + +RG + +F A++D S ++++ AY + + +G++
Sbjct: 90 AIELLPDYDEAYFQRGNSYRQRGEFQRAIQDYSQAIRINPYCIKAYYKRADSRAELGDHP 149
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
A + I A+ F EKA+E + + R + AY RG
Sbjct: 150 GALTDFSQVILRLPKDANAYCQRGIFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYC 209
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L +G+ +KA KD S L DP N + Y RA +A+G +E +
Sbjct: 210 LAQMGEAEKASKDFSEALLHDP-NHQAAYTRA---YALGMLKETPV 251
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 2/218 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + A++ F Q++ P A RG + ELE AI DFT AI+ NP +A+
Sbjct: 146 GDHPGALTDFSQVILRLPKDANAYCQRGIFLSQSGELEKAIEDFTSAIEHNPRLADAYFH 205
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A +GE+ +A +D S+AL +PN + R K+ V S+ D
Sbjct: 206 RGYCLAQMGEAEKASKDFSEALLHDPNH-QAAYTRAYALGMLKETPVDVSSPSSTAT-DY 263
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +++ + + +E H + L+ +E + + + A+
Sbjct: 264 PLSLLEESVPVSVEPVEDSDGEQEPHPATVPLEPTSMEGFFERANNRIQRGDLDGAISDY 323
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+++ D S+AY+ RG L LG+ + A++DL+ +
Sbjct: 324 SKIIDTDPENSQAYYQRGQSLGALGESQAAMEDLNQAI 361
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 100/255 (39%), Gaps = 36/255 (14%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI G+ AI F ++ +P +A RG A E E A DF+EA+ +P
Sbjct: 172 RGIFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYCLAQMGEAEKASKDFSEALLHDP 231
Query: 447 SAGEAWKRRGQARAALGE--------------------------SVEAIQDL-------S 473
+ A+ R A L E SVE ++D
Sbjct: 232 NHQAAYTR-AYALGMLKETPVDVSSPSSTATDYPLSLLEESVPVSVEPVEDSDGEQEPHP 290
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+ EP S + ER + D + A+ D S + D EN AY G +L ++GE
Sbjct: 291 ATVPLEPTSMEGFFERANNRIQRGDLDGAISDYSKIIDTDPENSQAYYQRGQSLGALGES 350
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ A E +AI R + + G + F +L+ + + L+ + L F+K + L G
Sbjct: 351 QAAMEDLNQAIHWAR--VHSLGLMRDFSGELSTTLETLKQDLKELSYQSPFAKTHPLPGT 408
Query: 594 LLHGLGQHKKAIKDL 608
+ Q + D+
Sbjct: 409 AADQMQQADPSADDV 423
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ + ++++P+ +A RG +RA +L+ AI D++ I+ +P EA+ +R +
Sbjct: 511 AIAQHTRAIEQNPLDADAFFNRGQSRALGGDLQGAIEDYSRTIRLDPHNREAYVKRARCL 570
Query: 460 AALGESVEAIQDLSKALEFEP 480
+ALG+ A DL+ + P
Sbjct: 571 SALGDETAAQADLNHVIRQSP 591
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
LE AI+ T AI+ NP +A+ RGQ+RA G+ AI+D S+ + +P++ + +R
Sbjct: 508 LERAIAQHTRAIEQNPLDADAFFNRGQSRALGGDLQGAIEDYSRTIRLDPHNREAYVKRA 567
Query: 491 IVNFKFKDFNAAVEDLSACVK 511
D AA DL+ ++
Sbjct: 568 RCLSALGDETAAQADLNHVIR 588
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI ++A+E P AD RG D A+ED S ++LD N+ AY L
Sbjct: 511 AIAQHTRAIEQNPLDADAFFNRGQSRALGGDLQGAIEDYSRTIRLDPHNREAYVKRARCL 570
Query: 528 SSIGEYKKAE 537
S++G+ A+
Sbjct: 571 SALGDETAAQ 580
>gi|125975162|ref|YP_001039072.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|256003175|ref|ZP_05428167.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281418417|ref|ZP_06249436.1| peptidase S41 [Clostridium thermocellum JW20]
gi|385777647|ref|YP_005686812.1| peptidase S41 [Clostridium thermocellum DSM 1313]
gi|419722800|ref|ZP_14249937.1| peptidase S41 [Clostridium thermocellum AD2]
gi|419726301|ref|ZP_14253324.1| peptidase S41 [Clostridium thermocellum YS]
gi|125715387|gb|ABN53879.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|255992866|gb|EEU02956.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281407501|gb|EFB37760.1| peptidase S41 [Clostridium thermocellum JW20]
gi|316939327|gb|ADU73361.1| peptidase S41 [Clostridium thermocellum DSM 1313]
gi|380770353|gb|EIC04250.1| peptidase S41 [Clostridium thermocellum YS]
gi|380781180|gb|EIC10841.1| peptidase S41 [Clostridium thermocellum AD2]
Length = 745
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 134/265 (50%), Gaps = 8/265 (3%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+ + S + + GKY AI +D++++ D A +G+G A + E A+ F
Sbjct: 24 VKTNIYFSAAESAFDSGKYEDAIKYYDKVIEADSGNAMAYLGKGLALDALGKYEEALEFF 83
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-NSA---DILHERGIVNF 494
+AI+ N +A+ +G A+L E++++ KA E +P NSA D+ + G+ N
Sbjct: 84 DKAIEINKDLAKAYNAKGTTLASLERYEESLENFKKAAELKPKNSAYQNDVAY--GLNN- 140
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
F A++ +KL+ + AY+ G AL ++G+ +A E + KAI+L + A+
Sbjct: 141 -LGRFEEAIQYAEKALKLNPRSGVAYSNKGFALDALGKLDEAIECYDKAIELSPTYTNAY 199
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + + +E+A+E L +VL ID A +G L+ LG+++KAI+ + +
Sbjct: 200 YNKSIAVFKMGKTEEAIELLDKVLEIDPDDLDAITSKGYCLNELGKYEKAIECFDTAIEK 259
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
P + +A+ + +G+Y A+
Sbjct: 260 YPKDPYPYVCKATSLYYLGKYDNAL 284
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 12/242 (4%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
N G++ AI ++ LK +P A +G A +L+ AI + +AI+ +P+ A+
Sbjct: 140 NLGRFEEAIQYAEKALKLNPRSGVAYSNKGFALDALGKLDEAIECYDKAIELSPTYTNAY 199
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ A +G++ EAI+ L K LE +P+ D + +G + + A+E +
Sbjct: 200 YNKSIAVFKMGKTEEAIELLDKVLEIDPDDLDAITSKGYCLNELGKYEKAIECFDTAI-- 257
Query: 513 DKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+K K Y Y+ +L +G+Y A E KAI+L+ F +++ + + + E+A
Sbjct: 258 EKYPKDPYPYVCKATSLYYLGKYDNALEECNKAIKLEYTFPDSYIWKAKILVEKGDIEEA 317
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS-------NIECLY 623
+ + L I + S Y ++G + + +AIK + +DPS I CLY
Sbjct: 318 RKSCDEFLAIAEDAS-VYDMKGQIYLHEYNYPEAIKLFDKAIEVDPSYEDSYINKIYCLY 376
Query: 624 LR 625
L+
Sbjct: 377 LQ 378
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G ++E Y AI +FD+ ++ DP Y ++ I + Q+ + I T+ P
Sbjct: 337 KGQIYLHEYNYPEAIKLFDKAIEVDPSYEDSYINKIYCLYLQKNYKECIEFATKVQTIFP 396
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
++ + G + + E +AI+ L KA E P IL + +D+ A E
Sbjct: 397 NSADIPWYIGDCYSIMMEPEKAIEYLKKAHELNPKDVGILTSIAWEYYSLEDYAKASE 454
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++ IA GK AI + D++L+ DP +A+ +G + E AI F AI+
Sbjct: 201 NKSIAVFKMGKTEEAIELLDKVLEIDPDDLDAITSKGYCLNELGKYEKAIECFDTAIEKY 260
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFE---PNS----ADILHERG 490
P + + + LG+ A+++ +KA++ E P+S A IL E+G
Sbjct: 261 PKDPYPYVCKATSLYYLGKYDNALEECNKAIKLEYTFPDSYIWKAKILVEKG 312
>gi|428220978|ref|YP_007105148.1| hypothetical protein Syn7502_00890 [Synechococcus sp. PCC 7502]
gi|427994318|gb|AFY73013.1| tetratricopeptide repeat protein [Synechococcus sp. PCC 7502]
Length = 246
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + G Y AI+ +D+ + +P + A RG A+ + + AI+D+ +A NP
Sbjct: 30 RGTVKARSGDYQGAIADYDKAISINPDFAVAFYNRGLAKYYLGNYQGAIADYDKATSINP 89
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A RG A+ LG+ AI D KA+ P+ A+ + RGI D+ A+ D
Sbjct: 90 DYASAIFNRGTAKDNLGDYQGAIADYDKAIGINPDYANAFYNRGIAKDNLGDYQGAIADY 149
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ ++ +A+ GLA +G Y+ A + KAI ++ N+ +
Sbjct: 150 DKVISINPNYANAFYNRGLAKYYLGNYQGAVADYDKAISINPNYAHVF 197
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 4/201 (1%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP +A RGT +A + + AI+D+ +AI NP A+ RG A+ LG AI
Sbjct: 20 DPTDAQAFSDRGTVKARSGDYQGAIADYDKAISINPDFAVAFYNRGLAKYYLGNYQGAIA 79
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D KA P+ A + RG D+ A+ D + ++ + +A+ G+A ++
Sbjct: 80 DYDKATSINPDYASAIFNRGTAKDNLGDYQGAIADYDKAIGINPDYANAFYNRGIAKDNL 139
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
G+Y+ A + K I ++ N+ A+ + L ++Y L N + A+ + + I+ ++ +
Sbjct: 140 GDYQGAIADYDKVISINPNYANAFYNRGLAKYY--LGNYQGAVADYDKAISINPNYAHVF 197
Query: 589 HLRGLLLHGLGQHKKAIKDLS 609
R + G AIKD++
Sbjct: 198 FNRSIAKLKSGDKNGAIKDIT 218
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 365 NKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + K+ SI+ D+ +RG A+ N G Y AI+ +D+ + +P Y A R
Sbjct: 73 NYQGAIADYDKATSINPDYASAIFNRGTAKDNLGDYQGAIADYDKAIGINPDYANAFYNR 132
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G A+ + + AI+D+ + I NP+ A+ RG A+ LG A+ D KA+ PN
Sbjct: 133 GIAKDNLGDYQGAIADYDKVISINPNYANAFYNRGLAKYYLGNYQGAVADYDKAISINPN 192
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKL 512
A + R I K D N A++D++ V+L
Sbjct: 193 YAHVFFNRSIAKLKSGDKNGAIKDITISVEL 223
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ SI+ DF ++ RG+A+ G Y AI+ +D+ +P Y A+ RGTA+
Sbjct: 43 AIADYDKAISINPDFAVAFYNRGLAKYYLGNYQGAIADYDKATSINPDYASAIFNRGTAK 102
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AI+D+ +AI NP A+ RG A+ LG+ AI D K + PN A+
Sbjct: 103 DNLGDYQGAIADYDKAIGINPDYANAFYNRGIAKDNLGDYQGAIADYDKVISINPNYANA 162
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLD 513
+ RG+ + ++ AV D + ++
Sbjct: 163 FYNRGLAKYYLGNYQGAVADYDKAISIN 190
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
MY LI + + + QR+L+ P+ +A+ RG +A G+ AI D
Sbjct: 1 MYAGQLIQKDSEQLVQRDLD-------------PTDAQAFSDRGTVKARSGDYQGAIADY 47
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
KA+ P+ A + RG+ + ++ A+ D ++ + SA G A ++G+
Sbjct: 48 DKAISINPDFAVAFYNRGLAKYYLGNYQGAIADYDKATSINPDYASAIFNRGTAKDNLGD 107
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y+ A + KAI ++ ++ A+ + +L + + A+ +V+ I+ ++ A++ RG
Sbjct: 108 YQGAIADYDKAIGINPDYANAFYNRGIAKDNLGDYQGAIADYDKVISINPNYANAFYNRG 167
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
L + LG ++ A+ D + I+P+ + R+
Sbjct: 168 LAKYYLGNYQGAVADYDKAISINPNYAHVFFNRS 201
>gi|255036666|ref|YP_003087287.1| hypothetical protein Dfer_2907 [Dyadobacter fermentans DSM 18053]
gi|254949422|gb|ACT94122.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM
18053]
Length = 471
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 4/232 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI--GRGTARAFQRELEAAISDFTEAI 442
+RG+A+ N Y A+ +D+ ++ +P EAL RG +++ Q + +AI D+++AI
Sbjct: 88 FNRGLAKANLKDYRGAMGDYDRAIELNP--KEALYYQSRGVSKSLQDDYRSAIDDYSKAI 145
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ NP +A+ RG + A L A+ DL AL P+ L+ RG +++ +
Sbjct: 146 ELNPEEPKAYYNRGVSYAKLKNHRNALVDLDHALSLNPDELAALYARGNCKQDLQEYAGS 205
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + ++L + AY GLA +G+Y+ A +AI+L N E + +
Sbjct: 206 LADFTRVIELSPKRTGAYAGRGLAKLELGDYQGAAADFTRAIELSPNDSEYYNNRGLAKT 265
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
L + + A+ + + +D AY+ RG L + AI DLS + +
Sbjct: 266 KLEDFQGAILDYDKTIQLDAENYNAYYGRGFAKGKLNDPRGAIADLSKAIEV 317
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 42/289 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG++ + +A+ D L +P AL RG + +E +++DFT I+ +
Sbjct: 157 NRGVSYAKLKNHRNALVDLDHALSLNPDELAALYARGNCKQDLQEYAGSLADFTRVIELS 216
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ LG+ A D ++A+E PN ++ + RG+ K +DF A+ D
Sbjct: 217 PKRTGAYAGRGLAKLELGDYQGAAADFTRAIELSPNDSEYYNNRGLAKTKLEDFQGAILD 276
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD EN +AY G A + + + A KAI++ + Y
Sbjct: 277 YDKTIQLDAENYNAYYGRGFAKGKLNDPRGAIADLSKAIEVKNAY--TGDPKKNAYIGKI 334
Query: 566 NSEKALECLQQV---LYIDK-------------------------------------RFS 585
N EK E QV + IDK +S
Sbjct: 335 NKEKLDELRDQVQTNIKIDKLTNERAEAYYARAIAKSKVGELKGALADLTIAVELSPTYS 394
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
AY R ++ G A+ D +S + + E YLR +++GE
Sbjct: 395 NAYFSRAMIRSAAGDQMGAVLDFTSSIKLRSDYPEAYYLRGIVKNSLGE 443
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 106/262 (40%), Gaps = 38/262 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + +YA +++ F ++++ P A GRG A+ + + A +DFT AI+ +
Sbjct: 191 ARGNCKQDLQEYAGSLADFTRVIELSPKRTGAYAGRGLAKLELGDYQGAAADFTRAIELS 250
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ E + RG A+ L + AI D K ++ + + + + RG K D A+ D
Sbjct: 251 PNDSEYYNNRGLAKTKLEDFQGAILDYDKTIQLDAENYNAYYGRGFAKGKLNDPRGAIAD 310
Query: 506 LSACV--------------------------------------KLDKENKSAYTYLGLAL 527
LS + KL E AY +A
Sbjct: 311 LSKAIEVKNAYTGDPKKNAYIGKINKEKLDELRDQVQTNIKIDKLTNERAEAYYARAIAK 370
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
S +GE K A A++L + A+ + A+ + + + +A
Sbjct: 371 SKVGELKGALADLTIAVELSPTYSNAYFSRAMIRSAAGDQMGAVLDFTSSIKLRSDYPEA 430
Query: 588 YHLRGLLLHGLGQHKKAIKDLS 609
Y+LRG++ + LG+ DLS
Sbjct: 431 YYLRGIVKNSLGEINDGCLDLS 452
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
F SA E G DFN A++ + + ++ ++ +Y GLA +++ +Y+ A
Sbjct: 45 FAQRSAAEYFEDGNTKAGTGDFNGAMQAYTTVISMNPDHAPSYFNRGLAKANLKDYRGAM 104
Query: 538 EAHLKAIQLDRN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+ +AI+L+ + ++ G +++ QD + A++ + + ++ KAY+ RG+
Sbjct: 105 GDYDRAIELNPKEALYYQSRG-VSKSLQD--DYRSAIDDYSKAIELNPEEPKAYYNRGVS 161
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
L H+ A+ DL L ++P + LY R +C + EY
Sbjct: 162 YAKLKNHRNALVDLDHALSLNPDELAALYARGNCKQDLQEY 202
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA R A++ EL+ A++D T A++ +P+ A+ R R+A G+ + A+ D + +
Sbjct: 361 EAYYARAIAKSKVGELKGALADLTIAVELSPTYSNAYFSRAMIRSAAGDQMGAVLDFTSS 420
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
++ + + + RGIV + N DLS +L + AY +G
Sbjct: 421 IKLRSDYPEAYYLRGIVKNSLGEINDGCLDLSKAGELGYQ--QAYKVIG 467
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R IA+ G+ A++ ++ P Y A R R+ + A+ DFT +I+
Sbjct: 365 ARAIAKSKVGELKGALADLTIAVELSPTYSNAYFSRAMIRSAAGDQMGAVLDFTSSIKLR 424
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
EA+ RG + +LGE + DLSKA E
Sbjct: 425 SDYPEAYYLRGIVKNSLGEINDGCLDLSKAGEL 457
>gi|427716097|ref|YP_007064091.1| hypothetical protein Cal7507_0771 [Calothrix sp. PCC 7507]
gi|427348533|gb|AFY31257.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 420
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 14/238 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + + YA AI F Q L+ P +PEA + RG A + A+SD+TE ++ N
Sbjct: 7 NRGLEKAKQKDYAGAIEEFSQALQLTPYFPEAYLQRGLAYYDSGAIHQAVSDYTEVLRLN 66
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EA+ R AR AL A++D+ + + PN A + RGIV K + A+ +
Sbjct: 67 PEFVEAYYSRALARVALKNLPGALEDVDRTIRLNPNYAAAYNLRGIVRRKQGHIHDAIAN 126
Query: 506 LSACVKL-----DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-HLTQ 559
+L DKEN L L SI E + E+ ++ + + + TQ
Sbjct: 127 FKKAAELYLVQKDKEN------CRLCLESIKELQPPEKPAVQQASSPSVTIRSTNEYFTQ 180
Query: 560 FYQ--DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ ++++A+ L VL D + ++AY RG++ +G +++AI D + L ++
Sbjct: 181 LLDKAEKGDTQEAIADLNWVLQADPKDAQAYCCRGVVRCKMGSYREAIADFNQALHLN 238
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 89/176 (50%), Gaps = 5/176 (2%)
Query: 373 ISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
+ ++ S SV R ++ + + +G AI+ + +L+ DP +A RG R
Sbjct: 161 VQQASSPSVTIRSTNEYFTQLLDKAEKGDTQEAIADLNWVLQADPKDAQAYCCRGVVRCK 220
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
AI+DF +A+ N ++ RG+AR+ LG+ AI D ++AL+ +P A +
Sbjct: 221 MGSYREAIADFNQALHLNFQDAIVYRNRGKARSFLGDHQGAIADFNQALQIQPQDALVYV 280
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
RG + ++ +A++D + ++++ + AY G+ + + E ++A E + +A
Sbjct: 281 ARGNAHRAGGNYLSAIQDYTKALQINAHDAQAYYNRGITYTLLEEMQQAVEDYQRA 336
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 117/296 (39%), Gaps = 46/296 (15%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+A + G A+S + ++L+ +P + EA R AR + L A+ D I+
Sbjct: 40 LQRGLAYYDSGAIHQAVSDYTEVLRLNPEFVEAYYSRALARVALKNLPGALEDVDRTIRL 99
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKAL--------------------EFEPNSAD 484
NP+ A+ RG R G +AI + KA E +P
Sbjct: 100 NPNYAAAYNLRGIVRRKQGHIHDAIANFKKAAELYLVQKDKENCRLCLESIKELQPPEKP 159
Query: 485 ILHERGIVNFKFK----------------DFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ + + + D A+ DL+ ++ D ++ AY G+
Sbjct: 160 AVQQASSPSVTIRSTNEYFTQLLDKAEKGDTQEAIADLNWVLQADPKDAQAYCCRGVVRC 219
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAW-----GHLTQFYQDLANSEKALECLQQVLYIDKR 583
+G Y++A +A+ L NF +A G F L + + A+ Q L I +
Sbjct: 220 KMGSYREAIADFNQALHL--NFQDAIVYRNRGKARSF---LGDHQGAIADFNQALQIQPQ 274
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ Y RG G + AI+D + L I+ + + Y R Y + E ++AV
Sbjct: 275 DALVYVARGNAHRAGGNYLSAIQDYTKALQINAHDAQAYYNRGITYTLLEEMQQAV 330
>gi|189184738|ref|YP_001938523.1| TPR repeat-containing protein 01_10 [Orientia tsutsugamushi str.
Ikeda]
gi|189181509|dbj|BAG41289.1| TPR repeat-containing protein 01_10 [Orientia tsutsugamushi str.
Ikeda]
Length = 379
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK AI++ + +K P + EA I +G + E A+ +F AI+ N S EA+
Sbjct: 122 GKNEEAITLCNLAIKYKPNFSEAYINKGASLNDLGRYEEAMENFDVAIRYNSSYPEAYYN 181
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG EAI+ A+++ PN ++ H +G+ F A+E +K D
Sbjct: 182 KGIALMNLGSIQEAIESCDIAIKYRPNYSEAYHNKGLTLAILGQFQNAIEHFDLAIKYDP 241
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY G L+ + Y +A E+ AI++D N +A+ ++ L ++A++
Sbjct: 242 NDLKAYNNKGYVLNLLKRYAEAMESCNLAIEIDPNCADAYCLKGMVFEKLGKHQEAIKNY 301
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ + F K Y +G+ L LGQ+ A ++ + +P+ I
Sbjct: 302 DIAIKYNPNFDKNYLEKGISLVNLGQYSSAKENFLLAIKYNPNII 346
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+GIA + GK A+ F+ +K DP + A + + + E AI+ AI+
Sbjct: 79 SKGIALDDLGKPLEAVENFNLAIKYDPSFVGAYNNKAMSYRKLGKNEEAITLCNLAIKYK 138
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ +G + LG EA+++ A+ + + + + +GI A+E
Sbjct: 139 PNFSEAYINKGASLNDLGRYEEAMENFDVAIRYNSSYPEAYYNKGIALMNLGSIQEAIES 198
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K AY GL L+ +G+++ A E AI+ D N L+A+ + L
Sbjct: 199 CDIAIKYRPNYSEAYHNKGLTLAILGQFQNAIEHFDLAIKYDPNDLKAYNNKGYVLNLLK 258
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+A+E + ID + AY L+G++ LG+H++AIK+ + +P+
Sbjct: 259 RYAEAMESCNLAIEIDPNCADAYCLKGMVFEKLGKHQEAIKNYDIAIKYNPN 310
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 123/245 (50%), Gaps = 2/245 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKR 454
KY AI FD +K DP Y + +G A + LEA + +F AI+ +PS A+
Sbjct: 55 KYQEAIENFDIAIKYDPSYASSYNSKGIALDDLGKPLEA-VENFNLAIKYDPSFVGAYNN 113
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ + LG++ EAI + A++++PN ++ +G + A+E+ ++ +
Sbjct: 114 KAMSYRKLGKNEEAITLCNLAIKYKPNFSEAYINKGASLNDLGRYEEAMENFDVAIRYNS 173
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AY G+AL ++G ++A E+ AI+ N+ EA+ + L + A+E
Sbjct: 174 SYPEAYYNKGIALMNLGSIQEAIESCDIAIKYRPNYSEAYHNKGLTLAILGQFQNAIEHF 233
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ D KAY+ +G +L+ L ++ +A++ + + IDP+ + L+ + +G+
Sbjct: 234 DLAIKYDPNDLKAYNNKGYVLNLLKRYAEAMESCNLAIEIDPNCADAYCLKGMVFEKLGK 293
Query: 635 YREAV 639
++EA+
Sbjct: 294 HQEAI 298
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 107/211 (50%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + AI +F AI+ +PS ++ +G A LG+ +EA+++ + A++++P+ +
Sbjct: 54 KKYQEAIENFDIAIKYDPSYASSYNSKGIALDDLGKPLEAVENFNLAIKYDPSFVGAYNN 113
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ + K A+ + +K AY G +L+ +G Y++A E AI+ +
Sbjct: 114 KAMSYRKLGKNEEAITLCNLAIKYKPNFSEAYINKGASLNDLGRYEEAMENFDVAIRYNS 173
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++ EA+ + +L + ++A+E + +S+AYH +GL L LGQ + AI+
Sbjct: 174 SYPEAYYNKGIALMNLGSIQEAIESCDIAIKYRPNYSEAYHNKGLTLAILGQFQNAIEHF 233
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ DP++++ + + + Y EA+
Sbjct: 234 DLAIKYDPNDLKAYNNKGYVLNLLKRYAEAM 264
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA +N G AI D +K P Y EA +G A + + AI F AI+ +
Sbjct: 181 NKGIALMNLGSIQEAIESCDIAIKYRPNYSEAYHNKGLTLAILGQFQNAIEHFDLAIKYD 240
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +A+ +G L EA++ + A+E +PN AD +G+V K A+++
Sbjct: 241 PNDLKAYNNKGYVLNLLKRYAEAMESCNLAIEIDPNCADAYCLKGMVFEKLGKHQEAIKN 300
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+K + Y G++L ++G+Y A+E L AI+ + N +
Sbjct: 301 YDIAIKYNPNFDKNYLEKGISLVNLGQYSSAKENFLLAIKYNPNII 346
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 4/172 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+++G + + G+Y A+ FD ++ + YPEA +G A ++ AI AI+
Sbjct: 146 INKGASLNDLGRYEEAMENFDVAIRYNSSYPEAYYNKGIALMNLGSIQEAIESCDIAIKY 205
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ EA+ +G A LG+ AI+ A++++PN + +G V K + A+E
Sbjct: 206 RPNYSEAYHNKGLTLAILGQFQNAIEHFDLAIKYDPNDLKAYNNKGYVLNLLKRYAEAME 265
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ----LDRNFLE 552
+ +++D AY G+ +G++++A + + AI+ D+N+LE
Sbjct: 266 SCNLAIEIDPNCADAYCLKGMVFEKLGKHQEAIKNYDIAIKYNPNFDKNYLE 317
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDI---CNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
L L + AI D LA Y+ D+ N+ + + L+ + + C+ A+++DP
Sbjct: 220 LAILGQFQNAIEHFD--LAIKYDPNDLKAYNNKGYVLNLLKRYAEAMESCNLAIEIDPNC 277
Query: 103 LQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADL-KQFLE 145
AY LKG F LG+ +EA+ K Y+ A+ + + K +LE
Sbjct: 278 ADAYCLKGMVFEKLGKHQEAI----KNYDIAIKYNPNFDKNYLE 317
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITAR-IEL----AKLCSLRNWSKAIRILDSLLAQS 66
+L K + I D ++ D AS+ ++ I L L ++ N++ AI+ D +
Sbjct: 52 KLKKYQEAIENFDIAIKYDPSYASSYNSKGIALDDLGKPLEAVENFNLAIK-YDPSFVGA 110
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y N+A Y +L ++ I C+ A++ P +AYI KG + + LGR EEA+ +
Sbjct: 111 YN-----NKAMSYRKLGKNEEAITLCNLAIKYKPNFSEAYINKGASLNDLGRYEEAMENF 165
Query: 127 E 127
+
Sbjct: 166 D 166
>gi|149176894|ref|ZP_01855504.1| TPR repeat [Planctomyces maris DSM 8797]
gi|148844331|gb|EDL58684.1| TPR repeat [Planctomyces maris DSM 8797]
Length = 485
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 105/215 (48%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E RG Q +L + + T AI+ NP + RG A A L + AI DL+KA
Sbjct: 82 EEFFLRGLEFQKQGKLAESTQELTMAIKLNPQVSRYYFHRGSAWADLKQDASAIVDLTKA 141
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+E +P +A + R + AV+D + ++ ++ A GL ++ G+ K+
Sbjct: 142 IEMDPKNAQYYYTRALFFMTRGGAELAVKDFTKAIECKPDSLQALNNRGLLFATTGKLKQ 201
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + +++ + ++A +L +L ++KALE L +VL ++ ++ AY RGL+
Sbjct: 202 ARADFERVLEIKPDSIDAMNNLGFALMNLNETDKALEVLNRVLQLNPKYLNAYDNRGLVW 261
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
++ KAI D + + + P++++ R + Y
Sbjct: 262 QRRKEYDKAIADFTKAIELSPNSLKFYRQRMTVYQ 296
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 13/266 (4%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +GK A + +K +P RG+A A ++ +AI D T+AI+ +P
Sbjct: 87 RGLEFQKQGKLAESTQELTMAIKLNPQVSRYYFHRGSAWADLKQDASAIVDLTKAIEMDP 146
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + R G + A++D +KA+E +P+S L+ RG++ A D
Sbjct: 147 KNAQYYYTRALFFMTRGGAELAVKDFTKAIECKPDSLQALNNRGLLFATTGKLKQARADF 206
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++ ++ A LG AL ++ E KA E + +QL+ +L A+ + +Q
Sbjct: 207 ERVLEIKPDSIDAMNNLGFALMNLNETDKALEVLNRVLQLNPKYLNAYDNRGLVWQRRKE 266
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD------------LSSGLGI 614
+KA+ + + + K Y R + Q +K D L+ L
Sbjct: 267 YDKAIADFTKAIELSPNSLKFYRQRMTVYQLAEQPEKQKADEEKIIWLQKLAGLNERLAK 326
Query: 615 DPSNIECLYLRASCYHAIGEYREAVI 640
P + E + RA Y A E RE +
Sbjct: 327 TPDDTELILERAQFYLA-SEMREKAM 351
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 121/258 (46%), Gaps = 13/258 (5%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R+ + K S+D + G A +N + A+ + +++L+ +P Y A RG ++E
Sbjct: 208 RVLEIKPDSIDAMNNLGFALMNLNETDKALEVLNRVLQLNPKYLNAYDNRGLVWQRRKEY 267
Query: 432 EAAISDFTEAIQSNPSAGEAWKRR---------GQARAALGESVEAIQDLS---KALEFE 479
+ AI+DFT+AI+ +P++ + +++R + + A E + +Q L+ + L
Sbjct: 268 DKAIADFTKAIELSPNSLKFYRQRMTVYQLAEQPEKQKADEEKIIWLQKLAGLNERLAKT 327
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P+ +++ ER + A++D + V+L ++ Y G + + +
Sbjct: 328 PDDTELILERAQFYLASEMREKAMKDYAKIVELTQDTGRGYYIRGALYLEENKLDRCIQE 387
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+AI++ EA+ + + E AL ++ ID+ +KAY +R G
Sbjct: 388 CSRAIKIQPQ-PEAYSVRGDAFMKQGDVEHALRDFERAKRIDEIVAKAYLMRSKSYKEQG 446
Query: 600 QHKKAIKDLSSGLGIDPS 617
+HKKA +D + IDPS
Sbjct: 447 EHKKAAQDYERAVAIDPS 464
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 121/281 (43%), Gaps = 18/281 (6%)
Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D + +R + + G A+ F + ++ P +AL RG A +
Sbjct: 139 TKAIEMDPKNAQYYYTRALFFMTRGGAELAVKDFTKAIECKPDSLQALNNRGLLFATTGK 198
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L+ A +DF ++ P + +A G A L E+ +A++ L++ L+ P + RG
Sbjct: 199 LKQARADFERVLEIKPDSIDAMNNLGFALMNLNETDKALEVLNRVLQLNPKYLNAYDNRG 258
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY--TYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+V + K+++ A+ D + ++L + Y L+ E +KA+E + +Q
Sbjct: 259 LVWQRRKEYDKAIADFTKAIELSPNSLKFYRQRMTVYQLAEQPEKQKADEEKIIWLQKLA 318
Query: 549 NFLEAWGHLT----------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
E QFY EKA++ +++ + + + Y++RG L
Sbjct: 319 GLNERLAKTPDDTELILERAQFYLASEMREKAMKDYAKIVELTQDTGRGYYIRGALYLEE 378
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + I++ S + I P E +R + G+ A+
Sbjct: 379 NKLDRCIQECSRAIKIQPQP-EAYSVRGDAFMKQGDVEHAL 418
>gi|255014061|ref|ZP_05286187.1| TPR repeat-containing protein [Bacteroides sp. 2_1_7]
gi|410101707|ref|ZP_11296635.1| hypothetical protein HMPREF0999_00407 [Parabacteroides sp. D25]
gi|409239505|gb|EKN32289.1| hypothetical protein HMPREF0999_00407 [Parabacteroides sp. D25]
Length = 707
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ IS I+ D L+ G + Y +I F+Q++K P E R A+
Sbjct: 12 IFTISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLD 71
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L
Sbjct: 72 DFKGAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNM 131
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + KD+N A + + + Y G G+ KA + KAI++D
Sbjct: 132 AVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPY 191
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+G+ + + + + AL L + L +D R S Y RGL+ + + + A+ D
Sbjct: 192 YAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYD 251
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +D N+ + R +G+ A+
Sbjct: 252 QVISMDSRNLIARFNRGLLRFQVGDNNRAI 281
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 118/251 (47%), Gaps = 4/251 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KY AI + + L+ P + L+ A +++ A F + + ++
Sbjct: 96 ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++++A+ D +KA+E +P A R I++++ D+ A+ D
Sbjct: 156 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGH-LTQFYQD 563
L+ ++LD Y GL + + + A + + I +D RN + + L +F
Sbjct: 216 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRF--Q 273
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ ++ +A+E V+ + AY+ R LL G ++ A++D L P+ +
Sbjct: 274 VGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFV 333
Query: 624 LRASCYHAIGE 634
R+ +G+
Sbjct: 334 SRSEAKRKLGD 344
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALEF 478
+ I DLSKA E
Sbjct: 678 DVNRGIADLSKAGEL 692
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ +A + + Y A FD ++ P Y + RG + + A++D+ +AI+
Sbjct: 129 VNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEM 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ R + + +A+ DL++AL + + RG+V ++ D A+
Sbjct: 189 DPYYAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMA 248
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + +D N A GL +G+ +A E IQ
Sbjct: 249 DYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQ 289
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 76/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L G+Y+ A + + ++ FL +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 349 DRDYWAAIKMEEQAKNG 365
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA+ E E + D+ I+ NP A+ R R A + AI D ++A+E +P A+
Sbjct: 607 RAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAE 664
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+ D N + DLS +L
Sbjct: 665 AYYNRGLARLSQGDVNRGIADLSKAGEL 692
>gi|427419274|ref|ZP_18909457.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
gi|425761987|gb|EKV02840.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
Length = 510
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 9/281 (3%)
Query: 365 NKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N + + + + ++ DF L RG A +A+ ++Q + D Y A + R
Sbjct: 102 NDEAAIEEFNAAINLKPDFAPSYLFRGAAFARLENTEAALDNYNQAISIDANYSTAYLNR 161
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + A +DF I ++P + A+ G + G A++ L+ A++ +P+
Sbjct: 162 GILYYDLGRTDLATTDFERTIATDPESANAYIYLGLIASEQGNQQIALEYLNDAVQLDPS 221
Query: 482 SADILHERGIVNFKFKDFNA---AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+A RG+V FK N+ A+ D + ++LD +N + + G ++G+ ++A +
Sbjct: 222 NASAYFHRGLV---FKALNSPASAISDFTQSIELDDDNAATFINRGATYYTVGDTREALQ 278
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+AI +D N +EA+ + + A + A+ L QVL ++ + AY +RG +
Sbjct: 279 DFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLNQVLTLEPGNADAYLVRGQVFASS 338
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AI D S L + P + E Y R + Y GE + A+
Sbjct: 339 SNTADAINDFSKVLELSPDSAEAYYRRGNAYLEAGEQQAAI 379
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG G A+ F++ + D EA R A + +AAI+D + +
Sbjct: 261 INRGATYYTVGDTREALQDFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLNQVLTL 320
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P +A+ RGQ A+ + +AI D SK LE P+SA+ + RG + + AA+
Sbjct: 321 EPGNADAYLVRGQVFASSSNTADAINDFSKVLELSPDSAEAYYRRGNAYLEAGEQQAAIS 380
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D +A + LD E+ +Y Y G A + +G+ A + AI L+ + A+ + + +
Sbjct: 381 DYTAALALDPEHAPSYKYRGDAFADLGDSFSALSDYSTAINLNSAYWNAYASRGRMHYES 440
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + A V+ + + ++ RG+ +G + A+ DL
Sbjct: 441 GDYQSAYTDFSAVITANVLDADVFYYRGITNARMGNRRAAVTDL 484
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 5/264 (1%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++IS+D L+RGI + G+ A + F++ + DP A I G + Q
Sbjct: 145 NQAISIDANYSTAYLNRGILYYDLGRTDLATTDFERTIATDPESANAYIYLGLIASEQGN 204
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A+ +A+Q +PS A+ RG AL AI D ++++E + ++A RG
Sbjct: 205 QQIALEYLNDAVQLDPSNASAYFHRGLVFKALNSPASAISDFTQSIELDDDNAATFINRG 264
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ D A++D + + +D+ N AY AL S + A + + L+
Sbjct: 265 ATYYTVGDTREALQDFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLNQVLTLEPGN 324
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+A+ Q + +N+ A+ +VL + ++AY+ RG G+ + AI D ++
Sbjct: 325 ADAYLVRGQVFASSSNTADAINDFSKVLELSPDSAEAYYRRGNAYLEAGEQQAAISDYTA 384
Query: 611 GLGIDPSNIECLYLRASCYHAIGE 634
L +DP + R + +G+
Sbjct: 385 ALALDPEHAPSYKYRGDAFADLGD 408
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 116/246 (47%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R + G+ + +G +AI F+ + P + + + RG A A EAA+ ++ +AI
Sbjct: 90 RFNEGLEEYQDGNDEAAIEEFNAAINLKPDFAPSYLFRGAAFARLENTEAALDNYNQAIS 149
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+ + A+ RG LG + A D + + +P SA+ G++ + + A+
Sbjct: 150 IDANYSTAYLNRGILYYDLGRTDLATTDFERTIATDPESANAYIYLGLIASEQGNQQIAL 209
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
E L+ V+LD N SAY + GL ++ A ++I+LD + + + Y
Sbjct: 210 EYLNDAVQLDPSNASAYFHRGLVFKALNSPASAISDFTQSIELDDDNAATFINRGATYYT 269
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ ++ +AL+ + + ID+ +AY+ R L + + AI DL+ L ++P N +
Sbjct: 270 VGDTREALQDFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLNQVLTLEPGNADAYL 329
Query: 624 LRASCY 629
+R +
Sbjct: 330 VRGQVF 335
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 105/242 (43%)
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
ASAIS F Q ++ D I RG + A+ DF EAI + + EA+ R
Sbjct: 240 ASAISDFTQSIELDDDNAATFINRGATYYTVGDTREALQDFNEAIDIDENNVEAYYNRSF 299
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
A + AI DL++ L EP +AD RG V + A+ D S ++L ++
Sbjct: 300 ALISEARPQAAIADLNQVLTLEPGNADAYLVRGQVFASSSNTADAINDFSKVLELSPDSA 359
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
AY G A GE + A + A+ LD ++ + + DL +S AL
Sbjct: 360 EAYYRRGNAYLEAGEQQAAISDYTAALALDPEHAPSYKYRGDAFADLGDSFSALSDYSTA 419
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
+ ++ + AY RG + + G ++ A D S+ + + + + Y R +G R
Sbjct: 420 INLNSAYWNAYASRGRMHYESGDYQSAYTDFSAVITANVLDADVFYYRGITNARMGNRRA 479
Query: 638 AV 639
AV
Sbjct: 480 AV 481
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 13/195 (6%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAI 401
+ E + EA N+ F + ++ ++ D L RG + A AI
Sbjct: 286 IDENNVEAYYNRSFALISEARPQAAIADLNQVLTLEPGNADAYLVRGQVFASSSNTADAI 345
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+ F ++L+ P EA RG A E +AAISD+T A+ +P ++K RG A A
Sbjct: 346 NDFSKVLELSPDSAEAYYRRGNAYLEAGEQQAAISDYTAALALDPEHAPSYKYRGDAFAD 405
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG+S A+ D S A+ + RG ++++ D+ +A D SA + + + +
Sbjct: 406 LGDSFSALSDYSTAINLNSAYWNAYASRGRMHYESGDYQSAYTDFSAVITANVLDADVFY 465
Query: 522 YLGLALSSIGEYKKA 536
Y G+ + +G + A
Sbjct: 466 YRGITNARMGNRRAA 480
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 105/251 (41%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ +G A+ + ++ DP A RG +AISDFT++I+ +
Sbjct: 196 GLIASEQGNQQIALEYLNDAVQLDPSNASAYFHRGLVFKALNSPASAISDFTQSIELDDD 255
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ RG +G++ EA+QD ++A++ + N+ + + R AA+ DL+
Sbjct: 256 NAATFINRGATYYTVGDTREALQDFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLN 315
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L+ N AY G +S A K ++L + EA+ Y +
Sbjct: 316 QVLTLEPGNADAYLVRGQVFASSSNTADAINDFSKVLELSPDSAEAYYRRGNAYLEAGEQ 375
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+ A+ L +D + +Y RG LG A+ D S+ + ++ + R
Sbjct: 376 QAAISDYTAALALDPEHAPSYKYRGDAFADLGDSFSALSDYSTAINLNSAYWNAYASRGR 435
Query: 628 CYHAIGEYREA 638
++ G+Y+ A
Sbjct: 436 MHYESGDYQSA 446
>gi|428298012|ref|YP_007136318.1| hypothetical protein Cal6303_1286 [Calothrix sp. PCC 6303]
gi|428234556|gb|AFZ00346.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 839
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 129/266 (48%), Gaps = 2/266 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S SV+ L +G ++ G+ +A+ IF Q +P L G A + +I
Sbjct: 2 TQSSSVETLLEQGYDLLDRGQEQTALEIFQQAATLEPQNHRVLYALGLALYRLESYQNSI 61
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-NSADILHERGIVNF 494
T+A++ PS A RRG A L + EA D +A++ +P N D L RGI
Sbjct: 62 EYLTQALEIQPSYILALARRGMAYTKLDQVEEAKADFERAIQIQPINHEDYLG-RGIAFD 120
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ K + A+ D + + L ++ + Y G A +++ Y++A + +A+ L ++ A+
Sbjct: 121 ELKRYEEAIADFNQALILKPDDYNTYFNRGYAFNNLERYEEAIADYNQALILKPDYYNAY 180
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ +++L E+A+ Q L + AY RG + GL ++++AI + + L +
Sbjct: 181 FNRGITFRNLERYEEAIADYNQALILKPDDYDAYFNRGYVFDGLKRYEEAIANYNQALIL 240
Query: 615 DPSNIECLYLRASCYHAIGEYREAVI 640
P + E L RA + + Y EA++
Sbjct: 241 KPDSYEYLSKRACALNNLRRYEEAIL 266
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A Y ++I Q L+ P Y AL RG A ++E A +DF AIQ P
Sbjct: 48 GLALYRLESYQNSIEYLTQALEIQPSYILALARRGMAYTKLDQVEEAKADFERAIQIQPI 107
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E + RG A L EAI D ++AL +P+ + RG + + A+ D +
Sbjct: 108 NHEDYLGRGIAFDELKRYEEAIADFNQALILKPDDYNTYFNRGYAFNNLERYEEAIADYN 167
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L + +AY G+ ++ Y++A + +A+ L + +A+ + + L
Sbjct: 168 QALILKPDYYNAYFNRGITFRNLERYEEAIADYNQALILKPDDYDAYFNRGYVFDGLKRY 227
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E+A+ Q L + + R L+ L ++++AI D + L I + Y++A
Sbjct: 228 EEAIANYNQALILKPDSYEYLSKRACALNNLRRYEEAILDCNKALAIKTDDFYVYYVKAY 287
Query: 628 CYHAIG 633
YH G
Sbjct: 288 SYHWQG 293
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQ 443
+RG A N +Y AI+ ++Q L P Y A RG T R +R E AI+D+ +A+
Sbjct: 147 FNRGYAFNNLERYEEAIADYNQALILKPDYYNAYFNRGITFRNLER-YEEAIADYNQALI 205
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P +A+ RG L EAI + ++AL +P+S + L +R + + A+
Sbjct: 206 LKPDDYDAYFNRGYVFDGLKRYEEAIANYNQALILKPDSYEYLSKRACALNNLRRYEEAI 265
Query: 504 EDLSACVKLDKENKSAY 520
D + + + ++ Y
Sbjct: 266 LDCNKALAIKTDDFYVY 282
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
NR + ++ LE ++ I D ++AL L P AY +G F L R EEA++
Sbjct: 148 NRGYAFNNLERYEEAIADYNQALILKPDYYNAYFNRGITFRNLERYEEAIA 198
>gi|423332155|ref|ZP_17309939.1| hypothetical protein HMPREF1075_01952 [Parabacteroides distasonis
CL03T12C09]
gi|409229996|gb|EKN22868.1| hypothetical protein HMPREF1075_01952 [Parabacteroides distasonis
CL03T12C09]
Length = 707
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ IS I+ D L+ G + Y +I F+Q++K P E R A+
Sbjct: 12 IFTISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLD 71
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L
Sbjct: 72 DFKGAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNM 131
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + KD+N A + + + Y G G+ KA + KAI++D
Sbjct: 132 AVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPY 191
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+G+ + + + + AL L + L +D R S Y RGL+ + + + A+ D
Sbjct: 192 YAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYD 251
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +D N+ + R +G+ A+
Sbjct: 252 QVISMDSRNLIARFNRGLLRFQVGDNNRAI 281
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 118/251 (47%), Gaps = 4/251 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KY AI + + L+ P + L+ A +++ A F + + ++
Sbjct: 96 ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++++A+ D +KA+E +P A R I++++ D+ A+ D
Sbjct: 156 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGH-LTQFYQD 563
L+ ++LD Y GL + + + A + + I +D RN + + L +F
Sbjct: 216 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRF--Q 273
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ ++ +A+E V+ + AY+ R LL G ++ A++D L P+ +
Sbjct: 274 VGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFV 333
Query: 624 LRASCYHAIGE 634
R+ +G+
Sbjct: 334 SRSEAKRKLGD 344
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALEF 478
+ I DLSKA E
Sbjct: 678 DVNRGIADLSKAGEL 692
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ +A + + Y A FD ++ P Y + RG + + A++D+ +AI+
Sbjct: 129 VNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEM 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ R + + +A+ DL++AL + + RG+V ++ D A+
Sbjct: 189 DPYYAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMA 248
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + +D N A GL +G+ +A E IQ
Sbjct: 249 DYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQ 289
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 76/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L G+Y+ A + + ++ FL +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 349 DRDYWAAIKMEEQAKNG 365
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA+ E E + D+ I+ NP A+ R R A + AI D ++A+E +P A+
Sbjct: 607 RAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAE 664
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+ D N + DLS +L
Sbjct: 665 AYYNRGLARLSQGDVNRGIADLSKAGEL 692
>gi|150007314|ref|YP_001302057.1| hypothetical protein BDI_0659 [Parabacteroides distasonis ATCC
8503]
gi|149935738|gb|ABR42435.1| putative exported Tpr repeat-family protein [Parabacteroides
distasonis ATCC 8503]
Length = 707
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ IS I+ D L+ G + Y +I F+Q++K P E R A+
Sbjct: 12 IFTISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLD 71
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L
Sbjct: 72 DFKGAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNM 131
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + KD+N A + + + Y G G+ KA + KAI++D
Sbjct: 132 AVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPY 191
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+G+ + + + + AL L + L +D R S Y RGL+ + + + A+ D
Sbjct: 192 YAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYD 251
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +D N+ + R +G+ A+
Sbjct: 252 QVISMDSRNLIARFNRGLLRFQVGDNNRAI 281
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 118/251 (47%), Gaps = 4/251 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KY AI + + L+ P + L+ A +++ A F + + ++
Sbjct: 96 ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++++A+ D +KA+E +P A R I++++ D+ A+ D
Sbjct: 156 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGH-LTQFYQD 563
L+ ++LD Y GL + + + A + + I +D RN + + L +F
Sbjct: 216 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRF--Q 273
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ ++ +A+E V+ + AY+ R LL G ++ A++D L P+ +
Sbjct: 274 VGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFV 333
Query: 624 LRASCYHAIGE 634
R+ +G+
Sbjct: 334 SRSEAKRKLGD 344
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALEF 478
+ I DLSKA E
Sbjct: 678 DVNRGIADLSKAGEL 692
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 76/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L G+Y+ A + + ++ FL +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P + + + RA+ E E + D+ I+ NP A+ R R A + AI D ++
Sbjct: 597 PRSAMLKDNKRAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNE 654
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
A+E +P A+ + RG+ D N + DLS +L
Sbjct: 655 AIERDPEFAEAYYNRGLARLSQGDVNRGIADLSKAGEL 692
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 349 DRDYWAAIKMEEQAKNG 365
>gi|262382113|ref|ZP_06075251.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
gi|262297290|gb|EEY85220.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
Length = 707
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ IS I+ D L+ G + Y +I F+Q++K P E R A+
Sbjct: 12 IFTISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLD 71
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L
Sbjct: 72 DFKGAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNM 131
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + KD+N A + + + Y G G+ KA + KAI++D
Sbjct: 132 AVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPY 191
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+G+ + + + + AL L + L +D R S Y RGL+ + + + A+ D
Sbjct: 192 YAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYD 251
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +D N+ + R +G+ A+
Sbjct: 252 QVISMDSRNLIARFNRGLLRFQVGDNNRAI 281
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 117/251 (46%), Gaps = 4/251 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KY AI + + L+ P + L+ A +++ A F + + ++
Sbjct: 96 ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++++A+ D +KA+E +P A R I++++ D+ A+ D
Sbjct: 156 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGH-LTQFYQD 563
L+ ++LD Y GL + + + A + + I +D RN + + L +F
Sbjct: 216 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRF--Q 273
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ ++ +A+E V+ + AY+ R LL G + A++D L P+ +
Sbjct: 274 VGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYWGAVQDYDVVLKQYPTFLPGFV 333
Query: 624 LRASCYHAIGE 634
R+ +G+
Sbjct: 334 SRSEAKRKLGD 344
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALEF 478
+ I DLSKA E
Sbjct: 678 DVNRGIADLSKAGEL 692
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ +A + + Y A FD ++ P Y + RG + + A++D+ +AI+
Sbjct: 129 VNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEM 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ R + + +A+ DL++AL + + RG+V ++ D A+
Sbjct: 189 DPYYAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMA 248
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + +D N A GL +G+ +A E IQ
Sbjct: 249 DYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQ 289
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 75/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L G+Y A + + ++ FL +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYWGAVQDYDVVLKQYPTFLPGF 332
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYWGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 349 DRDYWAAIKMEEQAKNG 365
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA+ E E + D+ I+ NP A+ R R A + AI D ++A+E +P A+
Sbjct: 607 RAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAE 664
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+ D N + DLS +L
Sbjct: 665 AYYNRGLARLSQGDVNRGIADLSKAGEL 692
>gi|301310686|ref|ZP_07216625.1| TPR domain protein [Bacteroides sp. 20_3]
gi|423336937|ref|ZP_17314684.1| hypothetical protein HMPREF1059_00636 [Parabacteroides distasonis
CL09T03C24]
gi|300832260|gb|EFK62891.1| TPR domain protein [Bacteroides sp. 20_3]
gi|409239956|gb|EKN32739.1| hypothetical protein HMPREF1059_00636 [Parabacteroides distasonis
CL09T03C24]
Length = 707
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ IS I+ D L+ G + Y +I F+Q++K P E R A+
Sbjct: 12 IFTISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLD 71
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L
Sbjct: 72 DFKGAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNM 131
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + KD+N A + + + Y G G+ KA + KAI++D
Sbjct: 132 AVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPY 191
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+G+ + + + + AL L + L +D R S Y RGL+ + + + A+ D
Sbjct: 192 YAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYD 251
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +D N+ + R +G+ A+
Sbjct: 252 QVISMDSRNLIARFNRGLLRFQVGDNNRAI 281
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 118/251 (47%), Gaps = 4/251 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KY AI + + L+ P + L+ A +++ A F + + ++
Sbjct: 96 ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++++A+ D +KA+E +P A R I++++ D+ A+ D
Sbjct: 156 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGH-LTQFYQD 563
L+ ++LD Y GL + + + A + + I +D RN + + L +F
Sbjct: 216 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRF--Q 273
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ ++ +A+E V+ + AY+ R LL G ++ A++D L P+ +
Sbjct: 274 VGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFV 333
Query: 624 LRASCYHAIGE 634
R+ +G+
Sbjct: 334 SRSEAKRKLGD 344
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALEF 478
+ I DLSKA E
Sbjct: 678 DVNRGIADLSKAGEL 692
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ +A + + Y A FD ++ P Y + RG + + A++D+ +AI+
Sbjct: 129 VNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEM 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ R + + +A+ DL++AL + + RG+V ++ D A+
Sbjct: 189 DPYYAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMA 248
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + +D N A GL +G+ +A E IQ
Sbjct: 249 DYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQ 289
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 76/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L G+Y+ A + + ++ FL +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 349 DRDYWAAIKMEEQAKNG 365
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA+ E E + D+ I+ NP A+ R R A + AI D ++A+E +P A+
Sbjct: 607 RAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAE 664
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+ D N + DLS +L
Sbjct: 665 AYYNRGLARLSQGDVNRGIADLSKAGEL 692
>gi|425469644|ref|ZP_18848563.1| Mom72 protein [Microcystis aeruginosa PCC 9701]
gi|389880474|emb|CCI38768.1| Mom72 protein [Microcystis aeruginosa PCC 9701]
Length = 260
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG R + AI+DFT+A+Q P +A+ RG A LG+ AI
Sbjct: 30 NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL N + L R + K + AAVED + + L+ + Y G A +
Sbjct: 90 DYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149
Query: 531 GEYKKAEEAHLKAIQLD--RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
G + +A E + KA+ L R + Y E AL + L I+ F++AY
Sbjct: 150 GRHPEAIEDYTKALSLQGTRGQDRILYNRALAYNRAGQQEMALRDYDESLKINANFAEAY 209
Query: 589 HLRGLLLHGLGQHKKAIKDLSS 610
H RGL + LG +KAI DL +
Sbjct: 210 HNRGLTHYKLGNREKAIADLEA 231
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V+F +RG+ ++ G Y+ AI+ F Q L+ +P +A RG A + E AI+D+T
Sbjct: 34 AVEF-YNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIADYT 92
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+ N + A R A + A++D +KA+ N AD RG
Sbjct: 93 QALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLGRH 152
Query: 500 NAAVEDLSACVKLD---KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
A+ED + + L +++ Y LA + G+ + A + ++++++ NF EA+ +
Sbjct: 153 PEAIEDYTKALSLQGTRGQDRILYN-RALAYNRAGQQEMALRDYDESLKINANFAEAYHN 211
Query: 557 LTQFYQDLANSEKALECLQ 575
+ L N EKA+ L+
Sbjct: 212 RGLTHYKLGNREKAIADLE 230
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 2/176 (1%)
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
A+ + I LS P A + RG+ D++ A+ D + ++L+ ++ AY
Sbjct: 12 AIATFLLTISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAY 71
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G A +G+Y++A + +A+ ++ N++ A G+ Y E A+E + + +
Sbjct: 72 YNRGYAELVLGQYERAIADYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIAL 131
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGE 634
+ F+ + RG LG+H +AI+D + L + + + LY RA Y+ G+
Sbjct: 132 NGNFADFFIYRGNAKDDLGRHPEAIEDYTKALSLQGTRGQDRILYNRALAYNRAGQ 187
>gi|148284415|ref|YP_001248505.1| hypothetical protein OTBS_0721 [Orientia tsutsugamushi str.
Boryong]
gi|148284902|ref|YP_001248992.1| hypothetical protein OTBS_1666 [Orientia tsutsugamushi str.
Boryong]
gi|146739854|emb|CAM79787.1| tetratricopeptide repeat protein with 8 trp repeats [Orientia
tsutsugamushi str. Boryong]
gi|146740341|emb|CAM80761.1| tetratricopeptide repeat protein with 8 trp repeats [Orientia
tsutsugamushi str. Boryong]
Length = 324
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 2/222 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI++ + +K P + EA +G + A + E A+ +F AI+ EA+ +G A
Sbjct: 70 AITLCNLAIKYKPHFAEAYNNKGVSLAILGKYEDALENFDIAIKYRSDNPEAYYNKGIAL 129
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG EAI++ A+ + PN ++ H +G+ F A+E +K D + +A
Sbjct: 130 MYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKAIEHFDLAIKYDPNDATA 189
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G LS + Y +A E+ AI+ + N EA+ ++ L +KA+E +
Sbjct: 190 YCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFEKLGKHQKAIENFDIAIA 249
Query: 580 IDKR--FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
I + F++ Y +G+ L LGQ+ KA ++ + + +P+ I
Sbjct: 250 IKYKPNFAENYLEKGISLVSLGQYSKAKENFNLAIKYNPNII 291
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 3/213 (1%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K +S + + ++GIA + G AI +D ++ P Y EA +G AF + + A
Sbjct: 113 KYRSDNPEAYYNKGIALMYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKA 172
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I F AI+ +P+ A+ +G + L EAI+ + A+++ PN A+ + RG++
Sbjct: 173 IEHFDLAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFE 232
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
K A+E+ + + + A YL G++L S+G+Y KA+E AI+ + N +
Sbjct: 233 KLGKHQKAIENFDIAIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFNLAIKYNPNIIA 292
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
+ + + +L N E +Q L I K++S
Sbjct: 293 EYEAMFKKLTELENFTGVKE-YEQKLQILKKYS 324
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 106/210 (50%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E + AI ++ AI++ P EA+ +G + L + EAI + A++++P+ A+ + +
Sbjct: 32 EQKEAIENYNLAIKNKPDFAEAYNNKGASYGKLEKDKEAITLCNLAIKYKPHFAEAYNNK 91
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ + A+E+ +K +N AY G+AL +G ++A E + AI+ N
Sbjct: 92 GVSLAILGKYEDALENFDIAIKYRSDNPEAYYNKGIALMYLGYIQEAIENYDTAIRYRPN 151
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ EA+ + L +KA+E + D + AY +G +L L ++ +AI+ +
Sbjct: 152 YSEAYHNKGLTLAFLGQFQKAIEHFDLAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCN 211
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +P+ E Y R + +G++++A+
Sbjct: 212 LAIKYNPNCAEAYYRRGMIFEKLGKHQKAI 241
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQD---ICNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
L L + KAI D LA Y+ D CN+ + S L+ + I C+ A++ +P
Sbjct: 163 LAFLGQFQKAIEHFD--LAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNC 220
Query: 103 LQAYILKGCAFSALGRKEEAL 123
+AY +G F LG+ ++A+
Sbjct: 221 AEAYYRRGMIFEKLGKHQKAI 241
>gi|428309117|ref|YP_007120094.1| hypothetical protein Mic7113_0778 [Microcoleus sp. PCC 7113]
gi|428250729|gb|AFZ16688.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 1506
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 110/243 (45%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ F++ +K DP L GRG + A++D A+ +P A RG
Sbjct: 957 YEEAVDDFNKAIKIDPKNQYVLAGRGDTYQRMKRYTEAVADLNTALNIDPKYAFALGSRG 1016
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ +G+ +A+ D ++AL+ +P +L RG +++ A+ D + +KLD +
Sbjct: 1017 ETYRLMGDYDKALSDFNQALKLDPQYIFVLGSRGETYQSIGNYDKALVDFNQALKLDSKL 1076
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ + G +GEY KA AI L+ N+ A + Q Y+ AL Q
Sbjct: 1077 EWVFADRGETYRLMGEYTKALMDFNSAINLNPNYALAIANRGQIYKQQKRYNDALNDFNQ 1136
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ +D + R +G ++KA+ + + ++P N+ L R + YH + Y+
Sbjct: 1137 AIELDPQQHWIIPERIETYRLMGGYEKALTIFNQAINLNPKNVGALASRGATYHFMERYK 1196
Query: 637 EAV 639
EA+
Sbjct: 1197 EAL 1199
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG G Y A+S F+Q LK DP Y L RG + A+ DF +A++ +
Sbjct: 1014 SRGETYRLMGDYDKALSDFNQALKLDPQYIFVLGSRGETYQSIGNYDKALVDFNQALKLD 1073
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RG+ +GE +A+ D + A+ PN A + RG + + K +N A+ D
Sbjct: 1074 SKLEWVFADRGETYRLMGEYTKALMDFNSAINLNPNYALAIANRGQIYKQQKRYNDALND 1133
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD + +G Y+KA +AI L+ + A Y +
Sbjct: 1134 FNQAIELDPQQHWIIPERIETYRLMGGYEKALTIFNQAINLNPKNVGALASRGATYHFME 1193
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL + + +D + + A RG + + Q++KA+ DL+ + +DP++ + R
Sbjct: 1194 RYKEALGDFNRTIQLDSKNTFALGSRGQIYSQMEQYEKALADLNKAIELDPTSDWAIISR 1253
Query: 626 ASCYHAIGEYREAV 639
Y + Y EA+
Sbjct: 1254 GETYLELLRYEEAL 1267
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 17/252 (6%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y A++IF+Q + +P AL RG F + A+ DF IQ + A
Sbjct: 1159 GGYEKALTIFNQAINLNPKNVGALASRGATYHFMERYKEALGDFNRTIQLDSKNTFALGS 1218
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RGQ + + + +A+ DL+KA+E +P S + RG + + A+ D + ++L+
Sbjct: 1219 RGQIYSQMEQYEKALADLNKAIELDPTSDWAIISRGETYLELLRYEEALADFTRIMELNP 1278
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------------DRNFLEAWGHLTQFYQ 562
+N SA G A + Y KA +AI+L D + W Y+
Sbjct: 1279 KNVSALWGRGNAYREMERYDKALNDFNQAIKLGSDSKLDKLTMSDLIAQQGW-----LYR 1333
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+ E+AL + L ++ + A RG + + ++ +A+ + + L +D N +
Sbjct: 1334 QMGRYEEALANFKNTLELNPKQYLALEGRGEIYRYMRRYNEALDNFTFALELDTKNDWPI 1393
Query: 623 YLRASCYHAIGE 634
Y RA Y A+G+
Sbjct: 1394 YNRALVYLALGQ 1405
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L +G + + E A+ DF +AI+ +P RG + EA+ DL+ AL
Sbjct: 944 LASQGDSNRMIKHYEEAVDDFNKAIKIDPKNQYVLAGRGDTYQRMKRYTEAVADLNTALN 1003
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P A L RG D++ A+ D + +KLD + G SIG Y KA
Sbjct: 1004 IDPKYAFALGSRGETYRLMGDYDKALSDFNQALKLDPQYIFVLGSRGETYQSIGNYDKAL 1063
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+A++LD + + Y+ + KAL + ++ ++ A RG +
Sbjct: 1064 VDFNQALKLDSKLEWVFADRGETYRLMGEYTKALMDFNSAINLNPNYALAIANRGQIYKQ 1123
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ A+ D + + +DP + R Y +G Y +A+
Sbjct: 1124 QKRYNDALNDFNQAIELDPQQHWIIPERIETYRLMGGYEKAL 1165
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ- 443
+SRG + +Y A++ F +I++ +P AL GRG A + A++DF +AI+
Sbjct: 1251 ISRGETYLELLRYEEALADFTRIMELNPKNVSALWGRGNAYREMERYDKALNDFNQAIKL 1310
Query: 444 -----------SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
S+ A + W R +G EA+ + LE P L RG +
Sbjct: 1311 GSDSKLDKLTMSDLIAQQGWLYR-----QMGRYEEALANFKNTLELNPKQYLALEGRGEI 1365
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ +N A+++ + ++LD +N L ++G+ + + KAIQ
Sbjct: 1366 YRYMRRYNEALDNFTFALELDTKNDWPIYNRALVYLALGQKDQGQADLNKAIQ 1418
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%)
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
I Y++A + KAI++D YQ + +A+ L L ID +++ A
Sbjct: 954 IKHYEEAVDDFNKAIKIDPKNQYVLAGRGDTYQRMKRYTEAVADLNTALNIDPKYAFALG 1013
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
RG +G + KA+ D + L +DP I L R Y +IG Y +A++
Sbjct: 1014 SRGETYRLMGDYDKALSDFNQALKLDPQYIFVLGSRGETYQSIGNYDKALV 1064
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
+ +R YSQ+E ++ + D +KA++LDPT A I +G + L R EEAL+
Sbjct: 1216 LGSRGQIYSQMEQYEKALADLNKAIELDPTSDWAIISRGETYLELLRYEEALA 1268
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A++ F L+ +P AL GRG + R A+ +FT A++ +
Sbjct: 1336 GRYEEALANFKNTLELNPKQYLALEGRGEIYRYMRRYNEALDNFTFALELDTKNDWPIYN 1395
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK------FKDFNAAVEDLSA 508
R ALG+ + DL+KA++ SA +E+ N++ FN A+ L+A
Sbjct: 1396 RALVYLALGQKDQGQADLNKAIQ----SAQQRYEKDTQNWRNLGSQWRNGFNVAIYYLAA 1451
>gi|425444768|ref|ZP_18824811.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9443]
gi|389735431|emb|CCI01072.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9443]
Length = 707
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 124/246 (50%), Gaps = 3/246 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNP-SAGEAWK 453
+Y A++ +DQ LK +P Y EA G+ A A QR EA I + +AIQ NP SA AW
Sbjct: 347 RYTDALNYYDQALKINPDYLEAFQGKADALLALQRYSEALII-YEKAIQINPDSAWPAWL 405
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RGQA LG++ EA++ + L P ++ + + + + ++AA + L +
Sbjct: 406 GRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQ 465
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ + + G +L ++ +Y+ A +A+ +A+ ++ + W + L +ALE
Sbjct: 466 QNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSWYQLNKINEALES 525
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + +FS+A++ +G++L LG+ +A++ + + + + + H +
Sbjct: 526 YSKAGQFNPQFSQAHYSQGIILQKLGRKPEALEAFTQATKANSNYYQAWLNQGILLHQME 585
Query: 634 EYREAV 639
++EA+
Sbjct: 586 RFKEAI 591
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 14/255 (5%)
Query: 396 KYASAISIFDQILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+Y+ A+ I+++ ++ +P +P A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALIIYEKAIQINPDSAWP-AWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQ 439
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+ L + A + L K L F+ N A +++G +D+ AV+ + ++
Sbjct: 440 GKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIE 499
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKAL 571
+N + G + + + +A E++ KA Q + F +A H +Q Q L +AL
Sbjct: 500 SDNALIWYQKGNSWYQLNKINEALESYSKAGQFNPQFSQA--HYSQGIILQKLGRKPEAL 557
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL-------YL 624
E Q + + +A+ +G+LLH + + K+AI I E Y
Sbjct: 558 EAFTQATKANSNYYQAWLNQGILLHQMERFKEAIASYEKARRISSQKAEVFIGIGNAWYR 617
Query: 625 RASCYHAIGEYREAV 639
Y AI Y++A+
Sbjct: 618 LGDNYQAINAYQQAI 632
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 107/262 (40%), Gaps = 34/262 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ F+++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 465 QQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSWYQLNKINEALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L +G +A EA +A + + N+ +AW +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRKPEALEAFTQATKANSNYYQAWLNQGILLHQM 584
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + +A+ EKA + QQ + K + +
Sbjct: 585 ERFKEAIASYEKARRISSQKAEVFIGIGNAWYRLGDNYQAINAYQQAIQRQKDNPETWKS 644
Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
G LGQ+++AI+ L
Sbjct: 645 LGNSWFKLGQYERAIQAYQESL 666
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ + + + F T+ +K+
Sbjct: 516 LNKINEALESYSKAGQFNPQFSQAHYSQGII------LQKLGRKPEALEAF--TQATKAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++GI ++ AI+ +++ + E IG G A + AI+
Sbjct: 568 SNYYQAWLNQGILLHQMERFKEAIASYEKARRISSQKAEVFIGIGNAWYRLGDNYQAINA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDREVQAQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACVKLDKENK 517
+ ++++ + K+D E +
Sbjct: 688 ELQQSLQNQTP--KVDNEEQ 705
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 54/116 (46%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G + EAI KA A++ G
Sbjct: 556 ALEAFTQATKANSNYYQAWLNQGILLHQMERFKEAIASYEKARRISSQKAEVFIGIGNAW 615
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 616 YRLGDNYQAINAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSN 671
>gi|67459786|ref|YP_247410.1| hypothetical protein RF_1394 [Rickettsia felis URRWXCal2]
gi|67005319|gb|AAY62245.1| TPR [Rickettsia felis URRWXCal2]
Length = 273
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 123/244 (50%), Gaps = 21/244 (8%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G+ + G+Y +AI ++++ L+ +P Y E+ I +GTA + + E AI F +AI+
Sbjct: 34 FNKGVLLEDLGEYETAIKLYNKALELNPNYFESHINKGTALSSLKRYELAIDSFNKAIKI 93
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFK 497
A+ + A LG+ + AI+ + ++ E N A+IL E
Sbjct: 94 KFDHPTAYYNKAYILAKLGKYILAIKSYKEVIKLESSHFAAHYNLANILLE--------- 144
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
++ + +KL+ + +AY+ G+AL+ + +Y A E+ KAI+L+ N A+ +
Sbjct: 145 -----LKKYTQAIKLNPDYSTAYSNKGIALAKLKKYNLAIESFNKAIELNPNNSYAYLNK 199
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
LA E+ALE + + +D AY +GL L LG++ A++ + L ++P
Sbjct: 200 GNILCTLAKYEQALELYDKTIELDLNDYDAYFNKGLALEELGKYDLALESYNKALELEPD 259
Query: 618 NIEC 621
N+E
Sbjct: 260 NLEV 263
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 11 YRLNKTHKTICEIDELVRVDSVMASAITARIELAK-LCSLRNWSKAIRILDSLLAQSYEI 69
Y L K K I I V + +S A LA L L+ +++AI+ L+ + +Y
Sbjct: 106 YILAKLGKYILAIKSYKEVIKLESSHFAAHYNLANILLELKKYTQAIK-LNPDYSTAY-- 162
Query: 70 QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
N+ ++L+ + I +KA++L+P AY+ KG L + E+AL +++K
Sbjct: 163 ---SNKGIALAKLKKYNLAIESFNKAIELNPNNSYAYLNKGNILCTLAKYEQALELYDKT 219
Query: 130 YEHALH-QSADLKQFLELEEL 149
E L+ A + L LEEL
Sbjct: 220 IELDLNDYDAYFNKGLALEEL 240
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 67/142 (47%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
++ +E +K + + AY G+ L +GEY+ A + + KA++L+ N+ E+ +
Sbjct: 11 NYEKKLEKYDKAIKRNPNDAEAYFNKGVLLEDLGEYETAIKLYNKALELNPNYFESHINK 70
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
L E A++ + + I AY+ + +L LG++ AIK + ++ S
Sbjct: 71 GTALSSLKRYELAIDSFNKAIKIKFDHPTAYYNKAYILAKLGKYILAIKSYKEVIKLESS 130
Query: 618 NIECLYLRASCYHAIGEYREAV 639
+ Y A+ + +Y +A+
Sbjct: 131 HFAAHYNLANILLELKKYTQAI 152
>gi|445062771|ref|ZP_21375099.1| TPR domain-containing protein, partial [Brachyspira hampsonii
30599]
gi|444505847|gb|ELV06281.1| TPR domain-containing protein, partial [Brachyspira hampsonii
30599]
Length = 430
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 41/234 (17%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI DF +AI E + RG + L E EA++ ++KA+E + N + +ERG++
Sbjct: 138 AIEDFDKAISLYDGDSEFYYYRGLTSSYLNELDEALKYINKAIELDTNYINAYNERGLIY 197
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---- 549
++ D+++A++D ++LD EN A +L L+ ++ EY+ A + + + I+L+ N
Sbjct: 198 YRNSDYDSAIKDFKKVIELDNENVYANYHLALSYDALEEYETALKYYTRVIELEPNTPDA 257
Query: 550 ------------------------------FLEAWGHLTQFYQDLANSEKALECLQQVLY 579
++A+ ++ Y L + +KA+EC +V+
Sbjct: 258 FYNRALAEIEMELYHEAIEDFYKVIDIDSTIIDAYFNIGICYDSLKDYQKAVECYTKVIE 317
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
D AY+ RGL GL + +A +D L I+P A+ Y+ IG
Sbjct: 318 TDNYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPK-------YANAYNGIG 364
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 123/253 (48%), Gaps = 2/253 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + G Y AI+ + ++++ + + R A + E A+ D+ +AI+ NP
Sbjct: 24 GLLEYKLGNYKDAINYYTKMIEMNDDIYYSYYNRALAEESLQLYEEALEDYNKAIELNPE 83
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
++ RG + + EA++D +KA+E E N A + + R ++ + + A+ED
Sbjct: 84 DTYSYNNRGLIKNEMQMYDEALEDYNKAIELEKNDAYLYNNRALLKGRMHLYKEAIEDFD 143
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L + Y Y GL S + E +A + KAI+LD N++ A+ Y ++
Sbjct: 144 KAISLYDGDSEFYYYRGLTSSYLNELDEALKYINKAIELDTNYINAYNERGLIYYRNSDY 203
Query: 568 EKALECLQQVLYIDKRFSKA-YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ A++ ++V+ +D A YHL L L +++ A+K + + ++P+ + Y RA
Sbjct: 204 DSAIKDFKKVIELDNENVYANYHL-ALSYDALEEYETALKYYTRVIELEPNTPDAFYNRA 262
Query: 627 SCYHAIGEYREAV 639
+ Y EA+
Sbjct: 263 LAEIEMELYHEAI 275
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ Y SAI F ++++ D A + E E A+ +T I+ P
Sbjct: 193 RGLIYYRNSDYDSAIKDFKKVIELDNENVYANYHLALSYDALEEYETALKYYTRVIELEP 252
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ R A + EAI+D K ++ + D GI KD+ AVE
Sbjct: 253 NTPDAFYNRALAEIEMELYHEAIEDFYKVIDIDSTIIDAYFNIGICYDSLKDYQKAVECY 312
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ ++ D + AY GL+ + Y +A E +++A++++ + A+
Sbjct: 313 TKVIETDNYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPKYANAYN 361
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQI 407
L+ +D L+E K TR+ + + + D +R +A++ Y AI F ++
Sbjct: 227 LALSYDALEEYETALK-----YYTRVIELEPNTPDAFYNRALAEIEMELYHEAIEDFYKV 281
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
+ D +A G ++ + A+ +T+ I+++ + +A+ RG ++ L E
Sbjct: 282 IDIDSTIIDAYFNIGICYDSLKDYQKAVECYTKVIETDNYSIDAYYNRGLSKVGLKLYNE 341
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKF 496
A +D +ALE P A+ + G K+
Sbjct: 342 AYEDYIRALEINPKYANAYNGIGFSKTKY 370
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 85/173 (49%), Gaps = 2/173 (1%)
Query: 469 IQDLSKALEF--EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
+ D KALE+ E N I ++ G++ +K ++ A+ + ++++ + +Y LA
Sbjct: 1 MADYKKALEYADEDNIISIYNDMGLLEYKLGNYKDAINYYTKMIEMNDDIYYSYYNRALA 60
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
S+ Y++A E + KAI+L+ ++ + ++ ++ALE + + ++K +
Sbjct: 61 EESLQLYEEALEDYNKAIELNPEDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEKNDAY 120
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y+ R LL + +K+AI+D + + + E Y R + E EA+
Sbjct: 121 LYNNRALLKGRMHLYKEAIEDFDKAISLYDGDSEFYYYRGLTSSYLNELDEAL 173
>gi|256839603|ref|ZP_05545112.1| TPR repeat-containing protein [Parabacteroides sp. D13]
gi|256738533|gb|EEU51858.1| TPR repeat-containing protein [Parabacteroides sp. D13]
Length = 707
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ IS I+ D L+ G + Y +I F+Q++K P E R A+
Sbjct: 12 IFTISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLD 71
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + A D T +Q NP +A+ RG AR + + EAI D K LEF+P +L
Sbjct: 72 DFKGAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNM 131
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + KD+N A + + + Y G G+ KA + KAI++D
Sbjct: 132 AVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPY 191
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+G+ + + + + AL L + L +D R S Y RGL+ + + + A+ D
Sbjct: 192 YAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYD 251
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +D N+ + R +G+ A+
Sbjct: 252 QVISMDRRNLIARFNRGLLRFQVGDNNRAI 281
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 115/249 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KY AI + + L+ P + L+ A +++ A F + + ++
Sbjct: 96 ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++++A+ D +KA+E +P A R I++++ D+ A+ D
Sbjct: 156 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ ++LD Y GL + + + A + + I +DR L A + +
Sbjct: 216 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDRRNLIARFNRGLLRFQVG 275
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++ +A+E V+ + AY+ R LL G ++ A++D L P+ + R
Sbjct: 276 DNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSR 335
Query: 626 ASCYHAIGE 634
+ +G+
Sbjct: 336 SEAKRKLGD 344
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALEF 478
+ I DLSKA E
Sbjct: 678 DVNRGIADLSKAGEL 692
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ +A + + Y A FD ++ P Y + RG + + A++D+ +AI+
Sbjct: 129 VNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEM 188
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P A+ R + + +A+ DL++AL + + RG+V ++ D A+
Sbjct: 189 DPYYAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMA 248
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D + +D+ N A GL +G+ +A E IQ
Sbjct: 249 DYDQVISMDRRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQ 289
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 76/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDRRNLIARFNRGLLRFQVGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L G+Y+ A + + ++ FL +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDRRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 349 DRDYWAAIKMEEQAKNG 365
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA+ E E + D+ I+ NP A+ R R A + AI D ++A+E +P A+
Sbjct: 607 RAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAE 664
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+ D N + DLS +L
Sbjct: 665 AYYNRGLARLSQGDVNRGIADLSKAGEL 692
>gi|158339402|ref|YP_001520579.1| hypothetical protein AM1_6330 [Acaryochloris marina MBIC11017]
gi|158309643|gb|ABW31260.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 1346
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 16/264 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ ++G+Y A++ F+Q + DP P G+G Q++ + AI+ T+AI+ P
Sbjct: 761 GMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQYQDAIAAHTKAIELEPD 820
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + R + +AI DL+KA+ P + RG AA+ D S
Sbjct: 821 SANDYFSRANVYITTQQYQDAIADLTKAIRLAPPDPIYFNNRGDAYDALNQPEAALADYS 880
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---------DRNF----LEAW 554
+++DK N AY LG +Y++A KAI++ D+ + A
Sbjct: 881 QAIEVDKNNTRAYIGLGTVYQRARQYQRAIAQFDKAIEVADFPQKLETDKKYKGLAYSAR 940
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
G L Y DL E+A+ Q + + + + Y R L L ++++AI D + + I
Sbjct: 941 GFL---YSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNRYQEAIADYTQAIEI 997
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
P ++ R Y +G+ EA
Sbjct: 998 APKDLSTYIRRGKIYRTLGQETEA 1021
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 44/301 (14%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD----- 437
F ++RG + +Y ++ +Q ++ DP A RG +F + + AI+D
Sbjct: 688 FYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLKKAI 747
Query: 438 -----------------------------FTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
F + I +P + +G A + +A
Sbjct: 748 ALDSQYISAYGGLGMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQYQDA 807
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I +KA+E EP+SA+ R V + + A+ DL+ ++L + + G A
Sbjct: 808 IAAHTKAIELEPDSANDYFSRANVYITTQQYQDAIADLTKAIRLAPPDPIYFNNRGDAYD 867
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ-------DLANSEKALEC--LQQVLY 579
++ + + A + +AI++D+N A+ L YQ +A +KA+E Q L
Sbjct: 868 ALNQPEAALADYSQAIEVDKNNTRAYIGLGTVYQRARQYQRAIAQFDKAIEVADFPQKLE 927
Query: 580 IDKRFSK-AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
DK++ AY RG L LG+ ++AI D S + + P RA Y A+ Y+EA
Sbjct: 928 TDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNRYQEA 987
Query: 639 V 639
+
Sbjct: 988 I 988
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 34/278 (12%)
Query: 396 KYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+YA A++ FD+ ++ +P + A G+ Q AA + + + P+ WK
Sbjct: 565 QYAEALAAFDRAIQLNPSFVHLAWYGKALVYRSQENFPAAETALLKVLNLKPNYKPGWKV 624
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHE-------------------------- 488
A + +A+ ++ L+ P A +L+E
Sbjct: 625 LSAAYRLQKKPEQALTAVNSGLKIAPTDAQLLNEKYVVLSELYRYSEALAAIDAAIAQAP 684
Query: 489 -------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
RG V K + + L+ +++D AYT G+ S + K+A
Sbjct: 685 RAAFYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLK 744
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI LD ++ A+G L Y ++AL Q + ID + Y +G + Q+
Sbjct: 745 KAIALDSQYISAYGGLGMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQY 804
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI + + ++P + + RA+ Y +Y++A+
Sbjct: 805 QDAIAAHTKAIELEPDSANDYFSRANVYITTQQYQDAI 842
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 21/269 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + GK AI+ F Q ++ P R + AI+D+T+AI+
Sbjct: 939 ARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNRYQEAIADYTQAIEIA 998
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RRG+ LG+ EA D K L EP+ + R V K + A+ D
Sbjct: 999 PKDLSTYIRRGKIYRTLGQETEANADFQKVLTTEPSDSQGYGVRADVYKSLKRYPEALAD 1058
Query: 506 LSACVKLDKENKSAYTYLGLALSSI-GEYKKAEEAHL---KAIQLDRNFLEAWGHLTQFY 561
+ ++L +N + L + + + G ++ E+A+L KA+ L N F
Sbjct: 1059 YTKAIELAPQNPFQRSLLHSSRAQMHGNLQQYEQANLDYSKALALLPN------PTVPFA 1112
Query: 562 QDL-----------ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
DL + AL Q + I + AY RG L G +++ A+ D S+
Sbjct: 1113 ADLYIARGNNFLSWQRQDDALADFNQAIGISPKNVMAYVGRGRLSLGTQKYQDALADFST 1172
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++P R+ Y A+ +A+
Sbjct: 1173 VIKLNPKLGFVYDFRSRTYQALNRIEDAI 1201
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 35/256 (13%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
+ + + D ++RG ++ + A++ F+Q + P A +GRG ++ +
Sbjct: 1106 NPTVPFAADLYIARGNNFLSWQRQDDALADFNQAIGISPKNVMAYVGRGRLSLGTQKYQD 1165
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++DF+ I+ NP G + R + AL +AI D + +E + N+A RGI++
Sbjct: 1166 ALADFSTVIKLNPKLGFVYDFRSRTYQALNRIEDAIADADQWIERQANAAS-YTRRGILH 1224
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ + A+ D + L+ + LGL G K+A +AI+LD +
Sbjct: 1225 VLGANPSLALNDFQQAITLNPKAIIPTVNLGLIYYEQGNRKQAIAQFQRAIELDGS---- 1280
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
LA + AL L HG GQ K+AI S L
Sbjct: 1281 ----------LAEPQLALAT-------------------ALYHG-GQQKQAIALAQSALK 1310
Query: 614 IDPSNIECLYLRASCY 629
+DP E +L+ + +
Sbjct: 1311 LDPKFQEVAFLKQNLW 1326
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 17/265 (6%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAIQSN 445
R IAQ ++ A ++ F Q L+ D Y A RG + +LE AI+DF++AI+ +
Sbjct: 908 RAIAQFDK---AIEVADFPQKLETDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAIELS 964
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P ++ R AL EAI D ++A+E P RG + A D
Sbjct: 965 PKVTYLYRARALNYTALNRYQEAIADYTQAIEIAPKDLSTYIRRGKIYRTLGQETEANAD 1024
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------DRNFL-----EAW 554
+ + + Y S+ Y +A + KAI+L R+ L +
Sbjct: 1025 FQKVLTTEPSDSQGYGVRADVYKSLKRYPEALADYTKAIELAPQNPFQRSLLHSSRAQMH 1084
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
G+L Q+ Q + KAL L + Y RG + A+ D + +GI
Sbjct: 1085 GNLQQYEQANLDYSKALALLPNPTV--PFAADLYIARGNNFLSWQRQDDALADFNQAIGI 1142
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
P N+ R +Y++A+
Sbjct: 1143 SPKNVMAYVGRGRLSLGTQKYQDAL 1167
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 40/261 (15%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPS------AGEAWKRRGQARAALGESV--- 466
E I RG + A++ F AIQ NPS G+A R Q E+
Sbjct: 551 EVWIERGNQLWRLEQYAEALAAFDRAIQLNPSFVHLAWYGKALVYRSQENFPAAETALLK 610
Query: 467 --------------------------EAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
+A+ ++ L+ P A +L+E+ +V + ++
Sbjct: 611 VLNLKPNYKPGWKVLSAAYRLQKKPEQALTAVNSGLKIAPTDAQLLNEKYVVLSELYRYS 670
Query: 501 AAVEDLSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
E L+A + A Y+ G L + Y++ A +AI++D N A+ +
Sbjct: 671 ---EALAAIDAAIAQAPRAAFYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRG 727
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
Y L ++A+ L++ + +D ++ AY G+L H G++++A+ + G+ IDP N
Sbjct: 728 VTYSFLKRPKEAIADLKKAIALDSQYISAYGGLGMLYHSQGRYQEALAQFNQGIAIDPKN 787
Query: 619 IECLYLRASCYHAIGEYREAV 639
+ Y A +Y++A+
Sbjct: 788 PINYSGQGFVYFAQKQYQDAI 808
>gi|414077747|ref|YP_006997065.1| TPR repeat-containing serine and cysteine peptidase [Anabaena sp.
90]
gi|413971163|gb|AFW95252.1| TPR repeat-containing serine and cysteine peptidase [Anabaena sp.
90]
Length = 566
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 113/224 (50%), Gaps = 10/224 (4%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TR+S +S + DF +RGI ++++ Y ++ F+Q +K DP Y EA RG + R+
Sbjct: 275 TRLSNPQS-ARDF-YARGITKLDQYNYQESVEDFNQAIKLDPKYSEAYFKRGYVYTWLRK 332
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
A+ DF + I +P+ + + RG + +L + A++D ++A+ PN A +G
Sbjct: 333 YSEALVDFNQVIAIDPNYLDGYLNRGWTQISLQNNQAALEDFNRAMRLNPNYAITHAHQG 392
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ K ++ AA+E ++LD N Y+ +++ +Y+ A + AI +D +
Sbjct: 393 MAYLKLGNYEAALESSKQAIRLDPNNSYGYSIQANIFNALKDYQSAIKVSSTAILIDPDN 452
Query: 551 LEAWGH------LTQFYQD-LANSEKALECLQQVLYIDKRFSKA 587
A+ + LT YQ LA+ +K+ E + Y+ K S+
Sbjct: 453 FSAYTNRAIARTLTNDYQGALADYQKSSEIFNR-RYVKKSTSQV 495
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 4/199 (2%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P RG + Q + ++ DF +AI+ +P EA+ +RG L + EA+
Sbjct: 279 NPQSARDFYARGITKLDQYNYQESVEDFNQAIKLDPKYSEAYFKRGYVYTWLRKYSEALV 338
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++ + +PN D RG ++ AA+ED + ++L+ + + G+A +
Sbjct: 339 DFNQVIAIDPNYLDGYLNRGWTQISLQNNQAALEDFNRAMRLNPNYAITHAHQGMAYLKL 398
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAY 588
G Y+ A E+ +AI+LD N ++G+ Q + L + + A++ + ID AY
Sbjct: 399 GNYEAALESSKQAIRLDPN--NSYGYSIQANIFNALKDYQSAIKVSSTAILIDPDNFSAY 456
Query: 589 HLRGLLLHGLGQHKKAIKD 607
R + ++ A+ D
Sbjct: 457 TNRAIARTLTNDYQGALAD 475
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%)
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
SNP + + RG + E+++D ++A++ +P ++ +RG V + ++ A+
Sbjct: 278 SNPQSARDFYARGITKLDQYNYQESVEDFNQAIKLDPKYSEAYFKRGYVYTWLRKYSEAL 337
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + + +D Y G S+ + A E +A++L+ N+ H Y
Sbjct: 338 VDFNQVIAIDPNYLDGYLNRGWTQISLQNNQAALEDFNRAMRLNPNYAITHAHQGMAYLK 397
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L N E ALE +Q + +D S Y ++ + + L ++ AIK S+ + IDP N
Sbjct: 398 LGNYEAALESSKQAIRLDPNNSYGYSIQANIFNALKDYQSAIKVSSTAILIDPDNFSAYT 457
Query: 624 LRASCYHAIGEYREAV 639
RA +Y+ A+
Sbjct: 458 NRAIARTLTNDYQGAL 473
>gi|384210214|ref|YP_005595934.1| hypothetical protein Bint_2760 [Brachyspira intermedia PWS/A]
gi|343387864|gb|AEM23354.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 800
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 124/254 (48%), Gaps = 4/254 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
G+ + G Y AI+ + +I++ D +Y + R A E A++D++ AI+ NP
Sbjct: 295 GLLEYKLGNYKEAINYYTKIIEINDDIYY-SYYNRALAEESLELYEDALADYSRAIELNP 353
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ RG + + EA++D +KA+E E N A + + R ++ + + A+ED
Sbjct: 354 EDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDF 413
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ L E+ Y Y GL S + E +A + KAI+LD ++ A+ + +
Sbjct: 414 DKAISLYSEDAEFYYYRGLTNSYLNELDEALKYINKAIELDSKYINAYNERGLIHYRNTD 473
Query: 567 SEKALECLQQVLYIDKRFSKA-YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A++ ++V+ +D A YHL L L +++ A+K S + +DP+ + Y R
Sbjct: 474 YKSAIKDFKKVIELDNESVYANYHL-ALSYDALEEYETALKYYSRVIELDPTTPDPYYNR 532
Query: 626 ASCYHAIGEYREAV 639
A + Y EA+
Sbjct: 533 ALAEIEMELYNEAI 546
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 41/234 (17%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI DF +AI E + RG + L E EA++ ++KA+E + + +ERG+++
Sbjct: 409 AIEDFDKAISLYSEDAEFYYYRGLTNSYLNELDEALKYINKAIELDSKYINAYNERGLIH 468
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK------------------- 534
++ D+ +A++D ++LD E+ A +L L+ ++ EY+
Sbjct: 469 YRNTDYKSAIKDFKKVIELDNESVYANYHLALSYDALEEYETALKYYSRVIELDPTTPDP 528
Query: 535 ---------------KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+A E K I++D ++A+ ++ Y L +KA++C +V+
Sbjct: 529 YYNRALAEIEMELYNEAIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYTKVIE 588
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
DK AY+ RGL L + +A +D L IDP A+ Y+ IG
Sbjct: 589 ADKSSIDAYYNRGLSKVELKLYNEAFEDYIRALEIDPK-------YANAYNGIG 635
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 12/274 (4%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ + VD +RG++ N KY AI FD++++ P A RG ++++ + E
Sbjct: 74 INTTHDTLVDVYYNRGLSYFNLKKYEEAIKDFDKVIELSPDKSNAYYNRGHSKSYLGQYE 133
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
I DF + ++ N EA G LG EAI++ +L + D + RG
Sbjct: 134 EGIKDFKKVLEFNEDDAEAIYYIGLGYFYLGRYEEAIKNFDISLLLDDEIDDAYYYRGHS 193
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ A+ D + ++L ++ +Y GL +G Y+ A KAI+LD N+
Sbjct: 194 KRYLNMYEEALSDFNKVIQLRDDDSDSYYSKGLTEFFLGLYEDAINDFDKAIELDGNYSN 253
Query: 553 AW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A+ L + + + + +KALE + Y+ GLL + LG +K+AI
Sbjct: 254 AYYFRGLTKNSLELYKEAMDDYKKALEYADE-----DNIISIYNDMGLLEYKLGNYKEAI 308
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + I+ Y RA ++ Y +A+
Sbjct: 309 NYYTKIIEINDDIYYSYYNRALAEESLELYEDAL 342
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 128/278 (46%), Gaps = 3/278 (1%)
Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N K + +K I+ D S R +A+ + Y A++ + + ++ +P + R
Sbjct: 303 NYKEAINYYTKIIEINDDIYYSYYNRALAEESLELYEDALADYSRAIELNPEDTYSYNNR 362
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + + + A+ D+ +AI+ + + R + + EAI+D KA+
Sbjct: 363 GLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDFDKAISLYSE 422
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A+ + RG+ N + + A++ ++ ++LD + +AY GL +YK A +
Sbjct: 423 DAEFYYYRGLTNSYLNELDEALKYINKAIELDSKYINAYNERGLIHYRNTDYKSAIKDFK 482
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
K I+LD + A HL Y L E AL+ +V+ +D Y+ R L + +
Sbjct: 483 KVIELDNESVYANYHLALSYDALEEYETALKYYSRVIELDPTTPDPYYNRALAEIEMELY 542
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D + ID + ++ + CY ++ E+++A+
Sbjct: 543 NEAIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAI 580
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 125/257 (48%), Gaps = 6/257 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQI--LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG ++ Y A+S F+++ L++D ++ +G F E AI+DF +AI+
Sbjct: 190 RGHSKRYLNMYEEALSDFNKVIQLRDDD--SDSYYSKGLTEFFLGLYEDAINDFDKAIEL 247
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILHERGIVNFKFKDFNAA 502
+ + A+ RG + +L EA+ D KALE+ E N I ++ G++ +K ++ A
Sbjct: 248 DGNYSNAYYFRGLTKNSLELYKEAMDDYKKALEYADEDNIISIYNDMGLLEYKLGNYKEA 307
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ + ++++ + +Y LA S+ Y+ A + +AI+L+ ++ +
Sbjct: 308 INYYTKIIEINDDIYYSYYNRALAEESLELYEDALADYSRAIELNPEDTYSYNNRGLIKN 367
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
++ ++ALE + + +++ + Y+ R LL + +K+AI+D + + + E
Sbjct: 368 EMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDFDKAISLYSEDAEFY 427
Query: 623 YLRASCYHAIGEYREAV 639
Y R + E EA+
Sbjct: 428 YYRGLTNSYLNELDEAL 444
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ ++ L+ + E Y +A+ + ++++ DP P+ R A AI
Sbjct: 489 NESVYANYHLALSYDALEE--YETALKYYSRVIELDPTTPDPYYNRALAEIEMELYNEAI 546
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
DF + I+ + + +A+ G +L E +AI +K +E + +S D + RG+ +
Sbjct: 547 EDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYTKVIEADKSSIDAYYNRGLSKVE 606
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
K +N A ED +++D + +AY +G +
Sbjct: 607 LKLYNEAFEDYIRALEIDPKYANAYNGIGFS 637
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ Y SAI F ++++ D A + E E A+ ++ I+ +P
Sbjct: 464 RGLIHYRNTDYKSAIKDFKKVIELDNESVYANYHLALSYDALEEYETALKYYSRVIELDP 523
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ + + R A + EAI+D K +E + D GI K+ A++
Sbjct: 524 TTPDPYYNRALAEIEMELYNEAIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCY 583
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ ++ DK + AY GL+ + Y +A E +++A+++D + A+
Sbjct: 584 TKVIEADKSSIDAYYNRGLSKVELKLYNEAFEDYIRALEIDPKYANAYN 632
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Query: 330 KSSISDNK-----SSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
KS+I D K ++S + L+ +D L+E K +R+ + + D
Sbjct: 475 KSAIKDFKKVIELDNESVYANYHLALSYDALEEYETALK-----YYSRVIELDPTTPDPY 529
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+R +A++ Y AI F ++++ D +A G +E + AI +T+ I++
Sbjct: 530 YNRALAEIEMELYNEAIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYTKVIEA 589
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ S+ +A+ RG ++ L EA +D +ALE +P A+ + G K+
Sbjct: 590 DKSSIDAYYNRGLSKVELKLYNEAFEDYIRALEIDPKYANAYNGIGFSKTKY 641
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
NR Y L+ ++ I+D DK ++L P AY +G + S LG+ EE + ++K
Sbjct: 87 NRGLSYFNLKKYEEAIKDFDKVIELSPDKSNAYYNRGHSKSYLGQYEEGIKDFKK 141
>gi|296446900|ref|ZP_06888836.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
gi|296255575|gb|EFH02666.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
Length = 346
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 95/194 (48%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G A AI +D +++ P EA IGR AR +L+ AI+D+ +A+Q + + A
Sbjct: 132 KGDVAGAIGDYDTLIEAQPKSTEAYIGRADARQSAGDLDRAIADYDKALQLDKKSAMALA 191
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG+A A G+ A+ D A++ EP SA L +R D + A+ D A + D
Sbjct: 192 NRGRAYKAKGDLDHALADFDAAVKLEPKSARALLDRAAFYQAKGDLDHALADYDAAIARD 251
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ +Y GLAL + G+Y KA KAI+LD + A+ + + E A
Sbjct: 252 GKQAVSYNNRGLALHAKGDYDKALADFSKAIELDPKYARAYLNRANALRGKHELEPAKAD 311
Query: 574 LQQVLYIDKRFSKA 587
L+Q L +D + A
Sbjct: 312 LEQALRLDPNLAAA 325
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 105/245 (42%), Gaps = 35/245 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR-ELEAAISDFTEAIQ 443
++RG A +G Y AI+ +D L+ D A + A + ++ AI D+ I+
Sbjct: 88 VNRGGAYHAKGDYDLAIADYDMALQMDRRAAAAALSARAAAKRAKGDVAGAIGDYDTLIE 147
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+ P + EA+ R AR + G+ AI D KAL+ + SA L RG D + A+
Sbjct: 148 AQPKSTEAYIGRADARQSAGDLDRAIADYDKALQLDKKSAMALANRGRAYKAKGDLDHAL 207
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D A VKL E KSA +A+ LDR FYQ
Sbjct: 208 ADFDAAVKL--EPKSA----------------------RAL-LDR---------AAFYQA 233
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ + AL + D + + +Y+ RGL LH G + KA+ D S + +DP
Sbjct: 234 KGDLDHALADYDAAIARDGKQAVSYNNRGLALHAKGDYDKALADFSKAIELDPKYARAYL 293
Query: 624 LRASC 628
RA+
Sbjct: 294 NRANA 298
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S + + R A+ + G AI+ +D+ L+ D AL RG A + +L+ A++DF
Sbjct: 152 STEAYIGRADARQSAGDLDRAIADYDKALQLDKKSAMALANRGRAYKAKGDLDHALADFD 211
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A++ P + A R A G+ A+ D A+ + A + RG+ D+
Sbjct: 212 AAVKLEPKSARALLDRAAFYQAKGDLDHALADYDAAIARDGKQAVSYNNRGLALHAKGDY 271
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ A+ D S ++LD + AY AL E + A+ +A++LD N A L
Sbjct: 272 DKALADFSKAIELDPKYARAYLNRANALRGKHELEPAKADLEQALRLDPNLAAAKKALDD 331
Query: 560 FYQDLAN 566
+ LAN
Sbjct: 332 VTKLLAN 338
>gi|431805486|ref|YP_007232387.1| TPR domain-containing protein [Liberibacter crescens BT-1]
gi|430799461|gb|AGA64132.1| TPR domain protein [Liberibacter crescens BT-1]
Length = 292
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R + N KY A++ +D LK P Y ALIGRG ++ A +DF +AI
Sbjct: 110 VNRALVYRNIRKYNEALADYDLALKIHPSYDVALIGRGNLYRKLGSIDKAFADFNKAINL 169
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + G AW +G G+ AI+ SKA+ P+S + + RG+ KD A +
Sbjct: 170 NTTDGRAWHGQGLILQLKGQHERAIEAFSKAISLSPSSPEPYNGRGVSYVALKDDENAFD 229
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D + + LD +++ L G+YKK+ +++L A LD N+
Sbjct: 230 DFNTAINLDPNLAESWSNQALVYEMRGDYKKSLQSYLHAFNLDPNY 275
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
IS ++++ +P+ PE RG A A A+ DF A++ N EA+ R
Sbjct: 58 ISSLSEVIRSNPLDPEGYNARGVAYARAGNFRDALQDFNMAVKLNHRYYEAYVNRALVYR 117
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ + EA+ D AL+ P+ L RG + K + A D + + L+ + A+
Sbjct: 118 NIRKYNEALADYDLALKIHPSYDVALIGRGNLYRKLGSIDKAFADFNKAINLNTTDGRAW 177
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL L G++++A EA KAI L + E + Y L + E A + + +
Sbjct: 178 HGQGLILQLKGQHERAIEAFSKAISLSPSSPEPYNGRGVSYVALKDDENAFDDFNTAINL 237
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
D ++++ + L+ G +KK+++ +DP+
Sbjct: 238 DPNLAESWSNQALVYEMRGDYKKSLQSYLHAFNLDPN 274
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS +E I+SNP E + RG A A G +A+QD + A++ + R +V
Sbjct: 58 ISSLSEVIRSNPLDPEGYNARGVAYARAGNFRDALQDFNMAVKLNHRYYEAYVNRALVYR 117
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ +N A+ D +K+ A G +G KA KAI L+ AW
Sbjct: 118 NIRKYNEALADYDLALKIHPSYDVALIGRGNLYRKLGSIDKAFADFNKAINLNTTDGRAW 177
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
Q E+A+E + + + + Y+ RG+ L + A D ++ + +
Sbjct: 178 HGQGLILQLKGQHERAIEAFSKAISLSPSSPEPYNGRGVSYVALKDDENAFDDFNTAINL 237
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
DP+ E +A Y G+Y++++
Sbjct: 238 DPNLAESWSNQALVYEMRGDYKKSL 262
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%)
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S E I LS+ + P + + RG+ + +F A++D + VKL+ AY
Sbjct: 54 SQENISSLSEVIRSNPLDPEGYNARGVAYARAGNFRDALQDFNMAVKLNHRYYEAYVNRA 113
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L +I +Y +A + A+++ ++ A Y+ L + +KA + + ++
Sbjct: 114 LVYRNIRKYNEALADYDLALKIHPSYDVALIGRGNLYRKLGSIDKAFADFNKAINLNTTD 173
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+A+H +GL+L GQH++AI+ S + + PS+ E R Y A+
Sbjct: 174 GRAWHGQGLILQLKGQHERAIEAFSKAISLSPSSPEPYNGRGVSYVAL 221
>gi|260806523|ref|XP_002598133.1| hypothetical protein BRAFLDRAFT_123282 [Branchiostoma floridae]
gi|229283405|gb|EEN54145.1| hypothetical protein BRAFLDRAFT_123282 [Branchiostoma floridae]
Length = 1925
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 74/258 (28%), Positives = 120/258 (46%), Gaps = 4/258 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SR + Y SAI + Q +K P EA R + ++ A+ DF +A +
Sbjct: 1243 SRAEVYRKQDDYTSAIVNYTQAIKLQPDDHEAYYYRAEMYEKKGDMLLALEDFAQATRLM 1302
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
PS EA + G G + A+ D + L+ EPN+A RG + +++AVED
Sbjct: 1303 PSRTEAVMKHGLYYFNNGNWIGAVNDFTALLQQEPNNAIARTYRGRAYAQQGHYSSAVED 1362
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQFYQD 563
LSA + LD N A+ + G L + KKA + +I LD + ++A H Y D
Sbjct: 1363 LSAAIHLDPNNAIAFYHRGCLLRKV-HPKKALQDLSVSILLDDSEDNVKAILHRGILYTD 1421
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLL-LHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+ A+ + L +D+ + A+ GL+ LH L + KAI + + DP+ I
Sbjct: 1422 MERWTDAISDFEHALKLDRNLACAHVNLGLIFLHQLENYFKAIGRFTQAIKTDPTYIRAY 1481
Query: 623 YLRASCYHAIGEYREAVI 640
R+ YH I + ++A++
Sbjct: 1482 ICRSEAYHKIHKRKQALL 1499
Score = 83.6 bits (205), Expect = 3e-13, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 2/253 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G++ + +Y A+ F+ LK +P Y EA RG R + + I DF A+ +P
Sbjct: 1630 GLSHLELFQYMDALEAFNNALKVNPSYAEAYYQRGLTR-LRLKQSKGIQDFNRALALDPY 1688
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ R G +AI + ++A++ +PNS RG + + K + AV+DLS
Sbjct: 1689 IFQAFLSRAAYYGMKGRYTKAIMNCNEAIKLQPNSVRAYLYRGALKYYVKTYKLAVKDLS 1748
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+D+ AY + + +++KA + + + L+ L+ + Y + +
Sbjct: 1749 KAASIDRTCSLAYFNRAVCYHEMKDFEKALQDYGIVLLLEEKNLKVLINRGLLYFEQKDY 1808
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
AL+ +D + K H GL H L + + A+ S + +DP I+ R +
Sbjct: 1809 RNALQDFMAASQVDVKDPKLCHTVGLCRHKLDKLENAVDSFSQAIQVDPFFIDAYIGRGN 1868
Query: 628 CYHAIGEYREAVI 640
Y G + E +I
Sbjct: 1869 VYMDYG-HEEGII 1880
Score = 79.7 bits (195), Expect = 5e-12, Method: Composition-based stats.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 5/235 (2%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G A+ F Q + P EA++ G A++DFT +Q P+ A
Sbjct: 1285 KGDMLLALEDFAQATRLMPSRTEAVMKHGLYYFNNGNWIGAVNDFTALLQQEPNNAIART 1344
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG+A A G A++DLS A+ +PN+A + RG + K A++DLS + LD
Sbjct: 1345 YRGRAYAQQGHYSSAVEDLSAAIHLDPNNAIAFYHRGCLLRKVHP-KKALQDLSVSILLD 1403
Query: 514 --KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ-FYQDLANSEKA 570
++N A + G+ + + + A A++LDRN A +L F L N KA
Sbjct: 1404 DSEDNVKAILHRGILYTDMERWTDAISDFEHALKLDRNLACAHVNLGLIFLHQLENYFKA 1463
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ Q + D + +AY R H + + K+A+ D++ + + P +++ Y+R
Sbjct: 1464 IGRFTQAIKTDPTYIRAYICRSEAYHKIHKRKQALLDITRAIHLRP-DVQHYYMR 1517
Score = 72.4 bits (176), Expect = 7e-10, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 111/229 (48%), Gaps = 9/229 (3%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TR+ S++ +V + G+ N G + A++ F +L+++P A RG A A Q
Sbjct: 1299 TRLMPSRTEAV---MKHGLYYFNNGNWIGAVNDFTALLQQEPNNAIARTYRGRAYAQQGH 1355
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL---EFEPNSADILH 487
+A+ D + AI +P+ A+ RG + +A+QDLS ++ + E N ILH
Sbjct: 1356 YSSAVEDLSAAIHLDPNNAIAFYHRGCLLRKV-HPKKALQDLSVSILLDDSEDNVKAILH 1414
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-LSSIGEYKKAEEAHLKAIQL 546
RGI+ + + A+ D +KLD+ A+ LGL L + Y KA +AI+
Sbjct: 1415 -RGILYTDMERWTDAISDFEHALKLDRNLACAHVNLGLIFLHQLENYFKAIGRFTQAIKT 1473
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
D ++ A+ ++ Y + ++AL + + +++ Y RG LL
Sbjct: 1474 DPTYIRAYICRSEAYHKIHKRKQALLDITRAIHLRPDVQHYYMRRGQLL 1522
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/184 (23%), Positives = 88/184 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
LSR +G+Y AI ++ +K P A + RG + + + + A+ D ++A
Sbjct: 1694 LSRAAYYGMKGRYTKAIMNCNEAIKLQPNSVRAYLYRGALKYYVKTYKLAVKDLSKAASI 1753
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + A+ R + + +A+QD L E + +L RG++ F+ KD+ A++
Sbjct: 1754 DRTCSLAYFNRAVCYHEMKDFEKALQDYGIVLLLEEKNLKVLINRGLLYFEQKDYRNALQ 1813
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D A ++D ++ +GL + + + A ++ +AIQ+D F++A+ Y D
Sbjct: 1814 DFMAASQVDVKDPKLCHTVGLCRHKLDKLENAVDSFSQAIQVDPFFIDAYIGRGNVYMDY 1873
Query: 565 ANSE 568
+ E
Sbjct: 1874 GHEE 1877
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 4/215 (1%)
Query: 429 RELEAAISD----FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
REL A+ D TE I+ RRG LG +A DLSKA+ EP D
Sbjct: 1146 RELVEALQDEARQLTERIEREGETAFDLCRRGAINRKLGLLKKAEYDLSKAILLEPKLLD 1205
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
R ++ + AA+EDL+ +K +K++ AY +Y A + +AI
Sbjct: 1206 AYWHRHLLMLVQEKPAAAIEDLNFILKHNKKHVGAYRSRAEVYRKQDDYTSAIVNYTQAI 1265
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L + EA+ + + Y+ + ALE Q + ++A GL G A
Sbjct: 1266 KLQPDDHEAYYYRAEMYEKKGDMLLALEDFAQATRLMPSRTEAVMKHGLYYFNNGNWIGA 1325
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ D ++ L +P+N R Y G Y AV
Sbjct: 1326 VNDFTALLQQEPNNAIARTYRGRAYAQQGHYSSAV 1360
Score = 59.3 bits (142), Expect = 6e-06, Method: Composition-based stats.
Identities = 72/320 (22%), Positives = 118/320 (36%), Gaps = 78/320 (24%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI F Q +K DP Y A I R A + + A+ D T AI P + RRG
Sbjct: 1460 YFKAIGRFTQAIKTDPTYIRAYICRSEAYHKIHKRKQALLDITRAIHLRPDVQHYYMRRG 1519
Query: 457 Q----------------------------------ARAALGESVEAIQDLSKALEFEPNS 482
Q ++ L + +A++ +++A +P S
Sbjct: 1520 QLLLQMKNLELASFCVRHASELKDGLGASSTQQAVVQSFLKQHDKAVETMAQACRVKP-S 1578
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDK----------ENKSAYTYLGLALSSIGE 532
+ G K K F AV ++L E Y YLGL+ + +
Sbjct: 1579 PQMYTLLGKTQMKAKQFEEAVGTYKRAIQLLTPWQAKQPMPWEAAEVYYYLGLSHLELFQ 1638
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGH--LTQ------------------------------- 559
Y A EA A++++ ++ EA+ LT+
Sbjct: 1639 YMDALEAFNNALKVNPSYAEAYYQRGLTRLRLKQSKGIQDFNRALALDPYIFQAFLSRAA 1698
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+Y KA+ + + + +AY RG L + + +K A+KDLS ID +
Sbjct: 1699 YYGMKGRYTKAIMNCNEAIKLQPNSVRAYLYRGALKYYVKTYKLAVKDLSKAASIDRTCS 1758
Query: 620 ECLYLRASCYHAIGEYREAV 639
+ RA CYH + ++ +A+
Sbjct: 1759 LAYFNRAVCYHEMKDFEKAL 1778
>gi|145483311|ref|XP_001427678.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394760|emb|CAK60280.1| unnamed protein product [Paramecium tetraurelia]
Length = 456
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 143/277 (51%), Gaps = 6/277 (2%)
Query: 347 KLSFKWDMLKETSNEAKRN-KKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASA 400
KL+ +D + +A +N KK+ + I K+I + D+ S+G A N+ KY +
Sbjct: 158 KLNPNYDDYYNSKGQALQNLKKYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKKYEES 217
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I +D+ ++ +P Y E +G A ++ E +I ++ +AI+ NP+ + + +G A
Sbjct: 218 IIEYDKAIELNPNYAEYYNSKGYALYNLKKYEESIIEYDKAIELNPNDDDYYNIKGNALC 277
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
L + E+I + KA+E PN D + +G+ +F + ++ + ++L++ Y
Sbjct: 278 NLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIELNQNYSQYY 337
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G AL ++ +Y+++ + KAI+L+ N+ + + Q+ E+++ + + +
Sbjct: 338 CNKGQALCNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIEL 397
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++ +S+ Y +G L L +++++I + + ++P+
Sbjct: 398 NQNYSQYYCNKGQALFNLKKYEESIIEFDKAIKLNPN 434
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 131/257 (50%), Gaps = 5/257 (1%)
Query: 366 KKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
KK+ + I K+I + D+ S+G+A KY +I FD+ +K +P Y +
Sbjct: 110 KKYEESIIEYDKAIELNPNYDDYYNSKGLALQELYKYEESIIEFDKAIKLNPNYDDYYNS 169
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G A ++ E +I +F +AI+ NP+ + + +G A + E+I + KA+E P
Sbjct: 170 KGQALQNLKKYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKKYEESIIEYDKAIELNP 229
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A+ + +G + K + ++ + ++L+ + Y G AL ++ +Y+++ +
Sbjct: 230 NYAEYYNSKGYALYNLKKYEESIIEYDKAIELNPNDDDYYNIKGNALCNLKKYEESIIEY 289
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI+L+ N+ + + Q+ E+++ + + +++ +S+ Y +G L L +
Sbjct: 290 DKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIELNQNYSQYYCNKGQALCNLKK 349
Query: 601 HKKAIKDLSSGLGIDPS 617
++++I + + ++P+
Sbjct: 350 YEESIIEYDKAIELNPN 366
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 128/259 (49%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D+ S+G A N KY +I FD+ ++ +P Y + +G A Q++ E +I ++ +A
Sbjct: 165 DYYNSKGQALQNLKKYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKKYEESIIEYDKA 224
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP+ E + +G A L + E+I + KA+E PN D + +G K +
Sbjct: 225 IELNPNYAEYYNSKGYALYNLKKYEESIIEYDKAIELNPNDDDYYNIKGNALCNLKKYEE 284
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
++ + ++L+ Y GLAL +Y+++ KAI+L++N+ + + + Q
Sbjct: 285 SIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIELNQNYSQYYCNKGQAL 344
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+L E+++ + + ++ + Y+ +GL L +++++I + + ++ + +
Sbjct: 345 CNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIELNQNYSQY 404
Query: 622 LYLRASCYHAIGEYREAVI 640
+ + +Y E++I
Sbjct: 405 YCNKGQALFNLKKYEESII 423
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 130/271 (47%), Gaps = 18/271 (6%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I + ++G A N KY +I +D+ ++ +P Y + +G A + E +I +F
Sbjct: 94 IIPQYYCNKGNALCNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQELYKYEESIIEF 153
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+AI+ NP+ + + +GQA L + E+I + KA+E PN D + +G K
Sbjct: 154 DKAIKLNPNYDDYYNSKGQALQNLKKYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKK 213
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--- 555
+ ++ + ++L+ Y G AL ++ +Y+++ + KAI+L+ N + +
Sbjct: 214 YEESIIEYDKAIELNPNYAEYYNSKGYALYNLKKYEESIIEYDKAIELNPNDDDYYNIKG 273
Query: 556 ----HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+L ++ + + +KA+E ++ + Y+ +GL L +++++I +
Sbjct: 274 NALCNLKKYEESIIEYDKAIE-------LNPNYDDYYNSKGLALQEFYKYEESIIEFDKA 326
Query: 612 LGIDP--SNIECLYLRASCYHAIGEYREAVI 640
+ ++ S C +A C + +Y E++I
Sbjct: 327 IELNQNYSQYYCNKGQALC--NLKKYEESII 355
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++G A N KY +I +D+ ++ +P Y + +G A + E +I +F +AI
Sbjct: 336 YYCNKGQALCNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAI 395
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ N + + + +GQA L + E+I + KA++ PN AD +G+ N FK
Sbjct: 396 ELNQNYSQYYCNKGQALFNLKKYEESIIEFDKAIKLNPNDADSHFNKGVNNEVFK 450
>gi|118365491|ref|XP_001015966.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89297733|gb|EAR95721.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 3373
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 120/240 (50%), Gaps = 13/240 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G++++ + K AI F++ L P G G + F + E A+ +A+ +P
Sbjct: 437 KGLSRIEQKKLIDAIEDFNKALDLGSKNPGIFSGIGQSYRFLKNFEKALYYLNQALDKSP 496
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E +R +G+ +AI DL++AL+ +P +L++RG+ +K K F A++DL
Sbjct: 497 GNEEFLVQRSNIYVDIGKYQDAIDDLTEALKKKPLDPQVLYKRGLAFYKNKQFEKAIKDL 556
Query: 507 SACVKLDKENKSAYTY-------LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-LT 558
+ ENK Y+Y LG++ S++ Y+++ E KAIQL + + + H
Sbjct: 557 FRAL----ENKPYYSYESDIHYHLGISYSNMEIYERSIEPLSKAIQLSK-YEPCYIHERA 611
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ Y + +K+++ +V+ + R AY RG L L +++ A +D +DP+N
Sbjct: 612 KSYLLVGEYQKSVDDFTRVIELQPRNPHAYFGRGFALKSLKKYELASEDFEKAKELDPNN 671
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
Query: 427 FQREL-EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
F+ +L E A++ F AI + S + + A LG+ ++ +KA+E +PN A
Sbjct: 238 FENQLYEQALAKFQNAIDLDDSKATYYNNKALALYHLGQLDFSLTVYNKAIEVDPNDART 297
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+ RG A ED + ++L N Y GLA +G+Y A + KA+
Sbjct: 298 LYNRGNTYLALGQNKQAHEDFDSAIRLSPNNPKFYHSKGLAYQDVGDYINAIQFFKKALV 357
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + + + HL + +ALE +VL Y RGL+ + H+ AI
Sbjct: 358 IQEDHVPSIYHLGLMQHKNGDLNEALESFTKVLQAIGNDRLVYESRGLVYQEMKNHEYAI 417
Query: 606 KDLSSGLGIDPSNIECLYLRA 626
+D + + ++P E Y +
Sbjct: 418 QDFDAAIELEPGYAEIYYYKG 438
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 126/296 (42%), Gaps = 41/296 (13%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQ--ILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
F S+G+A + G Y +AI F + +++ED + ++ G + +L A+ FT+
Sbjct: 331 FYHSKGLAYQDVGDYINAIQFFKKALVIQEDHV--PSIYHLGLMQHKNGDLNEALESFTK 388
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
+Q+ + ++ RG + AIQD A+E EP A+I + +G+ + K
Sbjct: 389 VLQAIGNDRLVYESRGLVYQEMKNHEYAIQDFDAAIELEPGYAEIYYYKGLSRIEQKKLI 448
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ED + + L +N ++ +G + + ++KA +A+ E +
Sbjct: 449 DAIEDFNKALDLGSKNPGIFSGIGQSYRFLKNFEKALYYLNQALDKSPGNEEFLVQRSNI 508
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--------- 611
Y D+ + A++ L + L + + RGL + Q +KAIKDL
Sbjct: 509 YVDIGKYQDAIDDLTEALKKKPLDPQVLYKRGLAFYKNKQFEKAIKDLFRALENKPYYSY 568
Query: 612 -------LGIDPSNIEC---------------------LYLRASCYHAIGEYREAV 639
LGI SN+E ++ RA Y +GEY+++V
Sbjct: 569 ESDIHYHLGISYSNMEIYERSIEPLSKAIQLSKYEPCYIHERAKSYLLVGEYQKSV 624
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+F + R V+ GKY AI + LK+ P+ P+ L RG A ++ E AI D A
Sbjct: 500 EFLVQRSNIYVDIGKYQDAIDDLTEALKKKPLDPQVLYKRGLAFYKNKQFEKAIKDLFRA 559
Query: 442 IQSNPSAG---EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+++ P + G + + + +I+ LSKA++ +HER +
Sbjct: 560 LENKPYYSYESDIHYHLGISYSNMEIYERSIEPLSKAIQLSKYEPCYIHERAKSYLLVGE 619
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ +V+D + ++L N AY G AL S+ +Y+ A E KA +LD N
Sbjct: 620 YQKSVDDFTRVIELQPRNPHAYFGRGFALKSLKKYELASEDFEKAKELDPN 670
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 16/271 (5%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+S F+L + + ++ E A+ F + ++ +P + + R A + AI D+
Sbjct: 119 LSNQFKLQK-VVEIKE-----ALEEFQKAIELEPSDGYSYLNRALVYARLEDYHNAILDY 172
Query: 439 TEAIQSNPSAG----------EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
T A+Q P + +A+ RG + E ++I+DL KA E + ++ +
Sbjct: 173 TSALQKIPQSKSESKNVNAEFKAYFHRGNCYRQIKEYNKSIEDLQKACEIKKDNPPAQNN 232
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G+ F+ + + A+ + LD + Y LAL +G+ + + KAI++D
Sbjct: 233 LGLSYFENQLYEQALAKFQNAIDLDDSKATYYNNKALALYHLGQLDFSLTVYNKAIEVDP 292
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N + Y L +++A E + + K YH +GL +G + AI+
Sbjct: 293 NDARTLYNRGNTYLALGQNKQAHEDFDSAIRLSPNNPKFYHSKGLAYQDVGDYINAIQFF 352
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L I ++ +Y H G+ EA+
Sbjct: 353 KKALVIQEDHVPSIYHLGLMQHKNGDLNEAL 383
>gi|255525769|ref|ZP_05392699.1| TPR repeat-containing protein [Clostridium carboxidivorans P7]
gi|296186324|ref|ZP_06854728.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
gi|255510502|gb|EET86812.1| TPR repeat-containing protein [Clostridium carboxidivorans P7]
gi|296049125|gb|EFG88555.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
Length = 257
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 97/189 (51%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I +T AI N +A+ RG+ +L E +AI+D + +E P D + + +
Sbjct: 38 IKFYTMAINMNSKYIDAYFNRGEVFRSLKEYSKAIKDFIRVIELNPKDKDAYNNMAVAYY 97
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ +++ A++ + ++LD EN +AY GL + +Y KA + K I L+ EA+
Sbjct: 98 ENREYEKALDSYTKVIELDHENYNAYFNRGLTYKAQNKYHKAIKDFYKTIVLNPEDKEAY 157
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ Y + KA+E + + ID ++ AY+ RG + +G++K+AI+D + +
Sbjct: 158 FNRGIIYYNTGKYNKAVEDYTKAIEIDSKYEDAYNNRGTAFYLIGKYKEAIEDYIKVIKL 217
Query: 615 DPSNIECLY 623
+P++ E Y
Sbjct: 218 NPNSSEIYY 226
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +RG + +Y+ AI F ++++ +P +A A RE E A+ +T+
Sbjct: 52 IDAYFNRGEVFRSLKEYSKAIKDFIRVIELNPKDKDAYNNMAVAYYENREYEKALDSYTK 111
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I+ + A+ RG A + +AI+D K + P + RGI+ + +N
Sbjct: 112 VIELDHENYNAYFNRGLTYKAQNKYHKAIKDFYKTIVLNPEDKEAYFNRGIIYYNTGKYN 171
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
AVED + +++D + + AY G A IG+YK+A E ++K I+L+ N E + +++
Sbjct: 172 KAVEDYTKAIEIDSKYEDAYNNRGTAFYLIGKYKEAIEDYIKVIKLNPNSSEIYYNIS 229
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 89/173 (51%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
E I+ + A+ D RG V K+++ A++D ++L+ ++K AY + +A
Sbjct: 36 EKIKFYTMAINMNSKYIDAYFNRGEVFRSLKEYSKAIKDFIRVIELNPKDKDAYNNMAVA 95
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
EY+KA +++ K I+LD A+ + Y+ KA++ + + ++ +
Sbjct: 96 YYENREYEKALDSYTKVIELDHENYNAYFNRGLTYKAQNKYHKAIKDFYKTIVLNPEDKE 155
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY RG++ + G++ KA++D + + ID + R + ++ IG+Y+EA+
Sbjct: 156 AYFNRGIIYYNTGKYNKAVEDYTKAIEIDSKYEDAYNNRGTAFYLIGKYKEAI 208
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ + KY AI F + + +P EA RG + A+ D+T+AI+
Sbjct: 124 FNRGLTYKAQNKYHKAIKDFYKTIVLNPEDKEAYFNRGIIYYNTGKYNKAVEDYTKAIEI 183
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
+ +A+ RG A +G+ EAI+D K ++ PNS++I + ++
Sbjct: 184 DSKYEDAYNNRGTAFYLIGKYKEAIEDYIKVIKLNPNSSEIYYNISLI 231
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+A +Y A+ + ++++ D A RG Q + AI DF + I NP
Sbjct: 93 AVAYYENREYEKALDSYTKVIELDHENYNAYFNRGLTYKAQNKYHKAIKDFYKTIVLNPE 152
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+ RG G+ +A++D +KA+E + D + RG + + A+ED
Sbjct: 153 DKEAYFNRGIIYYNTGKYNKAVEDYTKAIEIDSKYEDAYNNRGTAFYLIGKYKEAIEDYI 212
Query: 508 ACVKLDKENKSAYTYLGL 525
+KL+ + Y + L
Sbjct: 213 KVIKLNPNSSEIYYNISL 230
>gi|294781973|ref|ZP_06747305.1| TPR domain protein [Fusobacterium sp. 1_1_41FAA]
gi|294481784|gb|EFG29553.1| TPR domain protein [Fusobacterium sp. 1_1_41FAA]
Length = 275
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 112/255 (43%), Gaps = 49/255 (19%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ----SNPSAGEAWKRR 455
I + + + +DP + I RG RE E A+ D++ I+ SN + G+ ++ R
Sbjct: 12 VIEEYTRKIVKDPNNIDYYIDRGDIYFSIREFEKALKDYSRVIELSSYSNSTKGKYYRDR 71
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L E +AI+D SKA+E EP D + RG + K++ A+ED S ++L
Sbjct: 72 GYIYYCLKEYKKAIEDFSKAIELEPTDRDYHNNRGNAYYYLKEYKKAIEDYSRAIELSPY 131
Query: 516 N----KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ Y G A + EY++A E + KAI+ E W
Sbjct: 132 SVVFRGDYYCNRGNAYYYLKEYERAMEDYSKAIE------EGW----------------- 168
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL-------GIDPSNIECLYL 624
V Y + YH RG L + LG+++KAI+D S + + P I+
Sbjct: 169 -----VTY------RYYHARGELYYYLGEYEKAIEDYSKAIEHYSIETDLFPLRIDYYID 217
Query: 625 RASCYHAIGEYREAV 639
R Y+ + EY +A+
Sbjct: 218 RGDAYYCLKEYEKAI 232
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 8/190 (4%)
Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
E Y++ + D + D R + F ++ + R + S S S +
Sbjct: 14 EEYTRKIVKDPNNIDYYIDRGDIYFSIREFEKALKDYSR----VIELSSYSNSTKGKYYR 69
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG +Y AI F + ++ +P + RG A + +E + AI D++ AI+ +
Sbjct: 70 DRGYIYYCLKEYKKAIEDFSKAIELEPTDRDYHNNRGNAYYYLKEYKKAIEDYSRAIELS 129
Query: 446 PSA----GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
P + G+ + RG A L E A++D SKA+E + H RG + + ++
Sbjct: 130 PYSVVFRGDYYCNRGNAYYYLKEYERAMEDYSKAIEEGWVTYRYYHARGELYYYLGEYEK 189
Query: 502 AVEDLSACVK 511
A+ED S ++
Sbjct: 190 AIEDYSKAIE 199
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL----YIDKRFSKAYHL 590
K E + + I D N ++ + Y + EKAL+ +V+ Y + K Y
Sbjct: 11 KVIEEYTRKIVKDPNNIDYYIDRGDIYFSIREFEKALKDYSRVIELSSYSNSTKGKYYRD 70
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG + + L ++KKAI+D S + ++P++ + R + Y+ + EY++A+
Sbjct: 71 RGYIYYCLKEYKKAIEDFSKAIELEPTDRDYHNNRGNAYYYLKEYKKAI 119
>gi|338209911|ref|YP_004653958.1| hypothetical protein [Runella slithyformis DSM 19594]
gi|336303724|gb|AEI46826.1| Tetratricopeptide TPR_1 repeat-containing protein [Runella
slithyformis DSM 19594]
Length = 443
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 132/292 (45%), Gaps = 38/292 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RGI +V A+ F+ L+ +P +AL+ RG + + A+ DF +
Sbjct: 97 LHRGICRVLLDDIGGALRDFNSSLELNPNEAKALLERGQIWVKMDDPKRALQDFDRGLML 156
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ AW RGQ + ALG+ ++ D +KA+E +A RG + D N AV
Sbjct: 157 EPTNVFAWNSRGQCKLALGDFKGSVTDFTKAIELGYTAA--YAGRGNARTRLNDLNGAVT 214
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGH------- 556
DL+ V+L+ ++ ++ Y GL S + ++ A + +AI+L+ ++++ +G
Sbjct: 215 DLTKAVELNLKDSESFYYRGLVRSKMNKFADALADYNEAIRLNPQSYMAYYGRGVCKAKL 274
Query: 557 ----------------------LTQFYQDLA--NSEKALECLQQVLYIDKRFSKA----Y 588
+Y DL NS K L+ + K S Y
Sbjct: 275 GNAADAVVDYNKAIEINGASAATLPYYNDLITENSIKLLDVIITKYTQPKDLSPGRPEVY 334
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
RG+ + +G+ K AI DL + I+P+N + ++RA ++G+ + A++
Sbjct: 335 LSRGIAKNTIGEGKSAIADLDKAIQIEPTNSDSYFIRAVVKSSLGDQKGALV 386
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 126/271 (46%), Gaps = 2/271 (0%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
++ +S +++ + + GI + ++G A A+ F ++ + Y RG + +
Sbjct: 14 LSGLSYAQTSTYEVFFQEGITKQSKGDIAGAMIAFSSAIQANVDYAPGYYQRGQLKISLK 73
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ A+ DF EAI +A+ RG R L + A++D + +LE PN A L ER
Sbjct: 74 DYRGAMRDFDEAIGITSQDPKAFLHRGICRVLLDDIGGALRDFNSSLELNPNEAKALLER 133
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + K D A++D + L+ N A+ G ++G++K + KAI+L
Sbjct: 134 GQIWVKMDDPKRALQDFDRGLMLEPTNVFAWNSRGQCKLALGDFKGSVTDFTKAIEL--G 191
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A+ L + A+ L + + ++ + S++++ RGL+ + + A+ D +
Sbjct: 192 YTAAYAGRGNARTRLNDLNGAVTDLTKAVELNLKDSESFYYRGLVRSKMNKFADALADYN 251
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ ++P + Y R C +G +AV+
Sbjct: 252 EAIRLNPQSYMAYYGRGVCKAKLGNAADAVV 282
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 113/249 (45%), Gaps = 4/249 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG ++ G + +++ F + ++ Y A GRG AR +L A++D T+A++ N
Sbjct: 166 SRGQCKLALGDFKGSVTDFTKAIELG--YTAAYAGRGNARTRLNDLNGAVTDLTKAVELN 223
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
E++ RG R+ + + +A+ D ++A+ P S + RG+ K + AV D
Sbjct: 224 LKDSESFYYRGLVRSKMNKFADALADYNEAIRLNPQSYMAYYGRGVCKAKLGNAADAVVD 283
Query: 506 LSACVKLDKENKSAYTYLG--LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ ++++ + + Y + +SI + + L E +
Sbjct: 284 YNKAIEINGASAATLPYYNDLITENSIKLLDVIITKYTQPKDLSPGRPEVYLSRGIAKNT 343
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ + A+ L + + I+ S +Y +R ++ LG K A+ D SS + + P + E +
Sbjct: 344 IGEGKSAIADLDKAIQIEPTNSDSYFIRAVVKSSLGDQKGALVDCSSAIKLSPRHAEAFF 403
Query: 624 LRASCYHAI 632
LR +++
Sbjct: 404 LRGVIKYSL 412
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%)
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P PE + RG A+ E ++AI+D +AIQ P+ +++ R +++LG+ A+ D
Sbjct: 328 PGRPEVYLSRGIAKNTIGEGKSAIADLDKAIQIEPTNSDSYFIRAVVKSSLGDQKGALVD 387
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
S A++ P A+ RG++ + D N A D S
Sbjct: 388 CSSAIKLSPRHAEAFFLRGVIKYSLLDKNDACYDFS 423
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 370 VTRISKSKSISV---DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
+T+ ++ K +S + LSRGIA+ G+ SAI+ D+ ++ +P ++ R ++
Sbjct: 317 ITKYTQPKDLSPGRPEVYLSRGIAKNTIGEGKSAIADLDKAIQIEPTNSDSYFIRAVVKS 376
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+ + A+ D + AI+ +P EA+ RG + +L + +A D SKA E+
Sbjct: 377 SLGDQKGALVDCSSAIKLSPRHAEAFFLRGVIKYSLLDKNDACYDFSKAGEY 428
>gi|42527528|ref|NP_972626.1| TPR [Treponema denticola ATCC 35405]
gi|449111465|ref|ZP_21748062.1| hypothetical protein HMPREF9735_01111 [Treponema denticola ATCC
33521]
gi|449113718|ref|ZP_21750202.1| hypothetical protein HMPREF9721_00720 [Treponema denticola ATCC
35404]
gi|41818113|gb|AAS12537.1| TPR domain protein [Treponema denticola ATCC 35405]
gi|448958128|gb|EMB38865.1| hypothetical protein HMPREF9721_00720 [Treponema denticola ATCC
35404]
gi|448958492|gb|EMB39223.1| hypothetical protein HMPREF9735_01111 [Treponema denticola ATCC
33521]
Length = 369
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 114/240 (47%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++ LK +P Y E+++ RG + AI DF+ I+ P+ A+ R
Sbjct: 74 AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ +A+ D++ A++ +P + RG + ++ KD++ A+ + + +KL+ + A
Sbjct: 134 LEFGDFEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDA 193
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL +I +Y A + KA++L + + H+ L + A+ + +
Sbjct: 194 YFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIK 253
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I+ ++AY RG + L + +IKDL + + SN Y +A ++ E EA+
Sbjct: 254 INNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAI 313
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 3/265 (1%)
Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
I++S I+ ++ L RG+ KY AI F ++++ P P A R +
Sbjct: 78 INRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFG 137
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E A+ D AI+ +P +K RG+ L + AI + ++AL+ P +D R
Sbjct: 138 DFEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSR 197
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ KD+N+A+ D +KL + Y ++GL+ ++ EY A A K I+++
Sbjct: 198 GLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNT 257
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ Y L N + +++ L + + ++ + + L+ + +AI L
Sbjct: 258 DAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLE 317
Query: 610 SGLGIDPSNIECLYLRASCYHAIGE 634
G+ + P + ++A Y ++ E
Sbjct: 318 EGINLFPDYYDFYQVKAKIYRSLSE 342
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 7/251 (2%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
I Q+N KY I ++DP + RG + + AI D +++ NP+
Sbjct: 36 IYQMNLSKYERQI-------EKDPNNYKLYYVRGYYYSLSGYYDLAIHDINRSLKINPNY 88
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
E+ RG A+ + EAI D S+ +E PN + R +F DF A+ D+++
Sbjct: 89 EESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKALCDINS 148
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+KLD ++ + G + +Y A + +A++L+ +A+ FY+ + +
Sbjct: 149 AIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYN 208
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
AL + L + R + Y GL + L ++ AI + + I+ ++ E R S
Sbjct: 209 SALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSI 268
Query: 629 YHAIGEYREAV 639
Y + Y ++
Sbjct: 269 YFILKNYDNSI 279
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI + Q LK +P +A RG ++ +A+SD+ +A++ + + + G
Sbjct: 173 YDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIG 232
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ AL E AI +K ++ A+ RG + F K+++ +++DL + L N
Sbjct: 233 LSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSN 292
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ + +AL S E +A + + I L ++ + + + Y+ L+ K
Sbjct: 293 EVVFYNKAVALYSKNELNEAIDCLEEGINLFPDYYDFYQVKAKIYRSLSEQTK 345
>gi|425435038|ref|ZP_18815498.1| exported hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389675288|emb|CCH95612.1| exported hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 695
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 5/178 (2%)
Query: 404 FDQIL-KEDPMYPEA---LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
FD L KE+ P + GRG AR + ++ + +ISD+ EAI+ NP A++ R AR
Sbjct: 489 FDVTLTKENIAVPRSASIYFGRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADAR 548
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNF-KFKDFNAAVEDLSACVKLDKENKS 518
LGE EAI+DL++A+ P A RG ++ +FK + A++D + + D +
Sbjct: 549 DELGEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYHI 608
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY GL +G+ + A H + I+L ++ A+ + Y+DL KALE ++
Sbjct: 609 AYFERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKK 666
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ GI++ N G Y AI+ ++++L+ P +A + RG A Q + +AAI+D TE I+
Sbjct: 243 LTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKL 302
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG AR ++ A++D S A+ +P + + RG V + ++ A+
Sbjct: 303 NPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
D + ++LD + AY G A S+ +Y+ A + +A+ NFLE G Q+
Sbjct: 363 DYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL----NFLEYSGLGFQY 414
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
R+ + +VD L RGIA + + KY +AI+ +++K +P A RG AR +
Sbjct: 261 AYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPNNSRAYFWRGLARDYS 320
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ D++ AI+ +P A+ RG A LGE +AI D ++A+ +P+
Sbjct: 321 EDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYEN 380
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL 512
RG + KD+ A+ D + +
Sbjct: 381 RGDARYSLKDYQGAISDYTQALNF 404
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%)
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G ++A G EAI ++ L+ PN+ D +RGI + + AA+ D++ +KL+
Sbjct: 246 GISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPN 305
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N AY + GLA + + A E + AI+LD + A+ + Y +L +KA+
Sbjct: 306 NSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYT 365
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ + +D AY RG + L ++ AI D + L
Sbjct: 366 EAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL 402
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L+ G ++A E AI+ + +Q +P+ +A+ +RG A + AI D+++
Sbjct: 240 EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEV 299
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN++ RG+ +D A+ED S ++LD E AY G + +GEY+K
Sbjct: 300 IKLNPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQK 359
Query: 536 AEEAHLKAIQLDRNFLEAW 554
A + +AI+LD + A+
Sbjct: 360 AILDYTEAIRLDPDVFLAY 378
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ +S S+ F RG A+ Y +IS +++ +K +P Y A R AR E +
Sbjct: 498 IAVPRSASIYF--GRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQ 555
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSADILHERGI 491
AI D +AI NP A+ RG + ++ EA++D ++A+ +P ERG+
Sbjct: 556 EAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYHIAYFERGL 615
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++ + D A+ D + ++L + +AY GL+ +GE KA E KA +L
Sbjct: 616 IHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAEL 670
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 63/118 (53%)
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG++ ++ G Y++A A+ + +Q+ N ++A+ Y + + A+ + +V+ ++
Sbjct: 245 LGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNP 304
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
S+AY RGL ++ A++D S + +DP R + Y +GEY++A++
Sbjct: 305 NNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 42/289 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y AI + + ++ DP A RG AR ++ + AISD+T+A+
Sbjct: 346 NRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQALNFL 405
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--NSADILHERGIVNFKFKDFNAAV 503
+G ++ R R G+ + ++K E P IL + I N +
Sbjct: 406 EYSGLGFQYR---RHESGQGL----IITKIFENSPAFKQGLILDDLIIAINGKSTLNKSA 458
Query: 504 EDLSAC--------------------------VKLDKEN----KSAYTYLGL--ALSSIG 531
EDL V L KEN +SA Y G A +
Sbjct: 459 EDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAVPRSASIYFGRGNARYYLK 518
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+YK + + +AI+ + + A+ +L ++A++ L Q + ++ + ++AY LR
Sbjct: 519 DYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKDLNQAISLNPKDARAYFLR 578
Query: 592 GLL-LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G + + +++A+KD + + DP + R + +G+ R A+
Sbjct: 579 GWIHSNRFKAYQEALKDYNQAILNDPQYHIAYFERGLIHRELGDNRGAI 627
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWK 453
G++ AI +Q + +P A RG + + + + A+ D+ +AI ++P A+
Sbjct: 552 GEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYHIAYF 611
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG LG++ AI D ++ + P+ A+ + RG+ + A+ED +L
Sbjct: 612 ERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAELY 671
Query: 514 KE 515
K+
Sbjct: 672 KQ 673
>gi|428768755|ref|YP_007160545.1| hypothetical protein Cyan10605_0355 [Cyanobacterium aponinum PCC
10605]
gi|428683034|gb|AFZ52501.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanobacterium
aponinum PCC 10605]
Length = 539
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 4/262 (1%)
Query: 346 SKLSFKWDMLKETSNEAKRNKK----FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAI 401
S L K+D LK+ S +C ++ K+ SI L R IA+ G A+
Sbjct: 206 SYLDQKYDYLKQASLHNNHGDYLSAIYCYDQVLKNNSIDYKVYLLRAIAKWKIGSQQGAL 265
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+ +Q + P Y A RG + + + AI D+TE I+ NP + A+ RR
Sbjct: 266 ADLNQAIIIYPKYDLAYHWRGYIKYKIQSYQEAIFDYTEEIKINPLSIYAYYRRALCYEK 325
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
++A +D S+ L N + RG + ++ D A+ED ++L+ AY
Sbjct: 326 TNSLLKAFEDYSQVLILNNNLYQGFYNRGNIRYELGDKEGALEDYRKALQLNPSLAKAYY 385
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
L + + +GE +A + AI L N+++A+ +L Y DL +A+ + +D
Sbjct: 386 NLAIIYNDLGEINQAIYNYKSAINLVPNYVKAYYNLAIIYVDLGKYRQAIIHYDKACELD 445
Query: 582 KRFSKAYHLRGLLLHGLGQHKK 603
F +A + + LL L Q K+
Sbjct: 446 NEFIQAKYNKQFLLEYLRQEKQ 467
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 131/310 (42%), Gaps = 45/310 (14%)
Query: 342 TESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQV--------- 392
+S+ K+ F + T N +KR +F + + F L+ + Q
Sbjct: 161 NKSQYKIIFAGFLPTYTLNISKRQNRFTFSFSHLLYMGGLKFYLTSYLDQKYDYLKQASL 220
Query: 393 --NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
N G Y SAI +DQ+LK + + + + R A+
Sbjct: 221 HNNHGDYLSAIYCYDQVLKNNSIDYKVYLLRAIAK------------------------- 255
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
WK +G A+ DL++A+ P H RG + +K + + A+ D + +
Sbjct: 256 -WK--------IGSQQGALADLNQAIIIYPKYDLAYHWRGYIKYKIQSYQEAIFDYTEEI 306
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
K++ + AY L KA E + + + L+ N + + + +L + E A
Sbjct: 307 KINPLSIYAYYRRALCYEKTNSLLKAFEDYSQVLILNNNLYQGFYNRGNIRYELGDKEGA 366
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
LE ++ L ++ +KAY+ ++ + LG+ +AI + S + + P+ ++ Y A Y
Sbjct: 367 LEDYRKALQLNPSLAKAYYNLAIIYNDLGEINQAIYNYKSAINLVPNYVKAYYNLAIIYV 426
Query: 631 AIGEYREAVI 640
+G+YR+A+I
Sbjct: 427 DLGKYRQAII 436
>gi|449116295|ref|ZP_21752746.1| hypothetical protein HMPREF9726_00731 [Treponema denticola H-22]
gi|448954182|gb|EMB34965.1| hypothetical protein HMPREF9726_00731 [Treponema denticola H-22]
Length = 369
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 114/240 (47%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++ LK +P Y E+++ RG + AI DF+ I+ P+ A+ R
Sbjct: 74 AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ +A+ D++ A++ +P + RG + ++ KD++ A+ + + +KL+ + A
Sbjct: 134 LEFGDFEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDA 193
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL +I +Y A + KA++L + + H+ L + A+ + +
Sbjct: 194 YFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIK 253
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I+ ++AY RG + L + +IKDL + + SN Y +A ++ E EA+
Sbjct: 254 INNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAI 313
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 3/265 (1%)
Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
I++S I+ ++ L RG+ KY AI F ++++ P P A R +
Sbjct: 78 INRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFG 137
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E A+ D AI+ +P +K RG+ L + AI + ++AL+ P +D R
Sbjct: 138 DFEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSR 197
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ KD+N+A+ D +KL + Y ++GL+ ++ EY A A K I+++
Sbjct: 198 GLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNT 257
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ Y L N + +++ L + + ++ + + L+ + +AI L
Sbjct: 258 DAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLE 317
Query: 610 SGLGIDPSNIECLYLRASCYHAIGE 634
G+ + P + ++A Y ++ E
Sbjct: 318 EGINLFPDYYDFYQVKAKIYRSLSE 342
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 7/251 (2%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
I Q+N KY I ++DP + RG + + AI D +++ NP+
Sbjct: 36 IYQMNLSKYERQI-------EKDPNNYKLYYERGYYYSLSGYYDLAIHDINRSLKINPNY 88
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
E+ RG A+ + EAI D S+ +E PN + R +F DF A+ D+++
Sbjct: 89 EESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKALCDINS 148
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+KLD ++ + G + +Y A + +A++L+ +A+ FY+ + +
Sbjct: 149 AIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYN 208
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
AL + L + R + Y GL + L ++ AI + + I+ ++ E R S
Sbjct: 209 SALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSI 268
Query: 629 YHAIGEYREAV 639
Y + Y ++
Sbjct: 269 YFILKNYDNSI 279
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI + Q LK +P +A RG ++ +A+SD+ +A++ + + + G
Sbjct: 173 YDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIG 232
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ AL E AI +K ++ A+ RG + F K+++ +++DL + L N
Sbjct: 233 LSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSN 292
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ + +AL S E +A + + I L ++ + + + Y+ L+ K
Sbjct: 293 EVVFYNKAVALYSKNELNEAIDCLEEGINLFPDYYDFYQVKAKIYRSLSEQTK 345
>gi|398814140|ref|ZP_10572823.1| tetratricopeptide repeat protein [Brevibacillus sp. BC25]
gi|398037084|gb|EJL30286.1| tetratricopeptide repeat protein [Brevibacillus sp. BC25]
Length = 731
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 116/250 (46%), Gaps = 2/250 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ V ++ A F Q+++ D YPE RG + L+ A+ D+ +AI+ +
Sbjct: 449 NKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEALEDYNQAIKLS 508
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E + R A LG+ +A+ D L+ +P + D L R + ++ + F A +D
Sbjct: 509 PPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMARKD 568
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ ++ LGL S G +A + A+ DR + AW + Y ++
Sbjct: 569 AEFGLEIEPDHARLLCTLGLIEMSDGNNDQALKTFTAALNKDREMMAAWTNRAVLYYEMG 628
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI-DPSNIECLYL 624
++A+ L + + ++K + Y+ R + G+ + +I D + L D + Y
Sbjct: 629 EYDRAIADLTEAIALEKNATVLYN-RAWVYEAQGEWQLSISDYTEALAFSDADEQDIYYR 687
Query: 625 RASCYHAIGE 634
R C+ +G+
Sbjct: 688 RGLCFIKMGD 697
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 1/222 (0%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L +G + E A F++ IQ + + E + RG + +G EA++D ++A++
Sbjct: 447 LHNKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEALEDYNQAIK 506
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P ++ R + D A+ D + +D EN L + +++ A
Sbjct: 507 LSPPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMAR 566
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ ++++ + L N+++AL+ L D+ A+ R +L +
Sbjct: 567 KDAEFGLEIEPDHARLLCTLGLIEMSDGNNDQALKTFTAALNKDREMMAAWTNRAVLYYE 626
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+G++ +AI DL+ + ++ N LY RA Y A GE++ ++
Sbjct: 627 MGEYDRAIADLTEAIALE-KNATVLYNRAWVYEAQGEWQLSI 667
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 13/256 (5%)
Query: 366 KKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
K+F + S+ I +D + RG G+ A+ ++Q +K P +PE
Sbjct: 458 KRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEALEDYNQAIKLSPPFPEVYFN 517
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R TA ++E A++D+ + +P + R + + A +D LE EP
Sbjct: 518 RATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMARKDAEFGLEIEP 577
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ A +L G++ + + A++ +A + D+E +A+T + +GEY +A
Sbjct: 578 DHARLLCTLGLIEMSDGNNDQALKTFTAALNKDREMMAAWTNRAVLYYEMGEYDRAIADL 637
Query: 541 LKAIQLDRN----FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+AI L++N + AW + Q L+ S+ + + + D Y+ RGL
Sbjct: 638 TEAIALEKNATVLYNRAWVYEAQGEWQLSISDYT----EALAFSDADEQDIYYRRGLCFI 693
Query: 597 GLGQHKKAIKDLSSGL 612
+G + +D + L
Sbjct: 694 KMGDRELGTEDWNKHL 709
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%)
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+LH +G++ K F A E S +++D Y G S +G +A E + +AI
Sbjct: 446 LLHNKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEALEDYNQAI 505
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L F E + + + L + EKA+ +L ID R LL+ + + + A
Sbjct: 506 KLSPPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMA 565
Query: 605 IKDLSSGLGIDPSNIECL 622
KD GL I+P + L
Sbjct: 566 RKDAEFGLEIEPDHARLL 583
>gi|409196336|ref|ZP_11224999.1| tetratricopeptide repeat protein [Marinilabilia salmonicolor JCM
21150]
Length = 713
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
++++ ++ GIA + + A ++ +IL E P A + RG AR + A+ D
Sbjct: 124 PLNMNLMINLGIAYIQTKDFEKATQVYSEILDESPNMVTAYLNRGLARFSANDTVGALQD 183
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
F++A++ NP + + R GE +A++D+ A+ P A + RGI+ ++
Sbjct: 184 FSQAVERNPYIPDGFVNRSMVYYHQGEFEKALKDVDAAVLLRPEEASLYMNRGIIRYQLD 243
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ D + V+LD N Y G+ + IG+ A + + L L +
Sbjct: 244 SLRGTMADFNKFVELDPRNAMGYNNRGILRAEIGDLDGAINDFSRVLALRGEDLPTLYYR 303
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
YQ+ + KAL V FS Y+ R + LGQ + A D ++ + ++
Sbjct: 304 GMLYQEKGDFRKALSDYNIVADAYPDFSPVYYNRAEVRMALGQEEAARLDYNTAMKLE 361
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 34/253 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI ++I + Q L DP+ +I G A ++ E A ++E + +P
Sbjct: 99 RGIVHQKLENPKASIDDYKQGLDVDPLNMNLMINLGIAYIQTKDFEKATQVYSEILDESP 158
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG AR + ++V A+QD S+A+E P D R +V + +F A++D+
Sbjct: 159 NMVTAYLNRGLARFSANDTVGALQDFSQAVERNPYIPDGFVNRSMVYYHQGEFEKALKDV 218
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A V L E S Y G+ QLD G + F
Sbjct: 219 DAAVLLRPEEASLYMNRGII----------------RYQLD----SLRGTMADF------ 252
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ + +D R + Y+ RG+L +G AI D S L + ++ LY R
Sbjct: 253 --------NKFVELDPRNAMGYNNRGILRAEIGDLDGAINDFSRVLALRGEDLPTLYYRG 304
Query: 627 SCYHAIGEYREAV 639
Y G++R+A+
Sbjct: 305 MLYQEKGDFRKAL 317
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y I +++++ P + A R ++ R+ EA++ D+++AI NP EA+ RG
Sbjct: 604 YNLIIDDLNKVIELAPEFEFAWFNRAFMKSLLRDFEASVEDYSKAIALNPDFAEAYFNRG 663
Query: 457 QARAALGESVEAIQDLSKALEF 478
R L E+ + DLSKA E
Sbjct: 664 LNRIYLEETTKGTMDLSKAGEL 685
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 76/174 (43%)
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
+ AIQ ++ ++ +P ++ + R + + +DF A+ED ++++ AY G+
Sbjct: 42 ILAIQYFNQIIKAKPYLSEPYYYRAVGKYHLEDFPGALEDCDRALEINPYMIDAYNLRGI 101
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
+ K + + + + + +D + +L Y + EKA + ++L
Sbjct: 102 VHQKLENPKASIDDYKQGLDVDPLNMNLMINLGIAYIQTKDFEKATQVYSEILDESPNMV 161
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY RGL A++D S + +P + R+ Y+ GE+ +A+
Sbjct: 162 TAYLNRGLARFSANDTVGALQDFSQAVERNPYIPDGFVNRSMVYYHQGEFEKAL 215
>gi|145531132|ref|XP_001451336.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418984|emb|CAK83939.1| unnamed protein product [Paramecium tetraurelia]
Length = 503
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 14/234 (5%)
Query: 416 EALIGRGTARA-----F--QRELEAAISDF----TEAIQSNPSAGEAWKRRGQARAALGE 464
+A + RG ++ F Q E E A++D+ T +P A + RG +G
Sbjct: 183 KAFMNRGMVQSKIGILFHNQGEYEKALNDYCYGNTILDSKHPIA---YFNRGILYNQMGN 239
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S A+QD KA+ +P D +RG + +K D AV D + ++LD N AY G
Sbjct: 240 SENALQDYDKAILIDPKYVDTYFQRGFIYYKKGDIENAVNDYNQILQLDFSNIKAYLQRG 299
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L I E +KA KA+QLD E + + YQ + E + V+ D +
Sbjct: 300 LMYLQINEREKAINDLNKAMQLDPQLSENYNLRSFLYQQTSEVENSSNDCPYVIQSDLQA 359
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
S Y++RG + + + + A+KD+S + I P N + +LR Y+ + + EA
Sbjct: 360 SLYYYIRGFIHQVMSKSENALKDISQAIEIYPLNFQAFFLRGVIYNEMCKTEEA 413
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 116/256 (45%), Gaps = 8/256 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RGI G +A+ +D+ + DP Y + RG + ++E A++D+ + +Q
Sbjct: 228 FNRGILYNQMGNSENALQDYDKAILIDPKYVDTYFQRGFIYYKKGDIENAVNDYNQILQL 287
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ S +A+ +RG + E +AI DL+KA++ +P ++ + R + + + +
Sbjct: 288 DFSNIKAYLQRGLMYLQINEREKAINDLNKAMQLDPQLSENYNLRSFLYQQTSEVENSSN 347
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++ D + Y G + + + A + +AI++ +A+ Y ++
Sbjct: 348 DCPYVIQSDLQASLYYYIRGFIHQVMSKSENALKDISQAIEIYPLNFQAFFLRGVIYNEM 407
Query: 565 ANSEKALECLQQVLYID-KRFSKAYH-------LRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+E+A + + + ID K F + + GL+ +G + A+ D + IDP
Sbjct: 408 CKTEEAFQDFSEAIKIDPKNFQDWFQRGDVVISILGLIYEQMGNFENALNDYDQAILIDP 467
Query: 617 SNIECLYLRASCYHAI 632
+ E + R ++ I
Sbjct: 468 QDTEVYFRRGEFFNLI 483
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 8/220 (3%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD RG +G +A++ ++QIL+ D +A + RG E E AI+D +
Sbjct: 258 VDTYFQRGFIYYKKGDIENAVNDYNQILQLDFSNIKAYLQRGLMYLQINEREKAINDLNK 317
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A+Q +P E + R E + D ++ + ++ + RG ++
Sbjct: 318 AMQLDPQLSENYNLRSFLYQQTSEVENSSNDCPYVIQSDLQASLYYYIRGFIHQVMSKSE 377
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH---- 556
A++D+S +++ N A+ G+ + + + ++A + +AI++D + W
Sbjct: 378 NALKDISQAIEIYPLNFQAFFLRGVIYNEMCKTEEAFQDFSEAIKIDPKNFQDWFQRGDV 437
Query: 557 ----LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
L Y+ + N E AL Q + ID + ++ Y RG
Sbjct: 438 VISILGLIYEQMGNFENALNDYDQAILIDPQDTEVYFRRG 477
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 16/189 (8%)
Query: 467 EAIQDLSKALEFEPNSADILHERGI--VNFKFK------DFNAAVEDLSACVKLDKENKS 518
+AIQD + LE + N A + H GI VN K D +E + + LD +
Sbjct: 124 QAIQDCMQCLEIDKNFALVYHRMGISTVNKLGKIVGSKGDKEKELEYYNIAISLDANSLK 183
Query: 519 AYTYLGLALSSIG-------EYKKAEEAHLKA-IQLDRNFLEAWGHLTQFYQDLANSEKA 570
A+ G+ S IG EY+KA + LD A+ + Y + NSE A
Sbjct: 184 AFMNRGMVQSKIGILFHNQGEYEKALNDYCYGNTILDSKHPIAYFNRGILYNQMGNSENA 243
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
L+ + + ID ++ Y RG + + G + A+ D + L +D SNI+ R Y
Sbjct: 244 LQDYDKAILIDPKYVDTYFQRGFIYYKKGDIENAVNDYNQILQLDFSNIKAYLQRGLMYL 303
Query: 631 AIGEYREAV 639
I E +A+
Sbjct: 304 QINEREKAI 312
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA--------LSSIGEYKKAEEAHLKA 543
+ ++ K + A++D C+++DK Y +G++ + S G+ +K E + A
Sbjct: 115 IYWRTKLYEQAIQDCMQCLEIDKNFALVYHRMGISTVNKLGKIVGSKGDKEKELEYYNIA 174
Query: 544 IQLDRNFLEAWGH--LTQ-----FYQDLANSEKALE--CLQQVLYIDKRFSKAYHLRGLL 594
I LD N L+A+ + + Q + + EKAL C + +D + AY RG+L
Sbjct: 175 ISLDANSLKAFMNRGMVQSKIGILFHNQGEYEKALNDYCYGNTI-LDSKHPIAYFNRGIL 233
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +G + A++D + IDP ++ + R Y+ G+ AV
Sbjct: 234 YNQMGNSENALQDYDKAILIDPKYVDTYFQRGFIYYKKGDIENAV 278
>gi|298375300|ref|ZP_06985257.1| TPR domain protein [Bacteroides sp. 3_1_19]
gi|298267800|gb|EFI09456.1| TPR domain protein [Bacteroides sp. 3_1_19]
Length = 681
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 108/243 (44%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++K P E R A+ + + A D T +Q NP +A+ RG
Sbjct: 13 YVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLDDFKGAEEDCTLCLQRNPFLTQAYYARG 72
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + + EAI D K LEF+P +L + + KD+N A + + +
Sbjct: 73 IARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKY 132
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
Y G G+ KA + KAI++D + A+G+ + + + + AL L +
Sbjct: 133 SMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNE 192
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L +D R S Y RGL+ + + + A+ D + +D N+ + R +G+
Sbjct: 193 ALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNN 252
Query: 637 EAV 639
A+
Sbjct: 253 RAI 255
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 118/251 (47%), Gaps = 4/251 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ KY AI + + L+ P + L+ A +++ A F + + ++
Sbjct: 70 ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 129
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++++A+ D +KA+E +P A R I++++ D+ A+ D
Sbjct: 130 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 189
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGH-LTQFYQD 563
L+ ++LD Y GL + + + A + + I +D RN + + L +F
Sbjct: 190 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRF--Q 247
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ ++ +A+E V+ + AY+ R LL G ++ A++D L P+ +
Sbjct: 248 VGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFV 307
Query: 624 LRASCYHAIGE 634
R+ +G+
Sbjct: 308 SRSEAKRKLGD 318
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A R R QR+ AAI D+ EAI+ +P EA+ RG AR + G
Sbjct: 592 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 651
Query: 464 ESVEAIQDLSKALEF 478
+ I DLSKA E
Sbjct: 652 DVNRGIADLSKAGEL 666
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 76/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + +G A++ +++ ++ DP Y A R + + A++D EA++
Sbjct: 137 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 196
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + RG R + + A+ D + + + + RG++ F+ D N A+E
Sbjct: 197 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 256
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L G+Y+ A + + ++ FL +
Sbjct: 257 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 306
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG R + AI DF I
Sbjct: 203 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 262
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q P A+ R R G+ A+QD L+ P R K D A
Sbjct: 263 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 322
Query: 503 VEDLSACVKLDKENKSA 519
D A +K++++ K+
Sbjct: 323 DRDYWAAIKMEEQAKNG 339
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA+ E E + D+ I+ NP A+ R R A + AI D ++A+E +P A+
Sbjct: 581 RAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAE 638
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+ D N + DLS +L
Sbjct: 639 AYYNRGLARLSQGDVNRGIADLSKAGEL 666
>gi|225619120|ref|YP_002720346.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225213939|gb|ACN82673.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 357
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 1/260 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ +RG+A+ + G Y AI F +++ +P Y A G + E AI+ +
Sbjct: 37 SVELYNNRGLAKSSLGMYEEAIDDFQKVIHINPHYVNAYNNIGLVKHNLGMYEEAINFYK 96
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+ + + +A G A LG EAI+ KA+E PN + G++ +
Sbjct: 97 KALDIDNNCIQACNNIGLANHNLGMYEEAIKYYIKAIEISPN-VHTYNNIGLIKNDLGMY 155
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E + ++LD AY +GL+ ++ Y +A + K ++LD + A+ ++
Sbjct: 156 EEAIEYFNKVIRLDDHYIKAYYNIGLSKYNLKNYDEALDYFNKVLELDSKNVHAYNNIGI 215
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
QDL +ALE + L +DK +SKAY+ RGL L L ++ A+ D + L ++P+
Sbjct: 216 IKQDLKLHNEALEYFNRALLLDKNYSKAYYNRGLSLLELELYECALADFNGCLELEPNYY 275
Query: 620 ECLYLRASCYHAIGEYREAV 639
R + Y EAV
Sbjct: 276 PAYCKRGEVKLKLKNYEEAV 295
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ F++ L D Y +A RG + E A++DF ++ P+ A+ +RG+ +
Sbjct: 226 ALEYFNRALLLDKNYSKAYYNRGLSLLELELYECALADFNGCLELEPNYYPAYCKRGEVK 285
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
L EA++D +K +E+ + I RG +K KD+N A++D + C
Sbjct: 286 LKLKNYEEAVEDFNKYIEYGNPDSKIYFYRGYAEYKLKDYNNALKDFNMC 335
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 116/252 (46%), Gaps = 1/252 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + N G Y AI+ + + L D +A G A E AI + +AI+ +P+
Sbjct: 79 GLVKHNLGMYEEAINFYKKALDIDNNCIQACNNIGLANHNLGMYEEAIKYYIKAIEISPN 138
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ G + LG EAI+ +K + + + + G+ + K+++ A++ +
Sbjct: 139 V-HTYNNIGLIKNDLGMYEEAIEYFNKVIRLDDHYIKAYYNIGLSKYNLKNYDEALDYFN 197
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD +N AY +G+ + + +A E +A+ LD+N+ +A+ + +L
Sbjct: 198 KVLELDSKNVHAYNNIGIIKQDLKLHNEALEYFNRALLLDKNYSKAYYNRGLSLLELELY 257
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E AL L ++ + AY RG + L +++A++D + + + + + R
Sbjct: 258 ECALADFNGCLELEPNYYPAYCKRGEVKLKLKNYEEAVEDFNKYIEYGNPDSKIYFYRGY 317
Query: 628 CYHAIGEYREAV 639
+ + +Y A+
Sbjct: 318 AEYKLKDYNNAL 329
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 1/222 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A N G Y AI + + ++ P G + E AI F + I+ +
Sbjct: 113 GLANHNLGMYEEAIKYYIKAIEISPN-VHTYNNIGLIKNDLGMYEEAIEYFNKVIRLDDH 171
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G ++ L EA+ +K LE + + + GI+ K N A+E +
Sbjct: 172 YIKAYYNIGLSKYNLKNYDEALDYFNKVLELDSKNVHAYNNIGIIKQDLKLHNEALEYFN 231
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ LDK AY GL+L + Y+ A ++L+ N+ A+ + L N
Sbjct: 232 RALLLDKNYSKAYYNRGLSLLELELYECALADFNGCLELEPNYYPAYCKRGEVKLKLKNY 291
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
E+A+E + + SK Y RG + L + A+KD +
Sbjct: 292 EEAVEDFNKYIEYGNPDSKIYFYRGYAEYKLKDYNNALKDFN 333
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
NS D L E F D+ ++E + ++ Y GLA SS+G Y++A +
Sbjct: 2 NSIDNLLELANKAFNSADYKKSLEYFDQLIFYYGDSVELYNNRGLAKSSLGMYEEAIDDF 61
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
K I ++ +++ A+ ++ +L E+A+ ++ L ID +A + GL H LG
Sbjct: 62 QKVIHINPHYVNAYNNIGLVKHNLGMYEEAINFYKKALDIDNNCIQACNNIGLANHNLGM 121
Query: 601 HKKAIKDLSSGLGIDPS 617
+++AIK + I P+
Sbjct: 122 YEEAIKYYIKAIEISPN 138
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 82/186 (44%), Gaps = 33/186 (17%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
++++ + + + +S ++ + RG+ + A++D + ++ +AY +GL
Sbjct: 22 KSLEYFDQLIFYYGDSVELYNNRGLAKSSLGMYEEAIDDFQKVIHINPHYVNAYNNIGLV 81
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL-------------TQFY------------ 561
++G Y++A + KA+ +D N ++A ++ ++Y
Sbjct: 82 KHNLGMYEEAINFYKKALDIDNNCIQACNNIGLANHNLGMYEEAIKYYIKAIEISPNVHT 141
Query: 562 --------QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
DL E+A+E +V+ +D + KAY+ GL + L + +A+ + L
Sbjct: 142 YNNIGLIKNDLGMYEEAIEYFNKVIRLDDHYIKAYYNIGLSKYNLKNYDEALDYFNKVLE 201
Query: 614 IDPSNI 619
+D N+
Sbjct: 202 LDSKNV 207
>gi|333987314|ref|YP_004519921.1| hypothetical protein MSWAN_1100 [Methanobacterium sp. SWAN-1]
gi|333825458|gb|AEG18120.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 197
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 87/164 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI GKY AI FD++LK DP AL +G + + A+ F + ++ +
Sbjct: 16 NKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYFDKVLELD 75
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW +G A +G+ EAI+ K+LE +PN+++ + +GI K + + A++
Sbjct: 76 PKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQEALKS 135
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ +K A+ GLAL+ + +Y++A E K ++LD N
Sbjct: 136 FNKALKSYPNYVDAWNNKGLALAQLKKYQEALECFDKVLKLDPN 179
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 85/168 (50%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+AW +G G+ EAI+ K L+ +P + L +G+ A++
Sbjct: 12 KAWNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYFDKV 71
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++LD +N A+ GLA IG+Y++A +++ K+++LD N E W + + L ++
Sbjct: 72 LELDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQE 131
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
AL+ + L + A++ +GL L L ++++A++ L +DP+
Sbjct: 132 ALKSFNKALKSYPNYVDAWNNKGLALAQLKKYQEALECFDKVLKLDPN 179
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 76/151 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C ++ K +V ++G+ GK A+ FD++L+ DP EA +G A
Sbjct: 33 CFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYFDKVLELDPKNAEAWNNKGLAFEDI 92
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + AI + ++++ +P+ E W +G + L + EA++ +KAL+ PN D +
Sbjct: 93 GKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQEALKSFNKALKSYPNYVDAWNN 152
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+G+ + K + A+E +KLD +++A
Sbjct: 153 KGLALAQLKKYQEALECFDKVLKLDPNSETA 183
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A + GKY AI +D+ L+ DP E +G + + + A+ F +A++S
Sbjct: 84 NKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQEALKSFNKALKSY 143
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
P+ +AW +G A A L + EA++ K L+ +PNS L + I+
Sbjct: 144 PNYVDAWNNKGLALAQLKKYQEALECFDKVLKLDPNSETALKAKKII 190
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 69/126 (54%)
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ N A+ G+ L G+YK+A E K +++D + A + Y L +++AL+
Sbjct: 8 RNNVKAWNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDY 67
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+VL +D + ++A++ +GL +G++++AIK L +DP+N E Y + +
Sbjct: 68 FDKVLELDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLE 127
Query: 634 EYREAV 639
+Y+EA+
Sbjct: 128 KYQEAL 133
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 79/159 (49%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+ + +GI K + A+E +K+D +N A G+ +G+ ++A +
Sbjct: 9 NNVKAWNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYF 68
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
K ++LD EAW + ++D+ ++A++ + L +D S+ ++ +G+ L L +
Sbjct: 69 DKVLELDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEK 128
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+++A+K + L P+ ++ + + +Y+EA+
Sbjct: 129 YQEALKSFNKALKSYPNYVDAWNNKGLALAQLKKYQEAL 167
>gi|118400972|ref|XP_001032807.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89287152|gb|EAR85144.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 925
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 37/261 (14%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L +G + + + AI +T+AI+ NP +A+ RG A L AI D S+A
Sbjct: 495 ENLHSQGFEMRKKGDFQKAIQLYTQAIELNPRHFKAFFNRGFAYDKLEMYDLAIADYSQA 554
Query: 476 LEFEPNS----------------------------------ADILHERGIVNFKFKDFNA 501
LE +PN+ AD H R K K++
Sbjct: 555 LEIDPNNAYAYYNRGISLDRKNLFDDAISNFTMAISLDDKKADFYHNRAFAYRKKKNYEM 614
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWGHLT 558
A+ D + +++D ++ AY I ++ AE + +A+ L + N L +G L
Sbjct: 615 AISDYTKAIEIDSKHFKAYYNRAFCFDKINNFESAESDYKQALMLQPKNINVLYHYGCLL 674
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ + E AL C + L +D ++ AY+ RGL+ L + +A +D S+ + + +N
Sbjct: 675 EKINTPQSLEDALICFNEALSLDSSYAPAYNARGLVYDKLKNYDQAYQDFSNAISLHQNN 734
Query: 619 IECLYLRASCYHAIGEYREAV 639
++ RA C +G+ EA+
Sbjct: 735 PVFIHNRACCLRNMGKLNEAI 755
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ LE A+ F EA+ + S A+ RG L +A QD S A+ N+ +H
Sbjct: 681 QSLEDALICFNEALSLDSSYAPAYNARGLVYDKLKNYDQAYQDFSNAISLHQNNPVFIHN 740
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R N A+ED +A ++LD N Y+ +GL + ++ A E + K ++
Sbjct: 741 RACCLRNMGKLNEAIEDFNAALQLDSTNPIIYSNIGLVHRKLENFEHAIECYTKEMEYST 800
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + L ++A+ + L ++ + A H RG+ +G ++ AI+D
Sbjct: 801 ENARTINNRAYCFAKLKIYKEAVGDYTRALALEPKNIHALHNRGICYERMGLYRNAIEDF 860
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+S + + N + R CY +IGE A+
Sbjct: 861 TSVISHNKDNANAYFNRGCCYDSIGELDLAI 891
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 22/274 (8%)
Query: 361 EAKRNKKFCVTRIS---------------KSKSISVDFRLSRGIAQVNEGK-YASAISIF 404
+A N+ FC +I+ + K+I+V + + ++N + A+ F
Sbjct: 631 KAYYNRAFCFDKINNFESAESDYKQALMLQPKNINVLYHYGCLLEKINTPQSLEDALICF 690
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI---QSNPSAGEAWKRRGQARAA 461
++ L D Y A RG + + A DF+ AI Q+NP R
Sbjct: 691 NEALSLDSSYAPAYNARGLVYDKLKNYDQAYQDFSNAISLHQNNPVF---IHNRACCLRN 747
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
+G+ EAI+D + AL+ + + I G+V+ K ++F A+E + ++ EN
Sbjct: 748 MGKLNEAIEDFNAALQLDSTNPIIYSNIGLVHRKLENFEHAIECYTKEMEYSTENARTIN 807
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
+ + YK+A + +A+ L+ + A + Y+ + A+E V+ +
Sbjct: 808 NRAYCFAKLKIYKEAVGDYTRALALEPKNIHALHNRGICYERMGLYRNAIEDFTSVISHN 867
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
K + AY RG +G+ AI D S+ L ID
Sbjct: 868 KDNANAYFNRGCCYDSIGELDLAIADYSTALEID 901
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
ISI + L DP + +AL R ++ + E AI+D I + A+ RG A
Sbjct: 129 ISICSKKLTIDPKHKKALYIRASSYMKKGLFEQAINDTNTLISIDEYNVGAYYIRGCAYE 188
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ + IQD S LE + + + + R K DFN A+ED + ++LD+E
Sbjct: 189 KQGDIEKGIQDFSFVLELDASHVNAVFARAACYNKLGDFNKAIEDYNKALELDQE 243
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 43/72 (59%)
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E+A+ ++ ID+ AY++RG G +K I+D S L +D S++ ++ RA+
Sbjct: 160 EQAINDTNTLISIDEYNVGAYYIRGCAYEKQGDIEKGIQDFSFVLELDASHVNAVFARAA 219
Query: 628 CYHAIGEYREAV 639
CY+ +G++ +A+
Sbjct: 220 CYNKLGDFNKAI 231
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE-IQD 71
+ K ++ I + + +++DS I + I L L N+ AI + S E +
Sbjct: 748 MGKLNEAIEDFNAALQLDST-NPIIYSNIGLVHR-KLENFEHAIECYTKEMEYSTENART 805
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
I NRA+C+++L+++K + D +AL L+P + A +G + +G A+
Sbjct: 806 INNRAYCFAKLKIYKEAVGDYTRALALEPKNIHALHNRGICYERMGLYRNAI 857
>gi|328954592|ref|YP_004371926.1| hypothetical protein Desac_2946 [Desulfobacca acetoxidans DSM
11109]
gi|328454916|gb|AEB10745.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 668
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 157/364 (43%), Gaps = 29/364 (7%)
Query: 289 DKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRS-K 347
++ + R GR D + L + + +YSK SD D ++R +
Sbjct: 160 NRGMAHSRRGRYDQAIADYNRALELNPGDAQVYHLRGIAYSKLGRSDLAKEDFQKARGLQ 219
Query: 348 LSFKWDMLKET-SNEAKRNK---------KFCVTRISKSKSISVDFRLSRGIAQVNEGKY 397
+ + + ++EA+ ++ +F R S +SI + ++G+ +Y
Sbjct: 220 IPVTLESVPPALTDEARPSREVRESAPPEQFITVRSSLDRSIKPIY--NQGVDHFFNKQY 277
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
A+S F Q++ P +PEA RG A + + E AI+DF ++ +P+ G+A+ RG
Sbjct: 278 DLAVSEFSQVINAHPNFPEAYFNRGMIYALKGQDELAIADFNAVLRIDPNRGDAYVNRGM 337
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
A+ G +A+ D ++AL+F P+ A I RG V A ED +L +
Sbjct: 338 AQVRRGRLEKALADFNRALQFNPSDAQIYRARGNVYDMLHKTQQAREDFQKAKEL--SGR 395
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL-EAWGHLTQFYQDLANSEKALECLQQ 576
AY+ A++ + R + + G + + A + A + +Q
Sbjct: 396 VAYS-----------PPSAQDTAIPVPPSTRPVVAPSAGPVAP--PESAADQAAWDKIQN 442
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L I+ + + AY+ RG L G+ AI D S L + P ++ R + + G++
Sbjct: 443 ALKINPKNADAYYQRGGLQLKRGKIDDAIADFSRSLELRPKFVKAYVDRGTAWAKKGQFD 502
Query: 637 EAVI 640
+A++
Sbjct: 503 QALV 506
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 121/577 (20%), Positives = 221/577 (38%), Gaps = 112/577 (19%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG---- 129
NR +S+ + I D ++AL+L+P Q Y L+G A+S LGR + A ++K
Sbjct: 160 NRGMAHSRRGRYDQAIADYNRALELNPGDAQVYHLRGIAYSKLGRSDLAKEDFQKARGLQ 219
Query: 130 -----------------YEHALHQSADLKQFLELEELLTAAKQDRSVTCEYD-----VSN 167
+ +SA +QF+ + L DRS+ Y+ N
Sbjct: 220 IPVTLESVPPALTDEARPSREVRESAPPEQFITVRSSL-----DRSIKPIYNQGVDHFFN 274
Query: 168 SMSSLTVSESG--LNANDKMSETSENHNKSDICDSSSQSR-DVSETCSKSSHDPDLCNGR 224
L VSE +NA+ E N+ I Q +++ + DP+ R
Sbjct: 275 KQYDLAVSEFSQVINAHPNFPEAY--FNRGMIYALKGQDELAIADFNAVLRIDPN----R 328
Query: 225 SDEAKGGSSVPVSKSGLHINGKLREVSENH--NGSSDGSKSTHASRDASEINRQSSDDFD 282
D ++N + +V +D +++ + ++I R + +D
Sbjct: 329 GDA--------------YVNRGMAQVRRGRLEKALADFNRALQFNPSDAQIYRARGNVYD 374
Query: 283 ICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDST 342
+ + +A + + ++ +G +++ S D+ ++ ++ + +
Sbjct: 375 MLHK-TQQAREDFQKAKELSG------RVAYSPPSAQDTAIPVPPSTRPVVAPSAGPVAP 427
Query: 343 ESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAIS 402
+ WD ++ N K N K + D RG Q+ GK AI+
Sbjct: 428 PESAADQAAWDKIQ---NALKINPK------------NADAYYQRGGLQLKRGKIDDAIA 472
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
F + L+ P + +A + RGTA A + + + A+ D A+ +P + E+ RG A
Sbjct: 473 DFSRSLELRPKFVKAYVDRGTAWAKKGQFDQALVDLNRALDLDPDSVESLNNRGGIYARQ 532
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
A+ DL++AL+ PN A + R V + AV DL V LD ++ AY
Sbjct: 533 SMYDRALSDLNRALDLNPNYAKAYYNRAQVYYFTGHLQQAVADLEKAVSLDPKDADAYYN 592
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
GL +Y DLA ++ Q L ++
Sbjct: 593 RGLIYDKRKQY-----------------------------DLAIAD-----FNQALALNP 618
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
R ++AY+ R + L G+ ++A+ + L P +
Sbjct: 619 RLAQAYYDRAVALEKTGRRQEALDSYEAFLRCAPPEL 655
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AA A++ NP +A+ +RG + G+ +AI D S++LE P +RG
Sbjct: 434 QAAWDKIQNALKINPKNADAYYQRGGLQLKRGKIDDAIADFSRSLELRPKFVKAYVDRGT 493
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K F+ A+ DL+ + LD ++ + G + Y +A +A+ L+ N+
Sbjct: 494 AWAKKGQFDQALVDLNRALDLDPDSVESLNNRGGIYARQSMYDRALSDLNRALDLNPNYA 553
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+A+ + Q Y + ++A+ L++ + +D + + AY+ RGL+ Q+ AI D +
Sbjct: 554 KAYYNRAQVYYFTGHLQQAVADLEKAVSLDPKDADAYYNRGLIYDKRKQYDLAIADFNQA 613
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
L ++P + Y RA G +EA+
Sbjct: 614 LALNPRLAQAYYDRAVALEKTGRRQEAL 641
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 102/241 (42%), Gaps = 14/241 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ + +Y A++ F +I+ P + E+ RG + E AI+DF ++ +
Sbjct: 92 NQGVDYFHTKQYDLAVATFSRIIANHPDHVESYYNRGLIYTLLGKEELAIADFGTVLRLD 151
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A + G +AI D ++ALE P A + H RGI K + A ED
Sbjct: 152 PVRPAAYYNRGMAHSRRGRYDQAIADYNRALELNPGDAQVYHLRGIAYSKLGRSDLAKED 211
Query: 506 LSACVKLD-----KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG----H 556
L + A T + E E+ LDR+ + H
Sbjct: 212 FQKARGLQIPVTLESVPPALTDEARPSREVRESAPPEQFITVRSSLDRSIKPIYNQGVDH 271
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
DLA SE QV+ F +AY RG++ GQ + AI D ++ L IDP
Sbjct: 272 FFNKQYDLAVSE-----FSQVINAHPNFPEAYFNRGMIYALKGQDELAIADFNAVLRIDP 326
Query: 617 S 617
+
Sbjct: 327 N 327
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 120/278 (43%), Gaps = 12/278 (4%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+RI + V+ +RG+ GK AI+ F +L+ DP+ P A RG A + +
Sbjct: 109 TFSRIIANHPDHVESYYNRGLIYTLLGKEELAIADFGTVLRLDPVRPAAYYNRGMAHSRR 168
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA--------LEFEP 480
+ AI+D+ A++ NP + + RG A + LG S A +D KA LE P
Sbjct: 169 GRYDQAIADYNRALELNPGDAQVYHLRGIAYSKLGRSDLAKEDFQKARGLQIPVTLESVP 228
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ L + + + ++ + ++ LD+ K Y G+ +Y A
Sbjct: 229 PA---LTDEARPSREVRESAPPEQFITVRSSLDRSIKPIYN-QGVDHFFNKQYDLAVSEF 284
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+ I NF EA+ + Y E A+ VL ID AY RG+ G+
Sbjct: 285 SQVINAHPNFPEAYFNRGMIYALKGQDELAIADFNAVLRIDPNRGDAYVNRGMAQVRRGR 344
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+KA+ D + L +PS+ + R + Y + + ++A
Sbjct: 345 LEKALADFNRALQFNPSDAQIYRARGNVYDMLHKTQQA 382
>gi|428774009|ref|YP_007165797.1| serine/threonine protein kinase [Cyanobacterium stanieri PCC 7202]
gi|428688288|gb|AFZ48148.1| serine/threonine protein kinase [Cyanobacterium stanieri PCC 7202]
Length = 724
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 14/219 (6%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q E+AI +T A++ NP +A+ RG A LG +AI D ++ +E +P D +
Sbjct: 447 QENYESAIEQYTLAVEINPDFADAYYNRGLTYADLGLDDQAIADYTRTIEIDPEYLDAYN 506
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RGI+ +++ A+ D + D + A+ LG+A S+G ++ A ++ +AI+L+
Sbjct: 507 NRGIIFANLQEYEKAITDYMKVISSDPDYVLAHNNLGVAYDSLGRFRDAIASYTRAIELN 566
Query: 548 RNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+ A+ G L Q+ + + + +A+E + + Y RG LG
Sbjct: 567 PGYGLAYNNRAISHGSLEQYNEAIRDHTRAIE-------FNFVSADVYFRRGNAYRNLGS 619
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
H+ AI D + + ++ S+ + R ++++G+ + A+
Sbjct: 620 HESAIADYTRAIELEASHADAYNNRGISHYSLGQNQRAI 658
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI N +Y AI+ + +++ DP Y A G A AI+ +T AI+ N
Sbjct: 507 NRGIIFANLQEYEKAITDYMKVISSDPDYVLAHNNLGVAYDSLGRFRDAIASYTRAIELN 566
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P G A+ R + +L + EAI+D ++A+EF SAD+ RG +A+ D
Sbjct: 567 PGYGLAYNNRAISHGSLEQYNEAIRDHTRAIEFNFVSADVYFRRGNAYRNLGSHESAIAD 626
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ + AY G++ S+G+ ++A + +AI+L ++ ++ +L Y+D
Sbjct: 627 YTRAIELEASHADAYNNRGISHYSLGQNQRAIADYTRAIELIPDYAHSFYNLGLVYRDQG 686
Query: 566 NSEKALECLQQ 576
+ ALE L Q
Sbjct: 687 DINNALEHLGQ 697
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 80/157 (50%)
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A+ +E+G + + +++ +A+E + V+++ + AY GL + +G +A + +
Sbjct: 434 ANAYYEQGNLYREQENYESAIEQYTLAVEINPDFADAYYNRGLTYADLGLDDQAIADYTR 493
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
I++D +L+A+ + + +L EKA+ +V+ D + A++ G+ LG+ +
Sbjct: 494 TIEIDPEYLDAYNNRGIIFANLQEYEKAITDYMKVISSDPDYVLAHNNLGVAYDSLGRFR 553
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AI + + ++P RA + ++ +Y EA+
Sbjct: 554 DAIASYTRAIELNPGYGLAYNNRAISHGSLEQYNEAI 590
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
E NEA R+ TR + +S D RG A N G + SAI+ + + ++ + + +
Sbjct: 584 EQYNEAIRDH----TRAIEFNFVSADVYFRRGNAYRNLGSHESAIADYTRAIELEASHAD 639
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
A RG + + + AI+D+T AI+ P ++ G G+ A++ L +A
Sbjct: 640 AYNNRGISHYSLGQNQRAIADYTRAIELIPDYAHSFYNLGLVYRDQGDINNALEHLGQA 698
>gi|428307393|ref|YP_007144218.1| peptidase S1 and S6 chymotrypsin/Hap [Crinalium epipsammum PCC
9333]
gi|428248928|gb|AFZ14708.1| peptidase S1 and S6 chymotrypsin/Hap [Crinalium epipsammum PCC
9333]
Length = 445
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQI 407
L + T+N ++ + T + + + VDF L G+ +V +G + AI+++D+
Sbjct: 209 LGIGINTFLATNNTFQKPQIISATAVEERGA--VDF-LRGGLDKVAKGDFNGAIALYDRA 265
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
+ +P EA RG AR+ Q++ AI+D+ AI NP+ EA+ RG AR+ +
Sbjct: 266 ISLNPNLAEAYNNRGLARSKQQDFTGAIADYDRAISLNPNLAEAYNNRGLARSKQQDFTG 325
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
AI D +A+ PN A+ + RG+ KDFN A+ D + L+ AY G
Sbjct: 326 AIADYDRAISLNPNLAEAYNNRGLARSGQKDFNGAIADYDRAISLNPNLAEAYANRGF 383
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ AI+ + AI NP+ EA+ RG AR+ + AI D +A+ PN A+ + R
Sbjct: 254 DFNGAIALYDRAISLNPNLAEAYNNRGLARSKQQDFTGAIADYDRAISLNPNLAEAYNNR 313
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ K +DF A+ D + L+ AY GLA S ++ A + +AI L+ N
Sbjct: 314 GLARSKQQDFTGAIADYDRAISLNPNLAEAYNNRGLARSGQKDFNGAIADYDRAISLNPN 373
Query: 550 FLEAWGH 556
EA+ +
Sbjct: 374 LAEAYAN 380
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ R G + A G+ AI +A+ PN A+ + RG+ K +DF A+ D +
Sbjct: 242 FLRGGLDKVAKGDFNGAIALYDRAISLNPNLAEAYNNRGLARSKQQDFTGAIADYDRAIS 301
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK-- 569
L+ AY GLA S ++ A + +AI L+ N EA+ + + LA S +
Sbjct: 302 LNPNLAEAYNNRGLARSKQQDFTGAIADYDRAISLNPNLAEAYNN-----RGLARSGQKD 356
Query: 570 ---ALECLQQVLYIDKRFSKAYHLRGLL 594
A+ + + ++ ++AY RG +
Sbjct: 357 FNGAIADYDRAISLNPNLAEAYANRGFV 384
>gi|427706884|ref|YP_007049261.1| hypothetical protein Nos7107_1468 [Nostoc sp. PCC 7107]
gi|427359389|gb|AFY42111.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
7107]
Length = 1333
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 14/261 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ Q G ASAI+ +D+ ++ P E RG A++ + AI P
Sbjct: 436 QGLQQAKTGDLASAIASYDRAIELQPESYEYWFNRGLTLFHLERFAEAVAAYDTAIDLKP 495
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG LG EAI S+A+E PN + + + K A+
Sbjct: 496 DHYKAWYNRGGTLGELGLFAEAIASFSQAIEIHPNYPEAWASKALALLKLGQVWEAITSY 555
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQ 559
++L ++ + Y G+A + +Y +A ++ +A++L ++ E W +L Q
Sbjct: 556 DQALELQPQDPETWYYRGIAFAVSEQYTEAIASYNQALELQPDYYEVWIDRGVVLFNLKQ 615
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ + +A+ +KAL F A++ RG+ L L + ++AI + I P
Sbjct: 616 WSEAIASWDKALAA-------QPDFYLAWYNRGVALDNLVRREEAIASYQKAIAIKPDFH 668
Query: 620 ECLYLRASCYHAIGEYREAVI 640
Y +A + Y EA++
Sbjct: 669 LPWYNQAVALFYLERYTEAIV 689
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 110/235 (46%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S ++ +RG+ + ++A A++ +D + P + +A RG AI+ F+
Sbjct: 463 SYEYWFNRGLTLFHLERFAEAVAAYDTAIDLKPDHYKAWYNRGGTLGELGLFAEAIASFS 522
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ +P+ EAW + A LG+ EAI +ALE +P + + RGI + +
Sbjct: 523 QAIEIHPNYPEAWASKALALLKLGQVWEAITSYDQALELQPQDPETWYYRGIAFAVSEQY 582
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ + ++L + + G+ L ++ ++ +A + KA+ +F AW +
Sbjct: 583 TEAIASYNQALELQPDYYEVWIDRGVVLFNLKQWSEAIASWDKALAAQPDFYLAWYNRGV 642
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+L E+A+ Q+ + I F ++ + + L L ++ +AI + L I
Sbjct: 643 ALDNLVRREEAIASYQKAIAIKPDFHLPWYNQAVALFYLERYTEAIVAYDNALQI 697
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 4/200 (2%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G +A AI+ F Q ++ P YPEA + A ++ AI+ + +A++ P E W
Sbjct: 512 GLFAEAIASFSQAIEIHPNYPEAWASKALALLKLGQVWEAITSYDQALELQPQDPETWYY 571
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A A + EAI ++ALE +P+ ++ +RG+V F K ++ A+ +
Sbjct: 572 RGIAFAVSEQYTEAIASYNQALELQPDYYEVWIDRGVVLFNLKQWSEAIASWDKALAAQP 631
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALE 572
+ A+ G+AL ++ ++A ++ KAI + +F W + + FY L +A+
Sbjct: 632 DFYLAWYNRGVALDNLVRREEAIASYQKAIAIKPDFHLPWYNQAVALFY--LERYTEAIV 689
Query: 573 CLQQVLYIDKRFSKAYHLRG 592
L I + +A+ RG
Sbjct: 690 AYDNALQIKLDYWEAWIGRG 709
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 12/209 (5%)
Query: 443 QSNPSA------------GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
Q+NPS +AW +G +A G+ AI +A+E +P S + RG
Sbjct: 412 QANPSPTTTTNPANTAIQAQAWFYQGLQQAKTGDLASAIASYDRAIELQPESYEYWFNRG 471
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ F + F AV + L ++ A+ G L +G + +A + +AI++ N+
Sbjct: 472 LTLFHLERFAEAVAAYDTAIDLKPDHYKAWYNRGGTLGELGLFAEAIASFSQAIEIHPNY 531
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
EAW L +A+ Q L + + + ++ RG+ Q+ +AI +
Sbjct: 532 PEAWASKALALLKLGQVWEAITSYDQALELQPQDPETWYYRGIAFAVSEQYTEAIASYNQ 591
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + P E R + ++ EA+
Sbjct: 592 ALELQPDYYEVWIDRGVVLFNLKQWSEAI 620
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA +Y AI+ ++Q L+ P Y E I RG ++ AI+ + +A+ + P
Sbjct: 572 RGIAFAVSEQYTEAIASYNQALELQPDYYEVWIDRGVVLFNLKQWSEAIASWDKALAAQP 631
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG A L EAI KA+ +P+ + + + F + + A+
Sbjct: 632 DFYLAWYNRGVALDNLVRREEAIASYQKAIAIKPDFHLPWYNQAVALFYLERYTEAIVAY 691
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+++ + A+ G A+ + + + E
Sbjct: 692 DNALQIKLDYWEAWIGRGTAIGHVPDTETLE 722
>gi|425456550|ref|ZP_18836258.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9807]
gi|389802328|emb|CCI18610.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9807]
Length = 707
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 124/246 (50%), Gaps = 3/246 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNP-SAGEAWK 453
+Y A++ +DQ LK +P Y EA G+ A A QR EA I + +AIQ NP SA AW
Sbjct: 347 RYTDALNYYDQALKINPDYLEAFQGKADALLALQRYSEALII-YEKAIQINPDSAWPAWL 405
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RGQA LG++ EA++ + L P ++ + + + + ++AA + L +
Sbjct: 406 GRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQ 465
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ + + G +L ++ +Y+ A +A+ +A+ ++ + W L +ALE
Sbjct: 466 QNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINEALES 525
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + +FS+A++ +G++L LG+ +A++ + + + + + + H +
Sbjct: 526 YSKAGQFNPQFSQAHYSQGIILQKLGRKPEALEAFTQATKANSNYYQAWLHQGALLHQME 585
Query: 634 EYREAV 639
++EA+
Sbjct: 586 RFQEAI 591
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 117/255 (45%), Gaps = 14/255 (5%)
Query: 396 KYASAISIFDQILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+Y+ A+ I+++ ++ +P +P A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALIIYEKAIQINPDSAWP-AWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQ 439
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+ L + A + L K L F+ N A +++G +D+ AV+ + ++
Sbjct: 440 GKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIE 499
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKAL 571
+N + G +L + + +A E++ KA Q + F +A H +Q Q L +AL
Sbjct: 500 SDNALIWYQKGNSLYQLNKINEALESYSKAGQFNPQFSQA--HYSQGIILQKLGRKPEAL 557
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL-------YL 624
E Q + + +A+ +G LLH + + ++AI + E Y
Sbjct: 558 EAFTQATKANSNYYQAWLHQGALLHQMERFQEAIASYEKARRLSSQKAEVFIGIGNAWYR 617
Query: 625 RASCYHAIGEYREAV 639
Y AI Y++A+
Sbjct: 618 LGDNYQAINAYQQAI 632
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 108/262 (41%), Gaps = 34/262 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ F+++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 465 QQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINEALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------L 557
S + + + A+ G+ L +G +A EA +A + + N+ +AW H +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRKPEALEAFTQATKANSNYYQAWLHQGALLHQM 584
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + +A+ EKA + QQ + K + +
Sbjct: 585 ERFQEAIASYEKARRLSSQKAEVFIGIGNAWYRLGDNYQAINAYQQAIQRQKDNPETWKS 644
Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
G LGQ+++AI+ L
Sbjct: 645 LGNSWFKLGQYERAIQAYQESL 666
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 54/116 (46%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G + EAI KA A++ G
Sbjct: 556 ALEAFTQATKANSNYYQAWLHQGALLHQMERFQEAIASYEKARRLSSQKAEVFIGIGNAW 615
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 616 YRLGDNYQAINAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSN 671
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ + + + F T+ +K+
Sbjct: 516 LNKINEALESYSKAGQFNPQFSQAHYSQGII------LQKLGRKPEALEAF--TQATKAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L +G ++ AI+ +++ + E IG G A + AI+
Sbjct: 568 SNYYQAWLHQGALLHQMERFQEAIASYEKARRLSSQKAEVFIGIGNAWYRLGDNYQAINA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDREVQAQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACVKLDKENK 517
+ ++++ + K+D E +
Sbjct: 688 ELQQSLQNQTP--KVDNEEQ 705
>gi|27379691|ref|NP_771220.1| hypothetical protein blr4580 [Bradyrhizobium japonicum USDA 110]
gi|27352843|dbj|BAC49845.1| blr4580 [Bradyrhizobium japonicum USDA 110]
Length = 389
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%)
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+Q+NPS A RG+ G++ A+ DL++A++ +PN A + RGI D +
Sbjct: 67 LQANPSNALALANRGEIFRRKGDAERALADLNRAIDLDPNDAIAWYNRGIAYDDLGDRDH 126
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++L + Y G + +Y +A + +AI+LDR F A+ + Y
Sbjct: 127 AIADYTRAIRLKPNDALYYNNRGNSYIGKNDYARALADYDQAIKLDRTFALAYFNRGTAY 186
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
++ +++AL L + +D + AY R + G+ +A+ D L + P+N
Sbjct: 187 REHGEADRALADLDMAIKLDPNYGPAYGNRARIFRDKGERARALADFGKSLQLTPNNDRD 246
Query: 622 LYLRASCYHAIGEYREAV 639
Y RAS Y +Y A+
Sbjct: 247 AYARASMYFDDHDYARAL 264
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%)
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
+L+ +P AL RG + + E A++D AI +P+ AW RG A LG+
Sbjct: 66 VLQANPSNALALANRGEIFRRKGDAERALADLNRAIDLDPNDAIAWYNRGIAYDDLGDRD 125
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
AI D ++A+ +PN A + RG D+ A+ D +KLD+ AY G A
Sbjct: 126 HAIADYTRAIRLKPNDALYYNNRGNSYIGKNDYARALADYDQAIKLDRTFALAYFNRGTA 185
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
GE +A AI+LD N+ A+G+ + ++D +AL + L + +
Sbjct: 186 YREHGEADRALADLDMAIKLDPNYGPAYGNRARIFRDKGERARALADFGKSLQLTPNNDR 245
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ R + + +A++D + + S R +G+ +EA+
Sbjct: 246 DAYARASMYFDDHDYARALEDYDRAIKANASYAGVFNARCMTRAILGQLQEAL 298
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 6/248 (2%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TR + K + +RG + + + YA A++ +DQ +K D + A RGTA E
Sbjct: 132 TRAIRLKPNDALYYNNRGNSYIGKNDYARALADYDQAIKLDRTFALAYFNRGTAYREHGE 191
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A++D AI+ +P+ G A+ R + GE A+ D K+L+ PN+ + R
Sbjct: 192 ADRALADLDMAIKLDPNYGPAYGNRARIFRDKGERARALADFGKSLQLTPNNDRDAYARA 251
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE---EAHLKAIQLD 547
+ F D+ A+ED +K + + + + +G+ ++A E L+ D
Sbjct: 252 SMYFDDHDYARALEDYDRAIKANASYAGVFNARCMTRAILGQLQEALADCEQSLRMRPGD 311
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
L++ LT Y L N + A+ L A + RGL G A +D
Sbjct: 312 PYTLDSRA-LT--YLKLGNLDAAIADYDTALSAKPELDSALYGRGLAKRRTGDADGAERD 368
Query: 608 LSSGLGID 615
+++ ++
Sbjct: 369 IAAARAVN 376
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 2/255 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +G A++ ++ + DP A RG A + + AI+D+T AI+
Sbjct: 79 NRGEIFRRKGDAERALADLNRAIDLDPNDAIAWYNRGIAYDDLGDRDHAIADYTRAIRLK 138
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ + RG + + A+ D +A++ + A RG + + + A+ D
Sbjct: 139 PNDALYYNNRGNSYIGKNDYARALADYDQAIKLDRTFALAYFNRGTAYREHGEADRALAD 198
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL-DRNFLEAWGHLTQFYQDL 564
L +KLD AY GE +A K++QL N +A+ + ++ D
Sbjct: 199 LDMAIKLDPNYGPAYGNRARIFRDKGERARALADFGKSLQLTPNNDRDAYARASMYFDD- 257
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ +ALE + + + ++ ++ R + LGQ ++A+ D L + P + L
Sbjct: 258 HDYARALEDYDRAIKANASYAGVFNARCMTRAILGQLQEALADCEQSLRMRPGDPYTLDS 317
Query: 625 RASCYHAIGEYREAV 639
RA Y +G A+
Sbjct: 318 RALTYLKLGNLDAAI 332
>gi|296448615|ref|ZP_06890484.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
gi|296253865|gb|EFH01023.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
Length = 285
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RG+A G++ AI+ F Q ++ DP A R A R R +A + DF AI
Sbjct: 78 TRGVAHAKVGQFQEAIADFSQAIQSDPNSAAAFTNRALAFRQIGRSDQARL-DFDRAITV 136
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ R A G EA+ DL A+ P SA H RG+++ K D AV
Sbjct: 137 SPNHAPAYIGRANLLRAQGNLDEALIDLDAAIRLNPESAQAFHARGLIHQKRGDNLRAVT 196
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + D + Y G +L ++G+Y KA E A+ +D AW L Y
Sbjct: 197 DFDNAIDRDPFAAAPYQARGESLVALGKYDKAIEDFNAALNVDNKSAPAWAWLGLAYDRQ 256
Query: 565 ANSEKALECLQQVLYIDK 582
N KA E Q+ L ID
Sbjct: 257 GNRAKAAESYQRALSIDP 274
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
FD+ + P + A IGR Q L+ A+ D AI+ NP + +A+ RG G
Sbjct: 130 FDRAITVSPNHAPAYIGRANLLRAQGNLDEALIDLDAAIRLNPESAQAFHARGLIHQKRG 189
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
+++ A+ D A++ +P +A RG ++ A+ED +A + +D ++ A+ +L
Sbjct: 190 DNLRAVTDFDNAIDRDPFAAAPYQARGESLVALGKYDKAIEDFNAALNVDNKSAPAWAWL 249
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRN 549
GLA G KA E++ +A+ +D N
Sbjct: 250 GLAYDRQGNRAKAAESYQRALSIDPN 275
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 455 RGQARAALGESVEA---IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
RG A +G+ A I+ LS+ + P SA+ + RG+ + K F A+ D S ++
Sbjct: 43 RGFAETEVGDPKAASANIESLSEVIRRNP-SAEAFNTRGVAHAKVGQFQEAIADFSQAIQ 101
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
D + +A+T LA IG +A +AI + N A+ + N ++AL
Sbjct: 102 SDPNSAAAFTNRALAFRQIGRSDQARLDFDRAITVSPNHAPAYIGRANLLRAQGNLDEAL 161
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
L + ++ ++A+H RGL+ G + +A+ D + + DP R A
Sbjct: 162 IDLDAAIRLNPESAQAFHARGLIHQKRGDNLRAVTDFDNAIDRDPFAAAPYQARGESLVA 221
Query: 632 IGEYREAV 639
+G+Y +A+
Sbjct: 222 LGKYDKAI 229
>gi|443313119|ref|ZP_21042732.1| Flp pilus assembly protein TadD [Synechocystis sp. PCC 7509]
gi|442776927|gb|ELR87207.1| Flp pilus assembly protein TadD [Synechocystis sp. PCC 7509]
Length = 296
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
R + AI+D T+AI+ NP++ A+ RG AR G+ AI D +AL+ P + +
Sbjct: 52 RNYKGAIADLTQAIRLNPNSDIAYGYRGNARDDNGDPTGAIADYQQALKINPQNYTTYYN 111
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
I + + +DF AA+ + + ++L+ +AY G + G+ + A + +AI+LD
Sbjct: 112 LAITHERLEDFKAAIANYTKAIELNPSYAAAYENRGNLVDDQGDPQAALADYKQAIRLDP 171
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + Y+ + +++ A+ Q + + + AY+ RG LG + A+KD
Sbjct: 172 KNPSVYYNQGITYRRIKDNQAAISSFNQAIKLKPDYYSAYNSRGNAFASLGDSQAALKDF 231
Query: 609 SSGLGIDPSNIECLYLRASCY 629
L I+P + Y R Y
Sbjct: 232 DRALQINPKAADTYYNRGLLY 252
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 123/249 (49%), Gaps = 5/249 (2%)
Query: 346 SKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAIS 402
++LS+K + + RN K + ++++ ++ + ++ RG A+ + G AI+
Sbjct: 34 TQLSYKDYLEQGIQKYEARNYKGAIADLTQAIRLNPNSDIAYGYRGNARDDNGDPTGAIA 93
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+ Q LK +P + +AAI+++T+AI+ NPS A++ RG
Sbjct: 94 DYQQALKINPQNYTTYYNLAITHERLEDFKAAIANYTKAIELNPSYAAAYENRGNLVDDQ 153
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ A+ D +A+ +P + + + +GI + KD AA+ + +KL + SAY
Sbjct: 154 GDPQAALADYKQAIRLDPKNPSVYYNQGITYRRIKDNQAAISSFNQAIKLKPDYYSAYNS 213
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV--LYI 580
G A +S+G+ + A + +A+Q++ + + + Y +L N++ AL+ QQ LY
Sbjct: 214 RGNAFASLGDSQAALKDFDRALQINPKAADTYYNRGLLYIELKNNQLALKDFQQAASLYK 273
Query: 581 DKRFSKAYH 589
+ +K Y
Sbjct: 274 QQNRTKDYQ 282
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +GI + Y AI+ Q ++ +P A RG AR + AI+D+ +A++
Sbjct: 42 LEQGIQKYEARNYKGAIADLTQAIRLNPNSDIAYGYRGNARDDNGDPTGAIADYQQALKI 101
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + L + AI + +KA+E P+ A RG + D AA+
Sbjct: 102 NPQNYTTYYNLAITHERLEDFKAAIANYTKAIELNPSYAAAYENRGNLVDDQGDPQAALA 161
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++LD +N S Y G+ I + + A + +AI+L ++ A+ + L
Sbjct: 162 DYKQAIRLDPKNPSVYYNQGITYRRIKDNQAAISSFNQAIKLKPDYYSAYNSRGNAFASL 221
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+S+ AL+ + L I+ + + Y+ RGLL L ++ A+KD
Sbjct: 222 GDSQAALKDFDRALQINPKAADTYYNRGLLYIELKNNQLALKDF 265
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 79/172 (45%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI DL++A+ PNS RG D A+ D +K++ +N + Y L +
Sbjct: 57 AIADLTQAIRLNPNSDIAYGYRGNARDDNGDPTGAIADYQQALKINPQNYTTYYNLAITH 116
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ ++K A + KAI+L+ ++ A+ + D + + AL +Q + +D +
Sbjct: 117 ERLEDFKAAIANYTKAIELNPSYAAAYENRGNLVDDQGDPQAALADYKQAIRLDPKNPSV 176
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y+ +G+ + ++ AI + + + P R + + ++G+ + A+
Sbjct: 177 YYNQGITYRRIKDNQAAISSFNQAIKLKPDYYSAYNSRGNAFASLGDSQAAL 228
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
E+GI ++ +++ A+ DL+ ++L+ + AY Y G A G+ A + +A++++
Sbjct: 43 EQGIQKYEARNYKGAIADLTQAIRLNPNSDIAYGYRGNARDDNGDPTGAIADYQQALKIN 102
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ +L ++ L + + A+ + + ++ ++ AY RG L+ G + A+ D
Sbjct: 103 PQNYTTYYNLAITHERLEDFKAAIANYTKAIELNPSYAAAYENRGNLVDDQGDPQAALAD 162
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +DP N Y + Y I + + A+
Sbjct: 163 YKQAIRLDPKNPSVYYNQGITYRRIKDNQAAI 194
>gi|434404736|ref|YP_007147621.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
gi|428258991|gb|AFZ24941.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
Length = 279
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 114/226 (50%), Gaps = 13/226 (5%)
Query: 365 NKKFCVTRISKSK--------SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
NK VT + S + + DF + +G Q G +AI+ + + + +P Y
Sbjct: 36 NKDVLVTEVGVSPPNRRTAKTTKAGDFYI-QGQNQHARGNSQAAIAAYSKAISLNPRYAP 94
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A RG A E AI+D+++A++ NP+ EA+ RG ARA+LG++ AI D ++A+
Sbjct: 95 AFRSRGLAYFDIGNKEGAIADYSQALRLNPNDAEAFNNRGNARASLGDNKTAIADYNEAI 154
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
PN A+ + RG D N A++D + + LD + AY G A ++ G+ + A
Sbjct: 155 RLAPNYAEAFNNRGNARATQGDKNGALDDYNQAILLDPKYTIAYNNRGNARAAKGDPQGA 214
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK--ALECLQQVLYI 580
+ +A++L+ NF A+ + AN +K AL+ LQ+ I
Sbjct: 215 IADYNEAVRLNPNFGPAYNNRGN--ARAANKDKMGALQDLQRAAAI 258
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+GQ + A G S AI SKA+ P A RG+ F + A+ D S ++L+
Sbjct: 65 QGQNQHARGNSQAAIAAYSKAISLNPRYAPAFRSRGLAYFDIGNKEGAIADYSQALRLNP 124
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ G A +S+G+ K A + +AI+L N+ EA+ + + AL+
Sbjct: 125 NDAEAFNNRGNARASLGDNKTAIADYNEAIRLAPNYAEAFNNRGNARATQGDKNGALDDY 184
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
Q + +D +++ AY+ RG G + AI D + + ++P+
Sbjct: 185 NQAILLDPKYTIAYNNRGNARAAKGDPQGAIADYNEAVRLNPN 227
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ +G A+ ++Q + DP Y A RG ARA + + + AI+D+ EA++ N
Sbjct: 166 NRGNARATQGDKNGALDDYNQAILLDPKYTIAYNNRGNARAAKGDPQGAIADYNEAVRLN 225
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFK 495
P+ G A+ RG ARAA + + A+QDL +A F+ D L+++ + N +
Sbjct: 226 PNFGPAYNNRGNARAANKDKMGALQDLQRAAAIFQKEGNDDLYQQVMKNIQ 276
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI+ +++AI NP A++ RG A +G AI D S+AL PN A+ + RG
Sbjct: 76 QAAIAAYSKAISLNPRYAPAFRSRGLAYFDIGNKEGAIADYSQALRLNPNDAEAFNNRGN 135
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D A+ D + ++L A+ G A ++ G+ A + + +AI LD +
Sbjct: 136 ARASLGDNKTAIADYNEAIRLAPNYAEAFNNRGNARATQGDKNGALDDYNQAILLDPKYT 195
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
A+ + + + A+ + + ++ F AY+ RG
Sbjct: 196 IAYNNRGNARAAKGDPQGAIADYNEAVRLNPNFGPAYNNRG 236
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G + A A+ KAI L+ + A+ Y D+ N E A+ Q L ++ ++A++
Sbjct: 73 GNSQAAIAAYSKAISLNPRYAPAFRSRGLAYFDIGNKEGAIADYSQALRLNPNDAEAFNN 132
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY-------HAIGEYREAVI 640
RG LG +K AI D + + + P+ E R + A+ +Y +A++
Sbjct: 133 RGNARASLGDNKTAIADYNEAIRLAPNYAEAFNNRGNARATQGDKNGALDDYNQAIL 189
>gi|392411116|ref|YP_006447723.1| putative N-acetylglucosaminyl transferase [Desulfomonile tiedjei
DSM 6799]
gi|390624252|gb|AFM25459.1| putative N-acetylglucosaminyl transferase [Desulfomonile tiedjei
DSM 6799]
Length = 513
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++ ++L DP A RG A + + E A +DF +A+Q +P EA+ RG+
Sbjct: 47 AIQLYSKVLGSDPNNARAYFNRGAAYRSKGQNEKAFADFNQAVQKDPGLAEAFFARGEYY 106
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+A+QD S+ L + + +G F AA+ DL ++ + ++ A
Sbjct: 107 RQRSMFDKAVQDFSRTLTINKDYPGVHRVKGEAELGLGQFQAAISDLDIALRSNADDSDA 166
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G+A ++ + +AI+L+ +A L +E+AL+ +VL
Sbjct: 167 YFLRGVAHQNLKSLAASLSDFNRAIELNPQNTKALFKLGNILFSEGKTEQALDAYNRVLK 226
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
+D + A RG GLG ++ AI+DL+ L I+P L RA Y
Sbjct: 227 LDPKNVDALTNRGWAKRGLGDYQGAIEDLTQSLKINPKLALALSNRAQLY 276
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 131/330 (39%), Gaps = 75/330 (22%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-----------TARAFQREL-- 431
+RG A ++G+ A + F+Q +++DP EA RG + F R L
Sbjct: 66 FNRGAAYRSKGQNEKAFADFNQAVQKDPGLAEAFFARGEYYRQRSMFDKAVQDFSRTLTI 125
Query: 432 ---------------------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+AAISD A++SN +A+ RG A L ++
Sbjct: 126 NKDYPGVHRVKGEAELGLGQFQAAISDLDIALRSNADDSDAYFLRGVAHQNLKSLAASLS 185
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++A+E P + L + G + F A++ + +KLD +N A T G A +
Sbjct: 186 DFNRAIELNPQNTKALFKLGNILFSEGKTEQALDAYNRVLKLDPKNVDALTNRGWAKRGL 245
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+Y+ A E ++++++ A + Q Y + A+ Q+L I
Sbjct: 246 GDYQGAIEDLTQSLKINPKLALALSNRAQLYTQTNRIDAAVADYTQLLSIKGADPGILFA 305
Query: 591 RGLLLHGL----------------------------------GQHKKAIKDLSSGLGIDP 616
RG LL L ++ +AI DL+S L IDP
Sbjct: 306 RGKLLLELKKPAEAETDFTRALQDEPDRPEILEYRARARLMAKKYNEAIADLNSILKIDP 365
Query: 617 SNIECLYLRASCY-------HAIGEYREAV 639
+++E L RA + AI +YREA+
Sbjct: 366 ADVEALLARAQAHEAESHYNEAIADYREAI 395
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 4/258 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
R+ K +VD +RG A+ G Y AI Q LK +P AL R
Sbjct: 220 AYNRVLKLDPKNVDALTNRGWAKRGLGDYQGAIEDLTQSLKINPKLALALSNRAQLYTQT 279
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++AA++D+T+ + + RG+ L + EA D ++AL+ EP+ +IL
Sbjct: 280 NRIDAAVADYTQLLSIKGADPGILFARGKLLLELKKPAEAETDFTRALQDEPDRPEILEY 339
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD- 547
R K +N A+ DL++ +K+D + A A + Y +A + +AI+LD
Sbjct: 340 RARARLMAKKYNEAIADLNSILKIDPADVEALLARAQAHEAESHYNEAIADYREAIRLDA 399
Query: 548 -RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +EA L + + ++A+ +V+ ++ A+ RG+ L G A +
Sbjct: 400 EKAGVEAQYGLAKNFLMNNQLDQAITQFSKVIELEPSHGLAWANRGVALKQKGDLASAAE 459
Query: 607 DLSSGLGI--DPSNIECL 622
D L +PS + +
Sbjct: 460 DFRKALMYLKEPSRLTAV 477
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ + A++ S + D N AY G A S G+ +KA +A+Q D EA+
Sbjct: 43 NLDKAIQLYSKVLGSDPNNARAYFNRGAAYRSKGQNEKAFADFNQAVQKDPGLAEAFFAR 102
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++Y+ + +KA++ + L I+K + + ++G GLGQ + AI DL L +
Sbjct: 103 GEYYRQRSMFDKAVQDFSRTLTINKDYPGVHRVKGEAELGLGQFQAAISDLDIALRSNAD 162
Query: 618 NIECLYLRASCYH 630
+ + +LR +
Sbjct: 163 DSDAYFLRGVAHQ 175
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
N +KA++ +VL D ++AY RG GQ++KA D + + DP E + R
Sbjct: 43 NLDKAIQLYSKVLGSDPNNARAYFNRGAAYRSKGQNEKAFADFNQAVQKDPGLAEAFFAR 102
Query: 626 ASCYHAIGEYREAV 639
Y + +AV
Sbjct: 103 GEYYRQRSMFDKAV 116
>gi|146094076|ref|XP_001467149.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134071513|emb|CAM70202.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 847
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 1/259 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF +RG Q +G YA+AI+ + + DP + ++ R + E A++D+ A
Sbjct: 512 DFFHNRGFTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAA 571
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+Q + A+ RG A A LG A+++ + AL P L+ RG+V + + ++
Sbjct: 572 LQIDSGNANAYHNRGAALAKLGRLEAAVENFNCALRLSPKLTFALNARGLVYDQLQQYDK 631
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++LD+ N G ++GE + A + +I+L + A+ + +
Sbjct: 632 ALADFTEAIRLDQRNPVWLHNRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAF 691
Query: 562 QDLANSEKALECLQQVLYIDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+ L E A+E + L +K + R L + A++D + L DP N
Sbjct: 692 RKLGRYEAAIEDYTRALREHPGVATKVLNNRAYCFARLNLFEDAVRDYTEVLATDPVNAH 751
Query: 621 CLYLRASCYHAIGEYREAV 639
LY R + G+Y A
Sbjct: 752 ALYNRGISFEKCGKYNAAA 770
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 115/295 (38%), Gaps = 34/295 (11%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
++ + RG+ G+ +AI ++ + L+ P + +AL R + AI D+
Sbjct: 407 LNAHYFYQRGLEHRRRGELEAAIHMYTRALELSPTHFKALFNRAFCEDKLKNYTRAIEDY 466
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK--- 495
T A+ +P G + G A+Q ++A+E + D H RG K
Sbjct: 467 TAALDLDPRNPFTHYNLGISYDHKGRHARAMQAFTRAIELDDRHPDFFHNRGFTQRKQGA 526
Query: 496 ------------------FKD-------------FNAAVEDLSACVKLDKENKSAYTYLG 524
FK + AV D +A +++D N +AY G
Sbjct: 527 YAAAIADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRG 586
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
AL+ +G + A E A++L A Y L +KAL + + +D+R
Sbjct: 587 AALAKLGRLEAAVENFNCALRLSPKLTFALNARGLVYDQLQQYDKALADFTEAIRLDQRN 646
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
H RG +G+ + AI D S+ + + P + RA + +G Y A+
Sbjct: 647 PVWLHNRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAFRKLGRYEAAI 701
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 8/168 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+RG N G+ AI+ + +K P A R A AF++ EAAI D+T A++
Sbjct: 652 NRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNR--AFAFRKLGRYEAAIEDYTRALR 709
Query: 444 SNPS-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+P A + R A L +A++D ++ L +P +A L+ RGI K +NAA
Sbjct: 710 EHPGVATKVLNNRAYCFARLNLFEDAVRDYTEVLATDPVNAHALYNRGISFEKCGKYNAA 769
Query: 503 VEDLSACVKLDKE---NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+D + ++L E S+Y G + + + +A E +A++LD
Sbjct: 770 ADDFTRAIRLAPEVPSTASSYYSRGTSRLQLHQVPQAAEDLKQALKLD 817
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE--------------DPMYPEALIGRGTARAFQR 429
RL R A V YASA + D ++E D + EAL RG RA
Sbjct: 49 RLLRAKAYVQLHDYASACADLDDWIQEIDRTAHGISAGAAADSL-TEALFYRGVCRARLS 107
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
+++ A++DFTE +Q P A R A L + AI D AL+ +
Sbjct: 108 QVKDAVADFTEVLQRKPGHRRAHYERAACHAQLDDFFNAIADYEAALQLD 157
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
NRA+C+S+L ++ + D ALQ+D AY +G A + LGR E A+
Sbjct: 550 NRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRGAALAKLGRLEAAV 599
>gi|431808188|ref|YP_007235086.1| hypothetical protein BPP43_08170 [Brachyspira pilosicoli P43/6/78]
gi|430781547|gb|AGA66831.1| TPR repeat-containing protein [Brachyspira pilosicoli P43/6/78]
Length = 686
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 6/249 (2%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
E K+ AI + ++ +++D E +GR + + E AI D+ AI+ N + +
Sbjct: 15 EKKFEEAIKLSNEAIEKDNKNYELYVGRASLKNVIGLYEDAIKDYNIAIELNNKDPKIYW 74
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+RG ++ L + AI+D A++ N+ I +RG++ D A+ D + +KL+
Sbjct: 75 QRGYIKSILIDYKGAIEDFDTAIKLGINAPRIFLDRGVIKSNLHDHTDAINDFNIAIKLN 134
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKA 570
AY + L+ +G Y+ + AI+L+ N+ A+ G L F L N ++A
Sbjct: 135 PYYAEAYNFRALSKIELGLYEDSNSDFNTAIKLNPNYYFAYTNRGLLNLF---LKNYDQA 191
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
L+ L IDK +Y R + + LG ++ AIKD + + I + ++ Y++
Sbjct: 192 LKDYDYALKIDKNSIISYRYRAQIKYILGMYEDAIKDAENAINIYNNYMDAHYIKILSKA 251
Query: 631 AIGEYREAV 639
+ Y E +
Sbjct: 252 KLKRYIEII 260
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 102/215 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI ++ ++ + P+ RG ++ + + AI DF AI+ +A +
Sbjct: 50 GLYEDAIKDYNIAIELNNKDPKIYWQRGYIKSILIDYKGAIEDFDTAIKLGINAPRIFLD 109
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG ++ L + +AI D + A++ P A+ + R + + + + D + +KL+
Sbjct: 110 RGVIKSNLHDHTDAINDFNIAIKLNPYYAEAYNFRALSKIELGLYEDSNSDFNTAIKLNP 169
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
AYT GL + Y +A + + A+++D+N + ++ + Q L E A++
Sbjct: 170 NYYFAYTNRGLLNLFLKNYDQALKDYDYALKIDKNSIISYRYRAQIKYILGMYEDAIKDA 229
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ + I + A++++ L L ++ + I DL+
Sbjct: 230 ENAINIYNNYMDAHYIKILSKAKLKRYIEIIDDLN 264
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 63/127 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R ++++ G Y + S F+ +K +P Y A RG F + + A+ D+ A++ +
Sbjct: 144 RALSKIELGLYEDSNSDFNTAIKLNPNYYFAYTNRGLLNLFLKNYDQALKDYDYALKIDK 203
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ +++ R Q + LG +AI+D A+ N D + + + K K + ++DL
Sbjct: 204 NSIISYRYRAQIKYILGMYEDAIKDAENAINIYNNYMDAHYIKILSKAKLKRYIEIIDDL 263
Query: 507 SACVKLD 513
+ K++
Sbjct: 264 NIVAKIN 270
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG+ + N + AI+ F+ +K +P Y EA R ++ E + SDF AI+
Sbjct: 108 LDRGVIKSNLHDHTDAINDFNIAIKLNPYYAEAYNFRALSKIELGLYEDSNSDFNTAIKL 167
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG L +A++D AL+ + NS R + + + A++
Sbjct: 168 NPNYYFAYTNRGLLNLFLKNYDQALKDYDYALKIDKNSIISYRYRAQIKYILGMYEDAIK 227
Query: 505 DLSACVKL 512
D + +
Sbjct: 228 DAENAINI 235
>gi|225620792|ref|YP_002722050.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215612|gb|ACN84346.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 605
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
NEG A+ +++ ++ +P Y E RG + + +E +I D+ +AIQ NP+ EA+
Sbjct: 374 NEG----ALEDYNKAIQLNPNYSEVYNNRGNVKIYLGNMEESIKDYNKAIQLNPNYSEAY 429
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG + L ++ A++D +KA+E PN +++ + RG + KD A+ED ++L
Sbjct: 430 NNRGLLKRQLKDNEGALEDYNKAIELNPNLSEVYNNRGTIKEILKDNEGALEDYDKAIEL 489
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + Y G A +++G A AI+L+ N++EA+
Sbjct: 490 NPNDSEFYYNRGTAKTNLGNIDGAVVDFDNAIELNPNYVEAY 531
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 114/238 (47%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A+ Y AI ++ ++ +P + A G +E + +++ F +I N
Sbjct: 297 GTAKYELKIYDEAIEYLNKAIELNPYHSGAYNNLGLVYYAIKEYDKSLNYFNYSISLNNK 356
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + RG + L ++ A++D +KA++ PN +++ + RG V + +++D +
Sbjct: 357 EPKTYNNRGICKEKLKDNEGALEDYNKAIQLNPNYSEVYNNRGNVKIYLGNMEESIKDYN 416
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ AY GL + + + A E + KAI+L+ N E + + + L ++
Sbjct: 417 KAIQLNPNYSEAYNNRGLLKRQLKDNEGALEDYNKAIELNPNLSEVYNNRGTIKEILKDN 476
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E ALE + + ++ S+ Y+ RG LG A+ D + + ++P+ +E + R
Sbjct: 477 EGALEDYDKAIELNPNDSEFYYNRGTAKTNLGNIDGAVVDFDNAIELNPNYVEAYFNR 534
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 106/227 (46%)
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y A GTA+ + + AI +AI+ NP A+ G A+ E +++ +
Sbjct: 289 YAGAFYNIGTAKYELKIYDEAIEYLNKAIELNPYHSGAYNNLGLVYYAIKEYDKSLNYFN 348
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
++ + RGI K KD A+ED + ++L+ Y G +G
Sbjct: 349 YSISLNNKEPKTYNNRGICKEKLKDNEGALEDYNKAIQLNPNYSEVYNNRGNVKIYLGNM 408
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+++ + + KAIQL+ N+ EA+ + + L ++E ALE + + ++ S+ Y+ RG
Sbjct: 409 EESIKDYNKAIQLNPNYSEAYNNRGLLKRQLKDNEGALEDYNKAIELNPNLSEVYNNRGT 468
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ L ++ A++D + ++P++ E Y R + +G AV+
Sbjct: 469 IKEILKDNEGALEDYDKAIELNPNDSEFYYNRGTAKTNLGNIDGAVV 515
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
NEG A+ +++ ++ +P E RGT + ++ E A+ D+ +AI+ NP+ E +
Sbjct: 442 NEG----ALEDYNKAIELNPNLSEVYNNRGTIKEILKDNEGALEDYDKAIELNPNDSEFY 497
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
RG A+ LG A+ D A+E PN + R I
Sbjct: 498 YNRGTAKTNLGNIDGAVVDFDNAIELNPNYVEAYFNRYI 536
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 34/171 (19%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK----- 535
N A + G ++ K ++ A+E L+ ++L+ + AY LGL +I EY K
Sbjct: 288 NYAGAFYNIGTAKYELKIYDEAIEYLNKAIELNPYHSGAYNNLGLVYYAIKEYDKSLNYF 347
Query: 536 -----------------------------AEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A E + KAIQL+ N+ E + + L N
Sbjct: 348 NYSISLNNKEPKTYNNRGICKEKLKDNEGALEDYNKAIQLNPNYSEVYNNRGNVKIYLGN 407
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
E++++ + + ++ +S+AY+ RGLL L ++ A++D + + ++P+
Sbjct: 408 MEESIKDYNKAIQLNPNYSEAYNNRGLLKRQLKDNEGALEDYNKAIELNPN 458
>gi|334120282|ref|ZP_08494363.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333456629|gb|EGK85259.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 406
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 115/239 (48%), Gaps = 1/239 (0%)
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+ +++ P+ E G +A + + E A+ +F AI+ NP +A+ R R L
Sbjct: 136 LLERVRSNSPLCAEDFNKLGIKKAEEGDFEGALENFDRAIKLNPDYADAYNNRASVRHEL 195
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ AI+D +KA+ P+ A + GI+++ D+ A D + +L+ + AY
Sbjct: 196 GDDAGAIEDYTKAILLNPDRAVYHNNLGIISYNSDDYRGAQADHTRATQLNAGDAQAYNN 255
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ-FYQDLANSEKALECLQQVLYID 581
G A +G+ + A + +AI+L+ + AW + ++ L + KAL+ Q ++
Sbjct: 256 RGFARLRLGDLQGALKDFTQAIELNAHDALAWNNRGDVYFLKLGDMPKALDDYTQAARLN 315
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
K ++ G++ LG +KA++D + + + E R ++ +G+ ++A +
Sbjct: 316 PNNPKTFYYLGVIHSRLGNKEKALEDFTKAIELKRDFAEAYQNRGIVHYELGDSQKANV 374
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + EG + A+ FD+ +K +P Y +A R + R + AI D+T+AI NP
Sbjct: 155 GIKKAEEGDFEGALENFDRAIKLNPDYADAYNNRASVRHELGDDAGAIEDYTKAILLNPD 214
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
G + A D ++A + A + RG + D A++D +
Sbjct: 215 RAVYHNNLGIISYNSDDYRGAQADHTRATQLNAGDAQAYNNRGFARLRLGDLQGALKDFT 274
Query: 508 ACVKLDKENKSAYTYLG-LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ + A+ G + +G+ KA + + +A +L+ N + + +L + L N
Sbjct: 275 QAIELNAHDALAWNNRGDVYFLKLGDMPKALDDYTQAARLNPNNPKTFYYLGVIHSRLGN 334
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
EKALE + + + + F++AY RG++ + LG +KA D
Sbjct: 335 KEKALEDFTKAIELKRDFAEAYQNRGIVHYELGDSQKANVDF 376
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQS 444
+RG A++ G A+ F Q ++ + A RG + ++ A+ D+T+A +
Sbjct: 255 NRGFARLRLGDLQGALKDFTQAIELNAHDALAWNNRGDVYFLKLGDMPKALDDYTQAARL 314
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ + + G + LG +A++D +KA+E + + A+ RGIV+++ D A
Sbjct: 315 NPNNPKTFYYLGVIHSRLGNKEKALEDFTKAIELKRDFAEAYQNRGIVHYELGDSQKANV 374
Query: 505 DL 506
D
Sbjct: 375 DF 376
>gi|296127341|ref|YP_003634593.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019157|gb|ADG72394.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 750
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 137/286 (47%), Gaps = 15/286 (5%)
Query: 363 KRNKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
KRN + + +K+ ++ ++ G++ Y AI +++ L+ + Y A I
Sbjct: 361 KRNYEEAIKNFNKALELNTSMDMAYYNIGLSYYEMHDYEKAIEYYNKALEINTQYSAAYI 420
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
G + AI+ + A++ NP+ ++ A +L + +A++D + ALE
Sbjct: 421 NLGLIEHNFGNYQEAINYYKRALEINPNYSLSYYNIALAEMSLEDYDKALEDFNHALELG 480
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
N ADI G++ + ++ A+E + ++++ +AY + LS++ +YK+A E
Sbjct: 481 YNEADIYTNIGLIYSREAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKYKEALEI 540
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQD------LANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ K I++ G+ +Y+ ++ E+A+ ++ ++ + AY+ RG
Sbjct: 541 YDKVIRM------YPGNFDVYYERGYTKYRVSKYEEAIRDFDIIINVNSKHYNAYYYRGC 594
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L + +AIKD + +P+N + +ASCY + +YRE++
Sbjct: 595 SKKYLKNYDEAIKDFDKAIEYNPNNPDYYSEKASCYDYLNKYRESI 640
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 102/218 (46%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G ++R E AI +F +A++ N S A+ G + + + +AI+ +KALE
Sbjct: 355 GLVYHYKRNYEEAIKNFNKALELNTSMDMAYYNIGLSYYEMHDYEKAIEYYNKALEINTQ 414
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ G++ F ++ A+ ++++ +Y + LA S+ +Y KA E
Sbjct: 415 YSAAYINLGLIEHNFGNYQEAINYYKRALEINPNYSLSYYNIALAEMSLEDYDKALEDFN 474
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
A++L N + + ++ Y A +KA+E +VL I+ AY+ L + ++
Sbjct: 475 HALELGYNEADIYTNIGLIYSREAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKY 534
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
K+A++ + + P N + Y R + + +Y EA+
Sbjct: 535 KEALEIYDKVIRMYPGNFDVYYERGYTKYRVSKYEEAI 572
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 94/184 (51%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+S +A+Q +P+ + + + + ALG+ A+ L K LE + I +E ++
Sbjct: 265 ALSYLEKALQISPNNADTYFKIFLIKRALGDYDGALSCLEKILEIDDTDVAIYNEIALIK 324
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ + + A+ L+ + +D N Y +GL Y++A + KA++L+ + A
Sbjct: 325 IELELYEEALYYLNKALCIDNNNAEIYNTIGLVYHYKRNYEEAIKNFNKALELNTSMDMA 384
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ ++ Y ++ + EKA+E + L I+ ++S AY GL+ H G +++AI L
Sbjct: 385 YYNIGLSYYEMHDYEKAIEYYNKALEINTQYSAAYINLGLIEHNFGNYQEAINYYKRALE 444
Query: 614 IDPS 617
I+P+
Sbjct: 445 INPN 448
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 4/262 (1%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S D +RG+A++N Y AI FD+ ++ + RG A+ + + AI DF
Sbjct: 41 SYDLYHNRGLAKLNLRLYEGAIKDFDRAIELGDY--NSYYERGLAKFYMAFYKEAIEDFN 98
Query: 440 EAIQSNPS--AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ ++ + S A A+ G + L E EA++ +KA+E PN H ++
Sbjct: 99 KVVELDKSSAASFAYNTIGLCKYNLNEFDEALKYYNKAIETNPNLIIAYHNIALLKHSMG 158
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ L+ +++D N Y + +G ++A E K +++ + L + +
Sbjct: 159 LDDEALSYLNKALEIDTNNIETYLKIYSIKLGLGLEREANEYLDKIMEMYPDDLYIYDRI 218
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
D E++LE L++ L I+ F AY+ LH L + +A+ L L I P+
Sbjct: 219 GNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLNLNDEALSYLEKALQISPN 278
Query: 618 NIECLYLRASCYHAIGEYREAV 639
N + + A+G+Y A+
Sbjct: 279 NADTYFKIFLIKRALGDYDGAL 300
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 14/211 (6%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L+ + ++ E AI + I N + + + RG A+ L AI+D +A
Sbjct: 9 EELLNKAKESFENKDYEKAIEYIDKVIFYNGDSYDLYHNRGLAKLNLRLYEGAIKDFDRA 68
Query: 476 LEF-EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY--LGLALSSIGE 532
+E + NS +ERG+ F + A+ED + V+LDK + +++ Y +GL ++ E
Sbjct: 69 IELGDYNS---YYERGLAKFYMAFYKEAIEDFNKVVELDKSSAASFAYNTIGLCKYNLNE 125
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID----KRFSKAY 588
+ +A + + KAI+ + N + A+ ++ + ++AL L + L ID + + K Y
Sbjct: 126 FDEALKYYNKAIETNPNLIIAYHNIALLKHSMGLDDEALSYLNKALEIDTNNIETYLKIY 185
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
++ GLG ++A + L + + P ++
Sbjct: 186 SIKL----GLGLEREANEYLDKIMEMYPDDL 212
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 99/217 (45%), Gaps = 14/217 (6%)
Query: 369 CVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ ++ I+ ++ LS +A+++ Y A+ F+ L + Y EA I
Sbjct: 435 AINYYKRALEINPNYSLSYYNIALAEMSLEDYDKALEDFNHAL--ELGYNEADIYTNIGL 492
Query: 426 AFQRE--LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
+ RE + AI + + ++ NP+ A+ + + + EA++ K + P +
Sbjct: 493 IYSREAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKYKEALEIYDKVIRMYPGNF 552
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
D+ +ERG ++ + A+ D + ++ ++ +AY Y G + + Y +A + KA
Sbjct: 553 DVYYERGYTKYRVSKYEEAIRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDEAIKDFDKA 612
Query: 544 IQLDRNFLEAWG-------HLTQFYQDLANSEKALEC 573
I+ + N + + +L ++ + + N +KA+E
Sbjct: 613 IEYNPNNPDYYSEKASCYDYLNKYRESIENYDKAIEL 649
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%)
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + R G + G E+++ L KALE PN D ++ K + A+
Sbjct: 209 PDDLYIYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLNLNDEALSY 268
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L +++ N Y + L ++G+Y A K +++D + + + +L
Sbjct: 269 LEKALQISPNNADTYFKIFLIKRALGDYDGALSCLEKILEIDDTDVAIYNEIALIKIELE 328
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+AL L + L ID ++ Y+ GL+ H +++AIK+ + L ++ S Y
Sbjct: 329 LYEEALYYLNKALCIDNNNAEIYNTIGLVYHYKRNYEEAIKNFNKALELNTSMDMAYYNI 388
Query: 626 ASCYHAIGEYREAV 639
Y+ + +Y +A+
Sbjct: 389 GLSYYEMHDYEKAI 402
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 118/273 (43%), Gaps = 7/273 (2%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V + KS + S + + G+ + N ++ A+ +++ ++ +P +I +
Sbjct: 100 VVELDKSSAASFAYN-TIGLCKYNLNEFDEALKYYNKAIETNP---NLIIAYHNIALLKH 155
Query: 430 EL---EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ + A+S +A++ + + E + + + LG EA + L K +E P+ I
Sbjct: 156 SMGLDDEALSYLNKALEIDTNNIETYLKIYSIKLGLGLEREANEYLDKIMEMYPDDLYIY 215
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
G + ++E L ++++ AY + AL + +A KA+Q+
Sbjct: 216 DRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLNLNDEALSYLEKALQI 275
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
N + + + + L + + AL CL+++L ID Y+ L+ L +++A+
Sbjct: 276 SPNNADTYFKIFLIKRALGDYDGALSCLEKILEIDDTDVAIYNEIALIKIELELYEEALY 335
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L+ L ID +N E YH Y EA+
Sbjct: 336 YLNKALCIDNNNAEIYNTIGLVYHYKRNYEEAI 368
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/168 (19%), Positives = 73/168 (43%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D + G+ E Y AI ++++L+ +P A + + + A+ + +
Sbjct: 485 DIYTNIGLIYSREAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKYKEALEIYDKV 544
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ P + + RG + + + EAI+D + + + RG K+++
Sbjct: 545 IRMYPGNFDVYYERGYTKYRVSKYEEAIRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDE 604
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
A++D ++ + N Y+ + +Y+++ E + KAI+L+ N
Sbjct: 605 AIKDFDKAIEYNPNNPDYYSEKASCYDYLNKYRESIENYDKAIELNDN 652
>gi|217978527|ref|YP_002362674.1| peptidase C14 caspase catalytic subunit p20 [Methylocella
silvestris BL2]
gi|217503903|gb|ACK51312.1| peptidase C14 caspase catalytic subunit p20 [Methylocella
silvestris BL2]
Length = 778
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 8/267 (2%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S+D +RG+A+ EG Y +I+ ++Q ++ D P+ RG A + E + AI+D+
Sbjct: 96 SIDAYRNRGLARQIEGDYDGSIADYNQAIRIDAKSPDLYNSRGAALVNKGEYDRAIADYD 155
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ N +A+ RGQAR + AI D + ++ PN A +R D
Sbjct: 156 KAIRLNGKFAKAFYNRGQARYLKNQPDRAIADFDEFIKLSPNEAKGYVQRADARLAKADV 215
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D + +K+D N A+++ G A G+ +K+ KAI+L E++ +
Sbjct: 216 LGAIADYDSAIKVDGGNGEAFSHRGEARRLQGDLEKSLLDQNKAIELAAT-PESYVNRAL 274
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
Y D + A+ + L + ++ A+ RG + G + A+ DL+ L IDP
Sbjct: 275 VYADQGKLDLAIADCDEALLLRPKYDLAFAQRGRVKRLSGDLEGALGDLNKALSIDPRLP 334
Query: 620 ECLYLRASCY-------HAIGEYREAV 639
L R + AI ++ EA+
Sbjct: 335 VSLSFRGDVFLARDSSDRAIADFTEAL 361
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 61/112 (54%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P L RG A+ + +LE AI+DF+ A+ NP++ +A++ RG AR G+ +I D ++
Sbjct: 63 PGLLNNRGVAKVRKGDLEGAIADFSRALDRNPNSIDAYRNRGLARQIEGDYDGSIADYNQ 122
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
A+ + S D+ + RG +++ A+ D ++L+ + A+ G A
Sbjct: 123 AIRIDAKSPDLYNSRGAALVNKGEYDRAIADYDKAIRLNGKFAKAFYNRGQA 174
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
PE+ + R A Q +L+ AI+D EA+ P A+ +RG+ + G+ A+ DL+K
Sbjct: 266 PESYVNRALVYADQGKLDLAIADCDEALLLRPKYDLAFAQRGRVKRLSGDLEGALGDLNK 325
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
AL +P L RG V + A+ D + +++ + +AY G A G+
Sbjct: 326 ALSIDPRLPVSLSFRGDVFLARDSSDRAIADFTEALRVAPDFVAAYAGRGQAYEKAGQLP 385
Query: 535 KAEEAHLKAIQL 546
KA+ + KA+ L
Sbjct: 386 KAKADYQKALSL 397
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 101/266 (37%), Gaps = 67/266 (25%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S D SRG A VN+G+Y AI+ +D+ ++ + + +A RG AR + + + AI+DF
Sbjct: 130 SPDLYNSRGAALVNKGEYDRAIADYDKAIRLNGKFAKAFYNRGQARYLKNQPDRAIADFD 189
Query: 440 EAIQSNPSA----------------------------------GEAWKRRGQARAALGE- 464
E I+ +P+ GEA+ RG+AR G+
Sbjct: 190 EFIKLSPNEAKGYVQRADARLAKADVLGAIADYDSAIKVDGGNGEAFSHRGEARRLQGDL 249
Query: 465 ---------SVE-----------------------AIQDLSKALEFEPNSADILHERGIV 492
++E AI D +AL P +RG V
Sbjct: 250 EKSLLDQNKAIELAATPESYVNRALVYADQGKLDLAIADCDEALLLRPKYDLAFAQRGRV 309
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
D A+ DL+ + +D + ++ G + +A +A+++ +F+
Sbjct: 310 KRLSGDLEGALGDLNKALSIDPRLPVSLSFRGDVFLARDSSDRAIADFTEALRVAPDFVA 369
Query: 553 AWGHLTQFYQDLANSEKALECLQQVL 578
A+ Q Y+ KA Q+ L
Sbjct: 370 AYAGRGQAYEKAGQLPKAKADYQKAL 395
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 72/168 (42%), Gaps = 7/168 (4%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
E + +L+ RG+ + D A+ D S + + + AY GLA G+Y +
Sbjct: 59 EAATPGLLNNRGVAKVRKGDLEGAIADFSRALDRNPNSIDAYRNRGLARQIEGDYDGSIA 118
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ +AI++D + + + ++A+ + + ++ +F+KA++ RG +
Sbjct: 119 DYNQAIRIDAKSPDLYNSRGAALVNKGEYDRAIADYDKAIRLNGKFAKAFYNRGQARYLK 178
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLR-------ASCYHAIGEYREAV 639
Q +AI D + + P+ + R A AI +Y A+
Sbjct: 179 NQPDRAIADFDEFIKLSPNEAKGYVQRADARLAKADVLGAIADYDSAI 226
>gi|193215316|ref|YP_001996515.1| tetratricopeptide domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193088793|gb|ACF14068.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
ATCC 35110]
Length = 469
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 130/256 (50%), Gaps = 2/256 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQ 443
L+ G+A N G+ ++SIF++ + P+ E + + + +R +EA + E ++
Sbjct: 110 LNLGLALDNIGRPEESVSIFERAIAISPVDDELFFSKAISLQRLERFVEAEQA-LQECLR 168
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP EAW G + LG+ E++ +K ++ +P S++ + RGIV K K FN +V
Sbjct: 169 INPEHREAWYELGYCKDMLGKLDESLDCYNKHIDLDPYSSNTWYNRGIVLSKLKRFNESV 228
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ V + + SA+ G L++IG ++A +++LK I L+ + + ++ Y++
Sbjct: 229 QSYDMAVAIRENFSSAWYNRGNVLANIGNLQEAIDSYLKTIDLEPDDTDTLFNIATAYEE 288
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L N ++A+ ++ + D ++ A++ + +H A+ + + + P IE L
Sbjct: 289 LGNYKEAITFYEKAVASDADYADAWYALACCYDMINKHDFALYAIEHSVKLIPDCIEYLQ 348
Query: 624 LRASCYHAIGEYREAV 639
+A + + ++ A+
Sbjct: 349 AKADIEYNLADFLAAL 364
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 116/248 (46%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
++ ++ A+ + +++++ P ++ RG A E ++ F +AI NPS E
Sbjct: 49 LDNSEFEDALKVAERLVQIFPYSGDSWFKRGIALNNNGFYEESVLSFEKAIALNPSDTET 108
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
G A +G E++ +A+ P ++ + I + + F A + L C++
Sbjct: 109 LLNLGLALDNIGRPEESVSIFERAIAISPVDDELFFSKAISLQRLERFVEAEQALQECLR 168
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
++ E++ A+ LG +G+ ++ + + K I LD W + L +++
Sbjct: 169 INPEHREAWYELGYCKDMLGKLDESLDCYNKHIDLDPYSSNTWYNRGIVLSKLKRFNESV 228
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+ + I + FS A++ RG +L +G ++AI + ++P + + L+ A+ Y
Sbjct: 229 QSYDMAVAIRENFSSAWYNRGNVLANIGNLQEAIDSYLKTIDLEPDDTDTLFNIATAYEE 288
Query: 632 IGEYREAV 639
+G Y+EA+
Sbjct: 289 LGNYKEAI 296
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 101/245 (41%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK ++ +++ + DP RG + + ++ + A+ + AW
Sbjct: 188 GKLDESLDCYNKHIDLDPYSSNTWYNRGIVLSKLKRFNESVQSYDMAVAIRENFSSAWYN 247
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A +G EAI K ++ EP+ D L + ++ A+ V D
Sbjct: 248 RGNVLANIGNLQEAIDSYLKTIDLEPDDTDTLFNIATAYEELGNYKEAITFYEKAVASDA 307
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+ L I ++ A A +++L + +E +LA+ AL+
Sbjct: 308 DYADAWYALACCYDMINKHDFALYAIEHSVKLIPDCIEYLQAKADIEYNLADFLAALKTY 367
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q++L +D+ + ++ L L + KAI L +DP++ + + A+ Y+ G+
Sbjct: 368 QRILELDELNAMVWYDTASLYLELNKPNKAIPSFQKVLELDPTHADAHFELATAYYLNGQ 427
Query: 635 YREAV 639
+A+
Sbjct: 428 KAQAL 432
>gi|432330743|ref|YP_007248886.1| TPR repeat-containing protein [Methanoregula formicicum SMSP]
gi|432137452|gb|AGB02379.1| TPR repeat-containing protein [Methanoregula formicicum SMSP]
Length = 318
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 1/245 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+A G++ A+ F + L+ DP + A +GRG A Q E I +AI +
Sbjct: 19 SKGLALGRSGQHKEALEAFTRALEADPSFAPAWVGRGFALGKQGRYEEEIECCEKAIALD 78
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG A L E I + L +P +A + +G+ V
Sbjct: 79 PHNVDAWNNRGFACGMLARFEEKIHCCEQTLALDPENATAWNNKGVALGMLGRHEGEVSC 138
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + SA+ G AL + Y++ + +A+++ FL A + + L
Sbjct: 139 CDRALAVRPRYLSAWVNKGFALGKLKRYEEEIACYDRALKIYPFFLSALVNKGVAHIHLK 198
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC-LYL 624
A+E L + L ID +KA + +GL L +G+H +AI L L IDP+ + + L
Sbjct: 199 EYRDAIETLDRALSIDPAHAKALYRKGLTLSLMGRHSEAIPVLEKALEIDPAIADAWVVL 258
Query: 625 RASCY 629
SC+
Sbjct: 259 SNSCF 263
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT A++++PS AW RG A G E I+ KA+ +P++ D + RG
Sbjct: 33 ALEAFTRALEADPSFAPAWVGRGFALGKQGRYEEEIECCEKAIALDPHNVDAWNNRGFAC 92
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F + + LD EN +A+ G+AL +G ++ +A+ + +L A
Sbjct: 93 GMLARFEEKIHCCEQTLALDPENATAWNNKGVALGMLGRHEGEVSCCDRALAVRPRYLSA 152
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
W + L E+ + C + L I F A +G+ L +++ AI+ L L
Sbjct: 153 WVNKGFALGKLKRYEEEIACYDRALKIYPFFLSALVNKGVAHIHLKEYRDAIETLDRALS 212
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
IDP++ + LY + +G + EA+
Sbjct: 213 IDPAHAKALYRKGLTLSLMGRHSEAI 238
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 96/235 (40%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VD +RG A ++ I +Q L DP A +G A E +S
Sbjct: 81 NVDAWNNRGFACGMLARFEEKIHCCEQTLALDPENATAWNNKGVALGMLGRHEGEVSCCD 140
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A+ P AW +G A L E I +AL+ P L +G+ + K++
Sbjct: 141 RALAVRPRYLSAWVNKGFALGKLKRYEEEIACYDRALKIYPFFLSALVNKGVAHIHLKEY 200
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E L + +D + A GL LS +G + +A KA+++D +AW L+
Sbjct: 201 RDAIETLDRALSIDPAHAKALYRKGLTLSLMGRHSEAIPVLEKALEIDPAIADAWVVLSN 260
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
E++ YID + + ++G+ L G+ A+ S LGI
Sbjct: 261 SCFLTGRLEESARAFDMAYYIDVKDVRTGLVKGMSLLKNGKVDDALHAFSEVLGI 315
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%)
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
KE+ Y GLAL G++K+A EA +A++ D +F AW E+ +EC
Sbjct: 11 KEDCRKYYSKGLALGRSGQHKEALEAFTRALEADPSFAPAWVGRGFALGKQGRYEEEIEC 70
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++ + +D A++ RG L + ++ I L +DP N
Sbjct: 71 CEKAIALDPHNVDAWNNRGFACGMLARFEEKIHCCEQTLALDPEN 115
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C R K + +++G+A ++ +Y AI D+ L DP + +AL +G +
Sbjct: 172 CYDRALKIYPFFLSALVNKGVAHIHLKEYRDAIETLDRALSIDPAHAKALYRKGLTLSLM 231
Query: 429 RELEAAISDFTEAIQSNPSAGEAW 452
AI +A++ +P+ +AW
Sbjct: 232 GRHSEAIPVLEKALEIDPAIADAW 255
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 46 LCSLRNWSKAIRILD-SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L L+ + + I D +L + + + N+ + L+ ++ I D+AL +DP +
Sbjct: 160 LGKLKRYEEEIACYDRALKIYPFFLSALVNKGVAHIHLKEYRDAIETLDRALSIDPAHAK 219
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
A KG S +GR EA+ V EK E
Sbjct: 220 ALYRKGLTLSLMGRHSEAIPVLEKALE 246
>gi|443318565|ref|ZP_21047814.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 6406]
gi|442781830|gb|ELR91921.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 6406]
Length = 572
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 40/274 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDP-----------------MYPEALIG------- 420
L++GIAQ + Y A++ FD+ + +P ++ EALI
Sbjct: 230 LNQGIAQFQQANYREAVAAFDRAVDLNPQLALAWTYQGRVLAQGNLHTEALISYTQAVAL 289
Query: 421 -RGTARAF---------QRELEAAISDFTEAIQS------NPSAGEAWKRRGQARAALGE 464
G+ARA R+ E A + +A+Q + EAW + QA A G+
Sbjct: 290 DSGSARALVGQCAALNKTRQYEDAGAACQQALQESDGDWWDLGPAEAWAQYAQALAGQGQ 349
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
EA+ S+A+ P+ A +RG+V + + + A+ ++LD +T LG
Sbjct: 350 YEEALAATSRAVGIRPDYAAAWGDRGVVLWYLRRYGEAIAATQQSIELDDTAARPWTNLG 409
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L S+G++ A A+ A+Q D N W + + L+ E++L + + +D RF
Sbjct: 410 SILRSVGQHTDALAAYENALQRDANNPLIWANRSVVLWHLSRYEESLLSANRAVNLDPRF 469
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++ RG L L ++ +A+ +G+DP+N
Sbjct: 470 ITGWYNRGTALISLQRYDEALNAFVQVIGLDPTN 503
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 83/194 (42%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A +G+Y A++ + + P Y A RG + R AI+ ++I+ + +A
Sbjct: 343 ALAGQGQYEEALAATSRAVGIRPDYAAAWGDRGVVLWYLRRYGEAIAATQQSIELDDTAA 402
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
W G ++G+ +A+ AL+ + N+ I R +V + + ++ +
Sbjct: 403 RPWTNLGSILRSVGQHTDALAAYENALQRDANNPLIWANRSVVLWHLSRYEESLLSANRA 462
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
V LD + + G AL S+ Y +A A ++ I LD +AW L +
Sbjct: 463 VNLDPRFITGWYNRGTALISLQRYDEALNAFVQVIGLDPTNADAWTGAGVALGQLGRGAE 522
Query: 570 ALECLQQVLYIDKR 583
A + L + L ++ +
Sbjct: 523 ARQALAKALELNPQ 536
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 15/240 (6%)
Query: 412 PMYPE-ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
P P A + +G A+ Q A++ F A+ NP AW +G+ A EA+
Sbjct: 222 PTAPALAWLNQGIAQFQQANYREAVAAFDRAVDLNPQLALAWTYQGRVLAQGNLHTEALI 281
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL-SACVKLDKENKSAYTYLGL---- 525
++A+ + SA L + K + + ED +AC + +E+ + LG
Sbjct: 282 SYTQAVALDSGSARALVGQCAALNKTRQY----EDAGAACQQALQESDGDWWDLGPAEAW 337
Query: 526 -----ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
AL+ G+Y++A A +A+ + ++ AWG L +A+ QQ + +
Sbjct: 338 AQYAQALAGQGQYEEALAATSRAVGIRPDYAAAWGDRGVVLWYLRRYGEAIAATQQSIEL 397
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
D ++ + G +L +GQH A+ + L D +N R+ + Y E+++
Sbjct: 398 DDTAARPWTNLGSILRSVGQHTDALAAYENALQRDANNPLIWANRSVVLWHLSRYEESLL 457
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
DP + RGTA + + A++ F + I +P+ +AW G A LG EA Q
Sbjct: 466 DPRFITGWYNRGTALISLQRYDEALNAFVQVIGLDPTNADAWTGAGVALGQLGRGAEARQ 525
Query: 471 DLSKALEFEPNSA 483
L+KALE P A
Sbjct: 526 ALAKALELNPQQA 538
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 29/188 (15%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W+ +AA + EA + A+E EP + + G V + A+ ++
Sbjct: 49 WRNLCDLQAAASQYAEAQKACEAAIELEPRNDGLWARHGGVLLAQDQYPNAIASAMQALR 108
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ +N A+TY+ +A +G + A +A A+++D +WG
Sbjct: 109 FNPQNSLAFTYICMAQYELGNLEPALDACNDALRVD----GSWG---------------- 148
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
++ S A+ RGL+L G A+ + L ++P + L Y A
Sbjct: 149 ---------NQSPSLAWQYRGLILTGQTDPAAALVAYARTLLLEPEDSRTLLHECEAYLA 199
Query: 632 IGEYREAV 639
+ YR A+
Sbjct: 200 LENYRNAI 207
>gi|255528197|ref|ZP_05395020.1| Tetratricopeptide TPR_2 repeat protein [Clostridium carboxidivorans
P7]
gi|296184633|ref|ZP_06853044.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
gi|255508112|gb|EET84529.1| Tetratricopeptide TPR_2 repeat protein [Clostridium carboxidivorans
P7]
gi|296050415|gb|EFG89838.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
Length = 698
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 116/244 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G A+ +++ ++ +P E TA +E AI ++ ++I+ NP EA+
Sbjct: 434 GLLGEAMQVYETAIRFNPNNSELYCNLATALQKSNNIEDAIKNYEKSIELNPKLAEAYNN 493
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G L + +A + KA++ + N A G V F ++ +V+ +KLD
Sbjct: 494 LGSIYIELEDYKKATNYIKKAIKIDKNLAQAFFNLGNVLFSLGRYSESVQAYKKYIKLDN 553
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N Y LG AL + E+KKA + +LK+I+++ N+ + +L + N +A++
Sbjct: 554 SNFEVYFKLGNALYELKEFKKAIDMYLKSIEINSNYTHSNFNLANTFYTTNNINEAIKYY 613
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++V+ ID + +AY+ G + L +KKA + +P+ Y A+ + +GE
Sbjct: 614 EKVISIDPLYIEAYNNLGTMFCALKDYKKAKGCYQIAIKNNPNFALGYYSLATTQYMLGE 673
Query: 635 YREA 638
EA
Sbjct: 674 KEEA 677
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 110/268 (41%), Gaps = 37/268 (13%)
Query: 409 KEDPMYPE---ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
KE +YPE A G E + A+ + I +P+ A+K + +
Sbjct: 309 KEIELYPESVNAYYGLALLYEELEEFKEALDIIEKIIVIDPNDYNAYKMIANIQVNMRNY 368
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFK-------------DFNA----------- 501
A + A+ PN D ++ G++ +K K D N
Sbjct: 369 DIAEKQYKNAININPNYGDAYNDYGVLLYKLKRYEESKELCKKAIDLNPYECIYYNNLAN 428
Query: 502 ----------AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
A++ ++ + N Y L AL + A + + K+I+L+
Sbjct: 429 SLNELGLLGEAMQVYETAIRFNPNNSELYCNLATALQKSNNIEDAIKNYEKSIELNPKLA 488
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ +L Y +L + +KA +++ + IDK ++A+ G +L LG++ ++++
Sbjct: 489 EAYNNLGSIYIELEDYKKATNYIKKAIKIDKNLAQAFFNLGNVLFSLGRYSESVQAYKKY 548
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +D SN E + + + + E+++A+
Sbjct: 549 IKLDNSNFEVYFKLGNALYELKEFKKAI 576
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 2/260 (0%)
Query: 382 DFRLSRGIA--QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
D+ + IA QVN Y A + + +P Y +A G + E +
Sbjct: 351 DYNAYKMIANIQVNMRNYDIAEKQYKNAININPNYGDAYNDYGVLLYKLKRYEESKELCK 410
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI NP + + LG EA+Q A+ F PN++++ K +
Sbjct: 411 KAIDLNPYECIYYNNLANSLNELGLLGEAMQVYETAIRFNPNNSELYCNLATALQKSNNI 470
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+++ ++L+ + AY LG + +YKKA KAI++D+N +A+ +L
Sbjct: 471 EDAIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKKATNYIKKAIKIDKNLAQAFFNLGN 530
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
L ++++ ++ + +D + Y G L+ L + KKAI + I+ +
Sbjct: 531 VLFSLGRYSESVQAYKKYIKLDNSNFEVYFKLGNALYELKEFKKAIDMYLKSIEINSNYT 590
Query: 620 ECLYLRASCYHAIGEYREAV 639
+ A+ ++ EA+
Sbjct: 591 HSNFNLANTFYTTNNINEAI 610
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 105/222 (47%), Gaps = 8/222 (3%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI +++ ++ +P EA G+ + + A + +AI+ + + +A+ G
Sbjct: 473 AIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKKATNYIKKAIKIDKNLAQAFFNLGNVL 532
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+LG E++Q K ++ + ++ ++ + G ++ K+F A++ ++++ S
Sbjct: 533 FSLGRYSESVQAYKKYIKLDNSNFEVYFKLGNALYELKEFKKAIDMYLKSIEIN----SN 588
Query: 520 YTYLGLALS----SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
YT+ L+ + +A + + K I +D ++EA+ +L + L + +KA C Q
Sbjct: 589 YTHSNFNLANTFYTTNNINEAIKYYEKVISIDPLYIEAYNNLGTMFCALKDYKKAKGCYQ 648
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ + F+ Y+ + LG+ ++A K+ + +D S
Sbjct: 649 IAIKNNPNFALGYYSLATTQYMLGEKEEADKNNEIAISLDKS 690
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 107/221 (48%), Gaps = 2/221 (0%)
Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
+ D +++ Y E + +G +++ ++A ++ +AI+ + + A+ G + L
Sbjct: 204 LLDLFIEKYNTYSEGYLYKGIFLYEEKKFKSAKINYLKAIELDSNNILAYYNLGNTQVIL 263
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
E +A + K L+ + + D+ G + K ++ A + + ++L E+ +AY
Sbjct: 264 NEYEDAKKSYEKVLKLDSDHKDVHSNLGNIYSDLKLYDDAKKMYNKEIELYPESVNAYYG 323
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
L L + E+K+A + K I +D N A+ + ++ N + A + + + I+
Sbjct: 324 LALLYEELEEFKEALDIIEKIIVIDPNDYNAYKMIANIQVNMRNYDIAEKQYKNAININP 383
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ AY+ G+LL+ L +++++ + + ++P EC+Y
Sbjct: 384 NYGDAYNDYGVLLYKLKRYEESKELCKKAIDLNPY--ECIY 422
>gi|307150150|ref|YP_003885534.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 7822]
gi|306980378|gb|ADN12259.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 7822]
Length = 912
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 147/335 (43%), Gaps = 70/335 (20%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF-QRELE 432
+K+ S+D+ L G+ + K A+ D+ + P + A +G A AF +++ E
Sbjct: 512 PPAKANSLDW-LIYGLEVLRLNKPQEALKAIDKAISLKPDFDLAYYAKGLALAFTEQKFE 570
Query: 433 AAISDFTEAIQSNPSAGEAWK----------RRGQARAALGESV---------------- 466
A+ F +A Q NP +AW+ R ++ AA+ +S+
Sbjct: 571 QALVQFDKATQLNPQLEQAWRWKSISLANLDRHSESLAAIDQSIKLRPKDILLYQFRLFV 630
Query: 467 --------EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
EA++ +++ L + N+ + RG++ F+ KD+ +++DLS ++++
Sbjct: 631 LFNLENYSEALKTVTQMLALKENNPNGYFWRGLIYFQQKDYQNSLKDLSKAIEINPNYAE 690
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG----------------------- 555
AY G + +Y+KA + KAI++ +++EA+
Sbjct: 691 AYGIRGGVYRELQDYQKAITDYNKAIEIQPDWVEAYNGRGSAYIVLQEPQKAFTDFSKSL 750
Query: 556 -----------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
L FY N EK ++ L + L + +++AY +RG + GL Q++KA
Sbjct: 751 EIKQNNPDAYLGLGIFYIAQKNYEKGMDYLSKTLELKPDYAEAYVIRGKIYVGLEQYQKA 810
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I D S L I +N E R + Y + +Y +A+
Sbjct: 811 ITDYSKALEIQQNNAEAYAERGAAYIYLKDYPKAI 845
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 116/240 (48%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
VT++ K + + RG+ + Y +++ + ++ +P Y EA RG
Sbjct: 643 TVTQMLALKENNPNGYFWRGLIYFQQKDYQNSLKDLSKAIEINPNYAEAYGIRGGVYREL 702
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + AI+D+ +AI+ P EA+ RG A L E +A D SK+LE + N+ D
Sbjct: 703 QDYQKAITDYNKAIEIQPDWVEAYNGRGSAYIVLQEPQKAFTDFSKSLEIKQNNPDAYLG 762
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
GI K++ ++ LS ++L + AY G + +Y+KA + KA+++ +
Sbjct: 763 LGIFYIAQKNYEKGMDYLSKTLELKPDYAEAYVIRGKIYVGLEQYQKAITDYSKALEIQQ 822
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N EA+ Y L + KA+ L + + ++ ++ AY RG + L + +KA DL
Sbjct: 823 NNAEAYAERGAAYIYLKDYPKAITDLSKAVELNSNYADAYMARGAVYLVLQEAQKAQGDL 882
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P+A +G G Q+ E + ++ ++ P EA+ RG+ L + +AI D SK
Sbjct: 757 PDAYLGLGIFYIAQKNYEKGMDYLSKTLELKPDYAEAYVIRGKIYVGLEQYQKAITDYSK 816
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
ALE + N+A+ ERG KD+ A+ DLS V+L+ AY G + E +
Sbjct: 817 ALEIQQNNAEAYAERGAAYIYLKDYPKAITDLSKAVELNSNYADAYMARGAVYLVLQEAQ 876
Query: 535 KAEEAHLKAIQL 546
KA+ KA QL
Sbjct: 877 KAQGDLQKAAQL 888
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 6/183 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI---QSNPSAGEAWK 453
Y AI+ +++ ++ P + EA GRG+A +E + A +DF++++ Q+NP +A+
Sbjct: 705 YQKAITDYNKAIEIQPDWVEAYNGRGSAYIVLQEPQKAFTDFSKSLEIKQNNP---DAYL 761
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
G A + + LSK LE +P+ A+ RG + + + A+ D S +++
Sbjct: 762 GLGIFYIAQKNYEKGMDYLSKTLELKPDYAEAYVIRGKIYVGLEQYQKAITDYSKALEIQ 821
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ N AY G A + +Y KA KA++L+ N+ +A+ Y L ++KA
Sbjct: 822 QNNAEAYAERGAAYIYLKDYPKAITDLSKAVELNSNYADAYMARGAVYLVLQEAQKAQGD 881
Query: 574 LQQ 576
LQ+
Sbjct: 882 LQK 884
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 369 CVTRISKSKSI---SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
T SKS I + D L GI + + Y + + L+ P Y EA + RG
Sbjct: 742 AFTDFSKSLEIKQNNPDAYLGLGIFYIAQKNYEKGMDYLSKTLELKPDYAEAYVIRGKIY 801
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AI+D+++A++ + EA+ RG A L + +AI DLSKA+E N AD
Sbjct: 802 VGLEQYQKAITDYSKALEIQQNNAEAYAERGAAYIYLKDYPKAITDLSKAVELNSNYADA 861
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
RG V ++ A DL +L +E + Y
Sbjct: 862 YMARGAVYLVLQEAQKAQGDLQKAAQLYQEQGNTQMY 898
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
SL++ SKAI I + A++Y I R Y +L+ ++ I D +KA+++ P ++AY
Sbjct: 674 SLKDLSKAIEI-NPNYAEAYGI-----RGGVYRELQDYQKAITDYNKAIEIQPDWVEAYN 727
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
+G A+ L ++A + + K E
Sbjct: 728 GRGSAYIVLQEPQKAFTDFSKSLE 751
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QSYEIQD 71
L++ +++ ID+ +++ + + L L +L N+S+A++ + +LA +
Sbjct: 600 LDRHSESLAAIDQSIKLRP--KDILLYQFRLFVLFNLENYSEALKTVTQMLALKENNPNG 657
Query: 72 ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
R Y Q + +++ ++D KA++++P +AY ++G + L ++A++ + K E
Sbjct: 658 YFWRGLIYFQQKDYQNSLKDLSKAIEINPNYAEAYGIRGGVYRELQDYQKAITDYNKAIE 717
>gi|398338140|ref|ZP_10522845.1| hypothetical protein LkmesMB_22907 [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 255
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TR+++ + ++DFR G +VN KYA AI F++ ++ + +A+ RG + E
Sbjct: 59 TRLTEDDN-AIDFR---GWIKVNLYKYADAIVDFNEAIRLNANNSQAIFHRGYTYYYMGE 114
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A++D E+I+ NP ++ RG+ L EAI+DL++ +E +PN + L ERG
Sbjct: 115 YKKALTDINESIRLNPEFNRSYLMRGKIGNELQAYSEAIEDLNRCIEVDPNWVEALVERG 174
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
V+ + A +D ++LD +N AY G+ L S+
Sbjct: 175 AVSIRMSKLGDAYQDFDKVIQLDPKNPRAYYNRGIILVSV 214
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 70/141 (49%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + L + +AI D ++A+ N++ + RG + ++ A+ D++ ++L+
Sbjct: 71 RGWIKVNLYKYADAIVDFNEAIRLNANNSQAIFHRGYTYYYMGEYKKALTDINESIRLNP 130
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E +Y G + + Y +A E + I++D N++EA ++ A +
Sbjct: 131 EFNRSYLMRGKIGNELQAYSEAIEDLNRCIEVDPNWVEALVERGAVSIRMSKLGDAYQDF 190
Query: 575 QQVLYIDKRFSKAYHLRGLLL 595
+V+ +D + +AY+ RG++L
Sbjct: 191 DKVIQLDPKNPRAYYNRGIIL 211
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A+ RG + + AI DF EAI+ N + +A RG +GE +A+ D+++++
Sbjct: 67 AIDFRGWIKVNLYKYADAIVDFNEAIRLNANNSQAIFHRGYTYYYMGEYKKALTDINESI 126
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
P RG + + + ++ A+EDL+ C+++D A G + + A
Sbjct: 127 RLNPEFNRSYLMRGKIGNELQAYSEAIEDLNRCIEVDPNWVEALVERGAVSIRMSKLGDA 186
Query: 537 EEAHLKAIQLD 547
+ K IQLD
Sbjct: 187 YQDFDKVIQLD 197
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%)
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + + A+ D + ++L+ N A + G +GEYKKA ++I+L+
Sbjct: 71 RGWIKVNLYKYADAIVDFNEAIRLNANNSQAIFHRGYTYYYMGEYKKALTDINESIRLNP 130
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
F ++ + +L +A+E L + + +D + +A RG + + + A +D
Sbjct: 131 EFNRSYLMRGKIGNELQAYSEAIEDLNRCIEVDPNWVEALVERGAVSIRMSKLGDAYQDF 190
Query: 609 SSGLGIDPSNIECLYLRA 626
+ +DP N Y R
Sbjct: 191 DKVIQLDPKNPRAYYNRG 208
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 61/113 (53%)
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E+ +A + G ++ +Y A +AI+L+ N +A H Y + +KAL +
Sbjct: 63 EDDNAIDFRGWIKVNLYKYADAIVDFNEAIRLNANNSQAIFHRGYTYYYMGEYKKALTDI 122
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+ + ++ F+++Y +RG + + L + +AI+DL+ + +DP+ +E L R +
Sbjct: 123 NESIRLNPEFNRSYLMRGKIGNELQAYSEAIEDLNRCIEVDPNWVEALVERGA 175
>gi|359462560|ref|ZP_09251123.1| hypothetical protein ACCM5_27771 [Acaryochloris sp. CCMEE 5410]
Length = 265
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 1/194 (0%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+ L+ G +A + + AIS + +AIQ NP A+ RG A LG+ AI D ++A
Sbjct: 43 QTLLQSGREKAKRGNYQEAISIYNQAIQLNPRNTSAYIDRGLAYHDLGDYQGAIADFNRA 102
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI-GEYK 534
LE EP+ A L+ RG DF+ A+ DL+ ++L AY + L ++ G+++
Sbjct: 103 LEIEPDHAIALYNRGEARSDIGDFDGAIVDLTQAIRLKPNYAEAYNIRAIILGAVQGQWQ 162
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
KA + +AI +F +A+ + + Y + ++ A+ + + ++ + ++AY RGLL
Sbjct: 163 KALKDLNQAILFRPDFADAYYNRGRTYAAMRDNTNAIANYTKAIELNAKLAEAYGNRGLL 222
Query: 595 LHGLGQHKKAIKDL 608
G + AI DL
Sbjct: 223 KAQTGDKQGAIVDL 236
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L G + G Y AISI++Q ++ +P A I RG A + + AI+DF A++
Sbjct: 46 LQSGREKAKRGNYQEAISIYNQAIQLNPRNTSAYIDRGLAYHDLGDYQGAIADFNRALEI 105
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAV 503
P A RG+AR+ +G+ AI DL++A+ +PN A+ + R I+ + + A+
Sbjct: 106 EPDHAIALYNRGEARSDIGDFDGAIVDLTQAIRLKPNYAEAYNIRAIILGAVQGQWQKAL 165
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+DL+ + + AY G +++ + A + KAI+L+ EA+G+
Sbjct: 166 KDLNQAILFRPDFADAYYNRGRTYAAMRDNTNAIANYTKAIELNAKLAEAYGN 218
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 35/166 (21%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG+A + G Y AI+ F++ L+ +P + AL RG AR+ + + AI D T+AI+
Sbjct: 80 IDRGLAYHDLGDYQGAIADFNRALEIEPDHAIALYNRGEARSDIGDFDGAIVDLTQAIRL 139
Query: 445 NPSAGEA--------------WKR---------------------RGQARAALGESVEAI 469
P+ EA W++ RG+ AA+ ++ AI
Sbjct: 140 KPNYAEAYNIRAIILGAVQGQWQKALKDLNQAILFRPDFADAYYNRGRTYAAMRDNTNAI 199
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
+ +KA+E A+ RG++ + D A+ DL L KE
Sbjct: 200 ANYTKAIELNAKLAEAYGNRGLLKAQTGDKQGAIVDLRYAANLFKE 245
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K ++ A+ + ++L+ N SAY GLA +G+Y+ A +A++++ + A
Sbjct: 54 KRGNYQEAISIYNQAIQLNPRNTSAYIDRGLAYHDLGDYQGAIADFNRALEIEPDHAIAL 113
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL-GQHKKAIKDLSSGLG 613
+ + D+ + + A+ L Q + + +++AY++R ++L + GQ +KA+KDL+ +
Sbjct: 114 YNRGEARSDIGDFDGAIVDLTQAIRLKPNYAEAYNIRAIILGAVQGQWQKALKDLNQAIL 173
Query: 614 IDPSNIECLYLRASCY-------HAIGEYREAV 639
P + Y R Y +AI Y +A+
Sbjct: 174 FRPDFADAYYNRGRTYAAMRDNTNAIANYTKAI 206
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
N ++A+ Q + ++ R + AY RGL H LG ++ AI D + L I+P + LY
Sbjct: 56 GNYQEAISIYNQAIQLNPRNTSAYIDRGLAYHDLGDYQGAIADFNRALEIEPDHAIALYN 115
Query: 625 RASCYHAIGEYREAVI 640
R IG++ A++
Sbjct: 116 RGEARSDIGDFDGAIV 131
>gi|296126399|ref|YP_003633651.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296018215|gb|ADG71452.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 376
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 4/161 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG++Q+ G+ AI FD+ ++ DP YP+ + RG ++ ++ E A+ DF +AI+
Sbjct: 208 LYRGVSQLVMGRNEEAIKDFDKAIELDPNYPKFYLYRGHSKNLLKKYEEAVKDFDKAIEL 267
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + +A+ RG ++ L + EAI+D K +E PN D + RG+ + +E
Sbjct: 268 DSNYAKAYMYRGVSKLGLNKYEEAIKDFDKTIELNPNYIDAYYHRGLSKLGLNQNDEGIE 327
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
D +L+ +N Y G S+ K EEA LK Q
Sbjct: 328 DFDKIAELNPDNSFVYFVRGNIKKSLN---KDEEA-LKDFQ 364
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 116/244 (47%), Gaps = 22/244 (9%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEA----------LIGRGTARAF--------- 427
RG + + Y AI + + L+ +P Y EA L ++F
Sbjct: 120 RGDVETDLNLYDEAIEDYKKALELNPNYIEAKKALEEADRKLKEYNLNKSFDNYYIEGVN 179
Query: 428 ---QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+++ E A+ +AI+ +P+ +A+ RG ++ +G + EAI+D KA+E +PN
Sbjct: 180 YYNKKQFEDALKTLNKAIELDPNKAKAYLYRGVSQLVMGRNEEAIKDFDKAIELDPNYPK 239
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG K + AV+D ++LD AY Y G++ + +Y++A + K I
Sbjct: 240 FYLYRGHSKNLLKKYEEAVKDFDKAIELDSNYAKAYMYRGVSKLGLNKYEEAIKDFDKTI 299
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L+ N+++A+ H L +++ +E ++ ++ S Y +RG + L + ++A
Sbjct: 300 ELNPNYIDAYYHRGLSKLGLNQNDEGIEDFDKIAELNPDNSFVYFVRGNIKKSLNKDEEA 359
Query: 605 IKDL 608
+KD
Sbjct: 360 LKDF 363
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 22/241 (9%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES--------------- 465
RG + AI D+ +A++ NP+ EA K +A L E
Sbjct: 120 RGDVETDLNLYDEAIEDYKKALELNPNYIEAKKALEEADRKLKEYNLNKSFDNYYIEGVN 179
Query: 466 -------VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+A++ L+KA+E +PN A RG+ A++D ++LD
Sbjct: 180 YYNKKQFEDALKTLNKAIELDPNKAKAYLYRGVSQLVMGRNEEAIKDFDKAIELDPNYPK 239
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
Y Y G + + + +Y++A + KAI+LD N+ +A+ + L E+A++ + +
Sbjct: 240 FYLYRGHSKNLLKKYEEAVKDFDKAIELDSNYAKAYMYRGVSKLGLNKYEEAIKDFDKTI 299
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
++ + AY+ RGL GL Q+ + I+D ++P N ++R + ++ + EA
Sbjct: 300 ELNPNYIDAYYHRGLSKLGLNQNDEGIEDFDKIAELNPDNSFVYFVRGNIKKSLNKDEEA 359
Query: 639 V 639
+
Sbjct: 360 L 360
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 5/145 (3%)
Query: 377 KSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
K+I +D F L RG ++ KY A+ FD+ ++ D Y +A + RG ++ +
Sbjct: 229 KAIELDPNYPKFYLYRGHSKNLLKKYEEAVKDFDKAIELDSNYAKAYMYRGVSKLGLNKY 288
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI DF + I+ NP+ +A+ RG ++ L ++ E I+D K E P+++ + RG
Sbjct: 289 EEAIKDFDKTIELNPNYIDAYYHRGLSKLGLNQNDEGIEDFDKIAELNPDNSFVYFVRGN 348
Query: 492 VNFKFKDFNAAVEDLSACVKLDKEN 516
+ A++D +L+K+N
Sbjct: 349 IKKSLNKDEEALKDFQKYEELEKQN 373
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG++++ KY AI FD+ ++ +P Y +A RG ++ + + I DF + +
Sbjct: 276 MYRGVSKLGLNKYEEAIKDFDKTIELNPNYIDAYYHRGLSKLGLNQNDEGIEDFDKIAEL 335
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
NP + RG + +L + EA++D K E E ++ I
Sbjct: 336 NPDNSFVYFVRGNIKKSLNKDEEALKDFQKYEELEKQNSQI 376
>gi|403376993|gb|EJY88489.1| TPR repeat-containing protein [Oxytricha trifallax]
Length = 715
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 143/307 (46%), Gaps = 30/307 (9%)
Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
F ++ +N+ ++ K C + + + ++RG+ + G + A++ F+Q +K
Sbjct: 381 FHLGLMYHRTNQFHKSLK-CFSNVLQKLPEDKTVFIARGLVYQDMGNHQFAVNDFNQAIK 439
Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAI-----QSNPSAGEAWKRRGQARAALGE 464
DP + EA RG ++ R AI DF ++ Q NP + +G AL +
Sbjct: 440 LDPNFSEAFYRRGVSKLKSRRYHEAIEDFKMSLDLDTNQENPGV---YDGQGCCYHALRD 496
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
+AI + A+E +P++ L R + + F +++DL + +K+++ + LG
Sbjct: 497 YDQAISFFNTAIEKDPHNISFLMNRAQCYYDLQMFTQSIDDLESALKVNENDPQVLYKLG 556
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLE-----------AWGHLTQFYQDLANSEKALEC 573
L+ + +YKK + KA+ +++ FL A+ HL +F + + + +E
Sbjct: 557 LSFYAFNKYKKCIKTLKKAL-INKPFLTYEADIYYHIGLAYCHLEKFEKSIYPYSRCIEM 615
Query: 574 LQ-QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+ + YI +R +KAY + + H+KA++D S + +P N + RA ++
Sbjct: 616 IPSDIRYIHER-AKAYQM-------IEDHEKAVEDFSLVIKKNPKNAHAHFRRAFSLKSL 667
Query: 633 GEYREAV 639
Y EA
Sbjct: 668 KRYPEAA 674
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 119/291 (40%), Gaps = 31/291 (10%)
Query: 361 EAKRNKKFCVTRISK-SKSI-----SVDFRLSRGIAQVNEGKYASAISIFDQILKEDP-- 412
+A+ NK C+ R+ + +SI +V+ R + A N G FD+ L E
Sbjct: 194 QARFNKGICLRRLGRLEQSIDDLKKAVEMRADKASAHNNLGLSYFEKEDFDEALNEFSKA 253
Query: 413 --MYPEALI--GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ P + RG A +LE A D+ EAI NP + RG G+ A
Sbjct: 254 ISIEPHSFHYNNRGLAHYHIGKLEDAKKDYDEAIARNPEDPFFYFNRGNVFLNQGDYDNA 313
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
QD +A++ PN+ H +G+ + + ED K S YT L L
Sbjct: 314 HQDYDRAIQIAPNNPKFWHSKGLAHE-----GKSQEDSK------KGASSDYT-LSLQEK 361
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
SI YK+A + L NF+ + HL Y K+L+C VL +
Sbjct: 362 SIEMYKQA-------LALSENFISSRFHLGLMYHRTNQFHKSLKCFSNVLQKLPEDKTVF 414
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RGL+ +G H+ A+ D + + +DP+ E Y R Y EA+
Sbjct: 415 IARGLVYQDMGNHQFAVNDFNQAIKLDPNFSEAFYRRGVSKLKSRRYHEAI 465
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 22/270 (8%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ + +G Q N +A F + +DP A RG + + A+ DFT AI
Sbjct: 52 YFMGKGNVQQN---LETAFQYFSEACNKDPNMAAAYHWRGRCYQGMGDFQRALYDFTLAI 108
Query: 443 ------QSNPS-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
Q+ P E + GQ LG+ EA++ A++ +P + + + R +V K
Sbjct: 109 KLDNQQQAKPQDQAEHYNFAGQCHQELGQLDEALKHYEIAVKRDPLNGNYYYNRALVKAK 168
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYL-------GLALSSIGEYKKAEEAHLKAIQLDR 548
+ A+ED + + EN S Y+ G+ L +G +++ + KA+++
Sbjct: 169 LEKLEEAIEDYNKAI----ENLSDQNYIYQARFNKGICLRRLGRLEQSIDDLKKAVEMRA 224
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A +L Y + + ++AL + + I+ S Y+ RGL + +G+ + A KD
Sbjct: 225 DKASAHNNLGLSYFEKEDFDEALNEFSKAISIEPH-SFHYNNRGLAHYHIGKLEDAKKDY 283
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ +P + + R + + G+Y A
Sbjct: 284 DEAIARNPEDPFFYFNRGNVFLNQGDYDNA 313
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 4/183 (2%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F T I K ++ F ++R + + +I + LK + P+ L G +
Sbjct: 503 FFNTAIEKDPH-NISFLMNRAQCYYDLQMFTQSIDDLESALKVNENDPQVLYKLGLSFYA 561
Query: 428 QRELEAAISDFTEAIQSNP---SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ + I +A+ + P + + G A L + ++I S+ +E P+
Sbjct: 562 FNKYKKCIKTLKKALINKPFLTYEADIYYHIGLAYCHLEKFEKSIYPYSRCIEMIPSDIR 621
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+HER +D AVED S +K + +N A+ +L S+ Y +A + KA
Sbjct: 622 YIHERAKAYQMIEDHEKAVEDFSLVIKKNPKNAHAHFRRAFSLKSLKRYPEAADDFEKAK 681
Query: 545 QLD 547
+LD
Sbjct: 682 ELD 684
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
+ D G+A + K+ +I + + ++ P + R A + E A+ D
Sbjct: 583 TYEADIYYHIGLAYCHLEKFEKSIYPYSRCIEMIPSDIRYIHERAKAYQMIEDHEKAVED 642
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
F+ I+ NP A RR + +L EA D KA E +P L+ + +VN+K
Sbjct: 643 FSLVIKKNPKNAHAHFRRAFSLKSLKRYPEAADDFEKAKELDP-----LNPKMVVNYK 695
>gi|153939961|ref|YP_001391307.1| hypothetical protein CLI_2049 [Clostridium botulinum F str.
Langeland]
gi|384462321|ref|YP_005674916.1| hypothetical protein CBF_2034 [Clostridium botulinum F str. 230613]
gi|152935857|gb|ABS41355.1| tetratricopeptide repeat family protein [Clostridium botulinum F
str. Langeland]
gi|295319338|gb|ADF99715.1| tetratricopeptide repeat family protein [Clostridium botulinum F
str. 230613]
Length = 251
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ +++ I +T +I+ PS +A+ R + LGE ++I+D +K LE P D
Sbjct: 34 YSSDIKDKIKFYTISIKLKPSFIDAYFNRAELYKELGEYNKSIEDYNKILELNPKDKDCY 93
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ R IV + K+++ +++DL V +DK K+ Y G+ I +YK+A KAI
Sbjct: 94 NNRAIVYYLIKNYDKSLQDLDVLVSIDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIH- 152
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+DLA+SE AY R + L ++ +IK
Sbjct: 153 ---------------EDLADSE------------------AYENRAFAYYNLKKYSSSIK 179
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D ++ L + P N R + Y+ I Y +A+
Sbjct: 180 DYTNALKLTPENKNIYLNRGTIYYKIKNYEDAI 212
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I Y ++ D ++ D Y RG + + A +FT+AI +
Sbjct: 95 NRAIVYYLIKNYDKSLQDLDVLVSIDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHED 154
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ EA++ R A L + +I+D + AL+ P + +I RG + +K K++ A+ D
Sbjct: 155 LADSEAYENRAFAYYNLKKYSSSIKDYTNALKLTPENKNIYLNRGTIYYKIKNYEDAISD 214
Query: 506 LSACVKLDKENKSAY 520
+ +++ S Y
Sbjct: 215 YMKALNCKEKDPSFY 229
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 92/225 (40%), Gaps = 8/225 (3%)
Query: 321 SNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSIS 380
+N N +K S+ NK + E+ ++ S++ K KF I K K
Sbjct: 4 TNFNEFKLAKKSVKKNKYESNAENFFSNAY-------YSSDIKDKIKFYTISI-KLKPSF 55
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +R G+Y +I +++IL+ +P + R + + ++ D
Sbjct: 56 IDAYFNRAELYKELGEYNKSIEDYNKILELNPKDKDCYNNRAIVYYLIKNYDKSLQDLDV 115
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
+ + + RG + + A + +KA+ + ++ R + K ++
Sbjct: 116 LVSIDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHEDLADSEAYENRAFAYYNLKKYS 175
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
++++D + +KL ENK+ Y G I Y+ A ++KA+
Sbjct: 176 SSIKDYTNALKLTPENKNIYLNRGTIYYKIKNYEDAISDYMKALN 220
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 52/98 (53%)
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
+I+L +F++A+ + + Y++L K++E ++L ++ + Y+ R ++ + + +
Sbjct: 48 SIKLKPSFIDAYFNRAELYKELGEYNKSIEDYNKILELNPKDKDCYNNRAIVYYLIKNYD 107
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
K+++DL + ID + R + I +Y+ A I
Sbjct: 108 KSLQDLDVLVSIDKHYKNIYFNRGMVFLGIEDYKRAAI 145
>gi|365890554|ref|ZP_09429068.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3809]
gi|365333560|emb|CCE01599.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3809]
Length = 453
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 5/238 (2%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+RL + + G A + + DP EA RG Q L+ A++D+ +AI
Sbjct: 100 YRLRGDLMREAGGDAGKATADLSMAITLDPNDAEAYELRGVVYTEQHRLDRALADYDQAI 159
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P +A+ RG A G++ +A+QD +A+ +P+ R K + A
Sbjct: 160 RLKPDYAQAYADRGVAFYLRGDNEKAVQDYDEAIRLDPDRPRTFTNRAAAYKKLGQIDKA 219
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQF 560
+ D ++ D + + GL +++ EY KA + +AI+L NFL G QF
Sbjct: 220 LADDHEAIRRDPKVPEYFDNRGLTYAAMKEYDKAIADYDQAIKLQPKPNFLTNRGDSYQF 279
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+L + AL L +D F+ AY+ R +L +G+ KA+ D + L +DP N
Sbjct: 280 KGELGS---ALSDYDAALRLDPDFALAYNNRAVLFRKMGERAKALADYEAALRLDPGN 334
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQ-ARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A+ D AI + A++ RG R A G++ +A DLS A+ +PN A+ RG+V
Sbjct: 82 ALKDVDRAIALDGKNARAYRLRGDLMREAGGDAGKATADLSMAITLDPNDAEAYELRGVV 141
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ + A+ D ++L + AY G+A G+ +KA + + +AI+LD +
Sbjct: 142 YTEQHRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQDYDEAIRLDPDRPR 201
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ + Y+ L +KAL + + D + + + RGL + ++ KAI D +
Sbjct: 202 TFTNRAAAYKKLGQIDKALADDHEAIRRDPKVPEYFDNRGLTYAAMKEYDKAIADYDQAI 261
Query: 613 GIDPSNIECLYLRASCYHAIGE 634
+ P L R Y GE
Sbjct: 262 KLQPKP-NFLTNRGDSYQFKGE 282
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ +Y AI+ +DQ +K P P L RG + F+ EL +A+SD+ A++ +
Sbjct: 239 NRGLTYAAMKEYDKAIADYDQAIKLQPK-PNFLTNRGDSYQFKGELGSALSDYDAALRLD 297
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
P A+ R +GE +A+ D AL +P + + R + + K F A
Sbjct: 298 PDFALAYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAAAGRRAMLAEIKKFGA 353
>gi|239832614|ref|ZP_04680943.1| TPR domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|444309662|ref|ZP_21145294.1| hypothetical protein D584_07693 [Ochrobactrum intermedium M86]
gi|239824881|gb|EEQ96449.1| TPR domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|443486929|gb|ELT49699.1| hypothetical protein D584_07693 [Ochrobactrum intermedium M86]
Length = 295
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A D+++AIQ NP
Sbjct: 86 RGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYRYMGDSTRAAQDYSKAIQLNP 145
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG G +A+ D ++A+ + H RG++ A+ED
Sbjct: 146 QYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDF 205
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S V L+ Y G++ ++G+Y A + AI LD+N E+W + Y+ +
Sbjct: 206 SKAVSLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 265
Query: 567 SEKALECLQQVLYIDKRFSKA 587
KA + + +D ++ A
Sbjct: 266 KAKAANSYSRAVQLDPKYQPA 286
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALV-- 123
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
Y Y+G + +A + + KAIQL+ + A+
Sbjct: 124 -------------------------YRYMG-------DSTRAAQDYSKAIQLNPQYDAAY 151
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
Y+ ++AL Q + + +AYH RGL+ GQHK+AI+D S + +
Sbjct: 152 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAVSL 211
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
+ + E R Y A+G+Y A
Sbjct: 212 NSTAPEPYNGRGISYVALGDYDNAF 236
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
IS +++ +P PE RG+A + A+ DF +AI NP+ +A+ R
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYR 125
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+G+S A QD SKA++ P RG V + + A+ D + + L + AY
Sbjct: 126 YMGDSTRAAQDYSKAIQLNPQYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAY 185
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL + G++K+A E KA+ L+ E + Y L + + A + + +
Sbjct: 186 HNRGLIYQAKGQHKQAIEDFSKAVSLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 245
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
D+ ++++ + L+ G KA S + +DP
Sbjct: 246 DQNVAESWANQALVYEHNGDKAKAANSYSRAVQLDP 281
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG G+ A+S F+Q + A RG + + + AI DF++A+
Sbjct: 152 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAVSL 211
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N +A E + RG + ALG+ A D + A+ + N A+ + +V D A
Sbjct: 212 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGDKAKAAN 271
Query: 505 DLSACVKLDKENKSA 519
S V+LD + + A
Sbjct: 272 SYSRAVQLDPKYQPA 286
>gi|428311655|ref|YP_007122632.1| hypothetical protein Mic7113_3500 [Microcoleus sp. PCC 7113]
gi|428253267|gb|AFZ19226.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 847
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ A++ F + +K DP P A RG A E A++ F + ++ NP+ W+
Sbjct: 464 GRIEEALASFSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKGLELNPNESITWRN 523
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG LG +A+ KA+E EP +A+ L RG + A+ ++LD
Sbjct: 524 RGATLGNLGRHEDALISYDKAIELEPANANALINRGAALGNLGRYEEALVSYDKAIELDP 583
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N +A G+ S + Y +A KAI+LD N+ W + L ++AL
Sbjct: 584 TNANALINQGVVFSKLRRYNEALVCADKAIELDPNYGLVWNYQGWVLGQLERYDEALTSY 643
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + +D + + RG LL LG + + ++
Sbjct: 644 DKAIELDPTDADGWFNRGWLLGELGSYDEGLE 675
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 5/244 (2%)
Query: 374 SKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
S SK+I +D +RGIA +Y A++ F++ L+ +P RG
Sbjct: 472 SFSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKGLELNPNESITWRNRGATLGNL 531
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E A+ + +AI+ P+ A RG A LG EA+ KA+E +P +A+ L
Sbjct: 532 GRHEDALISYDKAIELEPANANALINRGAALGNLGRYEEALVSYDKAIELDPTNANALIN 591
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G+V K + +N A+ ++LD + Y G L + Y +A ++ KAI+LD
Sbjct: 592 QGVVFSKLRRYNEALVCADKAIELDPNYGLVWNYQGWVLGQLERYDEALTSYDKAIELDP 651
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ W + +L + ++ LE + + + ++ S + R L L + + I L
Sbjct: 652 TDADGWFNRGWLLGELGSYDEGLESCDKAIELGEQSSFVFLNRAEYLLALNRWEDGIAAL 711
Query: 609 SSGL 612
L
Sbjct: 712 DKAL 715
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV----------------- 492
E W +G LG EA+ SKA++ +PN RGI
Sbjct: 451 EDWLEQGYCLGVLGRIEEALASFSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKG 510
Query: 493 -------NFKFKDFNAAVEDLS----------ACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ +++ A + +L ++L+ N +A G AL ++G Y++
Sbjct: 511 LELNPNESITWRNRGATLGNLGRHEDALISYDKAIELEPANANALINRGAALGNLGRYEE 570
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A ++ KAI+LD A + + L +AL C + + +D + ++ +G +L
Sbjct: 571 ALVSYDKAIELDPTNANALINQGVVFSKLRRYNEALVCADKAIELDPNYGLVWNYQGWVL 630
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L ++ +A+ + +DP++ + + R +G Y E +
Sbjct: 631 GQLERYDEALTSYDKAIELDPTDADGWFNRGWLLGELGSYDEGL 674
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G L +G ++A + KAI+LD N AW + + L E+AL + L ++
Sbjct: 457 GYCLGVLGRIEEALASFSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKGLELNPN 516
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
S + RG L LG+H+ A+ + ++P+N L R + +G Y EA++
Sbjct: 517 ESITWRNRGATLGNLGRHEDALISYDKAIELEPANANALINRGAALGNLGRYEEALV 573
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%)
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ S +KLD A+ G+AL + Y++A + K ++L+ N W +
Sbjct: 469 ALASFSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKGLELNPNESITWRNRGATL 528
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+L E AL + + ++ + A RG L LG++++A+ + +DP+N
Sbjct: 529 GNLGRHEDALISYDKAIELEPANANALINRGAALGNLGRYEEALVSYDKAIELDPTNANA 588
Query: 622 LYLRASCYHAIGEYREAVI 640
L + + + Y EA++
Sbjct: 589 LINQGVVFSKLRRYNEALV 607
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 51 NWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
N+++A++I L+A I+D + +C L + + KA++LDP A+ +G
Sbjct: 432 NFAQALQIAQELVAIRGHIEDWLEQGYCLGVLGRIEEALASFSKAIKLDPNEPIAWFNRG 491
Query: 111 CAFSALGRKEEALSVWEKGYE 131
A L R EEAL+ + KG E
Sbjct: 492 IALRCLERYEEALASFNKGLE 512
>gi|119510384|ref|ZP_01629518.1| Serine/Threonine protein kinase with TPR repeats [Nodularia
spumigena CCY9414]
gi|119464913|gb|EAW45816.1| Serine/Threonine protein kinase with TPR repeats [Nodularia
spumigena CCY9414]
Length = 671
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AA+ +FT+AI + A+ +RG A LG+ +A D +KA+E P +A+ ++RG
Sbjct: 330 QAAVENFTQAIALDSENASAYNKRGNAFYQLGDYQQAKADTTKAIELNPQNANAYYDRGF 389
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ + A+ D + ++L+ N AY GLAL + E + A E AI+L N++
Sbjct: 390 ALYELGKYKEAISDYTKAIELNSGNAYAYYGRGLALVQMQENRDANEDFSTAIRLQPNYI 449
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA+ + L A + ++ I+ ++ Y+ +GL+ Q AIK+ +
Sbjct: 450 EAYLQRGILRRRLKIYRTANQDFDAIIKINPDDARPYYQKGLIQASNNQKYAAIKEYTQA 509
Query: 612 LGIDPSNIECLYLRASCYHA 631
+ +P N YLR H+
Sbjct: 510 INRNP-NYAVAYLRRGNMHS 528
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
++ L RGI + Y +A FD I+K +P +G +A + AAI ++T+
Sbjct: 449 IEAYLQRGILRRRLKIYRTANQDFDAIIKINPDDARPYYQKGLIQASNNQKYAAIKEYTQ 508
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
AI NP+ A+ RRG + LG +EA +D ++ L+ P + RGI F D+
Sbjct: 509 AINRNPNYAVAYLRRGNMHSELGYKLEATEDYNRVLQLNPQWGAAYNHRGIHRLSFGDYQ 568
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+ D + ++L+ ++ +AY G A G YK A E + +AI ++ + A+
Sbjct: 569 GAIADHTKAIELNSQDAAAYNNRGNANYQQGNYKAANEDYTQAIAINSKYGLAY 622
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 120/252 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G Y A + + ++ +P A RG A + + AISD+T+AI+ N
Sbjct: 353 RGNAFYQLGDYQQAKADTTKAIELNPQNANAYYDRGFALYELGKYKEAISDYTKAIELNS 412
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG A + E+ +A +D S A+ +PN + +RGI+ + K + A +D
Sbjct: 413 GNAYAYYGRGLALVQMQENRDANEDFSTAIRLQPNYIEAYLQRGILRRRLKIYRTANQDF 472
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
A +K++ ++ Y GL +S + A + + +AI + N+ A+ + +L
Sbjct: 473 DAIIKINPDDARPYYQKGLIQASNNQKYAAIKEYTQAINRNPNYAVAYLRRGNMHSELGY 532
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A E +VL ++ ++ AY+ RG+ G ++ AI D + + ++ + R
Sbjct: 533 KLEATEDYNRVLQLNPQWGAAYNHRGIHRLSFGDYQGAIADHTKAIELNSQDAAAYNNRG 592
Query: 627 SCYHAIGEYREA 638
+ + G Y+ A
Sbjct: 593 NANYQQGNYKAA 604
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSN 445
+G+ Q + + +AI + Q + +P Y A + RG + +LEA D+ +Q N
Sbjct: 489 KGLIQASNNQKYAAIKEYTQAINRNPNYAVAYLRRGNMHSELGYKLEAT-EDYNRVLQLN 547
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P G A+ RG R + G+ AI D +KA+E A + RG N++ ++ AA ED
Sbjct: 548 PQWGAAYNHRGIHRLSFGDYQGAIADHTKAIELNSQDAAAYNNRGNANYQQGNYKAANED 607
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+ + ++ + AY G+ + G + A +AI+L R
Sbjct: 608 YTQAIAINSKYGLAYYNRGVTRAKQGNRQGAIADFQQAIRLFR 650
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L++ G+ ++ ++ AAVE+ + + LD EN SAY G A +G+Y++A+ KAI+
Sbjct: 316 LYQEGLKKYQAGNYQAAVENFTQAIALDSENASAYNKRGNAFYQLGDYQQAKADTTKAIE 375
Query: 546 L---------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
L DR F A L ++ + +++ KA+E ++ + AY+ RGL L
Sbjct: 376 LNPQNANAYYDRGF--ALYELGKYKEAISDYTKAIE-------LNSGNAYAYYGRGLALV 426
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ +++ A +D S+ + + P+ IE R + YR A
Sbjct: 427 QMQENRDANEDFSTAIRLQPNYIEAYLQRGILRRRLKIYRTA 468
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)
Query: 351 KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE 410
K+ +KE + RN + V L RG G A ++++L+
Sbjct: 499 KYAAIKEYTQAINRNPNYAVAY------------LRRGNMHSELGYKLEATEDYNRVLQL 546
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P + A RG R + + AI+D T+AI+ N A+ RG A G A +
Sbjct: 547 NPQWGAAYNHRGIHRLSFGDYQGAIADHTKAIELNSQDAAAYNNRGNANYQQGNYKAANE 606
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
D ++A+ + RG+ K + A+ D ++L +E
Sbjct: 607 DYTQAIAINSKYGLAYYNRGVTRAKQGNRQGAIADFQQAIRLFRE 651
>gi|425458571|ref|ZP_18838059.1| exported hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389827136|emb|CCI21817.1| exported hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 695
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 5/178 (2%)
Query: 404 FDQIL-KEDPMYPEA---LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
FD L KE+ P + GRG AR + ++ + +ISD+ EAI+ NP A++ R AR
Sbjct: 489 FDVTLTKENIAVPRSASIYFGRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADAR 548
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNF-KFKDFNAAVEDLSACVKLDKENKS 518
LGE EAI+DL++A+ P A RG ++ +FK + A++D + + D +
Sbjct: 549 DELGEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQALLNDPQYHI 608
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY GL +G+ + A H + I+L ++ A+ + Y+DL KALE ++
Sbjct: 609 AYFERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKK 666
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ GI++ N G Y AI+ ++++L+ P +A + RG A Q + +AAI+D TE I+
Sbjct: 243 LTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKL 302
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG AR ++ A++D S A+ +P + + RG V + ++ A+
Sbjct: 303 NPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
D + ++LD + AY G A S+ +Y+ A + +A+ NFLE G Q+
Sbjct: 363 DYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL----NFLEYSGLGFQY 414
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
R+ + +VD L RGIA + + KY +AI+ +++K +P A RG AR +
Sbjct: 261 AYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPNNSRAYFWRGLARDYS 320
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ D++ AI+ +P A+ RG A LGE +AI D ++A+ +P+
Sbjct: 321 EDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYEN 380
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL 512
RG + KD+ A+ D + +
Sbjct: 381 RGDARYSLKDYQGAISDYTQALNF 404
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%)
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G ++A G EAI ++ L+ PN+ D +RGI + + AA+ D++ +KL+
Sbjct: 246 GISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPN 305
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N AY + GLA + + A E + AI+LD + A+ + Y +L +KA+
Sbjct: 306 NSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYT 365
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ + +D AY RG + L ++ AI D + L
Sbjct: 366 EAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL 402
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L+ G ++A E AI+ + +Q +P+ +A+ +RG A + AI D+++
Sbjct: 240 EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEV 299
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN++ RG+ +D A+ED S ++LD E AY G + +GEY+K
Sbjct: 300 IKLNPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQK 359
Query: 536 AEEAHLKAIQLDRNFLEAW 554
A + +AI+LD + A+
Sbjct: 360 AILDYTEAIRLDPDVFLAY 378
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ +S S+ F RG A+ Y +IS +++ +K +P Y A R AR E +
Sbjct: 498 IAVPRSASIYF--GRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQ 555
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSADILHERGI 491
AI D +AI NP A+ RG + ++ EA++D ++AL +P ERG+
Sbjct: 556 EAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQALLNDPQYHIAYFERGL 615
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++ + D A+ D + ++L + +AY GL+ +GE KA E KA +L
Sbjct: 616 IHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAEL 670
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 63/118 (53%)
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG++ ++ G Y++A A+ + +Q+ N ++A+ Y + + A+ + +V+ ++
Sbjct: 245 LGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNP 304
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
S+AY RGL ++ A++D S + +DP R + Y +GEY++A++
Sbjct: 305 NNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 121/289 (41%), Gaps = 42/289 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y AI + + ++ DP A RG AR ++ + AISD+T+A+
Sbjct: 346 NRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQALNFL 405
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--NSADILHERGIVNFKFKDFNAAV 503
+G ++ R R G+ + ++K E P IL + I N +
Sbjct: 406 EYSGLGFQYR---RHESGQGL----IITKIFENSPAFKQGLILDDLIIAINGKSTLNKSA 458
Query: 504 EDLSAC--------------------------VKLDKEN----KSAYTYLGL--ALSSIG 531
EDL V L KEN +SA Y G A +
Sbjct: 459 EDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAVPRSASIYFGRGNARYYLK 518
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+YK + + +AI+ + + A+ +L ++A++ L Q + ++ + ++AY LR
Sbjct: 519 DYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKDLNQAISLNPKDARAYFLR 578
Query: 592 GLL-LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G + + +++A+KD + L DP + R + +G+ R A+
Sbjct: 579 GWIHSNRFKAYQEALKDYNQALLNDPQYHIAYFERGLIHRELGDNRGAI 627
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWK 453
G++ AI +Q + +P A RG + + + + A+ D+ +A+ ++P A+
Sbjct: 552 GEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQALLNDPQYHIAYF 611
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG LG++ AI D ++ + P+ A+ + RG+ + A+ED +L
Sbjct: 612 ERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAELY 671
Query: 514 KE 515
K+
Sbjct: 672 KQ 673
>gi|425460012|ref|ZP_18839498.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
[Microcystis aeruginosa PCC 9808]
gi|389827371|emb|CCI21411.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
[Microcystis aeruginosa PCC 9808]
Length = 944
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 6/217 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A N G++ AI+ +D+ L+ P Y EA RG+A E AI+ + A++
Sbjct: 189 NRGVALGNLGRFEEAIASYDRALEIKPDYYEAWNNRGSALHNLGRFEEAIASYDRALEIK 248
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG EAI +ALE +P+ D + RGI F A+
Sbjct: 249 PDKHEAWHNRGSALHNLGRFEEAIASWDRALEIKPDYPDAWYGRGIALDDLGRFEQAIAS 308
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ + A+ G+AL +G +++A ++ +A+++ + EAW + + L+
Sbjct: 309 YDRALEIKPDKHEAWNNRGVALDDLGRFEQAIASYDRALEIKPDDHEAWYNRGRAVCSLS 368
Query: 566 NSEKALECLQQVLY------IDKRFSKAYHLRGLLLH 596
+ + L+ ++Y ++ R + LR L H
Sbjct: 369 KNRVSTPSLEALIYRKPIVALNDREPHIFALREALPH 405
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
+F +G + G + AI+ +D+ L+ P EA RG A E AI+ + A
Sbjct: 151 EFWFVQGYQKYMNGDFIGAIASWDRALEIKPDKHEAWNNRGVALGNLGRFEEAIASYDRA 210
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P EAW RG A LG EAI +ALE +P+ + H RG F
Sbjct: 211 LEIKPDYYEAWNNRGSALHNLGRFEEAIASYDRALEIKPDKHEAWHNRGSALHNLGRFEE 270
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ +++ + A+ G+AL +G +++A ++ +A+++ + EAW +
Sbjct: 271 AIASWDRALEIKPDYPDAWYGRGIALDDLGRFEQAIASYDRALEIKPDKHEAWNNRGVAL 330
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
DL E+A+ + L I +A++ RG
Sbjct: 331 DDLGRFEQAIASYDRALEIKPDDHEAWYNRG 361
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E +G + + AI+ + A++ P EAW RG A LG EAI +A
Sbjct: 151 EFWFVQGYQKYMNGDFIGAIASWDRALEIKPDKHEAWNNRGVALGNLGRFEEAIASYDRA 210
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
LE +P+ + + RG F A+ +++ + A+ G AL ++G +++
Sbjct: 211 LEIKPDYYEAWNNRGSALHNLGRFEEAIASYDRALEIKPDKHEAWHNRGSALHNLGRFEE 270
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + +A+++ ++ +AW DL E+A+ + L I +A++ RG+ L
Sbjct: 271 AIASWDRALEIKPDYPDAWYGRGIALDDLGRFEQAIASYDRALEIKPDKHEAWNNRGVAL 330
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
LG+ ++AI L I P + E Y R
Sbjct: 331 DDLGRFEQAIASYDRALEIKPDDHEAWYNRG 361
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 4/204 (1%)
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+D TE +Q E W +G + G+ + AI +ALE +P+ + + RG+
Sbjct: 141 TDLTEVVQD----AEFWFVQGYQKYMNGDFIGAIASWDRALEIKPDKHEAWNNRGVALGN 196
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
F A+ +++ + A+ G AL ++G +++A ++ +A+++ + EAW
Sbjct: 197 LGRFEEAIASYDRALEIKPDYYEAWNNRGSALHNLGRFEEAIASYDRALEIKPDKHEAWH 256
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ +L E+A+ + L I + A++ RG+ L LG+ ++AI L I
Sbjct: 257 NRGSALHNLGRFEEAIASWDRALEIKPDYPDAWYGRGIALDDLGRFEQAIASYDRALEIK 316
Query: 616 PSNIECLYLRASCYHAIGEYREAV 639
P E R +G + +A+
Sbjct: 317 PDKHEAWNNRGVALDDLGRFEQAI 340
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RGIA + G++ AI+ +D+ L+ P EA RG A E AI+ + A
Sbjct: 287 DAWYGRGIALDDLGRFEQAIASYDRALEIKPDKHEAWNNRGVALDDLGRFEQAIASYDRA 346
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ P EAW RG+A +L ++ + L + +P A L++R F +
Sbjct: 347 LEIKPDDHEAWYNRGRAVCSLSKNRVSTPSLEALIYRKPIVA--LNDREPHIFALR---- 400
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
E L ++ Y YLG A YK+
Sbjct: 401 --EALPHLIQGSPPWGQIYRYLGEAYLGHSRYKE 432
>gi|374386594|ref|ZP_09644093.1| hypothetical protein HMPREF9449_02479 [Odoribacter laneus YIT
12061]
gi|373223767|gb|EHP46112.1| hypothetical protein HMPREF9449_02479 [Odoribacter laneus YIT
12061]
Length = 657
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y SAI F+ I++ P E RG A+ + E AI+D+T+AI NP+ A+ RG
Sbjct: 43 YVSAIDNFNNIIRIKPYLSEPYFFRGLAKMNLDDYEGAIADYTQAIDLNPNYFYAYMYRG 102
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A L + EA++D ++A+ +P+ A + RGI + D+ A +D S + +D +
Sbjct: 103 IAYHNLRKFKEAMRDYNEAITLDPSDAYVYANRGITKAETGDYKGAEKDYSKSLMIDNKL 162
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+AY + + + + A AI+L+ +A+G + + A+E +
Sbjct: 163 LAAYLNRAIMREKLDDPEGAMADCNAAIKLNMFSDDAFGLRGYLWYKQKDYHNAIEDYNR 222
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L + + K R ++ + + + A+KD + ID + I Y RA +G+Y
Sbjct: 223 ALKANPKNKKILMSRAIVWYEMKKFPDALKDYGEIIKIDSTYIYAYYNRAMLRAEVGDYN 282
Query: 637 EAV 639
A+
Sbjct: 283 NAI 285
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 14/256 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++N Y AI+ + Q + +P Y A + RG A R+ + A+ D+ EAI +P
Sbjct: 67 RGLAKMNLDDYEGAIADYTQAIDLNPNYFYAYMYRGIAYHNLRKFKEAMRDYNEAITLDP 126
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S + RG +A G+ A +D SK+L + R I+ K D A+ D
Sbjct: 127 SDAYVYANRGITKAETGDYKGAEKDYSKSLMIDNKLLAAYLNRAIMREKLDDPEGAMADC 186
Query: 507 SACVKLDKENKSAYTYLGLAL-------SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+A +KL+ + A+ G ++I +Y +A +A+ K ++ + W + +
Sbjct: 187 NAAIKLNMFSDDAFGLRGYLWYKQKDYHNAIEDYNRALKANPKNKKILMSRAIVWYEMKK 246
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
F AL+ +++ ID + AY+ R +L +G + AI DL + +P NI
Sbjct: 247 F-------PDALKDYGEIIKIDSTYIYAYYNRAMLRAEVGDYNNAISDLDKVVETNPDNI 299
Query: 620 ECLYLRASCYHAIGEY 635
+ R I +Y
Sbjct: 300 LIYFNRGLLKMEIKDY 315
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 9/234 (3%)
Query: 316 ASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK 375
A D + YSKS + DNK + +R+ +++E ++ + C I K
Sbjct: 140 AETGDYKGAEKDYSKSLMIDNKLLAAYLNRA-------IMREKLDDPEGAMADCNAAI-K 191
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
S D RG + Y +AI +++ LK +P + L+ R ++ A+
Sbjct: 192 LNMFSDDAFGLRGYLWYKQKDYHNAIEDYNRALKANPKNKKILMSRAIVWYEMKKFPDAL 251
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D+ E I+ + + A+ R RA +G+ AI DL K +E P++ I RG++ +
Sbjct: 252 KDYGEIIKIDSTYIYAYYNRAMLRAEVGDYNNAISDLDKVVETNPDNILIYFNRGLLKME 311
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ-LDR 548
KD+ A ED S ++L + AY +++ Y A+E H +A+ +DR
Sbjct: 312 IKDYAGAYEDFSESIRLYPDFVKAYLARAAVNNALQHYAAADEDHGRALAVMDR 365
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + G Y A + + L D A + R R + E A++D AI+ N
Sbjct: 134 NRGITKAETGDYKGAEKDYSKSLMIDNKLLAAYLNRAIMREKLDDPEGAMADCNAAIKLN 193
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG + AI+D ++AL+ P + IL R IV ++ K F A++D
Sbjct: 194 MFSDDAFGLRGYLWYKQKDYHNAIEDYNRALKANPKNKKILMSRAIVWYEMKKFPDALKD 253
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+D AY + + +G+Y A K ++ + + + + + ++
Sbjct: 254 YGEIIKIDSTYIYAYYNRAMLRAEVGDYNNAISDLDKVVETNPDNILIYFNRGLLKMEIK 313
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ A E + + + F KAY R + + L + A +D L +
Sbjct: 314 DYAGAYEDFSESIRLYPDFVKAYLARAAVNNALQHYAAADEDHGRALAV 362
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 14/192 (7%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E I + I P+A + + RG E +AI+D E EPN L +
Sbjct: 467 IEENIQQLSSKITQQPTADD-YLLRGIFYMNSREYPKAIEDFMAVNELEPNHILALFNQA 525
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ D+ ++ED V++ E K + I +Y + E + K +++D F
Sbjct: 526 NARMQMLDYIESIED--NTVEVIGEEKQ--------VKRIIDYSQVLEGYRKCLEIDPAF 575
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ A ++ Y ++A+E +V+ DK F++AY RGLL G+ +A DLS
Sbjct: 576 IFALYNIGNVYVKSEKIDQAIEAYSEVIRQDKEFAEAYFNRGLLYIYTGRKAEANADLSK 635
Query: 611 G--LG-IDPSNI 619
LG ID NI
Sbjct: 636 AGELGIIDAYNI 647
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 60/120 (50%)
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
F D+ +A+++ + +++ Y + GLA ++ +Y+ A + +AI L+ N+ A+
Sbjct: 40 FDDYVSAIDNFNNIIRIKPYLSEPYFFRGLAKMNLDDYEGAIADYTQAIDLNPNYFYAYM 99
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ Y +L ++A+ + + +D + Y RG+ G +K A KD S L ID
Sbjct: 100 YRGIAYHNLRKFKEAMRDYNEAITLDPSDAYVYANRGITKAETGDYKGAEKDYSKSLMID 159
>gi|425471352|ref|ZP_18850212.1| exported hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389882767|emb|CCI36788.1| exported hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 695
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 404 FDQIL-KEDPMYPEA---LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
FD L KE+ P + GRG AR + ++ + +ISD+ EAI+ NP A++ R AR
Sbjct: 489 FDVTLTKENIAVPRSASIYFGRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADAR 548
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNF-KFKDFNAAVEDLSACVKLDKENKS 518
LGE EAI+DL++A+ P A RG ++ +FK + A++D + + D + +
Sbjct: 549 DELGEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRI 608
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY GL +G+ + A + + I+L ++ A+ + Y+DL KALE ++
Sbjct: 609 AYFERGLIHRELGDNRGAINDYTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKK 666
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ GI++ N G Y AI+ ++++L+ P +A + RG A Q + +AAI+D TE I+
Sbjct: 243 LTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKL 302
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG AR ++ A++D S A+ +P + + RG V + ++ A+
Sbjct: 303 NPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
D + ++LD + AY G A S+ +Y+ A + +A+ NFLE G Q+
Sbjct: 363 DYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL----NFLEYSGLGFQY 414
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
R+ + +VD L RGIA + + KY +AI+ +++K +P A RG AR +
Sbjct: 261 AYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPNNSRAYFWRGLARDYS 320
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + A+ D++ AI+ +P A+ RG A LGE +AI D ++A+ +P+
Sbjct: 321 EDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYEN 380
Query: 489 RGIVNFKFKDFNAAVEDLSACVKL 512
RG + KD+ A+ D + +
Sbjct: 381 RGDARYSLKDYQGAISDYTQALNF 404
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%)
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G ++A G EAI ++ L+ PN+ D +RGI + + AA+ D++ +KL+
Sbjct: 246 GISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPN 305
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N AY + GLA + + A E + AI+LD + A+ + Y +L +KA+
Sbjct: 306 NSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYT 365
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ + +D AY RG + L ++ AI D + L
Sbjct: 366 EAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL 402
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E L+ G ++A E AI+ + +Q +P+ +A+ +RG A + AI D+++
Sbjct: 240 EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEV 299
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ PN++ RG+ +D A+ED S ++LD E AY G + +GEY+K
Sbjct: 300 IKLNPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQK 359
Query: 536 AEEAHLKAIQLDRNFLEAW 554
A + +AI+LD + A+
Sbjct: 360 AILDYTEAIRLDPDVFLAY 378
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+ +S S+ F RG A+ Y +IS +++ +K +P Y A R AR E +
Sbjct: 498 IAVPRSASIYF--GRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQ 555
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSADILHERGI 491
AI D +AI NP A+ RG + ++ EA++D ++A+ +P ERG+
Sbjct: 556 EAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRIAYFERGL 615
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
++ + D A+ D + ++L + +AY GL+ +GE KA E KA +L
Sbjct: 616 IHRELGDNRGAINDYTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAEL 670
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 63/118 (53%)
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG++ ++ G Y++A A+ + +Q+ N ++A+ Y + + A+ + +V+ ++
Sbjct: 245 LGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNP 304
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
S+AY RGL ++ A++D S + +DP R + Y +GEY++A++
Sbjct: 305 NNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 42/289 (14%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y AI + + ++ DP A RG AR ++ + AISD+T+A+
Sbjct: 346 NRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQALNFL 405
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--NSADILHERGIVNFKFKDFNAAV 503
+G ++ R R G+ + ++K E P IL + I N +
Sbjct: 406 EYSGLGFQYR---RHESGQGL----IITKIFENSPAFKQGLILDDLIIAINGKSTLNKSA 458
Query: 504 EDLSAC--------------------------VKLDKEN----KSAYTYLGL--ALSSIG 531
EDL V L KEN +SA Y G A +
Sbjct: 459 EDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAVPRSASIYFGRGNARYYLK 518
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+YK + + +AI+ + + A+ +L ++A++ L Q + ++ + ++AY LR
Sbjct: 519 DYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKDLNQAISLNPKDARAYFLR 578
Query: 592 GLL-LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G + + +++A+KD + + DP + R + +G+ R A+
Sbjct: 579 GWIHSNRFKAYQEALKDYNQAILNDPQYRIAYFERGLIHRELGDNRGAI 627
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWK 453
G++ AI +Q + +P A RG + + + + A+ D+ +AI ++P A+
Sbjct: 552 GEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRIAYF 611
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG LG++ AI D ++ + P+ A+ + RG+ + A+ED +L
Sbjct: 612 ERGLIHRELGDNRGAINDYTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAELY 671
Query: 514 KE 515
K+
Sbjct: 672 KQ 673
>gi|226949281|ref|YP_002804372.1| hypothetical protein CLM_2200 [Clostridium botulinum A2 str. Kyoto]
gi|226841728|gb|ACO84394.1| tetratricopeptide repeat family protein [Clostridium botulinum A2
str. Kyoto]
Length = 251
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ +++ I +T +I+ PS +A+ R + LGE ++I D +K LE P D
Sbjct: 34 YSYDIKDKIKFYTISIKLKPSFIDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCY 93
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ R IV + K+++ +++DL V +DK K+ Y G+ I +YK+A KAI
Sbjct: 94 NNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIH- 152
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+DLA+SE AY R + L ++ +IK
Sbjct: 153 ---------------EDLADSE------------------AYENRAFTYYNLKKYSSSIK 179
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D ++ L + P N R + Y+ I Y +A+
Sbjct: 180 DYTNALKLTPENKNIYLSRGTIYYKIKNYEDAI 212
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 60/135 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I Y ++ D ++ D Y RG + + A +FT+AI +
Sbjct: 95 NRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHED 154
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ EA++ R L + +I+D + AL+ P + +I RG + +K K++ A+ D
Sbjct: 155 LADSEAYENRAFTYYNLKKYSSSIKDYTNALKLTPENKNIYLSRGTIYYKIKNYEDAISD 214
Query: 506 LSACVKLDKENKSAY 520
+ +++ S Y
Sbjct: 215 YMKALNCKEKDPSFY 229
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 93/225 (41%), Gaps = 10/225 (4%)
Query: 322 NTNSESYSKSSISDNK-SSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSIS 380
N N +K S+ NK S++ + S + +D+ K KF I K K
Sbjct: 5 NFNEFKLAKKSVKKNKYESNAEKFFSNAYYSYDI--------KDKIKFYTISI-KLKPSF 55
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D +R G+Y +I+ +++IL+ +P + R + + ++ D
Sbjct: 56 IDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCYNNRAIVYYLIKNYDKSLQDLDV 115
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
+ + + RG + + A + +KA+ + ++ R + K ++
Sbjct: 116 LVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHEDLADSEAYENRAFTYYNLKKYS 175
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
++++D + +KL ENK+ Y G I Y+ A ++KA+
Sbjct: 176 SSIKDYTNALKLTPENKNIYLSRGTIYYKIKNYEDAISDYMKALN 220
>gi|17988679|ref|NP_541312.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|17984487|gb|AAL53576.1| tetratricopeptide repeat family protein [Brucella melitensis bv. 1
str. 16M]
Length = 255
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 46 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 105
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 106 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 164
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 165 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 224
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 225 DKAKAANSYARAVQLDPKYKPA 246
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 34/204 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 26 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 85
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 86 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 121
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S + +
Sbjct: 122 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 171
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
+ + E R Y A+G+Y A
Sbjct: 172 NSTAPEPYNGRGISYVALGDYDNA 195
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
IS +++ +P PE RG+A + A+ DF +AI NP+ +A+ R
Sbjct: 26 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 85
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+G++ +A+QD S+A++ P RG V + + A+ D + + L + AY
Sbjct: 86 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAY 145
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL + G +K+A E KAI L+ E + Y L + + A + + +
Sbjct: 146 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 205
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
D+ ++++ + L+ G KA + + +DP
Sbjct: 206 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 241
>gi|440683182|ref|YP_007157977.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428680301|gb|AFZ59067.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 534
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 114/234 (48%), Gaps = 6/234 (2%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K + ++ ++L G+ G Y AI + Q + + Y +A RG A + A
Sbjct: 270 KHQDANIYYKL--GLVYHQLGDYKKAIIDYSQAINININYSQAYNKRGLAHYQLGNYQTA 327
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I D+ +AI+ NP ++ R +AR+ +G+ AI+D ++A++ P A R I +
Sbjct: 328 IEDYNQAIRINPDVAVNYRNRAEARSHIGDHQGAIEDYNQAIKINPLDAITQKNREITRY 387
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D V + +K+ ++ AY G G Y+ A E + +AIQ++ N+ +A+
Sbjct: 388 LLDDQQKLVPE----IKIAPDDAVAYKNRGNTRLECGNYEGAIEDYNQAIQINPNYADAY 443
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + DL N E A++ +V+ + ++ AY+ RG + +G + AI+D
Sbjct: 444 YNRGNAHSDLGNYEAAIDDFSKVIKVKSNYTDAYYNRGNVRLIIGDKQGAIEDF 497
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 9/209 (4%)
Query: 373 ISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
I S++I+++ S RG+A G Y +AI ++Q ++ +P R AR+
Sbjct: 295 IDYSQAINININYSQAYNKRGLAHYQLGNYQTAIEDYNQAIRINPDVAVNYRNRAEARSH 354
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + AI D+ +AI+ NP K R R L + Q L ++ P+ A
Sbjct: 355 IGDHQGAIEDYNQAIKINPLDAITQKNREITRYLLDDQ----QKLVPEIKIAPDDAVAYK 410
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG + ++ A+ED + ++++ AY G A S +G Y+ A + K I++
Sbjct: 411 NRGNTRLECGNYEGAIEDYNQAIQINPNYADAYYNRGNAHSDLGNYEAAIDDFSKVIKVK 470
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQ 576
N+ +A+ + + + + A+E QQ
Sbjct: 471 SNYTDAYYNRGNVRLIIGDKQGAIEDFQQ 499
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 112/252 (44%), Gaps = 16/252 (6%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G YA+AI+ ++Q L++ G + + AI D+++AI N + +A+
Sbjct: 253 KGDYAAAINNYNQALQDKHQDANIYYKLGLVYHQLGDYKKAIIDYSQAINININYSQAYN 312
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+RG A LG AI+D ++A+ P+ A R D A+ED + +K++
Sbjct: 313 KRGLAHYQLGNYQTAIEDYNQAIRINPDVAVNYRNRAEARSHIGDHQGAIEDYNQAIKIN 372
Query: 514 ------KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++N+ YL ++ + I++ + A+ + + N
Sbjct: 373 PLDAITQKNREITRYL----------LDDQQKLVPEIKIAPDDAVAYKNRGNTRLECGNY 422
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E A+E Q + I+ ++ AY+ RG LG ++ AI D S + + + + Y R +
Sbjct: 423 EGAIEDYNQAIQINPNYADAYYNRGNAHSDLGNYEAAIDDFSKVIKVKSNYTDAYYNRGN 482
Query: 628 CYHAIGEYREAV 639
IG+ + A+
Sbjct: 483 VRLIIGDKQGAI 494
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 68/136 (50%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
NS I + G F+ D+ AA+ + + ++ ++ + Y LGL +G+YKKA +
Sbjct: 238 NSTLIYEKLGDKYFQKGDYAAAINNYNQALQDKHQDANIYYKLGLVYHQLGDYKKAIIDY 297
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI ++ N+ +A+ + L N + A+E Q + I+ + Y R +G
Sbjct: 298 SQAINININYSQAYNKRGLAHYQLGNYQTAIEDYNQAIRINPDVAVNYRNRAEARSHIGD 357
Query: 601 HKKAIKDLSSGLGIDP 616
H+ AI+D + + I+P
Sbjct: 358 HQGAIEDYNQAIKINP 373
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 30/218 (13%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+++ G G+ AI + ++AL+ + A+I ++ G+V + D+ A+ D S +
Sbjct: 243 YEKLGDKYFQKGDYAAAINNYNQALQDKHQDANIYYKLGLVYHQLGDYKKAIIDYSQAIN 302
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-------RNFLEAWGHLTQFYQDL 564
++ AY GLA +G Y+ A E + +AI+++ RN EA H+ +
Sbjct: 303 ININYSQAYNKRGLAHYQLGNYQTAIEDYNQAIRINPDVAVNYRNRAEARSHIGDHQGAI 362
Query: 565 ANSEKALECL-------------------QQVLYIDKRFSK----AYHLRGLLLHGLGQH 601
+ +A++ QQ L + + + AY RG G +
Sbjct: 363 EDYNQAIKINPLDAITQKNREITRYLLDDQQKLVPEIKIAPDDAVAYKNRGNTRLECGNY 422
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AI+D + + I+P+ + Y R + + +G Y A+
Sbjct: 423 EGAIEDYNQAIQINPNYADAYYNRGNAHSDLGNYEAAI 460
>gi|409407329|ref|ZP_11255780.1| TPR repeat-containing protein [Herbaspirillum sp. GW103]
gi|386433080|gb|EIJ45906.1| TPR repeat-containing protein [Herbaspirillum sp. GW103]
Length = 603
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L + +A +G+ A A ++ ++L + P + EA G + Q E EAA + +AI+
Sbjct: 12 LQKALALHQKGQLAPAEDLYKKVLAKLPRHFEANYLYGMLKLHQEEWEAAEAQLAKAIEL 71
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + + A LG EA++ ++ L P AD L RG + A+E
Sbjct: 72 NPDHPDTYFDHAGALVHLGRDAEAVERYNQILAQNPAFADALLARGAALRRLDLNREALE 131
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
DL V+L ++ A+ LG + Y+ A ++ +A+ L +F+EAW +L +D
Sbjct: 132 DLQQAVRLVPDHADAWFQLGNLQHELYSYRDARASYERAVALRPDFIEAWFNLGNACKDS 191
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+AL + L + F +A RG +L + + ++A++ L + S+ + +
Sbjct: 192 YQFEEALRAFDRALAVQPDFFEAQSNRGFVLFKMQRPEEALEAYDRALALSDSSPDLWFN 251
Query: 625 RASCYHAIGEYREA 638
RAS + + EA
Sbjct: 252 RASTLEQLSRFSEA 265
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 40/194 (20%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA---AISDFTEAIQSNP 446
A V+ G+ A A+ ++QIL ++P + +AL+ RG A R L+ A+ D +A++ P
Sbjct: 85 ALVHLGRDAEAVERYNQILAQNPAFADALLARGAAL---RRLDLNREALEDLQQAVRLVP 141
Query: 447 SAGEAWKRRGQ----------ARAALGESV------------------------EAIQDL 472
+AW + G ARA+ +V EA++
Sbjct: 142 DHADAWFQLGNLQHELYSYRDARASYERAVALRPDFIEAWFNLGNACKDSYQFEEALRAF 201
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+AL +P+ + RG V FK + A+E + L + + L +
Sbjct: 202 DRALAVQPDFFEAQSNRGFVLFKMQRPEEALEAYDRALALSDSSPDLWFNRASTLEQLSR 261
Query: 533 YKKAEEAHLKAIQL 546
+ +A +++ +A +L
Sbjct: 262 FSEASQSYQRAREL 275
>gi|167041835|gb|ABZ06576.1| putative TPR domain protein [uncultured marine microorganism
HF4000_097M14]
Length = 503
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
++K K+++ + I + A ++ + LK +P + E + G+ A +
Sbjct: 1 MNKKKNLTTKETFALAIQNHQKNNLQVAEKLYKETLKTNPNHIETIFLLGSLSAQTNNFD 60
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A F + IQ NP+ A G A LGE +AI KA++ PN A+ + GI
Sbjct: 61 KAKKFFKKVIQINPNHVTAHNNLGAALKELGEQKKAIDCYQKAIQINPNYANAHYNLGIA 120
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ + A+ ++++ +A+ LG+ +GE KKA + KAIQ++ N +
Sbjct: 121 FKELGELKKAIHCYQKAIQINPNYANAHYNLGIVFKELGELKKAIHCYQKAIQINPNHVA 180
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
A +L +++L +KA+ C Q+ + I+ A++ GL+ +GL + KKAI
Sbjct: 181 AHNNLGIVFKELGELKKAIHCYQKAIQINPNHVAAHNNLGLVFYGLSECKKAI 233
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 91/182 (50%)
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
+++ +P + A G A E + AI + +AIQ NP+ A G A LGE
Sbjct: 69 VIQINPNHVTAHNNLGAALKELGEQKKAIDCYQKAIQINPNYANAHYNLGIAFKELGELK 128
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
+AI KA++ PN A+ + GIV + + A+ ++++ + +A+ LG+
Sbjct: 129 KAIHCYQKAIQINPNYANAHYNLGIVFKELGELKKAIHCYQKAIQINPNHVAAHNNLGIV 188
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+GE KKA + KAIQ++ N + A +L + L+ +KA+ C ++ + I +S
Sbjct: 189 FKELGELKKAIHCYQKAIQINPNHVAAHNNLGLVFYGLSECKKAIGCYKKAIQIQSNYSD 248
Query: 587 AY 588
AY
Sbjct: 249 AY 250
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 3/193 (1%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ AI + + ++ +P Y A G A EL+ AI + +AIQ NP+ A
Sbjct: 91 GEQKKAIDCYQKAIQINPNYANAHYNLGIAFKELGELKKAIHCYQKAIQINPNYANAHYN 150
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G LGE +AI KA++ PN + GIV + + A+ ++++
Sbjct: 151 LGIVFKELGELKKAIHCYQKAIQINPNHVAAHNNLGIVFKELGELKKAIHCYQKAIQINP 210
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +A+ LGL + E KKA + KAIQ+ N+ +A+ +L D+ ++AL L
Sbjct: 211 NHVAAHNNLGLVFYGLSECKKAIGCYKKAIQIQSNYSDAYWNLHSLASDI---DEALTIL 267
Query: 575 QQVLYIDKRFSKA 587
+++ D +F KA
Sbjct: 268 KKLYEFDNKFIKA 280
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 75/131 (57%)
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++++ + +A+ LG AL +GE KKA + + KAIQ++ N+ A +L +++L +
Sbjct: 69 VIQINPNHVTAHNNLGAALKELGEQKKAIDCYQKAIQINPNYANAHYNLGIAFKELGELK 128
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
KA+ C Q+ + I+ ++ A++ G++ LG+ KKAI + I+P+++
Sbjct: 129 KAIHCYQKAIQINPNYANAHYNLGIVFKELGELKKAIHCYQKAIQINPNHVAAHNNLGIV 188
Query: 629 YHAIGEYREAV 639
+ +GE ++A+
Sbjct: 189 FKELGELKKAI 199
>gi|119484402|ref|ZP_01619019.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119457876|gb|EAW38999.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 566
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 9/258 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A + K+++A + + + ++ P +G A + E+A+ + A+Q P
Sbjct: 142 RGLALESTFKFSAAAASYKRAIEIKPDMSAIWYHQGNALMNEERYESAVESYDRAVQLQP 201
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG+ + EA+ +AL+ +P S RGI K + AV
Sbjct: 202 DNFEAWFNRGEMLMNQYKYSEAVASYDRALQLQPKSYQGWFNRGIALQKQHKYAEAVASY 261
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI----QLDRNFLEAWGHLTQFYQ 562
++L ++ A+ Y G+AL S + EA L +I Q++ + W Q
Sbjct: 262 EQVIQLQPQDYEAWFYKGMALKS-----QWPEAALSSIDQTLQMNPDSPAVWISRGQILL 316
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
DL A+ + I+ F +A+ RG+ L LGQ+++AI + L I+P +E
Sbjct: 317 DLQQYHSAIAAFDKATQINTNFPEAWLGRGIALCELGQYQEAIIAYDNALQIEPDFLEVW 376
Query: 623 YLRASCYHAIGEYREAVI 640
R + Y EAVI
Sbjct: 377 NCRGEALEQLDRYEEAVI 394
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG +N+ KY+ A++ +D+ L+ P + RG A Q + A++ + + IQ
Sbjct: 208 FNRGEMLMNQYKYSEAVASYDRALQLQPKSYQGWFNRGIALQKQHKYAEAVASYEQVIQL 267
Query: 445 NPSAGEAWKRRGQA-RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P EAW +G A ++ E+ A+ + + L+ P+S + RG + + +++A+
Sbjct: 268 QPQDYEAWFYKGMALKSQWPEA--ALSSIDQTLQMNPDSPAVWISRGQILLDLQQYHSAI 325
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+++ A+ G+AL +G+Y++A A+ A+Q++ +FLE W + +
Sbjct: 326 AAFDKATQINTNFPEAWLGRGIALCELGQYQEAIIAYDNALQIEPDFLEVWNCRGEALEQ 385
Query: 564 LANSEKALECLQQVLYIDKR----FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
L E+A+ +VL + ++A RG L L ++ +AI + + P N
Sbjct: 386 LDRYEEAVIAYDKVLLLTSENQTLATQAGLQRGEALEKLERYSEAIVAYKKVVRLRPDNF 445
Query: 620 EC 621
E
Sbjct: 446 EA 447
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 10/248 (4%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+A+S DQ L+ +P P I RG ++ +AI+ F +A Q N + EAW RG A
Sbjct: 289 AALSSIDQTLQMNPDSPAVWISRGQILLDLQQYHSAIAAFDKATQINTNFPEAWLGRGIA 348
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
LG+ EAI AL+ EP+ ++ + RG + + AV + L EN++
Sbjct: 349 LCELGQYQEAIIAYDNALQIEPDFLEVWNCRGEALEQLDRYEEAVIAYDKVLLLTSENQT 408
Query: 519 AYTYLGL----ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
T GL AL + Y +A A+ K ++L + EAW L Q + + A E
Sbjct: 409 LATQAGLQRGEALEKLERYSEAIVAYKKVVRLRPDNFEAWIKLGQACEQVQQYSSAFEAY 468
Query: 575 QQVLYIDKRFSKAYHLR---GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
Q + I + Y +R G +L Q+++AI + P E R +
Sbjct: 469 SQAIQI---WPDNYTVRLMLGRVLEATHQYQQAINTYDRIIQRQPDCCEAWIRRGQTFEQ 525
Query: 632 IGEYREAV 639
+ Y EA
Sbjct: 526 LQRYPEAF 533
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 106/231 (45%), Gaps = 2/231 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
++ +A +DQ ++ + + RG + R QR EA ++ + AI+ P W
Sbjct: 49 RFEAAFYHYDQAIQYKSDWYAGWLRRGNSLRKLQRYKEA-LASYDRAIKIKPKDYWGWTF 107
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + L EAI KA++ EPN+ + +ERG+ F+AA +++
Sbjct: 108 RGITLSKLERYPEAIASFDKAIKIEPNNFEAWYERGLALESTFKFSAAAASYKRAIEIKP 167
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + + + G AL + Y+ A E++ +A+QL + EAW + + + +A+
Sbjct: 168 DMSAIWYHQGNALMNEERYESAVESYDRAVQLQPDNFEAWFNRGEMLMNQYKYSEAVASY 227
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ L + + + + RG+ L ++ +A+ + + P + E + +
Sbjct: 228 DRALQLQPKSYQGWFNRGIALQKQHKYAEAVASYEQVIQLQPQDYEAWFYK 278
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 4/242 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+SRG ++ +Y SAI+ FD+ + + +PEA +GRG A + + AI + A+Q
Sbjct: 309 ISRGQILLDLQQYHSAIAAFDKATQINTNFPEAWLGRGIALCELGQYQEAIIAYDNALQI 368
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH----ERGIVNFKFKDFN 500
P E W RG+A L EA+ K L + + +RG K + ++
Sbjct: 369 EPDFLEVWNCRGEALEQLDRYEEAVIAYDKVLLLTSENQTLATQAGLQRGEALEKLERYS 428
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ V+L +N A+ LG A + +Y A EA+ +AIQ+ + L +
Sbjct: 429 EAIVAYKKVVRLRPDNFEAWIKLGQACEQVQQYSSAFEAYSQAIQIWPDNYTVRLMLGRV 488
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+ ++A+ +++ +A+ RG L ++ +A L + P++ E
Sbjct: 489 LEATHQYQQAINTYDRIIQRQPDCCEAWIRRGQTFEQLQRYPEAFASYGVALELKPNHSE 548
Query: 621 CL 622
+
Sbjct: 549 AI 550
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR---GTARAFQRELEAAISDFTE 440
+L + QV + Y+SA + Q ++ ++P+ R G + + AI+ +
Sbjct: 450 KLGQACEQVQQ--YSSAFEAYSQAIQ---IWPDNYTVRLMLGRVLEATHQYQQAINTYDR 504
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
IQ P EAW RRGQ L EA ALE +PN ++ + +R + K + N
Sbjct: 505 IIQRQPDCCEAWIRRGQTFEQLQRYPEAFASYGVALELKPNHSEAIAKRNQLLVKLQAGN 564
Query: 501 AA 502
A
Sbjct: 565 GA 566
>gi|306846174|ref|ZP_07478736.1| TPR domain-containing protein [Brucella inopinata BO1]
gi|306273425|gb|EFM55286.1| TPR domain-containing protein [Brucella inopinata BO1]
Length = 283
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 74 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 133
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 134 QYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 192
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 193 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 252
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 253 DKAKAANSYARAVQLDPKYKPA 274
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 83/204 (40%), Gaps = 34/204 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 54 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 149
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
G L Q AL Q + + +AYH RGL+ G HK+AI+D S + +
Sbjct: 150 GRLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 199
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
+ + E R Y A+G+Y A
Sbjct: 200 NSTAPEPYNGRGISYVALGDYDNA 223
>gi|254417207|ref|ZP_05030952.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196176013|gb|EDX71032.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 260
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 115/227 (50%), Gaps = 8/227 (3%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P ALIG Q + A+++ A Q P+ + + +A G+ AI DL++
Sbjct: 9 PAALIGTAIVWV-QPQFAVALTNLVVAQQ--PTV-QNLINSARIKAEKGDYQGAIADLTQ 64
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
AL+ PN+A+ H R ++ +++ A+ D + ++L+ ++ AY G+ S +G+Y+
Sbjct: 65 ALQLSPNNAESYHRRANAYYQLENYQGAIADYNQAIQLNPDDVKAYYNRGITHSHLGDYQ 124
Query: 535 KAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
A +AIQL+ +F A+ + L +F +L + + A+ Q + ++ ++ AY+ RG
Sbjct: 125 GAIADFNQAIQLNPDFAAAYYNRGLARF--NLGDDQGAIADYNQAIKLNPDYAIAYNNRG 182
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ LG + AI D + + +P N Y R Y +G+ +A+
Sbjct: 183 VARSNLGDDQGAIADFNQAIQRNPDNANVYYNRGVAYLNLGDQPKAL 229
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 108/209 (51%), Gaps = 1/209 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+++ + ++ + P + LI +A + + + AI+D T+A+Q +P+ E++ RR A
Sbjct: 25 AVALTNLVVAQQPTV-QNLINSARIKAEKGDYQGAIADLTQALQLSPNNAESYHRRANAY 83
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L AI D ++A++ P+ + RGI + D+ A+ D + ++L+ + +A
Sbjct: 84 YQLENYQGAIADYNQAIQLNPDDVKAYYNRGITHSHLGDYQGAIADFNQAIQLNPDFAAA 143
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GLA ++G+ + A + +AI+L+ ++ A+ + +L + + A+ Q +
Sbjct: 144 YYNRGLARFNLGDDQGAIADYNQAIKLNPDYAIAYNNRGVARSNLGDDQGAIADFNQAIQ 203
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + Y+ RG+ LG KA++D
Sbjct: 204 RNPDNANVYYNRGVAYLNLGDQPKALEDF 232
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + G Y AI+ F+Q ++ +P + A RG AR + + AI+D+ +AI+ N
Sbjct: 112 NRGITHSHLGDYQGAIADFNQAIQLNPDFAAAYYNRGLARFNLGDDQGAIADYNQAIKLN 171
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG AR+ LG+ AI D ++A++ P++A++ + RG+ D A+ED
Sbjct: 172 PDYAIAYNNRGVARSNLGDDQGAIADFNQAIQRNPDNANVYYNRGVAYLNLGDQPKALED 231
Query: 506 LSACVKLDKE--NKSAYTYL 523
L ++ N Y Y+
Sbjct: 232 FRQAATLFQQQGNTEIYQYI 251
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G Y AI+ Q L+ P E+ R A + AI+D+ +AIQ NP +A+
Sbjct: 52 KGDYQGAIADLTQALQLSPNNAESYHRRANAYYQLENYQGAIADYNQAIQLNPDDVKAYY 111
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + LG+ AI D ++A++ P+ A + RG+ F D A+ D + +KL+
Sbjct: 112 NRGITHSHLGDYQGAIADFNQAIQLNPDFAAAYYNRGLARFNLGDDQGAIADYNQAIKLN 171
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ AY G+A S++G+ + A +AIQ + + + + Y +L + KALE
Sbjct: 172 PDYAIAYNNRGVARSNLGDDQGAIADFNQAIQRNPDNANVYYNRGVAYLNLGDQPKALED 231
Query: 574 LQQ 576
+Q
Sbjct: 232 FRQ 234
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI+ ++Q ++ +P +A RG + + + AI+DF +AIQ NP A+ RG
Sbjct: 89 YQGAIADYNQAIQLNPDDVKAYYNRGITHSHLGDYQGAIADFNQAIQLNPDFAAAYYNRG 148
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR LG+ AI D ++A++ P+ A + RG+ D A+ D + ++ + +N
Sbjct: 149 LARFNLGDDQGAIADYNQAIKLNPDYAIAYNNRGVARSNLGDDQGAIADFNQAIQRNPDN 208
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ Y G+A ++G+ KA E +A L
Sbjct: 209 ANVYYNRGVAYLNLGDQPKALEDFRQAATL 238
>gi|119357637|ref|YP_912281.1| hypothetical protein Cpha266_1841 [Chlorobium phaeobacteroides DSM
266]
gi|119354986|gb|ABL65857.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
Length = 3035
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 117/241 (48%), Gaps = 2/241 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
A+ +FDQ + +P +P + RG A RA QR E A+ + +A+Q P +A+ RG
Sbjct: 863 ALVLFDQAISINPGHPGSRNNRGNALRALQR-YEEALDSYEKALQLKPDYVDAYTNRGSV 921
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
L EA+ +A+ +P+ + + +V K + A+ ++L +++
Sbjct: 922 LLELKRYEEALASYERAIAIKPDHTEFYSDLAVVLLALKRYEEALATYERVLELRRDDPV 981
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
Y G L + Y++A ++ KAI L+ ++ EA+ +L + L E+AL ++ +
Sbjct: 982 VYNNRGNVLLELKRYEEALGSYEKAIALNPDYAEAYSNLGVTRKVLKRDEEALGSYEKAI 1041
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ F+ AY+ R +L + L ++++A+ + + P +E R + + Y EA
Sbjct: 1042 ALKPDFADAYYNRAVLFYDLDRYEEALASYDRAIVLKPDFVEVFSNRGNALLKLKRYEEA 1101
Query: 639 V 639
+
Sbjct: 1102 L 1102
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 119/256 (46%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
+L R + EG+ A +++ +IL P + +AL T A + + E A+ F +AI
Sbjct: 813 KLQRALTLHQEGRLDEAEALYREILSSSPEHFDALQLSATIAAQRHDSEQALVLFDQAIS 872
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP + RG A AL EA+ KAL+ +P+ D RG V + K + A+
Sbjct: 873 INPGHPGSRNNRGNALRALQRYEEALDSYEKALQLKPDYVDAYTNRGSVLLELKRYEEAL 932
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ + ++ Y+ L + L ++ Y++A + + ++L R+ + + +
Sbjct: 933 ASYERAIAIKPDHTEFYSDLAVVLLALKRYEEALATYERVLELRRDDPVVYNNRGNVLLE 992
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L E+AL ++ + ++ +++AY G+ L + ++A+ + + P + Y
Sbjct: 993 LKRYEEALGSYEKAIALNPDYAEAYSNLGVTRKVLKRDEEALGSYEKAIALKPDFADAYY 1052
Query: 624 LRASCYHAIGEYREAV 639
RA ++ + Y EA+
Sbjct: 1053 NRAVLFYDLDRYEEAL 1068
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 4/251 (1%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSA 448
AQ NE + A+++FDQ L +P + +L RG A R+ QR E A+ F A+ P
Sbjct: 74 AQRNESE--KAVALFDQALNINPDHSGSLNNRGNALRSLQR-YEDALRSFERAVAVKPDY 130
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
+A+ RG L +A++ KA+ +P+ A RG + A+
Sbjct: 131 ADAYINRGNVLMELLRCEDALESFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEK 190
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+ L+ AY GLAL + Y A E + +AI L ++ EA+ H + L E
Sbjct: 191 AIALNPCFADAYYNKGLALQKLMRYDDALERYKQAIALKPDYTEAFLHQGNVFMALQRYE 250
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
AL + V+ ++ +AY RG L L ++ A+ L + + + R +
Sbjct: 251 NALLSYEHVIALNPDDVEAYTNRGYALQELKRYGDALLSYDRVLALKCDDADAYNNRGNA 310
Query: 629 YHAIGEYREAV 639
+ A+ Y +A+
Sbjct: 311 FMALKRYEDAL 321
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 108/241 (44%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+++FDQ L P + +L RG A + E A++ + + P A+ RG
Sbjct: 2323 ALALFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERLLAVKPDYAMAYSNRGNTL 2382
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
L EA+ +A+ ++A+ RG+ K K + A+E + L + A
Sbjct: 2383 QGLRRYEEAVSSYDQAIALRSDNANAYSNRGVAMMKLKRYADALESHDKAIALRPDYAEA 2442
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G L + Y++A ++ +AI L ++ E + + ++L E+AL +Q +
Sbjct: 2443 CSNRGNTLQELKRYEEALMSYKQAIALKSDYAEFYSNYGNVLEELKRYEEALLNYEQAIA 2502
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ FS AY G L L +++ A+ +G++P IE + + + Y EA+
Sbjct: 2503 LKPDFSDAYSNLGNTLQVLMRYRDALASYDKAIGLNPDCIEAYCGQGNALLELMRYEEAL 2562
Query: 640 I 640
+
Sbjct: 2563 V 2563
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 119/256 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +A G A +++ IL ++P + +AL T A + E E A++ F +A+
Sbjct: 33 LHSALAFHQNGALDEAEALYQAILLQNPEHFDALQLLATIAAQRNESEKAVALFDQALNI 92
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + RG A +L +A++ +A+ +P+ AD RG V + A+E
Sbjct: 93 NPDHSGSLNNRGNALRSLQRYEDALRSFERAVAVKPDYADAYINRGNVLMELLRCEDALE 152
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ L + AY G A+ ++ Y+ A ++ KAI L+ F +A+ + Q L
Sbjct: 153 SFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEKAIALNPCFADAYYNKGLALQKL 212
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ ALE +Q + + +++A+ +G + L +++ A+ + ++P ++E
Sbjct: 213 MRYDDALERYKQAIALKPDYTEAFLHQGNVFMALQRYENALLSYEHVIALNPDDVEAYTN 272
Query: 625 RASCYHAIGEYREAVI 640
R + Y +A++
Sbjct: 273 RGYALQELKRYGDALL 288
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
+L R + EG+ A +I +IL P + +AL T A + + E A++ F +A+
Sbjct: 2273 KLQRALKLHQEGRLDEAEAICQEILSSIPEHFDALQLSATIAAQRHDSEKALALFDQALA 2332
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P + RG A L EA+ + L +P+ A RG + + AV
Sbjct: 2333 IKPDHARSLNNRGIALQELKRYEEALASYERLLAVKPDYAMAYSNRGNTLQGLRRYEEAV 2392
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ L +N +AY+ G+A+ + Y A E+H KAI L ++ EA + Q+
Sbjct: 2393 SSYDQAIALRSDNANAYSNRGVAMMKLKRYADALESHDKAIALRPDYAEACSNRGNTLQE 2452
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L E+AL +Q + + +++ Y G +L L ++++A+ + + + P +
Sbjct: 2453 LKRYEEALMSYKQAIALKSDYAEFYSNYGNVLEELKRYEEALLNYEQAIALKPDFSDAYS 2512
Query: 624 LRASCYHAIGEYREAV 639
+ + YR+A+
Sbjct: 2513 NLGNTLQVLMRYRDAL 2528
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 6/245 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + +Y A+ F++ + P Y +A I RG E A+ F +AI
Sbjct: 102 NRGNALRSLQRYEDALRSFERAVAVKPDYADAYINRGNVLMELLRCEDALESFEKAIALK 161
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A A+ +A+ KA+ P AD + +G+ K ++ A+E
Sbjct: 162 PDYAPAYFNRGNAVMAMHRYEDALASYEKAIALNPCFADAYYNKGLALQKLMRYDDALER 221
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + A+ + G ++ Y+ A ++ I L+ + +EA+ + Q+L
Sbjct: 222 YKQAIALKPDYTEAFLHQGNVFMALQRYENALLSYEHVIALNPDDVEAYTNRGYALQELK 281
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP-----SNIE 620
AL +VL + + AY+ RG L +++ A+ + L + P S +
Sbjct: 282 RYGDALLSYDRVLALKCDDADAYNNRGNAFMALKRYEDALGSYNHVLALKPDYDFLSGL- 340
Query: 621 CLYLR 625
CLY R
Sbjct: 341 CLYTR 345
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 112/256 (43%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R +RG A +Y A+ +++ L+ P Y +A RG+ + E A++ + AI
Sbjct: 881 RNNRGNALRALQRYEEALDSYEKALQLKPDYVDAYTNRGSVLLELKRYEEALASYERAIA 940
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P E + AL EA+ + LE + + + RG V + K + A+
Sbjct: 941 IKPDHTEFYSDLAVVLLALKRYEEALATYERVLELRRDDPVVYNNRGNVLLELKRYEEAL 1000
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ L+ + AY+ LG+ + ++A ++ KAI L +F +A+ + + D
Sbjct: 1001 GSYEKAIALNPDYAEAYSNLGVTRKVLKRDEEALGSYEKAIALKPDFADAYYNRAVLFYD 1060
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L E+AL + + + F + + RG L L ++++A+ + + P + +
Sbjct: 1061 LDRYEEALASYDRAIVLKPDFVEVFSNRGNALLKLKRYEEALGSYEKAIALKPDFADAFF 1120
Query: 624 LRASCYHAIGEYREAV 639
+ + + Y +A+
Sbjct: 1121 NQGNALLELKRYEDAL 1136
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 4/244 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA +Y A++ ++++L P Y A RG R E A+S + +AI
Sbjct: 2343 NRGIALQELKRYEEALASYERLLAVKPDYAMAYSNRGNTLQGLRRYEEAVSSYDQAIALR 2402
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A+ RG A L +A++ KA+ P+ A+ RG + K + A+
Sbjct: 2403 SDNANAYSNRGVAMMKLKRYADALESHDKAIALRPDYAEACSNRGNTLQELKRYEEALMS 2462
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + Y+ G L + Y++A + +AI L +F +A+ +L Q L
Sbjct: 2463 YKQAIALKSDYAEFYSNYGNVLEELKRYEEALLNYEQAIALKPDFSDAYSNLGNTLQVLM 2522
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS----NIEC 621
AL + + ++ +AY +G L L ++++A+ L + P C
Sbjct: 2523 RYRDALASYDKAIGLNPDCIEAYCGQGNALLELMRYEEALVSYERALALKPEYDFLPGLC 2582
Query: 622 LYLR 625
LY R
Sbjct: 2583 LYTR 2586
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 396 KYASAISIFDQIL---KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
+Y A++ ++++L ++DP+ RG + E A+ + +AI NP EA+
Sbjct: 961 RYEEALATYERVLELRRDDPV---VYNNRGNVLLELKRYEEALGSYEKAIALNPDYAEAY 1017
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
G R L EA+ KA+ +P+ AD + R ++ + + A+ + L
Sbjct: 1018 SNLGVTRKVLKRDEEALGSYEKAIALKPDFADAYYNRAVLFYDLDRYEEALASYDRAIVL 1077
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQFYQDLA 565
+ ++ G AL + Y++A ++ KAI L +F +A+ + L ++ L
Sbjct: 1078 KPDFVEVFSNRGNALLKLKRYEEALGSYEKAIALKPDFADAFFNQGNALLELKRYEDALW 1137
Query: 566 NSEKALEC 573
+ EK L C
Sbjct: 1138 SYEKTLAC 1145
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 3/155 (1%)
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L F P D L + + D A+ + + ++ + G+AL + Y++
Sbjct: 1652 LSFSPEHFDALQLSATIAAQRHDSENALVLFDQALAIKPDHARSLNNRGIALQELKRYEE 1711
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A ++ +AI + +F+E + + Q+L E+AL C + + +++ Y+ +G L
Sbjct: 1712 ALASYERAIAVKPDFIEPYSNRGNTLQELKRYEEALACYDSAIALKPDYAEPYYNQGNAL 1771
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
L + + A++ L + P + +L C H
Sbjct: 1772 LELKRDEDAVRSYEKALALKP---DYDFLSGLCLH 1803
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 6/182 (3%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R +K +S+ +L R + EG+ A +++ +IL P + +AL T A + +
Sbjct: 1620 RSTKEESV----KLQRALKLHQEGRLDEAEALYREILSFSPEHFDALQLSATIAAQRHDS 1675
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ F +A+ P + RG A L EA+ +A+ +P+ + RG
Sbjct: 1676 ENALVLFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERAIAVKPDFIEPYSNRGN 1735
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRN 549
+ K + A+ + + L + Y G AL + + A ++ KA+ L D +
Sbjct: 1736 TLQELKRYEEALACYDSAIALKPDYAEPYYNQGNALLELKRDEDAVRSYEKALALKPDYD 1795
Query: 550 FL 551
FL
Sbjct: 1796 FL 1797
>gi|425459650|ref|ZP_18839136.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9808]
gi|389822559|emb|CCI29802.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9808]
Length = 736
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 123/245 (50%), Gaps = 1/245 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 376 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 435
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A LG++ EA++ + L P ++ + + + + ++AA + L + +
Sbjct: 436 RGEALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQ 495
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ ++ + W L ALE
Sbjct: 496 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 555
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + +FS+AY+ +G++L LG++ +A++ + + + + + + H +
Sbjct: 556 SKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLER 615
Query: 635 YREAV 639
++EA+
Sbjct: 616 FQEAI 620
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 117/246 (47%), Gaps = 3/246 (1%)
Query: 396 KYASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 410 RYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLGKNQEALESFERVLSLNPAASQAWQG 469
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 470 KADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 529
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N + G +L + + A E++ KA Q + F +A+ Q L + +ALE
Sbjct: 530 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAF 589
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY-LRASCYHAIG 633
Q + + +A+ +G LLH L + ++AI I E + +CY +G
Sbjct: 590 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYR-LG 648
Query: 634 EYREAV 639
+Y +A+
Sbjct: 649 DYSQAI 654
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 111/255 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ F+++L +P +A G+ ++ AA + +
Sbjct: 434 LGRGEALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTF 493
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 494 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALE 553
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
S + + + AY G+ L +G +A EA +A + + N+ +AW + L
Sbjct: 554 SYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQL 613
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ ++ I R S+ + G + LG + +AI + N E
Sbjct: 614 ERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKS 673
Query: 625 RASCYHAIGEYREAV 639
+ + +G+Y A+
Sbjct: 674 LGNSWFKLGQYERAI 688
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ +DQ L + +G + ++ A+ +++A Q NP +A+ +G
Sbjct: 514 YEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQG 573
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
LG + EA++ ++A + N +G + + + F A+ ++
Sbjct: 574 IILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRK 633
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ +G A +G+Y +A A+ +AIQ ++ E W L + L E+A++ Q+
Sbjct: 634 SEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQE 693
Query: 577 VL 578
L
Sbjct: 694 SL 695
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G L EAI KA +++ G
Sbjct: 585 ALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAC 644
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D++ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 645 YRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSN 700
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 8/193 (4%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ ++ + F T+ +K+
Sbjct: 545 LNKINNALESYSKAGQFNPQFSQAYYSQGII------LQKLGRNSEALEAF--TQATKAN 596
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI+
Sbjct: 597 SNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITA 656
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 657 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDQEVQTQKQLAETRWQ 716
Query: 498 DFNAAVEDLSACV 510
+ + ++ + V
Sbjct: 717 ELQQSPQNPTPKV 729
>gi|189022474|ref|YP_001932215.1| RNA-binding region RNP-1 (RNA recognition motif) [Brucella abortus
S19]
gi|189021048|gb|ACD73769.1| RNA-binding region RNP-1 (RNA recognition motif) [Brucella abortus
S19]
Length = 283
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 74 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 133
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 134 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 192
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 193 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 252
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 253 DKAKAANSYARAVQLDPKYKPA 274
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 34/204 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 54 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 149
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S + +
Sbjct: 150 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 199
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
+ + E R Y A+G+Y A
Sbjct: 200 NSTAPEPYNGRGISYVALGDYDNA 223
>gi|297618844|ref|YP_003706949.1| hypothetical protein Mvol_0316 [Methanococcus voltae A3]
gi|297377821|gb|ADI35976.1| TPR repeat-containing protein [Methanococcus voltae A3]
Length = 844
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 116/244 (47%), Gaps = 2/244 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY A+ ++I + P+ RG + ++ + AI+DFT AI + + + R
Sbjct: 24 KYVEALDKLNKIEEFQNKNPDFYTNRGIVYSELKQYDNAINDFTTAIMLKNNDPKLYFNR 83
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L + EA++D AL D+ RGI+ + K ++ A++D + + + K+
Sbjct: 84 GTLYKILKKYSEALKDYDMALSLNSKYTDVYLNRGIIYSELKKYDKAIDDFTTAISIRKD 143
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+KS Y+ GL + + Y A E A+ +D +A+ + Y +L A+E Q
Sbjct: 144 SKS-YSNRGLIYTKLKMYNNAMEDFNNALNIDYTNTDAYENRGCLYGELKKYNNAMEDFQ 202
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + + Y+L G L L ++ KA+ L+ L +D N++ L R + Y + EY
Sbjct: 203 KADELKNDSNTKYNL-GTLYKMLKKYDKALFYLNKALELDNKNVKALINRRNIYVELREY 261
Query: 636 REAV 639
+A+
Sbjct: 262 DKAL 265
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 3/255 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG KY+ A+ +D L + Y + + RG + ++ + AI DFT AI S
Sbjct: 81 FNRGTLYKILKKYSEALKDYDMALSLNSKYTDVYLNRGIIYSELKKYDKAIDDFTTAI-S 139
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+++ RG L A++D + AL + + D RG + + K +N A+E
Sbjct: 140 IRKDSKSYSNRGLIYTKLKMYNNAMEDFNNALNIDYTNTDAYENRGCLYGELKKYNNAME 199
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D +L ++ + Y LG + +Y KA KA++LD ++A + Y +L
Sbjct: 200 DFQKADELKNDSNTKYN-LGTLYKMLKKYDKALFYLNKALELDNKNVKALINRRNIYVEL 258
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+KAL+ ++ + SK+Y RG L ++ KA+KD + + +D +N +
Sbjct: 259 REYDKALKDNNYII-NIQNNSKSYFERGTLHKIFKKYDKALKDYNIAINLDNNNYDAYIN 317
Query: 625 RASCYHAIGEYREAV 639
R Y + +Y A+
Sbjct: 318 RGIVYSELKQYDNAM 332
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 110/249 (44%), Gaps = 2/249 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ Y +A+ F+ L D +A RG ++ A+ DF +A +
Sbjct: 149 NRGLIYTKLKMYNNAMEDFNNALNIDYTNTDAYENRGCLYGELKKYNNAMEDFQKADELK 208
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + G L + +A+ L+KALE + + L R + + ++++ A++D
Sbjct: 209 NDSNTKY-NLGTLYKMLKKYDKALFYLNKALELDNKNVKALINRRNIYVELREYDKALKD 267
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + + +KS + G +Y KA + + AI LD N +A+ + Y +L
Sbjct: 268 NNYIINIQNNSKSYFE-RGTLHKIFKKYDKALKDYNIAINLDNNNYDAYINRGIVYSELK 326
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A+E + I+ + Y+ R + L KAI+DL+ + +D +N E R
Sbjct: 327 QYDNAMEDFNNAIKINPKNPMGYNNRSFIYLTLNNKTKAIEDLNRAVALDKNNYEVYLNR 386
Query: 626 ASCYHAIGE 634
+ Y + +
Sbjct: 387 SIGYDKLDQ 395
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 1/193 (0%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
GT ++ + A+ +A++ + +A R L E +A++D + + + N
Sbjct: 218 GTLYKMLKKYDKALFYLNKALELDNKNVKALINRRNIYVELREYDKALKDNNYIINIQNN 277
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
S ERG ++ FK ++ A++D + + LD N AY G+ S + +Y A E
Sbjct: 278 SKSYF-ERGTLHKIFKKYDKALKDYNIAINLDNNNYDAYINRGIVYSELKQYDNAMEDFN 336
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
AI+++ + + + Y L N KA+E L + + +DK + Y R + L Q
Sbjct: 337 NAIKINPKNPMGYNNRSFIYLTLNNKTKAIEDLNRAVALDKNNYEVYLNRSIGYDKLDQI 396
Query: 602 KKAIKDLSSGLGI 614
+K+ +D + I
Sbjct: 397 EKSNQDYNESKNI 409
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 42/81 (51%)
Query: 49 LRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYIL 108
L+ + KAI + ++ + + NR Y++L+++ + + D + AL +D T AY
Sbjct: 124 LKKYDKAIDDFTTAISIRKDSKSYSNRGLIYTKLKMYNNAMEDFNNALNIDYTNTDAYEN 183
Query: 109 KGCAFSALGRKEEALSVWEKG 129
+GC + L + A+ ++K
Sbjct: 184 RGCLYGELKKYNNAMEDFQKA 204
>gi|428310178|ref|YP_007121155.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
gi|428251790|gb|AFZ17749.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
Length = 606
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 112/253 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A +Y AI+ +DQ+++ E R A + + +A+Q P
Sbjct: 326 RGKALYQLERYEDAIASYDQVIQFQTDDAEVWFERTQALYRLQSYSEVMMGLDKALQIRP 385
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG L EAI +KA+EF+P+ A + RG++ ++ + A
Sbjct: 386 DYAEAWVMRGVVLRNLQRDEEAIACYNKAIEFKPDYAVAWYNRGVLLASWQRYEEAFTAF 445
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L N A+ G AL ++ Y+ A + +AI + N+++AW +L
Sbjct: 446 DQVIQLQPNNAVAWYNRGAALGNLQRYEDAIVSCNQAIAFNPNYVQAWFQRGMALGELQR 505
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A+ +V+ + + +A+ RG L+ L +++ AI + +P + E R
Sbjct: 506 YEEAITAYDKVIQLQPDYGEAWFQRGFALYNLQRYEDAIASYDQAIEFNPLDAEAWGNRG 565
Query: 627 SCYHAIGEYREAV 639
+ Y EA+
Sbjct: 566 GVLLKLQRYEEAI 578
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 2/238 (0%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
Y+ + D+ L+ P Y EA + RG R QR+ E AI+ + +AI+ P AW R
Sbjct: 370 YSEVMMGLDKALQIRPDYAEAWVMRGVVLRNLQRD-EEAIACYNKAIEFKPDYAVAWYNR 428
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A+ EA + ++ +PN+A + RG + + A+ + + +
Sbjct: 429 GVLLASWQRYEEAFTAFDQVIQLQPNNAVAWYNRGAALGNLQRYEDAIVSCNQAIAFNPN 488
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+AL + Y++A A+ K IQL ++ EAW +L E A+
Sbjct: 489 YVQAWFQRGMALGELQRYEEAITAYDKVIQLQPDYGEAWFQRGFALYNLQRYEDAIASYD 548
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
Q + + ++A+ RG +L L ++++AI + I P+ +Y RA +G
Sbjct: 549 QAIEFNPLDAEAWGNRGGVLLKLQRYEEAIASFDKAIQIQPNFPMAIYNRAQALSQLG 606
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 3/230 (1%)
Query: 373 ISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ K+ I D+ + RG+ N + AI+ +++ ++ P Y A RG A +
Sbjct: 377 LDKALQIRPDYAEAWVMRGVVLRNLQRDEEAIACYNKAIEFKPDYAVAWYNRGVLLASWQ 436
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E A + F + IQ P+ AW RG A L +AI ++A+ F PN +R
Sbjct: 437 RYEEAFTAFDQVIQLQPNNAVAWYNRGAALGNLQRYEDAIVSCNQAIAFNPNYVQAWFQR 496
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ + + + A+ ++L + A+ G AL ++ Y+ A ++ +AI+ +
Sbjct: 497 GMALGELQRYEEAITAYDKVIQLQPDYGEAWFQRGFALYNLQRYEDAIASYDQAIEFNPL 556
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
EAWG+ L E+A+ + + I F A + R L LG
Sbjct: 557 DAEAWGNRGGVLLKLQRYEEAIASFDKAIQIQPNFPMAIYNRAQALSQLG 606
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 107/244 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y+ AI+ ++ + P + +A RG A E AI+ + + IQ E W R
Sbjct: 301 RYSEAIAYYEDAILIQPNFYQAWYERGKALYQLERYEDAIASYDQVIQFQTDDAEVWFER 360
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
QA L E + L KAL+ P+ A+ RG+V + A+ + ++ +
Sbjct: 361 TQALYRLQSYSEVMMGLDKALQIRPDYAEAWVMRGVVLRNLQRDEEAIACYNKAIEFKPD 420
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L+S Y++A A + IQL N AW + +L E A+
Sbjct: 421 YAVAWYNRGVLLASWQRYEEAFTAFDQVIQLQPNNAVAWYNRGAALGNLQRYEDAIVSCN 480
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
Q + + + +A+ RG+ L L ++++AI + + P E + R + + Y
Sbjct: 481 QAIAFNPNYVQAWFQRGMALGELQRYEEAITAYDKVIQLQPDYGEAWFQRGFALYNLQRY 540
Query: 636 REAV 639
+A+
Sbjct: 541 EDAI 544
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
NR L+ ++ I C++A+ +P +QA+ +G A L R EEA++ ++K
Sbjct: 461 NRGAALGNLQRYEDAIVSCNQAIAFNPNYVQAWFQRGMALGELQRYEEAITAYDK 515
>gi|73667569|ref|YP_303584.1| hypothetical protein Mbar_A0011 [Methanosarcina barkeri str.
Fusaro]
gi|72394731|gb|AAZ69004.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 1138
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 115/242 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L +G+A N +Y AIS + ++L +P EAL R A + + A++D+
Sbjct: 755 DALLGKGLALSNLSRYDEAISCYTKLLNSEPENLEALRSRAFALSKSNKSNDALADYDRI 814
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ P + + ALG E + LE PN+ +I++++G DF
Sbjct: 815 IKLQPENSQILAEKASLLEALGRYEETAACYERMLEISPNNREIIYKQGKALENSGDFEG 874
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
AV ++LD N AY G L + +Y++A + + KA++ + + AW Y
Sbjct: 875 AVGCYDRILELDPGNVGAYNNKGFVLYKLEKYQQAIDCYDKALEYSPDNVTAWYFQGCTY 934
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
L++++ AL C + + + A++ +G + + +G+ ++A+ + L I P++
Sbjct: 935 LTLSSNKAALNCFNKTVQLKPDCITAWYNKGYIHNMMGETEEAVSCYDNVLAISPNSPSA 994
Query: 622 LY 623
LY
Sbjct: 995 LY 996
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G + GK A++ +++ L P+ PE +G AI+ + ++ +N
Sbjct: 110 KGCSLAELGKNDQAVNCYEKALSTFPVSPENWYNKGNKHLELNNYVEAINFYDKSFAANT 169
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
W R+ A LG E++ K++E NS+ L +G+ + + A+E L
Sbjct: 170 YLSTVWYRKALASEQLGLDQESLNSYDKSIELNSNSSSSLQMQGMAYLGLEKYPEAIEYL 229
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + + +N G+ L G+Y+ A + + KAI + + + AW + + +
Sbjct: 230 DSALNITPDNAELLYQKGVVLDKSGDYETAIDCYDKAISFNPDLVNAWHNKGVNLEKMGI 289
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++AL C + VL + +G+ L LG++ +A++ L DP + E Y +
Sbjct: 290 YDEALTCYEFVLLSEPENLDVLQRKGVCLEKLGRNDEALQCYDEVLVYDPGSSEAWYSKG 349
Query: 627 SCYHAIGEYREAV 639
S + G+Y A+
Sbjct: 350 SLLNKTGQYDAAI 362
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 4/233 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE--AIQ 443
S+G G+Y +AI+ +D+ L D IG + EAA+ + E +
Sbjct: 347 SKGSLLNKTGQYDAAIACYDKALNPDTGVQVEEIGSDSLEQLNV-YEAALPSYPENPEFK 405
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
S+P+ + W + A L + AI+ K LE E A + + +G+ + + A+
Sbjct: 406 SSPTV-KIWYEKALAFDKLEKYESAIECYDKVLETESGHAVVWYLKGLDLERLGRYEEAI 464
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
E +KLD + GL S I +YK A E++ KA+++D N+ W
Sbjct: 465 ECYGRALKLDSGYAKVWYRKGLDSSKIKDYKDAVESYDKALEIDENYTLTWAGKAFALAK 524
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
L E +L C +VL + A++ +GL+L LG+H +A + + L IDP
Sbjct: 525 LGEYESSLTCYNKVLGAVPSSAVAWYNKGLVLDELGKHAEASECYNQTLLIDP 577
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 118/249 (47%), Gaps = 8/249 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK A+S +DQ+L + +AL+G+G A + + AIS +T+ + S P EA +
Sbjct: 734 GKLEEAVSYYDQLLTLNSSNSDALLGKGLALSNLSRYDEAISCYTKLLNSEPENLEALRS 793
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC----V 510
R A + +S +A+ D + ++ +P ++ IL E+ + + E+ +AC +
Sbjct: 794 RAFALSKSNKSNDALADYDRIIKLQPENSQILAEKASLLEALGRY----EETAACYERML 849
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
++ N+ G AL + G+++ A + + ++LD + A+ + L ++A
Sbjct: 850 EISPNNREIIYKQGKALENSGDFEGAVGCYDRILELDPGNVGAYNNKGFVLYKLEKYQQA 909
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
++C + L A++ +G L +K A+ + + + P I Y + ++
Sbjct: 910 IDCYDKALEYSPDNVTAWYFQGCTYLTLSSNKAALNCFNKTVQLKPDCITAWYNKGYIHN 969
Query: 631 AIGEYREAV 639
+GE EAV
Sbjct: 970 MMGETEEAV 978
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 112/287 (39%), Gaps = 34/287 (11%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A + KY AI D L P E L +G + E AI + +AI NP
Sbjct: 212 QGMAYLGLEKYPEAIEYLDSALNITPDNAELLYQKGVVLDKSGDYETAIDCYDKAISFNP 271
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +G +G EA+ L EP + D+L +G+ K + A++
Sbjct: 272 DLVNAWHNKGVNLEKMGIYDEALTCYEFVLLSEPENLDVLQRKGVCLEKLGRNDEALQCY 331
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR---------------NFL 551
+ D + A+ G L+ G+Y A + KA+ D N
Sbjct: 332 DEVLVYDPGSSEAWYSKGSLLNKTGQYDAAIACYDKALNPDTGVQVEEIGSDSLEQLNVY 391
Query: 552 EA-------------------WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
EA W + L E A+EC +VL + + ++L+G
Sbjct: 392 EAALPSYPENPEFKSSPTVKIWYEKALAFDKLEKYESAIECYDKVLETESGHAVVWYLKG 451
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L L LG++++AI+ L +D + Y + I +Y++AV
Sbjct: 452 LDLERLGRYEEAIECYGRALKLDSGYAKVWYRKGLDSSKIKDYKDAV 498
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 104/240 (43%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ + + L DP AL G + +LE A+S + + + N S +A +G A
Sbjct: 705 ALECYRKALDLDPQSSTALYGIASTTGDLGKLEEAVSYYDQLLTLNSSNSDALLGKGLAL 764
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ L EAI +K L EP + + L R K N A+ D +KL EN
Sbjct: 765 SNLSRYDEAISCYTKLLNSEPENLEALRSRAFALSKSNKSNDALADYDRIIKLQPENSQI 824
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
L ++G Y++ + + +++ N E + ++ + E A+ C ++L
Sbjct: 825 LAEKASLLEALGRYEETAACYERMLEISPNNREIIYKQGKALENSGDFEGAVGCYDRILE 884
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+D AY+ +G +L+ L ++++AI L P N+ Y + Y + + A+
Sbjct: 885 LDPGNVGAYNNKGFVLYKLEKYQQAIDCYDKALEYSPDNVTAWYFQGCTYLTLSSNKAAL 944
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 150/343 (43%), Gaps = 28/343 (8%)
Query: 316 ASLNDSNTNSESYSKSSISDNKSSDSTES----RSKLSFKWDMLKETSNEAKRNKKF--- 368
++LN + N+E + + +KS D + +SF D++ N+ +K
Sbjct: 231 SALNITPDNAELLYQKGVVLDKSGDYETAIDCYDKAISFNPDLVNAWHNKGVNLEKMGIY 290
Query: 369 -----CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
C + S+ ++D +G+ G+ A+ +D++L DP EA +G+
Sbjct: 291 DEALTCYEFVLLSEPENLDVLQRKGVCLEKLGRNDEALQCYDEVLVYDPGSSEAWYSKGS 350
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
+ +AAI+ + +A+ NP G + G +S+E + AL P +
Sbjct: 351 LLNKTGQYDAAIACYDKAL--NPDTGVQVEEIGS------DSLEQLNVYEAALPSYPENP 402
Query: 484 D--------ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ I +E+ + K + + +A+E ++ + + + GL L +G Y++
Sbjct: 403 EFKSSPTVKIWYEKALAFDKLEKYESAIECYDKVLETESGHAVVWYLKGLDLERLGRYEE 462
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A E + +A++LD + + W + + + A+E + L ID+ ++ + + L
Sbjct: 463 AIECYGRALKLDSGYAKVWYRKGLDSSKIKDYKDAVESYDKALEIDENYTLTWAGKAFAL 522
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
LG+++ ++ + LG PS+ Y + +G++ EA
Sbjct: 523 AKLGEYESSLTCYNKVLGAVPSSAVAWYNKGLVLDELGKHAEA 565
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 93/233 (39%)
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
+ D Y A G+ + + A++ + + NP+ EAW +G L S
Sbjct: 644 LFSPDISYDAAWYGKASIYGKLGMYDDALNSYDMVLAINPARAEAWYEKGSILDRLDRSE 703
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EA++ KAL+ +P S+ L+ AV + L+ N A GLA
Sbjct: 704 EALECYRKALDLDPQSSTALYGIASTTGDLGKLEEAVSYYDQLLTLNSSNSDALLGKGLA 763
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
LS++ Y +A + K + + LEA S AL +++ + S+
Sbjct: 764 LSNLSRYDEAISCYTKLLNSEPENLEALRSRAFALSKSNKSNDALADYDRIIKLQPENSQ 823
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ LL LG++++ L I P+N E +Y + G++ AV
Sbjct: 824 ILAEKASLLEALGRYEETAACYERMLEISPNNREIIYKQGKALENSGDFEGAV 876
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 122/309 (39%), Gaps = 38/309 (12%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C ++ +++S +G+ G+Y AI + + LK D Y + +G +
Sbjct: 432 CYDKVLETESGHAVVWYLKGLDLERLGRYEEAIECYGRALKLDSGYAKVWYRKGLDSSKI 491
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + A+ + +A++ + + W + A A LGE ++ +K L P+SA +
Sbjct: 492 KDYKDAVESYDKALEIDENYTLTWAGKAFALAKLGEYESSLTCYNKVLGAVPSSAVAWYN 551
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS------IGEYKKAEEAHLK 542
+G+V + A E + + +D E +A L + I E+ K A
Sbjct: 552 KGLVLDELGKHAEASECYNQTLLIDPEYSAARFKLNKNMKQDSTEALISEHVKNNSADAN 611
Query: 543 AIQL--------------------------------DRNFLEAWGHLTQFYQDLANSEKA 570
Q+ D ++ AW Y L + A
Sbjct: 612 PAQMLSGGFWAYLLNYEYASSEDRDEPSEDLNLFSPDISYDAAWYGKASIYGKLGMYDDA 671
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
L VL I+ ++A++ +G +L L + ++A++ L +DP + LY AS
Sbjct: 672 LNSYDMVLAINPARAEAWYEKGSILDRLDRSEEALECYRKALDLDPQSSTALYGIASTTG 731
Query: 631 AIGEYREAV 639
+G+ EAV
Sbjct: 732 DLGKLEEAV 740
>gi|70607745|ref|YP_256615.1| hypothetical protein Saci_2026 [Sulfolobus acidocaldarius DSM 639]
gi|68568393|gb|AAY81322.1| conserved TPR domain protein [Sulfolobus acidocaldarius DSM 639]
Length = 399
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 133/270 (49%), Gaps = 15/270 (5%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE----------ALIGRGTARAFQREL- 431
+ +RG+A N Y+ AI FD+ ++ +P + + AL G+ A +L
Sbjct: 26 YHFNRGLAYFNLNNYSEAIREFDEAIRLNPFHADSHYYKALSLIALQRSGSVNAGISDLY 85
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI +F EAI+ +P E ++G A LG EA+ + A++ P + + + + I
Sbjct: 86 ERAILEFDEAIKIDPKNPEYHYQKGLALEILGRQYEALLEYQDAIKLNPRNPEYYYRKAI 145
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + + A+ ++ ++L+ +N + Y L L S+G+ K+A + KAI L+
Sbjct: 146 ILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVA 205
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR-GLLLHGLGQHKKAIKDLSS 610
E + ++L + L+ + + + YH R G+L + LG+++KA+ +L
Sbjct: 206 EYYHQKGLILKELKRYDDVLKDYDNAIKLSPN-NPEYHFRKGVLYYELGKYEKAVMELEE 264
Query: 611 GLGIDPSNIECLY-LRASCYHAIGEYREAV 639
+ ++P+N E Y L + +H + Y +AV
Sbjct: 265 SVRLNPNNPEYHYQLGLALFHVMM-YEDAV 293
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 122/259 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ +G+A G+ A+ + +K +P PE + Q + AI++ A
Sbjct: 104 EYHYQKGLALEILGRQYEALLEYQDAIKLNPRNPEYYYRKAIILQDQEKYVDAIAEVDTA 163
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP + R+ ++G+ EA+ L KA+ P A+ H++G++ + K ++
Sbjct: 164 IRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVAEYYHQKGLILKELKRYDD 223
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
++D +KL N + G+ +G+Y+KA ++++L+ N E L
Sbjct: 224 VLKDYDNAIKLSPNNPEYHFRKGVLYYELGKYEKAVMELEESVRLNPNNPEYHYQLGLAL 283
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ E A+E + + +D + + Y+ +G L L ++ KAIK+ + ++P++
Sbjct: 284 FHVMMYEDAVEEFDKAVKLDPQNPQYYYYKGNALKALWKYDKAIKEYDKAISLNPNDPLP 343
Query: 622 LYLRASCYHAIGEYREAVI 640
Y + +G+Y EA++
Sbjct: 344 HYQKGVVLKTLGKYEEAIV 362
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 118/242 (48%), Gaps = 10/242 (4%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAIS 436
++ + I ++ KY AI+ D ++ +P + +AL+ + + L+ A+
Sbjct: 138 EYYYRKAIILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKALLLKSMGK-----LKEALD 192
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+AI NP E + ++G L + ++D A++ PN+ + +G++ ++
Sbjct: 193 QLDKAISLNPQVAEYYHQKGLILKELKRYDDVLKDYDNAIKLSPNNPEYHFRKGVLYYEL 252
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ AV +L V+L+ N + LGLAL + Y+ A E KA++LD + + +
Sbjct: 253 GKYEKAVMELEESVRLNPNNPEYHYQLGLALFHVMMYEDAVEEFDKAVKLDPQNPQYYYY 312
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ L +KA++ + + ++ ++ +G++L LG++++AI +L + ++P
Sbjct: 313 KGNALKALWKYDKAIKEYDKAISLNPNDPLPHYQKGVVLKTLGKYEEAIVELDEAIKLNP 372
Query: 617 SN 618
N
Sbjct: 373 DN 374
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 67/137 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ +G+ GKY A+ ++ ++ +P PE G A E A+ +F +A
Sbjct: 240 EYHFRKGVLYYELGKYEKAVMELEESVRLNPNNPEYHYQLGLALFHVMMYEDAVEEFDKA 299
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P + + +G A AL + +AI++ KA+ PN +++G+V +
Sbjct: 300 VKLDPQNPQYYYYKGNALKALWKYDKAIKEYDKAISLNPNDPLPHYQKGVVLKTLGKYEE 359
Query: 502 AVEDLSACVKLDKENKS 518
A+ +L +KL+ +N+
Sbjct: 360 AIVELDEAIKLNPDNQQ 376
>gi|158334750|ref|YP_001515922.1| TPR repeat-containing serine/threonine protein kinase
[Acaryochloris marina MBIC11017]
gi|158304991|gb|ABW26608.1| serine/threonine protein kinase with TPR repeats [Acaryochloris
marina MBIC11017]
Length = 654
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 127/259 (49%), Gaps = 19/259 (7%)
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
N V+ +S+S+++ L G + G Y AI+ +D+ + D +A RG A
Sbjct: 347 NNTVSVSPMSRSEAL-----LRSGYEKYRAGDYQGAIADYDESIDLDDQNADAFNERGLA 401
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ + +AA++D+ +A++ + A+ RG + AL + A++D ++A+ A
Sbjct: 402 QYGLQNYQAALADYDQALKLDDQHSNAFGNRGLTKHALQDYKGAVEDYNQAIRLNSQYAY 461
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ H RG+ + KD A+ D +++D + + G +G+Y+ A +AI
Sbjct: 462 VYHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGQYRTALTDFDEAI 521
Query: 545 QLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+LD +A+ G L + +LA+ ++ALE +D + AY+ RGL +
Sbjct: 522 RLDGKNAKAYNGRAHAKGKLGDWKGELADFDQALE-------LDDQLVDAYNSRGLAKYN 574
Query: 598 LGQHKKAIKDLSSGLGIDP 616
+++AI+D ++ + ++P
Sbjct: 575 RKNYREAIQDYNTAIRLEP 593
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+AQ Y +A++ +DQ LK D + A RG + ++ + A+ D+ +AI+ N
Sbjct: 398 RGLAQYGLQNYQAALADYDQALKLDDQHSNAFGNRGLTKHALQDYKGAVEDYNQAIRLNS 457
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG ++ L + A+ D +AL +P D L RG +++ + A+ D
Sbjct: 458 QYAYVYHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGQYRTALTDF 517
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++LD +N AY A +G++K +A++LD ++A+ + N
Sbjct: 518 DEAIRLDGKNAKAYNGRAHAKGKLGDWKGELADFDQALELDDQLVDAYNSRGLAKYNRKN 577
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A++ + ++ ++ AY RG +
Sbjct: 578 YREAIQDYNTAIRLEPDYAVAYFNRGFV 605
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 441 AIQSN------P-SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AIQ+N P S EA R G + G+ AI D ++++ + +AD +ERG+
Sbjct: 343 AIQANNTVSVSPMSRSEALLRSGYEKYRAGDYQGAIADYDESIDLDDQNADAFNERGLAQ 402
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ +++ AA+ D +KLD ++ +A+ GL ++ +YK A E + +AI+L+ +
Sbjct: 403 YGLQNYQAALADYDQALKLDDQHSNAFGNRGLTKHALQDYKGAVEDYNQAIRLNSQYAYV 462
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ + +L + + AL Q L ID + RG + + LGQ++ A+ D +
Sbjct: 463 YHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGQYRTALTDFDEAIR 522
Query: 614 IDPSNIECLYLRASCYHAIGEYR 636
+D N + RA +G+++
Sbjct: 523 LDGKNAKAYNGRAHAKGKLGDWK 545
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 103/224 (45%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EAL+ G + + + AI+D+ E+I + +A+ RG A+ L A+ D +A
Sbjct: 359 EALLRSGYEKYRAGDYQGAIADYDESIDLDDQNADAFNERGLAQYGLQNYQAALADYDQA 418
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L+ + ++ RG+ +D+ AVED + ++L+ + Y G++ ++ + +
Sbjct: 419 LKLDDQHSNAFGNRGLTKHALQDYKGAVEDYNQAIRLNSQYAYVYHNRGVSKYNLKDLQG 478
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + +A+++D + + + + DL AL + + +D + +KAY+ R
Sbjct: 479 ALSDYDQALRIDPKREDTLRNRGRIHYDLGQYRTALTDFDEAIRLDGKNAKAYNGRAHAK 538
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG K + D L +D ++ R + YREA+
Sbjct: 539 GKLGDWKGELADFDQALELDDQLVDAYNSRGLAKYNRKNYREAI 582
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+++ N A+S +DQ L+ DP + L RG + A++DF EAI+ +
Sbjct: 465 NRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGQYRTALTDFDEAIRLD 524
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ R A+ LG+ + D +ALE + D + RG+ + K++ A++D
Sbjct: 525 GKNAKAYNGRAHAKGKLGDWKGELADFDQALELDDQLVDAYNSRGLAKYNRKNYREAIQD 584
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ ++L+ + AY G + + A+ KA L +N
Sbjct: 585 YNTAIRLEPDYAVAYFNRGFVKEVQNDVEGAKADFQKAADLYQN 628
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 84/169 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + Y A+ ++Q ++ + Y RG ++ ++L+ A+SD+ +A++ +
Sbjct: 431 NRGLTKHALQDYKGAVEDYNQAIRLNSQYAYVYHNRGVSKYNLKDLQGALSDYDQALRID 490
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + + RG+ LG+ A+ D +A+ + +A + R K D+ + D
Sbjct: 491 PKREDTLRNRGRIHYDLGQYRTALTDFDEAIRLDGKNAKAYNGRAHAKGKLGDWKGELAD 550
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
++LD + AY GLA + Y++A + + AI+L+ ++ A+
Sbjct: 551 FDQALELDDQLVDAYNSRGLAKYNRKNYREAIQDYNTAIRLEPDYAVAY 599
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD SRG+A+ N Y AI ++ ++ +P Y A RG + Q ++E A +DF +
Sbjct: 562 VDAYNSRGLAKYNRKNYREAIQDYNTAIRLEPDYAVAYFNRGFVKEVQNDVEGAKADFQK 621
Query: 441 A 441
A
Sbjct: 622 A 622
>gi|261220776|ref|ZP_05935057.1| TPR repeat-containing protein [Brucella ceti B1/94]
gi|261312977|ref|ZP_05952174.1| TPR repeat-containing protein [Brucella pinnipedialis M163/99/10]
gi|261318373|ref|ZP_05957570.1| TPR repeat-containing protein [Brucella pinnipedialis B2/94]
gi|261757156|ref|ZP_06000865.1| RNA-binding region RNP-1 [Brucella sp. F5/99]
gi|265986173|ref|ZP_06098730.1| TPR repeat-containing protein [Brucella pinnipedialis M292/94/1]
gi|265995868|ref|ZP_06108425.1| TPR repeat-containing protein [Brucella ceti M490/95/1]
gi|340792731|ref|YP_004758195.1| TPR repeat domain-containing protein [Brucella pinnipedialis B2/94]
gi|260919360|gb|EEX86013.1| TPR repeat-containing protein [Brucella ceti B1/94]
gi|261297596|gb|EEY01093.1| TPR repeat-containing protein [Brucella pinnipedialis B2/94]
gi|261302003|gb|EEY05500.1| TPR repeat-containing protein [Brucella pinnipedialis M163/99/10]
gi|261737140|gb|EEY25136.1| RNA-binding region RNP-1 [Brucella sp. F5/99]
gi|262550165|gb|EEZ06326.1| TPR repeat-containing protein [Brucella ceti M490/95/1]
gi|264658370|gb|EEZ28631.1| TPR repeat-containing protein [Brucella pinnipedialis M292/94/1]
gi|340561190|gb|AEK56427.1| TPR repeat domain-containing protein [Brucella pinnipedialis B2/94]
Length = 295
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 86 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 145
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 146 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 204
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 264
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 265 DKAKAANSYARTVQLDPKYKPA 286
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 34/204 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 161
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S + +
Sbjct: 162 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 211
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
+ + E R Y A+G+Y A
Sbjct: 212 NSTAPEPYNGRGISYVALGDYDNA 235
>gi|443311594|ref|ZP_21041220.1| tetratricopeptide repeat protein [Synechocystis sp. PCC 7509]
gi|442778323|gb|ELR88590.1| tetratricopeptide repeat protein [Synechocystis sp. PCC 7509]
Length = 983
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R +A + +Y +AI+ FD L+ +P+ P++ RG + + E AI F + +++
Sbjct: 728 RSMAFWHLKQYENAIASFDNELELNPINPDSWYYRGLSCKELKRYENAIFSFDKVVETQT 787
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG + + EAI A++F PN ++G+ K + A E
Sbjct: 788 DNYQAWFHRGIVLGRMKKYEEAIASYDNAIKFSPNYHQAWVDKGVALGKLQRHQEAFEAF 847
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
V++ E+ A+ G+AL I Y+ A + K I+L+ N +AW L
Sbjct: 848 DRAVQIQSEDAVAWLNRGMALEVIERYEDAIASFDKTIELNPNSYKAWNSKGYLLVQLER 907
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
E+AL Q L I+ ++ Y+ + L GQ K AI++L + I+P
Sbjct: 908 DEEALASFDQALTIEPTYAPPYYNKALSYALQGQPKLAIENLQKAIDINP 957
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
PE I G + AI+ F A+ E W R A L + AI
Sbjct: 688 PEDYINEGKVQLATENYPDAIALFDLALAIKRDRPEVWHDRSMAFWHLKQYENAIASFDN 747
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
LE P + D + RG+ + K + A+ V+ +N A+ + G+ L + +Y+
Sbjct: 748 ELELNPINPDSWYYRGLSCKELKRYENAIFSFDKVVETQTDNYQAWFHRGIVLGRMKKYE 807
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A ++ AI+ N+ +AW L ++A E + + I + A+ RG+
Sbjct: 808 EAIASYDNAIKFSPNYHQAWVDKGVALGKLQRHQEAFEAFDRAVQIQSEDAVAWLNRGMA 867
Query: 595 LHGLGQHKKAIKDLSSGLGIDPS 617
L + +++ AI + ++P+
Sbjct: 868 LEVIERYEDAIASFDKTIELNPN 890
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 2/194 (1%)
Query: 361 EAKR--NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
E KR N F ++ ++++ + RGI KY AI+ +D +K P Y +A
Sbjct: 768 ELKRYENAIFSFDKVVETQTDNYQAWFHRGIVLGRMKKYEEAIASYDNAIKFSPNYHQAW 827
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
+ +G A + + A F A+Q AW RG A + +AI K +E
Sbjct: 828 VDKGVALGKLQRHQEAFEAFDRAVQIQSEDAVAWLNRGMALEVIERYEDAIASFDKTIEL 887
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
PNS + +G + + + A+ + ++ Y L+ + G+ K A E
Sbjct: 888 NPNSYKAWNSKGYLLVQLERDEEALASFDQALTIEPTYAPPYYNKALSYALQGQPKLAIE 947
Query: 539 AHLKAIQLDRNFLE 552
KAI ++ + E
Sbjct: 948 NLQKAIDINPRYKE 961
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/226 (18%), Positives = 89/226 (39%), Gaps = 20/226 (8%)
Query: 431 LEAAISDFTEAIQS-----------------NPSAGEAWKRRGQARAALGESVEAIQDLS 473
+E A ++ T+ IQ NP E + G+ + A +AI
Sbjct: 656 VEVAFTEITQTIQPLSAEIEKLKSNHPQLFVNP---EDYINEGKVQLATENYPDAIALFD 712
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
AL + + ++ H+R + + K + A+ ++L+ N ++ Y GL+ + Y
Sbjct: 713 LALAIKRDRPEVWHDRSMAFWHLKQYENAIASFDNELELNPINPDSWYYRGLSCKELKRY 772
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ A + K ++ + +AW H + E+A+ + + +A+ +G+
Sbjct: 773 ENAIFSFDKVVETQTDNYQAWFHRGIVLGRMKKYEEAIASYDNAIKFSPNYHQAWVDKGV 832
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L L +H++A + + I + R I Y +A+
Sbjct: 833 ALGKLQRHQEAFEAFDRAVQIQSEDAVAWLNRGMALEVIERYEDAI 878
>gi|425442756|ref|ZP_18822993.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9717]
gi|389716117|emb|CCH99609.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9717]
Length = 492
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 364 RNKKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
R +K+ + +K+I ++ F + RGI N+ KY A++ + + ++ D Y A
Sbjct: 317 RQQKYDLALADLNKAIELNSNFSHFYVVRGILHENKEKYELALADYSKAIELDSNYANAY 376
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
RG Q++ + A++D+++AI+ NP+ A+ RG + L + A+ D SKA++
Sbjct: 377 YNRGELYRLQKKYDLALADYSKAIEINPNYAYAYYNRGNLYSDLQKYELALADYSKAIDI 436
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
PN AD + RG+V + + ++ A+ D + ++++ AY GL ++ +Y
Sbjct: 437 NPNYADAYNNRGVVYYNLQKYDLALADYNQAIRINPNYAQAYYNRGLLYYNLQKY 491
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 129/257 (50%), Gaps = 5/257 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + KY A+S F++ + + + +A RG Q++ E A++D+ +AI N
Sbjct: 207 NRGNLYSYQQKYDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDIN 266
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL---HERGIVNFKFKDFNAA 502
P+ A+ RG + L + A+ D +KA++ NS D+ RGI + + ++ A
Sbjct: 267 PNDAGAYASRGNLYSDLQKYELALADYNKAIDI--NSDDVFSAYFYRGIFYHRQQKYDLA 324
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ DL+ ++L+ Y G+ + +Y+ A + KAI+LD N+ A+ + + Y+
Sbjct: 325 LADLNKAIELNSNFSHFYVVRGILHENKEKYELALADYSKAIELDSNYANAYYNRGELYR 384
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+ AL + + I+ ++ AY+ RG L L +++ A+ D S + I+P+ +
Sbjct: 385 LQKKYDLALADYSKAIEINPNYAYAYYNRGNLYSDLQKYELALADYSKAIDINPNYADAY 444
Query: 623 YLRASCYHAIGEYREAV 639
R Y+ + +Y A+
Sbjct: 445 NNRGVVYYNLQKYDLAL 461
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ + + KY A++ F++ + +P A RG ++Q++ + A+SDF +AI N
Sbjct: 174 RGLNYLLQQKYDLALADFNKAIDINPNDAGAYNNRGNLYSYQQKYDLALSDFNKAIDLNR 233
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A++ RG + A+ D +KA++ PN A RG + + + A+ D
Sbjct: 234 NFAKAYENRGNLYRRQQKYELALADYNKAIDINPNDAGAYASRGNLYSDLQKYELALADY 293
Query: 507 SACVKLDKENK-SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ ++ SAY Y G+ +Y A KAI+L+ NF + +++
Sbjct: 294 NKAIDINSDDVFSAYFYRGIFYHRQQKYDLALADLNKAIELNSNFSHFYVVRGILHENKE 353
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E AL + + +D ++ AY+ RG L ++ A+ D S + I+P+ Y R
Sbjct: 354 KYELALADYSKAIELDSNYANAYYNRGELYRLQKKYDLALADYSKAIEINPNYAYAYYNR 413
Query: 626 ASCYHAIGEYREAV 639
+ Y + +Y A+
Sbjct: 414 GNLYSDLQKYELAL 427
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 122/261 (46%), Gaps = 8/261 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R + ++ KY A+ +++ ++ +P Y GRG Q++ + A++DF +AI NP
Sbjct: 140 RALHYSSQQKYDLALDDYNKAIELNPNYGLYYRGRGLNYLLQQKYDLALADFNKAIDINP 199
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG + + A+ D +KA++ N A RG + + + + A+ D
Sbjct: 200 NDAGAYNNRGNLYSYQQKYDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADY 259
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR-NFLEAWGHLTQFYQDLA 565
+ + ++ + AY G S + +Y+ A + KAI ++ + A+ + FY
Sbjct: 260 NKAIDINPNDAGAYASRGNLYSDLQKYELALADYNKAIDINSDDVFSAYFYRGIFYHRQQ 319
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ AL L + + ++ FS Y +RG+L +++ A+ D S + +D + Y R
Sbjct: 320 KYDLALADLNKAIELNSNFSHFYVVRGILHENKEKYELALADYSKAIELDSNYANAYYNR 379
Query: 626 ASCYH-------AIGEYREAV 639
Y A+ +Y +A+
Sbjct: 380 GELYRLQKKYDLALADYSKAI 400
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 3/219 (1%)
Query: 415 PEAL--IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
P AL + R Q++ E A+ D +AI+ NP+ A+ R ++ + A+ D
Sbjct: 98 PRALWYVIRAKYYFLQQKYELALDDHNKAIELNPNYAMAYSVRALHYSSQQKYDLALDDY 157
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+KA+E PN RG+ + ++ A+ D + + ++ + AY G S +
Sbjct: 158 NKAIELNPNYGLYYRGRGLNYLLQQKYDLALADFNKAIDINPNDAGAYNNRGNLYSYQQK 217
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y A KAI L+RNF +A+ + Y+ E AL + + I+ + AY RG
Sbjct: 218 YDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDINPNDAGAYASRG 277
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYH 630
L L +++ A+ D + + I+ ++ Y R YH
Sbjct: 278 NLYSDLQKYELALADYNKAIDINSDDVFSAYFYRGIFYH 316
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 105/244 (43%), Gaps = 3/244 (1%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+++ +Q + P P++ I + + + ++ +AI P A W
Sbjct: 49 YEQALTVINQAISLFPNSPKSYIMKESVLDSLERYDEGLAAINQAIDLAPRA--LWYVIR 106
Query: 457 QARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
L + E A+ D +KA+E PN A R + + ++ A++D + ++L+
Sbjct: 107 AKYYFLQQKYELALDDHNKAIELNPNYAMAYSVRALHYSSQQKYDLALDDYNKAIELNPN 166
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
Y GL +Y A KAI ++ N A+ + Y + AL
Sbjct: 167 YGLYYRGRGLNYLLQQKYDLALADFNKAIDINPNDAGAYNNRGNLYSYQQKYDLALSDFN 226
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + +++ F+KAY RG L +++ A+ D + + I+P++ R + Y + +Y
Sbjct: 227 KAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDINPNDAGAYASRGNLYSDLQKY 286
Query: 636 REAV 639
A+
Sbjct: 287 ELAL 290
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 15 KTHKTICEIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLLAQSYEI 69
K + + + + +DS A+A R EL +L +L ++SKAI I + A +Y
Sbjct: 354 KYELALADYSKAIELDSNYANAYYNRGELYRLQKKYDLALADYSKAIEI-NPNYAYAY-- 410
Query: 70 QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR YS L+ ++ + D KA+ ++P AY +G + L + + AL+ + +
Sbjct: 411 ---YNRGNLYSDLQKYELALADYSKAIDINPNYADAYNNRGVVYYNLQKYDLALADYNQA 467
>gi|434385177|ref|YP_007095788.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
gi|428016167|gb|AFY92261.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
Length = 496
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E + G ++ + + A++D+ AIQ NP A RG R+ALG+ A+ D ++A
Sbjct: 52 ERFLAAGVSKYRKGDKRGALADYNRAIQLNPRYALAHVNRGVVRSALGDRQGALSDFNRA 111
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+E +P + RG + ++ + A+ED + + +D + AY G +G+ +
Sbjct: 112 IEIDPKYPQAYNNRGAIKYELGNKRGAIEDYTRAIAIDYKFAQAYYNRGATRYELGDKRG 171
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + AI LD N+ A+ +L + + A+E + + +D + AY+ RG +
Sbjct: 172 ALADYNIAIALDPNYGAAYYSRGVVRAELGDKQGAIEDYNRAIALDPNHAGAYYNRGAIK 231
Query: 596 HGLGQHKKAIKDLSSGLGIDP 616
LG A D + ++P
Sbjct: 232 SELGDRHAASADFDRAILLNP 252
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 107/221 (48%), Gaps = 7/221 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ G+++ +G A++ +++ ++ +P Y A + RG R+ + + A+SDF AI+
Sbjct: 55 LAAGVSKYRKGDKRGALADYNRAIQLNPRYALAHVNRGVVRSALGDRQGALSDFNRAIEI 114
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P +A+ RG + LG AI+D ++A+ + A + RG ++ D A+
Sbjct: 115 DPKYPQAYNNRGAIKYELGNKRGAIEDYTRAIAIDYKFAQAYYNRGATRYELGDKRGALA 174
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + + LD +AY G+ + +G+ + A E + +AI LD N A+ + +L
Sbjct: 175 DYNIAIALDPNYGAAYYSRGVVRAELGDKQGAIEDYNRAIALDPNHAGAYYNRGAIKSEL 234
Query: 565 ANSEKALECLQQVLYI-------DKRFSKAYHLRGLLLHGL 598
+ A + + + D R S +Y+ ++ H L
Sbjct: 235 GDRHAASADFDRAILLNPHYASKDYRISVSYYSPIVIFHPL 275
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 7/214 (3%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG A + QR L A D A + +AG + R+G R AL D ++A++ P
Sbjct: 30 RGAAMSAQRPLLAQKQDRLAAAERFLAAGVSKYRKGDKRGALA-------DYNRAIQLNP 82
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
A RG+V D A+ D + +++D + AY G +G + A E +
Sbjct: 83 RYALAHVNRGVVRSALGDRQGALSDFNRAIEIDPKYPQAYNNRGAIKYELGNKRGAIEDY 142
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI +D F +A+ + +L + AL + +D + AY+ RG++ LG
Sbjct: 143 TRAIAIDYKFAQAYYNRGATRYELGDKRGALADYNIAIALDPNYGAAYYSRGVVRAELGD 202
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ AI+D + + +DP++ Y R + +G+
Sbjct: 203 KQGAIEDYNRAIALDPNHAGAYYNRGAIKSELGD 236
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 75/150 (50%)
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ ++ D A+ D + ++L+ A+ G+ S++G+ + A +AI++D
Sbjct: 58 GVSKYRKGDKRGALADYNRAIQLNPRYALAHVNRGVVRSALGDRQGALSDFNRAIEIDPK 117
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +A+ + +L N A+E + + ID +F++AY+ RG + LG + A+ D +
Sbjct: 118 YPQAYNNRGAIKYELGNKRGAIEDYTRAIAIDYKFAQAYYNRGATRYELGDKRGALADYN 177
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +DP+ Y R +G+ + A+
Sbjct: 178 IAIALDPNYGAAYYSRGVVRAELGDKQGAI 207
>gi|395786883|ref|ZP_10466610.1| hypothetical protein ME5_01928 [Bartonella tamiae Th239]
gi|423718198|ref|ZP_17692388.1| hypothetical protein MEG_01928 [Bartonella tamiae Th307]
gi|395423181|gb|EJF89377.1| hypothetical protein ME5_01928 [Bartonella tamiae Th239]
gi|395426631|gb|EJF92758.1| hypothetical protein MEG_01928 [Bartonella tamiae Th307]
Length = 270
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+A+ +++ L+ P Y ALIGRG +L+ A++DFT+AI++ + G AW R
Sbjct: 106 AALKDYNRALQIKPDYDVALIGRGNLYRLNGQLDNALNDFTKAIETGTTDGRAWHNRALI 165
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
A G+ AI+D A+ +P + + RG+ D++ A +D +A ++LD
Sbjct: 166 EQAQGQHQAAIKDFGAAMSRQPQAPAPYNGRGLSYIALSDWDNAFDDFNAAIRLDANIAE 225
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+++ + G++KKA ++ KA+ LD F A
Sbjct: 226 SWSNQAMVYEHRGDFKKAHNSYAKALSLDPQFKPA 260
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%)
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ L+ +K D + SAY G A G+ + A A+QL+ F A+ + Y+
Sbjct: 40 IASLTNVIKADPRDPSAYNVRGAAYGRAGKTRDALADFTTALQLNPQFYNAYANRALIYR 99
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
L N++ AL+ + L I + A RG L GQ A+ D + + ++
Sbjct: 100 HLNNTDAALKDYNRALQIKPDYDVALIGRGNLYRLNGQLDNALNDFTKAIETGTTDGRAW 159
Query: 623 YLRASCYHAIGEYREAV 639
+ RA A G+++ A+
Sbjct: 160 HNRALIEQAQGQHQAAI 176
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 84/204 (41%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+ T I+++P A+ RG A G++ +A+ D + AL+ P + R ++
Sbjct: 40 IASLTNVIKADPRDPSAYNVRGAAYGRAGKTRDALADFTTALQLNPQFYNAYANRALIYR 99
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ +AA++D + +++ + A G G+ A KAI+ AW
Sbjct: 100 HLNNTDAALKDYNRALQIKPDYDVALIGRGNLYRLNGQLDNALNDFTKAIETGTTDGRAW 159
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ Q + A++ + + Y+ RGL L A D ++ + +
Sbjct: 160 HNRALIEQAQGQHQAAIKDFGAAMSRQPQAPAPYNGRGLSYIALSDWDNAFDDFNAAIRL 219
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
D + E +A Y G++++A
Sbjct: 220 DANIAESWSNQAMVYEHRGDFKKA 243
>gi|406982865|gb|EKE04132.1| hypothetical protein ACD_20C00104G0026 [uncultured bacterium]
Length = 356
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 118/245 (48%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK ++ + ++L D + +AL+ G+ +++ AI ++ +AI+ NP + A+
Sbjct: 40 GKLEESLKTYRELLSIDSVNVQALVNIGSTLFLMGKVDEAIDNYKKAIELNPESVSAYMN 99
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
A +G+ EAI+ K++E P++ D G+ + ++ A+E+ + +KLD
Sbjct: 100 LANTYAEIGKYDEAIEGYKKSIEISPDNIDAYSSLGLAFQDLRKYDEAMENYRSALKLDP 159
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
EN Y + +++ A E + KA+ + N ++ + +L K+ E
Sbjct: 160 ENYEHYVNVASVYMQKTQFEDAIEFYKKAVNFNNNDYKSLICIANALSELKKYNKSFEYY 219
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q+ L + ++KA+ G+ L G KKAI++ + +DP+N + A+ G
Sbjct: 220 QKALAVKPDYAKAHLCYGISLSESGNIKKAIEEYRKVIELDPTNSRGYMILANILVEEGL 279
Query: 635 YREAV 639
Y EAV
Sbjct: 280 YDEAV 284
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
EL I + IQ P EA+ G A G+ E+++ + L + + L
Sbjct: 7 ELNKVIEGARKKIQETPDNVEAYFVLGTTLALSGKLEESLKTYRELLSIDSVNVQALVNI 66
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G F + A+++ ++L+ E+ SAY L + IG+Y +A E + K+I++ +
Sbjct: 67 GSTLFLMGKVDEAIDNYKKAIELNPESVSAYMNLANTYAEIGKYDEAIEGYKKSIEISPD 126
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
++A+ L +QDL ++A+E + L +D
Sbjct: 127 NIDAYSSLGLAFQDLRKYDEAMENYRSALKLD 158
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D S G+A + KY A+ + LK DP E + + + + E AI +
Sbjct: 127 NIDAYSSLGLAFQDLRKYDEAMENYRSALKLDPENYEHYVNVASVYMQKTQFEDAIEFYK 186
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+ N + ++ A + L + ++ + KAL +P+ A GI + +
Sbjct: 187 KAVNFNNNDYKSLICIANALSELKKYNKSFEYYQKALAVKPDYAKAHLCYGISLSESGNI 246
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+E+ ++LD N Y L L G Y +A + + KAI+LD + A+ +
Sbjct: 247 KKAIEEYRKVIELDPTNSRGYMILANILVEEGLYDEAVDNYKKAIELDNTNVLAYVAIGN 306
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+ E+AL+ +Q ID + Y +
Sbjct: 307 TFVLTDKLEEALKYYRQASQIDPDNDEIYMI 337
>gi|306841308|ref|ZP_07474017.1| TPR domain-containing protein [Brucella sp. BO2]
gi|306288611|gb|EFM59947.1| TPR domain-containing protein [Brucella sp. BO2]
Length = 283
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 74 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 133
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 134 QYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 192
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 193 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 252
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 253 DKAKAANSYARAVQLDPKYKPA 274
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 83/204 (40%), Gaps = 34/204 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 54 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 149
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
G L Q AL Q + + +AYH RGL+ G HK+AI+D S + +
Sbjct: 150 GRLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 199
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
+ + E R Y A+G+Y A
Sbjct: 200 NSTAPEPYNGRGISYVALGDYDNA 223
>gi|449068029|ref|YP_007435111.1| hypothetical protein SacN8_10065 [Sulfolobus acidocaldarius N8]
gi|449070302|ref|YP_007437383.1| hypothetical protein SacRon12I_10085 [Sulfolobus acidocaldarius
Ron12/I]
gi|449036537|gb|AGE71963.1| hypothetical protein SacN8_10065 [Sulfolobus acidocaldarius N8]
gi|449038810|gb|AGE74235.1| hypothetical protein SacRon12I_10085 [Sulfolobus acidocaldarius
Ron12/I]
Length = 420
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 133/270 (49%), Gaps = 15/270 (5%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE----------ALIGRGTARAFQREL- 431
+ +RG+A N Y+ AI FD+ ++ +P + + AL G+ A +L
Sbjct: 47 YHFNRGLAYFNLNNYSEAIREFDEAIRLNPFHADSHYYKALSLIALQRSGSVNAGISDLY 106
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI +F EAI+ +P E ++G A LG EA+ + A++ P + + + + I
Sbjct: 107 ERAILEFDEAIKIDPKNPEYHYQKGLALEILGRQYEALLEYQDAIKLNPRNPEYYYRKAI 166
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + + A+ ++ ++L+ +N + Y L L S+G+ K+A + KAI L+
Sbjct: 167 ILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVA 226
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR-GLLLHGLGQHKKAIKDLSS 610
E + ++L + L+ + + + YH R G+L + LG+++KA+ +L
Sbjct: 227 EYYHQKGLILKELKRYDDVLKDYDNAIKLSPN-NPEYHFRKGVLYYELGKYEKAVMELEE 285
Query: 611 GLGIDPSNIECLY-LRASCYHAIGEYREAV 639
+ ++P+N E Y L + +H + Y +AV
Sbjct: 286 SVRLNPNNPEYHYQLGLALFHVMM-YEDAV 314
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 122/259 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ +G+A G+ A+ + +K +P PE + Q + AI++ A
Sbjct: 125 EYHYQKGLALEILGRQYEALLEYQDAIKLNPRNPEYYYRKAIILQDQEKYVDAIAEVDTA 184
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP + R+ ++G+ EA+ L KA+ P A+ H++G++ + K ++
Sbjct: 185 IRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVAEYYHQKGLILKELKRYDD 244
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
++D +KL N + G+ +G+Y+KA ++++L+ N E L
Sbjct: 245 VLKDYDNAIKLSPNNPEYHFRKGVLYYELGKYEKAVMELEESVRLNPNNPEYHYQLGLAL 304
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ E A+E + + +D + + Y+ +G L L ++ KAIK+ + ++P++
Sbjct: 305 FHVMMYEDAVEEFDKAVKLDPQNPQYYYYKGNALKALWKYDKAIKEYDKAISLNPNDPLP 364
Query: 622 LYLRASCYHAIGEYREAVI 640
Y + +G+Y EA++
Sbjct: 365 HYQKGVVLKTLGKYEEAIV 383
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 118/242 (48%), Gaps = 10/242 (4%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAIS 436
++ + I ++ KY AI+ D ++ +P + +AL+ + + L+ A+
Sbjct: 159 EYYYRKAIILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKALLLKSMGK-----LKEALD 213
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+AI NP E + ++G L + ++D A++ PN+ + +G++ ++
Sbjct: 214 QLDKAISLNPQVAEYYHQKGLILKELKRYDDVLKDYDNAIKLSPNNPEYHFRKGVLYYEL 273
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ AV +L V+L+ N + LGLAL + Y+ A E KA++LD + + +
Sbjct: 274 GKYEKAVMELEESVRLNPNNPEYHYQLGLALFHVMMYEDAVEEFDKAVKLDPQNPQYYYY 333
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ L +KA++ + + ++ ++ +G++L LG++++AI +L + ++P
Sbjct: 334 KGNALKALWKYDKAIKEYDKAISLNPNDPLPHYQKGVVLKTLGKYEEAIVELDEAIKLNP 393
Query: 617 SN 618
N
Sbjct: 394 DN 395
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 67/137 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ +G+ GKY A+ ++ ++ +P PE G A E A+ +F +A
Sbjct: 261 EYHFRKGVLYYELGKYEKAVMELEESVRLNPNNPEYHYQLGLALFHVMMYEDAVEEFDKA 320
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P + + +G A AL + +AI++ KA+ PN +++G+V +
Sbjct: 321 VKLDPQNPQYYYYKGNALKALWKYDKAIKEYDKAISLNPNDPLPHYQKGVVLKTLGKYEE 380
Query: 502 AVEDLSACVKLDKENKS 518
A+ +L +KL+ +N+
Sbjct: 381 AIVELDEAIKLNPDNQQ 397
>gi|23500690|ref|NP_700130.1| TPR domain-containing protein [Brucella suis 1330]
gi|62317211|ref|YP_223064.1| hypothetical protein BruAb2_0269 [Brucella abortus bv. 1 str.
9-941]
gi|83269193|ref|YP_418484.1| hypothetical protein BAB2_0271 [Brucella melitensis biovar Abortus
2308]
gi|161621016|ref|YP_001594902.1| hypothetical protein BCAN_B0985 [Brucella canis ATCC 23365]
gi|163845077|ref|YP_001622732.1| hypothetical protein BSUIS_B0956 [Brucella suis ATCC 23445]
gi|225686724|ref|YP_002734696.1| TPR repeat-containing protein [Brucella melitensis ATCC 23457]
gi|256015725|ref|YP_003105734.1| TPR domain-containing protein [Brucella microti CCM 4915]
gi|256262142|ref|ZP_05464674.1| RNA-binding region RNP-1 [Brucella melitensis bv. 2 str. 63/9]
gi|260544449|ref|ZP_05820270.1| RNA-binding region RNP-1 protein [Brucella abortus NCTC 8038]
gi|260565013|ref|ZP_05835498.1| RNA-binding region RNP-1 protein [Brucella melitensis bv. 1 str.
16M]
gi|260567784|ref|ZP_05838253.1| RNA-binding region RNP-1 protein [Brucella suis bv. 4 str. 40]
gi|260756289|ref|ZP_05868637.1| TPR repeat-containing protein [Brucella abortus bv. 6 str. 870]
gi|260759716|ref|ZP_05872064.1| TPR repeat-containing protein [Brucella abortus bv. 4 str. 292]
gi|260762956|ref|ZP_05875288.1| TPR repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260882112|ref|ZP_05893726.1| TPR repeat-containing protein [Brucella abortus bv. 9 str. C68]
gi|261217555|ref|ZP_05931836.1| TPR repeat-containing protein [Brucella ceti M13/05/1]
gi|261320430|ref|ZP_05959627.1| TPR repeat-containing protein [Brucella ceti M644/93/1]
gi|261750658|ref|ZP_05994367.1| TPR repeat-containing protein [Brucella suis bv. 5 str. 513]
gi|261753914|ref|ZP_05997623.1| TPR repeat-containing protein [Brucella suis bv. 3 str. 686]
gi|265990258|ref|ZP_06102815.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992636|ref|ZP_06105193.1| TPR repeat-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|297249260|ref|ZP_06932961.1| hypothetical protein BAYG_02006 [Brucella abortus bv. 5 str. B3196]
gi|376278911|ref|YP_005108944.1| TPR domain-containing protein [Brucella suis VBI22]
gi|384223472|ref|YP_005614637.1| hypothetical protein BS1330_II0956 [Brucella suis 1330]
gi|423168901|ref|ZP_17155603.1| hypothetical protein M17_02590 [Brucella abortus bv. 1 str. NI435a]
gi|423171666|ref|ZP_17158340.1| hypothetical protein M19_02198 [Brucella abortus bv. 1 str. NI474]
gi|423174604|ref|ZP_17161274.1| hypothetical protein M1A_02001 [Brucella abortus bv. 1 str. NI486]
gi|423176481|ref|ZP_17163147.1| hypothetical protein M1E_00743 [Brucella abortus bv. 1 str. NI488]
gi|423181095|ref|ZP_17167735.1| hypothetical protein M1G_02194 [Brucella abortus bv. 1 str. NI010]
gi|423184228|ref|ZP_17170864.1| hypothetical protein M1I_02196 [Brucella abortus bv. 1 str. NI016]
gi|423187377|ref|ZP_17173990.1| hypothetical protein M1K_02194 [Brucella abortus bv. 1 str. NI021]
gi|423189799|ref|ZP_17176408.1| hypothetical protein M1M_01480 [Brucella abortus bv. 1 str. NI259]
gi|23464339|gb|AAN34135.1| TPR domain protein [Brucella suis 1330]
gi|62197404|gb|AAX75703.1| TPR domain protein [Brucella abortus bv. 1 str. 9-941]
gi|82939467|emb|CAJ12437.1| RNA-binding region RNP-1 (RNA recognition motif):TPR repeat
[Brucella melitensis biovar Abortus 2308]
gi|161337827|gb|ABX64131.1| TPR repeat-containing protein [Brucella canis ATCC 23365]
gi|163675800|gb|ABY39910.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225642829|gb|ACO02742.1| TPR repeat-containing protein [Brucella melitensis ATCC 23457]
gi|255998385|gb|ACU50072.1| TPR domain protein [Brucella microti CCM 4915]
gi|260097720|gb|EEW81594.1| RNA-binding region RNP-1 protein [Brucella abortus NCTC 8038]
gi|260152656|gb|EEW87749.1| RNA-binding region RNP-1 protein [Brucella melitensis bv. 1 str.
16M]
gi|260154449|gb|EEW89530.1| RNA-binding region RNP-1 protein [Brucella suis bv. 4 str. 40]
gi|260670034|gb|EEX56974.1| TPR repeat-containing protein [Brucella abortus bv. 4 str. 292]
gi|260673377|gb|EEX60198.1| TPR repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260676397|gb|EEX63218.1| TPR repeat-containing protein [Brucella abortus bv. 6 str. 870]
gi|260871640|gb|EEX78709.1| TPR repeat-containing protein [Brucella abortus bv. 9 str. C68]
gi|260922644|gb|EEX89212.1| TPR repeat-containing protein [Brucella ceti M13/05/1]
gi|261293120|gb|EEX96616.1| TPR repeat-containing protein [Brucella ceti M644/93/1]
gi|261740411|gb|EEY28337.1| TPR repeat-containing protein [Brucella suis bv. 5 str. 513]
gi|261743667|gb|EEY31593.1| TPR repeat-containing protein [Brucella suis bv. 3 str. 686]
gi|262763506|gb|EEZ09538.1| TPR repeat-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000927|gb|EEZ13617.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263091843|gb|EEZ16165.1| RNA-binding region RNP-1 [Brucella melitensis bv. 2 str. 63/9]
gi|297173129|gb|EFH32493.1| hypothetical protein BAYG_02006 [Brucella abortus bv. 5 str. B3196]
gi|343384920|gb|AEM20411.1| TPR domain-containing protein [Brucella suis 1330]
gi|358260349|gb|AEU08082.1| TPR domain-containing protein [Brucella suis VBI22]
gi|374536088|gb|EHR07608.1| hypothetical protein M19_02198 [Brucella abortus bv. 1 str. NI474]
gi|374538107|gb|EHR09617.1| hypothetical protein M17_02590 [Brucella abortus bv. 1 str. NI435a]
gi|374539173|gb|EHR10679.1| hypothetical protein M1A_02001 [Brucella abortus bv. 1 str. NI486]
gi|374545685|gb|EHR17145.1| hypothetical protein M1G_02194 [Brucella abortus bv. 1 str. NI010]
gi|374546528|gb|EHR17987.1| hypothetical protein M1I_02196 [Brucella abortus bv. 1 str. NI016]
gi|374553496|gb|EHR24911.1| hypothetical protein M1E_00743 [Brucella abortus bv. 1 str. NI488]
gi|374555181|gb|EHR26590.1| hypothetical protein M1K_02194 [Brucella abortus bv. 1 str. NI021]
gi|374555839|gb|EHR27244.1| hypothetical protein M1M_01480 [Brucella abortus bv. 1 str. NI259]
Length = 295
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 86 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 145
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 146 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 204
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 264
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 265 DKAKAANSYARAVQLDPKYKPA 286
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 34/204 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 161
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S + +
Sbjct: 162 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 211
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
+ + E R Y A+G+Y A
Sbjct: 212 NSTAPEPYNGRGISYVALGDYDNA 235
>gi|325281840|ref|YP_004254382.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
splanchnicus DSM 20712]
gi|324313649|gb|ADY34202.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
splanchnicus DSM 20712]
Length = 652
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++N Y AI + + ++ +P Y A + RG A R+ E A++D+ +AI P
Sbjct: 64 RGLAKLNLDDYEGAIQDYSKAIELNPNYFHAYMYRGVAWHNLRKYEEAMADYAQAIALEP 123
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ RG A +G+ A +D SKAL + R +V K D+ A+ D
Sbjct: 124 RDAYVYANRGITEAEMGDFKAAEKDYSKALMIDSKLVAAYLNRAVVREKLDDWEGAMADC 183
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S+ ++L+ + A+ G EY A E +A++ + + ++
Sbjct: 184 SSAIRLNMFSDDAFGLRGYLWFQHKEYHNAIEDFNRALKANPENKRILMSRAMVWYEMKK 243
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ L +V+ ID + AY+ R +L +G+ AI+DL + ++P NI + R
Sbjct: 244 YPEVLNDYSEVIRIDSNYIYAYYNRAMLRAEVGEKNAAIRDLDKVVEMNPDNILIYFNRG 303
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG +Y +AI F++ LK +P L+ R ++ ++D++E I+ +
Sbjct: 200 RGYLWFQHKEYHNAIEDFNRALKANPENKRILMSRAMVWYEMKKYPEVLNDYSEVIRIDS 259
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ R RA +GE AI+DL K +E P++ I RG++ +D+ A +D
Sbjct: 260 NYIYAYYNRAMLRAEVGEKNAAIRDLDKVVEMNPDNILIYFNRGLLKMDIRDWYGAYDDF 319
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ + L + AY + +++ A++ H A+Q+
Sbjct: 320 TESIHLYPDFVKAYLARAAVNQELKDFEAADKDHYLAMQI 359
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 89/220 (40%), Gaps = 34/220 (15%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
R GQ + + AI + + + +P ++ RG+ D+ A++D S ++L+
Sbjct: 29 RMGQNAIYFDDYISAIDNFNNIIRVKPYLSEPYFFRGLAKLNLDDYEGAIQDYSKAIELN 88
Query: 514 KENKSAYTYLGLAL----------------------------------SSIGEYKKAEEA 539
AY Y G+A + +G++K AE+
Sbjct: 89 PNYFHAYMYRGVAWHNLRKYEEAMADYAQAIALEPRDAYVYANRGITEAEMGDFKAAEKD 148
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ KA+ +D + A+ + + L + E A+ + ++ A+ LRG L
Sbjct: 149 YSKALMIDSKLVAAYLNRAVVREKLDDWEGAMADCSSAIRLNMFSDDAFGLRGYLWFQHK 208
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ AI+D + L +P N L RA ++ + +Y E +
Sbjct: 209 EYHNAIEDFNRALKANPENKRILMSRAMVWYEMKKYPEVL 248
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E+ + + T I A +A+ RG E +AI+DLS LE EP++ L
Sbjct: 465 ESYVEELTGRIMQTGDA-DAYLIRGSIYLNQKEYAKAIEDLSAILEKEPDNLLALFNLAN 523
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D+ +V+D + +++ + +Y + E + + +++D +F+
Sbjct: 524 ARMLMFDYIESVDDKIPRIVGEQQQ----------MQRKIDYSQVIEGYNECLRIDPDFV 573
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A ++ Y E+A+E QVL +DK ++AY RGLL GQ A DLS
Sbjct: 574 FALFNMANVYAKNGEIERAIETFNQVLRLDKDIAEAYFNRGLLYIYTGQKALANADLSKA 633
Query: 612 --LGI 614
LGI
Sbjct: 634 GELGI 638
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 380 SVDFRLSRGIAQVNEGK----YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
SVD ++ R + + + + Y+ I +++ L+ DP + AL A E+E AI
Sbjct: 534 SVDDKIPRIVGEQQQMQRKIDYSQVIEGYNECLRIDPDFVFALFNMANVYAKNGEIERAI 593
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
F + ++ + EA+ RG G+ A DLSKA E SA
Sbjct: 594 ETFNQVLRLDKDIAEAYFNRGLLYIYTGQKALANADLSKAGELGIVSA 641
>gi|384217582|ref|YP_005608748.1| hypothetical protein BJ6T_38860 [Bradyrhizobium japonicum USDA 6]
gi|354956481|dbj|BAL09160.1| hypothetical protein BJ6T_38860 [Bradyrhizobium japonicum USDA 6]
Length = 287
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A + +Y AI FD +K DP Y A + R A + + + A D+ EAI+
Sbjct: 111 NRGVAHLRRREYELAIEAFDNAIKLDPGYGAAFVNRAGAYLKKNDHQRAAHDYDEAIRLQ 170
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P++ AW R RA LG S EA++D +AL+ SA + RG+++ K +F AA++D
Sbjct: 171 PASRAAWSGRCWTRAVLGASREALEDCDRALQSGSTSAAVYDSRGLIHLKMGEFGAAIDD 230
Query: 506 LSACVKLDKENKSAYTYLGLA 526
++ ++ E SA GLA
Sbjct: 231 YNSALRAAPELASALFGRGLA 251
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 4/200 (2%)
Query: 431 LEAAISDFTEAIQSNPSAGEA----WKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
L+A I T IQ+ P + A + RG A A G+ AI D +++ P A
Sbjct: 50 LDARIGACTTFIQARPDSTAALAIAYNNRGNAYTAKGDYDSAISDFDQSIALNPTYAKAF 109
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ RG+ + + +++ A+E +KLD +A+ A ++++A + +AI+L
Sbjct: 110 NNRGVAHLRRREYELAIEAFDNAIKLDPGYGAAFVNRAGAYLKKNDHQRAAHDYDEAIRL 169
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
AW L S +ALE + L + Y RGL+ +G+ AI
Sbjct: 170 QPASRAAWSGRCWTRAVLGASREALEDCDRALQSGSTSAAVYDSRGLIHLKMGEFGAAID 229
Query: 607 DLSSGLGIDPSNIECLYLRA 626
D +S L P L+ R
Sbjct: 230 DYNSALRAAPELASALFGRG 249
>gi|427730150|ref|YP_007076387.1| hypothetical protein Nos7524_2981 [Nostoc sp. PCC 7524]
gi|427366069|gb|AFY48790.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
Length = 280
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 100/191 (52%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G Q +G +AI+ ++Q L +DP Y A RG + + AI+D+ EAI+
Sbjct: 65 QGQKQHAQGNLQAAIASYNQALSQDPEYAAAYKARGLTYFDLGDKQKAIADYNEAIRLAA 124
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG ARA+LG+ AI D ++A+ PN A+ + RG D + ++ED
Sbjct: 125 NDAEAFNLRGNARASLGDQRGAITDYNEAIRLSPNYAEAYNNRGNALSVQGDKSGSIEDF 184
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L+ AY G A ++ G+ + A + +AI+L+RNF A+ + +
Sbjct: 185 NQAIRLNPRYAIAYNNRGNARAAQGDLQGAISDYNQAIRLNRNFGPAYNNRGNARAAQGD 244
Query: 567 SEKALECLQQV 577
+ AL+ LQ+
Sbjct: 245 RQAALQDLQKA 255
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A +G + +I F+Q ++ +P Y A RG ARA Q +L+ AISD+ +AI+ N
Sbjct: 166 NRGNALSVQGDKSGSIEDFNQAIRLNPRYAIAYNNRGNARAAQGDLQGAISDYNQAIRLN 225
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFK 495
+ G A+ RG ARAA G+ A+QDL KA + F+ + + L+++ + N +
Sbjct: 226 RNFGPAYNNRGNARAAQGDRQAALQDLQKAADIFQKQNNNDLYQQVMNNIQ 276
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q L+AAI+ + +A+ +P A+K RG LG+ +AI D ++A+ N A+ +
Sbjct: 72 QGNLQAAIASYNQALSQDPEYAAAYKARGLTYFDLGDKQKAIADYNEAIRLAANDAEAFN 131
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG D A+ D + ++L AY G ALS G+ + E +AI+L+
Sbjct: 132 LRGNARASLGDQRGAITDYNEAIRLSPNYAEAYNNRGNALSVQGDKSGSIEDFNQAIRLN 191
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ + + + A+ Q + +++ F AY+ RG G + A++D
Sbjct: 192 PRYAIAYNNRGNARAAQGDLQGAISDYNQAIRLNRNFGPAYNNRGNARAAQGDRQAALQD 251
Query: 608 L 608
L
Sbjct: 252 L 252
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G AI+ +++ ++ EA RG ARA + AI+D+ EAI+ +
Sbjct: 98 ARGLTYFDLGDKQKAIADYNEAIRLAANDAEAFNLRGNARASLGDQRGAITDYNEAIRLS 157
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG A + G+ +I+D ++A+ P A + RG D A+ D
Sbjct: 158 PNYAEAYNNRGNALSVQGDKSGSIEDFNQAIRLNPRYAIAYNNRGNARAAQGDLQGAISD 217
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ ++L++ AY G A ++ G+ + A
Sbjct: 218 YNQAIRLNRNFGPAYNNRGNARAAQGDRQAA 248
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N AG A+ + GQ + A G AI ++AL +P A RG+ F D A+
Sbjct: 56 NSQAGSAYIQ-GQKQHAQGNLQAAIASYNQALSQDPEYAAAYKARGLTYFDLGDKQKAIA 114
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++L + A+ G A +S+G+ + A + +AI+L N+ EA+ +
Sbjct: 115 DYNEAIRLAANDAEAFNLRGNARASLGDQRGAITDYNEAIRLSPNYAEAYNNRGNALSVQ 174
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ ++E Q + ++ R++ AY+ RG G + AI D + +
Sbjct: 175 GDKSGSIEDFNQAIRLNPRYAIAYNNRGNARAAQGDLQGAISDYNQAI 222
>gi|449105205|ref|ZP_21741910.1| hypothetical protein HMPREF9729_00175 [Treponema denticola ASLM]
gi|451969511|ref|ZP_21922740.1| hypothetical protein HMPREF9728_01940 [Treponema denticola US-Trep]
gi|448967192|gb|EMB47833.1| hypothetical protein HMPREF9729_00175 [Treponema denticola ASLM]
gi|451701608|gb|EMD56069.1| hypothetical protein HMPREF9728_01940 [Treponema denticola US-Trep]
Length = 369
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 113/240 (47%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI ++ LK +P Y E+++ RG + AI DF+ I+ P+ A+ R
Sbjct: 74 AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G+ + + D++ A++ +P + RG + ++ KD++ A+ + + +KL+ + A
Sbjct: 134 LEFGDFEKVLCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDA 193
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL +I +Y A + KA++L + + H+ L + A+ + +
Sbjct: 194 YFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIK 253
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
I+ ++AY RG + L + +IKDL + + SN Y +A ++ E EA+
Sbjct: 254 INNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAI 313
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 3/265 (1%)
Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
I++S I+ ++ L RG+ KY AI F ++++ P P A R +
Sbjct: 78 INRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFG 137
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E + D AI+ +P +K RG+ L + AI + ++AL+ P +D R
Sbjct: 138 DFEKVLCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSR 197
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ KD+N+A+ D +KL + Y ++GL+ ++ EY A A K I+++
Sbjct: 198 GLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNT 257
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
EA+ Y L N + +++ L + + ++ + + L+ + +AI L
Sbjct: 258 DAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLE 317
Query: 610 SGLGIDPSNIECLYLRASCYHAIGE 634
G+ + P + ++A Y ++ E
Sbjct: 318 EGINLFPDYYDFYQVKAKIYRSLSE 342
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 81/173 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +AI + Q LK +P +A RG ++ +A+SD+ +A++ + + + G
Sbjct: 173 YDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIG 232
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ AL E AI +K ++ A+ RG + F K+++ +++DL + L N
Sbjct: 233 LSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSN 292
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ + +AL S E +A + + I L ++ + + + Y+ L+ K
Sbjct: 293 EVVFYNKAVALYSKNELNEAIDCLEEGINLFPDYYDFYQVKAKIYRSLSEQTK 345
>gi|296126827|ref|YP_003634079.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296018643|gb|ADG71880.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 211
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 34/211 (16%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + A+ F +AI+ NP+ +++ RG ++ L + EA++D ++A+E +PN
Sbjct: 19 KDYKNALEVFDKAIELNPNYAKSYLYRGVSKLLLSQKEEALEDFNRAIELDPN------- 71
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
C K Y Y G+ + ++ +A + KAI+LD
Sbjct: 72 --------------------CAKF-------YFYRGINMVALNMDIEALKDFDKAIELDS 104
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N+++A+ H L +E+A+ +V+ +D FS+AY+LRG+ GL HKK ++D+
Sbjct: 105 NYVKAYLHRGLSKLVLNKNEEAISDFNKVIELDANFSEAYYLRGISKFGLDMHKKGMEDI 164
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++P N +LR S + + +EA+
Sbjct: 165 DKVIELNPDNPFAYFLRGSIKKKLNKNKEAL 195
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+ N Y +A+ +FD+ ++ +P Y ++ + RG ++ + E A+ DF AI+ +P+
Sbjct: 12 AVTYYNNKDYKNALEVFDKAIELNPNYAKSYLYRGVSKLLLSQKEEALEDFNRAIELDPN 71
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + RG AL +EA++D KA+E + N RG+ A+ D +
Sbjct: 72 CAKFYFYRGINMVALNMDIEALKDFDKAIELDSNYVKAYLHRGLSKLVLNKNEEAISDFN 131
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD AY G++ + +KK E K I+L+
Sbjct: 132 KVIELDANFSEAYYLRGISKFGLDMHKKGMEDIDKVIELNP------------------- 172
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
D F AY LRG + L ++K+A+KD
Sbjct: 173 -------------DNPF--AYFLRGSIKKKLNKNKEALKDF 198
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F RGI V A+ FD+ ++ D Y +A + RG ++ + E AISDF + I
Sbjct: 75 FYFYRGINMVALNMDIEALKDFDKAIELDSNYVKAYLHRGLSKLVLNKNEEAISDFNKVI 134
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ + + EA+ RG ++ L + ++D+ K +E P++ RG + K A
Sbjct: 135 ELDANFSEAYYLRGISKFGLDMHKKGMEDIDKVIELNPDNPFAYFLRGSIKKKLNKNKEA 194
Query: 503 VEDLSACVKLDKENKS 518
++D +++K+ S
Sbjct: 195 LKDFEKYEEMEKQKSS 210
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG++++ K AIS F+++++ D + EA RG ++ + + D + I+
Sbjct: 111 LHRGLSKLVLNKNEEAISDFNKVIELDANFSEAYYLRGISKFGLDMHKKGMEDIDKVIEL 170
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
NP A+ RG + L ++ EA++D K E E + I
Sbjct: 171 NPDNPFAYFLRGSIKKKLNKNKEALKDFEKYEEMEKQKSSI 211
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 13 LNKTHKTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDSLLAQS 66
LN + + + D+ + +DS A R L+KL ++ +++K I LD+ +++
Sbjct: 86 LNMDIEALKDFDKAIELDSNYVKAYLHR-GLSKLVLNKNEEAISDFNKVIE-LDANFSEA 143
Query: 67 YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
Y ++ I L++HK + D DK ++L+P AY L+G L + +EAL +
Sbjct: 144 YYLRGISKFG-----LDMHKKGMEDIDKVIELNPDNPFAYFLRGSIKKKLNKNKEALKDF 198
Query: 127 EKGYEHALHQSADL 140
EK YE Q + +
Sbjct: 199 EK-YEEMEKQKSSI 211
>gi|427722550|ref|YP_007069827.1| hypothetical protein Lepto7376_0567 [Leptolyngbya sp. PCC 7376]
gi|427354270|gb|AFY36993.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 493
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 117/246 (47%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI +DQ LK +P + +G ++ AI +++A+ P++ E W +
Sbjct: 118 GKYEEAIDSYDQALKLEPDDYLSWDNKGDLLKELKQYHEAIQSYSKALVIKPNSAEIWYK 177
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG L + +A+ + SKALE NS IL RG + + + F A+ + ++L
Sbjct: 178 RGLVFELLSQDNDALMNYSKALEINQNSPHILCARGSILVRLERFQEALMCFNRAIELKA 237
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ A+++ G L + + + A ++ +A+ ++ N W H + ++ L
Sbjct: 238 DCVEAWSHKGFLLEQLKKIEDAIFSYGQALAVNPNQEILWYHRGNLFLRQKQYQRGLHSY 297
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+VL +++ ++ + +G+ L+ LG A K L I+P + AIG+
Sbjct: 298 DEVLRLNREHYQSLNNKGVSLYKLGDVHGAFKCFQKVLEINPYAFSAWNNQGQICKAIGD 357
Query: 635 YREAVI 640
Y+EA+I
Sbjct: 358 YQEAII 363
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 126/279 (45%), Gaps = 2/279 (0%)
Query: 351 KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE 410
K D+LKE + + + + K S + ++ RG+ + A+ + + L+
Sbjct: 144 KGDLLKELKQYHEAIQSYSKALVIKPNSAEIWYK--RGLVFELLSQDNDALMNYSKALEI 201
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+ P L RG+ + A+ F AI+ EAW +G L + +AI
Sbjct: 202 NQNSPHILCARGSILVRLERFQEALMCFNRAIELKADCVEAWSHKGFLLEQLKKIEDAIF 261
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
+AL PN + + RG + + K + + ++L++E+ + G++L +
Sbjct: 262 SYGQALAVNPNQEILWYHRGNLFLRQKQYQRGLHSYDEVLRLNREHYQSLNNKGVSLYKL 321
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+ A + K ++++ AW + Q + + + ++A+ C + L ++ + SK +
Sbjct: 322 GDVHGAFKCFQKVLEINPYAFSAWNNQGQICKAIGDYQEAIICYDKALKVEPKQSKIWSK 381
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
RGL L LG +++AI + +D S E LY +A+ +
Sbjct: 382 RGLCLAKLGHYEEAINSFQQAIQLDKSYAEALYAQAAVF 420
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + + +Y + +D++L+ + + ++L +G + ++ A F + ++ NP
Sbjct: 280 RGNLFLRQKQYQRGLHSYDEVLRLNREHYQSLNNKGVSLYKLGDVHGAFKCFQKVLEINP 339
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A AW +GQ A+G+ EAI KAL+ EP + I +RG+ K + A+
Sbjct: 340 YAFSAWNNQGQICKAIGDYQEAIICYDKALKVEPKQSKIWSKRGLCLAKLGHYEEAINSF 399
Query: 507 SACVKLDKENKSAYTY----------LGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++LDK A L LAL +G+ A +++ QLDRNF
Sbjct: 400 QQAIQLDKSYAEALYAQAAVFAVQQNLQLALEYLGKAISANPKYIQVAQLDRNF 453
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 95/189 (50%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W +G + + EA+ +A+ + ++ + RGIV F+ + + A++ + V+
Sbjct: 39 WNSQGLEQGIQEKYREALISFDEAIAIDAEHSETWYNRGIVLFQLQRYGEALDSYNHAVE 98
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L ++ A+ G L +G+Y++A +++ +A++L+ + +W + ++L +A+
Sbjct: 99 LRADSVPAWNNRGNTLKVLGKYEEAIDSYDQALKLEPDDYLSWDNKGDLLKELKQYHEAI 158
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+ + L I ++ ++ RGL+ L Q A+ + S L I+ ++ L R S
Sbjct: 159 QSYSKALVIKPNSAEIWYKRGLVFELLSQDNDALMNYSKALEINQNSPHILCARGSILVR 218
Query: 632 IGEYREAVI 640
+ ++EA++
Sbjct: 219 LERFQEALM 227
>gi|189346021|ref|YP_001942550.1| hypothetical protein Clim_0478 [Chlorobium limicola DSM 245]
gi|189340168|gb|ACD89571.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM
245]
Length = 343
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + A + +T + NP + EA+ RG +AA G+ A+ D S+AL+ +P+ A + R
Sbjct: 41 DFQGASALYTAVLSGNPRSAEAYNNRGLCKAASGDVTGAVADYSEALKLDPSLAAASNNR 100
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ K ++ AV D + ++++ Y LGLA ++G+ A + A+ L
Sbjct: 101 GLAMAKIGKYHEAVLDYNQALRINAVLPEVYNNLGLARIALGDQSGALDDFNTALALKPF 160
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ EA + Q L+ +AL QQV+ +++ Y L +G HK A+ D +
Sbjct: 161 YPEALFNRGCARQKLSEHREALRDFQQVISFRSGYAEPYFYAALSRSAMGDHKGALVDYT 220
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ I PS E RA G+YR A+
Sbjct: 221 KAIAISPSYAEAFAGRALAKIRSGDYRGAL 250
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 112/247 (45%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G + A +++ +L +P EA RG +A ++ A++D++EA++ +PS A
Sbjct: 39 KGDFQGASALYTAVLSGNPRSAEAYNNRGLCKAASGDVTGAVADYSEALKLDPSLAAASN 98
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A A +G+ EA+ D ++AL ++ + G+ D + A++D + + L
Sbjct: 99 NRGLAMAKIGKYHEAVLDYNQALRINAVLPEVYNNLGLARIALGDQSGALDDFNTALALK 158
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
A G A + E+++A + I + E + + + + + AL
Sbjct: 159 PFYPEALFNRGCARQKLSEHREALRDFQQVISFRSGYAEPYFYAALSRSAMGDHKGALVD 218
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + I +++A+ R L G ++ A+ D + +G+ N E Y RA +
Sbjct: 219 YTKAIAISPSYAEAFAGRALAKIRSGDYRGALDDYDTVIGLQSDNPELYYNRALVKVKLS 278
Query: 634 EYREAVI 640
+Y A I
Sbjct: 279 DYPGAEI 285
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 1/255 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G A++ + + LK DP A RG A A + A+ D+ +A++ N
Sbjct: 65 NRGLCKAASGDVTGAVADYSEALKLDPSLAAASNNRGLAMAKIGKYHEAVLDYNQALRIN 124
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
E + G AR ALG+ A+ D + AL +P + L RG K + A+ D
Sbjct: 125 AVLPEVYNNLGLARIALGDQSGALDDFNTALALKPFYPEALFNRGCARQKLSEHREALRD 184
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ Y Y L+ S++G++K A + KAI + ++ EA+
Sbjct: 185 FQQVISFRSGYAEPYFYAALSRSAMGDHKGALVDYTKAIAISPSYAEAFAGRALAKIRSG 244
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ AL+ V+ + + Y+ R L+ L + A D S L + E +LR
Sbjct: 245 DYRGALDDYDTVIGLQSDNPELYYNRALVKVKLSDYPGAEIDCSLALERNKVYAEAFFLR 304
Query: 626 ASCYHAIGEYREAVI 640
+G RE ++
Sbjct: 305 GIVRSELGN-REGML 318
>gi|17158736|ref|NP_478247.1| hypothetical protein all7600 [Nostoc sp. PCC 7120]
gi|17134685|dbj|BAB77243.1| all7600 [Nostoc sp. PCC 7120]
Length = 225
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 87/151 (57%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ +G + AI+ F+ +++ +P + E RG A++ R+ AAISDF A++ N
Sbjct: 43 NQGVQKLEQGNFNGAIADFNSVVQMNPRFYEGFCLRGLAKSQLRDFSAAISDFNLALRLN 102
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG + LG+ +AI D ++ ++ +PNS D + G+ +F+ + A+ D
Sbjct: 103 PKHTDAYNGRGISYVELGDFQKAIADFNQTVKIDPNSQDGYYNLGLAHFRQGNHQQAIAD 162
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ ++++ AY GLA ++G+ K A
Sbjct: 163 FNKALQINPNLADAYGNRGLAQYALGDSKSA 193
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G + Q AI+DF +Q NP E + RG A++ L + AI D + AL P
Sbjct: 44 QGVQKLEQGNFNGAIADFNSVVQMNPRFYEGFCLRGLAKSQLRDFSAAISDFNLALRLNP 103
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
D + RGI + DF A+ D + VK+D ++ Y LGLA G +++A
Sbjct: 104 KHTDAYNGRGISYVELGDFQKAIADFNQTVKIDPNSQDGYYNLGLAHFRQGNHQQAIADF 163
Query: 541 LKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQV--LYIDKRFSKAYH 589
KA+Q++ N +A+G+ L Q+ L +S+ A+ LQQ L++ + ++AY
Sbjct: 164 NKALQINPNLADAYGNRGLAQY--ALGDSKSAVTDLQQAAKLFLKQGDTQAYQ 214
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 68/126 (53%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ +++AIS F+ L+ +P + +A GRG + + + AI+DF + ++ +P
Sbjct: 78 RGLAKSQLRDFSAAISDFNLALRLNPKHTDAYNGRGISYVELGDFQKAIADFNQTVKIDP 137
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
++ + + G A G +AI D +KAL+ PN AD RG+ + D +AV DL
Sbjct: 138 NSQDGYYNLGLAHFRQGNHQQAIADFNKALQINPNLADAYGNRGLAQYALGDSKSAVTDL 197
Query: 507 SACVKL 512
KL
Sbjct: 198 QQAAKL 203
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AA+S I + + + +G + G AI D + ++ P + RG
Sbjct: 20 MPAAVSAREAQIPLKATNFQEYYNQGVQKLEQGNFNGAIADFNSVVQMNPRFYEGFCLRG 79
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + +DF+AA+ D + ++L+ ++ AY G++ +G+++KA + +++D N
Sbjct: 80 LAKSQLRDFSAAISDFNLALRLNPKHTDAYNGRGISYVELGDFQKAIADFNQTVKIDPNS 139
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + +L + N ++A+ + L I+ + AY RGL + LG K A+ DL
Sbjct: 140 QDGYYNLGLAHFRQGNHQQAIADFNKALQINPNLADAYGNRGLAQYALGDSKSAVTDL 197
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 73/153 (47%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +G+ + +FN A+ D ++ V+++ + GLA S + ++ A A++L
Sbjct: 42 YNQGVQKLEQGNFNGAIADFNSVVQMNPRFYEGFCLRGLAKSQLRDFSAAISDFNLALRL 101
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +A+ Y +L + +KA+ Q + ID Y+ GL G H++AI
Sbjct: 102 NPKHTDAYNGRGISYVELGDFQKAIADFNQTVKIDPNSQDGYYNLGLAHFRQGNHQQAIA 161
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + L I+P+ + R +A+G+ + AV
Sbjct: 162 DFNKALQINPNLADAYGNRGLAQYALGDSKSAV 194
>gi|428320554|ref|YP_007118436.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428244234|gb|AFZ10020.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 411
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 34/254 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG Q+ +G + AI+ +D+ L+ P EA RG A LE AI+ + +A++
Sbjct: 162 NRGYEQLMKGDFEGAIASYDKALEIKPYSYEAWFNRGHALYDLGRLEDAITSYDKALEIK 221
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A A LG +AI KALE +P+ + + RG+
Sbjct: 222 PDLHEAWYIRGLALANLGRLEDAIASYDKALEIKPDYHEAWYNRGV-------------- 267
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
AL ++G + ++ KA+++ ++ EAW + +DL
Sbjct: 268 --------------------ALGNLGRLENEIASYDKALEIKPDYHEAWYNRGVALRDLG 307
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E A+ + L +A+++RGL L LG+ + A+ L P E Y+R
Sbjct: 308 RIEDAIASCDKALKFKPDLHEAWYIRGLALGKLGRIEDAVASWDKALKFKPDYHEAWYIR 367
Query: 626 ASCYHAIGEYREAV 639
+G +A+
Sbjct: 368 GVALVKLGRIEDAI 381
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T K+ I D + RG+A N G+ AI+ +D+ L+ P Y EA RG A
Sbjct: 210 AITSYDKALEIKPDLHEAWYIRGLALANLGRLEDAIASYDKALEIKPDYHEAWYNRGVAL 269
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
LE I+ + +A++ P EAW RG A LG +AI KAL+F+P+ +
Sbjct: 270 GNLGRLENEIASYDKALEIKPDYHEAWYNRGVALRDLGRIEDAIASCDKALKFKPDLHEA 329
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ RG+ K AV +K + A+ G+AL +G + A + KA++
Sbjct: 330 WYIRGLALGKLGRIEDAVASWDKALKFKPDYHEAWYIRGVALVKLGRIEDAITSFDKALK 389
Query: 546 L 546
Sbjct: 390 F 390
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K S + +RG A + G+ AI+ +D+ L+ P EA RG A A LE AI+
Sbjct: 187 KPYSYEAWFNRGHALYDLGRLEDAITSYDKALEIKPDLHEAWYIRGLALANLGRLEDAIA 246
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
+ +A++ P EAW RG A LG I KALE +P+ + + RG+
Sbjct: 247 SYDKALEIKPDYHEAWYNRGVALGNLGRLENEIASYDKALEIKPDYHEAWYNRGVALRDL 306
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
A+ +K + A+ GLAL +G + A + KA++ ++ EAW
Sbjct: 307 GRIEDAIASCDKALKFKPDLHEAWYIRGLALGKLGRIEDAVASWDKALKFKPDYHEAW 364
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I D+ +RG+A N G+ + I+ +D+ L+ P Y EA RG A
Sbjct: 244 AIASYDKALEIKPDYHEAWYNRGVALGNLGRLENEIASYDKALEIKPDYHEAWYNRGVAL 303
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+E AI+ +A++ P EAW RG A LG +A+ KAL+F+P+ +
Sbjct: 304 RDLGRIEDAIASCDKALKFKPDLHEAWYIRGLALGKLGRIEDAVASWDKALKFKPDYHEA 363
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ RG+ K A+ +K ++ A +AL +G
Sbjct: 364 WYIRGVALVKLGRIEDAITSFDKALKFKPDDHLASKNRTIALKKLG 409
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
NR L + I CDKAL+ P L +A+ ++G A LGR E+A++ W+K
Sbjct: 298 NRGVALRDLGRIEDAIASCDKALKFKPDLHEAWYIRGLALGKLGRIEDAVASWDK 352
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 61 SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKE 120
+L + Y + NR L + I DKAL++ P L +A+ ++G A + LGR E
Sbjct: 183 ALEIKPYSYEAWFNRGHALYDLGRLEDAITSYDKALEIKPDLHEAWYIRGLALANLGRLE 242
Query: 121 EALSVWEKGYE 131
+A++ ++K E
Sbjct: 243 DAIASYDKALE 253
>gi|20093095|ref|NP_619170.1| hypothetical protein MA4306 [Methanosarcina acetivorans C2A]
gi|19918428|gb|AAM07650.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1079
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 10/254 (3%)
Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
A VN G+Y A+ F+ +L+ + EAL GR + E A+ D+ +Q PS
Sbjct: 754 ALVNLGRYEEAVECFNPLLELESENIEALDGRAFSLTKSGRQEEALEDYDRILQLEPSNS 813
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+A + LG EA + L P + +I++ +G DF AA+
Sbjct: 814 KAMTEKASLFEELGRYEEAASTYGEILRITPENREIMYRQGKALEAMGDFEAAIACYDQI 873
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN--- 566
+ LD +N A G A + + +Y++A ++ KAI+ N AW +++ AN
Sbjct: 874 LALDPKNIDAINNKGFAYAKMEKYQEAIASYDKAIEYAPNNATAW-----YFKGCANFAI 928
Query: 567 --SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ A+E +V+ + A++ RG L + +G+ ++I +S L I+P+ LY
Sbjct: 929 SSNIAAVESFDKVVTLKPDCITAWYNRGYLYNVMGEVNESINSYNSALAINPNEPSVLYN 988
Query: 625 RASCYHAIGEYREA 638
+ ++ I EY +A
Sbjct: 989 KRFAHYRIKEYEDA 1002
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 113/261 (43%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+SV+ + +G + KY +I FD L+ D A G+G A + E AI +
Sbjct: 61 VSVEGLIKKGNDLYSLKKYELSIECFDDALEMDSNSSMACYGKGCALTSLKRYEEAIDCY 120
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+A++S P++ +W ++G VEAI K+ + + + ++ + + K
Sbjct: 121 DKALESFPTSSWSWYQKGDEYIQTQNYVEAINCYEKSFSMDSYLSRVWFQKALASEKLGM 180
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
A+ + + L G A + + Y +A A+ + + E W
Sbjct: 181 EQEALASYDSSIGLGSNVSKTLQMKGKAYTGLENYDEAMRCFNGALNITPDDFELWTQKG 240
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
Y + E A++C + + ++ ++A++ +G+ L G+G +++A+ L +P N
Sbjct: 241 IMYDMSGDYEAAIQCYDEAISLNPDLTEAWYNKGVDLEGMGLYQEALTCYEFVLLSEPEN 300
Query: 619 IECLYLRASCYHAIGEYREAV 639
+ L + C +G EA+
Sbjct: 301 LNTLQKKGFCLEQLGRNEEAL 321
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 108/260 (41%), Gaps = 34/260 (13%)
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y A G+ +A + E A+ + A+ NP EAW +G A LG S EA++
Sbjct: 642 YDAAWYGKASAYSKLNMHEDALDAYDTALSINPLRTEAWYEKGSALDKLGRSEEALECYK 701
Query: 474 KALEFEPNSADILH------------ERGIVNF----------------------KFKDF 499
KALE P S+D L+ E I + +
Sbjct: 702 KALEINPQSSDALYGMASISNTLGRSEEAIAYYDQLLAANASDPEALQGKSQALVNLGRY 761
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AVE + ++L+ EN A +L+ G ++A E + + +QL+ + +A
Sbjct: 762 EEAVECFNPLLELESENIEALDGRAFSLTKSGRQEEALEDYDRILQLEPSNSKAMTEKAS 821
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+++L E+A ++L I + + +G L +G + AI L +DP NI
Sbjct: 822 LFEELGRYEEAASTYGEILRITPENREIMYRQGKALEAMGDFEAAIACYDQILALDPKNI 881
Query: 620 ECLYLRASCYHAIGEYREAV 639
+ + + Y + +Y+EA+
Sbjct: 882 DAINNKGFAYAKMEKYQEAI 901
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 112/254 (44%), Gaps = 2/254 (0%)
Query: 388 GIAQVNE--GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
G+A ++ G+ AI+ +DQ+L + PEAL G+ A E A+ F ++
Sbjct: 716 GMASISNTLGRSEEAIAYYDQLLAANASDPEALQGKSQALVNLGRYEEAVECFNPLLELE 775
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EA R + G EA++D + L+ EP+++ + E+ + + + A
Sbjct: 776 SENIEALDGRAFSLTKSGRQEEALEDYDRILQLEPSNSKAMTEKASLFEELGRYEEAAST 835
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++ EN+ G AL ++G+++ A + + + LD ++A + Y +
Sbjct: 836 YGEILRITPENREIMYRQGKALEAMGDFEAAIACYDQILALDPKNIDAINNKGFAYAKME 895
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++A+ + + + A++ +G + + A++ + + P I Y R
Sbjct: 896 KYQEAIASYDKAIEYAPNNATAWYFKGCANFAISSNIAAVESFDKVVTLKPDCITAWYNR 955
Query: 626 ASCYHAIGEYREAV 639
Y+ +GE E++
Sbjct: 956 GYLYNVMGEVNESI 969
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+Y A S + +IL+ P E + +G A + EAAI+ + + + +P +A
Sbjct: 827 GRYEEAASTYGEILRITPENREIMYRQGKALEAMGDFEAAIACYDQILALDPKNIDAINN 886
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A A + + EAI KA+E+ PN+A + +G NF AAVE V L
Sbjct: 887 KGFAYAKMEKYQEAIASYDKAIEYAPNNATAWYFKGCANFAISSNIAAVESFDKVVTLKP 946
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +A+ G + +GE ++ ++ A+ ++ N + + + E A C
Sbjct: 947 DCITAWYNRGYLYNVMGEVNESINSYNSALAINPNEPSVLYNKRFAHYRIKEYEDASACK 1006
Query: 575 QQVLYIDKRFSKAYHLRG 592
++ ID F A RG
Sbjct: 1007 TKLDSIDPGFVTALQNRG 1024
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 125/294 (42%), Gaps = 35/294 (11%)
Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
DF L +GI G Y +AI +D+ + +P EA +G + A++ +
Sbjct: 232 DFELWTQKGIMYDMSGDYEAAIQCYDEAISLNPDLTEAWYNKGVDLEGMGLYQEALTCYE 291
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ S P +++G LG + EA+Q + L + P+ AD + +G V D+
Sbjct: 292 FVLLSEPENLNTLQKKGFCLEQLGRNEEALQCYEEILTYSPDDADAWYSKGSVLNAMGDY 351
Query: 500 NAAVE------DLSACVKLDK------ENKSAYTYLGLALSSIGEYKKA--EEAHLKAIQ 545
+AA+ + A +++++ E +AY S + E+K + + + K +
Sbjct: 352 DAAIACYDRALNPDAGIEVEEIGEALLEKFNAYDSALPGYSEVPEFKSSAVKIWYDKGLA 411
Query: 546 LDR--NF---LEAW--------GHLTQFYQD------LANSEKALECLQQVLYIDKRFSK 586
D+ N+ LE + GH +Y L E+A C + L ++ ++K
Sbjct: 412 FDKLENYESALECYDSVLETESGHAVVWYMKALDLDRLDRYEEAAGCYDKALKLNSEYAK 471
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
++ +G GQ+K A K + +D + Y +A G+Y EA++
Sbjct: 472 VWYRKGYDSSKFGQYKDAAKSFDKAVNLDDNYTLAWYGKAFALAKTGDYEEALV 525
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 105/246 (42%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A G+ A+ + + L+ +P +AL G + E AI+ + + + +N
Sbjct: 683 KGSALDKLGRSEEALECYKKALEINPQSSDALYGMASISNTLGRSEEAIAYYDQLLAANA 742
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S EA + + QA LG EA++ + LE E + + L R K A+ED
Sbjct: 743 SDPEALQGKSQALVNLGRYEEAVECFNPLLELESENIEALDGRAFSLTKSGRQEEALEDY 802
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L+ N A T +G Y++A + + +++ E + + + +
Sbjct: 803 DRILQLEPSNSKAMTEKASLFEELGRYEEAASTYGEILRITPENREIMYRQGKALEAMGD 862
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E A+ C Q+L +D + A + +G + ++++AI + P+N Y +
Sbjct: 863 FEAAIACYDQILALDPKNIDAINNKGFAYAKMEKYQEAIASYDKAIEYAPNNATAWYFKG 922
Query: 627 SCYHAI 632
AI
Sbjct: 923 CANFAI 928
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 112/248 (45%), Gaps = 1/248 (0%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
V +G+ + S+ +++L + P+ E LI +G ++ E +I F +A++ + ++ A
Sbjct: 41 VGDGEPVAPPSL-EEVLAQSPVSVEGLIKKGNDLYSLKKYELSIECFDDALEMDSNSSMA 99
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+G A +L EAI KALE P S+ +++G + +++ A+
Sbjct: 100 CYGKGCALTSLKRYEEAIDCYDKALESFPTSSWSWYQKGDEYIQTQNYVEAINCYEKSFS 159
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+D + LA +G ++A ++ +I L N + + Y L N ++A+
Sbjct: 160 MDSYLSRVWFQKALASEKLGMEQEALASYDSSIGLGSNVSKTLQMKGKAYTGLENYDEAM 219
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
C L I + + +G++ G ++ AI+ + ++P E Y +
Sbjct: 220 RCFNGALNITPDDFELWTQKGIMYDMSGDYEAAIQCYDEAISLNPDLTEAWYNKGVDLEG 279
Query: 632 IGEYREAV 639
+G Y+EA+
Sbjct: 280 MGLYQEAL 287
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 108/295 (36%), Gaps = 51/295 (17%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G A Y A+ F+ L P E +G + EAAI + EAI NP
Sbjct: 205 KGKAYTGLENYDEAMRCFNGALNITPDDFELWTQKGIMYDMSGDYEAAIQCYDEAISLNP 264
Query: 447 SAGEAW----------------------------------KRRGQARAALGESVEAIQDL 472
EAW +++G LG + EA+Q
Sbjct: 265 DLTEAWYNKGVDLEGMGLYQEALTCYEFVLLSEPENLNTLQKKGFCLEQLGRNEEALQCY 324
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+ L + P+ AD + +G V D++AA+ + D G+ + IGE
Sbjct: 325 EEILTYSPDDADAWYSKGSVLNAMGDYDAAIACYDRALNPDA---------GIEVEEIGE 375
Query: 533 --------YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
Y A + + + + ++ W + L N E ALEC VL +
Sbjct: 376 ALLEKFNAYDSALPGYSEVPEFKSSAVKIWYDKGLAFDKLENYESALECYDSVLETESGH 435
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ ++++ L L L ++++A L ++ + Y + G+Y++A
Sbjct: 436 AVVWYMKALDLDRLDRYEEAAGCYDKALKLNSEYAKVWYRKGYDSSKFGQYKDAA 490
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 90/253 (35%), Gaps = 35/253 (13%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C I D S+G G Y +AI+ +D+ L D IG F
Sbjct: 323 CYEEILTYSPDDADAWYSKGSVLNAMGDYDAAIACYDRALNPDAGIEVEEIGEALLEKFN 382
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL------------------GESV---- 466
++A+ ++E + SA + W +G A L G +V
Sbjct: 383 A-YDSALPGYSEVPEFKSSAVKIWYDKGLAFDKLENYESALECYDSVLETESGHAVVWYM 441
Query: 467 ------------EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
EA KAL+ A + + +G + KF + A + V LD
Sbjct: 442 KALDLDRLDRYEEAAGCYDKALKLNSEYAKVWYRKGYDSSKFGQYKDAAKSFDKAVNLDD 501
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
A+ AL+ G+Y++A + K + + E W + L ++A +C
Sbjct: 502 NYTLAWYGKAFALAKTGDYEEALVCYEKVLAAAPDSAEIWYNKGLLLDQLERHQEASDCY 561
Query: 575 QQVLYIDKRFSKA 587
+ L I+ +S A
Sbjct: 562 SKALQINPGYSVA 574
>gi|225629417|ref|ZP_03787450.1| TPR domain-containing protein [Brucella ceti str. Cudo]
gi|225615913|gb|EEH12962.1| TPR domain-containing protein [Brucella ceti str. Cudo]
Length = 315
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 106 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 165
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 166 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 224
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 225 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 284
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 285 DKAKAANSYARTVQLDPKYKPA 306
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 34/204 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 86 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 145
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 146 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 181
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S + +
Sbjct: 182 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 231
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
+ + E R Y A+G+Y A
Sbjct: 232 NSTAPEPYNGRGISYVALGDYDNA 255
>gi|334118912|ref|ZP_08493000.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333459142|gb|EGK87757.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 1004
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 128/296 (43%), Gaps = 8/296 (2%)
Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIF 404
F W + N KR + V S +++ +D RG N +Y A+ +
Sbjct: 540 FYWFLRGNVLNNLKRYDEALV---SYDRALELDPNYQSAWAKRGDVLSNLKRYDKALESY 596
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
D+ ++ D Y A RG + + A+ + AI+ + + AW RG L
Sbjct: 597 DRAIELDANYRWAWANRGGVLYNLKRYDEALVSYDRAIELDANYRWAWANRGGVLYNLKR 656
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
EA+ +A+E + N RG V + K ++ A+ ++LD N+SA+ G
Sbjct: 657 YDEALVSYDRAIELDANYRWAWANRGGVLYNLKRYDEALVSYDRAIELDANNQSAWANRG 716
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
L + Y +A ++ +AI+LD N AW + L ++AL + + +D +
Sbjct: 717 NVLYKLKRYDEALVSYDRAIELDANNQSAWANQGNVLYKLKRYDEALVSYDRAIELDANY 776
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ LRGLLL L ++++A+ + +D + +LR + Y EA++
Sbjct: 777 QLVWFLRGLLLDTLKRYEEALVSYDRAIELDTNYQLVWFLRGLLLDTLKRYEEALV 832
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 114/255 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG N +Y A+ +D+ ++ D Y A RG + + A+ + AI+ +
Sbjct: 612 NRGGVLYNLKRYDEALVSYDRAIELDANYRWAWANRGGVLYNLKRYDEALVSYDRAIELD 671
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ AW RG L EA+ +A+E + N+ RG V +K K ++ A+
Sbjct: 672 ANYRWAWANRGGVLYNLKRYDEALVSYDRAIELDANNQSAWANRGNVLYKLKRYDEALVS 731
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++LD N+SA+ G L + Y +A ++ +AI+LD N+ W L
Sbjct: 732 YDRAIELDANNQSAWANQGNVLYKLKRYDEALVSYDRAIELDANYQLVWFLRGLLLDTLK 791
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+AL + + +D + + LRGLLL L ++++A+ + + + + R
Sbjct: 792 RYEEALVSYDRAIELDTNYQLVWFLRGLLLDTLKRYEEALVSYDRAIELGDLSSYFFFYR 851
Query: 626 ASCYHAIGEYREAVI 640
A + + E ++
Sbjct: 852 AIAILGLNRWDEGLV 866
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ D+ +K D Y A +G + + A++ AI+ + + W R
Sbjct: 486 RYYEAVECLDKAIKIDSNYVRAWAHKGNVLDSLKRYDEALAFLDRAIELDDNNKFYWFLR 545
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L EA+ +ALE +PN +RG V K ++ A+E ++LD
Sbjct: 546 GNVLNNLKRYDEALVSYDRALELDPNYQSAWAKRGDVLSNLKRYDKALESYDRAIELDAN 605
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G L ++ Y +A ++ +AI+LD N+ AW + +L ++AL
Sbjct: 606 YRWAWANRGGVLYNLKRYDEALVSYDRAIELDANYRWAWANRGGVLYNLKRYDEALVSYD 665
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + +D + A+ RG +L+ L ++ +A+ + +D +N R + + + Y
Sbjct: 666 RAIELDANYRWAWANRGGVLYNLKRYDEALVSYDRAIELDANNQSAWANRGNVLYKLKRY 725
Query: 636 REAVI 640
EA++
Sbjct: 726 DEALV 730
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 8/224 (3%)
Query: 425 RAFQRELEAAIS--DFTEAIQSN----PSAGEA--WKRRGQARAALGESVEAIQDLSKAL 476
+A+ E+E I D+ A++ S GEA W +G + L EA++ L KA+
Sbjct: 439 KAYFDEIENCIEQKDYVSALEYAEKLVASRGEAKDWSVKGYCLSRLERYYEAVECLDKAI 498
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ + N +G V K ++ A+ L ++LD NK + G L+++ Y +A
Sbjct: 499 KIDSNYVRAWAHKGNVLDSLKRYDEALAFLDRAIELDDNNKFYWFLRGNVLNNLKRYDEA 558
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
++ +A++LD N+ AW +L +KALE + + +D + A+ RG +L+
Sbjct: 559 LVSYDRALELDPNYQSAWAKRGDVLSNLKRYDKALESYDRAIELDANYRWAWANRGGVLY 618
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L ++ +A+ + +D + R + + Y EA++
Sbjct: 619 NLKRYDEALVSYDRAIELDANYRWAWANRGGVLYNLKRYDEALV 662
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%)
Query: 50 RNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
+++ A+ + L+A E +D + +C S+LE + + DKA+++D ++A+ K
Sbjct: 452 KDYVSALEYAEKLVASRGEAKDWSVKGYCLSRLERYYEAVECLDKAIKIDSNYVRAWAHK 511
Query: 110 GCAFSALGRKEEALSVWEKGYE 131
G +L R +EAL+ ++ E
Sbjct: 512 GNVLDSLKRYDEALAFLDRAIE 533
>gi|428217630|ref|YP_007102095.1| hypothetical protein Pse7367_1375 [Pseudanabaena sp. PCC 7367]
gi|427989412|gb|AFY69667.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 317
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 14/263 (5%)
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
S+ ++++++ +GI +G++A AI+ +DQ+L P +A R +A ++ E
Sbjct: 5 SEDQNLAIEALFLKGINMSRDGRFADAIAFYDQVLAIQPNDYQAWYNRASALFSLQDYEG 64
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A++ + +A+ P + EAW RG EAI A + + + R
Sbjct: 65 AVASYDKALTIYPDSPEAWYNRGSVLLNCNRLEEAIDSYEHATDLRSDYYQAWYSRASTF 124
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
K + A+E +++ + A+ G++L + +K+A EA +A++L+ +A
Sbjct: 125 LKLLRYAEALESCLRTIEIQPDYHPAWYGKGVSLFGLRRHKEAVEAFDRALELNPRRDKA 184
Query: 554 WGH-------LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
W H L Q+ Q +++ EKALE ID ++ +GL L+ + + +AI
Sbjct: 185 WFHRGLAQMGLGQYTQAVSSFEKALE-------IDPDKRDVWYHQGLALYHMDRLDEAIA 237
Query: 607 DLSSGLGIDPSNIECLYLRASCY 629
L + P N Y A CY
Sbjct: 238 SYEEALSMLPKNGTLYYNIACCY 260
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG+AQ+ G+Y A+S F++ L+ DP + +G A L+ AI+ + EA+
Sbjct: 186 FHRGLAQMGLGQYTQAVSSFEKALEIDPDKRDVWYHQGLALYHMDRLDEAIASYEEALSM 245
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
P G + + E++ AI +L A+E P
Sbjct: 246 LPKNGTLYYNIACCYSLQREAMAAIANLQHAIELNP 281
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 59/128 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G++ ++ A+ FD+ L+ +P +A RG A+ + A+S F +A++ +P
Sbjct: 154 KGVSLFGLRRHKEAVEAFDRALELNPRRDKAWFHRGLAQMGLGQYTQAVSSFEKALEIDP 213
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W +G A + EAI +AL P + + + ++ AA+ +L
Sbjct: 214 DKRDVWYHQGLALYHMDRLDEAIASYEEALSMLPKNGTLYYNIACCYSLQREAMAAIANL 273
Query: 507 SACVKLDK 514
++L+
Sbjct: 274 QHAIELNP 281
>gi|254411807|ref|ZP_05025583.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196181529|gb|EDX76517.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 639
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG N+GK SA++ Q ++ +P +A RG R + + A +D+T+ +Q +P
Sbjct: 387 RGKIYANQGKTQSALADLTQAIQLNPQNADAYYQRGNLRLELGDRQGAKADYTQVLQRDP 446
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ AW RGQ +A LG AI D ++A++ +PN +R + A++D
Sbjct: 447 NFTPAWVNRGQIQADLGHEQAAINDYTQAIQLKPNLVTAYLKRCRSRSNLGNQKGAIDDC 506
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L AY GLA G+ + A + AIQL+ +A+ + Q++ +
Sbjct: 507 TTAINLRPNQALAYQNRGLARQRRGDSRGAITDYTVAIQLNPEAADAYYNRGVARQEIED 566
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A+ Q + + ++ AY+ RGL LG AI DL
Sbjct: 567 TLGAIADYTQAIERNPDYALAYYERGLAQAQLGNRLAAINDL 608
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D RG ++ G A + + Q+L+ DP + A + RG +A +AAI+D+T+A
Sbjct: 416 DAYYQRGNLRLELGDRQGAKADYTQVLQRDPNFTPAWVNRGQIQADLGHEQAAINDYTQA 475
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ P+ A+ +R ++R+ LG AI D + A+ PN A RG+ + D
Sbjct: 476 IQLKPNLVTAYLKRCRSRSNLGNQKGAIDDCTTAINLRPNQALAYQNRGLARQRRGDSRG 535
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + ++L+ E AY G+A I + A + +AI+ + ++ A+
Sbjct: 536 AITDYTVAIQLNPEAADAYYNRGVARQEIEDTLGAIADYTQAIERNPDYALAYYERGLAQ 595
Query: 562 QDLANSEKALECLQQ 576
L N A+ LQQ
Sbjct: 596 AQLGNRLAAINDLQQ 610
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 7/215 (3%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
EAAI +++AI P A+ RG+ A G++ A+ DL++A++ P +AD ++RG
Sbjct: 364 EAAIDYYSQAITYQPQNATAYYYRGKIYANQGKTQSALADLTQAIQLNPQNADAYYQRGN 423
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + D A D + ++ D A+ G + +G + A + +AIQL N +
Sbjct: 424 LRLELGDRQGAKADYTQVLQRDPNFTPAWVNRGQIQADLGHEQAAINDYTQAIQLKPNLV 483
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ + +L N + A++ + + + AY RGL G + AI D +
Sbjct: 484 TAYLKRCRSRSNLGNQKGAIDDCTTAINLRPNQALAYQNRGLARQRRGDSRGAITDYTVA 543
Query: 612 LGIDPSNIECLYLRASCYH-------AIGEYREAV 639
+ ++P + Y R AI +Y +A+
Sbjct: 544 IQLNPEAADAYYNRGVARQEIEDTLGAIADYTQAI 578
>gi|150402041|ref|YP_001329335.1| hypothetical protein MmarC7_0114 [Methanococcus maripaludis C7]
gi|150033071|gb|ABR65184.1| TPR repeat-containing protein [Methanococcus maripaludis C7]
Length = 602
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 128/254 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A GKY AI FD+ L+ + Y E+ +G + E AI + +A++ +
Sbjct: 236 NKGYAIYELGKYEKAIICFDRSLELNFDYLESNYYKGDSLYELERYEEAIECYDKALEID 295
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P W +G + + L EAI+ L KALE + + +++G + + + A E
Sbjct: 296 PKNEYIWYSKGCSLSNLERYEEAIECLDKALEIDSKNEKFWNKKGYSLNELERYEEASEC 355
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L +++D +N+ + G AL+ + Y++A + +A++L+ N+ +A+ + L
Sbjct: 356 LDKALEIDSKNEKFWNNKGYALAGLERYEEAITCYDEALELNNNYSKAYKNKGYSLAGLE 415
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+EC + L ID ++KA +G L LG++++A++ + +D SN + +
Sbjct: 416 RYEEAIECYDKALEIDSNYTKAQQNKGNALFELGKYEEALECYDLVIAVDKSNEKAWADK 475
Query: 626 ASCYHAIGEYREAV 639
+ + Y EA+
Sbjct: 476 GNALFELERYEEAI 489
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 1/255 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ G+ G + +I FD+ L+ +P EAL+ +G E E AI F +A++
Sbjct: 32 IDSGLEYFGNGNFEKSIESFDETLRINPYNMEALVSKGYILYAINESEKAIECFDKALEI 91
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + W+ +G A L EAI+ K+LE + ++ + +G + + + A+E
Sbjct: 92 NSDYYDTWQYKGYALHDLERYEEAIECFDKSLEIYEENPEVYYMKGASLYGLERYEEAIE 151
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
L ++ N T G L + Y++A E KA++ ++L AW L
Sbjct: 152 CLDIALETYPNNIYMLTDKGNTLYELERYEEAIECFDKALKY-VSYLNAWNDKGNTLCKL 210
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+A++C + L ID + +G ++ LG+++KAI L ++ +E Y
Sbjct: 211 ERYSEAVQCYDKALEIDSSSYVLWGNKGYAIYELGKYEKAIICFDRSLELNFDYLESNYY 270
Query: 625 RASCYHAIGEYREAV 639
+ + + Y EA+
Sbjct: 271 KGDSLYELERYEEAI 285
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ + + S + F +G + +Y A D+ L+ D + +G A A
Sbjct: 321 CLDKALEIDSKNEKFWNKKGYSLNELERYEEASECLDKALEIDSKNEKFWNNKGYALAGL 380
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E AI+ + EA++ N + +A+K +G + A L EAI+ KALE + N
Sbjct: 381 ERYEEAITCYDEALELNNNYSKAYKNKGYSLAGLERYEEAIECYDKALEIDSNYTKAQQN 440
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G F+ + A+E + +DK N+ A+ G AL + Y++A E KAI+LD
Sbjct: 441 KGNALFELGKYEEALECYDLVIAVDKSNEKAWADKGNALFELERYEEAIECFDKAIELDS 500
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N E W + L E+++EC + L +D + ++ +G + L +++A+K
Sbjct: 501 NDKEIWNNKGDTLYKLERYEESIECYDEALELDSEDEELWNNKGNIFFKLENYEEALKCY 560
Query: 609 SSGLGIDPS 617
L I+ +
Sbjct: 561 DRALEINTN 569
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI +D+ L+ DP +G + + E AI +A++ + + W ++
Sbjct: 280 RYEEAIECYDKALEIDPKNEYIWYSKGCSLSNLERYEEAIECLDKALEIDSKNEKFWNKK 339
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + L EA + L KALE + + + +G + + A+ ++L+
Sbjct: 340 GYSLNELERYEEASECLDKALEIDSKNEKFWNNKGYALAGLERYEEAITCYDEALELNNN 399
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
AY G +L+ + Y++A E + KA+++D N+ +A + +L E+ALEC
Sbjct: 400 YSKAYKNKGYSLAGLERYEEAIECYDKALEIDSNYTKAQQNKGNALFELGKYEEALECYD 459
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
V+ +DK KA+ +G L L ++++AI+ + +D ++ E + + + Y
Sbjct: 460 LVIAVDKSNEKAWADKGNALFELERYEEAIECFDKAIELDSNDKEIWNNKGDTLYKLERY 519
Query: 636 REAV 639
E++
Sbjct: 520 EESI 523
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 106/219 (48%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ + + S + F ++G A +Y AI+ +D+ L+ + Y +A +G + A
Sbjct: 355 CLDKALEIDSKNEKFWNNKGYALAGLERYEEAITCYDEALELNNNYSKAYKNKGYSLAGL 414
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E AI + +A++ + + +A + +G A LG+ EA++ + + ++ +
Sbjct: 415 ERYEEAIECYDKALEIDSNYTKAQQNKGNALFELGKYEEALECYDLVIAVDKSNEKAWAD 474
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G F+ + + A+E ++LD +K + G L + Y+++ E + +A++LD
Sbjct: 475 KGNALFELERYEEAIECFDKAIELDSNDKEIWNNKGDTLYKLERYEESIECYDEALELDS 534
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
E W + + L N E+AL+C + L I+ F A
Sbjct: 535 EDEELWNNKGNIFFKLENYEEALKCYDRALEINTNFELA 573
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI FD+ LK Y A +G A+ + +A++ + S+ W +
Sbjct: 179 RYEEAIECFDKALKY-VSYLNAWNDKGNTLCKLERYSEAVQCYDKALEIDSSSYVLWGNK 237
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A LG+ +AI ++LE + + + +G ++ + + A+E +++D +
Sbjct: 238 GYAIYELGKYEKAIICFDRSLELNFDYLESNYYKGDSLYELERYEEAIECYDKALEIDPK 297
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N+ + G +LS++ Y++A E KA+++D + W +L E+A ECL
Sbjct: 298 NEYIWYSKGCSLSNLERYEEAIECLDKALEIDSKNEKFWNKKGYSLNELERYEEASECLD 357
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ L ID + K ++ +G L GL ++++AI
Sbjct: 358 KALEIDSKNEKFWNNKGYALAGLERYEEAI 387
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 113/254 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G + N +Y AI D+ L+ D + +G + E A +A++ +
Sbjct: 304 SKGCSLSNLERYEEAIECLDKALEIDSKNEKFWNKKGYSLNELERYEEASECLDKALEID 363
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ W +G A A L EAI +ALE N + +G + + A+E
Sbjct: 364 SKNEKFWNNKGYALAGLERYEEAITCYDEALELNNNYSKAYKNKGYSLAGLERYEEAIEC 423
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+++D A G AL +G+Y++A E + I +D++ +AW +L
Sbjct: 424 YDKALEIDSNYTKAQQNKGNALFELGKYEEALECYDLVIAVDKSNEKAWADKGNALFELE 483
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+EC + + +D + ++ +G L+ L +++++I+ L +D + E +
Sbjct: 484 RYEEAIECFDKAIELDSNDKEIWNNKGDTLYKLERYEESIECYDEALELDSEDEELWNNK 543
Query: 626 ASCYHAIGEYREAV 639
+ + + Y EA+
Sbjct: 544 GNIFFKLENYEEAL 557
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E +I F E ++ NP EA +G A+ ES +AI+ KALE + D +G
Sbjct: 44 FEKSIESFDETLRINPYNMEALVSKGYILYAINESEKAIECFDKALEINSDYYDTWQYKG 103
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + A+E +++ +EN Y G +L + Y++A E A++ N
Sbjct: 104 YALHDLERYEEAIECFDKSLEIYEENPEVYYMKGASLYGLERYEEAIECLDIALETYPNN 163
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVL-YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +L E+A+EC + L Y+ + A++ +G L L ++ +A++
Sbjct: 164 IYMLTDKGNTLYELERYEEAIECFDKALKYV--SYLNAWNDKGNTLCKLERYSEAVQCYD 221
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L ID S+ + + +G+Y +A+I
Sbjct: 222 KALEIDSSSYVLWGNKGYAIYELGKYEKAII 252
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S+ E W G G ++I+ + L P + + L +G + + + A+E
Sbjct: 26 SSTEDWIDSGLEYFGNGNFEKSIESFDETLRINPYNMEALVSKGYILYAINESEKAIECF 85
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++++ + + Y G AL DL
Sbjct: 86 DKALEINSDYYDTWQYKGYAL----------------------------------HDLER 111
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A+EC + L I + + Y+++G L+GL ++++AI+ L L P+NI L +
Sbjct: 112 YEEAIECFDKSLEIYEENPEVYYMKGASLYGLERYEEAIECLDIALETYPNNIYMLTDKG 171
Query: 627 SCYHAIGEYREAV 639
+ + + Y EA+
Sbjct: 172 NTLYELERYEEAI 184
>gi|186685791|ref|YP_001868987.1| hypothetical protein Npun_F5744 [Nostoc punctiforme PCC 73102]
gi|186468243|gb|ACC84044.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 280
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 99/186 (53%), Gaps = 1/186 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+R S + S +F L +G Q G +AI+ + + + ++ Y A GRG A +
Sbjct: 50 SRRSATASRGGEFYL-QGKNQHLNGDLQAAIASYSKAISQNSQYGAAYNGRGLAYFDLGD 108
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AI+D+ +A++ NP+ EA+ G ARA+L + EA++D S+A+ PN A+ + RG
Sbjct: 109 KEKAIADYNQALRINPNDAEAYNNLGNARASLEGNREAVKDYSEAIRLNPNYAEAYNNRG 168
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D A++DL ++L+ AY G A ++ G+ K A + +AI+L+ NF
Sbjct: 169 NARAANGDRKGAIDDLGQAIRLNPRYAIAYNNRGNARAANGDPKGAIADYNQAIRLNPNF 228
Query: 551 LEAWGH 556
A+ +
Sbjct: 229 APAYNN 234
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+L+AAI+ +++AI N G A+ RG A LG+ +AI D ++AL PN A+ +
Sbjct: 74 DLQAAIASYSKAISQNSQYGAAYNGRGLAYFDLGDKEKAIADYNQALRINPNDAEAYNNL 133
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + AV+D S ++L+ AY G A ++ G+ K A + +AI+L+
Sbjct: 134 GNARASLEGNREAVKDYSEAIRLNPNYAEAYNNRGNARAANGDRKGAIDDLGQAIRLNPR 193
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ A+ + + + A+ Q + ++ F+ AY+ RG G + A+KDL
Sbjct: 194 YAIAYNNRGNARAANGDPKGAIADYNQAIRLNPNFAPAYNNRGNARATNGDRQGALKDL 252
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 77/155 (49%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G+ AI SKA+ + RG+ F D A+ D + ++++ + AY
Sbjct: 73 GDLQAAIASYSKAISQNSQYGAAYNGRGLAYFDLGDKEKAIADYNQALRINPNDAEAYNN 132
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG A +S+ ++A + + +AI+L+ N+ EA+ + + + A++ L Q + ++
Sbjct: 133 LGNARASLEGNREAVKDYSEAIRLNPNYAEAYNNRGNARAANGDRKGAIDDLGQAIRLNP 192
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
R++ AY+ RG G K AI D + + ++P+
Sbjct: 193 RYAIAYNNRGNARAANGDPKGAIADYNQAIRLNPN 227
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 69/142 (48%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D AA+ S + + + +AY GLA +G+ +KA + +A++++ N EA+ +L
Sbjct: 74 DLQAAIASYSKAISQNSQYGAAYNGRGLAYFDLGDKEKAIADYNQALRINPNDAEAYNNL 133
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
L + +A++ + + ++ +++AY+ RG G K AI DL + ++P
Sbjct: 134 GNARASLEGNREAVKDYSEAIRLNPNYAEAYNNRGNARAANGDRKGAIDDLGQAIRLNPR 193
Query: 618 NIECLYLRASCYHAIGEYREAV 639
R + A G+ + A+
Sbjct: 194 YAIAYNNRGNARAANGDPKGAI 215
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%)
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+ + A ++ KAI + + A+ Y DL + EKA+ Q L I+ ++AY+
Sbjct: 73 GDLQAAIASYSKAISQNSQYGAAYNGRGLAYFDLGDKEKAIADYNQALRINPNDAEAYNN 132
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G L +++A+KD S + ++P+ E R + A G+ + A+
Sbjct: 133 LGNARASLEGNREAVKDYSEAIRLNPNYAEAYNNRGNARAANGDRKGAI 181
>gi|257061342|ref|YP_003139230.1| hypothetical protein Cyan8802_3576 [Cyanothece sp. PCC 8802]
gi|256591508|gb|ACV02395.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
Length = 261
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ G Y AI+ F Q ++ P P++ RG A +++ A++D+ AIQ N
Sbjct: 40 NQGVDKIGAGNYQGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQLN 99
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R A + + +A+ D S+A++ PN AD RG + AA+ D
Sbjct: 100 PQFAYAYGNRCYAFYQMKDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAIAD 159
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
+ ++L+ AY LA + +A + K++QLD NF +A+ + +TQF
Sbjct: 160 YTEAIRLNSNYAKAYYNRALAYNRAQLLPEAIADYTKSVQLDPNFADAYYNRGITQF--K 217
Query: 564 LANSEKALECLQQ 576
L N +A+ LQ+
Sbjct: 218 LGNESEAIADLQK 230
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 90/177 (50%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+DFT+AIQ P +++ RG A +G+ +A+ D + A++ P A R
Sbjct: 52 QGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQLNPQFAYAYGNRCY 111
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ KD+ A+ D S +KL+ Y Y G A +G ++ A + +AI+L+ N+
Sbjct: 112 AFYQMKDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAIADYTEAIRLNSNYA 171
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+A+ + Y +A+ + + +D F+ AY+ RG+ LG +AI DL
Sbjct: 172 KAYYNRALAYNRAQLLPEAIADYTKSVQLDPNFADAYYNRGITQFKLGNESEAIADL 228
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A GK A++ ++ ++ +P + A R A ++ + A+SD +EA
Sbjct: 70 DSYYNRGYAYHIIGKIDQALADYNLAIQLNPQFAYAYGNRCYAFYQMKDYQKALSDCSEA 129
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP+ + + RG A+ LG AI D ++A+ N A + R + + +
Sbjct: 130 IKLNPNYADFYIYRGNAQDDLGNHQAAIADYTEAIRLNSNYAKAYYNRALAYNRAQLLPE 189
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + V+LD AY G+ +G +A KA QL + G+ T
Sbjct: 190 AIADYTKSVQLDPNFADAYYNRGITQFKLGNESEAIADLQKASQL----FKTQGNTTY-- 243
Query: 562 QDLANSEKALECLQQV 577
S+KA + LQ++
Sbjct: 244 -----SQKANDTLQKL 254
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ ++++AIR L+S A++Y NRA Y++ +L I D K++QLDP AY
Sbjct: 155 AAIADYTEAIR-LNSNYAKAY-----YNRALAYNRAQLLPEAIADYTKSVQLDPNFADAY 208
Query: 107 ILKGCAFSALGRKEEALSVWEKG 129
+G LG + EA++ +K
Sbjct: 209 YNRGITQFKLGNESEAIADLQKA 231
>gi|281423115|ref|ZP_06254028.1| exported Tpr repeat-family protein [Prevotella oris F0302]
gi|281402451|gb|EFB33282.1| exported Tpr repeat-family protein [Prevotella oris F0302]
Length = 657
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 6/256 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ G Y A F+Q +K +P E R R R AI D+ AI +P
Sbjct: 65 RGIAKQRLGDYTGAEEDFNQAVKLNPYVHELFRERANNRIVLRSYVDAIHDYDRAIALDP 124
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEP---NSADILHERGIVNFKFKDFNAAV 503
E W R +R E + DL L+ P N+ ++ E + D A
Sbjct: 125 DNKEYWFNRALSRYYQHEVQQTRHDLQYILKRWPALPNTYALMTETYL---NANDTLQAR 181
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ V+++ + ++++ LG ++KA++A KAI N + + + +
Sbjct: 182 QWAEKTVRVNPYDGNSWSILGRLYLRQSNWRKADQAFGKAIHYTPNVVNNYTYRAMCRVN 241
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L +A+E + + +D A++ RGLL +G AIKD S L ++P+N++ LY
Sbjct: 242 LNKLRQAMEDFNKAIEMDPNSFLAHYNRGLLGLTVGDDNNAIKDFSYVLRLEPNNLQALY 301
Query: 624 LRASCYHAIGEYREAV 639
RA +G+YR A+
Sbjct: 302 NRALLLDRVGDYRGAI 317
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
+++GR R Q A F +AI P+ + R R L + +A++D +KA+
Sbjct: 199 SILGRLYLR--QSNWRKADQAFGKAIHYTPNVVNNYTYRAMCRVNLNKLRQAMEDFNKAI 256
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E +PNS + RG++ D N A++D S ++L+ N A L L +G+Y+ A
Sbjct: 257 EMDPNSFLAHYNRGLLGLTVGDDNNAIKDFSYVLRLEPNNLQALYNRALLLDRVGDYRGA 316
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+ + I NF + Y+ L + KA
Sbjct: 317 ISDYSRVISKFPNFWSGLLSRAKCYRHLGLTAKA 350
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 405 DQILKEDPMYPEALIGRGTARAFQR----ELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
DQ + Y ++ T RA R +L A+ DF +AI+ +P++ A RG
Sbjct: 215 DQAFGKAIHYTPNVVNNYTYRAMCRVNLNKLRQAMEDFNKAIEMDPNSFLAHYNRGLLGL 274
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
+G+ AI+D S L EPN+ L+ R ++ + D+ A+ D S +
Sbjct: 275 TVGDDNNAIKDFSYVLRLEPNNLQALYNRALLLDRVGDYRGAISDYSRVI 324
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 88/213 (41%), Gaps = 4/213 (1%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
R+ I I + P AW RG A+ LG+ A +D ++A++ P ++ E
Sbjct: 39 RDYVVVIQHCNNIISNRPYLYRAWFYRGIAKQRLGDYTGAEEDFNQAVKLNPYVHELFRE 98
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R + + A+ D + LD +NK + ALS +++ + H L R
Sbjct: 99 RANNRIVLRSYVDAIHDYDRAIALDPDNKE--YWFNRALSRYYQHEVQQTRHDLQYILKR 156
Query: 549 --NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +T+ Y + ++ +A + ++ + ++ ++ + G L +KA +
Sbjct: 157 WPALPNTYALMTETYLNANDTLQARQWAEKTVRVNPYDGNSWSILGRLYLRQSNWRKADQ 216
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ P+ + RA C + + R+A+
Sbjct: 217 AFGKAIHYTPNVVNNYTYRAMCRVNLNKLRQAM 249
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY---------- 533
D+L +R + ++ AA+ DL+AC++ D AY L + E+
Sbjct: 500 DLLLQRAVAYTTTYNYEAALNDLNACIEQDSTLALAYWQRATCLLASKEHATPAKTNGLF 559
Query: 534 -KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
KK + +AI LD L Y ++ A+ C L + R ++AY+ RG
Sbjct: 560 IKKVADDLKRAIALDTGNPYLIYDLGNVYALQSDYTNAIICYGSALKYNSRIAEAYYNRG 619
Query: 593 LLLHGLGQHKKAIKDLSSG--LGI 614
+ L Q A+KDL + LG+
Sbjct: 620 IAKMALQQQSDALKDLGTAGELGL 643
>gi|299140627|ref|ZP_07033765.1| TPR domain-containing protein [Prevotella oris C735]
gi|298577593|gb|EFI49461.1| TPR domain-containing protein [Prevotella oris C735]
Length = 657
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 6/256 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ G Y A F+Q +K +P E R R R AI D+ AI +P
Sbjct: 65 RGIAKQRLGDYTGAEEDFNQAVKLNPYVHELFRERANNRIVLRSYVDAIRDYDRAIALDP 124
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEP---NSADILHERGIVNFKFKDFNAAV 503
E W R +R E + DL L+ P N+ ++ E + D A
Sbjct: 125 DNKEYWFNRALSRYYQHEVQQTRHDLQYILKRWPALPNTYALMTETYL---NANDTLQAR 181
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ V+++ + ++++ LG ++KA++A KAI N + + + +
Sbjct: 182 QWAEKTVRVNPYDGNSWSILGRLYLRQSNWRKADQAFGKAIHYTPNVVNNYTYRAMCRVN 241
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L +A+E + + +D A++ RGLL +G AIKD S L ++P+N++ LY
Sbjct: 242 LNKLRQAMEDFNKAIEMDPNSFLAHYNRGLLGLTVGDDNNAIKDFSYVLRLEPNNLQALY 301
Query: 624 LRASCYHAIGEYREAV 639
RA +G+YR A+
Sbjct: 302 NRALLLDRVGDYRGAI 317
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
+++GR R Q A F +AI P+ + R R L + +A++D +KA+
Sbjct: 199 SILGRLYLR--QSNWRKADQAFGKAIHYTPNVVNNYTYRAMCRVNLNKLRQAMEDFNKAI 256
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E +PNS + RG++ D N A++D S ++L+ N A L L +G+Y+ A
Sbjct: 257 EMDPNSFLAHYNRGLLGLTVGDDNNAIKDFSYVLRLEPNNLQALYNRALLLDRVGDYRGA 316
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+ + I NF + Y+ L + KA
Sbjct: 317 ISDYSRVISKFPNFWSGLLSRAKCYRHLGLTAKA 350
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 405 DQILKEDPMYPEALIGRGTARAFQR----ELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
DQ + Y ++ T RA R +L A+ DF +AI+ +P++ A RG
Sbjct: 215 DQAFGKAIHYTPNVVNNYTYRAMCRVNLNKLRQAMEDFNKAIEMDPNSFLAHYNRGLLGL 274
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
+G+ AI+D S L EPN+ L+ R ++ + D+ A+ D S +
Sbjct: 275 TVGDDNNAIKDFSYVLRLEPNNLQALYNRALLLDRVGDYRGAISDYSRVI 324
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 88/213 (41%), Gaps = 4/213 (1%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
R+ I I + P AW RG A+ LG+ A +D ++A++ P ++ E
Sbjct: 39 RDYVVVIQHCNNIISNRPYLYRAWFYRGIAKQRLGDYTGAEEDFNQAVKLNPYVHELFRE 98
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R + + A+ D + LD +NK + ALS +++ + H L R
Sbjct: 99 RANNRIVLRSYVDAIRDYDRAIALDPDNKE--YWFNRALSRYYQHEVQQTRHDLQYILKR 156
Query: 549 --NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ +T+ Y + ++ +A + ++ + ++ ++ + G L +KA +
Sbjct: 157 WPALPNTYALMTETYLNANDTLQARQWAEKTVRVNPYDGNSWSILGRLYLRQSNWRKADQ 216
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ P+ + RA C + + R+A+
Sbjct: 217 AFGKAIHYTPNVVNNYTYRAMCRVNLNKLRQAM 249
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 19/147 (12%)
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY---------- 533
D+L +R + ++ AA+ DL+AC++ D AY L + E+
Sbjct: 500 DLLLQRAVAYTTTYNYEAALNDLNACIEQDSTLTLAYWQRAACLLASKEHATPAKTNGLF 559
Query: 534 -KKAEEAHLKAIQLDRN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
KK + +AI LD L G++ D N A+ C L + R ++AY+
Sbjct: 560 IKKVADDLKRAIALDAGNPYLLYDLGNVYVLQNDYTN---AITCYGSALKYNSRIAEAYY 616
Query: 590 LRGLLLHGLGQHKKAIKDLSSG--LGI 614
RG+ L Q A+KDL + LG+
Sbjct: 617 NRGIAKMALQQQSDALKDLGTAGELGL 643
>gi|218247323|ref|YP_002372694.1| hypothetical protein PCC8801_2530 [Cyanothece sp. PCC 8801]
gi|218167801|gb|ACK66538.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
Length = 260
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ G Y AI+ F Q ++ P P++ RG A +++ A++D+ AIQ N
Sbjct: 39 NQGVDKIGAGNYQGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQLN 98
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ R A + + +A+ D S+A++ PN AD RG + AA+ D
Sbjct: 99 PQFAYAYGNRCYAFYQMKDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAIAD 158
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
+ ++L+ AY LA + +A + K++QLD NF +A+ + +TQF
Sbjct: 159 YTEAIRLNSNYAKAYYNRALAYNRAQLLPEAIADYTKSVQLDPNFADAYYNRGITQF--K 216
Query: 564 LANSEKALECLQQ 576
L N +A+ LQ+
Sbjct: 217 LGNESEAIADLQK 229
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 90/177 (50%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+DFT+AIQ P +++ RG A +G+ +A+ D + A++ P A R
Sbjct: 51 QGAIADFTQAIQLAPQDPDSYYNRGYAYHIIGKIDQALADYNLAIQLNPQFAYAYGNRCY 110
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ KD+ A+ D S +KL+ Y Y G A +G ++ A + +AI+L+ N+
Sbjct: 111 AFYQMKDYQKALSDCSEAIKLNPNYADFYIYRGNAQDDLGNHQAAIADYTEAIRLNSNYA 170
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+A+ + Y +A+ + + +D F+ AY+ RG+ LG +AI DL
Sbjct: 171 KAYYNRALAYNRAQLLPEAIADYTKSVQLDPNFADAYYNRGITQFKLGNESEAIADL 227
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A GK A++ ++ ++ +P + A R A ++ + A+SD +EA
Sbjct: 69 DSYYNRGYAYHIIGKIDQALADYNLAIQLNPQFAYAYGNRCYAFYQMKDYQKALSDCSEA 128
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ NP+ + + RG A+ LG AI D ++A+ N A + R + + +
Sbjct: 129 IKLNPNYADFYIYRGNAQDDLGNHQAAIADYTEAIRLNSNYAKAYYNRALAYNRAQLLPE 188
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D + V+LD AY G+ +G +A KA QL + G+ T
Sbjct: 189 AIADYTKSVQLDPNFADAYYNRGITQFKLGNESEAIADLQKASQL----FKTQGNTTY-- 242
Query: 562 QDLANSEKALECLQQV 577
S+KA + LQ++
Sbjct: 243 -----SQKANDTLQKL 253
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ ++++AIR L+S A++Y NRA Y++ +L I D K++QLDP AY
Sbjct: 154 AAIADYTEAIR-LNSNYAKAY-----YNRALAYNRAQLLPEAIADYTKSVQLDPNFADAY 207
Query: 107 ILKGCAFSALGRKEEALSVWEKG 129
+G LG + EA++ +K
Sbjct: 208 YNRGITQFKLGNESEAIADLQKA 230
>gi|153874908|ref|ZP_02002939.1| O-linked N-acetylglucosamine transferase [Beggiatoa sp. PS]
gi|152068628|gb|EDN67061.1| O-linked N-acetylglucosamine transferase [Beggiatoa sp. PS]
Length = 240
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALE-----------FEPNS--ADILHERGIVNFKF 496
+ W +RG A L EA++ KAL+ ++ NS A RGI
Sbjct: 8 QTWIKRGIALHNLNHYQEAVESYDKALQIPDDDALSGYRYKRNSDKAWAWANRGIALSDL 67
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
K + A+E ++++ ++ A+ G AL +G Y++A E+ KAIQ++ ++ EAW
Sbjct: 68 KRYEQAIESYDKALQINPDDDEAWNNRGFALGKLGSYQEALESFDKAIQINPDYDEAWAF 127
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+L ++ +E + L I+ + + ++ RGL+L LG HK+AI+ + L I P
Sbjct: 128 YGATLNELGFHKEVIEKYDKALQINPNYYEVWYCRGLVLFTLGCHKEAIESYNKALQIKP 187
Query: 617 SNIECLYLRASCYHAIGEYREAV 639
E Y R + + Y+EA+
Sbjct: 188 DYHEAWYNRGLALYYLKRYQEAI 210
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA + +Y AI +D+ L+ +P EA RG A + A+ F +AIQ N
Sbjct: 59 NRGIALSDLKRYEQAIESYDKALQINPDDDEAWNNRGFALGKLGSYQEALESFDKAIQIN 118
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW G LG E I+ KAL+ PN ++ + RG+V F A+E
Sbjct: 119 PDYDEAWAFYGATLNELGFHKEVIEKYDKALQINPNYYEVWYCRGLVLFTLGCHKEAIES 178
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +++ + A+ GLAL + Y++A +++ KA+Q+
Sbjct: 179 YNKALQIKPDYHEAWYNRGLALYYLKRYQEAIDSYDKALQI 219
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 23/240 (9%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RGIA N Y A+ +D +A Q + A+S + +
Sbjct: 11 IKRGIALHNLNHYQEAVESYD-------------------KALQIPDDDALSGYR--YKR 49
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N AW RG A + L +AI+ KAL+ P+ + + RG K + A+E
Sbjct: 50 NSDKAWAWANRGIALSDLKRYEQAIESYDKALQINPDDDEAWNNRGFALGKLGSYQEALE 109
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ + A+ + G L+ +G +K+ E + KA+Q++ N+ E W L
Sbjct: 110 SFDKAIQINPDYDEAWAFYGATLNELGFHKEVIEKYDKALQINPNYYEVWYCRGLVLFTL 169
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+E + L I + +A++ RGL L+ L ++++AI L I P E LYL
Sbjct: 170 GCHKEAIESYNKALQIKPDYHEAWYNRGLALYYLKRYQEAIDSYDKALQIRPD--EQLYL 227
>gi|294853920|ref|ZP_06794592.1| hypothetical protein BAZG_02903 [Brucella sp. NVSL 07-0026]
gi|294819575|gb|EFG36575.1| hypothetical protein BAZG_02903 [Brucella sp. NVSL 07-0026]
Length = 315
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 106 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 165
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 166 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 224
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+ +
Sbjct: 225 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNS 284
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 285 DKAKAANSYARAVQLDPKYKPA 306
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 34/204 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 86 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 145
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 146 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 181
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S + +
Sbjct: 182 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 231
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
+ + E R Y A+G+Y A
Sbjct: 232 NSTAPEPYNGRGISYVALGDYDNA 255
>gi|261216409|ref|ZP_05930690.1| TPR repeat-containing protein [Brucella abortus bv. 3 str. Tulya]
gi|260918016|gb|EEX84877.1| TPR repeat-containing protein [Brucella abortus bv. 3 str. Tulya]
Length = 295
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 86 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAMQDYSRAIQLNP 145
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 146 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 204
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 264
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 265 DKAKAANSYARAVQLDPKYKPA 286
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 84/204 (41%), Gaps = 34/204 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N A++D S ++L+ + +AY G N
Sbjct: 126 YMGDNNKAMQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 161
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S + +
Sbjct: 162 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 211
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
+ + E R Y A+G+Y A
Sbjct: 212 NSTAPEPYNGRGISYVALGDYDNA 235
>gi|237816772|ref|ZP_04595764.1| TPR domain-containing protein [Brucella abortus str. 2308 A]
gi|376270821|ref|YP_005113866.1| hypothetical protein BAA13334_II00651 [Brucella abortus A13334]
gi|376277527|ref|YP_005153588.1| hypothetical protein BCA52141_II1638 [Brucella canis HSK A52141]
gi|384213475|ref|YP_005602558.1| hypothetical protein BM590_B0937 [Brucella melitensis M5-90]
gi|384410576|ref|YP_005599196.1| hypothetical protein BM28_B0938 [Brucella melitensis M28]
gi|384447076|ref|YP_005661294.1| hypothetical protein [Brucella melitensis NI]
gi|237787585|gb|EEP61801.1| TPR domain-containing protein [Brucella abortus str. 2308 A]
gi|326411123|gb|ADZ68187.1| TPR repeat-containing protein [Brucella melitensis M28]
gi|326554415|gb|ADZ89054.1| TPR repeat-containing protein [Brucella melitensis M5-90]
gi|349745073|gb|AEQ10615.1| TPR repeat-containing protein [Brucella melitensis NI]
gi|363401993|gb|AEW18962.1| TPR repeat-containing protein [Brucella abortus A13334]
gi|363405901|gb|AEW16195.1| TPR repeat-containing protein [Brucella canis HSK A52141]
Length = 315
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 106 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 165
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 166 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 224
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 225 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 284
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 285 DKAKAANSYARAVQLDPKYKPA 306
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 34/204 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 86 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 145
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 146 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 181
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S + +
Sbjct: 182 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 231
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
+ + E R Y A+G+Y A
Sbjct: 232 NSTAPEPYNGRGISYVALGDYDNA 255
>gi|296447504|ref|ZP_06889427.1| peptidase C14 caspase catalytic subunit p20 [Methylosinus
trichosporium OB3b]
gi|296254971|gb|EFH02075.1| peptidase C14 caspase catalytic subunit p20 [Methylosinus
trichosporium OB3b]
Length = 677
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 44/276 (15%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R ++++ +V+ RG Q+++ +Y +AI F++ L D Y +A + RG A F+R+
Sbjct: 132 RGEQNRAQAVELYNLRGATQIDKDEYDTAIGDFNKALAIDRNYVDAYVNRGHAYTFKRDF 191
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+DF +A++ P R A G + A+ + KA
Sbjct: 192 DKAIADFDQAVRLKP------------RDAFGYAARAMARMGKA---------------- 223
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
DF AV D +KLD +N YT G A G+ + + + H KA+ L +
Sbjct: 224 ------DFTGAVADYDRAIKLDPQNAKLYTSRGEAWRLQGDLESSLQDHDKALSL-KPSE 276
Query: 552 EAWGHLTQFYQDLANSEKAL--------ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
E + + +D+A K + +C + +L ++ F+ Y RGL+ G +
Sbjct: 277 EVYNNRALTLKDIALKSKDVTKLDEARNDCSEAIL-LNPSFAVPYTNRGLIRRLAGDLRG 335
Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ DL +G+ ++E L R Y AIG+ A+
Sbjct: 336 SLLDLDKAIGLAQRSMEALTFRGDTYRAIGDLDRAL 371
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 17/220 (7%)
Query: 429 RELEAAISDFTEAIQSN----PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
R +AAI T + S A EA+ +RG A+A +G+ A++DL+ AL+ P
Sbjct: 42 RNPDAAIPACTRLLVSGKLTEAEAAEAYGQRGIAKAGMGDLDGALKDLTAALDRNPKMLV 101
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVK--LDKENKSA-----YTYLGLALSSIGEYKKAE 537
L RG + + A+ D S ++ L E A Y G EY A
Sbjct: 102 ALKLRGKAYKELNHLDLAIADFSRALRDALRGEQNRAQAVELYNLRGATQIDKDEYDTAI 161
Query: 538 EAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
KA+ +DRN+++A+ GH F +D +KA+ Q + + R + Y R +
Sbjct: 162 GDFNKALAIDRNYVDAYVNRGHAYTFKRDF---DKAIADFDQAVRLKPRDAFGYAARAMA 218
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
G A+ D + +DP N + R + G+
Sbjct: 219 RMGKADFTGAVADYDRAIKLDPQNAKLYTSRGEAWRLQGD 258
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 80/201 (39%), Gaps = 40/201 (19%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF------- 438
+R +A++ + + A++ +D+ +K DP + RG A Q +LE+++ D
Sbjct: 214 ARAMARMGKADFTGAVADYDRAIKLDPQNAKLYTSRGEAWRLQGDLESSLQDHDKALSLK 273
Query: 439 ---------------------------------TEAIQSNPSAGEAWKRRGQARAALGES 465
+EAI NPS + RG R G+
Sbjct: 274 PSEEVYNNRALTLKDIALKSKDVTKLDEARNDCSEAILLNPSFAVPYTNRGLIRRLAGDL 333
Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
++ DL KA+ S + L RG D + A++D +++ + +A+ G
Sbjct: 334 RGSLLDLDKAIGLAQRSMEALTFRGDTYRAIGDLDRALQDYDEAIRIFPDYVAAHNGRGA 393
Query: 526 ALSSIGEYKKAEEAHLKAIQL 546
AL G+ A+ + KA+ L
Sbjct: 394 ALQKKGDLAGAKAEYEKALSL 414
>gi|428299394|ref|YP_007137700.1| hypothetical protein Cal6303_2758 [Calothrix sp. PCC 6303]
gi|428235938|gb|AFZ01728.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 1787
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%)
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y I RG ++ E A D +AI+ P+ + RG + E+ +A D
Sbjct: 677 YAIGYILRGAIYWKLKDYEKAFDDIKKAIELKPNNPNYYFIRGSSYLERKENQKAFADFK 736
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
KA+ +P++A++ R I + KD A+ D ++L+ +N Y A + +
Sbjct: 737 KAITLQPSNAELYINRAIAYQEVKDTERAMADYKKAIELEPKNPERYITRAEAYQELKDT 796
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
++A + KAI+LD N E + + YQDL +EKA+ ++ + I+ Y RG
Sbjct: 797 ERAMADYKKAIELDPNNPERYITRARAYQDLEENEKAMADYKKAIQIEPHDPWNYIWRGY 856
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
G+ +++ A+ D + + IDP N + R S Y
Sbjct: 857 AYQGMFRYQDALDDFNKAIEIDPKNPDLYNTRCSAYQ 893
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 126/267 (47%), Gaps = 10/267 (3%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+ + ++R IA A++ + + ++ +P PE I R A ++ E A++D+
Sbjct: 745 NAELYINRAIAYQEVKDTERAMADYKKAIELEPKNPERYITRAEAYQELKDTERAMADYK 804
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN---FKF 496
+AI+ +P+ E + R +A L E+ +A+ D KA++ EP+ RG F++
Sbjct: 805 KAIELDPNNPERYITRARAYQDLEENEKAMADYKKAIQIEPHDPWNYIWRGYAYQGMFRY 864
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+D A++D + +++D +N Y A E +KA KAI+LD + + + +
Sbjct: 865 QD---ALDDFNKAIEIDPKNPDLYNTRCSAYQEDDE-QKAISDCTKAIELDSDNPKRYLN 920
Query: 557 LTQFYQDLANSE---KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ Y N + K L + + +D + Y +R + + AI D + +
Sbjct: 921 RAEVYFKSKNYQLKSKGFADLNKAIEVDPKNPNLYMIRSRVYMNFFDYPNAINDATKAID 980
Query: 614 IDPSNIECLYLRASCYHAIGEYREAVI 640
I PS +C + RA Y + EY +A++
Sbjct: 981 IIPSCFDCYFWRAFSYRQMKEYEKALV 1007
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 4/219 (1%)
Query: 425 RAF----QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RAF +E E A+ D+ + I+ P ++ R + L + +A D K +E EP
Sbjct: 992 RAFSYRQMKEYEKALVDYNKIIEIEPIDPYSYNVRAEFFLELKDYKKAFADYQKMIELEP 1051
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+++ ER + KD+ A D + +++D +N Y ++ +Y+ A +
Sbjct: 1052 NNSENYLERAEAYWTLKDYQNAFADYTKAIEVDSKNPERYLKRAEVYWTLKDYQNAFADY 1111
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI++D E + + Y L + + A + + +D + + + R L
Sbjct: 1112 TKAIEVDSKNPERYLKRAEAYWTLKDYQNAFADYTKAIEVDPKNPELHLKRAEAYWTLKD 1171
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ A D + + +DP N E RA Y + +Y + +
Sbjct: 1172 YQNAFADYTKAIEVDPKNPERYRKRAKAYLEVKDYNKVI 1210
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 130/306 (42%), Gaps = 51/306 (16%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ G + GK +++ +Q + +P +A RG+ +FQ + + A+++F +A +
Sbjct: 536 LNYGNQLLRSGKIEDSLTPLNQAINLNPKLYQAYYLRGSILSFQGKSKEALAEFNKATEL 595
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALE------------------FEPNSADIL 486
P+ +AW+ + L + EA++ + KA+E F P IL
Sbjct: 596 KPNFTQAWRIKSSLLFNLKKYPEALKAIDKAIEIQSKSKSDPVGKIKSSFTFYPLRIAIL 655
Query: 487 HE--------------------------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
E RG + +K KD+ A +D+ ++L N + Y
Sbjct: 656 IELERYQEALDESKKFIDTSSYAIGYILRGAIYWKLKDYEKAFDDIKKAIELKPNNPNYY 715
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G + E +KA KAI L + E + + YQ++ ++E+A+ ++ + +
Sbjct: 716 FIRGSSYLERKENQKAFADFKKAITLQPSNAELYINRAIAYQEVKDTERAMADYKKAIEL 775
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH-------AIG 633
+ + + Y R L ++A+ D + +DP+N E RA Y A+
Sbjct: 776 EPKNPERYITRAEAYQELKDTERAMADYKKAIELDPNNPERYITRARAYQDLEENEKAMA 835
Query: 634 EYREAV 639
+Y++A+
Sbjct: 836 DYKKAI 841
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 8/238 (3%)
Query: 404 FDQILKE---DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
FD I K P P RG++ ++E + A +DF +AI PS E + R A
Sbjct: 698 FDDIKKAIELKPNNPNYYFIRGSSYLERKENQKAFADFKKAITLQPSNAELYINRAIAYQ 757
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ ++ A+ D KA+E EP + + R + KD A+ D ++LD N Y
Sbjct: 758 EVKDTERAMADYKKAIELEPKNPERYITRAEAYQELKDTERAMADYKKAIELDPNNPERY 817
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALECLQQVL 578
A + E +KA + KAIQ++ + + W ++ + YQ + + AL+ + +
Sbjct: 818 ITRARAYQDLEENEKAMADYKKAIQIEPH--DPWNYIWRGYAYQGMFRYQDALDDFNKAI 875
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
ID + Y+ R + +KAI D + + +D N + RA Y Y+
Sbjct: 876 EIDPKNPDLYNTR-CSAYQEDDEQKAISDCTKAIELDSDNPKRYLNRAEVYFKSKNYQ 932
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 120/280 (42%), Gaps = 41/280 (14%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I VD + L R Y +A + + + ++ D PE + R A ++
Sbjct: 1078 TKAIEVDSKNPERYLKRAEVYWTLKDYQNAFADYTKAIEVDSKNPERYLKRAEAYWTLKD 1137
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A +D+T+AI+ +P E +R +A L + A D +KA+E +P + + +R
Sbjct: 1138 YQNAFADYTKAIEVDPKNPELHLKRAEAYWTLKDYQNAFADYTKAIEVDPKNPERYRKRA 1197
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL----------------GLALSSIGEYK 534
+ KD+N + D + + + +N + YT L G S + +Y+
Sbjct: 1198 KAYLEVKDYNKVITDYTKAINIISDNPTYYTDLKVLNNISDSPTYYIERGDVYSELKDYQ 1257
Query: 535 KAEEAHLKAIQLDRNFL------EAW-GHLTQFYQ-------------DLANSEKALECL 574
A ++KAI++ N +AW H T+ Y+ + + +KA+ L
Sbjct: 1258 NALADYIKAIEIYDNLPALPNSQQAWLMHSTKKYKYEETRLKIVKTSLNYKDYQKAIVNL 1317
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+++ + Y RG L +K AI DL+ + I
Sbjct: 1318 TKIIQQNPNVFDLYFHRGSASLELKDNKNAIADLTKAIEI 1357
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG L + +A D+ KA+E +PN+ + RG + K+ A D + L
Sbjct: 684 RGAIYWKLKDYEKAFDDIKKAIELKPNNPNYYFIRGSSYLERKENQKAFADFKKAITLQP 743
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N Y +A + + ++A + KAI+L+ E + + YQ+L ++E+A+
Sbjct: 744 SNAELYINRAIAYQEVKDTERAMADYKKAIELEPKNPERYITRAEAYQELKDTERAMADY 803
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++ + +D + Y R L +++KA+ D + I+P + R Y +
Sbjct: 804 KKAIELDPNNPERYITRARAYQDLEENEKAMADYKKAIQIEPHDPWNYIWRGYAYQGMFR 863
Query: 635 YREAV 639
Y++A+
Sbjct: 864 YQDAL 868
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 98/218 (44%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A+ +++I++ +P+ P + R ++ + A +D+ + I+ P+ E + R
Sbjct: 1002 YEKALVDYNKIIEIEPIDPYSYNVRAEFFLELKDYKKAFADYQKMIELEPNNSENYLERA 1061
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+A L + A D +KA+E + + + +R V + KD+ A D + +++D +N
Sbjct: 1062 EAYWTLKDYQNAFADYTKAIEVDSKNPERYLKRAEVYWTLKDYQNAFADYTKAIEVDSKN 1121
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
Y A ++ +Y+ A + KAI++D E + Y L + + A +
Sbjct: 1122 PERYLKRAEAYWTLKDYQNAFADYTKAIEVDPKNPELHLKRAEAYWTLKDYQNAFADYTK 1181
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ +D + + Y R + + K I D + + I
Sbjct: 1182 AIEVDPKNPERYRKRAKAYLEVKDYNKVITDYTKAINI 1219
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A I + A ++ + AI + T+ I P+ + RG A ++I D +KAL
Sbjct: 1669 AYIKQAEAYLGIKDYQNAIDNHTKVINLQPNNPIFYNSRGLAYFRSQNYQQSILDYNKAL 1728
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK--LDKENKSAY 520
E +P+ AD + RG+ + KD+ A+ D+ V+ L ++N+ Y
Sbjct: 1729 ELQPDYADSYYNRGLAYKELKDYQKAITDIQKAVQIYLQQDNQEGY 1774
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 45/257 (17%)
Query: 385 LSRGIAQVNEGKYASAISIFD---QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++RG+A N+ Y AI F+ +ILK + R+ Q E + E
Sbjct: 1386 VNRGLAYKNQQDYLKAIKDFNKAAEILKYN-------------RSNQEEYKRVQKYLIEL 1432
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
NP E + + +A G+ + + +KA+E P ++ R V F K++
Sbjct: 1433 ASKNP---EPYLTKVEASQRSGDYKNMLANYTKAIEIAPQESEFYMGRANVYFLLKNYRK 1489
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A D + + D E Y A + + +KA + KAI++ + + ++ FY
Sbjct: 1490 AFVDYNKAIAFDSEKSWYYIERAEAYLKVKDNEKAFVDYNKAIEIYTKNIAKFSSISSFY 1549
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
YID+ +KAY + ++KA D + + ++P +
Sbjct: 1550 -----------------YIDR--AKAY-------LKVKNYEKAFADYNKAIALEPDDDNN 1583
Query: 622 LYLRASCYHAIGEYREA 638
RA Y I +Y +A
Sbjct: 1584 YIARAKAYLEIKDYEKA 1600
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 37/217 (17%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + AI + T+ IQ NP+ + + RG A L ++ AI DL+KA+E + E
Sbjct: 1308 KDYQKAIVNLTKIIQQNPNVFDLYFHRGSASLELKDNKNAIADLTKAIEI------MEKE 1361
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA---IQ 545
+ I +F K DL CVK S Y GLA + +Y KA + KA ++
Sbjct: 1362 KNISSFAVK---CTFSDL-LCVK----EWSLYVNRGLAYKNQQDYLKAIKDFNKAAEILK 1413
Query: 546 LDRNFLEAWGHLTQFYQDLA--NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
+R+ E + + ++ +LA N E L ++ G +K
Sbjct: 1414 YNRSNQEEYKRVQKYLIELASKNPEPYLTKVEAS------------------QRSGDYKN 1455
Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ + + + I P E RA+ Y + YR+A +
Sbjct: 1456 MLANYTKAIEIAPQESEFYMGRANVYFLLKNYRKAFV 1492
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 16/225 (7%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
E KR +K+ + SK+ + L++ A G Y + ++ + + ++ P E +G
Sbjct: 1421 EYKRVQKYLIELASKNP----EPYLTKVEASQRSGDYKNMLANYTKAIEIAPQESEFYMG 1476
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE--- 477
R + A D+ +AI + + R +A + ++ +A D +KA+E
Sbjct: 1477 RANVYFLLKNYRKAFVDYNKAIAFDSEKSWYYIERAEAYLKVKDNEKAFVDYNKAIEIYT 1536
Query: 478 -----FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
F S+ +R K K++ A D + + L+ ++ + Y A I +
Sbjct: 1537 KNIAKFSSISSFYYIDRAKAYLKVKNYEKAFADYNKAIALEPDDDNNYIARAKAYLEIKD 1596
Query: 533 YKKAEEAHLKAIQLDRNFL----EAWGHLTQFYQDLANSEKALEC 573
Y+KA + KAI D + E + + Y LA +E LE
Sbjct: 1597 YEKAFADYNKAIADDNKAIAIQPEPYAIQLELYNYLARAEAYLEI 1641
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 87/226 (38%), Gaps = 42/226 (18%)
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA-------RAALGESVEAIQD 471
I R A + E A +D+ +AI P + R +A A + +AI D
Sbjct: 1551 IDRAKAYLKVKNYEKAFADYNKAIALEPDDDNNYIARAKAYLEIKDYEKAFADYNKAIAD 1610
Query: 472 LSKALEFEPNSADILHE------RGIVNFKFKDFNAAVED----------LSACVKLDKE 515
+KA+ +P I E R + K++ A D +K+
Sbjct: 1611 DNKAIAIQPEPYAIQLELYNYLARAEAYLEIKNYEKAFADYNKANLEGNHFPYFIKITAY 1670
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLE----AWGHLTQFYQDLANSE 568
K A YLG I +Y+ A + H K I L N F A+ + Q + +
Sbjct: 1671 IKQAEAYLG-----IKDYQNAIDNHTKVINLQPNNPIFYNSRGLAYFRSQNYQQSILDYN 1725
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
KALE + ++ +Y+ RGL L ++KAI D+ + I
Sbjct: 1726 KALE-------LQPDYADSYYNRGLAYKELKDYQKAITDIQKAVQI 1764
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 100/228 (43%), Gaps = 22/228 (9%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
I+K SIS + + R A + Y A + +++ + +P I R A ++ E
Sbjct: 1539 IAKFSSISSFYYIDRAKAYLKVKNYEKAFADYNKAIALEPDDDNNYIARAKAYLEIKDYE 1598
Query: 433 AAISDFTEAI---------QSNPSAGEA----WKRRGQARAALGESVEAIQDLSKA-LE- 477
A +D+ +AI Q P A + + R +A + +A D +KA LE
Sbjct: 1599 KAFADYNKAIADDNKAIAIQPEPYAIQLELYNYLARAEAYLEIKNYEKAFADYNKANLEG 1658
Query: 478 -----FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
F +A I + K D+ A+++ + + L N Y GLA
Sbjct: 1659 NHFPYFIKITAYIKQAEAYLGIK--DYQNAIDNHTKVINLQPNNPIFYNSRGLAYFRSQN 1716
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
Y+++ + KA++L ++ +++ + Y++L + +KA+ +Q+ + I
Sbjct: 1717 YQQSILDYNKALELQPDYADSYYNRGLAYKELKDYQKAITDIQKAVQI 1764
>gi|422302483|ref|ZP_16389846.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9806]
gi|389788307|emb|CCI16150.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9806]
Length = 707
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 125/246 (50%), Gaps = 3/246 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNP-SAGEAWK 453
+Y A++ + Q LK +P Y EAL G+ A A QR E A++ + +AIQ NP SA AW
Sbjct: 347 RYTDALNSYGQALKINPDYLEALQGKADALLALQRYSE-ALNTYEKAIQINPDSAWAAWL 405
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG+A LG++ EA+ + L F P ++ + + + + ++AA + L +
Sbjct: 406 GRGEALDKLGKNQEALASFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQ 465
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ + + G +L ++ +Y+ A +A+ +A+ ++ + W + L ALE
Sbjct: 466 QNDAKIWYKKGWSLQNLEDYEGAVKAYEQALAIEPDNALIWYQKGNSFYQLNKINDALES 525
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + +FS+A++ +G++L LG+ +A++ + + + + + + H +
Sbjct: 526 YSKAGQFNPQFSQAHYSQGIILQKLGRKSEALQAFTQATEANSNYYQAWLNQGALLHQME 585
Query: 634 EYREAV 639
++EA+
Sbjct: 586 RFQEAI 591
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
Query: 396 KYASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P A +GRG A + + A++ F + NP+A +AW+
Sbjct: 381 RYSEALNTYEKAIQINPDSAWAAWLGRGEALDKLGKNQEALASFDRVLSFNPAASQAWQG 440
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 441 KADIYLELQQYSAAQKALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYEQALAIEP 500
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
+N + G + + + A E++ KA Q + F +A H +Q Q L +AL+
Sbjct: 501 DNALIWYQKGNSFYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLGRKSEALQ 558
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
Q + + +A+ +G LLH + + ++AI I E + ++ +
Sbjct: 559 AFTQATEANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRL 618
Query: 633 GEYREAV 639
G+Y +A+
Sbjct: 619 GDYPQAI 625
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 115/256 (44%), Gaps = 2/256 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A++ FD++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGEALDKLGKNQEALASFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL EP++A I +++G ++ N A+E
Sbjct: 465 QQNDAKIWYKKGWSLQNLEDYEGAVKAYEQALAIEPDNALIWYQKGNSFYQLNKINDALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
S + + + A+ G+ L +G +A +A +A + + N+ +AW + +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRKSEALQAFTQATEANSNYYQAWLNQGALLHQM 584
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY- 623
++A+ ++ I + ++ + G + LG + +AI + N E
Sbjct: 585 ERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYPQAINAYQQAIQRQKDNPETWKS 644
Query: 624 LRASCYHAIGEYREAV 639
L SC+ +G+Y A+
Sbjct: 645 LGNSCFK-LGQYERAI 659
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 4/194 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQS 444
+G + N Y A+ ++Q L +P ALI +F + ++ A+ +++A Q
Sbjct: 475 KGWSLQNLEDYEGAVKAYEQALAIEP--DNALIWYQKGNSFYQLNKINDALESYSKAGQF 532
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP +A +G LG EA+Q ++A E N +G + + + F A+
Sbjct: 533 NPQFSQAHYSQGIILQKLGRKSEALQAFTQATEANSNYYQAWLNQGALLHQMERFQEAIA 592
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++ + + +G A +G+Y +A A+ +AIQ ++ E W L L
Sbjct: 593 SYEKARRISSQKAEVFIGIGNAWYRLGDYPQAINAYQQAIQRQKDNPETWKSLGNSCFKL 652
Query: 565 ANSEKALECLQQVL 578
E+A++ Q+ L
Sbjct: 653 GQYERAIQAYQESL 666
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 55/116 (47%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G + EAI KA A++ G
Sbjct: 556 ALQAFTQATEANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAW 615
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D+ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 616 YRLGDYPQAINAYQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSN 671
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ +++ + F T+ +++
Sbjct: 516 LNKINDALESYSKAGQFNPQFSQAHYSQGII------LQKLGRKSEALQAF--TQATEAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI+
Sbjct: 568 SNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYPQAINA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACVKLDKENK 517
+ ++++ + K+D E +
Sbjct: 688 ELQQSLQNQTP--KVDSEEQ 705
>gi|425447841|ref|ZP_18827823.1| putative Calcium/calmodulin-dependent protein kinase [Microcystis
aeruginosa PCC 9443]
gi|389731517|emb|CCI04438.1| putative Calcium/calmodulin-dependent protein kinase [Microcystis
aeruginosa PCC 9443]
Length = 571
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 97/188 (51%)
Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
+ N G AI+ +Q +K + A G A+ + + AI+DF +AIQ NP
Sbjct: 356 MGNYNLGDNQGAIADQNQAIKLNSDDAVAYYNNGVAKYKLGDNQGAITDFNQAIQINPDY 415
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
A+ RG A++ LG+ AI+D ++A++ P+ AD + RG + D A+ D +
Sbjct: 416 ANAYYDRGSAKSNLGDKQGAIKDYNQAIQINPDDADFYNNRGWAKYNLGDKQGAIADYNQ 475
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+KL+ + Y G A ++G+ + A + +AI+L+ +F + + Y+ L ++E
Sbjct: 476 AIKLNPDFAFPYNNRGWAKYNLGDKQGAIADYNQAIKLNSDFAVPYYNRGLIYKKLNDNE 535
Query: 569 KALECLQQ 576
KA++ +Q
Sbjct: 536 KAIKDFRQ 543
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A+ G AI+ F+Q ++ +P Y A RG+A++ + + AI D+ +AIQ NP
Sbjct: 389 GVAKYKLGDNQGAITDFNQAIQINPDYANAYYDRGSAKSNLGDKQGAIKDYNQAIQINPD 448
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + RG A+ LG+ AI D ++A++ P+ A + RG + D A+ D +
Sbjct: 449 DADFYNNRGWAKYNLGDKQGAIADYNQAIKLNPDFAFPYNNRGWAKYNLGDKQGAIADYN 508
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+KL+ + Y GL + + +KA + +A +L R
Sbjct: 509 QAIKLNSDFAVPYYNRGLIYKKLNDNEKAIKDFRQAAKLHR 549
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+T +++ I+ D+ RG A+ N G AI ++Q ++ +P + RG A+
Sbjct: 401 AITDFNQAIQINPDYANAYYDRGSAKSNLGDKQGAIKDYNQAIQINPDDADFYNNRGWAK 460
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AI+D+ +AI+ NP + RG A+ LG+ AI D ++A++ + A
Sbjct: 461 YNLGDKQGAIADYNQAIKLNPDFAFPYNNRGWAKYNLGDKQGAIADYNQAIKLNSDFAVP 520
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
+ RG++ K D A++D KL ++ + Y
Sbjct: 521 YYNRGLIYKKLNDNEKAIKDFRQAAKLHRQQNNQTWY 557
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 88/178 (49%)
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG++ AI D ++A++ + A + G+ +K D A+ D + ++++ + +AY
Sbjct: 361 LGDNQGAIADQNQAIKLNSDDAVAYYNNGVAKYKLGDNQGAITDFNQAIQINPDYANAYY 420
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
G A S++G+ + A + + +AIQ++ + + + + +L + + A+ Q + ++
Sbjct: 421 DRGSAKSNLGDKQGAIKDYNQAIQINPDDADFYNNRGWAKYNLGDKQGAIADYNQAIKLN 480
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
F+ Y+ RG + LG + AI D + + ++ Y R Y + + +A+
Sbjct: 481 PDFAFPYNNRGWAKYNLGDKQGAIADYNQAIKLNSDFAVPYYNRGLIYKKLNDNEKAI 538
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 61/124 (49%)
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
N+ D A+ D + +KL+ ++ AY G+A +G+ + A +AIQ++ ++
Sbjct: 358 NYNLGDNQGAIADQNQAIKLNSDDAVAYYNNGVAKYKLGDNQGAITDFNQAIQINPDYAN 417
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
A+ +L + + A++ Q + I+ + Y+ RG + LG + AI D + +
Sbjct: 418 AYYDRGSAKSNLGDKQGAIKDYNQAIQINPDDADFYNNRGWAKYNLGDKQGAIADYNQAI 477
Query: 613 GIDP 616
++P
Sbjct: 478 KLNP 481
>gi|371777955|ref|ZP_09484277.1| hypothetical protein AnHS1_11097 [Anaerophaga sp. HS1]
Length = 707
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 108/241 (44%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K ++V+ ++ GIA + +Y AI + +LK P A + RG A+ ++ A
Sbjct: 121 KVDPLNVNLLINLGIAYIQTEQYDKAIETYSDVLKLSPNLIRAYLNRGLAKFSAQDTSGA 180
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ DF++AI NP + + R + + A+ D+++A++ P+ + R I+ +
Sbjct: 181 LEDFSKAIDVNPYIPDGYVNRSMIQYYKSDFEGALSDINEAIKLRPDESSFYMNRAIIRY 240
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ D A+ D V ++ N Y G+ + IG+ A E + + L + L
Sbjct: 241 QLDDLRGAMADFDKFVAMEPRNALGYNNRGILRAEIGDLDGAIEDFSRVLALREDDLPTL 300
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ Y++ EKAL V F+ Y+ R + LGQ + A D ++ + +
Sbjct: 301 YYRAMLYKEKGEFEKALSDFNIVADAYPDFAPVYYNRAEVKQALGQFESAQLDYNTAMKL 360
Query: 615 D 615
+
Sbjct: 361 E 361
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 34/277 (12%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI F+QI+K P E R + + + A++D EA++ NP +A+ RG
Sbjct: 41 YILAIQYFNQIIKAKPFLAEPYFYRALGKYYLEDFNGALNDCNEALKRNPYLVDAYNLRG 100
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
L + ++ D + L+ +P + ++L GI + + ++ A+E S +KL
Sbjct: 101 ILYQKLNKPEASVTDFKQGLKVDPLNVNLLINLGIAYIQTEQYDKAIETYSDVLKLSPNL 160
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQ------------ 562
AY GLA S + A E KAI ++ + + + + Q+Y+
Sbjct: 161 IRAYLNRGLAKFSAQDTSGALEDFSKAIDVNPYIPDGYVNRSMIQYYKSDFEGALSDINE 220
Query: 563 --------------------DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
L + A+ + + ++ R + Y+ RG+L +G
Sbjct: 221 AIKLRPDESSFYMNRAIIRYQLDDLRGAMADFDKFVAMEPRNALGYNNRGILRAEIGDLD 280
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AI+D S L + ++ LY RA Y GE+ +A+
Sbjct: 281 GAIEDFSRVLALREDDLPTLYYRAMLYKEKGEFEKAL 317
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLA-----NSEKALECLQQVLY 579
++ IG E ++ AIQ ++A L + FY+ L + AL + L
Sbjct: 28 MTIIGRNALYFEDYILAIQYFNQIIKAKPFLAEPYFYRALGKYYLEDFNGALNDCNEALK 87
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AY+LRG+L L + + ++ D GL +DP N+ L Y +Y +A+
Sbjct: 88 RNPYLVDAYNLRGILYQKLNKPEASVTDFKQGLKVDPLNVNLLINLGIAYIQTEQYDKAI 147
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y I+ ++ + +P + A G + + + A+ ++T+AI+ N EA+ RG
Sbjct: 601 YEMIITDLQKVAEINPNFEFAWFNLGYFNSLLKNFDKAVKNYTKAIEENNEFAEAYFNRG 660
Query: 457 QARAALGESVEAIQDLSKALE 477
R G+ E DLSKA E
Sbjct: 661 LIRIYQGKKTEGTLDLSKAGE 681
>gi|428301371|ref|YP_007139677.1| hypothetical protein Cal6303_4807 [Calothrix sp. PCC 6303]
gi|428237915|gb|AFZ03705.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 280
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 81/160 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ ++ G ++AI+ ++Q LK DP +A RG A Q AAISD+ AI +NP
Sbjct: 99 RGLVHLDMGNKSAAIADYNQALKLDPNNFQAYNNRGNVYAAQGNGNAAISDYNLAITANP 158
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EA+ RG RAA G+ AI D S+A+ P A + RG D N A+ D
Sbjct: 159 NYAEAYNNRGNTRAAQGDRNGAINDYSQAIALNPKYAIAHNNRGNARAAQGDRNGAIADY 218
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ + ++ +AY G A ++G+ A KA QL
Sbjct: 219 NQAILINPNFAAAYNNRGNAYIALGDKPSAIADFQKAAQL 258
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T S + S + DF L RG ++G A++ +++ + +P YP RG
Sbjct: 50 TTSSTNPSTARDFYL-RGQQLQSQGDLPGALAAYNRAITLNPNYPAVYNERGLVHLDMGN 108
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
AAI+D+ +A++ +P+ +A+ RG AA G AI D + A+ PN A+ + RG
Sbjct: 109 KSAAIADYNQALKLDPNNFQAYNNRGNVYAAQGNGNAAISDYNLAITANPNYAEAYNNRG 168
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D N A+ D S + L+ + A+ G A ++ G+ A + +AI ++ NF
Sbjct: 169 NTRAAQGDRNGAINDYSQAIALNPKYAIAHNNRGNARAAQGDRNGAIADYNQAILINPNF 228
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQV 577
A+ + Y L + A+ Q+
Sbjct: 229 AAAYNNRGNAYIALGDKPSAIADFQKA 255
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +G +AIS ++ + +P Y EA RG RA Q + AI+D+++AI N
Sbjct: 132 NRGNVYAAQGNGNAAISDYNLAITANPNYAEAYNNRGNTRAAQGDRNGAINDYSQAIALN 191
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A RG ARAA G+ AI D ++A+ PN A + RG D +A+ D
Sbjct: 192 PKYAIAHNNRGNARAAQGDRNGAIADYNQAILINPNFAAAYNNRGNAYIALGDKPSAIAD 251
Query: 506 LSACVKLDKENKS 518
+L +E K+
Sbjct: 252 FQKAAQLFQEQKN 264
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%)
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+NPS + RGQ + G+ A+ ++A+ PN + +ERG+V+ + +AA+
Sbjct: 54 TNPSTARDFYLRGQQLQSQGDLPGALAAYNRAITLNPNYPAVYNERGLVHLDMGNKSAAI 113
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + +KLD N AY G ++ G A + AI + N+ EA+ +
Sbjct: 114 ADYNQALKLDPNNFQAYNNRGNVYAAQGNGNAAISDYNLAITANPNYAEAYNNRGNTRAA 173
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ A+ Q + ++ +++ A++ RG G AI D + + I+P+
Sbjct: 174 QGDRNGAINDYSQAIALNPKYAIAHNNRGNARAAQGDRNGAIADYNQAILINPNFAAAYN 233
Query: 624 LRASCYHAIGEYREAV 639
R + Y A+G+ A+
Sbjct: 234 NRGNAYIALGDKPSAI 249
>gi|124023494|ref|YP_001017801.1| hypothetical protein P9303_17941 [Prochlorococcus marinus str. MIT
9303]
gi|123963780|gb|ABM78536.1| TPR repeat [Prochlorococcus marinus str. MIT 9303]
Length = 404
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 117/262 (44%), Gaps = 32/262 (12%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G Y SA++ +++ + + + I RG + +E AI D+T+AI+ +
Sbjct: 62 NRGNVKDELGDYQSAMNDYNKAIDINSLDASFYINRGVVKRHSNNIEGAIDDYTKAIELD 121
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A+ L ++ AI D +KAL P A + R I D A+ D
Sbjct: 122 PQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRHAKSYYNRAISKNNINDIKGAISD 181
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------------------- 546
+ ++ SAY G + +G + A H KA+ +
Sbjct: 182 YTKAIEAMPVFASAYYNRGNLMERLGRRQAAVTDHEKALVIKPQLLTAMNERGENKNLVE 241
Query: 547 -----------DRNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
DR+ L+A+ + +Q Q N++ A++C + + ++ +++AY+ RGL
Sbjct: 242 NKIVNDLNNEEDRSQLDAFNYYSQGNAEQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGL 301
Query: 594 LLHGLGQHKKAIKDLSSGLGID 615
+ L ++ A+ D + + I+
Sbjct: 302 ANYNLCDYQAALDDYNKAIEIN 323
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D + +RGIA+VN AI + + L +P + ++ R ++ +
Sbjct: 115 TKAIELDPQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRHAKSYYNRAISKNNIND 174
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
++ AISD+T+AI++ P A+ RG LG A+ D KAL +P ++ERG
Sbjct: 175 IKGAISDYTKAIEAMPVFASAYYNRGNLMERLGRRQAAVTDHEKALVIKPQLLTAMNERG 234
Query: 491 IVNFKFKDF--NAAVEDLSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQL 546
+ K+ N V DL+ + D+ A+ Y G A G + A + + KAI++
Sbjct: 235 ----ENKNLVENKIVNDLNN--EEDRSQLDAFNYYSQGNAEQKRGNNQSAIDCYTKAIEV 288
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ ++ EA+ + +L + + AL+ + + I+ + AY GL L ++ AI
Sbjct: 289 NPHYAEAYNYRGLANYNLCDYQAALDDYNKAIEINSIYEDAYIGCGLAKSALSDYQGAIG 348
Query: 607 DLSSGLGIDPSNI 619
L I+P N+
Sbjct: 349 AYERVLVINPKNV 361
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 97/195 (49%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R ++ + AI +++AI+ NP+ A+ RG + LG+ A+ D +KA++
Sbjct: 30 GEKRFHLKDYQGAIDCYSKAIEINPNNAIAYNNRGNVKDELGDYQSAMNDYNKAIDINSL 89
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A RG+V + A++D + ++LD ++ +AY G+A ++ + K A +
Sbjct: 90 DASFYINRGVVKRHSNNIEGAIDDYTKAIELDPQHATAYYNRGIAKVNLSDNKGAIFDYT 149
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KA+ ++ +++ + ++ + + A+ + + F+ AY+ RG L+ LG+
Sbjct: 150 KALTVNPRHAKSYYNRAISKNNINDIKGAISDYTKAIEAMPVFASAYYNRGNLMERLGRR 209
Query: 602 KKAIKDLSSGLGIDP 616
+ A+ D L I P
Sbjct: 210 QAAVTDHEKALVIKP 224
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 12/194 (6%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ + G+ R L + AI SKA+E PN+A + RG V + D+ +A+ D + +
Sbjct: 26 YFKEGEKRFHLKDYQGAIDCYSKAIEINPNNAIAYNNRGNVKDELGDYQSAMNDYNKAID 85
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ------DLA 565
++ + S Y G+ + A + + KAI+LD H T +Y +L+
Sbjct: 86 INSLDASFYINRGVVKRHSNNIEGAIDDYTKAIELDPQ------HATAYYNRGIAKVNLS 139
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+++ A+ + L ++ R +K+Y+ R + + + K AI D + + P Y R
Sbjct: 140 DNKGAIFDYTKALTVNPRHAKSYYNRAISKNNINDIKGAISDYTKAIEAMPVFASAYYNR 199
Query: 626 ASCYHAIGEYREAV 639
+ +G + AV
Sbjct: 200 GNLMERLGRRQAAV 213
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+++V+ R +R I++ N AIS + + ++ P++ A RG
Sbjct: 149 TKALTVNPRHAKSYYNRAISKNNINDIKGAISDYTKAIEAMPVFASAYYNRGNLMERLGR 208
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQ--------------------------------A 458
+AA++D +A+ P A RG+ A
Sbjct: 209 RQAAVTDHEKALVIKPQLLTAMNERGENKNLVENKIVNDLNNEEDRSQLDAFNYYSQGNA 268
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
G + AI +KA+E P+ A+ + RG+ N+ D+ AA++D + ++++ +
Sbjct: 269 EQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGLANYNLCDYQAALDDYNKAIEINSIYED 328
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
AY GLA S++ +Y+ A A+ + + ++ + A+
Sbjct: 329 AYIGCGLAKSALSDYQGAIGAYERVLVINPKNVAAY 364
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
E+ EA+ + S +A+ + G F KD+ A++ S ++++ N AY
Sbjct: 4 ETPEAMANESSNHSVSEQTANDYFKEGEKRFHLKDYQGAIDCYSKAIEINPNNAIAYNNR 63
Query: 524 GLALSSIGEYKKAEEAHLKAIQ---LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G +G+Y+ A + KAI LD +F G + + ++ E A++ + + +
Sbjct: 64 GNVKDELGDYQSAMNDYNKAIDINSLDASFYINRGVVKRHSNNI---EGAIDDYTKAIEL 120
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + + AY+ RG+ L +K AI D + L ++P + + Y RA + I + + A+
Sbjct: 121 DPQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRHAKSYYNRAISKNNINDIKGAI 179
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G A+ G SAI + + ++ +P Y EA RG A + +AA+ D+ +AI+ N
Sbjct: 264 SQGNAEQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGLANYNLCDYQAALDDYNKAIEIN 323
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+A+ G A++AL + AI + L P + RGI
Sbjct: 324 SIYEDAYIGCGLAKSALSDYQGAIGAYERVLVINPKNVAAYRNRGI 369
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G A + ++AI +T+AI+ NP EA+ RG A L + A+ D +KA+E
Sbjct: 265 QGNAEQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGLANYNLCDYQAALDDYNKAIEINS 324
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
D G+ D+ A+ + ++ +N +AY G+A
Sbjct: 325 IYEDAYIGCGLAKSALSDYQGAIGAYERVLVINPKNVAAYRNRGIA 370
>gi|168704732|ref|ZP_02737009.1| tetratricopeptide repeat protein [Gemmata obscuriglobus UQM 2246]
Length = 607
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 107/255 (41%), Gaps = 34/255 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG GKY AI + + +K DP A RGTA AA+SD TEA++
Sbjct: 31 LERGAESFANGKYEDAIRDYTRAIKLDPDSAAAYSARGTAHQANGNDAAALSDLTEALKR 90
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ RG A A LG +AI DL+ +E P+ A + R + K F+ A+
Sbjct: 91 DPNNATTRYYRGLAYAHLGWPEKAIADLTDFIEMTPDFAPAFYNRALAFEHVKQFDKALA 150
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D + ++LD ++ +A G A ++ G++
Sbjct: 151 DYNEALRLDPKHTNALVGRGTAHATAGQF------------------------------- 179
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+KAL + L +D + S A+ R LL G+ + DL + + P E L
Sbjct: 180 ---DKALADYNEALRLDPKQSLAFFNRAALLFRQGRWAATLTDLDEAVRLAPEKAEYLLF 236
Query: 625 RASCYHAIGEYREAV 639
R++C E EA+
Sbjct: 237 RSTCRMLRSELDEAL 251
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 115/293 (39%), Gaps = 40/293 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG A G++ A++ +++ L+ DP A R Q A ++D EA++
Sbjct: 167 VGRGTAHATAGQFDKALADYNEALRLDPKQSLAFFNRAALLFRQGRWAATLTDLDEAVRL 226
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P E R R E EA++D +A+ P + D R V+ +++AA+
Sbjct: 227 APEKAEYLLFRSTCRMLRSELDEALKDADQAVRSAPRNPDARVHRSSVHLARSNWDAALR 286
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ-LDR--------------- 548
DL+ + LD ++ A+ L+S E K + A +AI+ DR
Sbjct: 287 DLTEVILLDPNHRFAFLNRAWVLASCPEAKHRDPA--QAIKDADRAGELSGWKNPAAIEA 344
Query: 549 ---------NFLEA--WGHLTQFYQDLANSEKALECLQQVLY---IDKRFSKAYHLRGLL 594
+F +A W + + A+ + LY RF G
Sbjct: 345 RAAAAAESGDFPDAVKWQNKALKHPGYDGPAGAVARARLALYEAGKPYRFQSPTAPNGAA 404
Query: 595 L--------HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L H G+ KA+ D + +DP+N Y R S + A+ +Y A+
Sbjct: 405 LLFERGARWHAQGEFDKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAI 457
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
RG +G++ A++ +D + DP RG+ R+ + AI D TE+I+
Sbjct: 407 FERGARWHAQGEFDKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESIRL 466
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-----NFKFKDF 499
+P+ A+ RG R +G A+ D +AL +P A L RG++ + +D
Sbjct: 467 DPTFVWAFNDRGAVRFVMGAWGAALGDFDEALRLDPKHATALANRGLLRAAAGDAALRDA 526
Query: 500 NAAVEDLSAC 509
A+ED A
Sbjct: 527 TKALEDAKAA 536
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG Q E + A++D+ A + +P+ + RG A+ + AI+DL++++
Sbjct: 406 LFERGARWHAQGEFDKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESIR 465
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+P ++RG V F + AA+ D ++LD ++ +A GL ++ G+
Sbjct: 466 LDPTFVWAFNDRGAVRFVMGAWGAALGDFDEALRLDPKHATALANRGLLRAAAGD 520
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A GE +A+ D A +PN+A I + RG V+ +D++ A++DL+ ++LD
Sbjct: 409 RGARWHAQGEFDKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESIRLDP 468
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
A+ G +G + A +A++LD
Sbjct: 469 TFVWAFNDRGAVRFVMGAWGAALGDFDEALRLD 501
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 7/181 (3%)
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE----PNSADILHERGI 491
DF +A++ A + G A A+ + A+ + K F+ PN A +L ERG
Sbjct: 353 GDFPDAVKWQNKALKHPGYDGPA-GAVARARLALYEAGKPYRFQSPTAPNGAALLFERGA 411
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+F+ A+ D A +LD N + G ++ +Y +A + ++I+LD F+
Sbjct: 412 RWHAQGEFDKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESIRLDPTFV 471
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ + AL + L +D + + A RGLL G A++D +
Sbjct: 472 WAFNDRGAVRFVMGAWGAALGDFDEALRLDPKHATALANRGLLRAAAGD--AALRDATKA 529
Query: 612 L 612
L
Sbjct: 530 L 530
>gi|406880258|gb|EKD28661.1| hypothetical protein ACD_79C00251G0007 [uncultured bacterium]
Length = 308
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I + F LS +Q S+I + +K +P +A RG AR Q + AI DF
Sbjct: 13 ICLVFNLSFLFSQ-------SSIEYHTRDIKINPKDSDAYFSRGFARLVQGLCDDAILDF 65
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
T+AI +P+ + RG+ + ++A+ D +KA+ N R FK +
Sbjct: 66 TQAILISPNEALTYFFRGRCKFMKTYYLDALNDFTKAIALNKNYLAAYFFRAKCKFKMNE 125
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
FN A+ED+ ++L +EN Y + L+S+ +Y AE+ +LKAI LD+ A+ +L
Sbjct: 126 FNKALEDIDKTLELSQENADLYAWKAYVLNSLKDYSAAEKLYLKAIDLDKTCHFAYNNLA 185
Query: 559 QFY-----QDLANSEKALECLQQVLYIDKR 583
Y + L N KA+ ++ + + K+
Sbjct: 186 WIYTACENKQLINIPKAISLSKEAVKLQKK 215
>gi|428299078|ref|YP_007137384.1| hypothetical protein Cal6303_2406 [Calothrix sp. PCC 6303]
gi|428235622|gb|AFZ01412.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 584
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 18/267 (6%)
Query: 367 KFCVTRISKSKSISVDFRLSRG----IAQVNEGK-YASAISIFDQILKEDPMYPEALIGR 421
+F S ++++++ + S G +N K Y A + D+ +K D + E
Sbjct: 284 RFTEALTSFDRAVAINPKYSLGHVRRCTMLNRNKMYEPAQAACDEAIKGDGQWGEI---- 339
Query: 422 GTARAF---------QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
G A+A+ Q++ E AI+ A+ P EAW R A L + EA+ +
Sbjct: 340 GAAQAWSEMAHALSGQQQYEKAIAAANRAVGIKPDYAEAWSNRSVALWQLQQYPEALASI 399
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
KA+E +PN A +G + K + A++ + LD +N + + L + +
Sbjct: 400 QKAIELKPNYAQAYFNQGTILATQKQYKTALQSYKKALILDPKNPEGWANTSVVLWHLKQ 459
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y+ A A AI ++RN EAW + L+ + AL+ + I+ + + A+ RG
Sbjct: 460 YQSALTAADHAIAINRNSFEAWYNRGLVLTSLSRHKDALKSYNSAIKINPKSADAFTGRG 519
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNI 619
++L L + +AI L L ++P +
Sbjct: 520 IILSKLKYYPQAIAALQEALKLNPQQV 546
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 115/249 (46%), Gaps = 5/249 (2%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE----- 450
++ A++ FD+ + +P Y + R T + E A + EAI+ + GE
Sbjct: 284 RFTEALTSFDRAVAINPKYSLGHVRRCTMLNRNKMYEPAQAACDEAIKGDGQWGEIGAAQ 343
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
AW A + + +AI ++A+ +P+ A+ R + ++ + + A+ + +
Sbjct: 344 AWSEMAHALSGQQQYEKAIAAANRAVGIKPDYAEAWSNRSVALWQLQQYPEALASIQKAI 403
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+L AY G L++ +YK A +++ KA+ LD E W + + L + A
Sbjct: 404 ELKPNYAQAYFNQGTILATQKQYKTALQSYKKALILDPKNPEGWANTSVVLWHLKQYQSA 463
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
L + I++ +A++ RGL+L L +HK A+K +S + I+P + + R
Sbjct: 464 LTAADHAIAINRNSFEAWYNRGLVLTSLSRHKDALKSYNSAIKINPKSADAFTGRGIILS 523
Query: 631 AIGEYREAV 639
+ Y +A+
Sbjct: 524 KLKYYPQAI 532
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 5/205 (2%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R A Q +L AI+D+ + +P+ AW +G L EA+ +A+ P
Sbjct: 241 RAIAYRQQDQLSKAIADYDRLLAVDPNDAIAWTAQGLILEQLSRFTEALTSFDRAVAINP 300
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE-----NKSAYTYLGLALSSIGEYKK 535
+ R + + K + A +K D + A++ + ALS +Y+K
Sbjct: 301 KYSLGHVRRCTMLNRNKMYEPAQAACDEAIKGDGQWGEIGAAQAWSEMAHALSGQQQYEK 360
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A A +A+ + ++ EAW + + L +AL +Q+ + + +++AY +G +L
Sbjct: 361 AIAAANRAVGIKPDYAEAWSNRSVALWQLQQYPEALASIQKAIELKPNYAQAYFNQGTIL 420
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIE 620
Q+K A++ L +DP N E
Sbjct: 421 ATQKQYKTALQSYKKALILDPKNPE 445
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EA+ +A+ P + + + V K K + A+ +K DK+ A TY +A
Sbjct: 73 EALTACEQAITLRPKNPILWADHSGVLLKMKKYPEAIASAERALKFDKKTSLALTYQCMA 132
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLE-----AWGHLTQFYQDLANSEKALECLQQVLYID 581
S +G ++ + +A+++D N+ + AW H +L ++A + L ++
Sbjct: 133 FSELGRNEEGLDNCNQALKVDGNWGKQSPKLAWLHRGVILTNLGQLDQAAIAYDRTLLLE 192
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ S A R L++ +GQ ++AI + + L
Sbjct: 193 PKDSLALAYRCELMNKIGQPERAITNCNDALA 224
>gi|408527323|emb|CCK25497.1| hypothetical protein BN159_1118 [Streptomyces davawensis JCM 4913]
Length = 1064
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R RG + G+ A++ F L+ DP L R A R + A++DFT A+
Sbjct: 581 RADRGGGHLRAGRRDEAVADFTAALELDPDRASVLAQRAEAHRQSRRYDDAVADFTAALD 640
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+ RGQA G +A+ DL+ AL+ P A L +RG + + + ++ AV
Sbjct: 641 RHHDRVYVLSSRGQAHRQAGRYDDAVTDLTAALDLRPEYAWALAQRGEAHREAERYDEAV 700
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D +A + D + A + G A G + +A A++LD + A + +++
Sbjct: 701 TDFTAALGHDPDFAWALSSRGAAHRQAGRHDEAIADQTAALRLDSAYFWALAERGEVHRE 760
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
++A+ L L + R++ A RG HG G++ +A+ DL++ L +D +
Sbjct: 761 AGRYDEAVADLTAALALSPRYAWALGSRGQAHHGAGRYDEAVADLTAALELDATLDWARS 820
Query: 624 LRASCYHAIGEYREAV 639
R ++ G +EA+
Sbjct: 821 HRVEAHYLAGRSQEAL 836
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 89/209 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG A G+Y A++ L P Y AL RG A + A++DFT A+ +
Sbjct: 651 SRGQAHRQAGRYDDAVTDLTAALDLRPEYAWALAQRGEAHREAERYDEAVTDFTAALGHD 710
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A RG A G EAI D + AL + L ERG V+ + ++ AV D
Sbjct: 711 PDFAWALSSRGAAHRQAGRHDEAIADQTAALRLDSAYFWALAERGEVHREAGRYDEAVAD 770
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+A + L A G A G Y +A A++LD A H + +
Sbjct: 771 LTAALALSPRYAWALGSRGQAHHGAGRYDEAVADLTAALELDATLDWARSHRVEAHYLAG 830
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLL 594
S++ALE L V+ + +RG +
Sbjct: 831 RSQEALEDLSTVMELQPSSPWPLAVRGFM 859
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 4/210 (1%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E ++D A+ P A RG G EA+ D + ALE +P+ A +L +R
Sbjct: 561 EEGMADLERAVALAPDDARARADRGGGHLRAGRRDEAVADFTAALELDPDRASVLAQRAE 620
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTY--LGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ + + ++ AV D +A LD+ + Y G A G Y A A+ L
Sbjct: 621 AHRQSRRYDDAVADFTAA--LDRHHDRVYVLSSRGQAHRQAGRYDDAVTDLTAALDLRPE 678
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ A + +++ ++A+ L D F+ A RG G+H +AI D +
Sbjct: 679 YAWALAQRGEAHREAERYDEAVTDFTAALGHDPDFAWALSSRGAAHRQAGRHDEAIADQT 738
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ L +D + L R + G Y EAV
Sbjct: 739 AALRLDSAYFWALAERGEVHREAGRYDEAV 768
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 125/321 (38%), Gaps = 30/321 (9%)
Query: 322 NTNSESYSKSSISDNKSSDSTESRS-KLSFKWDMLK--ETSNEAKRNKKFCVTRISKSKS 378
++ +++ ++ D+ +D T + + + W + + E EA+R + VT + +
Sbjct: 650 SSRGQAHRQAGRYDDAVTDLTAALDLRPEYAWALAQRGEAHREAERYDE-AVTDFTAALG 708
Query: 379 ISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
DF SRG A G++ AI+ L+ D Y AL RG + A+
Sbjct: 709 HDPDFAWALSSRGAAHRQAGRHDEAIADQTAALRLDSAYFWALAERGEVHREAGRYDEAV 768
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+D T A+ +P A RGQA G EA+ DL+ ALE + R ++
Sbjct: 769 ADLTAALALSPRYAWALGSRGQAHHGAGRYDEAVADLTAALELDATLDWARSHRVEAHYL 828
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG-------------EYKKAEEAHLK 542
A+EDLS ++L + G G E + A L
Sbjct: 829 AGRSQEALEDLSTVMELQPSSPWPLAVRGFMHRMNGDYAQAAADYASALERAPDDRARLW 888
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
++ F G L Q +D CL L D +S+ LRG+ G+
Sbjct: 889 VVRDRGEFHRQTGRLAQAVEDFTT------CLD--LNPDDVWSR--KLRGISHRQAGRST 938
Query: 603 KAIKDLSSGLGIDPSNIECLY 623
+A +DL+ L P + + +
Sbjct: 939 EAREDLTQALAASPGSPDVTF 959
>gi|428306433|ref|YP_007143258.1| hypothetical protein Cri9333_2909 [Crinalium epipsammum PCC 9333]
gi|428247968|gb|AFZ13748.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 509
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 120/254 (47%), Gaps = 8/254 (3%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I DF +S+ +Y +A+ +DQ LK +P Y A + +G+ + + A+S++
Sbjct: 241 IGNDFYISQ--------QYEAALKGYDQALKIEPKYVLAWLYKGSLLLELKRYQEAVSNY 292
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
A+Q P + A RG A + + EAI KA++ +PN+ ++ R K +
Sbjct: 293 DRALQFKPDSTVALSNRGLALDHIQKYEEAIASFDKAIKLQPNAPEVWTGRCYALAKLQK 352
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+ +K+ E A+ G L+ + +Y +A + KAI+ + N EAW +
Sbjct: 353 YQDAIASCEVAIKIQPEYSDAWNNRGYVLNQVQQYDQALLSFEKAIEFEPNNAEAWANKG 412
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
L + +A+ Q + + +++A++ RG L L + K A+ + + + P+
Sbjct: 413 LALDHLQQNAEAIAAYDQAIKLQPNYAQAWYGRGNALFSLNKPKDALAAYNKAISLKPNY 472
Query: 619 IECLYLRASCYHAI 632
+ L +++ A+
Sbjct: 473 QQALNSKSAVLAAL 486
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 99/211 (46%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ EAA+ + +A++ P AW +G L EA+ + +AL+F+P+S L
Sbjct: 249 QQYEAALKGYDQALKIEPKYVLAWLYKGSLLLELKRYQEAVSNYDRALQFKPDSTVALSN 308
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG+ + + A+ +KL +T AL+ + +Y+ A + AI++
Sbjct: 309 RGLALDHIQKYEEAIASFDKAIKLQPNAPEVWTGRCYALAKLQKYQDAIASCEVAIKIQP 368
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ +AW + + ++AL ++ + + ++A+ +GL L L Q+ +AI
Sbjct: 369 EYSDAWNNRGYVLNQVQQYDQALLSFEKAIEFEPNNAEAWANKGLALDHLQQNAEAIAAY 428
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + P+ + Y R + ++ + ++A+
Sbjct: 429 DQAIKLQPNYAQAWYGRGNALFSLNKPKDAL 459
>gi|422340528|ref|ZP_16421469.1| TPR domain-containing protein [Treponema denticola F0402]
gi|325475702|gb|EGC78878.1| TPR domain-containing protein [Treponema denticola F0402]
Length = 337
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI + + ++ DP Y EA + RG + E E A++DF + I+ P +A+ +G
Sbjct: 59 AIYYYTKAIEADPDYIEAYLNRGEMYYYVNEHEKALADFDKVIELRPKEDKAYYFKGLLL 118
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G +AI++L+ A+ + + R + ++ A ED++ +KL++++
Sbjct: 119 NDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKAFEDINTAIKLNQKSAKL 178
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G A A +LD N + + L Y + +A E + +++
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIATKLDPNDIWPYNGLLFIYIETKKHNEAFEIVNKMIK 238
Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ + Y +RGLL GQ+K+A++D ++G+ + P N +R Y + EY++A
Sbjct: 239 MKPSWIGILYGIRGLLFSFRGQYKEAVEDCNTGIRMYPQNASLYNIRGKIYFDLKEYKKA 298
Query: 639 V 639
+
Sbjct: 299 I 299
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Query: 522 YLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
Y +A ++ E K A + KAI+ D +++EA+ + + Y + EKAL +V+
Sbjct: 42 YFNMAGNTAKEKKDGTRAIYYYTKAIEADPDYIEAYLNRGEMYYYVNEHEKALADFDKVI 101
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ + KAY+ +GLLL+ G + KAI++L++ + ++ E R++ Y I EY +A
Sbjct: 102 ELRPKEDKAYYFKGLLLNDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKA 161
Query: 639 V 639
Sbjct: 162 F 162
>gi|449107797|ref|ZP_21744444.1| hypothetical protein HMPREF9722_00140 [Treponema denticola ATCC
33520]
gi|448962748|gb|EMB43435.1| hypothetical protein HMPREF9722_00140 [Treponema denticola ATCC
33520]
Length = 337
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI + + ++ DP Y EA + RG + E E A++DF + I+ P +A+ +G
Sbjct: 59 AIYYYTKAIEADPDYIEAYLNRGEMYYYVNEHEKALADFDKVIELRPKEDKAYYFKGLLL 118
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G +AI++L+ A+ + + R + ++ A ED++ +KL++++
Sbjct: 119 NDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKAFEDINTAIKLNQKSAKL 178
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G A A +LD N + + L Y + +A E + +++
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIATKLDPNDIWPYNGLLFIYIETKKHNEAFEIVNKMIK 238
Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ + Y +RGLL GQ+K+A++D ++G+ + P N +R Y + EY++A
Sbjct: 239 MKPSWIGILYGIRGLLFSFRGQYKEAVEDCNTGIRMYPQNASLYNIRGKIYFDLKEYKKA 298
Query: 639 V 639
+
Sbjct: 299 I 299
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Query: 522 YLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
Y +A ++ E K A + KAI+ D +++EA+ + + Y + EKAL +V+
Sbjct: 42 YFNMAGNTAKEKKDGTRAIYYYTKAIEADPDYIEAYLNRGEMYYYVNEHEKALADFDKVI 101
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ + KAY+ +GLLL+ G + KAI++L++ + ++ E R++ Y I EY +A
Sbjct: 102 ELRPKEDKAYYFKGLLLNDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKA 161
Query: 639 V 639
Sbjct: 162 F 162
>gi|220907546|ref|YP_002482857.1| hypothetical protein Cyan7425_2135 [Cyanothece sp. PCC 7425]
gi|219864157|gb|ACL44496.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 373
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Q+ G A++ ++Q+++ P A RG + L+ AI+DF I+ NP
Sbjct: 125 RGSIQLESGNLQGALADYNQVIRLYPNEANAYFIRGAIQLQLDNLQGAIADFNRGIKLNP 184
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG +A LG EAI D + + PN H RG + D A+ D
Sbjct: 185 NEAKAYFIRGTIQAGLGNYQEAIADFGQEIRLSPNDPLAYHRRGDLRAYTGDLQGAIADY 244
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++L AY G A + G+ + A + +AI+L+ F + + +L N
Sbjct: 245 DQVIRLSPNCHCAYYDRGFARAQSGDLQGAIADYNQAIKLNPEFATVYVARGNAHDELGN 304
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+ Q + ++ ++AY+ RG G + AI D
Sbjct: 305 RQAAIADYNQAIKLNPELAEAYYSRGGNRRHSGDKQGAIAD 345
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 119/268 (44%), Gaps = 7/268 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
SK IS + + A+ Y AI+ DQ ++ +P Y EA + RG+ + + AI
Sbjct: 46 SKQISAEEFFGQAKAKYAREDYQGAIAAVDQAIRLNPNYAEAYLMRGSIQTELGNYQEAI 105
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+D + I+ NP+ A+ RG + G A+ D ++ + PN A+ RG + +
Sbjct: 106 ADLDQGIKLNPNNASAYFIRGSIQLESGNLQGALADYNQVIRLYPNEANAYFIRGAIQLQ 165
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW- 554
+ A+ D + +KL+ AY G + +G Y++A + I+L N A+
Sbjct: 166 LDNLQGAIADFNRGIKLNPNEAKAYFIRGTIQAGLGNYQEAIADFGQEIRLSPNDPLAYH 225
Query: 555 --GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
G L + DL + A+ QV+ + AY+ RG G + AI D + +
Sbjct: 226 RRGDLRAYTGDL---QGAIADYDQVIRLSPNCHCAYYDRGFARAQSGDLQGAIADYNQAI 282
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAVI 640
++P R + + +G R+A I
Sbjct: 283 KLNPEFATVYVARGNAHDELGN-RQAAI 309
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG Q G Y AI+ F Q ++ P P A RG RA+ +L+ AI+D+ + I+ +P
Sbjct: 193 RGTIQAGLGNYQEAIADFGQEIRLSPNDPLAYHRRGDLRAYTGDLQGAIADYDQVIRLSP 252
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG ARA G+ AI D ++A++ P A + RG + + + AA+ D
Sbjct: 253 NCHCAYYDRGFARAQSGDLQGAIADYNQAIKLNPEFATVYVARGNAHDELGNRQAAIADY 312
Query: 507 SACVKLDKENKSAYT-------YLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ +KL+ E AY + G +I +Y+KA E L IQ D++
Sbjct: 313 NQAIKLNPELAEAYYSRGGNRRHSGDKQGAIADYQKAAE--LAQIQGDKDL 361
>gi|268323937|emb|CBH37525.1| conserved hypothetical protein, tetratricopeptide repeat family
[uncultured archaeon]
Length = 529
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 123/261 (47%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S +V+ L +G + KY A+ +++ + +P + +A G+G A + E A+
Sbjct: 8 SKTVEKWLEKGDDLIKRKKYEKALKAYEKAIVINPQHAKAWNGKGVALDDLKRNEDALEA 67
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AI NP EAW +G A L A+ KA+E P+ A++ + +G + K
Sbjct: 68 YEKAIDINPDFAEAWNNKGSALDDLKRHENALNAFEKAIEINPDFAEVWNGKGNALYGLK 127
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ ++++ + A+ G AL + Y+ A +A+ KA++++ F E W +
Sbjct: 128 RYENALNAFEKAIEINPDFAEAWNGKGSALDDLERYEDALKAYDKALEINPLFPEVWNNK 187
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
L E+AL + + I+ ++ A++ +G+ L L ++++A+ + P
Sbjct: 188 GYTLGQLKRYEEALNAFEGAIEINSEYAAAWNGKGIALCTLERYEEALTAYEKAIEKGPE 247
Query: 618 NIECLYLRASCYHAIGEYREA 638
++ Y +G+ + A
Sbjct: 248 DVRPYSNSGELYFNLGDLKSA 268
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 119/233 (51%), Gaps = 4/233 (1%)
Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
KRN+ + K+ I+ DF + +G A + ++ +A++ F++ ++ +P + E
Sbjct: 59 KRNED-ALEAYEKAIDINPDFAEAWNNKGSALDDLKRHENALNAFEKAIEINPDFAEVWN 117
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
G+G A + E A++ F +AI+ NP EAW +G A L +A++ KALE
Sbjct: 118 GKGNALYGLKRYENALNAFEKAIEINPDFAEAWNGKGSALDDLERYEDALKAYDKALEIN 177
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P ++ + +G + K + A+ ++++ E +A+ G+AL ++ Y++A A
Sbjct: 178 PLFPEVWNNKGYTLGQLKRYEEALNAFEGAIEINSEYAAAWNGKGIALCTLERYEEALTA 237
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+ KAI+ + + + + Y +L + + A E ++ L DK F+ A L+G
Sbjct: 238 YEKAIEKGPEDVRPYSNSGELYFNLGDLKSASEKMEGALTKDKTFASALMLKG 290
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 75/152 (49%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
E+G K K + A++ + ++ ++ A+ G+AL + + A EA+ KAI ++
Sbjct: 16 EKGDDLIKRKKYEKALKAYEKAIVINPQHAKAWNGKGVALDDLKRNEDALEAYEKAIDIN 75
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+F EAW + DL E AL ++ + I+ F++ ++ +G L+GL +++ A+
Sbjct: 76 PDFAEAWNNKGSALDDLKRHENALNAFEKAIEINPDFAEVWNGKGNALYGLKRYENALNA 135
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ I+P E + S + Y +A+
Sbjct: 136 FEKAIEINPDFAEAWNGKGSALDDLERYEDAL 167
>gi|319642943|ref|ZP_07997579.1| exported Tpr repeat-family protein [Bacteroides sp. 3_1_40A]
gi|317385491|gb|EFV66434.1| exported Tpr repeat-family protein [Bacteroides sp. 3_1_40A]
Length = 658
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 124/303 (40%), Gaps = 38/303 (12%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+ S I+ D ++ G + Y +I F+Q++ P + RG A+ + +
Sbjct: 4 VVASAQINTDRVMAIGRNALYFEDYVLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQ 63
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A SD +EAI+ NP A++ RG AR AI+D +KALEF+P + + H +
Sbjct: 64 GAESDCSEAIERNPFVVSAYQVRGLARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALC 123
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ +D+ A DL + + AY G + AE+ KAI++DR +
Sbjct: 124 RIRQEDYKGAKNDLDKLIAISPRYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDAD 183
Query: 553 AWGH------------------------------------LTQFYQDLANSEKALECLQQ 576
W L +++Q+ N A+
Sbjct: 184 TWASRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQN--NLRGAMSDYDI 241
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L ID ++ RGLL +G +AI+D + + ++P N+ ++ R G+Y+
Sbjct: 242 ALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYK 301
Query: 637 EAV 639
A+
Sbjct: 302 GAI 304
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SR I ++ + +Y A + FD ++ I R AR Q L A+SD+ A+ +
Sbjct: 187 SRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDID 246
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AIQD + +E EP++ + RG++ + D+ A++D
Sbjct: 247 PNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKD 306
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
S + Y Y A IG+ K A+ K + QLD+
Sbjct: 307 YSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVLKAQLDK 351
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+ ++ + Y A + D+++ P Y +A + RG Q++ AA DF +AI+ +
Sbjct: 121 ALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRY 180
Query: 448 AGEAW----------KRRGQARAALGESVE------------------------AIQDLS 473
+ W +R A A ++ A+ D
Sbjct: 181 DADTWASRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYD 240
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
AL+ +PN+ + RG++ + D N A++D + ++++ +N A GL L G+Y
Sbjct: 241 IALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDY 300
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQ 559
K A + + I NFL + + Q
Sbjct: 301 KGAIKDYSTVINEYPNFLLGYQYRAQ 326
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
D++++ P + A RG + ++ AAI D+ AIQ +P +A+ RG LG
Sbjct: 568 DKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGN 627
Query: 465 SVEAIQDLSKALE 477
+ + IQDLSKA E
Sbjct: 628 NRQGIQDLSKAGE 640
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
+I + + A+ +PN + R + + +DF +A+EDL+ + ++ Y L
Sbjct: 471 SIDEQTAAIVADPNDVNKRFARSLDFYLVQDFASAIEDLNQAIIIEDHFFPVYFNRALIR 530
Query: 528 SSIGEYKKAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
EY+K E E LKA +++ ++A A+ E L +V+ + F
Sbjct: 531 YKQLEYQKMEKEYDLKAGPGEKSAVKA-----------ADYEMVKRDLDKVIELAPDFVY 579
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY+ RG +L L ++ AI D + +DP + + R + +G R+ +
Sbjct: 580 AYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGI 632
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQ-ILKEDPMYPEALIGRGTARAFQREL 431
++K + S+DF L + +ASAI +Q I+ ED +P R R Q E
Sbjct: 486 VNKRFARSLDFYLVQ--------DFASAIEDLNQAIIIEDHFFP-VYFNRALIRYKQLEY 536
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ ++ +++ P A K AA E V+ +DL K +E P+ + RG
Sbjct: 537 QKMEKEYD--LKAGPGEKSAVK------AADYEMVK--RDLDKVIELAPDFVYAYYNRGN 586
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
V KD+ AA+ D ++LD + AY GL +G
Sbjct: 587 VLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLG 626
>gi|145505641|ref|XP_001438787.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405959|emb|CAK71390.1| unnamed protein product [Paramecium tetraurelia]
Length = 348
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 112/230 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A +Y AI+ ++Q L +P A +G A Q + + AI + E I N
Sbjct: 38 NKGSALQKLNQYQEAINCYNQALSINPKNDSAWYQKGRALDTQNQSQEAIECYNEVISKN 97
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW R+G A L + EAI ++AL P + +G++ + K + A+E
Sbjct: 98 PQHDSAWFRKGLALQNLNQHQEAINCYNQALSINPKRFSAWNNKGLIIQRLKQYQEAIEC 157
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + ++ + A+ G AL + +Y++A + +A+ ++ AW + +
Sbjct: 158 YNQALFVNPKFDLAWNNKGSALQKLNQYQEAINCYNQALFINPKNDSAWYNKGRALDTQN 217
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
S++A+EC + + + ++ A+H +GL L L Q+++ ++ + + I+
Sbjct: 218 QSQEAIECYNEAISKNPQYDSAWHSKGLALQNLNQYEEVLECYNKSISIN 267
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 103/211 (48%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ + AI + +A+ NP AW +G A L + EAI ++AL P + ++
Sbjct: 13 KQYQEAIECYNQALFINPKFDLAWNNKGSALQKLNQYQEAINCYNQALSINPKNDSAWYQ 72
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G A+E + + + ++ SA+ GLAL ++ ++++A + +A+ ++
Sbjct: 73 KGRALDTQNQSQEAIECYNEVISKNPQHDSAWFRKGLALQNLNQHQEAINCYNQALSINP 132
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
AW + Q L ++A+EC Q L+++ +F A++ +G L L Q+++AI
Sbjct: 133 KRFSAWNNKGLIIQRLKQYQEAIECYNQALFVNPKFDLAWNNKGSALQKLNQYQEAINCY 192
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ L I+P N Y + + +EA+
Sbjct: 193 NQALFINPKNDSAWYNKGRALDTQNQSQEAI 223
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 113/244 (46%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI ++Q L +P + A +G+A + + AI+ + +A+ NP AW ++
Sbjct: 14 QYQEAIECYNQALFINPKFDLAWNNKGSALQKLNQYQEAINCYNQALSINPKNDSAWYQK 73
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+A +S EAI+ ++ + P +G+ A+ + + ++ +
Sbjct: 74 GRALDTQNQSQEAIECYNEVISKNPQHDSAWFRKGLALQNLNQHQEAINCYNQALSINPK 133
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
SA+ GL + + +Y++A E + +A+ ++ F AW + Q L ++A+ C
Sbjct: 134 RFSAWNNKGLIIQRLKQYQEAIECYNQALFVNPKFDLAWNNKGSALQKLNQYQEAINCYN 193
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
Q L+I+ + A++ +G L Q ++AI+ + + +P + + + +Y
Sbjct: 194 QALFINPKNDSAWYNKGRALDTQNQSQEAIECYNEAISKNPQYDSAWHSKGLALQNLNQY 253
Query: 636 REAV 639
E +
Sbjct: 254 EEVL 257
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G A +Y AI+ ++Q L +P A +G A Q + + AI + EAI N
Sbjct: 174 NKGSALQKLNQYQEAINCYNQALFINPKNDSAWYNKGRALDTQNQSQEAIECYNEAISKN 233
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
P AW +G A L + E ++ +K++ + +G++
Sbjct: 234 PQYDSAWHSKGLALQNLNQYEEVLECYNKSISINCQARKSFENKGVI 280
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%)
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
T+L L S+ +Y++A E + +A+ ++ F AW + Q L ++A+ C Q L I
Sbjct: 3 TFLNCILQSLKQYQEAIECYNQALFINPKFDLAWNNKGSALQKLNQYQEAINCYNQALSI 62
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + A++ +G L Q ++AI+ + + +P + + + + +++EA+
Sbjct: 63 NPKNDSAWYQKGRALDTQNQSQEAIECYNEVISKNPQHDSAWFRKGLALQNLNQHQEAI 121
>gi|307153690|ref|YP_003889074.1| hypothetical protein Cyan7822_3868 [Cyanothece sp. PCC 7822]
gi|306983918|gb|ADN15799.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
Length = 275
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 30/207 (14%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI+DFT+AI P+ +A+ R A LG+ +A+ D S+AL+ PN R V
Sbjct: 57 AIADFTQAIALAPNDPDAYYNRAYAYLILGDFEKAVADYSQALQINPNYTYAYGNRCYVY 116
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F K + AA+ D + L + Y Y G A S + + ++A + KAI L
Sbjct: 117 FLSKKYEAAITDCDKAISLQADYADFYIYRGNAKSELNQNQEALSDYEKAISL------- 169
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
AN+ K +KA++ RG L HK+AI D + +
Sbjct: 170 ----------AANNPKTR-------------AKAFYNRGRTYQSLENHKQAIADYTDSIA 206
Query: 614 IDPSNIECLYLRASCYHAIGEYREAVI 640
++P + + Y RA+ Y+A+G +EA++
Sbjct: 207 LNPDDGDAYYNRAASYYALGNNQEAMV 233
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 4/192 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ +++ Y AI+ F Q + P P+A R A + E A++D+++A+Q NP+
Sbjct: 45 GVDKLSAANYTGAIADFTQAIALAPNDPDAYYNRAYAYLILGDFEKAVADYSQALQINPN 104
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ R + AI D KA+ + + AD RG + A+ D
Sbjct: 105 YTYAYGNRCYVYFLSKKYEAAITDCDKAISLQADYADFYIYRGNAKSELNQNQEALSDYE 164
Query: 508 ACVKLDKENK----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+ L N A+ G S+ +K+A + +I L+ + +A+ + Y
Sbjct: 165 KAISLAANNPKTRAKAFYNRGRTYQSLENHKQAIADYTDSIALNPDDGDAYYNRAASYYA 224
Query: 564 LANSEKALECLQ 575
L N+++A+ L+
Sbjct: 225 LGNNQEAMVDLE 236
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +R A + G + A++ + Q L+ +P Y A R ++ EAAI+D +A
Sbjct: 73 DAYYNRAYAYLILGDFEKAVADYSQALQINPNYTYAYGNRCYVYFLSKKYEAAITDCDKA 132
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS----ADILHERGIVNFKFK 497
I + + RG A++ L ++ EA+ D KA+ N+ A + RG +
Sbjct: 133 ISLQADYADFYIYRGNAKSELNQNQEALSDYEKAISLAANNPKTRAKAFYNRGRTYQSLE 192
Query: 498 DFNAAVEDLSACVKLDKENKSAY 520
+ A+ D + + L+ ++ AY
Sbjct: 193 NHKQAIADYTDSIALNPDDGDAY 215
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NR + Y + ++ I DCDKA+ L YI +G A S L + +EALS +EK
Sbjct: 111 NRCYVYFLSKKYEAAITDCDKAISLQADYADFYIYRGNAKSELNQNQEALSDYEKA 166
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE----ALIGRGTARAFQ--RELEAAI 435
DF + RG A+ + A+S +++ + P+ A RG R +Q + AI
Sbjct: 141 DFYIYRGNAKSELNQNQEALSDYEKAISLAANNPKTRAKAFYNRG--RTYQSLENHKQAI 198
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+D+T++I NP G+A+ R + ALG + EA+ DL A
Sbjct: 199 ADYTDSIALNPDDGDAYYNRAASYYALGNNQEAMVDLEIA 238
>gi|265751998|ref|ZP_06087791.1| TPR repeat-containing protein [Bacteroides sp. 3_1_33FAA]
gi|423229339|ref|ZP_17215744.1| hypothetical protein HMPREF1063_01564 [Bacteroides dorei
CL02T00C15]
gi|423245182|ref|ZP_17226256.1| hypothetical protein HMPREF1064_02462 [Bacteroides dorei
CL02T12C06]
gi|263236790|gb|EEZ22260.1| TPR repeat-containing protein [Bacteroides sp. 3_1_33FAA]
gi|392634308|gb|EIY28233.1| hypothetical protein HMPREF1063_01564 [Bacteroides dorei
CL02T00C15]
gi|392640115|gb|EIY33921.1| hypothetical protein HMPREF1064_02462 [Bacteroides dorei
CL02T12C06]
Length = 669
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P + RG A+ + + A SD +EAI+ NP A++ RG
Sbjct: 39 YVLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRG 98
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR AI+D +KALEF+P + + H + + +D+ A DL + +
Sbjct: 99 LARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRY 158
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------------------- 556
AY G + AE+ KAI++DR + W
Sbjct: 159 TKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADFDH 218
Query: 557 ----------------LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
L +++Q+ N A+ L ID ++ RGLL +G
Sbjct: 219 AIRLSTRNSGVYINRALARYHQN--NLRGAMSDYDIALDIDPNNFIGHYNRGLLRAQVGD 276
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D + + ++P N+ ++ R G+Y+ A+
Sbjct: 277 DNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAI 315
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SR I ++ + +Y A + FD ++ I R AR Q L A+SD+ A+ +
Sbjct: 198 SRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDID 257
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AIQD + +E EP++ + RG++ + D+ A++D
Sbjct: 258 PNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKD 317
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
S + Y Y A IG+ K A+ K + QLD+
Sbjct: 318 YSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVLKAQLDK 362
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+ ++ + Y A + D+++ P Y +A + RG Q++ AA DF +AI+ +
Sbjct: 132 ALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRY 191
Query: 448 AGEAW----------KRRGQARAALGESVE------------------------AIQDLS 473
+ W +R A A ++ A+ D
Sbjct: 192 DADTWASRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYD 251
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
AL+ +PN+ + RG++ + D N A++D + ++++ +N A GL L G+Y
Sbjct: 252 IALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDY 311
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQ 559
K A + + I NFL + + Q
Sbjct: 312 KGAIKDYSTVINEYPNFLLGYQYRAQ 337
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D++++ P + A RG + ++ AAI D+ AIQ +P +A+ RG LG
Sbjct: 578 LDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLG 637
Query: 464 ESVEAIQDLSKALEF 478
+ + IQDLSKA E
Sbjct: 638 NNRQGIQDLSKAGEL 652
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 109/572 (19%), Positives = 222/572 (38%), Gaps = 78/572 (13%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
N A C + E +K D DK + + P +AY+++G + K++ EK + A
Sbjct: 130 NMALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRG----EVDLKQKDTLAAEKDFGKA 185
Query: 134 L---HQSADL---KQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSE 187
+ AD + L L+ Q R E D +++ L+ SG+ N ++
Sbjct: 186 IEIDRYDADTWASRAILRLQ-------QQRYKDAEADFDHAIR-LSTRNSGVYINRALAR 237
Query: 188 TSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSD-------------EAKGGSSV 234
+N+ + + D + D+ ++ L + E + + +
Sbjct: 238 YHQNNLRGAMSDYDI-ALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMM 296
Query: 235 PVSKSGLHIN------GKLRE----VSENHNGSSDGSKSTHASRDASEINRQSSDDFDIC 284
+ GL ++ G +++ ++E N A R ++ +D+F +
Sbjct: 297 AIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVL 356
Query: 285 NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
+DK + + + + + T + + SD N +Y K ++DN+ E
Sbjct: 357 KAQLDKQNGVDPNKQTADNTENNKTRKKSDK--------NMNNYRKIVVADNEEG---EE 405
Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
+ K ++ + + N + F +T K + + I +N K I
Sbjct: 406 KYKSDYRGRVQDKNVNIVPQ-PMFVLTYYEKHDDVKRQVNYYKFIETLNNQKVLPGRLII 464
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
+E P+ E + F A+I + T AI ++P+ R + +
Sbjct: 465 TN--EEAPLTEEQ-----ATKHF-----ASIDEQTAAIVADPNDVNKRFARSLDFYLVQD 512
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
AI+DL++A+ E N + R ++ +K ++ ++ +K + KSA
Sbjct: 513 FASAIEDLNQAIIIEGNFFPVYFNRALIRYKQLEYQKMEKEYD--LKTNPGEKSA----- 565
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
+Y+ + K I+L +F+ A+ + L + A+ + + +D +F
Sbjct: 566 ---VKAADYEMVKRDLDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKF 622
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
+ AY RGL LG +++ I+DLS LG+
Sbjct: 623 ADAYFNRGLTHIFLGNNRQGIQDLSKAGELGL 654
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
+I + + A+ +PN + R + + +DF +A+EDL+ + ++ Y L
Sbjct: 482 SIDEQTAAIVADPNDVNKRFARSLDFYLVQDFASAIEDLNQAIIIEGNFFPVYFNRALIR 541
Query: 528 SSIGEYKKAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
EY+K E E LK +++ ++A A+ E L +V+ + F
Sbjct: 542 YKQLEYQKMEKEYDLKTNPGEKSAVKA-----------ADYEMVKRDLDKVIELAPDFVY 590
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY+ RG +L L ++ AI D + +DP + + R + +G R+ +
Sbjct: 591 AYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGI 643
>gi|345512965|ref|ZP_08792489.1| TPR repeat-containing protein [Bacteroides dorei 5_1_36/D4]
gi|423240163|ref|ZP_17221278.1| hypothetical protein HMPREF1065_01901 [Bacteroides dorei
CL03T12C01]
gi|229434955|gb|EEO45032.1| TPR repeat-containing protein [Bacteroides dorei 5_1_36/D4]
gi|392645152|gb|EIY38886.1| hypothetical protein HMPREF1065_01901 [Bacteroides dorei
CL03T12C01]
Length = 669
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P + RG A+ + + A SD +EAI+ NP A++ RG
Sbjct: 39 YVLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRG 98
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR AI+D +KALEF+P + + H + + +D+ A DL + +
Sbjct: 99 LARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRY 158
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------------------- 556
AY G + AE+ KAI++DR + W
Sbjct: 159 TKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADFDH 218
Query: 557 ----------------LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
L +++Q+ N A+ L ID ++ RGLL +G
Sbjct: 219 AIRLSTRNSGVYINRALARYHQN--NLRGAMSDYDIALDIDPNNFIGHYNRGLLRAQVGD 276
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D + + ++P N+ ++ R G+Y+ A+
Sbjct: 277 DNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAI 315
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SR I ++ + +Y A + FD ++ I R AR Q L A+SD+ A+ +
Sbjct: 198 SRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDID 257
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AIQD + +E EP++ + RG++ + D+ A++D
Sbjct: 258 PNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKD 317
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
S + Y Y A IG+ K A+ K + QLD+
Sbjct: 318 YSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVLKAQLDK 362
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+ ++ + Y A + D+++ P Y +A + RG Q++ AA DF +AI+ +
Sbjct: 132 ALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRY 191
Query: 448 AGEAW----------KRRGQARAALGESVE------------------------AIQDLS 473
+ W +R A A ++ A+ D
Sbjct: 192 DADTWASRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYD 251
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
AL+ +PN+ + RG++ + D N A++D + ++++ +N A GL L G+Y
Sbjct: 252 IALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDY 311
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQ 559
K A + + I NFL + + Q
Sbjct: 312 KGAIKDYSTVINEYPNFLLGYQYRAQ 337
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D++++ P + A RG + ++ AAI D+ AIQ +P +A+ RG LG
Sbjct: 578 LDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLG 637
Query: 464 ESVEAIQDLSKALEF 478
+ + IQDLSKA E
Sbjct: 638 NNRQGIQDLSKAGEL 652
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
+I + + A+ +PN + R + + +DF +A+EDL+ + ++ Y L
Sbjct: 482 SIDEQTAAIVADPNDVNKRFARSLDFYLVQDFASAIEDLNQAIIIEGNFFPVYFNRALIR 541
Query: 528 SSIGEYKKAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
EY+K E E LKA +++ ++A A+ E L +V+ + F
Sbjct: 542 YKQLEYQKMEKEYDLKANPGEKSAVKA-----------ADYEMVKRDLDKVIELAPDFVY 590
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY+ RG +L L ++ AI D + +DP + + R + +G R+ +
Sbjct: 591 AYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGI 643
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 109/572 (19%), Positives = 222/572 (38%), Gaps = 78/572 (13%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
N A C + E +K D DK + + P +AY+++G + K++ EK + A
Sbjct: 130 NMALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRG----EVDLKQKDTLAAEKDFGKA 185
Query: 134 L---HQSADL---KQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSE 187
+ AD + L L+ Q R E D +++ L+ SG+ N ++
Sbjct: 186 IEIDRYDADTWASRAILRLQ-------QQRYKDAEADFDHAIR-LSTRNSGVYINRALAR 237
Query: 188 TSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSD-------------EAKGGSSV 234
+N+ + + D + D+ ++ L + E + + +
Sbjct: 238 YHQNNLRGAMSDYDI-ALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMM 296
Query: 235 PVSKSGLHIN------GKLRE----VSENHNGSSDGSKSTHASRDASEINRQSSDDFDIC 284
+ GL ++ G +++ ++E N A R ++ +D+F +
Sbjct: 297 AIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVL 356
Query: 285 NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
+DK + + + + + T + + SD N +Y K ++DN+ E
Sbjct: 357 KAQLDKQNGVDPNKQTADNTENNKTRKKSDK--------NMNNYRKIVVADNEEG---EE 405
Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
+ K ++ + + N + F +T K + + I +N K I
Sbjct: 406 KYKSDYRGRVQDKNVNIVPQ-PMFVLTYYEKHDDVKRQVNYYKFIETLNNQKVLPGRLII 464
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
+E P+ E + F A+I + T AI ++P+ R + +
Sbjct: 465 TN--EEAPLTEEQ-----ATKHF-----ASIDEQTAAIVADPNDVNKRFARSLDFYLVQD 512
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
AI+DL++A+ E N + R ++ +K ++ ++ +K + KSA
Sbjct: 513 FASAIEDLNQAIIIEGNFFPVYFNRALIRYKQLEYQKMEKEYD--LKANPGEKSA----- 565
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
+Y+ + K I+L +F+ A+ + L + A+ + + +D +F
Sbjct: 566 ---VKAADYEMVKRDLDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKF 622
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
+ AY RGL LG +++ I+DLS LG+
Sbjct: 623 ADAYFNRGLTHIFLGNNRQGIQDLSKAGELGL 654
>gi|150006540|ref|YP_001301284.1| hypothetical protein BVU_4060 [Bacteroides vulgatus ATCC 8482]
gi|294778841|ref|ZP_06744258.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
gi|345521560|ref|ZP_08800883.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
gi|149934964|gb|ABR41662.1| putative exported Tpr repeat-family protein [Bacteroides vulgatus
ATCC 8482]
gi|294447294|gb|EFG15877.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
gi|345456509|gb|EET14661.2| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
Length = 669
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P + RG A+ + + A SD +EAI+ NP A++ RG
Sbjct: 39 YVLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRG 98
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR AI+D +KALEF+P + + H + + +D+ A DL + +
Sbjct: 99 LARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRY 158
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------------------- 556
AY G + AE+ KAI++DR + W
Sbjct: 159 TKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADFDH 218
Query: 557 ----------------LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
L +++Q+ N A+ L ID ++ RGLL +G
Sbjct: 219 AIRLSTRNSGVYINRALARYHQN--NLRGAMSDYDIALDIDPNNFIGHYNRGLLRAQVGD 276
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D + + ++P N+ ++ R G+Y+ A+
Sbjct: 277 DNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAI 315
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SR I ++ + +Y A + FD ++ I R AR Q L A+SD+ A+ +
Sbjct: 198 SRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDID 257
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AIQD + +E EP++ + RG++ + D+ A++D
Sbjct: 258 PNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKD 317
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
S + Y Y A IG+ K A+ K + QLD+
Sbjct: 318 YSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVLKAQLDK 362
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+ ++ + Y A + D+++ P Y +A + RG Q++ AA DF +AI+ +
Sbjct: 132 ALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRY 191
Query: 448 AGEAW----------KRRGQARAALGESVE------------------------AIQDLS 473
+ W +R A A ++ A+ D
Sbjct: 192 DADTWASRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYD 251
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
AL+ +PN+ + RG++ + D N A++D + ++++ +N A GL L G+Y
Sbjct: 252 IALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDY 311
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQ 559
K A + + I NFL + + Q
Sbjct: 312 KGAIKDYSTVINEYPNFLLGYQYRAQ 337
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D++++ P + A RG + ++ AAI D+ AIQ +P +A+ RG LG
Sbjct: 578 LDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLG 637
Query: 464 ESVEAIQDLSKALEF 478
+ + IQDLSKA E
Sbjct: 638 NNRQGIQDLSKAGEL 652
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
+I + + A+ +PN + R + + +DF +A+EDL+ + ++ Y L
Sbjct: 482 SIDEQTAAIVADPNDVNKRFARSLDFYLVQDFASAIEDLNQAIIIEDHFFPVYFNRALIR 541
Query: 528 SSIGEYKKAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
EY+K E E LKA +++ ++A A+ E L +V+ + F
Sbjct: 542 YKQLEYQKMEKEYDLKAGPGEKSAVKA-----------ADYEMVKRDLDKVIELAPDFVY 590
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY+ RG +L L ++ AI D + +DP + + R + +G R+ +
Sbjct: 591 AYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGI 643
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQ-ILKEDPMYPEALIGRGTARAFQREL 431
++K + S+DF L + +ASAI +Q I+ ED +P R R Q E
Sbjct: 497 VNKRFARSLDFYLVQ--------DFASAIEDLNQAIIIEDHFFP-VYFNRALIRYKQLEY 547
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ ++ +++ P A K AA E V+ +DL K +E P+ + RG
Sbjct: 548 QKMEKEYD--LKAGPGEKSAVK------AADYEMVK--RDLDKVIELAPDFVYAYYNRGN 597
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
V KD+ AA+ D ++LD + AY GL +G
Sbjct: 598 VLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLG 637
>gi|390337018|ref|XP_003724472.1| PREDICTED: uncharacterized protein LOC587791 isoform 1
[Strongylocentrotus purpuratus]
Length = 2128
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 37/247 (14%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+L AI +FT+ ++ +P EA+ +R + A GE + A++D +A PN + +R
Sbjct: 1244 DLTMAIMNFTQTVKLDPQDHEAFFKRAELYEARGEMLLALEDYREATRLMPNMTKAIMKR 1303
Query: 490 GIVNFKF-KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G+ F K++ AA++D S + + N +TY G A + G Y +A AI LD
Sbjct: 1304 GLYQFDMNKNWMAAIKDFSELLVQEPNNALGHTYRGRAFAKQGMYPEAVADLSAAIHLDP 1363
Query: 549 NFLEAW---------GHLTQFYQDLANS--------------------------EKALEC 573
N A+ H Q QDL+ S E A+
Sbjct: 1364 NSSVAFYHRGCLLRKAHPKQALQDLSVSILLDDGHSNGMAFFHRGILYMAMGRHEDAITD 1423
Query: 574 LQQVLYIDKRFSKAYHLRGLL-LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
VL +D+ + A+ GL+ + L + KAI+ ++ + +DP+ + + R YH I
Sbjct: 1424 FDNVLKLDRTIAAAHVNLGLIYMTKLDNYHKAIQKFTNAIKVDPTYVRAIVCRGEAYHKI 1483
Query: 633 GEYREAV 639
E + A+
Sbjct: 1484 HELKNAL 1490
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 5/221 (2%)
Query: 412 PMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
P +A++ RG + + AAI DF+E + P+ RG+A A G EA+
Sbjct: 1294 PNMTKAIMKRGLYQFDMNKNWMAAIKDFSELLVQEPNNALGHTYRGRAFAKQGMYPEAVA 1353
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD--KENKSAYTYLGLALS 528
DLS A+ +PNS+ + RG + + A++DLS + LD N A+ + G+
Sbjct: 1354 DLSAAIHLDPNSSVAFYHRGCL-LRKAHPKQALQDLSVSILLDDGHSNGMAFFHRGILYM 1412
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD-LANSEKALECLQQVLYIDKRFSKA 587
++G ++ A ++LDR A +L Y L N KA++ + +D + +A
Sbjct: 1413 AMGRHEDAITDFDNVLKLDRTIAAAHVNLGLIYMTKLDNYHKAIQKFTNAIKVDPTYVRA 1472
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
RG H + + K A+KD + + + P LR
Sbjct: 1473 IVCRGEAYHKIHELKNALKDFTRAIHLRPDQQHYYMLRGQI 1513
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 2/235 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A F+ +K +P YPEA RG R + + I DF A+ NP +A+ R
Sbjct: 1634 AYEAFNSAIKINPEYPEAYYQRGLTRTRLHQAKG-ILDFNRALALNPKLFQAYLSRAAYY 1692
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G + I + ++A+ +PNS RG + + A++DL ++LD A
Sbjct: 1693 GQRGRYSKGIYNCNQAIRLQPNSVRAYLYRGALKYYISAHALAIKDLCQAIELDTTCSLA 1752
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQL-DRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
Y + + G+Y+KA+ + + L D N L+ + Y + + A + Q +
Sbjct: 1753 YFNRAVCYHTTGDYQKAQRDYGIVLMLGDENSLKVLINRGLMYFAQKDYKNARDDFSQAV 1812
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ R K H GL H L + + A+ SS L +P I+ R + + G
Sbjct: 1813 EVSPRDPKIRHTLGLCCHKLNRLEDAVAIYSSALEANPFFIDAYLGRGNAFMDYG 1867
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 36/284 (12%)
Query: 383 FRLSRGIA--QVNEG--------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+L R IA VN G Y AI F +K DP Y A++ RG A EL+
Sbjct: 1428 LKLDRTIAAAHVNLGLIYMTKLDNYHKAIQKFTNAIKVDPTYVRAIVCRGEAYHKIHELK 1487
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH----- 487
A+ DFT AI P + RGQ + +++L A ++A++ H
Sbjct: 1488 NALKDFTRAIHLRPDQQHYYMLRGQI-------LLRMKNLELASFCVLHAAELAHGLGSS 1540
Query: 488 --ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
++ V +++ A+E LS+ VK+ Y LG +Y+ A ++ KA+
Sbjct: 1541 PTQQAAVQSFLHNYSKAIEVLSSTVKVSP-TAPLYILLGKTEIKAKKYQPAVQSLEKALD 1599
Query: 546 LDRNFLE--AWG-------HLTQF-YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
L + + E +W +L + ++ N KA E + I+ + +AY+ RGL
Sbjct: 1600 LMKPWQERQSWPLEAAEVYYLIGMCHMEIPNVYKAYEAFNSAIKINPEYPEAYYQRGLTR 1659
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L Q K I D + L ++P + RA+ Y G Y + +
Sbjct: 1660 TRLHQ-AKGILDFNRALALNPKLFQAYLSRAAYYGQRGRYSKGI 1702
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 438 FTEAIQSNPSAGEA-WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
TE + ++P RRG LG+ +A DL++A+ EP D R ++
Sbjct: 1149 MTEKLDNDPKPSPFDLTRRGVIYRKLGKLKQAWDDLNRAIALEPLLLDAYWNRHLLYLLK 1208
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ A+EDL++ +K++KE+ AY +S+G+ A + ++LD EA+
Sbjct: 1209 EKPTKALEDLNSILKINKEHVGAYRSRAQIFTSMGDLTMAIMNFTQTVKLDPQDHEAFFK 1268
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH-KKAIKDLSSGLGID 615
+ Y+ ALE ++ + +KA RGL + ++ AIKD S L +
Sbjct: 1269 RAELYEARGEMLLALEDYREATRLMPNMTKAIMKRGLYQFDMNKNWMAAIKDFSELLVQE 1328
Query: 616 PSNIECLYLRASCYHAIGEYREAV 639
P+N R + G Y EAV
Sbjct: 1329 PNNALGHTYRGRAFAKQGMYPEAV 1352
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 101/228 (44%), Gaps = 12/228 (5%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-E 479
+ ++F AI + ++ +P+A + G+ + A+Q L KAL+ +
Sbjct: 1544 QAAVQSFLHNYSKAIEVLSSTVKVSPTA-PLYILLGKTEIKAKKYQPAVQSLEKALDLMK 1602
Query: 480 P---------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
P +A++ + G+ + + + A E ++ +K++ E AY GL + +
Sbjct: 1603 PWQERQSWPLEAAEVYYLIGMCHMEIPNVYKAYEAFNSAIKINPEYPEAYYQRGLTRTRL 1662
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+ K + + +A+ L+ +A+ +Y K + Q + + +AY
Sbjct: 1663 HQAKGILDFN-RALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQAIRLQPNSVRAYLY 1721
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
RG L + + H AIKDL + +D + + RA CYH G+Y++A
Sbjct: 1722 RGALKYYISAHALAIKDLCQAIELDTTCSLAYFNRAVCYHTTGDYQKA 1769
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTA--------------RAFQREL-------------- 431
A++I+ L+ +P + +A +GRG A R +QR +
Sbjct: 1838 AVAIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVLLARRDYQRSIILEPECLVGRVNLA 1897
Query: 432 ---------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
+ A + FT ++ NP+ A + R + + A+ D++ AL S
Sbjct: 1898 YNMQISGSYKIAWNLFTTCLKLNPNYRPALEGRAIVSLQMSDPYAALLDMNNALRIG-KS 1956
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A++ RG+VN +D +A+ D A +K DK AY S ++ +A + + K
Sbjct: 1957 AELFVNRGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQFMQALQFYDK 2016
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
++L+ + A + +S+ ALE + + + + Y RG L L +++
Sbjct: 2017 TLELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGNLYTSLKRYQ 2076
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A KD S L + P + RA +G EA+
Sbjct: 2077 LAEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAI 2113
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 15/225 (6%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQI 407
EA + TR+ ++K I +DF LSR G+Y+ I +Q
Sbjct: 1650 EAYYQRGLTRTRLHQAKGI-LDFNRALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQA 1708
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ P A + RG + + AI D +AI+ + + A+ R G+ +
Sbjct: 1709 IRLQPNSVRAYLYRGALKYYISAHALAIKDLCQAIELDTTCSLAYFNRAVCYHTTGDYQK 1768
Query: 468 AIQDLSKALEF-EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
A +D L + NS +L RG++ F KD+ A +D S V++ + LGL
Sbjct: 1769 AQRDYGIVLMLGDENSLKVLINRGLMYFAQKDYKNARDDFSQAVEVSPRDPKIRHTLGLC 1828
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ + A + A++ + F++A+ + D + + L
Sbjct: 1829 CHKLNRLEDAVAIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVL 1873
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 7/165 (4%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E + RG F ++ E+A+ DF AI+ + S A+ + + ++A+Q K
Sbjct: 1958 ELFVNRGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQFMQALQFYDKT 2017
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
LE + L R I +D A+ED VKL + Y G +S+ Y+
Sbjct: 2018 LELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGNLYTSLKRYQL 2077
Query: 536 AEEAHLKAIQLD-------RNFLEAWGHLTQFYQDLANSEKALEC 573
AE+ + +A+ L + E G L + + +A+ ++A+E
Sbjct: 2078 AEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAIADYKRAIEI 2122
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 11/178 (6%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
RI KS + V+ RG+ + SA+ F +K+D Y A R+
Sbjct: 1952 RIGKSAELFVN----RGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQF 2007
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+ + + ++ N S A R + +S A++D KA++ P SA + RG
Sbjct: 2008 MQALQFYDKTLELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGN 2067
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYT-------YLGLALSSIGEYKKAEEAHLK 542
+ K + A +D S + L ++ + LG +I +YK+A E K
Sbjct: 2068 LYTSLKRYQLAEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAIADYKRAIEIQSK 2125
>gi|390337020|ref|XP_792593.3| PREDICTED: uncharacterized protein LOC587791 isoform 2
[Strongylocentrotus purpuratus]
Length = 2128
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 37/247 (14%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+L AI +FT+ ++ +P EA+ +R + A GE + A++D +A PN + +R
Sbjct: 1244 DLTMAIMNFTQTVKLDPQDHEAFFKRAELYEARGEMLLALEDYREATRLMPNMTKAIMKR 1303
Query: 490 GIVNFKF-KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G+ F K++ AA++D S + + N +TY G A + G Y +A AI LD
Sbjct: 1304 GLYQFDMNKNWMAAIKDFSELLVQEPNNALGHTYRGRAFAKQGMYPEAVADLSAAIHLDP 1363
Query: 549 NFLEAW---------GHLTQFYQDLANS--------------------------EKALEC 573
N A+ H Q QDL+ S E A+
Sbjct: 1364 NSSVAFYHRGCLLRKAHPKQALQDLSVSILLDDGHSNGMAFFHRGILYMAMGRHEDAITD 1423
Query: 574 LQQVLYIDKRFSKAYHLRGLL-LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
VL +D+ + A+ GL+ + L + KAI+ ++ + +DP+ + + R YH I
Sbjct: 1424 FDNVLKLDRTIAAAHVNLGLIYMTKLDNYHKAIQKFTNAIKVDPTYVRAIVCRGEAYHKI 1483
Query: 633 GEYREAV 639
E + A+
Sbjct: 1484 HELKNAL 1490
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 5/221 (2%)
Query: 412 PMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
P +A++ RG + + AAI DF+E + P+ RG+A A G EA+
Sbjct: 1294 PNMTKAIMKRGLYQFDMNKNWMAAIKDFSELLVQEPNNALGHTYRGRAFAKQGMYPEAVA 1353
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD--KENKSAYTYLGLALS 528
DLS A+ +PNS+ + RG + + A++DLS + LD N A+ + G+
Sbjct: 1354 DLSAAIHLDPNSSVAFYHRGCL-LRKAHPKQALQDLSVSILLDDGHSNGMAFFHRGILYM 1412
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD-LANSEKALECLQQVLYIDKRFSKA 587
++G ++ A ++LDR A +L Y L N KA++ + +D + +A
Sbjct: 1413 AMGRHEDAITDFDNVLKLDRTIAAAHVNLGLIYMTKLDNYHKAIQKFTNAIKVDPTYVRA 1472
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
RG H + + K A+KD + + + P LR
Sbjct: 1473 IVCRGEAYHKIHELKNALKDFTRAIHLRPDQQHYYMLRGQI 1513
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 2/235 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A F+ +K +P YPEA RG R + + I DF A+ NP +A+ R
Sbjct: 1634 AYEAFNSAIKINPEYPEAYYQRGLTRTRLHQAKG-ILDFNRALALNPKLFQAYLSRAAYY 1692
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G + I + ++A+ +PNS RG + + A++DL ++LD A
Sbjct: 1693 GQRGRYSKGIYNCNQAIRLQPNSVRAYLYRGALKYYISAHALAIKDLCQAIELDTTCSLA 1752
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQL-DRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
Y + + G+Y+KA+ + + L D N L+ + Y + + A + Q +
Sbjct: 1753 YFNRAVCYHTTGDYQKAQRDYGIVLMLGDENSLKVLINRGLMYFAQKDYKNARDDFSQAV 1812
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ R K H GL H L + + A+ SS L +P I+ R + + G
Sbjct: 1813 EVSPRDPKIRHTLGLCCHKLNRLEDAVAIYSSALEANPFFIDAYLGRGNAFMDYG 1867
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 36/284 (12%)
Query: 383 FRLSRGIA--QVNEG--------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+L R IA VN G Y AI F +K DP Y A++ RG A EL+
Sbjct: 1428 LKLDRTIAAAHVNLGLIYMTKLDNYHKAIQKFTNAIKVDPTYVRAIVCRGEAYHKIHELK 1487
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH----- 487
A+ DFT AI P + RGQ + +++L A ++A++ H
Sbjct: 1488 NALKDFTRAIHLRPDQQHYYMLRGQI-------LLRMKNLELASFCVLHAAELAHGLGSS 1540
Query: 488 --ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
++ V +++ A+E LS+ VK+ Y LG +Y+ A ++ KA+
Sbjct: 1541 PTQQAAVQSFLHNYSKAIEVLSSTVKVSP-TAPLYILLGKTEIKAKKYQPAVQSLEKALD 1599
Query: 546 LDRNFLE--AWG-------HLTQF-YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
L + + E +W +L + ++ N KA E + I+ + +AY+ RGL
Sbjct: 1600 LMKPWQERQSWPLEAAEVYYLIGMCHMEIPNVYKAYEAFNSAIKINPEYPEAYYQRGLTR 1659
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L Q K I D + L ++P + RA+ Y G Y + +
Sbjct: 1660 TRLHQ-AKGILDFNRALALNPKLFQAYLSRAAYYGQRGRYSKGI 1702
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 438 FTEAIQSNPSAGEA-WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
TE + ++P RRG LG+ +A DL++A+ EP D R ++
Sbjct: 1149 MTEKLDNDPKPSPFDLTRRGVIYRKLGKLKQAWDDLNRAIALEPLLLDAYWNRHLLYLLK 1208
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ A+EDL++ +K++KE+ AY +S+G+ A + ++LD EA+
Sbjct: 1209 EKPTKALEDLNSILKINKEHVGAYRSRAQIFTSMGDLTMAIMNFTQTVKLDPQDHEAFFK 1268
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH-KKAIKDLSSGLGID 615
+ Y+ ALE ++ + +KA RGL + ++ AIKD S L +
Sbjct: 1269 RAELYEARGEMLLALEDYREATRLMPNMTKAIMKRGLYQFDMNKNWMAAIKDFSELLVQE 1328
Query: 616 PSNIECLYLRASCYHAIGEYREAV 639
P+N R + G Y EAV
Sbjct: 1329 PNNALGHTYRGRAFAKQGMYPEAV 1352
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 101/228 (44%), Gaps = 12/228 (5%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-E 479
+ ++F AI + ++ +P+A + G+ + A+Q L KAL+ +
Sbjct: 1544 QAAVQSFLHNYSKAIEVLSSTVKVSPTA-PLYILLGKTEIKAKKYQPAVQSLEKALDLMK 1602
Query: 480 P---------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
P +A++ + G+ + + + A E ++ +K++ E AY GL + +
Sbjct: 1603 PWQERQSWPLEAAEVYYLIGMCHMEIPNVYKAYEAFNSAIKINPEYPEAYYQRGLTRTRL 1662
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+ K + + +A+ L+ +A+ +Y K + Q + + +AY
Sbjct: 1663 HQAKGILDFN-RALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQAIRLQPNSVRAYLY 1721
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
RG L + + H AIKDL + +D + + RA CYH G+Y++A
Sbjct: 1722 RGALKYYISAHALAIKDLCQAIELDTTCSLAYFNRAVCYHTTGDYQKA 1769
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTA--------------RAFQREL-------------- 431
A++I+ L+ +P + +A +GRG A R +QR +
Sbjct: 1838 AVAIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVLLARRDYQRSIILEPECLVGRVNLA 1897
Query: 432 ---------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
+ A + FT ++ NP+ A + R + + A+ D++ AL S
Sbjct: 1898 YNMQISGSYKIAWNLFTTCLKLNPNYRPALEGRAIVSLQMSDPYAALLDMNNALRIG-KS 1956
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A++ RG+VN +D +A+ D A +K DK AY S ++ +A + + K
Sbjct: 1957 AELFVNRGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQFMQALQFYDK 2016
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
++L+ + A + +S+ ALE + + + + Y RG L L +++
Sbjct: 2017 TLELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGNLYTSLKRYQ 2076
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A KD S L + P + RA +G EA+
Sbjct: 2077 LAEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAI 2113
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 15/225 (6%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQI 407
EA + TR+ ++K I +DF LSR G+Y+ I +Q
Sbjct: 1650 EAYYQRGLTRTRLHQAKGI-LDFNRALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQA 1708
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ P A + RG + + AI D +AI+ + + A+ R G+ +
Sbjct: 1709 IRLQPNSVRAYLYRGALKYYISAHALAIKDLCQAIELDTTCSLAYFNRAVCYHTTGDYQK 1768
Query: 468 AIQDLSKALEF-EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
A +D L + NS +L RG++ F KD+ A +D S V++ + LGL
Sbjct: 1769 AQRDYGIVLMLGDENSLKVLINRGLMYFAQKDYKNARDDFSQAVEVSPRDPKIRHTLGLC 1828
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ + A + A++ + F++A+ + D + + L
Sbjct: 1829 CHKLNRLEDAVAIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVL 1873
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 7/165 (4%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E + RG F ++ E+A+ DF AI+ + S A+ + + ++A+Q K
Sbjct: 1958 ELFVNRGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQFMQALQFYDKT 2017
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
LE + L R I +D A+ED VKL + Y G +S+ Y+
Sbjct: 2018 LELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGNLYTSLKRYQL 2077
Query: 536 AEEAHLKAIQLD-------RNFLEAWGHLTQFYQDLANSEKALEC 573
AE+ + +A+ L + E G L + + +A+ ++A+E
Sbjct: 2078 AEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAIADYKRAIEI 2122
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 11/178 (6%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
RI KS + V+ RG+ + SA+ F +K+D Y A R+
Sbjct: 1952 RIGKSAELFVN----RGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQF 2007
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+ + + ++ N S A R + +S A++D KA++ P SA + RG
Sbjct: 2008 MQALQFYDKTLELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGN 2067
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYT-------YLGLALSSIGEYKKAEEAHLK 542
+ K + A +D S + L ++ + LG +I +YK+A E K
Sbjct: 2068 LYTSLKRYQLAEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAIADYKRAIEIQSK 2125
>gi|296109346|ref|YP_003616295.1| TPR repeat-containing protein [methanocaldococcus infernus ME]
gi|295434160|gb|ADG13331.1| TPR repeat-containing protein [Methanocaldococcus infernus ME]
Length = 534
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 20/198 (10%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ NEG+Y AI FD+ +K DP P A + + E AI F +AI+ +P
Sbjct: 9 KGLKYYNEGRYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDP 68
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ AW + + L +AI+ KA++ +PN+ + + +K + + A+E
Sbjct: 69 NNPAAWYYKADSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECF 128
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+KLD N +A+ Y G+ L+ +G++++ + + KA L
Sbjct: 129 DKAIKLDPNNPAAWYYKGIILAKLGKHEEESKKYEKA--------------------LDK 168
Query: 567 SEKALECLQQVLYIDKRF 584
++A+EC ++VL ID F
Sbjct: 169 YKEAIECFKKVLEIDPNF 186
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G +AI+ KA++ +PN+ + + +K + + A+E +KLD N +A+ Y
Sbjct: 17 GRYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDPNNPAAWYY 76
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
+L + Y+KA E KAI+LD N AW + L EKA+EC + + +D
Sbjct: 77 KADSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDP 136
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
A++ +G++L LG+H++ K L IEC
Sbjct: 137 NNPAAWYYKGIILAKLGKHEEESKKYEKALDKYKEAIECF 176
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+E+G+ + + A+E +KLD N +A+ Y +L + Y+KA E KAI+L
Sbjct: 7 YEKGLKYYNEGRYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAIKL 66
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
D N AW + L EKA+EC + + +D A++ + L+ L +++KAI+
Sbjct: 67 DPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIE 126
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
+ +DP+N Y + +G++ E
Sbjct: 127 CFDKAIKLDPNNPAAWYYKGIILAKLGKHEE 157
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%)
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
GL + G Y+KA E KAI+LD N AW + L EKA+EC + + +D
Sbjct: 10 GLKYYNEGRYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDPN 69
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A++ + L+ L +++KAI+ + +DP+N Y +A + + Y +A+
Sbjct: 70 NPAAWYYKADSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKADSLYKLERYEKAI 125
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 8 DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSY 67
DS Y+L + K I D+ +++D +A + + L L + KAI D +
Sbjct: 45 DSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKAD--SLYKLERYEKAIECFDKAIKL-- 100
Query: 68 EIQDICNRAFCYSQ------LELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
D N A Y + LE ++ I DKA++LDP A+ KG + LG+ EE
Sbjct: 101 ---DPNNPAAWYYKADSLYKLERYEKAIECFDKAIKLDPNNPAAWYYKGIILAKLGKHEE 157
Query: 122 ALSVWEKGYEHALHQSAD----LKQFLELE 147
K YE AL + + K+ LE++
Sbjct: 158 E----SKKYEKALDKYKEAIECFKKVLEID 183
>gi|423314011|ref|ZP_17291946.1| hypothetical protein HMPREF1058_02558 [Bacteroides vulgatus
CL09T03C04]
gi|392683609|gb|EIY76943.1| hypothetical protein HMPREF1058_02558 [Bacteroides vulgatus
CL09T03C04]
Length = 669
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P + RG A+ + + A SD +EAI+ NP A++ RG
Sbjct: 39 YVLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRG 98
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR AI+D +KALEF+P + + H + + +D+ A DL + +
Sbjct: 99 LARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRY 158
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------------------- 556
AY G + AE+ KAI++DR + W
Sbjct: 159 TKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADFDH 218
Query: 557 ----------------LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
L +++Q+ N A+ L ID ++ RGLL +G
Sbjct: 219 AIRLSTRNSGVYINRALARYHQN--NLRGAMSDYDIALDIDPNNFIGHYNRGLLRAQVGD 276
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D + + ++P N+ ++ R G+Y+ A+
Sbjct: 277 DNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAI 315
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SR I ++ + +Y A + FD ++ I R AR Q L A+SD+ A+ +
Sbjct: 198 SRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDID 257
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AIQD + +E EP++ + RG++ + D+ A++D
Sbjct: 258 PNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKD 317
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
S + Y Y A IG+ K A+ K + QLD+
Sbjct: 318 YSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVLKAQLDK 362
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+ ++ + Y A + D+++ P Y +A + RG Q++ AA DF +AI+ +
Sbjct: 132 ALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRY 191
Query: 448 AGEAW----------KRRGQARAALGESVE------------------------AIQDLS 473
+ W +R A A ++ A+ D
Sbjct: 192 DADTWASRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYD 251
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
AL+ +PN+ + RG++ + D N A++D + ++++ +N A GL L G+Y
Sbjct: 252 IALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDY 311
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQ 559
K A + + I NFL + + Q
Sbjct: 312 KGAIKDYSTVINEYPNFLLGYQYRAQ 337
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D++++ P + A RG + ++ AAI D+ AIQ +P +A+ RG LG
Sbjct: 578 LDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLG 637
Query: 464 ESVEAIQDLSKALEF 478
+ + IQDLSKA E
Sbjct: 638 NNRQGIQDLSKAGEL 652
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
+I + + A+ +PN + R + + +DF +A+EDL+ + ++ Y L
Sbjct: 482 SIDEQTAAIVADPNDVNKRFARSLDFYLVQDFASAIEDLNQAIIIEDHFFPVYFNRALIR 541
Query: 528 SSIGEYKKAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
EY+K E E LKA +++ ++A A+ E L +V+ + F
Sbjct: 542 YKQLEYQKMEKEYDLKAGLGEKSAVKA-----------ADYEMVKRDLDKVIELAPDFVY 590
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY+ RG +L L ++ AI D + +DP + + R + +G R+ +
Sbjct: 591 AYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGI 643
>gi|212691281|ref|ZP_03299409.1| hypothetical protein BACDOR_00772 [Bacteroides dorei DSM 17855]
gi|237712290|ref|ZP_04542771.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|212666513|gb|EEB27085.1| tetratricopeptide repeat protein [Bacteroides dorei DSM 17855]
gi|229453611|gb|EEO59332.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 669
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P + RG A+ + + A SD +EAI+ NP A++ RG
Sbjct: 39 YVLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRG 98
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR AI+D +KALEF+P + + H + + +D+ A DL + +
Sbjct: 99 LARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRY 158
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------------------- 556
AY G + AE+ KAI++DR + W
Sbjct: 159 TKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADFDH 218
Query: 557 ----------------LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
L +++Q+ N A+ L ID ++ RGLL +G
Sbjct: 219 AIRLSTRNSGVYINRALARYHQN--NLRGAMSDYDIALDIDPNNFIGHYNRGLLRAQVGD 276
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D + + ++P N+ ++ R G+Y+ A+
Sbjct: 277 DNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAI 315
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SR I ++ + +Y A + FD ++ I R AR Q L A+SD+ A+ +
Sbjct: 198 SRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDID 257
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AIQD + +E EP++ + RG++ + D+ A++D
Sbjct: 258 PNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKD 317
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
S + Y Y A IG+ K A+ K + QLD+
Sbjct: 318 YSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVLKAQLDK 362
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+ ++ + Y A + D+++ P Y +A + RG Q++ AA DF +AI+ +
Sbjct: 132 ALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRY 191
Query: 448 AGEAW----------KRRGQARAALGESVE------------------------AIQDLS 473
+ W +R A A ++ A+ D
Sbjct: 192 DADTWASRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYD 251
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
AL+ +PN+ + RG++ + D N A++D + ++++ +N A GL L G+Y
Sbjct: 252 IALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDY 311
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQ 559
K A + + I NFL + + Q
Sbjct: 312 KGAIKDYSTVINEYPNFLLGYQYRAQ 337
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D++++ P + A RG + ++ AAI D+ AIQ +P +A+ RG LG
Sbjct: 578 LDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLG 637
Query: 464 ESVEAIQDLSKALEF 478
+ + IQDLSKA E
Sbjct: 638 NNRQGIQDLSKAGEL 652
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 12/173 (6%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
+I + + A+ +PN+ + R + + +DF +A+EDL+ + ++ Y L
Sbjct: 482 SIDEQTAAIVADPNNVNKRFARSLDFYLVQDFASAIEDLNQAIIIEGNFFPVYFNRALIR 541
Query: 528 SSIGEYKKAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
EY+K E E LKA +++ ++A A+ E L +V+ + F
Sbjct: 542 YKQLEYQKMEKEYDLKANPGEKSAVKA-----------ADYEMVKRDLDKVIELAPDFVY 590
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AY+ RG +L L ++ AI D + +DP + + R + +G R+ +
Sbjct: 591 AYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGI 643
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 109/572 (19%), Positives = 222/572 (38%), Gaps = 78/572 (13%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
N A C + E +K D DK + + P +AY+++G + K++ EK + A
Sbjct: 130 NMALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRG----EVDLKQKDTLAAEKDFGKA 185
Query: 134 L---HQSADL---KQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSE 187
+ AD + L L+ Q R E D +++ L+ SG+ N ++
Sbjct: 186 IEIDRYDADTWASRAILRLQ-------QQRYKDAEADFDHAIR-LSTRNSGVYINRALAR 237
Query: 188 TSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSD-------------EAKGGSSV 234
+N+ + + D + D+ ++ L + E + + +
Sbjct: 238 YHQNNLRGAMSDYDI-ALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMM 296
Query: 235 PVSKSGLHIN------GKLRE----VSENHNGSSDGSKSTHASRDASEINRQSSDDFDIC 284
+ GL ++ G +++ ++E N A R ++ +D+F +
Sbjct: 297 AIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVL 356
Query: 285 NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
+DK + + + + + T + + SD N +Y K ++DN+ E
Sbjct: 357 KAQLDKQNGVDPNKQTADNTENNKTRKKSDK--------NMNNYRKIVVADNEEG---EE 405
Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
+ K ++ + + N + F +T K + + I +N K I
Sbjct: 406 KYKSDYRGRVQDKNVNIVPQ-PMFVLTYYEKHDDVKRQVNYYKFIETLNNQKVLPGRLII 464
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
+E P+ E + F A+I + T AI ++P+ R + +
Sbjct: 465 TN--EEAPLTEEQ-----ATKHF-----ASIDEQTAAIVADPNNVNKRFARSLDFYLVQD 512
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
AI+DL++A+ E N + R ++ +K ++ ++ +K + KSA
Sbjct: 513 FASAIEDLNQAIIIEGNFFPVYFNRALIRYKQLEYQKMEKEYD--LKANPGEKSA----- 565
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
+Y+ + K I+L +F+ A+ + L + A+ + + +D +F
Sbjct: 566 ---VKAADYEMVKRDLDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKF 622
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
+ AY RGL LG +++ I+DLS LG+
Sbjct: 623 ADAYFNRGLTHIFLGNNRQGIQDLSKAGELGL 654
>gi|404318522|ref|ZP_10966455.1| hypothetical protein OantC_10032 [Ochrobactrum anthropi CTS-325]
Length = 285
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D+++AIQ N
Sbjct: 76 RGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYRYMGDSTKAVQDYSKAIQLNS 135
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG G +A+ D ++A+ + H RG++ A+ED
Sbjct: 136 QYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDF 195
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+ +
Sbjct: 196 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVYEHNGD 255
Query: 567 SEKALECLQQVLYIDKRFSKA 587
KA + + +D ++ A
Sbjct: 256 KAKAANSYSRAVQLDPKYQPA 276
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V
Sbjct: 56 ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALV-- 113
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
Y Y+G + ++ +Y KA IQL+ + A+
Sbjct: 114 -------------------------YRYMGDSTKAVQDYSKA-------IQLNSQYDAAY 141
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
Y+ ++AL Q + + +AYH RGL+ GQHK+AI+D S + +
Sbjct: 142 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAISL 201
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
+ + E R Y A+G+Y A
Sbjct: 202 NSTAPEPYNGRGISYVALGDYDNAF 226
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
IS +++ +P PE RG+A + A+ DF +AI NP+ +A+ R
Sbjct: 56 ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYR 115
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+G+S +A+QD SKA++ RG V + + A+ D + + L + AY
Sbjct: 116 YMGDSTKAVQDYSKAIQLNSQYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAY 175
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL + G++K+A E KAI L+ E + Y L + + A + + +
Sbjct: 176 HNRGLIYQAKGQHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 235
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
D+ ++++ + L+ G KA S + +DP
Sbjct: 236 DQNIAESWANQALVYEHNGDKAKAANSYSRAVQLDP 271
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG G+ A+S F+Q + A RG + + + AI DF++AI
Sbjct: 142 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAISL 201
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N +A E + RG + ALG+ A D + A+ + N A+ + +V D A
Sbjct: 202 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVYEHNGDKAKAAN 261
Query: 505 DLSACVKLDKENKSA 519
S V+LD + + A
Sbjct: 262 SYSRAVQLDPKYQPA 276
>gi|434388181|ref|YP_007098792.1| trypsin-like serine protease with C-terminal PDZ domain
[Chamaesiphon minutus PCC 6605]
gi|428019171|gb|AFY95265.1| trypsin-like serine protease with C-terminal PDZ domain
[Chamaesiphon minutus PCC 6605]
Length = 516
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 35/254 (13%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+VDF L G+ + N G +I ++ +K +P Y +A I R TA + + AAISD
Sbjct: 266 AVDFFLI-GVDRFNRGNLGGSIEAMNEAIKLNPRYTKAYIARATANFMSKRIGAAISDVD 324
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
AIQS P++G A+ + + G+ EA+ ++A+ P SA + + +G+V + +++
Sbjct: 325 LAIQSEPTSGLAYAGKCFFLSEFGKHGEALGACNRAVSLAPKSAMVYNVKGLVGLRLRNY 384
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ A DL ++LD K Y Y LA+ + A+ L AI L R +
Sbjct: 385 SVAAADLERSIELDP--KLYYAYNNLAI-----VRNAQRNTLAAINLAR----------R 427
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
Q S L Q+L +K +++ + +L+ LG +P
Sbjct: 428 AVQIAPKSPATRALLGQLLVANK-----------------DYRQGLMELNMALGWNPRMT 470
Query: 620 ECLYLRASCYHAIG 633
E RA AIG
Sbjct: 471 EAYKARAVANRAIG 484
>gi|420248597|ref|ZP_14751921.1| lipoprotein NlpI, contains TPR repeats [Burkholderia sp. BT03]
gi|398067510|gb|EJL59012.1| lipoprotein NlpI, contains TPR repeats [Burkholderia sp. BT03]
Length = 561
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 4/257 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RGIA+ Y +AI + + + DP AL+ RG AR + + E AI+DFT ++Q
Sbjct: 102 VDRGIAKQQLADYDAAIDDYSRAIGIDPDDAIALMNRGYARLHKEQFELAIADFTRSVQL 161
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + R A + V A+ D A EP + ERGIV + F+ A+E
Sbjct: 162 NPRLSVTYTGRAFAYRNTKQYVAALADYDSAEAIEPLPPNDQVERGIVLAELHRFSEAIE 221
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQ 562
+ + D N A Y A + A + A+ + DR + +
Sbjct: 222 RYNIVLAQDPNNYLALIYRAFAFEKQNQVDLAIRDYTTALAVSSDRELTHRMRGIA--FD 279
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
++A+ + + + + ++ Y LR Q+++A +DL++ +DP N++
Sbjct: 280 KAGRYDEAIADFSEAIRMAPQSARPYVLRARTYRHARQYEQAFEDLATAQRLDPVNLDVY 339
Query: 623 YLRASCYHAIGEYREAV 639
+ RA + G + EAV
Sbjct: 340 WDRAQLWEQAGNFAEAV 356
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 112/267 (41%), Gaps = 5/267 (1%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
++S+ ++ RLS R A N +Y +A++ +D +P+ P + RG A
Sbjct: 156 TRSVQLNPRLSVTYTGRAFAYRNTKQYVAALADYDSAEAIEPLPPNDQVERGIVLAELHR 215
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
AI + + +P+ A R A + AI+D + AL + RG
Sbjct: 216 FSEAIERYNIVLAQDPNNYLALIYRAFAFEKQNQVDLAIRDYTTALAVSSDRELTHRMRG 275
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
I K ++ A+ D S +++ ++ Y +Y++A E A +LD
Sbjct: 276 IAFDKAGRYDEAIADFSEAIRMAPQSARPYVLRARTYRHARQYEQAFEDLATAQRLDPVN 335
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
L+ + Q ++ N +A++ +++ I A+ R L +G++ A+ D +
Sbjct: 336 LDVYWDRAQLWEQAGNFAEAVDDYTRIIRIHPLEVDAWMYRADNLTIVGRYDDALSDFDT 395
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYRE 637
+DP++ L +A + G + E
Sbjct: 396 AQRLDPTSPYLLLGKARFFFYRGRWAE 422
>gi|119358297|ref|YP_912941.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
gi|119355646|gb|ABL66517.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
DSM 266]
Length = 243
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 92/164 (56%)
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
Q+++G Y SAI+ F + ++ DP EA RG+A+A + AI DF+ AI+ +P+A E
Sbjct: 37 QLDKGDYKSAITFFTKAIELDPQSIEAYNSRGSAKAKSGDYPDAIEDFSIAIELDPNAAE 96
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ R A+A++ + A +D A++ +P + + RG++ + ++ A+++ + +
Sbjct: 97 AYYNRAAAKASIEDHKGAREDRKMAMKLDPKLSLVYDNRGLIKYLRDNYQGAIDNFTTAL 156
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+LD ++ AY + G A + +Y+ A E + A+ D + +
Sbjct: 157 ELDPKSAIAYKHRGYAKHEMKDYQGAIEDYTSALTFDAKLADVY 200
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 88/178 (49%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ ++AI+ FT+AI+ +P + EA+ RG A+A G+ +AI+D S A+E +PN+A+ + R
Sbjct: 42 DYKSAITFFTKAIELDPQSIEAYNSRGSAKAKSGDYPDAIEDFSIAIELDPNAAEAYYNR 101
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+D A ED +KLD + Y GL Y+ A + A++LD
Sbjct: 102 AAAKASIEDHKGAREDRKMAMKLDPKLSLVYDNRGLIKYLRDNYQGAIDNFTTALELDPK 161
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
A+ H ++ + + A+E L D + + Y R L + ++ AIKD
Sbjct: 162 SAIAYKHRGYAKHEMKDYQGAIEDYTSALTFDAKLADVYWNRALAKSQVEDNEGAIKD 219
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+ +A+ + ++LD ++ AY G A + G+Y A E AI+LD N EA+ +
Sbjct: 42 DYKSAITFFTKAIELDPQSIEAYNSRGSAKAKSGDYPDAIEDFSIAIELDPNAAEAYYNR 101
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ + + A E + + +D + S Y RGL+ + ++ AI + ++ L +DP
Sbjct: 102 AAAKASIEDHKGAREDRKMAMKLDPKLSLVYDNRGLIKYLRDNYQGAIDNFTTALELDPK 161
Query: 618 NIECLYLRASCYHAIGEYREAV 639
+ R H + +Y+ A+
Sbjct: 162 SAIAYKHRGYAKHEMKDYQGAI 183
>gi|300867449|ref|ZP_07112103.1| putative TPR repeat [Oscillatoria sp. PCC 6506]
gi|300334564|emb|CBN57271.1| putative TPR repeat [Oscillatoria sp. PCC 6506]
Length = 715
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+YA A++ +DQ L E RG + AI+ + +AI N E W R
Sbjct: 471 RYAEAVASYDQALTIRADRYETWYNRGNMLWRLQRYSDAIASYDKAIALNADKYEVWYNR 530
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L + EAI +A+ +PN +I H RG+ + ++ A+ + + +
Sbjct: 531 GAVLGKLQQYEEAIASYDRAIALQPNDHEIWHNRGVAFGRLSEYVEAIASYEQAIAIQPQ 590
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G + + EY++A A+ +AI + +AW H + +L E+A+ C
Sbjct: 591 CYEAWFGKGETFAKLQEYEEAIAAYDRAIAIKPESYDAWRHRGTAFSELKQYEEAMICYD 650
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + I ++A+ RG LL L Q +A+ LS + I
Sbjct: 651 KAIAIKPDNAQAWRDRGALLSELKQDSEAVASLSQAISI 689
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 121/317 (38%), Gaps = 34/317 (10%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
E+ EA ++ V +S+ D + +G A EG+Y A+ F++ + + E
Sbjct: 296 ESQLEANNSRSNVVPFQKPQESLIADDYVKQGEALYLEGRYQEALVSFEKAILMNADIDE 355
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA------------------ 458
A RG + LE AI+ + +AI N EAW RG
Sbjct: 356 AWYNRGNVLVKVQRLEEAIACYDQAIGLNREYYEAWYNRGNVLMRLQRYEEAAAAYDQAI 415
Query: 459 ------------RAA----LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
RAA L EAI KAL + + ++ H R + K + + A
Sbjct: 416 ALKPEEYGPWHNRAAAMGRLQRYQEAIASYEKALSIKSDDPEVWHSRAAMLGKLQRYAEA 475
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
V + + + + G L + Y A ++ KAI L+ + E W +
Sbjct: 476 VASYDQALTIRADRYETWYNRGNMLWRLQRYSDAIASYDKAIALNADKYEVWYNRGAVLG 535
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
L E+A+ + + + + +H RG+ L ++ +AI + I P E
Sbjct: 536 KLQQYEEAIASYDRAIALQPNDHEIWHNRGVAFGRLSEYVEAIASYEQAIAIQPQCYEAW 595
Query: 623 YLRASCYHAIGEYREAV 639
+ + + + EY EA+
Sbjct: 596 FGKGETFAKLQEYEEAI 612
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y+ AI+ +D+ + + E RG ++ E AI+ + AI P+ E W R
Sbjct: 505 RYSDAIASYDKAIALNADKYEVWYNRGAVLGKLQQYEEAIASYDRAIALQPNDHEIWHNR 564
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A L E VEAI +A+ +P + +G K +++ A+ + + E
Sbjct: 565 GVAFGRLSEYVEAIASYEQAIAIQPQCYEAWFGKGETFAKLQEYEEAIAAYDRAIAIKPE 624
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ + G A S + +Y++A + KAI + + +AW +L +A+ L
Sbjct: 625 SYDAWRHRGTAFSELKQYEEAMICYDKAIAIKPDNAQAWRDRGALLSELKQDSEAVASLS 684
Query: 576 QVLYIDK 582
Q + I +
Sbjct: 685 QAISIQQ 691
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A +Y AI+ ++Q + P EA G+G A +E E AI+ + AI
Sbjct: 563 NRGVAFGRLSEYVEAIASYEQAIAIQPQCYEAWFGKGETFAKLQEYEEAIAAYDRAIAIK 622
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + +AW+ RG A + L + EA+ KA+ +P++A +RG + + K + AV
Sbjct: 623 PESYDAWRHRGTAFSELKQYEEAMICYDKAIAIKPDNAQAWRDRGALLSELKQDSEAVAS 682
Query: 506 LSACVKLDK 514
LS + + +
Sbjct: 683 LSQAISIQQ 691
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 97/244 (39%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +++ L PE R + A++ + +A+ E W R
Sbjct: 437 RYQEAIASYEKALSIKSDDPEVWHSRAAMLGKLQRYAEAVASYDQALTIRADRYETWYNR 496
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L +AI KA+ + ++ + RG V K + + A+ + L
Sbjct: 497 GNMLWRLQRYSDAIASYDKAIALNADKYEVWYNRGAVLGKLQQYEEAIASYDRAIALQPN 556
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ + G+A + EY +A ++ +AI + EAW + + L E+A+
Sbjct: 557 DHEIWHNRGVAFGRLSEYVEAIASYEQAIAIQPQCYEAWFGKGETFAKLQEYEEAIAAYD 616
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + I A+ RG L Q+++A+ + I P N + R + + +
Sbjct: 617 RAIAIKPESYDAWRHRGTAFSELKQYEEAMICYDKAIAIKPDNAQAWRDRGALLSELKQD 676
Query: 636 REAV 639
EAV
Sbjct: 677 SEAV 680
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 95/220 (43%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R A + + AI+ + +A+ E W R L EA+ +AL
Sbjct: 428 RAAAMGRLQRYQEAIASYEKALSIKSDDPEVWHSRAAMLGKLQRYAEAVASYDQALTIRA 487
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + + RG + ++ + ++ A+ + L+ + + G L + +Y++A ++
Sbjct: 488 DRYETWYNRGNMLWRLQRYSDAIASYDKAIALNADKYEVWYNRGAVLGKLQQYEEAIASY 547
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI L N E W + + L+ +A+ +Q + I + +A+ +G L +
Sbjct: 548 DRAIALQPNDHEIWHNRGVAFGRLSEYVEAIASYEQAIAIQPQCYEAWFGKGETFAKLQE 607
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+++AI + I P + + R + + + +Y EA+I
Sbjct: 608 YEEAIAAYDRAIAIKPESYDAWRHRGTAFSELKQYEEAMI 647
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI+ +D+ + P E RG A E AI+ + +AI P EAW +
Sbjct: 539 QYEEAIASYDRAIALQPNDHEIWHNRGVAFGRLSEYVEAIASYEQAIAIQPQCYEAWFGK 598
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ A L E EAI +A+ +P S D RG + K + A+ + + +
Sbjct: 599 GETFAKLQEYEEAIAAYDRAIAIKPESYDAWRHRGTAFSELKQYEEAMICYDKAIAIKPD 658
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
N A+ G LS + + +A + +AI + +N
Sbjct: 659 NAQAWRDRGALLSELKQDSEAVASLSQAISIQQN 692
>gi|434387381|ref|YP_007097992.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428018371|gb|AFY94465.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 586
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 126/264 (47%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+K V+ L+ I + N+G Y ++ D+ + DP RG A+ + + A
Sbjct: 256 AKPKPVEDYLANAILEENKGNYRGMLTEADRAIAIDPNNARLYYIRGVAKFQLDDKKGAA 315
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D+T++I NP +A+ R ARA LG A++D ++A+ +P A R + FK
Sbjct: 316 DDYTKSIALNPRYPQAYSNRAYARAELGNPNGALEDTNRAIALDPKFALAYVNRSLAKFK 375
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
F DF +ED + + +D AY+ LA S +G+ + A E +A+ +D EA+
Sbjct: 376 FGDFKGVIEDTTRAIAIDPAIAIAYSNRSLAKSELGDQRGAIEDANRALAIDAKLGEAYI 435
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ L ++ A+ ++ + ++A+ G+ LG + AI + + ++
Sbjct: 436 NRGLANLRLGDNRAAIPDFERGAALKPTLAQAHSNIGVAKLQLGDTQGAIASSNRAISLN 495
Query: 616 PSNIECLYLRASCYHAIGEYREAV 639
P+ E ++R + +G+++ A+
Sbjct: 496 PNLPEGYFVRGFAKYQLGDHKGAI 519
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 9/240 (3%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+KSI+++ R +R A+ G A+ ++ + DP + A + R A+ +
Sbjct: 319 TKSIALNPRYPQAYSNRAYARAELGNPNGALEDTNRAIALDPKFALAYVNRSLAKFKFGD 378
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ I D T AI +P+ A+ R A++ LG+ AI+D ++AL + + RG
Sbjct: 379 FKGVIEDTTRAIAIDPAIAIAYSNRSLAKSELGDQRGAIEDANRALAIDAKLGEAYINRG 438
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ N + D AA+ D L A++ +G+A +G+ + A + +AI L+ N
Sbjct: 439 LANLRLGDNRAAIPDFERGAALKPTLAQAHSNIGVAKLQLGDTQGAIASSNRAISLNPNL 498
Query: 551 LEAWGHLTQF--YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E + + F YQ L + + A+E + + + F++AY R + LG +K+ + DL
Sbjct: 499 PEGY-FVRGFAKYQ-LGDHKGAIEDANRTISLRPTFAQAYANRAIARLQLGDNKQGLADL 556
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 62/151 (41%), Gaps = 7/151 (4%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AI D A+ + GEA+ RG A LG++ AI D + +P A G+
Sbjct: 415 GAIEDANRALAIDAKLGEAYINRGLANLRLGDNRAAIPDFERGAALKPTLAQAHSNIGVA 474
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ D A+ + + L+ Y G A +G++K A E + I L F +
Sbjct: 475 KLQLGDTQGAIASSNRAISLNPNLPEGYFVRGFAKYQLGDHKGAIEDANRTISLRPTFAQ 534
Query: 553 AWGH-------LTQFYQDLANSEKALECLQQ 576
A+ + L Q LA+ K+ E +Q
Sbjct: 535 AYANRAIARLQLGDNKQGLADLRKSAELFKQ 565
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
++++++D +L +RG+A + G +AI F++ P +A G A+ +
Sbjct: 421 NRALAIDAKLGEAYINRGLANLRLGDNRAAIPDFERGAALKPTLAQAHSNIGVAKLQLGD 480
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+ AI NP+ E + RG A+ LG+ AI+D ++ + P A R
Sbjct: 481 TQGAIASSNRAISLNPNLPEGYFVRGFAKYQLGDHKGAIEDANRTISLRPTFAQAYANRA 540
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKE 515
I + D + DL +L K+
Sbjct: 541 IARLQLGDNKQGLADLRKSAELFKQ 565
>gi|424836062|ref|ZP_18260719.1| TPR repeat-containing protein [Clostridium sporogenes PA 3679]
gi|365977464|gb|EHN13563.1| TPR repeat-containing protein [Clostridium sporogenes PA 3679]
Length = 251
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 34/202 (16%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+T AI+ NPS A+ R + L + +AI+D +K LE +P D + R IV + K
Sbjct: 45 YTIAIKLNPSFVNAYFNRAELYKELEKYNKAIEDYNKILELDPKDKDCYNNRAIVYYLIK 104
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+N A++DL V +DK K+ Y G+ I +YK+A KAI
Sbjct: 105 DYNKALKDLDKLVSMDKHYKNIYFNRGMIFLGIADYKRAAIEFTKAIH------------ 152
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+D +SE AY R + L ++ +IKD ++ + + P
Sbjct: 153 ----EDSKDSE------------------AYENRAFAYYNLKKYSPSIKDYTNAIKLTPE 190
Query: 618 NIECLYLRASCYHAIGEYREAV 639
N R + Y+ I Y +A+
Sbjct: 191 NKNIYLNRGTIYYKIKNYEKAI 212
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I Y A+ D+++ D Y RG + + A +FT+AI +
Sbjct: 95 NRAIVYYLIKDYNKALKDLDKLVSMDKHYKNIYFNRGMIFLGIADYKRAAIEFTKAIHED 154
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EA++ R A L + +I+D + A++ P + +I RG + +K K++ A+ D
Sbjct: 155 SKDSEAYENRAFAYYNLKKYSPSIKDYTNAIKLTPENKNIYLNRGTIYYKIKNYEKAISD 214
Query: 506 LSACVKLDKENKSAY 520
+ +++ S Y
Sbjct: 215 YMKALNSKEKDPSFY 229
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 65/150 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY AI +++IL+ DP + R ++ A+ D + + + + R
Sbjct: 71 KYNKAIEDYNKILELDPKDKDCYNNRAIVYYLIKDYNKALKDLDKLVSMDKHYKNIYFNR 130
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + + A + +KA+ + ++ R + K ++ +++D + +KL E
Sbjct: 131 GMIFLGIADYKRAAIEFTKAIHEDSKDSEAYENRAFAYYNLKKYSPSIKDYTNAIKLTPE 190
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
NK+ Y G I Y+KA ++KA+
Sbjct: 191 NKNIYLNRGTIYYKIKNYEKAISDYMKALN 220
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 510 VKLDKEN--KSAYTYLGLALSSIGEYKKAEEAHLK----AIQLDRNFLEAWGHLTQFYQD 563
K +KEN + Y Y S G Y + +K AI+L+ +F+ A+ + + Y++
Sbjct: 9 FKWEKENLQRKKYEYDAEKFFSNGYYSSNSKEKMKFYTIAIKLNPSFVNAYFNRAELYKE 68
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L KA+E ++L +D + Y+ R ++ + + + KA+KDL + +D +
Sbjct: 69 LEKYNKAIEDYNKILELDPKDKDCYNNRAIVYYLIKDYNKALKDLDKLVSMDKHYKNIYF 128
Query: 624 LRASCYHAIGEYREAVI 640
R + I +Y+ A I
Sbjct: 129 NRGMIFLGIADYKRAAI 145
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 41/104 (39%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ + Y A F + + ED EA R A ++ +I D+T AI+
Sbjct: 128 FNRGMIFLGIADYKRAAIEFTKAIHEDSKDSEAYENRAFAYYNLKKYSPSIKDYTNAIKL 187
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
P + RG + +AI D KAL + HE
Sbjct: 188 TPENKNIYLNRGTIYYKIKNYEKAISDYMKALNSKEKDPSFYHE 231
>gi|256422077|ref|YP_003122730.1| hypothetical protein Cpin_3056 [Chitinophaga pinensis DSM 2588]
gi|256036985|gb|ACU60529.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588]
Length = 543
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 362 AKRNKKFCVTRISKSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQIL 408
A R++ + +++K+ S DF + RG + + SAI+ +
Sbjct: 311 AFRDRGYLYAKLNKTDSAIADFTSAITLDPQSSLALGYRGALYIETKQLESAIADLSAAI 370
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
K DP + RG A E AI+DFT I P A++ RG + + A
Sbjct: 371 KIDPDALQHYYNRGLAYYQWGAYEPAIADFTTLITKGPPNAVAYRYRGNLYTYVNKPALA 430
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I D+SKA++ P A+ RG+ D+ AV+D S +KLD +K+ Y LA
Sbjct: 431 IADISKAIDLAPKEAESYAVRGLAYALQADYKQAVQDFSTSIKLDPGSKTIYVNRALAYK 490
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+ YK A + + +AI+LD N ++ + + Y+ + + A
Sbjct: 491 YLNNYKAAIKDYTQAIELDPNDVDVYKERGKVYEQMGKKDLA 532
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 2/236 (0%)
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEA-AISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+Q ++E P + E +GT + E A I D+T+ I P A++ RG A L
Sbjct: 265 EQYIEEQP-FTEFYATQGTTYSTLEEKYALTIRDYTKVITLFPGNSAAFRDRGYLYAKLN 323
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
++ AI D + A+ +P S+ L RG + + K +A+ DLSA +K+D + Y
Sbjct: 324 KTDSAIADFTSAITLDPQSSLALGYRGALYIETKQLESAIADLSAAIKIDPDALQHYYNR 383
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
GLA G Y+ A I A+ + Y + A+ + + + + +
Sbjct: 384 GLAYYQWGAYEPAIADFTTLITKGPPNAVAYRYRGNLYTYVNKPALAIADISKAIDLAPK 443
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+++Y +RGL +K+A++D S+ + +DP + RA Y + Y+ A+
Sbjct: 444 EAESYAVRGLAYALQADYKQAVQDFSTSIKLDPGSKTIYVNRALAYKYLNNYKAAI 499
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
E KYA I + +++ P A RG A + ++AI+DFT AI +P + A
Sbjct: 288 EEKYALTIRDYTKVITLFPGNSAAFRDRGYLYAKLNKTDSAIADFTSAITLDPQSSLALG 347
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + AI DLS A++ +P++ + RG+ +++ + A+ D + +
Sbjct: 348 YRGALYIETKQLESAIADLSAAIKIDPDALQHYYNRGLAYYQWGAYEPAIADFTTLITKG 407
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
N AY Y G + + + A KAI L E++ Y A+ ++A++
Sbjct: 408 PPNAVAYRYRGNLYTYVNKPALAIADISKAIDLAPKEAESYAVRGLAYALQADYKQAVQD 467
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ +D Y R L L +K AIKD + + +DP++++ R Y +G
Sbjct: 468 FSTSIKLDPGSKTIYVNRALAYKYLNNYKAAIKDYTQAIELDPNDVDVYKERGKVYEQMG 527
Query: 634 E 634
+
Sbjct: 528 K 528
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
NRA Y L +K I+D +A++LDP + Y +G + +G+K+ A + ++K
Sbjct: 483 VNRALAYKYLNNYKAAIKDYTQAIELDPNDVDVYKERGKVYEQMGKKDLAAADFKKA 539
>gi|300023725|ref|YP_003756336.1| hypothetical protein Hden_2217 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525546|gb|ADJ24015.1| TPR repeat-containing protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 558
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 104/243 (42%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R +A G+ A+ ++ ++ P YP A RG +L+ A+ DF A+ P
Sbjct: 73 RAVANARLGQIKLALEDYNHAVELFPEYPVAYNNRGNLLVAVGQLDEAMKDFDRALVLAP 132
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ R A LG+ AI+D +KA+E P SA L RG+ +AA+ D
Sbjct: 133 GYAAAYSNRANAEMKLGKPAVAIRDFTKAIELLPASAPPLSGRGLAYLATDKPHAAIRDF 192
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S V D +AY A +IG A E +AI D N E + Y AN
Sbjct: 193 SRAVSADARFATAYRNRAEARMTIGLRDDAIEDLSRAIAFDVNNTELYVVRGYAYLLNAN 252
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ AL+ + + +D S A+ RGL +A DL+ + +DP + RA
Sbjct: 253 TASALKDFSRAIELDPNASAAFEGRGLANSFAEASDEAYADLNRAIELDPRSPVAYAFRA 312
Query: 627 SCY 629
Y
Sbjct: 313 VVY 315
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 34/254 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A++ GK A AI F + ++ P L GRG A + AAI DF+ A+ ++
Sbjct: 140 NRANAEMKLGKPAVAIRDFTKAIELLPASAPPLSGRGLAYLATDKPHAAIRDFSRAVSAD 199
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A++ R +AR +G +AI+DLS+A+ F+ N+ ++ RG + +A++D
Sbjct: 200 ARFATAYRNRAEARMTIGLRDDAIEDLSRAIAFDVNNTELYVVRGYAYLLNANTASALKD 259
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S ++LD +A+ GLA S F EA
Sbjct: 260 FSRAIELDPNASAAFEGRGLANS---------------------FAEA------------ 286
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
S++A L + + +D R AY R ++ Q KD+ + + +DP++ E L+ R
Sbjct: 287 -SDEAYADLNRAIELDPRSPVAYAFRAVVYKQNNQPDIGAKDVETAIKLDPNSPEALWAR 345
Query: 626 ASCYHAIGEYREAV 639
A G A+
Sbjct: 346 GEIAEASGHADTAI 359
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 87/230 (37%), Gaps = 54/230 (23%)
Query: 444 SNPSA---GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
PSA G A RG A+ EA++D A + A IL++R + N +
Sbjct: 28 PQPSAAEQGAAQMVRGDVATAVTAYTEALRDTGLAND---RRATILNDRAVANARLGQIK 84
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ED + V+L E AY G L ++G+ +A + DR + A G+
Sbjct: 85 LALEDYNHAVELFPEYPVAYNNRGNLLVAVGQLDEAMK------DFDRALVLAPGYAAA- 137
Query: 561 YQDLANSE--------------KALECLQ---------------------------QVLY 579
Y + AN+E KA+E L + +
Sbjct: 138 YSNRANAEMKLGKPAVAIRDFTKAIELLPASAPPLSGRGLAYLATDKPHAAIRDFSRAVS 197
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
D RF+ AY R +G AI+DLS + D +N E +R Y
Sbjct: 198 ADARFATAYRNRAEARMTIGLRDDAIEDLSRAIAFDVNNTELYVVRGYAY 247
>gi|153008723|ref|YP_001369938.1| hypothetical protein Oant_1392 [Ochrobactrum anthropi ATCC 49188]
gi|151560611|gb|ABS14109.1| TPR repeat-containing protein [Ochrobactrum anthropi ATCC 49188]
Length = 301
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D+++AIQ N
Sbjct: 92 RGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYRYMGDSTKAVQDYSKAIQLNS 151
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG G +A+ D ++A+ + H RG++ A+ED
Sbjct: 152 QYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDF 211
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+ +
Sbjct: 212 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVYEHNGD 271
Query: 567 SEKALECLQQVLYIDKRFSKA 587
KA + + +D ++ A
Sbjct: 272 KAKAANSYSRAVQLDPKYQPA 292
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V
Sbjct: 72 ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALV-- 129
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
Y Y+G + ++ +Y KA IQL+ + A+
Sbjct: 130 -------------------------YRYMGDSTKAVQDYSKA-------IQLNSQYDAAY 157
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
Y+ ++AL Q + + +AYH RGL+ GQHK+AI+D S + +
Sbjct: 158 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAISL 217
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
+ + E R Y A+G+Y A
Sbjct: 218 NSTAPEPYNGRGISYVALGDYDNAF 242
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
IS +++ +P PE RG+A + A+ DF +AI NP+ +A+ R
Sbjct: 72 ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYR 131
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+G+S +A+QD SKA++ RG V + + A+ D + + L + AY
Sbjct: 132 YMGDSTKAVQDYSKAIQLNSQYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAY 191
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL + G++K+A E KAI L+ E + Y L + + A + + +
Sbjct: 192 HNRGLIYQAKGQHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 251
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
D+ ++++ + L+ G KA S + +DP
Sbjct: 252 DQNIAESWANQALVYEHNGDKAKAANSYSRAVQLDP 287
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG G+ A+S F+Q + A RG + + + AI DF++AI
Sbjct: 158 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAISL 217
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N +A E + RG + ALG+ A D + A+ + N A+ + +V D A
Sbjct: 218 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVYEHNGDKAKAAN 277
Query: 505 DLSACVKLDKENKSA 519
S V+LD + + A
Sbjct: 278 SYSRAVQLDPKYQPA 292
>gi|75909713|ref|YP_324009.1| protein prenyltransferase subunit alpha [Anabaena variabilis ATCC
29413]
gi|75703438|gb|ABA23114.1| Protein prenyltransferase, alpha subunit [Anabaena variabilis ATCC
29413]
Length = 1007
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 3/212 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+A N G++ AI+ +++ ++ +PEA RG + + A++ F A+Q N
Sbjct: 194 SRGVALCNLGRFEQAIASYNRAIEFKHNFPEAWTNRGVILNSLKLYQEALTSFETALQIN 253
Query: 446 PSAGE---AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
P+ E AW RG L + EAI KA+EF+ + + RG+ F A
Sbjct: 254 PNFPEVFNAWYGRGNTLFNLEKFEEAIASYDKAIEFKADDYSAWYNRGVALDNLGQFEEA 313
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ ++ ++ SA+ Y G+AL+++G +++A ++ KAI+ + AW +
Sbjct: 314 IASYDKAIEFKADDYSAWNYRGVALANLGRFEEAIASYDKAIEFKADDYSAWYNRGVALS 373
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+L ++A+ + + F A+ RG++
Sbjct: 374 NLGRFQEAITSYDKAIEFKADFYIAWMNRGIV 405
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 3/224 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L++G+A N G+ AI+ FD+ ++ P A RG A E AI+ + AI+
Sbjct: 159 LNQGVALANLGQLEQAITSFDKAIEFKPDDDSAWYSRGVALCNLGRFEQAIASYNRAIEF 218
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL---HERGIVNFKFKDFNA 501
+ EAW RG +L EA+ AL+ PN ++ + RG F + F
Sbjct: 219 KHNFPEAWTNRGVILNSLKLYQEALTSFETALQINPNFPEVFNAWYGRGNTLFNLEKFEE 278
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ ++ ++ SA+ G+AL ++G++++A ++ KAI+ + AW +
Sbjct: 279 AIASYDKAIEFKADDYSAWYNRGVALDNLGQFEEAIASYDKAIEFKADDYSAWNYRGVAL 338
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+L E+A+ + + A++ RG+ L LG+ ++AI
Sbjct: 339 ANLGRFEEAIASYDKAIEFKADDYSAWYNRGVALSNLGRFQEAI 382
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 17/234 (7%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA + +G A A +LE AI+ F +AI+ P AW RG A LG +AI ++A
Sbjct: 156 EAWLNQGVALANLGQLEQAITSFDKAIEFKPDDDSAWYSRGVALCNLGRFEQAIASYNRA 215
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD---KENKSAYTYLGLALSSIGE 532
+EF+ N + RG++ K + A+ ++++ E +A+ G L ++ +
Sbjct: 216 IEFKHNFPEAWTNRGVILNSLKLYQEALTSFETALQINPNFPEVFNAWYGRGNTLFNLEK 275
Query: 533 YKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
+++A ++ KAI+ + AW +L QF + +A+ +KA+E + +S
Sbjct: 276 FEEAIASYDKAIEFKADDYSAWYNRGVALDNLGQFEEAIASYDKAIE------FKADDYS 329
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
A++ RG+ L LG+ ++AI + + Y R +G ++EA+
Sbjct: 330 -AWNYRGVALANLGRFEEAIASYDKAIEFKADDYSAWYNRGVALSNLGRFQEAI 382
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 3/213 (1%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E E + F +AI+ EAW +G A A LG+ +AI KA+EF+P+ + R
Sbjct: 136 EEEETSNQFNDAIELTSDEAEAWLNQGVALANLGQLEQAITSFDKAIEFKPDDDSAWYSR 195
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ F A+ + ++ A+T G+ L+S+ Y++A + A+Q++ N
Sbjct: 196 GVALCNLGRFEQAIASYNRAIEFKHNFPEAWTNRGVILNSLKLYQEALTSFETALQINPN 255
Query: 550 FLE---AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
F E AW +L E+A+ + + A++ RG+ L LGQ ++AI
Sbjct: 256 FPEVFNAWYGRGNTLFNLEKFEEAIASYDKAIEFKADDYSAWYNRGVALDNLGQFEEAIA 315
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + R +G + EA+
Sbjct: 316 SYDKAIEFKADDYSAWNYRGVALANLGRFEEAI 348
>gi|428209463|ref|YP_007093816.1| hypothetical protein Chro_4556 [Chroococcidiopsis thermalis PCC 7203]
gi|428011384|gb|AFY89947.1| Tetratricopeptide TPR_1 repeat-containing protein [Chroococcidiopsis
thermalis PCC 7203]
Length = 1066
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA +Y AI+ +D++L+ P PE RG A + E A + F + ++ P+
Sbjct: 811 GIAHWELQQYEKAIAAYDKVLEVRPNNPETWYQRGLALKELKRYEGAFAAFNKVLKVEPN 870
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+AW +RG + EAI KA+E P +RG+ K + A +
Sbjct: 871 DEKAWFQRGIVLGRASKLAEAIAAYDKAVEINPQYYQAWIDRGVALGKLQRHEEAFQSFD 930
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
V++ ++ A+ G+AL + Y+ A ++ KAI+ + + +AW L
Sbjct: 931 KAVQIKPDSAVAWLNRGMALEVLERYEDAIASYDKAIEFNPDSFKAWNSRGYLLVQLERD 990
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+AL + L I +S AY+ + GQ + A+++L + ++PS+ E
Sbjct: 991 AEALTSFDRALQIKSDYSNAYYNKAACYALQGQAESALENLQQAIKLNPSHRE 1043
>gi|428221055|ref|YP_007105225.1| hypothetical protein Syn7502_00975 [Synechococcus sp. PCC 7502]
gi|427994395|gb|AFY73090.1| tetratricopeptide repeat protein [Synechococcus sp. PCC 7502]
Length = 286
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 3/252 (1%)
Query: 374 SKSKSISVD---FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+KSKS ++ + +G + + Y AI+ +D ++ YP+A RGTA
Sbjct: 4 TKSKSPEIENHHYWYDQGTVLLKQNLYVEAIASYDMAIEIHSEYPQAWYSRGTALRKSER 63
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AI+ + AI+ PS +AW RG A L + A+ KA+ F+ + + RG
Sbjct: 64 YEEAIASYDTAIKLKPSYYQAWNLRGVALFMLSQYQNALDSFDKAIGFKYDYYQAWNNRG 123
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
D+ A+ ++ A+ G L + ++ KA + +A++ N
Sbjct: 124 STLVGLGDYKEAILSYDEAIRFHPNFYQAWNNRGNLLRKLQQFSKALTCYEEALKYQSNL 183
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
E W + L ++A+ Q + + + A++ RG + L ++++AI
Sbjct: 184 YETWNNKGTVLASLERYDQAIAAYGQAIRVKPDYYLAWYNRGQVFVTLERYQEAIASYDQ 243
Query: 611 GLGIDPSNIECL 622
L + P + E L
Sbjct: 244 ALKLQPESYEAL 255
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+GT Q AI+ + AI+ + +AW RG A EAI A++ +P
Sbjct: 20 QGTVLLKQNLYVEAIASYDMAIEIHSEYPQAWYSRGTALRKSERYEEAIASYDTAIKLKP 79
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ + RG+ F + A++ + + A+ G L +G+YK+A ++
Sbjct: 80 SYYQAWNLRGVALFMLSQYQNALDSFDKAIGFKYDYYQAWNNRGSTLVGLGDYKEAILSY 139
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI+ NF +AW + + L KAL C ++ L + ++ +G +L L +
Sbjct: 140 DEAIRFHPNFYQAWNNRGNLLRKLQQFSKALTCYEEALKYQSNLYETWNNKGTVLASLER 199
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +AI + + P Y R + + Y+EA+
Sbjct: 200 YDQAIAAYGQAIRVKPDYYLAWYNRGQVFVTLERYQEAI 238
>gi|440684051|ref|YP_007158846.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428681170|gb|AFZ59936.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 1176
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 108/253 (42%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+ Q G A++ ++Q K P E +G + L AI+ + +A+ P
Sbjct: 308 QGLQQAKSGDLLGALAFYNQATKMQPEDHEYWFNQGLTLFHLQRLTEAIAAYDQALSLKP 367
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+AW RG G+ AI +A++F+P+ + RG+ K A+
Sbjct: 368 DFHKAWYNRGGILGEFGDFDNAIASFDQAIQFKPDYQEAWSSRGLALLKLGLIWEAISSY 427
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+KL ++ + Y G+AL+ +Y+ A ++ +AI + ++ E W L
Sbjct: 428 DQALKLQPHDQETWYYRGVALAVGEQYEDAIASYDRAIDIQPDYHEVWIDRGVVLFSLKR 487
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+E Q L I A + RG+ L LG+ ++AI + I P Y +A
Sbjct: 488 WSEAIESWDQALSIQPDVYLACYNRGIALENLGRREEAITSYQQAITIKPDFHPAWYNQA 547
Query: 627 SCYHAIGEYREAV 639
+ + EA+
Sbjct: 548 VALFYLDRFPEAI 560
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 6/197 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + +AI+ FDQ ++ P Y EA RG A + AIS + +A++ P E W
Sbjct: 384 GDFDNAIASFDQAIQFKPDYQEAWSSRGLALLKLGLIWEAISSYDQALKLQPHDQETWYY 443
Query: 455 RGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A A+GE E AI +A++ +P+ ++ +RG+V F K ++ A+E + +
Sbjct: 444 RGVA-LAVGEQYEDAIASYDRAIDIQPDYHEVWIDRGVVLFSLKRWSEAIESWDQALSIQ 502
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKAL 571
+ A G+AL ++G ++A ++ +AI + +F AW + + FY D +A+
Sbjct: 503 PDVYLACYNRGIALENLGRREEAITSYQQAITIKPDFHPAWYNQAVALFYLD--RFPEAI 560
Query: 572 ECLQQVLYIDKRFSKAY 588
C L I + +A+
Sbjct: 561 ACYDSALEIKLDYWEAW 577
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
++ ++G+ + + AI+ +DQ L P + +A RG + + AI+ F +A
Sbjct: 337 EYWFNQGLTLFHLQRLTEAIAAYDQALSLKPDFHKAWYNRGGILGEFGDFDNAIASFDQA 396
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
IQ P EAW RG A LG EAI +AL+ +P+ + + RG+ + +
Sbjct: 397 IQFKPDYQEAWSSRGLALLKLGLIWEAISSYDQALKLQPHDQETWYYRGVALAVGEQYED 456
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ + + + + G+ L S+ + +A E+ +A+ + + A +
Sbjct: 457 AIASYDRAIDIQPDYHEVWIDRGVVLFSLKRWSEAIESWDQALSIQPDVYLACYNRGIAL 516
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
++L E+A+ QQ + I F A++ + + L L + +AI S L I E
Sbjct: 517 ENLGRREEAITSYQQAITIKPDFHPAWYNQAVALFYLDRFPEAIACYDSALEIKLDYWEA 576
Query: 622 LYLRASC 628
RA
Sbjct: 577 WLGRAGA 583
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 10/229 (4%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+A +G +A +L A++ + +A + P E W +G L EAI +A
Sbjct: 303 QAWFYQGLQQAKSGDLLGALAFYNQATKMQPEDHEYWFNQGLTLFHLQRLTEAIAAYDQA 362
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L +P+ + RG + +F DF+ A+ ++ + + A++ GLAL +G +
Sbjct: 363 LSLKPDFHKAWYNRGGILGEFGDFDNAIASFDQAIQFKPDYQEAWSSRGLALLKLGLIWE 422
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLA-----NSEKALECLQQVLYIDKRFSKAYHL 590
A ++ +A++L + E W +Y+ +A E A+ + + I + + +
Sbjct: 423 AISSYDQALKLQPHDQETW-----YYRGVALAVGEQYEDAIASYDRAIDIQPDYHEVWID 477
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG++L L + +AI+ L I P Y R +G EA+
Sbjct: 478 RGVVLFSLKRWSEAIESWDQALSIQPDVYLACYNRGIALENLGRREEAI 526
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 2/160 (1%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A +G+ K D A+ + K+ E+ + GL L + +A A+
Sbjct: 300 NQAQAWFYQGLQQAKSGDLLGALAFYNQATKMQPEDHEYWFNQGLTLFHLQRLTEAIAAY 359
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+A+ L +F +AW + + + + A+ Q + + +A+ RGL L LG
Sbjct: 360 DQALSLKPDFHKAWYNRGGILGEFGDFDNAIASFDQAIQFKPDYQEAWSSRGLALLKLGL 419
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE-YREAV 639
+AI L + P + E Y R A+GE Y +A+
Sbjct: 420 IWEAISSYDQALKLQPHDQETWYYRGVAL-AVGEQYEDAI 458
>gi|327399475|ref|YP_004340344.1| hypothetical protein Hipma_1328 [Hippea maritima DSM 10411]
gi|327182104|gb|AEA34285.1| Tetratricopeptide TPR_1 repeat-containing protein [Hippea maritima
DSM 10411]
Length = 260
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 1/204 (0%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+ L +G Q E E AI F A++ NPS +A+ G A L +A +KA
Sbjct: 6 DVLFHKGELLVEQGECEKAIVYFLNAVKENPSFEDAYIEIGYCYAQLDNFDDAEDYCNKA 65
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLS-ACVKLDKENKSAYTYLGLALSSIGEYK 534
+E PN+ + + ++ KF F +E L+ ++LD+ + S Y +G A +GE
Sbjct: 66 IEINPNNLEAYNTLAMIYHKFGFFEDEIEALNEIIIRLDEPDASIYLNIGNAYYELGEND 125
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A E + AI ++ +F EA+ ++ Y KA E +Q L ID S Y G++
Sbjct: 126 RAIEFYDMAIGMEPDFAEAYANMGNAYMAKDEYIKATEAYKQALQIDPNMSDVYLNLGIV 185
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSN 618
LG + +A+K + I+P N
Sbjct: 186 YGELGSYDEAVKYFEQSIRINPYN 209
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 111/229 (48%), Gaps = 5/229 (2%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +G V +G+ AI F +KE+P + +A I G A + A +A
Sbjct: 6 DVLFHKGELLVEQGECEKAIVYFLNAVKENPSFEDAYIEIGYCYAQLDNFDDAEDYCNKA 65
Query: 442 IQSNPSAGEAWKRRGQARAALG---ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
I+ NP+ EA+ G + +EA+ ++ L+ EP+ A I G ++ +
Sbjct: 66 IEINPNNLEAYNTLAMIYHKFGFFEDEIEALNEIIIRLD-EPD-ASIYLNIGNAYYELGE 123
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+E + ++ + AY +G A + EY KA EA+ +A+Q+D N + + +L
Sbjct: 124 NDRAIEFYDMAIGMEPDFAEAYANMGNAYMAKDEYIKATEAYKQALQIDPNMSDVYLNLG 183
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
Y +L + ++A++ +Q + I+ A++ G++ L + +KA+ +
Sbjct: 184 IVYGELGSYDEAVKYFEQSIRINPYNPSAHYNLGIIWVMLNEKEKALNE 232
>gi|428312302|ref|YP_007123279.1| hypothetical protein Mic7113_4172 [Microcoleus sp. PCC 7113]
gi|428253914|gb|AFZ19873.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 270
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 7/198 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++N G Y AI+ FDQ L+ D + RG A E AI+D+TEAI+ N
Sbjct: 50 NRGVDKLNAGNYQGAIADFDQALQLDSKDADTYYNRGYAYHTIGSYEKAITDYTEAIRLN 109
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG L ++I D +KA+E +S + RG + + + +AA+ D
Sbjct: 110 PKFAQAYSNRGYTYFVLKNYQQSIADATKAIELNQSSDNAYVSRGNAHDELGNHDAALAD 169
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQF--- 560
+ L+ + A+ GL + + +++ A + + +AI++ F EA+ + L++F
Sbjct: 170 YEKALSLNPNSARAFYNRGLTRNRLNQHQSAIQDYSQAIRIQPEFAEAYYNRGLSRFTLK 229
Query: 561 -YQD-LANSEKALECLQQ 576
YQD +A+ +KA E +Q
Sbjct: 230 NYQDAIADLKKAAELFKQ 247
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A G Y AI+ + + ++ +P + +A RG + + +I+D T+A
Sbjct: 80 DTYYNRGYAYHTIGSYEKAITDYTEAIRLNPKFAQAYSNRGYTYFVLKNYQQSIADATKA 139
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ N S+ A+ RG A LG A+ D KAL PNSA + RG+ + +
Sbjct: 140 IELNQSSDNAYVSRGNAHDELGNHDAALADYEKALSLNPNSARAFYNRGLTRNRLNQHQS 199
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
A++D S +++ E AY GL+ ++ Y+ A
Sbjct: 200 AIQDYSQAIRIQPEFAEAYYNRGLSRFTLKNYQDA 234
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG + + AI+DF +A+Q + + + RG A +G +AI D ++A+
Sbjct: 48 LYNRGVDKLNAGNYQGAIADFDQALQLDSKDADTYYNRGYAYHTIGSYEKAITDYTEAIR 107
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P A RG F K++ ++ D + ++L++ + +AY G A +G + A
Sbjct: 108 LNPKFAQAYSNRGYTYFVLKNYQQSIADATKAIELNQSSDNAYVSRGNAHDELGNHDAAL 167
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ KA+ L+ N A+ + L + A++ Q + I F++AY+ RGL
Sbjct: 168 ADYEKALSLNPNSARAFYNRGLTRNRLNQHQSAIQDYSQAIRIQPEFAEAYYNRGLSRFT 227
Query: 598 LGQHKKAIKDL 608
L ++ AI DL
Sbjct: 228 LKNYQDAIADL 238
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++++AIR L+ AQ+Y NR + Y L+ ++ I D KA++L+ + AY+
Sbjct: 98 AITDYTEAIR-LNPKFAQAY-----SNRGYTYFVLKNYQQSIADATKAIELNQSSDNAYV 151
Query: 108 LKGCAFSALGRKEEALSVWEK 128
+G A LG + AL+ +EK
Sbjct: 152 SRGNAHDELGNHDAALADYEK 172
>gi|327401541|ref|YP_004342380.1| hypothetical protein Arcve_1665 [Archaeoglobus veneficus SNP6]
gi|327317049|gb|AEA47665.1| Tetratricopeptide TPR_1 repeat-containing protein [Archaeoglobus
veneficus SNP6]
Length = 222
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 2/191 (1%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
+ F + L+ +P L G A ++ AIS A++ NP +AW RG +
Sbjct: 22 VEFFSKCLEMEPENIYVLNNLGIALYELGRIDEAISYIDRALELNPDYADAWYNRGIVLS 81
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
G+ EAI KA+ P+ A + G+ ++ + A+E CV +D+E+ +A+
Sbjct: 82 DAGKYDEAIACFEKAIALNPDDAAAWNNMGLAYYESGNMGKAIECYRKCVSIDEEHAAAW 141
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
+GLA G + KAEE+ KA++LD + ++ +L Y L E A+EC ++L I
Sbjct: 142 YNMGLAYYESGRFNKAEESFKKALELDES-VDTLNNLGIVYGKLRQYEMAMECFNRILEI 200
Query: 581 DKRFSKA-YHL 590
D S A Y+L
Sbjct: 201 DPENSAATYNL 211
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 1/190 (0%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
R E + F++ ++ P G A LG EAI + +ALE P+ AD +
Sbjct: 16 RNPEEEVEFFSKCLEMEPENIYVLNNLGIALYELGRIDEAISYIDRALELNPDYADAWYN 75
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RGIV ++ A+ + L+ ++ +A+ +GLA G KA E + K + +D
Sbjct: 76 RGIVLSDAGKYDEAIACFEKAIALNPDDAAAWNNMGLAYYESGNMGKAIECYRKCVSIDE 135
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
AW ++ Y + KA E ++ L +D+ +L G++ L Q++ A++
Sbjct: 136 EHAAAWYNMGLAYYESGRFNKAEESFKKALELDESVDTLNNL-GIVYGKLRQYEMAMECF 194
Query: 609 SSGLGIDPSN 618
+ L IDP N
Sbjct: 195 NRILEIDPEN 204
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 5/166 (3%)
Query: 370 VTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
++ I ++ ++ D+ +RGI + GKY AI+ F++ + +P A G A
Sbjct: 56 ISYIDRALELNPDYADAWYNRGIVLSDAGKYDEAIACFEKAIALNPDDAAAWNNMGLAYY 115
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ AI + + + + AW G A G +A + KALE + S D L
Sbjct: 116 ESGNMGKAIECYRKCVSIDEEHAAAWYNMGLAYYESGRFNKAEESFKKALELD-ESVDTL 174
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+ GIV K + + A+E + +++D EN SA TY L L + E
Sbjct: 175 NNLGIVYGKLRQYEMAMECFNRILEIDPEN-SAATYNLLILKRLME 219
>gi|170740913|ref|YP_001769568.1| hypothetical protein M446_2695 [Methylobacterium sp. 4-46]
gi|168195187|gb|ACA17134.1| TPR repeat-containing protein [Methylobacterium sp. 4-46]
Length = 292
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G Y AI+ F + ++ DP A R A +AA+ DFT A+ ++
Sbjct: 75 TRGAAYARAGNYGEAIADFTKAVQLDPNSASAYSNRALAYRQSGRNDAALQDFTRALTAD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R + A+G A DLS+A+ P SA+ H RG+V AA+ D
Sbjct: 135 PNYSAAYIGRANLQRAMGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQGQHRAAIGD 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A + + + Y G +L + +Y KA E A+ ++ ++W + Y+
Sbjct: 195 FDAAIDRNPFVSAPYAARGQSLIATNQYDKAIEDFNAALNVNNKDADSWAYRGVAYEKSG 254
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
++A+E Q+ ID+ + A G + G+
Sbjct: 255 RRQEAMESYQRATAIDQNNAVARQGLGRVQGGM 287
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 11/252 (4%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
V+R + ++ +V G A VN I+ +++ +P P A RG A A
Sbjct: 31 TVSRATATRQFAVLETDKTGAADVN-------IASLTDVIQRNPSDPAAYNTRGAAYARA 83
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
AI+DFT+A+Q +P++ A+ R A G + A+QD ++AL +PN +
Sbjct: 84 GNYGEAIADFTKAVQLDPNSASAYSNRALAYRQSGRNDAALQDFTRALTADPNYSAAYIG 143
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R + ++ AA DLS ++L E+ AY GL + G+++ A AI DR
Sbjct: 144 RANLQRAMGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQGQHRAAIGDFDAAI--DR 201
Query: 549 NFLEAWGHLTQFYQDLANSE--KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
N + + + +A ++ KA+E L ++ + + ++ RG+ G+ ++A++
Sbjct: 202 NPFVSAPYAARGQSLIATNQYDKAIEDFNAALNVNNKDADSWAYRGVAYEKSGRRQEAME 261
Query: 607 DLSSGLGIDPSN 618
ID +N
Sbjct: 262 SYQRATAIDQNN 273
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 75/171 (43%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I L+ ++ P+ + RG + ++ A+ D + V+LD + SAY+ LA
Sbjct: 56 IASLTDVIQRNPSDPAAYNTRGAAYARAGNYGEAIADFTKAVQLDPNSASAYSNRALAYR 115
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
G A + +A+ D N+ A+ + + N E A L Q + + ++AY
Sbjct: 116 QSGRNDAALQDFTRALTADPNYSAAYIGRANLQRAMGNYEAAYSDLSQAIRLTPESAEAY 175
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
H RGL+ GQH+ AI D + + +P R A +Y +A+
Sbjct: 176 HARGLVRQAQGQHRAAIGDFDAAIDRNPFVSAPYAARGQSLIATNQYDKAI 226
>gi|428312764|ref|YP_007123741.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Microcoleus sp. PCC 7113]
gi|428254376|gb|AFZ20335.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Microcoleus sp. PCC 7113]
Length = 789
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 2/241 (0%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+RL G A ++G+ A AI+ + +K P Y EA G A Q L AAI + +AI
Sbjct: 76 YRL--GSALQSKGQLAEAIAFYQHAIKLQPDYTEAHYNLGYAFHQQGNLPAAIEHYQQAI 133
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
NP+ EA G+ AI +A+ +P+ +I + G + + +AA
Sbjct: 134 ALNPNQAEAHANLAHILQHQGQIEAAITHYQQAIAIKPDVPEIFYNLGNLLKQQNQLDAA 193
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ + L+ A+ LG +L S+G+Y++A + +A+ L+ N L+ + L
Sbjct: 194 MIQYQWALALNPNYIDAHLQLGTSLHSLGKYEEAIICYQQALTLEPNVLDTYLKLGWALM 253
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
L+ EKA C QQ L ++ + Y L L Q ++AI L ++ + +E
Sbjct: 254 HLSRFEKATHCFQQALILNPEHPEVYQKLALALASQNQLEEAITSFQKALHLNSNFVEAY 313
Query: 623 Y 623
+
Sbjct: 314 W 314
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 5/233 (2%)
Query: 395 GKYASAISIFDQILKEDPMYPEAL--IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
G + A I QIL++ P EAL +GR + +LE AI+ + + I P EA+
Sbjct: 18 GNLSHAEWICQQILQQQPNSTEALDLLGRMAHQV--GKLEEAIAYYQKLIALLPDYAEAY 75
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
R G A + G+ EAI A++ +P+ + + G + + AA+E + L
Sbjct: 76 YRLGSALQSKGQLAEAIAFYQHAIKLQPDYTEAHYNLGYAFHQQGNLPAAIEHYQQAIAL 135
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
+ A+ L L G+ + A + +AI + + E + +L + + A+
Sbjct: 136 NPNQAEAHANLAHILQHQGQIEAAITHYQQAIAIKPDVPEIFYNLGNLLKQQNQLDAAMI 195
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
Q L ++ + A+ G LH LG++++AI L ++P N+ YL+
Sbjct: 196 QYQWALALNPNYIDAHLQLGTSLHSLGKYEEAIICYQQALTLEP-NVLDTYLK 247
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 98/244 (40%), Gaps = 16/244 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L R QV GK AI+ + +++ P Y EA G+A + +L AI+ + AI+
Sbjct: 44 LGRMAHQV--GKLEEAIAYYQKLIALLPDYAEAYYRLGSALQSKGQLAEAIAFYQHAIKL 101
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD-------ILHERGIVNFKFK 497
P EA G A G AI+ +A+ PN A+ IL +G
Sbjct: 102 QPDYTEAHYNLGYAFHQQGNLPAAIEHYQQAIALNPNQAEAHANLAHILQHQG------- 154
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
AA+ + + + + LG L + A + A+ L+ N+++A L
Sbjct: 155 QIEAAITHYQQAIAIKPDVPEIFYNLGNLLKQQNQLDAAMIQYQWALALNPNYIDAHLQL 214
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
L E+A+ C QQ L ++ Y G L L + +KA L ++P
Sbjct: 215 GTSLHSLGKYEEAIICYQQALTLEPNVLDTYLKLGWALMHLSRFEKATHCFQQALILNPE 274
Query: 618 NIEC 621
+ E
Sbjct: 275 HPEV 278
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 44/104 (42%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
+D L G + + GKY AI + Q L +P + + G A E A F +
Sbjct: 208 IDAHLQLGTSLHSLGKYEEAIICYQQALTLEPNVLDTYLKLGWALMHLSRFEKATHCFQQ 267
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
A+ NP E +++ A A+ + EAI KAL N +
Sbjct: 268 ALILNPEHPEVYQKLALALASQNQLEEAITSFQKALHLNSNFVE 311
>gi|425466451|ref|ZP_18845749.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9809]
gi|389831011|emb|CCI26579.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9809]
Length = 707
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 122/246 (49%), Gaps = 3/246 (1%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNP-SAGEAWK 453
+Y A++ +DQ LK +P Y EA G+ A A QR EA I + +AIQ NP SA AW
Sbjct: 347 RYTDALNYYDQALKINPDYLEAFQGKADALLALQRYSEALII-YEKAIQINPDSAWPAWL 405
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RGQA LG++ EA++ + L P ++ + + + + ++AA + L +
Sbjct: 406 GRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQ 465
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ + + G +L ++ +Y+ A +A+ +A+ L+ + W L ALE
Sbjct: 466 QNDAKTWYKKGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALES 525
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + +FS+A++ +G++L L + +A++ + + + + + + H +
Sbjct: 526 YSKAGQFNPQFSQAHYSQGIILQKLDRKSEALEAFTQATKANSNYYQAWLNQGALLHQME 585
Query: 634 EYREAV 639
++EA+
Sbjct: 586 RFQEAI 591
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 117/248 (47%), Gaps = 7/248 (2%)
Query: 396 KYASAISIFDQILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+Y+ A+ I+++ ++ +P +P A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALIIYEKAIQINPDSAWP-AWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQ 439
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+ L + A + L K L F+ N A +++G +D+ AV+ + L+
Sbjct: 440 GKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALALE 499
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKAL 571
+N + G +L + + A E++ KA Q + F +A H +Q Q L +AL
Sbjct: 500 SDNALIWYQKGNSLYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLDRKSEAL 557
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
E Q + + +A+ +G LLH + + ++AI I E + ++
Sbjct: 558 EAFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYR 617
Query: 632 IGEYREAV 639
+G+Y +A+
Sbjct: 618 LGDYSQAI 625
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 106/262 (40%), Gaps = 34/262 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ F+++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 465 QQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L + +A EA +A + + N+ +AW +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLDRKSEALEAFTQATKANSNYYQAWLNQGALLHQM 584
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + +A+ EKA + QQ + K + +
Sbjct: 585 ERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAINAYQQAIQRQKDNPETWKS 644
Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
G LGQ+++AI+ L
Sbjct: 645 LGNSCFKLGQYERAIQAYQESL 666
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G + EAI KA A++ G
Sbjct: 556 ALEAFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAW 615
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D++ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 616 YRLGDYSQAINAYQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSN 671
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 10/200 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + K D E T+ +K+
Sbjct: 516 LNKINDALESYSKAGQFNPQFSQAHYSQGIILQKLDRKSEALE--------AFTQATKAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI+
Sbjct: 568 SNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAINA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACVKLDKENK 517
+ + ++ + K+D E +
Sbjct: 688 ELQQSSQNQTP--KVDSEEQ 705
>gi|159487987|ref|XP_001702004.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281223|gb|EDP06979.1| predicted protein [Chlamydomonas reinhardtii]
Length = 261
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 1/230 (0%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
YA A+ F + +P + RG A Q E AI D+T A+Q +P A+ R
Sbjct: 2 YAGAVEDFSAAIALEPGNADFYHNRGFALRKQGLFERAIHDYTRAVQLHPGHCRAYYNRA 61
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
L +AI D S+AL EP +A LH RG ++ + +AA+ D +A + D
Sbjct: 62 FCHDRLDHVEQAIDDYSRALAMEPTNATALHNRGSLHERAGRPDAAIADFTAAIAADPCC 121
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
++Y G A +G++ A + +AI LD L ++ ++ + E A+ +
Sbjct: 122 AASYNARG-ARRELGDHHGAVQDLTRAIGLDPTDLLSYSRRAHCFRRMGEYESAVTDYTK 180
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ + +K + +R +G + +A+ D ++ L ++P+N Y RA
Sbjct: 181 AISLSPNNAKLHTIRAYCYAMIGWYGEAVADYNTVLALEPTNSHAAYNRA 230
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 33/175 (18%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+ AVED SA + L+ N Y G AL G +++A + +A+QL A+ +
Sbjct: 1 DYAGAVEDFSAAIALEPGNADFYHNRGFALRKQGLFERAIHDYTRAVQLHPGHCRAYYNR 60
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL----------------------- 594
+ L + E+A++ + L ++ + A H RG L
Sbjct: 61 AFCHDRLDHVEQAIDDYSRALAMEPTNATALHNRGSLHERAGRPDAAIADFTAAIAADPC 120
Query: 595 ----------LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG H A++DL+ +G+DP+++ RA C+ +GEY AV
Sbjct: 121 CAASYNARGARRELGDHHGAVQDLTRAIGLDPTDLLSYSRRAHCFRRMGEYESAV 175
>gi|428309115|ref|YP_007120092.1| hypothetical protein Mic7113_0776 [Microcoleus sp. PCC 7113]
gi|428250727|gb|AFZ16686.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 1105
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 119/251 (47%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+++D + G ++EG+Y AI+ +DQ L P P+ +G A ++ + AI+ F
Sbjct: 766 LNLDDYVEHGHTLMSEGRYEEAIASYDQALDLKPNSPDVWYHKGMALWELKQYQDAIAAF 825
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+ ++S P+ +W RG A L AI SK +E +P+ RGI + K
Sbjct: 826 DKVLESKPNDPGSWYHRGLALKELQRYEGAIAAFSKVVEIQPDDYKAWLHRGITLRRLKR 885
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
A+ ++++ + A+ G+A ++ ++A ++ +A+Q+ + + AW +
Sbjct: 886 NEDAIASFDKALEINSDYHEAWVNRGVAFGTLQNQEEAFQSFDRAVQVQPDDVVAWSNRG 945
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
L E+A +V+ KA++ RG +L L + ++A+ L + P
Sbjct: 946 LALGTLERYEEAAASFDKVIEFKPDSHKAWNNRGEMLVKLERDQEALDSFDRALQLQPDF 1005
Query: 619 IECLYLRASCY 629
+ LY +A+CY
Sbjct: 1006 AKALYNKAACY 1016
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
K S D +G+A +Y AI+ FD++L+ P P + RG A + E AI+
Sbjct: 798 KPNSPDVWYHKGMALWELKQYQDAIAAFDKVLESKPNDPGSWYHRGLALKELQRYEGAIA 857
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
F++ ++ P +AW RG L + +AI KALE + + RG+
Sbjct: 858 AFSKVVEIQPDDYKAWLHRGITLRRLKRNEDAIASFDKALEINSDYHEAWVNRGVAFGTL 917
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
++ A + V++ ++ A++ GLAL ++ Y++A + K I+ + +AW +
Sbjct: 918 QNQEEAFQSFDRAVQVQPDDVVAWSNRGLALGTLERYEEAAASFDKVIEFKPDSHKAWNN 977
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+ L ++AL+ + L + F+KA + + + I L + +DP
Sbjct: 978 RGEMLVKLERDQEALDSFDRALQLQPDFAKALYNKAACYARQNEANLVIDHLEKAIRLDP 1037
Query: 617 S 617
S
Sbjct: 1038 S 1038
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 80/176 (45%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G EAI +AL+ +PNS D+ + +G+ ++ K + A+ ++ + ++ +
Sbjct: 782 GRYEEAIASYDQALDLKPNSPDVWYHKGMALWELKQYQDAIAAFDKVLESKPNDPGSWYH 841
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
GLAL + Y+ A A K +++ + +AW H + L +E A+ + L I+
Sbjct: 842 RGLALKELQRYEGAIAAFSKVVEIQPDDYKAWLHRGITLRRLKRNEDAIASFDKALEINS 901
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ +A+ RG+ L ++A + + + P ++ R + Y EA
Sbjct: 902 DYHEAWVNRGVAFGTLQNQEEAFQSFDRAVQVQPDDVVAWSNRGLALGTLERYEEA 957
>gi|113475342|ref|YP_721403.1| hypothetical protein Tery_1657, partial [Trichodesmium erythraeum
IMS101]
gi|110166390|gb|ABG50930.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 594
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 115/234 (49%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ R A GK++ AI D+ ++ +P Y A + R + AIS + ++
Sbjct: 115 VERSAAYTKLGKHSIAIEDADRAIQFEPAYANAYVQRADVDFRLNNYQQAISIYDRGLRL 174
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ +G+ LG+ +A + L+ P ++D + RG + + ++ + A+E
Sbjct: 175 NPNLPLAYYDQGRCFLQLGKKKQAQDCWHEGLKIIPKTSDDYNTRGAILSQLEEHSKALE 234
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++L+ N AY + +A S++G ++ + KA+ L+ N + +G ++
Sbjct: 235 EFQEALRLNNNNIGAYVHRAMAHSALGNHQAVMDNFDKALSLNSNDADIYGWRGIHFEQT 294
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+KA+E + L I+ +++ Y RG LG ++AIKD + L I P+N
Sbjct: 295 GELKKAIEEFDKALQINYKYTVVYAERGKCYSWLGNQQEAIKDFNRALEIAPNN 348
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 34/205 (16%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI+ + +A+Q +P+ +A+ R A LG+ AI+D +A++FEP A+ +R
Sbjct: 94 QGAIAKYNQALQESPNYTKAYVERSAAYTKLGKHSIAIEDADRAIQFEPAYANAYVQRAD 153
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
V+F+ ++ A+ ++L+ AY G +G+ K+A++
Sbjct: 154 VDFRLNNYQQAISIYDRGLRLNPNLPLAYYDQGRCFLQLGKKKQAQD------------- 200
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
C + L I + S Y+ RG +L L +H KA+++
Sbjct: 201 ---------------------CWHEGLKIIPKTSDDYNTRGAILSQLEEHSKALEEFQEA 239
Query: 612 LGIDPSNIECLYLRASCYHAIGEYR 636
L ++ +NI RA + A+G ++
Sbjct: 240 LRLNNNNIGAYVHRAMAHSALGNHQ 264
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 16/266 (6%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VDFRL+ Y AISI+D+ L+ +P P A +G + + A + E
Sbjct: 154 VDFRLNN---------YQQAISIYDRGLRLNPNLPLAYYDQGRCFLQLGKKKQAQDCWHE 204
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
++ P + + RG + L E +A+++ +AL N+ R + + +
Sbjct: 205 GLKIIPKTSDDYNTRGAILSQLEEHSKALEEFQEALRLNNNNIGAYVHRAMAHSALGNHQ 264
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A +++ + L+ + Y + G+ GE KKA E KA+Q++ + + +
Sbjct: 265 AVMDNFDKALSLNSNDADIYGWRGIHFEQTGELKKAIEEFDKALQINYKYTVVYAERGKC 324
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN-- 618
Y L N ++A++ + L I S AY G L ++A + L ++P+N
Sbjct: 325 YSWLGNQQEAIKDFNRALEIAPNNSYAYDALGTAYLYLNDIEEAEQKFKKALKLNPNNPL 384
Query: 619 ----IECLY-LRASCYHAIGEYREAV 639
I ++ + AI Y+EA+
Sbjct: 385 AHCGIGVVFGFKEKWEEAIAAYQEAL 410
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 104/233 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ R +A G + + + FD+ L + + RG EL+ AI +F +A+Q
Sbjct: 251 VHRAMAHSALGNHQAVMDNFDKALSLNSNDADIYGWRGIHFEQTGELKKAIEEFDKALQI 310
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + RG+ + LG EAI+D ++ALE PN++ G D A +
Sbjct: 311 NYKYTVVYAERGKCYSWLGNQQEAIKDFNRALEIAPNNSYAYDALGTAYLYLNDIEEAEQ 370
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+KL+ N A+ +G+ ++++A A+ +A+ ++ + + L Q +
Sbjct: 371 KFKKALKLNPNNPLAHCGIGVVFGFKEKWEEAIAAYQEALCIEPKLAQGYDGLGQAFFMQ 430
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++A+ ++ L I F+ ++ G+ L + +A+ + +DP+
Sbjct: 431 GKLDEAIHAYKKALGIAPNFTIVHNKLGVALEQQKKEDEAVAAYKEAISLDPN 483
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI G+ AI FD+ L+ + Y RG ++ + AI DF A++ P
Sbjct: 287 RGIHFEQTGELKKAIEEFDKALQINYKYTVVYAERGKCYSWLGNQQEAIKDFNRALEIAP 346
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI-VNFKFKD-FNAAVE 504
+ A+ G A L + EA Q KAL+ PN+ L GI V F FK+ + A+
Sbjct: 347 NNSYAYDALGTAYLYLNDIEEAEQKFKKALKLNPNNP--LAHCGIGVVFGFKEKWEEAIA 404
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++ + Y LG A G+ +A A+ KA+ + NF L +
Sbjct: 405 AYQEALCIEPKLAQGYDGLGQAFFMQGKLDEAIHAYKKALGIAPNFTIVHNKLGVALEQQ 464
Query: 565 ANSEKALECLQQVLYIDKRFSKA 587
++A+ ++ + +D F+ A
Sbjct: 465 KKEDEAVAAYKEAISLDPNFATA 487
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 51/232 (21%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
F + LK +P P A G G F+ + E AI+ + EA+ P + + GQA G
Sbjct: 372 FKKALKLNPNNPLAHCGIGVVFGFKEKWEEAIAAYQEALCIEPKLAQGYDGLGQAFFMQG 431
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
+ EAI KAL PN I+H + L
Sbjct: 432 KLDEAIHAYKKALGIAPNFT-IVHNK---------------------------------L 457
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL--TQFYQD-----LANSEKALECLQ- 575
G+AL + +A A+ +AI LD NF A +L QD +AN +KA + Q
Sbjct: 458 GVALEQQKKEDEAVAAYKEAISLDPNFATARANLGYALLKQDRTTDGIANLKKARDLFQT 517
Query: 576 -----QVLYID----KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ ID KR S++++ +G L G++++AI + + +DPS+
Sbjct: 518 QNQDKEASKIDNFLCKRESESHYRKGEKLSKQGKYQEAIAEYEEAIRLDPSH 569
>gi|434394467|ref|YP_007129414.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428266308|gb|AFZ32254.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 256
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 79/145 (54%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
+K I+ + ++G+ ++ + Y+ AI F Q L+ + + A + RG R + E AI
Sbjct: 66 TKEINAEQFTNQGLEKLQQQDYSGAIQAFSQALQLNSNHEMAYVYRGDTRQKLEDYEGAI 125
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D+T A+QSNP+ + RG AR ALG+ AI D ++A++ P A +RG V +
Sbjct: 126 EDYTLALQSNPNFAYIYNSRGDARVALGDYQSAIADYTQAIKLYPEDAFGYSDRGSVYLQ 185
Query: 496 FKDFNAAVEDLSACVKLDKENKSAY 520
+ A+EDL+ ++++ E AY
Sbjct: 186 IGNIGKAIEDLNKAIQINPERAEAY 210
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E +G + Q++ AI F++A+Q N + A+ RG R L + AI+D + A
Sbjct: 72 EQFTNQGLEKLQQQDYSGAIQAFSQALQLNSNHEMAYVYRGDTRQKLEDYEGAIEDYTLA 131
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
L+ PN A I + RG D+ +A+ D + +KL E+ Y+ G IG K
Sbjct: 132 LQSNPNFAYIYNSRGDARVALGDYQSAIADYTQAIKLYPEDAFGYSDRGSVYLQIGNIGK 191
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
A E KAIQ++ EA+ H Q + N + L+
Sbjct: 192 AIEDLNKAIQINPERAEAYFHRAQVHAKFKNRQATLQ 228
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI + L+ +P + RG AR + ++AI+D+T+AI+ P + RG
Sbjct: 121 YEGAIEDYTLALQSNPNFAYIYNSRGDARVALGDYQSAIADYTQAIKLYPEDAFGYSDRG 180
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
+G +AI+DL+KA++ P A+ R V+ KFK+ A ++D ++L E
Sbjct: 181 SVYLQIGNIGKAIEDLNKAIQINPERAEAYFHRAQVHAKFKNRQATLQDYRTAIQLYTE 239
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG---RGTARAFQRELEAAISDFTEAI 442
SRG A+V G Y SAI+ + Q +K +YPE G RG+ + AI D +AI
Sbjct: 144 SRGDARVALGDYQSAIADYTQAIK---LYPEDAFGYSDRGSVYLQIGNIGKAIEDLNKAI 200
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
Q NP EA+ R Q A +QD A++ +I+
Sbjct: 201 QINPERAEAYFHRAQVHAKFKNRQATLQDYRTAIQLYTEQGNIV 244
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+A+ +G+ + +D++ A++ S ++L+ ++ AY Y G + +Y+ A E +
Sbjct: 70 NAEQFTNQGLEKLQQQDYSGAIQAFSQALQLNSNHEMAYVYRGDTRQKLEDYEGAIEDYT 129
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
A+Q + NF + L + + A+ Q + + + Y RG + +G
Sbjct: 130 LALQSNPNFAYIYNSRGDARVALGDYQSAIADYTQAIKLYPEDAFGYSDRGSVYLQIGNI 189
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
KAI+DL+ + I+P E + RA HA + R+A +
Sbjct: 190 GKAIEDLNKAIQINPERAEAYFHRAQV-HAKFKNRQATL 227
>gi|325959562|ref|YP_004291028.1| hypothetical protein Metbo_1834 [Methanobacterium sp. AL-21]
gi|325330994|gb|ADZ10056.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. AL-21]
Length = 693
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 126/268 (47%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R+ + S V + Q N K+ +I ++I DP EA G ++ + +
Sbjct: 395 RVLEIDSNQVAALFLKARTQQNIAKFDESIETLERITSIDPDNDEAWFLIGVSQEYLNKP 454
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A+ F +AI+ P AW +G++ LG + EA++ +P + + H G+
Sbjct: 455 EDALVSFNKAIEIEPKNIGAWYFKGRSLMMLGRADEALKSYEMVTLMDPENYEAFHLTGL 514
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+N + +++ A+++ A + + +N G A + + +KA E +A+ L+ + +
Sbjct: 515 INMEQGNYDEALKNFDAVLNISPDNIDVLINKGQAYGFMDKPEKALEYFDEALDLESDNV 574
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA + + + + + +++ + VL ++ A+H GL +G+++KAI+ +
Sbjct: 575 EALNYRGVALKHMGDHDASIKTFEAVLEMEPENPWAWHQIGLNYKEVGEYEKAIESFDNA 634
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
L DP + L + C +++EA+
Sbjct: 635 LDEDPKFLLALLEKGVCLGMNKQFKEAL 662
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 120/270 (44%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ + + S D +G A G+ AI F+ L +P++ E+ +G A +
Sbjct: 155 INEVLEEVSDDPDLYFKKGNALGGLGRTDEAIEAFETSLNLNPLFVESWNAKGVAYSMLE 214
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
A+ F AI + W + + + E EA KA++ P + + ++
Sbjct: 215 CYSDALICFDHAIDLDVDDDRGWFLKAETLTKMNELKEAFDCYKKAVDLNPLNTEGWYKL 274
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+V + K F ++E + L+ ++ + + L+L I E+++ + A+++D
Sbjct: 275 GLVLYNLKQFPQSIESYDRALDLEPKSAAIWNSKALSLYEIHEHEEEIGCYNHALEIDPE 334
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
F EAW + Y L +E+AL CL++ L ++ A + +L + + AI
Sbjct: 335 FSEAWTNKGATYLTLGRNEEALVCLEKALELNPNDQTALMNKASVLISVEDYDDAILYCD 394
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L ID + + L+L+A I ++ E++
Sbjct: 395 RVLEIDSNQVAALFLKARTQQNIAKFDESI 424
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 124/305 (40%), Gaps = 34/305 (11%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C + ++ + G+ N ++ +I +D+ L +P + +
Sbjct: 256 CYKKAVDLNPLNTEGWYKLGLVLYNLKQFPQSIESYDRALDLEPKSAAIWNSKALSLYEI 315
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E E I + A++ +P EAW +G LG + EA+ L KALE PN L
Sbjct: 316 HEHEEEIGCYNHALEIDPEFSEAWTNKGATYLTLGRNEEALVCLEKALELNPNDQTALMN 375
Query: 489 RGIVNFKFKD----------------------------------FNAAVEDLSACVKLDK 514
+ V +D F+ ++E L +D
Sbjct: 376 KASVLISVEDYDDAILYCDRVLEIDSNQVAALFLKARTQQNIAKFDESIETLERITSIDP 435
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N A+ +G++ + + + A + KAI+++ + AW + L +++AL+
Sbjct: 436 DNDEAWFLIGVSQEYLNKPEDALVSFNKAIEIEPKNIGAWYFKGRSLMMLGRADEALKSY 495
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ V +D +A+HL GL+ G + +A+K+ + L I P NI+ L + Y + +
Sbjct: 496 EMVTLMDPENYEAFHLTGLINMEQGNYDEALKNFDAVLNISPDNIDVLINKGQAYGFMDK 555
Query: 635 YREAV 639
+A+
Sbjct: 556 PEKAL 560
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 104/243 (42%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI D++L+ D AL + + + + +I +P EAW G
Sbjct: 386 YDDAILYCDRVLEIDSNQVAALFLKARTQQNIAKFDESIETLERITSIDPDNDEAWFLIG 445
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
++ L + +A+ +KA+E EP + + +G + A++ +D EN
Sbjct: 446 VSQEYLNKPEDALVSFNKAIEIEPKNIGAWYFKGRSLMMLGRADEALKSYEMVTLMDPEN 505
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A+ GL G Y +A + + + + ++ + Q Y + EKALE +
Sbjct: 506 YEAFHLTGLINMEQGNYDEALKNFDAVLNISPDNIDVLINKGQAYGFMDKPEKALEYFDE 565
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
L ++ +A + RG+ L +G H +IK + L ++P N + Y +GEY
Sbjct: 566 ALDLESDNVEALNYRGVALKHMGDHDASIKTFEAVLEMEPENPWAWHQIGLNYKEVGEYE 625
Query: 637 EAV 639
+A+
Sbjct: 626 KAI 628
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 87/225 (38%), Gaps = 49/225 (21%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F L+ G+ + +G Y A+ FD +L P + LI +G A F + E A+ F EA+
Sbjct: 509 FHLT-GLINMEQGNYDEALKNFDAVLNISPDNIDVLINKGQAYGFMDKPEKALEYFDEAL 567
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
EA RG A +G+ +I+ LE EP
Sbjct: 568 DLESDNVEALNYRGVALKHMGDHDASIKTFEAVLEMEP---------------------- 605
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA-------WG 555
EN A+ +GL +GEY+KA E+ A+ D FL A G
Sbjct: 606 ------------ENPWAWHQIGLNYKEVGEYEKAIESFDNALDEDPKFLLALLEKGVCLG 653
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
QF ++ALEC VL D + A + + + + +
Sbjct: 654 MNKQF-------KEALECFDDVLIKDPQNPDALQFKNMTIQMMNE 691
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 118/280 (42%), Gaps = 34/280 (12%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G + A+ +FD+ILK L + + A++ E ++ + + +
Sbjct: 112 GNFEGALILFDEILKTTDNKNSVLKEKTNCLLNLERYDDALNSINEVLEEVSDDPDLYFK 171
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG + EAI+ +L P + + +G+ + ++ A+ + LD
Sbjct: 172 KGNALGGLGRTDEAIEAFETSLNLNPLFVESWNAKGVAYSMLECYSDALICFDHAIDLDV 231
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANS 567
++ + L+ + E K+A + + KA+ L+ E W +L QF Q + +
Sbjct: 232 DDDRGWFLKAETLTKMNELKEAFDCYKKAVDLNPLNTEGWYKLGLVLYNLKQFPQSIESY 291
Query: 568 EKALE---------------------------CLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
++AL+ C L ID FS+A+ +G LG+
Sbjct: 292 DRALDLEPKSAAIWNSKALSLYEIHEHEEEIGCYNHALEIDPEFSEAWTNKGATYLTLGR 351
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+++A+ L L ++P++ L +AS ++ +Y +A++
Sbjct: 352 NEEALVCLEKALELNPNDQTALMNKASVLISVEDYDDAIL 391
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 106/253 (41%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A + GK AI FD+ L P YP AL A + ++ F +A++ +P
Sbjct: 36 KGMALMGLGKINEAIECFDKSLAIMPNYPWALDNMCMALLLVERYDESLECFDKALEIHP 95
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +++G A+ + L+ N +L E+ + ++ A+ +
Sbjct: 96 DDEVLINNKAFLLSSMGNFEGALILFDEILKTTDNKNSVLKEKTNCLLNLERYDDALNSI 155
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++ ++ Y G AL +G +A EA ++ L+ F+E+W Y L
Sbjct: 156 NEVLEEVSDDPDLYFKKGNALGGLGRTDEAIEAFETSLNLNPLFVESWNAKGVAYSMLEC 215
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
AL C + +D + + L+ L + + K+A + ++P N E Y
Sbjct: 216 YSDALICFDHAIDLDVDDDRGWFLKAETLTKMNELKEAFDCYKKAVDLNPLNTEGWYKLG 275
Query: 627 SCYHAIGEYREAV 639
+ + ++ +++
Sbjct: 276 LVLYNLKQFPQSI 288
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 117/288 (40%), Gaps = 34/288 (11%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A Y+ A+ FD + D + EL+ A + +A+ N
Sbjct: 205 AKGVAYSMLECYSDALICFDHAIDLDVDDDRGWFLKAETLTKMNELKEAFDCYKKAVDLN 264
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E W + G L + ++I+ +AL+ EP SA I + + + ++ + +
Sbjct: 265 PLNTEGWYKLGLVLYNLKQFPQSIESYDRALDLEPKSAAIWNSKALSLYEIHEHEEEIGC 324
Query: 506 LSACVKLDKENKSAY-----TYLGL-----------------------------ALSSIG 531
+ +++D E A+ TYL L L S+
Sbjct: 325 YNHALEIDPEFSEAWTNKGATYLTLGRNEEALVCLEKALELNPNDQTALMNKASVLISVE 384
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
+Y A + +++D N + A + Q++A ++++E L+++ ID +A+ L
Sbjct: 385 DYDDAILYCDRVLEIDSNQVAALFLKARTQQNIAKFDESIETLERITSIDPDNDEAWFLI 444
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
G+ L + + A+ + + I+P NI Y + +G EA+
Sbjct: 445 GVSQEYLNKPEDALVSFNKAIEIEPKNIGAWYFKGRSLMMLGRADEAL 492
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 86/201 (42%)
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
E +++N E W R+G A LG+ EAI+ K+L PN L + + +
Sbjct: 21 ELLKTNSEDYETWTRKGMALMGLGKINEAIECFDKSLAIMPNYPWALDNMCMALLLVERY 80
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
+ ++E +++ +++ LSS+G ++ A + ++ N T
Sbjct: 81 DESLECFDKALEIHPDDEVLINNKAFLLSSMGNFEGALILFDEILKTTDNKNSVLKEKTN 140
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+L + AL + +VL Y +G L GLG+ +AI+ + L ++P +
Sbjct: 141 CLLNLERYDDALNSINEVLEEVSDDPDLYFKKGNALGGLGRTDEAIEAFETSLNLNPLFV 200
Query: 620 ECLYLRASCYHAIGEYREAVI 640
E + Y + Y +A+I
Sbjct: 201 ESWNAKGVAYSMLECYSDALI 221
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++D +++G A K A+ FD+ L + EAL RG A + +A+I F
Sbjct: 539 NIDVLINKGQAYGFMDKPEKALEYFDEALDLESDNVEALNYRGVALKHMGDHDASIKTFE 598
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
++ P AW + G +GE +AI+ AL+ +P L E+G+ K F
Sbjct: 599 AVLEMEPENPWAWHQIGLNYKEVGEYEKAIESFDNALDEDPKFLLALLEKGVCLGMNKQF 658
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
A+E + D +N A + + + + E
Sbjct: 659 KEALECFDDVLIKDPQNPDALQFKNMTIQMMNE 691
>gi|156741814|ref|YP_001431943.1| hypothetical protein Rcas_1834 [Roseiflexus castenholzii DSM 13941]
gi|156233142|gb|ABU57925.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii
DSM 13941]
Length = 593
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+TEAI+++PS+ EA+ R Q L A+ D ++AL +P +A+ H+R ++ +
Sbjct: 328 YTEAIRADPSSFEAYFGRAQVNFNLSLFQNAVDDFTRALALDPENAEAYHQRARAFYRLQ 387
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
++ A+ D + + D N G+A G+Y +A +++QL+ + + H
Sbjct: 388 QYDEAIRDFTEALARDPNNDVLLMRRGVAYRDKGQYDEALADFDQSLQLNPDVSFTYYHR 447
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+Q E+A + L I + AY RG L G + A++D + + +D +
Sbjct: 448 ALLFQATGRLERARADFDRALTIAPEYRLAYVGRGGLRLEQGDARGALRDCTRAIELDAT 507
Query: 618 NIECLYLRASCYHAIGEYREAV 639
I+ + RA A+ +YR AV
Sbjct: 508 EIDAYFCRARAAIALRDYRAAV 529
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAISDFT 439
+ RG+A ++G+Y A++ FDQ L+ +P Y AL+ + T R LE A +DF
Sbjct: 411 MRRGVAYRDKGQYDEALADFDQSLQLNPDVSFTYYHRALLFQATGR-----LERARADFD 465
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
A+ P A+ RG R G++ A++D ++A+E + D R +D+
Sbjct: 466 RALTIAPEYRLAYVGRGGLRLEQGDARGALRDCTRAIELDATEIDAYFCRARAAIALRDY 525
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
AAV DL + D ++ AY G A ++ + +A + +AI+L R L
Sbjct: 526 RAAVADLDTVIARDPDSADAYRERGRAHQALRDTDEARADYQRAIELYR--------LQG 577
Query: 560 FYQDLANSEKALECLQ 575
+DLA EK L L+
Sbjct: 578 RDKDLAEVEKLLAALK 593
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+A R + AA G +A + ++A+ +P+S + R VNF F AV+D +
Sbjct: 306 QALVREAEELAASGSLGQAAERYTEAIRADPSSFEAYFGRAQVNFNLSLFQNAVDDFTRA 365
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ LD EN AY A + +Y +A +A+ D N Y+D ++
Sbjct: 366 LALDPENAEAYHQRARAFYRLQQYDEAIRDFTEALARDPNNDVLLMRRGVAYRDKGQYDE 425
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
AL Q L ++ S Y+ R LL G+ ++A D L I P
Sbjct: 426 ALADFDQSLQLNPDVSFTYYHRALLFQATGRLERARADFDRALTIAP 472
>gi|218245568|ref|YP_002370939.1| hypothetical protein PCC8801_0698 [Cyanothece sp. PCC 8801]
gi|218166046|gb|ACK64783.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
Length = 784
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 123/259 (47%), Gaps = 13/259 (5%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL--IGRGTARAFQRELEAAISDFTE 440
F++ I +N Y A+ I P Y + +G R +Q E AI +
Sbjct: 253 FKVGYPIEGINS--YYEAVDI-------SPNYIQVWERLGFILFRIYQYE--EAIFCLDK 301
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I P+ +W RG ++LG EA++ L +ALE PN + I +G + + +++
Sbjct: 302 VINIKPNDDSSWHLRGLCLSSLGRLEEALESLDQALEVNPNDSFIWGNKGKLLNQLEEYQ 361
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ + ++LD EN + G LS + +Y++A + KA+++ N+ EAWG
Sbjct: 362 QALLSFNRSLELDPENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSNYYEAWGMRGVI 421
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+L ++AL +++ I+ + + RG+ L L +H++A+K L+ L I+ +
Sbjct: 422 LVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLNKALEINSDDDM 481
Query: 621 CLYLRASCYHAIGEYREAV 639
+ +G Y+EA+
Sbjct: 482 IWGNKGVVLRNLGHYQEAL 500
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 127/273 (46%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
FC+ ++ K RG+ + G+ A+ DQ L+ +P +G
Sbjct: 297 FCLDKVINIKPNDDSSWHLRGLCLSSLGRLEEALESLDQALEVNPNDSFIWGNKGKLLNQ 356
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
E + A+ F +++ +P E W +G+ + L + EA+ KALE N +
Sbjct: 357 LEEYQQALLSFNRSLELDPENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSNYYEAWG 416
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG++ + + A+ ++++ + + G+AL + +++A ++ KA++++
Sbjct: 417 MRGVILVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLNKALEIN 476
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ WG+ ++L + ++ALE + +D + + +G+ L L Q+++A+K
Sbjct: 477 SDDDMIWGNKGVVLRNLGHYQEALESFDNAIKLDFNNDRGWFHKGITLIKLKQYQEALKC 536
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L L IDP++ L + + + + Y +A+I
Sbjct: 537 LDKALEIDPNDHNTLIEKGNTLYLLQCYEQALI 569
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ F++ L+ DP E +G + ++ E A++ F +A++ + + EAW R
Sbjct: 359 EYQQALLSFNRSLELDPENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSNYYEAWGMR 418
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G L +A+ K +E PN RGI K A++ L+ ++++ +
Sbjct: 419 GVILVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLNKALEINSD 478
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ + G+ L ++G Y++A E+ AI+LD N W H L ++AL+CL
Sbjct: 479 DDMIWGNKGVVLRNLGHYQEALESFDNAIKLDFNNDRGWFHKGITLIKLKQYQEALKCLD 538
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ L ID +G L+ L +++A+ + ++P++
Sbjct: 539 KALEIDPNDHNTLIEKGNTLYLLQCYEQALISFKKAIEVNPND 581
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 116/244 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y AI D+++ P + RG + LE A+ +A++ NP+ W +
Sbjct: 291 QYEEAIFCLDKVINIKPNDDSSWHLRGLCLSSLGRLEEALESLDQALEVNPNDSFIWGNK 350
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G+ L E +A+ +++LE +P + +I + +G V + K + A+ +++
Sbjct: 351 GKLLNQLEEYQQALLSFNRSLELDPENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSN 410
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ G+ L ++ YK+A + K I+++ N + W + L ++AL+ L
Sbjct: 411 YYEAWGMRGVILVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLN 470
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ L I+ + +G++L LG +++A++ + + +D +N + + + +Y
Sbjct: 471 KALEINSDDDMIWGNKGVVLRNLGHYQEALESFDNAIKLDFNNDRGWFHKGITLIKLKQY 530
Query: 636 REAV 639
+EA+
Sbjct: 531 QEAL 534
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 89/187 (47%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++G +G +E I +A++ PN + G + F+ + A+ L + +
Sbjct: 247 KKGNLLFKVGYPIEGINSYYEAVDISPNYIQVWERLGFILFRIYQYEEAIFCLDKVINIK 306
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ S++ GL LSS+G ++A E+ +A++++ N WG+ + L ++AL
Sbjct: 307 PNDDSSWHLRGLCLSSLGRLEEALESLDQALEVNPNDSFIWGNKGKLLNQLEEYQQALLS 366
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ L +D + ++L+G +L L ++++A+ L I + E +R +
Sbjct: 367 FNRSLELDPENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSNYYEAWGMRGVILVNLQ 426
Query: 634 EYREAVI 640
Y++A+I
Sbjct: 427 YYKQALI 433
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 115/256 (44%), Gaps = 7/256 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ VN Y A+ FD++++ +P + + RG A + + + A+ +A++ N
Sbjct: 418 RGVILVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLNKALEINS 477
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
W +G LG EA++ A++ + N+ +GI K K + A++ L
Sbjct: 478 DDDMIWGNKGVVLRNLGHYQEALESFDNAIKLDFNNDRGWFHKGITLIKLKQYQEALKCL 537
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQD 563
+++D + + G L + Y++A + KAI+++ N + W G+L Q
Sbjct: 538 DKALEIDPNDHNTLIEKGNTLYLLQCYEQALISFKKAIEVNPNDSDDWNACGYLL-LNQS 596
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
AN + + +++ I SK L L+ +++A+ + + P
Sbjct: 597 SANDQPVFDIPLEIIPIVN--SKNNQLNE-SLNNQKSYQEALSYFDKAIELKPDYSLVFA 653
Query: 624 LRASCYHAIGEYREAV 639
R+ + +GEY+EA+
Sbjct: 654 NRSFPLYYLGEYQEAL 669
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 43/260 (16%)
Query: 378 SISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+I +DF +GI + +Y A+ D+ L+ DP LI +G + E
Sbjct: 506 AIKLDFNNDRGWFHKGITLIKLKQYQEALKCLDKALEIDPNDHNTLIEKGNTLYLLQCYE 565
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK-ALEFEP--NSADILHER 489
A+ F +AI+ NP+ + W G L +S Q + LE P NS +
Sbjct: 566 QALISFKKAIEVNPNDSDDWNACG--YLLLNQSSANDQPVFDIPLEIIPIVNSKNNQLNE 623
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ N K + A+ ++L + + L +GEY++A ++ +KAI+L +
Sbjct: 624 SLNNQK--SYQEALSYFDKAIELKPDYSLVFANRSFPLYYLGEYQEALKSCIKAIKLKPH 681
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ +T LAN +G +L L ++K+A+
Sbjct: 682 --KEVKEIT-----LAN------------------------KGFILMKLERYKQALSTFK 710
Query: 610 SGLGIDPSNIECLYLRASCY 629
L ++P++ LY A CY
Sbjct: 711 EVLKLNPNHQNVLYKIACCY 730
>gi|414076244|ref|YP_006995562.1| TPR repeat-containing proptein [Anabaena sp. 90]
gi|413969660|gb|AFW93749.1| TPR repeat-containing proptein [Anabaena sp. 90]
Length = 972
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q G +A++++++ + P E +G + + AI+ + + + P
Sbjct: 313 GLRQAKAGDLLNALALYERASQIQPHVYEYWFNQGLVLFYLQRFSEAIAAYDQTLALKPD 372
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ W RG LG+ AI +A+ +P+ RG+ K A++
Sbjct: 373 FYQVWYSRGSILGELGDFDAAIASFDQAIAIKPDYQAAWSSRGLALLKLGLIGEAIDSYD 432
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
V L+ ++ A+ Y G+AL+ + +Y +A ++ +A+ L N+ E W +L
Sbjct: 433 QAVNLEPQDSEAWYYRGIALAVVEQYAEAIASYDQALNLQPNYHEVWIDRGVVLFNLKQW 492
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+A+E Q L I F A++ RG+ LG+ + AI + I P
Sbjct: 493 LEAIESWDQALAIQPEFYLAWYNRGVSFEHLGRREDAISSYQQAIAIKP 541
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 108/243 (44%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R S+ + ++ ++G+ +++ AI+ +DQ L P + + RG+ +
Sbjct: 331 RASQIQPHVYEYWFNQGLVLFYLQRFSEAIAAYDQTLALKPDFYQVWYSRGSILGELGDF 390
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI+ F +AI P AW RG A LG EAI +A+ EP ++ + RGI
Sbjct: 391 DAAIASFDQAIAIKPDYQAAWSSRGLALLKLGLIGEAIDSYDQAVNLEPQDSEAWYYRGI 450
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + A+ + L + G+ L ++ ++ +A E+ +A+ + F
Sbjct: 451 ALAVVEQYAEAIASYDQALNLQPNYHEVWIDRGVVLFNLKQWLEAIESWDQALAIQPEFY 510
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
AW + ++ L E A+ QQ + I F A++ + + L L + +AI
Sbjct: 511 LAWYNRGVSFEHLGRREDAISSYQQAIAIKPDFHPAWYNQAVALFYLDRSAQAISGYDRA 570
Query: 612 LGI 614
L I
Sbjct: 571 LEI 573
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 4/222 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG G + +AI+ FDQ + P Y A RG A + AI + +A+
Sbjct: 379 SRGSILGELGDFDAAIASFDQAIAIKPDYQAAWSSRGLALLKLGLIGEAIDSYDQAVNLE 438
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A A + + EAI +AL +PN ++ +RG+V F K + A+E
Sbjct: 439 PQDSEAWYYRGIALAVVEQYAEAIASYDQALNLQPNYHEVWIDRGVVLFNLKQWLEAIES 498
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
+ + E A+ G++ +G + A ++ +AI + +F AW + + FY D
Sbjct: 499 WDQALAIQPEFYLAWYNRGVSFEHLGRREDAISSYQQAIAIKPDFHPAWYNQAVALFYLD 558
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
S +A+ + L I + +A+ RG L H+ ++
Sbjct: 559 --RSAQAISGYDRALEIKLDYWEAWLGRGAAAGHLTPHQSSL 598
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG+ N ++ AI +DQ L P + A RG + E AIS + +AI
Sbjct: 480 IDRGVVLFNLKQWLEAIESWDQALAIQPEFYLAWYNRGVSFEHLGRREDAISSYQQAIAI 539
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
P AW + A L S +AI +ALE + + + RG
Sbjct: 540 KPDFHPAWYNQAVALFYLDRSAQAISGYDRALEIKLDYWEAWLGRG 585
>gi|113477065|ref|YP_723126.1| hypothetical protein Tery_3569 [Trichodesmium erythraeum IMS101]
gi|110168113|gb|ABG52653.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 314
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GKY AI FD+ +K P Y A RG A L A+++F AI P+ AW
Sbjct: 26 GKYQHAIIAFDKAIKIKPDYYAAWNNRGNALKILGRLHLALNNFNLAINMEPNYYLAWYN 85
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG LG EAI KA++ +P+ + GI + + A E+ K+
Sbjct: 86 RGNLLNDLGRYQEAISSFEKAIQIQPSFYQAWYNLGISWNRLGHYQEAFENYQQATKIKP 145
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALE 572
+ G L +G Y+++ ++ + I+L N AW T FY L ++E +
Sbjct: 146 NLYQGWYNEGRVLFDLGRYQRSLKSFEQVIKLKPNHYRAWNFKGKTLFY--LGDAEGEIM 203
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
++ + + + +A++ G L G KAI + I P Y +A CY
Sbjct: 204 SYEKAIEVKIDYQEAWNNLGQALSNSGNWYKAIICFDKAIEIKPGYSLAYYNKARCY 260
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 3/224 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ I D+ + RG A G+ A++ F+ + +P Y A RG
Sbjct: 31 AIIAFDKAIKIKPDYYAAWNNRGNALKILGRLHLALNNFNLAINMEPNYYLAWYNRGNLL 90
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ AIS F +AIQ PS +AW G + LG EA ++ +A + +PN
Sbjct: 91 NDLGRYQEAISSFEKAIQIQPSFYQAWYNLGISWNRLGHYQEAFENYQQATKIKPNLYQG 150
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ G V F + +++ +KL + A+ + G L +G+ + ++ KAI+
Sbjct: 151 WYNEGRVLFDLGRYQRSLKSFEQVIKLKPNHYRAWNFKGKTLFYLGDAEGEIMSYEKAIE 210
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+ ++ EAW +L Q + N KA+ C + + I +S AY+
Sbjct: 211 VKIDYQEAWNNLGQALSNSGNWYKAIICFDKAIEIKPGYSLAYY 254
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 34/201 (16%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI F +AI+ P AW RG A LG A+ + + A+ EPN + RG +
Sbjct: 31 AIIAFDKAIKIKPDYYAAWNNRGNALKILGRLHLALNNFNLAINMEPNYYLAWYNRGNL- 89
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
L+ +G Y++A + KAIQ+ +F +A
Sbjct: 90 ---------------------------------LNDLGRYQEAISSFEKAIQIQPSFYQA 116
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
W +L + L + ++A E QQ I + ++ G +L LG++++++K +
Sbjct: 117 WYNLGISWNRLGHYQEAFENYQQATKIKPNLYQGWYNEGRVLFDLGRYQRSLKSFEQVIK 176
Query: 614 IDPSNIECLYLRASCYHAIGE 634
+ P++ + +G+
Sbjct: 177 LKPNHYRAWNFKGKTLFYLGD 197
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%)
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G+ LS++G+Y+ A A KAI++ ++ AW + + L AL + ++
Sbjct: 19 GVNLSTLGKYQHAIIAFDKAIKIKPDYYAAWNNRGNALKILGRLHLALNNFNLAINMEPN 78
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ A++ RG LL+ LG++++AI + I PS + Y ++ +G Y+EA
Sbjct: 79 YYLAWYNRGNLLNDLGRYQEAISSFEKAIQIQPSFYQAWYNLGISWNRLGHYQEAF 134
>gi|226310316|ref|YP_002770210.1| hypothetical protein BBR47_07290 [Brevibacillus brevis NBRC 100599]
gi|226093264|dbj|BAH41706.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 731
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 115/250 (46%), Gaps = 2/250 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ V ++ A F Q+++ D YPE RG + L+ AI D+ +AI+ +
Sbjct: 449 NKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEAIEDYNQAIKLS 508
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E + R A LG+ +A+ D L+ +P + D L R + ++ + F A +D
Sbjct: 509 PPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMARKD 568
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++++ ++ LGL S G +A + A+ D+ + AW + Y ++
Sbjct: 569 AEFGLEIEPDHARLLCTLGLIEMSDGNNDQALKTFTAALNKDKEMMAAWTNRAVLYYEMG 628
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI-DPSNIECLYL 624
++A+ L + + ++K + Y+ R + + + +I D + L D + Y
Sbjct: 629 EYDRAIADLTEAMALEKNATVLYN-RAWVYEAQEEWQLSISDYTEALAFSDADEQDIYYR 687
Query: 625 RASCYHAIGE 634
R C+ +G+
Sbjct: 688 RGLCFIKMGD 697
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 98/222 (44%), Gaps = 1/222 (0%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L +G + E A F++ IQ + + E + RG + +G EAI+D ++A++
Sbjct: 447 LHNKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEAIEDYNQAIK 506
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P ++ R + D A+ D + +D EN L + +++ A
Sbjct: 507 LSPPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMAR 566
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ ++++ + L N+++AL+ L DK A+ R +L +
Sbjct: 567 KDAEFGLEIEPDHARLLCTLGLIEMSDGNNDQALKTFTAALNKDKEMMAAWTNRAVLYYE 626
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+G++ +AI DL+ + ++ N LY RA Y A E++ ++
Sbjct: 627 MGEYDRAIADLTEAMALE-KNATVLYNRAWVYEAQEEWQLSI 667
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 118/275 (42%), Gaps = 15/275 (5%)
Query: 366 KKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
K+F + S+ I +D + RG G+ AI ++Q +K P +PE
Sbjct: 458 KRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEAIEDYNQAIKLSPPFPEVYFN 517
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R TA ++E A++D+ + +P + R + + A +D LE EP
Sbjct: 518 RATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMARKDAEFGLEIEP 577
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ A +L G++ + + A++ +A + DKE +A+T + +GEY +A
Sbjct: 578 DHARLLCTLGLIEMSDGNNDQALKTFTAALNKDKEMMAAWTNRAVLYYEMGEYDRAIADL 637
Query: 541 LKAIQLDRN----FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+A+ L++N + AW + Q L+ S+ + + + D Y+ RGL
Sbjct: 638 TEAMALEKNATVLYNRAWVYEAQEEWQLSISDYT----EALAFSDADEQDIYYRRGLCFI 693
Query: 597 GLGQHKKAIKDLSSGL--GIDPSNIECLYLRASCY 629
+G + +D + L G P E + L S +
Sbjct: 694 KMGDRELGTEDWNKHLMFGESPHVNEMMQLLPSLF 728
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%)
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+LH +G++ K F A E S +++D Y G S +G +A E + +AI
Sbjct: 446 LLHNKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEAIEDYNQAI 505
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+L F E + + + L + EKA+ +L ID R LL+ + + + A
Sbjct: 506 KLSPPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMA 565
Query: 605 IKDLSSGLGIDPSNIECL 622
KD GL I+P + L
Sbjct: 566 RKDAEFGLEIEPDHARLL 583
>gi|428772263|ref|YP_007164051.1| hypothetical protein Cyast_0422 [Cyanobacterium stanieri PCC 7202]
gi|428686542|gb|AFZ46402.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanobacterium
stanieri PCC 7202]
Length = 494
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 110/226 (48%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI +++Q L+ + P+ +G + + + + AI DF+ AI + + ++ RG A
Sbjct: 221 AIDVYNQGLQLEDKNPQLYFLKGVSCWKKGDYQGAIKDFSRAIDLDKNYLLPYQWRGFAY 280
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ A+QD + ++ + S ++R ++ K ++ A++D S C+ ++ + A
Sbjct: 281 TYFQKYDLALQDYEEEIKIDSVSFWGYYKRAFIHAKLGNYLQALDDYSICLTINPKCFYA 340
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G + +Y A E + + + L+ + E + +L YQ L N + + C ++ L
Sbjct: 341 YCNRGFVYFQLKDYHDAIEDYNRVLSLNPSLFEVYYNLGCIYQILGNHSQCISCYKESLK 400
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
I+ R+ K Y +L LGQ KAI L ++P+ I+ Y R
Sbjct: 401 INPRYEKPYFNLAILQADLGQFPKAIALYDKILTLNPNFIQAEYNR 446
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+F+ KDF+ A++ + ++L+ +N Y G++ G+Y+ A + +AI LD+N+L
Sbjct: 212 HFQKKDFDLAIDVYNQGLQLEDKNPQLYFLKGVSCWKKGDYQGAIKDFSRAIDLDKNYLL 271
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+ Y + AL+ ++ + ID Y+ R + LG + +A+ D S L
Sbjct: 272 PYQWRGFAYTYFQKYDLALQDYEEEIKIDSVSFWGYYKRAFIHAKLGNYLQALDDYSICL 331
Query: 613 GIDPSNIECLYL---RASCYHAIGEYREAV 639
I+P +C Y R Y + +Y +A+
Sbjct: 332 TINP---KCFYAYCNRGFVYFQLKDYHDAI 358
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 73 CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV------- 125
CNR F Y QL+ + I D ++ L L+P+L + Y GC + LG + +S
Sbjct: 342 CNRGFVYFQLKDYHDAIEDYNRVLSLNPSLFEVYYNLGCIYQILGNHSQCISCYKESLKI 401
Query: 126 ---WEKGYEHALHQSADLKQF 143
+EK Y + ADL QF
Sbjct: 402 NPRYEKPYFNLAILQADLGQF 422
>gi|355572129|ref|ZP_09043311.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
tarda NOBI-1]
gi|354824845|gb|EHF09084.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanolinea
tarda NOBI-1]
Length = 660
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 1/227 (0%)
Query: 414 YPEALIGRGTARAF-QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
YP+A + R R Q LE ++ F AI N EAW+ RG+A +G EA + L
Sbjct: 24 YPDADLAREGDRLLEQGNLEQSLVLFDRAIAINGENVEAWEGRGKALHLMGRESEAFESL 83
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+++L +P+SA G V A + + LD +A+ +G A S +G+
Sbjct: 84 NRSLALDPSSASRWVALGDVLLAMDQNYDAAQAYDRAIALDINITTAWNGIGTAYSRMGK 143
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
Y +A + L A++ + ++ A +L L +AL Q L +D + A RG
Sbjct: 144 YTEARQFFLAALRTNGSYAPAAKNLGDTLVALQLWGEALRAYDQALAMDPALASAAVARG 203
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LL G++ +A+ LGIDP + L +A A+G EA+
Sbjct: 204 DLLSRFGRNGEALSSYDQALGIDPDSTSVLSKKAQVLAALGRTEEAL 250
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 108/258 (41%), Gaps = 8/258 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + G + A+S + Q + DP P A RG A + E A+ D A
Sbjct: 303 NRGFSYNSLGMFGDAVSAYSQAIAIDPGNPAAYTNRGFALLNLGKGEDALGDLDRATTLQ 362
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW R A LG EA+ D S+A P + G+ + +F A+
Sbjct: 363 PDLATAWSYRALADYRLGRFTEALDDASRATRLNPRDSLAWSTGGMALLQKGEFQKAIPY 422
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L+ + G+AL ++A A + ++LD + AW + + L
Sbjct: 423 FDKALTLNPNASDIWLNKGIALYMAKNNEEALSALDRVLELDPESMTAWQYKVYALRALG 482
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRG----LLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
E+A+ + L D ++ LR ++L+ +G+ + A LS L DPSN E
Sbjct: 483 RGEEAVWITDRQLKTDS-WNTTLLLRKATALVILNRMGEAQLA---LSRILEKDPSNYEA 538
Query: 622 LYLRASCYHAIGEYREAV 639
L R A G+Y A+
Sbjct: 539 LVARGKIQIASGDYLGAI 556
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 7/269 (2%)
Query: 377 KSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRE 430
++I++D ++ G A GKY A F L+ + Y A G T A Q
Sbjct: 119 RAIALDINITTAWNGIGTAYSRMGKYTEARQFFLAALRTNGSYAPAAKNLGDTLVALQLW 178
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E A+ + +A+ +P+ A RG + G + EA+ +AL +P+S +L ++
Sbjct: 179 GE-ALRAYDQALAMDPALASAAVARGDLLSRFGRNGEALSSYDQALGIDPDSTSVLSKKA 237
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
V A+ + + L+ N + + + L+++G + ++ +A AI L+ N
Sbjct: 238 QVLAALGRTEEALSTIDRILVLEPGNATYWVHKSFLLNNLGRFNESLDASGTAISLEPNN 297
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
AW + Y L A+ Q + ID AY RG L LG+ + A+ DL
Sbjct: 298 AVAWNNRGFSYNSLGMFGDAVSAYSQAIAIDPGNPAAYTNRGFALLNLGKGEDALGDLDR 357
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ P RA + +G + EA+
Sbjct: 358 ATTLQPDLATAWSYRALADYRLGRFTEAL 386
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 36/256 (14%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+ A+ +DQ L DP A + RG + F R EA +S + +A+ +P + ++
Sbjct: 178 WGEALRAYDQALAMDPALASAAVARGDLLSRFGRNGEA-LSSYDQALGIDPDSTSVLSKK 236
Query: 456 GQARAALGESVEAIQDLSK----------------------------------ALEFEPN 481
Q AALG + EA+ + + A+ EPN
Sbjct: 237 AQVLAALGRTEEALSTIDRILVLEPGNATYWVHKSFLLNNLGRFNESLDASGTAISLEPN 296
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+A + RG F AV S + +D N +AYT G AL ++G+ + A
Sbjct: 297 NAVAWNNRGFSYNSLGMFGDAVSAYSQAIAIDPGNPAAYTNRGFALLNLGKGEDALGDLD 356
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+A L + AW + L +AL+ + ++ R S A+ G+ L G+
Sbjct: 357 RATTLQPDLATAWSYRALADYRLGRFTEALDDASRATRLNPRDSLAWSTGGMALLQKGEF 416
Query: 602 KKAIKDLSSGLGIDPS 617
+KAI L ++P+
Sbjct: 417 QKAIPYFDKALTLNPN 432
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 7/255 (2%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
TR++ S++ + G+A + +G++ AI FD+ L +P + + +G A +
Sbjct: 393 TRLNPRDSLAWS---TGGMALLQKGEFQKAIPYFDKALTLNPNASDIWLNKGIALYMAKN 449
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E A+S ++ +P + AW+ + A ALG EA+ + L+ + + +L +
Sbjct: 450 NEEALSALDRVLELDPESMTAWQYKVYALRALGRGEEAVWITDRQLKTDSWNTTLLLRKA 509
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH--LKAIQLDR 548
A LS ++ D N A G + G+Y A L+ D
Sbjct: 510 TALVILNRMGEAQLALSRILEKDPSNYEALVARGKIQIASGDYLGAIRTFDVLQKTMPDA 569
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ E+ L Y EKAL ++L D S + RG L G+ + AIK
Sbjct: 570 D--ESLIFLGVAYYRSGQYEKALAVYDKLLKKDPANSLTWSNRGYALVKTGRIQDAIKSF 627
Query: 609 SSGLGIDPSNIECLY 623
L +DP N++ Y
Sbjct: 628 DRALELDPKNMDAQY 642
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 367 KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
+ ++RI + + + ++RG Q+ G Y AI FD + K P E+LI G A
Sbjct: 522 QLALSRILEKDPSNYEALVARGKIQIASGDYLGAIRTFDVLQKTMPDADESLIFLGVAYY 581
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ E A++ + + ++ +P+ W RG A G +AI+ +ALE +P + D
Sbjct: 582 RSGQYEKALAVYDKLLKKDPANSLTWSNRGYALVKTGRIQDAIKSFDRALELDPKNMD 639
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 86/202 (42%)
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ AI + + AW G A + +G+ EA Q AL + A G +
Sbjct: 117 YDRAIALDINITTAWNGIGTAYSRMGKYTEARQFFLAALRTNGSYAPAAKNLGDTLVALQ 176
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+ A+ + +D SA G LS G +A ++ +A+ +D +
Sbjct: 177 LWGEALRAYDQALAMDPALASAAVARGDLLSRFGRNGEALSSYDQALGIDPDSTSVLSKK 236
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
Q L +E+AL + ++L ++ + + + LL+ LG+ +++ + + ++P+
Sbjct: 237 AQVLAALGRTEEALSTIDRILVLEPGNATYWVHKSFLLNNLGRFNESLDASGTAISLEPN 296
Query: 618 NIECLYLRASCYHAIGEYREAV 639
N R Y+++G + +AV
Sbjct: 297 NAVAWNNRGFSYNSLGMFGDAV 318
>gi|411119538|ref|ZP_11391918.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410711401|gb|EKQ68908.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 2384
Score = 83.6 bits (205), Expect = 3e-13, Method: Composition-based stats.
Identities = 68/254 (26%), Positives = 107/254 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S GI +GKY A+ + Q L P PE L G A +LE AI+ + +A+ N
Sbjct: 76 SMGIVLRAQGKYTEAVEHYQQALALKPNQPEVLSNLGNALKELGKLEEAIAAYQQALNLN 135
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ EA G A G+ EA+ +A+ +PN A+ H GIV + + A+
Sbjct: 136 QAYAEAHNNLGIAYKDQGKLDEALACYREAIRLKPNYAEAHHNMGIVLRQQNKLDDAIHY 195
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L AYT LG L G ++A + + + L N+ E + +L Q
Sbjct: 196 FRQAIALKPHYIDAYTSLGSTLQQQGNGEEAIACYQQVVTLKPNYAEGFNNLGLALQHQG 255
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ QQ L + F + G LL + + +AI + P+ E L
Sbjct: 256 KLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQAIAQHPNYPEALNNL 315
Query: 626 ASCYHAIGEYREAV 639
+ G+ EA+
Sbjct: 316 GNALQRQGKLDEAI 329
Score = 78.6 bits (192), Expect = 9e-12, Method: Composition-based stats.
Identities = 68/254 (26%), Positives = 105/254 (41%), Gaps = 6/254 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A ++GK AI+ F Q L P +P G ++ AI+ + +AI +P+
Sbjct: 248 GLALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQAIAQHPN 307
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA G A G+ EAI KALE PN + L G V AAV L
Sbjct: 308 YPEALNNLGNALQRQGKLDEAITHYQKALELRPNFVEALSNLGAVLKDQHKLEAAVSYLE 367
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDL 564
V L + LG A E K+ +EA + A+ L E +L Q +
Sbjct: 368 QAVSLGPSYAEIHNNLGNAYQ---EQKRVDEAIACYRTAVALKPEMAEVHSNLGNMLQYI 424
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+A E ++ + I F+ Y+ G+ GQ ++A S L + P +E +
Sbjct: 425 GEFEEAFEHFRKAIEIQPDFAGVYNNLGIAHRNAGQVQEAFAAYSKALELKPDFVEAHWN 484
Query: 625 RASCYHAIGEYREA 638
A + +G ++
Sbjct: 485 TALNHLLLGNLKQG 498
Score = 74.7 bits (182), Expect = 1e-10, Method: Composition-based stats.
Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 42/296 (14%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+S G+ G+ A A ++ +L+EDP +AL G + E A F +
Sbjct: 8 ISTGLQYQRAGRVAEAEQVYKLLLREDPHSVDALNLLGALVYEDKRFEEAQEYFERVLSL 67
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A EA G A G+ EA++ +AL +PN ++L G + A+
Sbjct: 68 QPGA-EAHNSMGIVLRAQGKYTEAVEHYQQALALKPNQPEVLSNLGNALKELGKLEEAIA 126
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGE-------YKKA-------EEAH---------- 540
+ L++ A+ LG+A G+ Y++A EAH
Sbjct: 127 AYQQALNLNQAYAEAHNNLGIAYKDQGKLDEALACYREAIRLKPNYAEAHHNMGIVLRQQ 186
Query: 541 ----------LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+AI L ++++A+ L Q N E+A+ C QQV+ + +++ ++
Sbjct: 187 NKLDDAIHYFRQAIALKPHYIDAYTSLGSTLQQQGNGEEAIACYQQVVTLKPNYAEGFNN 246
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDP------SNIECLYLRAS-CYHAIGEYREAV 639
GL L G+ ++AI L + P +N+ L L + AI Y++A+
Sbjct: 247 LGLALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQAI 302
Score = 70.1 bits (170), Expect = 3e-09, Method: Composition-based stats.
Identities = 59/251 (23%), Positives = 103/251 (41%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + K AI F Q + P Y +A G+ Q E AI+ + + + P+
Sbjct: 180 GIVLRQQNKLDDAIHYFRQAIALKPHYIDAYTSLGSTLQQQGNGEEAIACYQQVVTLKPN 239
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E + G A G+ EAI +AL +PN + + G + + + A+
Sbjct: 240 YAEGFNNLGLALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQ 299
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ A LG AL G+ +A + KA++L NF+EA +L +D
Sbjct: 300 QAIAQHPNYPEALNNLGNALQRQGKLDEAITHYQKALELRPNFVEALSNLGAVLKDQHKL 359
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E A+ L+Q + + +++ ++ G + +AI + + + P E +
Sbjct: 360 EAAVSYLEQAVSLGPSYAEIHNNLGNAYQEQKRVDEAIACYRTAVALKPEMAEVHSNLGN 419
Query: 628 CYHAIGEYREA 638
IGE+ EA
Sbjct: 420 MLQYIGEFEEA 430
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 4/205 (1%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A +GK AI+ + + L+ P + EAL G Q +LEAA+S +A+ PS
Sbjct: 316 GNALQRQGKLDEAITHYQKALELRPNFVEALSNLGAVLKDQHKLEAAVSYLEQAVSLGPS 375
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E G A EAI A+ +P A++ G + +F A E
Sbjct: 376 YAEIHNNLGNAYQEQKRVDEAIACYRTAVALKPEMAEVHSNLGNMLQYIGEFEEAFEHFR 435
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+++ + Y LG+A + G+ ++A A+ KA++L +F+EA + + L N
Sbjct: 436 KAIEIQPDFAGVYNNLGIAHRNAGQVQEAFAAYSKALELKPDFVEAHWNTALNHLLLGNL 495
Query: 568 EKALEC----LQQVLYIDKRFSKAY 588
++ E Q +I++ S++Y
Sbjct: 496 KQGFEGYEWRFQWSRFIEQNPSRSY 520
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 14/205 (6%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------N 481
R+L+ AI+ + +++N + + + A G+ EA+ KAL +P N
Sbjct: 922 RKLDEAIAYYQNTLKANDNHLDTYNNLAVALHEQGKLDEAMPYYQKALALKPDNPDAHNN 981
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A++L ER + A+ + + AY LGLA + G + A EA+
Sbjct: 982 YANLLRER-------SRLDEAIYHYQQAIAARPDYPDAYNNLGLAYYAKGNFASAAEAYR 1034
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+AI+ +F +A HL ++L N +A QQ + + ++KAY+ G + G
Sbjct: 1035 QAIERKPHFPQALNHLGNALKELGNFAEAARYYQQAIALKPDYAKAYNNWGNIFRDEGDL 1094
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRA 626
+ A++ IDP+ E + +A
Sbjct: 1095 QTAVQYYDQATEIDPNFAEAHWNKA 1119
Score = 54.3 bits (129), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 63/163 (38%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+ + G A ++ QIL++ +AL G + E A ++
Sbjct: 1476 LNTALQLYQSGNLTEAENLLRQILQQQSDDADALHILGVILCQTKRFEEATQQIQRLVEL 1535
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P E WK G A G+ EAI +A+ EPNS D+ + AV
Sbjct: 1536 QPQFAEGWKNLGSALQEQGKFAEAIASYQRAIALEPNSPDVHQNLSTALLELDRPFEAVT 1595
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
V L E + LG AL G ++A ++ +AI L+
Sbjct: 1596 HAERVVALKPEFADGHYNLGYALRRAGRIEEAIASYRQAIALN 1638
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 75/155 (48%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G EA L + L+ + + AD LH G++ + K F A + + V+L + +
Sbjct: 1486 GNLTEAENLLRQILQQQSDDADALHILGVILCQTKRFEEATQQIQRLVELQPQFAEGWKN 1545
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG AL G++ +A ++ +AI L+ N + +L+ +L +A+ ++V+ +
Sbjct: 1546 LGSALQEQGKFAEAIASYQRAIALEPNSPDVHQNLSTALLELDRPFEAVTHAERVVALKP 1605
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
F+ ++ G L G+ ++AI + ++P+
Sbjct: 1606 EFADGHYNLGYALRRAGRIEEAIASYRQAIALNPA 1640
Score = 49.7 bits (117), Expect = 0.005, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 69/166 (41%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
+A +GK A+ + + L P P+A + L+ AI + +AI + P
Sbjct: 949 AVALHEQGKLDEAMPYYQKALALKPDNPDAHNNYANLLRERSRLDEAIYHYQQAIAARPD 1008
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G A A G A + +A+E +P+ L+ G + +F A
Sbjct: 1009 YPDAYNNLGLAYYAKGNFASAAEAYRQAIERKPHFPQALNHLGNALKELGNFAEAARYYQ 1068
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ L + AY G G+ + A + + +A ++D NF EA
Sbjct: 1069 QAIALKPDYAKAYNNWGNIFRDEGDLQTAVQYYDQATEIDPNFAEA 1114
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 57/141 (40%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI + Q + P YP+A G A + +A + +AI+ P +A G A
Sbjct: 995 AIYHYQQAIAARPDYPDAYNNLGLAYYAKGNFASAAEAYRQAIERKPHFPQALNHLGNAL 1054
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG EA + +A+ +P+ A + G + D AV+ ++D A
Sbjct: 1055 KELGNFAEAARYYQQAIALKPDYAKAYNNWGNIFRDEGDLQTAVQYYDQATEIDPNFAEA 1114
Query: 520 YTYLGLALSSIGEYKKAEEAH 540
+ L L G+ ++ E +
Sbjct: 1115 HWNKALTLLLGGDLRRGFEEY 1135
Score = 39.3 bits (90), Expect = 6.2, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 77/188 (40%), Gaps = 5/188 (2%)
Query: 456 GQARAAL-----GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
+ RAA+ G+ EA + L+ P+SAD H G++ + + A+ +
Sbjct: 876 AELRAAIRLHQTGQVEEARRRCEAFLQKCPDSADGWHLLGLIAHHDRKLDEAIAYYQNTL 935
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
K + + Y L +AL G+ +A + KA+ L + +A + ++ + ++A
Sbjct: 936 KANDNHLDTYNNLAVALHEQGKLDEAMPYYQKALALKPDNPDAHNNYANLLRERSRLDEA 995
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
+ QQ + + AY+ GL + G A + + P + L +
Sbjct: 996 IYHYQQAIAARPDYPDAYNNLGLAYYAKGNFASAAEAYRQAIERKPHFPQALNHLGNALK 1055
Query: 631 AIGEYREA 638
+G + EA
Sbjct: 1056 ELGNFAEA 1063
>gi|354565365|ref|ZP_08984540.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353549324|gb|EHC18766.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 373
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 34/243 (13%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ FD++++ DP + EAL RG ++ E A+ DF AI NP+ A R
Sbjct: 74 RYEDALKDFDRVIELDPNFTEALAIRGETYRLMQKYEEALKDFNRAIALNPNFDWALASR 133
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
GQ + EA++D ++A++ N +L RG + + A++D +KL+
Sbjct: 134 GQTYQLMQRYEEALKDFNRAIKINSNLDWVLASRGQTYQLMQCYKQALKDFDRAIKLNPG 193
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N A G + YK+A + AI+ + N+ AW +T
Sbjct: 194 NAWALAGRGETYRLMQRYKQALKDFDCAIEFNPNY--AWALMT----------------- 234
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
RG + L ++ A+ D + + ++P+N CLY+RA Y + +
Sbjct: 235 ---------------RGEVYLMLKRYNAALADFNRAIELEPNNDWCLYVRALAYQTLKQP 279
Query: 636 REA 638
++A
Sbjct: 280 KKA 282
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 11/242 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG +Y A+ F++ +K + L RG + + A+ DF AI+ N
Sbjct: 132 SRGQTYQLMQRYEEALKDFNRAIKINSNLDWVLASRGQTYQLMQCYKQALKDFDRAIKLN 191
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A RG+ + +A++D A+EF PN A L RG V K +NAA+ D
Sbjct: 192 PGNAWALAGRGETYRLMQRYKQALKDFDCAIEFNPNYAWALMTRGEVYLMLKRYNAALAD 251
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L+ N LA ++ + KKA A++ + + +QD
Sbjct: 252 FNRAIELEPNNDWCLYVRALAYQTLKQPKKARSDFAGAVKFAKE------RYKENFQDWH 305
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG-QH-KKAIKDLSSGLGIDPSNIECLY 623
N+ L +D + R L QH ++AI+DL L I P++I+ L
Sbjct: 306 NT---FNLALYYLAVDYAPTAEQLYRYALSQSASLQHIQEAIRDLDDFLTIFPNHIQALS 362
Query: 624 LR 625
LR
Sbjct: 363 LR 364
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 91/206 (44%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ +F ++ NP+ RRGQ L +A++D + +E +PN + L RG
Sbjct: 44 ALKEFDRTLKINPNHISTLARRGQIYQFLLRYEDALKDFDRVIELDPNFTEALAIRGETY 103
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ + A++D + + L+ A G + Y++A + +AI+++ N
Sbjct: 104 RLMQKYEEALKDFNRAIALNPNFDWALASRGQTYQLMQRYEEALKDFNRAIKINSNLDWV 163
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
Q YQ + ++AL+ + + ++ + A RG + ++K+A+KD +
Sbjct: 164 LASRGQTYQLMQCYKQALKDFDRAIKLNPGNAWALAGRGETYRLMQRYKQALKDFDCAIE 223
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
+P+ L R Y + Y A+
Sbjct: 224 FNPNYAWALMTRGEVYLMLKRYNAAL 249
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
+A+++ + L+ PN L RG + + A++D ++LD A G
Sbjct: 43 KALKEFDRTLKINPNHISTLARRGQIYQFLLRYEDALKDFDRVIELDPNFTEALAIRGET 102
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+ +Y++A + +AI L+ NF A Q YQ + E+AL+ + + I+
Sbjct: 103 YRLMQKYEEALKDFNRAIALNPNFDWALASRGQTYQLMQRYEEALKDFNRAIKINSNLDW 162
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG + +K+A+KD + ++P N L R Y + Y++A+
Sbjct: 163 VLASRGQTYQLMQCYKQALKDFDRAIKLNPGNAWALAGRGETYRLMQRYKQAL 215
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%)
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
LDK ++ Y+ + YKKA + + ++++ N + Q YQ L E AL
Sbjct: 20 LDKCSEKIYSSCKAGMLVTNNYKKALKEFDRTLKINPNHISTLARRGQIYQFLLRYEDAL 79
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+ +V+ +D F++A +RG + ++++A+KD + + ++P+ L R Y
Sbjct: 80 KDFDRVIELDPNFTEALAIRGETYRLMQKYEEALKDFNRAIALNPNFDWALASRGQTYQL 139
Query: 632 IGEYREAV 639
+ Y EA+
Sbjct: 140 MQRYEEAL 147
>gi|425442275|ref|ZP_18822529.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9717]
gi|389716789|emb|CCH99016.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9717]
Length = 707
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 347 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 406
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RGQA LG++ EA++ + L P ++ + + + + ++AA + L + +
Sbjct: 407 RGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQ 466
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L +I +Y+ A +A+ +A+ L+ + W L ALE
Sbjct: 467 NDAKTWYKKGWSLQNIEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALESY 526
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + +FS+A++ +G++L L + +A++ + + + + + + H +
Sbjct: 527 SKAGQFNPQFSQAHYSQGIILQKLDRKSEALEAFTQATKANSNYYQAWLNQGALLHQMER 586
Query: 635 YREAV 639
++EA+
Sbjct: 587 FQEAI 591
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 5/248 (2%)
Query: 396 KYASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALNTYEKAIQINPDSAWQAWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQG 440
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A +++G +D+ AV+ + L+
Sbjct: 441 KADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGWSLQNIEDYEGAVKAYDQALALES 500
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
+N + G +L + + A E++ KA Q + F +A H +Q Q L +ALE
Sbjct: 501 DNALIWYQKGNSLYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLDRKSEALE 558
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
Q + + +A+ +G LLH + + ++AI I E + ++ +
Sbjct: 559 AFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRL 618
Query: 633 GEYREAVI 640
G+Y +A+I
Sbjct: 619 GDYSQAII 626
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G + EAI KA A++ G
Sbjct: 556 ALEAFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAW 615
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D++ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 616 YRLGDYSQAIIAYQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSN 671
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 105/256 (41%), Gaps = 34/256 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ F+++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + + + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 465 QQNDAKTWYKKGWSLQNIEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L + +A EA +A + + N+ +AW +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLDRKSEALEAFTQATKANSNYYQAWLNQGALLHQM 584
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + +A+ EKA + QQ + K + +
Sbjct: 585 ERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAIIAYQQAIQRQKDNPETWKS 644
Query: 591 RGLLLHGLGQHKKAIK 606
G LGQ+++AI+
Sbjct: 645 LGNSCFKLGQYERAIQ 660
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 85/200 (42%), Gaps = 10/200 (5%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + K D E T+ +K+
Sbjct: 516 LNKINDALESYSKAGQFNPQFSQAHYSQGIILQKLDRKSEALE--------AFTQATKAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI
Sbjct: 568 SNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAIIA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACVKLDKENK 517
+ + ++ + K+D E +
Sbjct: 688 ELQQSSQNQTP--KVDNEEQ 705
>gi|425456094|ref|ZP_18835805.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9807]
gi|389802896|emb|CCI18115.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9807]
Length = 492
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 142/299 (47%), Gaps = 11/299 (3%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
W +L+ + +++ + +K+ ++ ++ ++ R + ++ KY A+ +++ +
Sbjct: 102 WYLLRASYYSSQQKYDLALDDHNKAIELNPNYAMAYSVRALHYSSQQKYDLALDDYNKAI 161
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ +P Y GRG Q++ E A++DF +AI NP+ +A+ RG + + A
Sbjct: 162 ELNPNYGLYYRGRGLNYLLQQKYELALADFNKAIDINPNNADAYNNRGNLYSYQQKYDLA 221
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ D +KA++ N A RG + + + + A+ D + + ++ + AY G S
Sbjct: 222 LSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDINPNDAGAYASRGNLYS 281
Query: 529 SIGEYKKAEEAHLKAIQLDR-NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ +Y+ A + KAI ++ + A+ + FY + AL L + + ++ FS
Sbjct: 282 DLQKYELALADYNKAIDINSDDVFSAYFYRGIFYHRQQKYDLALADLNKAIELNSNFSHF 341
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH-------AIGEYREAV 639
Y +RG+L +++ A+ D S + +D + + Y R Y A+ +Y +A+
Sbjct: 342 YFVRGILHENKEKYELALADYSKAIELDSNYAQAYYNRGELYRLQKKYDLALADYSKAI 400
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 126/285 (44%), Gaps = 35/285 (12%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + KY A+S F++ + + + +A RG Q++ E A++D+ +AI N
Sbjct: 207 NRGNLYSYQQKYDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDIN 266
Query: 446 PSAGEAWKRRGQ----------ARAALGESVE-------------------------AIQ 470
P+ A+ RG A A ++++ A+
Sbjct: 267 PNDAGAYASRGNLYSDLQKYELALADYNKAIDINSDDVFSAYFYRGIFYHRQQKYDLALA 326
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
DL+KA+E N + RGI++ + + A+ D S ++LD AY G
Sbjct: 327 DLNKAIELNSNFSHFYFVRGILHENKEKYELALADYSKAIELDSNYAQAYYNRGELYRLQ 386
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+Y A + KAI ++ N+ A+ + Y + + AL + + I+ ++ AY+
Sbjct: 387 KKYDLALADYSKAIDINPNYANAYYNRGLLYYNQQKYDLALSDYSKAIDINPNYADAYNN 446
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
RG++ + L ++ A+ D + + I+P+ + Y R Y+ + +Y
Sbjct: 447 RGVVYYNLQKYDLALADYNQAIRINPNYAQAYYNRGLLYYNLQKY 491
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 129/281 (45%), Gaps = 19/281 (6%)
Query: 361 EAKRNKKFCVTRISKS--------KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDP 412
EA+ N + +T I+++ KS + + + + + +EG ++ +Q +K
Sbjct: 44 EARENYEQALTVINQAISLFPNSPKSYIIKWSVLDSLERYDEG-----LAAINQAIK--- 95
Query: 413 MYPEAL--IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+ P AL + R + + Q++ + A+ D +AI+ NP+ A+ R ++ + A+
Sbjct: 96 LAPRALWYLLRASYYSSQQKYDLALDDHNKAIELNPNYAMAYSVRALHYSSQQKYDLALD 155
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D +KA+E PN RG+ + + A+ D + + ++ N AY G S
Sbjct: 156 DYNKAIELNPNYGLYYRGRGLNYLLQQKYELALADFNKAIDINPNNADAYNNRGNLYSYQ 215
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+Y A KAI L+RNF +A+ + Y+ E AL + + I+ + AY
Sbjct: 216 QKYDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDINPNDAGAYAS 275
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYH 630
RG L L +++ A+ D + + I+ ++ Y R YH
Sbjct: 276 RGNLYSDLQKYELALADYNKAIDINSDDVFSAYFYRGIFYH 316
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 336 NKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEG 395
NK+ + + S F +L E +K+ + SK+I +D ++ A N G
Sbjct: 329 NKAIELNSNFSHFYFVRGILHENK------EKYELALADYSKAIELDSNYAQ--AYYNRG 380
Query: 396 -------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
KY A++ + + + +P Y A RG Q++ + A+SD+++AI NP+
Sbjct: 381 ELYRLQKKYDLALADYSKAIDINPNYANAYYNRGLLYYNQQKYDLALSDYSKAIDINPNY 440
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+ RG L + A+ D ++A+ PN A + RG++ + + +
Sbjct: 441 ADAYNNRGVVYYNLQKYDLALADYNQAIRINPNYAQAYYNRGLLYYNLQKY 491
>gi|219848309|ref|YP_002462742.1| hypothetical protein Cagg_1399 [Chloroflexus aggregans DSM 9485]
gi|219542568|gb|ACL24306.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
Length = 450
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 2/245 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y A++ F + ++ P YP AL RG RA +R E A++DF A+ NP
Sbjct: 78 RYEEALTAFSRAIELRPEYPWALGSRGQVWRALRRHHE-ALADFEAALALNPMLAWVHAE 136
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+ AL EAI+ ++AL +P+ L RGI + +D+ AA+ D A + L
Sbjct: 137 RGETLRALRRLHEAIEAFNQALNIDPDYVWALGHRGIAYRELRDYPAAIADFDAAITLQD 196
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y G +++ A +AI+LD + A G ++ L ++E AL
Sbjct: 197 TIAWLYAERGETRRLADDFEGALFDLNRAIELDPQYAWALGSRGATFRALGDTEAALADF 256
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ L +D + Y RGLL L + +A+ D S L ++P+N+ L R
Sbjct: 257 NRALELDPAYEWVYMQRGLLYRNLDRLDEALADFSRVLALNPNNVGALVERGELLRLRRH 316
Query: 635 YREAV 639
Y EA+
Sbjct: 317 YNEAL 321
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 38/242 (15%)
Query: 402 SIFD--QILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
++FD + ++ DP Y AL RG T RA + EAA++DF A++ +P+ + +RG
Sbjct: 218 ALFDLNRAIELDPQYAWALGSRGATFRALG-DTEAALADFNRALELDPAYEWVYMQRGLL 276
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
L EA+ D S+ L PN+ L ERG + + +N A+ D S ++L ++
Sbjct: 277 YRNLDRLDEALADFSRVLALNPNNVGALVERGELLRLRRHYNEALTDFSHAIELQPDH-- 334
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
A+ S G+ +A L ++++ LA+ ALE ++
Sbjct: 335 -----AWAIGSRGQVYRA--------------------LNRYHEALADFNNALEQKPDLV 369
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+I + Y L L Q+ +A++D + L + P++ L R + Y A+ + EA
Sbjct: 370 WILAERGETYRL-------LHQYNEALEDFNRALELQPNDSWVLSRRGATYQALKIFEEA 422
Query: 639 VI 640
I
Sbjct: 423 YI 424
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ RG+ N + A++ F ++L +P AL+ RG +R A++DF+ AI+
Sbjct: 271 MQRGLLYRNLDRLDEALADFSRVLALNPNNVGALVERGELLRLRRHYNEALTDFSHAIEL 330
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RGQ AL EA+ D + ALE +P+ IL ERG +N A+E
Sbjct: 331 QPDHAWAIGSRGQVYRALNRYHEALADFNNALEQKPDLVWILAERGETYRLLHQYNEALE 390
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
D + ++L + + G ++ +++A +AI++D N AW
Sbjct: 391 DFNRALELQPNDSWVLSRRGATYQALKIFEEAYIDLTRAIEIDPN--NAWA 439
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 85/209 (40%), Gaps = 34/209 (16%)
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+Q EAA++DF AI +P A+ +RGQ LG E++ DL +A E EPN A
Sbjct: 7 YQDRREAALADFNRAIAIDPDYAWAYFQRGQVLRELGRMEESLADLRRACELEPNDAAYH 66
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
ERG L + Y++A A +AI+L
Sbjct: 67 AERGET----------------------------------LRLMRRYEEALTAFSRAIEL 92
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ A G Q ++ L +AL + L ++ + + RG L L + +AI+
Sbjct: 93 RPEYPWALGSRGQVWRALRRHHEALADFEAALALNPMLAWVHAERGETLRALRRLHEAIE 152
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ L IDP + L R Y + +Y
Sbjct: 153 AFNQALNIDPDYVWALGHRGIAYRELRDY 181
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 111/276 (40%), Gaps = 36/276 (13%)
Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
+A++ F++ + DP Y A RG +E +++D A + P+ RG+
Sbjct: 13 AALADFNRAIAIDPDYAWAYFQRGQVLRELGRMEESLADLRRACELEPNDAAYHAERGET 72
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+ EA+ S+A+E P L RG V + + A+ D A + L+
Sbjct: 73 LRLMRRYEEALTAFSRAIELRPEYPWALGSRGQVWRALRRHHEALADFEAALALNPMLAW 132
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS----------- 567
+ G L ++ +A EA +A+ +D +++ A GH Y++L +
Sbjct: 133 VHAERGETLRALRRLHEAIEAFNQALNIDPDYVWALGHRGIAYRELRDYPAAIADFDAAI 192
Query: 568 -----------------------EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
E AL L + + +D +++ A RG LG + A
Sbjct: 193 TLQDTIAWLYAERGETRRLADDFEGALFDLNRAIELDPQYAWALGSRGATFRALGDTEAA 252
Query: 605 IKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAV 639
+ D + L +DP+ E +Y+ R Y + EA+
Sbjct: 253 LADFNRALELDPA-YEWVYMQRGLLYRNLDRLDEAL 287
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI F+Q L DP Y AL RG A R+ AAI+DF AI + + RG+ R
Sbjct: 150 AIEAFNQALNIDPDYVWALGHRGIAYRELRDYPAAIADFDAAITLQDTIAWLYAERGETR 209
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ A+ DL++A+E +P A L RG D AA+ D + ++LD +
Sbjct: 210 RLADDFEGALFDLNRAIELDPQYAWALGSRGATFRALGDTEAALADFNRALELDPAYEWV 269
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y GL ++ +A + + L+ N + A + + + +AL +
Sbjct: 270 YMQRGLLYRNLDRLDEALADFSRVLALNPNNVGALVERGELLRLRRHYNEALTDFSHAIE 329
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + A RG + L ++ +A+ D ++ L P + L R Y + +Y EA+
Sbjct: 330 LQPDHAWAIGSRGQVYRALNRYHEALADFNNALEQKPDLVWILAERGETYRLLHQYNEAL 389
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 34/244 (13%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG G +A++ F++ L+ DP Y + RG L+ A++DF+ + N
Sbjct: 238 SRGATFRALGDTEAALADFNRALELDPAYEWVYMQRGLLYRNLDRLDEALADFSRVLALN 297
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A RG+ EA+ D S A+E +P+ A + RG V ++ A+ D
Sbjct: 298 PNNVGALVERGELLRLRRHYNEALTDFSHAIELQPDHAWAIGSRGQVYRALNRYHEALAD 357
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + E K ++ L+ GE + L Q+ + L
Sbjct: 358 FNNAL----EQKPDLVWI---LAERGETYRL--------------------LHQYNEALE 390
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ +ALE ++ R RG L ++A DL+ + IDP+N L R
Sbjct: 391 DFNRALELQPNDSWVLSR-------RGATYQALKIFEEAYIDLTRAIEIDPNNAWALAQR 443
Query: 626 ASCY 629
S +
Sbjct: 444 GSLF 447
>gi|145499952|ref|XP_001435960.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403097|emb|CAK68563.1| unnamed protein product [Paramecium tetraurelia]
Length = 680
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 47/279 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-- 443
SRG+ ++ Y AI F+ ++ +P YPE RG AR EL AI DF +A++
Sbjct: 385 SRGLVYMDMKNYELAIQDFNAAIEMEPTYPETYYNRGLARIEMHELNDAIKDFEQALELN 444
Query: 444 -SNPSA----GEAWKRRGQARAAL---------------------------GESVEAIQD 471
+NP G+A++ + AL E +AI D
Sbjct: 445 SNNPGIYSGLGQAYRLKKNYEKALFYLDKALKESPHNQEFLVQRSNIFIDKKEYPKAIID 504
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY-------LG 524
L+ AL+ +PN A I + RG+ +K ++F ++ DL ENK +Y LG
Sbjct: 505 LTSALDRKPNDAQIYYRRGLAYYKNQEFKKSIADLYKAF----ENKPFQSYVPDIHYHLG 560
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-LTQFYQDLANSEKALECLQQVLYIDKR 583
++ +++ + KA E AI L + + A+ H + + + ++ ALE +V+ +
Sbjct: 561 ISFANLEMFDKAIEPLTNAIDLQK-YEPAYIHERAKCFLLVGENQLALEDFDKVIEMQPH 619
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
S AY R L + KA +D +DP N + +
Sbjct: 620 NSHAYFGRAFAHKALQSYGKAAEDFGRAKDLDPMNPKLI 658
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 116/257 (45%), Gaps = 34/257 (13%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F S+G+A + +Y AI +F++ L P + ++ G L+ A+S FT+ +
Sbjct: 314 FYHSKGLAYQDSEEYEMAIKMFEEALNITPNHMPSIFHLGLMYHKNDNLKEALSLFTQVL 373
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ + RG + AIQD + A+E EP + + RG+ + + N A
Sbjct: 374 NAEGKDRLVYSSRGLVYMDMKNYELAIQDFNAAIEMEPTYPETYYNRGLARIEMHELNDA 433
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
++D ++L+ N Y+ LG +A +L +N+ +A +L + +
Sbjct: 434 IKDFEQALELNSNNPGIYSGLG-----------------QAYRLKKNYEKALFYLDKALK 476
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+ ++++ L + ++IDK+ ++ KAI DL+S L P++ +
Sbjct: 477 ESPHNQEFL-VQRSNIFIDKK----------------EYPKAIIDLTSALDRKPNDAQIY 519
Query: 623 YLRASCYHAIGEYREAV 639
Y R Y+ E+++++
Sbjct: 520 YRRGLAYYKNQEFKKSI 536
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 116/245 (47%), Gaps = 3/245 (1%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
++ AI++ + +P Y + RG A + + A+ DF+ A++ + E + RG
Sbjct: 53 FSEAITLLQNSSQTEPQYAKFYAARGNAYMQTGQYQRALFDFSTAVRFEENNAEHYGARG 112
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
LGE +A+++ KA++ + + R +V + ++ A++D +K K++
Sbjct: 113 NCFLQLGEVNDALKEYDKAIQIKSTDGFLFLNRALVYARLDNYKKAIDDYQQALKYLKDS 172
Query: 517 KS---AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ A+ ++G I Y ++ E KA + ++ A +L Y + E ALE
Sbjct: 173 NAQFKAHFHMGNCYRQIKMYDQSIEHLQKACDIKKDEAPAHNNLGLSYFENQQYELALER 232
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + D+ + Y+ + L L+ LG K ++ + + L ID + LY R + + A+G
Sbjct: 233 FTRAIEQDESKATYYNNKALALYHLGDLKGSLIEFNKALSIDDQDARALYNRGNTHLALG 292
Query: 634 EYREA 638
+ EA
Sbjct: 293 KRTEA 297
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%)
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ E A+ FT AI+ + S + + A LG+ ++ + +KAL + A L+
Sbjct: 224 QQYELALERFTRAIEQDESKATYYNNKALALYHLGDLKGSLIEFNKALSIDDQDARALYN 283
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + A D +KL +N Y GLA EY+ A + +A+ +
Sbjct: 284 RGNTHLALGKRTEAHADYDKAIKLMPKNSKFYHSKGLAYQDSEEYEMAIKMFEEALNITP 343
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N + + HL Y N ++AL QVL + + Y RGL+ + ++ AI+D
Sbjct: 344 NHMPSIFHLGLMYHKNDNLKEALSLFTQVLNAEGKDRLVYSSRGLVYMDMKNYELAIQDF 403
Query: 609 SSGLGIDPSNIECLYLRA 626
++ + ++P+ E Y R
Sbjct: 404 NAAIEMEPTYPETYYNRG 421
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/287 (19%), Positives = 112/287 (39%), Gaps = 34/287 (11%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G++ +Y A+ F + +++D + A +L+ ++ +F +A+ +
Sbjct: 217 GLSYFENQQYELALERFTRAIEQDESKATYYNNKALALYHLGDLKGSLIEFNKALSIDDQ 276
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A RG ALG+ EA D KA++ P ++ H +G+ +++ A++
Sbjct: 277 DARALYNRGNTHLALGKRTEAHADYDKAIKLMPKNSKFYHSKGLAYQDSEEYEMAIKMFE 336
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ + + + +LGL K+A + + + + Y D+ N
Sbjct: 337 EALNITPNHMPSIFHLGLMYHKNDNLKEALSLFTQVLNAEGKDRLVYSSRGLVYMDMKNY 396
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGL---------------------------LLHGLGQ 600
E A++ + ++ + + Y+ RGL + GLGQ
Sbjct: 397 ELAIQDFNAAIEMEPTYPETYYNRGLARIEMHELNDAIKDFEQALELNSNNPGIYSGLGQ 456
Query: 601 -------HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
++KA+ L L P N E L R++ + EY +A+I
Sbjct: 457 AYRLKKNYEKALFYLDKALKESPHNQEFLVQRSNIFIDKKEYPKAII 503
>gi|390439560|ref|ZP_10227951.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis sp. T1-4]
gi|389837049|emb|CCI32075.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis sp. T1-4]
Length = 317
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 117/241 (48%), Gaps = 5/241 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ + + + GI Q+ G Y A+ F+Q L+++ A R + ++ A
Sbjct: 42 ARSVHLSYWMRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTEIYLQDYLHAW 101
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D T ++Q A+ RG A LG+ +A+ D ++ ++ +P + RG+V
Sbjct: 102 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYSQALTDYNQTIQLKPTYYQAYYNRGLVQAA 161
Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K++ A+ D + ++ + + Y GLA ++ + A+ +A++L++N
Sbjct: 162 MKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLAHLALHNFTSAKADFHQALRLNKNN 221
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ +L L E+++ L + + ID ++ AY RGLL H LG ++ A+ DL+
Sbjct: 222 ASAYYNLACTAHQLGEYERSIADLNRAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 281
Query: 611 G 611
G
Sbjct: 282 G 282
>gi|425447075|ref|ZP_18827069.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9443]
gi|389732454|emb|CCI03612.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9443]
Length = 317
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 120/248 (48%), Gaps = 6/248 (2%)
Query: 370 VTRISKS-KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+ R+ K+ KS+ + + L GI Q+ G Y A+ F+Q L+++ A R +
Sbjct: 35 LPRLGKAEKSVRLSYWLRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTEIYL 94
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ A D T ++Q A+ RG A LG+ +A+ D ++ + +P +
Sbjct: 95 QDYLHAWQDCTRSLQQQSDNYLAYFHRGLAFYRLGDYSQALTDYNQTIRLKPTYYQAYYN 154
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKA 543
RG+V K++ A+ D + ++ + + Y GL+ ++ + A+ +A
Sbjct: 155 RGLVQAAMKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLSHLALHNFTSAKADFTQA 214
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
++L++N A+ +L L ++++ L + + ID ++ AY RGLL H LG ++
Sbjct: 215 LRLNKNNASAYYNLACTAHQLGEYDRSIAHLNRAIAIDPFYADAYIRRGLLRHQLGYYQS 274
Query: 604 AIKDLSSG 611
A+ DL+ G
Sbjct: 275 ALADLNQG 282
>gi|186686367|ref|YP_001869563.1| serine/threonin protein kinase [Nostoc punctiforme PCC 73102]
gi|186468819|gb|ACC84620.1| serine/threonine protein kinase with TPR repeats [Nostoc
punctiforme PCC 73102]
Length = 709
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 119/240 (49%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A++ +D+ ++ P Y EA GRG A + + AI+ F +A+Q N + E W +G+A
Sbjct: 383 ALAAYDRAIQIKPDYFEAWSGRGFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAF 442
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
+ L + +AI+ KA+E + ++ + +++G+ + A+ V L + + A
Sbjct: 443 SNLNQYDQAIKAYEKAIELKSDNYEAWYKKGLALQNSNRYEEAIAAYQKVVDLKPDYEQA 502
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ LG AL ++ Y+ A A+ KA+Q ++ +AW +L +A+E QV+
Sbjct: 503 WYNLGNALVNLQHYQDAFNAYDKAVQYKSSYYQAWFSRGNTLLNLRRYPEAIESFNQVIK 562
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +A+ G LH ++++AIK + + + + Y + + + +Y +A+
Sbjct: 563 YNPNSYQAWFNLGWSLHQNQRYEEAIKSYNKAATLKSKDYQLWYNLGNSQYILQKYEDAI 622
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 115/244 (47%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ ++++ + P Y + G+G ++ + A++ + AIQ P EAW R
Sbjct: 345 RYQDALEVYEKAVNIRPDYAQGWNGQGKTLYKLKKSKEALAAYDRAIQIKPDYFEAWSGR 404
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G A+L EAI KAL+ S+++ + +G ++ A++ ++L +
Sbjct: 405 GFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAFSNLNQYDQAIKAYEKAIELKSD 464
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N A+ GLAL + Y++A A+ K + L ++ +AW +L +L + + A
Sbjct: 465 NYEAWYKKGLALQNSNRYEEAIAAYQKVVDLKPDYEQAWYNLGNALVNLQHYQDAFNAYD 524
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + + +A+ RG L L ++ +AI+ + + +P++ + + H Y
Sbjct: 525 KAVQYKSSYYQAWFSRGNTLLNLRRYPEAIESFNQVIKYNPNSYQAWFNLGWSLHQNQRY 584
Query: 636 REAV 639
EA+
Sbjct: 585 EEAI 588
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 78/168 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G+A N +Y AI+ + +++ P Y +A G A + + A + + +A+Q
Sbjct: 472 KGLALQNSNRYEEAIAAYQKVVDLKPDYEQAWYNLGNALVNLQHYQDAFNAYDKAVQYKS 531
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
S +AW RG L EAI+ ++ +++ PNS G + + + A++
Sbjct: 532 SYYQAWFSRGNTLLNLRRYPEAIESFNQVIKYNPNSYQAWFNLGWSLHQNQRYEEAIKSY 591
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ L ++ + LG + + +Y+ A ++ KA++ + E+W
Sbjct: 592 NKAATLKSKDYQLWYNLGNSQYILQKYEDAIASYNKAVRYKPDHSESW 639
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 97/234 (41%), Gaps = 4/234 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQI--LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
++G A N +Y AI +++ LK D EA +G A E AI+ + + +
Sbjct: 437 AKGEAFSNLNQYDQAIKAYEKAIELKSDNY--EAWYKKGLALQNSNRYEEAIAAYQKVVD 494
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P +AW G A L +A KA++++ + RG + + A+
Sbjct: 495 LKPDYEQAWYNLGNALVNLQHYQDAFNAYDKAVQYKSSYYQAWFSRGNTLLNLRRYPEAI 554
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
E + +K + + A+ LG +L Y++A +++ KA L + W +L
Sbjct: 555 ESFNQVIKYNPNSYQAWFNLGWSLHQNQRYEEAIKSYNKAATLKSKDYQLWYNLGNSQYI 614
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
L E A+ + + S++++ RG L L + + AI + P+
Sbjct: 615 LQKYEDAIASYNKAVRYKPDHSESWYSRGNALLNLKRFQDAIASYDRAIKYKPN 668
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A VN Y A + +D+ ++ Y +A RG R AI F + I+ NP+
Sbjct: 507 GNALVNLQHYQDAFNAYDKAVQYKSSYYQAWFSRGNTLLNLRRYPEAIESFNQVIKYNPN 566
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ +AW G + EAI+ +KA + + + G + + + A+ +
Sbjct: 567 SYQAWFNLGWSLHQNQRYEEAIKSYNKAATLKSKDYQLWYNLGNSQYILQKYEDAIASYN 626
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
V+ ++ ++ G AL ++ ++ A ++ +AI+ N+ +A
Sbjct: 627 KAVRYKPDHSESWYSRGNALLNLKRFQDAIASYDRAIKYKPNYQQA 672
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 68/159 (42%)
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N+A L ++G F + + A+E V + + + G L + + K+A A+
Sbjct: 328 NNAIELSKQGNTLFDLQRYQDALEVYEKAVNIRPDYAQGWNGQGKTLYKLKKSKEALAAY 387
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AIQ+ ++ EAW L ++A+ + L ++ S+ ++ +G L Q
Sbjct: 388 DRAIQIKPDYFEAWSGRGFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAFSNLNQ 447
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +AIK + + N E Y + Y EA+
Sbjct: 448 YDQAIKAYEKAIELKSDNYEAWYKKGLALQNSNRYEEAI 486
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/185 (18%), Positives = 85/185 (45%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++G L +A++ KA+ P+ A + +G +K K A+ +++
Sbjct: 335 KQGNTLFDLQRYQDALEVYEKAVNIRPDYAQGWNGQGKTLYKLKKSKEALAAYDRAIQIK 394
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ A++ G L+S+ Y++A + KA+QL+ E W + + +L ++A++
Sbjct: 395 PDYFEAWSGRGFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAFSNLNQYDQAIKA 454
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
++ + + +A++ +GL L ++++AI + + P + Y + +
Sbjct: 455 YEKAIELKSDNYEAWYKKGLALQNSNRYEEAIAAYQKVVDLKPDYEQAWYNLGNALVNLQ 514
Query: 634 EYREA 638
Y++A
Sbjct: 515 HYQDA 519
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 75 RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG----- 129
R F + L+ ++ I DKALQL+ + + KG AFS L + ++A+ +EK
Sbjct: 404 RGFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAFSNLNQYDQAIKAYEKAIELKS 463
Query: 130 --YEHALHQSADLKQFLELEELLTAAKQDRSVTCEYD-----VSNSMSSLTVSESGLNAN 182
YE + L+ EE + A ++ + +Y+ + N++ +L + NA
Sbjct: 464 DNYEAWYKKGLALQNSNRYEEAIAAYQKVVDLKPDYEQAWYNLGNALVNLQHYQDAFNAY 523
Query: 183 DK 184
DK
Sbjct: 524 DK 525
>gi|428203744|ref|YP_007082333.1| hypothetical protein Ple7327_3576 [Pleurocapsa sp. PCC 7327]
gi|427981176|gb|AFY78776.1| tetratricopeptide repeat protein [Pleurocapsa sp. PCC 7327]
Length = 297
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 95/185 (51%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI+DFT AI+ NP +++ R A ALG AI D KA+E PN A R
Sbjct: 76 DFQGAIADFTRAIELNPEDPDSYYNRAYAYHALGNYQPAIDDYGKAIELNPNYAYAYGNR 135
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ K ++ AV D + ++L+ + Y Y G A ++ ++++A E + +AI+L +
Sbjct: 136 CYAFYLMKRYDDAVSDCTKAIELEPKLADFYIYRGDAQDALDKHEEAIEDYTEAIRLKDD 195
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
+ Y L +KAL+ + + +D+ + A++ RG++ LG ++AI D+
Sbjct: 196 SANTYYKRALAYGALEEYQKALDDYTESIRLDESLADAFYQRGIVNSKLGNEEEAIADIE 255
Query: 610 SGLGI 614
+ +
Sbjct: 256 QAVKL 260
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 97/193 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+ ++ G + AI+ F + ++ +P P++ R A + AI D+ +AI+ N
Sbjct: 66 NQGVDKIEAGDFQGAIADFTRAIELNPEDPDSYYNRAYAYHALGNYQPAIDDYGKAIELN 125
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R A + +A+ D +KA+E EP AD RG A+ED
Sbjct: 126 PNYAYAYGNRCYAFYLMKRYDDAVSDCTKAIELEPKLADFYIYRGDAQDALDKHEEAIED 185
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L ++ + Y LA ++ EY+KA + + ++I+LD + +A+ L
Sbjct: 186 YTEAIRLKDDSANTYYKRALAYGALEEYQKALDDYTESIRLDESLADAFYQRGIVNSKLG 245
Query: 566 NSEKALECLQQVL 578
N E+A+ ++Q +
Sbjct: 246 NEEEAIADIEQAV 258
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 79/153 (51%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +G+ + DF A+ D + ++L+ E+ +Y A ++G Y+ A + + KAI+L
Sbjct: 65 YNQGVDKIEAGDFQGAIADFTRAIELNPEDPDSYYNRAYAYHALGNYQPAIDDYGKAIEL 124
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ N+ A+G+ + + + A+ + + ++ + + Y RG L +H++AI+
Sbjct: 125 NPNYAYAYGNRCYAFYLMKRYDDAVSDCTKAIELEPKLADFYIYRGDAQDALDKHEEAIE 184
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + + + + Y RA Y A+ EY++A+
Sbjct: 185 DYTEAIRLKDDSANTYYKRALAYGALEEYQKAL 217
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+S + ++ +P + I RG A+ + E AI D+TEAI+ + + +R
Sbjct: 144 RYDDAVSDCTKAIELEPKLADFYIYRGDAQDALDKHEEAIEDYTEAIRLKDDSANTYYKR 203
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DK 514
A AL E +A+ D ++++ + + AD ++RGIVN K + A+ D+ VKL ++
Sbjct: 204 ALAYGALEEYQKALDDYTESIRLDESLADAFYQRGIVNSKLGNEEEAIADIEQAVKLFNE 263
Query: 515 ENKS 518
+NK
Sbjct: 264 QNKP 267
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 78/188 (41%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W +G + G+ AI D ++A+E P D + R ++ A++D ++
Sbjct: 64 WYNQGVDKIEAGDFQGAIADFTRAIELNPEDPDSYYNRAYAYHALGNYQPAIDDYGKAIE 123
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
L+ AY A + Y A KAI+L+ + + + L E+A+
Sbjct: 124 LNPNYAYAYGNRCYAFYLMKRYDDAVSDCTKAIELEPKLADFYIYRGDAQDALDKHEEAI 183
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
E + + + + Y+ R L L +++KA+ D + + +D S + Y R
Sbjct: 184 EDYTEAIRLKDDSANTYYKRALAYGALEEYQKALDDYTESIRLDESLADAFYQRGIVNSK 243
Query: 632 IGEYREAV 639
+G EA+
Sbjct: 244 LGNEEEAI 251
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++ KAI L+ A +Y NR + + ++ + + DC KA++L+P L YI
Sbjct: 114 AIDDYGKAIE-LNPNYAYAY-----GNRCYAFYLMKRYDDAVSDCTKAIELEPKLADFYI 167
Query: 108 LKGCAFSALGRKEEALSVW 126
+G A AL + EEA+ +
Sbjct: 168 YRGDAQDALDKHEEAIEDY 186
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++ ++++AIR+ D Y+ RA Y LE ++ + D ++++LD +L A+
Sbjct: 182 AIEDYTEAIRLKDDSANTYYK------RALAYGALEEYQKALDDYTESIRLDESLADAFY 235
Query: 108 LKGCAFSALGRKEEALSVWEKG 129
+G S LG +EEA++ E+
Sbjct: 236 QRGIVNSKLGNEEEAIADIEQA 257
>gi|124023735|ref|YP_001018042.1| hypothetical protein P9303_20371 [Prochlorococcus marinus str. MIT
9303]
gi|123964021|gb|ABM78777.1| Hypothetical protein P9303_20371 [Prochlorococcus marinus str. MIT
9303]
Length = 233
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 85/155 (54%), Gaps = 2/155 (1%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
T+ + ++S +V F +RG A+ Y AI+ + + + +P Y +A RG A+ +
Sbjct: 38 TQTAVAQSAAVFF--NRGYAKDELKDYQGAIADYTKAIAINPQYADAYNNRGIAKRKSGD 95
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ AI+D+ +AI+ NP EA+ RG A+ L + AI D +KA+ +P D + RG
Sbjct: 96 YQGAIADYNKAIEINPQDAEAYYNRGYAKDELKDYQGAIADYTKAIAIDPQDGDAYNNRG 155
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
I K D+ A+ D S ++++ ++ +AY+ G+
Sbjct: 156 IAKRKSGDYQGAIADYSKIIEINPQDAAAYSNRGI 190
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
RG A+ ++ + AI+D+T+AI NP +A+ RG A+ G+ AI D +KA+E
Sbjct: 49 FFNRGYAKDELKDYQGAIADYTKAIAINPQYADAYNNRGIAKRKSGDYQGAIADYNKAIE 108
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P A+ + RG + KD+ A+ D + + +D ++ AY G+A G+Y+ A
Sbjct: 109 INPQDAEAYYNRGYAKDELKDYQGAIADYTKAIAIDPQDGDAYNNRGIAKRKSGDYQGAI 168
Query: 538 EAHLKAIQLD 547
+ K I+++
Sbjct: 169 ADYSKIIEIN 178
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A+ L + AI D +KA+ P AD + RGI K D+ A+ D + ++++
Sbjct: 52 RGYAKDELKDYQGAIADYTKAIAINPQYADAYNNRGIAKRKSGDYQGAIADYNKAIEINP 111
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ AY G A + +Y+ A + KAI +D +A+ + + + + A+
Sbjct: 112 QDAEAYYNRGYAKDELKDYQGAIADYTKAIAIDPQDGDAYNNRGIAKRKSGDYQGAIADY 171
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLG 599
+++ I+ + + AY RG + G+G
Sbjct: 172 SKIIEINPQDAAAYSNRG-ITKGIG 195
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
SA + RG + KD+ A+ D + + ++ + AY G+A G+Y+ A +
Sbjct: 45 SAAVFFNRGYAKDELKDYQGAIADYTKAIAINPQYADAYNNRGIAKRKSGDYQGAIADYN 104
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+++ EA+ + +L + + A+ + + ID + AY+ RG+ G +
Sbjct: 105 KAIEINPQDAEAYYNRGYAKDELKDYQGAIADYTKAIAIDPQDGDAYNNRGIAKRKSGDY 164
Query: 602 KKAIKDLSSGLGIDP 616
+ AI D S + I+P
Sbjct: 165 QGAIADYSKIIEINP 179
>gi|427738985|ref|YP_007058529.1| putative low-complexity protein [Rivularia sp. PCC 7116]
gi|427374026|gb|AFY57982.1| putative low-complexity protein [Rivularia sp. PCC 7116]
Length = 540
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 9/232 (3%)
Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
S++I +D R + RG+A+ Y A+ +++ ++ +P Y EA R Q +
Sbjct: 277 SRAIELDSRSAAAYTYRGLAKSKLQNYQGALDDYERAIEINPSYAEAYNNRAYLYIQQEK 336
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ A+ DF AI NP A+ + + +A+Q+ ++A+ F A + RG
Sbjct: 337 YQLALQDFDRAISINPQYASAYNGKASIYVEQKDYSKAVQNATEAIRFNSRYARAYNNRG 396
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + K++ AA +D +K + +AY G A +IG YK A + KAI+++R
Sbjct: 397 LGQYGLKNYQAAAKDFRNAIKFSRRWATAYYNSGRARYAIGLYKDATKHFDKAIKINREH 456
Query: 551 LEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
++A+ + L +F D E A++ +V+ + ++ AY ++G L L +
Sbjct: 457 VDAYYYRSLARF--DRKKYEDAIKDSNRVIARNPSYAAAYEIKGKSLLALNK 506
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 102/221 (46%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y SA++ + + ++ D A RG A++ + + A+ D+ AI+ NPS EA+ R
Sbjct: 269 YQSAVTYYSRAIELDSRSAAAYTYRGLAKSKLQNYQGALDDYERAIEINPSYAEAYNNRA 328
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ A+QD +A+ P A + + + + KD++ AV++ + ++ +
Sbjct: 329 YLYIQQEKYQLALQDFDRAISINPQYASAYNGKASIYVEQKDYSKAVQNATEAIRFNSRY 388
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
AY GL + Y+ A + AI+ R + A+ + + + + A + +
Sbjct: 389 ARAYNNRGLGQYGLKNYQAAAKDFRNAIKFSRRWATAYYNSGRARYAIGLYKDATKHFDK 448
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ I++ AY+ R L +++ AIKD + + +PS
Sbjct: 449 AIKINREHVDAYYYRSLARFDRKKYEDAIKDSNRVIARNPS 489
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G R + + ++A++ ++ AI+ + + A+ RG A++ L A+ D +A+E P+
Sbjct: 260 GHNRYHRDDYQSAVTYYSRAIELDSRSAAAYTYRGLAKSKLQNYQGALDDYERAIEINPS 319
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A+ + R + + + + A++D + ++ + SAY +Y KA +
Sbjct: 320 YAEAYNNRAYLYIQQEKYQLALQDFDRAISINPQYASAYNGKASIYVEQKDYSKAVQNAT 379
Query: 542 KAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+AI+ + + A+ + L Q+ L N + A + + + +R++ AY+ G + +G
Sbjct: 380 EAIRFNSRYARAYNNRGLGQY--GLKNYQAAAKDFRNAIKFSRRWATAYYNSGRARYAIG 437
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+K A K + I+ +++ Y R+ +Y +A+
Sbjct: 438 LYKDATKHFDKAIKINREHVDAYYYRSLARFDRKKYEDAI 477
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 74/155 (47%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
V + Y+ A+ + ++ + Y A RG + + +AA DF AI+ + A
Sbjct: 366 VEQKDYSKAVQNATEAIRFNSRYARAYNNRGLGQYGLKNYQAAAKDFRNAIKFSRRWATA 425
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ G+AR A+G +A + KA++ D + R + F K + A++D + +
Sbjct: 426 YYNSGRARYAIGLYKDATKHFDKAIKINREHVDAYYYRSLARFDRKKYEDAIKDSNRVIA 485
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +AY G +L ++ + +A++A KA+++
Sbjct: 486 RNPSYAAAYEIKGKSLLALNKPVEAKQAFDKAVKI 520
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A+ G Y A FD+ +K + + +A R AR +++ E AI D I NPS
Sbjct: 430 GRARYAIGLYKDATKHFDKAIKINREHVDAYYYRSLARFDRKKYEDAIKDSNRVIARNPS 489
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
A++ +G++ AL + VEA Q KA++ D
Sbjct: 490 YAAAYEIKGKSLLALNKPVEAKQAFDKAVKIYAQKQD 526
>gi|393767279|ref|ZP_10355828.1| tpr repeat-containing protein [Methylobacterium sp. GXF4]
gi|392727180|gb|EIZ84496.1| tpr repeat-containing protein [Methylobacterium sp. GXF4]
Length = 290
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 4/220 (1%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ ++++ +P A RG A A + AI+DFT+AI +P++G A+ R A
Sbjct: 54 IASLTEVIQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAISIDPNSGSAYNNRALAER 113
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+G A+QD SKA+ +PN R V + + A+ DL+ ++L E+ AY
Sbjct: 114 QVGRDAAALQDFSKAISIDPNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESAEAY 173
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE--KALECLQQVL 578
GL G+ +A AI DRN + + + +A ++ KA+E L
Sbjct: 174 HARGLVRQKQGQETQAIADFDAAI--DRNPFVSAPYAARGQSLIATNQYPKAIEDYNAAL 231
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++ + + ++ RGL GQ K+A+++ IDP+N
Sbjct: 232 NVNNKDATSWAYRGLAYEKSGQRKEALENYQRAAVIDPNN 271
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RG A G++ AI+ F + + DP A R A R R+ AA+ DF++AI
Sbjct: 73 TRGAAYARAGQFNDAIADFTKAISIDPNSGSAYNNRALAERQVGRD-AAALQDFSKAISI 131
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ G A+ R A G +A+ DL+ A+ P SA+ H RG+V K A+
Sbjct: 132 DPNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESAEAYHARGLVRQKQGQETQAIA 191
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D A + + + Y G +L + +Y KA E + A+ ++ +W + Y+
Sbjct: 192 DFDAAIDRNPFVSAPYAARGQSLIATNQYPKAIEDYNAALNVNNKDATSWAYRGLAYEKS 251
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
++ALE Q+ ID + A G + G+G
Sbjct: 252 GQRKEALENYQRAAVIDPNNAVARAGLGRVQGGVG 286
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+ TE IQ NP+ A+ RG A A G+ +AI D +KA+ +PNS + R +
Sbjct: 54 IASLTEVIQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAISIDPNSGSAYNNRALAER 113
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ AA++D S + +D AY + G +A AI+L EA+
Sbjct: 114 QVGRDAAALQDFSKAISIDPNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESAEAY 173
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
Q +A+ + + S Y RG L Q+ KAI+D ++ L +
Sbjct: 174 HARGLVRQKQGQETQAIADFDAAIDRNPFVSAPYAARGQSLIATNQYPKAIEDYNAALNV 233
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
+ + R Y G+ +EA+
Sbjct: 234 NNKDATSWAYRGLAYEKSGQRKEAL 258
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 21/223 (9%)
Query: 322 NTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK------ 375
NT +Y+++ ++ +D T++ S + S A N+ ++ +
Sbjct: 72 NTRGAAYARAGQFNDAIADFTKAIS--------IDPNSGSAYNNRALAERQVGRDAAALQ 123
Query: 376 --SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
SK+IS+D + R + +G A+S + ++ P EA RG R Q
Sbjct: 124 DFSKAISIDPNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESAEAYHARGLVRQKQ 183
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ AI+DF AI NP + RGQ+ A + +AI+D + AL A
Sbjct: 184 GQETQAIADFDAAIDRNPFVSAPYAARGQSLIATNQYPKAIEDYNAALNVNNKDATSWAY 243
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
RG+ K A+E+ +D N A LG +G
Sbjct: 244 RGLAYEKSGQRKEALENYQRAAVIDPNNAVARAGLGRVQGGVG 286
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 60/140 (42%)
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
N + L+ ++ + + +AY G A + G++ A KAI +D N A+ +
Sbjct: 51 NVNIASLTEVIQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAISIDPNSGSAYNNRAL 110
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ + AL+ + + ID + AY R + G +A+ DL+ + + P +
Sbjct: 111 AERQVGRDAAALQDFSKAISIDPNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESA 170
Query: 620 ECLYLRASCYHAIGEYREAV 639
E + R G+ +A+
Sbjct: 171 EAYHARGLVRQKQGQETQAI 190
>gi|168179691|ref|ZP_02614355.1| tetratricopeptide repeat family protein [Clostridium botulinum NCTC
2916]
gi|182669311|gb|EDT81287.1| tetratricopeptide repeat family protein [Clostridium botulinum NCTC
2916]
Length = 251
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 34/213 (15%)
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ +++ I +T +I+ PS +A+ R + LGE ++I D +K LE P D
Sbjct: 34 YSSDIKDKIKFYTISIKLKPSFIDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCY 93
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ R IV + K+++ +++DL V +DK K+ Y G+ I +YK+A KAI
Sbjct: 94 NNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIH- 152
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E W R S+AY R + L ++ +IK
Sbjct: 153 -----EDW----------------------------RDSEAYENRAFTYYNLKKYSSSIK 179
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D ++ L + P N R + Y+ I Y A+
Sbjct: 180 DYTNALKLTPENKNIYLNRGTIYYKIKNYENAI 212
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 59/135 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I Y ++ D ++ D Y RG + + A +FT+AI +
Sbjct: 95 NRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHED 154
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
EA++ R L + +I+D + AL+ P + +I RG + +K K++ A+ D
Sbjct: 155 WRDSEAYENRAFTYYNLKKYSSSIKDYTNALKLTPENKNIYLNRGTIYYKIKNYENAISD 214
Query: 506 LSACVKLDKENKSAY 520
+ +++ S Y
Sbjct: 215 YMKALNCKEKDPSFY 229
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 75/179 (41%), Gaps = 1/179 (0%)
Query: 367 KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
KF I K K +D +R G+Y +I+ +++IL+ +P + R
Sbjct: 43 KFYTISI-KLKPSFIDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCYNNRAIVYY 101
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ + ++ D + + + RG + + A + +KA+ + ++
Sbjct: 102 LIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHEDWRDSEAY 161
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
R + K ++++++D + +KL ENK+ Y G I Y+ A ++KA+
Sbjct: 162 ENRAFTYYNLKKYSSSIKDYTNALKLTPENKNIYLNRGTIYYKIKNYENAISDYMKALN 220
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/178 (17%), Positives = 71/178 (39%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I + +K P + +A R E +I+D+ + ++ NP + + R
Sbjct: 42 IKFYTISIKLKPSFIDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCYNNRAIVYY 101
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ +++QDL + + + +I RG+V +D+ A + + + D + AY
Sbjct: 102 LIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHEDWRDSEAY 161
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
++ +Y + + + A++L + + Y + N E A+ + L
Sbjct: 162 ENRAFTYYNLKKYSSSIKDYTNALKLTPENKNIYLNRGTIYYKIKNYENAISDYMKAL 219
>gi|260818525|ref|XP_002604433.1| hypothetical protein BRAFLDRAFT_79267 [Branchiostoma floridae]
gi|229289760|gb|EEN60444.1| hypothetical protein BRAFLDRAFT_79267 [Branchiostoma floridae]
Length = 868
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 132/314 (42%), Gaps = 46/314 (14%)
Query: 331 SSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIA 390
S + N ++ T R + S ML+E + A K V +S S +D ++ GI
Sbjct: 102 SLLGKNGATQDTCQRDQESPAASMLREYA--AVLLDKGLVPLVSSGDS-QLDAEIAFGIV 158
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-----FQRELEAAISDFTEAIQSN 445
N G +I F LK+ P A GRG+A A ++ E A++DFT+AI+ +
Sbjct: 159 LANTGSPDESIQHFSAFLKDHPDVIAAYHGRGSAYARKGLQYKINAELALADFTKAIELD 218
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
E+++RR + + +G +AI DL A+ EP +A RG +NF ++ E+
Sbjct: 219 RKLAESYERRAEILSPIGRGRDAIVDLDIAINLEP-TARRFFRRGTLNFLREEAAKIFEN 277
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +K + E A LG +G+Y+
Sbjct: 278 V---IKANPEYVEAIRNLGQVYRELGDYE------------------------------- 303
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
KA+E L +D + + Y RG L + G+ A+++ L ++P N C Y+
Sbjct: 304 ---KAMEQFNTALILDDKHVQGYQFRGSLYYHSGRPFDALRNFKKCLALEPHNEPCQYMT 360
Query: 626 ASCYHAIGEYREAV 639
AIG + +
Sbjct: 361 GLSNSAIGRFYHGI 374
>gi|449106387|ref|ZP_21743053.1| hypothetical protein HMPREF9729_01318 [Treponema denticola ASLM]
gi|451968096|ref|ZP_21921325.1| hypothetical protein HMPREF9728_00496 [Treponema denticola US-Trep]
gi|448964900|gb|EMB45566.1| hypothetical protein HMPREF9729_01318 [Treponema denticola ASLM]
gi|451703053|gb|EMD57435.1| hypothetical protein HMPREF9728_00496 [Treponema denticola US-Trep]
Length = 337
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ + +K +P Y EA + RG E E A++DF + I+ P +A+ +G
Sbjct: 59 AIAYYTNSIKANPAYAEAYLNRGEMYYDVNEHEKALADFDKVIELRPKEDKAYYFKGLLL 118
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G +AI++L+ A+ + + R + ++ A ED++ +KL++++
Sbjct: 119 NDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKAFEDINTAIKLNQKSAKL 178
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G A A +LD N + + L Y + +A E + +++
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIATKLDPNDIWPYNGLLFIYIETKKHNEAFEIVNKMIK 238
Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ + Y +RGLL GQ+K+A++D ++G+ + P N +R Y + EY++A
Sbjct: 239 MKPSWIGILYGIRGLLFSFRGQYKEAVEDCNTGIRMYPQNASLYNIRGKIYFDLKEYKKA 298
Query: 639 V 639
+
Sbjct: 299 I 299
>gi|428226949|ref|YP_007111046.1| hypothetical protein GEI7407_3527 [Geitlerinema sp. PCC 7407]
gi|427986850|gb|AFY67994.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
PCC 7407]
Length = 575
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 6/240 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+SRG A Y A++ +++ + + Y A RG +Q LE AI+++ AI++
Sbjct: 308 VSRGNALRAMRDYPGALADYERAIAINSNYAPAYNNRGLVYRYQNNLEGAIAEYGRAIEA 367
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+PS EA+ R A AA + I D S+A+ A + R + F+ D+ A+E
Sbjct: 368 DPSYAEAYNNRAYAYAAQRNYEQVIADASQAIRINGKYAAAYNVRSLARFEKGDYQGALE 427
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQ 562
D + A+ G A +G+ ++A + +AI+L+ ++A+ + L +F
Sbjct: 428 DGHRAIDSSDGYADAFFNRGRARLRLGDPREATKDLDRAIELNEGMVDAYYYRGLARF-- 485
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI--DPSNIE 620
D E A++ +VL D ++ AYH RGL L + +AI D + + SNIE
Sbjct: 486 DREKYEDAVKDYDRVLSRDPSYAAAYHHRGLAYQQLKKMPQAIADWQQAIALYERQSNIE 545
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 111/245 (45%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G AI+ +++ L +P ++ RG A R+ A++D+ AI N + A+
Sbjct: 284 GDQRGAIAFYERALSLEPNNVAVIVSRGNALRAMRDYPGALADYERAIAINSNYAPAYNN 343
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG AI + +A+E +P+ A+ + R +++ + D S ++++
Sbjct: 344 RGLVYRYQNNLEGAIAEYGRAIEADPSYAEAYNNRAYAYAAQRNYEQVIADASQAIRING 403
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ +AY LA G+Y+ A E +AI + +A+ + + L + +A + L
Sbjct: 404 KYAAAYNVRSLARFEKGDYQGALEDGHRAIDSSDGYADAFFNRGRARLRLGDPREATKDL 463
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + +++ AY+ RGL +++ A+KD L DPS + R Y + +
Sbjct: 464 DRAIELNEGMVDAYYYRGLARFDREKYEDAVKDYDRVLSRDPSYAAAYHHRGLAYQQLKK 523
Query: 635 YREAV 639
+A+
Sbjct: 524 MPQAI 528
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 14/209 (6%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+A SDF+ GE+ RRG R A I +AL EPN+ ++ RG
Sbjct: 266 FQAEASDFSRW-------GESLFRRGDQRGA-------IAFYERALSLEPNNVAVIVSRG 311
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+D+ A+ D + ++ AY GL + A + +AI+ D ++
Sbjct: 312 NALRAMRDYPGALADYERAIAINSNYAPAYNNRGLVYRYQNNLEGAIAEYGRAIEADPSY 371
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
EA+ + Y N E+ + Q + I+ +++ AY++R L G ++ A++D
Sbjct: 372 AEAYNNRAYAYAAQRNYEQVIADASQAIRINGKYAAAYNVRSLARFEKGDYQGALEDGHR 431
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + + R +G+ REA
Sbjct: 432 AIDSSDGYADAFFNRGRARLRLGDPREAT 460
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD RG+A+ + KY A+ +D++L DP Y A RG A +++ AI+D+ +
Sbjct: 474 VDAYYYRGLARFDREKYEDAVKDYDRVLSRDPSYAAAYHHRGLAYQQLKKMPQAIADWQQ 533
Query: 441 AI 442
AI
Sbjct: 534 AI 535
>gi|71422459|ref|XP_812141.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70876885|gb|EAN90290.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 703
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 21/266 (7%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G Y AI++FD+ + D + RG ++ + A+ D+T A+ +P +A+
Sbjct: 348 GHYKEAIAMFDKAIALDGNNADFYHNRGFSQRKLGKYREAVKDYTMALSLDPQHFKAYYN 407
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R LGE AI D +KA+ + ++ + H RG K + A+ D + ++LD
Sbjct: 408 RAFCYDKLGEGANAIADYTKAIAIQDDNPNAYHNRGAAMEKAGRLDDAIADYTRAIQLDD 467
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
N Y G+A G+ A + +AI L N + + +Q++ +A+
Sbjct: 468 GNPFTYNARGIAYDRRGKSDAALQDLTQAIALSPNNPIFYQNRAFVFQNMERFPEAVRDY 527
Query: 575 QQVLYI---DKRFS------------------KAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
L + +KRF+ K Y RG G ++ AI D S+ +
Sbjct: 528 NISLALLDEEKRFANGATSEGKATQELNLLILKQYFNRGFCYAREGHYEAAICDFSTVMA 587
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
+P N+ LY R C+ +G Y+ AV
Sbjct: 588 TNPDNLVALYNRGICHDKVGNYKLAV 613
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 113/289 (39%), Gaps = 73/289 (25%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQI 407
+A N+ FC ++ + + D+ + RG A G+ AI+ + +
Sbjct: 403 KAYYNRAFCYDKLGEGANAIADYTKAIAIQDDNPNAYHNRGAAMEKAGRLDDAIADYTRA 462
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP--------------------- 446
++ D P RG A + + +AA+ D T+AI +P
Sbjct: 463 IQLDDGNPFTYNARGIAYDRRGKSDAALQDLTQAIALSPNNPIFYQNRAFVFQNMERFPE 522
Query: 447 -----------------------SAGEA-----------WKRRGQARAALGESVEAIQDL 472
S G+A + RG A G AI D
Sbjct: 523 AVRDYNISLALLDEEKRFANGATSEGKATQELNLLILKQYFNRGFCYAREGHYEAAICDF 582
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
S + P++ L+ RGI + K ++ AVED S ++LD EN A+ G AL S+GE
Sbjct: 583 STVMATNPDNLVALYNRGICHDKVGNYKLAVEDFSHLIELDAENAEAHFSRGTALESLGE 642
Query: 533 YKKAEEAHLKAIQL--DRNFLEAWGHLTQF---YQDLANSEKALECLQQ 576
Y A + + A +L DR+ L G L +F + + S++ L L++
Sbjct: 643 YAMALDDYAVAFKLDVDRSDLVDEGDLAKFKSEHHAMVASQRVLRLLKE 691
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
A+ LRG+ L KAI D ++ L IDPS+ Y RA+C++ G Y A++
Sbjct: 88 AFFLRGVCHVKLSWIDKAIADFTAALDIDPSHSRSTYERAACHNRKGNYTAAIL 141
>gi|126658742|ref|ZP_01729887.1| O-linked GlcNAc transferase [Cyanothece sp. CCY0110]
gi|126620004|gb|EAZ90728.1| O-linked GlcNAc transferase [Cyanothece sp. CCY0110]
Length = 277
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ Y A+ IF+ +L+ P + E +I + + NP
Sbjct: 33 RGVTLFESESYKEALEIFNTLLETYPNEERIWFSKALTLYELENYEESILAYDALLNINP 92
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
EAW RG A + L EAI +KALE PN L + ++ AV
Sbjct: 93 IHEEAWNNRGYALSLLRRYREAILSYNKALEINPNCDKALFNMALAYHHLSNYQKAVNCY 152
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S V++ + +A+ G L + Y +A ++ KAI+L N E + + L
Sbjct: 153 SRYVEMIPDVGAAWNNRGYDLLRLKRYHEAILSYNKAIELIPNSHEPFLNKALALHFLGK 212
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
E+AL + L I +++A++ RG+ LH L +HK+A+ + L ++P N
Sbjct: 213 HEEALLFCDKGLAICPNYAQAWYNRGIFLHHLNRHKEAVFSYNKALALEPEN 264
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 91/174 (52%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EA++ + LE PN I + + ++ +++ ++ A + ++ ++ A+ G A
Sbjct: 45 EALEIFNTLLETYPNEERIWFSKALTLYELENYEESILAYDALLNINPIHEEAWNNRGYA 104
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
LS + Y++A ++ KA++++ N +A ++ Y L+N +KA+ C + + +
Sbjct: 105 LSLLRRYREAILSYNKALEINPNCDKALFNMALAYHHLSNYQKAVNCYSRYVEMIPDVGA 164
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
A++ RG L L ++ +AI + + + P++ E +A H +G++ EA++
Sbjct: 165 AWNNRGYDLLRLKRYHEAILSYNKAIELIPNSHEPFLNKALALHFLGKHEEALL 218
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 56/135 (41%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +A + Y A++ + + ++ P A RG + AI + +AI+
Sbjct: 133 FNMALAYHHLSNYQKAVNCYSRYVEMIPDVGAAWNNRGYDLLRLKRYHEAILSYNKAIEL 192
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P++ E + + A LG+ EA+ K L PN A + RGI AV
Sbjct: 193 IPNSHEPFLNKALALHFLGKHEEALLFCDKGLAICPNYAQAWYNRGIFLHHLNRHKEAVF 252
Query: 505 DLSACVKLDKENKSA 519
+ + L+ EN+ A
Sbjct: 253 SYNKALALEPENEDA 267
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Query: 506 LSACVKLDKENKSAYTYL---GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
L C LD + ++Y L G+ L YK+A E ++ N W
Sbjct: 13 LEPCKVLDDKEDTSYLALYHRGVTLFESESYKEALEIFNTLLETYPNEERIWFSKALTLY 72
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+L N E+++ +L I+ +A++ RG L L ++++AI + L I+P+ + L
Sbjct: 73 ELENYEESILAYDALLNINPIHEEAWNNRGYALSLLRRYREAILSYNKALEINPNCDKAL 132
Query: 623 YLRASCYHAIGEYREAV 639
+ A YH + Y++AV
Sbjct: 133 FNMALAYHHLSNYQKAV 149
>gi|449117445|ref|ZP_21753862.1| hypothetical protein HMPREF9726_01847 [Treponema denticola H-22]
gi|448950646|gb|EMB31467.1| hypothetical protein HMPREF9726_01847 [Treponema denticola H-22]
Length = 337
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ + +K +P Y EA + RG E E A++DF + I+ P +A+ +G
Sbjct: 59 AIAYYTNSIKANPAYAEAYLNRGEMYYDVNEHEKALADFDKVIELRPKEDKAYYFKGLLL 118
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G +AI++L+ A+ + + R + ++ A ED++ +KL++++
Sbjct: 119 NDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKAFEDINTAIKLNQKSAKL 178
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y G A A +LD N + + L Y + +A E + +++
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIATKLDPNDIWPYNGLLFIYIETKKHNEAFEIVNKMIK 238
Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ + Y +RGLL GQ+K+A++D ++G+ + P N +R Y + EY++A
Sbjct: 239 MKPSWIGILYGIRGLLFSFRGQYKEAVEDCNTGIRMYPQNASLYNIRGKIYFDLKEYKKA 298
Query: 639 V 639
+
Sbjct: 299 I 299
>gi|407416657|gb|EKF37752.1| hypothetical protein MOQ_002047 [Trypanosoma cruzi marinkellei]
Length = 798
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 5/275 (1%)
Query: 370 VTRISKSKSIS----VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V I+ S ++S + RG+A +G Y AI + L+ DP +AL RG
Sbjct: 280 VPTITSSSALSGNEEAELHQQRGLAYRKKGDYLRAIDEYSAALRIDPKNFKALFNRGFCS 339
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSAD 484
+ AAI D+ A++ P + G + G EAI KA+ + N+AD
Sbjct: 340 DKVEDYNAAIRDYEAAMKLEPGYAYTYYNLGISYDRWGGHYKEAIAMFDKAIALDGNNAD 399
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
H RG K ++ AV+D + + LD ++ AY +GE A + KAI
Sbjct: 400 FYHNRGFSQRKLGNYREAVKDYTMALSLDPQHFKAYYNRAFCYDKLGEGANAIADYTKAI 459
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
+ + A+ + + + A+ + + +D Y+ RG++ G+ A
Sbjct: 460 AIQDDNPNAYHNRGAALEKAGRLDDAIADYTRAIQLDDGNPFTYNARGIVYDRRGKSDAA 519
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++DL+ + + P+N RA + + + EAV
Sbjct: 520 LQDLTQAITLSPNNAIFYQNRAFVFQNMERFPEAV 554
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 130/326 (39%), Gaps = 36/326 (11%)
Query: 314 DSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRI 373
D A D N N++ Y S K + E+ + L +A N+ FC ++
Sbjct: 388 DKAIALDGN-NADFYHNRGFSQRKLGNYREAVKDYTMALS-LDPQHFKAYYNRAFCYDKL 445
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
+ + D Y AI+I D P A RG A L+
Sbjct: 446 GEGANAIAD--------------YTKAIAIQDD-------NPNAYHNRGAALEKAGRLDD 484
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI+D+T AIQ + + RG G+S A+QDL++A+ PN+A R V
Sbjct: 485 AIADYTRAIQLDDGNPFTYNARGIVYDRRGKSDAALQDLTQAITLSPNNAIFYQNRAFVF 544
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ F AV D + + L E K + E K +E L + L ++F
Sbjct: 545 QNMERFPEAVHDYNTSLALLDEEKR------FTNGATTESKATQE--LNRLILKQHFNRG 596
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ H + + E A+ V+ + A + RG+ +G HK A++D S +
Sbjct: 597 FCHARE-----GHYEAAIYDFSMVMATNPDNPVALYNRGICHDKVGNHKLAVEDFSHLIE 651
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
+D N E + R + ++GEY A+
Sbjct: 652 LDAENAEAHFSRGTALESLGEYAMAL 677
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG A G AI D S + P++ L+ RGI + K + AVED S ++LD
Sbjct: 595 RGFCHAREGHYEAAIYDFSMVMATNPDNPVALYNRGICHDKVGNHKLAVEDFSHLIELDA 654
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF--LEAWGHLTQF---YQDLANSEK 569
EN A+ G AL S+GEY A + + A +LD + L G L +F + + S++
Sbjct: 655 ENAEAHFSRGTALESLGEYAMALDDYAVAFKLDVDHSGLVEEGALAKFKSEHHAMVASQR 714
Query: 570 ALECLQQ 576
L L++
Sbjct: 715 VLRLLKE 721
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
A+ LRG+ L KAI D ++ L IDPS+ Y RA+C++ G Y A++
Sbjct: 118 AFFLRGICHVKLSCIDKAIADFTAALDIDPSHSRSTYERAACHNRKGNYTAAIL 171
>gi|298252040|ref|ZP_06975843.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
gi|297546632|gb|EFH80500.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
Length = 1170
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 1/249 (0%)
Query: 392 VNE-GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
+NE GKY A++ ++++++ DP +G+ E A++ F E I+ +P + E
Sbjct: 345 LNELGKYEEALATYEEVIRLDPNGARIYSNKGSVLFQLGRYEEAVAAFEEHIRLDPESPE 404
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ +G+ AL EA+ +AL +P A + +G + K + A+ +
Sbjct: 405 AYFNKGKTLIALDRPEEALAMFEQALWLDPYDARKYYHKGNMLMALKRYEEALVVFEQSI 464
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+LD E AY G LS +G Y +A + + + D N E + L E+A
Sbjct: 465 QLDPEPVDAYAQRGDILSELGRYAEALAMYEQVLARDPNRAEMYVKQGSLLYMLDRFEEA 524
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
+ L+Q L +D ++ Y + L LG+ ++A+ L + +DP N + + +
Sbjct: 525 ADALEQALCLDPGLTQVYLAQAGPLQRLGRLEEAVAALEQAIHLDPKNADAYFSQGGMLI 584
Query: 631 AIGEYREAV 639
+ Y EA+
Sbjct: 585 TLKRYGEAL 593
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 30/252 (11%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
++ RL +G G+Y A++ +Q L+ DP AL+
Sbjct: 910 TIALRLDQGQFLYTLGRYEEALAAVEQALRLDPEDIRALL------------------LE 951
Query: 440 EAIQSNPSAG-EAWKRRGQARAALGESV-----EAIQDLSKALEFEPNSADILHERGIVN 493
E IQS S+G + +RRG A+ E V EA++ +A+ +P+ + L RG
Sbjct: 952 EGIQSARSSGTQPERRRGIPLASQIEMVPDKVLEALKRQEEAMHPDPDRIEKLVARGKDL 1011
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF--L 551
FK K +N A+E + + LD + AY L + K A E +AI+L+ +
Sbjct: 1012 FKRKQYNEALEVIEQAIGLDPNHAEAYEVKSRVLVGLSLKKAALEVLEQAIRLNPYYSDY 1071
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
++G L +L +AL+ +Q ++ D F+ AY ++G +L L +++KA+ +
Sbjct: 1072 SSYGLLLH---ELGRHREALKAFEQHIHFDPGFAPAYFMKGKILLFLKRYEKALIEFERA 1128
Query: 612 LGIDPSNIECLY 623
+ +DP NI Y
Sbjct: 1129 IHLDP-NIADFY 1139
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 110/241 (45%), Gaps = 9/241 (3%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
G+Y A++ F++ ++ DP PEA +G T A R E A++ F +A+ +P +
Sbjct: 383 GRYEEAVAAFEEHIRLDPESPEAYFNKGKTLIALDRP-EEALAMFEQALWLDPYDARKYY 441
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+G AL EA+ ++++ +P D +RG + + + A+ + D
Sbjct: 442 HKGNMLMALKRYEEALVVFEQSIQLDPEPVDAYAQRGDILSELGRYAEALAMYEQVLARD 501
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
Y G L + +++A +A +A+ LD + + Q L E+A+
Sbjct: 502 PNRAEMYVKQGSLLYMLDRFEEAADALEQALCLDPGLTQVYLAQAGPLQRLGRLEEAVAA 561
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
L+Q +++D + + AY +G +L L ++ +A+ + + + P + A Y A G
Sbjct: 562 LEQAIHLDPKNADAYFSQGGMLITLKRYGEALNAIEQYMRLRPDD-------AFAYVARG 614
Query: 634 E 634
E
Sbjct: 615 E 615
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
VD RG G+YA A+++++Q+L DP E + +G+ E A
Sbjct: 470 PVDAYAQRGDILSELGRYAEALAMYEQVLARDPNRAEMYVKQGSLLYMLDRFEEAADALE 529
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A+ +P + + + LG EA+ L +A+ +P +AD +G + K +
Sbjct: 530 QALCLDPGLTQVYLAQAGPLQRLGRLEEAVAALEQAIHLDPKNADAYFSQGGMLITLKRY 589
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
A+ + ++L ++ AY G L S+ ++A EA +AI+L+ N
Sbjct: 590 GEALNAIEQYMRLRPDDAFAYVARGEVLVSLNRPEEALEAVEQAIRLNPN 639
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A + +G A + E ++ EAI+ +P+ RG A L EA+ + A+
Sbjct: 675 AFVAQGEALEEGKRCEEILAVLDEAIRLDPTNAYHHNDRGTALFFLKRYKEALTEFQLAI 734
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
P A +G + F+ K + A+ + ++LD AY GL L + Y++A
Sbjct: 735 LLHPRYAIAHQNKGRILFELKCYEEALAEFEEALRLDPTIAEAYLNKGLLLLELERYEEA 794
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
+QLD + +L + L E+AL+ +Q+L + + Y +G L+
Sbjct: 795 LATFQDGVQLDPPDARIYHNLGAVLRMLERDEEALDVYEQMLQLGLGSADLYLSQGGALY 854
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L ++++A+ + L +DP NI + +++ Y EA++
Sbjct: 855 ALERYEEALVAVEQALRLDPDNIASHLAQGQILYSLEHYEEALV 898
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 134/644 (20%), Positives = 247/644 (38%), Gaps = 114/644 (17%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
+L + + IR LD A+ Y N+ QL ++ + ++ ++LDP +AY
Sbjct: 354 ALATYEEVIR-LDPNGARIY-----SNKGSVLFQLGRYEEAVAAFEEHIRLDPESPEAYF 407
Query: 108 LKGCAFSALGRKEEALSV-----WEKGYE--HALHQSADLKQFLELEELLTAAKQDRSVT 160
KG AL R EEAL++ W Y+ H+ L EE L +Q +
Sbjct: 408 NKGKTLIALDRPEEALAMFEQALWLDPYDARKYYHKGNMLMALKRYEEALVVFEQSIQLD 467
Query: 161 CEYDVSNSMSSLTVSESGLNAND-KMSE--TSENHNKSDI----------CDSSSQSRDV 207
E + + +SE G A M E + + N++++ D ++ D
Sbjct: 468 PEPVDAYAQRGDILSELGRYAEALAMYEQVLARDPNRAEMYVKQGSLLYMLDRFEEAADA 527
Query: 208 SETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSG-LHINGKLREVSENHNGSSDGSKSTHA 266
E LC G + V ++++G L G+L E + A
Sbjct: 528 LEQA--------LCLD-----PGLTQVYLAQAGPLQRLGRLEE-------------AVAA 561
Query: 267 SRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSA---------- 316
A ++ +++D + G + +R+G N + +L D A
Sbjct: 562 LEQAIHLDPKNADAYFSQGGML---ITLKRYGEALNAIEQ-YMRLRPDDAFAYVARGEVL 617
Query: 317 -SLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK 375
SLN E+ ++ + S + + K+ KE E ++ K
Sbjct: 618 VSLNRPEEALEAVEQAIRLNPNDSRAYALKKKIELVLSPGKEAPAELEQ----------K 667
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAI-SIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
+ V +++G A + EGK I ++ D+ ++ DP RGTA F + + A
Sbjct: 668 TVPAQVGAFVAQGEA-LEEGKRCEEILAVLDEAIRLDPTNAYHHNDRGTALFFLKRYKEA 726
Query: 435 ISDFTEAI----------------------------------QSNPSAGEAWKRRGQARA 460
+++F AI + +P+ EA+ +G
Sbjct: 727 LTEFQLAILLHPRYAIAHQNKGRILFELKCYEEALAEFEEALRLDPTIAEAYLNKGLLLL 786
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
L EA+ ++ +P A I H G V + A++ ++L + Y
Sbjct: 787 ELERYEEALATFQDGVQLDPPDARIYHNLGAVLRMLERDEEALDVYEQMLQLGLGSADLY 846
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G AL ++ Y++A A +A++LD + + + Q L + E+AL +Q L++
Sbjct: 847 LSQGGALYALERYEEALVAVEQALRLDPDNIASHLAQGQILYSLEHYEEALVVAEQTLHL 906
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ +G L+ LG++++A+ + L +DP +I L L
Sbjct: 907 NPDTIALRLDQGQFLYTLGRYEEALAAVEQALRLDPEDIRALLL 950
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ A+ F+Q + DP + A +G F + E A+ +F AI +P+ + ++
Sbjct: 1082 GRHREALKAFEQHIHFDPGFAPAYFMKGKILLFLKRYEKALIEFERAIHLDPNIADFYQG 1141
Query: 455 RGQARAALG 463
+G+A ALG
Sbjct: 1142 KGKALQALG 1150
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 56/115 (48%)
Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
+L+ +G+Y++A + + I+LD N + + L E+A+ ++ + +D
Sbjct: 344 SLNELGKYEEALATYEEVIRLDPNGARIYSNKGSVLFQLGRYEEAVAAFEEHIRLDPESP 403
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+AY +G L L + ++A+ L +DP + Y + + A+ Y EA++
Sbjct: 404 EAYFNKGKTLIALDRPEEALAMFEQALWLDPYDARKYYHKGNMLMALKRYEEALV 458
>gi|385809655|ref|YP_005846051.1| hypothetical protein IALB_1072 [Ignavibacterium album JCM 16511]
gi|383801703|gb|AFH48783.1| TPR repeat protein [Ignavibacterium album JCM 16511]
Length = 471
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 107/244 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
K+ + D++L+ P E + +G + E AI F +A+ NP+ E +
Sbjct: 55 KFEDGLYFTDKLLEIFPYNSELWLKKGILLNGLMKFEEAIDSFEKALSLNPNDTETLVDK 114
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
A +G +A + L K L+ +P + D G++ + + A+ +K+D +
Sbjct: 115 SAAEENMGLYQQAEESLRKVLDIDPENEDAFFSLGLLYQRQFKYAEAIPYFERAIKIDPD 174
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
Y LG ++ + KA EA+ K + D W + E+A+ C
Sbjct: 175 YVEVYYELGFCYEALNNFDKALEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFD 234
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ F+ A++ +G L LG++++AI+ + IDP + Y AS Y IGE
Sbjct: 235 LATSVRDDFASAWYNKGNTLADLGKYQQAIECFHKVIEIDPYDETAFYNLASVYEEIGEL 294
Query: 636 REAV 639
++AV
Sbjct: 295 QQAV 298
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 122/257 (47%), Gaps = 4/257 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ + A+ N G Y A ++L DP +A G Q + AI F AI+
Sbjct: 112 VDKSAAEENMGLYQQAEESLRKVLDIDPENEDAFFSLGLLYQRQFKYAEAIPYFERAIKI 171
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P E + G AL +A++ K L+F+P +A + +GI+ K AV
Sbjct: 172 DPDYVEVYYELGFCYEALNNFDKALEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVN 231
Query: 505 --DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
DL+ V+ D SA+ G L+ +G+Y++A E K I++D A+ +L Y+
Sbjct: 232 CFDLATSVRDDF--ASAWYNKGNTLADLGKYQQAIECFHKVIEIDPYDETAFYNLASVYE 289
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
++ ++A++ + + D+ + +AY RG LG+++ A++D + + I + +
Sbjct: 290 EIGELQQAVKYYSKAIESDEEYFEAYLARGYCYDSLGKYQLALRDFNKAISISSDDPDAW 349
Query: 623 YLRASCYHAIGEYREAV 639
+A +++G E++
Sbjct: 350 RAKADLEYSLGHLEESI 366
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 111/255 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +GI K+ AI F++ L +P E L+ + A + A + +
Sbjct: 78 LKKGILLNGLMKFEEAIDSFEKALSLNPNDTETLVDKSAAEENMGLYQQAEESLRKVLDI 137
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P +A+ G + EAI +A++ +P+ ++ +E G +F+ A+E
Sbjct: 138 DPENEDAFFSLGLLYQRQFKYAEAIPYFERAIKIDPDYVEVYYELGFCYEALNNFDKALE 197
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ D N S + G+ L G+ ++A A + +F AW + DL
Sbjct: 198 AYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADL 257
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+EC +V+ ID A++ + +G+ ++A+K S + D E
Sbjct: 258 GKYQQAIECFHKVIEIDPYDETAFYNLASVYEEIGELQQAVKYYSKAIESDEEYFEAYLA 317
Query: 625 RASCYHAIGEYREAV 639
R CY ++G+Y+ A+
Sbjct: 318 RGYCYDSLGKYQLAL 332
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 103/255 (40%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
S G+ + KYA AI F++ +K DP Y E G + A+ + + +
Sbjct: 146 FSLGLLYQRQFKYAEAIPYFERAIKIDPDYVEVYYELGFCYEALNNFDKALEAYEKFLDF 205
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P W +G G+ EA+ A + A + +G + A+E
Sbjct: 206 DPYNASGWYNKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQQAIE 265
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++D +++A+ L IGE ++A + + KAI+ D + EA+ Y L
Sbjct: 266 CFHKVIEIDPYDETAFYNLASVYEEIGELQQAVKYYSKAIESDEEYFEAYLARGYCYDSL 325
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+ AL + + I A+ + L + LG +++IK + P + Y
Sbjct: 326 GKYQLALRDFNKAISISSDDPDAWRAKADLEYSLGHLEESIKSYLEAARLQPDGYDIWYN 385
Query: 625 RASCYHAIGEYREAV 639
A Y+ ++ A+
Sbjct: 386 LAETYYEANKWLNAL 400
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 101/231 (43%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI V GK A++ FD + A +G A + + AI F + I+ +
Sbjct: 215 NKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQQAIECFHKVIEID 274
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ +GE +A++ SKA+E + + RG + A+ D
Sbjct: 275 PYDETAFYNLASVYEEIGELQQAVKYYSKAIESDEEYFEAYLARGYCYDSLGKYQLALRD 334
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + + ++ A+ S+G +++ +++L+A +L + + W +L + Y +
Sbjct: 335 FNKAISISSDDPDAWRAKADLEYSLGHLEESIKSYLEAARLQPDGYDIWYNLAETYYEAN 394
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
ALE Q L I+ + S + + + + L + ++AI L I+P
Sbjct: 395 KWLNALEAYDQCLRINPKDSNSMYSKAKINFILHRTQEAIDCLRKAFEINP 445
>gi|67921469|ref|ZP_00514987.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
gi|67856581|gb|EAM51822.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
Length = 248
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 375 KSKSISVDF--RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
K+ +++VD + +GI + G Y A+ F+Q++ E+P A RG A + + E
Sbjct: 50 KTSALTVDTVEMVQQGIEKSRRGNYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFE 109
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A++DFT A++ +P EA+ RG LGE +AI D KALE PN A + G+
Sbjct: 110 QALADFTIALKLDPQMVEAYVNRGNVYLQLGEDEKAIADYEKALEINPNDAFAQNNLGLA 169
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ A D + V +D AY GLAL +GE + A
Sbjct: 170 HLNSGSPGLAKIDFTEAVMIDPLYGEAYYNRGLALLDLGERENA 213
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 34/191 (17%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
++ +G ++ + + A+ DF + I NP A+ RG A ++LG+ +A+ D + AL+
Sbjct: 61 MVQQGIEKSRRGNYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFEQALADFTIALK 120
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P + RG V + + A+ D ++++ + A LGLA
Sbjct: 121 LDPQMVEAYVNRGNVYLQLGEDEKAIADYEKALEINPNDAFAQNNLGLA----------- 169
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
HL LA + + + ID + +AY+ RGL L
Sbjct: 170 ------------------HLNSGSPGLAKID-----FTEAVMIDPLYGEAYYNRGLALLD 206
Query: 598 LGQHKKAIKDL 608
LG+ + AI D
Sbjct: 207 LGERENAIADF 217
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A + G++ A++ F LK DP EA + RG E E AI+D+ +A++
Sbjct: 96 FNRGYAHSSLGQFEQALADFTIALKLDPQMVEAYVNRGNVYLQLGEDEKAIADYEKALEI 155
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A G A G A D ++A+ +P + + RG+ + A+
Sbjct: 156 NPNDAFAQNNLGLAHLNSGSPGLAKIDFTEAVMIDPLYGEAYYNRGLALLDLGERENAIA 215
Query: 505 DL 506
D
Sbjct: 216 DF 217
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 51 NWSKAIRILDSLLAQSYE-IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
N+ A++ + ++A++ + I NR + +S L + + D AL+LDP +++AY+ +
Sbjct: 73 NYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFEQALADFTIALKLDPQMVEAYVNR 132
Query: 110 GCAFSALGRKEEALSVWEKGYE 131
G + LG E+A++ +EK E
Sbjct: 133 GNVYLQLGEDEKAIADYEKALE 154
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++GI + ++ A++D + + + ++ AY G A SS+G++++A A++LD
Sbjct: 63 QQGIEKSRRGNYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFEQALADFTIALKLD 122
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+EA+ + Y L EKA+ ++ L I+ + A + GL G A D
Sbjct: 123 PQMVEAYVNRGNVYLQLGEDEKAIADYEKALEINPNDAFAQNNLGLAHLNSGSPGLAKID 182
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + IDP E Y R +GE A+
Sbjct: 183 FTEAVMIDPLYGEAYYNRGLALLDLGERENAI 214
>gi|383771778|ref|YP_005450843.1| hypothetical protein S23_35310 [Bradyrhizobium sp. S23321]
gi|381359901|dbj|BAL76731.1| hypothetical protein S23_35310 [Bradyrhizobium sp. S23321]
Length = 366
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+ + ++++P+ A RG+ G++ A+ D ++A++ +P +D+ + RGI
Sbjct: 37 ITGCSAVLKADPNDVHALANRGEMFRRKGDAERALADFNRAIDLDPKDSDLWYNRGIAYD 96
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D + A+ D + ++L+ + Y G +L EY++A + +AI+LD F A+
Sbjct: 97 DLGDKDHAIADYTRAIRLNARDALYYNNRGNSLIDKNEYERAMADYDQAIKLDPKFALAY 156
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ Y+D ++AL + +D + AY R + G +A+ D + L +
Sbjct: 157 FNRGTAYRDHRQDDRALADFDLSIKLDPNYGPAYGNRARVFRDRGDRPRALADFAKSLQL 216
Query: 615 DPSNIECLYLRASCYHAIGEY 635
P+N Y R + Y EY
Sbjct: 217 SPNNDRDFYARGNMYFDTYEY 237
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 70/126 (55%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + +++ +Y A++ +DQ +K DP + A RGTA R+ + A++DF +I+ +
Sbjct: 124 NRGNSLIDKNEYERAMADYDQAIKLDPKFALAYFNRGTAYRDHRQDDRALADFDLSIKLD 183
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ G A+ R + G+ A+ D +K+L+ PN+ + RG + F ++ A+ED
Sbjct: 184 PNYGPAYGNRARVFRDRGDRPRALADFAKSLQLSPNNDRDFYARGNMYFDTYEYVLALED 243
Query: 506 LSACVK 511
+K
Sbjct: 244 YDRSIK 249
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 8/252 (3%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG +G A++ F++ + DP + RG A + + AI+D+T AI+ N
Sbjct: 56 NRGEMFRRKGDAERALADFNRAIDLDPKDSDLWYNRGIAYDDLGDKDHAIADYTRAIRLN 115
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RG + E A+ D +A++ +P A RG + + A+ D
Sbjct: 116 ARDALYYNNRGNSLIDKNEYERAMADYDQAIKLDPKFALAYFNRGTAYRDHRQDDRALAD 175
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL----DRNFLEAWGHLTQFY 561
+KLD AY G+ +A K++QL DR+F A G++ Y
Sbjct: 176 FDLSIKLDPNYGPAYGNRARVFRDRGDRPRALADFAKSLQLSPNNDRDFY-ARGNM---Y 231
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
D ALE + + + + ++ R LG+ + A+ D L + ++ +
Sbjct: 232 FDTYEYVLALEDYDRSIKANGNRADVFNSRCFTRAILGRLEAALADCDQSLRMASNDPDT 291
Query: 622 LYLRASCYHAIG 633
L RA + +G
Sbjct: 292 LDSRALAHLKLG 303
>gi|307152867|ref|YP_003888251.1| hypothetical protein Cyan7822_3021 [Cyanothece sp. PCC 7822]
gi|306983095|gb|ADN14976.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 846
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 136/304 (44%), Gaps = 33/304 (10%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEG-------KYASAISIFDQ- 406
L ET + RN+ F ++ V + +A +N G ++ AI+ FDQ
Sbjct: 266 LTETEVNSIRNQLF---------NLYVPIKKEDALAWINYGNQLFRLEEFEKAITAFDQA 316
Query: 407 --ILKEDPMYP---------EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+LK P P +A +G F R+L + +F AIQ + AW+
Sbjct: 317 ITVLKSTPN-PSSQTKQDLAKAYYAKGLTLWFTRDLSQSAQEFIHAIQQDDQFYSAWRWL 375
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILH-ERGIVNFKFKDFNAAVEDLSACVKLDK 514
G + +A++ +K E P +L+ ERG V + A+ D + ++L K
Sbjct: 376 GYDLFLMRNYTDALKVYNKLFEMNPKGDFVLYTERGSVLAYSGHYQEAIADYNKAIEL-K 434
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY GLA S + EY+KA K I+L+ + A+ + Y+DL + +KAL
Sbjct: 435 PHPWAYNKRGLAYSELEEYQKAIADFNKTIELEPDADYAYNNRGNVYKDLKDYDKALADY 494
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ I + AY+ RG L L +++KA+ D + G+ ID N R Y + +
Sbjct: 495 NKA--ISYNYVGAYNNRGNLYLDLKEYQKALADFNKGIEIDSENSLLYGNRGRVYSELKD 552
Query: 635 YREA 638
Y++A
Sbjct: 553 YKKA 556
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 15/251 (5%)
Query: 397 YASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
Y A+ +++++ + +P +Y E RG+ A+ + AI+D+ +AI+ P A
Sbjct: 385 YTDALKVYNKLFEMNPKGDFVLYTE----RGSVLAYSGHYQEAIADYNKAIELKPHPW-A 439
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ +RG A + L E +AI D +K +E EP++ + RG V KD++ A+ D + +
Sbjct: 440 YNKRGLAYSELEEYQKAIADFNKTIELEPDADYAYNNRGNVYKDLKDYDKALADYNKAIS 499
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ AY G + EY+KA K I++D +G+ + Y +L + +KA
Sbjct: 500 YNY--VGAYNNRGNLYLDLKEYQKALADFNKGIEIDSENSLLYGNRGRVYSELKDYKKAF 557
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN---IECLYLRASC 628
+ + + I+ S Y LR + L + IKD + + + P +E RA
Sbjct: 558 DDYSKAIEINPNQSFYYTLRARVSQDLKDYNTVIKDYTKVIELKPEQEKIVEAYANRAGA 617
Query: 629 YHAIGEYREAV 639
Y + E+++A+
Sbjct: 618 YQNLKEFQKAL 628
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 8/231 (3%)
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y A RG +E + A++DF + I+ + + RG+ + L + +A D S
Sbjct: 502 YVGAYNNRGNLYLDLKEYQKALADFNKGIEIDSENSLLYGNRGRVYSELKDYKKAFDDYS 561
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS---AYTYLGLALSSI 530
KA+E PN + R V+ KD+N ++D + ++L E + AY A ++
Sbjct: 562 KAIEINPNQSFYYTLRARVSQDLKDYNTVIKDYTKVIELKPEQEKIVEAYANRAGAYQNL 621
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAY 588
E++KA + K I+L + + +G++ + Y + + +K ++ + + I ++ Y
Sbjct: 622 KEFQKALDDANKVIELVPD--QFYGYVVRGGIYAESGDYQKTVDDYTKSIEIYPKWFVLY 679
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ RG L Q++ A+ D + + I+P NI+ + RA YH G Y AV
Sbjct: 680 NRRGQAYFNLKQYQNALADYTKSVEIEP-NIDGYFGRAIIYHKQGNYEAAV 729
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 4/182 (2%)
Query: 413 MYPEALIG---RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
+ P+ G RG A + + + D+T++I+ P + RRGQA L + A+
Sbjct: 637 LVPDQFYGYVVRGGIYAESGDYQKTVDDYTKSIEIYPKWFVLYNRRGQAYFNLKQYQNAL 696
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
D +K++E EPN D R I+ K ++ AAV+D + LD+ N + + LGL L
Sbjct: 697 ADYTKSVEIEPN-IDGYFGRAIIYHKQGNYEAAVQDYKQILNLDQNNLATWNNLGLILYE 755
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
G+ A + ++ E L + EK L + L +D+R+S +
Sbjct: 756 TGDIANAIKPWTVIVESKAPIAETQLALAVALYNQGEQEKGLALAENALTLDRRYSDVKY 815
Query: 590 LR 591
L+
Sbjct: 816 LQ 817
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Query: 429 RELEAAISDFTEAIQSNP---SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
++ I D+T+ I+ P EA+ R A L E +A+ D +K +E P+
Sbjct: 585 KDYNTVIKDYTKVIELKPEQEKIVEAYANRAGAYQNLKEFQKALDDANKVIELVPDQFYG 644
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
RG + + D+ V+D + +++ + Y G A ++ +Y+ A + K+++
Sbjct: 645 YVVRGGIYAESGDYQKTVDDYTKSIEIYPKWFVLYNRRGQAYFNLKQYQNALADYTKSVE 704
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ N +G Y N E A++ +Q+L +D+ ++ GL+L+ G AI
Sbjct: 705 IEPNIDGYFGRAI-IYHKQGNYEAAVQDYKQILNLDQNNLATWNNLGLILYETGDIANAI 763
Query: 606 KDLS 609
K +
Sbjct: 764 KPWT 767
>gi|333987252|ref|YP_004519859.1| hypothetical protein MSWAN_1037 [Methanobacterium sp. SWAN-1]
gi|333825396|gb|AEG18058.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 369
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 123/270 (45%), Gaps = 3/270 (1%)
Query: 373 ISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
++K + D+ L+ +G A V GK I D+ +K DP +G
Sbjct: 38 VNKVLELDPDYALAWNLKGGALVGLGKLDEGIKCLDEGIKLDPTLSSLWYSKGVISQELG 97
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ A+ + +AI+ + + + R+G LG +++ KAL+ PN D ++R
Sbjct: 98 KYAEAVGYYDKAIELGFISSDIFYRKGTVLTELGRYGMSMEPFDKALKINPNFVDAWNDR 157
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+V+ + + A+E +K+D +N A+ +A + +Y ++ E K ++++
Sbjct: 158 AMVSLRLNRYEEALEYYDNALKVDPQNVEAFMGKYMAFMGLDKYPESLEYLDKVLEIESQ 217
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
W L E+AL C +VL +D + +A+ +G L L + ++A+K L
Sbjct: 218 HTSLWASRGILLNQLGRYEEALRCSNKVLKLDPKEPRAWKTKGKSLVELKRPEEALKSLE 277
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L +DP + + + + + +++E++
Sbjct: 278 EALKLDPKSSDVWFNKGIALSQLEKFKESL 307
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 113/236 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G+ GKYA A+ +D+ ++ + + +GT ++ F +A++ N
Sbjct: 88 SKGVISQELGKYAEAVGYYDKAIELGFISSDIFYRKGTVLTELGRYGMSMEPFDKALKIN 147
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +AW R L EA++ AL+ +P + + + + + ++E
Sbjct: 148 PNFVDAWNDRAMVSLRLNRYEEALEYYDNALKVDPQNVEAFMGKYMAFMGLDKYPESLEY 207
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L ++++ ++ S + G+ L+ +G Y++A K ++LD AW + +L
Sbjct: 208 LDKVLEIESQHTSLWASRGILLNQLGRYEEALRCSNKVLKLDPKEPRAWKTKGKSLVELK 267
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
E+AL+ L++ L +D + S + +G+ L L + K+++ L ++P+N++
Sbjct: 268 RPEEALKSLEEALKLDPKSSDVWFNKGIALSQLEKFKESLNCFEKALNLNPNNVQA 323
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 110/220 (50%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
+ A+ + +++L+ DP Y A +G A +L+ I E I+ +P+ W +G
Sbjct: 31 FKKALGLVNKVLELDPDYALAWNLKGGALVGLGKLDEGIKCLDEGIKLDPTLSSLWYSKG 90
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
LG+ EA+ KA+E S+DI + +G V + + ++E +K++
Sbjct: 91 VISQELGKYAEAVGYYDKAIELGFISSDIFYRKGTVLTELGRYGMSMEPFDKALKINPNF 150
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A+ + + Y++A E + A+++D +EA+ + L ++LE L +
Sbjct: 151 VDAWNDRAMVSLRLNRYEEALEYYDNALKVDPQNVEAFMGKYMAFMGLDKYPESLEYLDK 210
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
VL I+ + + + RG+LL+ LG++++A++ + L +DP
Sbjct: 211 VLEIESQHTSLWASRGILLNQLGRYEEALRCSNKVLKLDP 250
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 108/230 (46%), Gaps = 6/230 (2%)
Query: 416 EALIGRGTARAFQRELEA------AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
++L+ + T+ +E ++ A+ + ++ +P AW +G A LG+ E I
Sbjct: 10 KSLVKKATSLMINKEYQSLNSFKKALGLVNKVLELDPDYALAWNLKGGALVGLGKLDEGI 69
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
+ L + ++ +P + + + +G+++ + + AV ++L + + G L+
Sbjct: 70 KCLDEGIKLDPTLSSLWYSKGVISQELGKYAEAVGYYDKAIELGFISSDIFYRKGTVLTE 129
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+G Y + E KA++++ NF++AW L E+ALE L +D + +A+
Sbjct: 130 LGRYGMSMEPFDKALKINPNFVDAWNDRAMVSLRLNRYEEALEYYDNALKVDPQNVEAFM 189
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + GL ++ ++++ L L I+ + R + +G Y EA+
Sbjct: 190 GKYMAFMGLDKYPESLEYLDKVLEIESQHTSLWASRGILLNQLGRYEEAL 239
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 83/171 (48%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+V+ + + +A + KY ++ D++L+ + + RG E A+
Sbjct: 184 NVEAFMGKYMAFMGLDKYPESLEYLDKVLEIESQHTSLWASRGILLNQLGRYEEALRCSN 243
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+ ++ +P AWK +G++ L EA++ L +AL+ +P S+D+ +GI + + F
Sbjct: 244 KVLKLDPKEPRAWKTKGKSLVELKRPEEALKSLEEALKLDPKSSDVWFNKGIALSQLEKF 303
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
++ + L+ N A T GL+L + ++A ++ KA++L +F
Sbjct: 304 KESLNCFEKALNLNPNNVQACTAKGLSLEKLENPEEALRSYDKALKLKMDF 354
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
VD R + + +Y A+ +D LK DP EA +G+ A + ++ +
Sbjct: 151 VDAWNDRAMVSLRLNRYEEALEYYDNALKVDPQNVEAFMGKYMAFMGLDKYPESLEYLDK 210
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
++ W RG LG EA++ +K L+ +P +G + K
Sbjct: 211 VLEIESQHTSLWASRGILLNQLGRYEEALRCSNKVLKLDPKEPRAWKTKGKSLVELKRPE 270
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A++ L +KLD ++ + G+ALS + ++K++ KA+ L+ N ++A
Sbjct: 271 EALKSLEEALKLDPKSSDVWFNKGIALSQLEKFKESLNCFEKALNLNPNNVQACTAKGLS 330
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKA 587
+ L N E+AL + L + F A
Sbjct: 331 LEKLENPEEALRSYDKALKLKMDFEPA 357
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 12 RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLL-AQSYEIQ 70
RLN+ + + D ++VD A + L + +++ LD +L +S
Sbjct: 163 RLNRYEEALEYYDNALKVDPQNVEAFMGKY--MAFMGLDKYPESLEYLDKVLEIESQHTS 220
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
+R +QL ++ +R +K L+LDP +A+ KG + L R EEAL K
Sbjct: 221 LWASRGILLNQLGRYEEALRCSNKVLKLDPKEPRAWKTKGKSLVELKRPEEAL----KSL 276
Query: 131 EHAL 134
E AL
Sbjct: 277 EEAL 280
>gi|386811383|ref|ZP_10098609.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386406107|dbj|GAB61490.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 609
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 13/264 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++G+A GK+ AI +++ L+ P E + +G EAAI AI+
Sbjct: 306 NKGLALSRTGKHEDAILAYEKALQIQPDSYETMTNKGGELFHMGRYEAAIKVLDNAIKLR 365
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFE--------PNSADILHE----RGIVN 493
P + W +G A LG +EA++ K + P A I +E +G+
Sbjct: 366 PDYPQVWNSKGWALLRLGRFMEAMKSFDKVAQIITDEEAMNIPRLAKIKYEALSNKGLAL 425
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ +++ AV+ + L + S + GL L + +Y++A A KA L N EA
Sbjct: 426 IQLQNYEEAVKVFEKALSLKPDVFSLWINKGLCLVQLKKYEEALNAFDKAATLSGNVHEA 485
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
W + ++++ +AL+ + + F A + +GLLL +G HK+AI+ + L
Sbjct: 486 WNYKGYVFEEIGKQLEALDAYDKAIKTKPDFFGALNNKGLLLDVVGNHKEAIEAYNQALR 545
Query: 614 IDPSNIECLYLRASCYHAIGEYRE 637
I P + + + +C A+ Y+E
Sbjct: 546 IKP-DFDAAWFNKACAQALLLYKE 568
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 1/244 (0%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y A ++ L+ P EA + + + AI F +AIQ P EAW +G
Sbjct: 44 YQEAFDAYENALQIKPDAFEAWYNKAIILDYFGKYADAIESFEKAIQYKPDYYEAWYMKG 103
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
+ G EA++ KALE +P+ L+ +G V + A++ +K+ +
Sbjct: 104 RVLDHAGRYDEAVKAFDKALEIKPDYVTALYNKGNVLDHIGSIDMAIDTYDRIIKIKSDA 163
Query: 517 KSAYTYLGLALSSIGEYK-KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
A+ GLAL+ I E + +A +A+ KAI ++ + EAW + + L ++A+
Sbjct: 164 YEAWNNKGLALAKIPERRNEALDAYDKAIAINPKYYEAWINKGNCFVRLRKYQEAVHAYD 223
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
Q + I A+ +G L LG+++ A+ + + + P + + A+G Y
Sbjct: 224 QAIEIKPSEHAAWADKGFTLADLGKYEDAVYAFNKAIELKPDSYGAWNGKGLALDALGRY 283
Query: 636 REAV 639
EA+
Sbjct: 284 EEAL 287
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
Query: 372 RISKSKSISVDFRLSRGIA--QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
RI K KS + + ++G+A ++ E + A+ +D+ + +P Y EA I +G R
Sbjct: 155 RIIKIKSDAYEAWNNKGLALAKIPERR-NEALDAYDKAIAINPKYYEAWINKGNCFVRLR 213
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + A+ + +AI+ PS AW +G A LG+ +A+ +KA+E +P+S + +
Sbjct: 214 KYQEAVHAYDQAIEIKPSEHAAWADKGFTLADLGKYEDAVYAFNKAIELKPDSYGAWNGK 273
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G+ + A+ +++ + A+T GLALS G+++ A A+ KA+Q+ +
Sbjct: 274 GLALDALGRYEEALAAYEKTIEIQPNSYGAWTNKGLALSRTGKHEDAILAYEKALQIQPD 333
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
E + + E A++ L + + + + ++ +G L LG+ +A+K
Sbjct: 334 SYETMTNKGGELFHMGRYEAAIKVLDNAIKLRPDYPQVWNSKGWALLRLGRFMEAMK 390
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 139/325 (42%), Gaps = 14/325 (4%)
Query: 328 YSKSSISD--NKSSDSTESRSK-LSFK------WDMLKETSNEAKRNKKFCVTRISKSKS 378
Y+K+ I D K +D+ ES K + +K W M + A R + V K+
Sbjct: 66 YNKAIILDYFGKYADAIESFEKAIQYKPDYYEAWYMKGRVLDHAGRYDE-AVKAFDKALE 124
Query: 379 ISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAA 434
I D+ ++G + G AI +D+I+K EA +G A A A
Sbjct: 125 IKPDYVTALYNKGNVLDHIGSIDMAIDTYDRIIKIKSDAYEAWNNKGLALAKIPERRNEA 184
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
+ + +AI NP EAW +G L + EA+ +A+E +P+ ++G
Sbjct: 185 LDAYDKAIAINPKYYEAWINKGNCFVRLRKYQEAVHAYDQAIEIKPSEHAAWADKGFTLA 244
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ AV + ++L ++ A+ GLAL ++G Y++A A+ K I++ N AW
Sbjct: 245 DLGKYEDAVYAFNKAIELKPDSYGAWNGKGLALDALGRYEEALAAYEKTIEIQPNSYGAW 304
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ E A+ ++ L I + +G L +G+++ AIK L + + +
Sbjct: 305 TNKGLALSRTGKHEDAILAYEKALQIQPDSYETMTNKGGELFHMGRYEAAIKVLDNAIKL 364
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
P + + +G + EA+
Sbjct: 365 RPDYPQVWNSKGWALLRLGRFMEAM 389
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 124/294 (42%), Gaps = 39/294 (13%)
Query: 361 EAKRNKKFCVTRISKSKSI------SVDFRLS-------RGIAQVNEGKYASAISIFDQI 407
EA NK C R+ K + +++ + S +G + GKY A+ F++
Sbjct: 200 EAWINKGNCFVRLRKYQEAVHAYDQAIEIKPSEHAAWADKGFTLADLGKYEDAVYAFNKA 259
Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
++ P A G+G A E A++ + + I+ P++ AW +G A + G+ +
Sbjct: 260 IELKPDSYGAWNGKGLALDALGRYEEALAAYEKTIEIQPNSYGAWTNKGLALSRTGKHED 319
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AI KAL+ +P+S + + +G F + AA++ L +KL + + G AL
Sbjct: 320 AILAYEKALQIQPDSYETMTNKGGELFHMGRYEAAIKVLDNAIKLRPDYPQVWNSKGWAL 379
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC--LQQVLYIDKRFS 585
+G + +A ++ K Q + E+A+ L ++ Y
Sbjct: 380 LRLGRFMEAMKSFDKVAQ------------------IITDEEAMNIPRLAKIKY------ 415
Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+A +GL L L +++A+K L + P + C + +Y EA+
Sbjct: 416 EALSNKGLALIQLQNYEEAVKVFEKALSLKPDVFSLWINKGLCLVQLKKYEEAL 469
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 23/262 (8%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ--------SNP 446
G+Y +AI + D +K P YP+ +G A A+ F + Q + P
Sbjct: 349 GRYEAAIKVLDNAIKLRPDYPQVWNSKGWALLRLGRFMEAMKSFDKVAQIITDEEAMNIP 408
Query: 447 SAG----EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
EA +G A L EA++ KAL +P+ + +G+ + K + A
Sbjct: 409 RLAKIKYEALSNKGLALIQLQNYEEAVKVFEKALSLKPDVFSLWINKGLCLVQLKKYEEA 468
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ L A+ Y G IG+ +A +A+ KAI+ +F A +
Sbjct: 469 LNAFDKAATLSGNVHEAWNYKGYVFEEIGKQLEALDAYDKAIKTKPDFFGALNNKGLLLD 528
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYH----LRGLLLH---GLGQHKKAIKDLSSGL-GI 614
+ N ++A+E Q L I F A+ + LLL+ L KKAI +L+ G I
Sbjct: 529 VVGNHKEAIEAYNQALRIKPDFDAAWFNKACAQALLLYKEDALNSLKKAI-ELNPGYKNI 587
Query: 615 DPSNIECLYLR--ASCYHAIGE 634
SN + L L+ A IGE
Sbjct: 588 AKSNPDLLRLKGDAGFEKIIGE 609
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 37/185 (20%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ R++K K ++ ++G+A + Y A+ +F++ L P I +G +
Sbjct: 407 IPRLAKIKYEALS---NKGLALIQLQNYEEAVKVFEKALSLKPDVFSLWINKGLCLVQLK 463
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ E A++ F +A + + EAW +G +G+ +EA+ KA++ +P
Sbjct: 464 KYEEALNAFDKAATLSGNVHEAWNYKGYVFEEIGKQLEALDAYDKAIKTKP--------- 514
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
DF A+ NK GL L +G +K+A EA+ +A+++ +
Sbjct: 515 --------DFFGAL-----------NNK------GLLLDVVGNHKEAIEAYNQALRIKPD 549
Query: 550 FLEAW 554
F AW
Sbjct: 550 FDAAW 554
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%)
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + L EN A+ + G Y++A +A+ A+Q+ + EAW +
Sbjct: 18 SEGILLAAENYEAFIHKGNDFVRNQMYQEAFDAYENALQIKPDAFEAWYNKAIILDYFGK 77
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
A+E ++ + + +A++++G +L G++ +A+K L I P + LY +
Sbjct: 78 YADAIESFEKAIQYKPDYYEAWYMKGRVLDHAGRYDEAVKAFDKALEIKPDYVTALYNKG 137
Query: 627 SCYHAIG 633
+ IG
Sbjct: 138 NVLDHIG 144
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L L+N+ +A+++ + L+ ++ + N+ C QL+ ++ + DKA L + +
Sbjct: 425 LIQLQNYEEAVKVFEKALSLKPDVFSLWINKGLCLVQLKKYEEALNAFDKAATLSGNVHE 484
Query: 105 AYILKGCAFSALGRKEEALSVWEK 128
A+ KG F +G++ EAL ++K
Sbjct: 485 AWNYKGYVFEEIGKQLEALDAYDK 508
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQD-----ICNRAFCYSQLELHKHVIRDCDKALQLDP 100
LR + +A+ D Q+ EI+ ++ F + L ++ + +KA++L P
Sbjct: 209 FVRLRKYQEAVHAYD----QAIEIKPSEHAAWADKGFTLADLGKYEDAVYAFNKAIELKP 264
Query: 101 TLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
A+ KG A ALGR EEAL+ +EK E
Sbjct: 265 DSYGAWNGKGLALDALGRYEEALAAYEKTIE 295
>gi|327404890|ref|YP_004345728.1| hypothetical protein Fluta_2911 [Fluviicola taffensis DSM 16823]
gi|327320398|gb|AEA44890.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
taffensis DSM 16823]
Length = 364
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 6/246 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GI N+ + AI F++ + DP + A +G A A+ FT I+
Sbjct: 54 NKGIELFNKKNFKEAIGSFNKSISSDPNFTAAYYNKGVAENEAEMYMDALKTFTTLIEKQ 113
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+A+ +RG+A L + +++ +D +++ + N+ + G + F +D+NAA++
Sbjct: 114 KGYSKAYFQRGRAYQGLSDYLKSEKDYEESIRLDANNPKAYYNYGTLKFLQQDYNAAIKY 173
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++LD + AY G Y KA E + A++ + N ++ + +
Sbjct: 174 FTKSIELDPSSPMAYNDRGSCYRMQENYPKAIEDYEAALRKNPNLAFVLNNVGTTKKKMK 233
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP------SNI 619
+ AL + + +D F AY+ RG+ L G AIKD + I+P SN+
Sbjct: 234 DYSGALIAFNRAISVDVNFFLAYNNRGVALLEKGSLDDAIKDFEKAMQINPKYAPAASNL 293
Query: 620 ECLYLR 625
+Y +
Sbjct: 294 AGIYFK 299
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 1/227 (0%)
Query: 367 KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
K T I K K S + RG A Y + +++ ++ D P+A GT +
Sbjct: 104 KTFTTLIEKQKGYSKAY-FQRGRAYQGLSDYLKSEKDYEESIRLDANNPKAYYNYGTLKF 162
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
Q++ AAI FT++I+ +PS+ A+ RG +AI+D AL PN A +L
Sbjct: 163 LQQDYNAAIKYFTKSIELDPSSPMAYNDRGSCYRMQENYPKAIEDYEAALRKNPNLAFVL 222
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ G K KD++ A+ + + +D AY G+AL G A + KA+Q+
Sbjct: 223 NNVGTTKKKMKDYSGALIAFNRAISVDVNFFLAYNNRGVALLEKGSLDDAIKDFEKAMQI 282
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ + A +L Y + +KA E + + ID ++ AY RG+
Sbjct: 283 NPKYAPAASNLAGIYFKRKDFKKAEELASKAIAIDPNYASAYVNRGM 329
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 61/140 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG + Y AI ++ L+++P L GT + ++ A+ F AI +
Sbjct: 191 RGSCYRMQENYPKAIEDYEAALRKNPNLAFVLNNVGTTKKKMKDYSGALIAFNRAISVDV 250
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A+ RG A G +AI+D KA++ P A + FK KDF A E
Sbjct: 251 NFFLAYNNRGVALLEKGSLDDAIKDFEKAMQINPKYAPAASNLAGIYFKRKDFKKAEELA 310
Query: 507 SACVKLDKENKSAYTYLGLA 526
S + +D SAY G+A
Sbjct: 311 SKAIAIDPNYASAYVNRGMA 330
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%)
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ +GI F K+F A+ + + D +AY G+A + Y A + I+
Sbjct: 53 YNKGIELFNKKNFKEAIGSFNKSISSDPNFTAAYYNKGVAENEAEMYMDALKTFTTLIEK 112
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + +A+ + YQ L++ K+ + ++ + +D KAY+ G L + AIK
Sbjct: 113 QKGYSKAYFQRGRAYQGLSDYLKSEKDYEESIRLDANNPKAYYNYGTLKFLQQDYNAAIK 172
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + +DPS+ R SCY Y +A+
Sbjct: 173 YFTKSIELDPSSPMAYNDRGSCYRMQENYPKAI 205
>gi|220922062|ref|YP_002497363.1| hypothetical protein Mnod_2075 [Methylobacterium nodulans ORS 2060]
gi|219946668|gb|ACL57060.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
Length = 292
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G Y AI+ F + ++ DP A R A ++A+ DFT AI ++
Sbjct: 75 TRGAAYARAGSYNEAIADFTKAIQLDPNSASAYSNRALAYRQSGRNDSALQDFTRAINAD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ R + ALG A DLS+A+ P SA+ H RG+V AA+ D
Sbjct: 135 PNYSAAYIGRANLQRALGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQGQHRAAIGD 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A + + + Y G +L + ++ KA E + A+ ++ ++W + Y+
Sbjct: 195 FDAAIDRNPFVNAPYAARGQSLIATNQFDKAIEDYNAALNVNNKDADSWAYRGLAYEKSG 254
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
++A+E Q+ ID + A G + G+
Sbjct: 255 RRQEAMESYQRASAIDPNNAVARQGLGRVQGGM 287
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 11/252 (4%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
V+R + ++ +V G VN I+ +++ +P A RG A A
Sbjct: 31 TVSRTTATRQFAVLETDKSGATDVN-------IASLSDVIQRNPNDAAAYNTRGAAYARA 83
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
AI+DFT+AIQ +P++ A+ R A G + A+QD ++A+ +PN +
Sbjct: 84 GSYNEAIADFTKAIQLDPNSASAYSNRALAYRQSGRNDSALQDFTRAINADPNYSAAYIG 143
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
R + ++ AA DLS ++L E+ AY GL + G+++ A AI DR
Sbjct: 144 RANLQRALGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQGQHRAAIGDFDAAI--DR 201
Query: 549 N-FLEA-WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
N F+ A + Q +KA+E L ++ + + ++ RGL G+ ++A++
Sbjct: 202 NPFVNAPYAARGQSLIATNQFDKAIEDYNAALNVNNKDADSWAYRGLAYEKSGRRQEAME 261
Query: 607 DLSSGLGIDPSN 618
IDP+N
Sbjct: 262 SYQRASAIDPNN 273
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%)
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ LS ++ + + +AY G A + G Y +A KAIQLD N A+ + Y+
Sbjct: 56 IASLSDVIQRNPNDAAAYNTRGAAYARAGSYNEAIADFTKAIQLDPNSASAYSNRALAYR 115
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
++ AL+ + + D +S AY R L LG ++ A DLS + + P + E
Sbjct: 116 QSGRNDSALQDFTRAINADPNYSAAYIGRANLQRALGNYEAAYSDLSQAIRLTPESAEAY 175
Query: 623 YLRASCYHAIGEYREAV 639
+ R A G++R A+
Sbjct: 176 HARGLVRQAQGQHRAAI 192
>gi|317503054|ref|ZP_07961133.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315665827|gb|EFV05415.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 657
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 115/253 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ + G Y A F+Q +K +P E L R R R A D+ +AI+ +P
Sbjct: 65 RGIAKQSLGDYTGAEDDFNQAIKLNPYVHELLRERANNRMNLRLFSQADQDYGKAIELSP 124
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
E W R AR + QDL L+ P+ + D A + +
Sbjct: 125 DNKEYWFNRALARFYQHNIKQTRQDLYYILKRWPSLPNAYALMTETYLSANDTLQARKWV 184
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+K++ + ++++ LG +K+AE+A +AI N + + + +L
Sbjct: 185 EKTLKINPYDGNSWSILGRLNLRQNNWKRAEQAFSQAIHYIPNVVNNYTYRAMCRVNLNM 244
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A+E + + +D A++ RGLL +G AIKD S L ++P+N++ Y RA
Sbjct: 245 LRQAMEDFNKAIEMDPNSFLAHYNRGLLGMTVGDDNNAIKDFSYVLRLEPNNLQARYNRA 304
Query: 627 SCYHAIGEYREAV 639
+G+YR A+
Sbjct: 305 LLLDRVGDYRSAI 317
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 2/154 (1%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
+++GR R Q + A F++AI P+ + R R L +A++D +KA+
Sbjct: 199 SILGRLNLR--QNNWKRAEQAFSQAIHYIPNVVNNYTYRAMCRVNLNMLRQAMEDFNKAI 256
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
E +PNS + RG++ D N A++D S ++L+ N A L L +G+Y+ A
Sbjct: 257 EMDPNSFLAHYNRGLLGMTVGDDNNAIKDFSYVLRLEPNNLQARYNRALLLDRVGDYRSA 316
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+ + I NF + Y+ L + KA
Sbjct: 317 IADYSRVIAQFPNFWSGLLSRAKCYRHLGMNAKA 350
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G + + + A F Q + P R R L A+ DF +AI+ +P+
Sbjct: 202 GRLNLRQNNWKRAEQAFSQAIHYIPNVVNNYTYRAMCRVNLNMLRQAMEDFNKAIEMDPN 261
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ A RG +G+ AI+D S L EPN+ + R ++ + D+ +A+ D S
Sbjct: 262 SFLAHYNRGLLGMTVGDDNNAIKDFSYVLRLEPNNLQARYNRALLLDRVGDYRSAIADYS 321
Query: 508 ACV 510
+
Sbjct: 322 RVI 324
>gi|282165353|ref|YP_003357738.1| hypothetical protein MCP_2683 [Methanocella paludicola SANAE]
gi|282157667|dbj|BAI62755.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 358
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 115/241 (47%), Gaps = 2/241 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
KS+ +R +A++ E + A+S D+ L+ +PM + G+ + L+ A+
Sbjct: 109 PKSVQAWHSCARSLARIGESE--EALSCMDKALELEPMSADLWFYLGSYQYSLGMLDKAL 166
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+ AI P AW RG+ + G+ EA++ +++ P+ A + +G++ K
Sbjct: 167 ESYDRAIFIEPDNAAAWMGRGEVLSKEGKEAEALECYDRSIRISPDIAGAWYGKGMLFIK 226
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
++ A+ L V++ + A+ Y G L G ++A + + K +L AW
Sbjct: 227 GGKYDDALAMLDKAVEMRDGHADAWFYRGCVLELSGRIREALDCYRKVTELQPGSQAAWF 286
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
L E+A+ C + L I+ RF++A++ +GL LG +++A + ++ + I+
Sbjct: 287 MRGVLLGRLEAYEEAMPCFDKALEINPRFAEAWYHKGLFASILGNNEEAARCITRTIEIN 346
Query: 616 P 616
P
Sbjct: 347 P 347
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ + + + +S D G Q + G A+ +D+ + +P A +GRG + +
Sbjct: 134 CMDKALELEPMSADLWFYLGSYQYSLGMLDKALESYDRAIFIEPDNAAAWMGRGEVLSKE 193
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ A+ + +I+ +P AW +G G+ +A+ L KA+E AD
Sbjct: 194 GKEAEALECYDRSIRISPDIAGAWYGKGMLFIKGGKYDDALAMLDKAVEMRDGHADAWFY 253
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG V A++ +L +++A+ G+ L + Y++A KA++++
Sbjct: 254 RGCVLELSGRIREALDCYRKVTELQPGSQAAWFMRGVLLGRLEAYEEAMPCFDKALEINP 313
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
F EAW H F L N+E+A C+ + + I+ F
Sbjct: 314 RFAEAWYHKGLFASILGNNEEAARCITRTIEINPDF 349
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 126/328 (38%), Gaps = 68/328 (20%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
I + L +G+ G+ A +I +FD + D Y +A +G + + A S F
Sbjct: 8 IEAEAALEKGLEMAGAGRMADSIVLFDHAIGLDRDYGDAYNCKGLVLTELKRFDQAFSCF 67
Query: 439 TEA----------------------------------IQSNPSAGEAWKRRGQARAALGE 464
A ++ +P + +AW ++ A +GE
Sbjct: 68 ERALTLQPQNPKFWYNKSILFRELGMYEDEAGACLMSLKFDPKSVQAWHSCARSLARIGE 127
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
S EA+ + KALE EP SAD+ G + + A+E + ++ +N +A+ G
Sbjct: 128 SEEALSCMDKALELEPMSADLWFYLGSYQYSLGMLDKALESYDRAIFIEPDNAAAWMGRG 187
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAW----------------------------GH 556
LS G+ +A E + ++I++ + AW GH
Sbjct: 188 EVLSKEGKEAEALECYDRSIRISPDIAGAWYGKGMLFIKGGKYDDALAMLDKAVEMRDGH 247
Query: 557 L-TQFYQDL-----ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
FY+ +AL+C ++V + A+ +RG+LL L +++A+
Sbjct: 248 ADAWFYRGCVLELSGRIREALDCYRKVTELQPGSQAAWFMRGVLLGRLEAYEEAMPCFDK 307
Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREA 638
L I+P E Y + +G EA
Sbjct: 308 ALEINPRFAEAWYHKGLFASILGNNEEA 335
>gi|218781266|ref|YP_002432584.1| hypothetical protein Dalk_3428 [Desulfatibacillum alkenivorans
AK-01]
gi|218762650|gb|ACL05116.1| Tetratricopeptide TPR_2 repeat protein [Desulfatibacillum
alkenivorans AK-01]
Length = 271
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G+Y A+ FD+ + P I RG A ++E AI D+ +AI +
Sbjct: 103 NRGTLYWVLGRYDEALQDFDKAVDMQPDSALNYINRGNVYADMGDVERAIEDYNQAITLD 162
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDFNAAVE 504
P+ G A+ RG A ++L +AI DL KA+ F L +RG++ + KD+N AVE
Sbjct: 163 PNNGLAYSNRGLAWSSLKRFDQAIPDLDKAIAFGHEGVYKSLMKRGVIRYGTKDYNGAVE 222
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
D S +K+ AY + GLA + E +KA+ A+ L +
Sbjct: 223 DFSRVIKMHPGFTEAYYFRGLAYQQLNEAEKAQTDLQTAMDLQK 266
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 23/194 (11%)
Query: 433 AAISDFTEAIQSNPSAGE----AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
AAI +T ++ N ++ E A RG LG EA+QD KA++ +P+SA
Sbjct: 78 AAIEQYTRYLEMNQNSPEYAAPALNNRGTLYWVLGRYDEALQDFDKAVDMQPDSALNYIN 137
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG V D A+ED + + LD N AY+ GLA SS+ + +A KAI
Sbjct: 138 RGNVYADMGDVERAIEDYNQAITLDPNNGLAYSNRGLAWSSLKRFDQAIPDLDKAI---- 193
Query: 549 NFLEAWGHLTQFYQDLA----------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
A+GH Y+ L + A+E +V+ + F++AY+ RGL L
Sbjct: 194 ----AFGH-EGVYKSLMKRGVIRYGTKDYNGAVEDFSRVIKMHPGFTEAYYFRGLAYQQL 248
Query: 599 GQHKKAIKDLSSGL 612
+ +KA DL + +
Sbjct: 249 NEAEKAQTDLQTAM 262
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 9/225 (4%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE----ALIGRGTA 424
C + +K I R I ++G++ +AI + + L+ + PE AL RGT
Sbjct: 48 CASGPAKDGPIPGASYFDRAIFSESKGRHLAAIEQYTRYLEMNQNSPEYAAPALNNRGTL 107
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ A+ DF +A+ P + + RG A +G+ AI+D ++A+ +PN+
Sbjct: 108 YWVLGRYDEALQDFDKAVDMQPDSALNYINRGNVYADMGDVERAIEDYNQAITLDPNNGL 167
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL---GLALSSIGEYKKAEEAHL 541
RG+ K F+ A+ DL + E Y L G+ +Y A E
Sbjct: 168 AYSNRGLAWSSLKRFDQAIPDLDKAIAFGHE--GVYKSLMKRGVIRYGTKDYNGAVEDFS 225
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
+ I++ F EA+ YQ L +EKA LQ + + K K
Sbjct: 226 RVIKMHPGFTEAYYFRGLAYQQLNEAEKAQTDLQTAMDLQKALEK 270
>gi|384209475|ref|YP_005595195.1| hypothetical protein Bint_1999 [Brachyspira intermedia PWS/A]
gi|343387125|gb|AEM22615.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 664
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 37/289 (12%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALI-------------------------- 419
SRG+A+ G Y AI F++ L+ D + +A
Sbjct: 114 SRGVAKYGLGLYEDAIDNFNKTLELDSDFKDAYFIRALSYAKIDKHKEAVDDFNTLLIEY 173
Query: 420 ---------GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
RG ++ LE AI DFT AI P + R + L AI
Sbjct: 174 NEINYIYYYYRGLSKYNLNLLEEAIEDFTIAIDYCPDESYIYYERALVYSNLNMFKNAID 233
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D +KA+E D + R + FK +++N A+ED + ++L+ ++ A GL ++
Sbjct: 234 DYTKAIELNEMDVDSYYNRALTYFKLEEYNKAIEDYNKVLELNPDDTEAVYNKGLCKQNL 293
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G +++A E I D F+ L Y +L E+A++ + + ++ AY+
Sbjct: 294 GLFEEAIEDFNSIIDSDNEFV--CYSLGICYLELKRYEEAIDYFDVFIKFNSCYADAYYY 351
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
RG L +++AI+D + L +D +I+ Y RA + Y EA+
Sbjct: 352 RGNAKFDLEHYEEAIEDYNKTLELDNDHIDAYYERAMAKINLNLYDEAM 400
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 130/299 (43%), Gaps = 17/299 (5%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFR-----------LSRGIAQVNEGKYASAISI 403
L EA NK C + + DF S GI + +Y AI
Sbjct: 275 LNPDDTEAVYNKGLCKQNLGLFEEAIEDFNSIIDSDNEFVCYSLGICYLELKRYEEAIDY 334
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
FD +K + Y +A RG A+ E AI D+ + ++ + +A+ R A+ L
Sbjct: 335 FDVFIKFNSCYADAYYYRGNAKFDLEHYEEAIEDYNKTLELDNDHIDAYYERAMAKINLN 394
Query: 464 ESVEAIQDLSKAL---EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
EA++D +AL E + + A + + +N K+++ A+++ + ++L + Y
Sbjct: 395 LYDEAMKDFDEALYDAESDSDRAYLYTLKAALNEISKNYDEAIDNYTKAIELGDD---CY 451
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
+A + G K++ + KAI LD + E + + DL E+A+ + + +
Sbjct: 452 CKRAIAKHNAGLIKESINDYNKAIDLDPDNYEIYSYKGNAELDLYLYEEAIRDFDKAIEL 511
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + +AY+ RG+ L + +A +D + + ++ + CY + EY EA+
Sbjct: 512 NPNYDEAYYNRGIANEALKNYDEAFRDYQTTIKLNKEHDYAFNNLGGCYVRLKEYDEAL 570
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R A+ ++ +I+D+ +AI +P E + +G A L EAI+D KA+E P
Sbjct: 454 RAIAKHNAGLIKESINDYNKAIDLDPDNYEIYSYKGNAELDLYLYEEAIRDFDKAIELNP 513
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N + + RGI N K+++ A D +KL+KE+ A+ LG + EY +A E
Sbjct: 514 NYDEAYYNRGIANEALKNYDEAFRDYQTTIKLNKEHDYAFNNLGGCYVRLKEYDEALENF 573
Query: 541 LKAIQLD 547
KA++++
Sbjct: 574 YKALEIN 580
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 10/217 (4%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKE-----DPMYPEALIGRGTARAFQRELEAAI 435
+D R +A++N Y A+ FD+ L + D Y L + + + AI
Sbjct: 380 IDAYYERAMAKINLNLYDEAMKDFDEALYDAESDSDRAYLYTL--KAALNEISKNYDEAI 437
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
++T+AI+ + + +R A+ G E+I D +KA++ +P++ +I +G
Sbjct: 438 DNYTKAIEL---GDDCYCKRAIAKHNAGLIKESINDYNKAIDLDPDNYEIYSYKGNAELD 494
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ A+ D ++L+ AY G+A ++ Y +A + I+L++ A+
Sbjct: 495 LYLYEEAIRDFDKAIELNPNYDEAYYNRGIANEALKNYDEAFRDYQTTIKLNKEHDYAFN 554
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
+L Y L ++ALE + L I+ S Y+ G
Sbjct: 555 NLGGCYVRLKEYDEALENFYKALEINSELSLPYNNIG 591
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
S+ +++KAI L +YEI A L L++ IRD DKA++L+P +AY
Sbjct: 467 SINDYNKAI----DLDPDNYEIYSYKGNAEL--DLYLYEEAIRDFDKAIELNPNYDEAYY 520
Query: 108 LKGCAFSALGRKEEALSVWE 127
+G A AL +EA ++
Sbjct: 521 NRGIANEALKNYDEAFRDYQ 540
>gi|365899853|ref|ZP_09437735.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365419376|emb|CCE10277.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 183
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
+L RG + +G AI +++ DP A +GRG A ++E AISD+ EAI+
Sbjct: 18 KLCRGYGNLAKGSVEDAIRDLSEVIAVDPSSASAFLGRGRAYRMKKEFNRAISDYDEAIR 77
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
NP A+ RG A + AIQDL A+ P+ ++ RG+ + + ++ A+
Sbjct: 78 LNPKDASAFNNRGAAMIYVQNYERAIQDLDDAVRLNPSYSEAFMNRGLAHARLRESERAI 137
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
D + +++D N A+ G+A ++ G+ +A+
Sbjct: 138 ADFTEAIRIDPRNAVAFHNRGVAYAAKGDGARAK 171
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 91/174 (52%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
++D+ E+I+ P++ + RG A G +AI+DLS+ + +P+SA RG
Sbjct: 1 MADYKESIRIAPNSASSKLCRGYGNLAKGSVEDAIRDLSEVIAVDPSSASAFLGRGRAYR 60
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K+FN A+ D ++L+ ++ SA+ G A+ + Y++A + A++L+ ++ EA+
Sbjct: 61 MKKEFNRAISDYDEAIRLNPKDASAFNNRGAAMIYVQNYERAIQDLDDAVRLNPSYSEAF 120
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + L SE+A+ + + ID R + A+H RG+ G +A D
Sbjct: 121 MNRGLAHARLRESERAIADFTEAIRIDPRNAVAFHNRGVAYAAKGDGARAKADF 174
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + Y AI D ++ +P Y EA + RG A A RE E AI+DFTEAI+ +
Sbjct: 88 NRGAAMIYVQNYERAIQDLDDAVRLNPSYSEAFMNRGLAHARLRESERAIADFTEAIRID 147
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKA 475
P A+ RG A AA G+ A D +A
Sbjct: 148 PRNAVAFHNRGVAYAAKGDGARAKADFDQA 177
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
+ D +++ PNSA RG N A+ DLS + +D + SA+ G A
Sbjct: 1 MADYKESIRIAPNSASSKLCRGYGNLAKGSVEDAIRDLSEVIAVDPSSASAFLGRGRAYR 60
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
E+ +A + +AI+L+ A+ + + N E+A++ L + ++ +S+A+
Sbjct: 61 MKKEFNRAISDYDEAIRLNPKDASAFNNRGAAMIYVQNYERAIQDLDDAVRLNPSYSEAF 120
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
RGL L + ++AI D + + IDP N + R Y A G+
Sbjct: 121 MNRGLAHARLRESERAIADFTEAIRIDPRNAVAFHNRGVAYAAKGD 166
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 11 YRLNKT-HKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSL--LAQSY 67
YR+ K ++ I + DE +R++ ASA R A + ++N+ +AI+ LD L SY
Sbjct: 59 YRMKKEFNRAISDYDEAIRLNPKDASAFNNR--GAAMIYVQNYERAIQDLDDAVRLNPSY 116
Query: 68 EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALG 117
+ NR +++L + I D +A+++DP A+ +G A++A G
Sbjct: 117 S-EAFMNRGLAHARLRESERAIADFTEAIRIDPRNAVAFHNRGVAYAAKG 165
>gi|220907964|ref|YP_002483275.1| hypothetical protein Cyan7425_2558 [Cyanothece sp. PCC 7425]
gi|219864575|gb|ACL44914.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 210
Score = 82.8 bits (203), Expect = 5e-13, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
F+QIL+ P E +G A +LE AI F+EA++ + +A + + RG A + LG
Sbjct: 49 FNQILQTQPQTAEDYYDQGLALQGAGDLEGAIRSFSEAVKLSGTA-DNYFARGLALSDLG 107
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
+ +AI D + A+ +PN A + RG +D A+ DLS +KLD +AY
Sbjct: 108 DHKQAIADYNVAIRLDPNFAAAFYNRGTARLALQDQTGAIADLSQAIKLDSSFVAAYYSR 167
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
GLA + G K A + + A++L A+ +L+Q YQ N
Sbjct: 168 GLAHYNAGNEKLARQDYNMAVRLSPGMTSAYYNLSQQYQTGGN 210
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
Q+ ++ L+ +P +A+ +++G+ D A+ S VKL + Y GLALS
Sbjct: 47 QEFNQILQTQPQTAEDYYDQGLALQGAGDLEGAIRSFSEAVKLSGTADN-YFARGLALSD 105
Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+G++K+A + AI+LD NF A+ + L + A+ L Q + +D F AY+
Sbjct: 106 LGDHKQAIADYNVAIRLDPNFAAAFYNRGTARLALQDQTGAIADLSQAIKLDSSFVAAYY 165
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
RGL + G K A +D + + + P Y + Y G
Sbjct: 166 SRGLAHYNAGNEKLARQDYNMAVRLSPGMTSAYYNLSQQYQTGG 209
Score = 52.4 bits (124), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S + D +RG+A + G + AI+ ++ ++ DP + A RGTAR ++ AI+D
Sbjct: 90 SGTADNYFARGLALSDLGDHKQAIADYNVAIRLDPNFAAAFYNRGTARLALQDQTGAIAD 149
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
++AI+ + S A+ RG A G A QD + A+ P
Sbjct: 150 LSQAIKLDSSFVAAYYSRGLAHYNAGNEKLARQDYNMAVRLSP 192
>gi|172035397|ref|YP_001801898.1| hypothetical protein cce_0481 [Cyanothece sp. ATCC 51142]
gi|354555489|ref|ZP_08974790.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
ATCC 51472]
gi|171696851|gb|ACB49832.1| unknown [Cyanothece sp. ATCC 51142]
gi|353552548|gb|EHC21943.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
ATCC 51472]
Length = 252
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GI + +G Y +A+ F+Q+L ++P A RG A + + E A++DFT+ ++
Sbjct: 67 VQQGIEKSRQGNYEAAVDDFNQVLAQNPQDINAYFNRGFAYSSLGQFEQALADFTKVLKL 126
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P +A+ RG LGE +AI D KAL+ PN A + G+ + A
Sbjct: 127 DPQMVQAYVNRGNVYLQLGEDEKAISDYEKALKINPNDAFAQNNLGLAHLNSGSPELAKI 186
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
D + V +D AY GLAL +GE KKA
Sbjct: 187 DFTQAVTIDPLYGEAYYNRGLALLDLGETKKA 218
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 37/211 (17%)
Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
+S+I I +L D + ++ +G ++ Q EAA+ DF + + NP A+ RG
Sbjct: 49 SSSIPIESSLLTVDTV---EMVQQGIEKSRQGNYEAAVDDFNQVLAQNPQDINAYFNRGF 105
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
A ++LG+ +A+ D +K L+ +P RG V + + A+ D +K++ +
Sbjct: 106 AYSSLGQFEQALADFTKVLKLDPQMVQAYVNRGNVYLQLGEDEKAISDYEKALKINPNDA 165
Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
A LGLA HL +LA + Q
Sbjct: 166 FAQNNLGLA-----------------------------HLNSGSPELAKID-----FTQA 191
Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ ID + +AY+ RGL L LG+ KKAI D
Sbjct: 192 VTIDPLYGEAYYNRGLALLDLGETKKAIADF 222
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 51 NWSKAIRILDSLLAQSYE-IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
N+ A+ + +LAQ+ + I NR F YS L + + D K L+LDP ++QAY+ +
Sbjct: 78 NYEAAVDDFNQVLAQNPQDINAYFNRGFAYSSLGQFEQALADFTKVLKLDPQMVQAYVNR 137
Query: 110 GCAFSALGRKEEALSVWEKG 129
G + LG E+A+S +EK
Sbjct: 138 GNVYLQLGEDEKAISDYEKA 157
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++GI + ++ AAV+D + + + ++ +AY G A SS+G++++A K ++LD
Sbjct: 68 QQGIEKSRQGNYEAAVDDFNQVLAQNPQDINAYFNRGFAYSSLGQFEQALADFTKVLKLD 127
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
++A+ + Y L EKA+ ++ L I+ + A + GL G + A D
Sbjct: 128 PQMVQAYVNRGNVYLQLGEDEKAISDYEKALKINPNDAFAQNNLGLAHLNSGSPELAKID 187
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + IDP E Y R +GE ++A+
Sbjct: 188 FTQAVTIDPLYGEAYYNRGLALLDLGETKKAI 219
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
++ +RG A + G++ A++ F ++LK DP +A + RG E E AISD+ +
Sbjct: 97 INAYFNRGFAYSSLGQFEQALADFTKVLKLDPQMVQAYVNRGNVYLQLGEDEKAISDYEK 156
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
A++ NP+ A G A G A D ++A+ +P + + RG+ +
Sbjct: 157 ALKINPNDAFAQNNLGLAHLNSGSPELAKIDFTQAVTIDPLYGEAYYNRGLALLDLGETK 216
Query: 501 AAVEDLSACVKLDKE 515
A+ D ++ +E
Sbjct: 217 KAIADFQKAAEIWEE 231
>gi|425470311|ref|ZP_18849181.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9701]
gi|389884127|emb|CCI35562.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9701]
Length = 317
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 5/241 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ + + L GI Q+ G Y A+ F+Q L+ + A R + ++ A
Sbjct: 42 AQSVHLSYWLRSGIEQLEAGNYPQALQDFNQSLERENNLALAYSNRCLTEIYLQDYLHAW 101
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D T ++Q A+ RG A LG+ +A+ D ++ + +P + RG+V
Sbjct: 102 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYPQALTDYNQTIRLKPTYYQAYYNRGLVQAA 161
Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K++ A+ D + ++ + + Y GL+ ++ + A+ +A+QL++N
Sbjct: 162 MKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLSHLALHNFTSAKADFNQALQLNKNN 221
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ +L L E+++ L + + ID ++ AY RGLL H LG ++ A+ DL+
Sbjct: 222 ASAYYNLACTAHQLGEYERSIADLNRAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 281
Query: 611 G 611
G
Sbjct: 282 G 282
>gi|428204802|ref|YP_007100428.1| hypothetical protein Chro_5686 [Chroococcidiopsis thermalis PCC
7203]
gi|428012921|gb|AFY91037.1| Tetratricopeptide TPR_1 repeat-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 243
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 82/163 (50%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L RG + + + + AI DF ++ NPS EA+ RG RA LG A+ D + AL
Sbjct: 49 LFNRGVEKTERGDFQGAIEDFDGVVRLNPSFIEAYCNRGFVRAELGNYKAAMADFNSALR 108
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P+ AD ++RG V + +F+ A+ D +A ++ D AY GLA S IG + A
Sbjct: 109 INPHHADAYNKRGTVLAQRGNFSEAITDFNAALRYDVNFADAYYNRGLAHSGIGNAQAAI 168
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
+ +AI+L + EA+G+ L + A+ LQQ I
Sbjct: 169 ADYDRAIRLQPDMAEAYGNRGTVRYHLGDRSGAIADLQQAAQI 211
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 75/148 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ + G + AI FD +++ +P + EA RG RA +AA++DF A++
Sbjct: 50 FNRGVEKTERGDFQGAIEDFDGVVRLNPSFIEAYCNRGFVRAELGNYKAAMADFNSALRI 109
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP +A+ +RG A G EAI D + AL ++ N AD + RG+ + + AA+
Sbjct: 110 NPHHADAYNKRGTVLAQRGNFSEAITDFNAALRYDVNFADAYYNRGLAHSGIGNAQAAIA 169
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGE 532
D ++L + AY G +G+
Sbjct: 170 DYDRAIRLQPDMAEAYGNRGTVRYHLGD 197
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + G Y +A++ F+ L+ +P + +A RGT A + AI+DF A++ +
Sbjct: 85 NRGFVRAELGNYKAAMADFNSALRINPHHADAYNKRGTVLAQRGNFSEAITDFNAALRYD 144
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ +A+ RG A + +G + AI D +A+ +P+ A+ RG V + D + A+ D
Sbjct: 145 VNFADAYYNRGLAHSGIGNAQAAIADYDRAIRLQPDMAEAYGNRGTVRYHLGDRSGAIAD 204
Query: 506 LSACVKL------DKENKSAYTYL 523
L ++ + ++ A T+L
Sbjct: 205 LQQAAQIFSAQGNEPAHQQALTFL 228
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 66/154 (42%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L RG+ + DF A+ED V+L+ AY G + +G YK A A++
Sbjct: 49 LFNRGVEKTERGDFQGAIEDFDGVVRLNPSFIEAYCNRGFVRAELGNYKAAMADFNSALR 108
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ + +A+ N +A+ L D F+ AY+ RGL G+G + AI
Sbjct: 109 INPHHADAYNKRGTVLAQRGNFSEAITDFNAALRYDVNFADAYYNRGLAHSGIGNAQAAI 168
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + + P E R + + +G+ A+
Sbjct: 169 ADYDRAIRLQPDMAEAYGNRGTVRYHLGDRSGAI 202
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG + G+ AI+D + P+ + RG V + ++ AA+ D ++ ++++
Sbjct: 52 RGVEKTERGDFQGAIEDFDGVVRLNPSFIEAYCNRGFVRAELGNYKAAMADFNSALRINP 111
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ AY G L+ G + +A A++ D NF +A+ + + + N++ A+
Sbjct: 112 HHADAYNKRGTVLAQRGNFSEAITDFNAALRYDVNFADAYYNRGLAHSGIGNAQAAIADY 171
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS------SGLGIDPSNIECL 622
+ + + ++AY RG + + LG AI DL S G +P++ + L
Sbjct: 172 DRAIRLQPDMAEAYGNRGTVRYHLGDRSGAIADLQQAAQIFSAQGNEPAHQQAL 225
>gi|427724351|ref|YP_007071628.1| hypothetical protein Lepto7376_2520 [Leptolyngbya sp. PCC 7376]
gi|427356071|gb|AFY38794.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 324
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 1/206 (0%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ + T AI+ +PS +A+ +RG +G + EAI D ++AL+ + N +RG++
Sbjct: 53 ALFELTTAIRFSPSFADAYYQRGFVHEKMGNTTEAIADYNRALQRDANHEVAYLQRGMLY 112
Query: 494 FKFKDFNAAVEDLSACVK-LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
K + AVED + ++ N A G A +SIGE A + AI L+ F E
Sbjct: 113 AKAGETVKAVEDFDRILTVINPNNIFALVARGQAFASIGESVLALQDFTGAINLNNRFAE 172
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
A+ YQ L N +A+ + ID Y RG + + K+AI D + L
Sbjct: 173 AYVERGLVYQRLNNVVQAVADYSMAVEIDPSLVTPYLQRGAIYRQGNRIKEAIADYNFAL 232
Query: 613 GIDPSNIECLYLRASCYHAIGEYREA 638
DP N YLR G+Y+ A
Sbjct: 233 QNDPENATAYYLRGVAVEQQGQYQAA 258
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 3/201 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKE-DPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
L RG+ G+ A+ FD+IL +P AL+ RG A A E A+ DFT AI
Sbjct: 106 LQRGMLYAKAGETVKAVEDFDRILTVINPNNIFALVARGQAFASIGESVLALQDFTGAIN 165
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
N EA+ RG L V+A+ D S A+E +P+ +RG + + A+
Sbjct: 166 LNNRFAEAYVERGLVYQRLNNVVQAVADYSMAVEIDPSLVTPYLQRGAIYRQGNRIKEAI 225
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + ++ D EN +AY G+A+ G+Y+ A + +AI+ + A+G+ Y
Sbjct: 226 ADYNFALQNDPENATAYYLRGVAVEQQGQYQAAFTDYSRAIEFNDKIAPAYGNRANIYAQ 285
Query: 564 LANSEKALECLQQV--LYIDK 582
A + QQ L++D+
Sbjct: 286 RGEYAAAKQDYQQAAQLFLDQ 306
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 1/252 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ Q G Y A+ ++ P + +A RG AI+D+ A+Q + +
Sbjct: 41 GVNQSRLGNYGDALFELTTAIRFSPSFADAYYQRGFVHEKMGNTTEAIADYNRALQRDAN 100
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ +RG A GE+V+A++D + L PN+ L RG + A++D
Sbjct: 101 HEVAYLQRGMLYAKAGETVKAVEDFDRILTVINPNNIFALVARGQAFASIGESVLALQDF 160
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ + L+ AY GL + +A + A+++D + + + Y+
Sbjct: 161 TGAINLNNRFAEAYVERGLVYQRLNNVVQAVADYSMAVEIDPSLVTPYLQRGAIYRQGNR 220
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
++A+ L D + AY+LRG+ + GQ++ A D S + + RA
Sbjct: 221 IKEAIADYNFALQNDPENATAYYLRGVAVEQQGQYQAAFTDYSRAIEFNDKIAPAYGNRA 280
Query: 627 SCYHAIGEYREA 638
+ Y GEY A
Sbjct: 281 NIYAQRGEYAAA 292
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG +A+ +L+ A+ F P+ AD ++RG V+ K + A+ D + ++ D ++ AY
Sbjct: 47 LGNYGDALFELTTAIRFSPSFADAYYQRGFVHEKMGNTTEAIADYNRALQRDANHEVAYL 106
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQ-LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
G+ + GE KA E + + ++ N + A Q + + S AL+ + +
Sbjct: 107 QRGMLYAKAGETVKAVEDFDRILTVINPNNIFALVARGQAFASIGESVLALQDFTGAINL 166
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ RF++AY RGL+ L +A+ D S + IDPS + R + Y +EA+
Sbjct: 167 NNRFAEAYVERGLVYQRLNNVVQAVADYSMAVEIDPSLVTPYLQRGAIYRQGNRIKEAI 225
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
Y G+ S +G Y A AI+ +F +A+ ++ + N+ +A+ + L D
Sbjct: 39 YTGVNQSRLGNYGDALFELTTAIRFSPSFADAYYQRGFVHEKMGNTTEAIADYNRALQRD 98
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG-IDPSNIECLYLRASCYHAIGE 634
AY RG+L G+ KA++D L I+P+NI L R + +IGE
Sbjct: 99 ANHEVAYLQRGMLYAKAGETVKAVEDFDRILTVINPNNIFALVARGQAFASIGE 152
>gi|391232538|ref|ZP_10268744.1| tetratricopeptide repeat protein [Opitutaceae bacterium TAV1]
gi|391222199|gb|EIQ00620.1| tetratricopeptide repeat protein [Opitutaceae bacterium TAV1]
Length = 706
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 34/247 (13%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G +A AI+ +D+ LK P +A RG + + +AA+ DF+ I P+ EAW
Sbjct: 49 KGNHAGAIAAYDRALKLLPEEADAWYARGESHLALVKPDAALGDFSHVITLRPAMAEAWA 108
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RGQA A+ + EA +D ++ALE +P A I +RG ++ + +AA+ D + L
Sbjct: 109 ARGQAYLAMAKPDEAFRDFTQALELDPKQAGIREQRGRISLDRGELDAALADFDGALALS 168
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
GLAL+ +G + + +++ A+
Sbjct: 169 P---------GLALAHLGR-------------------------ARVFHARGDTQGAIAA 194
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + D + A+ R +L + +A +D+ S L + P + RA + A G
Sbjct: 195 YSEAIAADPLLADAFRGRTAMLLEEKRFGEAARDIDSALVLAPRDASLWLARARVWRATG 254
Query: 634 EYREAVI 640
A++
Sbjct: 255 FPENALV 261
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 18/243 (7%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF--QRELEAAISDFTE 440
R RG ++ G+ +A++ FD L P A +GR AR F + + + AI+ ++E
Sbjct: 140 IREQRGRISLDRGELDAALADFDGALALSPGLALAHLGR--ARVFHARGDTQGAIAAYSE 197
Query: 441 AIQSNPSAGEAWKRRGQARAALGESV--EAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
AI ++P +A+ RG+ L E EA +D+ AL P A + R V ++
Sbjct: 198 AIAADPLLADAF--RGRTAMLLEEKRFGEAARDIDSALVLAPRDASLWLARARV-WRATG 254
Query: 499 F--NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ---LDRNFLEA 553
F NA V D++ ++L N +A LAL G+ A +L A++ D NF A
Sbjct: 255 FPENALV-DIARSLELSPRNTAALVEQALALEDTGDTAAALR-NLDAVRKAAPDENF--A 310
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
W + Y L + L + + ++A RG L + A+ D + L
Sbjct: 311 WLQTARIYGKLRRVAEIPPLLTPFIEAHPQDAEALSTRGSAWLDLDRLDSAVADFRAALA 370
Query: 614 IDP 616
I+P
Sbjct: 371 INP 373
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P I RG A LE A++ + EA++++P +A K G L EA + LS
Sbjct: 477 PVVQINRGEALHRLGRLEEAVTAYQEALRTDPGLADARKDLGLLLMELNRLDEADEQLSD 536
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
A + PNS D + RG+V D+ AA++ + D + K +Y +L L L+
Sbjct: 537 AGKLAPNSGDAPNLRGLVRLISADYPAAIDRFQEAID-DYKTKQSYVHLSLYLA 589
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 91/235 (38%), Gaps = 20/235 (8%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + K +A+ F ++ P EA RG A + + A DFT+A++ +
Sbjct: 75 ARGESHLALVKPDAALGDFSHVITLRPAMAEAWAARGQAYLAMAKPDEAFRDFTQALELD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFKD 498
P ++RG+ GE A+ D AL P A + H RG D
Sbjct: 135 PKQAGIREQRGRISLDRGELDAALADFDGALALSPGLALAHLGRARVFHARG-------D 187
Query: 499 FNAAVEDLSACVKLDKENKSAY---TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
A+ S + D A+ T + L GE + ++ L D + W
Sbjct: 188 TQGAIAAYSEAIAADPLLADAFRGRTAMLLEEKRFGEAARDIDSALVLAPRDASL---WL 244
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ ++ E AL + + L + R + A + L L G A+++L +
Sbjct: 245 ARARVWRATGFPENALVDIARSLELSPRNTAALVEQALALEDTGDTAAALRNLDA 299
>gi|425434175|ref|ZP_18814646.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9432]
gi|389677169|emb|CCH93904.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9432]
Length = 736
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 122/245 (49%), Gaps = 1/245 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 376 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 435
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A L ++ EA++ + L P ++ + + + + ++AA + L + +
Sbjct: 436 RGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQ 495
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ ++ + W L ALE
Sbjct: 496 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 555
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + +FS+AY+ +G++L LG++ +A++ + + + + + + H +
Sbjct: 556 SKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLER 615
Query: 635 YREAV 639
++EA+
Sbjct: 616 FQEAI 620
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 117/246 (47%), Gaps = 3/246 (1%)
Query: 396 KYASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 410 RYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQG 469
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 470 KADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 529
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N + G +L + + A E++ KA Q + F +A+ Q L + +ALE
Sbjct: 530 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAF 589
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY-LRASCYHAIG 633
Q + + +A+ +G LLH L + ++AI I E + +CY +G
Sbjct: 590 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYR-LG 648
Query: 634 EYREAV 639
+Y +A+
Sbjct: 649 DYSQAI 654
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 110/255 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A K A+ F+++L +P +A G+ ++ AA + +
Sbjct: 434 LGRGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTF 493
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 494 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALE 553
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
S + + + AY G+ L +G +A EA +A + + N+ +AW + L
Sbjct: 554 SYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQL 613
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ ++ I R S+ + G + LG + +AI + N E
Sbjct: 614 ERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKS 673
Query: 625 RASCYHAIGEYREAV 639
+ + +G+Y A+
Sbjct: 674 LGNSWFKLGQYERAI 688
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G + N Y A+ +DQ L + +G + ++ A+ +++A Q NP
Sbjct: 504 KGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNP 563
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ +G LG + EA++ ++A + N +G + + + F A+
Sbjct: 564 QFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASY 623
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + +G A +G+Y +A A+ +AIQ ++ E W L + L
Sbjct: 624 EKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQ 683
Query: 567 SEKALECLQQVL 578
E+A++ Q+ L
Sbjct: 684 YERAIQAYQESL 695
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G L EAI KA +++ G
Sbjct: 585 ALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAC 644
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D++ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 645 YRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSN 700
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 8/193 (4%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ ++ + F T+ +K+
Sbjct: 545 LNKINNALESYSKAGQFNPQFSQAYYSQGII------LQKLGRNSEALEAF--TQATKAN 596
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI+
Sbjct: 597 SNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITA 656
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 657 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDQEVQTQKQLAETRWQ 716
Query: 498 DFNAAVEDLSACV 510
+ + ++ + V
Sbjct: 717 ELQQSPQNPTPKV 729
>gi|408531235|emb|CCK29409.1| hypothetical protein BN159_5030 [Streptomyces davawensis JCM 4913]
Length = 1038
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 1/245 (0%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G++ ++ D+++ DPM A RG +R + A+SDF A+ A R
Sbjct: 571 GRHEDVVAGCDRVIALDPMQARAWANRGQSRHALGDSTGALSDFDRALSIEGDYLWALVR 630
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
R + + G E+ DL +A++ P SA + ERG F AV +L +L
Sbjct: 631 RSRVYRSQGRLDESFADLDRAVDLAPASAWLASERGDAYRLVDRFEEAVRELGRACELVP 690
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ SA+ G AL+ +G +++A A+ +AI+L+ ++ A H +L + E L
Sbjct: 691 DYASAHAGRGYALAELGRHEEARAAYDRAIELNADYPWALVHRASLKGELGDQEGMFTDL 750
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + ID A R G+G H +A+ D+ + S+ E L LRA + +G
Sbjct: 751 DRAVAIDGS-GWAIVRRAAAHQGVGHHAEALADVGRAEELGRSDPELLVLRAGILYRLGR 809
Query: 635 YREAV 639
EAV
Sbjct: 810 TVEAV 814
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+ GE AI + ++AL +P SA + H+RG+ D AA+ DL L
Sbjct: 495 RGRELTKEGEFARAIDECNRALALDPQSAWVFHDRGVALAAQGDVTAALADLEQAEALRP 554
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
++ L +G ++ + I LD AW + Q L +S AL
Sbjct: 555 DDVRILINQQPILQMLGRHEDVVAGCDRVIALDPMQARAWANRGQSRHALGDSTGALSDF 614
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ L I+ + A R + G+ ++ DL + + P++ R Y +
Sbjct: 615 DRALSIEGDYLWALVRRSRVYRSQGRLDESFADLDRAVDLAPASAWLASERGDAYRLVDR 674
Query: 635 YREAV 639
+ EAV
Sbjct: 675 FEEAV 679
>gi|300726435|ref|ZP_07059883.1| tetratricopeptide repeat protein [Prevotella bryantii B14]
gi|299776283|gb|EFI72845.1| tetratricopeptide repeat protein [Prevotella bryantii B14]
Length = 666
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 124/307 (40%), Gaps = 45/307 (14%)
Query: 367 KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
++ + RI + I++D++ Y AI F+ + P E RG A+
Sbjct: 20 QYNIDRIQVAGRIALDYK-----------DYVLAIQHFNICVSYKPYLYEPWYYRGVAKF 68
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ + A D TEAI+ NP + W R +R + EAI D +AL+ +PN+ +
Sbjct: 69 YLDDFSGAEMDETEAIKLNPYISDIWNLRALSRIKQDKFQEAISDYDQALKRDPNNRGYI 128
Query: 487 HERGIVNFKFKDFNAAVEDLSACV----------------------------------KL 512
+ K KD+++A L + V ++
Sbjct: 129 FNKAYCAVKLKDYSSAHRQLDSIVARWPQMADAYSLQTEVYLTENDTATAAKWLDKTLEI 188
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
D N A+ G S YK A EA AI + + + + +L +A+E
Sbjct: 189 DPYNGDAWAIRGRLHLSRKSYKVAFEAFSNAIHYEPKVVNNYVYRAMASVNLNKLRQAME 248
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+ + +D A++ RGLL LG +AIKD L ++P+NI+ LY RA
Sbjct: 249 DYDKAVEMDPNNFIAHYNRGLLRLTLGDDNRAIKDFDFVLRLEPNNIQALYNRALLNDKT 308
Query: 633 GEYREAV 639
G + A+
Sbjct: 309 GNLKAAI 315
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 111/247 (44%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R ++++ + K+ AIS +DQ LK DP + + ++ +A + P
Sbjct: 97 RALSRIKQDKFQEAISDYDQALKRDPNNRGYIFNKAYCAVKLKDYSSAHRQLDSIVARWP 156
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ + + ++ A + L K LE +P + D RG ++ K + A E
Sbjct: 157 QMADAYSLQTEVYLTENDTATAAKWLDKTLEIDPYNGDAWAIRGRLHLSRKSYKVAFEAF 216
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + + + + Y Y +A ++ + ++A E + KA+++D N A + L +
Sbjct: 217 SNAIHYEPKVVNNYVYRAMASVNLNKLRQAMEDYDKAVEMDPNNFIAHYNRGLLRLTLGD 276
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+A++ VL ++ +A + R LL G K AI+D S + P+ L RA
Sbjct: 277 DNRAIKDFDFVLRLEPNNIQALYNRALLNDKTGNLKAAIRDYSRVIQKFPNFWNGLLARA 336
Query: 627 SCYHAIG 633
+CY +G
Sbjct: 337 NCYRRLG 343
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 21/158 (13%)
Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
N+K TR +K I+ F L R +AQ Y AIS D ++ D A + R ++
Sbjct: 486 NEKISNTRDAK---IASSFLLQRAVAQATIHNYEEAISDLDDYIRMDSTNVLAFMQRASS 542
Query: 425 RAFQRELEA---------------AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
A EL+A D +AI + G A AA+ + +AI
Sbjct: 543 LA---ELDAYNRSQGRNSSMYTTRINDDLRQAIHLRKNNAYLLYNMGCAYAAIKDFNKAI 599
Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
S+A+ PN A+ + RG+ + D +AV+DLS
Sbjct: 600 LYFSQAIGVNPNLAEAYYNRGLAKLRCNDVGSAVKDLS 637
>gi|425451529|ref|ZP_18831350.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 7941]
gi|389767119|emb|CCI07396.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 7941]
Length = 707
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 122/245 (49%), Gaps = 1/245 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 347 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 406
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A L ++ EA++ + L P ++ + + + + ++AA + L + +
Sbjct: 407 RGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQ 466
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ ++ + W L ALE
Sbjct: 467 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 526
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + +FS+AY+ +G++L LG++ +A++ + + + + + + H +
Sbjct: 527 SKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLER 586
Query: 635 YREAV 639
++EA+
Sbjct: 587 FQEAI 591
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 396 KYASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQG 440
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 441 KADIYLELQQYSAAQKALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 500
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+N + G +L + + A E++ KA Q + F +A+ Q L + +ALE
Sbjct: 501 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAF 560
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
Q + + +A+ +G LLH L + ++AI I E + ++ +G+
Sbjct: 561 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAWYRLGD 620
Query: 635 YREAV 639
Y +A+
Sbjct: 621 YSQAI 625
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 110/255 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A K A+ F+++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 465 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
S + + + AY G+ L +G +A EA +A + + N+ +AW + L
Sbjct: 525 SYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQL 584
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
++A+ ++ I R S+ + G + LG + +AI + N E
Sbjct: 585 ERFQEAIASYEKARRISSRKSEVFIGIGNAWYRLGDYSQAITAYQQAIQRQKDNPETWKS 644
Query: 625 RASCYHAIGEYREAV 639
+ + +G+Y A+
Sbjct: 645 LGNSWFKLGQYERAI 659
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G + N Y A+ +DQ L + +G + ++ A+ +++A Q NP
Sbjct: 475 KGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNP 534
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ +G LG + EA++ ++A + N +G + + + F A+
Sbjct: 535 QFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASY 594
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + +G A +G+Y +A A+ +AIQ ++ E W L + L
Sbjct: 595 EKARRISSRKSEVFIGIGNAWYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQ 654
Query: 567 SEKALECLQQVL 578
E+A++ Q+ L
Sbjct: 655 YERAIQAYQESL 666
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G L EAI KA +++ G
Sbjct: 556 ALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAW 615
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D++ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 616 YRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSN 671
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 8/193 (4%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ ++ + F T+ +K+
Sbjct: 516 LNKINNALESYSKAGQFNPQFSQAYYSQGII------LQKLGRNSEALEAF--TQATKAN 567
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI+
Sbjct: 568 SNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAWYRLGDYSQAITA 627
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDQEVQTQKQLAETRWQ 687
Query: 498 DFNAAVEDLSACV 510
+ + ++ + V
Sbjct: 688 ELQQSPQNPTPKV 700
>gi|298492452|ref|YP_003722629.1| hypothetical protein Aazo_4041 ['Nostoc azollae' 0708]
gi|298234370|gb|ADI65506.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
Length = 280
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R++ S + +F + +G Q +G +AI+ + + + + Y A RG A
Sbjct: 51 RLTPKTSKAGEFYI-QGQNQHAKGNSQAAIAAYSKSISLNSQYAPAFKSRGLAYFDVGNK 109
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI+D+ +A++ NP+ E + RG ARA+LG+ AI D ++A+ N A + RG
Sbjct: 110 EGAIADYNQALRLNPNDAETYNNRGNARASLGDQQNAITDYNEAIRLANNYAQAYNNRGN 169
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
N A+ D + +++D+ AY G +S G+ +KA + +AI+L+ NF
Sbjct: 170 ARATQGHKNGALADYTQAIRIDQNYAVAYNNRGNTYASQGDQQKAIADYNQAIRLNPNFA 229
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYI-DKRFSK 586
A+ + + + AL+ LQ+ I DK +K
Sbjct: 230 PAFNNRGNAFAATGDKRSALQDLQRAAAILDKEGNK 265
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+AAI+ ++++I N A+K RG A +G AI D ++AL PN A+ + RG
Sbjct: 76 QAAIAAYSKSISLNSQYAPAFKSRGLAYFDVGNKEGAIADYNQALRLNPNDAETYNNRGN 135
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D A+ D + ++L AY G A ++ G A + +AI++D+N+
Sbjct: 136 ARASLGDQQNAITDYNEAIRLANNYAQAYNNRGNARATQGHKNGALADYTQAIRIDQNYA 195
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A+ + Y + +KA+ Q + ++ F+ A++ RG G + A++DL
Sbjct: 196 VAYNNRGNTYASQGDQQKAIADYNQAIRLNPNFAPAFNNRGNAFAATGDKRSALQDLQRA 255
Query: 612 LGI 614
I
Sbjct: 256 AAI 258
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 1/192 (0%)
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AGE + + GQ + A G S AI SK++ A RG+ F + A+ D +
Sbjct: 59 AGEFYIQ-GQNQHAKGNSQAAIAAYSKSISLNSQYAPAFKSRGLAYFDVGNKEGAIADYN 117
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++L+ + Y G A +S+G+ + A + +AI+L N+ +A+ + +
Sbjct: 118 QALRLNPNDAETYNNRGNARASLGDQQNAITDYNEAIRLANNYAQAYNNRGNARATQGHK 177
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
AL Q + ID+ ++ AY+ RG G +KAI D + + ++P+ R +
Sbjct: 178 NGALADYTQAIRIDQNYAVAYNNRGNTYASQGDQQKAIADYNQAIRLNPNFAPAFNNRGN 237
Query: 628 CYHAIGEYREAV 639
+ A G+ R A+
Sbjct: 238 AFAATGDKRSAL 249
>gi|145539113|ref|XP_001455251.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423050|emb|CAK87854.1| unnamed protein product [Paramecium tetraurelia]
Length = 945
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AI D +AI N ++ ++ R Q+ +G+ +A++DL K +E PN +D ++ G
Sbjct: 343 FEEAIKDLNKAININSNSQFSYYNRAQSYLKIGQKDQAMKDLEKHVEINPNHSDAYYQLG 402
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL--------ALSSIGEYKKAEEAHLK 542
+ + N A ++L+ + + AY G+ +S+G ++A + K
Sbjct: 403 FILTMLGNINQAFFYYCKAIQLNPKFQKAYANRGIDQILKVASLATSLGLKQQAFDDLNK 462
Query: 543 AIQLDRNFLEAWGH-------LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
AI+LD N ++ + L + +L N E AL+ L Q + ID + A + RGL+
Sbjct: 463 AIELDPNCSNSYYNRGFSFSILGTLFVNLGNFELALKDLNQAIQIDPNYQDALNNRGLVY 522
Query: 596 HGLGQHKKAIKDLSSGLGIDPSN 618
+ LGQ K+A+KD + + ++P+N
Sbjct: 523 NHLGQKKEALKDFNQIILLNPTN 545
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 15/225 (6%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+L+ A+ + AI P + +R + L EAI+DL+KA+ NS + R
Sbjct: 308 KLDMALHAYNRAITFCPKDEQYLNQRSELYFRLERFEEAIKDLNKAININSNSQFSYYNR 367
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
K + A++DL V+++ + AY LG L+ +G +A + KAIQL+
Sbjct: 368 AQSYLKIGQKDQAMKDLEKHVEINPNHSDAYYQLGFILTMLGNINQAFFYYCKAIQLNPK 427
Query: 550 FLEAWGH--------LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL-------L 594
F +A+ + + L ++A + L + + +D S +Y+ RG L
Sbjct: 428 FQKAYANRGIDQILKVASLATSLGLKQQAFDDLNKAIELDPNCSNSYYNRGFSFSILGTL 487
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG + A+KDL+ + IDP+ + L R Y+ +G+ +EA+
Sbjct: 488 FVNLGNFELALKDLNQAIQIDPNYQDALNNRGLVYNHLGQKKEAL 532
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 111/248 (44%), Gaps = 8/248 (3%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+ K A++ + + +P + + I R Q ++E A+ + +A + E +
Sbjct: 238 QNKVNEALADYAVVTNINPYFIQPYIKRAKILIDQNQIEDALKEIRKAQNHEKNNAEIYY 297
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
G +G+ A+ ++A+ F P L++R + F+ + F A++DL+ + ++
Sbjct: 298 IEGNCYQKIGKLDMALHAYNRAITFCPKDEQYLNQRSELYFRLERFEEAIKDLNKAININ 357
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
++ +Y + IG+ +A + K ++++ N +A+ L L N +A
Sbjct: 358 SNSQFSYYNRAQSYLKIGQKDQAMKDLEKHVEINPNHSDAYYQLGFILTMLGNINQAFFY 417
Query: 574 LQQVLYIDKRFSKAYHLRGL--------LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ + ++ +F KAY RG+ L LG ++A DL+ + +DP+ Y R
Sbjct: 418 YCKAIQLNPKFQKAYANRGIDQILKVASLATSLGLKQQAFDDLNKAIELDPNCSNSYYNR 477
Query: 626 ASCYHAIG 633
+ +G
Sbjct: 478 GFSFSILG 485
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 19/172 (11%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG--------QARAAL 462
+P + +A G + A + +AIQ NP +A+ RG +L
Sbjct: 391 NPNHSDAYYQLGFILTMLGNINQAFFYYCKAIQLNPKFQKAYANRGIDQILKVASLATSL 450
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGI-------VNFKFKDFNAAVEDLSACVKLDKE 515
G +A DL+KA+E +PN ++ + RG + +F A++DL+ +++D
Sbjct: 451 GLKQQAFDDLNKAIELDPNCSNSYYNRGFSFSILGTLFVNLGNFELALKDLNQAIQIDPN 510
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLEAWGHLTQFYQDL 564
+ A GL + +G+ K+A + + I L+ L G L QFYQ L
Sbjct: 511 YQDALNNRGLVYNHLGQKKEALKDFNQIILLNPTNGAVLNNIGTL-QFYQGL 561
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE-------AIQDLSKALEFEPNSAD 484
+ A D +AI+ +P+ ++ RG + + LG A++DL++A++ +PN D
Sbjct: 454 QQAFDDLNKAIELDPNCSNSYYNRGFSFSILGTLFVNLGNFELALKDLNQAIQIDPNYQD 513
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
L+ RG+V A++D + + L+ N + +G G + + ++ LKA
Sbjct: 514 ALNNRGLVYNHLGQKKEALKDFNQIILLNPTNGAVLNNIGTLQFYQGLRQDSLQSFLKAN 573
Query: 545 QLDRN 549
Q +N
Sbjct: 574 QYCQN 578
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G VN G + A+ +Q ++ DP Y +AL RG + + A+ DF + I NP+
Sbjct: 485 GTLFVNLGNFELALKDLNQAIQIDPNYQDALNNRGLVYNHLGQKKEALKDFNQIILLNPT 544
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
G G + G +++Q KA ++ N IL G + F+ + + A
Sbjct: 545 NGAVLNNIGTLQFYQGLRQDSLQSFLKANQYCQNPV-ILVNIGNIYFEERMYQQA 598
>gi|145515088|ref|XP_001443449.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410827|emb|CAK76052.1| unnamed protein product [Paramecium tetraurelia]
Length = 736
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 124/263 (47%), Gaps = 10/263 (3%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQ 443
+R + + KY A++ D+I++ DP +A RG +++ EA I DF ++
Sbjct: 89 FNRALLYQKQKKYQEALNDLDKIIELDPKNAQAFNSRGNIYHDLEKDKEAMI-DFNTSLL 147
Query: 444 SNPSAGEAWKRRGQARAAL--------GESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
+P+ + RGQ G EA+ D +K++ +P S++ RG++ K
Sbjct: 148 LDPNNSNTYNNRGQFTVITLANLFSDQGLDQEALNDYNKSILLDPQSSNKYCNRGVLFRK 207
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ A+ D + ++L+ +N AY G+ + + +A + + KA L+ ++ +
Sbjct: 208 QERNQEALNDFNKAIELNNQNVEAYNSRGILFKELNKMDEAFKDYNKATDLNPKYVNSLY 267
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ Y +L EKAL+ VL ++ S Y+ RG L G+ + AIKD + + I+
Sbjct: 268 NRGNLYYNLGQKEKALKDYMLVLERNQAHSDTYNSRGNLYMNDGKIELAIKDYNKAIEIN 327
Query: 616 PSNIECLYLRASCYHAIGEYREA 638
P N L S Y+ +Y +A
Sbjct: 328 PLNPLYLTNLGSLYYHQKDYIKA 350
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%)
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LG+ L +G+ + A ++ K I+L+ + + + + +EKA QQ + +D
Sbjct: 23 LGILLDELGKIEDALKSFNKTIELNAKDAKLFKCRADLMEKMGQTEKAFNDYQQAIDLDP 82
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+F AY R LL ++++A+ DL + +DP N + R + YH + + +EA+I
Sbjct: 83 QFINAYFNRALLYQKQKKYQEALNDLDKIIELDPKNAQAFNSRGNIYHDLEKDKEAMI 140
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+L E G + K FN +E L+ ++ + + +G+ +KA + +AI
Sbjct: 26 LLDELGKIEDALKSFNKTIE-------LNAKDAKLFKCRADLMEKMGQTEKAFNDYQQAI 78
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
LD F+ A+ + YQ ++AL L +++ +D + ++A++ RG + H L + K+A
Sbjct: 79 DLDPQFINAYFNRALLYQKQKKYQEALNDLDKIIELDPKNAQAFNSRGNIYHDLEKDKEA 138
Query: 605 IKDLSSGLGIDPSN 618
+ D ++ L +DP+N
Sbjct: 139 MIDFNTSLLLDPNN 152
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 77/202 (38%), Gaps = 44/202 (21%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
++E A+ F + I+ N + +K R +G++ +A D +A++ +P + R
Sbjct: 32 KIEDALKSFNKTIELNAKDAKLFKCRADLMEKMGQTEKAFNDYQQAIDLDPQFINAYFNR 91
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ K K + A+ DL ++LD +N A+ G
Sbjct: 92 ALLYQKQKKYQEALNDLDKIIELDPKNAQAFNSRG------------------------- 126
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL--------LLHGLGQH 601
Y DL ++A+ L +D S Y+ RG L G
Sbjct: 127 ---------NIYHDLEKDKEAMIDFNTSLLLDPNNSNTYNNRGQFTVITLANLFSDQGLD 177
Query: 602 KKAIKDLSSGLGIDP--SNIEC 621
++A+ D + + +DP SN C
Sbjct: 178 QEALNDYNKSILLDPQSSNKYC 199
>gi|254412945|ref|ZP_05026717.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196180109|gb|EDX75101.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 863
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 117/257 (45%), Gaps = 2/257 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQ 443
L +G A G AI+ +D+ L+ P EA RG+A R EA IS +AIQ
Sbjct: 499 LGKGYALHKLGNLKEAITNYDKGLELKPNNYEAWSNRGSALRDLGHNKEAIISH-DKAIQ 557
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+ +AW RG A L EAI KA++ +P+ + + RG+V + A+
Sbjct: 558 IKSNYYQAWHNRGIALLNLRLLEEAIVSFDKAIQIKPDFHEAWNNRGVVLLNLRLLEEAI 617
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
+++ + A+ G AL ++ ++ KA++L + EA +
Sbjct: 618 VSFDKAIQIKPDFHEAWNNRGDALLNLRRLDESLACFDKALELKPDSWEALNNRGTVLLK 677
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L N +KAL C + + I +A++ R ++L LGQ K+AI + L I P+ E Y
Sbjct: 678 LKNLDKALTCFNKAIQIQPNLHQAWNNRSIVLRKLGQFKEAITSCNKALEIQPTYYEASY 737
Query: 624 LRASCYHAIGEYREAVI 640
+ G ++A+I
Sbjct: 738 NKGIALAMSGYLKQAII 754
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 115/278 (41%), Gaps = 34/278 (12%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + G AI D+ ++ Y +A RG A R LE AI F +AIQ
Sbjct: 534 NRGSALRDLGHNKEAIISHDKAIQIKSNYYQAWHNRGIALLNLRLLEEAIVSFDKAIQIK 593
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG L EAI KA++ +P+ + + RG + + ++
Sbjct: 594 PDFHEAWNNRGVVLLNLRLLEEAIVSFDKAIQIKPDFHEAWNNRGDALLNLRRLDESLAC 653
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LT 558
++L ++ A G L + KA KAIQ+ N +AW + L
Sbjct: 654 FDKALELKPDSWEALNNRGTVLLKLKNLDKALTCFNKAIQIQPNLHQAWNNRSIVLRKLG 713
Query: 559 QFYQDLANSEKALEC--------------------LQQVLY-------IDKRFSKAYHLR 591
QF + + + KALE L+Q + I + F +++R
Sbjct: 714 QFKEAITSCNKALEIQPTYYEASYNKGIALAMSGYLKQAIISFDKATQIKQDFHDNWYIR 773
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
GL + LG+ ++AI I P+N + Y +A CY
Sbjct: 774 GLAFYDLGRLEEAITSFEEATKIKPNNADNFYSKACCY 811
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I G++ AI+ ++ L+ P Y EA +G A A L+ AI F +A Q
Sbjct: 704 NRSIVLRKLGQFKEAITSCNKALEIQPTYYEASYNKGIALAMSGYLKQAIISFDKATQIK 763
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ W RG A LG EAI +A + +PN+AD + + + AVE
Sbjct: 764 QDFHDNWYIRGLAFYDLGRLEEAITSFEEATKIKPNNADNFYSKACCYALQNKIDLAVES 823
Query: 506 LSACVKLDKE 515
L +KL+ E
Sbjct: 824 LKQAIKLNPE 833
>gi|427737267|ref|YP_007056811.1| hypothetical protein Riv7116_3821 [Rivularia sp. PCC 7116]
gi|427372308|gb|AFY56264.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 279
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G AI+ + + + +P Y A GRG + + + AI+D+ EA++ P +A+
Sbjct: 72 QGDTQGAIAAYTKAISLNPEYVLAYNGRGLVQFDTGDRQGAIADYNEALRIAPDNAQAYN 131
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
R ARAA G+ A+QD KA+E PN A+ + RG D N A+ D + +++
Sbjct: 132 NRANARAAQGDVSGAVQDYDKAIELNPNYAEAYNNRGNARAADGDRNEAIADYTRAIEIK 191
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
AY G A ++ G+ + A + KAI+L+ NF A+ + +L + + L
Sbjct: 192 SNYAVAYNNRGNARAAQGDKEGAVADYNKAIELNPNFGAAYNNRGNARVELGDKDAGLAD 251
Query: 574 LQQVLYI 580
LQ+ I
Sbjct: 252 LQRAAEI 258
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ +K+ S++ ++ L+ RG+ Q + G AI+ +++ L+ P +A R AR
Sbjct: 78 AIAAYTKAISLNPEYVLAYNGRGLVQFDTGDRQGAIADYNEALRIAPDNAQAYNNRANAR 137
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
A Q ++ A+ D+ +AI+ NP+ EA+ RG ARAA G+ EAI D ++A+E + N A
Sbjct: 138 AAQGDVSGAVQDYDKAIELNPNYAEAYNNRGNARAADGDRNEAIADYTRAIEIKSNYAVA 197
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+ RG D AV D + ++L+ +AY G A +G+
Sbjct: 198 YNNRGNARAAQGDKEGAVADYNKAIELNPNFGAAYNNRGNARVELGD 244
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A+ +G + A+ +D+ ++ +P Y EA RG ARA + AI+D+T AI+
Sbjct: 132 NRANARAAQGDVSGAVQDYDKAIELNPNYAEAYNNRGNARAADGDRNEAIADYTRAIEIK 191
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ RG ARAA G+ A+ D +KA+E PN + RG + D +A + D
Sbjct: 192 SNYAVAYNNRGNARAAQGDKEGAVADYNKAIELNPNFGAAYNNRGNARVELGDKDAGLAD 251
Query: 506 LSACVKLDKE 515
L ++ +E
Sbjct: 252 LQRAAEIFQE 261
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P + +G + Q + + AI+ +T+AI NP A+ RG + G+ AI
Sbjct: 55 NPSTAKEFYAQGQYKHIQGDTQGAIAAYTKAISLNPEYVLAYNGRGLVQFDTGDRQGAIA 114
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++AL P++A + R D + AV+D ++L+ AY G A ++
Sbjct: 115 DYNEALRIAPDNAQAYNNRANARAAQGDVSGAVQDYDKAIELNPNYAEAYNNRGNARAAD 174
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+ +A + +AI++ N+ A+ + + E A+ + + ++ F AY+
Sbjct: 175 GDRNEAIADYTRAIEIKSNYAVAYNNRGNARAAQGDKEGAVADYNKAIELNPNFGAAYNN 234
Query: 591 RGLLLHGLGQHKKAIKDL 608
RG LG + DL
Sbjct: 235 RGNARVELGDKDAGLADL 252
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 83/174 (47%)
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+NPS + + +GQ + G++ AI +KA+ P + RG+V F D A+
Sbjct: 54 ANPSTAKEFYAQGQYKHIQGDTQGAIAAYTKAISLNPEYVLAYNGRGLVQFDTGDRQGAI 113
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
D + +++ +N AY A ++ G+ A + + KAI+L+ N+ EA+ +
Sbjct: 114 ADYNEALRIAPDNAQAYNNRANARAAQGDVSGAVQDYDKAIELNPNYAEAYNNRGNARAA 173
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ +A+ + + I ++ AY+ RG G + A+ D + + ++P+
Sbjct: 174 DGDRNEAIADYTRAIEIKSNYAVAYNNRGNARAAQGDKEGAVADYNKAIELNPN 227
>gi|428226918|ref|YP_007111015.1| hypothetical protein GEI7407_3496 [Geitlerinema sp. PCC 7407]
gi|427986819|gb|AFY67963.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
PCC 7407]
Length = 466
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A V+ + AI+ D L P + A RG E AI+ F AI P
Sbjct: 176 GKALVHLDRREEAIASLDTALALHPRHYRAWYNRGATLVELGRPEEAIASFDRAIALKPD 235
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AWK RG A LG EA+ +AL P D + + A+ L
Sbjct: 236 CDYAWKHRGLAWEQLGNYAEAVTSFERALAVAPKDCDAWKHYSYALQRVGRYEEAIASLD 295
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
V L ++ + G++L + Y++A +++ +AI L+ + ++W + + +
Sbjct: 296 QVVSLQPDDPRNWYQRGVSLGKLNRYEEAVDSYDRAIALNPHDPKSWYNRGVALEHMGCP 355
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E AL + + L + R A+ +RGLLL L Q ++A+ L L + P+N Y +A+
Sbjct: 356 EAALMNINRSLELHPRNHYAWLVRGLLLWQLRQPEEAMASLDESLRLQPNNPSAWYSKAA 415
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
+A G G A E AI+ + +A++ P++ E W RRG + L EAI + +A
Sbjct: 34 QAWYGLGNALFEAGRYEEAIARYDKALEIQPTSAEIWGRRGASLGQLRRDDEAIANFDRA 93
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
+ +P+ A + RG+V + + A++ ++ E A+T+ L +G Y++
Sbjct: 94 IALQPDLATAWYGRGLVLERQGQDDEALKSFETALEHHPEYYEAWTFRSYMLQKLGRYEE 153
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
+ A++L + W +L + L E+A+ L L + R +A++ RG L
Sbjct: 154 VVAGYETALKLQPGDYKTWYNLGKALVHLDRREEAIASLDTALALHPRHYRAWYNRGATL 213
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG+ ++AI + + P R + +G Y EAV
Sbjct: 214 VELGRPEEAIASFDRAIALKPDCDYAWKHRGLAWEQLGNYAEAV 257
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+ +G+ A+ F+ L+ P Y EA R E ++ + A++
Sbjct: 106 GRGLVLERQGQDDEALKSFETALEHHPEYYEAWTFRSYMLQKLGRYEEVVAGYETALKLQ 165
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + W G+A L EAI L AL P + RG + A+
Sbjct: 166 PGDYKTWYNLGKALVHLDRREEAIASLDTALALHPRHYRAWYNRGATLVELGRPEEAIAS 225
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + A+ + GLA +G Y +A + +A+ + +AW H + Q +
Sbjct: 226 FDRAIALKPDCDYAWKHRGLAWEQLGNYAEAVTSFERALAVAPKDCDAWKHYSYALQRVG 285
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+A+ L QV+ + + ++ RG+ L L ++++A+ + ++P + + Y R
Sbjct: 286 RYEEAIASLDQVVSLQPDDPRNWYQRGVSLGKLNRYEEAVDSYDRAIALNPHDPKSWYNR 345
Query: 626 ASCYHAIG 633
+G
Sbjct: 346 GVALEHMG 353
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A G+Y AI+ +D+ L+ P E RG + R + AI++F AI P
Sbjct: 40 GNALFEAGRYEEAIARYDKALEIQPTSAEIWGRRGASLGQLRRDDEAIANFDRAIALQPD 99
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW RG G+ EA++ ALE P + R + K + V
Sbjct: 100 LATAWYGRGLVLERQGQDDEALKSFETALEHHPEYYEAWTFRSYMLQKLGRYEEVVAGYE 159
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+KL + + LG AL + ++A + A+ L AW + +L
Sbjct: 160 TALKLQPGDYKTWYNLGKALVHLDRREEAIASLDTALALHPRHYRAWYNRGATLVELGRP 219
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E+A+ + + + A+ RGL LG + +A+ L + P + + +
Sbjct: 220 EEAIASFDRAIALKPDCDYAWKHRGLAWEQLGNYAEAVTSFERALAVAPKDCDAWKHYSY 279
Query: 628 CYHAIGEYREAV 639
+G Y EA+
Sbjct: 280 ALQRVGRYEEAI 291
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 97/240 (40%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
AI+ FD+ + P A GRG Q + + A+ F A++ +P EAW R
Sbjct: 86 AIANFDRAIALQPDLATAWYGRGLVLERQGQDDEALKSFETALEHHPEYYEAWTFRSYML 145
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
LG E + AL+ +P + G A+ L + L + A
Sbjct: 146 QKLGRYEEVVAGYETALKLQPGDYKTWYNLGKALVHLDRREEAIASLDTALALHPRHYRA 205
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ G L +G ++A + +AI L + AW H ++ L N +A+ ++ L
Sbjct: 206 WYNRGATLVELGRPEEAIASFDRAIALKPDCDYAWKHRGLAWEQLGNYAEAVTSFERALA 265
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + A+ L +G++++AI L + + P + Y R + Y EAV
Sbjct: 266 VAPKDCDAWKHYSYALQRVGRYEEAIASLDQVVSLQPDDPRNWYQRGVSLGKLNRYEEAV 325
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+F FN ++ C + + A+ LG AL G Y++A + KA+++ E
Sbjct: 13 SFSRWGFNRVLQ----CKMILNRDSQAWYGLGNALFEAGRYEEAIARYDKALEIQPTSAE 68
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
WG L ++A+ + + + + A++ RGL+L GQ +A+K + L
Sbjct: 69 IWGRRGASLGQLRRDDEAIANFDRAIALQPDLATAWYGRGLVLERQGQDDEALKSFETAL 128
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAV 639
P E R+ +G Y E V
Sbjct: 129 EHHPEYYEAWTFRSYMLQKLGRYEEVV 155
>gi|427735315|ref|YP_007054859.1| hypothetical protein Riv7116_1767 [Rivularia sp. PCC 7116]
gi|427370356|gb|AFY54312.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 225
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G + AI FD +++ +P + E RG A++ AA++DF +AI+ NP+ +A+
Sbjct: 51 QGNFQEAIEDFDNVVQTNPRFYEGFCLRGLAKSQLGNYRAAVTDFNQAIRLNPNHADAYH 110
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A LG + AI D K ++ +P D + G+ N++ A+ +L+ +KL+
Sbjct: 111 SRGNVYAILGNNPSAIADFKKTIKIDPKFTDAYYSLGLTNYRQGHHKQAITNLNKALKLN 170
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
AY GLA ++G + A KA L R
Sbjct: 171 PNLAEAYGNRGLAEYALGNKRSAVADLQKAASLFR 205
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q + AI DF +Q+NP E + RG A++ LG A+ D ++A+ PN AD H
Sbjct: 51 QGNFQEAIEDFDNVVQTNPRFYEGFCLRGLAKSQLGNYRAAVTDFNQAIRLNPNHADAYH 110
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG V + +A+ D +K+D + AY LGL G +K+A KA++L+
Sbjct: 111 SRGNVYAILGNNPSAIADFKKTIKIDPKFTDAYYSLGLTNYRQGHHKQAITNLNKALKLN 170
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQ 576
N EA+G+ L N A+ LQ+
Sbjct: 171 PNLAEAYGNRGLAEYALGNKRSAVADLQK 199
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
+F A+ED V+ + + GLA S +G Y+ A +AI+L+ N +A+
Sbjct: 53 NFQEAIEDFDNVVQTNPRFYEGFCLRGLAKSQLGNYRAAVTDFNQAIRLNPNHADAYHSR 112
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
Y L N+ A+ ++ + ID +F+ AY+ GL + G HK+AI +L+ L ++P+
Sbjct: 113 GNVYAILGNNPSAIADFKKTIKIDPKFTDAYYSLGLTNYRQGHHKQAITNLNKALKLNPN 172
Query: 618 NIECLYLRASCYHAIGEYREAV 639
E R +A+G R AV
Sbjct: 173 LAEAYGNRGLAEYALGNKRSAV 194
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A+ G Y +A++ F+Q ++ +P + +A RG A +AI+DF + I+ +P
Sbjct: 78 RGLAKSQLGNYRAAVTDFNQAIRLNPNHADAYHSRGNVYAILGNNPSAIADFKKTIKIDP 137
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ G G +AI +L+KAL+ PN A+ RG+ + + +AV DL
Sbjct: 138 KFTDAYYSLGLTNYRQGHHKQAITNLNKALKLNPNLAEAYGNRGLAEYALGNKRSAVADL 197
Query: 507 SACVKLDKE 515
L ++
Sbjct: 198 QKAASLFRQ 206
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 51 NWSKAIRILDSLLAQSYEI-QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
N+ +AI D+++ + + C R SQL ++ + D ++A++L+P AY +
Sbjct: 53 NFQEAIEDFDNVVQTNPRFYEGFCLRGLAKSQLGNYRAAVTDFNQAIRLNPNHADAYHSR 112
Query: 110 GCAFSALGRKEEALSVWEK------------------GYEHALHQSA--DLKQFLELEEL 149
G ++ LG A++ ++K Y H+ A +L + L+L
Sbjct: 113 GNVYAILGNNPSAIADFKKTIKIDPKFTDAYYSLGLTNYRQGHHKQAITNLNKALKLNPN 172
Query: 150 LTAAKQDRSVTCEYDVSNSMSSL 172
L A +R + EY + N S++
Sbjct: 173 LAEAYGNRGL-AEYALGNKRSAV 194
>gi|383318583|ref|YP_005379424.1| hypothetical protein Mtc_0133 [Methanocella conradii HZ254]
gi|379319953|gb|AFC98905.1| TPR repeat-containing protein [Methanocella conradii HZ254]
Length = 367
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 115/232 (49%), Gaps = 2/232 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A++ E A A+S ++ L+ PM G ++ L+ A+ F +A+ +
Sbjct: 131 ARALARIGES--AEALSCMEKALEATPMDANLWSYMGFYQSSLGMLDDAVKSFGKALAID 188
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G+A A GE EA++ +++ A+ + +G++ K K + A+
Sbjct: 189 PENAAAWLGKGEALALAGEDEEALKCFDRSIALNCGIANAWYGKGMILIKKKCYEDAMRM 248
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L V++ + A+ Y G L ++G+ K+A +++ + + + AW +
Sbjct: 249 LDKVVEIQPGHADAWFYRGCILEAMGKIKEALDSYTRVTEAEPKSHAAWFMRGVLLGRME 308
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ E A++C + + I+ +F+ A++ +GL LG ++A + +S + IDP
Sbjct: 309 DYEGAIQCFDKAIDINPKFAAAWYHKGLFSSILGDSEEAARCISRTIEIDPG 360
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ + ++ + + G Q + G A+ F + L DP A +G+G A A
Sbjct: 146 CMEKALEATPMDANLWSYMGFYQSSLGMLDDAVKSFGKALAIDPENAAAWLGKGEALALA 205
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
E E A+ F +I N AW +G +A++ L K +E +P AD
Sbjct: 206 GEDEEALKCFDRSIALNCGIANAWYGKGMILIKKKCYEDAMRMLDKVVEIQPGHADAWFY 265
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG + A++ + + + ++ +A+ G+ L + +Y+ A + KAI ++
Sbjct: 266 RGCILEAMGKIKEALDSYTRVTEAEPKSHAAWFMRGVLLGRMEDYEGAIQCFDKAIDINP 325
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
F AW H F L +SE+A C+ + + ID F
Sbjct: 326 KFAAAWYHKGLFSSILGDSEEAARCISRTIEIDPGF 361
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 114/255 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L G+ N G+ +I+ FD+ ++ DP EA +G + + A F AI+
Sbjct: 26 LKNGLEMANMGRMIDSIASFDEAIRLDPACAEAYNCKGLVLLQLKRYDKAFECFEHAIKL 85
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P + W + LG + Q +L+++P SA + H + + A+
Sbjct: 86 EPENPKFWYNKSMLFRELGMFEDEAQACLMSLKYDPGSAHVWHSCARALARIGESAEALS 145
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++ + + ++Y+G SS+G A ++ KA+ +D AW +
Sbjct: 146 CMEKALEATPMDANLWSYMGFYQSSLGMLDDAVKSFGKALAIDPENAAAWLGKGEALALA 205
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+AL+C + + ++ + A++ +G++L ++ A++ L + I P + + +
Sbjct: 206 GEDEEALKCFDRSIALNCGIANAWYGKGMILIKKKCYEDAMRMLDKVVEIQPGHADAWFY 265
Query: 625 RASCYHAIGEYREAV 639
R A+G+ +EA+
Sbjct: 266 RGCILEAMGKIKEAL 280
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 121/291 (41%), Gaps = 44/291 (15%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAISDFTEA 441
+G+ + +Y A F+ +K +P Y ++++ R F+ E +A + +
Sbjct: 62 KGLVLLQLKRYDKAFECFEHAIKLEPENPKFWYNKSMLFRELGM-FEDEAQACLM----S 116
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ +P + W +A A +GES EA+ + KALE P A++ G +
Sbjct: 117 LKYDPGSAHVWHSCARALARIGESAEALSCMEKALEATPMDANLWSYMGFYQSSLGMLDD 176
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------- 554
AV+ + +D EN +A+ G AL+ GE ++A + ++I L+ AW
Sbjct: 177 AVKSFGKALAIDPENAAAWLGKGEALALAGEDEEALKCFDRSIALNCGIANAWYGKGMIL 236
Query: 555 ---------------------GHLTQFY------QDLANSEKALECLQQVLYIDKRFSKA 587
GH ++ + + ++AL+ +V + + A
Sbjct: 237 IKKKCYEDAMRMLDKVVEIQPGHADAWFYRGCILEAMGKIKEALDSYTRVTEAEPKSHAA 296
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ +RG+LL + ++ AI+ + I+P Y + +G+ EA
Sbjct: 297 WFMRGVLLGRMEDYEGAIQCFDKAIDINPKFAAAWYHKGLFSSILGDSEEA 347
>gi|71650193|ref|XP_813799.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70878718|gb|EAN91948.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 703
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 1/254 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A +G Y AI + L+ DP +AL RG + AAI D+ A++ P
Sbjct: 271 RGLAYRKKGDYLRAIDEYSAALRLDPKNFKALFNRGFCSDKVEDYNAAIRDYEAAMKLEP 330
Query: 447 SAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ G + G EAI KA+ + N+AD H RG K + AVED
Sbjct: 331 GYAYTYYNLGISYDRWGGHYKEAIAMFDKAIALDSNNADFYHNRGFSQRKLGKYREAVED 390
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + LD ++ AY +GE A + KAI + + A+ + +
Sbjct: 391 YTMALSLDPQHFKAYYNRAFCYDKLGEGANAIADYTKAIAIQDDNPNAYHNRGAAMEKAG 450
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A+ + + +D Y+ RG+ G+ A++DL+ + + P+N R
Sbjct: 451 RLDDAIADYTRAIQLDDGNPFTYNARGIAYDRRGKSDAALQDLTQAIALSPNNPIFYQNR 510
Query: 626 ASCYHAIGEYREAV 639
A + + + EAV
Sbjct: 511 AFVFQNMERFPEAV 524
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 34/201 (16%)
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+ A++ N A E ++RG A G+ + AI + S AL +P + L RG + K +D
Sbjct: 256 SSALRGNEEA-ELHQQRGLAYRKKGDYLRAIDEYSAALRLDPKNFKALFNRGFCSDKVED 314
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+NAA+ D A +KL E AYTY L +S DR WG
Sbjct: 315 YNAAIRDYEAAMKL--EPGYAYTYYNLGIS-----------------YDR-----WG--- 347
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ ++A+ + + +D + YH RG LG++++A++D + L +DP +
Sbjct: 348 ------GHYKEAIAMFDKAIALDSNNADFYHNRGFSQRKLGKYREAVEDYTMALSLDPQH 401
Query: 619 IECLYLRASCYHAIGEYREAV 639
+ Y RA CY +GE A+
Sbjct: 402 FKAYYNRAFCYDKLGEGANAI 422
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 15/263 (5%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S + DF +RG +Q GKY A+ + L DP + +A R E AI+D
Sbjct: 365 SNNADFYHNRGFSQRKLGKYREAVEDYTMALSLDPQHFKAYYNRAFCYDKLGEGANAIAD 424
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+T+AI A+ RG A G +AI D ++A++ + + + RGI +
Sbjct: 425 YTKAIAIQDDNPNAYHNRGAAMEKAGRLDDAIADYTRAIQLDDGNPFTYNARGIAYDRRG 484
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA-EEAHLKAIQLDRNFLEAWGH 556
+AA++DL+ + L N Y ++ + +A + ++ LD
Sbjct: 485 KSDAALQDLTQAIALSPNNPIFYQNRAFVFQNMERFPEAVRDYNISLALLDEE------- 537
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+F + KA + L ++ K Y RG G ++ AI D S + +P
Sbjct: 538 -KRFANGATSKGKATQELNLLIL------KQYFNRGFCYAREGHYEAAICDFSMVMATNP 590
Query: 617 SNIECLYLRASCYHAIGEYREAV 639
N+ LY R C+ +G ++ AV
Sbjct: 591 DNLVALYNRGICHDKVGNHKLAV 613
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 127/336 (37%), Gaps = 75/336 (22%)
Query: 314 DSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRI 373
D A DSN N++ Y S K E+ + L +A N+ FC ++
Sbjct: 358 DKAIALDSN-NADFYHNRGFSQRKLGKYREAVEDYTMALS-LDPQHFKAYYNRAFCYDKL 415
Query: 374 SKSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
+ + D+ + RG A G+ AI+ + + ++ D P
Sbjct: 416 GEGANAIADYTKAIAIQDDNPNAYHNRGAAMEKAGRLDDAIADYTRAIQLDDGNPFTYNA 475
Query: 421 RGTARAFQRELEAAISDFTEAIQSNP---------------------------------- 446
RG A + + +AA+ D T+AI +P
Sbjct: 476 RGIAYDRRGKSDAALQDLTQAIALSPNNPIFYQNRAFVFQNMERFPEAVRDYNISLALLD 535
Query: 447 ----------SAGEA-----------WKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
S G+A + RG A G AI D S + P++
Sbjct: 536 EEKRFANGATSKGKATQELNLLILKQYFNRGFCYAREGHYEAAICDFSMVMATNPDNLVA 595
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+ RGI + K + AVED S ++LD EN A+ G AL S+GEY A + + A +
Sbjct: 596 LYNRGICHDKVGNHKLAVEDFSHLIELDAENAEAHFSRGTALESLGEYAMALDDYAVAFK 655
Query: 546 L--DRNFLEAWGHLTQF---YQDLANSEKALECLQQ 576
L DR+ L G L +F + + S++ L L++
Sbjct: 656 LDVDRSDLVDEGDLAKFKSEHHAMVASQRVLRLLKE 691
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
A+ LRG+ L KAI D ++ L IDPS+ Y RA+C++ G Y A++
Sbjct: 88 AFFLRGVCHVKLSWIDKAIADFTAALEIDPSHSRSTYERAACHNRKGNYTAAIL 141
>gi|86605310|ref|YP_474073.1| hypothetical protein CYA_0594 [Synechococcus sp. JA-3-3Ab]
gi|86553852|gb|ABC98810.1| TPR repeat protein [Synechococcus sp. JA-3-3Ab]
Length = 396
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ +A++ +D+ L+ P +PEA RG+ + A++ + A+Q P EA
Sbjct: 91 GQAQAALASYDRALQLKPDFPEAWNNRGSLLDDLGRHQEALASYERALQLRPDFFEARFN 150
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ LG EA++ + L F P+S + H G+ + + AV + ++
Sbjct: 151 QANTLRQLGRYQEALRAYEQVLTFRPDSGEAWHLHGLTLASLERWQEAVNSYDKALAINS 210
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + GLAL + Y +A ++ +A+QL W + L N +AL
Sbjct: 211 SDPRVWQSRGLALVHLERYAEALASYERALQLGLESASLWAGHALAHHRLGNWMEALNSY 270
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ L D R S+ + RGL+L L + AI+ L +DP + E Y +A C G+
Sbjct: 271 DRALQQDPRRSQIWVQRGLVLMDLNLYGLAIQSFDRALQMDPDDAEAHYAKACCCAWEGQ 330
Query: 635 YREAV 639
+A+
Sbjct: 331 VPQAL 335
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 82/207 (39%), Gaps = 18/207 (8%)
Query: 451 AWKRRGQARAA------------------LGESVEAIQDLSKALEFEPNSADILHERGIV 492
AW+ R Q RAA E +Q +A+ P + R
Sbjct: 27 AWRLRRQQRAAPPDSTTVLPATAIDLSALTAEQAAQLQPFEQAVGDRPRDPIAWYNRATT 86
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
+ AA+ ++L + A+ G L +G +++A ++ +A+QL +F E
Sbjct: 87 LDQMGQAQAALASYDRALQLKPDFPEAWNNRGSLLDDLGRHQEALASYERALQLRPDFFE 146
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
A + + L ++AL +QVL +A+HL GL L L + ++A+ L
Sbjct: 147 ARFNQANTLRQLGRYQEALRAYEQVLTFRPDSGEAWHLHGLTLASLERWQEAVNSYDKAL 206
Query: 613 GIDPSNIECLYLRASCYHAIGEYREAV 639
I+ S+ R + Y EA+
Sbjct: 207 AINSSDPRVWQSRGLALVHLERYAEAL 233
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG---- 129
NRA Q+ + + D+ALQL P +A+ +G LGR +EAL+ +E+
Sbjct: 82 NRATTLDQMGQAQAALASYDRALQLKPDFPEAWNNRGSLLDDLGRHQEALASYERALQLR 141
Query: 130 ---YEHALHQSADLKQFLELEELLTAAKQ 155
+E +Q+ L+Q +E L A +Q
Sbjct: 142 PDFFEARFNQANTLRQLGRYQEALRAYEQ 170
>gi|359460421|ref|ZP_09248984.1| hypothetical protein ACCM5_16968 [Acaryochloris sp. CCMEE 5410]
Length = 263
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 2/199 (1%)
Query: 412 PMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
P P + L+ G +A + + AIS + +AIQSNP A+ RG A LG+ AI
Sbjct: 36 PSEPAQTLLQSGREKAKRGNYQEAISIYNQAIQSNPRNTSAYIYRGLAYHDLGDYQGAIA 95
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D ++ALE EP+ A L+ RG DF A+ DL+ ++L AY + ++
Sbjct: 96 DFNRALEIEPDHAIALYNRGESRSDIGDFEGAIIDLTQAIRLKPNYAEAYNIRAIIFGAV 155
Query: 531 -GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
G+++KA + +AI +F +A+ + + Y + ++ A+ + + ++ ++AY
Sbjct: 156 QGQWEKALKDLNQAILFRPDFADAYYNRGRTYAAMRDATNAIANYTKAIELNAELAEAYG 215
Query: 590 LRGLLLHGLGQHKKAIKDL 608
RG++ G + AI DL
Sbjct: 216 NRGMIKAQTGDKQGAIVDL 234
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L G + G Y AISI++Q ++ +P A I RG A + + AI+DF A++
Sbjct: 44 LQSGREKAKRGNYQEAISIYNQAIQSNPRNTSAYIYRGLAYHDLGDYQGAIADFNRALEI 103
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAV 503
P A RG++R+ +G+ AI DL++A+ +PN A+ + R I+ + + A+
Sbjct: 104 EPDHAIALYNRGESRSDIGDFEGAIIDLTQAIRLKPNYAEAYNIRAIIFGAVQGQWEKAL 163
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+DL+ + + AY G +++ + A + KAI+L+ EA+G+
Sbjct: 164 KDLNQAILFRPDFADAYYNRGRTYAAMRDATNAIANYTKAIELNAELAEAYGN 216
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
EP A L + G K ++ A+ + ++ + N SAY Y GLA +G+Y+ A
Sbjct: 38 EP--AQTLLQSGREKAKRGNYQEAISIYNQAIQSNPRNTSAYIYRGLAYHDLGDYQGAIA 95
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+A++++ + A + + D+ + E A+ L Q + + +++AY++R ++ +
Sbjct: 96 DFNRALEIEPDHAIALYNRGESRSDIGDFEGAIIDLTQAIRLKPNYAEAYNIRAIIFGAV 155
Query: 599 -GQHKKAIKDLSSGLGIDPSNIECLYLRASCY-------HAIGEYREAV 639
GQ +KA+KDL+ + P + Y R Y +AI Y +A+
Sbjct: 156 QGQWEKALKDLNQAILFRPDFADAYYNRGRTYAAMRDATNAIANYTKAI 204
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
N ++A+ Q + + R + AY RGL H LG ++ AI D + L I+P + LY
Sbjct: 54 GNYQEAISIYNQAIQSNPRNTSAYIYRGLAYHDLGDYQGAIADFNRALEIEPDHAIALYN 113
Query: 625 RASCYHAIGEYREAVI 640
R IG++ A+I
Sbjct: 114 RGESRSDIGDFEGAII 129
>gi|225621426|ref|YP_002722685.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225216247|gb|ACN84981.1| putative TPR domain-containing protein [Brachyspira hyodysenteriae
WA1]
Length = 817
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 125/258 (48%), Gaps = 12/258 (4%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A Y ++I +++ L+ +P Y A I G + + AI + +A++ NP
Sbjct: 456 GLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPD 515
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ A +L + +++D +KALE + A+I G++ + ++ A+E +
Sbjct: 516 YSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGLIYSRQAVYDKAIEYYN 575
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD---- 563
++++ +AY + +LS++ +Y++A E + K I++ G+ +Y+
Sbjct: 576 KVLEINPNKVNAYYNIAFSLSNMDKYEEALEIYDKVIRM------YPGNFDVYYERGYTK 629
Query: 564 --LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ E+A+ ++ ++ + AY+ RG L + AIKD + + +N +
Sbjct: 630 YRASKYEEAVRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDGAIKDFDKAIEYNANNSDF 689
Query: 622 LYLRASCYHAIGEYREAV 639
RASCY + +YRE+V
Sbjct: 690 YSERASCYDYLNKYRESV 707
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 121/271 (44%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ +I + + V + ++ Y A+ ++ L D E G ++
Sbjct: 369 CLNKILEIDNTDVSIYNEIALIKIELELYDEALYYLNKALDIDTNNAEIYNSIGLVYHYK 428
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ E AI +F +AI+ N S A+ G A + + +IQ +KALE P A
Sbjct: 429 KNYEEAIRNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYIN 488
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G++ ++ A++ ++++ + AY + LA S+ +YK + E KA++L
Sbjct: 489 LGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGY 548
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ E + ++ Y A +KA+E +VL I+ AY+ L + ++++A++
Sbjct: 549 DEAEIYINIGLIYSRQAVYDKAIEYYNKVLEINPNKVNAYYNIAFSLSNMDKYEEALEIY 608
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + P N + Y R + +Y EAV
Sbjct: 609 DKVIRMYPGNFDVYYERGYTKYRASKYEEAV 639
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 3/208 (1%)
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
RG ++ R E AI DF AI+ + + RG A+ LG EAI+D + L+
Sbjct: 44 NRGLSKLNLRLYEEAIKDFERAIELGDDSETVYYDRGLAKLYLGNYEEAIEDFKRVLKIN 103
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
N D G+ K + A+ + +N S+Y GL + ++++A
Sbjct: 104 NNDTDSRVNIGLCYLYMKKYKEAINIYDEVIANFPDNISSYNNRGLCKFYLSQFEEAIND 163
Query: 540 HLKAIQLDRNFL--EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
K I+LD+N A+ + +L ++AL+C ++ + I+ AY+ L+ H
Sbjct: 164 FNKVIELDKNDTSSSAYNTIGLCKYNLNEFDEALKCYEKAIEINPNLISAYNNIALIKHS 223
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+G +A+ L+ L IDP+NIE YL+
Sbjct: 224 VGLDYEALSYLNKALEIDPNNIET-YLK 250
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 16/255 (6%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
R+ K + D R++ G+ + KY AI+I+D+++ P + RG + + +
Sbjct: 98 RVLKINNNDTDSRVNIGLCYLYMKKYKEAINIYDEVIANFPDNISSYNNRGLCKFYLSQF 157
Query: 432 EAAISDFTEAIQ--SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NS 482
E AI+DF + I+ N ++ A+ G + L E EA++ KA+E P N
Sbjct: 158 EEAINDFNKVIELDKNDTSSSAYNTIGLCKYNLNEFDEALKCYEKAIEINPNLISAYNNI 217
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A I H G+ D+ A+ L+ +++D N Y + +G +A E K
Sbjct: 218 ALIKHSVGL------DY-EALSYLNKALEIDPNNIETYLKIYSIKLELGLENEANEYLNK 270
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
I++ + + + + D E++LE L++ L I+ F AY+ LH L +
Sbjct: 271 IIEMHPDDIYVYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLDLNN 330
Query: 603 KAIKDLSSGLGIDPS 617
+A++ L L I P+
Sbjct: 331 EALEYLEKALQIYPN 345
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 14/216 (6%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+E ++ +A++ NP+ +A+ A L + EA++ L KAL+ PNSAD +
Sbjct: 295 MEESLEYLKKALEINPNFIDAYYDIAFALHKLDLNNEALEYLEKALQIYPNSADTYFKMF 354
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+V +D+ A+ L+ +++D + S Y + L + Y +A KA+ +D N
Sbjct: 355 LVKRALRDYEGALSCLNKILEIDNTDVSIYNEIALIKIELELYDEALYYLNKALDIDTNN 414
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
E + + Y N E+A+ + + ++ + AY+ GL + + ++ +I+ +
Sbjct: 415 AEIYNSIGLVYHYKKNYEEAIRNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQYYNK 474
Query: 611 GLGIDPSNIECLYLRASCY-------HAIGEYREAV 639
L I+P AS Y H +G Y+EA+
Sbjct: 475 ALEINPQ-------YASAYINLGLIKHNLGNYKEAI 503
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 120/255 (47%), Gaps = 2/255 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++ G Y AI F ++LK + ++ + G + ++ + AI+ + E I + P
Sbjct: 79 RGLAKLYLGNYEEAIEDFKRVLKINNNDTDSRVNIGLCYLYMKKYKEAINIYDEVIANFP 138
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN--SADILHERGIVNFKFKDFNAAVE 504
++ RG + L + EAI D +K +E + N S+ + G+ + +F+ A++
Sbjct: 139 DNISSYNNRGLCKFYLSQFEEAINDFNKVIELDKNDTSSSAYNTIGLCKYNLNEFDEALK 198
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
++++ SAY + L S+G +A KA+++D N +E + + +L
Sbjct: 199 CYEKAIEINPNLISAYNNIALIKHSVGLDYEALSYLNKALEIDPNNIETYLKIYSIKLEL 258
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+A E L +++ + Y G + G +++++ L L I+P+ I+ Y
Sbjct: 259 GLENEANEYLNKIIEMHPDDIYVYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYD 318
Query: 625 RASCYHAIGEYREAV 639
A H + EA+
Sbjct: 319 IAFALHKLDLNNEAL 333
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 92/183 (50%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ +A+Q P++ + + + + AL + A+ L+K LE + I +E ++
Sbjct: 332 ALEYLEKALQIYPNSADTYFKMFLVKRALRDYEGALSCLNKILEIDNTDVSIYNEIALIK 391
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ + ++ A+ L+ + +D N Y +GL Y++A KAI+L+ + A
Sbjct: 392 IELELYDEALYYLNKALDIDTNNAEIYNSIGLVYHYKKNYEEAIRNFNKAIELNTSMASA 451
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
+ ++ Y ++ + E +++ + L I+ +++ AY GL+ H LG +K+AI L
Sbjct: 452 YYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALE 511
Query: 614 IDP 616
I+P
Sbjct: 512 INP 514
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 101/219 (46%), Gaps = 10/219 (4%)
Query: 365 NKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N K + K+ I+ D+ L+ +A+++ Y +++ F++ L+ E I
Sbjct: 498 NYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINI 557
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + Q + AI + + ++ NP+ A+ + + + + EA++ K + P
Sbjct: 558 GLIYSRQAVYDKAIEYYNKVLEINPNKVNAYYNIAFSLSNMDKYEEALEIYDKVIRMYPG 617
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ D+ +ERG ++ + AV D + ++ ++ +AY Y G + + Y A +
Sbjct: 618 NFDVYYERGYTKYRASKYEEAVRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDGAIKDFD 677
Query: 542 KAIQLDRN---FL----EAWGHLTQFYQDLANSEKALEC 573
KAI+ + N F + +L ++ + + N +KA+E
Sbjct: 678 KAIEYNANNSDFYSERASCYDYLNKYRESVENYDKAIEL 716
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 106/239 (44%), Gaps = 17/239 (7%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD-----FTEAIQSNPSAGEAWKR 454
A+S ++ L+ DP E + + + +LE + + + I+ +P + R
Sbjct: 230 ALSYLNKALEIDPNNIETYL-----KIYSIKLELGLENEANEYLNKIIEMHPDDIYVYDR 284
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G + G E+++ L KALE PN D ++ K N A+E L +++
Sbjct: 285 IGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLDLNNEALEYLEKALQIYP 344
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ Y + L ++ +Y+ A K +++D + + + +L ++AL L
Sbjct: 345 NSADTYFKMFLVKRALRDYEGALSCLNKILEIDNTDVSIYNEIALIKIELELYDEALYYL 404
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ L ID ++ Y+ GL+ H +++AI++ + + ++ S AS Y+ IG
Sbjct: 405 NKALDIDTNNAEIYNSIGLVYHYKKNYEEAIRNFNKAIELNTS-------MASAYYNIG 456
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 48 SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
++RN++KAI + S+ + Y I Y ++ +++ I+ +KAL+++P AYI
Sbjct: 434 AIRNFNKAIELNTSMASAYYNI------GLAYYEMHDYENSIQYYNKALEINPQYASAYI 487
Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
G LG +EA+ ++K E
Sbjct: 488 NLGLIKHNLGNYKEAIDYYKKALE 511
>gi|375256532|ref|YP_005015699.1| tetratricopeptide repeat protein [Tannerella forsythia ATCC 43037]
gi|363408864|gb|AEW22550.1| tetratricopeptide repeat protein [Tannerella forsythia ATCC 43037]
Length = 695
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 40/280 (14%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++K P E R A+ + + A D + +++ NP +A+ RG
Sbjct: 39 YVLSIQYFNQVIKAKPWLAEPYFYRAVAKLNLDDFKGAEEDCSLSLERNPFLAQAYYARG 98
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN---------------- 500
AR +L EAI+D +K LEF+P+ ++ + I + KDF+
Sbjct: 99 IARQSLEMYDEAIEDYNKGLEFKPDDRPMMSNKAIAYVQKKDFSDAEHVFEDLIHAHPQY 158
Query: 501 ------------------AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A+ D +++D + Y + L G +K A +
Sbjct: 159 SLGYLTRGAMYLEKGDTALALNDYDKAIEIDPYHAPCYGNRAIVLYQTGRFKDALADLNE 218
Query: 543 AIQLDRNFLEAWGHLTQ---FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
AI+L N E+ ++ + YQ + + A+ QV+ +D R A RGLL +G
Sbjct: 219 AIRL--NTRESGYYINRGLVRYQ-MNDLRGAMADYDQVIDMDNRNLIARFNRGLLRAQVG 275
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +AI+D L +P N Y RA H +G+YR A+
Sbjct: 276 DNNRAIEDFDVVLEQEPDNYMAYYNRALLNHEVGDYRGAI 315
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 108/243 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ + Y AI +++ L+ P + + A +++ A F + I ++
Sbjct: 96 ARGIARQSLEMYDEAIEDYNKGLEFKPDDRPMMSNKAIAYVQKKDFSDAEHVFEDLIHAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++ A+ D KA+E +P A R IV ++ F A+ D
Sbjct: 156 PQYSLGYLTRGAMYLEKGDTALALNDYDKAIEIDPYHAPCYGNRAIVLYQTGRFKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ ++L+ Y GL + + + A + + I +D L A + +
Sbjct: 216 LNEAIRLNTRESGYYINRGLVRYQMNDLRGAMADYDQVIDMDNRNLIARFNRGLLRAQVG 275
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++ +A+E VL + AY+ R LL H +G ++ AI+D+ L P+ + Y R
Sbjct: 276 DNNRAIEDFDVVLEQEPDNYMAYYNRALLNHEVGDYRGAIRDIDVVLKQYPNFLPGYYSR 335
Query: 626 ASC 628
A
Sbjct: 336 AEA 338
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I +D ++++ P + + RG R QR+ AAI+D+ EAI +P EA+ RG AR
Sbjct: 603 IRDYDFVIRQAPGFIYSYYNRGNLRCAQRDFRAAIADYNEAILRDPEFAEAYFNRGLARL 662
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIV 492
+ G++ I DLSKA E IL+ GI+
Sbjct: 663 SQGDATHGIADLSKAGEL-----GILNAYGII 689
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 76/164 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I G++ A++ ++ ++ + I RG R +L A++D+ + I +
Sbjct: 198 NRAIVLYQTGRFKDALADLNEAIRLNTRESGYYINRGLVRYQMNDLRGAMADYDQVIDMD 257
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A RG RA +G++ AI+D LE EP++ + R ++N + D+ A+ D
Sbjct: 258 NRNLIARFNRGLLRAQVGDNNRAIEDFDVVLEQEPDNYMAYYNRALLNHEVGDYRGAIRD 317
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+ +K Y A + + A+ +L A++L+++
Sbjct: 318 IDVVLKQYPNFLPGYYSRAEAKRKLNDLSGADRDYLTAMKLEQD 361
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG + +G A A++ +D+ ++ DP + R + A++D EAI+
Sbjct: 163 LTRGAMYLEKGDTALALNDYDKAIEIDPYHAPCYGNRAIVLYQTGRFKDALADLNEAIRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + RG R + + A+ D + ++ + + RG++ + D N A+E
Sbjct: 223 NTRESGYYINRGLVRYQMNDLRGAMADYDQVIDMDNRNLIARFNRGLLRAQVGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D ++ + +N AY L +G+Y+ A ++ NFL +
Sbjct: 283 DFDVVLEQEPDNYMAYYNRALLNHEVGDYRGAIRDIDVVLKQYPNFLPGY 332
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 58/137 (42%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
+ ++RG+ + A++ +DQ++ D A RG RA + AI DF +
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVIDMDNRNLIARFNRGLLRAQVGDNNRAIEDFDVVL 288
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
+ P A+ R +G+ AI+D+ L+ PN + R K D + A
Sbjct: 289 EQEPDNYMAYYNRALLNHEVGDYRGAIRDIDVVLKQYPNFLPGYYSRAEAKRKLNDLSGA 348
Query: 503 VEDLSACVKLDKENKSA 519
D +KL+++ +
Sbjct: 349 DRDYLTAMKLEQDKRQG 365
>gi|270293968|ref|ZP_06200170.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270275435|gb|EFA21295.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 681
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 116/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E RG A+ + + A SD AIQ NP A++ RG
Sbjct: 33 YVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDYQGAESDCDAAIQRNPFVVGAYQIRG 92
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + EAI+D A++++P + + H + + + +D+ AA EDL + +
Sbjct: 93 LARIRQNKFDEAIEDYKTAIKYDPENVVLWHNLSLCHIQKEDYEAAKEDLGTLLTIAPRY 152
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--------------------- 555
AY G + +A KAI +DR + WG
Sbjct: 153 TRAYLMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQ 212
Query: 556 --HLT-------------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
HL+ +F+Q+ N A+ L ID ++ RGLL +G
Sbjct: 213 SIHLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGD 270
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D L ++P N+ ++ R G+YR A+
Sbjct: 271 DNRAIEDFDFVLKMEPDNMMAIFNRGLLRAQTGDYRGAI 309
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I ++ +GKY A + DQ + I R AR Q L A+SD+ A+ +
Sbjct: 192 ARAIVRLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 251
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D L+ EP++ + RG++ + D+ A+ D
Sbjct: 252 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMAIFNRGLLRAQTGDYRGAISD 311
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
S + + Y A IG+ K AE+ K +++
Sbjct: 312 YSKVIAEYPNFMAGYYQRAEARKKIGDCKGAEQDEFKIMKM 352
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 110/285 (38%), Gaps = 40/285 (14%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++N Y A S D ++ +P A RG AR Q + + AI D+ AI+ +P
Sbjct: 57 RGLAKINLDDYQGAESDCDAAIQRNPFVVGAYQIRGLARIRQNKFDEAIEDYKTAIKYDP 116
Query: 447 SAGEAWKR----------------------------------RGQARAALGESVEAIQDL 472
W RG+ ++++A++D
Sbjct: 117 ENVVLWHNLSLCHIQKEDYEAAKEDLGTLLTIAPRYTRAYLMRGEVSLKQNDTIQALRDF 176
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
KA++ + D R IV + + A DL + L +N Y LA
Sbjct: 177 DKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNN 236
Query: 533 YKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+ A + A+ +D NFL GH + + + +A+E VL ++ A
Sbjct: 237 LRGAMSDYDLALDIDPNNFL---GHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMAIF 293
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
RGLL G ++ AI D S + P+ + Y RA IG+
Sbjct: 294 NRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGYYQRAEARKKIGD 338
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + + A+ FD+ + D P+ R R Q + + A +D ++I
Sbjct: 157 LMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQSIHL 216
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + R AR A+ D AL+ +PN+ + RG++ + D N A+E
Sbjct: 217 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIE 276
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D +K++ +N A GL + G+Y+ A + K I NF+ +
Sbjct: 277 DFDFVLKMEPDNMMAIFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGY 326
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G AI FD +LK +P A+ RG RA + AISD+++ I
Sbjct: 260 NRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMAIFNRGLLRAQTGDYRGAISDYSKVIAEY 319
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
P+ + +R +AR +G+ A QD K ++ +
Sbjct: 320 PNFMAGYYQRAEARKKIGDCKGAEQDEFKIMKMQ 353
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 314 DSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRI 373
D + D ++ + ++KS + D+ + R+ + +K K+ T +
Sbjct: 514 DFYLVQDFASSIDDFTKSILLDDTFFPAYFMRALVRYKQLEYKKAEATMSEGATSGTTEM 573
Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
K + +++D+ + + + D +++ P + RG + ++ A
Sbjct: 574 KKPEVMAIDYEVVK--------------NDLDHVIQLAPDFVYGYYNRGNVSSLLKDYRA 619
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
A++D+ +AI+ +P EA+ RG LG + + I DLSKA E
Sbjct: 620 ALADYDKAIELSPDFAEAYFNRGLTHIFLGNNKQGIADLSKAGEL 664
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF ++
Sbjct: 225 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKM 284
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG RA G+ AI D SK + PN ++R K D A +
Sbjct: 285 EPDNMMAIFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGYYQRAEARKKIGDCKGAEQ 344
Query: 505 DLSACVKL--DKEN 516
D +K+ DK N
Sbjct: 345 DEFKIMKMQIDKRN 358
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 8/154 (5%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQ-ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
R RG+ +AS+I F + IL +D +P A R R Q E + A + +E
Sbjct: 508 RFMRGLDFYLVQDFASSIDDFTKSILLDDTFFP-AYFMRALVRYKQLEYKKAEATMSEGA 566
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
S G ++ + A E V+ DL ++ P+ + RG V+ KD+ AA
Sbjct: 567 TS----GTTEMKKPEVMAIDYEVVK--NDLDHVIQLAPDFVYGYYNRGNVSSLLKDYRAA 620
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ D ++L + AY GL +G K+
Sbjct: 621 LADYDKAIELSPDFAEAYFNRGLTHIFLGNNKQG 654
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 44/163 (26%)
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE----------E 538
RG+ + +DF ++++D + + LD AY L EYKKAE
Sbjct: 511 RGLDFYLVQDFASSIDDFTKSILLDDTFFPAYFMRALVRYKQLEYKKAEATMSEGATSGT 570
Query: 539 AHLK------------------AIQLDRNFLEAW---GHLTQFYQD----LANSEKALEC 573
+K IQL +F+ + G+++ +D LA+ +KA+E
Sbjct: 571 TEMKKPEVMAIDYEVVKNDLDHVIQLAPDFVYGYYNRGNVSSLLKDYRAALADYDKAIE- 629
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
+ F++AY RGL LG +K+ I DLS LGI
Sbjct: 630 ------LSPDFAEAYFNRGLTHIFLGNNKQGIADLSKAGELGI 666
>gi|416384390|ref|ZP_11684616.1| TPR repeat-containing protein [Crocosphaera watsonii WH 0003]
gi|357265058|gb|EHJ13868.1| TPR repeat-containing protein [Crocosphaera watsonii WH 0003]
Length = 210
Score = 82.4 bits (202), Expect = 7e-13, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 375 KSKSISVDF--RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
K+ +++VD + +GI + G Y A+ F+Q++ E+P A RG A + + E
Sbjct: 12 KTSALTVDTVEMVQQGIEKSRRGNYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFE 71
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A++DFT A++ +P EA+ RG LGE +AI D KALE PN A + G+
Sbjct: 72 QALADFTIALKLDPQMVEAYVNRGNVYLQLGEDEKAIADYEKALEINPNDAFAQNNLGLA 131
Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ A D + V +D AY GLAL +GE + A
Sbjct: 132 HLNSGSPGLAKIDFTEAVMIDPLYGEAYYNRGLALLDLGERENA 175
Score = 58.2 bits (139), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
++ +G ++ + + A+ DF + I NP A+ RG A ++LG+ +A+ D + AL+
Sbjct: 23 MVQQGIEKSRRGNYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFEQALADFTIALK 82
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P + RG V + + A+ D ++++ + A LGLA + G A+
Sbjct: 83 LDPQMVEAYVNRGNVYLQLGEDEKAIADYEKALEINPNDAFAQNNLGLAHLNSGSPGLAK 142
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+A+ +D + EA+ + DL E A+ Q+
Sbjct: 143 IDFTEAVMIDPLYGEAYYNRGLALLDLGERENAIADFQK 181
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG A + G++ A++ F LK DP EA + RG E E AI+D+ +A++
Sbjct: 58 FNRGYAHSSLGQFEQALADFTIALKLDPQMVEAYVNRGNVYLQLGEDEKAIADYEKALEI 117
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A G A G A D ++A+ +P + + RG+ + A+
Sbjct: 118 NPNDAFAQNNLGLAHLNSGSPGLAKIDFTEAVMIDPLYGEAYYNRGLALLDLGERENAIA 177
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
D + +E AL+ I KKA +
Sbjct: 178 DFQKAADIWEEMGEKIA-AQTALAEIDALKKASQ 210
Score = 49.3 bits (116), Expect = 0.006, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 71/152 (46%)
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
++GI + ++ A++D + + + ++ AY G A SS+G++++A A++LD
Sbjct: 25 QQGIEKSRRGNYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFEQALADFTIALKLD 84
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+EA+ + Y L EKA+ ++ L I+ + A + GL G A D
Sbjct: 85 PQMVEAYVNRGNVYLQLGEDEKAIADYEKALEINPNDAFAQNNLGLAHLNSGSPGLAKID 144
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + IDP E Y R +GE A+
Sbjct: 145 FTEAVMIDPLYGEAYYNRGLALLDLGERENAI 176
Score = 45.8 bits (107), Expect = 0.063, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 51 NWSKAIRILDSLLAQS-YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
N+ A++ + ++A++ +I NR + +S L + + D AL+LDP +++AY+ +
Sbjct: 35 NYQGALKDFNQVIAENPQDIHAYFNRGYAHSSLGQFEQALADFTIALKLDPQMVEAYVNR 94
Query: 110 GCAFSALGRKEEALSVWEKGYE 131
G + LG E+A++ +EK E
Sbjct: 95 GNVYLQLGEDEKAIADYEKALE 116
>gi|294508725|ref|YP_003572784.1| hypothetical protein SRM_02912 [Salinibacter ruber M8]
gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter
ruber M8]
Length = 554
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++ GI + G+ A+ +D+ L +P++ EAL G +LEAA+ F
Sbjct: 194 INLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADV 253
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P E W G LGE ++++ L+ +P S D + RGIV + F AVE
Sbjct: 254 YPEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVE 313
Query: 505 ---------------------------DLSACVK-----LDKENKSAYTYLGLALS--SI 530
DL A V+ L+ E A TY LAL+
Sbjct: 314 SYDMALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQ 373
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
G+ + A + K + L N+ EAW L + E+ALEC + + +D K +
Sbjct: 374 GDLRAARTYYEKTLDLKSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLDANVPKFWTA 433
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
R + +G+ +A++ + +D SN
Sbjct: 434 RADCAYKVGKLDEALESYQHAVRLDESN 461
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 104/245 (42%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
EG+ +A+ + D++++ P +A + RG E A+ + +A+ NP+ E
Sbjct: 135 EGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLI 194
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
G +LG EA++ +AL P + L G+ + + AAVE C +
Sbjct: 195 NLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVY 254
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
E+ + LG +GE +K+ EA+ + +D +AW + L +A+E
Sbjct: 255 PEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVES 314
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
L I F+ AY+ RG G + A++ L ++ + Y A Y G
Sbjct: 315 YDMALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQG 374
Query: 634 EYREA 638
+ R A
Sbjct: 375 DLRAA 379
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 14/250 (5%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S D +RGI G++ A+ +D L + A RG A A Q +LEAA+
Sbjct: 289 PYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAYYNRGNAEANQGDLEAAVES 348
Query: 438 FTEAIQ-SNPSAGE------AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ ++ P A A++ +G RAA K L+ + N + + G
Sbjct: 349 YERVLELEGPDAATYYNLALAYEEQGDLRAAR-------TYYEKTLDLKSNYPEAWYGLG 401
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ A+E V LD +T +G+ +A E++ A++LD +
Sbjct: 402 CCFDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHAVRLDESN 461
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
AW + + E+ALE +Q L +D + + Y + L LG+ ++I+ L +
Sbjct: 462 EHAWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKALLALGRADESIRALKT 521
Query: 611 GLGIDPSNIE 620
+DP+ E
Sbjct: 522 AFRLDPAKKE 531
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
Query: 467 EAIQDLSKALEFEP----NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
+ ++DL A E +P +S D L E F+ + A+E + ++L A+
Sbjct: 103 DPLEDLVAAYENDPSAYFDSGD-LEEIASFYFEEGEMETALEVIDRLIELHPYTSDAWMR 161
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
G+ L+++G ++A EA+ +A+ ++ E +L L ++ALE + L I+
Sbjct: 162 RGILLNNLGRPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVDEALEAYDEALSINP 221
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+A G+ L Q + A++ + P + E Y CY +GE
Sbjct: 222 LHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGE 273
>gi|254415937|ref|ZP_05029694.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196177364|gb|EDX72371.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 268
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 4/209 (1%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
V + + S+ ++ ++G+ ++ +G YA AIS F LK +P + RG A
Sbjct: 32 VVQEAPSEELTAVELYNQGVDKLEKGDYAGAISDFGDALKLEPEDADTYYNRGYAYHSLG 91
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+AAI D+T+AI+ NP +A+ RG + +AI D +KA+E +P + R
Sbjct: 92 NYDAAIYDYTQAIKLNPDFSQAYSNRGYTYFVRRDYQKAIADFTKAIEIDPENDTAYISR 151
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G + + A+ D + ++++ EN Y GL + + +Y+ A + K+I+L
Sbjct: 152 GNAYDELGNSEEALNDYAKALEINPENARLYYNRGLTRNRLEQYEDAIADYTKSIELQPT 211
Query: 550 FLEAWGH--LTQFYQDLANSEKALECLQQ 576
F EA+ + LTQF L N E A LQ+
Sbjct: 212 FAEAYYNRGLTQF--QLENIEAATADLQK 238
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
L +G + + + AISDF +A++ P + + RG A +LG AI D ++A++
Sbjct: 46 LYNQGVDKLEKGDYAGAISDFGDALKLEPEDADTYYNRGYAYHSLGNYDAAIYDYTQAIK 105
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P+ + RG F +D+ A+ D + +++D EN +AY G A
Sbjct: 106 LNPDFSQAYSNRGYTYFVRRDYQKAIADFTKAIEIDPENDTAYISRGNA----------- 154
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
Y +L NSE+AL + L I+ ++ Y+ RGL +
Sbjct: 155 -----------------------YDELGNSEEALNDYAKALEINPENARLYYNRGLTRNR 191
Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
L Q++ AI D + + + P+ E Y R
Sbjct: 192 LEQYEDAIADYTKSIELQPTFAEAYYNRG 220
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG Y AI+ F + ++ DP A I RG A E A++D+ +A++ N
Sbjct: 116 NRGYTYFVRRDYQKAIADFTKAIEIDPENDTAYISRGNAYDELGNSEEALNDYAKALEIN 175
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG R L + +AI D +K++E +P A+ + RG+ F+ ++ AA D
Sbjct: 176 PENARLYYNRGLTRNRLEQYEDAIADYTKSIELQPTFAEAYYNRGLTQFQLENIEAATAD 235
Query: 506 LSACVKLDKE 515
L +L KE
Sbjct: 236 LQKAAELFKE 245
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
L+ +G+ + D+ A+ D +KL+ E+ Y G A S+G Y A + +AI+
Sbjct: 46 LYNQGVDKLEKGDYAGAISDFGDALKLEPEDADTYYNRGYAYHSLGNYDAAIYDYTQAIK 105
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
L+ +F +A+ + Y + +KA+ + + ID AY RG LG ++A+
Sbjct: 106 LNPDFSQAYSNRGYTYFVRRDYQKAIADFTKAIEIDPENDTAYISRGNAYDELGNSEEAL 165
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + L I+P N Y R + + +Y +A+
Sbjct: 166 NDYAKALEINPENARLYYNRGLTRNRLEQYEDAI 199
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 47 CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
++ ++++AI+ L+ +Q+Y NR + Y ++ I D KA+++DP AY
Sbjct: 95 AAIYDYTQAIK-LNPDFSQAY-----SNRGYTYFVRRDYQKAIADFTKAIEIDPENDTAY 148
Query: 107 ILKGCAFSALGRKEEALSVWEKGYE 131
I +G A+ LG EEAL+ + K E
Sbjct: 149 ISRGNAYDELGNSEEALNDYAKALE 173
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+K+I +D +SRG A G A++ + + L+ +P RG R +
Sbjct: 135 TKAIEIDPENDTAYISRGNAYDELGNSEEALNDYAKALEINPENARLYYNRGLTRNRLEQ 194
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHER 489
E AI+D+T++I+ P+ EA+ RG + L E++E A DL KA E + +
Sbjct: 195 YEDAIADYTKSIELQPTFAEAYYNRGLTQFQL-ENIEAATADLQKAAELFKEQGRLDSHQ 253
Query: 490 GIVN 493
+VN
Sbjct: 254 SVVN 257
>gi|83814061|ref|YP_446792.1| hypothetical protein SRU_2700 [Salinibacter ruber DSM 13855]
gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855]
Length = 554
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 109/265 (41%), Gaps = 34/265 (12%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + G+ A+ +D+ L +P++ EAL G +LEAA+ F P
Sbjct: 197 GITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPE 256
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE--- 504
E W G LGE ++++ L+ +P S D + RGIV + F AVE
Sbjct: 257 HPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYD 316
Query: 505 ------------------------DLSACVK-----LDKENKSAYTYLGLALS--SIGEY 533
DL A V+ L+ E A TY LAL+ G+
Sbjct: 317 MALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQGDL 376
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
+ A + K + L N+ EAW L + E+ALEC + + +D K + R
Sbjct: 377 RAARTYYEKTLDLKSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLDANVPKFWTARAD 436
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSN 618
+ +G+ +A++ + +D SN
Sbjct: 437 CAYKVGKLDEALESYQHAVRLDESN 461
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 104/245 (42%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
EG+ +A+ + D++++ P +A + RG E A+ + +A+ NP+ E
Sbjct: 135 EGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLI 194
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
G +LG EA++ +AL P + L G+ + + AAVE C +
Sbjct: 195 NLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVY 254
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
E+ + LG +GE +K+ EA+ + +D +AW + L +A+E
Sbjct: 255 PEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVES 314
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
L I F+ AY+ RG G + A++ L ++ + Y A Y G
Sbjct: 315 YDMALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQG 374
Query: 634 EYREA 638
+ R A
Sbjct: 375 DLRAA 379
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 14/250 (5%)
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S D +RGI G++ A+ +D L + A RG A A Q +LEAA+
Sbjct: 289 PYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAYYNRGNAEANQGDLEAAVES 348
Query: 438 FTEAIQ-SNPSAGE------AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+ ++ P A A++ +G RAA K L+ + N + + G
Sbjct: 349 YERVLELEGPDAATYYNLALAYEEQGDLRAAR-------TYYEKTLDLKSNYPEAWYGLG 401
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ A+E V LD +T +G+ +A E++ A++LD +
Sbjct: 402 CCFDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHAVRLDESN 461
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
AW + + E+ALE +Q L +D + + Y + L LG+ ++I+ L +
Sbjct: 462 EHAWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKALLALGRADESIRALKT 521
Query: 611 GLGIDPSNIE 620
+DP+ E
Sbjct: 522 AFRLDPAKKE 531
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
Query: 467 EAIQDLSKALEFEP----NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
+ ++DL A E +P +S D L E F+ + A+E + ++L A+
Sbjct: 103 DPLEDLVAAYENDPSAYFDSGD-LEEIASFYFEEGEMETALEVIDRLIELHPYTSDAWMR 161
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
G+ L+++G ++A EA+ +A+ ++ E +L L ++ALE + L I+
Sbjct: 162 RGILLNNLGRPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVDEALEAYDEALSINP 221
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+A G+ L Q + A++ + P + E Y CY +GE
Sbjct: 222 LHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGE 273
>gi|126658024|ref|ZP_01729176.1| hypothetical protein CY0110_05397 [Cyanothece sp. CCY0110]
gi|126620662|gb|EAZ91379.1| hypothetical protein CY0110_05397 [Cyanothece sp. CCY0110]
Length = 214
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GI + +G Y +A++ F+Q++ ++P A RG A + + E A++DFT+ ++
Sbjct: 29 VQQGIEKSRQGNYEAAVNDFNQVIAQNPQDINAYFNRGFAYSSLGQFEQALADFTKVLKL 88
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P +A+ RG LGE +AI D KAL+ PN A + G+ + A
Sbjct: 89 DPQMVQAYVNRGNVYLQLGEDKKAIADYEKALKINPNDAFAQNNLGLAHLNAGSPELAEI 148
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
D + V +D AY GLAL +GE KKA
Sbjct: 149 DFTQAVTIDPMYGEAYYNRGLALIDLGETKKA 180
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
++ +G ++ Q EAA++DF + I NP A+ RG A ++LG+ +A+ D +K L+
Sbjct: 28 MVQQGIEKSRQGNYEAAVNDFNQVIAQNPQDINAYFNRGFAYSSLGQFEQALADFTKVLK 87
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
+P RG V + + A+ D +K++ + A LGLA + G + AE
Sbjct: 88 LDPQMVQAYVNRGNVYLQLGEDKKAIADYEKALKINPNDAFAQNNLGLAHLNAGSPELAE 147
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+A+ +D + +AY+ RGL L
Sbjct: 148 IDFTQAVTID----------------------------------PMYGEAYYNRGLALID 173
Query: 598 LGQHKKAIKDL 608
LG+ KKAI D
Sbjct: 174 LGETKKAIADF 184
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 76/154 (49%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
+ ++GI + ++ AAV D + + + ++ +AY G A SS+G++++A K ++
Sbjct: 28 MVQQGIEKSRQGNYEAAVNDFNQVIAQNPQDINAYFNRGFAYSSLGQFEQALADFTKVLK 87
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
LD ++A+ + Y L +KA+ ++ L I+ + A + GL G + A
Sbjct: 88 LDPQMVQAYVNRGNVYLQLGEDKKAIADYEKALKINPNDAFAQNNLGLAHLNAGSPELAE 147
Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + + IDP E Y R +GE ++A+
Sbjct: 148 IDFTQAVTIDPMYGEAYYNRGLALIDLGETKKAI 181
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 51 NWSKAIRILDSLLAQSYE-IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
N+ A+ + ++AQ+ + I NR F YS L + + D K L+LDP ++QAY+ +
Sbjct: 40 NYEAAVNDFNQVIAQNPQDINAYFNRGFAYSSLGQFEQALADFTKVLKLDPQMVQAYVNR 99
Query: 110 GCAFSALGRKEEALSVWEK 128
G + LG ++A++ +EK
Sbjct: 100 GNVYLQLGEDKKAIADYEK 118
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 34/132 (25%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR--------------- 425
++ +RG A + G++ A++ F ++LK DP +A + RG
Sbjct: 59 INAYFNRGFAYSSLGQFEQALADFTKVLKLDPQMVQAYVNRGNVYLQLGEDKKAIADYEK 118
Query: 426 --------AF-QREL----------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
AF Q L E A DFT+A+ +P GEA+ RG A LGE+
Sbjct: 119 ALKINPNDAFAQNNLGLAHLNAGSPELAEIDFTQAVTIDPMYGEAYYNRGLALIDLGETK 178
Query: 467 EAIQDLSKALEF 478
+AI D KA E
Sbjct: 179 KAIADFQKAAEI 190
>gi|427722230|ref|YP_007069507.1| hypothetical protein Lepto7376_0229 [Leptolyngbya sp. PCC 7376]
gi|427353950|gb|AFY36673.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 371
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+G+ +G+Y I+ +D+ L +P + +A RG A F E + + AI
Sbjct: 75 FEQGLEYGAQGRYEDEIASYDKALAINPEFHDAWFYRGLALGFLNRYEDEVISYDRAITL 134
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ G+ W R A LG+ AI A E P A+ + RGI+ F +
Sbjct: 135 QPNNGDTWFNRAVALENLGQIDAAITSYEAAGEANPEDAEAWYNRGILLGGLGRFEEEIA 194
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ +D + + G++L +G ++ E++ KA++ D +AW + + L
Sbjct: 195 SYDKSLSIDPTSTDTWYNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFGLL 254
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
EK +E +L ++ + ++ RG+ L LGQ +AI + +DP Y
Sbjct: 255 GEFEKEIESYDILLALNPEDADTWYNRGISLSDLGQESEAIVSYREAIRLDPQRDIVFYN 314
Query: 625 RASCYHAIGE 634
A +GE
Sbjct: 315 IAVSQVRLGE 324
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 3/252 (1%)
Query: 370 VTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
+ K+ +I+ +F RG+A +Y + +D+ + P + R A
Sbjct: 91 IASYDKALAINPEFHDAWFYRGLALGFLNRYEDEVISYDRAITLQPNNGDTWFNRAVALE 150
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+++AAI+ + A ++NP EAW RG LG E I K+L +P S D
Sbjct: 151 NLGQIDAAITSYEAAGEANPEDAEAWYNRGILLGGLGRFEEEIASYDKSLSIDPTSTDTW 210
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ RG+ +E ++ D EN+ A+ G+A +GE++K E++ + L
Sbjct: 211 YNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFGLLGEFEKEIESYDILLAL 270
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
+ + W + DL +A+ ++ + +D + ++ + LG+ A+
Sbjct: 271 NPEDADTWYNRGISLSDLGQESEAIVSYREAIRLDPQRDIVFYNIAVSQVRLGEIDAALD 330
Query: 607 DLSSGLGIDPSN 618
L + ++P+N
Sbjct: 331 SLEKAIELNPAN 342
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 98/224 (43%)
Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
A +G Q E I+ + +A+ NP +AW RG A L + + +A+
Sbjct: 73 AWFEQGLEYGAQGRYEDEIASYDKALAINPEFHDAWFYRGLALGFLNRYEDEVISYDRAI 132
Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+PN+ D R + +AA+ A + + E+ A+ G+ L +G +++
Sbjct: 133 TLQPNNGDTWFNRAVALENLGQIDAAITSYEAAGEANPEDAEAWYNRGILLGGLGRFEEE 192
Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
++ K++ +D + W + DL E+ +E + L D A++ RG+
Sbjct: 193 IASYDKSLSIDPTSTDTWYNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFG 252
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
LG+ +K I+ L ++P + + Y R +G+ EA++
Sbjct: 253 LLGEFEKEIESYDILLALNPEDADTWYNRGISLSDLGQESEAIV 296
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Query: 370 VTRISKSKSI---SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
+ KS SI S D +RG++ + G+ I +D+ L++DP +A RG A
Sbjct: 193 IASYDKSLSIDPTSTDTWYNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFG 252
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
E E I + + NP + W RG + + LG+ EAI +A+ +P +
Sbjct: 253 LLGEFEKEIESYDILLALNPEDADTWYNRGISLSDLGQESEAIVSYREAIRLDPQRDIVF 312
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+ + + + +AA++ L ++L+ N+S
Sbjct: 313 YNIAVSQVRLGEIDAALDSLEKAIELNPANRS 344
>gi|436735950|ref|YP_007318078.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428267551|gb|AFZ33495.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 222
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%)
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
Q+ G + AI F Q+++ +P Y EA RG A AF + + AI F +AI+ +P+ +
Sbjct: 46 QLERGNFQGAIQDFSQVIELNPDYMEAYCERGLAYAFLGDYQEAIEGFRQAIEIDPNHVD 105
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ R G A A++G+ AI+ + L PN D + RG+ ++ + AVED + +
Sbjct: 106 AYARWGTALASVGDLQGAIEKFDETLRLAPNFLDAYYNRGLAHYSLNNHEQAVEDFTQVI 165
Query: 511 KLDKENKSAYTYLGLALSSI 530
+L+ AY GLA ++
Sbjct: 166 QLEPALAQAYGRRGLAYYAL 185
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
AIQD S+ +E P+ + ERG+ D+ A+E +++D + AY G AL
Sbjct: 55 AIQDFSQVIELNPDYMEAYCERGLAYAFLGDYQEAIEGFRQAIEIDPNHVDAYARWGTAL 114
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+S+G+ + A E + ++L NFL+A+ + + L N E+A+E QV+ ++ ++A
Sbjct: 115 ASVGDLQGAIEKFDETLRLAPNFLDAYYNRGLAHYSLNNHEQAVEDFTQVIQLEPALAQA 174
Query: 588 YHLRGLLLHGLGQHKKAIKDL 608
Y RGL + L AI DL
Sbjct: 175 YGRRGLAYYALSNRSAAISDL 195
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 80/154 (51%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
E A+ L + + +F A++D S ++L+ + AY GLA + +G+Y++A E
Sbjct: 32 ESTQAENLFTQASTQLERGNFQGAIQDFSQVIELNPDYMEAYCERGLAYAFLGDYQEAIE 91
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+AI++D N ++A+ + + + A+E + L + F AY+ RGL + L
Sbjct: 92 GFRQAIEIDPNHVDAYARWGTALASVGDLQGAIEKFDETLRLAPNFLDAYYNRGLAHYSL 151
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
H++A++D + + ++P+ + R Y+A+
Sbjct: 152 NNHEQAVEDFTQVIQLEPALAQAYGRRGLAYYAL 185
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 92/185 (49%), Gaps = 11/185 (5%)
Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKR-NKKFCVTRISKSKSISVDFRLS---RGIA 390
+ ++++ST++ ++ + S + +R N + + S+ ++ D+ + RG+A
Sbjct: 27 ETQAAESTQAE-------NLFTQASTQLERGNFQGAIQDFSQVIELNPDYMEAYCERGLA 79
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
G Y AI F Q ++ DP + +A GTA A +L+ AI F E ++ P+ +
Sbjct: 80 YAFLGDYQEAIEGFRQAIEIDPNHVDAYARWGTALASVGDLQGAIEKFDETLRLAPNFLD 139
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
A+ RG A +L +A++D ++ ++ EP A RG+ + + +AA+ DL
Sbjct: 140 AYYNRGLAHYSLNNHEQAVEDFTQVIQLEPALAQAYGRRGLAYYALSNRSAAISDLQQAA 199
Query: 511 KLDKE 515
L ++
Sbjct: 200 TLFQQ 204
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L S+ + AI D L + D NR + L H+ + D + +QL+P L Q
Sbjct: 114 LASVGDLQGAIEKFDETLRLAPNFLDAYYNRGLAHYSLNNHEQAVEDFTQVIQLEPALAQ 173
Query: 105 AYILKGCAFSALGRKEEALS--------VWEKGYEHALHQSADLKQFLE 145
AY +G A+ AL + A+S ++G Q+ DL Q ++
Sbjct: 174 AYGRRGLAYYALSNRSAAISDLQQAATLFQQQGDRVGYQQTLDLIQIIQ 222
>gi|126660412|ref|ZP_01731522.1| TPR repeat [Cyanothece sp. CCY0110]
gi|126618278|gb|EAZ89037.1| TPR repeat [Cyanothece sp. CCY0110]
Length = 227
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
+++K RG L + +A+ D S A+E EP A + RG+ K++ AA+ D S
Sbjct: 8 QSYKNRGYLHHELKQEQKAVSDASAAIELEPIEAGVYANRGLAYNALKNYQAAIADHSRS 67
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
++L+ + Y G +G Y+ + +AIQL+ +F A+ Y+ + N ++
Sbjct: 68 IELEPKVPGWYYNRGRVYRKVGNYQSSVSDLNRAIQLNASFEWAYYQRGLTYKAMGNGQQ 127
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
A L + L + R +K Y RG + LG +K++I+DL+ + ++P E + RA Y
Sbjct: 128 AEADLTKALELGYREAKVYSNRGEIRLKLGNYKESIEDLTQTIQLEPDRAEDHHNRAIAY 187
Query: 630 HAIGEY 635
H +G +
Sbjct: 188 HNLGNF 193
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%)
Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
+ I +RG+A Y +AI+ + ++ +P P RG ++++S
Sbjct: 37 EPIEAGVYANRGLAYNALKNYQAAIADHSRSIELEPKVPGWYYNRGRVYRKVGNYQSSVS 96
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
D AIQ N S A+ +RG A+G +A DL+KALE A + RG + K
Sbjct: 97 DLNRAIQLNASFEWAYYQRGLTYKAMGNGQQAEADLTKALELGYREAKVYSNRGEIRLKL 156
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
++ ++EDL+ ++L+ + + +A ++G +
Sbjct: 157 GNYKESIEDLTQTIQLEPDRAEDHHNRAIAYHNLGNF 193
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 73/151 (48%)
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG ++ + K AV D SA ++L+ Y GLA +++ Y+ A H ++I+L+
Sbjct: 13 RGYLHHELKQEQKAVSDASAAIELEPIEAGVYANRGLAYNALKNYQAAIADHSRSIELEP 72
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + + Y+ + N + ++ L + + ++ F AY+ RGL +G ++A DL
Sbjct: 73 KVPGWYYNRGRVYRKVGNYQSSVSDLNRAIQLNASFEWAYYQRGLTYKAMGNGQQAEADL 132
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ L + + R +G Y+E++
Sbjct: 133 TKALELGYREAKVYSNRGEIRLKLGNYKESI 163
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P+ RG A + +AAI+D + +I+ P + RG+ +G ++
Sbjct: 37 EPIEAGVYANRGLAYNALKNYQAAIADHSRSIELEPKVPGWYYNRGRVYRKVGNYQSSVS 96
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
DL++A++ + ++RG+ + A DL+ ++L Y+ G +
Sbjct: 97 DLNRAIQLNASFEWAYYQRGLTYKAMGNGQQAEADLTKALELGYREAKVYSNRGEIRLKL 156
Query: 531 GEYKKAEEAHLKAIQLD 547
G YK++ E + IQL+
Sbjct: 157 GNYKESIEDLTQTIQLE 173
>gi|332666951|ref|YP_004449739.1| hypothetical protein [Haliscomenobacter hydrossis DSM 1100]
gi|332335765|gb|AEE52866.1| Tetratricopeptide TPR_1 repeat-containing protein
[Haliscomenobacter hydrossis DSM 1100]
Length = 363
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 123/270 (45%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+ + ++ D +R + E +Y A++ + ++++ +P A RG F
Sbjct: 7 LNEVIATRPDYADAYFNRAVLYTQERRYEEALADYAKVIELNPTDTGAYNNRGNLYIFFN 66
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E AISDF AI N +A+ R +G EA+ D A+E + R
Sbjct: 67 RAEEAISDFNAAIALNEVDPDAYYNRAILFTEMGRLEEALADYDTAIEKNFQDPAVHFNR 126
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+V + D+ A++DL+ +KL ++ +Y + + +Y++A + + AI++ N
Sbjct: 127 AMVLLRQGDWENALDDLATTIKLRPDHADSYVARANVYTDLRKYQEALDDYSLAIRIRPN 186
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
F A + L E+AL+ +VL I+ + A+ RG LL L ++ +A+ D S
Sbjct: 187 FFIAHFNRANLLYGLGYLEEALKDYSKVLEINPKEVNAWVSRGNLLDDLERYDEALADYS 246
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + P+ + + RA + Y EA+
Sbjct: 247 QAIELQPNGADARFNRAIVLKKLERYDEAL 276
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 106/239 (44%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I ++++ P Y +A R +R E A++D+ + I+ NP+ A+ RG
Sbjct: 4 IEELNEVIATRPDYADAYFNRAVLYTQERRYEEALADYAKVIELNPTDTGAYNNRGNLYI 63
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+ EAI D + A+ D + R I+ + A+ D ++ + ++ + +
Sbjct: 64 FFNRAEEAISDFNAAIALNEVDPDAYYNRAILFTEMGRLEEALADYDTAIEKNFQDPAVH 123
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
+ L G+++ A + I+L + +++ Y DL ++AL+ + I
Sbjct: 124 FNRAMVLLRQGDWENALDDLATTIKLRPDHADSYVARANVYTDLRKYQEALDDYSLAIRI 183
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
F A+ R LL+GLG ++A+KD S L I+P + R + + Y EA+
Sbjct: 184 RPNFFIAHFNRANLLYGLGYLEEALKDYSKVLEINPKEVNAWVSRGNLLDDLERYDEAL 242
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 13/275 (4%)
Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDF-------------RLSRGIAQVNEGKYASAI 401
L E +A N+ T + + + D+ +R + + +G + +A+
Sbjct: 81 LNEVDPDAYYNRAILFTEMGRLEEALADYDTAIEKNFQDPAVHFNRAMVLLRQGDWENAL 140
Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
+K P + ++ + R R+ + A+ D++ AI+ P+ A R
Sbjct: 141 DDLATTIKLRPDHADSYVARANVYTDLRKYQEALDDYSLAIRIRPNFFIAHFNRANLLYG 200
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
LG EA++D SK LE P + RG + + ++ A+ D S ++L A
Sbjct: 201 LGYLEEALKDYSKVLEINPKEVNAWVSRGNLLDDLERYDEALADYSQAIELQPNGADARF 260
Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
+ L + Y +A E + I+ + EA+ + DL E+AL +Q +
Sbjct: 261 NRAIVLKKLERYDEALEDYSTIIEQNPGEAEAYNNRGNLLCDLGREEEALADYEQAIINR 320
Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+++ Y R ++L LG+ +A +D + I+P
Sbjct: 321 PDYAEGYINRAIVLKALGRIGEAREDYQRAIAINP 355
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 111/260 (42%)
Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
+ D +R I G+ A++ +D ++++ P R Q + E A+ D
Sbjct: 84 VDPDAYYNRAILFTEMGRLEEALADYDTAIEKNFQDPAVHFNRAMVLLRQGDWENALDDL 143
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
I+ P +++ R L + EA+ D S A+ PN R + +
Sbjct: 144 ATTIKLRPDHADSYVARANVYTDLRKYQEALDDYSLAIRIRPNFFIAHFNRANLLYGLGY 203
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
A++D S ++++ + +A+ G L + Y +A + +AI+L N +A +
Sbjct: 204 LEEALKDYSKVLEINPKEVNAWVSRGNLLDDLERYDEALADYSQAIELQPNGADARFNRA 263
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ L ++ALE ++ + ++AY+ RG LL LG+ ++A+ D + P
Sbjct: 264 IVLKKLERYDEALEDYSTIIEQNPGEAEAYNNRGNLLCDLGREEEALADYEQAIINRPDY 323
Query: 619 IECLYLRASCYHAIGEYREA 638
E RA A+G EA
Sbjct: 324 AEGYINRAIVLKALGRIGEA 343
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 111/262 (42%), Gaps = 7/262 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + AIS F+ + + + P+A R LE A++D+ AI+ N
Sbjct: 57 NRGNLYIFFNRAEEAISDFNAAIALNEVDPDAYYNRAILFTEMGRLEEALADYDTAIEKN 116
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
R G+ A+ DL+ ++ P+ AD R V + + A++D
Sbjct: 117 FQDPAVHFNRAMVLLRQGDWENALDDLATTIKLRPDHADSYVARANVYTDLRKYQEALDD 176
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S +++ A+ L +G ++A + + K ++++ + AW DL
Sbjct: 177 YSLAIRIRPNFFIAHFNRANLLYGLGYLEEALKDYSKVLEINPKEVNAWVSRGNLLDDLE 236
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL Q + + + A R ++L L ++ +A++D S+ + +P E R
Sbjct: 237 RYDEALADYSQAIELQPNGADARFNRAIVLKKLERYDEALEDYSTIIEQNPGEAEAYNNR 296
Query: 626 ASCY-------HAIGEYREAVI 640
+ A+ +Y +A+I
Sbjct: 297 GNLLCDLGREEEALADYEQAII 318
>gi|428207485|ref|YP_007091838.1| hypothetical protein Chro_2486 [Chroococcidiopsis thermalis PCC
7203]
gi|428009406|gb|AFY87969.1| Tetratricopeptide TPR_1 repeat-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 424
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 9/247 (3%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRE-LEAAISDFTEAIQSNPSAGEAWKRRGQA 458
AIS +D +K DP + +A I RG Q++ EAAI+DFT+AI+ + + +A R A
Sbjct: 60 AISDYDLAIKLDPQHYKAYICRGITYLEQKQNAEAAIADFTKAIEVDSNKIQAHVNRANA 119
Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
+ L + A++DLS A+ P+ +D RG + + D++AAV D S + L+ +
Sbjct: 120 YSYLNDYSAALKDLSTAIHIAPDRSDSYLNRGYIWVRTGDYHAAVVDFSQAIVLNPDFAI 179
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLD----RNFLEAWGHLTQFYQDLANSEKALECL 574
AY G A + + + A + I LD +N + A+ + + + L A
Sbjct: 180 AYLNRGNAYKKLAQTQAALNDYAAVIHLDKTNSKNVVTAYVYRGEILESLGELAAAFSEY 239
Query: 575 QQVLYI--DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+ + + D+ F + H RG LL GQ A++ + + +D + C RA +
Sbjct: 240 DRAIELCPDEHFLQ--HKRGALLCQFGQLSSALEHYNIAISLDRKCMYCYADRAWVRKNL 297
Query: 633 GEYREAV 639
G+ A+
Sbjct: 298 GDISGAI 304
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + EG A+ F++ LK DP E + RG + + + AISD+ AI+ +P
Sbjct: 14 GLHALFEGNVKIALLYFNKALKLDPNLVEVIYNRGNLYSILKMSDKAISDYDLAIKLDPQ 73
Query: 448 AGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ RG ++ E AI D +KA+E + N R D++AA++DL
Sbjct: 74 HYKAYICRGITYLEQKQNAEAAIADFTKAIEVDSNKIQAHVNRANAYSYLNDYSAALKDL 133
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S + + + +Y G G+Y A +AI L+ +F A+ + Y+ LA
Sbjct: 134 STAIHIAPDRSDSYLNRGYIWVRTGDYHAAVVDFSQAIVLNPDFAIAYLNRGNAYKKLAQ 193
Query: 567 SEKALECLQQVLYIDKRFSK----AYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++ AL V+++DK SK AY RG +L LG+ A + + + P
Sbjct: 194 TQAALNDYAAVIHLDKTNSKNVVTAYVYRGEILESLGELAAAFSEYDRAIELCP 247
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 116/301 (38%), Gaps = 56/301 (18%)
Query: 358 TSNEAKRNKKFCVTRISKSKSI---SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMY 414
T E K+N + + +K+ + + ++R A Y++A+ + P
Sbjct: 84 TYLEQKQNAEAAIADFTKAIEVDSNKIQAHVNRANAYSYLNDYSAALKDLSTAIHIAPDR 143
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
++ + RG + AA+ DF++AI NP A+ RG A L ++
Sbjct: 144 SDSYLNRGYIWVRTGDYHAAVVDFSQAIVLNPDFAIAYLNRGNAYKKLAQT--------- 194
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK----SAYTYLGLALSSI 530
AA+ D +A + LDK N +AY Y G L S+
Sbjct: 195 -------------------------QAALNDYAAVIHLDKTNSKNVVTAYVYRGEILESL 229
Query: 531 GEYKKAEEAHLKAIQL--DRNFLE--AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
GE A + +AI+L D +FL+ L QF Q ALE + +D++
Sbjct: 230 GELAAAFSEYDRAIELCPDEHFLQHKRGALLCQFGQ----LSSALEHYNIAISLDRKCMY 285
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH-------AIGEYREAV 639
Y R + LG AI D S + +P N+ R Y A +Y +A+
Sbjct: 286 CYADRAWVRKNLGDISGAIADWSQVIEQNPENVLAYIERGELYFQSHQLKAAKADYTKAI 345
Query: 640 I 640
I
Sbjct: 346 I 346
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R + N G + AI+ + Q+++++P A I RG +L+AA +D+T+AI P
Sbjct: 290 RAWVRKNLGDISGAIADWSQVIEQNPENVLAYIERGELYFQSHQLKAAKADYTKAIILEP 349
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ R + +L V A++D +A+E P+ A R +V +FK AV +
Sbjct: 350 DEPHFYVVRAEVNLSLNYLVAALKDCDRAIEIAPDFARANLIRTLVKLRFKKMGTAVSN 408
>gi|254384605|ref|ZP_04999944.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194343489|gb|EDX24455.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 1033
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 110/247 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG + G++ A++ F + + P Y AL G G + E A++ FT AI
Sbjct: 688 GRGDVYRSLGRHEEAVAEFTRAIALTPDYWWALAGCGYSYTSLGRHEEAVAVFTRAIALA 747
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG A LG E++ D +A++ E + +L RG V + A D
Sbjct: 748 PDDRWAFAGRGDAYRRLGRPEESLADFDRAIDIELTYSWVLARRGDVYRCLDRYGEAEAD 807
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + LD ++ A T+ G+ + + +A + AI LD + A GH ++
Sbjct: 808 FTRAIALDPDDGWALTHRGMTRAMLDRQDEAVADYDAAIGLDPDDGWALGHRGMSHRMSG 867
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+AL L + + I S RGLL LG H A+ DL+ L ++P N Y
Sbjct: 868 RYEQALADLDRAVEITPDDSWPLTSRGLLHRLLGHHDAALADLTRALTLEPDNAWSHYES 927
Query: 626 ASCYHAI 632
A HA+
Sbjct: 928 AVVLHAL 934
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 2/254 (0%)
Query: 387 RGIA-QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
RG+A QV E +Y AI+ FD+ L+ Y AL RG E A++DF A+ +
Sbjct: 587 RGLALQVAE-RYEEAIADFDRSLELRSDYEWALTSRGATFRLMGRYEEALADFNRAVDLD 645
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + A RG A ++G EA+ D +A+E +P+ L RG V AV +
Sbjct: 646 PGSAWAHASRGAAFNSMGRYEEALADFHRAIELKPDYDWPLAGRGDVYRSLGRHEEAVAE 705
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L + A G + +S+G +++A +AI L + A+ Y+ L
Sbjct: 706 FTRAIALTPDYWWALAGCGYSYTSLGRHEEAVAVFTRAIALAPDDRWAFAGRGDAYRRLG 765
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E++L + + I+ +S RG + L ++ +A D + + +DP + L R
Sbjct: 766 RPEESLADFDRAIDIELTYSWVLARRGDVYRCLDRYGEAEADFTRAIALDPDDGWALTHR 825
Query: 626 ASCYHAIGEYREAV 639
+ EAV
Sbjct: 826 GMTRAMLDRQDEAV 839
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 105/253 (41%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG N Y A++ ++ L DP A GRG R L+ AI+D+T A++ P
Sbjct: 519 RGRNHRNADAYPQALADYEHALALDPENERAHFGRGRTRHLTGRLDEAIADYTRAVELAP 578
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
RG A EAI D ++LE + L RG + A+ D
Sbjct: 579 EDLTNVSYRGLALQVAERYEEAIADFDRSLELRSDYEWALTSRGATFRLMGRYEEALADF 638
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ V LD + A+ G A +S+G Y++A +AI+L ++ Y+ L
Sbjct: 639 NRAVDLDPGSAWAHASRGAAFNSMGRYEEALADFHRAIELKPDYDWPLAGRGDVYRSLGR 698
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
E+A+ + + + + A G LG+H++A+ + + + P + R
Sbjct: 699 HEEAVAEFTRAIALTPDYWWALAGCGYSYTSLGRHEEAVAVFTRAIALAPDDRWAFAGRG 758
Query: 627 SCYHAIGEYREAV 639
Y +G E++
Sbjct: 759 DAYRRLGRPEESL 771
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 103/257 (40%), Gaps = 6/257 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG---RGTARAFQRELEAAISDFTEA 441
RG + G+ AI+ + + ++ + PE L RG A E AI+DF +
Sbjct: 551 FGRGRTRHLTGRLDEAIADYTRAVE---LAPEDLTNVSYRGLALQVAERYEEAIADFDRS 607
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ A RG +G EA+ D ++A++ +P SA RG +
Sbjct: 608 LELRSDYEWALTSRGATFRLMGRYEEALADFNRAVDLDPGSAWAHASRGAAFNSMGRYEE 667
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D ++L + G S+G +++A +AI L ++ A Y
Sbjct: 668 ALADFHRAIELKPDYDWPLAGRGDVYRSLGRHEEAVAEFTRAIALTPDYWWALAGCGYSY 727
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
L E+A+ + + + A+ RG LG+ ++++ D + I+ +
Sbjct: 728 TSLGRHEEAVAVFTRAIALAPDDRWAFAGRGDAYRRLGRPEESLADFDRAIDIELTYSWV 787
Query: 622 LYLRASCYHAIGEYREA 638
L R Y + Y EA
Sbjct: 788 LARRGDVYRCLDRYGEA 804
>gi|124003812|ref|ZP_01688660.1| TPR repeat protein [Microscilla marina ATCC 23134]
gi|123990867|gb|EAY30334.1| TPR repeat protein [Microscilla marina ATCC 23134]
Length = 236
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 90/169 (53%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L +G + EG + A+ F+ +++D A RG A ++ + A+ DF ++I+
Sbjct: 27 LEKGRTFMQEGNFKEAVRYFNWAVEKDAQSYAAFNARGAAYFSLKDYDNALLDFNQSIKL 86
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N +A+ RG R + A+ D ++AL N D+ RG+VN + ++++AA++
Sbjct: 87 NDKDYKAFMNRGNVRRETNDLKGALADYTQALPLNNNVPDLYLNRGVVNAQLQNYDAALK 146
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
D + +K +K+NK+AY G L + ++K+A A+QLD F +A
Sbjct: 147 DFNEVIKRNKQNKNAYYNRGNILYTQKKFKEAIADFRTAVQLDARFAKA 195
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + Y +A+ F+Q +K + +A + RG R +L+ A++D+T+A+ N
Sbjct: 62 ARGAAYFSLKDYDNALLDFNQSIKLNDKDYKAFMNRGNVRRETNDLKGALADYTQALPLN 121
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ + + RG A L A++D ++ ++ + + + RG + + K F A+ D
Sbjct: 122 NNVPDLYLNRGVVNAQLQNYDAALKDFNEVIKRNKQNKNAYYNRGNILYTQKKFKEAIAD 181
Query: 506 LSACVKLDKENKSAYTYLGLA 526
V+LD A LG+A
Sbjct: 182 FRTAVQLDARFAKALYALGMA 202
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 87/181 (48%)
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q+ + EA+ +G+ G EA++ + A+E + S + RG F KD++ A
Sbjct: 17 QACSKSSEAFLEKGRTFMQEGNFKEAVRYFNWAVEKDAQSYAAFNARGAAYFSLKDYDNA 76
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + +KL+ ++ A+ G + K A + +A+ L+ N + + +
Sbjct: 77 LLDFNQSIKLNDKDYKAFMNRGNVRRETNDLKGALADYTQALPLNNNVPDLYLNRGVVNA 136
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
L N + AL+ +V+ +K+ AY+ RG +L+ + K+AI D + + +D + L
Sbjct: 137 QLQNYDAALKDFNEVIKRNKQNKNAYYNRGNILYTQKKFKEAIADFRTAVQLDARFAKAL 196
Query: 623 Y 623
Y
Sbjct: 197 Y 197
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG + A++ + Q L + P+ + RG A + +AA+ DF E I+
Sbjct: 95 MNRGNVRRETNDLKGALADYTQALPLNNNVPDLYLNRGVVNAQLQNYDAALKDFNEVIKR 154
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
N A+ RG + EAI D A++ + A L+ G+
Sbjct: 155 NKQNKNAYYNRGNILYTQKKFKEAIADFRTAVQLDARFAKALYALGM 201
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG+ Y +A+ F++++K + A RG Q++ + AI+DF A
Sbjct: 126 DLYLNRGVVNAQLQNYDAALKDFNEVIKRNKQNKNAYYNRGNILYTQKKFKEAIADFRTA 185
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+Q + +A G A + +A L +A AD
Sbjct: 186 VQLDARFAKALYALGMAELLADKKEDACMHLKQAANLNHPQAD 228
>gi|124024108|ref|YP_001018415.1| hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
9303]
gi|123964394|gb|ABM79150.1| Hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
9303]
Length = 733
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 7/262 (2%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S GI EG++ I+I ++ LK +P Y +A G A LEAA+ F +A+ N
Sbjct: 53 SLGIIYGIEGRWQELIAILEKALKLEPNYSDAHNYIGIALKRLDNLEAAVESFQKALSIN 112
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ ++ G A G+ AI L A++F+P+ ++ + GI + AA+
Sbjct: 113 PNCPKSNYNLGNALLEEGKLDSAIAFLKTAVDFKPDFSEAHYNLGIAYLAIDNIAAAINY 172
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ + L A+ LGLAL + GE A + +KA+++ F EA +L Y +
Sbjct: 173 LNNSLHLKPAFPEAHNSLGLALQAKGEKNLAISSFIKALEIKPEFPEACYNLGFIYLNQG 232
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ E A+ + L + + +A + G+ G+ AI L I E Y
Sbjct: 233 DIETAINYFNKALLLKWNYPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNL 292
Query: 626 ASCY-------HAIGEYREAVI 640
S Y AI +++A+I
Sbjct: 293 GSIYLDQGNIETAINFFKKALI 314
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 101/242 (41%), Gaps = 6/242 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A + EGK SAI+ + P + EA G A + AAI+ ++ P+
Sbjct: 123 GNALLEEGKLDSAIAFLKTAVDFKPDFSEAHYNLGIAYLAIDNIAAAINYLNNSLHLKPA 182
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA G A A GE AI KALE +P + + G + D A+ +
Sbjct: 183 FPEAHNSLGLALQAKGEKNLAISSFIKALEIKPEFPEACYNLGFIYLNQGDIETAINYFN 242
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ L A LG+A + GE A + KA+++ +F E + +L Y D N
Sbjct: 243 KALLLKWNYPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNI 302
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS------NIEC 621
E A+ ++ L + + + +A + G L G+ AI L PS N+ C
Sbjct: 303 ETAINFFKKALILKENYPEALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGC 362
Query: 622 LY 623
+Y
Sbjct: 363 VY 364
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 348 LSFKWDMLKETSN-----EAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYAS 399
L KW+ + +N +AK + K+ I DF + G +++G +
Sbjct: 245 LLLKWNYPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNIET 304
Query: 400 AISIFDQ--ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
AI+ F + ILKE+ YPEAL G + + EL+AAI+ + +A+ PS EA G
Sbjct: 305 AINFFKKALILKEN--YPEALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGC 362
Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
A G+ +I+ KAL P+ +IL G + D AA+ + + +
Sbjct: 363 VYRAQGDLENSIRIFKKALALHPDHPEILSNLGTSLEEKGDLEAAISSFNNAISNNSNYP 422
Query: 518 SAYTYLGLALSSIGEYKKAEEAH 540
+A+ L L L S G+Y + H
Sbjct: 423 TAHYNLSLCLLSKGDYHNGWQQH 445
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S G+A +G+ AIS F + L+ P +PEA G Q ++E AI+ F +A+
Sbjct: 189 SLGLALQAKGEKNLAISSFIKALEIKPEFPEACYNLGFIYLNQGDIETAINYFNKALLLK 248
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ EA G A A GE AI KALE + + ++ + G + + A+
Sbjct: 249 WNYPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINF 308
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ L + A LG +L GE A A+ KA+ ++ EA +L Y+
Sbjct: 309 FKKALILKENYPEALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQG 368
Query: 566 NSEKALECLQQVL 578
+ E ++ ++ L
Sbjct: 369 DLENSIRIFKKAL 381
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 9/251 (3%)
Query: 380 SVDFR-------LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+VDF+ + GIA + A+AI+ + L P +PEA G A + E
Sbjct: 142 AVDFKPDFSEAHYNLGIAYLAIDNIAAAINYLNNSLHLKPAFPEAHNSLGLALQAKGEKN 201
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
AIS F +A++ P EA G G+ AI +KAL + N + L+ GI
Sbjct: 202 LAISSFIKALEIKPEFPEACYNLGFIYLNQGDIETAINYFNKALLLKWNYPEALNNLGIA 261
Query: 493 NFKFK-DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
FK K + + A+ +++ + Y LG G + A KA+ L N+
Sbjct: 262 -FKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINFFKKALILKENYP 320
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
EA +L Q+ + A+ ++ L + +A + G + G + +I+
Sbjct: 321 EALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQGDLENSIRIFKKA 380
Query: 612 LGIDPSNIECL 622
L + P + E L
Sbjct: 381 LALHPDHPEIL 391
>gi|150401356|ref|YP_001325122.1| hypothetical protein Maeo_0930 [Methanococcus aeolicus Nankai-3]
gi|150014059|gb|ABR56510.1| TPR repeat-containing protein [Methanococcus aeolicus Nankai-3]
Length = 329
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 117/252 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + +Y AI D + +P A +G A ++ AI F +A+ NP
Sbjct: 9 GITLYGQRRYMDAIGAIDTAISINPKNSNAWKHKGIAFRKWKKYPNAIECFDKALNLNPK 68
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW +G + + EAI L K+LE PN+A + +G++ K++ + A+ +
Sbjct: 69 NSSAWMHKGVLYGKINKYEEAITCLDKSLELTPNNARVWIYKGVILRKWEKYEEAITYFN 128
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++++ ++ + + G+ S + +Y++A KA +++ + + ++L
Sbjct: 129 KALEINPKDARVWKHAGVLFSKLEKYEEALLCFNKATEVNPRVKQIFDEKGVVLENLGRY 188
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E+ALEC +L + + S +L+ +L + +++ A+ L I+P N +++
Sbjct: 189 EEALECYNILLNRNPKNSGILNLKIRVLRKMKRYEDALNCCDEVLNINPENKNTYFIKLQ 248
Query: 628 CYHAIGEYREAV 639
+ Y +A+
Sbjct: 249 ILRNLERYEDAL 260
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 12/260 (4%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GIA KY +AI FD+ L +P A + +G + E AI+ ++++ P
Sbjct: 42 KGIAFRKWKKYPNAIECFDKALNLNPKNSSAWMHKGVLYGKINKYEEAITCLDKSLELTP 101
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ W +G + EAI +KALE P A + G++ K + + A+
Sbjct: 102 NNARVWIYKGVILRKWEKYEEAITYFNKALEINPKDARVWKHAGVLFSKLEKYEEALLCF 161
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL---TQFYQD 563
+ +++ K + G+ L ++G Y++A E + I L+RN + G L + +
Sbjct: 162 NKATEVNPRVKQIFDEKGVVLENLGRYEEALECY--NILLNRNPKNS-GILNLKIRVLRK 218
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS----NI 619
+ E AL C +VL I+ Y ++ +L L +++ A+ L I S NI
Sbjct: 219 MKRYEDALNCCDEVLNINPENKNTYFIKLQILRNLERYEDALNCCDEVLNIISSSKKGNI 278
Query: 620 ECLYLRASCYHAIGEYREAV 639
++ ++ +GEY +A+
Sbjct: 279 --WNIKGDIFNDLGEYNKAI 296
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 2/234 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G+ KY AI+ D+ L+ P I +G + E AI+ F +A++
Sbjct: 74 MHKGVLYGKINKYEEAITCLDKSLELTPNNARVWIYKGVILRKWEKYEEAITYFNKALEI 133
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP WK G + L + EA+ +KA E P I E+G+V + A+E
Sbjct: 134 NPKDARVWKHAGVLFSKLEKYEEALLCFNKATEVNPRVKQIFDEKGVVLENLGRYEEALE 193
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + + +N L + Y+ A + + ++ + Q ++L
Sbjct: 194 CYNILLNRNPKNSGILNLKIRVLRKMKRYEDALNCCDEVLNINPENKNTYFIKLQILRNL 253
Query: 565 ANSEKALECLQQVLYIDKRFSKA--YHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
E AL C +VL I K ++++G + + LG++ KAI + L I+P
Sbjct: 254 ERYEDALNCCDEVLNIISSSKKGNIWNIKGDIFNDLGEYNKAIGCFNKALEINP 307
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 71/151 (47%)
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
GI + + + A+ + + ++ +N +A+ + G+A +Y A E KA+ L+
Sbjct: 9 GITLYGQRRYMDAIGAIDTAISINPKNSNAWKHKGIAFRKWKKYPNAIECFDKALNLNPK 68
Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
AW H Y + E+A+ CL + L + ++ + +G++L ++++AI +
Sbjct: 69 NSSAWMHKGVLYGKINKYEEAITCLDKSLELTPNNARVWIYKGVILRKWEKYEEAITYFN 128
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
L I+P + + + +Y EA++
Sbjct: 129 KALEINPKDARVWKHAGVLFSKLEKYEEALL 159
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 52/120 (43%)
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ +G+ L Y A A AI ++ AW H ++ A+EC + L
Sbjct: 5 WIKVGITLYGQRRYMDAIGAIDTAISINPKNSNAWKHKGIAFRKWKKYPNAIECFDKALN 64
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++ + S A+ +G+L + ++++AI L L + P+N + +Y EA+
Sbjct: 65 LNPKNSSAWMHKGVLYGKINKYEEAITCLDKSLELTPNNARVWIYKGVILRKWEKYEEAI 124
>gi|425468819|ref|ZP_18847804.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9701]
gi|389884522|emb|CCI35187.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9701]
Length = 707
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 123/245 (50%), Gaps = 1/245 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + + LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 347 RYTDALNSYGKALKINPDYLEALQGQADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 406
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A LG++ EA++ + L P ++ + + + + ++AA + L + K
Sbjct: 407 RGKALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQK 466
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ ++ + W L ALE
Sbjct: 467 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINDALESY 526
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + +FS+A++ +G++L LG++ +A++ + + + + + + H +
Sbjct: 527 SKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFNQATKANSNYYQAWLNQGALLHQLER 586
Query: 635 YREAV 639
++EA+
Sbjct: 587 FQEAI 591
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 119/254 (46%), Gaps = 12/254 (4%)
Query: 396 KYASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 381 RYSEALNTYEKAIQINPDSAWQAWLGRGKALDKLGKNQEALESFERVLSLNPAASQAWQG 440
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 441 KADIYLELQQYSAAQKALEKLLTFQKNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 500
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
+N + G +L + + A E++ KA Q + F +A H +Q Q L + +ALE
Sbjct: 501 DNALIWYQKGNSLYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLGRNSEALE 558
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY-LRASCY-- 629
Q + + +A+ +G LLH L + ++AI I E + +CY
Sbjct: 559 AFNQATKANSNYYQAWLNQGALLHQLERFQEAITSYEKARRISSQKAEVFIGIGNACYRL 618
Query: 630 ----HAIGEYREAV 639
AI Y++A+
Sbjct: 619 GDNSQAINAYQQAI 632
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 85/187 (45%), Gaps = 1/187 (0%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
++GQ L +A+ KAL+ P+ + L + K ++ A+ ++++
Sbjct: 337 QQGQTFYQLKRYTDALNSYGKALKINPDYLEALQGQADALLALKRYSEALNTYEKAIQIN 396
Query: 514 KENK-SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
++ A+ G AL +G+ ++A E+ + + L+ +AW Y +L A +
Sbjct: 397 PDSAWQAWLGRGKALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQK 456
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
L+++L K +K ++ +G L L ++ A+K L I+ N Y + + + +
Sbjct: 457 ALEKLLTFQKNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQL 516
Query: 633 GEYREAV 639
+ +A+
Sbjct: 517 NKINDAL 523
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 34/262 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A GK A+ F+++L +P +A G+ ++ AA + +
Sbjct: 405 LGRGKALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTF 464
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 465 QKNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINDALE 524
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L +G +A EA +A + + N+ +AW L
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFNQATKANSNYYQAWLNQGALLHQL 584
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + + + EKA + QQ + K + +
Sbjct: 585 ERFQEAITSYEKARRISSQKAEVFIGIGNACYRLGDNSQAINAYQQAIQRQKDNPETWKS 644
Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
G LGQ+++AI+ L
Sbjct: 645 LGNSWFKLGQYERAIQAYQESL 666
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 54/116 (46%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ F +A ++N + +AW +G L EAI KA A++ G
Sbjct: 556 ALEAFNQATKANSNYYQAWLNQGALLHQLERFQEAITSYEKARRISSQKAEVFIGIGNAC 615
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D + A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 616 YRLGDNSQAINAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSN 671
>gi|254409568|ref|ZP_05023349.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196183565|gb|EDX78548.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 861
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 8/235 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSN 445
RG+A +Y AI+ D+ L+ P P+ RG A R QR E A+ F + IQ
Sbjct: 605 RGVALWELQRYQDAIASLDRGLELAPEAPDTWYYRGLALRELQR-YEGALVAFNKVIQIQ 663
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +AW RG L +AI +ALE +P+ + RG+V + A
Sbjct: 664 PDDYKAWLNRGMMLGRLKRREDAIASFEQALEIKPDYHEAWVNRGVVLGALQQHEEAYNS 723
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
V++ ++ A+ GLAL+ + Y++A + KAI+L +AW + L
Sbjct: 724 FDKAVQVQPDDGIAWFNRGLALAVLERYEEAVTSFEKAIELKPESHKAWTYKGNMLLKLK 783
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA---IKDLSSGLGIDPS 617
++ALE Q L I ++ A++ + + G ++A I +L + ++P+
Sbjct: 784 REQEALESYDQALAIQPDYAPAFYQKAI---GYAHQRQAHFSIDNLEKAIALNPA 835
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
A G+ EAI +ALE +P++A++ H+RG+ ++ + + A+ L ++L E +
Sbjct: 577 AQGDYEEAIARYDQALELQPDNANLWHQRGVALWELQRYQDAIASLDRGLELAPEAPDTW 636
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
Y GLAL + Y+ A A K IQ+ + +AW + L E A+ +Q L I
Sbjct: 637 YYRGLALRELQRYEGALVAFNKVIQIQPDDYKAWLNRGMMLGRLKRREDAIASFEQALEI 696
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +A+ RG++L L QH++A + + P + + R + Y EAV
Sbjct: 697 KPDYHEAWVNRGVVLGALQQHEEAYNSFDKAVQVQPDDGIAWFNRGLALAVLERYEEAV 755
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 103/236 (43%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G Y AI+ +DQ L+ P RG A + + AI+ ++ P A + W
Sbjct: 578 QGDYEEAIARYDQALELQPDNANLWHQRGVALWELQRYQDAIASLDRGLELAPEAPDTWY 637
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A L A+ +K ++ +P+ RG++ + K A+ +++
Sbjct: 638 YRGLALRELQRYEGALVAFNKVIQIQPDDYKAWLNRGMMLGRLKRREDAIASFEQALEIK 697
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ A+ G+ L ++ ++++A + KA+Q+ + AW + L E+A+
Sbjct: 698 PDYHEAWVNRGVVLGALQQHEEAYNSFDKAVQVQPDDGIAWFNRGLALAVLERYEEAVTS 757
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
++ + + KA+ +G +L L + ++A++ L I P Y +A Y
Sbjct: 758 FEKAIELKPESHKAWTYKGNMLLKLKREQEALESYDQALAIQPDYAPAFYQKAIGY 813
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG+ ++ A + FD+ ++ P A RG A A E A++ F +AI+
Sbjct: 705 VNRGVVLGALQQHEEAYNSFDKAVQVQPDDGIAWFNRGLALAVLERYEEAVTSFEKAIEL 764
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
P + +AW +G L EA++ +AL +P+ A +++ I
Sbjct: 765 KPESHKAWTYKGNMLLKLKREQEALESYDQALAIQPDYAPAFYQKAI 811
>gi|384214436|ref|YP_005605599.1| hypothetical protein BJ6T_07170 [Bradyrhizobium japonicum USDA 6]
gi|354953332|dbj|BAL06011.1| hypothetical protein BJ6T_07170 [Bradyrhizobium japonicum USDA 6]
Length = 370
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 133/280 (47%), Gaps = 4/280 (1%)
Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
KR+K S + I +F + RG A +G+ A++ +++ ++ DP Y +
Sbjct: 62 KRDKDRAFEDCSAAIRIDPNFGRAYNCRGRAYSAKGERDRALADYNEAIRLDPGYGPSYT 121
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
R +R+ + AI+ FTEA++ NP A A RG+A AA G++ A+ D +A+
Sbjct: 122 SRALEYFNKRDFDLAITAFTEAVERNPKQAYFAIVMRGEAYAAKGDTDRAVADYDEAMRR 181
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
P++A R +F+ +F+AA++D ++ V+L+ ++ + + L + A
Sbjct: 182 NPSAAWPYELRSTAHFEKGEFDAALDDCNSAVRLEPKSAGGHYCRAVVLLKKDDADGAIR 241
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ ++ F++A+ + + + A+ + + + S AY+ R +
Sbjct: 242 EFDEVTRIAPAFVKAYLARAVAWHKKGDDKHAIADFDEAIRLQPGNSTAYNNRAAAFRDM 301
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
G+H +A+ D + + +DP+N L R Y + + + A
Sbjct: 302 GEHDRALADYNEAIRLDPNNQVALVNRGLLYMKLSDAKHA 341
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 1/234 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAIQS 444
SR + N+ + AI+ F + ++ +P A++ RG A A + + + A++D+ EA++
Sbjct: 122 SRALEYFNKRDFDLAITAFTEAVERNPKQAYFAIVMRGEAYAAKGDTDRAVADYDEAMRR 181
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NPSA ++ R A GE A+ D + A+ EP SA + R +V K D + A+
Sbjct: 182 NPSAAWPYELRSTAHFEKGEFDAALDDCNSAVRLEPKSAGGHYCRAVVLLKKDDADGAIR 241
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++ AY +A G+ K A +AI+L A+ + ++D+
Sbjct: 242 EFDEVTRIAPAFVKAYLARAVAWHKKGDDKHAIADFDEAIRLQPGNSTAYNNRAAAFRDM 301
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++AL + + +D A RGLL L K A D +S L + P +
Sbjct: 302 GEHDRALADYNEAIRLDPNNQVALVNRGLLYMKLSDAKHARADFNSVLALPPGD 355
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 5/195 (2%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS+ TE I ++P+ A++ RG+A + A +D S A+ +PN + RG
Sbjct: 35 ISEKTEIIAADPTNAVAYELRGEAWHLKRDKDRAFEDCSAAIRIDPNFGRAYNCRGRAYS 94
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ + A+ D + ++LD +YT L + ++ A A +A++ RN +A+
Sbjct: 95 AKGERDRALADYNEAIRLDPGYGPSYTSRALEYFNKRDFDLAITAFTEAVE--RNPKQAY 152
Query: 555 GHLT---QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ + Y ++++A+ + + + + Y LR G+ A+ D +S
Sbjct: 153 FAIVMRGEAYAAKGDTDRAVADYDEAMRRNPSAAWPYELRSTAHFEKGEFDAALDDCNSA 212
Query: 612 LGIDPSNIECLYLRA 626
+ ++P + Y RA
Sbjct: 213 VRLEPKSAGGHYCRA 227
>gi|254409523|ref|ZP_05023304.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196183520|gb|EDX78503.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 385
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 114/235 (48%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+I+++ S + L++G++ + G YA A+ +DQ ++ + +A +GRG A +
Sbjct: 46 PQIAQTPSRELVNWLNKGMSLIKAGNYAEAVKAYDQAIEINGESADAWMGRGFALYGLEK 105
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
A++ F +A + +PS AW G A G+ +A+ +AL+ PNS RG
Sbjct: 106 YPEAVTAFNQATELDPSLVGAWVGLGMALDDTGKPEDALAAYDQALKVNPNSDWAWFHRG 165
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
I + + A+E V++D + + A+ G L + Y +AE + + ++++ N
Sbjct: 166 ITLGRLERDQEALEAYDQAVRIDPDYERAWFNRGYILVELERYPEAETSFAEVVRINPNS 225
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
W ++ + AL+ ++VL I+ + A++ +G++L L AI
Sbjct: 226 EPGWFMRGLALLEMEQNNTALKAFERVLLINPENANAWYNKGIILENLDGDDWAI 280
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEA-WKRRGQARAALGESVEAIQDLSKALEFEP 480
GT + ELE I PS W +G + G EA++ +A+E
Sbjct: 34 GTPNPYMLELE------NPQIAQTPSRELVNWLNKGMSLIKAGNYAEAVKAYDQAIEING 87
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
SAD RG + + + AV + +LD A+ LG+AL G+ + A A+
Sbjct: 88 ESADAWMGRGFALYGLEKYPEAVTAFNQATELDPSLVGAWVGLGMALDDTGKPEDALAAY 147
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+A++++ N AW H L ++ALE Q + ID + +A+ RG +L L +
Sbjct: 148 DQALKVNPNSDWAWFHRGITLGRLERDQEALEAYDQAVRIDPDYERAWFNRGYILVELER 207
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRA 626
+ +A + + I+P++ ++R
Sbjct: 208 YPEAETSFAEVVRINPNSEPGWFMRG 233
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 114/261 (43%), Gaps = 1/261 (0%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S D + RG A KY A++ F+Q + DP A +G G A + E A++ +
Sbjct: 89 SADAWMGRGFALYGLEKYPEAVTAFNQATELDPSLVGAWVGLGMALDDTGKPEDALAAYD 148
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+A++ NP++ AW RG L EA++ +A+ +P+ RG + + + +
Sbjct: 149 QALKVNPNSDWAWFHRGITLGRLERDQEALEAYDQAVRIDPDYERAWFNRGYILVELERY 208
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A + V+++ ++ + GLAL + + A +A + + ++ AW +
Sbjct: 209 PEAETSFAEVVRINPNSEPGWFMRGLALLEMEQNNTALKAFERVLLINPENANAWYNKGI 268
Query: 560 FYQDLANSEKAL-ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++L + A+ +V+ + + + RG L L ++ A+ L ++P +
Sbjct: 269 ILENLDGDDWAIFTVFDRVVQLIPDDAGGWFKRGNALLRLDRYADALNSYDRMLELEPDS 328
Query: 619 IECLYLRASCYHAIGEYREAV 639
Y R + Y +A+
Sbjct: 329 EVGWYNRGIALALLERYHDAI 349
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%)
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
+G+ K ++ AV+ ++++ E+ A+ G AL + +Y +A A +A +LD
Sbjct: 62 KGMSLIKAGNYAEAVKAYDQAIEINGESADAWMGRGFALYGLEKYPEAVTAFNQATELDP 121
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ + AW L D E AL Q L ++ A+ RG+ L L + ++A++
Sbjct: 122 SLVGAWVGLGMALDDTGKPEDALAAYDQALKVNPNSDWAWFHRGITLGRLERDQEALEAY 181
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREA 638
+ IDP + R + Y EA
Sbjct: 182 DQAVRIDPDYERAWFNRGYILVELERYPEA 211
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 37/203 (18%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSN 445
RGI + A+ +DQ ++ DP Y A RG +R EA S F E ++ N
Sbjct: 164 RGITLGRLERDQEALEAYDQAVRIDPDYERAWFNRGYILVELERYPEAETS-FAEVVRIN 222
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV------------- 492
P++ W RG A + ++ A++ + L P +A+ + +GI+
Sbjct: 223 PNSEPGWFMRGLALLEMEQNNTALKAFERVLLINPENANAWYNKGIILENLDGDDWAIFT 282
Query: 493 -------------NFKFKDFNA---------AVEDLSACVKLDKENKSAYTYLGLALSSI 530
FK NA A+ ++L+ +++ + G+AL+ +
Sbjct: 283 VFDRVVQLIPDDAGGWFKRGNALLRLDRYADALNSYDRMLELEPDSEVGWYNRGIALALL 342
Query: 531 GEYKKAEEAHLKAIQLDRNFLEA 553
Y A + +A++++ N EA
Sbjct: 343 ERYHDAIASFDEALRINPNNTEA 365
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 46 LCSLRNWSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
L N+++A++ D + + E D R F LE + + ++A +LDP+L+
Sbjct: 66 LIKAGNYAEAVKAYDQAIEINGESADAWMGRGFALYGLEKYPEAVTAFNQATELDPSLVG 125
Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHAL 134
A++ G A G+ E+AL+ Y+ AL
Sbjct: 126 AWVGLGMALDDTGKPEDALA----AYDQAL 151
>gi|148558498|ref|YP_001257882.1| hypothetical protein BOV_A0905 [Brucella ovis ATCC 25840]
gi|148369783|gb|ABQ62655.1| TPR domain protein [Brucella ovis ATCC 25840]
Length = 295
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A +Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 86 RGSAYGKARRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 145
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ D ++A+ H RG++ ++ K + A+ED
Sbjct: 146 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 204
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G+Y A + AI LD+N E+W + Y+
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNG 264
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 265 DKAKAANSYARAVQLDPKYKPA 286
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 83/204 (40%), Gaps = 34/204 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A EA++D +A+ PN R +V+
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKARRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 161
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
GHL Q AL Q + + +AYH RGL+ G HK+AI+D S + +
Sbjct: 162 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 211
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
+ + E R Y A+G+Y A
Sbjct: 212 NSTAPEPYNGRGISYVALGDYDNA 235
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
IS +++ +P PE RG+A R + A+ DF +AI NP+ +A+ R
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKARRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+G++ +A+QD S+A++ P RG V + + A+ D + + L + AY
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAY 185
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL + G +K+A E KAI L+ E + Y L + + A + + +
Sbjct: 186 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 245
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
D+ ++++ + L+ G KA + + +DP
Sbjct: 246 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 281
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ + + ++ +P Y A IGRG L+ A++DF +AI + G A+ RG
Sbjct: 133 AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIY 192
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
A G +AI+D SKA+ + + + RGI D++ A +D + + LD+ +
Sbjct: 193 QAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAES 252
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA-------WG 555
+ L G+ KA ++ +A+QLD + A WG
Sbjct: 253 WANQALVYEHNGDKAKAANSYARAVQLDPKYKPAKDGLARTWG 295
>gi|254417473|ref|ZP_05031213.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196175738|gb|EDX70762.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 355
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 108/244 (44%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA G++ AI+ +D+ +K P + A RG A ++ EAA + +A+
Sbjct: 64 NRGIALDKAGRHEEAIASYDKAVKLQPDFYPAWYNRGNALVNLKQYEAAKLSYDQALNLK 123
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ +AW RG +L +EAI AL+ +P+ + + +G K F A+
Sbjct: 124 PNLHQAWYNRGNVLFSLQRFLEAITSYQDALKIKPDKYEAWYNQGHAWVHLKQFQEAIAS 183
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+K+ + A+ G AL + + +A ++ +A++L +W + +L
Sbjct: 184 YDEALKIKPDAHEAWNNRGGALYRLDRFPEAVASYNEALKLKYQQPSSWYYRGNALVNLR 243
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ A+ + L I +A++ RG L LG + A+ + N Y +
Sbjct: 244 YFQDAVASYDEALKIKPDKYEAWYNRGYALLQLGDYPGALASFDKTIEFKSDNANAFYNK 303
Query: 626 ASCY 629
A CY
Sbjct: 304 ACCY 307
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 109/252 (43%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI + G++ AI+ DQ+L+ +P + RG A E AI+ + +A++ P
Sbjct: 32 GIILIQSGQFEEAIATVDQVLEREPDLYQLWYNRGIALDKAGRHEEAIASYDKAVKLQPD 91
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
AW RG A L + A +AL +PN + RG V F + F A+
Sbjct: 92 FYPAWYNRGNALVNLKQYEAAKLSYDQALNLKPNLHQAWYNRGNVLFSLQRFLEAITSYQ 151
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+K+ + A+ G A + ++++A ++ +A+++ + EAW + L
Sbjct: 152 DALKIKPDKYEAWYNQGHAWVHLKQFQEAIASYDEALKIKPDAHEAWNNRGGALYRLDRF 211
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+A+ + L + + +++ RG L L + A+ L I P E Y R
Sbjct: 212 PEAVASYNEALKLKYQQPSSWYYRGNALVNLRYFQDAVASYDEALKIKPDKYEAWYNRGY 271
Query: 628 CYHAIGEYREAV 639
+G+Y A+
Sbjct: 272 ALLQLGDYPGAL 283
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 5/252 (1%)
Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ K+ + DF +RG A VN +Y +A +DQ L P +A RG
Sbjct: 78 AIASYDKAVKLQPDFYPAWYNRGNALVNLKQYEAAKLSYDQALNLKPNLHQAWYNRGNVL 137
Query: 426 -AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
+ QR LEA I+ + +A++ P EAW +G A L + EAI +AL+ +P++ +
Sbjct: 138 FSLQRFLEA-ITSYQDALKIKPDKYEAWYNQGHAWVHLKQFQEAIASYDEALKIKPDAHE 196
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ RG ++ F AV + +KL + S++ Y G AL ++ ++ A ++ +A+
Sbjct: 197 AWNNRGGALYRLDRFPEAVASYNEALKLKYQQPSSWYYRGNALVNLRYFQDAVASYDEAL 256
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
++ + EAW + L + AL + + + A++ + G A
Sbjct: 257 KIKPDKYEAWYNRGYALLQLGDYPGALASFDKTIEFKSDNANAFYNKACCYALQGNVDLA 316
Query: 605 IKDLSSGLGIDP 616
I++L L ++P
Sbjct: 317 IENLQKTLNLNP 328
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
EAW G G+ EAI + + LE EP+ + + RGI K A+
Sbjct: 26 EAWYNLGIILIQSGQFEEAIATVDQVLEREPDLYQLWYNRGIALDKAGRHEEAIASYDKA 85
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
VKL + A+ G AL ++ +Y+ A+ ++ +A+ L N +AW + L +
Sbjct: 86 VKLQPDFYPAWYNRGNALVNLKQYEAAKLSYDQALNLKPNLHQAWYNRGNVLFSLQRFLE 145
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
A+ Q L I +A++ +G L Q ++AI L I P E R
Sbjct: 146 AITSYQDALKIKPDKYEAWYNQGHAWVHLKQFQEAIASYDEALKIKPDAHEAWNNRGGAL 205
Query: 630 HAIGEYREAV 639
+ + + EAV
Sbjct: 206 YRLDRFPEAV 215
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 63/130 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A ++ A++ +++ LK P + RG A R + A++ + EA++
Sbjct: 200 NRGGALYRLDRFPEAVASYNEALKLKYQQPSSWYYRGNALVNLRYFQDAVASYDEALKIK 259
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P EAW RG A LG+ A+ K +EF+ ++A+ + + + + A+E+
Sbjct: 260 PDKYEAWYNRGYALLQLGDYPGALASFDKTIEFKSDNANAFYNKACCYALQGNVDLAIEN 319
Query: 506 LSACVKLDKE 515
L + L+ +
Sbjct: 320 LQKTLNLNPD 329
>gi|443327964|ref|ZP_21056570.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
gi|442792468|gb|ELS01949.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
Length = 774
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 111/235 (47%), Gaps = 1/235 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF +++G + + Y AI++FDQ L+ P +A RG A + E AI+ F +A
Sbjct: 525 DF-IAQGNQLLEQENYQEAIALFDQALELQPENAQAWNQRGIALRDLKRYEGAIAAFGKA 583
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ PS EAW RG + + +AI + KA+ +P+ +RG+ +
Sbjct: 584 LKIQPSFAEAWCNRGITYSRMKRYQDAIANYDKAVAIQPDYYQAWVDRGVAFGMLRRHEP 643
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A E V++ N A+ G++L + +++ + KA++L+ +AW +
Sbjct: 644 AFESFDHAVEVQPGNAVAWMNRGMSLEMLSRDEESLASFDKAVELNPKLAKAWNYRGNIL 703
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
L E AL + L + +++AY+ R + Q + AIK+L + ++P
Sbjct: 704 IKLEEYEAALVSCDRTLELQSDYAQAYYNRAICYAMFNQVELAIKNLKQAVKLNP 758
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 123/266 (46%), Gaps = 15/266 (5%)
Query: 389 IAQVNEGKY-ASAISIFDQ----------ILKED-PMY---PEALIGRGTARAFQRELEA 433
+AQ+ ++ A+A+S +Q IL+++ P + P+ I +G Q +
Sbjct: 482 LAQITPQEFSATALSQIEQDIQTLREPLEILQQNQPQWFQKPDDFIAQGNQLLEQENYQE 541
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI+ F +A++ P +AW +RG A L AI KAL+ +P+ A+ RGI
Sbjct: 542 AIALFDQALELQPENAQAWNQRGIALRDLKRYEGAIAAFGKALKIQPSFAEAWCNRGITY 601
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+ K + A+ + V + + A+ G+A + ++ A E+ A+++ A
Sbjct: 602 SRMKRYQDAIANYDKAVAIQPDYYQAWVDRGVAFGMLRRHEPAFESFDHAVEVQPGNAVA 661
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
W + + L+ E++L + + ++ + +KA++ RG +L L +++ A+ L
Sbjct: 662 WMNRGMSLEMLSRDEESLASFDKAVELNPKLAKAWNYRGNILIKLEEYEAALVSCDRTLE 721
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
+ + Y RA CY + A+
Sbjct: 722 LQSDYAQAYYNRAICYAMFNQVELAI 747
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 75/174 (43%)
Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
EAI +ALE +P +A ++RGI K + A+ +K+ A+ G+
Sbjct: 541 EAIALFDQALELQPENAQAWNQRGIALRDLKRYEGAIAAFGKALKIQPSFAEAWCNRGIT 600
Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
S + Y+ A + KA+ + ++ +AW + L E A E + + +
Sbjct: 601 YSRMKRYQDAIANYDKAVAIQPDYYQAWVDRGVAFGMLRRHEPAFESFDHAVEVQPGNAV 660
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
A+ RG+ L L + ++++ + ++P + R + + EY A++
Sbjct: 661 AWMNRGMSLEMLSRDEESLASFDKAVELNPKLAKAWNYRGNILIKLEEYEAALV 714
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 52 WSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGC 111
+ KA++I S A+++ CNR YS+++ ++ I + DKA+ + P QA++ +G
Sbjct: 580 FGKALKIQPSF-AEAW-----CNRGITYSRMKRYQDAIANYDKAVAIQPDYYQAWVDRGV 633
Query: 112 AFSALGRKEEALSVWEKGYEHALH 135
AF L R E A + ++HA+
Sbjct: 634 AFGMLRRHEPAF----ESFDHAVE 653
>gi|440703720|ref|ZP_20884640.1| tetratricopeptide repeat protein [Streptomyces turgidiscabies Car8]
gi|440274727|gb|ELP63235.1| tetratricopeptide repeat protein [Streptomyces turgidiscabies Car8]
Length = 747
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 110/261 (42%), Gaps = 18/261 (6%)
Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
R+ RG G Y A+ ++Q L DP A GRG RA QR+ AAI+D A +
Sbjct: 192 RMLRGRELRLSGAYERALGEYEQALALDPELERAYYGRGVTRAEQRDYAAAITDLDRADE 251
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P RG LG EA++DL +A+ P+ A RG+ D A+
Sbjct: 252 LAPDTARVLFVRGDYHRILGHHEEAVRDLDRAVALGPDLAGAWASRGVTRHGTGDIEQAL 311
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-----GHLT 558
DL ++LD E+ A S E+ + +A+ L AW G
Sbjct: 312 ADLDRALELDPEHVWALVRRARVHRSREEHDRQFADLDRAVALGPEL--AWVSCQRGDAL 369
Query: 559 QF----YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ + LA+ ++ALE +D ++ AY RG+ LG+H+ + DL L +
Sbjct: 370 RVAGRDTEALADYDRALE-------LDPAYASAYASRGVSRSRLGRHEGGLADLDRALAL 422
Query: 615 DPSNIECLYLRASCYHAIGEY 635
P+ L R+ + EY
Sbjct: 423 HPAYPWALVQRSVVHRKTDEY 443
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 105/263 (39%), Gaps = 20/263 (7%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ + G A++ D+ L+ DP + AL+ R + E + +D A+
Sbjct: 296 SRGVTRHGTGDIEQALADLDRALELDPEHVWALVRRARVHRSREEHDRQFADLDRAVALG 355
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +RG A G EA+ D +ALE +P A RG+ + + D
Sbjct: 356 PELAWVSCQRGDALRVAGRDTEALADYDRALELDPAYASAYASRGVSRSRLGRHEGGLAD 415
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L + L A + EY+ + E +A++L+ AW L
Sbjct: 416 LDRALALHPAYPWALVQRSVVHRKTDEYEASYEDADRAVELEPE--SAWA--------LW 465
Query: 566 NSEKALECLQQV----LYIDKRFS------KAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
N +AL CL + + +D+ S A RG +LH L + +A+ DL + +D
Sbjct: 466 NRGEALRCLGRFEEARVDLDRALSLFPGSVWAVGCRGAVLHELRLYGEALDDLDRAVTLD 525
Query: 616 PSNIECLYLRASCYHAIGEYREA 638
P L R A+G +A
Sbjct: 526 PDGAWHLMRRIMTLLAVGRPEDA 548
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 43/184 (23%)
Query: 455 RGQARAAL---------GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
RGQA A + G A+ + +AL +P + RG+ + +D+ AA+ D
Sbjct: 186 RGQAVARMLRGRELRLSGAYERALGEYEQALALDPELERAYYGRGVTRAEQRDYAAAITD 245
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L +L + G +++ L
Sbjct: 246 LDRADELAPDTARVLFVRG----------------------------------DYHRILG 271
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ E+A+ L + + + + A+ RG+ HG G ++A+ DL L +DP ++ L R
Sbjct: 272 HHEEAVRDLDRAVALGPDLAGAWASRGVTRHGTGDIEQALADLDRALELDPEHVWALVRR 331
Query: 626 ASCY 629
A +
Sbjct: 332 ARVH 335
>gi|306838683|ref|ZP_07471519.1| TPR domain-containing protein [Brucella sp. NF 2653]
gi|306406326|gb|EFM62569.1| TPR domain-containing protein [Brucella sp. NF 2653]
Length = 283
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 74 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 133
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ + ++A+ H RG++ ++ K + A+ED
Sbjct: 134 QYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 192
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G++ A + AI LD+N E+W + Y+
Sbjct: 193 FSKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITLDQNVAESWANQALVYEHNG 252
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 253 DKAKAANSYARAVQLDPKYKPA 274
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 83/204 (40%), Gaps = 34/204 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 54 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 149
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
G L Q AL Q + + +AYH RGL+ G HK+AI+D S + +
Sbjct: 150 GRLDQ----------ALNNFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 199
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
+ + E R Y A+G++ A
Sbjct: 200 NSTAPEPYNGRGISYVALGDFDNA 223
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
IS +++ +P PE RG+A + A+ DF +AI NP+ +A+ R
Sbjct: 54 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+G++ +A+QD S+A++ P RG V + + A+ + + + L + AY
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAY 173
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL + G +K+A E KAI L+ E + Y L + + A + + +
Sbjct: 174 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITL 233
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
D+ ++++ + L+ G KA + + +DP
Sbjct: 234 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 269
>gi|145537956|ref|XP_001454689.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422455|emb|CAK87292.1| unnamed protein product [Paramecium tetraurelia]
Length = 432
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
+++ K V+F + G+A N Y A+ FDQ +K + Y +AL +G A
Sbjct: 200 SQVYNLKGKFVNFLV--GMALRNLNHYQEALECFDQAIKINSSYSDALNNKGNALFNMCH 257
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
+AA+ + +AI+ N + +A +G L +AI+ +A++ PN + ++ +G
Sbjct: 258 YQAALQCYDQAIRINSNDSDACYNKGNTLFILNRYQDAIESYDQAIKINPNYIEAIYNKG 317
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
I F F A+E + +D AY G+AL ++ Y++A + + +A +++ N
Sbjct: 318 IALFNLNRFQDAIECYDHVIAIDSNYNDAYYNKGIALFNLNRYQEALDCYDQATRINPNQ 377
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A+ + L E+ALEC Q ID S +++ +G L
Sbjct: 378 SDAFYNKGNALYILKRYEEALECYNQSNKIDINDSDSFYNKGKL 421
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ------- 457
DQ+ +D MY EA+I F +++ + + + + +G+
Sbjct: 174 DQLFDQD-MYKEAIIL-----------------FDDSLNYDCNQSQVYNLKGKFVNFLVG 215
Query: 458 -ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
A L EA++ +A++ + +D L+ +G F + AA++ ++++ +
Sbjct: 216 MALRNLNHYQEALECFDQAIKINSSYSDALNNKGNALFNMCHYQAALQCYDQAIRINSND 275
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
A G L + Y+ A E++ +AI+++ N++EA + +L + A+EC
Sbjct: 276 SDACYNKGNTLFILNRYQDAIESYDQAIKINPNYIEAIYNKGIALFNLNRFQDAIECYDH 335
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
V+ ID ++ AY+ +G+ L L ++++A+ I+P+ + Y + + + + Y
Sbjct: 336 VIAIDSNYNDAYYNKGIALFNLNRYQEALDCYDQATRINPNQSDAFYNKGNALYILKRYE 395
Query: 637 EAV 639
EA+
Sbjct: 396 EAL 398
>gi|373499196|ref|ZP_09589689.1| hypothetical protein HMPREF0402_03562 [Fusobacterium sp. 12_1B]
gi|371959573|gb|EHO77258.1| hypothetical protein HMPREF0402_03562 [Fusobacterium sp. 12_1B]
Length = 246
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E RG+ + + E A+ DF +AI+ N A+ RG + +L +AI D +KA
Sbjct: 38 EIYYNRGSNKYKLNDYEGAMLDFNKAIELNSDFTYAYVFRGLVKDSLKNFEDAILDYNKA 97
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ +P A + RG+V + K + A+ D + ++LD E AY G A +S+ +Y +
Sbjct: 98 IKLDPKYALTYYNRGVVKNELKQYKEAILDYNKAIELDSEYAKAYNNRGSAQNSLKKYNE 157
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A KAI+LD A+ + DL N A+ + + ++ +F+KAY+ RGL
Sbjct: 158 AILDFNKAIELDPENSSAYYNRGIAKHDLKNYIGAILDYHKAIKLNPKFAKAYYNRGLAR 217
Query: 596 HGLGQHKKAIKDLSSGLGIDP 616
+ L + A D ++P
Sbjct: 218 YKLKNYIGANSDFKKANELNP 238
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKED 411
E SNE ++ T IS SVDF+ +RG + Y A+ F++ ++ +
Sbjct: 19 EKSNEKEK------TEIS-----SVDFKEAEIYYNRGSNKYKLNDYEGAMLDFNKAIELN 67
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
+ A + RG + + E AI D+ +AI+ +P + RG + L + EAI D
Sbjct: 68 SDFTYAYVFRGLVKDSLKNFEDAILDYNKAIKLDPKYALTYYNRGVVKNELKQYKEAILD 127
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+KA+E + A + RG K +N A+ D + ++LD EN SAY G+A +
Sbjct: 128 YNKAIELDSEYAKAYNNRGSAQNSLKKYNEAILDFNKAIELDPENSSAYYNRGIAKHDLK 187
Query: 532 EYKKAEEAHLKAIQLDRNFLEAW 554
Y A + KAI+L+ F +A+
Sbjct: 188 NYIGAILDYHKAIKLNPKFAKAY 210
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Query: 373 ISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
+K+ ++ DF + RG+ + + + AI +++ +K DP Y RG + +
Sbjct: 60 FNKAIELNSDFTYAYVFRGLVKDSLKNFEDAILDYNKAIKLDPKYALTYYNRGVVKNELK 119
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
+ + AI D+ +AI+ + +A+ RG A+ +L + EAI D +KA+E +P ++ + R
Sbjct: 120 QYKEAILDYNKAIELDSEYAKAYNNRGSAQNSLKKYNEAILDFNKAIELDPENSSAYYNR 179
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
GI K++ A+ D +KL+ + AY GLA + Y A KA +L+
Sbjct: 180 GIAKHDLKNYIGAILDYHKAIKLNPKFAKAYYNRGLARYKLKNYIGANSDFKKANELN 237
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
K F + +K+I +D + + RG+ + +Y AI +++ ++ D Y +A
Sbjct: 85 KNFEDAILDYNKAIKLDPKYALTYYNRGVVKNELKQYKEAILDYNKAIELDSEYAKAYNN 144
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG+A+ ++ AI DF +AI+ +P A+ RG A+ L + AI D KA++ P
Sbjct: 145 RGSAQNSLKKYNEAILDFNKAIELDPENSSAYYNRGIAKHDLKNYIGAILDYHKAIKLNP 204
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
A + RG+ +K K++ A D +L+ E K+ Y
Sbjct: 205 KFAKAYYNRGLARYKLKNYIGANSDFKKANELNPELKNPY 244
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 79/158 (50%)
Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
A+I + RG +K D+ A+ D + ++L+ + AY + GL S+ ++ A + K
Sbjct: 37 AEIYYNRGSNKYKLNDYEGAMLDFNKAIELNSDFTYAYVFRGLVKDSLKNFEDAILDYNK 96
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI+LD + + + +L ++A+ + + +D ++KAY+ RG + L ++
Sbjct: 97 AIKLDPKYALTYYNRGVVKNELKQYKEAILDYNKAIELDSEYAKAYNNRGSAQNSLKKYN 156
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+AI D + + +DP N Y R H + Y A++
Sbjct: 157 EAILDFNKAIELDPENSSAYYNRGIAKHDLKNYIGAIL 194
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 30/190 (15%)
Query: 9 SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRN-------WSKAIRILDS 61
++Y+LN + + ++ + ++S A R L K SL+N ++KAI+ LD
Sbjct: 46 NKYKLNDYEGAMLDFNKAIELNSDFTYAYVFR-GLVK-DSLKNFEDAILDYNKAIK-LDP 102
Query: 62 LLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
A +Y NR ++L+ +K I D +KA++LD +AY +G A ++L + E
Sbjct: 103 KYALTY-----YNRGVVKNELKQYKEAILDYNKAIELDSEYAKAYNNRGSAQNSLKKYNE 157
Query: 122 ALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNA 181
A+ D + +EL+ ++A +R + ++D+ N + ++ +
Sbjct: 158 AI--------------LDFNKAIELDPENSSAYYNRGI-AKHDLKNYIGAILDYHKAIKL 202
Query: 182 NDKMSETSEN 191
N K ++ N
Sbjct: 203 NPKFAKAYYN 212
>gi|187779400|ref|ZP_02995873.1| hypothetical protein CLOSPO_02996 [Clostridium sporogenes ATCC
15579]
gi|187773025|gb|EDU36827.1| tetratricopeptide repeat protein [Clostridium sporogenes ATCC
15579]
Length = 268
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 34/213 (15%)
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ +++ I +T +I+ PS +A+ R + L E ++I+D SK LE +P D
Sbjct: 51 YSSDIKEKIKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYSKILELDPKDKDCY 110
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ R IV + KD++ A++DL V +DK K+ Y G+ I +YK+A KAI
Sbjct: 111 NNRAIVYYLIKDYDKALQDLDKLVSIDKHYKNIYFNRGMVFLEIEDYKRAAIEFTKAIHE 170
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
D R S+AY R + L ++ +IK
Sbjct: 171 DS----------------------------------RDSEAYENRAFAYYNLKKYSPSIK 196
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D ++ L + P N R + Y+ + Y A+
Sbjct: 197 DYTNALKLKPENKNIYLNRGTMYYKMKSYENAI 229
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 395 GKYAS----AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
G Y+S I + +K P + +A R E +I D+++ ++ +P +
Sbjct: 49 GYYSSDIKEKIKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYSKILELDPKDKD 108
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
+ R + + +A+QDL K + + + +I RG+V + +D+ A + + +
Sbjct: 109 CYNNRAIVYYLIKDYDKALQDLDKLVSIDKHYKNIYFNRGMVFLEIEDYKRAAIEFTKAI 168
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
D + AY A ++ +Y + + + A++L
Sbjct: 169 HEDSRDSEAYENRAFAYYNLKKYSPSIKDYTNALKL 204
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 77/186 (41%), Gaps = 1/186 (0%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
S++ K KF I K K +D +R +Y +I + +IL+ DP +
Sbjct: 52 SSDIKEKIKFYTISI-KLKPSFIDAYFNRAELYKELEEYNKSIEDYSKILELDPKDKDCY 110
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
R ++ + A+ D + + + + RG + + A + +KA+
Sbjct: 111 NNRAIVYYLIKDYDKALQDLDKLVSIDKHYKNIYFNRGMVFLEIEDYKRAAIEFTKAIHE 170
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+ ++ R + K ++ +++D + +KL ENK+ Y G + Y+ A
Sbjct: 171 DSRDSEAYENRAFAYYNLKKYSPSIKDYTNALKLKPENKNIYLNRGTMYYKMKSYENAIS 230
Query: 539 AHLKAI 544
++KA+
Sbjct: 231 DYMKAL 236
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%)
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
+I+L +F++A+ + + Y++L K++E ++L +D + Y+ R ++ + + +
Sbjct: 65 SIKLKPSFIDAYFNRAELYKELEEYNKSIEDYSKILELDPKDKDCYNNRAIVYYLIKDYD 124
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
KA++DL + ID + R + I +Y+ A I
Sbjct: 125 KALQDLDKLVSIDKHYKNIYFNRGMVFLEIEDYKRAAI 162
>gi|434381646|ref|YP_006703429.1| TPR domain-containing protein [Brachyspira pilosicoli WesB]
gi|404430295|emb|CCG56341.1| TPR domain-containing protein [Brachyspira pilosicoli WesB]
Length = 681
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 123/253 (48%), Gaps = 7/253 (2%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+++ +Y A+ +++LKE+ E G + ++ + +I + + I+ NP +A
Sbjct: 13 IDKKQYDEALRFSEELLKENDKDAEIYYYIGNIYSSSKKYDKSIEYYDKTIKLNPKHKKA 72
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADI---LHERGIVNFKFKDFNAAVEDLSA 508
+ R ++ +G+ EA++D+ KALE D+ G++ + + A++ +
Sbjct: 73 YNNRALSKNDIGKYYEALEDIKKALELNTVKEDLYIYYDNLGLIKSNIGEHDEAIKYFNR 132
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY--QDLAN 566
++L+ + + Y G + +Y +A + KAI+L+ F W +L + L
Sbjct: 133 AIELNNKYDNVYNNRGCTYFILEKYDEAVKDFTKAIKLNNKF--KWPYLNRGVTKNKLRQ 190
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
KA++ +++ ID + +AY RG+ L ++ AI D + + ID E Y +A
Sbjct: 191 YNKAIKDFSKLIEIDSNYQEAYLNRGVSKFFLEKYNDAIDDFNKAIDIDIEYEEAYYYKA 250
Query: 627 SCYHAIGEYREAV 639
Y+A+ YRE++
Sbjct: 251 LSYYALDNYRESL 263
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 118/229 (51%), Gaps = 9/229 (3%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW--- 452
KY +I +D+ +K +P + +A R ++ + A+ D +A++ N + +
Sbjct: 51 KYDKSIEYYDKTIKLNPKHKKAYNNRALSKNDIGKYYEALEDIKKALELNTVKEDLYIYY 110
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
G ++ +GE EAI+ ++A+E ++ + RG F + ++ AV+D + +KL
Sbjct: 111 DNLGLIKSNIGEHDEAIKYFNRAIELNNKYDNVYNNRGCTYFILEKYDEAVKDFTKAIKL 170
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKA 570
+ + K Y G+ + + +Y KA + K I++D N+ EA+ + +++F+ + N A
Sbjct: 171 NNKFKWPYLNRGVTKNKLRQYNKAIKDFSKLIEIDSNYQEAYLNRGVSKFFLEKYND--A 228
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS--SGLGIDPS 617
++ + + ID + +AY+ + L + L +++++ + S S L D S
Sbjct: 229 IDDFNKAIDIDIEYEEAYYYKALSYYALDNYRESLYNFSVLSKLNYDFS 277
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 76/149 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ + N G++ AI F++ ++ + Y RG + + A+ DFT+AI+ N
Sbjct: 114 GLIKSNIGEHDEAIKYFNRAIELNNKYDNVYNNRGCTYFILEKYDEAVKDFTKAIKLNNK 173
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ RG + L + +AI+D SK +E + N + RG+ F + +N A++D +
Sbjct: 174 FKWPYLNRGVTKNKLRQYNKAIKDFSKLIEIDSNYQEAYLNRGVSKFFLEKYNDAIDDFN 233
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKA 536
+ +D E + AY Y L+ ++ Y+++
Sbjct: 234 KAIDIDIEYEEAYYYKALSYYALDNYRES 262
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ + +Y AI F ++++ D Y EA + RG ++ F + AI DF +AI
Sbjct: 179 LNRGVTKNKLRQYNKAIKDFSKLIEIDSNYQEAYLNRGVSKFFLEKYNDAIDDFNKAIDI 238
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ EA+ + + AL E++ + S
Sbjct: 239 DIEYEEAYYYKALSYYALDNYRESLYNFS 267
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 62/128 (48%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG KY A+ F + +K + + + RG + R+ AI DF++ I+ +
Sbjct: 146 NRGCTYFILEKYDEAVKDFTKAIKLNNKFKWPYLNRGVTKNKLRQYNKAIKDFSKLIEID 205
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ EA+ RG ++ L + +AI D +KA++ + + + + + + ++ ++ +
Sbjct: 206 SNYQEAYLNRGVSKFFLEKYNDAIDDFNKAIDIDIEYEEAYYYKALSYYALDNYRESLYN 265
Query: 506 LSACVKLD 513
S KL+
Sbjct: 266 FSVLSKLN 273
>gi|67920262|ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
WH 8501]
gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
WH 8501]
Length = 353
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A +GK A + + + ++ DP Y A G A Q +LE AI+ + +AI+ +P+
Sbjct: 67 GLALRKQGKLEEATAAYKKAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPN 126
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A G+ EAI KA+E +PN A + G + A+
Sbjct: 127 DAFAYNNMGLALDDQGKLEEAIAAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYK 186
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD AY +G+AL G+Y +A A+ KAI+++ N+ A+ ++ +
Sbjct: 187 KAIELDPNYSFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKY 246
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
++A+ ++ + I+ + Y+ GL L G++ +AI L IDP+
Sbjct: 247 DEAIAAYKKAIEINPNDAFGYNNMGLALDDQGKYDEAIAAHKKALEIDPN 296
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 118/239 (49%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
S++ +G NEG+Y A SI+ QI+ D A G A Q +LE A + +
Sbjct: 25 SIEQLFQQGNQAQNEGRYREAESIWRQIISIDSNNAIAYFYIGLALRKQGKLEEATAAYK 84
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI+ +P+ A+ G A G+ EAI KA+E +PN A + G+
Sbjct: 85 KAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIELDPNDAFAYNNMGLALDDQGKL 144
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ ++LD +AY +G AL+ G+ ++A A+ KAI+LD N+ A+ ++
Sbjct: 145 EEAIAAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPNYSFAYNNMGV 204
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ ++A+ ++ + I+ ++ AY+ G+ L G++ +AI + I+P++
Sbjct: 205 ALRKQGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINPND 263
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A ++GK AI+ + + ++ DP Y A G A Q +LE AI+ + +AI+ +P+
Sbjct: 135 GLALDDQGKLEEAIAAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPN 194
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ G A G+ EAI KA+E PN A + G+ K ++ A+
Sbjct: 195 YSFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYK 254
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
++++ + Y +GLAL G+Y +A AH KA+++D N + A +L +
Sbjct: 255 KAIEINPNDAFGYNNMGLALDDQGKYDEAIAAHKKALEIDPNLVLAQNNLKE 306
>gi|347756696|ref|YP_004864259.1| ankyrin repeat-containing protein [Candidatus Chloracidobacterium
thermophilum B]
gi|347589213|gb|AEP13742.1| Ankyrin repeat protein [Candidatus Chloracidobacterium thermophilum
B]
Length = 609
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
++ GKY AI ++ Q ++ +PEA RG A E A DF AIQ P+ +A
Sbjct: 45 LSAGKYEEAIQLYTQAIERKADFPEAYNWRGFAYRATGRREEARRDFDRAIQLRPNYAKA 104
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
++ R LG+ +A++D ++ + +P S + RG+ F + ++ A+ D A +K
Sbjct: 105 YELRALTLYELGQYADAVKDYTEVFKLDPKSQSNIGYRGLCYFGLEQYDEAIRDFDAAIK 164
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+ Y G A Y+ +S++AL
Sbjct: 165 ASPREALWFVYRGRA----------------------------------YEAKRDSKRAL 190
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
+Q L +D +A RG+ L+ GQ ++AI D L +P+N + L R +
Sbjct: 191 SDYEQALLLDPNNVRARTARGVALYVQGQFERAIADFDVVLRTEPNNQDMLAYRGQAHIE 250
Query: 632 IGEYREAV 639
+ + +AV
Sbjct: 251 LKRFDQAV 258
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ +Y AI FD +K P + RG A +R+ + A+SD+ +A+ +P
Sbjct: 142 RGLCYFGLEQYDEAIRDFDAAIKASPREALWFVYRGRAYEAKRDSKRALSDYEQALLLDP 201
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ A RG A G+ AI D L EPN+ D+L RG + + K F+ AV+D
Sbjct: 202 NNVRARTARGVALYVQGQFERAIADFDVVLRTEPNNQDMLAYRGQAHIELKRFDQAVKDF 261
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
V+LD N Y G A + +Y A+ +A++LD N + + + ++++
Sbjct: 262 DELVRLDPNNARGYVGRGFARYQVKDYALAKADFDRALELDPNTGKVFCYRAMTHREMGQ 321
Query: 567 SEKALECLQQVLYID 581
E A +Q +D
Sbjct: 322 LEAADADFRQCFTLD 336
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSI---SVDFRLSRGIAQVNEGKYASAISIFDQIL 408
W + + + EAKR+ K ++ ++ + +V R +RG+A +G++ AI+ FD +L
Sbjct: 172 WFVYRGRAYEAKRDSKRALSDYEQALLLDPNNVRARTARGVALYVQGQFERAIADFDVVL 231
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ +P + L RG A + + A+ DF E ++ +P+ + RG AR + + A
Sbjct: 232 RTEPNNQDMLAYRGQAHIELKRFDQAVKDFDELVRLDPNNARGYVGRGFARYQVKDYALA 291
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
D +ALE +PN+ + R + + + AA D C LD K+ Y
Sbjct: 292 KADFDRALELDPNTGKVFCYRAMTHREMGQLEAADADFRQCFTLDVGQKTVY 343
>gi|428779089|ref|YP_007170875.1| hypothetical protein Dacsa_0762 [Dactylococcopsis salina PCC 8305]
gi|428693368|gb|AFZ49518.1| tetratricopeptide repeat protein [Dactylococcopsis salina PCC 8305]
Length = 201
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 79/144 (54%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
+S K V +++G V G Y SAI FDQ+L D + +AL RG AR+ +
Sbjct: 40 LSPEKEKEVKTLMTQGNQNVASGNYESAIEAFDQVLAIDKNHVQALTQRGVARSRSEDYS 99
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A++D+ A+ + A E + RG +A L + AI+D +KA+E +P+ A + RG
Sbjct: 100 GALADYNRALAVDSEAYEVYYNRGIVQARLEDHESAIEDFTKAIERKPDFAPAIGNRGFA 159
Query: 493 NFKFKDFNAAVEDLSACVKLDKEN 516
+ + +++ AA+EDL +L KE+
Sbjct: 160 HAELENYIAAIEDLETAAELFKES 183
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A G AI+ + L + N L +RG+ + +D++ A+ D + + +D
Sbjct: 54 QGNQNVASGNYESAIEAFDQVLAIDKNHVQALTQRGVARSRSEDYSGALADYNRALAVDS 113
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
E Y G+ + + +++ A E KAI+ +F A G+ + +L N A+E L
Sbjct: 114 EAYEVYYNRGIVQARLEDHESAIEDFTKAIERKPDFAPAIGNRGFAHAELENYIAAIEDL 173
Query: 575 Q 575
+
Sbjct: 174 E 174
>gi|365119111|ref|ZP_09337405.1| hypothetical protein HMPREF1033_00751 [Tannerella sp.
6_1_58FAA_CT1]
gi|363648829|gb|EHL87975.1| hypothetical protein HMPREF1033_00751 [Tannerella sp.
6_1_58FAA_CT1]
Length = 712
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 35/254 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ N G Y AI +++ LK P L + A ++ + A F + I+++P
Sbjct: 110 RGIARQNLGDYQGAIDDYNEGLKYAPEDRTFLGNKAIAEVQLKKYDDAEKSFDKLIKTHP 169
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF-KDFNAAVED 505
S + R Q ++++AI+D+ KA+ + + + +R I+ F++ KD+ A+ D
Sbjct: 170 SYYNGYLSRSQFWLEKKDTLKAIEDIDKAISLDKHLSYAYAQRAIIKFQYTKDYQDALAD 229
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++LD N S+Y Y+ AL HL +A
Sbjct: 230 MNEALRLD-PNMSSY-YINRALIKY-------------------------HLDDLRGTMA 262
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
+ ++ +E ID A++ RGLL +G+ KAI+D S L +P N Y R
Sbjct: 263 DYDRVVE-------IDPNNLMAHYNRGLLRAQVGEKNKAIEDFSFVLKYEPDNYFAYYNR 315
Query: 626 ASCYHAIGEYREAV 639
A Y +G YR AV
Sbjct: 316 AVLYDELGNYRAAV 329
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 8/232 (3%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F ++ IA+V KY A FD+++K P Y + R +++ AI D +AI
Sbjct: 140 FLGNKAIAEVQLKKYDDAEKSFDKLIKTHPSYYNGYLSRSQFWLEKKDTLKAIEDIDKAI 199
Query: 443 QSNPSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ A+ +R + + + A+ D+++AL +PN + R ++ + D
Sbjct: 200 SLDKHLSYAYAQRAIIKFQYTKDYQDALADMNEALRLDPNMSSYYINRALIKYHLDDLRG 259
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
+ D V++D N A+ GL + +GE KA E ++ + + A+ + Y
Sbjct: 260 TMADYDRVVEIDPNNLMAHYNRGLLRAQVGEKNKAIEDFSFVLKYEPDNYFAYYNRAVLY 319
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLR-------GLLLHGLGQHKKAIK 606
+L N A++ +VL F Y+ R G + G ++KA+K
Sbjct: 320 DELGNYRAAVKDYNKVLDQYPDFYSGYYARSEAKRKSGDISGGKSDYQKAMK 371
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
+I F + I+ P E + R A+ +L + A +D + LE P RGI
Sbjct: 55 SIQYFNQVIKVKPYMAEPYFYRAAAKLSLEDFRGAEEDCNLCLERNPFITGAYQVRGIAR 114
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLG---LALSSIGEYKKAEEAHLKAIQLDRNF 550
D+ A++D + +K E++ T+LG +A + +Y AE++ K I+ ++
Sbjct: 115 QNLGDYQGAIDDYNEGLKYAPEDR---TFLGNKAIAEVQLKKYDDAEKSFDKLIKTHPSY 171
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL-LHGLGQHKKAIKDLS 609
+ +QF+ + ++ KA+E + + + +DK S AY R ++ ++ A+ D++
Sbjct: 172 YNGYLSRSQFWLEKKDTLKAIEDIDKAISLDKHLSYAYAQRAIIKFQYTKDYQDALADMN 231
Query: 610 SGLGIDPSNIECLYLRASC--YH 630
L +DP N+ Y+ + YH
Sbjct: 232 EALRLDP-NMSSYYINRALIKYH 253
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y + +D++++ P + A R R QR+ AA++D+ EAI+ P +A+ RG
Sbjct: 617 YEMVLRDYDKVIEMSPQFVYAYYNRANVRCAQRDFRAALADYNEAIRLRPDFSDAYFNRG 676
Query: 457 QARAALGESVEAIQDLSKALE 477
LGE+ + I DLSKA E
Sbjct: 677 LVYVFLGETQKGIADLSKAGE 697
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Query: 377 KSISVDFRLS-----RGIAQVNEGK-YASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
K+IS+D LS R I + K Y A++ ++ L+ DP I R + +
Sbjct: 197 KAISLDKHLSYAYAQRAIIKFQYTKDYQDALADMNEALRLDPNMSSYYINRALIKYHLDD 256
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L ++D+ ++ +P+ A RG RA +GE +AI+D S L++EP++ + R
Sbjct: 257 LRGTMADYDRVVEIDPNNLMAHYNRGLLRAQVGEKNKAIEDFSFVLKYEPDNYFAYYNRA 316
Query: 491 IVNFKFKDFNAAVEDLSACV 510
++ + ++ AAV+D + +
Sbjct: 317 VLYDELGNYRAAVKDYNKVL 336
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 20/199 (10%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
+++D+++ I+ NP+ + R + + ++ DL++ ++ N R +V
Sbjct: 505 VSVNDYSKLIEINPNNAVPYFGRALDFMLIQDFASSLDDLNRVIQLSDNFVLAYFMRAVV 564
Query: 493 NFKFKDFNAAVEDL--------SACVKLDKENKSAYTYLGLALSS------IG-EYKKAE 537
FK ++ A+ +D + L K + S+ + L SS +G +Y+
Sbjct: 565 RFKQIEYRASTQDFDTQNSKSVTEAFSLPKNSASS---ILLPNSSSNKKESVGMDYEMVL 621
Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
+ K I++ F+ A+ + + AL + + + FS AY RGL+
Sbjct: 622 RDYDKVIEMSPQFVYAYYNRANVRCAQRDFRAALADYNEAIRLRPDFSDAYFNRGLVYVF 681
Query: 598 LGQHKKAIKDLSSG--LGI 614
LG+ +K I DLS LGI
Sbjct: 682 LGETQKGIADLSKAGELGI 700
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 108/564 (19%), Positives = 213/564 (37%), Gaps = 106/564 (18%)
Query: 16 THKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLL-----AQSYEIQ 70
T K I +ID+ + +D ++ A R + K +++ A+ ++ L SY I
Sbjct: 188 TLKAIEDIDKAISLDKHLSYAYAQR-AIIKFQYTKDYQDALADMNEALRLDPNMSSYYI- 245
Query: 71 DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
NRA L+ + + D D+ +++DP L A+ +G + +G K +A+
Sbjct: 246 ---NRALIKYHLDDLRGTMADYDRVVEIDPNNLMAHYNRGLLRAQVGEKNKAI------- 295
Query: 131 EHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSE 190
+D S +Y+ N +
Sbjct: 296 ------------------------EDFSFVLKYEPDNYFAY------------------- 312
Query: 191 NHNKSDICDSSSQSRDVSETCSKS-SHDPDLCNG---RSDEAKGGSSVPVSKSGLHINGK 246
+N++ + D R + +K PD +G RS+ + + KS K
Sbjct: 313 -YNRAVLYDELGNYRAAVKDYNKVLDQYPDFYSGYYARSEAKRKSGDISGGKSDYQKAMK 371
Query: 247 LREVSENHNGSS-------DGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGR 299
L E +N N S D S++ + +DA ++ ++S + + D+ V +
Sbjct: 372 LYEQQKNTNKSYEEVADNIDESENDTSEKDADKVRKESDKNIN----KFDRLLVADNTDM 427
Query: 300 QTNGTHDVHDKLSSDSASLNDSNTNSESYS------KSSISDNKSSDSTESRSKLSFKWD 353
++ T+++ ++ + ++ + +Y K +IS ++ L ++
Sbjct: 428 KSKYTNEIRGRVQDKNFNVEIAPAFVLTYYEKPDQVKQTISFVPEVENLNRAGILPYRVL 487
Query: 354 ML--KETSNEAKRNKKFC-VTRISKSKSI----SVDFRLSRGIAQVNEGKYASAISIFDQ 406
+ + + AK NK F V SK I +V + R + + +AS++ ++
Sbjct: 488 LTNAEMALDSAKINKHFVSVNDYSKLIEINPNNAVPY-FGRALDFMLIQDFASSLDDLNR 546
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW-------------K 453
+++ + A R R Q E A+ DF Q++ S EA+
Sbjct: 547 VIQLSDNFVLAYFMRAVVRFKQIEYRASTQDFD--TQNSKSVTEAFSLPKNSASSILLPN 604
Query: 454 RRGQARAALGESVEAI-QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
+ ++G E + +D K +E P + R V +DF AA+ D + ++L
Sbjct: 605 SSSNKKESVGMDYEMVLRDYDKVIEMSPQFVYAYYNRANVRCAQRDFRAALADYNEAIRL 664
Query: 513 DKENKSAYTYLGLALSSIGEYKKA 536
+ AY GL +GE +K
Sbjct: 665 RPDFSDAYFNRGLVYVFLGETQKG 688
>gi|428225519|ref|YP_007109616.1| hypothetical protein GEI7407_2084 [Geitlerinema sp. PCC 7407]
gi|427985420|gb|AFY66564.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
PCC 7407]
Length = 1015
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A +Y AI +DQ+L +P RG A R E A+S F ++ P
Sbjct: 759 RGDALWELQQYEGAIESWDQVLAAEPEDSRCWFQRGLALRELRRYEGALSAFNRVVELEP 818
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW RG A L + EA+ KA+E +P+ + +RG+ K + A E
Sbjct: 819 ENERAWFNRGMALGRLRQLEEAVTSFDKAVELKPDYHEAWVDRGVALGKMQRHKEAFESF 878
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
V++ + A+ GLAL + + A ++ +A+ ++ + +AW +
Sbjct: 879 DQAVQVTPGDAVAWLNRGLALEVLERFDDAIASYEQALTVNPDLYKAWNYKGYLLVKQEK 938
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
++A+ C Q L I ++ A++ + G+ K+A++ LS + ++P
Sbjct: 939 DDEAIACFDQALAIQPDYAVAHYNKAACFGLQGRLKQALESLSQAIALNP 988
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
EG++ AI+ +DQ L PE RG A ++ E AI + + + + P W
Sbjct: 732 EGRFEEAIAQYDQALAVRSDLPEVWRQRGDALWELQQYEGAIESWDQVLAAEPEDSRCWF 791
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+RG A L A+ ++ +E EP + RG+ + + AV V+L
Sbjct: 792 QRGLALRELRRYEGALSAFNRVVELEPENERAWFNRGMALGRLRQLEEAVTSFDKAVELK 851
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ A+ G+AL + +K+A E+ +A+Q+ AW + + L + A+
Sbjct: 852 PDYHEAWVDRGVALGKMQRHKEAFESFDQAVQVTPGDAVAWLNRGLALEVLERFDDAIAS 911
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+Q L ++ KA++ +G LL + +AI L I P Y +A+C+ G
Sbjct: 912 YEQALTVNPDLYKAWNYKGYLLVKQEKDDEAIACFDQALAIQPDYAVAHYNKAACFGLQG 971
Query: 634 EYREAV 639
++A+
Sbjct: 972 RLKQAL 977
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+A + A++ FD+ ++ P Y EA + RG A + + A F +A+Q
Sbjct: 825 FNRGMALGRLRQLEEAVTSFDKAVELKPDYHEAWVDRGVALGKMQRHKEAFESFDQAVQV 884
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
P AW RG A L +AI +AL P+
Sbjct: 885 TPGDAVAWLNRGLALEVLERFDDAIASYEQALTVNPD 921
>gi|404484473|ref|ZP_11019677.1| hypothetical protein HMPREF9448_00083 [Barnesiella intestinihominis
YIT 11860]
gi|404339478|gb|EJZ65909.1| hypothetical protein HMPREF9448_00083 [Barnesiella intestinihominis
YIT 11860]
Length = 693
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 117/279 (41%), Gaps = 37/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y ++ F+Q++K P E RG A+ + + A D T I+ NP A++ RG
Sbjct: 43 YILSMQYFNQVIKVKPYMAEPYFYRGVAKLSLDDFKGAEEDCTLCIERNPFIVNAYQVRG 102
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR LG+ AI D ++ L + P L+ + I + K ++ A + + L
Sbjct: 103 IARQNLGDYQGAIDDYTEGLRYAPEDRSFLNNKAIAEVQLKKYDEAEKSFDKLIALHPNY 162
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECL 574
+ Y G+ KA + KAI +D+ A+ + + D A+ + AL +
Sbjct: 163 YNGYMSRAQFYLEKGDTIKAIDDIDKAISIDKYISGAYAQRAIIKVLHD-ADYDSALADM 221
Query: 575 QQVLYIDKR-----FSKA-----------------------------YHLRGLLLHGLGQ 600
+ L +D + F++A Y+ RGLL +G+
Sbjct: 222 NEALRLDPKEVSYYFNRARIKYHQDDLQGAMADYDYILKLDPDNTMTYYNRGLLRMQVGE 281
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
KAI D + + +P+N +Y RA Y IG Y +A+
Sbjct: 282 RNKAISDFTKVIKAEPNNYFAIYNRALLYDMIGNYGKAI 320
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 86/178 (48%), Gaps = 6/178 (3%)
Query: 377 KSISVDFRLSRGIAQ------VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
K+IS+D +S AQ +++ Y SA++ ++ L+ DP R + Q +
Sbjct: 188 KAISIDKYISGAYAQRAIIKVLHDADYDSALADMNEALRLDPKEVSYYFNRARIKYHQDD 247
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L+ A++D+ ++ +P + RG R +GE +AI D +K ++ EPN+ ++ R
Sbjct: 248 LQGAMADYDYILKLDPDNTMTYYNRGLLRMQVGERNKAISDFTKVIKAEPNNYFAIYNRA 307
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
++ ++ A+ D + ++ + + + A +G+ K E+ + A+ L +
Sbjct: 308 LLYDMIGNYGKAISDFNVVLEQYPDFAAGFYARSDAKRKMGDMKGGEKDFMLAMDLQK 365
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 1/227 (0%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F ++ IA+V KY A FD+++ P Y + R + + AI D +AI
Sbjct: 131 FLNNKAIAEVQLKKYDEAEKSFDKLIALHPNYYNGYMSRAQFYLEKGDTIKAIDDIDKAI 190
Query: 443 QSNPSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
+ A+ +R + + A+ D+++AL +P R + + D
Sbjct: 191 SIDKYISGAYAQRAIIKVLHDADYDSALADMNEALRLDPKEVSYYFNRARIKYHQDDLQG 250
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ D +KLD +N Y GL +GE KA K I+ + N A + Y
Sbjct: 251 AMADYDYILKLDPDNTMTYYNRGLLRMQVGERNKAISDFTKVIKAEPNNYFAIYNRALLY 310
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ N KA+ VL F+ ++ R +G K KD
Sbjct: 311 DMIGNYGKAISDFNVVLEQYPDFAAGFYARSDAKRKMGDMKGGEKDF 357
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 380 SVDFRLSRGIAQVNEG---KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
S DF LS A NE +Y + ++++++ P + RG R Q++ AI+
Sbjct: 578 SKDFSLSGLPAVGNESLKMEYEMVLRDYEKVIESAPRFIYVYYNRGNLRCSQQDYRGAIA 637
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
D+TEAI+ P G+A+ RG G++V+ DLSKA E
Sbjct: 638 DYTEAIRLRPDFGDAYYNRGLVYLKQGDTVKGTADLSKAGEL 679
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 1/249 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGIA+ N G Y AI + + L+ P L + A ++ + A F + I +P
Sbjct: 101 RGIARQNLGDYQGAIDDYTEGLRYAPEDRSFLNNKAIAEVQLKKYDEAEKSFDKLIALHP 160
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF-KDFNAAVED 505
+ + R Q G++++AI D+ KA+ + + +R I+ D+++A+ D
Sbjct: 161 NYYNGYMSRAQFYLEKGDTIKAIDDIDKAISIDKYISGAYAQRAIIKVLHDADYDSALAD 220
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
++ ++LD + S Y + + A + ++LD + + + +
Sbjct: 221 MNEALRLDPKEVSYYFNRARIKYHQDDLQGAMADYDYILKLDPDNTMTYYNRGLLRMQVG 280
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
KA+ +V+ + A + R LL +G + KAI D + L P Y R
Sbjct: 281 ERNKAISDFTKVIKAEPNNYFAIYNRALLYDMIGNYGKAISDFNVVLEQYPDFAAGFYAR 340
Query: 626 ASCYHAIGE 634
+ +G+
Sbjct: 341 SDAKRKMGD 349
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V + +R + ++ A++ +D ILK DP RG R E AISDFT+
Sbjct: 232 VSYYFNRARIKYHQDDLQGAMADYDYILKLDPDNTMTYYNRGLLRMQVGERNKAISDFTK 291
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
I++ P+ A R +G +AI D + LE P+ A + R K D
Sbjct: 292 VIKAEPNNYFAIYNRALLYDMIGNYGKAISDFNVVLEQYPDFAAGFYARSDAKRKMGDMK 351
Query: 501 AAVEDLSACVKLDKENK 517
+D + L K+ +
Sbjct: 352 GGEKDFMLAMDLQKKTQ 368
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%)
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + E E + D+ + I+S P + RG R + + AI D ++A+ P+ D
Sbjct: 593 SLKMEYEMVLRDYEKVIESAPRFIYVYYNRGNLRCSQQDYRGAIADYTEAIRLRPDFGDA 652
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+V K D DLS +L
Sbjct: 653 YYNRGLVYLKQGDTVKGTADLSKAGEL 679
>gi|443479224|ref|ZP_21068848.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
gi|443015299|gb|ELS30319.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
Length = 433
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 23/249 (9%)
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
+ E +G A+A + AI F+ AI NP EA+ +RG LG+ AI D S
Sbjct: 7 FHEDFFQQGLAKAKSGDRYGAIQAFSLAIDVNPQWAEAYYQRGLILFDLGDRQGAIADYS 66
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL------ 527
+A+ P+ D+ R + D A D++ ++++ ++ A+ LGL
Sbjct: 67 QAIMLAPDVIDVYVARSMTRIAIADILGAQTDIAQALEINPKSAIAHQLLGLTYKQQQQW 126
Query: 528 -SSIGEYKKAEEAHLKAIQLD--RNFLEAWGHL-TQFYQDLAN-------------SEKA 570
+I YK+A L+ D R +E++ L T +AN +A
Sbjct: 127 EKAIATYKQAAHLFLELRDEDNCRRCIESYKSLETMLPPSVANILADIQPKIDQGEHTQA 186
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
L L VL I+ + KA LRGL+L LG + AI+DL+ ++P NIE R
Sbjct: 187 LIALNWVLQIEPQNIKALCLRGLVLGKLGDTQLAIQDLNQATFLEPQNIEVRLGRGRIRL 246
Query: 631 AIGEYREAV 639
IG+ R A+
Sbjct: 247 EIGDARGAI 255
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
++++G++ A+ + +L+ +P +AL RG + + AI D +A P E
Sbjct: 177 KIDQGEHTQALIALNWVLQIEPQNIKALCLRGLVLGKLGDTQLAIQDLNQATFLEPQNIE 236
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
RG+ R +G++ AI D ++ + P+ D+ +R K KD+ AA+ED S +
Sbjct: 237 VRLGRGRIRLEIGDARGAIADFNELIREYPSIVDVYSDRAKAYTKLKDYRAAIEDFSRSL 296
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA--IQLDRNFLE 552
L+ N Y A G+ K A E + +A I R+ +E
Sbjct: 297 SLNHNNPQLYCDRADARYDFGDLKGAIEDYQQAANIWFTRSLME 340
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G AI +Q +P E +GRG R + AI+DF E I+ P
Sbjct: 207 RGLVLGKLGDTQLAIQDLNQATFLEPQNIEVRLGRGRIRLEIGDARGAIADFNELIREYP 266
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
S + + R +A L + AI+D S++L N+ + +R + F D A+ED
Sbjct: 267 SIVDVYSDRAKAYTKLKDYRAAIEDFSRSLSLNHNNPQLYCDRADARYDFGDLKGAIED 325
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q E A+ +Q P +A RG LG++ AIQDL++A EP + ++
Sbjct: 180 QGEHTQALIALNWVLQIEPQNIKALCLRGLVLGKLGDTQLAIQDLNQATFLEPQNIEVRL 239
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
RG + + D A+ D + ++ Y+ A + + +Y+ A E +++ L+
Sbjct: 240 GRGRIRLEIGDARGAIADFNELIREYPSIVDVYSDRAKAYTKLKDYRAAIEDFSRSLSLN 299
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQ 576
N + + D + + A+E QQ
Sbjct: 300 HNNPQLYCDRADARYDFGDLKGAIEDYQQ 328
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
+++ RL RG ++ G AI+ F+++++E P + R A ++ AAI DF+
Sbjct: 234 NIEVRLGRGRIRLEIGDARGAIADFNELIREYPSIVDVYSDRAKAYTKLKDYRAAIEDFS 293
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
++ N + + + R AR G+ AI+D +A
Sbjct: 294 RSLSLNHNNPQLYCDRADARYDFGDLKGAIEDYQQA 329
>gi|124006078|ref|ZP_01690914.1| TPR repeat [Microscilla marina ATCC 23134]
gi|123988255|gb|EAY27908.1| TPR repeat [Microscilla marina ATCC 23134]
Length = 316
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 2/196 (1%)
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD-FNAAVE 504
P+ + W G A LG+ +AI KA+ PN G VN+++ D + A+
Sbjct: 4 PNDEDIWINLGVAYEGLGKYEDAIVAYQKAIGIRPNYEKAWFNLG-VNYEWLDKYEEAII 62
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+++ ++A+ LG+ +G+Y A A+ KAI+++ NF +AW +L Y DL
Sbjct: 63 AYQKAIEIKPGYENAWINLGVVYKGLGKYNDAITAYQKAIEINPNFEQAWANLGVTYDDL 122
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E A+ Q+ + I + KA+ G++ LG++ AI +GI P +
Sbjct: 123 GKYEDAIVAYQRAIEIRPNYEKAWVNLGVVYKSLGKYDDAIAAYQKAIGIKPDFEQAWIN 182
Query: 625 RASCYHAIGEYREAVI 640
Y + Y EA++
Sbjct: 183 LGVTYDDLNNYEEAIV 198
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D ++ G+A GKY AI + + + P Y +A G + + E AI + +A
Sbjct: 8 DIWINLGVAYEGLGKYEDAIVAYQKAIGIRPNYEKAWFNLGVNYEWLDKYEEAIIAYQKA 67
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I+ P AW G LG+ +AI KA+E PN G+ +
Sbjct: 68 IEIKPGYENAWINLGVVYKGLGKYNDAITAYQKAIEINPNFEQAWANLGVTYDDLGKYED 127
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ +++ + A+ LG+ S+G+Y A A+ KAI + +F +AW +L Y
Sbjct: 128 AIVAYQRAIEIRPNYEKAWVNLGVVYKSLGKYDDAIAAYQKAIGIKPDFEQAWINLGVTY 187
Query: 562 QDLANSEKALECLQQVL 578
DL N E+A+ Q+ +
Sbjct: 188 DDLNNYEEAIVAYQKAI 204
>gi|188581172|ref|YP_001924617.1| hypothetical protein Mpop_1919 [Methylobacterium populi BJ001]
gi|179344670|gb|ACB80082.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium populi
BJ001]
Length = 286
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R +A G+ +A+ F + + DP + A IGR Q +L A++D AI+
Sbjct: 107 NRALAYRQTGRNDAAMQDFSKAIATDPNFSAAYIGRANLERAQGDLNGALNDLNVAIRLA 166
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + EA+ RG R G++ EAI D + A++ P A RG ++ A+ED
Sbjct: 167 PESAEAYHARGLVRQKQGQNPEAIGDFAAAIDRNPFVAAPYAARGQSLISLNQYDKAIED 226
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+A + ++ ++ S++ Y GLA K+A E++ +A +LD N
Sbjct: 227 FNAALNVNSKDASSWAYRGLAYEKTNRRKEANESYQQAARLDPN 270
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++RG A G++ AIS F + ++ DP A R A +AA+ DF++AI +
Sbjct: 72 VTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRALAYRQTGRNDAAMQDFSKAIAT 131
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ A+ R A G+ A+ DL+ A+ P SA+ H RG+V K A+
Sbjct: 132 DPNFSAAYIGRANLERAQGDLNGALNDLNVAIRLAPESAEAYHARGLVRQKQGQNPEAIG 191
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D +A + + + Y G +L S+ +Y KA E A+ ++ +W + Y+
Sbjct: 192 DFAAAIDRNPFVAAPYAARGQSLISLNQYDKAIEDFNAALNVNSKDASSWAYRGLAYEKT 251
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
++A E QQ +D + A G + GL
Sbjct: 252 NRRKEANESYQQAARLDPNNAVAKQGVGRMQGGL 285
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 4/220 (1%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ ++ +P A + RG A A + AISDF++AIQ +P++ A+ R A
Sbjct: 54 IASLSDVISRNPSDAGAYVTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRALAYR 113
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
G + A+QD SKA+ +PN + R + D N A+ DL+ ++L E+ AY
Sbjct: 114 QTGRNDAAMQDFSKAIATDPNFSAAYIGRANLERAQGDLNGALNDLNVAIRLAPESAEAY 173
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRN-FLEA-WGHLTQFYQDLANSEKALECLQQVL 578
GL G+ +A AI DRN F+ A + Q L +KA+E L
Sbjct: 174 HARGLVRQKQGQNPEAIGDFAAAI--DRNPFVAAPYAARGQSLISLNQYDKAIEDFNAAL 231
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++ + + ++ RGL + K+A + +DP+N
Sbjct: 232 NVNSKDASSWAYRGLAYEKTNRRKEANESYQQAARLDPNN 271
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 34/205 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I+ ++ I NPS A+ RG A A G+ EAI D SKA++ +PNSA + R +
Sbjct: 54 IASLSDVISRNPSDAGAYVTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRALAYR 113
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+ +AA++D S + D +AY IG A+L+ Q D N
Sbjct: 114 QTGRNDAAMQDFSKAIATDPNFSAAY---------IG------RANLERAQGDLN----- 153
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
AL L + + ++AYH RGL+ GQ+ +AI D ++ +
Sbjct: 154 --------------GALNDLNVAIRLAPESAEAYHARGLVRQKQGQNPEAIGDFAAAIDR 199
Query: 615 DPSNIECLYLRASCYHAIGEYREAV 639
+P R ++ +Y +A+
Sbjct: 200 NPFVAAPYAARGQSLISLNQYDKAI 224
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%)
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
N + LS + + + AY G A + G++ +A KAIQLD N A+ +
Sbjct: 51 NVNIASLSDVISRNPSDAGAYVTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRAL 110
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
Y+ ++ A++ + + D FS AY R L G A+ DL+ + + P +
Sbjct: 111 AYRQTGRNDAAMQDFSKAIATDPNFSAAYIGRANLERAQGDLNGALNDLNVAIRLAPESA 170
Query: 620 ECLYLRASCYHAIGEYREAV 639
E + R G+ EA+
Sbjct: 171 EAYHARGLVRQKQGQNPEAI 190
>gi|423348133|ref|ZP_17325818.1| hypothetical protein HMPREF1060_03490 [Parabacteroides merdae
CL03T12C32]
gi|409215095|gb|EKN08102.1| hypothetical protein HMPREF1060_03490 [Parabacteroides merdae
CL03T12C32]
Length = 707
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F + ++ I+ D L+ G + Y +I F+Q++K P E R A+
Sbjct: 10 FQLCSLAMFAQINTDRVLTIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKIN 69
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + A D T ++ NP +A+ RG AR + + EAI+D K LEF+ +L
Sbjct: 70 LDDYKGAEEDCTLCLERNPFLVQAYYARGIARQSQEKFDEAIEDYRKGLEFKAEDRQMLV 129
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ N + KDF A + + + Y G + G+ KA + KAI +D
Sbjct: 130 NMAVANIQKKDFKEAEKVFDELMAAHPKYSMNYLTRGAMYTEKGDTVKALADYDKAISMD 189
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+G+ + + N + AL L + + ++ R S Y RGL+ + L + A+ D
Sbjct: 190 PYYAPAYGNRAILHYQMNNMKDALADLNEAIRLNTRESGYYINRGLVRYQLKDLRGAMAD 249
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +D N+ + R IG+ A+
Sbjct: 250 YDQVVSMDSHNLIARFNRGLLRAQIGDNNRAI 281
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 111/243 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ K+ AI + + L+ + L+ A +++ + A F E + ++
Sbjct: 96 ARGIARQSQEKFDEAIEDYRKGLEFKAEDRQMLVNMAVANIQKKDFKEAEKVFDELMAAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++V+A+ D KA+ +P A R I++++ + A+ D
Sbjct: 156 PKYSMNYLTRGAMYTEKGDTVKALADYDKAISMDPYYAPAYGNRAILHYQMNNMKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ ++L+ Y GL + + + A + + + +D + L A + +
Sbjct: 216 LNEAIRLNTRESGYYINRGLVRYQLKDLRGAMADYDQVVSMDSHNLIARFNRGLLRAQIG 275
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++ +A+E V+ I+ AY+ R LL + G ++ ++ D L P+ + Y R
Sbjct: 276 DNNRAIEDFDVVIEIEPDNYMAYYNRALLRYETGDYQGSVHDFDVVLRQYPNFVAGYYSR 335
Query: 626 ASC 628
A
Sbjct: 336 AEV 338
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A RG R QR+ AAI D++EAIQ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRGNLRCAQRDFRAAIQDYSEAIQRDPEFAEAYFNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALEF 478
++ I DLSKA E
Sbjct: 678 DANRGIADLSKAGEL 692
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 24/203 (11%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A+I +F+ I NP+ +A+ R + + EAI+D +K +E +P+ A R +V
Sbjct: 495 ASIDNFSARIVKNPNDVDAYFGRALDFMLVQDFTEAIKDYTKVIELDPDFAMAYFNRAVV 554
Query: 493 NFKFKDFN-----AAVEDLSAC---VKLDKENKSAYTYLG--LALSSIGEYKKAEEAHL- 541
+K D+N ++ +D SA +K+ K T + A +S+ + K+A E +
Sbjct: 555 RYKQLDYNMSQAASSQDDFSAMSMNLKMGKNPTVVRTPVTSDPASASLKDNKRAYEHEMI 614
Query: 542 -----KAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
I+L+ F+ A+ G+L +D A++ + + D F++AY RGL
Sbjct: 615 TRDYDMVIKLNPGFVYAYFNRGNLRCAQRDF---RAAIQDYSEAIQRDPEFAEAYFNRGL 671
Query: 594 LLHGLGQHKKAIKDLSSG--LGI 614
G + I DLS LGI
Sbjct: 672 ARLSQGDANRGIADLSKAGELGI 694
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA++ E+ D+ I+ NP A+ RG R A + AIQD S+A++ +P A+
Sbjct: 607 RAYEHEM--ITRDYDMVIKLNPGFVYAYFNRGNLRCAQRDFRAAIQDYSEAIQRDPEFAE 664
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG+ D N + DLS +L
Sbjct: 665 AYFNRGLARLSQGDANRGIADLSKAGEL 692
>gi|265985184|ref|ZP_06097919.1| TPR repeat-containing protein [Brucella sp. 83/13]
gi|264663776|gb|EEZ34037.1| TPR repeat-containing protein [Brucella sp. 83/13]
Length = 295
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A G+Y A+ FDQ + +P + +A R + + A+ D++ AIQ NP
Sbjct: 86 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 145
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVED 505
A+ RG G +A+ + ++A+ H RG++ ++ K + A+ED
Sbjct: 146 QYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAYHNRGLI-YQAKGLHKQAIED 204
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
S + L+ Y G++ ++G++ A + AI LD+N E+W + Y+
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITLDQNVAESWANQALVYEHNG 264
Query: 566 NSEKALECLQQVLYIDKRFSKA 587
+ KA + + +D ++ A
Sbjct: 265 DKAKAANSYARAVQLDPKYKPA 286
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 83/204 (40%), Gaps = 34/204 (16%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
IS T IQSNP E + RG A G EA++D +A+ PN R +V+
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D N AV+D S ++L+ + +AY G N
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------NVYRQA 161
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
G L Q AL Q + + +AYH RGL+ G HK+AI+D S + +
Sbjct: 162 GRLDQ----------ALNNFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 211
Query: 615 DPSNIECLYLRASCYHAIGEYREA 638
+ + E R Y A+G++ A
Sbjct: 212 NSTAPEPYNGRGISYVALGDFDNA 235
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
IS +++ +P PE RG+A + A+ DF +AI NP+ +A+ R
Sbjct: 66 ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+G++ +A+QD S+A++ P RG V + + A+ + + + L + AY
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAY 185
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
GL + G +K+A E KAI L+ E + Y L + + A + + +
Sbjct: 186 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITL 245
Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
D+ ++++ + L+ G KA + + +DP
Sbjct: 246 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 281
>gi|220909868|ref|YP_002485179.1| hypothetical protein Cyan7425_4508 [Cyanothece sp. PCC 7425]
gi|219866479|gb|ACL46818.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 836
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 7/188 (3%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
V +G A++ +++LK + G GTA + AI+ + +A++ P+ A
Sbjct: 570 VGQGNIRDALNCLNKLLKFETNSSLLWFGHGTALGKSGAYKEAIASYDQALKLKPNDDVA 629
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
W RG A LG EA+ ++AL+F+P +D L RGIV K + A+ +K
Sbjct: 630 WNERGNALEHLGRYEEALISYNQALKFKPEDSDTLSNRGIVQAKLGQYEDAIASFDQSLK 689
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDL 564
+ ++ + G+ L ++G YK+A ++ KAI+++ + +AW G L F Q +
Sbjct: 690 IKPDDPENWYSRGIVLGNLGRYKEAIASYDKAIEINPEYSDAWINRSASLGDLKLFNQAI 749
Query: 565 ANSEKALE 572
A+ ++AL+
Sbjct: 750 ASCDQALK 757
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 112/276 (40%), Gaps = 35/276 (12%)
Query: 395 GKYASAISIFDQI-LKED---PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
GK+ + IFD I L +D P+YP +I +Q + + DF +AI + P
Sbjct: 444 GKFPATPWIFDAIRLLQDFGVPLYPFTVIPTARMLLWQTLRQKSRRDFWKAISTYP---R 500
Query: 451 AWKRRGQARAALGESVEAI------QDLSKALEFEPNSADILH----------------E 488
W QA A L E+ + I Q +K EP + + + +
Sbjct: 501 YWLNIPQALAYL-EANQGILEPRDGQIAAKPDPLEPAAYHVQYLIDLLLRLVDQHPQKLQ 559
Query: 489 RGIVNFKFK-----DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
++N F + A+ L+ +K + + + G AL G YK+A ++ +A
Sbjct: 560 ASLLNIAFMLVGQGNIRDALNCLNKLLKFETNSSLLWFGHGTALGKSGAYKEAIASYDQA 619
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
++L N AW + L E+AL Q L S RG++ LGQ++
Sbjct: 620 LKLKPNDDVAWNERGNALEHLGRYEEALISYNQALKFKPEDSDTLSNRGIVQAKLGQYED 679
Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
AI L I P + E Y R +G Y+EA+
Sbjct: 680 AIASFDQSLKIKPDDPENWYSRGIVLGNLGRYKEAI 715
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI Q G+Y AI+ FDQ LK P PE RG + AI+ + +AI+ N
Sbjct: 666 NRGIVQAKLGQYEDAIASFDQSLKIKPDDPENWYSRGIVLGNLGRYKEAIASYDKAIEIN 725
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
P +AW R + L +AI +AL+++P+S
Sbjct: 726 PEYSDAWINRSASLGDLKLFNQAIASCDQALKYKPDS 762
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG A + G+Y A+ ++Q LK P + L RG +A + E AI+ F ++++ P
Sbjct: 633 RGNALEHLGRYEEALISYNQALKFKPEDSDTLSNRGIVQAKLGQYEDAIASFDQSLKIKP 692
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
E W RG LG EAI KA+E P +D R K FN A+
Sbjct: 693 DDPENWYSRGIVLGNLGRYKEAIASYDKAIEINPEYSDAWINRSASLGDLKLFNQAI 749
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G +A+ L+K L+FE NS+ + G K + A+ +KL + A+
Sbjct: 573 GNIRDALNCLNKLLKFETNSSLLWFGHGTALGKSGAYKEAIASYDQALKLKPNDDVAWNE 632
Query: 523 LGLALSSIGEYKKAEEAHLKAIQL---------DRNFLEAWGHLTQFYQDLANSEKALEC 573
G AL +G Y++A ++ +A++ +R ++A L E A+
Sbjct: 633 RGNALEHLGRYEEALISYNQALKFKPEDSDTLSNRGIVQA---------KLGQYEDAIAS 683
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
Q L I + ++ RG++L LG++K+AI + I+P
Sbjct: 684 FDQSLKIKPDDPENWYSRGIVLGNLGRYKEAIASYDKAIEINP 726
>gi|333381476|ref|ZP_08473158.1| hypothetical protein HMPREF9455_01324 [Dysgonomonas gadei ATCC
BAA-286]
gi|332830446|gb|EGK03074.1| hypothetical protein HMPREF9455_01324 [Dysgonomonas gadei ATCC
BAA-286]
Length = 684
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 107/243 (44%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI F+Q +K P E R A+ + + D T A++ NP +A++ R
Sbjct: 39 YVLAIQYFNQAIKAKPYLAEPYFYRAIAKYYLDDYRGTEDDCTLALERNPFMSKAYQLRA 98
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR A++D +LE PN L GIVN + KD+ A + L+ +K
Sbjct: 99 DARQNQNNYDGALEDYKVSLEVYPNDKFALINMGIVNIQKKDYEEAEKYLNTLLKSYPTY 158
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
+ G G+ +A E + +AI+LD+ +++ Y + +KA+ L +
Sbjct: 159 TQGFLTRGALYQEKGDTLQAFENYNQAIKLDKYLPQSYSMRGLLYYYKKDYDKAMADLDE 218
Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
+ ID S Y RGL+ + + A+ D + +DP+NI + R +G+
Sbjct: 219 AIRIDPLQSGNYINRGLIRYSKNDLRGAMSDYDKVIDLDPNNIIARFNRGLLRSQVGDDN 278
Query: 637 EAV 639
A+
Sbjct: 279 RAI 281
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
LIGR + + + AI F +AI++ P E + R A+ L + D + ALE
Sbjct: 28 LIGRNSL--YFEDYVLAIQYFNQAIKAKPYLAEPYFYRAIAKYYLDDYRGTEDDCTLALE 85
Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
P + R +++ A+ED +++ +K A +G+ +Y++AE
Sbjct: 86 RNPFMSKAYQLRADARQNQNNYDGALEDYKVSLEVYPNDKFALINMGIVNIQKKDYEEAE 145
Query: 538 EAHLKAIQLDRNFLEAWGHLTQ-------FYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
+ +L + L+++ TQ YQ+ ++ +A E Q + +DK ++Y +
Sbjct: 146 K-YLNTL------LKSYPTYTQGFLTRGALYQEKGDTLQAFENYNQAIKLDKYLPQSYSM 198
Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDP 616
RGLL + + KA+ DL + IDP
Sbjct: 199 RGLLYYYKKDYDKAMADLDEAIRIDP 224
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 115/260 (44%), Gaps = 1/260 (0%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C + ++ +S ++L R A+ N+ Y A+ + L+ P ALI G +
Sbjct: 80 CTLALERNPFMSKAYQL-RADARQNQNNYDGALEDYKVSLEVYPNDKFALINMGIVNIQK 138
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ E A ++S P+ + + RG G++++A ++ ++A++ +
Sbjct: 139 KDYEEAEKYLNTLLKSYPTYTQGFLTRGALYQEKGDTLQAFENYNQAIKLDKYLPQSYSM 198
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
RG++ + KD++ A+ DL +++D Y GL S + + A + K I LD
Sbjct: 199 RGLLYYYKKDYDKAMADLDEAIRIDPLQSGNYINRGLIRYSKNDLRGAMSDYDKVIDLDP 258
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N + A + + + +A+ VL + AY R L+ + +G + +++DL
Sbjct: 259 NNIIARFNRGLLRSQVGDDNRAIADFDIVLKYEPNNYIAYFNRSLIKNNIGDYTGSLEDL 318
Query: 609 SSGLGIDPSNIECLYLRASC 628
+ L P Y+R+
Sbjct: 319 NVVLAEYPEFYHGFYMRSEI 338
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
+ E ++I DLSK + +P +AD+ R + +DF ++ED + + LD + AY
Sbjct: 476 IQEHFKSIDDLSKRIADQPANADLYFARAMDYMLVQDFTNSIEDFNKAISLDPKFTLAYF 535
Query: 522 YLGLALS-------SIGEYKKAEE----AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
L + + ++ EY+K + A L I+ D N L A + D E
Sbjct: 536 NLAVVYTKQLNLRENVPEYEKKSDQTDLATLGGIKKD-NSLPAATTIV----DPGKMEYD 590
Query: 571 L--ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
L + +V+ ++ F AY+ R + + ++ AI D + L DP E Y R
Sbjct: 591 LIVKNYNKVIELNPEFIYAYYNRAGIRYKQNDYRAAILDYNEALRRDPEFAEGYYNRG 648
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 392 VNEGK--YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
V+ GK Y + ++++++ +P + A R R Q + AAI D+ EA++ +P
Sbjct: 582 VDPGKMEYDLIVKNYNKVIELNPEFIYAYYNRAGIRYKQNDYRAAILDYNEALRRDPEFA 641
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALE 477
E + RG +R + + A+ D+ KA E
Sbjct: 642 EGYYNRGLSRFQVKDKDRALDDMRKAGE 669
>gi|145504450|ref|XP_001438197.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405358|emb|CAK70800.1| unnamed protein product [Paramecium tetraurelia]
Length = 728
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 114/231 (49%), Gaps = 2/231 (0%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G+ A+ ++ + + D A + R R+LE A+ D+ +AI+ N + A+
Sbjct: 108 KGRLDEALDLYSKAIGLDKNCSNAFLHRALLFKEIRQLEKALKDYNQAIEINQNNPNAYF 167
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG +GE +A+QD +A+E P +A I RG + A++D ++++
Sbjct: 168 NRGVLLKEIGEYEQALQDYDRAIELNPTNASIYLNRGALLSSMNQKERALKDYDKAIQIN 227
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
E +AY L L + + KA + I++++ A+ + + L ++AL+
Sbjct: 228 PEYSNAYLNRALLLCDMDQIGKAVKDCNSIIKINKQDANAYFNRGFLFDQLDQRQQALDD 287
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
Q + I+ + S+A+ RGLL + + +KA+KD + L I PSN LYL
Sbjct: 288 YTQTIEINPKDSRAFINRGLLYWRMQEKEKAMKDCFTALEICPSN--PLYL 336
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 121/247 (48%), Gaps = 7/247 (2%)
Query: 400 AISIFDQILKEDPMYPEALIGRG-----TARAFQRE--LEAAISDFTEAIQSNPSAGEAW 452
A+ +Q + +P + RG A +Q+ L+ A+ D +AI+ NP A+
Sbjct: 39 ALDDLNQAIFHNPSLVSSFYHRGISKTDVATVYQKNQMLDKALEDCDQAIKLNPDYALAY 98
Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
++G G EA+ SKA+ + N ++ R ++ + + A++D + +++
Sbjct: 99 SKKGSLMKIKGRLDEALDLYSKAIGLDKNCSNAFLHRALLFKEIRQLEKALKDYNQAIEI 158
Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
++ N +AY G+ L IGEY++A + + +AI+L+ + + + E+AL+
Sbjct: 159 NQNNPNAYFNRGVLLKEIGEYEQALQDYDRAIELNPTNASIYLNRGALLSSMNQKERALK 218
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
+ + I+ +S AY R LLL + Q KA+KD +S + I+ + + R + +
Sbjct: 219 DYDKAIQINPEYSNAYLNRALLLCDMDQIGKAVKDCNSIIKINKQDANAYFNRGFLFDQL 278
Query: 633 GEYREAV 639
+ ++A+
Sbjct: 279 DQRQQAL 285
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 118/235 (50%)
Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
DQ +K +P Y A +G+ + L+ A+ +++AI + + A+ R + +
Sbjct: 85 DQAIKLNPDYALAYSKKGSLMKIKGRLDEALDLYSKAIGLDKNCSNAFLHRALLFKEIRQ 144
Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
+A++D ++A+E N+ + RG++ + ++ A++D ++L+ N S Y G
Sbjct: 145 LEKALKDYNQAIEINQNNPNAYFNRGVLLKEIGEYEQALQDYDRAIELNPTNASIYLNRG 204
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
LSS+ + ++A + + KAIQ++ + A+ + D+ KA++ ++ I+K+
Sbjct: 205 ALLSSMNQKERALKDYDKAIQINPEYSNAYLNRALLLCDMDQIGKAVKDCNSIIKINKQD 264
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ AY RG L L Q ++A+ D + + I+P + R Y + E +A+
Sbjct: 265 ANAYFNRGFLFDQLDQRQQALDDYTQTIEINPKDSRAFINRGLLYWRMQEKEKAM 319
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 104/196 (53%), Gaps = 8/196 (4%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQ-ARAALGESVEAIQDLSKALEFEPNSADILHER 489
++ A + +A++ +P EA++ RG+ E ++A+ DL++A+ P+ + R
Sbjct: 1 MDHAQEEINKALKLDPKYAEAYQLRGRLIHFKKEEKLKALDDLNQAIFHNPSLVSSFYHR 60
Query: 490 GI-------VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
GI V K + + A+ED +KL+ + AY+ G + G +A + + K
Sbjct: 61 GISKTDVATVYQKNQMLDKALEDCDQAIKLNPDYALAYSKKGSLMKIKGRLDEALDLYSK 120
Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
AI LD+N A+ H ++++ EKAL+ Q + I++ AY RG+LL +G+++
Sbjct: 121 AIGLDKNCSNAFLHRALLFKEIRQLEKALKDYNQAIEINQNNPNAYFNRGVLLKEIGEYE 180
Query: 603 KAIKDLSSGLGIDPSN 618
+A++D + ++P+N
Sbjct: 181 QALQDYDRAIELNPTN 196
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 86/185 (46%), Gaps = 5/185 (2%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ G+Y A+ +D+ ++ +P + RG + + E A+ D+ +AIQ
Sbjct: 167 FNRGVLLKEIGEYEQALQDYDRAIELNPTNASIYLNRGALLSSMNQKERALKDYDKAIQI 226
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP A+ R + + +A++D + ++ A+ RG + + A++
Sbjct: 227 NPEYSNAYLNRALLLCDMDQIGKAVKDCNSIIKINKQDANAYFNRGFLFDQLDQRQQALD 286
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWGHLTQFY 561
D + ++++ ++ A+ GL + E +KA + A+++ + +L G L +
Sbjct: 287 DYTQTIEINPKDSRAFINRGLLYWRMQEKEKAMKDCFTALEICPSNPLYLTIIGDLH--F 344
Query: 562 QDLAN 566
QDL N
Sbjct: 345 QDLQN 349
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 16/144 (11%)
Query: 22 EIDELVRVDSVMASAITARIELA------KLCSLRNWSKAIRILDSLLAQSYEIQDI--C 73
EI++ +++D A A R L KL +L + ++AI SL++ Y + I
Sbjct: 7 EINKALKLDPKYAEAYQLRGRLIHFKKEEKLKALDDLNQAIFHNPSLVSSFYH-RGISKT 65
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY--- 130
+ A Y + ++ + DCD+A++L+P AY KG GR +EAL ++ K
Sbjct: 66 DVATVYQKNQMLDKALEDCDQAIKLNPDYALAYSKKGSLMKIKGRLDEALDLYSKAIGLD 125
Query: 131 ----EHALHQSADLKQFLELEELL 150
LH++ K+ +LE+ L
Sbjct: 126 KNCSNAFLHRALLFKEIRQLEKAL 149
>gi|434385392|ref|YP_007096003.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428016382|gb|AFY92476.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 302
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 17/256 (6%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI + + G SAI+ +D+ ++ +P Y +A RG A+ +L AI+D+ AI +
Sbjct: 45 QGINKHSSGDLVSAIAEYDRAIELNPNYAKAYNNRGLAKGQLGDLAGAIADYNRAINLDR 104
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ +A+ RG+AR G AI D S A++ P+ A + RG+ D +A+ D
Sbjct: 105 NYAKAYYNRGRARVETGNIAPAIADYSWAIKHAPHYAKAYYYRGLAKLNVDDKQSAIADF 164
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+++ AY + G +G+ A ++I++ + A H ++ +
Sbjct: 165 DRAIEVSPNYAPAYYHRGNTKHDVGDIVGAIADFDRSIEIAPGEIGAIYHRGTIKGEIGD 224
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ A+ +VL +D +++AY+ R L +K +KD P I A
Sbjct: 225 NAGAIYDYDRVLALDPNYARAYYNRAL-------NKVKLKD-------KPGAIFDFDRAA 270
Query: 627 SCYHAIGE---YREAV 639
+ +H GE YR A+
Sbjct: 271 TLFHERGEIDGYRRAI 286
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G A AI+ +++ + D Y +A RG AR + AI+D++ AI+
Sbjct: 78 NRGLAKGQLGDLAGAIADYNRAINLDRNYAKAYYNRGRARVETGNIAPAIADYSWAIKHA 137
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P +A+ RG A+ + + AI D +A+E PN A + RG D A+ D
Sbjct: 138 PHYAKAYYYRGLAKLNVDDKQSAIADFDRAIEVSPNYAPAYYHRGNTKHDVGDIVGAIAD 197
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
+++ A + G IG+ A + + + LD N+ A+
Sbjct: 198 FDRSIEIAPGEIGAIYHRGTIKGEIGDNAGAIYDYDRVLALDPNYARAY 246
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 10/188 (5%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ R+G + + G+ V AI + +A+E PN A + RG+ + D A+ D + +
Sbjct: 42 YNRQGINKHSSGDLVSAIAEYDRAIELNPNYAKAYNNRGLAKGQLGDLAGAIADYNRAIN 101
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA-----N 566
LD+ AY G A G A + AI+ ++ +A+ +Y+ LA +
Sbjct: 102 LDRNYAKAYYNRGRARVETGNIAPAIADYSWAIKHAPHYAKAY-----YYRGLAKLNVDD 156
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ A+ + + + ++ AY+ RG H +G AI D + I P I +Y R
Sbjct: 157 KQSAIADFDRAIEVSPNYAPAYYHRGNTKHDVGDIVGAIADFDRSIEIAPGEIGAIYHRG 216
Query: 627 SCYHAIGE 634
+ IG+
Sbjct: 217 TIKGEIGD 224
>gi|376003939|ref|ZP_09781739.1| conserved hypothetical protein (fragment) [Arthrospira sp. PCC
8005]
gi|375327759|emb|CCE17492.1| conserved hypothetical protein (fragment) [Arthrospira sp. PCC
8005]
Length = 265
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFE 479
RG AR + + + AI+DFT+AI+ N + A+ RG R +G ++ EAI D ++A+
Sbjct: 48 RGVARYQRGDKQGAIADFTQAIRLNRNHALAYYNRGVVRFRIGNNLTEAIADFTQAIRIN 107
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P D + R I K + + A++D++ + LD + A+ GL S
Sbjct: 108 PEYVDAYYNRAIARVKVQQYWPAIDDVTQVISLDPSHDRAFYLRGLIYS----------- 156
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
++L + + + + + ++ R Y RG + +G
Sbjct: 157 ----------------------ENLKDYQTGINDFTEAIRLNPRNPAPYFKRGNARYRIG 194
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
++AI D + + I+PS+ E Y RA + IG+ + A+
Sbjct: 195 DRERAIDDYNKAIDINPSDPEPYYNRAISRYQIGDRQGAIF 235
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 4/201 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQ 443
RG+A+ G AI+ F Q ++ + + A RG R L AI+DFT+AI+
Sbjct: 46 FERGVARYQRGDKQGAIADFTQAIRLNRNHALAYYNRGVVRFRIGNNLTEAIADFTQAIR 105
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-NFKFKDFNAA 502
NP +A+ R AR + + AI D+++ + +P+ + RG++ + KD+
Sbjct: 106 INPEYVDAYYNRAIARVKVQQYWPAIDDVTQVISLDPSHDRAFYLRGLIYSENLKDYQTG 165
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + ++L+ N + Y G A IG+ ++A + + KAI ++ + E + +
Sbjct: 166 INDFTEAIRLNPRNPAPYFKRGNARYRIGDRERAIDDYNKAIDINPSDPEPYYNRAISRY 225
Query: 563 DLANSEKALECLQQV--LYID 581
+ + + A+ LQ+ LY+D
Sbjct: 226 QIGDRQGAIFDLQKSADLYLD 246
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFT 439
VD +R IA+V +Y AI Q++ DP + A RG + ++ + I+DFT
Sbjct: 111 VDAYYNRAIARVKVQQYWPAIDDVTQVISLDPSHDRAFYLRGLIYSENLKDYQTGINDFT 170
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI+ NP + +RG AR +G+ AI D +KA++ P+ + + R I ++ D
Sbjct: 171 EAIRLNPRNPAPYFKRGNARYRIGDRERAIDDYNKAIDINPSDPEPYYNRAISRYQIGDR 230
Query: 500 NAAVEDL--SACVKLDKENKSAY 520
A+ DL SA + LD N Y
Sbjct: 231 QGAIFDLQKSADLYLDLGNFEKY 253
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F L I N Y + I+ F + ++ +P P RG AR + E AI D+ +AI
Sbjct: 148 FYLRGLIYSENLKDYQTGINDFTEAIRLNPRNPAPYFKRGNARYRIGDRERAIDDYNKAI 207
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
NPS E + R +R +G+ AI DL K SAD+ + G F+ + A
Sbjct: 208 DINPSDPEPYYNRAISRYQIGDRQGAIFDLQK-------SADLYLDLG----NFEKYQKA 256
Query: 503 VEDL 506
++ L
Sbjct: 257 IDTL 260
>gi|282897473|ref|ZP_06305475.1| TPR repeat protein [Raphidiopsis brookii D9]
gi|281198125|gb|EFA73019.1| TPR repeat protein [Raphidiopsis brookii D9]
Length = 548
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A G Y AIS ++Q++ + + A RG A R +AI DF++AI NP
Sbjct: 305 GLAYYQLGDYDMAISNYNQVINANVNHSNAYNKRGLAHYKSRNYHSAIEDFSQAISINPE 364
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+K R +AR +G+ AI+D S+ L P D+L + +V + FN D
Sbjct: 365 LAINYKNRAEARYLIGDYQGAIEDYSQVLSIHP---DLLDQPILVGDIGELFNIKCHD-- 419
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++ +N++ + Y +GEY++A E + +AI L+ N+++A+ + Y +
Sbjct: 420 ---EVIYKNRADHLY------QLGEYEEAVENYNQAIALNINYVDAYYQRGKIYFNRGIY 470
Query: 568 EKALECLQQVLYIDKRFSKAYHLRG 592
E A++ V+ + AY+ RG
Sbjct: 471 EAAVDDFSMVIKTQPNYGDAYYYRG 495
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 121/275 (44%), Gaps = 33/275 (12%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V+F + G + G Y AIS + Q L+ + +Q EL + + + +
Sbjct: 239 VEFYVKLGDKHFDHGDYIVAISNYSQALQNNK----------KNSYYQEELRSEL-NLSH 287
Query: 441 AIQSNPSAGE--AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
N S + A+ + G A LG+ AI + ++ + N ++ ++RG+ ++K ++
Sbjct: 288 KYADNISNIDIHAYYKLGLAYYQLGDYDMAISNYNQVINANVNHSNAYNKRGLAHYKSRN 347
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA---WG 555
+++A+ED S + ++ E Y A IG+Y+ A E + + + + + L+ G
Sbjct: 348 YHSAIEDFSQAISINPELAINYKNRAEARYLIGDYQGAIEDYSQVLSIHPDLLDQPILVG 407
Query: 556 HLTQFYQ-----------------DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ + + L E+A+E Q + ++ + AY+ RG +
Sbjct: 408 DIGELFNIKCHDEVIYKNRADHLYQLGEYEEAVENYNQAIALNINYVDAYYQRGKIYFNR 467
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
G ++ A+ D S + P+ + Y R +C+ +G
Sbjct: 468 GIYEAAVDDFSMVIKTQPNYGDAYYYRGNCWLIMG 502
>gi|423063588|ref|ZP_17052378.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
gi|406715020|gb|EKD10178.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
Length = 265
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFE 479
RG AR + + + AI+DFT+AI+ N + A+ RG R +G ++ EAI D ++A+
Sbjct: 48 RGVARYQRGDKQGAIADFTQAIRLNRNHALAYYNRGVVRFRIGNNLTEAIADFTQAIRIN 107
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P D + R I K + + A++D++ + LD + A+ GL S
Sbjct: 108 PEYVDAYYNRAIARVKVQQYWPAIDDVTQVISLDPSHDRAFYLRGLIYS----------- 156
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
++L + + + + + ++ R Y RG + +G
Sbjct: 157 ----------------------ENLKDYQTGINDFTEAIRLNPRNPAPYFKRGNARYRIG 194
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
++AI D + + I+PS+ E Y RA + IG+ + A+
Sbjct: 195 DRERAIDDYNKAIDINPSDPEPYYNRAISRYQIGDRQGAIF 235
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 4/201 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQ 443
RG+A+ G AI+ F Q ++ + + A RG R L AI+DFT+AI+
Sbjct: 46 FERGVARYQRGDKQGAIADFTQAIRLNRNHALAYYNRGVVRFRIGNNLTEAIADFTQAIR 105
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-NFKFKDFNAA 502
NP +A+ R AR + + AI D+++ + +P+ + RG++ + KD+
Sbjct: 106 INPEYVDAYYNRAIARVKVQQYWPAIDDVTQVISLDPSHDRAFYLRGLIYSENLKDYQTG 165
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ D + ++L+ N + Y G A IG+ ++A + + KAI ++ + E + +
Sbjct: 166 INDFTEAIRLNPRNPAPYFKRGNARYRIGDRERAIDDYNKAIDINPSDPEPYYNRAISRY 225
Query: 563 DLANSEKALECLQQV--LYID 581
+ + + A+ LQ+ LY+D
Sbjct: 226 QIGDRQGAIFDLQKSADLYLD 246
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFT 439
VD +R IA+V +Y AI Q++ DP + A RG + ++ + I+DFT
Sbjct: 111 VDAYYNRAIARVKVQQYWPAIDDVTQVISLDPSHDRAFYLRGLIYSENLKDYQTGINDFT 170
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI+ NP + +RG AR +G+ AI D +KA++ P+ + + R I ++ D
Sbjct: 171 EAIRLNPRNPAPYFKRGNARYRIGDRERAIDDYNKAIDINPSDPEPYYNRAISRYQIGDR 230
Query: 500 NAAVEDL--SACVKLDKENKSAY 520
A+ DL SA + LD N Y
Sbjct: 231 QGAIFDLQKSADLYLDLGNFEKY 253
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F L I N Y + I+ F + ++ +P P RG AR + E AI D+ +AI
Sbjct: 148 FYLRGLIYSENLKDYQTGINDFTEAIRLNPRNPAPYFKRGNARYRIGDRERAIDDYNKAI 207
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
NPS E + R +R +G+ AI DL K SAD+ + G F+ + A
Sbjct: 208 DINPSDPEPYYNRAISRYQIGDRQGAIFDLQK-------SADLYLDLG----NFEKYQKA 256
Query: 503 VEDL 506
++ L
Sbjct: 257 IDTL 260
>gi|325298804|ref|YP_004258721.1| hypothetical protein [Bacteroides salanitronis DSM 18170]
gi|324318357|gb|ADY36248.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
salanitronis DSM 18170]
Length = 668
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E RG A+ + + A +D TE+I+ NP ++ RG
Sbjct: 41 YVLSIQYFNQVINAKPYLAEPYFYRGLAKLNLDDFQGAEADCTESIERNPYVPNTYQVRG 100
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHE---------------------------- 488
AR + AIQD KAL F+P + + H
Sbjct: 101 IARIQQEDYKGAIQDYEKALTFDPENTSLWHNLALSRMRDEDYKEAKADLDTLIRIAPRY 160
Query: 489 ------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
R V+ K KD A+ D +++D+ N + G+ +Y AE +
Sbjct: 161 IDAYLMRTEVSLKQKDTLQAMSDADRAIEMDRYNADTWASRGMLFLQRSKYADAESDLTE 220
Query: 543 AIQLD-RNF-LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
AI+L RN L L ++YQ+ N A+ L IDK ++ RGLL +G
Sbjct: 221 AIRLSVRNAGLYINRALARYYQN--NLRGAMSDYDLALDIDKNNFIGHYNRGLLRAQVGD 278
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D L I+P N+ ++ R G+Y A+
Sbjct: 279 DNRAIEDFDFVLQIEPDNMMAVFNRGLLRDRTGDYAGAI 317
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ + KYA A S + ++ I R AR +Q L A+SD+ A+ +
Sbjct: 200 SRGMLFLQRSKYADAESDLTEAIRLSVRNAGLYINRALARYYQNNLRGAMSDYDLALDID 259
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RG RA +G+ AI+D L+ EP++ + RG++ + D+ A+ D
Sbjct: 260 KNNFIGHYNRGLLRAQVGDDNRAIEDFDFVLQIEPDNMMAVFNRGLLRDRTGDYAGAISD 319
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
++ ++ + Y Y A G+ K A + + +Q
Sbjct: 320 YTSVLEEYPNFLAGYQYRAEARKKTGDLKGASQDEMVVLQ 359
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
QV YA D++++ P + A RG A ++ AA+ D+ +AI+ +P +
Sbjct: 563 QVRALDYAMVRDDLDKVIQLAPDFVYAYYNRGNIYAVMKDYRAALVDYNKAIELDPRFSD 622
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEF 478
A+ RG LG + E +QDLSKA E
Sbjct: 623 AYYNRGLTNVFLGNNNEGVQDLSKAGEL 650
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 96/251 (38%), Gaps = 34/251 (13%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
++++ + Y A + D +++ P Y +A + R Q++ A+SD AI+ +
Sbjct: 134 ALSRMRDEDYKEAKADLDTLIRIAPRYIDAYLMRTEVSLKQKDTLQAMSDADRAIEMDRY 193
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ W RG + +A DL++A+ +A + R + + + A+ D
Sbjct: 194 NADTWASRGMLFLQRSKYADAESDLTEAIRLSVRNAGLYINRALARYYQNNLRGAMSDYD 253
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ +DK N IG Y +R L A + +
Sbjct: 254 LALDIDKNN------------FIGHY-------------NRGLLRA---------QVGDD 279
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+A+E VL I+ A RGLL G + AI D +S L P+ + RA
Sbjct: 280 NRAIEDFDFVLQIEPDNMMAVFNRGLLRDRTGDYAGAISDYTSVLEEYPNFLAGYQYRAE 339
Query: 628 CYHAIGEYREA 638
G+ + A
Sbjct: 340 ARKKTGDLKGA 350
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 429 RELEAAI--SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
R L+ A+ D + IQ P A+ RG A + + A+ D +KA+E +P +D
Sbjct: 565 RALDYAMVRDDLDKVIQLAPDFVYAYYNRGNIYAVMKDYRAALVDYNKAIELDPRFSDAY 624
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKL 512
+ RG+ N + N V+DLS +L
Sbjct: 625 YNRGLTNVFLGNNNEGVQDLSKAGEL 650
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 26/162 (16%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
EP +A R + + +DF+ A+ DL+ ++ D AY EY+K +
Sbjct: 491 EPENALHYFARALDFYLVQDFDNALADLNRTIERDSVFFPAYFMRAAIHYKQIEYRKRDT 550
Query: 539 AHL------------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ K IQL +F+ A+ + Y + + AL
Sbjct: 551 QYEIEQPDDKKLQVRALDYAMVRDDLDKVIQLAPDFVYAYYNRGNIYAVMKDYRAALVDY 610
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
+ + +D RFS AY+ RGL LG + + ++DLS LGI
Sbjct: 611 NKAIELDPRFSDAYYNRGLTNVFLGNNNEGVQDLSKAGELGI 652
>gi|113475191|ref|YP_721252.1| glycosyl transferase family protein [Trichodesmium erythraeum
IMS101]
gi|110166239|gb|ABG50779.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
Length = 1737
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G + ++ AIS + Q +K P P+ G A Q+ E A+ + + + P+
Sbjct: 257 GYVLTQKQQWEEAISAYRQAIKIKPNSPDVYHHLGDALTQQQNWEEAVGAYRKVTELQPN 316
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ E + G A + L + EAI KA E +PNS D+ H+ G + K + AV +L
Sbjct: 317 SPEVYHYFGYALSQLQQWEEAIVAYRKASELQPNSPDVHHQLGHALIELKQNDWAVVELR 376
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
V+L+ AY LG ALS+I ++ +A + AI+L+ N E +G+L + Y
Sbjct: 377 QAVELNPNLAEAYRDLGRALSNIKQWDEAIASFQGAIELNPNLAEVYGYLGKAYASQKQW 436
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLL 595
++A+ L ++ + + +H L L
Sbjct: 437 DEAIVNYGHALKLNPKLPEVHHNLALTL 464
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 7/240 (2%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
GK+ A +++ + ++ P + G + Q +LE AI+ +++AI+ NP+ E +
Sbjct: 60 GKWEEAATVYQKAIELKPTSALSHYNLGNVQEKQGQLEQAIASYSQAIKINPNFSELYIS 119
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G A G EAI + KA+ EP S+ G+ K + +++D
Sbjct: 120 LGSALVQKGLLYEAIANFQKAISLEPESSIAHQNLGVALEKQGQIEEGIICYRKAIEIDP 179
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
Y LG+AL+ GE+ +A + +LKA Q+ N + H + L ++A+
Sbjct: 180 GFWEGYQKLGIALTKQGEFHQAAKIYLKACQIIPNSATVYHHYGETLAKLRRWDEAIAAY 239
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+Q + ++ YH G +L Q ++AI + I P++ YH +G+
Sbjct: 240 RQAIKLEANSPVIYHQFGYVLTQKQQWEEAISAYRQAIKIKPNS-------PDVYHHLGD 292
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 111/240 (46%), Gaps = 3/240 (1%)
Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
+ S++ I+ +F +S G A V +G AI+ F + + +P A G A
Sbjct: 99 AIASYSQAIKINPNFSELYISLGSALVQKGLLYEAIANFQKAISLEPESSIAHQNLGVAL 158
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q ++E I + +AI+ +P E +++ G A GE +A + KA + PNSA +
Sbjct: 159 EKQGQIEEGIICYRKAIEIDPGFWEGYQKLGIALTKQGEFHQAAKIYLKACQIIPNSATV 218
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
H G K + ++ A+ +KL+ + Y G L+ ++++A A+ +AI+
Sbjct: 219 YHHYGETLAKLRRWDEAIAAYRQAIKLEANSPVIYHQFGYVLTQKQQWEEAISAYRQAIK 278
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ N + + HL N E+A+ ++V + + YH G L L Q ++AI
Sbjct: 279 IKPNSPDVYHHLGDALTQQQNWEEAVGAYRKVTELQPNSPEVYHYFGYALSQLQQWEEAI 338
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GIA +G++ A I+ + + P G A R + AI+ + +AI+ +
Sbjct: 189 GIALTKQGEFHQAAKIYLKACQIIPNSATVYHHYGETLAKLRRWDEAIAAYRQAIKLEAN 248
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + + G + EAI +A++ +PNS D+ H G + +++ AV
Sbjct: 249 SPVIYHQFGYVLTQKQQWEEAISAYRQAIKIKPNSPDVYHHLGDALTQQQNWEEAVGAYR 308
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+L + Y Y G ALS + ++++A A+ KA +L N + L +L +
Sbjct: 309 KVTELQPNSPEVYHYFGYALSQLQQWEEAIVAYRKASELQPNSPDVHHQLGHALIELKQN 368
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+ A+ L+Q + ++ ++AY G L + Q +AI + ++P+ E
Sbjct: 369 DWAVVELRQAVELNPNLAEAYRDLGRALSNIKQWDEAIASFQGAIELNPNLAEVYGYLGK 428
Query: 628 CYHAIGEYREAVI 640
Y + ++ EA++
Sbjct: 429 AYASQKQWDEAIV 441
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A +G+ I + + ++ DP + E G A Q E A + +A Q P+
Sbjct: 155 GVALEKQGQIEEGIICYRKAIEIDPGFWEGYQKLGIALTKQGEFHQAAKIYLKACQIIPN 214
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ + G+ A L EAI +A++ E NS I H+ G V + + + A+
Sbjct: 215 SATVYHHYGETLAKLRRWDEAIAAYRQAIKLEANSPVIYHQFGYVLTQKQQWEEAISAYR 274
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+K+ + Y +LG AL+ +++A A+ K +L N E + + L
Sbjct: 275 QAIKIKPNSPDVYHHLGDALTQQQNWEEAVGAYRKVTELQPNSPEVYHYFGYALSQLQQW 334
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E+A+ ++ + +H G L L Q+ A+ +L + ++P+ E
Sbjct: 335 EEAIVAYRKASELQPNSPDVHHQLGHALIELKQNDWAVVELRQAVELNPNLAEAYRDLGR 394
Query: 628 CYHAIGEYREAV 639
I ++ EA+
Sbjct: 395 ALSNIKQWDEAI 406
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 7/220 (3%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P +G +LE A++ + + I+ NP+ + G A +G+ EA K
Sbjct: 12 PTQYFQQGQQAVAAGQLEKAVTLYKKTIELNPNLALYQQNLGDVLAKIGKWEEAATVYQK 71
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
A+E +P SA + G V K A+ S +K++ Y LG AL G
Sbjct: 72 AIELKPTSALSHYNLGNVQEKQGQLEQAIASYSQAIKINPNFSELYISLGSALVQKGLLY 131
Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
+A KAI L+ A +L + E+ + C ++ + ID F + Y G+
Sbjct: 132 EAIANFQKAISLEPESSIAHQNLGVALEKQGQIEEGIICYRKAIEIDPGFWEGYQKLGIA 191
Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
L G+ +A K I P++ A+ YH GE
Sbjct: 192 LTKQGEFHQAAKIYLKACQIIPNS-------ATVYHHYGE 224
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A ++ ++ AI + LK +P PE Q++ + AI + +AI+ +
Sbjct: 427 GKAYASQKQWDEAIVNYGHALKLNPKLPEVHHNLALTLVQQQKFDDAIVSYGQAIELGIN 486
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E + G + L EA+ +A E PNSA + H G + + ++ AV +
Sbjct: 487 TAEIHHQLGHTLSKLKRWDEAVISYRQAAEINPNSAAVYHVLGESLAQLEKWDEAVAAYT 546
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+L ++ ++G +S +G + +A EA+ KA++L + + L +
Sbjct: 547 KASQLHPKSADVRYHIGEVMSRLGRWDEAVEAYGKAVELRPSSAKFHFQLGEAKTKKNPL 606
Query: 568 EKALECLQQVLYIDKRFSKA 587
+A+ C ++ L ID FSKA
Sbjct: 607 TEAISCYRRALEIDPHFSKA 626
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 111/260 (42%), Gaps = 7/260 (2%)
Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K K S D G A + + A+ + ++ + P PE G A + ++ E A
Sbjct: 278 KIKPNSPDVYHHLGDALTQQQNWEEAVGAYRKVTELQPNSPEVYHYFGYALSQLQQWEEA 337
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I + +A + P++ + + G A L ++ A+ +L +A+E PN A+ + G
Sbjct: 338 IVAYRKASELQPNSPDVHHQLGHALIELKQNDWAVVELRQAVELNPNLAEAYRDLGRALS 397
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K ++ A+ ++L+ Y YLG A +S ++ +A + A++L+ E
Sbjct: 398 NIKQWDEAIASFQGAIELNPNLAEVYGYLGKAYASQKQWDEAIVNYGHALKLNPKLPEVH 457
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+L + A+ Q + + ++ +H G L L + +A+ I
Sbjct: 458 HNLALTLVQQQKFDDAIVSYGQAIELGINTAEIHHQLGHTLSKLKRWDEAVISYRQAAEI 517
Query: 615 DPSNIECLYLRASCYHAIGE 634
+P++ A+ YH +GE
Sbjct: 518 NPNS-------AAVYHVLGE 530
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 92/206 (44%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ + +A++ NP+ EA++ G+A + + + EAI A+E PN A++ G
Sbjct: 371 AVVELRQAVELNPNLAEAYRDLGRALSNIKQWDEAIASFQGAIELNPNLAEVYGYLGKAY 430
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
K ++ A+ + +KL+ + + L L L ++ A ++ +AI+L N E
Sbjct: 431 ASQKQWDEAIVNYGHALKLNPKLPEVHHNLALTLVQQQKFDDAIVSYGQAIELGINTAEI 490
Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
L L ++A+ +Q I+ + YH+ G L L + +A+ +
Sbjct: 491 HHQLGHTLSKLKRWDEAVISYRQAAEINPNSAAVYHVLGESLAQLEKWDEAVAAYTKASQ 550
Query: 614 IDPSNIECLYLRASCYHAIGEYREAV 639
+ P + + Y +G + EAV
Sbjct: 551 LHPKSADVRYHIGEVMSRLGRWDEAV 576
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 100/219 (45%), Gaps = 2/219 (0%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+ Q ++ +P EA G A + ++ + AI+ F AI+ NP+ E + G+A
Sbjct: 371 AVVELRQAVELNPNLAEAYRDLGRALSNIKQWDEAIASFQGAIELNPNLAEVYGYLGKAY 430
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
A+ + EAI + AL+ P ++ H + + + F+ A+ ++L
Sbjct: 431 ASQKQWDEAIVNYGHALKLNPKLPEVHHNLALTLVQQQKFDDAIVSYGQAIELGINTAEI 490
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
+ LG LS + + +A ++ +A +++ N + L + L ++A+ +
Sbjct: 491 HHQLGHTLSKLKRWDEAVISYRQAAEINPNSAAVYHVLGESLAQLEKWDEAVAAYTKASQ 550
Query: 580 IDKRFSKA-YHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ + + YH+ G ++ LG+ +A++ + + PS
Sbjct: 551 LHPKSADVRYHI-GEVMSRLGRWDEAVEAYGKAVELRPS 588
>gi|383112592|ref|ZP_09933384.1| hypothetical protein BSGG_0535 [Bacteroides sp. D2]
gi|313693000|gb|EFS29835.1| hypothetical protein BSGG_0535 [Bacteroides sp. D2]
Length = 676
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E R A+ + + A +D AIQ NP A++ RG
Sbjct: 38 YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 97
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + AI+D KAL ++P + + H + + + KD+NAA EDL + +K+
Sbjct: 98 LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYNAAKEDLESLLKVSPRY 157
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--------------------- 555
AY G + A KA++LD+ +AW
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNR 217
Query: 556 ---------------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
L +F+Q+ N A+ L ID ++ RGLL +G
Sbjct: 218 AIPLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGD 275
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D + ++P N+ ++ R G+YR A+
Sbjct: 276 DNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAI 314
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I ++ + KYA A + F++ + I R AR Q L A+SD+ A+ +
Sbjct: 197 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D ++ EP++ + RG++ + D+ A++D
Sbjct: 257 PNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 316
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
+ + + Y A IG+ K AE+ +K + Q+D+
Sbjct: 317 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEIKVMKAQIDK 361
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + + +A++ F++ L+ D P+A R + Q + A +DF AI
Sbjct: 162 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNRAIPL 221
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + R AR A+ D AL+ +PN+ + RG++ + D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIE 281
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D +K++ +N A GL + G+Y+ A + + I NFL +
Sbjct: 282 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 331
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G AI FD ++K +P A+ RG RA + AI D+T I
Sbjct: 265 NRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 324
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
P+ + +R +AR +G+ A QD K ++ A I + G+ N
Sbjct: 325 PNFLAGYYQRSEARRKIGDKKGAEQDEIKVMK-----AQIDKQNGVTN 367
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D+++ P + A R A ++ AAI D+ +AI+ NP +A+ RG LG
Sbjct: 585 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIIDYDKAIELNPDFADAYFNRGLTHIFLG 644
Query: 464 ESVEAIQDLSKALEF 478
+ I DLSKA E
Sbjct: 645 NNKLGISDLSKAGEL 659
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF I+
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKM 289
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG RA G+ AIQD + + PN ++R K D A +
Sbjct: 290 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 349
Query: 505 DLSACVK--LDKEN 516
D +K +DK+N
Sbjct: 350 DEIKVMKAQIDKQN 363
>gi|423344485|ref|ZP_17322197.1| hypothetical protein HMPREF1077_03627 [Parabacteroides johnsonii
CL02T12C29]
gi|409212883|gb|EKN05917.1| hypothetical protein HMPREF1077_03627 [Parabacteroides johnsonii
CL02T12C29]
Length = 707
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F + ++ I+ D L+ G + Y +I F+Q++K P E R A+
Sbjct: 10 FQLCSLAMFAQINTDRVLTIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKIN 69
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + A D T ++ NP +A+ RG AR + + EAI+D K LEF+ +L
Sbjct: 70 LDDYKGAEEDCTLCLERNPFLVQAYYARGIARQSQEKFDEAIEDYRKGLEFKAEDRQMLV 129
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ N + KDF A + + + Y G + G+ KA + KAI +D
Sbjct: 130 NMAVANIQKKDFKEAEKVFDELMVAHPKYSMNYLTRGAMYTEKGDTVKALADYDKAISMD 189
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+G+ + + N + AL L + + ++ R S Y RGL+ + L + A+ D
Sbjct: 190 PYYAPAYGNRAILHYQMNNMKDALADLNEAIRLNTRESGYYINRGLVRYQLKDLRGAMAD 249
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +D N+ + R IG+ A+
Sbjct: 250 YDQVVSMDSHNLIARFNRGLLRAQIGDNNRAI 281
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 111/243 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ K+ AI + + L+ + L+ A +++ + A F E + ++
Sbjct: 96 ARGIARQSQEKFDEAIEDYRKGLEFKAEDRQMLVNMAVANIQKKDFKEAEKVFDELMVAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++V+A+ D KA+ +P A R I++++ + A+ D
Sbjct: 156 PKYSMNYLTRGAMYTEKGDTVKALADYDKAISMDPYYAPAYGNRAILHYQMNNMKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ ++L+ Y GL + + + A + + + +D + L A + +
Sbjct: 216 LNEAIRLNTRESGYYINRGLVRYQLKDLRGAMADYDQVVSMDSHNLIARFNRGLLRAQIG 275
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++ +A+E V+ I+ AY+ R LL + G ++ ++ D L P+ + Y R
Sbjct: 276 DNNRAIEDFDVVIEIEPDNYMAYYNRALLRYETGDYQGSVHDFDVVLRQYPNFVAGYYSR 335
Query: 626 ASC 628
A
Sbjct: 336 AEV 338
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A RG R QR+ AAI D++EAIQ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRGNLRCAQRDFRAAIQDYSEAIQRDPEFAEAYFNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALEF 478
++ I DLSKA E
Sbjct: 678 DANRGIADLSKAGEL 692
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A+I +F+ I NP+ +A+ R + + EAI+D +K +E P+ A R +V
Sbjct: 495 ASIDNFSARIVKNPNDVDAYFGRALDFMLVQDFTEAIKDYTKVIELNPDFAMAYFNRAVV 554
Query: 493 NFKFKDFN-----AAVEDLSACVKLDKENKSAYTYLGLALS-----SIGEYKKAEEAHL- 541
+K D+N ++ +D SA K K+ A S S+ + K+A E +
Sbjct: 555 RYKQLDYNMSQAASSQDDFSAMSMNLKMGKNPTVVRTPATSDPASASLKDNKRAYEHEMI 614
Query: 542 -----KAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
I+L+ F+ A+ G+L +D A++ + + D F++AY RGL
Sbjct: 615 TRDYDMVIKLNPGFVYAYFNRGNLRCAQRDF---RAAIQDYSEAIQRDPEFAEAYFNRGL 671
Query: 594 LLHGLGQHKKAIKDLSSG--LGI 614
G + I DLS LGI
Sbjct: 672 ARLSQGDANRGIADLSKAGELGI 694
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA++ E+ D+ I+ NP A+ RG R A + AIQD S+A++ +P A+
Sbjct: 607 RAYEHEM--ITRDYDMVIKLNPGFVYAYFNRGNLRCAQRDFRAAIQDYSEAIQRDPEFAE 664
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG+ D N + DLS +L
Sbjct: 665 AYFNRGLARLSQGDANRGIADLSKAGEL 692
>gi|425447925|ref|ZP_18827906.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9443]
gi|389731403|emb|CCI04529.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 9443]
Length = 991
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + ++ + AISD+++AI NP+ EA+ RG + L + A+ D SKA++ P
Sbjct: 692 RGVLYSDLQKYDLAISDYSQAIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDINP 751
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A+ RG+ + + ++ A+ D + +++ + AY GL + +Y A +
Sbjct: 752 NLAEAYLNRGVFYYNQQKYDLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSDY 811
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI ++ + EA+ Y +L + AL Q + I+ ++AY RG+L + +
Sbjct: 812 DKAIDINHDLAEAYLGRGLLYYNLQKYDLALADYNQAIRINPNLAEAYGNRGVLYYNQQK 871
Query: 601 HKKAIKDLSSGL 612
++ A+ D S +
Sbjct: 872 YELALSDYSKAI 883
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 117/249 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + KY AIS + Q + +P EA RG + ++ + A+SDF++AI N
Sbjct: 691 NRGVLYSDLQKYDLAISDYSQAIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDIN 750
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ EA+ RG + A+ D KA++ N A + RG++ F + ++ A+ D
Sbjct: 751 PNLAEAYLNRGVFYYNQQKYDLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSD 810
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++ + AY GL ++ +Y A + +AI+++ N EA+G+ Y +
Sbjct: 811 YDKAIDINHDLAEAYLGRGLLYYNLQKYDLALADYNQAIRINPNLAEAYGNRGVLYYNQQ 870
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E AL + + ++K A GL+ + G +A + L I+ + E
Sbjct: 871 KYELALSDYSKAIELNKDAFIAMTNIGLIKYEQGAINEAAEQFKKALSINNQSAEIQLAL 930
Query: 626 ASCYHAIGE 634
A ++ GE
Sbjct: 931 AVVFYHQGE 939
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 10/251 (3%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK-RR 455
Y A+++ +Q + P P + + + + ++ T+AI P A AW R
Sbjct: 635 YEQALTVINQAISLFPNNPNSYNEKSSVLNQLNRYDEGLAAITQAINLAPRA--AWYYNR 692
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + L + AI D S+A++ PN A+ + RGI+ + ++ A+ D S + ++
Sbjct: 693 GVLYSDLQKYDLAISDYSQAIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDINPN 752
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
AY G+ + +Y A + KAI ++RN A+ + Y DL + AL
Sbjct: 753 LAEAYLNRGVFYYNQQKYDLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSDYD 812
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH----- 630
+ + I+ ++AY RGLL + L ++ A+ D + + I+P+ E R Y+
Sbjct: 813 KAIDINHDLAEAYLGRGLLYYNLQKYDLALADYNQAIRINPNLAEAYGNRGVLYYNQQKY 872
Query: 631 --AIGEYREAV 639
A+ +Y +A+
Sbjct: 873 ELALSDYSKAI 883
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG+ N+ KY A+S +D+ + + A RG ++ + A+SD+ +AI
Sbjct: 758 LNRGVFYYNQQKYDLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSDYDKAIDI 817
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N EA+ RG L + A+ D ++A+ PN A+ RG++ + + + A+
Sbjct: 818 NHDLAEAYLGRGLLYYNLQKYDLALADYNQAIRINPNLAEAYGNRGVLYYNQQKYELALS 877
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S ++L+K+ A T +GL G +A E KA+ ++ E L +
Sbjct: 878 DYSKAIELNKDAFIAMTNIGLIKYEQGAINEAAEQFKKALSINNQSAEIQLALAVVFYHQ 937
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLR 591
+KAL+ + L ID +F+ L+
Sbjct: 938 GEKDKALKLAESALKIDSQFANIDFLK 964
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 117/239 (48%), Gaps = 2/239 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGI + KY A+S F + + +P EA + RG Q++ + A+SD+ +AI N
Sbjct: 725 NRGILYSDLQKYDLALSDFSKAIDINPNLAEAYLNRGVFYYNQQKYDLALSDYDKAIDIN 784
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ RG L + A+ D KA++ + A+ RG++ + + ++ A+ D
Sbjct: 785 RNDAVAYYNRGLLYFDLQKYDLALSDYDKAIDINHDLAEAYLGRGLLYYNLQKYDLALAD 844
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++++ AY G+ + +Y+ A + KAI+L+++ A ++ +
Sbjct: 845 YNQAIRINPNLAEAYGNRGVLYYNQQKYELALSDYSKAIELNKDAFIAMTNIGLIKYEQG 904
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP--SNIECL 622
+A E ++ L I+ + ++ ++ + G+ KA+K S L ID +NI+ L
Sbjct: 905 AINEAAEQFKKALSINNQSAEIQLALAVVFYHQGEKDKALKLAESALKIDSQFANIDFL 963
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 124/311 (39%), Gaps = 46/311 (14%)
Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE---DPMYPEALIGRGTA----- 424
I + + D + RG G++ AI FD+ +K+ D +Y A G+G A
Sbjct: 534 IVPNTNAKADIWIQRGGQLWRLGRFEEAIKAFDEAIKQNESDNVY-LAWYGKGLALFALD 592
Query: 425 ------RAFQREL------------------------------EAAISDFTEAIQSNPSA 448
A Q+ + E A++ +AI P+
Sbjct: 593 KDQPAIEALQQAINTLPKREDLKNFHSSILQRQSVVYRYLENYEQALTVINQAISLFPNN 652
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
++ + L E + +++A+ P +A + RG++ + ++ A+ D S
Sbjct: 653 PNSYNEKSSVLNQLNRYDEGLAAITQAINLAPRAA-WYYNRGVLYSDLQKYDLAISDYSQ 711
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
+ ++ AY G+ S + +Y A KAI ++ N EA+ + FY + +
Sbjct: 712 AIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDINPNLAEAYLNRGVFYYNQQKYD 771
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
AL + + I++ + AY+ RGLL L ++ A+ D + I+ E R
Sbjct: 772 LALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSDYDKAIDINHDLAEAYLGRGLL 831
Query: 629 YHAIGEYREAV 639
Y+ + +Y A+
Sbjct: 832 YYNLQKYDLAL 842
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 101/263 (38%), Gaps = 55/263 (20%)
Query: 429 RELEAAISDFTEAIQSNPSA-GEAWKRRGQARAALGESVEAIQDLSKALEFE-------- 479
++LE I+ T I N +A + W +RG LG EAI+ +A++
Sbjct: 522 QKLEIFIA-ITGVIVPNTNAKADIWIQRGGQLWRLGRFEEAIKAFDEAIKQNESDNVYLA 580
Query: 480 ----------------------------PNSAD-------ILHERGIVNFKFKDFNAAVE 504
P D IL + +V +++ A+
Sbjct: 581 WYGKGLALFALDKDQPAIEALQQAINTLPKREDLKNFHSSILQRQSVVYRYLENYEQALT 640
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-LTQFYQD 563
++ + L N ++Y L+ + Y + A +AI L AW + Y D
Sbjct: 641 VINQAISLFPNNPNSYNEKSSVLNQLNRYDEGLAAITQAINLAPR--AAWYYNRGVLYSD 698
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
L + A+ Q + I+ ++AY+ RG+L L ++ A+ D S + I+P+ E
Sbjct: 699 LQKYDLAISDYSQAIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDINPNLAEAYL 758
Query: 624 LRASCYH-------AIGEYREAV 639
R Y+ A+ +Y +A+
Sbjct: 759 NRGVFYYNQQKYDLALSDYDKAI 781
>gi|27375838|ref|NP_767367.1| hypothetical protein blr0727 [Bradyrhizobium japonicum USDA 110]
gi|27348976|dbj|BAC45992.1| blr0727 [Bradyrhizobium japonicum USDA 110]
Length = 370
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 130/280 (46%), Gaps = 4/280 (1%)
Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
KR+K S + I +F + RG A +G A++ +++ ++ DP Y +
Sbjct: 62 KRDKDRAFEDCSAAIRIDPNFGRAYNCRGRAYSAKGDRDRAMADYNEAIRLDPGYGPSYT 121
Query: 420 GRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
R +R+ + AI+ FTEAI+ NP A A RG+A AA G++ A+ D ++A++
Sbjct: 122 SRAQEYFNRRDFDLAIAGFTEAIERNPKQAYFATVMRGEAYAAKGDTDHAVADYTEAMQR 181
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
P +A R V+F + + A++D ++ V+L+ + + + L + A
Sbjct: 182 NPAAAWPYELRSAVHFDKGEIDEALDDCNSAVRLEPGSAGGHYCRAVVLVKKDDPDGAIR 241
Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
+ ++ F++A+ + + + A+ + + + S AY+ R +
Sbjct: 242 EFDEVTRIAPAFVKAYLARAVAWHKKGDDKHAIADFDEAIRLQPGNSTAYNNRAAAFRDM 301
Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
GQH +A+ D + L +DP N + L R Y + + + A
Sbjct: 302 GQHDRALADYNEALRLDPKNQDVLANRGLLYMMMSDAKHA 341
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 1/234 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAIQS 444
SR N + AI+ F + ++ +P A + RG A A + + + A++D+TEA+Q
Sbjct: 122 SRAQEYFNRRDFDLAIAGFTEAIERNPKQAYFATVMRGEAYAAKGDTDHAVADYTEAMQR 181
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+A ++ R GE EA+ D + A+ EP SA + R +V K D + A+
Sbjct: 182 NPAAAWPYELRSAVHFDKGEIDEALDDCNSAVRLEPGSAGGHYCRAVVLVKKDDPDGAIR 241
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++ AY +A G+ K A +AI+L A+ + ++D+
Sbjct: 242 EFDEVTRIAPAFVKAYLARAVAWHKKGDDKHAIADFDEAIRLQPGNSTAYNNRAAAFRDM 301
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++AL + L +D + RGLL + K A D +S L + P++
Sbjct: 302 GQHDRALADYNEALRLDPKNQDVLANRGLLYMMMSDAKHARADFNSVLALPPTD 355
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R + V + AI FD++ + P + +A + R A + + + AI+DF EAI+ P
Sbjct: 226 RAVVLVKKDDPDGAIREFDEVTRIAPAFVKAYLARAVAWHKKGDDKHAIADFDEAIRLQP 285
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ R A +G+ A+ D ++AL +P + D+L RG++ D A D
Sbjct: 286 GNSTAYNNRAAAFRDMGQHDRALADYNEALRLDPKNQDVLANRGLLYMMMSDAKHARADF 345
Query: 507 SACVKLDKENKSA 519
++ + L +K A
Sbjct: 346 NSVLALPPTDKWA 358
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 5/195 (2%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I++ TE I ++P+ A++ RG+A + A +D S A+ +PN + RG
Sbjct: 35 IAEKTEIIVADPTNAVAYELRGEAWYMKRDKDRAFEDCSAAIRIDPNFGRAYNCRGRAYS 94
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D + A+ D + ++LD +YT + ++ A +AI+ RN +A+
Sbjct: 95 AKGDRDRAMADYNEAIRLDPGYGPSYTSRAQEYFNRRDFDLAIAGFTEAIE--RNPKQAY 152
Query: 555 GHLT---QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ Y +++ A+ + + + + Y LR + G+ +A+ D +S
Sbjct: 153 FATVMRGEAYAAKGDTDHAVADYTEAMQRNPAAAWPYELRSAVHFDKGEIDEALDDCNSA 212
Query: 612 LGIDPSNIECLYLRA 626
+ ++P + Y RA
Sbjct: 213 VRLEPGSAGGHYCRA 227
>gi|209527987|ref|ZP_03276470.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
gi|209491584|gb|EDZ91956.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
Length = 265
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFE 479
RG AR + + + AI+DFT+AI+ N + A+ RG R +G ++ EAI D ++A+
Sbjct: 48 RGVARYQRGDKQGAIADFTQAIRLNRNHALAYYNRGVVRFRIGNNLTEAIADFTQAIRIN 107
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P D + R I K + + A++D++ + LD + A+ GL S
Sbjct: 108 PEYVDAYYNRAIARVKVQQYWPAIDDVTQVISLDPSHDRAFYLRGLIYS----------- 156
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
++L + + + + + ++ R Y RG + +G
Sbjct: 157 ----------------------ENLKDYQTGINDFTEAIRLNPRNPAPYFKRGNARYRIG 194
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
++AI D + + I+PS+ E Y RA + IG+ + A+
Sbjct: 195 DRERAIDDYNKAIDINPSDPEPYYNRAISRYQIGDRQGAIF 235
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQ 443
RG+A+ G AI+ F Q ++ + + A RG R L AI+DFT+AI+
Sbjct: 46 FERGVARYQRGDKQGAIADFTQAIRLNRNHALAYYNRGVVRFRIGNNLTEAIADFTQAIR 105
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-NFKFKDFNAA 502
NP +A+ R AR + + AI D+++ + +P+ + RG++ + KD+
Sbjct: 106 INPEYVDAYYNRAIARVKVQQYWPAIDDVTQVISLDPSHDRAFYLRGLIYSENLKDYQTG 165
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ D + ++L+ N + Y G A IG+ ++A + + KAI ++
Sbjct: 166 INDFTEAIRLNPRNPAPYFKRGNARYRIGDRERAIDDYNKAIDIN 210
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFT 439
VD +R IA+V +Y AI Q++ DP + A RG + ++ + I+DFT
Sbjct: 111 VDAYYNRAIARVKVQQYWPAIDDVTQVISLDPSHDRAFYLRGLIYSENLKDYQTGINDFT 170
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
EAI+ NP + +RG AR +G+ AI D +KA++ P+ + + R I ++ D
Sbjct: 171 EAIRLNPRNPAPYFKRGNARYRIGDRERAIDDYNKAIDINPSDPEPYYNRAISRYQIGDR 230
Query: 500 NAAVEDL--SACVKLDKENKSAY 520
A+ DL SA + LD N Y
Sbjct: 231 QGAIFDLQKSADLYLDLGNFEKY 253
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
F L I N Y + I+ F + ++ +P P RG AR + E AI D+ +AI
Sbjct: 148 FYLRGLIYSENLKDYQTGINDFTEAIRLNPRNPAPYFKRGNARYRIGDRERAIDDYNKAI 207
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
NPS E + R +R +G+ AI DL K SAD+ + G F+ + A
Sbjct: 208 DINPSDPEPYYNRAISRYQIGDRQGAIFDLQK-------SADLYLDLG----NFEKYQKA 256
Query: 503 VEDL 506
++ L
Sbjct: 257 IDTL 260
>gi|425449701|ref|ZP_18829537.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 7941]
gi|389769861|emb|CCI05465.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
PCC 7941]
Length = 957
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 2/224 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG ++ KY A+ +++ ++ +P + A RG + Q++ + A+SD+ +AI N
Sbjct: 707 NRGNLYRDQQKYKLALDDYNKAIELNPNHAGAYYNRGLLYSDQKKYDLALSDYDKAIDIN 766
Query: 446 PSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P+ EA+ RG L E E A+ D KA+E PN A + RG + + ++ A+
Sbjct: 767 PNYAEAYVNRG-VLYRLQEKYELALADYDKAIELNPNDAVAYYNRGNLYKNLQKYDLALS 825
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D S + ++ AY G+ +Y+ A + KAI ++ + EA+ Y
Sbjct: 826 DYSKAIDINPNYAEAYNNRGVLYRLQEKYELALADYDKAIDINHDLAEAYFGRGILYYHQ 885
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
E AL L QV+ I+ ++AY RG+L L Q +KA DL
Sbjct: 886 KKYELALADLTQVIDINPNLAQAYLGRGVLYAELKQTEKAKIDL 929
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 96/191 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ ++ KY A+S +D+ + +P Y EA + RG Q + E A++D+ +AI+ N
Sbjct: 741 NRGLLYSDQKKYDLALSDYDKAIDINPNYAEAYVNRGVLYRLQEKYELALADYDKAIELN 800
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG L + A+ D SKA++ PN A+ + RG++ + + A+ D
Sbjct: 801 PNDAVAYYNRGNLYKNLQKYDLALSDYSKAIDINPNYAEAYNNRGVLYRLQEKYELALAD 860
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++ + AY G+ +Y+ A + I ++ N +A+ Y +L
Sbjct: 861 YDKAIDINHDLAEAYFGRGILYYHQKKYELALADLTQVIDINPNLAQAYLGRGVLYAELK 920
Query: 566 NSEKALECLQQ 576
+EKA LQQ
Sbjct: 921 QTEKAKIDLQQ 931
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 1/211 (0%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG Q++ + A+ D+ +AI+ NP+ A+ RG + + A+ D KA++ P
Sbjct: 708 RGNLYRDQQKYKLALDDYNKAIELNPNHAGAYYNRGLLYSDQKKYDLALSDYDKAIDINP 767
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N A+ RG++ + + A+ D ++L+ + AY G ++ +Y A +
Sbjct: 768 NYAEAYVNRGVLYRLQEKYELALADYDKAIELNPNDAVAYYNRGNLYKNLQKYDLALSDY 827
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI ++ N+ EA+ + Y+ E AL + + I+ ++AY RG+L + +
Sbjct: 828 SKAIDINPNYAEAYNNRGVLYRLQEKYELALADYDKAIDINHDLAEAYFGRGILYYHQKK 887
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
++ A+ DL+ + I+P N+ YL +A
Sbjct: 888 YELALADLTQVIDINP-NLAQAYLGRGVLYA 917
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 123/278 (44%), Gaps = 6/278 (2%)
Query: 366 KKF---CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
KKF + R S S DF S G + Y A+++ +Q + P P +
Sbjct: 617 KKFHSSILQRQSVVYSFLGDFSTSAGREREARENYEQALTVINQAISLVPNNPNHYNEKS 676
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAW-KRRGQARAALGESVEAIQDLSKALEFEPN 481
+ + + + ++ T+AI+ P A W RG + A+ D +KA+E PN
Sbjct: 677 SVLSRLKRYDEGLAAITQAIELAPRA--VWYGNRGNLYRDQQKYKLALDDYNKAIELNPN 734
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
A + RG++ K ++ A+ D + ++ AY G+ +Y+ A +
Sbjct: 735 HAGAYYNRGLLYSDQKKYDLALSDYDKAIDINPNYAEAYVNRGVLYRLQEKYELALADYD 794
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
KAI+L+ N A+ + Y++L + AL + + I+ +++AY+ RG+L ++
Sbjct: 795 KAIELNPNDAVAYYNRGNLYKNLQKYDLALSDYSKAIDINPNYAEAYNNRGVLYRLQEKY 854
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ A+ D + I+ E + R Y+ +Y A+
Sbjct: 855 ELALADYDKAIDINHDLAEAYFGRGILYYHQKKYELAL 892
>gi|299149165|ref|ZP_07042226.1| TPR domain protein [Bacteroides sp. 3_1_23]
gi|423287416|ref|ZP_17266267.1| hypothetical protein HMPREF1069_01310 [Bacteroides ovatus
CL02T12C04]
gi|298512832|gb|EFI36720.1| TPR domain protein [Bacteroides sp. 3_1_23]
gi|392672531|gb|EIY65998.1| hypothetical protein HMPREF1069_01310 [Bacteroides ovatus
CL02T12C04]
Length = 676
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E R A+ + + A +D AIQ NP A++ RG
Sbjct: 38 YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 97
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + AI+D KAL ++P + + H + + + KD+NAA EDL + +K+
Sbjct: 98 LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYNAAKEDLESLLKVSPRY 157
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--------------------- 555
AY G + A KA++LD+ +AW
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNR 217
Query: 556 ---------------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
L +F+Q+ N A+ L ID ++ RGLL +G
Sbjct: 218 AIPLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGD 275
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D + ++P N+ ++ R G+YR A+
Sbjct: 276 DNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAI 314
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I ++ + KYA A + F++ + I R AR Q L A+SD+ A+ +
Sbjct: 197 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D ++ EP++ + RG++ + D+ A++D
Sbjct: 257 PNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 316
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
+ + + Y A IG+ K AE+ K + Q+D+
Sbjct: 317 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDK 361
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + + +A++ F++ L+ D P+A R + Q + A +DF AI
Sbjct: 162 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNRAIPL 221
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + R AR A+ D AL+ +PN+ + RG++ + D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIE 281
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D +K++ +N A GL + G+Y+ A + + I NFL +
Sbjct: 282 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 331
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G AI FD ++K +P A+ RG RA + AI D+T I
Sbjct: 265 NRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 324
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
P+ + +R +AR +G+ A QD EF+ A I + G+ N
Sbjct: 325 PNFLAGYYQRSEARRKIGDKKGAEQD-----EFKVMKAQIDKQNGVTN 367
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D+++ P + A R A ++ AAI D+ +AI+ NP +A+ RG LG
Sbjct: 585 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIIDYDKAIELNPDFADAYFNRGLTHIFLG 644
Query: 464 ESVEAIQDLSKALEF 478
+ I DLSKA E
Sbjct: 645 NNKLGISDLSKAGEL 659
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF I+
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKM 289
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG RA G+ AIQD + + PN ++R K D A +
Sbjct: 290 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 349
Query: 505 DLSACVK--LDKEN 516
D +K +DK+N
Sbjct: 350 DEFKVMKAQIDKQN 363
>gi|154490271|ref|ZP_02030532.1| hypothetical protein PARMER_00503 [Parabacteroides merdae ATCC
43184]
gi|423721808|ref|ZP_17695984.1| hypothetical protein HMPREF1078_00047 [Parabacteroides merdae
CL09T00C40]
gi|154089163|gb|EDN88207.1| tetratricopeptide repeat protein [Parabacteroides merdae ATCC
43184]
gi|409242821|gb|EKN35580.1| hypothetical protein HMPREF1078_00047 [Parabacteroides merdae
CL09T00C40]
Length = 707
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%)
Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
F + ++ I+ D L+ G + Y +I F+Q++K P E R A+
Sbjct: 10 FQLCSLAMFAQINTDRVLTIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKIN 69
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ + A D T ++ NP +A+ RG AR + + EAI+D K LEF+ +L
Sbjct: 70 LDDYKGAEEDCTLCLERNPFLVQAYYARGIARQSQEKFDEAIEDYRKGLEFKAEDRQMLV 129
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
+ N + KDF A + + + Y G + G+ KA + KAI +D
Sbjct: 130 NVAVANIQKKDFKEAEKVFDELMTAHPKYSMNYLTRGAMYTEKGDTVKALADYDKAISMD 189
Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
+ A+G+ + + N + AL L + + ++ R S Y RGL+ + L + A+ D
Sbjct: 190 PYYAPAYGNRAILHYQMNNMKDALADLNEAIRLNTRESGYYINRGLVRYQLKDLRGAMAD 249
Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +D N+ + R IG+ A+
Sbjct: 250 YDQVVSMDSHNLIARFNRGLLRAQIGDNNRAI 281
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 111/243 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ ++ K+ AI + + L+ + L+ A +++ + A F E + ++
Sbjct: 96 ARGIARQSQEKFDEAIEDYRKGLEFKAEDRQMLVNVAVANIQKKDFKEAEKVFDELMTAH 155
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P + RG G++V+A+ D KA+ +P A R I++++ + A+ D
Sbjct: 156 PKYSMNYLTRGAMYTEKGDTVKALADYDKAISMDPYYAPAYGNRAILHYQMNNMKDALAD 215
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L+ ++L+ Y GL + + + A + + + +D + L A + +
Sbjct: 216 LNEAIRLNTRESGYYINRGLVRYQLKDLRGAMADYDQVVSMDSHNLIARFNRGLLRAQIG 275
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++ +A+E V+ I+ AY+ R LL + G ++ ++ D L P+ + Y R
Sbjct: 276 DNNRAIEDFDVVIEIEPDNYMAYYNRALLRYETGDYQGSVHDFDVVLRQYPNFVAGYYSR 335
Query: 626 ASC 628
A
Sbjct: 336 AEV 338
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
+D ++K +P + A RG R QR+ AAI D++EAIQ +P EA+ RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRGNLRCAQRDFRAAIQDYSEAIQRDPEFAEAYFNRGLARLSQG 677
Query: 464 ESVEAIQDLSKALEF 478
++ I DLSKA E
Sbjct: 678 DANRGIADLSKAGEL 692
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L+RG +G A++ +D+ + DP Y A R ++ A++D EAI+
Sbjct: 163 LTRGAMYTEKGDTVKALADYDKAISMDPYYAPAYGNRAILHYQMNNMKDALADLNEAIRL 222
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
N + RG R L + A+ D + + + ++ RG++ + D N A+E
Sbjct: 223 NTRESGYYINRGLVRYQLKDLRGAMADYDQVVSMDSHNLIARFNRGLLRAQIGDNNRAIE 282
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYK 534
D ++++ +N AY L G+Y+
Sbjct: 283 DFDVVIEIEPDNYMAYYNRALLRYETGDYQ 312
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
A+I +F+ I NP+ +A+ R + + EAI+D +K +E +P+ A R +V
Sbjct: 495 ASIDNFSARIVKNPNDVDAYFGRALDFMLVQDFTEAIKDYTKVIELDPDFAMAYFNRAVV 554
Query: 493 NFKFKDFN-----AAVEDLSACVKLDKENKSAYTYLGLALS-----SIGEYKKAEEAHL- 541
+K D+N ++ +D SA K K+ A S S+ + K+A E +
Sbjct: 555 RYKQLDYNMSQAASSQDDFSAMSMNLKMGKNPTVVRTPATSDPASASLKDNKRAYEHEMI 614
Query: 542 -----KAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
I+L+ F+ A+ G+L +D A++ + + D F++AY RGL
Sbjct: 615 TRDYDMVIKLNPGFVYAYFNRGNLRCAQRDF---RAAIQDYSEAIQRDPEFAEAYFNRGL 671
Query: 594 LLHGLGQHKKAIKDLSSG--LGI 614
G + I DLS LGI
Sbjct: 672 ARLSQGDANRGIADLSKAGELGI 694
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
RA++ E+ D+ I+ NP A+ RG R A + AIQD S+A++ +P A+
Sbjct: 607 RAYEHEM--ITRDYDMVIKLNPGFVYAYFNRGNLRCAQRDFRAAIQDYSEAIQRDPEFAE 664
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
RG+ D N + DLS +L
Sbjct: 665 AYFNRGLARLSQGDANRGIADLSKAGEL 692
>gi|225620729|ref|YP_002721987.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215549|gb|ACN84283.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 771
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 115/246 (46%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
E K+ I + D+ +++D A R + + I + ++I+ NP+ +A+
Sbjct: 15 EKKFTEIIKLCDEAIEKDDKDEYAYFIRANCYFDLKNYDMVIENLNKSIELNPNNEKAYF 74
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG + L E+I D +K E PN RG++ + + A++D + ++L+
Sbjct: 75 NRGFIESNLEMYEESINDYTKVTELNPNDEKAYFNRGLIKSNLEMYKEAIDDYTKVIELN 134
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
N+ AY G A S++ Y++A ++ I+L+ N A+ ++ DL E+A+
Sbjct: 135 PNNEIAYINRGFAKSNLEMYEEAIHDYINVIELNPNNKLAYINIGFTKSDLKMYEEAIYY 194
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + +D +Y RG L +++AIKD + ++P++ + RA +
Sbjct: 195 FNKSIELDPNDKISYISRGFSKLNLKMYEEAIKDFDKVIELNPNDESAYFNRALSKLNLE 254
Query: 634 EYREAV 639
Y EA+
Sbjct: 255 IYEEAI 260
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 16/249 (6%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG+ + N Y AI + ++++ +P A I RG A++ E AI D+ I+
Sbjct: 108 FNRGLIKSNLEMYKEAIDDYTKVIELNPNNEIAYINRGFAKSNLEMYEEAIHDYINVIEL 167
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ G ++ L EAI +K++E +PN RG K + A++
Sbjct: 168 NPNNKLAYINIGFTKSDLKMYEEAIYYFNKSIELDPNDKISYISRGFSKLNLKMYEEAIK 227
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D ++L+ ++SAY L+ ++ Y++A + K I+ + + +L + +
Sbjct: 228 DFDKVIELNPNDESAYFNRALSKLNLEIYEEAIKDFTKVIEANNK--NEYAYLLIVFAQI 285
Query: 565 ANSEKALECLQQVLYIDKRFS-----KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
N +K E + YIDK Y+LR L LG++ +AI D+++ + +D
Sbjct: 286 -NLKKYRESIN---YIDKAIELNNNRYWYYLRFLSKINLGKYNEAINDINNFIQLDK--- 338
Query: 620 ECLYLRASC 628
++L+ C
Sbjct: 339 --IHLKIPC 345
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+RG + N Y +I+ + ++ + +P +A RG ++ + AI D+T+ I+
Sbjct: 74 FNRGFIESNLEMYEESINDYTKVTELNPNDEKAYFNRGLIKSNLEMYKEAIDDYTKVIEL 133
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP+ A+ RG A++ L EAI D +E PN+ G K + A+
Sbjct: 134 NPNNEIAYINRGFAKSNLEMYEEAIHDYINVIELNPNNKLAYINIGFTKSDLKMYEEAIY 193
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ ++LD +K +Y G + ++ Y++A + K I+L+ N A+ + +L
Sbjct: 194 YFNKSIELDPNDKISYISRGFSKLNLKMYEEAIKDFDKVIELNPNDESAYFNRALSKLNL 253
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
E+A++ +V+ + + AY L L +++++I + + ++ +N YL
Sbjct: 254 EIYEEAIKDFTKVIEANNKNEYAYLLIVFAQINLKKYRESINYIDKAIELN-NNRYWYYL 312
Query: 625 RASCYHAIGEYREAV 639
R +G+Y EA+
Sbjct: 313 RFLSKINLGKYNEAI 327
>gi|336405599|ref|ZP_08586276.1| hypothetical protein HMPREF0127_03589 [Bacteroides sp. 1_1_30]
gi|336417227|ref|ZP_08597553.1| hypothetical protein HMPREF1017_04661 [Bacteroides ovatus
3_8_47FAA]
gi|423297785|ref|ZP_17275845.1| hypothetical protein HMPREF1070_04510 [Bacteroides ovatus
CL03T12C18]
gi|335936425|gb|EGM98355.1| hypothetical protein HMPREF1017_04661 [Bacteroides ovatus
3_8_47FAA]
gi|335937470|gb|EGM99370.1| hypothetical protein HMPREF0127_03589 [Bacteroides sp. 1_1_30]
gi|392665143|gb|EIY58675.1| hypothetical protein HMPREF1070_04510 [Bacteroides ovatus
CL03T12C18]
Length = 676
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E R A+ + + A +D AIQ NP A++ RG
Sbjct: 38 YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 97
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + AI+D KAL ++P + + H + + + KD+NAA EDL + +K+
Sbjct: 98 LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYNAAKEDLESLLKVSPRY 157
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--------------------- 555
AY G + A KA++LD+ +AW
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNR 217
Query: 556 ---------------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
L +F+Q+ N A+ L ID ++ RGLL +G
Sbjct: 218 AIPLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGD 275
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D + ++P N+ ++ R G+YR A+
Sbjct: 276 DNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAI 314
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I ++ + KYA A + F++ + I R AR Q L A+SD+ A+ +
Sbjct: 197 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D ++ EP++ + RG++ + D+ A++D
Sbjct: 257 PNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 316
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
+ + + Y A IG+ K AE+ K + Q+D+
Sbjct: 317 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDK 361
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + + +A++ F++ L+ D P+A R + Q + A +DF AI
Sbjct: 162 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNRAIPL 221
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + R AR A+ D AL+ +PN+ + RG++ + D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIE 281
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D +K++ +N A GL + G+Y+ A + + I NFL +
Sbjct: 282 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 331
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G AI FD ++K +P A+ RG RA + AI D+T I
Sbjct: 265 NRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 324
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
P+ + +R +AR +G+ A QD EF+ A I + G+ N
Sbjct: 325 PNFLAGYYQRSEARRKIGDKKGAEQD-----EFKVMKAQIDKQNGVTN 367
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D+++ P + A R A ++ AAI D+ +AI+ NP +A+ RG LG
Sbjct: 585 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIIDYDKAIELNPDFADAYFNRGLTHIFLG 644
Query: 464 ESVEAIQDLSKALEF 478
+ I DLSKA E
Sbjct: 645 NNKLGISDLSKAGEL 659
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF I+
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKM 289
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG RA G+ AIQD + + PN ++R K D A +
Sbjct: 290 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 349
Query: 505 DLSACVK--LDKEN 516
D +K +DK+N
Sbjct: 350 DEFKVMKAQIDKQN 363
>gi|224539753|ref|ZP_03680292.1| hypothetical protein BACCELL_04662 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518631|gb|EEF87736.1| hypothetical protein BACCELL_04662 [Bacteroides cellulosilyticus
DSM 14838]
Length = 679
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 114/279 (40%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E RG A+ + + A +D AIQ NP A++ RG
Sbjct: 38 YVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDFQGAEADCNAAIQRNPFVVGAYQIRG 97
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR AI+D AL+++P + + H + + + +D+ AA EDL +K+
Sbjct: 98 LARIRQNNYDGAIEDYKTALKYDPENLVLWHNLSLCHMQKEDYGAAKEDLGKLLKIAPRY 157
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--------------------- 555
AY G + +A KAI++DR + WG
Sbjct: 158 TRAYLMRGEVSLKQKDTIQALNDFEKAIEMDRYDPDGWGARAIVRLQQGKYADAEADLDH 217
Query: 556 --HLT-------------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
HL+ +F+Q+ N A+ L ID ++ RGLL +G
Sbjct: 218 SIHLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGD 275
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D L I+P N+ + R G YR A+
Sbjct: 276 DNRAIEDFDFVLQIEPDNMMATFNRGLLRAQTGNYRGAI 314
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I ++ +GKYA A + D + I R AR Q L A+SD+ A+ +
Sbjct: 197 ARAIVRLQQGKYADAEADLDHSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D L+ EP++ RG++ + ++ A+ D
Sbjct: 257 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLQIEPDNMMATFNRGLLRAQTGNYRGAISD 316
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
S + + Y + A IG+ K AE+ K +++
Sbjct: 317 YSKVIDEYPNFMAGYYHRAEARKKIGDRKGAEQDEFKLMKM 357
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 115/276 (41%), Gaps = 13/276 (4%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI---GRGTAR 425
C I ++ + +++ RG+A++ + Y AI + LK DP E L+
Sbjct: 79 CNAAIQRNPFVVGAYQI-RGLARIRQNNYDGAIEDYKTALKYDP---ENLVLWHNLSLCH 134
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AA D + ++ P A+ RG+ ++++A+ D KA+E + D
Sbjct: 135 MQKEDYGAAKEDLGKLLKIAPRYTRAYLMRGEVSLKQKDTIQALNDFEKAIEMDRYDPDG 194
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
R IV + + A DL + L +N Y LA + A + A+
Sbjct: 195 WGARAIVRLQQGKYADAEADLDHSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALD 254
Query: 546 LD-RNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
+D NFL GH + + + +A+E VL I+ A RGLL G ++
Sbjct: 255 IDPNNFL---GHYNRGLLRAQVGDDNRAIEDFDFVLQIEPDNMMATFNRGLLRAQTGNYR 311
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
AI D S + P+ + Y RA IG+ + A
Sbjct: 312 GAISDYSKVIDEYPNFMAGYYHRAEARKKIGDRKGA 347
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 57/137 (41%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF +Q
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLQI 289
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG RA G AI D SK ++ PN + R K D A +
Sbjct: 290 EPDNMMATFNRGLLRAQTGNYRGAISDYSKVIDEYPNFMAGYYHRAEARKKIGDRKGAEQ 349
Query: 505 DLSACVKLDKENKSAYT 521
D +K+ + ++ T
Sbjct: 350 DEFKLMKMQIDKRNGVT 366
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 33/158 (20%)
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK------ 542
RG+ + +DF ++++D + + LD + AY L EYKKAE A L
Sbjct: 508 RGLDFYLVQDFASSIDDFTQAILLDDKFFPAYFMRALVRYKQLEYKKAE-AELTEGVPGA 566
Query: 543 ------------------------AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
IQL +F+ + + L + ALE + +
Sbjct: 567 SSDSKKQPEVTSIDYDIVKNDLDHVIQLAPDFVYGYYNRANVLSMLKDYRGALEDYNKAI 626
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
++K F++AY RGL LG +K+ I DLS LGI
Sbjct: 627 ELNKDFAEAYFNRGLTHIFLGNNKQGITDLSKAGELGI 664
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D +++ P + R + ++ A+ D+ +AI+ N EA+ RG LG
Sbjct: 588 LDHVIQLAPDFVYGYYNRANVLSMLKDYRGALEDYNKAIELNKDFAEAYFNRGLTHIFLG 647
Query: 464 ESVEAIQDLSKALEF 478
+ + I DLSKA E
Sbjct: 648 NNKQGITDLSKAGEL 662
>gi|421838039|ref|ZP_16272037.1| hypothetical protein CFSAN001627_20655, partial [Clostridium
botulinum CFSAN001627]
gi|409739661|gb|EKN40275.1| hypothetical protein CFSAN001627_20655, partial [Clostridium
botulinum CFSAN001627]
Length = 219
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 34/213 (15%)
Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
+ +++ I +T +I+ PS +A+ R + LGE ++I D +K LE P D
Sbjct: 34 YSSDIKDKIKFYTISIKLKPSFIDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCY 93
Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
+ R IV + K+++ +++DL V +DK K+ Y G+ I +YK+A KAI
Sbjct: 94 NNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHE 153
Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
D R S+AY R + L ++ +IK
Sbjct: 154 DS----------------------------------RDSEAYENRAFTYYNLKKYSSSIK 179
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D ++ L + P N R + Y+ I Y A+
Sbjct: 180 DYTNALKLTPENKNIYLNRGTIYYKIKNYENAI 212
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 1/186 (0%)
Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
S++ K KF I K K +D +R G+Y +I+ +++IL+ +P +
Sbjct: 35 SSDIKDKIKFYTISI-KLKPSFIDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCY 93
Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
R + + ++ D + + + RG + + A + +KA+
Sbjct: 94 NNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHE 153
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+ ++ R + K ++++++D + +KL ENK+ Y G I Y+ A
Sbjct: 154 DSRDSEAYENRAFTYYNLKKYSSSIKDYTNALKLTPENKNIYLNRGTIYYKIKNYENAIS 213
Query: 539 AHLKAI 544
++KA+
Sbjct: 214 DYMKAL 219
>gi|373849290|ref|ZP_09592091.1| Tetratricopeptide TPR_2 repeat-containing protein [Opitutaceae
bacterium TAV5]
gi|372475455|gb|EHP35464.1| Tetratricopeptide TPR_2 repeat-containing protein [Opitutaceae
bacterium TAV5]
Length = 706
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 34/247 (13%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G +A AI+ +D+ LK P + RG + + +AA+ DF+ I P+ EAW
Sbjct: 49 KGNHADAIAAYDRALKLLPEEADVWYARGESHLALVKPDAALGDFSHVITLRPAMAEAWA 108
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RGQA A+ + EA +D ++ALE +P A I +RG ++ + +AA+ D + L
Sbjct: 109 ARGQAYLAMAKPDEAFRDFTQALELDPKQAGIREQRGRISLDRGELDAALADFDGALALS 168
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
GLAL+ +G + + +++ A+
Sbjct: 169 P---------GLALAHLGR-------------------------ARVFHARGDTQGAIAA 194
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+ + D + A+ R +L + +A +D+ S L + P + RA + A G
Sbjct: 195 YSEAIAADPLLADAFRGRTAMLLEEKRFGEAARDIDSALVLAPRDASLWLARARVWRATG 254
Query: 634 EYREAVI 640
A++
Sbjct: 255 FPENALV 261
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
P I RG A LE A++ + EA++++P +A K G L EA + LS
Sbjct: 477 PVVQINRGEALHRLGRLEEAVTAYQEALRTDPGLADARKDLGLLLMELNRLDEADEQLSD 536
Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
A + P S D + RG+V D+ AA++ + D + K +Y +L L L+
Sbjct: 537 AGKLAPGSGDAPNLRGLVCLISADYPAAIDRFQEAID-DYKTKQSYVHLSLYLA 589
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 103/270 (38%), Gaps = 44/270 (16%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A + K A F Q L+ DP RG + EL+AA++DF A+ +
Sbjct: 109 ARGQAYLAMAKPDEAFRDFTQALELDPKQAGIREQRGRISLDRGELDAALADFDGALALS 168
Query: 446 PSAGEAWKRRGQARA--ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
P G A G+AR A G++ AI S+A+ +P AD R + + K F A
Sbjct: 169 P--GLALAHLGRARVFHARGDTQGAIAAYSEAIAADPLLADAFRGRTAMLLEEKRFGEAA 226
Query: 504 EDL-SACV---------------------------------KLDKENKSAYTYLGLALSS 529
D+ SA V +L N +A LAL
Sbjct: 227 RDIDSALVLAPRDASLWLARARVWRATGFPENALVDIARSLELSPRNTAALVEQALALED 286
Query: 530 IGEYKKAEEAHLKAIQ---LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
G+ A +L A++ D NF AW + Y L + L + + ++
Sbjct: 287 TGDTAAALR-NLDAVRKAAPDENF--AWLQTARIYGKLRRVAEIPPLLTPFIEAHPQDAE 343
Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
A RG L + A+ D + L I+P
Sbjct: 344 ALSTRGSAWLDLDRLDSAVADFRAALAINP 373
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 92/239 (38%), Gaps = 20/239 (8%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG + + K +A+ F ++ P EA RG A + + A DFT+A
Sbjct: 71 DVWYARGESHLALVKPDAALGDFSHVITLRPAMAEAWAARGQAYLAMAKPDEAFRDFTQA 130
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNF 494
++ +P ++RG+ GE A+ D AL P A + H RG
Sbjct: 131 LELDPKQAGIREQRGRISLDRGELDAALADFDGALALSPGLALAHLGRARVFHARG---- 186
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAY---TYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
D A+ S + D A+ T + L GE + ++ L D +
Sbjct: 187 ---DTQGAIAAYSEAIAADPLLADAFRGRTAMLLEEKRFGEAARDIDSALVLAPRDASL- 242
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
W + ++ E AL + + L + R + A + L L G A+++L +
Sbjct: 243 --WLARARVWRATGFPENALVDIARSLELSPRNTAALVEQALALEDTGDTAAALRNLDA 299
>gi|329961280|ref|ZP_08299446.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
gi|328531945|gb|EGF58762.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
Length = 686
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 116/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E RG A+ + + A SD AIQ NP A++ RG
Sbjct: 38 YVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDYQGAESDCDAAIQRNPFVVGAYQIRG 97
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + AI+D A++++P + + H + + + KD++AA EDL + +
Sbjct: 98 LARIRQNKFDGAIEDYKTAIKYDPENVVLWHNLSLCHMQKKDYDAAKEDLGKLLTIAPRY 157
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--------------------- 555
AY G + +A + KAI +DR + WG
Sbjct: 158 TRAYLMRGEVSLQQKDTAQALQDFDKAIAMDRYDPDGWGARAVVRIQQGKYKEAEADLDQ 217
Query: 556 --HLT-------------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
HL+ +F+Q+ N A+ L ID ++ RGLL +G
Sbjct: 218 SIHLSVRNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGD 275
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D L I+P N+ + R G+YR A+
Sbjct: 276 DNRAIEDFDFVLKIEPDNMMAAFNRGILRAQTGDYRGAI 314
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R + ++ +GKY A + DQ + I R AR Q L A+SD+ A+ +
Sbjct: 197 ARAVVRIQQGKYKEAEADLDQSIHLSVRNAGNYINRALARFHQNNLRGAMSDYDLALDID 256
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D L+ EP++ RGI+ + D+ A+ D
Sbjct: 257 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKIEPDNMMAAFNRGILRAQTGDYRGAISD 316
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
S + + Y + A IG+ K AE+ K +++
Sbjct: 317 YSKVIDEYPNFMAGYYHRAEARKKIGDRKGAEQDEFKIMKM 357
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 112/289 (38%), Gaps = 40/289 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++N Y A S D ++ +P A RG AR Q + + AI D+ AI+ +P
Sbjct: 62 RGLAKINLDDYQGAESDCDAAIQRNPFVVGAYQIRGLARIRQNKFDGAIEDYKTAIKYDP 121
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
W + A +DL K L P RG V+ + KD A++D
Sbjct: 122 ENVVLWHNLSLCHMQKKDYDAAKEDLGKLLTIAPRYTRAYLMRGEVSLQQKDTAQALQDF 181
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAE-----EAHLK------------------- 542
+ +D+ + + + G+YK+AE HL
Sbjct: 182 DKAIAMDRYDPDGWGARAVVRIQQGKYKEAEADLDQSIHLSVRNAGNYINRALARFHQNN 241
Query: 543 ----------AIQLD-RNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYH 589
A+ +D NFL GH + + + +A+E VL I+ A
Sbjct: 242 LRGAMSDYDLALDIDPNNFL---GHYNRGLLRAQVGDDNRAIEDFDFVLKIEPDNMMAAF 298
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
RG+L G ++ AI D S + P+ + Y RA IG+ + A
Sbjct: 299 NRGILRAQTGDYRGAISDYSKVIDEYPNFMAGYYHRAEARKKIGDRKGA 347
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + + A A+ FD+ + D P+ R R Q + + A +D ++I
Sbjct: 162 LMRGEVSLQQKDTAQALQDFDKAIAMDRYDPDGWGARAVVRIQQGKYKEAEADLDQSIHL 221
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + R AR A+ D AL+ +PN+ + RG++ + D N A+E
Sbjct: 222 SVRNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIE 281
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
D +K++ +N A G+ + G+Y+ A + K I NF+ + H
Sbjct: 282 DFDFVLKIEPDNMMAAFNRGILRAQTGDYRGAISDYSKVIDEYPNFMAGYYH 333
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D +++ P + RG + ++ AA++D+ +A++ +P EA+ RG LG
Sbjct: 595 LDHVIQLAPDFVYGYYNRGNVLSMLKDYRAALADYNKALELSPDFAEAYFNRGLTHIFLG 654
Query: 464 ESVEAIQDLSKALEF 478
+ + I DLSKA E
Sbjct: 655 NNKQGIADLSKAGEL 669
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF ++
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKI 289
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG RA G+ AI D SK ++ PN + R K D A +
Sbjct: 290 EPDNMMAAFNRGILRAQTGDYRGAISDYSKVIDEYPNFMAGYYHRAEARKKIGDRKGAEQ 349
Query: 505 DLSACVKL--DKEN 516
D +K+ DK N
Sbjct: 350 DEFKIMKMQIDKRN 363
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 31/167 (18%)
Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
+P A RG+ + +DF ++++D + + LD AY L EY+KAE
Sbjct: 505 DPQDAKKRFMRGLDFYLVQDFASSIDDFTQSILLDGTFFPAYFMRALVRYKQLEYQKAEA 564
Query: 539 AHLKA-----------------------------IQLDRNFLEAWGHLTQFYQDLANSEK 569
A + IQL +F+ + + L +
Sbjct: 565 AMSEGATSGAAAEIKKPESQAMDYEIVKNDLDHVIQLAPDFVYGYYNRGNVLSMLKDYRA 624
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
AL + L + F++AY RGL LG +K+ I DLS LGI
Sbjct: 625 ALADYNKALELSPDFAEAYFNRGLTHIFLGNNKQGIADLSKAGELGI 671
>gi|282899388|ref|ZP_06307356.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281195755|gb|EFA70684.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 508
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF +RGI ++++ Y ++ FDQ +K DP Y EA RG A ++ R E A+ DF +
Sbjct: 289 DF-YARGITKLDQLNYKESLDDFDQAIKIDPKYAEAYFKRGYALSWLRRYEEALLDFNQV 347
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I +P+ + + RG L A++D ++A+ P+ + +G+ K + A
Sbjct: 348 IALDPNYVDGYLNRGWTYIWLQNDQAALEDFNRAIRLNPSYSIAYAHQGMAYIKLGKYQA 407
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+E ++LD N YT + + +Y + + AI +D + A+ + Y
Sbjct: 408 ALESSKQAIRLDPNNSYGYTIQSDVFNYLKDYAASIKVSTLAIIIDPDDFNAYINRATAY 467
Query: 562 QDLANSEKALECLQQVLYI-DKRFSK 586
N AL Q+ I ++R++K
Sbjct: 468 TLTGNFSAALVDYQKSAEIFERRYTK 493
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
RG + Q + ++ DF +AI+ +P EA+ +RG A + L EA+ D ++ + +P
Sbjct: 293 RGITKLDQLNYKESLDDFDQAIKIDPKYAEAYFKRGYALSWLRRYEEALLDFNQVIALDP 352
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N D RG ++ AA+ED + ++L+ AY + G+A +G+Y+ A E+
Sbjct: 353 NYVDGYLNRGWTYIWLQNDQAALEDFNRAIRLNPSYSIAYAHQGMAYIKLGKYQAALESS 412
Query: 541 LKAIQLDRNFLEAWGHLTQ-----FYQDLANSEKALECLQQVL-------YIDKRFSKAY 588
+AI+LD N ++G+ Q + +D A S K + L ++ YI++ + AY
Sbjct: 413 KQAIRLDPN--NSYGYTIQSDVFNYLKDYAASIK-VSTLAIIIDPDDFNAYINR--ATAY 467
Query: 589 HLRGLLLHGLGQHKKA 604
L G L ++K+
Sbjct: 468 TLTGNFSAALVDYQKS 483
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 81/160 (50%)
Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
P SA + RGI ++ +++D +K+D + AY G ALS + Y++A
Sbjct: 284 PQSARDFYARGITKLDQLNYKESLDDFDQAIKIDPKYAEAYFKRGYALSWLRRYEEALLD 343
Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
+ I LD N+++ + + Y L N + ALE + + ++ +S AY +G+ LG
Sbjct: 344 FNQVIALDPNYVDGYLNRGWTYIWLQNDQAALEDFNRAIRLNPSYSIAYAHQGMAYIKLG 403
Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+++ A++ + +DP+N +++ ++ + +Y ++
Sbjct: 404 KYQAALESSKQAIRLDPNNSYGYTIQSDVFNYLKDYAASI 443
>gi|224023750|ref|ZP_03642116.1| hypothetical protein BACCOPRO_00466, partial [Bacteroides
coprophilus DSM 18228]
gi|224016972|gb|EEF74984.1| hypothetical protein BACCOPRO_00466 [Bacteroides coprophilus DSM
18228]
Length = 486
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 117/270 (43%), Gaps = 4/270 (1%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++ +K D RG+A++N Y A + L+ +P A RG +R Q+
Sbjct: 50 QVINAKPYLADPYFYRGLAKMNLDDYPGAERDCSEALERNPFVVNAYQVRGISRIRQKNY 109
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
+ AI D+ A++ +P W R + A +L + P D R
Sbjct: 110 KGAIEDYQRALKLDPENISLWHNLVLCRMQEKDYTTAQAELDTIIRISPRYTDAYLMRVE 169
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ K KD A+ D +++D+ N ++ G+ +YK AE +AI+L
Sbjct: 170 NSLKLKDTLQAMNDADRAIEMDRYNPDTWSSRGMLFMMRSKYKDAESDLTEAIRLSLRNA 229
Query: 552 EAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
A+ + L ++YQ+ N A+ L ID+ ++ RGLL +G +AI+D
Sbjct: 230 GAYINRALARYYQN--NLRGAMSDYDLALDIDRNNFIGHYNRGLLRAQVGDDNRAIEDFD 287
Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAV 639
L ++P N+ ++ R G++R A+
Sbjct: 288 FVLSVEPDNMMAVFNRGLLRDKTGDFRGAI 317
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
SRG+ + KY A S + ++ A I R AR +Q L A+SD+ A+ +
Sbjct: 200 SRGMLFMMRSKYKDAESDLTEAIRLSLRNAGAYINRALARYYQNNLRGAMSDYDLALDID 259
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ RG RA +G+ AI+D L EP++ + RG++ K DF A+ D
Sbjct: 260 RNNFIGHYNRGLLRAQVGDDNRAIEDFDFVLSVEPDNMMAVFNRGLLRDKTGDFRGAISD 319
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLD 547
S + + + Y Y A G+ K AEE K + QLD
Sbjct: 320 YSTVLAEYPDFLAGYQYRSQARRKTGDLKGAEEDEFKVLKAQLD 363
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 6/255 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RGI+++ + Y AI + + LK DP R +++ A ++ I+ +P
Sbjct: 99 RGISRIRQKNYKGAIEDYQRALKLDPENISLWHNLVLCRMQEKDYTTAQAELDTIIRISP 158
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A+ R + L ++++A+ D +A+E + + D RG++ + A DL
Sbjct: 159 RYTDAYLMRVENSLKLKDTLQAMNDADRAIEMDRYNPDTWSSRGMLFMMRSKYKDAESDL 218
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN-FLEAWGHLTQ--FYQD 563
+ ++L N AY LA + A + A+ +DRN F+ GH +
Sbjct: 219 TEAIRLSLRNAGAYINRALARYYQNNLRGAMSDYDLALDIDRNNFI---GHYNRGLLRAQ 275
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ + +A+E VL ++ A RGLL G + AI D S+ L P +
Sbjct: 276 VGDDNRAIEDFDFVLSVEPDNMMAVFNRGLLRDKTGDFRGAISDYSTVLAEYPDFLAGYQ 335
Query: 624 LRASCYHAIGEYREA 638
R+ G+ + A
Sbjct: 336 YRSQARRKTGDLKGA 350
>gi|434387380|ref|YP_007097991.1| TPR repeat-containing protein [Chamaesiphon minutus PCC 6605]
gi|428018370|gb|AFY94464.1| TPR repeat-containing protein [Chamaesiphon minutus PCC 6605]
Length = 539
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 122/265 (46%), Gaps = 1/265 (0%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S VD ++ + + ++G Y ++ +Q + D + RG A+ + +A I
Sbjct: 242 TRSKPVDDLVASALQKESKGDYRGMLADLNQAIFLDSQNAQLYYNRGVAKTLLKNRDA-I 300
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
DF AI N + + + RG ++ LG+ AIQD ++A+ + +A H RG
Sbjct: 301 EDFNRAIALNLNDSDVYNNRGYIKSDLGDKKGAIQDFNRAISIDATNARAYHNRGNAKAA 360
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ +A+ED + + LD AY + +G+ K +AI + N++EA
Sbjct: 361 LNNPKSALEDFNRAISLDDTLAPAYLNRSTVKAILGDTKGKLADLERAIAIAPNYIEAHE 420
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+L +L +S+ A+E + + ++ + + Y RG+ + K AI+D + +D
Sbjct: 421 NLGMAKSELGDSKGAIESFNRAIALNPKNANNYSSRGIARSKVADDKGAIEDFDRAIALD 480
Query: 616 PSNIECLYLRASCYHAIGEYREAVI 640
+ + R +G+ + A++
Sbjct: 481 ANQAKAYTNRGLLKAKLGDKKAALL 505
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 90/191 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG + + G AI F++ + D A RG A+A ++A+ DF AI +
Sbjct: 319 NRGYIKSDLGDKKGAIQDFNRAISIDATNARAYHNRGNAKAALNNPKSALEDFNRAISLD 378
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
+ A+ R +A LG++ + DL +A+ PN + G+ + D A+E
Sbjct: 379 DTLAPAYLNRSTVKAILGDTKGKLADLERAIAIAPNYIEAHENLGMAKSELGDSKGAIES 438
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ + L+ +N + Y+ G+A S + + K A E +AI LD N +A+ + L
Sbjct: 439 FNRAIALNPKNANNYSSRGIARSKVADDKGAIEDFDRAIALDANQAKAYTNRGLLKAKLG 498
Query: 566 NSEKALECLQQ 576
+ + AL L++
Sbjct: 499 DKKAALLDLKK 509
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 317 SLNDSNT-NSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK 375
+LNDS+ N+ Y KS + D K + +R+ + T+ A N+ ++
Sbjct: 310 NLNDSDVYNNRGYIKSDLGDKKGAIQDFNRAI------SIDATNARAYHNRGNAKAALNN 363
Query: 376 SKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
KS DF L+R + G ++ ++ + P Y EA G
Sbjct: 364 PKSALEDFNRAISLDDTLAPAYLNRSTVKAILGDTKGKLADLERAIAIAPNYIEAHENLG 423
Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
A++ + + AI F AI NP + RG AR+ + + AI+D +A+ + N
Sbjct: 424 MAKSELGDSKGAIESFNRAIALNPKNANNYSSRGIARSKVADDKGAIEDFDRAIALDANQ 483
Query: 483 ADILHERGIVNFKFKDFNAAVEDL 506
A RG++ K D AA+ DL
Sbjct: 484 AKAYTNRGLLKAKLGDKKAALLDL 507
>gi|423306041|ref|ZP_17284040.1| hypothetical protein HMPREF1072_02980 [Bacteroides uniformis
CL03T00C23]
gi|423309414|ref|ZP_17287404.1| hypothetical protein HMPREF1073_02154 [Bacteroides uniformis
CL03T12C37]
gi|392679598|gb|EIY72978.1| hypothetical protein HMPREF1072_02980 [Bacteroides uniformis
CL03T00C23]
gi|392685093|gb|EIY78412.1| hypothetical protein HMPREF1073_02154 [Bacteroides uniformis
CL03T12C37]
Length = 686
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E RG A+ + + A SD AIQ NP A++ RG
Sbjct: 38 YVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDYQGAESDCDAAIQRNPFVVGAYQIRG 97
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + EAI+D A++++P + + H + + + +D+ AA EDL + +
Sbjct: 98 LARIRQNKFDEAIEDYKTAIKYDPENVVLWHNLSLCHIQKEDYEAAKEDLGTLLTIAPRY 157
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--------------------- 555
AY G + +A KAI +DR + WG
Sbjct: 158 TRAYLMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQ 217
Query: 556 --HLT-------------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
HL+ +F+Q+ N A+ L ID ++ RGLL +G
Sbjct: 218 SIHLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGD 275
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D L ++P N+ + R G+YR A+
Sbjct: 276 DNRAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAI 314
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I ++ +GKY A + DQ + I R AR Q L A+SD+ A+ +
Sbjct: 197 ARAIVRLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D L+ EP++ RG++ + D+ A+ D
Sbjct: 257 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISD 316
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
S + + Y A IG++K AE+ K +++
Sbjct: 317 YSKVIAEYPNFMAGYYQRAEARKKIGDHKGAEQDEFKIMKM 357
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 113/289 (39%), Gaps = 40/289 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++N Y A S D ++ +P A RG AR Q + + AI D+ AI+ +P
Sbjct: 62 RGLAKINLDDYQGAESDCDAAIQRNPFVVGAYQIRGLARIRQNKFDEAIEDYKTAIKYDP 121
Query: 447 SAGEAWKR----------------------------------RGQARAALGESVEAIQDL 472
W RG+ ++++A++D
Sbjct: 122 ENVVLWHNLSLCHIQKEDYEAAKEDLGTLLTIAPRYTRAYLMRGEVSLKQNDTIQALRDF 181
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
KA++ + D R IV + + A DL + L +N Y LA
Sbjct: 182 DKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNN 241
Query: 533 YKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+ A + A+ +D NFL GH + + + +A+E VL ++ A
Sbjct: 242 LRGAMSDYDLALDIDPNNFL---GHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMATF 298
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
RGLL G ++ AI D S + P+ + Y RA IG+++ A
Sbjct: 299 NRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGYYQRAEARKKIGDHKGA 347
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + + A+ FD+ + D P+ R R Q + + A +D ++I
Sbjct: 162 LMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQSIHL 221
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + R AR A+ D AL+ +PN+ + RG++ + D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIE 281
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D +K++ +N A GL + G+Y+ A + K I NF+ +
Sbjct: 282 DFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGY 331
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G AI FD +LK +P A RG RA + AISD+++ I
Sbjct: 265 NRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEY 324
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
P+ + +R +AR +G+ A QD K ++ +
Sbjct: 325 PNFMAGYYQRAEARKKIGDHKGAEQDEFKIMKMQ 358
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D ++ P + RG + ++ AA++D+ +AI+ +P EA+ RG LG
Sbjct: 595 LDHVILLAPDFVYGYYNRGNVSSLLKDYRAALADYDKAIELSPDFAEAYFNRGLTHIFLG 654
Query: 464 ESVEAIQDLSKALEF 478
+ + I DLSKA E
Sbjct: 655 NNKQGIADLSKAGEL 669
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF ++
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKM 289
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG RA G+ AI D SK + PN ++R K D A +
Sbjct: 290 EPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGYYQRAEARKKIGDHKGAEQ 349
Query: 505 DLSACVKL--DKEN 516
D +K+ DK N
Sbjct: 350 DEFKIMKMQIDKRN 363
>gi|423224738|ref|ZP_17211206.1| hypothetical protein HMPREF1062_03392 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392634694|gb|EIY28609.1| hypothetical protein HMPREF1062_03392 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 678
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 114/279 (40%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E RG A+ + + A +D AIQ NP A++ RG
Sbjct: 38 YVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDFQGAEADCNAAIQRNPFVVGAYQIRG 97
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR AI+D AL+++P + + H + + + +D+ AA EDL +K+
Sbjct: 98 LARIRQNNYDGAIEDYKTALKYDPENLVLWHNLSLCHMQKEDYGAAKEDLGKLLKIAPRY 157
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--------------------- 555
AY G + +A KAI++DR + WG
Sbjct: 158 TRAYLMRGEVSLKQKDTIQALNDFEKAIEMDRYDPDGWGARAIVRLQQGKYADAEADLDH 217
Query: 556 --HLT-------------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
HL+ +F+Q+ N A+ L ID ++ RGLL +G
Sbjct: 218 SIHLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGD 275
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D L I+P N+ + R G YR A+
Sbjct: 276 DNRAIEDFDFVLQIEPDNMMATFNRGLLRAQTGNYRGAI 314
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I ++ +GKYA A + D + I R AR Q L A+SD+ A+ +
Sbjct: 197 ARAIVRLQQGKYADAEADLDHSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D L+ EP++ RG++ + ++ A+ D
Sbjct: 257 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLQIEPDNMMATFNRGLLRAQTGNYRGAISD 316
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
S + + Y + A IG+ K AE+ K +++
Sbjct: 317 YSRVIDEYPNFMAGYYHRAEARKKIGDRKGAEQDEFKLMKM 357
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 115/276 (41%), Gaps = 13/276 (4%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI---GRGTAR 425
C I ++ + +++ RG+A++ + Y AI + LK DP E L+
Sbjct: 79 CNAAIQRNPFVVGAYQI-RGLARIRQNNYDGAIEDYKTALKYDP---ENLVLWHNLSLCH 134
Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
+ + AA D + ++ P A+ RG+ ++++A+ D KA+E + D
Sbjct: 135 MQKEDYGAAKEDLGKLLKIAPRYTRAYLMRGEVSLKQKDTIQALNDFEKAIEMDRYDPDG 194
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
R IV + + A DL + L +N Y LA + A + A+
Sbjct: 195 WGARAIVRLQQGKYADAEADLDHSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALD 254
Query: 546 LD-RNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
+D NFL GH + + + +A+E VL I+ A RGLL G ++
Sbjct: 255 IDPNNFL---GHYNRGLLRAQVGDDNRAIEDFDFVLQIEPDNMMATFNRGLLRAQTGNYR 311
Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
AI D S + P+ + Y RA IG+ + A
Sbjct: 312 GAISDYSRVIDEYPNFMAGYYHRAEARKKIGDRKGA 347
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 33/158 (20%)
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK------ 542
RG+ + +DF ++++D + + LD + AY L EYKKAE A L
Sbjct: 507 RGLDFYLVQDFASSIDDFTQAILLDDKFFPAYFMRALVRYKQLEYKKAE-AELTEGVPGA 565
Query: 543 ------------------------AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
IQL +F+ + + L + ALE + +
Sbjct: 566 SSDSKKQPEVTSIDYDIVKNDLDHVIQLAPDFVYGYYNRANVLSMLKDYRGALEDYNKAI 625
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
++K F++AY RGL LG +K+ I DLS LGI
Sbjct: 626 ELNKDFAEAYFNRGLTHIFLGNNKQGITDLSKAGELGI 663
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 57/137 (41%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF +Q
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLQI 289
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG RA G AI D S+ ++ PN + R K D A +
Sbjct: 290 EPDNMMATFNRGLLRAQTGNYRGAISDYSRVIDEYPNFMAGYYHRAEARKKIGDRKGAEQ 349
Query: 505 DLSACVKLDKENKSAYT 521
D +K+ + ++ T
Sbjct: 350 DEFKLMKMQIDKRNGVT 366
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D +++ P + R + ++ A+ D+ +AI+ N EA+ RG LG
Sbjct: 587 LDHVIQLAPDFVYGYYNRANVLSMLKDYRGALEDYNKAIELNKDFAEAYFNRGLTHIFLG 646
Query: 464 ESVEAIQDLSKALEF 478
+ + I DLSKA E
Sbjct: 647 NNKQGITDLSKAGEL 661
>gi|293372831|ref|ZP_06619209.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
gi|292632206|gb|EFF50806.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
Length = 652
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E R A+ + + A +D AIQ NP A++ RG
Sbjct: 14 YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 73
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + AI+D KAL ++P + + H + + + KD+NAA EDL + +K+
Sbjct: 74 LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYNAAKEDLESLLKVSPRY 133
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--------------------- 555
AY G + A KA++LD+ +AW
Sbjct: 134 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNR 193
Query: 556 ---------------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
L +F+Q+ N A+ L ID ++ RGLL +G
Sbjct: 194 AIPLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGD 251
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D + ++P N+ ++ R G+YR A+
Sbjct: 252 DNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAI 290
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I ++ + KYA A + F++ + I R AR Q L A+SD+ A+ +
Sbjct: 173 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 232
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D ++ EP++ + RG++ + D+ A++D
Sbjct: 233 PNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 292
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
+ + + Y A IG+ K AE+ K + Q+D+
Sbjct: 293 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDK 337
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + + +A++ F++ L+ D P+A R + Q + A +DF AI
Sbjct: 138 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNRAIPL 197
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + R AR A+ D AL+ +PN+ + RG++ + D N A+E
Sbjct: 198 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIE 257
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D +K++ +N A GL + G+Y+ A + + I NFL +
Sbjct: 258 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 307
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G AI FD ++K +P A+ RG RA + AI D+T I
Sbjct: 241 NRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 300
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
P+ + +R +AR +G+ A QD EF+ A I + G+ N
Sbjct: 301 PNFLAGYYQRSEARRKIGDKKGAEQD-----EFKVMKAQIDKQNGVTN 343
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D+++ P + A R A ++ AAI D+ +AI+ NP +A+ RG LG
Sbjct: 561 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIIDYDKAIELNPDFADAYFNRGLTHIFLG 620
Query: 464 ESVEAIQDLSKALEF 478
+ I DLSKA E
Sbjct: 621 NNKLGISDLSKAGEL 635
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF I+
Sbjct: 206 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKM 265
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG RA G+ AIQD + + PN ++R K D A +
Sbjct: 266 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 325
Query: 505 DLSACVK--LDKEN 516
D +K +DK+N
Sbjct: 326 DEFKVMKAQIDKQN 339
>gi|404366637|ref|ZP_10972019.1| hypothetical protein FUAG_01830 [Fusobacterium ulcerans ATCC 49185]
gi|313689480|gb|EFS26315.1| hypothetical protein FUAG_01830 [Fusobacterium ulcerans ATCC 49185]
Length = 559
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I + E I+ NP+ + RG L + EA+ D +KA+E +PN+A + RG N
Sbjct: 12 IEELNEKIRLNPNNANFYNSRGNCNYFLKKYEEAVIDYNKAIELDPNNAVYYNLRGNCNH 71
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K + A+ D + ++LD N + Y G S+ +Y+ A + KAI+++ N +
Sbjct: 72 FLKKYKEAIIDYNKAIELDPNNATYYNNRGKTKYSLEDYENAIIDYNKAIEVNPNEEIYY 131
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
+ +L N ++AL+ + + ++ + Y+ RG + + L +KKAIKD L +
Sbjct: 132 IYCGICNYNLKNYKEALKNFENAIQLNPNNATYYNNRGKIKYFLEDYKKAIKDYDKALEL 191
Query: 615 DPSNIECLYLRASCYHAIGEYREAVI 640
+P RA + + Y++A+I
Sbjct: 192 NPYAAITYKNRAESKYMLENYKDALI 217
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 88/176 (50%)
Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
++++ I++L++ + PN+A+ + RG N+ K + AV D + ++LD N Y
Sbjct: 7 DTLKEIEELNEKIRLNPNNANFYNSRGNCNYFLKKYEEAVIDYNKAIELDPNNAVYYNLR 66
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G + +YK+A + KAI+LD N + + + L + E A+ + + ++
Sbjct: 67 GNCNHFLKKYKEAIIDYNKAIELDPNNATYYNNRGKTKYSLEDYENAIIDYNKAIEVNPN 126
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y G+ + L +K+A+K+ + + ++P+N R + + +Y++A+
Sbjct: 127 EEIYYIYCGICNYNLKNYKEALKNFENAIQLNPNNATYYNNRGKIKYFLEDYKKAI 182
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 5/153 (3%)
Query: 366 KKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
KK+ I +K+I +D + +RG + + Y +AI +++ ++ +P I
Sbjct: 74 KKYKEAIIDYNKAIELDPNNATYYNNRGKTKYSLEDYENAIIDYNKAIEVNPNEEIYYIY 133
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
G + + A+ +F AIQ NP+ + RG+ + L + +AI+D KALE P
Sbjct: 134 CGICNYNLKNYKEALKNFENAIQLNPNNATYYNNRGKIKYFLEDYKKAIKDYDKALELNP 193
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+A R + +++ A+ D++ ++L+
Sbjct: 194 YAAITYKNRAESKYMLENYKDALIDINKAIELN 226
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%)
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
K +E L + + ++ + Y+ RG + L ++++A+ D + + +DP+N LR +C
Sbjct: 10 KEIEELNEKIRLNPNNANFYNSRGNCNYFLKKYEEAVIDYNKAIELDPNNAVYYNLRGNC 69
Query: 629 YHAIGEYREAVI 640
H + +Y+EA+I
Sbjct: 70 NHFLKKYKEAII 81
>gi|237722138|ref|ZP_04552619.1| tetratricopeptide repeat family protein [Bacteroides sp. 2_2_4]
gi|229447948|gb|EEO53739.1| tetratricopeptide repeat family protein [Bacteroides sp. 2_2_4]
Length = 676
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E R A+ + + A +D AIQ NP A++ RG
Sbjct: 38 YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 97
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + AI+D KAL ++P + + H + + + KD+NAA EDL + +K+
Sbjct: 98 LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYNAAKEDLESLLKVSPRY 157
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--------------------- 555
AY G + A KA++LD+ +AW
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNR 217
Query: 556 ---------------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
L +F+Q+ N A+ L ID ++ RGLL +G
Sbjct: 218 AIPLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGD 275
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D + ++P N+ ++ R G+YR A+
Sbjct: 276 DNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAI 314
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I ++ + KYA A + F++ + I R AR Q L A+SD+ A+ +
Sbjct: 197 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D ++ EP++ + RG++ + D+ A++D
Sbjct: 257 PNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 316
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
+ + + Y A IG+ K E+ K + Q+D+
Sbjct: 317 YTTVINQYPNFLAGYYQRSEARRKIGDKKGVEQDEFKVMKAQIDK 361
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + + +A++ F++ L+ D P+A R + Q + A +DF AI
Sbjct: 162 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNRAIPL 221
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + R AR A+ D AL+ +PN+ + RG++ + D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIE 281
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D +K++ +N A GL + G+Y+ A + + I NFL +
Sbjct: 282 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 331
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G AI FD ++K +P A+ RG RA + AI D+T I
Sbjct: 265 NRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 324
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
P+ + +R +AR +G+ QD EF+ A I + G+ N
Sbjct: 325 PNFLAGYYQRSEARRKIGDKKGVEQD-----EFKVMKAQIDKQNGVTN 367
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D+++ P + A R A ++ AAI D+ +AI+ NP +A+ RG LG
Sbjct: 585 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIIDYDKAIELNPDFADAYFNRGLTHIFLG 644
Query: 464 ESVEAIQDLSKALEF 478
+ I DLSKA E
Sbjct: 645 NNKLGISDLSKAGEL 659
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF I+
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKM 289
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG RA G+ AIQD + + PN ++R K D +
Sbjct: 290 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGVEQ 349
Query: 505 DLSACVK--LDKEN 516
D +K +DK+N
Sbjct: 350 DEFKVMKAQIDKQN 363
>gi|383123017|ref|ZP_09943703.1| hypothetical protein BSIG_0243 [Bacteroides sp. 1_1_6]
gi|251841890|gb|EES69970.1| hypothetical protein BSIG_0243 [Bacteroides sp. 1_1_6]
Length = 683
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 46/283 (16%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E R A+ + + A +D EAI+ NP A++ RG
Sbjct: 38 YVLSIQYFNQVINAKPYLYEPYFFRALAKVNLEDYQGAEADCDEAIKRNPFVVGAYQVRG 97
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + AI+D KAL ++P + + H + + + KD++AA EDL + +K+
Sbjct: 98 LARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSPRY 157
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLK----AIQLDRNFLEAWG----------------- 555
AY G + +K A LK A++LD+ +AW
Sbjct: 158 TRAYLMRG----EVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQSNYAEAES 213
Query: 556 ------HLT-------------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
HL+ +F+Q+ N A+ L ID ++ RGLL
Sbjct: 214 DLDRAIHLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFIGHYNRGLLRA 271
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+G +AI+D + ++P N+ ++ RA G+YR A+
Sbjct: 272 RVGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAI 314
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 6/251 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++ + K+ AI + + L DP + +++ +AA D ++ +P
Sbjct: 96 RGLARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSP 155
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG+ ++V A++D + ALE + D R IV + ++ A DL
Sbjct: 156 RYTRAYLMRGEVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQSNYAEAESDL 215
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
+ L +N Y LA + A + A+ +D NF+ GH +
Sbjct: 216 DRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFI---GHYNRGLLRAR 272
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ + +A+E V+ ++ A R LL G ++ AIKD ++ + P+ + Y
Sbjct: 273 VGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKDYTTVIDQYPNFLAGYY 332
Query: 624 LRASCYHAIGE 634
RA IG+
Sbjct: 333 HRAEARKKIGD 343
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I ++ + YA A S D+ + I R AR Q L A+SD+ A+ +
Sbjct: 197 ARAIVRLQQSNYAEAESDLDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D ++ EP++ + R ++ + D+ A++D
Sbjct: 257 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKD 316
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
+ + + Y + A IG+ K AE+ K + QLD+
Sbjct: 317 YTTVIDQYPNFLAGYYHRAEARKKIGDKKGAEQDDFKLLKAQLDK 361
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D+++ P + A R A ++ AAI D+ +AIQ +P +A+ RG LG
Sbjct: 592 LDKVITLAPDFVYAYYNRANVAAMLKDYRAAIVDYDKAIQLSPDFADAYFNRGLTHIFLG 651
Query: 464 ESVEAIQDLSKALEFEPNSA 483
+ I DLSKA E SA
Sbjct: 652 NNKAGISDLSKAGELGVVSA 671
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF IQ
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQM 289
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A R RA G+ AI+D + ++ PN + R K D A +
Sbjct: 290 EPDNMMAIFNRALLRAQTGDYRGAIKDYTTVIDQYPNFLAGYYHRAEARKKIGDKKGAEQ 349
Query: 505 DLSACVK--LDKEN 516
D +K LDK+N
Sbjct: 350 DDFKLLKAQLDKQN 363
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 27/153 (17%)
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL------- 541
R I + +DF++AV DL+ + LD + AY L EY+KAE+A
Sbjct: 516 RAIDFYLVQDFSSAVADLTQAILLDGDFFPAYFMRALIRCKQLEYQKAEQAAEADMPSGA 575
Query: 542 ------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
K I L +F+ A+ + L + A+ + + +
Sbjct: 576 AVKEVSAVDYEVVRKDLDKVITLAPDFVYAYYNRANVAAMLKDYRAAIVDYDKAIQLSPD 635
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
F+ AY RGL LG +K I DLS LG+
Sbjct: 636 FADAYFNRGLTHIFLGNNKAGISDLSKAGELGV 668
>gi|29345831|ref|NP_809334.1| hypothetical protein BT_0421 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29337724|gb|AAO75528.1| tetratricopeptide repeat (TPR) family protein [Bacteroides
thetaiotaomicron VPI-5482]
Length = 683
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 46/283 (16%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E R A+ + + A +D EAI+ NP A++ RG
Sbjct: 38 YVLSIQYFNQVINAKPYLYEPYFFRALAKVNLEDYQGAEADCDEAIKRNPFVVGAYQVRG 97
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + AI+D KAL ++P + + H + + + KD++AA EDL + +K+
Sbjct: 98 LARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSPRY 157
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLK----AIQLDRNFLEAWG----------------- 555
AY G + +K A LK A++LD+ +AW
Sbjct: 158 TRAYLMRG----EVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQSNYAEAES 213
Query: 556 ------HLT-------------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
HL+ +F+Q+ N A+ L ID ++ RGLL
Sbjct: 214 DLDRAIHLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFIGHYNRGLLRA 271
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+G +AI+D + ++P N+ ++ RA G+YR A+
Sbjct: 272 RVGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAI 314
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 6/251 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++ + K+ AI + + L DP + +++ +AA D ++ +P
Sbjct: 96 RGLARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSP 155
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG+ ++V A++D + ALE + D R IV + ++ A DL
Sbjct: 156 RYTRAYLMRGEVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQSNYAEAESDL 215
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
+ L +N Y LA + A + A+ +D NF+ GH +
Sbjct: 216 DRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFI---GHYNRGLLRAR 272
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ + +A+E V+ ++ A R LL G ++ AIKD ++ + P+ + Y
Sbjct: 273 VGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKDYTTVINQYPNFLAGYY 332
Query: 624 LRASCYHAIGE 634
RA IG+
Sbjct: 333 HRAEARKKIGD 343
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I ++ + YA A S D+ + I R AR Q L A+SD+ A+ +
Sbjct: 197 ARAIVRLQQSNYAEAESDLDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D ++ EP++ + R ++ + D+ A++D
Sbjct: 257 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKD 316
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
+ + + Y + A IG+ K AE+ K + QLD+
Sbjct: 317 YTTVINQYPNFLAGYYHRAEARKKIGDKKGAEQDDFKLLKAQLDK 361
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D+++ P + A R A ++ AAI D+ +AIQ +P +A+ RG LG
Sbjct: 592 LDKVITLAPDFVYAYYNRANVAAMLKDYRAAIVDYDKAIQLSPDFADAYFNRGLTHIFLG 651
Query: 464 ESVEAIQDLSKALEFEPNSA 483
+ I DLSKA E SA
Sbjct: 652 NNKAGISDLSKAGELGVVSA 671
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF IQ
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQM 289
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A R RA G+ AI+D + + PN + R K D A +
Sbjct: 290 EPDNMMAIFNRALLRAQTGDYRGAIKDYTTVINQYPNFLAGYYHRAEARKKIGDKKGAEQ 349
Query: 505 DLSACVK--LDKEN 516
D +K LDK+N
Sbjct: 350 DDFKLLKAQLDKQN 363
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 27/153 (17%)
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL------- 541
R I + +DF++AV DL+ + LD + AY L EY+KAE+A
Sbjct: 516 RAIDFYLVQDFSSAVADLTQAILLDGDFFPAYFMRALIRCKQLEYQKAEQAAEADMPSGA 575
Query: 542 ------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
K I L +F+ A+ + L + A+ + + +
Sbjct: 576 AVKEVSAVDYEVVRKDLDKVITLAPDFVYAYYNRANVAAMLKDYRAAIVDYDKAIQLSPD 635
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
F+ AY RGL LG +K I DLS LG+
Sbjct: 636 FADAYFNRGLTHIFLGNNKAGISDLSKAGELGV 668
>gi|113475260|ref|YP_721321.1| hypothetical protein Tery_1568 [Trichodesmium erythraeum IMS101]
gi|110166308|gb|ABG50848.1| protein of unknown function DUF323 [Trichodesmium erythraeum
IMS101]
Length = 820
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 95/193 (49%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
E+ +G QR+ + AI++F +AI+ NP EA+ RG G+ A+ D ++A
Sbjct: 318 ESYFNQGLKYRNQRKYDLAIAEFNQAIKLNPKYAEAYYNRGNVYNTQGKYDLALVDYNQA 377
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++F P + + +GI+ K ++ A+ + + +KL+ + Y G+ ++ +Y
Sbjct: 378 IKFNPKYTQVYNNKGIIYNKQGKYDLALAEFNQAIKLNPKYSKVYNNRGIVYNNQRKYDL 437
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A +AI+L+ + EA+ + Y + + AL Q + +++KAY+ RGL+
Sbjct: 438 AIAEFNQAIKLNPKYAEAYYNRGNIYNNQGKYDLALAEFNQAIKFKPKYAKAYYNRGLVY 497
Query: 596 HGLGQHKKAIKDL 608
++ I D
Sbjct: 498 KTQRNIERVISDF 510
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 94/187 (50%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++G+ N+ KY AI+ F+Q +K +P Y EA RG Q + + A+ D+ +AI+
Sbjct: 321 FNQGLKYRNQRKYDLAIAEFNQAIKLNPKYAEAYYNRGNVYNTQGKYDLALVDYNQAIKF 380
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP + + +G G+ A+ + ++A++ P + + + RGIV + ++ A+
Sbjct: 381 NPKYTQVYNNKGIIYNKQGKYDLALAEFNQAIKLNPKYSKVYNNRGIVYNNQRKYDLAIA 440
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + +KL+ + AY G ++ G+Y A +AI+ + +A+ + Y+
Sbjct: 441 EFNQAIKLNPKYAEAYYNRGNIYNNQGKYDLALAEFNQAIKFKPKYAKAYYNRGLVYKTQ 500
Query: 565 ANSEKAL 571
N E+ +
Sbjct: 501 RNIERVI 507
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 69/139 (49%)
Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
+ ++ A+ + + +KL+ + AY G ++ G+Y A + +AI+ + + + + +
Sbjct: 331 RKYDLAIAEFNQAIKLNPKYAEAYYNRGNVYNTQGKYDLALVDYNQAIKFNPKYTQVYNN 390
Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
Y + AL Q + ++ ++SK Y+ RG++ + ++ AI + + + ++P
Sbjct: 391 KGIIYNKQGKYDLALAEFNQAIKLNPKYSKVYNNRGIVYNNQRKYDLAIAEFNQAIKLNP 450
Query: 617 SNIECLYLRASCYHAIGEY 635
E Y R + Y+ G+Y
Sbjct: 451 KYAEAYYNRGNIYNNQGKY 469
>gi|427724340|ref|YP_007071617.1| hypothetical protein Lepto7376_2509 [Leptolyngbya sp. PCC 7376]
gi|427356060|gb|AFY38783.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 925
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 101/224 (45%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
EA +G AI+ + +A++ NP+ + W RG A + LG+ EAI KA
Sbjct: 77 EAWFNQGYQFHIAGRFIEAIASYDKALEINPNDQDIWNNRGSALSTLGKKDEAITSYDKA 136
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
LE P+ D + RG A+ ++++ + A+ G ALS +G ++
Sbjct: 137 LEINPDDQDTWNNRGSTLSDLGRKEEAITSYDKSLEINPNHYQAWRNRGSALSDLGRKEE 196
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A + KA++++ N+ EAWG E+A+ + I + + + RG L
Sbjct: 197 AIISFDKALEINPNYHEAWGARGNALLACERYEEAITSFDKAFDISPNYDETPYGRGYAL 256
Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
LG+H++AI L I+P++ + + + ++ E +
Sbjct: 257 EKLGKHEEAIISFDKALEINPNHYQAWNGKGRALVELAQFSEGI 300
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%)
Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
EAW +G G +EAI KALE PN DI + RG + A+
Sbjct: 76 AEAWFNQGYQFHIAGRFIEAIASYDKALEINPNDQDIWNNRGSALSTLGKKDEAITSYDK 135
Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
++++ +++ + G LS +G ++A ++ K+++++ N +AW + DL E
Sbjct: 136 ALEINPDDQDTWNNRGSTLSDLGRKEEAITSYDKSLEINPNHYQAWRNRGSALSDLGRKE 195
Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
+A+ + L I+ + +A+ RG L ++++AI I P+ E Y R
Sbjct: 196 EAIISFDKALEINPNYHEAWGARGNALLACERYEEAITSFDKAFDISPNYDETPYGRGYA 255
Query: 629 YHAIGEYREAVI 640
+G++ EA+I
Sbjct: 256 LEKLGKHEEAII 267
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D +RG A GK AI+ +D+ L+ +P + RG+ + E AI+ + ++
Sbjct: 111 DIWNNRGSALSTLGKKDEAITSYDKALEINPDDQDTWNNRGSTLSDLGRKEEAITSYDKS 170
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
++ NP+ +AW+ RG A + LG EAI KALE PN + RG + +
Sbjct: 171 LEINPNHYQAWRNRGSALSDLGRKEEAIISFDKALEINPNYHEAWGARGNALLACERYEE 230
Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
A+ + G AL +G++++A + KA++++ N +AW +
Sbjct: 231 AITSFDKAFDISPNYDETPYGRGYALEKLGKHEEAIISFDKALEINPNHYQAWNGKGRAL 290
Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
+LA + ++ + L I + +G L+ + K AI + +GL
Sbjct: 291 VELAQFSEGIDSYNKSLEIMPSSWPTWGNKGSALYLIHGEKAAILNWQTGL 341
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 54 KAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCA 112
+AI D L + + QD N R S L + I DK+L+++P QA+ +G A
Sbjct: 128 EAITSYDKALEINPDDQDTWNNRGSTLSDLGRKEEAITSYDKSLEINPNHYQAWRNRGSA 187
Query: 113 FSALGRKEEALSVWEKGYE 131
S LGRKEEA+ ++K E
Sbjct: 188 LSDLGRKEEAIISFDKALE 206
>gi|239906686|ref|YP_002953427.1| hypothetical protein DMR_20500 [Desulfovibrio magneticus RS-1]
gi|239796552|dbj|BAH75541.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 402
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 4/262 (1%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL--IGRGTARAFQRELEAAISDF 438
VD S+G +Y +++ F P P+ IGR +A + A++ F
Sbjct: 38 VDALFSKGFVLRKLNRYEDSLAAFTTASVITPNDPDIWYYIGRNLVKA--NRPKDALAAF 95
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
++ P + W + A +G EA+ K+LE +P+ ++RG+V F +
Sbjct: 96 DTGLRLTPQDNDFWYGKADALVKMGHFNEALTYFDKSLELKPDDDRSWNDRGLVLFHLQR 155
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
+ A+ + LD+E + GL LS++G + A +AH KA LD ++ AW
Sbjct: 156 YEEALASCEMAILLDEEYPMYWNNKGLTLSALGNFSSALDAHEKATNLDADYAAAWHAKG 215
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
L ++AL + ID + + +G L L + +A++ L ++PS+
Sbjct: 216 VALYKLDRFDEALTAYDVAINIDPDVAITWTKKGDALKQLDRDDEALQAYEIALNLNPSD 275
Query: 619 IECLYLRASCYHAIGEYREAVI 640
Y + G+Y EA++
Sbjct: 276 AGAWYSKGVILGTHGQYDEALL 297
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 101/269 (37%), Gaps = 34/269 (12%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
DF + A V G + A++ FD+ L+ P + RG + E A++ A
Sbjct: 107 DFWYGKADALVKMGHFNEALTYFDKSLELKPDDDRSWNDRGLVLFHLQRYEEALASCEMA 166
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I + W +G +ALG A+ KA + + A H +G+ +K F+
Sbjct: 167 ILLDEEYPMYWNNKGLTLSALGNFSSALDAHEKATNLDADYAAAWHAKGVALYKLDRFDE 226
Query: 502 AVEDLSACVKLDKE----------------------------------NKSAYTYLGLAL 527
A+ + +D + + A+ G+ L
Sbjct: 227 ALTAYDVAINIDPDVAITWTKKGDALKQLDRDDEALQAYEIALNLNPSDAGAWYSKGVIL 286
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+ G+Y +A A KA+Q++ AW + L E+AL L L +D A
Sbjct: 287 GTHGQYDEALLALEKALQINSKSPHAWNNFGAALNSLNRPEEALAALDMALSLDPELIPA 346
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
H R L LG+ +A+ +S L + P
Sbjct: 347 QHNRAGALKQLGRLDEALAVCNSVLELFP 375
>gi|428212897|ref|YP_007086041.1| hypothetical protein Oscil6304_2502 [Oscillatoria acuminata PCC 6304]
gi|428001278|gb|AFY82121.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
Length = 1150
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 11/225 (4%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+A+ G +A AIS + + L+ + RG AR Q + AI D+TE+I
Sbjct: 932 NRGLAKFQIGDFAGAISDYTRSLELNDNEAVVYFNRGFARFNQGDYTGAIGDYTESILKA 991
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A+ RG+A LG +A +D S+A++ P A + RG+ + D+ A+ D
Sbjct: 992 PEQTGAYFYRGEAYGRLGNYQQAAEDYSRAIQLNPQDAVAYNNRGLARYNQADYPGAIAD 1051
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ ++L ++ AY G+A S+ +Y A E +A+ L+ + A+ + + ++
Sbjct: 1052 YTEALRLKPDDAVAYLNRGVARSAGTDYHGAIEDFTQALSLNEKYASAYNYRGRARAEMG 1111
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ + A+ LQ + R H H++AI L++
Sbjct: 1112 DRQGAIGDLQTAANLFSRQGDTIH-----------HQQAIAALTA 1145
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
+P A RG R + E A+ D+T A+Q + + A+ RG A+ +G+ AI
Sbjct: 889 NPANASAYYNRGFERLDIGDYEGAVDDYTRALQIDGNQPTAYNNRGLAKFQIGDFAGAIS 948
Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
D +++LE N A + RG F D+ A+ D + + E AY Y G A +
Sbjct: 949 DYTRSLELNDNEAVVYFNRGFARFNQGDYTGAIGDYTESILKAPEQTGAYFYRGEAYGRL 1008
Query: 531 GEYKKAEEAHLKAIQLDRNFLEAW--------------GHLTQFYQDL------------ 564
G Y++A E + +AIQL+ A+ G + + + L
Sbjct: 1009 GNYQQAAEDYSRAIQLNPQDAVAYNNRGLARYNQADYPGAIADYTEALRLKPDDAVAYLN 1068
Query: 565 --------ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ A+E Q L ++++++ AY+ RG +G + AI DL +
Sbjct: 1069 RGVARSAGTDYHGAIEDFTQALSLNEKYASAYNYRGRARAEMGDRQGAIGDLQT 1122
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 35/170 (20%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I+ S+ L P +A + RG D+ AV+D + +++D +AY GLA
Sbjct: 880 IERFSEPL-LNPANASAYYNRGFERLDIGDYEGAVDDYTRALQIDGNQPTAYNNRGLAKF 938
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
IG++ A + ++++L+ N + V+Y ++ F++
Sbjct: 939 QIGDFAGAISDYTRSLELNDN-------------------------EAVVYFNRGFARFN 973
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
G + AI D + + P + R Y +G Y++A
Sbjct: 974 Q---------GDYTGAIGDYTESILKAPEQTGAYFYRGEAYGRLGNYQQA 1014
>gi|380695034|ref|ZP_09859893.1| hypothetical protein BfaeM_13887 [Bacteroides faecis MAJ27]
Length = 672
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 46/283 (16%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E R A+ + + A +D EAI+ NP A++ RG
Sbjct: 29 YVLSIQYFNQVINAKPYLYEPYFFRALAKVNLEDYQGAEADCNEAIKRNPFVVGAYQVRG 88
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + AI+D KAL ++P + + H + + + KD++AA EDL + +K+
Sbjct: 89 LARIRQNKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSPRY 148
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLK----AIQLDRNFLEAWG----------------- 555
AY G + +K A LK A++LD+ +AW
Sbjct: 149 TRAYLMRG----EVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQANYAEAEA 204
Query: 556 ------HLT-------------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
HL+ +F+Q+ N A+ L ID ++ RGLL
Sbjct: 205 DLDRAIHLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFIGHYNRGLLRA 262
Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+G +AI+D + ++P N+ ++ RA G+YR A+
Sbjct: 263 RVGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAI 305
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 6/251 (2%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++ + K+ AI + + L DP + +++ +AA D ++ +P
Sbjct: 87 RGLARIRQNKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSP 146
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ RG+ ++V A++D + ALE + D R IV + ++ A DL
Sbjct: 147 RYTRAYLMRGEVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQANYAEAEADL 206
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
+ L +N Y LA + A + A+ +D NF+ GH +
Sbjct: 207 DRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFI---GHYNRGLLRAR 263
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
+ + +A+E V+ ++ A R LL G ++ AIKD ++ + P+ + Y
Sbjct: 264 VGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKDYTTVIDQYPNFLAGYY 323
Query: 624 LRASCYHAIGE 634
RA IG+
Sbjct: 324 HRAEARKKIGD 334
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I ++ + YA A + D+ + I R AR Q L A+SD+ A+ +
Sbjct: 188 ARAIVRLQQANYAEAEADLDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 247
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D ++ EP++ + R ++ + D+ A++D
Sbjct: 248 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKD 307
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
+ + + Y + A IG+ K AE+ K + QLD+
Sbjct: 308 YTTVIDQYPNFLAGYYHRAEARKKIGDKKGAEQDDFKLLKAQLDK 352
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D+++ P + A R A ++ AAI D+ +AIQ P +A+ RG LG
Sbjct: 581 LDKVITLAPDFVYAYYNRANVAAMLKDYRAAIVDYDKAIQLAPDFADAYFNRGLTHIFLG 640
Query: 464 ESVEAIQDLSKALEF 478
+ I DLSKA E
Sbjct: 641 NNKAGISDLSKAGEL 655
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF IQ
Sbjct: 221 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQM 280
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A R RA G+ AI+D + ++ PN + R K D A +
Sbjct: 281 EPDNMMAIFNRALLRAQTGDYRGAIKDYTTVIDQYPNFLAGYYHRAEARKKIGDKKGAEQ 340
Query: 505 DLSACVK--LDKENKSA 519
D +K LDK+N A
Sbjct: 341 DDFKLLKAQLDKQNGVA 357
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 63/153 (41%), Gaps = 27/153 (17%)
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE---EAHL---- 541
R I + +DF++AV DL+ + LD + AY L EY+KAE EA L
Sbjct: 505 RAIDFYLVQDFSSAVADLTQAILLDGDFFPAYFMRSLIRCKQLEYQKAEQAAEADLPSGG 564
Query: 542 ------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
K I L +F+ A+ + L + A+ + + +
Sbjct: 565 AAKEVSAVDYEVVRKDLDKVITLAPDFVYAYYNRANVAAMLKDYRAAIVDYDKAIQLAPD 624
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
F+ AY RGL LG +K I DLS LG+
Sbjct: 625 FADAYFNRGLTHIFLGNNKAGISDLSKAGELGV 657
>gi|418056728|ref|ZP_12694780.1| Tetratricopeptide TPR_1 repeat-containing protein [Hyphomicrobium
denitrificans 1NES1]
gi|353209345|gb|EHB74750.1| Tetratricopeptide TPR_1 repeat-containing protein [Hyphomicrobium
denitrificans 1NES1]
Length = 575
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 105/243 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
R +A G+ A+ +++ ++ P YP A RG +L+ A+ DF A+ P
Sbjct: 73 RAVASARLGQTKLALEDYNRAVELFPEYPVAYNNRGNLLVAVGQLDEAMKDFDRALVLAP 132
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
A+ R A LG+ AI+D +K++E P SA L RG+ +AA+ D
Sbjct: 133 GYAAAYSNRANAEMRLGKPDVAIRDFTKSIELMPASAPPLSGRGLAYLATDKPHAAIRDF 192
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
S V D SAY A +IG+ +A E +A+ D N E + Y N
Sbjct: 193 SRAVSADARFASAYRNRAEARMTIGQRDEAIEDLSRAVAFDVNNTELYVVRGYAYLLNGN 252
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
+ AL+ + +D + S A+ RGL A DL+ + +DP + RA
Sbjct: 253 TASALKDFSHAIELDGKSSAAFEGRGLANSLAEAPDDAYADLNRAIELDPRSPVAYAFRA 312
Query: 627 SCY 629
Y
Sbjct: 313 VVY 315
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 2/233 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R A++ GK AI F + ++ P L GRG A + AAI DF+ A+ ++
Sbjct: 140 NRANAEMRLGKPDVAIRDFTKSIELMPASAPPLSGRGLAYLATDKPHAAIRDFSRAVSAD 199
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
A++ R +AR +G+ EAI+DLS+A+ F+ N+ ++ RG + +A++D
Sbjct: 200 ARFASAYRNRAEARMTIGQRDEAIEDLSRAVAFDVNNTELYVVRGYAYLLNGNTASALKD 259
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL-KAIQLDRNFLEAWGHLTQFYQDL 564
S ++LD ++ +A+ GLA +S+ E A L +AI+LD A+ Y+
Sbjct: 260 FSHAIELDGKSSAAFEGRGLA-NSLAEAPDDAYADLNRAIELDPRSPVAYAFRAVVYKQN 318
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
+ ++ + +D +A RG + G AI DL L + PS
Sbjct: 319 NQPDIGARDVETAIKLDPNSPEALWARGEIAEASGHADTAIADLRHVLQLKPS 371
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 108/261 (41%), Gaps = 14/261 (5%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG V G+ A+ FD+ L P Y A R A + + AI DFT++I+
Sbjct: 106 NRGNLLVAVGQLDEAMKDFDRALVLAPGYAAAYSNRANAEMRLGKPDVAIRDFTKSIELM 165
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P++ RG A A + AI+D S+A+ + A R + A+ED
Sbjct: 166 PASAPPLSGRGLAYLATDKPHAAIRDFSRAVSADARFASAYRNRAEARMTIGQRDEAIED 225
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ--D 563
LS V D N Y G A G A + AI+LD G + ++
Sbjct: 226 LSRAVAFDVNNTELYVVRGYAYLLNGNTASALKDFSHAIELD-------GKSSAAFEGRG 278
Query: 564 LANS-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
LANS + A L + + +D R AY R ++ Q +D+ + + +DP++
Sbjct: 279 LANSLAEAPDDAYADLNRAIELDPRSPVAYAFRAVVYKQNNQPDIGARDVETAIKLDPNS 338
Query: 619 IECLYLRASCYHAIGEYREAV 639
E L+ R A G A+
Sbjct: 339 PEALWARGEIAEASGHADTAI 359
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 89/230 (38%), Gaps = 54/230 (23%)
Query: 444 SNPSA---GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
PSA G A RG A+ EA++D A + A IL++R + + +
Sbjct: 28 PQPSAAEQGAAEMVRGDVATAVAAYTEALRDTGLAND---RRATILNDRAVASARLGQTK 84
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ED + V+L E AY G L ++G+ +A + DR + A G+
Sbjct: 85 LALEDYNRAVELFPEYPVAYNNRGNLLVAVGQLDEAMK------DFDRALVLAPGYAAA- 137
Query: 561 YQDLANSE--------------KALECLQ---------------------------QVLY 579
Y + AN+E K++E + + +
Sbjct: 138 YSNRANAEMRLGKPDVAIRDFTKSIELMPASAPPLSGRGLAYLATDKPHAAIRDFSRAVS 197
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
D RF+ AY R +GQ +AI+DLS + D +N E +R Y
Sbjct: 198 ADARFASAYRNRAEARMTIGQRDEAIEDLSRAVAFDVNNTELYVVRGYAY 247
>gi|170747494|ref|YP_001753754.1| hypothetical protein Mrad2831_1062 [Methylobacterium radiotolerans
JCM 2831]
gi|170654016|gb|ACB23071.1| TPR repeat-containing protein [Methylobacterium radiotolerans JCM
2831]
Length = 290
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 4/220 (1%)
Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
I+ ++++ +P A RG A A + AI+DFT+AIQ +P++ A+ R A
Sbjct: 54 IASLTEVVQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAIQLDPNSASAYNNRALANR 113
Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
+G A+QD SKA+ +PN R V + + A+ DL+ ++L E+ AY
Sbjct: 114 QIGRDGPALQDFSKAIGIDPNYGPAYIGRANVERAQGNLDQALNDLNVAIRLSPESAQAY 173
Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE--KALECLQQVL 578
GL G+ +A AI DR+ A + + +A ++ KA+E L
Sbjct: 174 HARGLVKQKQGQDTQAIADFDAAI--DRDPFVAAPYAARGQSLIATNQYAKAIEDYNAAL 231
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++ + + ++ RGL GQ K+A+++ IDP+N
Sbjct: 232 NVNAKDATSWAYRGLAYEKQGQRKEAMENYQRASTIDPNN 271
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
+RG A G++ AI+ F + ++ DP A R A R R+ A+ DF++AI
Sbjct: 73 TRGAAYARAGQFNDAIADFTKAIQLDPNSASAYNNRALANRQIGRD-GPALQDFSKAIGI 131
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P+ G A+ R A G +A+ DL+ A+ P SA H RG+V K A+
Sbjct: 132 DPNYGPAYIGRANVERAQGNLDQALNDLNVAIRLSPESAQAYHARGLVKQKQGQDTQAIA 191
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
D A + D + Y G +L + +Y KA E + A+ ++ +W + Y+
Sbjct: 192 DFDAAIDRDPFVAAPYAARGQSLIATNQYAKAIEDYNAALNVNAKDATSWAYRGLAYEKQ 251
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
++A+E Q+ ID + A G + G+G
Sbjct: 252 GQRKEAMENYQRASTIDPNNTVARAGLGRVQGGVG 286
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%)
Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
I L++ ++ PN A + RG + FN A+ D + ++LD + SAY LA
Sbjct: 54 IASLTEVVQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAIQLDPNSASAYNNRALANR 113
Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
IG A + KAI +D N+ A+ + N ++AL L + + ++AY
Sbjct: 114 QIGRDGPALQDFSKAIGIDPNYGPAYIGRANVERAQGNLDQALNDLNVAIRLSPESAQAY 173
Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
H RGL+ GQ +AI D + + DP R A +Y +A+
Sbjct: 174 HARGLVKQKQGQDTQAIADFDAAIDRDPFVAAPYAARGQSLIATNQYAKAI 224
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%)
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
N + L+ V+ + + +AY G A + G++ A KAIQLD N A+ +
Sbjct: 51 NVNIASLTEVVQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAIQLDPNSASAYNNRAL 110
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
+ + AL+ + + ID + AY R + G +A+ DL+ + + P +
Sbjct: 111 ANRQIGRDGPALQDFSKAIGIDPNYGPAYIGRANVERAQGNLDQALNDLNVAIRLSPESA 170
Query: 620 ECLYLRASCYHAIGEYREAV 639
+ + R G+ +A+
Sbjct: 171 QAYHARGLVKQKQGQDTQAI 190
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 21/223 (9%)
Query: 322 NTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK------ 375
NT +Y+++ ++ +D T K L S A N+ +I +
Sbjct: 72 NTRGAAYARAGQFNDAIADFT--------KAIQLDPNSASAYNNRALANRQIGRDGPALQ 123
Query: 376 --SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
SK+I +D + R + +G A++ + ++ P +A RG + Q
Sbjct: 124 DFSKAIGIDPNYGPAYIGRANVERAQGNLDQALNDLNVAIRLSPESAQAYHARGLVKQKQ 183
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ AI+DF AI +P + RGQ+ A + +AI+D + AL A
Sbjct: 184 GQDTQAIADFDAAIDRDPFVAAPYAARGQSLIATNQYAKAIEDYNAALNVNAKDATSWAY 243
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
RG+ K A+E+ +D N A LG +G
Sbjct: 244 RGLAYEKQGQRKEAMENYQRASTIDPNNTVARAGLGRVQGGVG 286
>gi|160889626|ref|ZP_02070629.1| hypothetical protein BACUNI_02052 [Bacteroides uniformis ATCC 8492]
gi|317479179|ref|ZP_07938316.1| tetratricopeptide [Bacteroides sp. 4_1_36]
gi|156860618|gb|EDO54049.1| tetratricopeptide repeat protein [Bacteroides uniformis ATCC 8492]
gi|316904667|gb|EFV26484.1| tetratricopeptide [Bacteroides sp. 4_1_36]
Length = 686
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y +I F+Q++ P E RG A+ + + A SD AIQ NP A++ RG
Sbjct: 38 YVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDYQGAESDCDAAIQRNPFVVGAYQIRG 97
Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
AR + EAI+D A++++P + + H + + + +D+ AA EDL + +
Sbjct: 98 LARIRQNKFDEAIEDYKTAIKYDPENVVLWHNLSLCHIQKEDYEAAKEDLGTLLTIAPRY 157
Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--------------------- 555
AY G + +A KAI +DR + WG
Sbjct: 158 TRAYLMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQ 217
Query: 556 --HLT-------------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
HL+ +F+Q+ N A+ L ID ++ RGLL +G
Sbjct: 218 SIHLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGD 275
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+AI+D L ++P N+ + R G+YR A+
Sbjct: 276 DNRAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAI 314
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+R I ++ +GKY A + DQ + I R AR Q L A+SD+ A+ +
Sbjct: 197 ARAIVRLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ RG RA +G+ AI+D L+ EP++ RG++ + D+ A+ D
Sbjct: 257 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISD 316
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
S + + Y A IG++K AE+ K +++
Sbjct: 317 YSKVIAEYPNFMAGYYQRAEARKKIGDHKGAEQDEFKIMKM 357
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 113/289 (39%), Gaps = 40/289 (13%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++N Y A S D ++ +P A RG AR Q + + AI D+ AI+ +P
Sbjct: 62 RGLAKINLDDYQGAESDCDAAIQRNPFVVGAYQIRGLARIRQNKFDEAIEDYKTAIKYDP 121
Query: 447 SAGEAWKR----------------------------------RGQARAALGESVEAIQDL 472
W RG+ ++++A++D
Sbjct: 122 ENVVLWHNLSLCHIQKEDYEAAKEDLGTLLTIAPRYTRAYLMRGEVSLKQNDTIQALRDF 181
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
KA++ + D R IV + + A DL + L +N Y LA
Sbjct: 182 DKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNN 241
Query: 533 YKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYH 589
+ A + A+ +D NFL GH + + + +A+E VL ++ A
Sbjct: 242 LRGAMSDYDLALDIDPNNFL---GHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMATF 298
Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
RGLL G ++ AI D S + P+ + Y RA IG+++ A
Sbjct: 299 NRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGYYQRAEARKKIGDHKGA 347
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG + + A+ FD+ + D P+ R R Q + + A +D ++I
Sbjct: 162 LMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQSIHL 221
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + R AR A+ D AL+ +PN+ + RG++ + D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIE 281
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
D +K++ +N A GL + G+Y+ A + K I NF+ +
Sbjct: 282 DFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGY 331
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG+ + G AI FD +LK +P A RG RA + AISD+++ I
Sbjct: 265 NRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEY 324
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
P+ + +R +AR +G+ A QD K ++ +
Sbjct: 325 PNFMAGYYQRAEARKKIGDHKGAEQDEFKIMKMQ 358
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
D ++ P + RG + ++ AA++D+ +AI+ +P EA+ RG LG
Sbjct: 595 LDHVILLAPDFVYGYYNRGNVSSLLKDYRAALADYDKAIELSPDFAEAYFNRGLTHIFLG 654
Query: 464 ESVEAIQDLSKALEF 478
+ + I DLSKA E
Sbjct: 655 NNKQGIADLSKAGEL 669
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
++R +A+ ++ A+S +D L DP RG RA + AI DF ++
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKM 289
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
P A RG RA G+ AI D SK + PN ++R K D A +
Sbjct: 290 EPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGYYQRAEARKKIGDHKGAEQ 349
Query: 505 DLSACVKL--DKEN 516
D +K+ DK N
Sbjct: 350 DEFKIMKMQIDKRN 363
>gi|445062842|ref|ZP_21375152.1| hypothetical protein H263_05452, partial [Brachyspira hampsonii
30599]
gi|444505776|gb|ELV06228.1| hypothetical protein H263_05452, partial [Brachyspira hampsonii
30599]
Length = 184
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G ++ G Y AI+ ++ L+ Y +A RGTA + AI DF +AI +P
Sbjct: 32 GACKIGLGLYNEAIADINKALEIYDEYTDAYNNRGTAEYNLGLYKEAIKDFNKAIALSPQ 91
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ RG A++ALG +A++D + A+ EP D + R I N AV+D
Sbjct: 92 YFYAYNNRGNAKSALGLYEDALEDFTNAINIEPQYIDAYYNRAIAKNNIGLHNEAVKDYD 151
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKK 535
++LD N +AY GL+ S+G+Y+K
Sbjct: 152 VVIELDNNNINAYYNRGLSYYSLGDYEK 179
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 35/205 (17%)
Query: 432 EAAISDFTEAIQ-SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
E AIS + + I+ SN ++ A+ G + LG EAI D++KALE D + RG
Sbjct: 7 EEAISYYNKVIELSNSNSSYAYNNIGACKIGLGLYNEAIADINKALEIYDEYTDAYNNRG 66
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + A++D + + L + AY G A S++G Y
Sbjct: 67 TAEYNLGLYKEAIKDFNKAIALSPQYFYAYNNRGNAKSALGLY----------------- 109
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
E ALE + I+ ++ AY+ R + + +G H +A+KD
Sbjct: 110 -----------------EDALEDFTNAINIEPQYIDAYYNRAIAKNNIGLHNEAVKDYDV 152
Query: 611 GLGIDPSNIECLYLRASCYHAIGEY 635
+ +D +NI Y R Y+++G+Y
Sbjct: 153 VIELDNNNINAYYNRGLSYYSLGDY 177
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+ N G Y AI F++ + P Y A RG A++ E A+ DFT AI
Sbjct: 64 NRGTAEYNLGLYKEAIKDFNKAIALSPQYFYAYNNRGNAKSALGLYEDALEDFTNAINIE 123
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
P +A+ R A+ +G EA++D +E + N+ + + RG+ + D+
Sbjct: 124 PQYIDAYYNRAIAKNNIGLHNEAVKDYDVVIELDNNNINAYYNRGLSYYSLGDY 177
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 502 AVEDLSACVKLDKENKS-AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ + ++L N S AY +G +G Y +A KA+++ + +A+ +
Sbjct: 9 AISYYNKVIELSNSNSSYAYNNIGACKIGLGLYNEAIADINKALEIYDEYTDAYNNRGTA 68
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
+L ++A++ + + + ++ AY+ RG LG ++ A++D ++ + I+P I+
Sbjct: 69 EYNLGLYKEAIKDFNKAIALSPQYFYAYNNRGNAKSALGLYEDALEDFTNAINIEPQYID 128
Query: 621 CLYLRASCYHAIGEYREAV 639
Y RA + IG + EAV
Sbjct: 129 AYYNRAIAKNNIGLHNEAV 147
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW------E 127
NR L L+K I+D +KA+ L P AY +G A SALG E+AL + E
Sbjct: 64 NRGTAEYNLGLYKEAIKDFNKAIALSPQYFYAYNNRGNAKSALGLYEDALEDFTNAINIE 123
Query: 128 KGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
Y A + A K + L A +D V E D +N
Sbjct: 124 PQYIDAYYNRAIAKNNIGLH---NEAVKDYDVVIELDNNN 160
>gi|427716795|ref|YP_007064789.1| hypothetical protein Cal7507_1491 [Calothrix sp. PCC 7507]
gi|427349231|gb|AFY31955.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 726
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 51/243 (20%)
Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
Y AI F Q + ++P + +A + RG AR ++ E A++D+TEA+Q NP +A+ RG
Sbjct: 468 YERAIDNFSQAIAQEPHHAKAHVNRGNARYNLKDYEGALTDYTEALQINPQEVKAFVNRG 527
Query: 457 QARAALG--------ESVEAIQDLSKALEFEPNSADILHERGIVNFKF--------KDFN 500
R L E +AI D + AL + + RG+V + KD+
Sbjct: 528 NVRYVLADFSNDPDKEYNQAISDFNNALRLDNKEIEAYVRRGVVRSQIAKYSGDSQKDYR 587
Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
A+ED + +KL+ AY G+ S I +Y + ++
Sbjct: 588 RAIEDFTQAIKLNASKAEAYFQRGVVYSQIAQYSS-------------------DYTREY 628
Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH---------KKAIKDLSSG 611
Q +A+ AL I+ + +KAY RG++ + L Q+ +AI+DL +
Sbjct: 629 KQAIADFNHALS-------INAKLAKAYLKRGIVRYELAQYGGRESEANRMRAIEDLQAS 681
Query: 612 LGI 614
I
Sbjct: 682 AKI 684
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 92/187 (49%), Gaps = 26/187 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF--------QRELEAAIS 436
++RG A+ N Y A++ + + L+ +P +A + RG R +E AIS
Sbjct: 490 VNRGNARYNLKDYEGALTDYTEALQINPQEVKAFVNRGNVRYVLADFSNDPDKEYNQAIS 549
Query: 437 DFTEAIQSNPSAGEAWKRRGQARAAL----GESVE----AIQDLSKALEFEPNSADILHE 488
DF A++ + EA+ RRG R+ + G+S + AI+D ++A++ + A+ +
Sbjct: 550 DFNNALRLDNKEIEAYVRRGVVRSQIAKYSGDSQKDYRRAIEDFTQAIKLNASKAEAYFQ 609
Query: 489 RGIVNFKF--------KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY--KKAEE 538
RG+V + +++ A+ D + + ++ + AY G+ + +Y +++E
Sbjct: 610 RGVVYSQIAQYSSDYTREYKQAIADFNHALSINAKLAKAYLKRGIVRYELAQYGGRESEA 669
Query: 539 AHLKAIQ 545
++AI+
Sbjct: 670 NRMRAIE 676
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 24/188 (12%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ ++G A + + AI + S+A+ EP+ A RG + KD+ A+ D + ++
Sbjct: 455 YYKQGHAAYKVRDYERAIDNFSQAIAQEPHHAKAHVNRGNARYNLKDYEGALTDYTEALQ 514
Query: 512 LDKENKSAYTYLG---LALSSIG-----EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
++ + A+ G L+ EY +A A++LD +EA+
Sbjct: 515 INPQEVKAFVNRGNVRYVLADFSNDPDKEYNQAISDFNNALRLDNKEIEAYVRRGVVRSQ 574
Query: 564 LA--------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ--------HKKAIKD 607
+A + +A+E Q + ++ ++AY RG++ + Q +K+AI D
Sbjct: 575 IAKYSGDSQKDYRRAIEDFTQAIKLNASKAEAYFQRGVVYSQIAQYSSDYTREYKQAIAD 634
Query: 608 LSSGLGID 615
+ L I+
Sbjct: 635 FNHALSIN 642
>gi|425460628|ref|ZP_18840109.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9808]
gi|389826672|emb|CCI22671.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
aeruginosa PCC 9808]
Length = 317
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 117/241 (48%), Gaps = 5/241 (2%)
Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
++S+ + + + GI Q+ G Y A+ F+Q L+++ A R + + ++ A
Sbjct: 42 AQSVHLSYWMRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTKIYLQDYLHAW 101
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
D T ++Q A+ RG A LG+ +A+ D ++ + +P + RG+V
Sbjct: 102 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYSQALTDYNQTIWLKPTYYQAYYNRGLVQAA 161
Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
K++ A+ D + ++ + + Y GL+ ++ + A+ +A++L++N
Sbjct: 162 MKNYPLALADFNQSLRQITNWQPDTLATIYNDRGLSHLALHNFTSAKADFNQALRLNKNN 221
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
A+ +L L ++++ L Q + ID ++ AY RGLL H LG ++ A+ DL+
Sbjct: 222 ASAYYNLACTAHQLGEYDRSIAHLNQAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 281
Query: 611 G 611
G
Sbjct: 282 G 282
>gi|182680104|ref|YP_001834250.1| hypothetical protein Bind_3201 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635987|gb|ACB96761.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 955
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 7/259 (2%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+ N A+S FD+ L P YPEAL + + A+ F A P+
Sbjct: 93 GLICFNADDPRDALSWFDRALNLKPAYPEALGAKAIILQRLGRPQEALEVFEAAWMLRPT 152
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
E G R +LG+ EA+ +AL P+ + L RG + +F F A+E
Sbjct: 153 DVEILFSIGVVRQSLGQMKEALDAYEQALCLRPDYCEALTNRGALLERFGRFAEALECFE 212
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ ++ +G L +G + A A+ KA ++ E + Q L+
Sbjct: 213 EIARQRNDDSVNLFNMGSVLQKLGRLEDALAAYEKAARIGPPDPETELNRGNVLQKLSRF 272
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
E+A+ C Q L + +A++ +G+ L GLG+ +A+ + LG++PS E R +
Sbjct: 273 EEAIACYDQALLYRAHYPQAFYNKGIALQGLGKPHEALAAYDAALGLEPSYCEAWCNRGN 332
Query: 628 CYH-------AIGEYREAV 639
H A+ YREA+
Sbjct: 333 ILHELKRLPDALLSYREAL 351
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
++GIA GK A++ +D L +P Y EA RG + L A+ + EA++
Sbjct: 295 NKGIALQGLGKPHEALAAYDAALGLEPSYCEAWCNRGNILHELKRLPDALLSYREALKVR 354
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P A R L EA+ ++AL+ +PN A L G + K F+ A+E
Sbjct: 355 PHFLPALTNRANVLLELNRFEEALHSCTEALKHDPNHARALGISGAILHKLSRFHEALEA 414
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
L L+ + G L +G +A A+ KA+ L + EA L ++
Sbjct: 415 LDKAAALNPASPEVALNRGNVLQELGRLPEAIAAYEKALALKNPYPEALSGLGVALKEQG 474
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+AL C Q L + F+ A + R LL G+ ++ D S
Sbjct: 475 RFNEALACFDQALDLKPDFADARNNRAGLLLLYGRFEQGFADYES 519
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 125/335 (37%), Gaps = 24/335 (7%)
Query: 306 DVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRN 365
D D LS +LN E+ +I + E+ W ML+ T
Sbjct: 101 DPRDALSWFDRALNLKPAYPEALGAKAIILQRLGRPQEALEVFEAAW-MLRPTD------ 153
Query: 366 KKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
V+ S G+ + + G+ A+ ++Q L P Y EAL RG
Sbjct: 154 ---------------VEILFSIGVVRQSLGQMKEALDAYEQALCLRPDYCEALTNRGALL 198
Query: 426 AFQRELEAAISDFTE-AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
A+ F E A Q N + + G LG +A+ KA P +
Sbjct: 199 ERFGRFAEALECFEEIARQRNDDSVNLFN-MGSVLQKLGRLEDALAAYEKAARIGPPDPE 257
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
RG V K F A+ + A+ G+AL +G+ +A A+ A+
Sbjct: 258 TELNRGNVLQKLSRFEEAIACYDQALLYRAHYPQAFYNKGIALQGLGKPHEALAAYDAAL 317
Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
L+ ++ EAW + +L AL ++ L + F A R +L L + ++A
Sbjct: 318 GLEPSYCEAWCNRGNILHELKRLPDALLSYREALKVRPHFLPALTNRANVLLELNRFEEA 377
Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + L DP++ L + + H + + EA+
Sbjct: 378 LHSCTEALKHDPNHARALGISGAILHKLSRFHEAL 412
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 106/254 (41%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG G++A A+ F++I ++ L G+ LE A++ + +A +
Sbjct: 193 NRGALLERFGRFAEALECFEEIARQRNDDSVNLFNMGSVLQKLGRLEDALAAYEKAARIG 252
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P E RG L EAI +AL + + + +GI + A+
Sbjct: 253 PPDPETELNRGNVLQKLSRFEEAIACYDQALLYRAHYPQAFYNKGIALQGLGKPHEALAA 312
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A + L+ A+ G L + A ++ +A+++ +FL A + +L
Sbjct: 313 YDAALGLEPSYCEAWCNRGNILHELKRLPDALLSYREALKVRPHFLPALTNRANVLLELN 372
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
E+AL + L D ++A + G +LH L + +A++ L ++P++ E R
Sbjct: 373 RFEEALHSCTEALKHDPNHARALGISGAILHKLSRFHEALEALDKAAALNPASPEVALNR 432
Query: 626 ASCYHAIGEYREAV 639
+ +G EA+
Sbjct: 433 GNVLQELGRLPEAI 446
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 98/245 (40%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ A++ +++ + P PE + RG E AI+ + +A+ +A+
Sbjct: 236 GRLEDALAAYEKAARIGPPDPETELNRGNVLQKLSRFEEAIACYDQALLYRAHYPQAFYN 295
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+G A LG+ EA+ AL EP+ + RG + + K A+ +K+
Sbjct: 296 KGIALQGLGKPHEALAAYDAALGLEPSYCEAWCNRGNILHELKRLPDALLSYREALKVRP 355
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
A T L + +++A + +A++ D N A G L+ +ALE L
Sbjct: 356 HFLPALTNRANVLLELNRFEEALHSCTEALKHDPNHARALGISGAILHKLSRFHEALEAL 415
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ ++ + RG +L LG+ +AI L + E L G
Sbjct: 416 DKAAALNPASPEVALNRGNVLQELGRLPEAIAAYEKALALKNPYPEALSGLGVALKEQGR 475
Query: 635 YREAV 639
+ EA+
Sbjct: 476 FNEAL 480
>gi|124024556|ref|YP_001018863.1| hypothetical protein P9303_28681 [Prochlorococcus marinus str. MIT
9303]
gi|123964842|gb|ABM79598.1| Hypothetical protein P9303_28681 [Prochlorococcus marinus str. MIT
9303]
Length = 539
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 5/251 (1%)
Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
SV+ R A+ + Y AI+ + + ++ P + RG A+ ++ + AI+DF
Sbjct: 291 SVEGYFLRAYAKYDLRDYQEAIADYTKTIEIHPQNTVSYNNRGNAKQKLKDHQGAIADFN 350
Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
+AI +P A+ RG A+ LG+ AI D +KA+ P + RG K KD
Sbjct: 351 KAIAIDPQNHTAYTNRGSAKDDLGDYQGAIADYNKAIAINPQDDAAYNNRGNAKQKLKDH 410
Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
A+ D S + ++ +N +YT G +G+Y+ A KAI++ + A+ +
Sbjct: 411 QGAISDYSKAIAINPQNAISYTNRGNTKDDLGDYQGAIADFNKAIEIKPDSANAYNNRGN 470
Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL--SSGLGIDPS 617
DL + + A+ + + I+ + + ++ RG+ +G K A D +S LG+
Sbjct: 471 AKDDLGDHQGAIADYNKAIEINPQDAVSHANRGIAKELVGDLKGACADWRKASSLGV--- 527
Query: 618 NIECLYLRASC 628
+ ++R C
Sbjct: 528 QVVASWVRKQC 538
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
R A+ R+ + AI+D+T+ I+ +P ++ RG A+ L + AI D +KA+ +P
Sbjct: 298 RAYAKYDLRDYQEAIADYTKTIEIHPQNTVSYNNRGNAKQKLKDHQGAIADFNKAIAIDP 357
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
+ RG D+ A+ D + + ++ ++ +AY G A + +++ A +
Sbjct: 358 QNHTAYTNRGSAKDDLGDYQGAIADYNKAIAINPQDDAAYNNRGNAKQKLKDHQGAISDY 417
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
KAI ++ ++ + DL + + A+ + + I + AY+ RG LG
Sbjct: 418 SKAIAINPQNAISYTNRGNTKDDLGDYQGAIADFNKAIEIKPDSANAYNNRGNAKDDLGD 477
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
H+ AI D + + I+P + R +G+ + A
Sbjct: 478 HQGAIADYNKAIEINPQDAVSHANRGIAKELVGDLKGA 515
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%)
Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
E + R A+ L + EAI D +K +E P + + RG K KD A+ D +
Sbjct: 293 EGYFLRAYAKYDLRDYQEAIADYTKTIEIHPQNTVSYNNRGNAKQKLKDHQGAIADFNKA 352
Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+ +D +N +AYT G A +G+Y+ A + KAI ++ A+ + Q L + +
Sbjct: 353 IAIDPQNHTAYTNRGSAKDDLGDYQGAIADYNKAIAINPQDDAAYNNRGNAKQKLKDHQG 412
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
A+ + + I+ + + +Y RG LG ++ AI D + + I P + R +
Sbjct: 413 AISDYSKAIAINPQNAISYTNRGNTKDDLGDYQGAIADFNKAIEIKPDSANAYNNRGNAK 472
Query: 630 HAIGEYREAV 639
+G+++ A+
Sbjct: 473 DDLGDHQGAI 482
>gi|456062996|ref|YP_007501966.1| TPR repeat-containing protein [beta proteobacterium CB]
gi|455440293|gb|AGG33231.1| TPR repeat-containing protein [beta proteobacterium CB]
Length = 267
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 111/229 (48%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+GK A +++ IL++DP++ A+ G G A + AI F AI + S A+
Sbjct: 27 QGKLQEAWALYQTILRQDPVHYGAIHGMGLIAAQMKSYSMAIDLFNNAIAVDSSNPRAYS 86
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
G A A+ G+ A+++ A++ +P+ D + RG+V + K + +A+ D + ++L
Sbjct: 87 NLGNALASEGKRTLALKNFDIAIKLDPSFIDAIKNRGLVRAELKQYKSALTDFARVLELA 146
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
A+ Y L S+G+ KA A+ + + N +L + + AL
Sbjct: 147 PGYWRAHIYTANVLISMGKLDKALHAYDLGLAANPNSATLCNNLGAILCSMGRFKLALPR 206
Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
L++ + I+ ++++A++ R + L GL + A+K L + P + L
Sbjct: 207 LERAIKINPQYAEAFNNRAVALIGLNRKADALKSYDHALELKPGYQDAL 255
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G A +EGK A+ FD +K DP + +A+ RG RA ++ ++A++DF ++ P
Sbjct: 89 GNALASEGKRTLALKNFDIAIKLDPSFIDAIKNRGLVRAELKQYKSALTDFARVLELAPG 148
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A ++G+ +A+ L PNSA + + G + F A+ L
Sbjct: 149 YWRAHIYTANVLISMGKLDKALHAYDLGLAANPNSATLCNNLGAILCSMGRFKLALPRLE 208
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
+K++ + A+ +AL + A +++ A++L + +A
Sbjct: 209 RAIKINPQYAEAFNNRAVALIGLNRKADALKSYDHALELKPGYQDA 254
>gi|440753799|ref|ZP_20933001.1| kinase domain protein [Microcystis aeruginosa TAIHU98]
gi|440174005|gb|ELP53374.1| kinase domain protein [Microcystis aeruginosa TAIHU98]
Length = 717
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 122/245 (49%), Gaps = 1/245 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 357 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 416
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A L ++ EA++ + L P ++ + + + + ++AA + L + +
Sbjct: 417 RGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQ 476
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ ++ + W L ALE
Sbjct: 477 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 536
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + +FS+A++ +G++L LG++ +A++ + + + + + + H +
Sbjct: 537 SKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLER 596
Query: 635 YREAV 639
++EA+
Sbjct: 597 FQEAI 601
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 7/248 (2%)
Query: 396 KYASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 391 RYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQG 450
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 451 KADIYLELQQYSAAQKALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 510
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
+N + G +L + + A E++ KA Q + F +A H +Q Q L + +ALE
Sbjct: 511 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQA--HYSQGIILQKLGRNSEALE 568
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY-LRASCYHA 631
Q + + +A+ +G LLH L + ++AI I E + +CY
Sbjct: 569 AFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYR- 627
Query: 632 IGEYREAV 639
+G+Y +A+
Sbjct: 628 LGDYSQAI 635
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 83/192 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G + N Y A+ +DQ L + +G + ++ A+ +++A Q NP
Sbjct: 485 KGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNP 544
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A +G LG + EA++ ++A + N +G + + + F A+
Sbjct: 545 QFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASY 604
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + +G A +G+Y +A A+ +AIQ ++ E W L + L
Sbjct: 605 EKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQ 664
Query: 567 SEKALECLQQVL 578
E+A++ Q+ L
Sbjct: 665 YERAIQAYQESL 676
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 105/256 (41%), Gaps = 34/256 (13%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A K A+ F+++L +P +A G+ ++ AA + +
Sbjct: 415 LGRGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 474
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 475 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALE 534
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L +G +A EA +A + + N+ +AW L
Sbjct: 535 SYSKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQL 594
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + +A+ EKA + QQ + K + +
Sbjct: 595 ERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKS 654
Query: 591 RGLLLHGLGQHKKAIK 606
G LGQ+++AI+
Sbjct: 655 LGNSWFKLGQYERAIQ 670
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G L EAI KA +++ G
Sbjct: 566 ALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAC 625
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D++ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 626 YRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSN 681
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 8/193 (4%)
Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
LN N ESYSK+ + + S + S+ + L++ ++ + F T+ +K+
Sbjct: 526 LNKINNALESYSKAGQFNPQFSQAHYSQGII------LQKLGRNSEALEAF--TQATKAN 577
Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
S L++G ++ AI+ +++ + E IG G A + AI+
Sbjct: 578 SNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITA 637
Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
+ +AIQ E WK G + LG+ AIQ ++L + N ++ ++ + +++
Sbjct: 638 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDQEVQTQKQLAETRWQ 697
Query: 498 DFNAAVEDLSACV 510
+ + ++ + V
Sbjct: 698 ELQQSPQNPTPKV 710
>gi|298675989|ref|YP_003727739.1| hypothetical protein Metev_2116 [Methanohalobium evestigatum
Z-7303]
gi|298288977|gb|ADI74943.1| TPR repeat-containing protein [Methanohalobium evestigatum Z-7303]
Length = 461
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 100/198 (50%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+GI Q Y A+ +++ +K +P +G Q E A+ + +++ NP
Sbjct: 240 KGIVQEKLNLYEDALQSYNRAIKLNPESGYFWAKKGYILKIQEHSEKALDSYNNSLELNP 299
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
AW +G G+ EA++ +K+LE PN + + + +G + K + +N A+E
Sbjct: 300 EYDLAWFYKGTILEEFGKYDEALKAYNKSLELNPNKSIVWYNKGFLLTKMQMYNEALEAY 359
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
+ ++L+ E++ T GL + +G+Y KA +A+ KA+ ++ + AW +++ Y L +
Sbjct: 360 NKSLELNPEDEVTLTSKGLIYTYMGQYNKALKAYDKALNINPKYANAWYNMSCVYSLLDD 419
Query: 567 SEKALECLQQVLYIDKRF 584
++ AL L+ + D +
Sbjct: 420 ADSALLYLKFAIEYDSYY 437
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 10/247 (4%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQ 443
+ +GI KY A+ +D+ L+ +P A I +G T +R E A+ F +AI
Sbjct: 170 IEKGILYDGLEKYEKALESYDKALEINPDNETAWINKGHTLNKLER-YEDALKAFNKAIT 228
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AA 502
NP E W +G + L +A+Q ++A++ P S ++G + K ++ + A
Sbjct: 229 INPDNEETWDYKGIVQEKLNLYEDALQSYNRAIKLNPESGYFWAKKGYI-LKIQEHSEKA 287
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
++ + ++L+ E A+ Y G L G+Y +A +A+ K+++L+ N W +
Sbjct: 288 LDSYNNSLELNPEYDLAWFYKGTILEEFGKYDEALKAYNKSLELNPNKSIVWYNKGFLLT 347
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS----- 617
+ +ALE + L ++ +GL+ +GQ+ KA+K L I+P
Sbjct: 348 KMQMYNEALEAYNKSLELNPEDEVTLTSKGLIYTYMGQYNKALKAYDKALNINPKYANAW 407
Query: 618 -NIECLY 623
N+ C+Y
Sbjct: 408 YNMSCVY 414
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 112/255 (43%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +GIA +Y A FD+ K P A +G + + A+ F +A
Sbjct: 102 IGKGIALTALERYEEATEAFDEAAKISPEDSVAWKSKGLSLKNLNHYDLALETFKKASDL 161
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
NP W +G L + +A++ KALE P++ +G K + + A++
Sbjct: 162 NPEDDFIWIEKGILYDGLEKYEKALESYDKALEINPDNETAWINKGHTLNKLERYEDALK 221
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ + ++ +N+ + Y G+ + Y+ A +++ +AI+L+ W +
Sbjct: 222 AFNKAITINPDNEETWDYKGIVQEKLNLYEDALQSYNRAIKLNPESGYFWAKKGYILKIQ 281
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
+SEKAL+ L ++ + A+ +G +L G++ +A+K + L ++P+ Y
Sbjct: 282 EHSEKALDSYNNSLELNPEYDLAWFYKGTILEEFGKYDEALKAYNKSLELNPNKSIVWYN 341
Query: 625 RASCYHAIGEYREAV 639
+ + Y EA+
Sbjct: 342 KGFLLTKMQMYNEAL 356
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 118/254 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
S+G++ N Y A+ F + +P I +G + E A+ + +A++ N
Sbjct: 137 SKGLSLKNLNHYDLALETFKKASDLNPEDDFIWIEKGILYDGLEKYEKALESYDKALEIN 196
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P AW +G L +A++ +KA+ P++ + +GIV K + A++
Sbjct: 197 PDNETAWINKGHTLNKLERYEDALKAFNKAITINPDNEETWDYKGIVQEKLNLYEDALQS 256
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
+ +KL+ E+ + G L +KA +++ +++L+ + AW + ++
Sbjct: 257 YNRAIKLNPESGYFWAKKGYILKIQEHSEKALDSYNNSLELNPEYDLAWFYKGTILEEFG 316
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++AL+ + L ++ S ++ +G LL + + +A++ + L ++P + L +
Sbjct: 317 KYDEALKAYNKSLELNPNKSIVWYNKGFLLTKMQMYNEALEAYNKSLELNPEDEVTLTSK 376
Query: 626 ASCYHAIGEYREAV 639
Y +G+Y +A+
Sbjct: 377 GLIYTYMGQYNKAL 390
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 109/244 (44%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
K+ A+ F +++ P IG+G A E A F EA + +P AWK +
Sbjct: 79 KHEEALEAFSKVVDIKPDDNIGWIGKGIALTALERYEEATEAFDEAAKISPEDSVAWKSK 138
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + L A++ KA + P I E+GI+ + + A+E ++++ +
Sbjct: 139 GLSLKNLNHYDLALETFKKASDLNPEDDFIWIEKGILYDGLEKYEKALESYDKALEINPD 198
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
N++A+ G L+ + Y+ A +A KAI ++ + E W + + L E AL+
Sbjct: 199 NETAWINKGHTLNKLERYEDALKAFNKAITINPDNEETWDYKGIVQEKLNLYEDALQSYN 258
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + ++ + +G +L +KA+ ++ L ++P + + + G+Y
Sbjct: 259 RAIKLNPESGYFWAKKGYILKIQEHSEKALDSYNNSLELNPEYDLAWFYKGTILEEFGKY 318
Query: 636 REAV 639
EA+
Sbjct: 319 DEAL 322
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 88/203 (43%), Gaps = 34/203 (16%)
Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
++L+ G + + A++ F A++ NP AWK +G L + EA++ SK
Sbjct: 31 KSLVKEGELYRYANRHKDALNIFNRALKLNPRDVTAWKNKGFELNTLEKHEEALEAFSKV 90
Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
++ +P+ +++ K G+AL+++ Y++
Sbjct: 91 VDIKPD----------------------DNIGWIGK------------GIALTALERYEE 116
Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
A EA +A ++ AW ++L + + ALE ++ ++ + +G+L
Sbjct: 117 ATEAFDEAAKISPEDSVAWKSKGLSLKNLNHYDLALETFKKASDLNPEDDFIWIEKGILY 176
Query: 596 HGLGQHKKAIKDLSSGLGIDPSN 618
GL +++KA++ L I+P N
Sbjct: 177 DGLEKYEKALESYDKALEINPDN 199
>gi|159026094|emb|CAO86323.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 666
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 122/245 (49%), Gaps = 1/245 (0%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
+Y A++ + Q LK +P Y EAL G+ A + A++ + +AIQ NP SA +AW
Sbjct: 306 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 365
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
RG+A L ++ EA++ + L P ++ + + + + ++AA + L + +
Sbjct: 366 RGKALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQ 425
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
+ + G +L ++ +Y+ A +A+ +A+ ++ + W L ALE
Sbjct: 426 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 485
Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
+ + +FS+A++ +G++L LG++ +A++ + + + + + + H +
Sbjct: 486 SKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLER 545
Query: 635 YREAV 639
++EA+
Sbjct: 546 FQEAI 550
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 7/248 (2%)
Query: 396 KYASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
+Y+ A++ +++ ++ +P +A +GRG A + + A+ F + NP+A +AW+
Sbjct: 340 RYSEALNTYEKAIQINPDSAWQAWLGRGKALDKLDKNQEALESFERVLSLNPAASQAWQG 399
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
+ L + A + L K L F+ N A I +++G +D+ AV+ + ++
Sbjct: 400 KADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 459
Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
+N + G +L + + A E++ KA Q + F +A H +Q Q L + +ALE
Sbjct: 460 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQA--HYSQGIILQKLGRNSEALE 517
Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY-LRASCYHA 631
Q + + +A+ +G LLH L + ++AI I E + +CY
Sbjct: 518 AFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYR- 576
Query: 632 IGEYREAV 639
+G+Y +A+
Sbjct: 577 LGDYSQAI 584
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 83/192 (43%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
+G + N Y A+ +DQ L + +G + ++ A+ +++A Q NP
Sbjct: 434 KGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNP 493
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+A +G LG + EA++ ++A + N +G + + + F A+
Sbjct: 494 QFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASY 553
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
++ + +G A +G+Y +A A+ +AIQ ++ E W L + L
Sbjct: 554 EKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQ 613
Query: 567 SEKALECLQQVL 578
E+A++ Q+ L
Sbjct: 614 YERAIQAYQESL 625
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 34/262 (12%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
L RG A K A+ F+++L +P +A G+ ++ AA + +
Sbjct: 364 LGRGKALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTF 423
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+ + W ++G + L + A++ +AL E ++A I +++G ++ N A+E
Sbjct: 424 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALE 483
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
S + + + A+ G+ L +G +A EA +A + + N+ +AW L
Sbjct: 484 SYSKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQL 543
Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
+F + +A+ EKA + QQ + K + +
Sbjct: 544 ERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKS 603
Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
G LGQ+++AI+ L
Sbjct: 604 LGNSWFKLGQYERAIQAYQESL 625
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
A+ FT+A ++N + +AW +G L EAI KA +++ G
Sbjct: 515 ALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAC 574
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
++ D++ A+ ++ K+N + LG + +G+Y++A +A+ ++++ N
Sbjct: 575 YRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSN 630
>gi|389693671|ref|ZP_10181765.1| TPR repeat-containing protein [Microvirga sp. WSM3557]
gi|388587057|gb|EIM27350.1| TPR repeat-containing protein [Microvirga sp. WSM3557]
Length = 287
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A G Y+SAI+ F + ++ DP Y A R A + A+SDFT +IQ++
Sbjct: 69 TRGAAYARVGNYSSAIADFTKAVQLDPNYAPAYTNRALALRQTSRNDQALSDFTRSIQAD 128
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ G A+ R A + EA+ DL+ A P SA+ LH RG++ + A+ D
Sbjct: 129 PNYGPAYIGRANLYRAQNQYQEALADLNMATRLLPESAEALHSRGLLYQRQGMHQQAILD 188
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
A + + + Y G + + ++ KA E A+ +D +W +
Sbjct: 189 FDATIDRNPFVGAPYAARGQSFVATNQFDKAIEDFNAALNVDNKDANSWAWRGVALERKG 248
Query: 566 NSEKALECLQQVLYID 581
+ +ALE Q+ L +D
Sbjct: 249 DRSQALESYQRALALD 264
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%)
Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
G S I LS ++ PN + RG + ++++A+ D + V+LD AYT
Sbjct: 44 GTSTVNISSLSDVIQRNPNDPSAYNTRGAAYARVGNYSSAIADFTKAVQLDPNYAPAYTN 103
Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
LAL +A ++IQ D N+ A+ Y+ ++AL L +
Sbjct: 104 RALALRQTSRNDQALSDFTRSIQADPNYGPAYIGRANLYRAQNQYQEALADLNMATRLLP 163
Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
++A H RGLL G H++AI D + + +P R + A ++ +A+
Sbjct: 164 ESAEALHSRGLLYQRQGMHQQAILDFDATIDRNPFVGAPYAARGQSFVATNQFDKAI 220
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 14/232 (6%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G IS +++ +P P A RG A A +AI+DFT+A+Q +P+ A+
Sbjct: 43 QGTSTVNISSLSDVIQRNPNDPSAYNTRGAAYARVGNYSSAIADFTKAVQLDPNYAPAYT 102
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
R A + +A+ D +++++ +PN R + + A+ DL+ +L
Sbjct: 103 NRALALRQTSRNDQALSDFTRSIQADPNYGPAYIGRANLYRAQNQYQEALADLNMATRLL 162
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAI-----QLDRN-FLEA-WGHLTQFYQDLAN 566
E+ AL S G + + H +AI +DRN F+ A + Q +
Sbjct: 163 PESAE-------ALHSRGLLYQRQGMHQQAILDFDATIDRNPFVGAPYAARGQSFVATNQ 215
Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+KA+E L +D + + ++ RG+ L G +A++ L +D SN
Sbjct: 216 FDKAIEDFNAALNVDNKDANSWAWRGVALERKGDRSQALESYQRALALDSSN 267
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%)
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ LS ++ + + SAY G A + +G Y A KA+QLD N+ A+ + +
Sbjct: 50 ISSLSDVIQRNPNDPSAYNTRGAAYARVGNYSSAIADFTKAVQLDPNYAPAYTNRALALR 109
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
+ +++AL + + D + AY R L Q+++A+ DL+ + P + E L
Sbjct: 110 QTSRNDQALSDFTRSIQADPNYGPAYIGRANLYRAQNQYQEALADLNMATRLLPESAEAL 169
Query: 623 YLRASCYHAIGEYREAVI 640
+ R Y G +++A++
Sbjct: 170 HSRGLLYQRQGMHQQAIL 187
>gi|434381044|ref|YP_006702827.1| TPR domain-containing protein [Brachyspira pilosicoli WesB]
gi|404429693|emb|CCG55739.1| TPR domain-containing protein [Brachyspira pilosicoli WesB]
Length = 480
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RGIA+ N G Y AI FD+ ++ D Y A RG ++A E AI DF +AI+ N
Sbjct: 308 NRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAIELN 367
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
P+ EA+ RG A+ L + EAI+D KA+E PN++D
Sbjct: 368 PNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNNSD 406
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
Y A RG A+ E AI DF +AI+ + + A+ RG ++A LG + EAI+D +
Sbjct: 302 YLIAYNNRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFN 361
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA---LSSI 530
KA+E PN ++ + RG K + A++D ++L+ N AY + L L++I
Sbjct: 362 KAIELNPNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNNSDAYFNMALPKQLLANI 421
Query: 531 GE 532
E
Sbjct: 422 TE 423
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 61/100 (61%)
Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
AY G+A +++G Y++A + KAI+LD N+L A+ + L N+E+A++ + +
Sbjct: 305 AYNNRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAI 364
Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
++ S+AY+ RG + L Q+++AIKD + ++P+N
Sbjct: 365 ELNPNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNN 404
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
NR + L L++ I+D DKA++LD L AY +G + + LG EEA+ + K E
Sbjct: 308 NRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAIE 365
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%)
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
N+L A+ + +L E+A++ + + +D + AY+ RG+ LG +++AIKD
Sbjct: 301 NYLIAYNNRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDF 360
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + ++P+ E R + + + +Y EA+
Sbjct: 361 NKAIELNPNISEAYNNRGNAKNNLKQYEEAI 391
>gi|298244040|ref|ZP_06967847.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
gi|297557094|gb|EFH90958.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
Length = 515
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 124/296 (41%), Gaps = 49/296 (16%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAISDFTEA 441
RG G Y SA++ F Q +K P + ALI RG + + A++D T+A
Sbjct: 12 RGTVYALAGDYQSALTEFTQAIKLQPSEAANYHSRALIYRGL-----NDPQHALADLTQA 66
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
I P A+ +RG L + +AI D S L FE N L R I + + F
Sbjct: 67 ISLQPEYASAYYQRGLTYYVLKDYHKAIHDFSMVLSFEHNDLQALLGRAISYYALEAFPQ 126
Query: 502 AVEDLSACVKLDKENK---SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
A+ +L + D E AY+ A ++ +Y +A E +A+ + + +
Sbjct: 127 AILNLDRAIAFDPEEAGRLGAYSNRAQAHAAQQQYNEALENFQRALHFAPDDVLLLNRIG 186
Query: 559 QFYQDLANSEKAL---------------------------ECLQQ-------VLYIDKRF 584
Y D + E+A +C Q+ L +D
Sbjct: 187 ATYTDSGHPEQAFPYYDRALKLSTSTPFTYNNRGEAYRLQQCYQEAIADFNRALALDPTL 246
Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAV 639
+ Y+ RGL L L +H +A++D L ++P +++ +Y RA+ Y A+G Y EA+
Sbjct: 247 ATVYYNRGLTLAALNEHTRALQDFQHALELNP-DLDIVYADRAASYAALGMYNEAL 301
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G + G A +D+ LK P RG A Q+ + AI+DF A+ +P+
Sbjct: 186 GATYTDSGHPEQAFPYYDRALKLSTSTPFTYNNRGEAYRLQQCYQEAIADFNRALALDPT 245
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+ RG AAL E A+QD ALE P+ + +R +N A++D
Sbjct: 246 LATVYYNRGLTLAALNEHTRALQDFQHALELNPDLDIVYADRAASYAALGMYNEALQDFQ 305
Query: 508 ACVKLDKENKSAYTYLGLALSSIG-EYKKAEEAHLKAIQLDRNFLEA 553
+ D+EN LA+ G Y + EAH KA+Q D N++ A
Sbjct: 306 RSITHDEENV-------LAIFQRGTTYLRLNEAH-KALQ-DFNYVLA 343
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
++S S + + +RG A + Y AI+ F++ L DP RG A E
Sbjct: 207 KLSTSTPFTYN---NRGEAYRLQQCYQEAIADFNRALALDPTLATVYYNRGLTLAALNEH 263
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
A+ DF A++ NP + R + AALG EA+QD +++ + + + +RG
Sbjct: 264 TRALQDFQHALELNPDLDIVYADRAASYAALGMYNEALQDFQRSITHDEENVLAIFQRGT 323
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ + + A++D + + + AY A +G +A + ++ +LD +
Sbjct: 324 TYLRLNEAHKALQDFNYVLAHEPNLARAYAQRAEAHLRLGNLVQARVDYRQSWELDSTHI 383
Query: 552 E-AW 554
E AW
Sbjct: 384 EPAW 387
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%)
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
+D +N Y G + G+Y+ A +AI+L + + Y+ L + + AL
Sbjct: 1 MDSDNTLEYQKRGTVYALAGDYQSALTEFTQAIKLQPSEAANYHSRALIYRGLNDPQHAL 60
Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
L Q + + ++ AY+ RGL + L + KAI D S L + ++++ L RA Y+A
Sbjct: 61 ADLTQAISLQPEYASAYYQRGLTYYVLKDYHKAIHDFSMVLSFEHNDLQALLGRAISYYA 120
Query: 632 IGEYREAVI 640
+ + +A++
Sbjct: 121 LEAFPQAIL 129
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A + A++ + S + RG+A EAI D ++AL +P A + + RG+
Sbjct: 196 EQAFPYYDRALKLSTSTPFTYNNRGEAYRLQQCYQEAIADFNRALALDPTLATVYYNRGL 255
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
+ A++D ++L+ + Y + +++G Y +A + ++I D +
Sbjct: 256 TLAALNEHTRALQDFQHALELNPDLDIVYADRAASYAALGMYNEALQDFQRSITHDEENV 315
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
A Y L + KAL+ VL + ++AY R LG +A D
Sbjct: 316 LAIFQRGTTYLRLNEAHKALQDFNYVLAHEPNLARAYAQRAEAHLRLGNLVQARVDYRQS 375
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+D ++IE ++ A + +Y A+
Sbjct: 376 WELDSTHIEPAWMGAWLDMCLDDYPGAI 403
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%)
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+++RG A G+ A+ + ++A++ +P+ A H R ++ D A+ DL+ +
Sbjct: 9 YQKRGTVYALAGDYQSALTEFTQAIKLQPSEAANYHSRALIYRGLNDPQHALADLTQAIS 68
Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
L E SAY GL + +Y KA + + N L+A
Sbjct: 69 LQPEYASAYYQRGLTYYVLKDYHKAIHDFSMVLSFEHNDLQA 110
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
NR Y + ++ I D ++AL LDPTL Y +G +AL AL + ++HA
Sbjct: 218 NRGEAYRLQQCYQEAIADFNRALALDPTLATVYYNRGLTLAALNEHTRAL----QDFQHA 273
Query: 134 LHQSADL 140
L + DL
Sbjct: 274 LELNPDL 280
>gi|334121455|ref|ZP_08495523.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333454974|gb|EGK83641.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 1052
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 116/255 (45%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
+ +G+A N +Y A+ F++ + DP +A RG + E + +A+
Sbjct: 761 VGQGVALGNLERYEEALESFEKAIDLDPESVDAWANRGAVQGNLERYEEGLESCEKALHL 820
Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
+P + AW RG L EA++ KAL+ P S D +RG + K + + A+E
Sbjct: 821 DPKSVYAWVNRGNTLNNLERYEEALESYQKALDLAPKSVDAWVKRGNMLRKLERYEEALE 880
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
+ L ++ A+ G+AL + Y++ A +A ++D L+A L
Sbjct: 881 SYQKVIDLAPKSVDAWVNQGIALLDLERYEEVFTACDRAFKIDSKNLQALNTQALALSLL 940
Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
N EKA+ + + + ++ + RG++L G++ +A+ + + +P + Y
Sbjct: 941 KNFEKAITAIDEAISLNPQEVILRANRGIILARAGRYTEALAECEQAIEQNPKHESGYYG 1000
Query: 625 RASCYHAIGEYREAV 639
+A CY GE +A+
Sbjct: 1001 KACCYALQGEIEQAI 1015
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 102/244 (41%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
+Y A+ + + L+ D +G+G A E A+ F +AI +P + +AW R
Sbjct: 738 RYKDALDCYQKALELDQGNASTFVGQGVALGNLERYEEALESFEKAIDLDPESVDAWANR 797
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + L E ++ KAL +P S RG + + A+E + L +
Sbjct: 798 GAVQGNLERYEEGLESCEKALHLDPKSVYAWVNRGNTLNNLERYEEALESYQKALDLAPK 857
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ A+ G L + Y++A E++ K I L ++AW + DL E+
Sbjct: 858 SVDAWVKRGNMLRKLERYEEALESYQKVIDLAPKSVDAWVNQGIALLDLERYEEVFTACD 917
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ ID + +A + + L L L +KAI + + ++P + R G Y
Sbjct: 918 RAFKIDSKNLQALNTQALALSLLKNFEKAITAIDEAISLNPQEVILRANRGIILARAGRY 977
Query: 636 REAV 639
EA+
Sbjct: 978 TEAL 981
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 364 RNKKFCVTRISKSKSIS---VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
+N + +T I ++ S++ V R +RGI G+Y A++ +Q ++++P + G
Sbjct: 941 KNFEKAITAIDEAISLNPQEVILRANRGIILARAGRYTEALAECEQAIEQNPKHESGYYG 1000
Query: 421 RGTARAFQRELEAAISDFTEAIQSNP 446
+ A Q E+E AI + +AI P
Sbjct: 1001 KACCYALQGEIEQAIDNLQKAIDIAP 1026
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 74 NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
NR LE ++ + C+KAL LDP + A++ +G + L R EEAL ++K + A
Sbjct: 796 NRGAVQGNLERYEEGLESCEKALHLDPKSVYAWVNRGNTLNNLERYEEALESYQKALDLA 855
>gi|330508318|ref|YP_004384746.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929126|gb|AEB68928.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 485
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 5/267 (1%)
Query: 357 ETSNEAKRNKKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKED 411
E +E RN F + +KSI +D + +G A V +Y+ A+ +++ ++ D
Sbjct: 48 EKGDEFLRNSTFEIALDCYNKSIELDSTNASIWIKKGRALVGLNRYSEALFAYNESIRLD 107
Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
P A +G A A +I+ F EAI P +W +G + A +G E++Q
Sbjct: 108 PQQAMAWYSKGLALANLGLYNESIAAFDEAIVIQPEVALSWLSKGISLANMGLFNESLQA 167
Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
+ A + N +D+ RG+V + + +V+ +LDK ++ A+ LGLAL S G
Sbjct: 168 MDMAASMDGNLSDVWLNRGLVLAELDRDDESVDSFRRAAQLDKSSEEAWLNLGLALMSKG 227
Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
A A+ +L+ AW + L + ++ E + ID + A++ R
Sbjct: 228 NNSDALAAYENLTELNPINANAWIKKGEALLTLGRAAESSESFYRATMIDPINADAWYGR 287
Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSN 618
+ L G++ ++I+ + + ++P N
Sbjct: 288 AMALRLSGRYNESIEAYNRTVELEPGN 314
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 115/246 (46%), Gaps = 3/246 (1%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR-AFQRELEAAISDFTEAIQ 443
L+ G+A +++G + A++ ++ + + +P+ A I +G A R E++ S F A
Sbjct: 217 LNLGLALMSKGNNSDALAAYENLTELNPINANAWIKKGEALLTLGRAAESSES-FYRATM 275
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
+P +AW R A G E+I+ ++ +E EP ++D + I + + + +N ++
Sbjct: 276 IDPINADAWYGRAMALRLSGRYNESIEAYNRTVELEPGNSDAWNGLAISHVEMERYNESL 335
Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
E +++D + LAL+ +G Y + + ++ + W +L
Sbjct: 336 EWFDRAIEIDPDEIGFQYNKALALNKLGNYSEEVAVLNRTVEQHPDCAVCWNNLGLALAR 395
Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGL-LLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
L + A+E + + ++ + + ++ RG+ ++ G A++ + IDP ++E
Sbjct: 396 LEQYDSAIEAYDRAVELNSSYMEPWNNRGIAMVLGYEDVAGALQSFDRAIQIDPRSVEAW 455
Query: 623 YLRASC 628
+A+
Sbjct: 456 VNKANA 461
>gi|429123158|ref|ZP_19183691.1| hypothetical protein A966_02556 [Brachyspira hampsonii 30446]
gi|426280971|gb|EKV57974.1| hypothetical protein A966_02556 [Brachyspira hampsonii 30446]
Length = 768
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%)
Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
++N Y + I D ILK+ P A + +G +E E A+ F EA + + +
Sbjct: 16 RLNNEDYNQTLEILDVILKKVPKNYRANLYKGQVCVELKEYEDAVRYFEEARRVDIKTFK 75
Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
++ G + A+ + +AI+ ++ L+ PNS + GI F+ KDF A+E+ + +
Sbjct: 76 SYNLLGISYHAIKQYDKAIECFNETLKITPNSFKAYNLLGISYFEKKDFTKAIENFNKAI 135
Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
+++ + A+ L L +Y +A E + LD +A+ L Y ++ N +KA
Sbjct: 136 EINPKYDKAFNNLALFYYKNKKYNEAIEFFEHSKSLDERVFKAYDMLGMSYYNINNYDKA 195
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
+EC + L + + K + G + L + AIK + + I+P
Sbjct: 196 IECFSKFLQYNNKSYKIANTLGAVYSFLKDYDNAIKYFNIAIDINP 241
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 114/252 (45%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G++ N Y AI F + L+ + + G +F ++ + AI F AI NP
Sbjct: 183 GMSYYNINNYDKAIECFSKFLQYNNKSYKIANTLGAVYSFLKDYDNAIKYFNIAIDINPK 242
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ +A KA + + N+ ++ I + K + A+E
Sbjct: 243 YANAYNNLALVYFNRKLFDKAAFYFDKARKLDINAFTDYNKLAISYYSKKYYYEAIECFE 302
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++ + AY ++G+ SS EY KA E K+I+++ + +A+ +L Y +L +
Sbjct: 303 KVIEKNNNAYKAYNFIGVCYSSNEEYDKAIEYFNKSIEINDRYYKAYNNLALAYFNLKDY 362
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
KA+E + + I+ + +Y+ GL + LG+ +K++ L+ L ++PS + +
Sbjct: 363 NKAIENFNKAIDINNNNADSYNGIGLSYYHLGEKEKSLIYLNRALELNPSYSNSYQILFN 422
Query: 628 CYHAIGEYREAV 639
Y + EY A+
Sbjct: 423 IYFDLEEYDNAL 434
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 2/230 (0%)
Query: 377 KSISVDFR--LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
K + ++R L +G V +Y A+ F++ + D ++ G + ++ + A
Sbjct: 34 KKVPKNYRANLYKGQVCVELKEYEDAVRYFEEARRVDIKTFKSYNLLGISYHAIKQYDKA 93
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I F E ++ P++ +A+ G + + +AI++ +KA+E P + + +
Sbjct: 94 IECFNETLKITPNSFKAYNLLGISYFEKKDFTKAIENFNKAIEINPKYDKAFNNLALFYY 153
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
K K +N A+E LD+ AY LG++ +I Y KA E K +Q + +
Sbjct: 154 KNKKYNEAIEFFEHSKSLDERVFKAYDMLGMSYYNINNYDKAIECFSKFLQYNNKSYKIA 213
Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
L Y L + + A++ + I+ +++ AY+ L+ KA
Sbjct: 214 NTLGAVYSFLKDYDNAIKYFNIAIDINPKYANAYNNLALVYFNRKLFDKA 263
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 109/252 (43%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI+ + + AI F++ ++ +P Y +A ++ AI F + +
Sbjct: 115 GISYFEKKDFTKAIENFNKAIEINPKYDKAFNNLALFYYKNKKYNEAIEFFEHSKSLDER 174
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
+A+ G + + +AI+ SK L++ S I + G V KD++ A++ +
Sbjct: 175 VFKAYDMLGMSYYNINNYDKAIECFSKFLQYNNKSYKIANTLGAVYSFLKDYDNAIKYFN 234
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
+ ++ + +AY L L + + KA KA +LD N + L Y
Sbjct: 235 IAIDINPKYANAYNNLALVYFNRKLFDKAAFYFDKARKLDINAFTDYNKLAISYYSKKYY 294
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
+A+EC ++V+ + KAY+ G+ ++ KAI+ + + I+ + A
Sbjct: 295 YEAIECFEKVIEKNNNAYKAYNFIGVCYSSNEEYDKAIEYFNKSIEINDRYYKAYNNLAL 354
Query: 628 CYHAIGEYREAV 639
Y + +Y +A+
Sbjct: 355 AYFNLKDYNKAI 366
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 106/245 (43%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
KY AI F+ D +A G + + AI F++ +Q N + +
Sbjct: 157 KYNEAIEFFEHSKSLDERVFKAYDMLGMSYYNINNYDKAIECFSKFLQYNNKSYKIANTL 216
Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
G + L + AI+ + A++ P A+ + +V F K F+ A KLD
Sbjct: 217 GAVYSFLKDYDNAIKYFNIAIDINPKYANAYNNLALVYFNRKLFDKAAFYFDKARKLDIN 276
Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
+ Y L ++ S Y +A E K I+ + N +A+ + Y +KA+E
Sbjct: 277 AFTDYNKLAISYYSKKYYYEAIECFEKVIEKNNNAYKAYNFIGVCYSSNEEYDKAIEYFN 336
Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
+ + I+ R+ KAY+ L L + KAI++ + + I+ +N + Y+ +GE
Sbjct: 337 KSIEINDRYYKAYNNLALAYFNLKDYNKAIENFNKAIDINNNNADSYNGIGLSYYHLGEK 396
Query: 636 REAVI 640
+++I
Sbjct: 397 EKSLI 401
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 73/145 (50%)
Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
AI F + I+ N +A +A+ G ++ E +AI+ +K++E + +
Sbjct: 297 AIECFEKVIEKNNNAYKAYNFIGVCYSSNEEYDKAIEYFNKSIEINDRYYKAYNNLALAY 356
Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
F KD+N A+E+ + + ++ N +Y +GL+ +GE +K+ +A++L+ ++ +
Sbjct: 357 FNLKDYNKAIENFNKAIDINNNNADSYNGIGLSYYHLGEKEKSLIYLNRALELNPSYSNS 416
Query: 554 WGHLTQFYQDLANSEKALECLQQVL 578
+ L Y DL + AL +++
Sbjct: 417 YQILFNIYFDLEEYDNALTIADKII 441
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%)
Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
D+N +E L +K +N A Y G + EY+ A +A ++D +++ L
Sbjct: 21 DYNQTLEILDVILKKVPKNYRANLYKGQVCVELKEYEDAVRYFEEARRVDIKTFKSYNLL 80
Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
Y + +KA+EC + L I KAY+L G+ KAI++ + + I+P
Sbjct: 81 GISYHAIKQYDKAIECFNETLKITPNSFKAYNLLGISYFEKKDFTKAIENFNKAIEINPK 140
Query: 618 NIECLYLRASCYHAIGEYREAV 639
+ A Y+ +Y EA+
Sbjct: 141 YDKAFNNLALFYYKNKKYNEAI 162
>gi|422304729|ref|ZP_16392069.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
gi|389790038|emb|CCI14001.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
Length = 266
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 71/143 (49%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G YA A S + Q++ + P P RG AR +LE AI+DF +AI P A + +
Sbjct: 49 KGDYAQAESYWSQLVAKFPTNPAVWSNRGNARVNLNKLEDAIADFNQAIAIAPDAPDPYL 108
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A G+ EAI D +K LE +PN A + RG D+ AAV+D +L
Sbjct: 109 NRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLA 168
Query: 514 KENKSAYTYLGLALSSIGEYKKA 536
A L LAL +G Y +A
Sbjct: 169 PNFAWAQANLALALYELGRYPEA 191
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+VN K AI+ F+Q + P P+ + RGTA + + + AI+D+ + ++ +
Sbjct: 75 NRGNARVNLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYNKVLELD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG+ A++D +A + PN A + ++ + AV+
Sbjct: 135 PNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANLALALYELGRYPEAVQK 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + L L S G+ +AE + A+ +D +
Sbjct: 195 MRNIARKYPMFPDVRAALTAVLWSQGQQGEAESNWVAAVGMDTRY 239
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
S +++ + P+ W RG AR L + +AI D ++A+ P++ D RG
Sbjct: 57 SYWSQLVAKFPTNPAVWSNRGNARVNLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEG 116
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ A+ D + ++LD + AY G A +G+++ A + + +A QL NF A
Sbjct: 117 EGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQA 176
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL---LHGLGQHKKAIKDLSSGL 612
+L +L + E +Q++ I +++ +R L L GQ +A + + +
Sbjct: 177 NLALALYELG---RYPEAVQKMRNIARKYPMFPDVRAALTAVLWSQGQQGEAESNWVAAV 233
Query: 613 GID 615
G+D
Sbjct: 234 GMD 236
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A EGKY AI+ ++++L+ DP A RG A + EAA+ D+ +A
Sbjct: 105 DPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQA 164
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q P+ A A LG EA+Q + P D+
Sbjct: 165 TQLAPNFAWAQANLALALYELGRYPEAVQKMRNIARKYPMFPDV 208
>gi|298244613|ref|ZP_06968419.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
gi|297552094|gb|EFH85959.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
Length = 853
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 113/229 (49%), Gaps = 12/229 (5%)
Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQSNPSAGEAWK 453
++ AI+ IL+ D +A++ A+QR + +AA++DF +AI P A+
Sbjct: 382 QFEQAIANQTHILERDDA--DAVMYNNRGYAYQRLEQFQAALADFQQAITLFPRFALAYA 439
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
+ LGE +A ++ +ALE EP +E+ ++ K A+ AC++
Sbjct: 440 NQAGVYRELGEFQKAQDNIQQALELEPTLVLAYNEQAMLLHKLGRHEEAL----ACIRHA 495
Query: 514 KENKSAYTYLGLALSSIG----EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
+E T+ +AL I EY++A A +A++L+ + W L L + +
Sbjct: 496 QEINPHDTHTWVALGGISYDLEEYEQARIAFTRALELEPASADGWYLLGCISIKLGDYSR 555
Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
ALE L Q + +++AYH R LLL+ L Q+++A+ + +DP+N
Sbjct: 556 ALEELSQAAKVRPTYTRAYHERALLLYTLQQYEQALVEFEKAFALDPTN 604
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%)
Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
+ A+ NP EA+ R + L + A++DL+ +EF P+ R +V K +
Sbjct: 323 SRALALNPRFYEAYAHRALIKYELKDYAAALEDLNHVVEFAPDLQVAYKYRALVYHKLEQ 382
Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
F A+ + + ++ D + Y G A + +++ A +AI L F A+ +
Sbjct: 383 FEQAIANQTHILERDDADAVMYNNRGYAYQRLEQFQAALADFQQAITLFPRFALAYANQA 442
Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
Y++L +KA + +QQ L ++ AY+ + +LLH LG+H++A+ + I+P +
Sbjct: 443 GVYRELGEFQKAQDNIQQALELEPTLVLAYNEQAMLLHKLGRHEEALACIRHAQEINPHD 502
Query: 619 IECLYLRASCYHAIGEYREAVI 640
+ + EY +A I
Sbjct: 503 THTWVALGGISYDLEEYEQARI 524
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 123/287 (42%), Gaps = 3/287 (1%)
Query: 353 DMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDP 412
D L+E S +AK + F I ++ S + + + +Y A + L +P
Sbjct: 274 DALEEAS-QAKAD--FYALPIDWAQEASAQLWADQALVLHDAKRYEEAKETCSRALALNP 330
Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
+ EA R + ++ AA+ D ++ P A+K R L + +AI +
Sbjct: 331 RFYEAYAHRALIKYELKDYAAALEDLNHVVEFAPDLQVAYKYRALVYHKLEQFEQAIANQ 390
Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
+ LE + A + + RG + + F AA+ D + L AY +GE
Sbjct: 391 THILERDDADAVMYNNRGYAYQRLEQFQAALADFQQAITLFPRFALAYANQAGVYRELGE 450
Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
++KA++ +A++L+ + A+ L E+AL C++ I+ + + G
Sbjct: 451 FQKAQDNIQQALELEPTLVLAYNEQAMLLHKLGRHEEALACIRHAQEINPHDTHTWVALG 510
Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + L ++++A + L ++P++ + YL +G+Y A+
Sbjct: 511 GISYDLEEYEQARIAFTRALELEPASADGWYLLGCISIKLGDYSRAL 557
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 116/309 (37%), Gaps = 36/309 (11%)
Query: 361 EAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
E + TR + + S D G + G Y+ A+ Q K P Y A
Sbjct: 517 EEYEQARIAFTRALELEPASADGWYLLGCISIKLGDYSRALEELSQAAKVRPTYTRAYHE 576
Query: 421 RGTARAFQRELEAAISDFTEA----------------------------------IQSNP 446
R ++ E A+ +F +A IQ +P
Sbjct: 577 RALLLYTLQQYEQALVEFEKAFALDPTNAKYWSEFTSLLLKLGGNDLVRDMLLRVIQRHP 636
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
+ EAW + A V A Q S+AL+F P++A R + N + K +N+A+ D
Sbjct: 637 TLSEAWFQLASCSAYNDRFVSAHQQYSRALKFNPHNAFAYAMRALCNLEMKHYNSALVDC 696
Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQDLA 565
LD E+ + G +IG+ +A +A + I+ + + W T YQ
Sbjct: 697 RRASALDPEHYLPWQTRGNVFLAIGQNDRAYQAFSQLIERNPDDAANWQTRATASYQAHN 756
Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
++ +C Q L +D+ ++AY R L +AI D + L P ++E
Sbjct: 757 YAQAIADC-TQALTLDEELAEAYLTRAQSQRELAHLTEAIADYQNYLAASPKDMEAWRQL 815
Query: 626 ASCYHAIGE 634
Y +G+
Sbjct: 816 EQVYEMLGD 824
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E A++ A + NP W G L E +A ++ALE EP SAD + G
Sbjct: 486 EEALACIRHAQEINPHDTHTWVALGGISYDLEEYEQARIAFTRALELEPASADGWYLLGC 545
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
++ K D++ A+E+LS K+ AY L L ++ +Y++A KA LD
Sbjct: 546 ISIKLGDYSRALEELSQAAKVRPTYTRAYHERALLLYTLQQYEQALVEFEKAFALDPTNA 605
Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
+ W T L ++ + L +V+ S+A+ + A + S
Sbjct: 606 KYWSEFTSLLLKLGGNDLVRDMLLRVIQRHPTLSEAWFQLASCSAYNDRFVSAHQQYSRA 665
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAVI 640
L +P N +RA C + Y A++
Sbjct: 666 LKFNPHNAFAYAMRALCNLEMKHYNSALV 694
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 19/245 (7%)
Query: 340 DSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYAS 399
D T ++ F +LK N+ R+ V I + ++S + + N+ ++ S
Sbjct: 601 DPTNAKYWSEFTSLLLKLGGNDLVRDMLLRV--IQRHPTLSEAWFQLASCSAYND-RFVS 657
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A + + LK +P A R + +A+ D A +P W+ RG
Sbjct: 658 AHQQYSRALKFNPHNAFAYAMRALCNLEMKHYNSALVDCRRASALDPEHYLPWQTRGNVF 717
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
A+G++ A Q S+ +E P+ A R +++ ++ A+ D + + LD+E A
Sbjct: 718 LAIGQNDRAYQAFSQLIERNPDDAANWQTRATASYQAHNYAQAIADCTQALTLDEELAEA 777
Query: 520 YTYLGLALSSIGEYKKAEEAHL-KAIQLDRNFL-------EAWGHLTQFYQDLANSEKAL 571
YL A S + E AHL +AI +N+L EAW L Q Y+ L + ++AL
Sbjct: 778 --YLTRAQS------QRELAHLTEAIADYQNYLAASPKDMEAWRQLEQVYEMLGDPDRAL 829
Query: 572 ECLQQ 576
QQ
Sbjct: 830 AAHQQ 834
>gi|390441737|ref|ZP_10229773.1| Tetratricopeptide repeat protein [Microcystis sp. T1-4]
gi|389834944|emb|CCI33899.1| Tetratricopeptide repeat protein [Microcystis sp. T1-4]
Length = 266
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 71/143 (49%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G YA A S + Q++ + P P RG AR +LE AI+DF +AI P A + +
Sbjct: 49 KGDYAQAESYWTQLVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYL 108
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A G+ EAI D +K LE +PN A + RG D+ AAV+D +L
Sbjct: 109 NRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLA 168
Query: 514 KENKSAYTYLGLALSSIGEYKKA 536
A L LAL +G Y +A
Sbjct: 169 PNFAWAQANLALALYELGRYPEA 191
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
S +T+ + P+ W RG AR +L + +AI D ++A+ P++ D RG
Sbjct: 57 SYWTQLVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEG 116
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ A+ D + ++LD + AY G A +G+++ A + + +A QL NF A
Sbjct: 117 EGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQA 176
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL---LHGLGQHKKAIKDLSSGL 612
+L +L + E +Q++ I +++ +R L L GQ +A + + +
Sbjct: 177 NLALALYELG---RYPEAVQKMRNIARKYPMFPDVRAALTAVLWSQGQQGEAESNWVAAV 233
Query: 613 GID 615
G+D
Sbjct: 234 GMD 236
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+V+ K AI+ F+Q + P P+ + RGTA + + + AI+D+ + ++ +
Sbjct: 75 NRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYNKVLELD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG+ A++D +A + PN A + ++ + AV+
Sbjct: 135 PNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANLALALYELGRYPEAVQK 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + L L S G+ +AE + A+ +D +
Sbjct: 195 MRNIARKYPMFPDVRAALTAVLWSQGQQGEAESNWVAAVGMDTRY 239
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A EGKY AI+ ++++L+ DP A RG A + EAA+ D+ +A
Sbjct: 105 DPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQA 164
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q P+ A A LG EA+Q + P D+
Sbjct: 165 TQLAPNFAWAQANLALALYELGRYPEAVQKMRNIARKYPMFPDV 208
>gi|166362748|ref|YP_001655021.1| hypothetical protein MAE_00070 [Microcystis aeruginosa NIES-843]
gi|425441994|ref|ZP_18822255.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9717]
gi|166085121|dbj|BAF99828.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
gi|389717135|emb|CCH98726.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9717]
Length = 266
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 71/143 (49%)
Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
+G YA A S + Q++ + P P RG AR +LE AI+DF +AI P A + +
Sbjct: 49 KGDYAQAESYWTQLVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYL 108
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
RG A G+ EAI D +K LE +PN A + RG D+ AAV+D +L
Sbjct: 109 NRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLA 168
Query: 514 KENKSAYTYLGLALSSIGEYKKA 536
A L LAL +G Y +A
Sbjct: 169 PNFAWAQANLALALYELGRYPEA 191
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
S +T+ + P+ W RG AR +L + +AI D ++A+ P++ D RG
Sbjct: 57 SYWTQLVAKFPTNPAVWSNRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEG 116
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ A+ D + ++LD + AY G A +G+++ A + + +A QL NF A
Sbjct: 117 EGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQA 176
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL---LHGLGQHKKAIKDLSSGL 612
+L +L + E +Q++ I +++ +R L L GQ +A + + +
Sbjct: 177 NLALALYELG---RYPEAVQKMRNIARKYPMFPDVRAALSAVLWTQGQQGEAESNWVAAV 233
Query: 613 GID 615
G+D
Sbjct: 234 GMD 236
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
+RG A+V+ K AI+ F+Q + P P+ + RGTA + + + AI+D+ + ++ +
Sbjct: 75 NRGNARVSLNKLEDAIADFNQAIAIAPDAPDPYLNRGTALEGEGKYQEAIADYNKVLELD 134
Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
P+ A+ RG A LG+ A++D +A + PN A + ++ + AV+
Sbjct: 135 PNDAFAYNNRGNAEGGLGDWEAAVKDYRQATQLAPNFAWAQANLALALYELGRYPEAVQK 194
Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+ + L L + G+ +AE + A+ +D +
Sbjct: 195 MRNIARKYPMFPDVRAALSAVLWTQGQQGEAESNWVAAVGMDTRY 239
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%)
Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
D L+RG A EGKY AI+ ++++L+ DP A RG A + EAA+ D+ +A
Sbjct: 105 DPYLNRGTALEGEGKYQEAIADYNKVLELDPNDAFAYNNRGNAEGGLGDWEAAVKDYRQA 164
Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
Q P+ A A LG EA+Q + P D+
Sbjct: 165 TQLAPNFAWAQANLALALYELGRYPEAVQKMRNIARKYPMFPDV 208
>gi|428772587|ref|YP_007164375.1| hypothetical protein Cyast_0753 [Cyanobacterium stanieri PCC 7202]
gi|428686866|gb|AFZ46726.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanobacterium
stanieri PCC 7202]
Length = 246
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
+RI + +RG++ G+Y AI+ ++Q L+ DP Y A I RG + Q
Sbjct: 76 VFSRIITISPFVPEPYYNRGLSFERLGQYQRAIADYNQTLQLDPEYIPAYINRGNLYSLQ 135
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
+ + AI+DFT AI +P+ A+ R + LGE AI D ++ L P+ D ++
Sbjct: 136 DDHQRAINDFTRAINLDPNHYRAYYNRANSYFYLGEYQRAIVDYNQTLTLNPHYYDAIYN 195
Query: 489 RGIVNFKFKDFNAAVEDL--SACVKLDKENKSAY 520
RG+ +++ D +A +DL +A L++ ++++Y
Sbjct: 196 RGLTHYQMGDLESAQKDLFQAARAYLNQNDQNSY 229
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 78/153 (50%)
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ ++L E+G+ + ++ +A+E S + + Y GL+ +G+Y++A +
Sbjct: 53 APEVLFEQGVSLGESGNYQSAIEVFSRIITISPFVPEPYYNRGLSFERLGQYQRAIADYN 112
Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
+ +QLD ++ A+ + Y + ++A+ + + +D +AY+ R LG++
Sbjct: 113 QTLQLDPEYIPAYINRGNLYSLQDDHQRAINDFTRAINLDPNHYRAYYNRANSYFYLGEY 172
Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
++AI D + L ++P + +Y R ++ +G+
Sbjct: 173 QRAIVDYNQTLTLNPHYYDAIYNRGLTHYQMGD 205
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
G++L G Y+ A E + I + E + + ++ L ++A+ Q L +D
Sbjct: 61 GVSLGESGNYQSAIEVFSRIITISPFVPEPYYNRGLSFERLGQYQRAIADYNQTLQLDPE 120
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAVI 640
+ AY RG L H++AI D + + +DP++ Y RA+ Y +GEY+ A++
Sbjct: 121 YIPAYINRGNLYSLQDDHQRAINDFTRAINLDPNHYRAYYNRANSYFYLGEYQRAIV 177
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAI 442
+G++ G Y SAI +F +I+ P PE RG + F+R + + AI+D+ + +
Sbjct: 58 FEQGVSLGESGNYQSAIEVFSRIITISPFVPEPYYNRGLS--FERLGQYQRAIADYNQTL 115
Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
Q +P A+ RG + + AI D ++A+ +PN H R N
Sbjct: 116 QLDPEYIPAYINRGNLYSLQDDHQRAINDFTRAINLDPN-----HYRAYYN--------- 161
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
++Y YLG EY++A + + + L+ ++ +A
Sbjct: 162 -------------RANSYFYLG-------EYQRAIVDYNQTLTLNPHYYDA 192
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%)
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A E +G + G AI+ S+ + P + + RG+ + + A+ D +
Sbjct: 53 APEVLFEQGVSLGESGNYQSAIEVFSRIITISPFVPEPYYNRGLSFERLGQYQRAIADYN 112
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
++LD E AY G S ++++A +AI LD N A+ + Y L
Sbjct: 113 QTLQLDPEYIPAYINRGNLYSLQDDHQRAINDFTRAINLDPNHYRAYYNRANSYFYLGEY 172
Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
++A+ Q L ++ + A + RGL + +G + A KDL
Sbjct: 173 QRAIVDYNQTLTLNPHYYDAIYNRGLTHYQMGDLESAQKDL 213
>gi|386813211|ref|ZP_10100435.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386814261|ref|ZP_10101485.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386402708|dbj|GAB63316.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403758|dbj|GAB64366.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 254
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%)
Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
L+AA+ F +AI+ NP++ EA G G EAI + K LE +PN + G
Sbjct: 30 LDAAMRSFQQAIEINPNSAEAHYNLGIVYHEKGMMEEAINEYKKTLEIDPNFVKAYNNLG 89
Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
+V + AV L V+L + AY LG+A +Y A A KA++ + F
Sbjct: 90 VVYHNAGRLDEAVGSLKKAVELSPQYVEAYYNLGIAYYKKKQYNDAAGAFEKAVEFNPAF 149
Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
+ + +L Y + N ++A++ ++ I+ ++S AY+ G+ + AI+ L
Sbjct: 150 DKGYYNLGIVYSSMDNLDEAIDAFKKATEINPKYSNAYYNLGVTYAKKDHYDDAIQSLQK 209
Query: 611 GLGIDPSN 618
L ++P+N
Sbjct: 210 ALELNPNN 217
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 83/191 (43%), Gaps = 11/191 (5%)
Query: 338 SSDSTESRSKLSFKW---DMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNE 394
+ +S E+ L + M++E NE K+ + + ++ V + N
Sbjct: 44 NPNSAEAHYNLGIVYHEKGMMEEAINEYKKTLEIDPNFVKAYNNLGVVYH--------NA 95
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ A+ + ++ P Y EA G A +++ A F +A++ NP+ + +
Sbjct: 96 GRLDEAVGSLKKAVELSPQYVEAYYNLGIAYYKKKQYNDAAGAFEKAVEFNPAFDKGYYN 155
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
G +++ EAI KA E P ++ + G+ K ++ A++ L ++L+
Sbjct: 156 LGIVYSSMDNLDEAIDAFKKATEINPKYSNAYYNLGVTYAKKDHYDDAIQSLQKALELNP 215
Query: 515 ENKSAYTYLGL 525
N +A+ LG+
Sbjct: 216 NNYNAHFALGV 226
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
GI +G AI+ + + L+ DP + +A G L+ A+ +A++ +P
Sbjct: 55 GIVYHEKGMMEEAINEYKKTLEIDPNFVKAYNNLGVVYHNAGRLDEAVGSLKKAVELSPQ 114
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
EA+ G A + +A KA+EF P + GIV + + A++
Sbjct: 115 YVEAYYNLGIAYYKKKQYNDAAGAFEKAVEFNPAFDKGYYNLGIVYSSMDNLDEAIDAFK 174
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
+++ + +AY LG+ + Y A ++ KA++L+ N
Sbjct: 175 KATEINPKYSNAYYNLGVTYAKKDHYDDAIQSLQKALELNPN 216
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 72/172 (41%), Gaps = 34/172 (19%)
Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
A++ +A+E PNSA+ + GIV Y G+
Sbjct: 33 AMRSFQQAIEINPNSAEAHYNLGIV---------------------------YHEKGMME 65
Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
+I EYKK +++D NF++A+ +L Y + ++A+ L++ + + ++ +A
Sbjct: 66 EAINEYKKT-------LEIDPNFVKAYNNLGVVYHNAGRLDEAVGSLKKAVELSPQYVEA 118
Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
Y+ G+ + Q+ A + +P+ + Y Y ++ EA+
Sbjct: 119 YYNLGIAYYKKKQYNDAAGAFEKAVEFNPAFDKGYYNLGIVYSSMDNLDEAI 170
>gi|186686063|ref|YP_001869259.1| hypothetical protein Npun_R6026 [Nostoc punctiforme PCC 73102]
gi|186468515|gb|ACC84316.1| Tetratricopeptide TPR_4 [Nostoc punctiforme PCC 73102]
Length = 381
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 368 FCVTRISKSKSISVDFR----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
F +++ +IS D +G+ + N A F Q L+ DP AL G
Sbjct: 55 FPGSKLLAETAISQDLEAASFFQQGVTRYNRKDLQGAEYAFRQALQRDPSLGAALNYLGN 114
Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
Q L+ A+ ++TEAI+ NP+ EA+ G G+ AI ++L +P
Sbjct: 115 IFMEQNRLDVALQEYTEAIRINPNFSEAYYNLGLVLHRQGQKDAAITAYRQSLVIDPTKV 174
Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
L+ G+V ++ + A+ + LD N +AY L +AL G+ ++A + +A
Sbjct: 175 AALYNLGLVLYEQEQLPEAIAVYQQAINLDSSNANAYFNLAIALQQQGQTEQAIATYRQA 234
Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
+QLD A+ ++ + +A+ +Q + ++ + + AY+ G+ L+ G KK
Sbjct: 235 LQLDPQNATAYNNMANLLAIQGQASEAISVYRQAIRLNPKNASAYYNLGVTLYNQGDIKK 294
Query: 604 A 604
A
Sbjct: 295 A 295
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 7/213 (3%)
Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
+G R +++L+ A F +A+Q +PS G A G A+Q+ ++A+ P
Sbjct: 78 QGVTRYNRKDLQGAEYAFRQALQRDPSLGAALNYLGNIFMEQNRLDVALQEYTEAIRINP 137
Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
N ++ + G+V + +AA+ + +D +A LGL L + +A +
Sbjct: 138 NFSEAYYNLGLVLHRQGQKDAAITAYRQSLVIDPTKVAALYNLGLVLYEQEQLPEAIAVY 197
Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
+AI LD + A+ +L Q +E+A+ +Q L +D + + AY+ LL GQ
Sbjct: 198 QQAINLDSSNANAYFNLAIALQQQGQTEQAIATYRQALQLDPQNATAYNNMANLLAIQGQ 257
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+AI + ++P N AS Y+ +G
Sbjct: 258 ASEAISVYRQAIRLNPKN-------ASAYYNLG 283
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
+AL+ +P+ L+ G + + + A+++ + ++++ AY LGL L G+
Sbjct: 97 QALQRDPSLGAALNYLGNIFMEQNRLDVALQEYTEAIRINPNFSEAYYNLGLVLHRQGQK 156
Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
A A+ +++ +D + A +L + +A+ QQ + +D + AY +
Sbjct: 157 DAAITAYRQSLVIDPTKVAALYNLGLVLYEQEQLPEAIAVYQQAINLDSSNANAYFNLAI 216
Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIEC-------LYLRASCYHAIGEYREAV 639
L GQ ++AI L +DP N L ++ AI YR+A+
Sbjct: 217 ALQQQGQTEQAIATYRQALQLDPQNATAYNNMANLLAIQGQASEAISVYRQAI 269
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 7/161 (4%)
Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
++G+ + KD A ++ D +A YLG A + + +AI+
Sbjct: 75 FFQQGVTRYNRKDLQGAEYAFRQALQRDPSLGAALNYLGNIFMEQNRLDVALQEYTEAIR 134
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
++ NF EA+ +L + A+ +Q L ID A + GL+L+ Q +AI
Sbjct: 135 INPNFSEAYYNLGLVLHRQGQKDAAITAYRQSLVIDPTKVAALYNLGLVLYEQEQLPEAI 194
Query: 606 KDLSSGLGIDPSNIECLY-------LRASCYHAIGEYREAV 639
+ +D SN + + AI YR+A+
Sbjct: 195 AVYQQAINLDSSNANAYFNLAIALQQQGQTEQAIATYRQAL 235
>gi|220906436|ref|YP_002481747.1| hypothetical protein Cyan7425_1000 [Cyanothece sp. PCC 7425]
gi|219863047|gb|ACL43386.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 219
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
+ +G YA+A++ + Q L+ +P + EA RGT R Q + AI+DF +AI+ +P+ A
Sbjct: 75 LQQGNYAAAVTDYTQALQRNPNFVEAYTNRGTVRTIQGDYPGAIADFDQAIRIDPNNSTA 134
Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
+ RG R G EAI D ++A+ P+ + RG+ D +A+ DL +
Sbjct: 135 YANRGTTRTIQGNFPEAIADFTQAIRLNPSDPTPYYNRGVARALSGDKQSAIGDLQQAIS 194
Query: 512 LDKENKS 518
L ++ S
Sbjct: 195 LYQKQGS 201
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%)
Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
V+ +RG + +G Y AI+ FDQ ++ DP A RGT R Q AI+DFT+
Sbjct: 98 VEAYTNRGTVRTIQGDYPGAIADFDQAIRIDPNNSTAYANRGTTRTIQGNFPEAIADFTQ 157
Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
AI+ NPS + RG ARA G+ AI DL +A+
Sbjct: 158 AIRLNPSDPTPYYNRGVARALSGDKQSAIGDLQQAISL 195
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 12/136 (8%)
Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
Q AA++D+T+A+Q NP+ EA+ RG R G+ AI D +A+ +PN++
Sbjct: 77 QGNYAAAVTDYTQALQRNPNFVEAYTNRGTVRTIQGDYPGAIADFDQAIRIDPNNSTAYA 136
Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-------LSSIGEYKKA---- 536
RG +F A+ D + ++L+ + + Y G+A S+IG+ ++A
Sbjct: 137 NRGTTRTIQGNFPEAIADFTQAIRLNPSDPTPYYNRGVARALSGDKQSAIGDLQQAISLY 196
Query: 537 -EEAHLKAIQLDRNFL 551
++ L+A Q RN L
Sbjct: 197 QKQGSLQASQEARNLL 212
>gi|443318899|ref|ZP_21048141.1| serine/threonine protein kinase [Leptolyngbya sp. PCC 6406]
gi|442781537|gb|ELR91635.1| serine/threonine protein kinase [Leptolyngbya sp. PCC 6406]
Length = 639
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 3/213 (1%)
Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
E E AI+ + A+ P +A RG A G+S A+ DL++ALE P A + ++R
Sbjct: 355 ETETAIAHYDAALARMPQNAQALTERGMLNAQRGQSNAALADLTQALEINPKQATLFYQR 414
Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
G V F D A+ED + ++LD AY G A + G+ + A + + +A+ L +
Sbjct: 415 GNVRFGVGDIQGALEDYTQALRLDSTLVKAYLNRGSARADWGDEQGAIQDYTQALALSTD 474
Query: 550 F-LEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
++A +L + Y ++ +AL+ + + + S AY RGL+ LG + +I+
Sbjct: 475 QEVQAAAYLNRCLSYSNIDQQGQALKDCTEAINLRPSHSLAYENRGLVRRRLGDFQGSIQ 534
Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
D + + I+P + + Y R ++ ++ A+
Sbjct: 535 DYNIAIQIEPDSPDPYYNRGLTRQSLRDFPGAL 567
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 16/259 (6%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+ G+ +A++ Q L+ +P RG R +++ A+ D+T+A++ +
Sbjct: 380 RGMLNAQRGQSNAALADLTQALEINPKQATLFYQRGNVRFGVGDIQGALEDYTQALRLDS 439
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEF----EPNSADILHERGIVNFKFKDFNAA 502
+ +A+ RG ARA G+ AIQD ++AL E +A L+ R + A
Sbjct: 440 TLVKAYLNRGSARADWGDEQGAIQDYTQALALSTDQEVQAAAYLN-RCLSYSNIDQQGQA 498
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
++D + + L + AY GL +G+++ + + + AIQ++ + + + + Q
Sbjct: 499 LKDCTEAINLRPSHSLAYENRGLVRRRLGDFQGSIQDYNIAIQIEPDSPDPYYNRGLTRQ 558
Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
L + AL + L ++ + A + RGLL LG + AI DL + + +CL
Sbjct: 559 SLRDFPGALADFSKALDLNPEYVFARYDRGLLQAELGNTEAAIADLET------AAQQCL 612
Query: 623 YL-RASCY----HAIGEYR 636
L R CY + +G+ R
Sbjct: 613 SLGRVQCYQDAQYQVGQLR 631
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 114/249 (45%), Gaps = 5/249 (2%)
Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
G+ +AI+ +D L P +AL RG A + + AA++D T+A++ NP + +
Sbjct: 354 GETETAIAHYDAALARMPQNAQALTERGMLNAQRGQSNAALADLTQALEINPKQATLFYQ 413
Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-- 512
RG R +G+ A++D ++AL + RG + D A++D + + L
Sbjct: 414 RGNVRFGVGDIQGALEDYTQALRLDSTLVKAYLNRGSARADWGDEQGAIQDYTQALALST 473
Query: 513 DKENKSAYTYLG--LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
D+E ++A YL L+ S+I + +A + +AI L + A+ + + L + + +
Sbjct: 474 DQEVQAA-AYLNRCLSYSNIDQQGQALKDCTEAINLRPSHSLAYENRGLVRRRLGDFQGS 532
Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
++ + I+ Y+ RGL L A+ D S L ++P + Y R
Sbjct: 533 IQDYNIAIQIEPDSPDPYYNRGLTRQSLRDFPGALADFSKALDLNPEYVFARYDRGLLQA 592
Query: 631 AIGEYREAV 639
+G A+
Sbjct: 593 ELGNTEAAI 601
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 90/189 (47%), Gaps = 3/189 (1%)
Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
R Q GE+ AI AL P +A L ERG++N + NAA+ DL+ ++++
Sbjct: 345 RAAQTAEQAGETETAIAHYDAALARMPQNAQALTERGMLNAQRGQSNAALADLTQALEIN 404
Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
+ + + G +G+ + A E + +A++LD ++A+ + D + + A++
Sbjct: 405 PKQATLFYQRGNVRFGVGDIQGALEDYTQALRLDSTLVKAYLNRGSARADWGDEQGAIQD 464
Query: 574 LQQVLYI--DKRFSKAYHL-RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
Q L + D+ A +L R L + Q +A+KD + + + PS+ R
Sbjct: 465 YTQALALSTDQEVQAAAYLNRCLSYSNIDQQGQALKDCTEAINLRPSHSLAYENRGLVRR 524
Query: 631 AIGEYREAV 639
+G+++ ++
Sbjct: 525 RLGDFQGSI 533
>gi|384208242|ref|YP_005593962.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
gi|343385892|gb|AEM21382.1| putative TPR domain-containing protein [Brachyspira intermedia
PWS/A]
Length = 817
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 124/258 (48%), Gaps = 12/258 (4%)
Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
G+A Y ++I +++ L+ +P Y A I G + + AI + +A++ NP
Sbjct: 456 GLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPD 515
Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
A+ A +L + +++D +KALE + A+I G++ + ++ A+E +
Sbjct: 516 YSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGLIYSRQAIYDKAIEYYN 575
Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD---- 563
++++ +AY + LS++ +Y++ E + K I++ G+ +Y+
Sbjct: 576 KVLEINPNKVNAYYNIAFCLSNMDKYEETLEIYDKVIRM------YPGNFDVYYERGYTK 629
Query: 564 --LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
+ E+A+ ++ ++ + AY+ RG L + +AIKD + + +N +
Sbjct: 630 YRASKYEEAIRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDEAIKDFDKAIEYNANNSDF 689
Query: 622 LYLRASCYHAIGEYREAV 639
RASCY + +YRE++
Sbjct: 690 YSERASCYDYLNKYRESI 707
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 6/252 (2%)
Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
R+ + + +D R++ G+ + Y AI+I+D+++ + P + RG + +
Sbjct: 96 FNRVLQINNNDIDSRVNVGLCYLYMKNYKEAINIYDEVIADFPDNINSYNNRGLCKFYLS 155
Query: 430 ELEAAISDFTEAIQ--SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
+ E AI+DF + I+ N +A A+ G + L E EA++ KA+E PN + H
Sbjct: 156 QFEEAINDFNKVIELDKNSTASMAYNYIGLCKYHLDEITEALKYYEKAIEINPNLINAYH 215
Query: 488 ERGIVNF--KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
++ +F D A+ L+ +++D N Y + + Y +A E K ++
Sbjct: 216 NIALIKHSGEFDD--EALSYLNKALEIDPGNLETYLKIYSIKLDLELYDEANEYLNKILE 273
Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
+ + L + + D E++LE L++ L I+ F AY+ LH L + +A+
Sbjct: 274 MYPDDLYVYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLDLNNEAL 333
Query: 606 KDLSSGLGIDPS 617
+ L L I P+
Sbjct: 334 EYLEKALQIYPN 345
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 122/271 (45%)
Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
C+ +I + + V + +V Y A+S ++ L D E G ++
Sbjct: 369 CLNKILEIDNTDVVIYNEIALIKVELELYDEALSYLNKALDIDTNNAEIYNSIGLVYYYK 428
Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
++ E AI +F +AI+ N S A+ G A + + +IQ +KALE P A
Sbjct: 429 KDYEEAIKNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYIN 488
Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
G++ ++ A++ ++++ + AY + LA S+ +YK + E KA++L
Sbjct: 489 LGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGY 548
Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
+ E + ++ Y A +KA+E +VL I+ AY+ L + ++++ ++
Sbjct: 549 DEAEIYINIGLIYSRQAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKYEETLEIY 608
Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAV 639
+ + P N + Y R + +Y EA+
Sbjct: 609 DKVIRMYPGNFDVYYERGYTKYRASKYEEAI 639
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 37/241 (15%)
Query: 413 MYPEALIGR---GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
MYP+ L G + +E ++ +A++ NP+ +A+ A L + EA+
Sbjct: 274 MYPDDLYVYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLDLNNEAL 333
Query: 470 QDLSKALEFEPNSAD----------------------------------ILHERGIVNFK 495
+ L KAL+ PNSAD I +E ++ +
Sbjct: 334 EYLEKALQIYPNSADTYFKMFLVKRALRDYEGALSCLNKILEIDNTDVVIYNEIALIKVE 393
Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
+ ++ A+ L+ + +D N Y +GL +Y++A + KAI+L+ + A+
Sbjct: 394 LELYDEALSYLNKALDIDTNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTSMASAYY 453
Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
++ Y ++ + E +++ + L I+ +++ AY GL+ H LG +K+AI L I+
Sbjct: 454 NIGLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEIN 513
Query: 616 P 616
P
Sbjct: 514 P 514
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 17/203 (8%)
Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
E AI DF AI+ + RG A+ L EAI+D ++ L+ N D G+
Sbjct: 56 EEAIKDFERAIELGDDGETVYYDRGLAKLYLSFYGEAIEDFNRVLQINNNDIDSRVNVGL 115
Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
K++ A+ + +N ++Y GL + ++++A K I+LD+N
Sbjct: 116 CYLYMKNYKEAINIYDEVIADFPDNINSYNNRGLCKFYLSQFEEAINDFNKVIELDKNST 175
Query: 552 EAWG---------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
+ HL + + L EKA+E I+ AYH L+ H
Sbjct: 176 ASMAYNYIGLCKYHLDEITEALKYYEKAIE-------INPNLINAYHNIALIKHSGEFDD 228
Query: 603 KAIKDLSSGLGIDPSNIECLYLR 625
+A+ L+ L IDP N+E YL+
Sbjct: 229 EALSYLNKALEIDPGNLET-YLK 250
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 121/258 (46%), Gaps = 8/258 (3%)
Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
RG+A++ Y AI F+++L+ + ++ + G + + + AI+ + E I P
Sbjct: 79 RGLAKLYLSFYGEAIEDFNRVLQINNNDIDSRVNVGLCYLYMKNYKEAINIYDEVIADFP 138
Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS-ADILHER-GIVNFKFKDFNAAVE 504
++ RG + L + EAI D +K +E + NS A + + G+ + + A++
Sbjct: 139 DNINSYNNRGLCKFYLSQFEEAINDFNKVIELDKNSTASMAYNYIGLCKYHLDEITEALK 198
Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL-KAIQLDRNFLEAWGHLTQFYQD 563
++++ +AY + L S GE+ ++L KA+++D LE + + D
Sbjct: 199 YYEKAIEINPNLINAYHNIALIKHS-GEFDDEALSYLNKALEIDPGNLETYLKIYSIKLD 257
Query: 564 LANSEKALECLQQVL--YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
L ++A E L ++L Y D + Y G + G +++++ L L I+P+ I+
Sbjct: 258 LELYDEANEYLNKILEMYPDDLY--VYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDA 315
Query: 622 LYLRASCYHAIGEYREAV 639
Y A H + EA+
Sbjct: 316 YYDIAFALHKLDLNNEAL 333
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 426 AFQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
AF+ RE E +I + I N + + + +G ++ LG EAI+D +A+E +
Sbjct: 15 AFENREYEKSIEYIDKVIFYNGDSYDLYHNKGLSKLNLGLYEEAIKDFERAIELGDDGET 74
Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
+ ++RG+ + A+ED + ++++ + + +GL + YK+A + + I
Sbjct: 75 VYYDRGLAKLYLSFYGEAIEDFNRVLQINNNDIDSRVNVGLCYLYMKNYKEAINIYDEVI 134
Query: 545 QLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKR--FSKAYHLRGLLLHGLGQ 600
+ + ++ + L +FY L+ E+A+ +V+ +DK S AY+ GL + L +
Sbjct: 135 ADFPDNINSYNNRGLCKFY--LSQFEEAINDFNKVIELDKNSTASMAYNYIGLCKYHLDE 192
Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
+A+K + I+P+ I + YH I
Sbjct: 193 ITEALKYYEKAIEINPNLI-------NAYHNIA 218
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 100/219 (45%), Gaps = 10/219 (4%)
Query: 365 NKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
N K + K+ I+ D+ L+ +A+++ Y +++ F++ L+ E I
Sbjct: 498 NYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINI 557
Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
G + Q + AI + + ++ NP+ A+ + + + E ++ K + P
Sbjct: 558 GLIYSRQAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKYEETLEIYDKVIRMYPG 617
Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
+ D+ +ERG ++ + A+ D + ++ ++ +AY Y G + + Y +A +
Sbjct: 618 NFDVYYERGYTKYRASKYEEAIRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDEAIKDFD 677
Query: 542 KAIQLDRN---FL----EAWGHLTQFYQDLANSEKALEC 573
KAI+ + N F + +L ++ + + N +KA+E
Sbjct: 678 KAIEYNANNSDFYSERASCYDYLNKYRESIENYDKAIEL 716
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 13/129 (10%)
Query: 362 AKRNKKFCVTRISKSKSI-------------SVDFRLSRGIAQVNEGKYASAISIFDQIL 408
A N FC++ + K + + D RG + KY AI FD I+
Sbjct: 587 AYYNIAFCLSNMDKYEETLEIYDKVIRMYPGNFDVYYERGYTKYRASKYEEAIRDFDIII 646
Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
+ + A RG ++ + + + AI DF +AI+ N + + + R L + E+
Sbjct: 647 NVNSKHYNAYYYRGCSKKYLKNYDEAIKDFDKAIEYNANNSDFYSERASCYDYLNKYRES 706
Query: 469 IQDLSKALE 477
I++ KA+E
Sbjct: 707 IENYDKAIE 715
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 102/234 (43%), Gaps = 7/234 (2%)
Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
A+S ++ L+ DP E + + + + A + ++ P + R G +
Sbjct: 230 ALSYLNKALEIDPGNLETYLKIYSIKLDLELYDEANEYLNKILEMYPDDLYVYDRIGNIK 289
Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
G E+++ L KALE PN D ++ K N A+E L +++ +
Sbjct: 290 IDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLDLNNEALEYLEKALQIYPNSADT 349
Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
Y + L ++ +Y+ A K +++D + + + +L ++AL L + L
Sbjct: 350 YFKMFLVKRALRDYEGALSCLNKILEIDNTDVVIYNEIALIKVELELYDEALSYLNKALD 409
Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
ID ++ Y+ GL+ + +++AIK+ + + ++ S AS Y+ IG
Sbjct: 410 IDTNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTS-------MASAYYNIG 456
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Query: 23 IDELVRVDSVMASAITARIELAKLCSL--RNWSKAIRILDSLLAQSYE-IQDICNRAFCY 79
I++ RV + + I +R+ + LC L +N+ +AI I D ++A + I NR C
Sbjct: 93 IEDFNRVLQINNNDIDSRVNVG-LCYLYMKNYKEAINIYDEVIADFPDNINSYNNRGLCK 151
Query: 80 SQLELHKHVIRDCDKALQLDP--TLLQAYILKGCAFSALGRKEEALSVWEKGYE------ 131
L + I D +K ++LD T AY G L EAL +EK E
Sbjct: 152 FYLSQFEEAINDFNKVIELDKNSTASMAYNYIGLCKYHLDEITEALKYYEKAIEINPNLI 211
Query: 132 HALHQSADLKQ 142
+A H A +K
Sbjct: 212 NAYHNIALIKH 222
>gi|254780436|ref|YP_003064849.1| hypothetical protein CLIBASIA_01605 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040113|gb|ACT56909.1| hypothetical protein CLIBASIA_01605 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 298
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
+R + + G AI + LK +P Y A IGRG +R +L+ A +DF AIQ
Sbjct: 108 NRALIRYKMGDVPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQ 167
Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFKFKDFNAA 502
S G AW R GE ++I+D S+A+ + S D + RGI K++++A
Sbjct: 168 LKTSDGRAWYGRALVYQMRGEYEKSIEDFSQAISLYSSISPDYYNGRGISYLATKNYDSA 227
Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
+ED + LD + S + G+ G Y A + + KA+ +D + A + + Q
Sbjct: 228 LEDFKFAINLDPKKASFWFNGGMVYEMQGSYANAVKYYKKALSVDSRYYRAKNGILRISQ 287
Query: 563 DLANS 567
DL+++
Sbjct: 288 DLSST 292
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 3/208 (1%)
Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
I T I+++PS E + RG G+ +A+ D AL+ P + R ++ +
Sbjct: 55 IDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRALIRY 114
Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS--IGEYKKAEEAHLKAIQLDRNFLE 552
K D A+ D +K++ + AY G + +KA +AIQL +
Sbjct: 115 KMGDVPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSDGR 174
Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH-LRGLLLHGLGQHKKAIKDLSSG 611
AW YQ EK++E Q + + S Y+ RG+ + A++D
Sbjct: 175 AWYGRALVYQMRGEYEKSIEDFSQAISLYSSISPDYYNGRGISYLATKNYDSALEDFKFA 234
Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAV 639
+ +DP + Y G Y AV
Sbjct: 235 INLDPKKASFWFNGGMVYEMQGSYANAV 262
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 3/212 (1%)
Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
+++ P PE RG + E A+ DF A+ NP + + R R +G+
Sbjct: 61 VIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRALIRYKMGDVP 120
Query: 467 EAIQDLSKALEFEPNSADILHERGIV--NFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
AI+D AL+ P+ RG + + ++ D A D ++L + A+
Sbjct: 121 MAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRA 180
Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNF-LEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
L GEY+K+ E +AI L + + + Y N + ALE + + +D +
Sbjct: 181 LVYQMRGEYEKSIEDFSQAISLYSSISPDYYNGRGISYLATKNYDSALEDFKFAINLDPK 240
Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
+ + G++ G + A+K L +D
Sbjct: 241 KASFWFNGGMVYEMQGSYANAVKYYKKALSVD 272
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.127 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,026,219,500
Number of Sequences: 23463169
Number of extensions: 350891259
Number of successful extensions: 1581908
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14775
Number of HSP's successfully gapped in prelim test: 12676
Number of HSP's that attempted gapping in prelim test: 1244996
Number of HSP's gapped (non-prelim): 191469
length of query: 640
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 491
effective length of database: 8,863,183,186
effective search space: 4351822944326
effective search space used: 4351822944326
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)