BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006566
(640 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|164605000|dbj|BAF98296.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Hevea
brasiliensis]
Length = 740
Score = 1189 bits (3077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/636 (89%), Positives = 609/636 (95%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG +PASF GLK+RDS LGF KS+DFVRVCD ++ KSGR++ ++IRNS N ++ EL
Sbjct: 1 MATGAVPASFTGLKTRDSSLGFGKSMDFVRVCDLKRIKSGRKKISMIRNS-NPGPEMVEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPIRVQTMTT+DTKDVAGT
Sbjct: 60 QPASEGSPLLVPRQKYCESVHKTVRRKTRTVMVGNVALGSEHPIRVQTMTTSDTKDVAGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE+LEYT+D+YQKEL+HIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEKLEYTEDDYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLGMRA+ +QQGVAPFEEKHRHYFDFQRRSGQLP+QKEGEEVDYRGVLHRDGSVLMSV
Sbjct: 360 ANLGMRASTVQQGVAPFEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGVLHRDGSVLMSVC 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELP V+D+DARLALKRL+DISMGV
Sbjct: 420 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPVEDNDARLALKRLIDISMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELSTGA+KLLPEGTRLVVS RGDE YEELEILKDIDAT
Sbjct: 480 IVPLSEQLTKPLPNAMVLVNLKELSTGAHKLLPEGTRLVVSARGDEPYEELEILKDIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHDLPF EDKIGRV AARRLFE+LS+N LNFPVIHHIQFPN IHRDDLVIGAGTN GA
Sbjct: 540 MILHDLPFTEDKIGRVHAARRLFEFLSDNALNFPVIHHIQFPNAIHRDDLVIGAGTNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG+LLEAP QDFDFLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGILLEAPDQDFDFLRNTSFNLLQG-CRM 634
>gi|255578864|ref|XP_002530286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Ricinus communis]
gi|223530184|gb|EEF32093.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Ricinus communis]
Length = 716
Score = 1167 bits (3019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/637 (87%), Positives = 602/637 (94%), Gaps = 2/637 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSG-RRRFTVIRNSSNSSSDIAE 59
MATG +P SF GLK+R+S LGF KS+DFVR+CD ++ KSG R+R ++IRNSSN ++ E
Sbjct: 1 MATGAVPTSFTGLKTRESNLGFGKSMDFVRICDLKRIKSGGRKRISMIRNSSNPGPEMVE 60
Query: 60 LQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAG 119
LQPAS GSPLLVPRQKYCES HKTVRRKTRTVMVGNVA+GS+HPIRVQTMTT+DTK+VA
Sbjct: 61 LQPASPGSPLLVPRQKYCESTHKTVRRKTRTVMVGNVALGSDHPIRVQTMTTSDTKNVAA 120
Query: 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA 179
TVEEVMRIAD+GADLVRITVQGKREADACF+IKNSLVQKNYNIPLVADIHFAPSVALR+A
Sbjct: 121 TVEEVMRIADKGADLVRITVQGKREADACFDIKNSLVQKNYNIPLVADIHFAPSVALRIA 180
Query: 180 ECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239
ECFDKIRVNPGNFADRRAQFE+LEYT+D+YQ EL+HIE+VF+PLVEKCKKYGRA+RIGTN
Sbjct: 181 ECFDKIRVNPGNFADRRAQFEKLEYTEDDYQIELEHIEQVFTPLVEKCKKYGRAMRIGTN 240
Query: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299
HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MVQAYRLLVAE
Sbjct: 241 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAE 300
Query: 300 MYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 359
MYV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR
Sbjct: 301 MYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 360
Query: 360 LANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSV 419
LANLGMRA+ +QQGVAPFEEKHRHYFDFQRRSGQLP+QKEGEEVDYRG LHRDGSVLMSV
Sbjct: 361 LANLGMRASAVQQGVAPFEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGALHRDGSVLMSV 420
Query: 420 SLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMG 479
SLDQLK PELLYKSLAAKLVVGMPFKDLATVDSILLRELP +D DARLALKRL+DISMG
Sbjct: 421 SLDQLKVPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPAEDSDARLALKRLIDISMG 480
Query: 480 VITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDA 539
VITPLSEQLTKPLP+AMVLVNL+ELSTGA+KLLPEGTRLVVS+RGDE YEELEILK IDA
Sbjct: 481 VITPLSEQLTKPLPNAMVLVNLKELSTGAHKLLPEGTRLVVSVRGDEPYEELEILKQIDA 540
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
TMILHDLP EDKIGRV AARRLFE+LS+N+LNFPVIHHI FPNGIHRDDLVIGAG N G
Sbjct: 541 TMILHDLPNTEDKIGRVHAARRLFEFLSDNSLNFPVIHHINFPNGIHRDDLVIGAGANAG 600
Query: 600 ALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
ALLVDGLGDG+LLEAP QDFDFLR+TSFNLLQG C M
Sbjct: 601 ALLVDGLGDGILLEAPDQDFDFLRNTSFNLLQG-CRM 636
>gi|225435309|ref|XP_002285130.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Vitis vinifera]
gi|297746253|emb|CBI16309.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 1161 bits (3004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/636 (87%), Positives = 601/636 (94%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG++P SF GL+ D LG +KSVDFVRV D ++ GRR+ +VIRNS N SSDIAEL
Sbjct: 1 MATGSVPTSFSGLRRMDCNLGSSKSVDFVRVSDMQRITYGRRKVSVIRNS-NPSSDIAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
Q +SEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT DTKDVA T
Sbjct: 60 QASSEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM+IAD+GAD+VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMKIADKGADIVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE+LE+TD++YQKEL+HIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEKLEFTDEDYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNP++MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPIIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLGM+A+++QQGVAPFEEKHRHYFDFQRR+GQLP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 360 ANLGMKASDIQQGVAPFEEKHRHYFDFQRRTGQLPVQKEGEEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLK PEL YKSLAAKLV+GMPFKDLATVDSILLRELP VDD+DARL LKRLVD+SMGV
Sbjct: 420 LDQLKTPELFYKSLAAKLVIGMPFKDLATVDSILLRELPPVDDNDARLTLKRLVDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
ITPLSEQLTKPLP+AM LVNL+ELSTGAYKLLPEGTRLVVS+RGDE YE+LEILK++DAT
Sbjct: 480 ITPLSEQLTKPLPNAMALVNLKELSTGAYKLLPEGTRLVVSVRGDEPYEDLEILKEVDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHDLP E+KI RV +ARRLFEYLS+N LNFPVIHHIQFP GIHRDDLVIGAGTN GA
Sbjct: 540 MILHDLPLTEEKISRVHSARRLFEYLSDNALNFPVIHHIQFPKGIHRDDLVIGAGTNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDGLLLEAP QDFDFLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGLLLEAPEQDFDFLRNTSFNLLQG-CRM 634
>gi|224106738|ref|XP_002314268.1| predicted protein [Populus trichocarpa]
gi|222850676|gb|EEE88223.1| predicted protein [Populus trichocarpa]
Length = 741
Score = 1160 bits (3000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/636 (87%), Positives = 604/636 (94%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG +PASF GL+ ++SGLGF KS+DFVR+CD ++ KSGR++ ++IRNS N+ DI EL
Sbjct: 1 MATGAVPASFSGLQMKESGLGFGKSMDFVRICDIKRIKSGRKKISMIRNS-NTGRDIVEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGS LLVPRQKYCESI+KTVRRKTRTVMVGNV +GSEHPIR+QTMTT DTKDVA T
Sbjct: 60 QPASEGSSLLVPRQKYCESINKTVRRKTRTVMVGNVPLGSEHPIRIQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM IAD+GAD+VR+TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV+E
Sbjct: 120 VEQVMIIADKGADIVRLTVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVSE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE+LEYTDD+YQKEL+HIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEKLEYTDDDYQKELEHIEKVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPVVMVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCR+L
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRKL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLGMRAA++QQGVAPF+EK+R YFDFQRRSGQLP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 360 ANLGMRAAKIQQGVAPFKEKYRRYFDFQRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLYKSLAAK+VVGMPFKDLATVDSI LRELP VDD+DARLALKRL+++SMGV
Sbjct: 420 LDQLKAPELLYKSLAAKIVVGMPFKDLATVDSIFLRELPPVDDNDARLALKRLIEVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELSTGAYKLLPEGTRLVVSLRGDE YEELEILK IDAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSTGAYKLLPEGTRLVVSLRGDEPYEELEILKHIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
M+LHDLPF+EDKIGRV ARRLFEYL+EN LN PVIHH+QFP GIHRD+LVIGAGTN GA
Sbjct: 540 MLLHDLPFSEDKIGRVHTARRLFEYLAENALNVPVIHHLQFPKGIHRDELVIGAGTNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG+L+EAP QDFDFLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGVLIEAPDQDFDFLRNTSFNLLQG-CRM 634
>gi|402770461|gb|AFQ98370.1| hydroxymethylbutenyl diphosphate synthase [Camellia sinensis]
Length = 741
Score = 1156 bits (2990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/636 (87%), Positives = 598/636 (94%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG +PASF GLKSRD GLGF KS+DFV+VCD ++ K R + +VIRNS N S+IAEL
Sbjct: 1 MATGAVPASFTGLKSRDHGLGFVKSMDFVKVCDLQRVKFRRTKVSVIRNS-NPGSEIAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPL+VPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTT DTKDV T
Sbjct: 60 QPASEGSPLVVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTTDTKDVDAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VMRIAD GAD+VRITVQGKREADAC+EIKNSLVQKNY IPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMRIADTGADIVRITVQGKREADACYEIKNSLVQKNYTIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFEQLEYT+D+YQKEL+HIE VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEHVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
A GM+AAELQQGVAPFEEK+R YFDFQRR+GQLP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 360 AKFGMKAAELQQGVAPFEEKNRRYFDFQRRTGQLPVQKEGEEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
+DQLK PELLYKSLAAKLVVGMPFKDLATVDSILLRELP DD+D+RLALKRL++ISMGV
Sbjct: 420 MDQLKTPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPADDNDSRLALKRLIEISMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS+GAYKLLPEGTRLVVS+RGDE YE+L+ILK++DAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSSGAYKLLPEGTRLVVSVRGDEPYEDLDILKNVDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
M+LHDLP+ EDKI RV AARRLFE+LSEN L+ PVIHHIQFP GIHRDDLVIGAG+N GA
Sbjct: 540 MVLHDLPYTEDKISRVHAARRLFEFLSENALDLPVIHHIQFPKGIHRDDLVIGAGSNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG+LLEAP QDFDFLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGVLLEAPDQDFDFLRNTSFNLLQG-CRM 634
>gi|147798613|emb|CAN72185.1| hypothetical protein VITISV_005654 [Vitis vinifera]
Length = 740
Score = 1154 bits (2985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/636 (86%), Positives = 599/636 (94%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG++P SF GL+ D LG +KSVDFVRV D ++ GRR+ +VIRNS N SSDIAEL
Sbjct: 1 MATGSVPTSFSGLRRMDCNLGSSKSVDFVRVSDMQRITYGRRKVSVIRNS-NPSSDIAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
Q +SEGSPLLVPRQKYCESIHKTVRRKT TVMVGNVA+GSEHPIR+QTMTT DTKDVA T
Sbjct: 60 QASSEGSPLLVPRQKYCESIHKTVRRKTCTVMVGNVALGSEHPIRIQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM+IAD+GAD+VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMKIADKGADIVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE+LE+TD++YQKEL+HIE+VF+PLVEKCKKY RA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEKLEFTDEDYQKELEHIEQVFTPLVEKCKKYXRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNP++MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPIIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLGM+A+++QQGVAPFEEKHRHYFDFQRR+GQLP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 360 ANLGMKASDIQQGVAPFEEKHRHYFDFQRRTGQLPVQKEGEEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLK PEL YKSLAAKLV+GMPFKDLATVDSILLRELP VDD+DARL LKRLVD+SMGV
Sbjct: 420 LDQLKTPELFYKSLAAKLVIGMPFKDLATVDSILLRELPPVDDNDARLTLKRLVDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
ITPLSEQLTKPLP+AM LVNL+ELSTGAYKLLPEGTRLVVS+RGDE YE+LEILK++DAT
Sbjct: 480 ITPLSEQLTKPLPNAMALVNLKELSTGAYKLLPEGTRLVVSVRGDEPYEDLEILKEVDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHDLP E+KI RV +ARRLFEYLS+N LNFPVIHHIQFP GIHRDDLVIGAGTN GA
Sbjct: 540 MILHDLPLTEEKISRVHSARRLFEYLSDNALNFPVIHHIQFPKGIHRDDLVIGAGTNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDGLLLEAP QDFDFLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGLLLEAPEQDFDFLRNTSFNLLQG-CRM 634
>gi|356543460|ref|XP_003540178.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase-like [Glycine max]
Length = 741
Score = 1145 bits (2962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/637 (86%), Positives = 600/637 (94%), Gaps = 3/637 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKS-GRRRFTVIRNSSNSSSDIAE 59
MA+G +P +F LK+ DS LGFAKS+DFVRV D + KS R+R ++IRNS N DIAE
Sbjct: 1 MASGAVPTTFSTLKTWDSSLGFAKSMDFVRVSDLKSMKSSARKRVSIIRNS-NPGQDIAE 59
Query: 60 LQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAG 119
LQPAS GSPLLVPRQKYCES+HKTVRRKT TVMVGNVAIGSEHPIR+QTMTT DTKDVAG
Sbjct: 60 LQPASPGSPLLVPRQKYCESLHKTVRRKTNTVMVGNVAIGSEHPIRIQTMTTTDTKDVAG 119
Query: 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA 179
TVE+VMRIAD+GAD+VRITVQGK+EADACFEIKN+LVQKNYNIPLVADIHFAPSVALRVA
Sbjct: 120 TVEQVMRIADKGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVA 179
Query: 180 ECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239
ECFDKIRVNPGNFADRRAQFE LEYT+++YQKEL+HIE+VF+PLVEKCKKYGRA+RIGTN
Sbjct: 180 ECFDKIRVNPGNFADRRAQFETLEYTEEDYQKELEHIEKVFTPLVEKCKKYGRAMRIGTN 239
Query: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299
HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAE
Sbjct: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAE 299
Query: 300 MYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 359
MYV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRR
Sbjct: 300 MYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRR 359
Query: 360 LANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSV 419
LANLGM A+ELQ+GV PFEEKHRHYFDFQRRSGQLP+QKEGEEVDYRGVLHRDGSVLMSV
Sbjct: 360 LANLGMIASELQKGVEPFEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGVLHRDGSVLMSV 419
Query: 420 SLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMG 479
SLDQLK PE+LYKSLAAKL+VGMPFKDLATVDSILLRE+P VDD DARLALKRL+DISMG
Sbjct: 420 SLDQLKMPEVLYKSLAAKLIVGMPFKDLATVDSILLREVPPVDDADARLALKRLIDISMG 479
Query: 480 VITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDA 539
VITPLSEQLTKPLP+AMVLVNL+E+S+ AYKLLP+GTRLVVS+RGDE YEEL+ILK IDA
Sbjct: 480 VITPLSEQLTKPLPNAMVLVNLKEISSRAYKLLPQGTRLVVSVRGDEPYEELDILKGIDA 539
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
TM+LHDLP+ EDKI RV AARRLFEYLS+N+LNFPVIHHIQFPNGIHRDDLVIGAG++ G
Sbjct: 540 TMLLHDLPYTEDKISRVHAARRLFEYLSDNSLNFPVIHHIQFPNGIHRDDLVIGAGSDAG 599
Query: 600 ALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
ALLVDGLGDGLLLEAP +DF+F+R+TSFNLLQG C M
Sbjct: 600 ALLVDGLGDGLLLEAPDKDFEFIRNTSFNLLQG-CRM 635
>gi|297793619|ref|XP_002864694.1| hypothetical protein ARALYDRAFT_919295 [Arabidopsis lyrata subsp.
lyrata]
gi|297310529|gb|EFH40953.1| hypothetical protein ARALYDRAFT_919295 [Arabidopsis lyrata subsp.
lyrata]
Length = 741
Score = 1144 bits (2960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/636 (85%), Positives = 596/636 (93%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA G+K DS LGF KS++ R+CD R +S RRR +VIRNS N SD+AEL
Sbjct: 1 MATGVLPAPVSGVKVPDSKLGFGKSMNLARICDVRSLRSARRRVSVIRNS-NQGSDVAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT+DTKD+AGT
Sbjct: 60 QPASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDIAGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V+EVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VDEVMRIADRGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPAVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE +EYT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFETIEYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG++AAELQQGVAPFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 360 ANLGIKAAELQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDDH ARLALKRL+D+SMGV
Sbjct: 420 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDHMARLALKRLIDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLPEGTRLVVSLRGDE YEELEILK++DAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNMDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHD+PF EDK+ RV AARRLFE+LSEN+++FPVIHHI FP GIHRD+LVI AGT GA
Sbjct: 540 MILHDVPFTEDKVSRVHAARRLFEFLSENSVSFPVIHHINFPTGIHRDELVIHAGTYAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG++LEAP QDF+FLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGVMLEAPDQDFEFLRNTSFNLLQG-CRM 634
>gi|312282499|dbj|BAJ34115.1| unnamed protein product [Thellungiella halophila]
Length = 742
Score = 1144 bits (2960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/636 (85%), Positives = 596/636 (93%), Gaps = 1/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA F G+KS S LGF K+++FVR+CD R +S RRR +V+ +SN SD+AEL
Sbjct: 1 MATGVLPAPFSGVKSSGSKLGFGKNINFVRICDLRSQRSARRRVSVVIRNSNQGSDLAEL 60
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPAS+GSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT+DTKDVAGT
Sbjct: 61 QPASDGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDVAGT 120
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VEEVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 121 VEEVMRIADRGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAE 180
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE +EYT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 181 CFDKIRVNPGNFADRRAQFETIEYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 240
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 300
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 360
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG +AA+LQQGVAPFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 361 ANLGTKAAQLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 420
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDD+ ARLALKRL+D+SMGV
Sbjct: 421 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDNVARLALKRLIDVSMGV 480
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLP+GTRLVVS+RGDE Y ELE+LK++DAT
Sbjct: 481 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPDGTRLVVSVRGDEPYSELEVLKNVDAT 540
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHDLPF EDK+ RV AARRLFE+LSEN++NFPVIHHI FP GIHRD+LVI AGT GA
Sbjct: 541 MILHDLPFTEDKVSRVHAARRLFEFLSENSINFPVIHHINFPTGIHRDELVIHAGTYAGA 600
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG++LEAP QDFDFLR+TSFNLLQG C M
Sbjct: 601 LLVDGLGDGVMLEAPDQDFDFLRNTSFNLLQG-CRM 635
>gi|356550161|ref|XP_003543457.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase-like [Glycine max]
Length = 742
Score = 1144 bits (2959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/638 (85%), Positives = 600/638 (94%), Gaps = 4/638 (0%)
Query: 1 MATGT-LPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKS-GRRRFTVIRNSSNSSSDIA 58
MATG +P +F LK+ DS LGFAK++DFVRV D + KS R+R ++IRNS N DIA
Sbjct: 1 MATGAAVPTTFSTLKTWDSSLGFAKNIDFVRVSDMKSMKSSARKRVSIIRNS-NPGQDIA 59
Query: 59 ELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVA 118
ELQPAS GSPLLVPRQKYCES+HK +RRKT TVMVGNVAIGSEHPIR+QTMTT DTKDVA
Sbjct: 60 ELQPASPGSPLLVPRQKYCESLHKPIRRKTSTVMVGNVAIGSEHPIRIQTMTTTDTKDVA 119
Query: 119 GTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV 178
GTVE+VMRIAD+GAD+VRITVQGK+EADACFEIKN+LVQKNYNIPLVADIHFAPSVALRV
Sbjct: 120 GTVEQVMRIADKGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRV 179
Query: 179 AECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238
AECFDKIRVNPGNFADRRAQFE LEYT+++YQKEL+HIE+VF+PLVEKCKKYGRA+RIGT
Sbjct: 180 AECFDKIRVNPGNFADRRAQFETLEYTEEDYQKELEHIEKVFTPLVEKCKKYGRAMRIGT 239
Query: 239 NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 298
NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVA
Sbjct: 240 NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVA 299
Query: 299 EMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCR 358
EMYV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCR
Sbjct: 300 EMYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCR 359
Query: 359 RLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMS 418
RLANLGMRA+ELQ+GV PFEEKHRHYFDFQRRSGQLP+QKEGEEVDYRG LHRDGSVLMS
Sbjct: 360 RLANLGMRASELQKGVEPFEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGALHRDGSVLMS 419
Query: 419 VSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISM 478
VSLDQLK PE+LYKSLAAKL+VGMPFKDLATVDSILLRELP VDD DARLALKRL+DISM
Sbjct: 420 VSLDQLKMPEVLYKSLAAKLIVGMPFKDLATVDSILLRELPPVDDADARLALKRLIDISM 479
Query: 479 GVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDID 538
GVITPL+EQLTKPLP+AMVLVNL+E+STGAYKLLP+GTRLVVS+RGDE YEEL+ILK +D
Sbjct: 480 GVITPLTEQLTKPLPNAMVLVNLKEISTGAYKLLPQGTRLVVSVRGDEPYEELDILKGVD 539
Query: 539 ATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNV 598
ATM+LHDLP+ ED+I RV AARRLFEYLS+N+LNFPVIHHIQFPNGIHRDDLVIGAG++
Sbjct: 540 ATMLLHDLPYTEDRISRVHAARRLFEYLSDNSLNFPVIHHIQFPNGIHRDDLVIGAGSDA 599
Query: 599 GALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
GALLVDGLGDGLLLEAP +DF+F+R+TSFNLLQG C M
Sbjct: 600 GALLVDGLGDGLLLEAPDKDFEFIRNTSFNLLQG-CRM 636
>gi|30697395|ref|NP_851233.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
thaliana]
gi|391359289|sp|F4K0E8.1|ISPG_ARATH RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
chloroplastic; AltName:
Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase; AltName: Full=Protein CHLOROPLAST BIOGENESIS
4; AltName: Full=Protein CONSTITUTIVE SUBTILISIN 3;
Flags: Precursor
gi|332009970|gb|AED97353.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
thaliana]
Length = 741
Score = 1141 bits (2951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/636 (85%), Positives = 593/636 (93%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA G+K DS +GF KS++ VR+CD R +S RRR +VIRNS N SD+AEL
Sbjct: 1 MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNS-NQGSDLAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT+DTKD+ GT
Sbjct: 60 QPASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V+EVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VDEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE ++YT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG +AA+LQQGVAPFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 360 ANLGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDD ARLALKRL+D+SMGV
Sbjct: 420 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLPEGTRLVVSLRGDE YEELEILK+IDAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHD+PF EDK+ RV AARRLFE+LSEN++NFPVIHHI FP GIHRD+LVI AGT G
Sbjct: 540 MILHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGG 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG++LEAP QDFDFLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGVMLEAPDQDFDFLRNTSFNLLQG-CRM 634
>gi|186532618|ref|NP_001119467.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
thaliana]
gi|332009972|gb|AED97355.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
thaliana]
Length = 717
Score = 1139 bits (2946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/636 (85%), Positives = 593/636 (93%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA G+K DS +GF KS++ VR+CD R +S RRR +VIRNS N SD+AEL
Sbjct: 1 MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNS-NQGSDLAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT+DTKD+ GT
Sbjct: 60 QPASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V+EVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VDEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE ++YT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG +AA+LQQGVAPFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 360 ANLGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDD ARLALKRL+D+SMGV
Sbjct: 420 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLPEGTRLVVSLRGDE YEELEILK+IDAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHD+PF EDK+ RV AARRLFE+LSEN++NFPVIHHI FP GIHRD+LVI AGT G
Sbjct: 540 MILHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGG 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG++LEAP QDFDFLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGVMLEAPDQDFDFLRNTSFNLLQG-CRM 634
>gi|20453201|gb|AAM19840.1| AT5g60600/mup24_10 [Arabidopsis thaliana]
Length = 741
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/636 (85%), Positives = 593/636 (93%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA G+K DS +GF KS++ VR+CD R +S RRR +VIRNS N SD+AEL
Sbjct: 1 MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNS-NQGSDLAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVG+VA+GSEHPIR+QTMTT+DTKD+ GT
Sbjct: 60 QPASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGDVALGSEHPIRIQTMTTSDTKDITGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V+EVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VDEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE ++YT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG +AA+LQQGVAPFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 360 ANLGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDD ARLALKRL+D+SMGV
Sbjct: 420 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLPEGTRLVVSLRGDE YEELEILK+IDAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHD+PF EDK+ RV AARRLFE+LSEN++NFPVIHHI FP GIHRD+LVI AGT G
Sbjct: 540 MILHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGG 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG++LEAP QDFDFLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGVMLEAPDQDFDFLRNTSFNLLQG-CRM 634
>gi|224132490|ref|XP_002328295.1| predicted protein [Populus trichocarpa]
gi|222837810|gb|EEE76175.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 1138 bits (2944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/656 (84%), Positives = 600/656 (91%), Gaps = 22/656 (3%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG +PASF GLK R+S LGF KSVDFVR+CD ++ KSGR+R ++I+NS N+ I EL
Sbjct: 1 MATGAVPASFSGLKMRESSLGFGKSVDFVRICDIKRIKSGRKRISMIQNS-NTGPGIVEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPR+KYCESI+KTVRRKTRTV+VGNV +GSEHP+RVQTMTT DTKDVA T
Sbjct: 60 QPASEGSPLLVPRKKYCESINKTVRRKTRTVLVGNVPLGSEHPVRVQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VMRIAD+GAD+VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMRIADKGADIVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE--------------------EVF 220
CFDKIRVNPGNFADRRAQFE+LEYT+D+Y+KEL+HIE +VF
Sbjct: 180 CFDKIRVNPGNFADRRAQFEKLEYTEDDYEKELEHIENTPLSKWSPIKSFDFYFLLCQVF 239
Query: 221 SPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFS 280
+PLVEKCKKYGRA+RIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FS
Sbjct: 240 TPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFS 299
Query: 281 MKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGD 340
MKASNPVVMVQAYRLLVAEMYV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGD
Sbjct: 300 MKASNPVVMVQAYRLLVAEMYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGD 359
Query: 341 TIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEG 400
TIRVSLTEPPE+EIDPCRRLANLGMRAAE+QQGVAPFEEKHRHYFDFQRRSGQLP+QKEG
Sbjct: 360 TIRVSLTEPPEEEIDPCRRLANLGMRAAEIQQGVAPFEEKHRHYFDFQRRSGQLPVQKEG 419
Query: 401 EEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPS 460
EEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAK+VVGMPFKDLATVDSI LRELP
Sbjct: 420 EEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKIVVGMPFKDLATVDSIFLRELPP 479
Query: 461 VDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVV 520
VDD+DARLALKRL+++SMGVI PLSEQLTKPLP+AMVLVNL+ELSTGAYKLLPEGTRLVV
Sbjct: 480 VDDNDARLALKRLIEVSMGVIAPLSEQLTKPLPNAMVLVNLKELSTGAYKLLPEGTRLVV 539
Query: 521 SLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQ 580
SLRGDE EELEIL+ +DATMILH LP +EDKIGRV AARRLFEYL + L+ PVIHHIQ
Sbjct: 540 SLRGDEPCEELEILEHVDATMILHVLPLSEDKIGRVHAARRLFEYLVDKALSVPVIHHIQ 599
Query: 581 FPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
FP G+ RDDLVIGAGT+ GALLVDGLGDG+L+EAP QDFDFLR+TSFNLLQG C M
Sbjct: 600 FPKGVRRDDLVIGAGTDAGALLVDGLGDGVLIEAPDQDFDFLRNTSFNLLQG-CRM 654
>gi|19698829|gb|AAL91150.1| GcpE protein [Arabidopsis thaliana]
gi|34365569|gb|AAQ65096.1| At5g60600 [Arabidopsis thaliana]
Length = 741
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/636 (85%), Positives = 592/636 (93%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA G+K DS +GF KS++ VR+CD R +S RRR +VIRNS N SD+AEL
Sbjct: 1 MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNS-NQGSDLAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPI +QTMTT+DTKD+ GT
Sbjct: 60 QPASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIGIQTMTTSDTKDITGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V+EVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VDEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE ++YT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG +AA+LQQGVAPFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 360 ANLGTKAAKLQQGVAPFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDD ARLALKRL+D+SMGV
Sbjct: 420 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLPEGTRLVVSLRGDE YEELEILK+IDAT
Sbjct: 480 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHD+PF EDK+ RV AARRLFE+LSEN++NFPVIHHI FP GIHRD+LVI AGT G
Sbjct: 540 MILHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGG 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG++LEAP QDFDFLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGVMLEAPDQDFDFLRNTSFNLLQG-CRM 634
>gi|374639359|gb|AEZ55668.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Salvia
miltiorrhiza]
Length = 742
Score = 1135 bits (2937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/637 (85%), Positives = 596/637 (93%), Gaps = 2/637 (0%)
Query: 1 MATGTLPASFPGLKSRDS-GLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAE 59
MATG +PASF GLKSRD GLGF KS DFVRV D ++ K GR + VIRNS+N S+ E
Sbjct: 1 MATGAVPASFTGLKSRDHRGLGFGKSSDFVRVSDLQRVKFGRSKVAVIRNSNNPGSETVE 60
Query: 60 LQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAG 119
L+PASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT DTKD+AG
Sbjct: 61 LKPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDIAG 120
Query: 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA 179
TVE+VMRIADQGADLVRITVQG++EADACFEIKNSLVQKNYNIPLVADIHFAP VA+RVA
Sbjct: 121 TVEQVMRIADQGADLVRITVQGRKEADACFEIKNSLVQKNYNIPLVADIHFAPPVAMRVA 180
Query: 180 ECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239
ECFDKIRVNPGNFADRRAQFEQLEYTDD+YQKEL+HIE+VFSPLVEKCKKYGRA+RIGTN
Sbjct: 181 ECFDKIRVNPGNFADRRAQFEQLEYTDDDYQKELEHIEKVFSPLVEKCKKYGRAMRIGTN 240
Query: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299
HGSLSDRIMSYYGDSPRGMVESAFE+ARICRKLDFHNF+FSMKASNPV+MVQAYRLLVAE
Sbjct: 241 HGSLSDRIMSYYGDSPRGMVESAFEYARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAE 300
Query: 300 MYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 359
M V GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EIDPCRR
Sbjct: 301 MNVLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDPCRR 360
Query: 360 LANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSV 419
LANLGM+ AELQ+GVAPFEEK+R YFDFQRR+GQLP+QKEGEEVDYRGVLHRDGSVLMSV
Sbjct: 361 LANLGMKTAELQKGVAPFEEKNRRYFDFQRRNGQLPVQKEGEEVDYRGVLHRDGSVLMSV 420
Query: 420 SLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMG 479
SLDQLK+PELLYKSLAAKL+VGMPFKDLATVDSILLRELPS DD DARLALKRL+D+SMG
Sbjct: 421 SLDQLKSPELLYKSLAAKLIVGMPFKDLATVDSILLRELPSQDDKDARLALKRLIDVSMG 480
Query: 480 VITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDA 539
VITPLSEQLTKPLP+A+ +V L+ELS+GA++LLPEGTRLVVSLRGDE EELEILK DA
Sbjct: 481 VITPLSEQLTKPLPNALAMVTLKELSSGAHQLLPEGTRLVVSLRGDEPQEELEILKTADA 540
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
TMILH +P++++K RV AARRLFEYLSEN+L+FPVIHHI+FP GIHRDDLVIGAGTN G
Sbjct: 541 TMILHHIPYSDEKTSRVHAARRLFEYLSENSLDFPVIHHIEFPKGIHRDDLVIGAGTNAG 600
Query: 600 ALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
ALLVDGLGDG+LLE+P Q+F+FLR+TSFNLLQG C M
Sbjct: 601 ALLVDGLGDGILLESPDQEFEFLRNTSFNLLQG-CRM 636
>gi|449524150|ref|XP_004169086.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 767
Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/635 (85%), Positives = 595/635 (93%), Gaps = 2/635 (0%)
Query: 2 ATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAELQ 61
+ GTLP+ G K + LGF+K ++ V+V D + KS R+ +IRNS N SDIAELQ
Sbjct: 3 SAGTLPSHLSGWKGGNVNLGFSKRLESVKVFDLKSPKSRGRKVLIIRNS-NPGSDIAELQ 61
Query: 62 PASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTV 121
PASEGS LLVPRQKYCESI+KTVRRKTRTVMVGNVA+GSEHPIR+QTMTT DTKDVAGTV
Sbjct: 62 PASEGSSLLVPRQKYCESINKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTV 121
Query: 122 EEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 181
E+VMRIAD+GAD+VRITVQGK+EADACFEIKN+LVQKNYNIPLVADIHFAPSVALRVAEC
Sbjct: 122 EQVMRIADKGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC 181
Query: 182 FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241
FDKIRVNPGNFADRRAQFEQLEYT+++YQKEL+HIEEVF+PLVEKCKKYGRA+RIGTNHG
Sbjct: 182 FDKIRVNPGNFADRRAQFEQLEYTEEDYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNHG 241
Query: 242 SLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMY 301
SLSDRIMSY+GDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPVVMVQAYRLLVAEMY
Sbjct: 242 SLSDRIMSYFGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEMY 301
Query: 302 VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
V GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRLA
Sbjct: 302 VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA 361
Query: 362 NLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSL 421
LGM+AAELQQGV P+EEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVL+SVSL
Sbjct: 362 TLGMKAAELQQGVVPYEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLISVSL 421
Query: 422 DQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVI 481
DQLK PELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDD DARLALKRL+DISMGVI
Sbjct: 422 DQLKMPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDADARLALKRLIDISMGVI 481
Query: 482 TPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATM 541
TPLSEQLTKPLP+AMVLVNL+ELS+GAYKLLP+GTRLVVS+RGDESY +L+ILK+ DATM
Sbjct: 482 TPLSEQLTKPLPNAMVLVNLKELSSGAYKLLPDGTRLVVSVRGDESYNDLDILKETDATM 541
Query: 542 ILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGAL 601
+ HDLP++EDK+ RV AARRLFEYLSEN L FPVIHHIQFPNG+HRDDLVIGAG+N GAL
Sbjct: 542 LFHDLPYSEDKVSRVHAARRLFEYLSENGLTFPVIHHIQFPNGVHRDDLVIGAGSNAGAL 601
Query: 602 LVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LVDGLGDG+LLEAP +DFDF+R+TSFNLLQG C M
Sbjct: 602 LVDGLGDGVLLEAPDKDFDFIRNTSFNLLQG-CRM 635
>gi|449462089|ref|XP_004148774.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 741
Score = 1135 bits (2935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/635 (85%), Positives = 595/635 (93%), Gaps = 2/635 (0%)
Query: 2 ATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAELQ 61
+ GTLP+ G K + LGF+K ++ V+V D + KS R+ +IRNS N SDIAELQ
Sbjct: 3 SAGTLPSHLSGWKGGNVNLGFSKRLESVKVFDLKSPKSRGRKVLIIRNS-NPGSDIAELQ 61
Query: 62 PASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTV 121
PASEGS LLVPRQKYCESI+KTVRRKTRTVMVGNVA+GSEHPIR+QTMTT DTKDVAGTV
Sbjct: 62 PASEGSSLLVPRQKYCESINKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGTV 121
Query: 122 EEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 181
E+VMRIAD+GAD+VRITVQGK+EADACFEIKN+LVQKNYNIPLVADIHFAPSVALRVAEC
Sbjct: 122 EQVMRIADKGADIVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAEC 181
Query: 182 FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241
FDKIRVNPGNFADRRAQFEQLEYT+++YQKEL+HIEEVF+PLVEKCKKYGRA+RIGTNHG
Sbjct: 182 FDKIRVNPGNFADRRAQFEQLEYTEEDYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNHG 241
Query: 242 SLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMY 301
SLSDRIMSY+GDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPVVMVQAYRLLVAEMY
Sbjct: 242 SLSDRIMSYFGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEMY 301
Query: 302 VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
V GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRLA
Sbjct: 302 VQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLA 361
Query: 362 NLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSL 421
LGM+AAELQQGV P+EEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVL+SVSL
Sbjct: 362 TLGMKAAELQQGVVPYEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLISVSL 421
Query: 422 DQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVI 481
DQLK PELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDD DARLALKRL+DISMGVI
Sbjct: 422 DQLKMPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDADARLALKRLIDISMGVI 481
Query: 482 TPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATM 541
TPLSEQLTKPLP+AMVLVNL+ELS+GAYKLLP+GTRLVVS+RGDESY +L+ILK+ DATM
Sbjct: 482 TPLSEQLTKPLPNAMVLVNLKELSSGAYKLLPDGTRLVVSVRGDESYNDLDILKETDATM 541
Query: 542 ILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGAL 601
+ HDLP++EDK+ RV AARRLFEYLSEN L FPVIHHIQFPNG+HRDDLVIGAG+N GAL
Sbjct: 542 LFHDLPYSEDKVSRVHAARRLFEYLSENGLTFPVIHHIQFPNGVHRDDLVIGAGSNAGAL 601
Query: 602 LVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LVDGLGDG+LLEAP +DFDF+R+TSFNLLQG C M
Sbjct: 602 LVDGLGDGVLLEAPDKDFDFIRNTSFNLLQG-CRM 635
>gi|343466209|gb|AEM42998.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Siraitia
grosvenorii]
Length = 740
Score = 1134 bits (2934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/636 (85%), Positives = 593/636 (93%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATGTLP+ GLK + LGFAK ++ V+V D + +S R+ V+RNS N SDIAEL
Sbjct: 1 MATGTLPSHLSGLKGGNVNLGFAKRLELVKVSDLKSVRSRGRKVLVVRNS-NPGSDIAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGS LLVPRQKYCES +KTVRRKTRTVMVGNVA+GSEHPIR+QTMTT DTKDVAGT
Sbjct: 60 QPASEGSSLLVPRQKYCESTNKTVRRKTRTVMVGNVALGSEHPIRIQTMTTTDTKDVAGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VMR+AD+GAD+VRITVQGK+EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMRVADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQF QLEYT+D+YQKEL+HIEEVF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFVQLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSY+GDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPVVMVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYFGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
A LGMRAAELQQGV P+EEKHRHYFDFQRRSGQLP+QKEGEEVDYRG LHRDGSVLMSVS
Sbjct: 360 ATLGMRAAELQQGVVPYEEKHRHYFDFQRRSGQLPVQKEGEEVDYRGALHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLK PELLYK LAAKLVVGMPFKDLATVDSILLRELP VDD DARLALKRL+DISMGV
Sbjct: 420 LDQLKMPELLYKFLAAKLVVGMPFKDLATVDSILLRELPPVDDADARLALKRLIDISMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
ITPLSEQLTKPLP+AMVLVNL+ELS+GA+KLLP+GTRLVVS+RGDESY +LE+LK+IDAT
Sbjct: 480 ITPLSEQLTKPLPNAMVLVNLKELSSGAHKLLPDGTRLVVSVRGDESYNDLEVLKEIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
M+ HDL ++EDK+ RV AARRLFEYL+EN LNFPVIHHIQFP GIHRDDLVIGAG+N GA
Sbjct: 540 MLFHDLSYSEDKVSRVHAARRLFEYLAENALNFPVIHHIQFPKGIHRDDLVIGAGSNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG+LLEAP +DFDFLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGVLLEAPDKDFDFLRNTSFNLLQG-CRM 634
>gi|30697397|ref|NP_200868.2| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
thaliana]
gi|27462472|gb|AAO15446.1|AF434673_1 GcpE [Arabidopsis thaliana]
gi|332009971|gb|AED97354.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Arabidopsis
thaliana]
Length = 740
Score = 1133 bits (2931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/636 (85%), Positives = 592/636 (93%), Gaps = 3/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG LPA G+K DS +GF KS++ VR+CD R +S RRR +VIRNS N SD+AEL
Sbjct: 1 MATGVLPAPVSGIKIPDSKVGFGKSMNLVRICDVRSLRSARRRVSVIRNS-NQGSDLAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCES+HKTVRRKTRTVMVGNVA+GSEHPIR+QTMTT+DTKD+ GT
Sbjct: 60 QPASEGSPLLVPRQKYCESLHKTVRRKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V+EVMRIAD+GAD+VRITVQGK+EADACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VDEVMRIADKGADIVRITVQGKKEADACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFE ++YT+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFETIDYTEDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG +AA+LQQG APFEEKHRHYFDFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+S
Sbjct: 360 ANLGTKAAKLQQG-APFEEKHRHYFDFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSIS 418
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLKAPELLY+SLA KLVVGMPFKDLATVDSILLRELP VDD ARLALKRL+D+SMGV
Sbjct: 419 LDQLKAPELLYRSLATKLVVGMPFKDLATVDSILLRELPPVDDQVARLALKRLIDVSMGV 478
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLVNL+ELS GAYKLLPEGTRLVVSLRGDE YEELEILK+IDAT
Sbjct: 479 IAPLSEQLTKPLPNAMVLVNLKELSGGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDAT 538
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHD+PF EDK+ RV AARRLFE+LSEN++NFPVIHHI FP GIHRD+LVI AGT G
Sbjct: 539 MILHDVPFTEDKVSRVHAARRLFEFLSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGG 598
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG++LEAP QDFDFLR+TSFNLLQG C M
Sbjct: 599 LLVDGLGDGVMLEAPDQDFDFLRNTSFNLLQG-CRM 633
>gi|350539411|ref|NP_001234648.1| GcpE [Solanum lycopersicum]
gi|27462474|gb|AAO15447.1|AF435086_1 GcpE [Solanum lycopersicum]
Length = 740
Score = 1132 bits (2928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/636 (85%), Positives = 595/636 (93%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MA GT+PASF GLKS ++GLGFAKS++F+RV D ++ K R +F+VIRN+ N + EL
Sbjct: 1 MAAGTVPASFTGLKSNENGLGFAKSMNFIRVSDLQRVKFRRTKFSVIRNA-NPGQETIEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGSPLLVPRQKYCESI+KTVRR+T TVMVGNVA+GSEHPIR+QTMTT DTKDVA T
Sbjct: 60 QPASEGSPLLVPRQKYCESIYKTVRRQTCTVMVGNVALGSEHPIRIQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM+IAD GAD+VRITVQG++EADACFEIKN+LVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMKIADAGADIVRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFEQLEYT+D+YQKEL+HIEEVF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEEVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPVVMVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE PE+EIDPCRRL
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEAPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
A+LG RAA LQQGVAPFEEKHR YFDFQRRSG+LP QKEG+EVDYRGVLHRDGSVLMSVS
Sbjct: 360 ADLGKRAAALQQGVAPFEEKHRRYFDFQRRSGELPAQKEGDEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
L+QLK PELLY+SLAAKL+VGMPFKDLATVDSILLRELP +DD D+RLALKRLVDISMGV
Sbjct: 420 LNQLKTPELLYRSLAAKLIVGMPFKDLATVDSILLRELPPLDDIDSRLALKRLVDISMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
I PLSEQLTKPLP+AMVLV L+ELS GA+KLLPEGTRLVVSLRGDES++ELEILK D T
Sbjct: 480 IAPLSEQLTKPLPNAMVLVTLKELSGGAHKLLPEGTRLVVSLRGDESHDELEILKSSDVT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILH+LP+ E+KIGRVQAARRLFEYLSEN+LNFPVIHHIQFP+ HRDDLVIGAGTN GA
Sbjct: 540 MILHNLPYTEEKIGRVQAARRLFEYLSENSLNFPVIHHIQFPSNTHRDDLVIGAGTNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDGLLLEAP +DFDFLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGLLLEAPDKDFDFLRNTSFNLLQG-CRM 634
>gi|357453895|ref|XP_003597228.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Medicago
truncatula]
gi|355486276|gb|AES67479.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Medicago
truncatula]
Length = 767
Score = 1129 bits (2920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/663 (82%), Positives = 600/663 (90%), Gaps = 29/663 (4%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
M GT+PASF L++ DSGLGF KS+DFVRV D ++ KS RR+ ++IRNS N S DIAEL
Sbjct: 1 MVAGTVPASFSSLRTCDSGLGFGKSIDFVRVSDLQRMKSSRRKVSIIRNS-NPSQDIAEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPAS+GS LLVPRQKYCES+HKTVRRKTRTV VG+V IGS+HPIR+QTMTT DTKDVAGT
Sbjct: 60 QPASKGSQLLVPRQKYCESLHKTVRRKTRTVNVGDVTIGSDHPIRIQTMTTTDTKDVAGT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM+IAD+GAD+VRITVQGK+EADACFEIKNSLVQKNYNIPLVADIHFAP+VALRVAE
Sbjct: 120 VEQVMKIADKGADIVRITVQGKKEADACFEIKNSLVQKNYNIPLVADIHFAPTVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEV--------------------- 219
CFDKIRVNPGNFADRRAQFE LEYT+D+YQKEL+HIE+V
Sbjct: 180 CFDKIRVNPGNFADRRAQFEILEYTEDDYQKELEHIEQVKPPPLVLYLKFLSRARICSFV 239
Query: 220 ------FSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD 273
F+PLVEKCKKYGRA+RIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD
Sbjct: 240 NTSVRVFTPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD 299
Query: 274 FHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTL 333
+HNF+FSMKASNPVVMVQAYRLLVAEMYV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTL
Sbjct: 300 YHNFVFSMKASNPVVMVQAYRLLVAEMYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTL 359
Query: 334 LQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQ 393
LQDGLGDTIRVSLTEPPE+EIDPC RLANLG RAAELQ+GVAPFEEKHRHYFDFQRRSGQ
Sbjct: 360 LQDGLGDTIRVSLTEPPEEEIDPCTRLANLGTRAAELQKGVAPFEEKHRHYFDFQRRSGQ 419
Query: 394 LPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSI 453
LP+QKEGEEVDYRG LHRDGSVLMSVSL+QLK PELLYKSL+AKL+VGMPFKDLATVDSI
Sbjct: 420 LPLQKEGEEVDYRGTLHRDGSVLMSVSLEQLKTPELLYKSLSAKLIVGMPFKDLATVDSI 479
Query: 454 LLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLP 513
LLRELP VDD DARLALKRL DISMGVITPLSEQLTKPLP+A+VLVNL+ELSTGA+KLLP
Sbjct: 480 LLRELPPVDDVDARLALKRLNDISMGVITPLSEQLTKPLPNAIVLVNLKELSTGAHKLLP 539
Query: 514 EGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNF 573
+GTRLVVS+RGDE YEELEILKD+DATM+LHDLP+ ED+I RV AARRLFEYLS+N+L+F
Sbjct: 540 QGTRLVVSVRGDEPYEELEILKDVDATMLLHDLPYTEDRISRVHAARRLFEYLSDNSLDF 599
Query: 574 PVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGV 633
PVIHHIQFPNGIHRDDLVIGAG++ GALLVDGLGDGLLLEA +DFDFLR+TSFNLLQG
Sbjct: 600 PVIHHIQFPNGIHRDDLVIGAGSHAGALLVDGLGDGLLLEASDKDFDFLRNTSFNLLQG- 658
Query: 634 CLM 636
C M
Sbjct: 659 CRM 661
>gi|322518146|gb|ADX06907.1| 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate synthase [Rauvolfia
verticillata]
Length = 740
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/636 (84%), Positives = 594/636 (93%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATGT+PASF GLKS ++GLGFAKS+DFVRV D R+ K R + +VI+NS N + EL
Sbjct: 1 MATGTVPASFTGLKSGENGLGFAKSIDFVRVSDLRRVKFLRAKVSVIKNS-NPGPETLEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPASEGS LLVP QKYCES+HKTVRRKTRTVMVG VA+GS+HPIR+QTMTT DTKDVA T
Sbjct: 60 QPASEGSQLLVPVQKYCESVHKTVRRKTRTVMVGKVALGSDHPIRIQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VMRIAD+GAD+VRITVQGK+EADAC++IKN+LVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMRIADKGADIVRITVQGKKEADACYDIKNTLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFEQLEYT++EYQKEL+HIE++F+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEQLEYTNEEYQKELEHIEQIFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSY+GDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MV+AYRLLVAEM
Sbjct: 240 GSLSDRIMSYHGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVEAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+V GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 FVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG RAAELQQGVAPFEEKHR YFDFQRR+G LP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 360 ANLGARAAELQQGVAPFEEKHRRYFDFQRRTGDLPVQKEGEEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLK PELLYKSLAAKLVVGMPFKDLATVDSILLRELP V+D DARLALKRL+DISMGV
Sbjct: 420 LDQLKTPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPVEDQDARLALKRLIDISMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
+TPLSEQLTKPL +A+VLV L+ELS+GA+KLLPEGTRL VS+RGDE EEL+ILK +DAT
Sbjct: 480 VTPLSEQLTKPLLNAIVLVTLKELSSGAHKLLPEGTRLAVSVRGDEPNEELDILKSLDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHDLP E+KIGRV AARRLFEYLSEN+LNFPVIHH+QFP GIHRDDLVI AG+N GA
Sbjct: 540 MILHDLPHTEEKIGRVHAARRLFEYLSENSLNFPVIHHMQFPKGIHRDDLVIRAGSNAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG++LEAP QDF+FLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGVMLEAPDQDFEFLRNTSFNLLQG-CRM 634
>gi|27903511|gb|AAO24774.1| GCPE protein [Catharanthus roseus]
Length = 740
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/636 (84%), Positives = 595/636 (93%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATGT+PASF GLKSR++GLGFAKS+DFV+V D R+ K R + +VI+NS N + EL
Sbjct: 1 MATGTVPASFTGLKSRENGLGFAKSMDFVQVSDLRRVKFRRAKVSVIKNS-NPGPETVEL 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
QPAS+GS LLVP QKYCESIHKTVRRKTRTVMVGNVA+GS+HPIR+QTMTT DTKDVA T
Sbjct: 60 QPASQGSQLLVPVQKYCESIHKTVRRKTRTVMVGNVALGSDHPIRIQTMTTTDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM IAD+GAD+VRITVQGK+EADAC++IKN+LVQK+YNIPLVADIHFAP+VALRVAE
Sbjct: 120 VEQVMGIADKGADIVRITVQGKKEADACYDIKNTLVQKSYNIPLVADIHFAPAVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFEQLEYTD+EYQKEL+HIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEQLEYTDEEYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MV AYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVAAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 300 YVLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLG RAA+L QGVAPFEEKHR YFDFQRR+G LP+QKEGEEVDYRGVLHRDGSVLMSVS
Sbjct: 360 ANLGARAADLGQGVAPFEEKHRRYFDFQRRTGDLPVQKEGEEVDYRGVLHRDGSVLMSVS 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
LDQLK PELLYKSLAAKLVVGMPFKDLATVDSILLRELP ++D D+RLALKRL+DISMGV
Sbjct: 420 LDQLKTPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPIEDKDSRLALKRLIDISMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
ITPLSEQLTKPLP+AMVLV L+ELS+GA+KLLPEGTRLVVS+RGDE YEEL+ILK++D T
Sbjct: 480 ITPLSEQLTKPLPNAMVLVTLKELSSGAHKLLPEGTRLVVSVRGDEPYEELDILKNVDVT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILH+LP E+KIGRV AARRLFEYLSEN+LNFPVIHH+QF N IHRDDLVIGAG++ GA
Sbjct: 540 MILHNLPHTEEKIGRVHAARRLFEYLSENSLNFPVIHHMQFANAIHRDDLVIGAGSDAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG++LEA QDF+FLR+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGVMLEAHDQDFEFLRNTSFNLLQG-CRM 634
>gi|112258871|gb|ABG75916.2| (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Stevia
rebaudiana]
Length = 740
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/636 (84%), Positives = 589/636 (92%), Gaps = 2/636 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAEL 60
MATG P SF LK R++GLGFAK+ DFV+V D ++ K R + V +NS S SDIAE
Sbjct: 1 MATGAAPTSFMSLKGRENGLGFAKTSDFVKVSDLKRVKFHRTKIFVPKNS-KSGSDIAEF 59
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
+PASEGSPLLVP QKYCES HKT+RRKTRTVMVG+VA+GS+HPIR+QTMTT+DTKDVA T
Sbjct: 60 KPASEGSPLLVPVQKYCESTHKTLRRKTRTVMVGDVALGSDHPIRIQTMTTSDTKDVAAT 119
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
VE+VM+IAD+GADLVRITVQGKREADACFEIKN+LVQKNYNIPLVADIHFAPSVALRVAE
Sbjct: 120 VEQVMQIADRGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAE 179
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFEQLEYTDD+YQKEL+HIE+VF PLVEKCKKYGRA+RIGTNH
Sbjct: 180 CFDKIRVNPGNFADRRAQFEQLEYTDDDYQKELEHIEKVFVPLVEKCKKYGRAMRIGTNH 239
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MVQAYRLLVAEM
Sbjct: 240 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAEM 299
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCR+L
Sbjct: 300 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRKL 359
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS 420
ANLGM+A+++QQGVAPFEEKHR YFDFQRR+G LP+QKEGEEVDYRGVLHRDGSV MSV+
Sbjct: 360 ANLGMKASQIQQGVAPFEEKHRRYFDFQRRTGDLPVQKEGEEVDYRGVLHRDGSVPMSVT 419
Query: 421 LDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGV 480
L+QLK PEL YKSLAAKLV+GMPFKDLATVDSI LRELP VDD DARLALKRL+D+SMGV
Sbjct: 420 LEQLKKPELFYKSLAAKLVLGMPFKDLATVDSIFLRELPPVDDKDARLALKRLIDVSMGV 479
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDAT 540
ITPLSEQLTKPLP+A+VLVNL ELSTGA+KLLPEGTRLVVSLRGDE YEELE+LK IDAT
Sbjct: 480 ITPLSEQLTKPLPNAIVLVNLNELSTGAHKLLPEGTRLVVSLRGDEPYEELEVLKSIDAT 539
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
MILHDLP++E+K GRV AARRLFEYLSEN+LNFPV+HHI FP G+ RD+LVI AG N GA
Sbjct: 540 MILHDLPYSEEKTGRVHAARRLFEYLSENSLNFPVLHHITFPKGVPRDELVINAGANAGA 599
Query: 601 LLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLVDGLGDG+LL+AP QDF+F+R+TSFNLLQG C M
Sbjct: 600 LLVDGLGDGILLDAPDQDFEFIRNTSFNLLQG-CRM 634
>gi|9759324|dbj|BAB09833.1| GcpE protein [Arabidopsis thaliana]
Length = 716
Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/611 (86%), Positives = 576/611 (94%), Gaps = 2/611 (0%)
Query: 26 VDFVRVCDFRKFKSGRRRFTVIRNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVR 85
++ VR+CD R +S RRR +VIRNS N SD+AELQPASEGSPLLVPRQKYCES+HKTVR
Sbjct: 1 MNLVRICDVRSLRSARRRVSVIRNS-NQGSDLAELQPASEGSPLLVPRQKYCESLHKTVR 59
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
RKTRTVMVGNVA+GSEHPIR+QTMTT+DTKD+ GTV+EVMRIAD+GAD+VRITVQGK+EA
Sbjct: 60 RKTRTVMVGNVALGSEHPIRIQTMTTSDTKDITGTVDEVMRIADKGADIVRITVQGKKEA 119
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYT 205
DACFEIK+ LVQ NYNIPLVADIHFAP+VALRVAECFDKIRVNPGNFADRRAQFE ++YT
Sbjct: 120 DACFEIKDKLVQLNYNIPLVADIHFAPTVALRVAECFDKIRVNPGNFADRRAQFETIDYT 179
Query: 206 DDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 265
+DEYQKELQHIE+VF+PLVEKCKKYGRA+RIGTNHGSLSDRIMSYYGDSPRGMVESAFEF
Sbjct: 180 EDEYQKELQHIEQVFTPLVEKCKKYGRAMRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 239
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
ARICRKLD+HNF+FSMKASNPV+MVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK
Sbjct: 240 ARICRKLDYHNFVFSMKASNPVIMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 299
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYF 385
SAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRLANLG +AA+LQQGVAPFEEKHRHYF
Sbjct: 300 SAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRLANLGTKAAKLQQGVAPFEEKHRHYF 359
Query: 386 DFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFK 445
DFQRR+G LP+QKEGEEVDYR VLHRDGSVLMS+SLDQLKAPELLY+SLA KLVVGMPFK
Sbjct: 360 DFQRRTGDLPVQKEGEEVDYRNVLHRDGSVLMSISLDQLKAPELLYRSLATKLVVGMPFK 419
Query: 446 DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELS 505
DLATVDSILLRELP VDD ARLALKRL+D+SMGVI PLSEQLTKPLP+AMVLVNL+ELS
Sbjct: 420 DLATVDSILLRELPPVDDQVARLALKRLIDVSMGVIAPLSEQLTKPLPNAMVLVNLKELS 479
Query: 506 TGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEY 565
GAYKLLPEGTRLVVSLRGDE YEELEILK+IDATMILHD+PF EDK+ RV AARRLFE+
Sbjct: 480 GGAYKLLPEGTRLVVSLRGDEPYEELEILKNIDATMILHDVPFTEDKVSRVHAARRLFEF 539
Query: 566 LSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDT 625
LSEN++NFPVIHHI FP GIHRD+LVI AGT G LLVDGLGDG++LEAP QDFDFLR+T
Sbjct: 540 LSENSVNFPVIHHINFPTGIHRDELVIHAGTYAGGLLVDGLGDGVMLEAPDQDFDFLRNT 599
Query: 626 SFNLLQGVCLM 636
SFNLLQG C M
Sbjct: 600 SFNLLQG-CRM 609
>gi|357453897|ref|XP_003597229.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Medicago
truncatula]
gi|355486277|gb|AES67480.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Medicago
truncatula]
Length = 731
Score = 1082 bits (2797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/627 (84%), Positives = 572/627 (91%), Gaps = 29/627 (4%)
Query: 37 FKSGRRRFTVIRNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNV 96
KS RR+ ++IRNS N S DIAELQPAS+GS LLVPRQKYCES+HKTVRRKTRTV VG+V
Sbjct: 1 MKSSRRKVSIIRNS-NPSQDIAELQPASKGSQLLVPRQKYCESLHKTVRRKTRTVNVGDV 59
Query: 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLV 156
IGS+HPIR+QTMTT DTKDVAGTVE+VM+IAD+GAD+VRITVQGK+EADACFEIKNSLV
Sbjct: 60 TIGSDHPIRIQTMTTTDTKDVAGTVEQVMKIADKGADIVRITVQGKKEADACFEIKNSLV 119
Query: 157 QKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHI 216
QKNYNIPLVADIHFAP+VALRVAECFDKIRVNPGNFADRRAQFE LEYT+D+YQKEL+HI
Sbjct: 120 QKNYNIPLVADIHFAPTVALRVAECFDKIRVNPGNFADRRAQFEILEYTEDDYQKELEHI 179
Query: 217 EEV---------------------------FSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
E+V F+PLVEKCKKYGRA+RIGTNHGSLSDRIMS
Sbjct: 180 EQVKPPPLVLYLKFLSRARICSFVNTSVRVFTPLVEKCKKYGRAMRIGTNHGSLSDRIMS 239
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPL 309
YYGDSPRGMVESAFEFARICRKLD+HNF+FSMKASNPVVMVQAYRLLVAEMYV GWDYPL
Sbjct: 240 YYGDSPRGMVESAFEFARICRKLDYHNFVFSMKASNPVVMVQAYRLLVAEMYVQGWDYPL 299
Query: 310 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE 369
HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPC RLANLG RAAE
Sbjct: 300 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCTRLANLGTRAAE 359
Query: 370 LQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
LQ+GVAPFEEKHRHYFDFQRRSGQLP+QKEGEEVDYRG LHRDGSVLMSVSL+QLK PEL
Sbjct: 360 LQKGVAPFEEKHRHYFDFQRRSGQLPLQKEGEEVDYRGTLHRDGSVLMSVSLEQLKTPEL 419
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
LYKSL+AKL+VGMPFKDLATVDSILLRELP VDD DARLALKRL DISMGVITPLSEQLT
Sbjct: 420 LYKSLSAKLIVGMPFKDLATVDSILLRELPPVDDVDARLALKRLNDISMGVITPLSEQLT 479
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFN 549
KPLP+A+VLVNL+ELSTGA+KLLP+GTRLVVS+RGDE YEELEILKD+DATM+LHDLP+
Sbjct: 480 KPLPNAIVLVNLKELSTGAHKLLPQGTRLVVSVRGDEPYEELEILKDVDATMLLHDLPYT 539
Query: 550 EDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDG 609
ED+I RV AARRLFEYLS+N+L+FPVIHHIQFPNGIHRDDLVIGAG++ GALLVDGLGDG
Sbjct: 540 EDRISRVHAARRLFEYLSDNSLDFPVIHHIQFPNGIHRDDLVIGAGSHAGALLVDGLGDG 599
Query: 610 LLLEAPGQDFDFLRDTSFNLLQGVCLM 636
LLLEA +DFDFLR+TSFNLLQG C M
Sbjct: 600 LLLEASDKDFDFLRNTSFNLLQG-CRM 625
>gi|82492440|gb|ABB78087.1| (E)-4-hydroxy-3-methyl-but-2-enyl diphosphate synthase [Ginkgo
biloba]
Length = 741
Score = 1081 bits (2796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/639 (81%), Positives = 582/639 (91%), Gaps = 7/639 (1%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFV---RVCDFRKFKSGRRRFTVIRNSSNSSSDI 57
MA GT+PASF GLK DS G + ++ R+ + + +S R+R V+RNSS SDI
Sbjct: 1 MAAGTIPASFSGLKQTDSLPGCLEKINSTKNFRISNCQTSRSCRKRLNVVRNSS---SDI 57
Query: 58 AELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDV 117
AE+Q ASEGSPLLVPRQKYCESI+KTVRR+TRT+M GNVA+GSEHPIR+QTMTT DTKDV
Sbjct: 58 AEMQRASEGSPLLVPRQKYCESIYKTVRRRTRTMMAGNVALGSEHPIRIQTMTTTDTKDV 117
Query: 118 AGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALR 177
+ TVE+VMRIAD+GADLVRITVQGK+EADAC++IKN+LVQK+YNIPLVADIHFAPSVA+R
Sbjct: 118 SATVEQVMRIADRGADLVRITVQGKKEADACYDIKNTLVQKDYNIPLVADIHFAPSVAMR 177
Query: 178 VAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237
VAECFDKIRVNPGNFADRRAQF++LEYT+++YQKEL+HIEEVF PLVEKCKKYGRA+RIG
Sbjct: 178 VAECFDKIRVNPGNFADRRAQFQKLEYTEEDYQKELEHIEEVFGPLVEKCKKYGRAMRIG 237
Query: 238 TNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLV 297
TNHGSLSDRIMSYYGDSPRGMVESAFEFARIC+KLDFHNF+FSMKASNPVVMVQAYRLLV
Sbjct: 238 TNHGSLSDRIMSYYGDSPRGMVESAFEFARICQKLDFHNFVFSMKASNPVVMVQAYRLLV 297
Query: 298 AEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
AEMYV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPC
Sbjct: 298 AEMYVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPC 357
Query: 358 RRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLM 417
RRLANLGM+AA+LQ+GVAPFEEKHR+YFDFQRR+GQLP+QKEGEEVDYRGVLHRDGSVLM
Sbjct: 358 RRLANLGMQAAKLQKGVAPFEEKHRYYFDFQRRTGQLPVQKEGEEVDYRGVLHRDGSVLM 417
Query: 418 SVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDIS 477
SVSLDQLK PELLYKSLA KL+VGMPFKDLATVD+ILLRELP VDD +ARLA+KRLVD+S
Sbjct: 418 SVSLDQLKTPELLYKSLATKLIVGMPFKDLATVDTILLRELPPVDDSEARLAIKRLVDVS 477
Query: 478 MGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDI 537
MGV+TPLSEQLT+PL HAMVLVNL+ELSTGA++LLP GTRL VSLRGDE+YE+L++LK +
Sbjct: 478 MGVLTPLSEQLTRPLQHAMVLVNLKELSTGAHELLPAGTRLAVSLRGDEAYEDLDLLKSV 537
Query: 538 DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
D TMIL +LP E KI RV A+RRLFEYL E LNFPVIHH++FP G HRDDLVI AG+
Sbjct: 538 DLTMILLNLPQTEKKISRVHASRRLFEYLQETGLNFPVIHHLEFPAGTHRDDLVINAGSE 597
Query: 598 VGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
GALLVDGLGDGLLLEAP QDFDFLR+TSF LLQG C M
Sbjct: 598 AGALLVDGLGDGLLLEAPDQDFDFLRNTSFGLLQG-CRM 635
>gi|189017048|gb|ACD70401.1| putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase [Populus trichocarpa]
Length = 680
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/574 (90%), Positives = 553/574 (96%), Gaps = 1/574 (0%)
Query: 63 ASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVE 122
ASEGS LLVPRQKYCESI+KTVRRKTRTVMVGNV +GSEHPIR+QTMTT DTKDVA TVE
Sbjct: 1 ASEGSSLLVPRQKYCESINKTVRRKTRTVMVGNVPLGSEHPIRIQTMTTTDTKDVAATVE 60
Query: 123 EVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECF 182
+VM IAD+GAD+VR+TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV+ECF
Sbjct: 61 QVMIIADKGADIVRLTVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVSECF 120
Query: 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
DKIRVNPGNFADRRAQFE+LEYTDD+YQKEL+HIE+VF+PLVEKCKKYGRA+RIGTNHGS
Sbjct: 121 DKIRVNPGNFADRRAQFEKLEYTDDDYQKELEHIEKVFTPLVEKCKKYGRAMRIGTNHGS 180
Query: 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPVVMVQAYRLLVAEMYV
Sbjct: 181 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVVMVQAYRLLVAEMYV 240
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCR+LAN
Sbjct: 241 QGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRKLAN 300
Query: 363 LGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLD 422
LGMRAA++QQGVAPF+EK+R YFDFQRRSGQLP+QKEGEEVDYRGVLHRDGSVLMSVSLD
Sbjct: 301 LGMRAAKIQQGVAPFKEKYRRYFDFQRRSGQLPMQKEGEEVDYRGVLHRDGSVLMSVSLD 360
Query: 423 QLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVIT 482
QLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELP VDD+D RLALKRL+++SMGVI
Sbjct: 361 QLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPPVDDNDVRLALKRLIEVSMGVIA 420
Query: 483 PLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMI 542
PLSEQLTKPLP+AMVLVNL+ELSTGAYKLLPEGTRLVVSLRGDE YEELEILK IDATM+
Sbjct: 421 PLSEQLTKPLPNAMVLVNLKELSTGAYKLLPEGTRLVVSLRGDEPYEELEILKHIDATML 480
Query: 543 LHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALL 602
LHDLPF+EDKIGRV ARRLFEYL+EN LN PVIHH+QFP GIHRD+LVIGAGTN GALL
Sbjct: 481 LHDLPFSEDKIGRVHTARRLFEYLAENALNVPVIHHLQFPKGIHRDELVIGAGTNAGALL 540
Query: 603 VDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
VDGLGDG+L+EAP QDFDFLR+TSFNLLQG C M
Sbjct: 541 VDGLGDGVLIEAPDQDFDFLRNTSFNLLQG-CRM 573
>gi|115447171|ref|NP_001047365.1| Os02g0603800 [Oryza sativa Japonica Group]
gi|75261413|sp|Q6K8J4.1|ISPG_ORYSJ RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
chloroplastic; AltName:
Full=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase; Flags: Precursor
gi|47497312|dbj|BAD19354.1| putative GCPE protein [Oryza sativa Japonica Group]
gi|113536896|dbj|BAF09279.1| Os02g0603800 [Oryza sativa Japonica Group]
gi|215767934|dbj|BAH00163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218191125|gb|EEC73552.1| hypothetical protein OsI_07973 [Oryza sativa Indica Group]
gi|222623195|gb|EEE57327.1| hypothetical protein OsJ_07430 [Oryza sativa Japonica Group]
Length = 744
Score = 1075 bits (2780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/640 (81%), Positives = 578/640 (90%), Gaps = 6/640 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFR---KFKSGRRRFTVIRNSSNSSSDI 57
MATG PA P ++ RD G+GF +SVDF ++ + S R R V ++SS + SD
Sbjct: 1 MATGVAPAPLPHVRVRDGGIGFTRSVDFAKILSVPATLRVGSSRGRVLVAKSSS-TGSDT 59
Query: 58 AELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDV 117
EL+P+SEGSPLLVPRQKYCESI++T RRKTRTVMVGNV +GS+HPIR+QTMTT+DTKDV
Sbjct: 60 MELEPSSEGSPLLVPRQKYCESIYETRRRKTRTVMVGNVPLGSDHPIRIQTMTTSDTKDV 119
Query: 118 AGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALR 177
A TVEEVMRIAD+GAD VRITVQG++EADACFEIKN+LVQKNYNIPLVADIHFAP+VALR
Sbjct: 120 AKTVEEVMRIADKGADFVRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHFAPTVALR 179
Query: 178 VAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237
VAECFDKIRVNPGNFADRRAQFEQLEYT+D+YQKEL+HIE+VFSPLVEKCK+YGRA+RIG
Sbjct: 180 VAECFDKIRVNPGNFADRRAQFEQLEYTEDDYQKELEHIEKVFSPLVEKCKQYGRAMRIG 239
Query: 238 TNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLV 297
TNHGSLSDRIMSYYGDSPRGMVESA EFARICRKLDFHNF+FSMKASNPV+MVQAYRLLV
Sbjct: 240 TNHGSLSDRIMSYYGDSPRGMVESALEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLV 299
Query: 298 AEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
AEMY GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EIDPC
Sbjct: 300 AEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDPC 359
Query: 358 RRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLM 417
RRLANLG AA+LQ GVAPFEEKHR YFDFQRRSGQLP+QKEGEEVDYRGVLHRDGSVLM
Sbjct: 360 RRLANLGTHAADLQIGVAPFEEKHRRYFDFQRRSGQLPLQKEGEEVDYRGVLHRDGSVLM 419
Query: 418 SVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDIS 477
SVSLDQLKAPELLY+SLAAKLVVGMPFKDLATVDSILLRELP V+D ARLALKRLVDIS
Sbjct: 420 SVSLDQLKAPELLYRSLAAKLVVGMPFKDLATVDSILLRELPPVEDAQARLALKRLVDIS 479
Query: 478 MGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDI 537
MGV+TPLSEQLTKPLPHA+ LVN+ ELS+GA+KLLPEGTRL V+LRGDESYE+L++LK +
Sbjct: 480 MGVLTPLSEQLTKPLPHAIALVNVDELSSGAHKLLPEGTRLAVTLRGDESYEQLDLLKGV 539
Query: 538 -DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGT 596
D TM+LH +P+ E+K GRV AARRLFEYL N LNFPVIHHI+FP ++RDDLVIGAG
Sbjct: 540 DDITMLLHSVPYGEEKTGRVHAARRLFEYLETNGLNFPVIHHIEFPKSVNRDDLVIGAGA 599
Query: 597 NVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
NVGALLVDGLGDG+LLEA Q+F+FLRDTSFNLLQG C M
Sbjct: 600 NVGALLVDGLGDGVLLEAADQEFEFLRDTSFNLLQG-CRM 638
>gi|242065696|ref|XP_002454137.1| hypothetical protein SORBIDRAFT_04g025290 [Sorghum bicolor]
gi|241933968|gb|EES07113.1| hypothetical protein SORBIDRAFT_04g025290 [Sorghum bicolor]
Length = 746
Score = 1073 bits (2774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/641 (81%), Positives = 578/641 (90%), Gaps = 6/641 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGR----RRFTVIRNSSNSSSD 56
MATG PAS P ++ RD G+GF +SVDF +V + R R ++ SS++ S+
Sbjct: 1 MATGVAPASLPHVRVRDGGVGFTRSVDFAKVLSTPSAGTMRTSSSRGRALVAKSSSTGSE 60
Query: 57 IAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKD 116
EL+P+SEGSPLLVPRQKYCESIH+T RRKTRTVMVGNV +GS+HPIR+QTMTT+DTKD
Sbjct: 61 TVELEPSSEGSPLLVPRQKYCESIHQTRRRKTRTVMVGNVPLGSDHPIRIQTMTTSDTKD 120
Query: 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL 176
VA TVEEVMRIAD+GAD+VRITVQG++EADACFEIK++LVQKNYNIPLVADIHFAP+VAL
Sbjct: 121 VAKTVEEVMRIADKGADIVRITVQGRKEADACFEIKDTLVQKNYNIPLVADIHFAPTVAL 180
Query: 177 RVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236
RVAECFDKIRVNPGNFADRRAQFE+LEYTDD+YQKEL+HIE+VFSPLVEKCK+YGRA+RI
Sbjct: 181 RVAECFDKIRVNPGNFADRRAQFEKLEYTDDDYQKELEHIEKVFSPLVEKCKQYGRAMRI 240
Query: 237 GTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLL 296
GTNHGSLSDRIMSYYGDSPRGMVESA EFARICRKLD+HNF+FSMKASNPVVMVQAYRLL
Sbjct: 241 GTNHGSLSDRIMSYYGDSPRGMVESALEFARICRKLDYHNFVFSMKASNPVVMVQAYRLL 300
Query: 297 VAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDP 356
VAEMY GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EIDP
Sbjct: 301 VAEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDP 360
Query: 357 CRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVL 416
C+RLANLG +AA LQ GVAPFEEKHR YFDFQRRSGQLP+QKEGEEVDYR VLHRDGSVL
Sbjct: 361 CQRLANLGAQAANLQIGVAPFEEKHRRYFDFQRRSGQLPLQKEGEEVDYRNVLHRDGSVL 420
Query: 417 MSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDI 476
MSVSLDQLKAPELLY+SLAAKLVVGMPFKDLATVDSILLRELP V+D +ARLALKRLVDI
Sbjct: 421 MSVSLDQLKAPELLYRSLAAKLVVGMPFKDLATVDSILLRELPPVEDAEARLALKRLVDI 480
Query: 477 SMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKD 536
MGV+TPLSEQLTKPLPHA+VLVNL ELS+GA+KLLPEGTRL V+LRGDESYE+L+ILKD
Sbjct: 481 GMGVLTPLSEQLTKPLPHAIVLVNLDELSSGAHKLLPEGTRLAVTLRGDESYEQLDILKD 540
Query: 537 I-DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
+ D TM+LH++P+ E+K GRV AARRLFEYL + LNFPVIHHI FP I RD LVIGAG
Sbjct: 541 VDDITMLLHNVPYGEEKTGRVHAARRLFEYLQASGLNFPVIHHIDFPKAIDRDGLVIGAG 600
Query: 596 TNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
NVGALLVDGLGDG+LLEA Q+F+FLRDTSFNLLQG C M
Sbjct: 601 ANVGALLVDGLGDGVLLEAADQEFEFLRDTSFNLLQG-CRM 640
>gi|357150005|ref|XP_003575307.1| PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase-like [Brachypodium distachyon]
Length = 744
Score = 1068 bits (2762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/640 (81%), Positives = 572/640 (89%), Gaps = 6/640 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFR---KFKSGRRRFTVIRNSSNSSSDI 57
MATG PA P ++ RD G+GF +SVDF +V + S R R V+R+SS + SD
Sbjct: 1 MATGVAPAPLPHVRVRDGGIGFTRSVDFAKVLSVPAVLRTGSSRGRGLVVRSSS-TESDT 59
Query: 58 AELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDV 117
EL+PASEGSPLLVPRQKYCESIH+T RRKTRTVMVGNVA+GS+HPIR+QTMTT+DTKDV
Sbjct: 60 IELEPASEGSPLLVPRQKYCESIHQTRRRKTRTVMVGNVAMGSDHPIRIQTMTTSDTKDV 119
Query: 118 AGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALR 177
TVEEVMRIAD+GAD VRITVQGK+EADACFEIKN+LVQKNYNIPLVADIHFAP+VALR
Sbjct: 120 TKTVEEVMRIADKGADFVRITVQGKKEADACFEIKNTLVQKNYNIPLVADIHFAPAVALR 179
Query: 178 VAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237
VAECFDKIRVNPGNFADRRAQFE+LEYT+D+Y+KEL+HIE+VFSPLVEKCKKYGRA+RIG
Sbjct: 180 VAECFDKIRVNPGNFADRRAQFEKLEYTEDDYEKELEHIEKVFSPLVEKCKKYGRAMRIG 239
Query: 238 TNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLV 297
TNHGSLSDRIMSYYGDSPRGMVESA EFARICR LDFHNF+FSMKASNPVVMVQAYRLLV
Sbjct: 240 TNHGSLSDRIMSYYGDSPRGMVESALEFARICRNLDFHNFVFSMKASNPVVMVQAYRLLV 299
Query: 298 AEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
AEMY GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EIDPC
Sbjct: 300 AEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDPC 359
Query: 358 RRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLM 417
RRLANLG +AA LQ GVAPFEEKHR YFDFQRRSGQLP+QKEGE VDYRGVLHRDGSVLM
Sbjct: 360 RRLANLGTQAANLQIGVAPFEEKHRRYFDFQRRSGQLPLQKEGETVDYRGVLHRDGSVLM 419
Query: 418 SVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDIS 477
SVSLDQLKAPELLY+SL+AKLVVGMPFKDLATVDSILLRELP V+D ARLALKRLVDIS
Sbjct: 420 SVSLDQLKAPELLYRSLSAKLVVGMPFKDLATVDSILLRELPPVEDAQARLALKRLVDIS 479
Query: 478 MGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDI 537
MGV+TPLSEQLTKPLPHA+VL+NL ELS+ A LLPEGTR V+LRGDESYE+L +LK +
Sbjct: 480 MGVLTPLSEQLTKPLPHAIVLLNLDELSSDAKNLLPEGTRFAVTLRGDESYEQLNVLKSV 539
Query: 538 -DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGT 596
D TM+LH++P+ E+K GRV AARRLFEYL N LNFPVIHHI FP I RD LVIGAG+
Sbjct: 540 DDITMLLHNVPYGEEKTGRVHAARRLFEYLETNGLNFPVIHHIDFPKSIDRDGLVIGAGS 599
Query: 597 NVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
NVGALLVDGLGDG+LLEA Q+F+FLRDTSFNLLQG C M
Sbjct: 600 NVGALLVDGLGDGVLLEATNQEFEFLRDTSFNLLQG-CRM 638
>gi|219886555|gb|ACL53652.1| unknown [Zea mays]
gi|413937662|gb|AFW72213.1| hydroxymethylbutenyl 4-diphosphate synthase [Zea mays]
Length = 746
Score = 1065 bits (2755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/642 (80%), Positives = 574/642 (89%), Gaps = 8/642 (1%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRV-----CDFRKFKSGRRRFTVIRNSSNSSS 55
MATG PA P ++ G+GF +SVDF +V + S R R ++ SS++ S
Sbjct: 1 MATGVAPAPLPHVRVHHGGVGFTRSVDFAKVLSAPGAGTMRASSSRGR-ALVAKSSSTGS 59
Query: 56 DIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTK 115
+ EL+P+SEGSPLLVPRQKYCES H+T RRKTRTVMVGNV +GS+HPIR+QTMTT+DTK
Sbjct: 60 ETMELEPSSEGSPLLVPRQKYCESTHQTRRRKTRTVMVGNVPLGSDHPIRIQTMTTSDTK 119
Query: 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVA 175
DVA TVEEVMRIAD+GADLVRITVQG++EADACFEIKN+LVQKNYNIPLVADIHFAP+VA
Sbjct: 120 DVAKTVEEVMRIADKGADLVRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHFAPTVA 179
Query: 176 LRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235
LRVAECFDKIRVNPGNFADRRAQFE+LEYTDD+YQKEL+HIE+VFSPLVEKCK+YGRA+R
Sbjct: 180 LRVAECFDKIRVNPGNFADRRAQFEKLEYTDDDYQKELEHIEKVFSPLVEKCKQYGRAMR 239
Query: 236 IGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRL 295
IGTNHGSLSDRIMSYYGDSPRGMVESA EFARICRKLDFHNF+FSMKASNPV+MVQAYRL
Sbjct: 240 IGTNHGSLSDRIMSYYGDSPRGMVESALEFARICRKLDFHNFVFSMKASNPVIMVQAYRL 299
Query: 296 LVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID 355
LVAEMY GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EID
Sbjct: 300 LVAEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEID 359
Query: 356 PCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSV 415
PC+RLANLG +AA LQ GVAPFEEKHR YFDFQRRSGQLP+QKEGEEVDYR VLHRDGSV
Sbjct: 360 PCQRLANLGTQAANLQIGVAPFEEKHRRYFDFQRRSGQLPLQKEGEEVDYRNVLHRDGSV 419
Query: 416 LMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVD 475
LMSVSLDQLKAP+LLY+SLAAKLVVGMPFKDLATVDSILLRELP V+D +ARLALKRLVD
Sbjct: 420 LMSVSLDQLKAPDLLYRSLAAKLVVGMPFKDLATVDSILLRELPPVEDAEARLALKRLVD 479
Query: 476 ISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILK 535
ISMGV+ PLSEQLTKPLPHA+VLVNL ELS+GA+KLLPEGTRL V+LRGDESYE+L+ILK
Sbjct: 480 ISMGVLAPLSEQLTKPLPHAIVLVNLDELSSGAHKLLPEGTRLAVTLRGDESYEQLDILK 539
Query: 536 DI-DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGA 594
D+ D TM+LH++P+ E+K GRV AARRLFEYL N LNFPVIHHI FP I RD LVIGA
Sbjct: 540 DVDDITMLLHNVPYGEEKTGRVHAARRLFEYLQANGLNFPVIHHINFPETIDRDGLVIGA 599
Query: 595 GTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
G NVGALLVDGLGDG+ LEA Q+F+FLRDTSFNLLQG C M
Sbjct: 600 GANVGALLVDGLGDGVFLEAADQEFEFLRDTSFNLLQG-CRM 640
>gi|162458306|ref|NP_001105676.1| LOC542690 [Zea mays]
gi|50082771|gb|AAT70081.1| hydroxymethylbutenyl 4-diphosphate synthase [Zea mays]
gi|50082773|gb|AAT70082.1| hydroxymethylbutenyl 4-diphosphate synthase [Zea mays]
Length = 746
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/641 (80%), Positives = 572/641 (89%), Gaps = 6/641 (0%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRVCDFRKFKSGR----RRFTVIRNSSNSSSD 56
MATG PA P ++ G+GF +SVDF +V + R R ++ SS++ S+
Sbjct: 1 MATGVAPAPLPHVRVHHGGVGFTRSVDFAKVLSAPGAGTMRAGSSRGRALVAKSSSTGSE 60
Query: 57 IAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKD 116
EL+P+SEGSPLLVPRQKYCES H+T RRKTRTVMVGNV +GS+HPIR+QTMTT+DTKD
Sbjct: 61 TMELEPSSEGSPLLVPRQKYCESTHQTRRRKTRTVMVGNVPLGSDHPIRIQTMTTSDTKD 120
Query: 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL 176
VA TVEEVMRIAD+GADLVRITVQG++EADACFEIKN+LVQKNYNIPLVADIHFAP+VAL
Sbjct: 121 VAKTVEEVMRIADKGADLVRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHFAPTVAL 180
Query: 177 RVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236
RVAECFDKIRVNPGNFADRRAQFE+LEYTDD+YQKEL+HIE+VFSPLVEKCK+YGRA+RI
Sbjct: 181 RVAECFDKIRVNPGNFADRRAQFEKLEYTDDDYQKELEHIEKVFSPLVEKCKQYGRAMRI 240
Query: 237 GTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLL 296
GTN GSLSDRIMSYYGDSPRGMVESA EFARICR+LDFHNF+FSMKASNPV+MVQAYRLL
Sbjct: 241 GTNSGSLSDRIMSYYGDSPRGMVESALEFARICRRLDFHNFVFSMKASNPVIMVQAYRLL 300
Query: 297 VAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDP 356
VAEMY GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EIDP
Sbjct: 301 VAEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDP 360
Query: 357 CRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVL 416
C+RLANLG +AA LQ GVAPFEEKHR YFDFQRRSGQLP+QKEGEEVDYR VLHRDGSVL
Sbjct: 361 CQRLANLGTQAANLQIGVAPFEEKHRRYFDFQRRSGQLPLQKEGEEVDYRNVLHRDGSVL 420
Query: 417 MSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDI 476
MSVSLDQLKAP+LLY+SLAAKLVVGMPFKDLATVDSILLRELP V+D +ARLALKRLVDI
Sbjct: 421 MSVSLDQLKAPDLLYRSLAAKLVVGMPFKDLATVDSILLRELPPVEDAEARLALKRLVDI 480
Query: 477 SMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKD 536
S+GV+ PLSEQLTKPLPHA+VLVNL ELS+GA+KLLPEGTRL V+LRGDESYE+L+ILKD
Sbjct: 481 SVGVLAPLSEQLTKPLPHAIVLVNLDELSSGAHKLLPEGTRLAVTLRGDESYEQLDILKD 540
Query: 537 I-DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
+ D TM+LH++P+ E+K GRV AARRLFEYL N LNFPVIHHI FP I RD LVIGAG
Sbjct: 541 VDDITMLLHNVPYGEEKTGRVHAARRLFEYLQANGLNFPVIHHINFPETIDRDGLVIGAG 600
Query: 596 TNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
NVGALLVDGLGDG+ LEA Q+F+FLRDTSFNLLQG C M
Sbjct: 601 ANVGALLVDGLGDGVFLEAADQEFEFLRDTSFNLLQG-CRM 640
>gi|195655961|gb|ACG47448.1| hydroxymethylbutenyl 4-diphosphate synthase [Zea mays]
Length = 745
Score = 1048 bits (2711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/642 (80%), Positives = 570/642 (88%), Gaps = 9/642 (1%)
Query: 1 MATGTLPASFPGLKSRDSGLGFAKSVDFVRV-----CDFRKFKSGRRRFTVIRNSSNSSS 55
MATG PA P ++ G+GF +SVDF +V + S R R ++ SS++ S
Sbjct: 1 MATGVAPAPLPHVRVHHGGVGFTRSVDFAKVLSAPGAGTMRASSSRGR-ALVAKSSSTGS 59
Query: 56 DIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTK 115
+ EL+P+SEGSPLLVPRQKYCES H+T RRKTRTVMVGNV +GS+HPIR+QTMTT+DTK
Sbjct: 60 ETMELEPSSEGSPLLVPRQKYCESTHQTRRRKTRTVMVGNVPLGSDHPIRIQTMTTSDTK 119
Query: 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVA 175
DVA TVEEVMRIAD+GADLVRITVQG++EADACFEIKN+LVQKNYNIPLVADIH + +
Sbjct: 120 DVAKTVEEVMRIADKGADLVRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHCSYG-S 178
Query: 176 LRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235
LRVAECFDKIRVNPGNFADRRAQFE+LEYTDD+YQKEL+HIE+VFSPLVEKCK+YGRA+R
Sbjct: 179 LRVAECFDKIRVNPGNFADRRAQFEKLEYTDDDYQKELEHIEKVFSPLVEKCKQYGRAMR 238
Query: 236 IGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRL 295
IGTNHGSLSDRIMSYYGDSPRGMVESA EFARICRKLDFHNF+FSMKASNPV+MVQAYRL
Sbjct: 239 IGTNHGSLSDRIMSYYGDSPRGMVESALEFARICRKLDFHNFVFSMKASNPVIMVQAYRL 298
Query: 296 LVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID 355
LVAEMY GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EID
Sbjct: 299 LVAEMYNLGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEID 358
Query: 356 PCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSV 415
PC+RLANLG +AA LQ GVAPFEEKHR YFDFQRRSGQLP+QKEGEEVDYR VLHRDGSV
Sbjct: 359 PCQRLANLGTQAANLQIGVAPFEEKHRRYFDFQRRSGQLPLQKEGEEVDYRNVLHRDGSV 418
Query: 416 LMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVD 475
LMSVSLDQLKAP+LLY+SLAAKLVVGMPFKDLATVDSILLRELP V+D +ARLALKRLVD
Sbjct: 419 LMSVSLDQLKAPDLLYRSLAAKLVVGMPFKDLATVDSILLRELPPVEDAEARLALKRLVD 478
Query: 476 ISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILK 535
ISMGV+ PLSEQLTKPLPHA+VLVNL ELS+GA+KLLPEGTRL V+LRGDESYE+L+ILK
Sbjct: 479 ISMGVLAPLSEQLTKPLPHAIVLVNLDELSSGAHKLLPEGTRLAVTLRGDESYEQLDILK 538
Query: 536 DI-DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGA 594
D+ D TM+LH++P+ E+K GRV AARRLFEYL N LNFPVIHHI FP I RD LVIGA
Sbjct: 539 DVDDITMLLHNVPYGEEKTGRVHAARRLFEYLQANGLNFPVIHHINFPETIDRDGLVIGA 598
Query: 595 GTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
G NVGALLVDGLGDG+ LEA Q+F+FLRDTSFNLLQG C M
Sbjct: 599 GANVGALLVDGLGDGVFLEAADQEFEFLRDTSFNLLQG-CRM 639
>gi|302783400|ref|XP_002973473.1| hypothetical protein SELMODRAFT_149035 [Selaginella moellendorffii]
gi|300159226|gb|EFJ25847.1| hypothetical protein SELMODRAFT_149035 [Selaginella moellendorffii]
Length = 690
Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/585 (76%), Positives = 520/585 (88%), Gaps = 5/585 (0%)
Query: 54 SSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTND 113
+ D+ E++PAS+ SPLLVPRQKYCES+HKT+RR+T TVMVGNVA+GSEHPIRVQTMTT D
Sbjct: 2 AQDVVEMEPASQNSPLLVPRQKYCESVHKTIRRQTSTVMVGNVAVGSEHPIRVQTMTTTD 61
Query: 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPS 173
TKDV GTV++VM+IAD+GAD+VRITVQGK+EAD C+EIKN+LV+K Y+IPLVADIHFAPS
Sbjct: 62 TKDVLGTVDQVMKIADRGADIVRITVQGKKEADCCYEIKNTLVKKGYSIPLVADIHFAPS 121
Query: 174 VALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRA 233
VALRVAECFDKIR+NPGNFADRRAQFE LEYT+D+YQKEL+HIE VF+PLVEKCKKYGRA
Sbjct: 122 VALRVAECFDKIRINPGNFADRRAQFETLEYTEDDYQKELEHIEAVFTPLVEKCKKYGRA 181
Query: 234 VRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY 293
+RIGTNHGSLSDR MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY
Sbjct: 182 IRIGTNHGSLSDRTMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY 241
Query: 294 RLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKE 353
RLLVAEMYV+GW+YPLHLGVTEAGEGEDGRMKSAIGIG LLQDGLGDTIRVSLTEPPE+E
Sbjct: 242 RLLVAEMYVNGWNYPLHLGVTEAGEGEDGRMKSAIGIGALLQDGLGDTIRVSLTEPPEEE 301
Query: 354 IDPCRRLANLGMRAAELQQGVAP--FEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHR 411
IDPC RLANLGMRA+ LQ G AP FEEKHR YFDFQRRSGQLP+QKEGE VDYRGVLHR
Sbjct: 302 IDPCTRLANLGMRASSLQLG-APEQFEEKHRRYFDFQRRSGQLPLQKEGESVDYRGVLHR 360
Query: 412 DGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALK 471
DGSVLMSVSLDQLK E Y+SLA KL++GMP+KD+ATVDSILL+ELP++DD +RL LK
Sbjct: 361 DGSVLMSVSLDQLKNAEQFYRSLATKLIIGMPYKDVATVDSILLKELPALDDKASRLTLK 420
Query: 472 RLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL 531
RLVDISMG++TPLS+QL +PLPHA+ LV L+EL++GA+ LP+G+R+ V + G+E E L
Sbjct: 421 RLVDISMGILTPLSQQLERPLPHAIALVTLEELASGAHNQLPQGSRIAVIVHGNEPSELL 480
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLV 591
E+LK +DA M+L + P +E+ + V ARRL EYL N+L+FPVIH+++F G+ RDD V
Sbjct: 481 ELLKTVDAVMLLLNSP-HEETVSHVHNARRLLEYLQSNSLSFPVIHNLEFKQGLRRDDFV 539
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
I AG+ GALLVDGLGDG+LL+A QDFDF+R TSF LLQG C M
Sbjct: 540 IKAGSEAGALLVDGLGDGILLDAADQDFDFVRSTSFGLLQG-CRM 583
>gi|302809982|ref|XP_002986683.1| hypothetical protein SELMODRAFT_158184 [Selaginella moellendorffii]
gi|300145571|gb|EFJ12246.1| hypothetical protein SELMODRAFT_158184 [Selaginella moellendorffii]
Length = 690
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/585 (76%), Positives = 520/585 (88%), Gaps = 5/585 (0%)
Query: 54 SSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTND 113
+ D+ E++PAS+ SPLLVPRQKYCES+HKT+RR+T TVMVGNVA+GSEHPIRVQTMTT D
Sbjct: 2 AQDVVEMEPASQNSPLLVPRQKYCESVHKTIRRQTSTVMVGNVAVGSEHPIRVQTMTTTD 61
Query: 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPS 173
TKDV GTV++VM+IAD+GAD+VRITVQGK+EAD C+EIKN+LV+K Y+IPLVADIHFAPS
Sbjct: 62 TKDVLGTVDQVMKIADRGADIVRITVQGKKEADCCYEIKNTLVKKGYSIPLVADIHFAPS 121
Query: 174 VALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRA 233
VALRVAECFDKIR+NPGNFADRRAQFE LEYT+D+YQKEL+HIE VF+PLVEKCKKYGRA
Sbjct: 122 VALRVAECFDKIRINPGNFADRRAQFETLEYTEDDYQKELEHIEAVFTPLVEKCKKYGRA 181
Query: 234 VRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY 293
+RIGTNHGSLSDR MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY
Sbjct: 182 IRIGTNHGSLSDRTMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY 241
Query: 294 RLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKE 353
RLLVAEMYV+GW+YPLHLGVTEAGEGEDGRMKSAIGIG LLQDGLGDTIRVSLTEPPE+E
Sbjct: 242 RLLVAEMYVNGWNYPLHLGVTEAGEGEDGRMKSAIGIGALLQDGLGDTIRVSLTEPPEEE 301
Query: 354 IDPCRRLANLGMRAAELQQGVAP--FEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHR 411
IDPC RLANLGMRA+ LQ G AP FEEKHR YFDFQRRSGQLP+QKEGE VDYRGVLHR
Sbjct: 302 IDPCTRLANLGMRASSLQLG-APEQFEEKHRRYFDFQRRSGQLPLQKEGESVDYRGVLHR 360
Query: 412 DGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALK 471
DGSVLMSVSLDQLK E Y+SLA KL++GMP+KD+ATVDSILL+ELP++DD +RL LK
Sbjct: 361 DGSVLMSVSLDQLKNAEQFYRSLATKLIIGMPYKDVATVDSILLKELPALDDKPSRLTLK 420
Query: 472 RLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL 531
RLVDISMG++TPLS+QL +PLPHA+ LV L+E+++GA+ LP+G+R+ V + G+E E L
Sbjct: 421 RLVDISMGILTPLSQQLERPLPHAIALVTLEEVASGAHNQLPQGSRIAVIVHGNEPSELL 480
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLV 591
E+LK +DA M+L + P +E+ + V ARRL EYL N+L+FPVIH+++F G+ RDD V
Sbjct: 481 ELLKTVDAVMLLLNSP-HEETVSHVHNARRLLEYLQSNSLSFPVIHNLEFKQGLRRDDFV 539
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
I AG+ GALLVDGLGDG+LL+A QDFDF+R TSF LLQG C M
Sbjct: 540 IKAGSEAGALLVDGLGDGILLDAADQDFDFVRSTSFGLLQG-CRM 583
>gi|254072126|gb|ACT64770.1| (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Artemisia
annua]
Length = 617
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/512 (86%), Positives = 488/512 (95%), Gaps = 1/512 (0%)
Query: 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDK 184
M+IAD+GAD+VRITVQGKREADACFEIKN+LVQKNYNIPLVADIHFAPSVALRVAECFDK
Sbjct: 1 MQIADRGADIVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPSVALRVAECFDK 60
Query: 185 IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLS 244
IRVNPG+FADRRAQFEQLEYT+D+YQ+EL+HIE+VF+PLVEKCKKYGRA+RIGTNHGSLS
Sbjct: 61 IRVNPGDFADRRAQFEQLEYTEDDYQQELEHIEKVFTPLVEKCKKYGRAMRIGTNHGSLS 120
Query: 245 DRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG 304
DRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MVQAYRLLVAEM V G
Sbjct: 121 DRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAEMNVQG 180
Query: 305 WDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLG 364
WDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCR+LANLG
Sbjct: 181 WDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRKLANLG 240
Query: 365 MRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQL 424
M+A++LQQGVAPFEEKHR YFDFQRR+G LP+QKEGEEVDYRGVLHRDGSV+MSV+LDQL
Sbjct: 241 MKASQLQQGVAPFEEKHRRYFDFQRRTGDLPVQKEGEEVDYRGVLHRDGSVIMSVTLDQL 300
Query: 425 KAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPL 484
K PEL Y+SLAAKLV+GMPFKDLATVDSILLRELP DD DARLALKRL+D+SMG+ITPL
Sbjct: 301 KTPELFYRSLAAKLVLGMPFKDLATVDSILLRELPPADDKDARLALKRLIDVSMGIITPL 360
Query: 485 SEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILH 544
SEQLTKPLP+A+VLVNL ELSTGA+KLLPEGTRLVVS+RGDE YEEL+ILK DATMILH
Sbjct: 361 SEQLTKPLPNAIVLVNLNELSTGAHKLLPEGTRLVVSVRGDEPYEELDILKTTDATMILH 420
Query: 545 DLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVD 604
+LP+ E+K GRV AARRLFEYLSEN+LNFPV+HHI+FP GI RDDLVI AG N GALLVD
Sbjct: 421 ELPYAEEKTGRVHAARRLFEYLSENSLNFPVLHHIKFPKGIPRDDLVISAGANAGALLVD 480
Query: 605 GLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
GLGDG+LLEAP QDF+F+R+TSFNLLQG C M
Sbjct: 481 GLGDGILLEAPDQDFEFIRNTSFNLLQG-CRM 511
>gi|168006348|ref|XP_001755871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692801|gb|EDQ79156.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 687
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/583 (74%), Positives = 507/583 (86%), Gaps = 4/583 (0%)
Query: 54 SSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTND 113
+ ++ E++PAS+GS LLVPRQKYCESIHK VRRKTRTV +G V +GSEHPIRVQTMTT D
Sbjct: 2 APEVVEMEPASQGSQLLVPRQKYCESIHKPVRRKTRTVSIGGVTVGSEHPIRVQTMTTTD 61
Query: 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPS 173
TKDV GTVE+VMRIAD+G D+VRITVQGK+EADAC+EIKN+LVQK YNIPLVADIHFAPS
Sbjct: 62 TKDVKGTVEQVMRIADRGCDIVRITVQGKKEADACYEIKNTLVQKGYNIPLVADIHFAPS 121
Query: 174 VALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRA 233
+A++VA+CFDKIR+NPGNFADRRAQFE LEYT+ +YQ+EL+HIEEVF+PLVEKCKK GRA
Sbjct: 122 IAMKVADCFDKIRINPGNFADRRAQFEILEYTEADYQEELRHIEEVFTPLVEKCKKLGRA 181
Query: 234 VRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAY 293
+RIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRK D+HNFLFSMKASNPVVMVQAY
Sbjct: 182 MRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKHDYHNFLFSMKASNPVVMVQAY 241
Query: 294 RLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKE 353
RLLV+EMYV+ WDYPLHLGVTEAGEGEDGRMKSAIGIG LLQDGLGDTIRVSLTE PE+E
Sbjct: 242 RLLVSEMYVNNWDYPLHLGVTEAGEGEDGRMKSAIGIGALLQDGLGDTIRVSLTEAPEEE 301
Query: 354 IDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDG 413
IDPC +LANLGM+ + Q+GVA FEEKHR YFDFQRR+GQLP+Q+EGE VDYR VLHRDG
Sbjct: 302 IDPCTKLANLGMKISAEQKGVAEFEEKHRRYFDFQRRTGQLPLQREGELVDYRNVLHRDG 361
Query: 414 SVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRL 473
SVLMSV+LDQLK PE+LY+ LA KL++GMP+KDLATVD+ILL +LP V D +RLA+KRL
Sbjct: 362 SVLMSVTLDQLKNPEVLYRDLATKLIIGMPYKDLATVDTILLNKLPEVADRASRLAVKRL 421
Query: 474 VDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEI 533
D+ +GV+TPL+EQL PLPHAM L L E+ +GA++ LP GTRL V+LRGDE E+L
Sbjct: 422 TDVGIGVLTPLAEQLANPLPHAMALATLDEIISGAHENLPAGTRLAVTLRGDEPEEQLAK 481
Query: 534 LKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIG 593
LKD+D M+L +P ++K RV A LFEYL N++NFPVIHH++FP HRDDLVI
Sbjct: 482 LKDLDLIMLLLYIPEGDEKSSRVHA---LFEYLQTNDINFPVIHHLKFPANTHRDDLVIK 538
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
+G+ GA+LVDGLGDG+LLEA DFDFLR+TSF +LQG C M
Sbjct: 539 SGSEAGAMLVDGLGDGVLLEAADLDFDFLRNTSFGMLQG-CRM 580
>gi|29367407|gb|AAO72576.1| isoprenoid biosynthesis-like protein [Oryza sativa Japonica Group]
Length = 608
Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/503 (86%), Positives = 471/503 (93%), Gaps = 2/503 (0%)
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRITVQG++EADACFEIKN+LVQKNYNIPLVADIHFAP+VALRVAECFDKIRVNPGNFAD
Sbjct: 1 VRITVQGRKEADACFEIKNTLVQKNYNIPLVADIHFAPTVALRVAECFDKIRVNPGNFAD 60
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
RRAQFEQLEYT+D+YQKEL+HIE+VFSPLVEKCK+YGRA+RIGTNHGSLSDRIMSYYGDS
Sbjct: 61 RRAQFEQLEYTEDDYQKELEHIEKVFSPLVEKCKQYGRAMRIGTNHGSLSDRIMSYYGDS 120
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
PRGMVESA EFARICRKLDFHNF+FSMKASNPV+MVQAYRLLVAEMY GWDYPLHLGVT
Sbjct: 121 PRGMVESALEFARICRKLDFHNFVFSMKASNPVIMVQAYRLLVAEMYNLGWDYPLHLGVT 180
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTEPPE+EIDPCRRLANLG AA+LQ GV
Sbjct: 181 EAGEGEDGRMKSAIGIGTLLMDGLGDTIRVSLTEPPEEEIDPCRRLANLGTHAADLQIGV 240
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
APFEEKHR YFDFQRRSGQLP+QKEGEEVDYRGVLHRDGSVLMSVSLDQLKA ELLY+SL
Sbjct: 241 APFEEKHRRYFDFQRRSGQLPLQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAXELLYRSL 300
Query: 435 AAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPH 494
AAKLVVGMPFKDLATVDSILLRELP V+D ARLALKRLVDISMGV+TPLSEQLTKPLPH
Sbjct: 301 AAKLVVGMPFKDLATVDSILLRELPPVEDAQARLALKRLVDISMGVLTPLSEQLTKPLPH 360
Query: 495 AMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDI-DATMILHDLPFNEDKI 553
A+ LVN+ ELS+GA+KLLPEGTRL V+LRGDESYE+L++LK + D TM+LH +P+ E+K
Sbjct: 361 AIALVNVDELSSGAHKLLPEGTRLAVTLRGDESYEQLDLLKGVDDITMLLHSVPYGEEKT 420
Query: 554 GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
GRV AARRLFEYL N LNFPVIHHI+FP ++RDDLVIGAG NVGALLVDGLGDG+LLE
Sbjct: 421 GRVHAARRLFEYLETNGLNFPVIHHIEFPKSVNRDDLVIGAGANVGALLVDGLGDGVLLE 480
Query: 614 APGQDFDFLRDTSFNLLQGVCLM 636
A Q+F+FLRDTSFNLLQG C M
Sbjct: 481 AADQEFEFLRDTSFNLLQG-CRM 502
>gi|168028097|ref|XP_001766565.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Physcomitrella patens subsp. patens]
gi|162682210|gb|EDQ68630.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Physcomitrella patens subsp. patens]
Length = 691
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/584 (71%), Positives = 500/584 (85%), Gaps = 2/584 (0%)
Query: 54 SSDIAELQPASEGSPLL-VPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTN 112
+ ++ E++PASEGS LL VPR+KYCESI+K +RRKTRTV VG V +GSEHPIRVQTMTT
Sbjct: 2 APELVEMKPASEGSQLLAVPRKKYCESIYKPIRRKTRTVNVGGVTVGSEHPIRVQTMTTT 61
Query: 113 DTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAP 172
DTKDV TVE+VMRIAD+G D+VRITVQGK+EADAC+ IKN+LVQK YNIPLVADIHFAP
Sbjct: 62 DTKDVQRTVEQVMRIADKGCDIVRITVQGKKEADACYSIKNTLVQKGYNIPLVADIHFAP 121
Query: 173 SVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232
+A++VAE FDKIR+NPGNFADRRAQFE+L YTD +Y +EL+HIEEVF+PLVEKCKKYGR
Sbjct: 122 PIAMKVAEFFDKIRINPGNFADRRAQFEKLVYTDADYAEELRHIEEVFTPLVEKCKKYGR 181
Query: 233 AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQA 292
A+RIGTNHGSLSDRIMSY+GDSPRGMVESAF+FARICRK DFHNF+FSMKASN VVMVQA
Sbjct: 182 AMRIGTNHGSLSDRIMSYHGDSPRGMVESAFQFARICRKNDFHNFVFSMKASNSVVMVQA 241
Query: 293 YRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEK 352
YRLLV EMYV+ WDYPLHLGVTEAGEGEDGRMKSAIGIG LLQDGLGDTIRVSLTE PE+
Sbjct: 242 YRLLVFEMYVNDWDYPLHLGVTEAGEGEDGRMKSAIGIGALLQDGLGDTIRVSLTEAPEE 301
Query: 353 EIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRD 412
EIDPC +LANLGM+ + Q+G+ F+E HR YFDF+RR+GQLP+QKEG+ VD R VLHRD
Sbjct: 302 EIDPCSKLANLGMKISAKQKGLPEFQENHRRYFDFERRTGQLPLQKEGDLVDVRNVLHRD 361
Query: 413 GSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKR 472
GSVLMSV+LDQLK PE LY++LA KL++GMP+KDLATVD+I L +LP+ +D +RLA+KR
Sbjct: 362 GSVLMSVTLDQLKNPEALYRNLATKLIMGMPYKDLATVDTIFLNKLPAAEDRASRLAVKR 421
Query: 473 LVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELE 532
L D+ +GV+TP++EQL LPHAM L L E+++G +K LP G RL V+LRGDE E+LE
Sbjct: 422 LTDVGIGVLTPVAEQLVNSLPHAMALATLDEIASGTHKELPTGIRLAVTLRGDEPEEKLE 481
Query: 533 ILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVI 592
+LKD+D M+L LP ++K V A+R+LFEYL N L+FPVIHH++FP HRDDLVI
Sbjct: 482 MLKDLDLIMLLQYLPEGDEKSSHVHASRKLFEYLQTNKLDFPVIHHLKFPANTHRDDLVI 541
Query: 593 GAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
AG+ GA+LVDGLGDG++LEA QDFDF+R+TSF +LQG C M
Sbjct: 542 KAGSEAGAMLVDGLGDGIMLEAADQDFDFIRNTSFGMLQG-CRM 584
>gi|168024759|ref|XP_001764903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683939|gb|EDQ70345.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 618
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/512 (75%), Positives = 452/512 (88%), Gaps = 1/512 (0%)
Query: 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDK 184
MRIAD+G D+VRITVQG+READAC+EIKN+LVQK Y+IPLVADIHFAP +A++VA+CFDK
Sbjct: 1 MRIADRGCDIVRITVQGRREADACYEIKNTLVQKGYDIPLVADIHFAPPIAMKVADCFDK 60
Query: 185 IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLS 244
IR+NPGNFADRRAQFE+L YT+ +YQ+EL+HIEEVF+PLVEKCKK GRA+RIGTNHGSLS
Sbjct: 61 IRINPGNFADRRAQFEKLSYTEADYQEELRHIEEVFTPLVEKCKKLGRAIRIGTNHGSLS 120
Query: 245 DRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG 304
DRIMSYYGDSPRGMVESAFEFARICRK DFHNFLFSMKASNPVVMVQAYRLLV+EMYV+
Sbjct: 121 DRIMSYYGDSPRGMVESAFEFARICRKHDFHNFLFSMKASNPVVMVQAYRLLVSEMYVND 180
Query: 305 WDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLG 364
WDYPLHLGVTEAGEGEDGRMKSAIGIG LLQDGLGDTIRVSLTE PE+EIDPC +LANLG
Sbjct: 181 WDYPLHLGVTEAGEGEDGRMKSAIGIGALLQDGLGDTIRVSLTEAPEEEIDPCTKLANLG 240
Query: 365 MRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQL 424
M+ + Q+GV F+EKHR YFDFQRR+GQLP+QKE E VDYR VLHRDGSVL+SV+LDQL
Sbjct: 241 MKISAEQKGVPEFQEKHRRYFDFQRRTGQLPLQKEEELVDYRNVLHRDGSVLLSVTLDQL 300
Query: 425 KAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPL 484
K+PE LYK+LA KL++GMP+KDLATVD+ILL +LP+V+D D+RLA+KRL+DI +GV+ PL
Sbjct: 301 KSPEFLYKNLATKLIIGMPYKDLATVDTILLNKLPAVEDMDSRLAVKRLIDIGIGVLVPL 360
Query: 485 SEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILH 544
EQL KPLPHAMVL L E+S+G +K LP GTRL V+LRGDE E+L ILKD+D M+LH
Sbjct: 361 VEQLAKPLPHAMVLATLDEISSGFHKELPAGTRLAVTLRGDEPEEQLAILKDLDLIMLLH 420
Query: 545 DLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVD 604
LP +++ RV A+RRLFEYL N LNFPVIHHI+FP I+RD+LVI AG+ VGA+LVD
Sbjct: 421 YLPEGDERSSRVHASRRLFEYLQTNTLNFPVIHHIKFPANINRDELVIKAGSEVGAMLVD 480
Query: 605 GLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
GLGDG+LLEA DFDFLR +SF +LQG C M
Sbjct: 481 GLGDGVLLEASDLDFDFLRKSSFGMLQG-CRM 511
>gi|302843882|ref|XP_002953482.1| hypothetical protein VOLCADRAFT_63610 [Volvox carteri f.
nagariensis]
gi|300261241|gb|EFJ45455.1| hypothetical protein VOLCADRAFT_63610 [Volvox carteri f.
nagariensis]
Length = 679
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/559 (59%), Positives = 418/559 (74%), Gaps = 3/559 (0%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
KYCES+++T RR TRTVM+G V +GSEH I +QTMTT DT++V TV++V + AD GAD
Sbjct: 4 NKYCESVYQTQRRPTRTVMIGKVPVGSEHRIALQTMTTTDTRNVQLTVDQVKKCADAGAD 63
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
+VRITVQGK+EA+AC I+ L + Y++PLVADIHF P+VA+ VA+ F+KIR+NPGNF
Sbjct: 64 IVRITVQGKKEAEACMRIREQLFKDRYDVPLVADIHFQPTVAMMVADAFEKIRINPGNFV 123
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D R F+ + Y D +++E + IEE F+PLV KCK+ GRAVRIGTNHGSLS RI+S+YGD
Sbjct: 124 DGRKSFDVINYDDPRFERERELIEETFTPLVLKCKQLGRAVRIGTNHGSLSARILSFYGD 183
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+PRGMVESAFEFA +CRK D+HNF+FSMKASNP+VMVQAYRLL EMY GWDYPLHLGV
Sbjct: 184 TPRGMVESAFEFADVCRKHDYHNFVFSMKASNPLVMVQAYRLLAEEMYKKGWDYPLHLGV 243
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
TEAGEGEDGRMKSAIGIG LL DGLGDTIRVSLTE PE EIDPC+RLA LG RA G
Sbjct: 244 TEAGEGEDGRMKSAIGIGALLMDGLGDTIRVSLTEDPEYEIDPCKRLAGLGERAWSTGLG 303
Query: 374 VAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKS 433
VAPF E R F+RR G LP+Q EGEE+D+RG LHRDG+V +VSL+ LK PE+ YK
Sbjct: 304 VAPFTETTRDTHTFKRRVGDLPVQHEGEELDFRGALHRDGTVFSAVSLEDLKQPEVTYKK 363
Query: 434 LAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLP 493
L AKL VGMPFKD+AT DSILLRELP D + R AL+RL +++ VI PL PL
Sbjct: 364 LGAKLAVGMPFKDIATSDSILLRELPPSADKEGRRALRRLQEVTTHVIAPLDALTRDPLA 423
Query: 494 HAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKI 553
A+ LV L++ G L +R + + G E+ E+L L+ + ++L ++ D +
Sbjct: 424 GAIALVPLKQAVQGGIALPQGSSRWAIEVDGTETEEQLGALQGLGPIVVLLNV---ADGV 480
Query: 554 GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
R+ A+RR+F+ + +N+ PVIH+I+FP G HRD++VI G+ VG LLVDGLGDG L+E
Sbjct: 481 SRLHASRRVFDAIKRHNVTAPVIHNIRFPAGTHRDEIVINTGSLVGGLLVDGLGDGALIE 540
Query: 614 APGQDFDFLRDTSFNLLQG 632
PG+D DFLR T+F LLQG
Sbjct: 541 CPGEDLDFLRTTAFGLLQG 559
>gi|384252205|gb|EIE25681.1| putative chloroplast 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate
synthase precursor [Coccomyxa subellipsoidea C-169]
Length = 748
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/602 (57%), Positives = 428/602 (71%), Gaps = 14/602 (2%)
Query: 42 RRFTVIRNSSNSSSDIAELQPASEGSPLLVPRQK------YCESIHKTVRRKTRTVMVGN 95
+R I ++S +Q P+++P++K YCESI++T+RR TRT+ +G
Sbjct: 23 KRAACISHTSRGRRRHIPIQGVVAEGPIILPQEKKLALPKYCESIYQTIRRPTRTIHIGK 82
Query: 96 VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSL 155
V GSEHP+R+QTMTT DT+DVAGTVE+V R D GA++VRITVQGK+EA AC +I+ +L
Sbjct: 83 VETGSEHPVRLQTMTTTDTRDVAGTVEQVKRCVDSGAEIVRITVQGKKEAAACMDIREAL 142
Query: 156 VQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDD-EYQKELQ 214
+ Y++PLVADIHF P VA+ VAE F+KIR+NPGNFAD R FE + Y D +++ E +
Sbjct: 143 FKDGYDVPLVADIHFQPQVAMMVAEAFEKIRINPGNFADGRKTFEVINYDDPAQFKAEQE 202
Query: 215 HIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDF 274
HI E F+PLVEKCK+ GRA+RIGTNHGSLS RI+SYYGD+PRGMVESAFEFA ICR D+
Sbjct: 203 HIRETFTPLVEKCKRLGRAMRIGTNHGSLSARILSYYGDTPRGMVESAFEFADICRDHDY 262
Query: 275 HNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL 334
HNFLFSMKASNP+VMVQAYRLL EMY GWDYPLHLGVTEAGEGEDGRMKSAIGIG LL
Sbjct: 263 HNFLFSMKASNPLVMVQAYRLLAEEMYAKGWDYPLHLGVTEAGEGEDGRMKSAIGIGALL 322
Query: 335 QDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQL 394
DGLGDTIRVSLTE PE EI PC +LA G RA GV PF E HR F RR+G+L
Sbjct: 323 MDGLGDTIRVSLTEDPELEIVPCGKLAGFGERACREGFGVDPFPEAHRDIHTFTRRAGRL 382
Query: 395 PIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSIL 454
P Q+EG+ VD+R +LHRDGSVL +V+L +L+ PEL Y+ L AKLVVGMPFKD AT D++L
Sbjct: 383 PEQREGDPVDFRPLLHRDGSVLSAVTLQELEKPELTYRKLGAKLVVGMPFKDQATSDTLL 442
Query: 455 LRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE---LSTGAYKL 511
L E+P+ D D R AL RL ++ + VI P + PL HA+ L E
Sbjct: 443 LPEVPASSDKDKRRALARLQEVGVHVIAPAAALEADPLQHAVAAFPLSEAAAAVRAGGVR 502
Query: 512 LPEGT-RLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENN 570
LPEG R VS+ G E E++ L+D A + L ++ + RV A+RR FE L ++
Sbjct: 503 LPEGAGRFAVSVDGTEPEEDVAALRDSGAVLALLNV---APGVSRVHASRRFFERLQSHD 559
Query: 571 LNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLL 630
++ PVIH FP G+ RD+LV+ +GT +GALLVDGLGDG+ +E P +D DFLR SF LL
Sbjct: 560 IDIPVIHQRVFPAGVSRDELVLTSGTEIGALLVDGLGDGVAIECPSEDLDFLRTMSFGLL 619
Query: 631 QG 632
QG
Sbjct: 620 QG 621
>gi|428185276|gb|EKX54129.1| hypothetical protein GUITHDRAFT_63981 [Guillardia theta CCMP2712]
Length = 679
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/563 (58%), Positives = 424/563 (75%), Gaps = 7/563 (1%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC+S++KT RRKTRTV G+V IGSEHPI +QTMTT T D+ G++++VMR AD GA LV
Sbjct: 10 YCDSVYKTTRRKTRTVQCGDVPIGSEHPIALQTMTTAMTTDIQGSIDQVMRCADAGAQLV 69
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
R+TVQG+READAC +IK L++K Y PLVADIHFAP +AL+VA+ FDKIR+NPGNFAD
Sbjct: 70 RLTVQGQREADACSKIKEGLLKKGYTTPLVADIHFAPKIALQVADAFDKIRINPGNFADG 129
Query: 196 RAQFEQLEYTDDE-YQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
R FE++ Y + E Y+ EL +IEEVF+PLV KCK+ GRA+RIGTNHGSLS R +SYYGD+
Sbjct: 130 RKSFEEITYENPEDYKAELDYIEEVFTPLVLKCKELGRAMRIGTNHGSLSARTLSYYGDT 189
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESAFEFARICRK D+HNFLFSMKASNP VMVQAYRLL AEMY GWDYP+HLGVT
Sbjct: 190 PAGMVESAFEFARICRKHDYHNFLFSMKASNPKVMVQAYRLLAAEMYDLGWDYPMHLGVT 249
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE-LQQG 373
EAGEGEDGRMKSAIGIG+LLQDGLGDTIRVSLTE P E++PC +L ++ M + +
Sbjct: 250 EAGEGEDGRMKSAIGIGSLLQDGLGDTIRVSLTEDPWFELEPCTKLRDIAMNQKDKIWTP 309
Query: 374 VAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKS 433
V ++E R++ F +R GQLP+Q E + +D R VLHRDGSV+ +VSL+ L +P+ LY +
Sbjct: 310 VPTWKETTRNFMSFSQRQGQLPLQHESDPIDIRNVLHRDGSVISAVSLEDLASPDKLYYN 369
Query: 434 LAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLP 493
L K VGMPFKDLAT DSILL++ P++D R AL+RL ++ +GV+ P E +P+P
Sbjct: 370 LGCKTAVGMPFKDLATSDSILLQQSPAMDASKERTALRRLQEVGVGVLCPAQELQARPIP 429
Query: 494 HAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKI 553
+A+ + +L+++ + KL R +++RGDES EEL LK +A M+L +P D++
Sbjct: 430 NAIAVYDLKQMPSKGAKLPDGAIRYALTVRGDESDEELAKLKSSEAVMLLLRVP---DEV 486
Query: 554 GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
RV A+RR+F +L EN+++ PVIHHI F RD +V+ G+ VG LVDG GDG+L++
Sbjct: 487 SRVHASRRVFNFLKENSIDTPVIHHIVFGADKSRDYVVLLTGSEVGCSLVDGNGDGVLMQ 546
Query: 614 APGQDFDFLRDTSFNLLQGVCLM 636
AP DFLR +SF LLQG C M
Sbjct: 547 AP-LPLDFLRLSSFGLLQG-CRM 567
>gi|61742128|gb|AAX54905.1| putative chloroplast 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate
synthase precursor [Chlamydomonas reinhardtii]
Length = 681
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/565 (59%), Positives = 421/565 (74%), Gaps = 6/565 (1%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YCESI+KT+RR TRTVM+G V +GS+H I +QTMTT DT++V TV++V + AD GAD+V
Sbjct: 9 YCESINKTIRRPTRTVMIGKVPVGSQHRIALQTMTTTDTRNVQLTVDQVKKCADAGADIV 68
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RITVQGK+EA+AC +I+ L + Y++PLVADIHF P+VA+ VA+ F+KIRVNPGNFAD
Sbjct: 69 RITVQGKKEAEACMKIREQLFKDKYDVPLVADIHFQPTVAMMVADAFEKIRVNPGNFADG 128
Query: 196 RAQFEQLEYTDD-EYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
R F+ + Y D E+++E + IEE F+PLV KCK+ GRA+RIGTNHGSLS RI+SYYGD+
Sbjct: 129 RKTFDVINYDDPREFERERELIEETFTPLVLKCKELGRAIRIGTNHGSLSARILSYYGDT 188
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
PRGMVESAFEFA +CRK D+HNF+FSMKASNP+VMVQAYRLL E Y WDYPLHLGVT
Sbjct: 189 PRGMVESAFEFADVCRKHDYHNFVFSMKASNPLVMVQAYRLLAEEQYKRSWDYPLHLGVT 248
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGEGEDGRMKSAIGIG LL DGLGDTIRVSLTE PE E+DPC+RLA LG RA GV
Sbjct: 249 EAGEGEDGRMKSAIGIGALLMDGLGDTIRVSLTEDPEFEMDPCKRLAGLGERAWGSGLGV 308
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
APF E R F RR G LP+Q GE++D+RG LHRDG+V +VSL LK PE LYK L
Sbjct: 309 APFPETTRDTHTFTRRVGDLPVQAPGEDLDFRGALHRDGTVYNAVSLADLKQPEFLYKRL 368
Query: 435 AAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPH 494
AKL VGMPFKD+AT DSI+L E+P+ D DAR AL+RL +++ VI P+ PLP
Sbjct: 369 GAKLAVGMPFKDIATADSIVLSEVPAAADKDARRALRRLQEVTTHVIAPIEALAKDPLPG 428
Query: 495 AMVLVNLQELSTGAYKLLPEG-TRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKI 553
A+ LV LQ+ + G LPEG TR+ V + G E+ +EL +K ++ + L +D +
Sbjct: 429 AIALVALQQAAAGPVT-LPEGSTRMAVQIDGTETEDELAAIKALNPIVALL---ATKDGV 484
Query: 554 GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
R+ ++RR+F+ L + + PVIH I FP G RD++VI G+ VG LLVDGLGDG ++E
Sbjct: 485 SRLHSSRRVFDVLKRHGITTPVIHRITFPAGTVRDEIVITTGSLVGGLLVDGLGDGAMVE 544
Query: 614 APGQDFDFLRDTSFNLLQGVCLMSI 638
PG+D DFLR T+F LLQG + +I
Sbjct: 545 CPGEDTDFLRTTAFGLLQGCRMRNI 569
>gi|159465453|ref|XP_001690937.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chlamydomonas reinhardtii]
gi|158279623|gb|EDP05383.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chlamydomonas reinhardtii]
Length = 681
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/565 (59%), Positives = 421/565 (74%), Gaps = 6/565 (1%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YCESI+KT+RR TRTVM+G V +GS+H I +QTMTT DT++V TV++V + AD GAD+V
Sbjct: 9 YCESINKTIRRPTRTVMIGKVPVGSQHRIALQTMTTTDTRNVQLTVDQVKKCADAGADIV 68
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RITVQGK+EA+AC +I+ L + Y++PLVADIHF P+VA+ VA+ F+KIRVNPGNFAD
Sbjct: 69 RITVQGKKEAEACMKIREQLFKDKYDVPLVADIHFQPTVAMMVADAFEKIRVNPGNFADG 128
Query: 196 RAQFEQLEYTDD-EYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
R F+ + Y D E+++E + IEE F+PLV KCK+ GRA+RIGTNHGSLS RI+SYYGD+
Sbjct: 129 RKTFDVINYDDPREFERERELIEETFTPLVLKCKELGRAIRIGTNHGSLSARILSYYGDT 188
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
PRGMVESAFEFA +CRK D+HNF+FSMKASNP+VMVQAYRLL E Y WDYPLHLGVT
Sbjct: 189 PRGMVESAFEFADVCRKHDYHNFVFSMKASNPLVMVQAYRLLAEEQYKRSWDYPLHLGVT 248
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGEGEDGRMKSAIGIG LL DGLGDTIRVSLTE PE E+DPC+RLA LG RA GV
Sbjct: 249 EAGEGEDGRMKSAIGIGALLMDGLGDTIRVSLTEDPEFEMDPCKRLAGLGERAWGSGLGV 308
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
APF E R F RR G LP+Q GE++D+RG LHRDG+V +VSL LK PE LYK L
Sbjct: 309 APFPETTRDTHTFTRRVGDLPVQAPGEDLDFRGALHRDGTVYNAVSLADLKQPEFLYKRL 368
Query: 435 AAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPH 494
AKL VGMPFKD+AT DSI+L E+P+ D DAR AL+RL +++ VI P+ PLP
Sbjct: 369 GAKLAVGMPFKDIATADSIVLSEVPAAADKDARRALRRLQEVTTHVIAPIEALAKDPLPG 428
Query: 495 AMVLVNLQELSTGAYKLLPEG-TRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKI 553
A+ LV LQ+ + G + LPEG TR+ V + G E+ EL +K ++ + L +D +
Sbjct: 429 AIALVALQQAAAGPVQ-LPEGSTRMAVQIDGTETEAELAAIKALNPIVALL---ATKDGV 484
Query: 554 GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
R+ ++RR+F+ L + + PVIH I FP G RD++VI G+ VG LLVDGLGDG ++E
Sbjct: 485 SRLHSSRRVFDVLKRHGITTPVIHRITFPAGTVRDEIVITTGSLVGGLLVDGLGDGAMVE 544
Query: 614 APGQDFDFLRDTSFNLLQGVCLMSI 638
PG+D DFLR T+F LLQG + +I
Sbjct: 545 CPGEDTDFLRTTAFGLLQGCRMRNI 569
>gi|308807557|ref|XP_003081089.1| putative chloroplast 1-hydroxy-2-methyl-2-(ISS) [Ostreococcus
tauri]
gi|116059551|emb|CAL55258.1| putative chloroplast 1-hydroxy-2-methyl-2-(ISS) [Ostreococcus
tauri]
Length = 726
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/585 (57%), Positives = 413/585 (70%), Gaps = 14/585 (2%)
Query: 54 SSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTND 113
S+D + + + ++VP +YC + +TVRRKTRTV VGNV IGSEH I QTMTT+D
Sbjct: 38 SADAVSREYVVDATGVMVPTGEYCVNHAETVRRKTRTVHVGNVKIGSEHAIVKQTMTTSD 97
Query: 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPS 173
T+DV TV EV+R AD GAD+VRITVQG +EA AC IK +L+ + Y PL+ADIHFAP
Sbjct: 98 TRDVEKTVAEVIRCADAGADMVRITVQGMQEAKACKAIKETLLARGYTTPLIADIHFAPK 157
Query: 174 VALRVAECFDKIRVNPGNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGR 232
VA+ VAECFDKIRVNPGNFAD R FE + Y TD+EY EL IEEVF+PLV KCK+ G
Sbjct: 158 VAMMVAECFDKIRVNPGNFADGRKTFENILYETDEEYNAELAEIEEVFTPLVLKCKERGV 217
Query: 233 AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQA 292
A+RIGTNHGSLS R +S YGD+P GMVESAFEFARICRK D+HNF+FSMKASNP+VMVQA
Sbjct: 218 AMRIGTNHGSLSARTLSRYGDTPMGMVESAFEFARICRKHDYHNFVFSMKASNPLVMVQA 277
Query: 293 YRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEK 352
YRLL EMY GWDYPLHLGVTEAGEGEDGRMKS+IGIG LL DGLGDTIRVSLTE E
Sbjct: 278 YRLLSHEMYKLGWDYPLHLGVTEAGEGEDGRMKSSIGIGALLLDGLGDTIRVSLTEASEL 337
Query: 353 EIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRD 412
EI+PC RLANLGM+A GV FEE HR + F RRSG LP QK+ + +D R +LHRD
Sbjct: 338 EIEPCTRLANLGMKACADNIGVEQFEETHRDFKVFTRRSGDLPEQKDSDAIDLRNILHRD 397
Query: 413 GSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKR 472
GSVL +V+ QL + + Y+ L AKL VGMP +D+AT DSILL E+P + A +++R
Sbjct: 398 GSVLAAVTTQQLASEDGFYRELGAKLAVGMPLRDIATCDSILLSEVPPASEEKALRSIRR 457
Query: 473 LVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEG-TRLVVSLRGDESYEEL 531
L +I GVI P+ E PL +A+ LV+ +++ LP G R V+L G ES E++
Sbjct: 458 LQEIGCGVIVPVEELKKNPLENAIALVSADQIN----DPLPAGAARKAVTLNGFESAEQI 513
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLV 591
+ + DA M L +D R+ ++RRLFE ++ PVIHH+ P+G R D+V
Sbjct: 514 KAVCASDAVMALIK---TKDGESRLHSSRRLFEEIANCGGKLPVIHHMFMPSG-DRSDVV 569
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPGQ----DFDFLRDTSFNLLQG 632
I +G +G LL DGLGDG+L++ G DFLR TSF LLQG
Sbjct: 570 IQSGAQIGGLLCDGLGDGVLIQYTGAAKDISLDFLRTTSFGLLQG 614
>gi|145350194|ref|XP_001419500.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
chloroplast precursor (1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase) (ISPG) [Ostreococcus lucimarinus
CCE9901]
gi|144579732|gb|ABO97793.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
chloroplast precursor (1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase) (ISPG) [Ostreococcus lucimarinus
CCE9901]
Length = 680
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/570 (58%), Positives = 409/570 (71%), Gaps = 14/570 (2%)
Query: 69 LLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIA 128
+L+P KYC + +TVRRKTRTV VGNV IGSEHPI QTMTT+DT+DV TV EV+R A
Sbjct: 6 VLMPTGKYCVNHAETVRRKTRTVHVGNVKIGSEHPIVKQTMTTSDTRDVEKTVAEVIRCA 65
Query: 129 DQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVN 188
D GA++VRITVQG +EA AC IK +LV K Y+ PL+ADIHFAP VA+ VAECFDKIRVN
Sbjct: 66 DAGAEMVRITVQGMQEAKACKIIKETLVAKGYDTPLIADIHFAPKVAMMVAECFDKIRVN 125
Query: 189 PGNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI 247
PGNFAD R FE + Y TD+EY EL IEE+F+PLV KCK+ G A+RIGTNHGSLS R
Sbjct: 126 PGNFADGRKTFENILYETDEEYNAELAEIEEIFTPLVLKCKERGVAMRIGTNHGSLSART 185
Query: 248 MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
+S +GD+P GMVESAFEFARICRK D+HNF+FSMKASNP+VMVQAYRLL EMY GWDY
Sbjct: 186 LSRFGDTPMGMVESAFEFARICRKHDYHNFVFSMKASNPLVMVQAYRLLSHEMYKLGWDY 245
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRA 367
PLHLGVTEAGEGEDGRMKS+IGIG LL DGLGDTIRVSLTE E EI+PC RLANLGM+A
Sbjct: 246 PLHLGVTEAGEGEDGRMKSSIGIGALLLDGLGDTIRVSLTEASELEIEPCTRLANLGMKA 305
Query: 368 AELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAP 427
GV FE+ R + F RR+G LP QK+ + +D+R +LHRDGSVL +V+ QL +
Sbjct: 306 CAENIGVEQFEDSVRDFKTFTRRTGDLPEQKDSDAIDFRNILHRDGSVLAAVTTAQLASE 365
Query: 428 ELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQ 487
+ Y+ L AKL VGMP +D+AT DSILL E+P+ + A +++RL +I GV+ P
Sbjct: 366 DGFYRELGAKLAVGMPLRDIATCDSILLSEVPAASEEKALRSIRRLQEIGCGVVVPADLL 425
Query: 488 LTKPLPHAMVLVNLQELSTGAYKLLPEG-TRLVVSLRGDESYEELEILKDIDATMILHDL 546
PL +A+ LV+ E+ LP G R V+L G E+ E+L+ + DA M+L
Sbjct: 426 RATPLENAIALVSADEVGAP----LPAGAARKAVTLNGFETVEQLKAVAASDAVMVLIK- 480
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
+D R+ ++RR+ E +++ PVIHH+ P G + D+VI +G+ VG LLVDG
Sbjct: 481 --TKDGESRLHSSRRIAEVMAQVGAKMPVIHHMYMPTG-DKSDIVIQSGSQVGGLLVDGF 537
Query: 607 GDGLLLEAPGQD----FDFLRDTSFNLLQG 632
GDG+L++ G D DFLR TSF LLQG
Sbjct: 538 GDGVLIQYAGSDKDVSLDFLRTTSFGLLQG 567
>gi|412991022|emb|CCO18394.1| predicted protein [Bathycoccus prasinos]
Length = 745
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/575 (57%), Positives = 406/575 (70%), Gaps = 13/575 (2%)
Query: 64 SEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEE 123
+EG LL P YC +T RRKTRT+ +GNV +GS+HPI QTMTT+DT+DV TV E
Sbjct: 65 TEGGVLL-PTGLYCPDTTQTFRRKTRTIQIGNVKVGSDHPIVKQTMTTSDTRDVDATVNE 123
Query: 124 VMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFD 183
+MR AD GA++VRITVQG +EA AC EIKN L+Q Y P++ADIHFAP VA+ VA+C D
Sbjct: 124 IMRCADAGAEMVRITVQGMQEAKACQEIKNKLLQSGYTTPIIADIHFAPKVAMTVADCLD 183
Query: 184 KIRVNPGNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
KIR+NPGNFAD R +FE + Y TD+EYQ E+ IEEVF+PLV KCK A+RIGTNHGS
Sbjct: 184 KIRINPGNFADGRKKFEDILYETDEEYQAEIDEIEEVFTPLVLKCKANNVAMRIGTNHGS 243
Query: 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
LS R +S +GD+P GMVESAFEFARICRK D+HNF+FSMKASNP+VMVQAYRLL EMY
Sbjct: 244 LSARTLSRFGDTPAGMVESAFEFARICRKHDYHNFVFSMKASNPLVMVQAYRLLSYEMYK 303
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
GWDYPLHLGVTEAGEGEDGRMKS+IGIG LL DGLGDTIRVSLTE E EI+PC RLAN
Sbjct: 304 LGWDYPLHLGVTEAGEGEDGRMKSSIGIGALLLDGLGDTIRVSLTEASELEIEPCTRLAN 363
Query: 363 LGMRA-AELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSL 421
LGM+A AE G F E R + F+R +G LP QK E +DYR VLHRDGSV+ SV++
Sbjct: 364 LGMKACAEKLGGEDKFTETKRDFQSFERFNGDLPEQKADETIDYRNVLHRDGSVISSVTV 423
Query: 422 DQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVI 481
+QL++ + Y L L VGMP +D+AT DSILLR+ P A +++RL +I GV+
Sbjct: 424 EQLESEDQFYAELGCMLAVGMPLRDIATSDSILLRQAPQASQEKAMRSIRRLQEIGCGVL 483
Query: 482 TPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPE-GTRLVVSLRGDESYEELEILKDIDAT 540
P +E P+P+A+ +V+L + A + LPE R V+L G ES E+L LKDIDA
Sbjct: 484 VPEAELKKNPVPNAIAIVSLAQAI--AKEALPECAERFAVTLNGSESNEDLAKLKDIDAI 541
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
M+L E R+ ++RR+FE L N + PVIHH +G + D+VI G VG
Sbjct: 542 MLLIQ---TEKGRSRIHSSRRIFEVLQANGVKIPVIHHKHIVDG-DKSDVVIQCGAQVGG 597
Query: 601 LLVDGLGDGLLLEAPGQD---FDFLRDTSFNLLQG 632
LL DG GDG+LLE G + FLR TSF LLQG
Sbjct: 598 LLCDGNGDGVLLEYVGNEKIPLSFLRTTSFGLLQG 632
>gi|255088627|ref|XP_002506236.1| predicted protein [Micromonas sp. RCC299]
gi|226521507|gb|ACO67494.1| predicted protein [Micromonas sp. RCC299]
Length = 697
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/591 (54%), Positives = 419/591 (70%), Gaps = 10/591 (1%)
Query: 44 FTVIRNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHP 103
+V+R +S E A+ S +P YC +T+RRKTRTV +G V +GS+HP
Sbjct: 1 MSVVRAASTEPK--IESVAAAVPSDAFLPDGLYCVDNTQTIRRKTRTVTIGKVKMGSDHP 58
Query: 104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIP 163
I QTMTT+DT+DV TV EV + AD GA++VRITVQG +EA AC EIK LV+ Y+ P
Sbjct: 59 IVRQTMTTSDTRDVEATVAEVKKCADAGAEMVRITVQGMQEAKACAEIKKRLVEDGYDTP 118
Query: 164 LVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSP 222
L+ADIHFAP VA+ VAECFDKIRVNPGNFAD R +FE + Y TD+EY E++ IE++F+P
Sbjct: 119 LIADIHFAPKVAMMVAECFDKIRVNPGNFADGRKKFEDILYETDEEYNAEIEEIEKIFTP 178
Query: 223 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMK 282
LV KCK+ G A+RIGTNHGSLS R +S YGD+P GMVESAFEFARICRK D+HNF+FSMK
Sbjct: 179 LVLKCKERGVAMRIGTNHGSLSARTLSRYGDTPAGMVESAFEFARICRKHDYHNFVFSMK 238
Query: 283 ASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTI 342
ASNP+VMVQAYRLL EMY GWDYPLHLGVTEAGEGEDGRMKS+IGIG LL DGLGDTI
Sbjct: 239 ASNPLVMVQAYRLLAHEMYKLGWDYPLHLGVTEAGEGEDGRMKSSIGIGALLLDGLGDTI 298
Query: 343 RVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEE 402
RVSLTE E++PC RL ++G +AA+ + GV FEEK R + DF RR+ LP+QKE +
Sbjct: 299 RVSLTEASHLEMEPCTRLRDVGHKAAQEKWGVDKFEEKGRDFKDFARRASDLPVQKEDDA 358
Query: 403 VDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVD 462
+D R +LHRDGSVL +V+ QL + + Y+ L AKL VGMP +D+AT DSILL E+P
Sbjct: 359 IDLRNILHRDGSVLSAVTPAQLASEDPFYRDLGAKLAVGMPLRDIATSDSILLTEVPEAS 418
Query: 463 DHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPE-GTRLVVS 521
D A +++RL +I +GV+ +++ +P+ +A+ LV ++ ++ A +P+ R+ V
Sbjct: 419 DEKAMRSIRRLQEIGVGVVADVAQLAERPVDNAVALVAAKDATSAA---VPDCAARVAVV 475
Query: 522 LRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQF 581
G E+ EE++ +D M L + + R+ A+RRLF + + PVIHHIQF
Sbjct: 476 FDGTETEEEVKAALGVDPVMALIKCAAD---VSRLHASRRLFTNILAAGSSVPVIHHIQF 532
Query: 582 PNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQG 632
+ +DD+VI +G+ VG LL DGLGDG+L+E P + D+LR TSF LLQG
Sbjct: 533 TDADVKDDIVIQSGSQVGGLLCDGLGDGVLIEHPTAELDYLRRTSFGLLQG 583
>gi|303274695|ref|XP_003056663.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461015|gb|EEH58308.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 732
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 326/602 (54%), Positives = 415/602 (68%), Gaps = 11/602 (1%)
Query: 35 RKFKSGRRRFTVIRNSS--NSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVM 92
RK + TV R +S + I E+ A + + LL P YC + ++T RRKTRTV
Sbjct: 23 RKHAKKAQVSTVTRAASAEKAGPKIVEVAAAVDHNDLL-PEGLYCNAHYQTTRRKTRTVT 81
Query: 93 VGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIK 152
+GNV +GS+HPI QTMTT+DT+DV TV EV++ AD GA++VRITVQG +EA AC IK
Sbjct: 82 IGNVKLGSDHPIVRQTMTTSDTRDVEATVAEVIKCADAGAEMVRITVQGMQEAKACKVIK 141
Query: 153 NSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY-TDDEYQK 211
+L+ K Y PL+ADIHFAP VA+ VAECFDKIRVNPGNFAD R FE+ Y TD+EY +
Sbjct: 142 ETLMAKGYTTPLIADIHFAPKVAMMVAECFDKIRVNPGNFADGRKTFEEKLYETDEEYNE 201
Query: 212 ELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRK 271
EL+ IEE F+PLV KCK+ G A+RIGTNHGSLS R +S YGD+P GMVESAFEFARICRK
Sbjct: 202 ELEMIEETFTPLVLKCKERGVAMRIGTNHGSLSARTLSRYGDTPAGMVESAFEFARICRK 261
Query: 272 LDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIG 331
D+HNF+FSMKASNP+VMVQAYRLL EM+ GWDYPLHLGVTEAGEGEDGRMKS+IGIG
Sbjct: 262 HDYHNFVFSMKASNPLVMVQAYRLLAHEMWKLGWDYPLHLGVTEAGEGEDGRMKSSIGIG 321
Query: 332 TLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRS 391
LL DGLGDTIRVSLTE E++PC RL +LGM A E GV F+E R + F RR
Sbjct: 322 ALLLDGLGDTIRVSLTEASHLEMEPCTRLRDLGMDACEKMIGVEKFDETARDFKSFGRRE 381
Query: 392 GQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVD 451
QLP+QKE + +D R VLHRDGSVL +V+ + L + + Y+ L AKL VGMP +D+AT D
Sbjct: 382 SQLPVQKEDDAIDLRNVLHRDGSVLSAVTPEMLASEDPFYRDLGAKLAVGMPLRDIATSD 441
Query: 452 SILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKL 511
SI+LRE+P DD A +++RL +I +GV+ P+ P+ +A+ +V ++ +T
Sbjct: 442 SIILREIPKPDDEKANRSIRRLQEIGVGVLAPVDALAKTPVANAIAMVAAKDAATAT--- 498
Query: 512 LPE-GTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENN 570
+P+ R+ V + G ES EE+ D M L + R+ A+RR+FE++
Sbjct: 499 IPDCAARVAVVIDGTESEEEIVAALATDPVMC---LIATAPGVSRLHASRRVFEWMHRAG 555
Query: 571 LNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLL 630
PVIH++QF +D +VI +G G LL DGLGDG+++E PG +LR TSF LL
Sbjct: 556 SAVPVIHNMQFDASAEKDTVVIESGAQAGGLLCDGLGDGVVVEHPGVPLSYLRTTSFGLL 615
Query: 631 QG 632
QG
Sbjct: 616 QG 617
>gi|298708973|emb|CBJ30926.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase,
chloroplast precursor [Ectocarpus siliculosus]
Length = 695
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 313/572 (54%), Positives = 398/572 (69%), Gaps = 17/572 (2%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYCE T RR +RTV G V IGSEH I QTMTT +T DV TV +V++ AD GADL
Sbjct: 19 KYCEDTSATKRRTSRTVWAGKVPIGSEHRIARQTMTTTNTNDVDATVAQVIKCADAGADL 78
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRITVQGKREA +C I+ L + Y++PLVADIHF P VA+ VAE F+KIR+NPGNF D
Sbjct: 79 VRITVQGKREAKSCKLIREKLNELGYDVPLVADIHFQPKVAMDVAEVFEKIRINPGNFVD 138
Query: 195 RRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
R FE+ Y + +E+ +L IE F PLV KCK+ GRA+RIGTNHGSLS R++SYYGD
Sbjct: 139 GRKTFEEYVYDSKEEFDADLIPIEASFKPLVLKCKELGRAMRIGTNHGSLSARVLSYYGD 198
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+PRGMVESA EFA ICRK DFHNF+FSMKASNP+VMVQAYRLL AE Y GWDYPLHLGV
Sbjct: 199 TPRGMVESAVEFANICRKYDFHNFVFSMKASNPLVMVQAYRLLAAEQYRRGWDYPLHLGV 258
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
TEAGEGEDGRMKSAIGIG LL DGLGDTIRVSLTE PE E+ PC LA +G RA G
Sbjct: 259 TEAGEGEDGRMKSAIGIGALLMDGLGDTIRVSLTEDPEFELSPCAELAEIGKRATADTAG 318
Query: 374 ---VAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELL 430
V FEE R + F+RR+G LP Q+E + VD RG LHRDGSV+M +S++ L+ P+ L
Sbjct: 319 HAAVPAFEETTRDFQSFERRTGALPEQQETDPVDVRGYLHRDGSVMMPISVEDLQNPQAL 378
Query: 431 YKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTK 490
Y+ L K VGMPFKD+AT DS+ L ++P+ DD AR +L+R+ + +GV+ PL+
Sbjct: 379 YQVLGFKTAVGMPFKDIATTDSVYLEQVPATDDKKARTSLRRMQEAGVGVLAPLAALEAN 438
Query: 491 PLPHAMVLVNLQELS-TGAYKLLPEGT-RLVVSLRGDESYEELEILKDIDATMI--LHDL 546
P+ +A+ +V+L++++ +G LPEG RL V + G E+L +L +I + L ++
Sbjct: 439 PIANAVAVVSLEDVAKSGGQVNLPEGAIRLAVEIEG---TEDLSVLSNISPKPMVGLLNV 495
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNG--IHRDDLVIGAGTNVGALLVD 604
P + RV A+RR+F++L++ + VIH FP+ + +D ++ G VG LVD
Sbjct: 496 PAG---VSRVHASRRVFQHLADAKNDLAVIHLASFPDASEMTQDKFILSVGAQVGGCLVD 552
Query: 605 GLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
GLGDG++++APG D LR F LLQG C M
Sbjct: 553 GLGDGVMVQAPGLDVGMLRSVCFGLLQG-CRM 583
>gi|307108049|gb|EFN56290.1| hypothetical protein CHLNCDRAFT_144676 [Chlorella variabilis]
Length = 698
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/575 (54%), Positives = 392/575 (68%), Gaps = 45/575 (7%)
Query: 69 LLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIA 128
LL P KYCESI +T RR TRTV +G V +GSEHPI +QTMTT DT+D+ TVE+V R A
Sbjct: 56 LLTP--KYCESISQTRRRPTRTVDIGPVKVGSEHPIALQTMTTTDTRDIEATVEQVKRCA 113
Query: 129 DQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVN 188
D GAD+VRITVQ KREA+AC +I+ L + Y PLVADIHF P+VA+ VA+ F+KIR+N
Sbjct: 114 DAGADIVRITVQSKREAEACMKIRERLFKDRYTTPLVADIHFQPAVAMMVADAFEKIRIN 173
Query: 189 PGNFADRRAQFEQLEYTDD-EYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI 247
PGNFAD R F+ + Y D ++ E +I EVF+PLVEKCK RA+RIGTNHGSLS RI
Sbjct: 174 PGNFADGRKTFDVINYDDPAQFAAERDYIREVFTPLVEKCKSLNRAMRIGTNHGSLSARI 233
Query: 248 MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
+S+YGD+PRGMVESAFEFA ICR D+HNFLFSMKASNP+VM
Sbjct: 234 LSFYGDTPRGMVESAFEFADICRDHDYHNFLFSMKASNPLVM------------------ 275
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRA 367
GEDGRMKSAIGIG+LL DGLGDTIRVSLTE PE EIDPC RLANLG +A
Sbjct: 276 -----------GEDGRMKSAIGIGSLLMDGLGDTIRVSLTEDPEFEIDPCGRLANLGKKA 324
Query: 368 AELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAP 427
+ GV FEE HR F RR G LP Q+EG+ DYR +LHRDGSVL V L+ P
Sbjct: 325 DQEGWGVDAFEE-HRDTHLFTRRVGTLPEQREGDTADYRPLLHRDGSVLSVVYPKDLEQP 383
Query: 428 ELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQ 487
E++Y+ L AKLVVGMPFKD+AT D+IL+ + PS D + R AL+RL ++ + V+ P
Sbjct: 384 EMMYRRLGAKLVVGMPFKDIATADTILMYQTPSSSDTEGRRALRRLQEVGVHVMAPAEVL 443
Query: 488 LTKPLPHAMVLVNLQELSTGAYKL----LPEGT-RLVVSLRGDESYEELEILKDIDATM- 541
PLP A+ ++ L ++ A++ LPEG RL V + G E +L LKD+ A M
Sbjct: 444 AADPLPDAVAVMQLA-VAASAHRAGGVKLPEGAGRLAVFIDGTEGEADLATLKDMGAVMA 502
Query: 542 ILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGAL 601
+L P + RV ++RR+FE L + ++ PVIHHI FP+G RDD+V+ +G+ VGAL
Sbjct: 503 LLKTAP----GLSRVHSSRRVFEQLQQQGISIPVIHHITFPDGTTRDDIVLQSGSMVGAL 558
Query: 602 LVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLM 636
+VDG GDGL++E +D D+LR T+F LLQG C M
Sbjct: 559 MVDGYGDGLVVECASEDTDYLRTTAFGLLQG-CRM 592
>gi|224006295|ref|XP_002292108.1| gcpe-like protein [Thalassiosira pseudonana CCMP1335]
gi|220972627|gb|EED90959.1| gcpe-like protein [Thalassiosira pseudonana CCMP1335]
Length = 686
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 299/577 (51%), Positives = 394/577 (68%), Gaps = 22/577 (3%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYCE ++ RRKTRTV G + GS+HPI QTM T DT +V ++E++MR AD+G DL
Sbjct: 3 KYCEDLYSVTRRKTRTVTCGPIQFGSDHPIVRQTMATTDTANVDASIEQIMRCADKGFDL 62
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
+RITVQGKREA+A +I+ L +K Y+IPL AD+HF P VA VA+ +KIR+NPGNFAD
Sbjct: 63 IRITVQGKREANAAAKIREGLFKKGYDIPLCADMHFQPVVAQLVADAVEKIRINPGNFAD 122
Query: 195 RRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
R FE+ Y ++ +Y KE +++ E PLV+KCK R +RIGTNHGSLS R++SYYGD
Sbjct: 123 GRKDFEEKVYESEADYVKEREYLVEAMLPLVQKCKDLNRCMRIGTNHGSLSSRVLSYYGD 182
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+PRGMVESA EFA ICR D+HNF+FSMKASNP+VMVQ+YRLL +EMY WDYPLHLGV
Sbjct: 183 TPRGMVESALEFADICRSQDYHNFVFSMKASNPLVMVQSYRLLASEMYRLDWDYPLHLGV 242
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGM-RAAELQQ 372
TEAGEGEDGRMKSA+GIGTLL DGLGDT+RVSLTE PE E +PC RL+ + R A
Sbjct: 243 TEAGEGEDGRMKSAVGIGTLLADGLGDTVRVSLTEDPEFEYEPCNRLSEMAEGRLAATNP 302
Query: 373 GVAPFEEKHRHYFD------FQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS---LDQ 423
A + + Y D + RR G LP +KEGE+VD L+ +GSV+ +S L +
Sbjct: 303 EAAARQSAVKKYVDTRDITTYSRRVGTLPTKKEGEKVDVEQFLNPNGSVISYISPKMLSE 362
Query: 424 LKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITP 483
AP LYK L K VGMPFKD+AT DS+ +RELP+ DD +AR AL+R++++ GVI P
Sbjct: 363 GNAP-YLYKELGFKTAVGMPFKDIATSDSVFMRELPATDDSNARTALRRMMEVGTGVIVP 421
Query: 484 LSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGT-RLVVSLRGDESYEELEILKDIDATMI 542
E PL +A+ LV+L E + + +PEG RL V + G E + + +KD+D MI
Sbjct: 422 AEELKENPLENAVALVSLTE-AVKSNGEIPEGAIRLAVEIDGSEDDDTIAKVKDLDPVMI 480
Query: 543 LHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALL 602
+ ++++ ++ A+RR+FE L N +N P IHH + + +DL + GT +G+LL
Sbjct: 481 FIAI---DEELSQLHASRRIFEILKTNEINVPAIHHYK-SSVADSNDLALELGTKIGSLL 536
Query: 603 VDGLGDGLLLEAPGQ---DFDFLRDTSFNLLQGVCLM 636
DG GDG+L+E G+ +FLR+T F+LLQG C M
Sbjct: 537 TDGNGDGILIEQVGETNFSVEFLRNTGFSLLQG-CRM 572
>gi|219116532|ref|XP_002179061.1| 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate synthase
[Phaeodactylum tricornutum CCAP 1055/1]
gi|209402469|gb|ACI45957.1| putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase precursor [Phaeodactylum tricornutum]
gi|217409828|gb|EEC49759.1| 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate synthase
[Phaeodactylum tricornutum CCAP 1055/1]
Length = 757
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 298/576 (51%), Positives = 387/576 (67%), Gaps = 20/576 (3%)
Query: 72 PRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQG 131
P QKYCE +++ RRKTRTV G + GS+HPI QTM T +T DV T+++VMR AD+G
Sbjct: 67 PIQKYCEDLYEVTRRKTRTVNCGPIKFGSDHPIVRQTMATTNTADVEATMDQVMRCADKG 126
Query: 132 ADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGN 191
DLVR+TVQGKREA+AC +I+ L +K Y+IPL AD+HF P VAL VA+ +KIR+NPGN
Sbjct: 127 FDLVRVTVQGKREANACAKIREGLFKKGYDIPLCADMHFQPVVALLVADAVEKIRINPGN 186
Query: 192 FADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSY 250
FAD R F + Y T+++Y E ++ E PLVEKCK R +RIGTNHGSLS R++S+
Sbjct: 187 FADGRKDFNEKVYETEEDYYAERGYLVEALQPLVEKCKDLDRCMRIGTNHGSLSSRVLSF 246
Query: 251 YGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLH 310
YGD+PRGMVESA EFA ICR LD+HNF+FSMKASNP+VMVQ+YRLL AE Y WDYPLH
Sbjct: 247 YGDTPRGMVESAIEFADICRSLDYHNFVFSMKASNPLVMVQSYRLLAAEQYRLDWDYPLH 306
Query: 311 LGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLG------ 364
LGVTEAGEGEDGRMKSAIGIGTLL DGLGDT+RVSLTE PE E DPC RLA +
Sbjct: 307 LGVTEAGEGEDGRMKSAIGIGTLLADGLGDTVRVSLTEDPEFEYDPCNRLAEIAEGRLAA 366
Query: 365 -MRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQ 423
A+ +Q + R F RR G LP + EG+ VD G L+ GSV+ V+ +
Sbjct: 367 NNAEAKARQAAVQTYKDTRDITTFARRQGALPAKDEGDAVDCSGFLNTAGSVISPVTPEM 426
Query: 424 LK--APELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVI 481
LK + + LY+ L K VGMPFKD+AT DSI +R +P D ++R AL+RL++++MGV+
Sbjct: 427 LKGSSAQYLYQDLGCKTAVGMPFKDVATTDSIFMRTVPPSSDTESRTALRRLIEVNMGVV 486
Query: 482 TPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGT-RLVVSLRGDESYEELEILKDIDAT 540
P PLP+A+ L++L + K LPEG RL V++ G E E + +KD+
Sbjct: 487 VPAEVLEKDPLPNAVALMDLTDAIAKGGK-LPEGAIRLAVTIDGSEDDETIAKVKDLQPA 545
Query: 541 MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGA 600
P +E + + +ARR+FE N++ VIHH + N ++L + GT +G+
Sbjct: 546 FAFLK-PKSE--LSHLHSARRVFELFKSNDIETAVIHHFE-SNTNDANELALQVGTKIGS 601
Query: 601 LLVDGLGDGLLLEAPGQD----FDFLRDTSFNLLQG 632
LL DG GDG+++E G++ DFLR TSF+LLQG
Sbjct: 602 LLTDGNGDGIMIEQVGEEKPFSVDFLRRTSFSLLQG 637
>gi|397625071|gb|EJK67655.1| hypothetical protein THAOC_11283, partial [Thalassiosira oceanica]
Length = 756
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 291/581 (50%), Positives = 379/581 (65%), Gaps = 19/581 (3%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L P +YCE ++ RR TRTV G V GSEHPI QTM T DT +V ++E++MR AD
Sbjct: 74 LGPLGRYCEDLYSVRRRPTRTVTCGPVKFGSEHPIVRQTMATTDTANVDASIEQIMRCAD 133
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
+G DLVRITVQGKREA+A +I+ L +K Y IPL AD+HF P VA VAE +KIR+NP
Sbjct: 134 EGFDLVRITVQGKREANAAMQIREGLFKKGYTIPLCADMHFQPKVAQLVAEAVEKIRINP 193
Query: 190 GNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248
GNFAD R FE Y ++ +Y E Q++ + PLVE CK+ R +RIGTNHGSLS R++
Sbjct: 194 GNFADGRKDFEDKVYESEADYVAERQYLFDAMVPLVETCKRLDRCMRIGTNHGSLSSRVL 253
Query: 249 SYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYP 308
SYYGD+PRGMVESA EFA ICR D+HNF+FSMKASNP+VMVQ+YRLL +EMY WDYP
Sbjct: 254 SYYGDTPRGMVESALEFADICRSQDYHNFVFSMKASNPLVMVQSYRLLASEMYRLDWDYP 313
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLG-MRA 367
LHLGVTEAGEGEDGRMKSA+GIGTLL DGLGDT+RVSLTE PE E PC RL+ + R
Sbjct: 314 LHLGVTEAGEGEDGRMKSAVGIGTLLADGLGDTVRVSLTEDPEFEYKPCNRLSEMAEARL 373
Query: 368 AELQQGVAPFEEKHRHYFD------FQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSL 421
A G +E R Y D + RR G LP+ ++VD L+ +GSV+ +V+
Sbjct: 374 AAKNPGAKERQEAVRTYVDTRDVTSYARRVGDLPVTAADDKVDVGLFLNPNGSVISAVNP 433
Query: 422 DQLKAPE--LLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMG 479
L A LYK L K VGMPFKD+AT DSI +R LP D D R AL+R++++ G
Sbjct: 434 WMLSADSAPYLYKELGFKTAVGMPFKDVATSDSIFMRTLPEADKKDERTALRRMMEVGTG 493
Query: 480 VITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDA 539
VI P E PL + + L++L++ K+ RL + + G E E + +KD++
Sbjct: 494 VIVPAEELERNPLDNTVALMSLEDAVKADGKIPDCAIRLAIEIDGSEDDETIAKVKDLNP 553
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
M+ + D + ++ A+RR+FE N++N P IHH + + +++ +G GT VG
Sbjct: 554 LMVFISIA---DGLSQLHASRRIFEIFKSNDINTPAIHHFKTTSD-DSNEIALGLGTKVG 609
Query: 600 ALLVDGLGDGLLLEAPGQ----DFDFLRDTSFNLLQGVCLM 636
+LL DG GDG+L+E G+ DF+R+T F+LLQG C M
Sbjct: 610 SLLTDGNGDGILIEQVGETANFSVDFVRNTGFSLLQG-CRM 649
>gi|338176232|ref|YP_004653042.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Parachlamydia
acanthamoebae UV-7]
gi|336480590|emb|CCB87188.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Parachlamydia
acanthamoebae UV-7]
Length = 656
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 276/568 (48%), Positives = 379/568 (66%), Gaps = 39/568 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYC S ++T+RRKTR V++GN+ +G HPIR+Q+MTT+ T++V TV++++R+AD G ++
Sbjct: 2 KYCTSHYQTIRRKTREVLIGNIGVGGNHPIRIQSMTTSSTRNVEATVDQIIRLADAGCEI 61
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TVQG +EA+AC IKN LV+K Y IPLVADIHF P A+ VA+ DKIR+NPGN+ D
Sbjct: 62 VRMTVQGMKEAEACEHIKNDLVKKGYLIPLVADIHFYPPAAMGVADFVDKIRINPGNYVD 121
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
+RA F+ +EY D Y E++ IEE F+PLVEKCK+ +A+RIGTNHGSLSDRIM+ YGD+
Sbjct: 122 KRANFKVIEYDDATYAAEIEKIEEKFTPLVEKCKRLKKAIRIGTNHGSLSDRIMNRYGDT 181
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RICRK DFH+ +FSMKASNP+VM+QAYRLLVAEM GWDYPLHLGVT
Sbjct: 182 PFGMVESALEFTRICRKNDFHDLIFSMKASNPLVMIQAYRLLVAEMEKLGWDYPLHLGVT 241
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGEGEDGR+KSA+GIG LL DG+GDTIRVSLTE P E+DPC+RL +L QGV
Sbjct: 242 EAGEGEDGRIKSAMGIGALLLDGIGDTIRVSLTEDPWNEVDPCQRLVHLAQNCQ--GQGV 299
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
APF+E HR + ++R P +HR+G+V++SV+ + LK + Y+SL
Sbjct: 300 APFQESHRSITEVKKREITFPPHV---------AMHRNGTVIVSVTSEMLKKTD-FYQSL 349
Query: 435 AAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPH 494
+ +G +T D I++ P D+ ++ L R+V +G+ +P PL H
Sbjct: 350 GCENQLGTIKIKTSTPDMIVINH-PERDEKVLQM-LNRMVKSGIGLASPY------PLTH 401
Query: 495 AMVLVNLQELSTGAYKLLPEGTRLVVSLRG----------DESYEELEILKDIDATMILH 544
A+V+ +LQE T +++ + R V L +S EE + L D+ +I+
Sbjct: 402 ALVIQSLQEAMT-SHQKQQQTARFAVGLPARPQPLAIDIDTDSEEEWKWLHDLKPEVIIF 460
Query: 545 DLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVD 604
K R+ A+RR FE++ ++ V+ H + + +++DL+I A GALL D
Sbjct: 461 S-----PKEHRLHASRRFFEWIQNAKISTSVMLHFTYVS--NKEDLIIQAAAEFGALLCD 513
Query: 605 GLGDGLLLEAPGQDFDFLRDTSFNLLQG 632
GLG+G+ +EAP + DFLR SFN+LQ
Sbjct: 514 GLGEGIWIEAP-HELDFLRQLSFNILQA 540
>gi|323454677|gb|EGB10547.1| hypothetical protein AURANDRAFT_71112 [Aureococcus anophagefferens]
Length = 2166
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 303/589 (51%), Positives = 387/589 (65%), Gaps = 33/589 (5%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYCES+ + VRRKTRTV G V+ GS+H I QTM T T+DVAGT+++VMR +D G DL
Sbjct: 70 KYCESLREVVRRKTRTVTAGPVSFGSDHKIVRQTMGTTSTRDVAGTIDQVMRCSDAGFDL 129
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
R+TV G +EA AC +I+ L +K Y+IPL AD+HF P VA++ AE +KIR+NPGNFAD
Sbjct: 130 FRLTVVGMKEATACHDIREGLFKKGYDIPLCADMHFQPKVAMKTAEAVEKIRINPGNFAD 189
Query: 195 -RRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
R+ + + Y T+++Y ++ +I E F+PLV KCK+ RA+RIGTNHGSLS R++S++G
Sbjct: 190 GRKVDEDTVSYETEEDYLRDRDNIVEQFAPLVLKCKELNRAMRIGTNHGSLSARVLSFFG 249
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
DS RGMVESA EFA ICR LD+HNF+FSMKASNPVVM+Q YRLL AE Y GWDYPLHLG
Sbjct: 250 DSSRGMVESAVEFADICRSLDYHNFVFSMKASNPVVMIQGYRLLAAEQYRLGWDYPLHLG 309
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLG----MRAA 368
VTEAGEGEDGRMKSAIGIGTLL DGLGDTIRVSLTE PE E PC RLA L + A
Sbjct: 310 VTEAGEGEDGRMKSAIGIGTLLGDGLGDTIRVSLTEDPEYEYAPCNRLAELSEANELPPA 369
Query: 369 ELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLK--- 425
+ Q P R F RR G LP Q+EG++ DYRG+LHRDGSVL +S ++LK
Sbjct: 370 KKAQLAVPEYSDTRDVTMFDRRRGFLPAQREGDQHDYRGLLHRDGSVLSFISAEELKTLG 429
Query: 426 -----APELLYKSLAAKLVVG-----MPFKDLATVDSILLRELPSVDDHDARLALKRLVD 475
L+++L AK V G +P KD+AT D++ LRE P++DD AR ALK L
Sbjct: 430 ELGPFGASALFRALGAKTVDGPGGASLPMKDVATTDTLFLREPPAIDDEAARDALKTLRG 489
Query: 476 ISMGVITPLSEQLTKPLPHAMVLVNLQEL----STGAYKLLPEGTRLVVSLRGDESYEEL 531
+ + PL PLP A+ V+ L + G L + R+VV+ RGDE+ E+L
Sbjct: 490 AGVHCVVPLDALAEAPLPGAVPAVDCAALGDDATLGKLPLASDSGRMVVTCRGDETDEQL 549
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYL---SENNLNFPVIHHIQFPNGIHRD 588
E L+ + + L + + R+ A RRLFE L + + V+HH++ P R
Sbjct: 550 EALRAM-GDQVDFVLAETDPSLSRLHATRRLFEKLGRGAPGDEGLSVVHHLRAPE-CDRS 607
Query: 589 DLVIGAGTNVGALLVDGLGDGLLLE---APGQDFD--FLRDTSFNLLQG 632
+L + G G LL DGLGDG+L+E A +FD +LRDTSF LLQG
Sbjct: 608 ELALQLGMQAGGLLGDGLGDGVLVEPEVANTANFDVAYLRDTSFALLQG 656
>gi|46446374|ref|YP_007739.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Protochlamydia amoebophila UWE25]
gi|50400882|sp|Q6MD85.1|ISPG_PARUW RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|46400015|emb|CAF23464.1| probable gcpE protein [Candidatus Protochlamydia amoebophila UWE25]
Length = 654
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/574 (48%), Positives = 375/574 (65%), Gaps = 40/574 (6%)
Query: 73 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGA 132
++KYCE+IH+T RR TR V VGNV IG HPIR+Q+MTT+ T+DV T+E+V+R+ADQG
Sbjct: 3 QKKYCEAIHQTERRPTRIVNVGNVGIGGNHPIRIQSMTTSSTRDVEATIEQVIRLADQGC 62
Query: 133 DLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNF 192
++VR+TVQG +EADAC IK L+++ Y IPLVADIHF P A+RV + DK+R+NPGNF
Sbjct: 63 EIVRVTVQGIKEADACEHIKKGLIKRGYQIPLVADIHFYPPAAMRVVDFVDKVRINPGNF 122
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
D+RA F+Q+ Y D+ Y +E++ IEE F+PLVEKCK+ RA+RIGTNHGSLSDRIM+ YG
Sbjct: 123 VDKRASFKQIVYDDESYAREIERIEEKFTPLVEKCKRLNRAMRIGTNHGSLSDRIMNRYG 182
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P GMVESA EFARICRK D+HNFLFSMKASNP VM+QAYRLL MY WDYPLHLG
Sbjct: 183 DTPFGMVESALEFARICRKNDYHNFLFSMKASNPQVMIQAYRLLTQAMYALEWDYPLHLG 242
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAGEGEDGR+KSA+GIG+LL DG+GDTIRVSLTE P EI+PC+RL L +A QQ
Sbjct: 243 VTEAGEGEDGRIKSAMGIGSLLIDGIGDTIRVSLTEDPWHEINPCQRLIKLA--SAYQQQ 300
Query: 373 GVAPFEEKHRHYFDFQRR----SGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPE 428
GVAPF E +R +RR S +P +HRDG+V +S+ ++ LK
Sbjct: 301 GVAPFIENYRQIEAIERRQVHLSSTVP-------------MHRDGTVFISLPINMLKEAS 347
Query: 429 LLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITP----- 483
LY+ + + G P AT D+++L+ P+ D + R L+ L D+ +G+ +
Sbjct: 348 -LYQQIGCEGPFGKPKLKTATADNLVLKN-PNSDSEEKR-QLQILKDLGIGLFSKDPFEM 404
Query: 484 --LSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATM 541
+ L K L V S+ K G L++ + DE+ +E + + + +
Sbjct: 405 SLVIHPLKKWLQSRAVDSFASRFSSSWAK--SAGQPLIIQIT-DETEKEWKEVISLKPQL 461
Query: 542 ILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGAL 601
I+ N R+ +R+ FE+L +N LN+PVI + F +D ++ A G+L
Sbjct: 462 IILSPSTN-----RLHYSRQFFEWLQQNQLNYPVI--LNFTYQGENEDTILLASMECGSL 514
Query: 602 LVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCL 635
L DGLG+G+ LE P D FLR SF++LQ L
Sbjct: 515 LCDGLGEGVWLEGP-YDILFLRQLSFSILQAARL 547
>gi|282891885|ref|ZP_06300364.1| hypothetical protein pah_c200o034 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498145|gb|EFB40485.1| hypothetical protein pah_c200o034 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 632
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/545 (48%), Positives = 360/545 (66%), Gaps = 39/545 (7%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G HPIR+Q+MTT+ T++V TV++++R+AD G ++VR+TVQG +EA+AC IKN LV+
Sbjct: 1 MGGNHPIRIQSMTTSSTRNVEATVDQIIRLADAGCEIVRMTVQGMKEAEACEHIKNDLVK 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
K Y IPLVADIHF P A+ VA+ DKIR+NPGN+ D+RA F+ +EY D Y E++ IE
Sbjct: 61 KGYLIPLVADIHFYPPAAMGVADFVDKIRINPGNYVDKRANFKVIEYDDATYAAEIEKIE 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
E F+PLVEKCK+ +A+RIGTNHGSLSDRIM+ YGD+P GMVESA EF RICRK DFH+
Sbjct: 121 EKFTPLVEKCKRLKKAIRIGTNHGSLSDRIMNRYGDTPFGMVESALEFTRICRKNDFHDL 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+FSMKASNP+VM+QAYRLLVAEM GWDYPLHLGVTEAGEGEDGR+KSA+GIG LL DG
Sbjct: 181 IFSMKASNPLVMIQAYRLLVAEMEKLGWDYPLHLGVTEAGEGEDGRIKSAMGIGALLLDG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQ 397
+GDTIRVSLTE P E+DPC+RL +L QGVAPF+E HR + ++R P
Sbjct: 241 IGDTIRVSLTEDPWNEVDPCQRLVHLAQNCQ--GQGVAPFQESHRSITEVKKREITFPPH 298
Query: 398 KEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRE 457
+HR+G+V++SV+ + LK + Y+SL + +G +T D I++
Sbjct: 299 V---------AMHRNGTVMISVTSEMLKKTD-FYQSLGCENQLGTIKIKTSTPDMIVINH 348
Query: 458 LPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTR 517
P D+ ++ L R+V +G+ +P PL A+V+ +LQE T +Y+ + R
Sbjct: 349 -PERDEKVLQM-LNRMVKSGIGLASPY------PLTQALVIQSLQEAMT-SYQKQQQTAR 399
Query: 518 LVVSLRG----------DESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLS 567
V L +S EE + L D+ +I+ K R+ A+RR FE++
Sbjct: 400 FAVGLPARPQPLAIDIDTDSEEEWKWLHDLKPEVIIFS-----PKEHRLHASRRFFEWIQ 454
Query: 568 ENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSF 627
++ PV+ H + + +++DL+I A GALL DGLG+G+ +EAP + DFLR SF
Sbjct: 455 NAKISTPVMLHFTYVS--NKEDLIIQAAAEFGALLCDGLGEGIWIEAP-HELDFLRQLSF 511
Query: 628 NLLQG 632
N+LQ
Sbjct: 512 NILQA 516
>gi|377648358|gb|AFB70983.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase, partial
[Mitragyna speciosa]
Length = 237
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/237 (92%), Positives = 234/237 (98%)
Query: 181 CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240
CFDKIRVNPGNFADRRAQFEQLEYT++EYQ+EL+HIE+VF+PLVEKCKKYGRA+RIGTNH
Sbjct: 1 CFDKIRVNPGNFADRRAQFEQLEYTEEEYQEELEHIEQVFTPLVEKCKKYGRAMRIGTNH 60
Query: 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300
GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF+FSMKASNPV+MV+AYRLLVAEM
Sbjct: 61 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVEAYRLLVAEM 120
Query: 301 YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
YV GWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE+EIDPCRRL
Sbjct: 121 YVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEEEIDPCRRL 180
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLM 417
ANLG RAAE+QQGV PFEEKHRHYFDFQRR+GQLP+QKEGEEVDYRGVLHRDGSVLM
Sbjct: 181 ANLGTRAAEIQQGVEPFEEKHRHYFDFQRRTGQLPVQKEGEEVDYRGVLHRDGSVLM 237
>gi|338732866|ref|YP_004671339.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Simkania
negevensis Z]
gi|336482249|emb|CCB88848.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Simkania
negevensis Z]
Length = 604
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 262/570 (45%), Positives = 348/570 (61%), Gaps = 84/570 (14%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y E+I++T R KTR V VG V +G +PIR+Q+MTT+DT+DV T ++MR+AD G ++
Sbjct: 2 RYSEAIYQTKRWKTREVKVGKVGVGGNNPIRIQSMTTSDTRDVEATANQIMRLADTGCEI 61
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
R+TVQGK+EA+AC IKN+LVQK Y+IP+VADIHF P A+ V + DK+RVNPGNF D
Sbjct: 62 ARVTVQGKKEAEACEGIKNTLVQKGYDIPVVADIHFYPPAAMLVVDYVDKVRVNPGNFVD 121
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
RRA F +EY D Y+ EL+ I+E F PLVEKCKK RA+RIGTNHGSLSDRIM+ YGD+
Sbjct: 122 RRATFRTIEYDDASYEAELRKIDETFGPLVEKCKKLKRAMRIGTNHGSLSDRIMNRYGDT 181
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EFAR+CRKL +H+F+FSMKASNP+VM+QAYRLLV EM GW+YPLHLGVT
Sbjct: 182 PFGMVESALEFARVCRKLGYHDFMFSMKASNPLVMMQAYRLLVHEMMKLGWNYPLHLGVT 241
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ-- 372
EAG+GEDGR+KSA+GIG+LL DGLGDTIRVSLTE P EIDPC+RL +R AE +
Sbjct: 242 EAGDGEDGRVKSAVGIGSLLLDGLGDTIRVSLTEDPWAEIDPCKRL----IRLAESYEGK 297
Query: 373 GVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK 432
G PF E R+ +RR V LHRDGSV++++
Sbjct: 298 GTLPFIETKRNVAAIERRY-----------VRQTSPLHRDGSVILNLE------------ 334
Query: 433 SLAAKLVVGMPFKDLAT----VDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQL 488
P DL T VD++ + + + D D+++ TP
Sbjct: 335 ---------SPSTDLGTKEGKVDAVYMEKYEPLKD-----------DVTILTRTP----- 369
Query: 489 TKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPF 548
+ A+++ +L+E E ++ GD S L + MIL +L
Sbjct: 370 --NVSGALLVKDLEEFD--------ETAQVAWVKDGDPS--SWNRLLEHPVKMILLELTE 417
Query: 549 NEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGD 608
+ + R F+++ ++ L+ PVI + + + +D VI A +GALL DG G+
Sbjct: 418 SP-----IHQGRYFFDWIQQSKLDIPVILVVSY--DLSEEDTVIHAAAELGALLGDGYGE 470
Query: 609 GLLLE---APGQDFDFLRDTSFNLLQGVCL 635
G+LL PGQ+ R SFN+LQ L
Sbjct: 471 GILLRTRLTPGQN----RSLSFNILQACRL 496
>gi|429327881|gb|AFZ79641.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Babesia equi]
Length = 770
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/591 (41%), Positives = 357/591 (60%), Gaps = 37/591 (6%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YCESI +R TR V +G V IG PI +QTMT++DT DV TV+++++ GA +V
Sbjct: 88 YCESISNRIRFPTRCVKIGKVTIGGNSPIALQTMTSSDTNDVDATVDQILKSRQHGASMV 147
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
R+TVQ REA + IK L+ +IPL+ADIHF P VAL A+ +DK+RVNPGN+ D
Sbjct: 148 RLTVQSPREAKSSVAIKEKLLSIGCDIPLIADIHFNPKVALLAADVYDKVRVNPGNYVDG 207
Query: 196 RAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
R ++ Y T++E++K + IEE+F+PLVEKCKK +A+RIGTNHGSLS RIMSYYGDS
Sbjct: 208 RKNWDMKVYETEEEFRKSGEFIEEMFTPLVEKCKKLKKAIRIGTNHGSLSSRIMSYYGDS 267
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
PRGMVESA EFA IC KLDFH+ +FSMK+SN VM AYRLLV E+Y GW+YP+HLGVT
Sbjct: 268 PRGMVESALEFAAICVKLDFHDIVFSMKSSNVYVMTHAYRLLVHELYKRGWNYPIHLGVT 327
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG +DGR+KSA+GIGTLL DG+GDTIR+SLTE P E+ P R+L R ++
Sbjct: 328 EAGSVDDGRIKSALGIGTLLMDGIGDTIRMSLTEDPWLELSPARKLVECVERYTKINTKE 387
Query: 375 APFEEKHRHYFDFQRRSGQL--PIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK 432
E R++ D ++R I K E + +L+ DGSV ++ + L P LYK
Sbjct: 388 TLRE--FRNFQDIEKRELDYGTSILKYAEGGNKNTLLNPDGSVGCILTSEDLSDPITLYK 445
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL 492
SL + G+P +++ +VD ++L +P + + +K L++ + V+ P+ + P+
Sbjct: 446 SLGVSMNNGLPQRNIKSVDFVVLESVPQFHECSKQRIVKELIEGGIQVVAPVDQLKYNPI 505
Query: 493 PHAMVLVNLQEL----------STGAYKLLPEGTRL-VVSLR--GDESYEE-LEILKDID 538
++ LV+L++L + + +L +V++R G+E+ E+ L++ D +
Sbjct: 506 KFSIGLVDLEKLPNFQRSQSEKTEDNKDFIDYADKLPIVAVRITGNETDEQILQMCNDTN 565
Query: 539 ATM----------ILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRD 588
+ + I+ + N + V RR+F L N N PVIH + + +
Sbjct: 566 SKVRIAGHAKVGFIIMTIDPN---LNNVATVRRIFGLLVRANSNIPVIHQLDLTSYKDHE 622
Query: 589 DLVIGAGTNVGALLVDGLGDGLLLEA--PGQDFDFLRDTSFNLLQGVCLMS 637
D+V+ A T V LVD LG+GL+ + P Q+ + + S N+LQ + S
Sbjct: 623 DVVVAASTLVSCHLVDKLGEGLICKTSLPLQESNAI---SLNILQNARMRS 670
>gi|156085603|ref|XP_001610211.1| gcpE protein [Babesia bovis]
gi|154797463|gb|EDO06643.1| gcpE protein [Babesia bovis]
Length = 772
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/583 (39%), Positives = 338/583 (57%), Gaps = 38/583 (6%)
Query: 67 SPLLVPR------QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
+PL +P YCES+ + +R TR V +GNV IG PI +QTMT++DT D+ T
Sbjct: 70 APLCIPNCNTASNNVYCESVTERIRFPTREVRIGNVTIGGNRPIALQTMTSSDTYDIDAT 129
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE 180
V++++ GA LVR+ VQ REA A IK L+ + N+PLVADIH++P VAL AE
Sbjct: 130 VKQIITCHQYGASLVRLAVQSPREAKASAVIKEKLLSQGCNVPLVADIHYSPKVALMAAE 189
Query: 181 CFDKIRVNPGNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239
FDK+RVNPGN+ D R +++ Y T++E+++ + IEE +PL+EKCKK RA+RIGTN
Sbjct: 190 IFDKVRVNPGNYVDGRKDWDEKIYKTEEEFREGTKLIEERLTPLIEKCKKLKRAIRIGTN 249
Query: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299
HGSLS RIMSYYGDSP GMV SA EFA IC K DFH+ +FSMK+SN VMV AYRLLV E
Sbjct: 250 HGSLSSRIMSYYGDSPMGMVMSAMEFAEICVKNDFHDIVFSMKSSNSFVMVHAYRLLVNE 309
Query: 300 MYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 359
+Y GW+YP+HLGVTEAG +DGR+KSA+GIG+LL DG+GDTIR+SLTE P E+ P R+
Sbjct: 310 LYKRGWNYPIHLGVTEAGSVDDGRIKSAMGIGSLLLDGIGDTIRLSLTEDPWLELLPGRK 369
Query: 360 LANL--GMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLM 417
L G+ + R + + RR+ + + +L+RDGSV
Sbjct: 370 LLQYVDGITKKDGSSTKPRIRSDFRDFNNISRRTIDYGTSLLDFDDGRKTILNRDGSVGC 429
Query: 418 SVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDIS 477
++ + L P LYK+L + G+P + L +VD I + P D + + LK L++
Sbjct: 430 LITDEDLSDPLTLYKALNVVMKDGLPQRCLKSVDFIYMENTPLFHDFNGQRVLKELIEGG 489
Query: 478 MGVITPLSEQLTKPLPHAMVLVNLQEL--------------STGAYKLLPEGTRLVVSLR 523
V+ P+ + +P+ A+ +V+L +L + + L + +
Sbjct: 490 FQVLAPVDQLQEQPIKFAIGVVDLMKLEDFQRSQSSPNHPYAETRIDFTDKIANLAIRIT 549
Query: 524 GDESYEELEILKDID------------ATMILHDLPFNEDKIGRVQAARRLFEYLSENNL 571
G+E LE L I+ MI+ D+ + K+ V+ RR+F L +N
Sbjct: 550 GNEPDSYLEKLCSIERGISSKALGSGVPRMIILDI---DSKLNHVETVRRIFGILVKNGS 606
Query: 572 NFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
PV+H + +++VI T + L+D LG+G+++++
Sbjct: 607 KLPVVHMVDATECFDHEEVVINVSTALSTHLIDKLGEGVMIKS 649
>gi|403222264|dbj|BAM40396.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Theileria
orientalis strain Shintoku]
Length = 834
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/618 (37%), Positives = 360/618 (58%), Gaps = 81/618 (13%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYCE+++K VR TR V +G V IG +PI +QTMT+ DT DV TV++++++ + GAD+
Sbjct: 91 KYCENVYKRVRFPTRCVKIGKVTIGGNNPIALQTMTSCDTNDVKETVDQILKVQEYGADM 150
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TVQ RE + IK L N +IPL+ADIHF P VAL AE +DK+RVNPGN+ D
Sbjct: 151 VRLTVQSPREVKSSVLIKEKLTSLNCDIPLIADIHFNPKVALMSAEIYDKVRVNPGNYVD 210
Query: 195 RRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
R ++ Y + +E++K ++IEE+F+PLVEKCK+ +A+RIGTNHGSLS R+MS+YGD
Sbjct: 211 GRKNWDTKVYDSYEEFKKSGEYIEEMFTPLVEKCKQLKKAIRIGTNHGSLSSRVMSFYGD 270
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P GMV SA EFA +CRK DFH+F+FSMK+SN VM+ AYRLLV EMY WDYP+HLGV
Sbjct: 271 TPLGMVMSAVEFAEVCRKNDFHDFVFSMKSSNVFVMIHAYRLLVNEMYKRSWDYPIHLGV 330
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL------------- 360
TEAG +DGR+KS +GIG+LL DG+GDTIR+SLTE P E+ P R+L
Sbjct: 331 TEAGSVDDGRIKSCLGIGSLLIDGIGDTIRMSLTEDPWYELLPSRKLLESVKELYPEKEE 390
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRS---GQLPIQKEGEEVDYRGVLHRDGSVLM 417
++ G + +E + ++ K R + + +RR+ G + E ++ +L+ +GSV
Sbjct: 391 SSNGDKKSESKDEEGDYD-KWRDFRNIERRNVKYGTSMLNYNDETKNH--LLNPNGSVGT 447
Query: 418 SVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVD-- 475
++ L LYKSL +V G+P K L +VD ++L ++P +++ + +K L++
Sbjct: 448 ILNTHHLNNRIELYKSLGLDIVNGLPNKSLQSVDFVILEDVPYFHEYNKQRVVKELIEGG 507
Query: 476 ----------------ISMGVITPLSEQL---TKPLPHA------------MVLVNLQEL 504
++G++T ++ +KP + +V +NL E
Sbjct: 508 VHVISPIAKLRFNPIKFTIGLVTVKEYRMLIRSKPSQYYFDEKNKNNSNNRLVGINLDEE 567
Query: 505 STGAYKL----------------LPEGTRLVVSLRGDESYEELEILKDI---DATMILHD 545
+ L + +LVV + G+E+ EEL + A + +
Sbjct: 568 NGEGGGGTMESEDELELNRLMNELNKFEKLVVKITGNETDEELMEFFNTYKKQANQLNNK 627
Query: 546 LPFNE---------DKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGT 596
NE K+ + RR+F +++ N + PVIH ++FPN + D+++ +
Sbjct: 628 EKKNEVGFIILEIDSKLNYMYTVRRIFGLINKTNCDLPVIHQLKFPNLEDQQDMLVKSCC 687
Query: 597 NVGALLVDGLGDGLLLEA 614
+G L+D +G+G+++++
Sbjct: 688 LLGCNLIDKMGEGIIIKS 705
>gi|71031182|ref|XP_765233.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Theileria
parva strain Muguga]
gi|68352189|gb|EAN32950.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Theileria parva]
Length = 801
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 241/664 (36%), Positives = 359/664 (54%), Gaps = 97/664 (14%)
Query: 57 IAELQPASEGSPLLVPRQK-----YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTT 111
IA P S L +++ YCE+++K R TR V +G V IG HPI +QTMT+
Sbjct: 41 IANFNPKKRDSRLFEKKEEDGDKTYCENVYKRERFPTRCVKIGKVTIGGNHPIAIQTMTS 100
Query: 112 NDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA 171
DT DV TV++++++ + G+D+VRITVQ RE + IK L N +IPL+AD HF
Sbjct: 101 CDTNDVQQTVDQILKVQEYGSDMVRITVQSPREVKSSELIKEKLNSLNCDIPLIADTHFN 160
Query: 172 PSVALRVAECFDKIRVNPGNFADRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKY 230
VA+ A+ FDK+RVNPGN+ R ++ Y T++E++K ++IEEVF+PLV KCK+
Sbjct: 161 AKVAMLCADIFDKVRVNPGNYVIGRKNWDMKVYNTEEEFKKSGEYIEEVFTPLVLKCKEL 220
Query: 231 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMV 290
+A+RIGTNHGSLS R+MSYYGD+P GMV SA EFA ICRK DFHNF+FS+K+SN VM+
Sbjct: 221 KKAIRIGTNHGSLSSRVMSYYGDTPLGMVMSAIEFAEICRKNDFHNFVFSLKSSNIFVMI 280
Query: 291 QAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPP 350
AYRLLV M GWDYP+HLGVTEAG +DGR+KS +GIG+LL DG+GDTIR+SLTE P
Sbjct: 281 HAYRLLVNIMKKRGWDYPIHLGVTEAGSVDDGRIKSCLGIGSLLIDGIGDTIRMSLTEDP 340
Query: 351 EKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFD-----------FQRRSGQLPIQKE 399
E+ PCR+L +L G + H + D F + E
Sbjct: 341 WFELIPCRKLLE---SVQKLYPGTKIIDTDHMNERDNVGEKLIPDKSFNYDDWRDFRSIE 397
Query: 400 GEEVDY------------RGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDL 447
EV+Y +L+ +GSV + L LYKSL +V G+P + L
Sbjct: 398 RREVNYGKSILNYEDSNKNNLLNPNGSVGTVLHSHHLNNRVELYKSLGLDIVNGLPSRSL 457
Query: 448 ATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTG 507
+VD + L ++P +++ + +K L++ + V+ PL + P+ A+ LV + E
Sbjct: 458 KSVDFVFLEDVPYFHEYNKQRLIKELIEGGINVVLPLRKLKYNPIKFAIGLVTVDE---- 513
Query: 508 AYKLLPEGT----------------------------------------------RLVVS 521
Y LL T +LVV
Sbjct: 514 -YNLLTRSTPKRYHNDNRSTNHPDSRLMGIDLNNEVPGQPILEDRDVVDELNKLEKLVVK 572
Query: 522 LRGDESYEELEILKDI---DATMILHDLPFN----------EDKIGRVQAARRLFEYLSE 568
+ G+E+ ++L L + + T+ L++ N + K+ + RR+F L++
Sbjct: 573 ITGNETDDQLLDLFNTHQRNETLNLNNKDRNNQIGFIILDIDPKLNYMYTVRRIFGLLNK 632
Query: 569 NNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFN 628
+ PVIH + FP+ ++ D+++ + +G L+D +G+G+++++ D S +
Sbjct: 633 TKCDLPVIHQLNFPSLENQQDMLVDSCCLLGCNLIDKMGEGIIIKSK-LPIDITNKLSLD 691
Query: 629 LLQG 632
+LQ
Sbjct: 692 ILQN 695
>gi|171363681|dbj|BAG14389.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Perkinsus
marinus]
Length = 798
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 245/617 (39%), Positives = 343/617 (55%), Gaps = 52/617 (8%)
Query: 38 KSGR--RRFTVIRNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGN 95
KSG+ +R + R + +S I P G + V YC+ + +RRKTRTVMVGN
Sbjct: 100 KSGKTPKRSGLARRAVAGASAIGRFDP---GPIMAVADLPYCKGVDHPIRRKTRTVMVGN 156
Query: 96 VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSL 155
V +GSEH + +QTM+ + T DV TV+++ R AD G D+VR+TVQG +EA A IK L
Sbjct: 157 VPVGSEHRLALQTMSNSSTDDVDATVKQIERCADAGIDIVRVTVQGIKEAHATKLIKERL 216
Query: 156 VQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQH 215
++ Y P+VADIHF P VA+ AE DKIR+NPGNF D F+++ E E Q
Sbjct: 217 LKDGYTTPIVADIHFKPKVAMLAAEACDKIRINPGNFIDGMKTFDKITEVTPEIAAEWQ- 275
Query: 216 IEEVFS---PLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL 272
EE+F PLVE K+ G+ +RIG NHGSLS+RI++ YGD+P GMV SA E +CR L
Sbjct: 276 -EEMFKTLKPLVESLKRQGKCMRIGVNHGSLSERILTQYGDTPEGMVASALEVGLMCRAL 334
Query: 273 DFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGT 332
DFHN +FSMK+SN VMV AYRLL AEM GWDYPLHLGVTEAG G DGR+KSAIGIG
Sbjct: 335 DFHNIIFSMKSSNTRVMVAAYRLLAAEMEKRGWDYPLHLGVTEAGGGSDGRIKSAIGIGA 394
Query: 333 LLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRSG 392
LLQDGLGDT+RVSLTE P E+ PC L ++ + + + +H + +G
Sbjct: 395 LLQDGLGDTVRVSLTEDPWHEVGPCSALRDVYEES---------LKARPKHTSSNRSSAG 445
Query: 393 QL-----PIQKEGEEVDYRGV---LHRDGSVLMSVSLDQLKA--PELLYKSLAAKLVV-G 441
P E+D + LH+DGS+++ S ++ K E + K L KL G
Sbjct: 446 AAVADVDPYHFAKREIDTSAIDAPLHKDGSLILRYSPEEAKKNLKEYMTKGLGLKLRKDG 505
Query: 442 MPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNL 501
KD+ +VD +L+ ++ DA + + + V GV+ ++ + LP + +LV+
Sbjct: 506 RYQKDIGSVDVLLVE-----NETDADMDVLKAVQ-ETGVVILGTKNI---LPGSTLLVSE 556
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIG-RVQAAR 560
+ G +V S E+++ + + L F D RV A R
Sbjct: 557 PSMLDSVNPARAGGCACIV-----RSSEDVDKVLGHPKKGAVRFLIFKPDSAACRVHAGR 611
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHR-----DDLVIGAGTNVGALLVDGLGDGLLLEAP 615
++ + + ++ L P++ +P G + D VI + G+L VDGLGDG+ +
Sbjct: 612 QVAKAVRKSRL--PLLMWFTYPEGDSKAKAGSDAAVILGASEFGSLFVDGLGDGIFWDDR 669
Query: 616 GQDFDFLRDTSFNLLQG 632
G + RD NL+QG
Sbjct: 670 GLTTEETRDVGLNLMQG 686
>gi|84994652|ref|XP_952048.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Theileria
annulata strain Ankara]
gi|65302209|emb|CAI74316.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase, putative
[Theileria annulata]
Length = 808
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 237/653 (36%), Positives = 356/653 (54%), Gaps = 107/653 (16%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
+ YCE+++K R TR V +G V IG +PI +QTMT+ DT DV TV++++++ + G+D
Sbjct: 63 KTYCENVYKRERFPTRCVKIGKVTIGGNNPIAIQTMTSCDTNDVQQTVDQILKVQEYGSD 122
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
+VRITVQ REA + IK L N +IPL+AD HF VA+ A+ FDK+RVNPGN+
Sbjct: 123 MVRITVQSPREAKSSELIKEKLSSLNCDIPLIADTHFNAKVAMLCADIFDKVRVNPGNYV 182
Query: 194 DRRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
R ++ Y T++E++K ++IEE F+PLV KCK+ +A+RIGTNHGSLS R+MSYYG
Sbjct: 183 IGRKNWDMKVYNTEEEFKKSGEYIEEAFTPLVLKCKELKKAIRIGTNHGSLSSRVMSYYG 242
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P GMV SA EFA ICRK DFHNF+FS+K+SN VM+ AYRLLV M GWDYP+HLG
Sbjct: 243 DTPLGMVMSAIEFAEICRKNDFHNFVFSLKSSNIFVMIHAYRLLVNVMKKRGWDYPIHLG 302
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAG +DGR+KS +GIG+LL DG+GDTIR+SLTE P E+ PCR+L +L
Sbjct: 303 VTEAGSVDDGRIKSCLGIGSLLIDGIGDTIRMSLTEDPWFELIPCRKLLE---SVQKLYP 359
Query: 373 GVAPFEEKHRH-------------YFDFQRRSGQLPIQKEGEEVDY-RGVLHRD------ 412
G + H F++ I++ EV+Y + VL +
Sbjct: 360 GTKIINTDNIHENNKDQDKIIPSTTFNYDDWRDFRSIER--REVNYGKSVLTYEDNNKNN 417
Query: 413 --------GSVLMSVSLDQLK--APEL--LYKSLAAKLVVGMPFKDLATVDSILLRELPS 460
G+VL S L+ P+L LYKSL ++V G+P + L +VD +LL ++P
Sbjct: 418 LLNPNGSVGTVLNSHHLNNRVRIYPQLVELYKSLGLEIVKGLPSRSLKSVDFVLLEDVPF 477
Query: 461 VDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGT---- 516
+++ + +K L++ + V+ PL + P+ A+ LV + E Y +L T
Sbjct: 478 FHEYNKQRVIKELIEGGVNVVLPLRKLKYNPIKFAIGLVTVDE-----YNVLTRSTPKRF 532
Query: 517 ------------------------------------------RLVVSLRGDESYEELEIL 534
+LVV + G+E+ ++L L
Sbjct: 533 HNDSRINSHRDSRLIGIDLNEGDPGQSLLDDQDLLDELNKLEKLVVKITGNETDDQL--L 590
Query: 535 KDIDATMILHDLPFN---------------EDKIGRVQAARRLFEYLSENNLNFPVIHHI 579
+ + L N + K+ + RR+F L++ + PVIH +
Sbjct: 591 DLFNTHQRIEKLNVNNKDRKNQIGFIILDIDPKLNYMYTVRRIFGLLNKTKSDLPVIHQL 650
Query: 580 QFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQG 632
FP+ ++ D+++ + +G L+D +G+G+++++ D S ++LQ
Sbjct: 651 NFPSLENQQDMLVDSCCLLGCNLIDKMGEGIIIKSK-LPIDITNKLSLDILQN 702
>gi|399217680|emb|CCF74567.1| unnamed protein product [Babesia microti strain RI]
Length = 709
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 235/547 (42%), Positives = 333/547 (60%), Gaps = 27/547 (4%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYC+S R TR V +GNV IG +PI +QTMT++DT +V TV++++R AD GA +
Sbjct: 35 KYCQSTVVYKRHPTRPVKIGNVTIGGNNPIAIQTMTSSDTANVPDTVDQILRCADAGASI 94
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TVQ REA A EIK+ L+ N +IPLVADIHF P +AL A+ FDK+R+NPGNF D
Sbjct: 95 VRLTVQSPREAKASHEIKDRLLAMNCHIPLVADIHFNPKIALLAADVFDKVRINPGNFTD 154
Query: 195 RRAQFEQLEY-TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
R ++ Y T+ E+ + + I + +PL+EKCK+ GRA+RIGTNHGSLS RI+SYYGD
Sbjct: 155 GRKTWDNKVYNTEAEFLEGGERIRQDVAPLIEKCKRLGRAIRIGTNHGSLSSRILSYYGD 214
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+PRGMVESA E A+IC ++DFH+ +FSMK+SN VMV +YRLL +EMY G++YP+HLGV
Sbjct: 215 TPRGMVESALEVAKICVEMDFHDIVFSMKSSNVNVMVHSYRLLASEMYKRGYNYPIHLGV 274
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQ-Q 372
TEAG G DGR+KS +GIG LL DGLGDTIR+SLTE P EI PC++L N + L+ +
Sbjct: 275 TEAGLGTDGRIKSTLGIGLLLLDGLGDTIRMSLTEDPWHEIAPCKQLLN---HISTLRTK 331
Query: 373 GVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK 432
V F E HR + + RR+ K G+ +L++DG+V +S + + P LY
Sbjct: 332 KVEDFVEMHRDFTNIARRNLDYTQNKIGDN-----ILNKDGTVAVSTPISEFADPINLYN 386
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLA--LKRLVDISMGVITPLSEQLTK 490
SL +LV G+P K L + D I +PS++ H K L + + ++ + +
Sbjct: 387 SLGLELVNGIPRKTLNSADMIY---IPSLNPHSLSYGRTFKELAEAGVSLLANYDDLIKY 443
Query: 491 PLPHAMVLVNLQ--ELSTGAYKL--LPEGTRLVVSLRGDESYEELEILKDIDATMILHDL 546
+P A+ L++L LST + L + +RG+E + ++ + + DL
Sbjct: 444 RIPQAIPLIDLDSPNLSTNFQCISDLNHRGHFAMRIRGNEDIHTFKQNSKLNPSFFVVDL 503
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGL 606
P + D I RR+ + E L+ P+I +I P + +I A LVD +
Sbjct: 504 PIDGDII---STHRRVMNIVCELELSQPIIFYI--PRQLCG---IIPITLAASAPLVDKM 555
Query: 607 GDGLLLE 613
+GLLL
Sbjct: 556 AEGLLLH 562
>gi|294879242|ref|XP_002768617.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Perkinsus marinus ATCC 50983]
gi|239871288|gb|EER01335.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Perkinsus marinus ATCC 50983]
Length = 798
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 235/577 (40%), Positives = 326/577 (56%), Gaps = 47/577 (8%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC+ + +RRKTRTVMVGNV +GSEH + +QTM+ + T DV TV+++ R AD G D+V
Sbjct: 137 YCKGVDHPIRRKTRTVMVGNVPVGSEHRLALQTMSNSSTDDVDATVKQIERCADAGIDIV 196
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
R+TVQG +EA A IK L++ Y P+VADIHF P VA+ AE DKIR+NPGNF D
Sbjct: 197 RVTVQGIKEAHATKLIKERLLKDGYTTPIVADIHFKPKVAMLAAEACDKIRINPGNFIDG 256
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFS---PLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
F+++ E E Q EE+F PLVE K+ G+ +RIG NHGSLS+RI++ YG
Sbjct: 257 MKTFDKITEVTPEIAAEWQ--EEMFKTLKPLVESLKRQGKCMRIGVNHGSLSERILTQYG 314
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P GMV SA E +CR LDFHN +FSMK+SN VMV AYRLL AEM GWDYPLHLG
Sbjct: 315 DTPEGMVASALEVGLMCRALDFHNIIFSMKSSNTRVMVAAYRLLAAEMEKRGWDYPLHLG 374
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAG G DGR+KSAIGIG LLQDGLGDT+RVSLTE P E+ PC L ++ +
Sbjct: 375 VTEAGGGSDGRIKSAIGIGALLQDGLGDTVRVSLTEDPWHEVGPCSALRDVYEES----- 429
Query: 373 GVAPFEEKHRHYFDFQRRSGQL-----PIQKEGEEVDYRGV---LHRDGSVLMSVSLDQL 424
+ + +H + +G P E+D + LH+DGS+++ S ++
Sbjct: 430 ----LKARPKHTSSNRSSAGAAVADVDPYHFAKREIDTSAIDAPLHKDGSLILRYSPEEA 485
Query: 425 KA--PELLYKSLAAKLVV-GMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVI 481
K E + K L KL G KD+ +VD +L+ ++ DA + + + V GV+
Sbjct: 486 KKNLKEYMTKGLGLKLRKDGRYQKDIGSVDVLLVE-----NETDADMDVLKAVQ-ETGVV 539
Query: 482 TPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATM 541
++ + LP + +LV+ + G +V S E+++ +
Sbjct: 540 ILGTKNI---LPGSTLLVSEPSMLDSVNPARAGGCACIV-----RSSEDVDKVLGHPKKG 591
Query: 542 ILHDLPFNEDKIG-RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHR-----DDLVIGAG 595
+ L F D RV A R++ + ++ L P++ +P G + D VI
Sbjct: 592 AVRFLIFKPDSAACRVHAGRQVARAVRKSRL--PLLVWFTYPEGDSKAKAGSDAAVILGA 649
Query: 596 TNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQG 632
+ G+L VDGLGDG+ + G + RD NL+QG
Sbjct: 650 SEFGSLFVDGLGDGIFWDDRGLTTEETRDVGLNLMQG 686
>gi|373952788|ref|ZP_09612748.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Mucilaginibacter paludis DSM 18603]
gi|373889388|gb|EHQ25285.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Mucilaginibacter paludis DSM 18603]
Length = 693
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 241/602 (40%), Positives = 326/602 (54%), Gaps = 71/602 (11%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S+ + R TR V +G+V +G +PIR+Q+MTT +T D GTVE+ +R+ D G + V
Sbjct: 13 YCNSLTEYSRFVTREVTIGDVPMGGNNPIRIQSMTTTNTMDTLGTVEQSIRMVDAGCEYV 72
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA EIK L ++ Y +PLVADIHF P+ A A +K+RVNPGN+AD+
Sbjct: 73 RITAPSIKEAQNLAEIKKELRKRGYTVPLVADIHFTPNAAEVAARIVEKVRVNPGNYADK 132
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F+QLEYT EYQ EL I + F+PLV+ CK+YG A+RIGTNHGSLSDRIMS YGD+P
Sbjct: 133 K-KFDQLEYTPAEYQAELDRIYQKFAPLVKICKEYGTAMRIGTNHGSLSDRIMSQYGDTP 191
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
RGMVESA EF R+C L+++N + SMK+SNP VMVQAYR+LV M G +YPLHLGVTE
Sbjct: 192 RGMVESAMEFMRMCEALNYYNLVISMKSSNPQVMVQAYRMLVETMVAEGMNYPLHLGVTE 251
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN----LGMRAAELQ 371
AG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E L N G R L+
Sbjct: 252 AGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEEPEYESPVAIALVNRYFVRGQRGGSLE 311
Query: 372 QGV---APFEEKHRHYFDFQ-----RRSGQL----PIQKEGEEVDYRGVL--HRDGSVLM 417
GV P H Q ++ +L P+ + + + H V++
Sbjct: 312 SGVLSLEPVGSSHNSGLTTQDSRLETQNSELKTPDPVTERRHTYEANAFIGGHMVPRVVV 371
Query: 418 SVSLDQLKAPELLYKS--LAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLAL----- 470
+S LK P +L + L ++L+ + + L +LPS + L
Sbjct: 372 DLSAKNLKDPAVLNDAGYLYSELLDKYNMAEQSVDFVYLANQLPSFNFPGNLKQLYNYET 431
Query: 471 -KRLVD-ISMGVITPLSEQLT---KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGD 525
K L D + + LSE ++ + +V+V +L T + LLP LV L
Sbjct: 432 WKTLTDKTNCHPVYNLSEYISATERDYALNLVIVKPGDLETDDFGLLPLNNTLVFVLE-- 489
Query: 526 ESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGI 585
D I +Q R F L E L+ PVI +P
Sbjct: 490 ------------------------TDAINGMQDQRGFFFKLQELGLDVPVIIKRTYPENE 525
Query: 586 HR--------------DDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQ 631
L + A T++GALLVDGLGDG+ ++AP + T+F +LQ
Sbjct: 526 FDLSKYGDITSPEEPVSKLQLYAATDMGALLVDGLGDGIWIDAPSIPVKTITSTAFGILQ 585
Query: 632 GV 633
Sbjct: 586 AT 587
>gi|83273569|ref|XP_729456.1| (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Plasmodium
yoelii yoelii 17XNL]
gi|23487311|gb|EAA21021.1| GcpE [Plasmodium yoelii yoelii]
Length = 826
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 231/634 (36%), Positives = 367/634 (57%), Gaps = 51/634 (8%)
Query: 50 SSNSSSD---IAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRV 106
SS+ +SD I +++ + L+ +KYCE + R TR V +GN+ IG + I +
Sbjct: 88 SSDENSDYESIQKIETDEDKYNLIKNIKKYCECTKRYKRLPTREVKIGNIKIGGNNRISI 147
Query: 107 QTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA 166
QTMT+ DT++V V ++ R D GADLVR+TVQG +E +A + IK+ L+ +N IPLVA
Sbjct: 148 QTMTSCDTRNVEECVNQIKRCKDLGADLVRLTVQGVQEVEASYRIKDMLLSQNITIPLVA 207
Query: 167 DIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEK 226
DIHF P +AL AE +DKIRVNPGN+ D R ++ Y E++ I+E F PL+EK
Sbjct: 208 DIHFNPKIALMAAEVYDKIRVNPGNYVDGRKKWVDKVYKKKEFEDGKLFIKEKFVPLIEK 267
Query: 227 CKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286
CK+ RA+RIGTNHGSLS R++SYYGD+P GMVESAFEF+ +C + +F N ++SMKASN
Sbjct: 268 CKQLNRAIRIGTNHGSLSSRMLSYYGDTPLGMVESAFEFSDLCIENNFFNIVYSMKASNA 327
Query: 287 VVMVQAYRLLVAEMYVHGWD--YPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRV 344
VM+Q+YRLLVA+ Y G D +P+HLGVTEAG G++GR+KS +GIG+LL DG+GDTIR+
Sbjct: 328 YVMIQSYRLLVAKQYEKGNDIFFPIHLGVTEAGFGDNGRIKSYLGIGSLLYDGIGDTIRI 387
Query: 345 SLTEPPEKEIDPCRRL-ANLGMRAAEL-QQGVAPFEEKHR------------------HY 384
SLTE P +E+ PC++L NL R QQ F E+++ H
Sbjct: 388 SLTEDPWEELHPCKKLIENLKKRIFYTDQQNSNYFTEQNKENNNATTNRNNRYTTLDFHN 447
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
F+ R+ ++++ V + VLH + ++ +V++ +L+ ++K L +L
Sbjct: 448 FNETFRNFNNIVKRQ--VVKKKNVLHEECTIGNAVTVKELEDSLQIFKDLNLELDKNGNL 505
Query: 445 KDLA-TVDSILLRELPSVDDHDARLALKRLVDISMGVIT---PLSEQLTKPLP------- 493
K A T D I++ + ++ + A+ ++++L++ + V+ P S +L K L
Sbjct: 506 KKGAKTTDIIIINDFENLTNV-AKKSVEKLMEAGLHVLVEYGPKSVELIKNLKVNELNKQ 564
Query: 494 ---HAMVLVNLQEL-----STGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHD 545
+ L ++ +L + G + +G ++ L G E + +E +KD++ +
Sbjct: 565 NILYYSTLTDILDLLEKNKTDGIEQNNVKGYAII--LNGKEDIKVIEKIKDLNPQPLFFI 622
Query: 546 LPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDG 605
L +++ V RRL E L +++ P IH+ + I+ DD+++ + VG L+D
Sbjct: 623 LK-SDNIYEHVLVTRRLNEILHTLDIDIPYIHYANIDSNIY-DDILVNSTVYVGTCLIDL 680
Query: 606 LGDGLLLEAPGQDFDFLRDTSFNLLQGVCLMSIM 639
+GDGL++ + ++ + + V L S +
Sbjct: 681 MGDGLIVNVTDNNITAKKEQNEQIKTRVALNSFL 714
>gi|68076781|ref|XP_680310.1| GcpE protein [Plasmodium berghei strain ANKA]
gi|56501223|emb|CAH98435.1| GcpE protein, putative [Plasmodium berghei]
Length = 819
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 231/653 (35%), Positives = 361/653 (55%), Gaps = 60/653 (9%)
Query: 34 FRKFKSGRRRFTVIRNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMV 93
F K K ++ + +N I +++ + L+ +KYCE + R TR V +
Sbjct: 68 FGKIKKKMNFNSLSSDENNDYESIKKIETDEDKYNLIKNIKKYCECTKRYKRLPTREVKI 127
Query: 94 GNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKN 153
GN+ IG + I +QTMT+ DT++V V ++ R GADLVR+TVQG +E +A + IK+
Sbjct: 128 GNIKIGGNNKISIQTMTSCDTRNVEECVNQIKRCKGLGADLVRLTVQGVQEVEASYRIKD 187
Query: 154 SLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKEL 213
L+ +N IPLVADIHF P +AL AE FDKIRVNPGN+ D R ++ Y E++
Sbjct: 188 MLLSQNITIPLVADIHFNPKIALMAAEVFDKIRVNPGNYVDGRKKWVDKVYKKKEFEDGK 247
Query: 214 QHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD 273
I+E F PL+EKCK+ RA+RIGTNHGSLS R++SYYGD+P GMVESAFEF+ +C + +
Sbjct: 248 LFIKEKFVPLIEKCKQLNRAIRIGTNHGSLSSRMLSYYGDTPLGMVESAFEFSDLCIENN 307
Query: 274 FHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD--YPLHLGVTEAGEGEDGRMKSAIGIG 331
F N ++SMKASN VM+Q+YRLLVA+ Y G D +P+HLGVTEAG G++GR+KS +GIG
Sbjct: 308 FFNIVYSMKASNAYVMIQSYRLLVAKQYEKGNDVLFPIHLGVTEAGFGDNGRIKSYLGIG 367
Query: 332 TLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYFDFQRRS 391
+LL DG+GDTIR+SLTE P +E+ PC++L L++ + +++ YF Q +
Sbjct: 368 SLLYDGIGDTIRISLTEDPWEELHPCKKL------IENLKKRIFYTDQQDSSYFTDQNKG 421
Query: 392 GQLPIQKEGEE---VDYRGV---------------------LHRDGSVLMSVSLDQLKAP 427
PI K +D+ +H + ++ +V++ +L+
Sbjct: 422 KNNPITKRNNRYTTLDFHNFNETFRNFNNIVKRKVVKKKNVMHEECTIGNAVTVKELEDS 481
Query: 428 ELLYKSLAAKLVVGMPFKDLA-TVDSILLRELPSVDDHDARLALKRLVDISMGVIT---P 483
++K L +L K A T D I++ + ++ + A+ ++++L++ + V+ P
Sbjct: 482 LQIFKDLNLELDKNGNLKKGAKTTDIIIINDFENLTNA-AKKSVEKLMEAGLHVLIEYGP 540
Query: 484 LSEQLTKPL----PHAMVLVNLQELSTGAY--KLLPEGTR----------LVVSLRGDES 527
S +L K L P+ N+ ST Y LL + + ++ L G E
Sbjct: 541 KSVELLKNLKVNEPNKQ---NILYYSTLTYILDLLEKNNKDGIEHNNVKGYIIILNGKED 597
Query: 528 YEELEILKDIDATMILHDLPFNEDKI-GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIH 586
+ +E +KD++ + L D I V RRL E L N++ P IH+ + +
Sbjct: 598 IKAIEKIKDLNPQPLFFILK--PDNIYEHVLVTRRLNEILHTLNIDIPYIHYANIDSN-N 654
Query: 587 RDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLMSIM 639
DD+++ + VG L+D +GDGL++ + ++ + + V L S +
Sbjct: 655 YDDILVNSAVYVGTCLIDLMGDGLIVNVTDNNITAKKEQNEQIKTRVALNSFL 707
>gi|325104952|ref|YP_004274606.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pedobacter
saltans DSM 12145]
gi|324973800|gb|ADY52784.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pedobacter
saltans DSM 12145]
Length = 659
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 240/595 (40%), Positives = 326/595 (54%), Gaps = 84/595 (14%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q+YC SI + R +T V VGN+ +G+ +PIR+Q+MTT DT D G+V + +R+ D G +
Sbjct: 9 QRYCNSITEYSRFETVEVKVGNLLLGAHNPIRLQSMTTVDTMDTEGSVAQSIRMIDAGCE 68
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
LVRIT +EA I+ L K Y PLVADIHF P+ A A+ +K+RVNPGN+A
Sbjct: 69 LVRITAPSIKEAKNLANIRKELDAKGYPTPLVADIHFTPNAAEEAAKHIEKVRVNPGNYA 128
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FE++ YT + Y+KEL+ I+ F+PLV+ CK+ G A+RIGTNHGSLSDRIMS+YGD
Sbjct: 129 DKK-KFEEINYTPEAYKKELERIKSKFAPLVQICKENGTAMRIGTNHGSLSDRIMSWYGD 187
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P+GMVESA EF RICR+LD+H + SMK+SNP VMVQAYRLLV M +YPLHLGV
Sbjct: 188 TPKGMVESAMEFIRICRELDYHQLVVSMKSSNPQVMVQAYRLLVHTMMQENMNYPLHLGV 247
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQ-- 371
TEAG+GEDGR+KSA+GIGTLL+DGLGDTIRVSLTE PE EI R LA +L
Sbjct: 248 TEAGDGEDGRIKSAVGIGTLLEDGLGDTIRVSLTEEPEFEIPVARVLAERYHEREKLDTE 307
Query: 372 ----------QGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSL 421
Q +PFE + R + G H+ V++ +S
Sbjct: 308 INGAGDVIVPQDFSPFEYRKRESTELNTFIGG----------------HQVPRVILDISK 351
Query: 422 DQLKAPELL------YKSLAAKLVVGMPFKDLATVDSILLRELPSVD---------DHDA 466
LK P +L Y ++ K +G D A L +LPS + D+
Sbjct: 352 QNLKDPFVLADAGYVYSAVLDKYNMGDQSIDFA----YLGDQLPSFNFPGNLKQLYDYST 407
Query: 467 RLALKRLVDISMGVITPLSEQLTKPLPHA---MVLVNLQELSTGAYKLLPEGTRLVVSLR 523
L L++ + + L E ++ A +V V+ L T + +P LV L
Sbjct: 408 WLTLQKKYNCH--PLFTLEEYVSAQKRDAALNLVRVSRSNLYTDDFANIPFDHTLVFVLE 465
Query: 524 GDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVI--HHIQF 581
DE + + R F L E +N PVI +F
Sbjct: 466 TDE--------------------------VHGMADQRAFFFKLLEAGINTPVIVKRSYRF 499
Query: 582 PNGIHRD-DLV--IGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGV 633
+ +D DL + A T++GALL+DG GDG+ ++AP F T+F +LQ
Sbjct: 500 GDANQKDIDLKTQLYAATDLGALLLDGFGDGIWIDAPQISLKFNVSTAFGILQAT 554
>gi|387791950|ref|YP_006257015.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Solitalea
canadensis DSM 3403]
gi|379654783|gb|AFD07839.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Solitalea
canadensis DSM 3403]
Length = 670
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 242/596 (40%), Positives = 335/596 (56%), Gaps = 49/596 (8%)
Query: 52 NSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTT 111
NS+ DI +++ + KYC S+ R TR V +G++A+G+ HPIR+Q+MTT
Sbjct: 2 NSAVDINQIKAL---------KGKYCNSLTTYSRFITREVTIGDIAMGAHHPIRIQSMTT 52
Query: 112 NDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA 171
DT D TVE+ +R+ D G + VRIT +EA EIK L + YN+PL+ADIHF
Sbjct: 53 TDTMDTLATVEQTIRMVDAGCEYVRITAPSMKEAQNLAEIKKELRHRGYNVPLIADIHFT 112
Query: 172 PSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG 231
P+ A A +K+RVNPGN+ D++ +F+Q++YTD EY++E++ I + FSPLV CK+YG
Sbjct: 113 PNAAELAARIVEKVRVNPGNYIDKK-KFQQIDYTDLEYEQEVERIRKRFSPLVSICKEYG 171
Query: 232 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQ 291
A+RIGTNHGSLSDRIMS YGD+P GMVESA EF RIC LD+HN + SMKASNP VMVQ
Sbjct: 172 TAMRIGTNHGSLSDRIMSRYGDTPIGMVESAMEFIRICSDLDYHNLVISMKASNPKVMVQ 231
Query: 292 AYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPE 351
AYR+LV +M G +YPLHLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDTIRVSLTE PE
Sbjct: 232 AYRMLVEKMVAEGMNYPLHLGVTEAGDGEDGRIKSAVGIGTLLEDGLGDTIRVSLTEEPE 291
Query: 352 KEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLH 410
E + LA+ R + Q + F + +F S Q +++ EV G H
Sbjct: 292 YEAPVAKALADRYAKRTHLIDQSASEFIPDVQFPSNFDPYSYQ---RRKTHEVQNIGG-H 347
Query: 411 RDGSVLMSVSLDQLKAPELL------YKSLAAKLVVGMPFKDLATV-DSILLRELPSVDD 463
V++ +S LK P +L Y ++ K + D A + DS+ P
Sbjct: 348 NVPRVIVDLSQQNLKDPFVLSSIGYNYSAVLDKYNLTEQTADFAYLGDSLPSFSFPG--- 404
Query: 464 HDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELST------GAYKLLPEGTR 517
LK+L + S + +Q P+ +N +E T A +L E T
Sbjct: 405 -----NLKQLYNYSTWK-SLKDQQNAHPVFSVEEYINAEERDTQLNFIKAAISVLFEST- 457
Query: 518 LVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIH 577
++ Y D T++ L + I + R+ L L+ PVI
Sbjct: 458 -------EQIYNAFIKALSADKTLV---LILETNSIHGMAEQRQFIFDLMIQQLDIPVII 507
Query: 578 HIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGV 633
+ + + +D + A T+VGALL DGLGDGL ++ + T+F +LQ
Sbjct: 508 KRIYAD-VSEEDFQLEASTDVGALLTDGLGDGLWIQCDSVSSKVINSTAFGILQAT 562
>gi|124802547|ref|XP_001347505.1| GcpE protein [Plasmodium falciparum 3D7]
gi|13094969|gb|AAK12103.1|AF323928_1 GcpE [Plasmodium falciparum]
gi|23495086|gb|AAN35418.1|AE014832_40 GcpE protein [Plasmodium falciparum 3D7]
Length = 824
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/611 (35%), Positives = 354/611 (57%), Gaps = 54/611 (8%)
Query: 44 FTVIRNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHP 103
++++ NSS + E ++ +KYCE K R TR V++GNV IG +
Sbjct: 77 YSLLNEEGNSSKKEYKNLKDEEKYNIIQNIKKYCECTKKYKRLPTREVVIGNVKIGGNNK 136
Query: 104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIP 163
I +QTM + DT++V V ++ + D GAD+VR+TVQG +EA A + IK L+ +N NIP
Sbjct: 137 IAIQTMASCDTRNVEECVYQIRKCKDLGADIVRLTVQGVQEAQASYHIKEKLLSENVNIP 196
Query: 164 LVADIHFAPSVALRVAECFDKIRVNPGNFAD-RRAQFEQLEYTDDEYQKELQHIEEVFSP 222
LVADIHF P +AL A+ F+KIRVNPGN+ D R+ +++ T +E+ + I+E F P
Sbjct: 197 LVADIHFNPKIALMAADVFEKIRVNPGNYVDGRKKWIDKVYKTKEEFDEGKLFIKEKFVP 256
Query: 223 LVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMK 282
L+EKCK+ RA+RIGTNHGSLS R++SYYGD+P GMVESAFEF+ +C + +F+N +FSMK
Sbjct: 257 LIEKCKRLNRAIRIGTNHGSLSSRVLSYYGDTPLGMVESAFEFSDLCIENNFYNLVFSMK 316
Query: 283 ASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTI 342
ASN VM+Q+YRLLV++ Y +P+HLGVTEAG G++GR+KS +GIG+LL DG+GDTI
Sbjct: 317 ASNAYVMIQSYRLLVSKQYERNMMFPIHLGVTEAGFGDNGRIKSYLGIGSLLYDGIGDTI 376
Query: 343 RVSLTEPPEKEIDPCRRLA-NLGMRA---------AELQ------QGVAPFEEKHRHYFD 386
R+SLTE P +E+ PC++L NL R EL+ + + FEE +R++ +
Sbjct: 377 RISLTEDPWEELTPCKKLVENLKKRIFYNENFKEDNELKNNEMDTKNLLNFEENYRNFNN 436
Query: 387 FQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKD 446
++R+ ++K VLH + ++ V++ +L+ ++K L ++ K
Sbjct: 437 IKKRN----VEKNN------NVLHEECTIGNVVTIKELEDSLQIFKDLNLEVDSNGNLKK 486
Query: 447 LA-TVDSILLRELPSVDDHDARLALKRLVDISMGVITPLS----EQLTKPLPHA------ 495
A T D +++ + ++ + + + +L+ + + ++ E + K P+
Sbjct: 487 GAKTTDMVIINDFHNITNLGKK-TVDKLMQVGINIVVQYEPHNIEFIEKMEPNNDNNNNN 545
Query: 496 -----MVLVNLQELSTGAYKLL----PEGTRLVVSLRGDESYEELEILKDIDATMILHDL 546
+ V+++ + + K + +G L+ L G E + ++ +K+++ + +
Sbjct: 546 NNNNILFYVDIKNIMNSSEKNIKLSNSKGYGLI--LNGKEDIQTIKKIKELNRRPLF--I 601
Query: 547 PFNEDKI-GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDG 605
D I V RR+ E L N+N P IH++ N + DD+++ + G+ L+D
Sbjct: 602 LLKSDNIYEHVLITRRINELLQSLNINIPYIHYVDI-NSNNYDDILVNSTLYAGSCLMDL 660
Query: 606 LGDGLLLEAPG 616
+GDGL++
Sbjct: 661 MGDGLIVNVTN 671
>gi|300772120|ref|ZP_07081990.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sphingobacterium spiritivorum ATCC 33861]
gi|300760423|gb|EFK57249.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sphingobacterium spiritivorum ATCC 33861]
Length = 675
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 235/580 (40%), Positives = 322/580 (55%), Gaps = 51/580 (8%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S R TR V +G++ +G +PIR+Q+MTT DT D G+VE+ +R+ D G + V
Sbjct: 16 YCNSKTDYSRWVTREVNIGDIPMGGNNPIRIQSMTTIDTMDTMGSVEQTIRMVDAGCEYV 75
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA+ IK L + YN+PLVADIHF P+ A A +K+R+NPGN+AD+
Sbjct: 76 RITAPSIKEAENLANIKKELRNRGYNVPLVADIHFTPNAAEVAARIVEKVRINPGNYADK 135
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F+QL Y+ DEYQ EL I + F+PLV CK+YG A+RIGTNHGSLSDRIMS+YGD+P
Sbjct: 136 K-KFDQLSYSADEYQAELDRIYKKFTPLVSICKEYGTAMRIGTNHGSLSDRIMSHYGDTP 194
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA EF RIC L+F+N SMK+SNP VMVQAYR+LV +M + +YPLHLGVTE
Sbjct: 195 EGMVESALEFIRICEDLNFYNLTISMKSSNPQVMVQAYRMLVEKMVIENMNYPLHLGVTE 254
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGV 374
AG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PEKE L N RA LQ
Sbjct: 255 AGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEEPEKEAPVAIALVNRYSKRAKMLQDAT 314
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELL---- 430
E Q + E EV+ V++ +S LK P +L
Sbjct: 315 TQSREI------IQLNPSSETVAYESREVNTFIGGSLVPRVIVDISTSNLKDPNILTATG 368
Query: 431 --YKSLAAKLVVGMPFKDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQ 487
Y L K +G +VD + L +LPS LK+L +
Sbjct: 369 YRYDILNDKYHMGE-----QSVDFVFLGDQLPS---FTMPGNLKQLYN--------YKTW 412
Query: 488 LTKPLPHAMVLV-NLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDL 546
LT P + V +L++ + + K + ++ ++ ++ E+ ID T++
Sbjct: 413 LTIANPTNIHPVFDLEQFNAASRK---DPVLNLIYIKNNDLESEIFGNSAIDNTVVFI-- 467
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFP----NGIHRD---------DLVIG 593
D I + R+ F L E L+ PVI +P +G D + +
Sbjct: 468 -LETDHIHGMADQRQFFANLQEIGLDNPVIIKRSYPAEEFSGPVGDIMNPEEPISKIQLY 526
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGV 633
A T++GALL+D LG G+ +++P D L SF +LQ
Sbjct: 527 AATDLGALLIDKLGSGIWVDSPATPIDRLVSLSFGILQAT 566
>gi|70947368|ref|XP_743307.1| GcpE protein [Plasmodium chabaudi chabaudi]
gi|56522740|emb|CAH81161.1| GcpE protein, putative [Plasmodium chabaudi chabaudi]
Length = 813
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 227/630 (36%), Positives = 360/630 (57%), Gaps = 51/630 (8%)
Query: 34 FRKFKSGRRRFTVIRNSSNSSSD-----IAELQPASEGSPLLVPRQKYCESIHKTVRRKT 88
F K GRR+ + NS +S + I +++ + L+ +KYCE + R T
Sbjct: 57 FGKSLHGRRKKKMNFNSLSSDENGDYENIKQIKTDEDXYNLIKDIKKYCECTKRYKRLPT 116
Query: 89 RTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADAC 148
V +GNV IG + I +QTMT+ DT++V V ++ + + GADLVR+TVQG +E +A
Sbjct: 117 HEVQIGNVKIGGNNKIAIQTMTSCDTRNVEECVNQIKKCKELGADLVRLTVQGVQEVEAS 176
Query: 149 FEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDE 208
+ IK+ L+ +N IPLVADIHF P +AL A+ +DKIRVNPGN+ D R ++ Y DE
Sbjct: 177 YRIKDILLSQNITIPLVADIHFNPKIALMAADVYDKIRVNPGNYVDGRKKWVDKVYEKDE 236
Query: 209 YQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARI 268
+++ I+E F PL+EKCK+ RA+RIGTNHGSLS R++SYYGD+P GMVESAFEF+ +
Sbjct: 237 FEEGKLFIKEKFVPLIEKCKRLNRAMRIGTNHGSLSSRMLSYYGDTPLGMVESAFEFSDL 296
Query: 269 CRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD--YPLHLGVTEAGEGEDGRMKS 326
C + +F N ++SMKASN VM+Q+YRLLVA+ Y G D +P+HLGVTEAG G++GR+KS
Sbjct: 297 CIENNFFNVVYSMKASNAYVMIQSYRLLVAKQYEKGNDLMFPIHLGVTEAGFGDNGRIKS 356
Query: 327 AIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL-ANLGMRAAEL-QQGVAPFEEKHR-- 382
+GIG+LL DG+GDTIR+SLTE P +E++PC++L NL R QQ + ++ +
Sbjct: 357 YLGIGSLLYDGIGDTIRISLTEDPWEELNPCKKLIGNLKKRIFYTDQQDSSYLADQTKEN 416
Query: 383 ----------------HYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKA 426
H F+ R +++ V + VLH + ++ V++ +L+
Sbjct: 417 NNTITNRNNRYTTLDFHNFNETFRDFNNIVKR--NVVKKKNVLHEECTIGNVVTVKELED 474
Query: 427 PELLYKSLAAKLVVGMPFKDLA-TVDSILLRELPSVDDHDARLALKRLVDISMGVIT--- 482
++K L +L K A T D +++ + ++ + A+ +++L++ S+ +
Sbjct: 475 SLQIFKDLNLELDKNGNLKKGAKTTDIVIINDFENLTNV-AKKTVEKLMEASLHALVDYG 533
Query: 483 PLSEQLTKPL----PHAMVLVNLQELSTGAYKLLPEGTR----------LVVSLRGDESY 528
P S +L K L P+ ++ L+ LL + + + L G E
Sbjct: 534 PKSVELIKNLKVNEPNNQNILYYSTLA-DMLDLLEKNNKDGIEQNNVKGYAIVLNGKEDI 592
Query: 529 EELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRD 588
+ +E +KD++ + L +++ V RRL E L N++ P IH+ + ++ D
Sbjct: 593 KVIEKIKDLNPQPLFFILK-SDNIYEHVLVTRRLNEILHTLNIDIPYIHYANIDSNVY-D 650
Query: 589 DLVIGAGTNVGALLVDGLGDGLLLEAPGQD 618
D+++ + VG L+D +GDGL++ +
Sbjct: 651 DILVNSTVYVGTCLIDLMGDGLIINVTDNN 680
>gi|227536149|ref|ZP_03966198.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sphingobacterium spiritivorum ATCC 33300]
gi|227244046|gb|EEI94061.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sphingobacterium spiritivorum ATCC 33300]
Length = 675
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 234/580 (40%), Positives = 325/580 (56%), Gaps = 51/580 (8%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S R TR V +G++ +G +PIR+Q+MTT DT D G+VE+ +R+ D G + V
Sbjct: 16 YCNSKTDYSRWVTREVNIGDIPMGGNNPIRIQSMTTIDTMDTMGSVEQTIRMVDAGCEYV 75
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA+ IK L + YN+PLVADIHF P+ A A +K+R+NPGN+AD+
Sbjct: 76 RITAPSIKEAENLANIKKELRNRGYNVPLVADIHFTPNAAEVAARIVEKVRINPGNYADK 135
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F+QL Y+ +EYQ EL I + F+PLV CK+YG A+RIGTNHGSLSDRIMS+YGD+P
Sbjct: 136 K-KFDQLSYSANEYQAELDRIYKKFAPLVSICKEYGTAMRIGTNHGSLSDRIMSHYGDTP 194
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA EF RIC L+F+N SMK+SNP VMVQAYR+LV +M + +YPLHLGVTE
Sbjct: 195 EGMVESALEFIRICEDLNFYNLTISMKSSNPQVMVQAYRMLVEKMVIENMNYPLHLGVTE 254
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGV 374
AG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PEKE L N RA LQ+
Sbjct: 255 AGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEEPEKEAPVAIALVNRYSKRAKMLQEAA 314
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELL---- 430
E Q + E +EV+ V++ +S LK P +L
Sbjct: 315 IQSREI------IQLNPSSETVAYESKEVNTFIGGSLVPRVIVDISASNLKDPNILTATG 368
Query: 431 --YKSLAAKLVVGMPFKDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQ 487
Y L K +G +VD + L +LPS LK+L + +
Sbjct: 369 YRYDILNDKYHMGE-----QSVDFVFLGDQLPS---FTMPGNLKQLYN--------YNTW 412
Query: 488 LTKPLPHAMVLV-NLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDL 546
LT P + V +L++ + + K + ++ ++ ++ E+ ID T++
Sbjct: 413 LTIANPTNIHPVFDLEQFNAASRK---DPVLNLIYIKNNDLESEIFGNSAIDNTVV---F 466
Query: 547 PFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFP----NGIHRD---------DLVIG 593
D I + R+ F L E L+ PVI +P +G D + +
Sbjct: 467 VLETDHIHGMADQRQFFANLQEIGLDNPVIIKRSYPSEEFSGPVGDIMNPEEPISKIQLY 526
Query: 594 AGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGV 633
A T++GALL+D LG G+ +++P D L SF +LQ
Sbjct: 527 AATDLGALLIDKLGSGIWVDSPATPIDKLVSLSFGILQAT 566
>gi|149278639|ref|ZP_01884775.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pedobacter
sp. BAL39]
gi|149230634|gb|EDM36017.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pedobacter
sp. BAL39]
Length = 618
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 234/562 (41%), Positives = 319/562 (56%), Gaps = 73/562 (12%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MTT DT + TVE+ +R+ + G + VRIT +EAD IK L
Sbjct: 1 MGGLNPIRIQSMTTTDTMNTIATVEQTIRMVESGCEYVRITAPSMKEADNLANIKKELRY 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
+ YN+PLVADIHF P+ A A +K+RVNPGN+AD++ +FE +EYT YQ EL+ I
Sbjct: 61 RGYNVPLVADIHFTPNAAEAAARIVEKVRVNPGNYADKK-KFENIEYTQSAYQAELERIY 119
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F+PLV CK+YG A+RIGTNHGSLSDRIMS+YGD+PRGMVESA EF R+C L+++N
Sbjct: 120 KKFTPLVNICKEYGTAMRIGTNHGSLSDRIMSHYGDTPRGMVESAMEFIRMCEDLNYYNL 179
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ SMKASN VMVQAYRLLV M G +YPLHLGVTEAG+GEDGR+KSA+GIGTLL+DG
Sbjct: 180 VISMKASNTQVMVQAYRLLVETMVKEGMNYPLHLGVTEAGDGEDGRIKSAVGIGTLLEDG 239
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVA----PFEEKHRHYFDFQRRSG 392
LGDTIRVSLTE PE E R +A RA ++ Q A +E F + RR+
Sbjct: 240 LGDTIRVSLTEDPEFEAPVARAMAQRYEARAMQMDQQPAREILNIQELPYTPFAYNRRT- 298
Query: 393 QLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLA--TV 450
+P+Q G H V++ VS + LK P L ++ + G+ ++
Sbjct: 299 TVPVQHIGG--------HHHPVVMIDVSKENLKDPFFL-NAVGYQYSAGLDKYNMTDQAC 349
Query: 451 DSILLRE-LPS---------VDDHDARLALKR------LVDIS--MGVITPLSEQLTKPL 492
D + L + LPS V ++D L LK L+ S GV EQL
Sbjct: 350 DLVYLGDALPSFSFPGNLKQVYNYDTWLGLKDKNNCHPLLSFSEYQGVALK-DEQLN--- 405
Query: 493 PHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDK 552
+V +N +E S + +L G ++++ L E++
Sbjct: 406 ---LVQLNAEEASGLDFSVL--GEKVILVLTTSEAH------------------------ 436
Query: 553 IGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL 612
+ A R LF L L PVI +P+ ++ DDL++ A T++GALL DG+GDG+ +
Sbjct: 437 --GMAAQRALFVELMRQELQIPVIIKRAYPS-VNADDLMLYAATDLGALLTDGMGDGVWI 493
Query: 613 EAPGQ-DFDFLRDTSFNLLQGV 633
A + TSF +LQ
Sbjct: 494 TADETVGLGLVNSTSFGILQAT 515
>gi|338209922|ref|YP_004653969.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Runella
slithyformis DSM 19594]
gi|336303735|gb|AEI46837.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Runella
slithyformis DSM 19594]
Length = 667
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 225/540 (41%), Positives = 311/540 (57%), Gaps = 29/540 (5%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y S+ + +RRKT TV +G++ +GSE+PIRVQ+MTT DT + G++E+V+R+ + G + V
Sbjct: 19 YSRSLTEYLRRKTITVKIGDIPLGSEYPIRVQSMTTVDTMNTEGSIEQVIRMVESGCEYV 78
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA I+ L + Y++PL+ADIHF P+ A A +K+R+NPGN+AD+
Sbjct: 79 RITAPSVKEAQNLENIRKGLRARGYSVPLIADIHFTPNAAELAARIVEKVRINPGNYADK 138
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE ++YT+DEYQ+EL+ I E F PL++ CK+YG A+RIGTNHGSLSDRIMS YGDSP
Sbjct: 139 K-RFELIDYTEDEYQRELERIREKFIPLLKICKEYGTAMRIGTNHGSLSDRIMSRYGDSP 197
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVT 314
GMVESA EF RIC + ++++ + SMK+SNP+VMV+AYRLLV + G YPLHLGVT
Sbjct: 198 LGMVESALEFLRICEEFNYYDVVLSMKSSNPLVMVEAYRLLVNRLDAEGLKPYPLHLGVT 257
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGEGEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E L N AE +
Sbjct: 258 EAGEGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAAALINRYTHRAERTTPI 317
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
P E H F + RR + + G V + D S + + L++ Y +
Sbjct: 318 RPLEASPIHPFQYSRRKTKEVLNFGGGNVPR---VIADFSNIEVTRYEDLRSVGHFYLPV 374
Query: 435 AAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPH 494
K D+ VD + PS + LK +VD V L E+ H
Sbjct: 375 PDK----WKMNDIG-VDYLYTGARPS--SFMLPMGLKEIVDYE--VWKTLRER-----EH 420
Query: 495 AMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIG 554
+ L L E K ++ + +E L D A ++L D
Sbjct: 421 SFPLFTLAEFEAAEEK--SHALNFIIIDAATQITKEQ--LADTPAVLVLQT-----DNAH 471
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
+ A RR L ++ PV+ + + D+L + A T+ G LLVDGLGDGL+L A
Sbjct: 472 AMPALRRCMIDLIAQGIDCPVVIRRTYSTE-NTDELSLFAATDCGGLLVDGLGDGLMLSA 530
>gi|255533339|ref|YP_003093711.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pedobacter
heparinus DSM 2366]
gi|255346323|gb|ACU05649.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pedobacter
heparinus DSM 2366]
Length = 644
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 238/570 (41%), Positives = 323/570 (56%), Gaps = 60/570 (10%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R TR V +G+V +G +PIR+Q+MTT DT D GTVE+ +R+ + G + VRIT +E
Sbjct: 9 RFLTREVAIGDVPMGGLNPIRIQSMTTTDTMDTIGTVEQTIRMVNSGCEYVRITAPSMKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ IK L + YN+PLVADIHF P+ A A +K+RVNPGN+AD++ +FE +EY
Sbjct: 69 AENLANIKKELRLRGYNVPLVADIHFTPNAAEAAARIVEKVRVNPGNYADKK-RFENIEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
T YQ EL I + F+PLV+ CK+YG A+RIGTNHGSLSDRIMS+YGD+PRGMVESA E
Sbjct: 128 THQAYQAELDRIYKKFTPLVKICKEYGTAMRIGTNHGSLSDRIMSHYGDTPRGMVESAME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F R+C L+++N + SMKASN VMVQAYRLLV M G +YPLHLGVTEAG+GEDGR+
Sbjct: 188 FIRMCEDLNYYNLVISMKASNTQVMVQAYRLLVETMVKEGMNYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHR-- 382
KSA+GIGTLL+DGLGDTIRVSLTE PE E + LA + A G F E
Sbjct: 248 KSAVGIGTLLEDGLGDTIRVSLTEDPEFEAPVAKALAMRYEKRALDLYGKMLFSETKTIV 307
Query: 383 ------HYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAA 436
F++QRR +P+Q G H +V++ VS + LK P L ++
Sbjct: 308 PGQLPYSPFEYQRRV-TVPVQHIGG--------HFHPAVMLDVSHENLKDPYFL-AAVGY 357
Query: 437 KLVVGMPFKDLA--TVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLP 493
+ G+ ++A D + L +LPS LK++ + S
Sbjct: 358 QYSAGLDKYNMADQACDIVYLGDQLPSFSFPG---NLKQVYNYS---------------- 398
Query: 494 HAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKI 553
++L++ + LL L V L E+L ++K + DL +DK+
Sbjct: 399 ---TWLSLKD-KNNCHPLLSYDEYLSVELHD----EQLNLVKITAENALQTDLSALKDKV 450
Query: 554 ---------GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVD 604
V A R F L E L PVI + ++ DDL++ A T++GALL D
Sbjct: 451 VLVLETSSLNGVAAQRAFFNALIEKGLQIPVIIKRSY-TAVNTDDLMLYAATDMGALLTD 509
Query: 605 GLGDGLLLEAPG-QDFDFLRDTSFNLLQGV 633
G+GDG+ ++A + TSF +LQ
Sbjct: 510 GMGDGVWIDADALLGLSLINATSFGILQAT 539
>gi|409100369|ref|ZP_11220393.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pedobacter
agri PB92]
Length = 660
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 236/572 (41%), Positives = 322/572 (56%), Gaps = 42/572 (7%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+YC S+ + R TR V +G++A+G +PIR+Q+MTT DT D GTVE+ +R+ + G +
Sbjct: 13 EYCNSLTQYSRFLTREVKIGDIALGGHNPIRIQSMTTTDTMDTIGTVEQTIRMVESGCEY 72
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRIT +EA+ IK L + Y++PL+ADIHF P+ A A +K+RVNPGN+AD
Sbjct: 73 VRITAPSIKEAENLANIKKELRFRGYDVPLIADIHFTPNAAEMAARIVEKVRVNPGNYAD 132
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +FE LEYT D Y EL+ I + F PL++ CK+YG A+RIGTNHGSLSDRIMS+YGD+
Sbjct: 133 KK-KFENLEYTQDAYTAELERINKKFVPLIKICKEYGTAMRIGTNHGSLSDRIMSHYGDT 191
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
PRGMVESA EF R+C +++N + SMKASN VMVQAYRLLV M G +YPLHLGVT
Sbjct: 192 PRGMVESAMEFIRMCEAENYYNLVISMKASNTQVMVQAYRLLVETMVKEGMNYPLHLGVT 251
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+GEDGR+KSA+GIGTLL+DGLGDTIRVSLTE PE E + LA+ + AE G+
Sbjct: 252 EAGDGEDGRIKSAVGIGTLLEDGLGDTIRVSLTEDPEFEAPVAKALADRYVNRAE---GL 308
Query: 375 APFEEKHRHYFDFQRRSGQLPI-------QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAP 427
E + + GQ P ++ E V + G H V++ VS + LK P
Sbjct: 309 KLKVESNTVVCHPELVEGQSPTYNPYQYSRRTTESVQHIGG-HHHPVVMIDVSKENLKDP 367
Query: 428 ELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQ 487
L ++ G+ +LA +L + DH + + T L
Sbjct: 368 YFL-NAIGYNYSAGLDKYNLADQAC----DLAFLGDHLPSFSFPGNLKQVYNYQTWLKLH 422
Query: 488 LTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLP 547
K H L +L E + A K DE +EI + LH L
Sbjct: 423 -DKNNCHP--LFSLDEFNEAAVK--------------DEHLNFVEIDAAHFNHLSLHQL- 464
Query: 548 FNEDKIGRVQAA------RRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGAL 601
N + + A+ R F L E N+ PVI + + ++ D L + A T+ GAL
Sbjct: 465 INVVFVLKTTASHGMAEQRAFFVALQERNIQTPVIIKRTYED-LNADSLQLYASTDFGAL 523
Query: 602 LVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGV 633
DG GDG+ ++A GQ+ + TSF +LQ
Sbjct: 524 FTDGFGDGIWIDASGQNLALINSTSFGILQAT 555
>gi|326799610|ref|YP_004317429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sphingobacterium sp. 21]
gi|326550374|gb|ADZ78759.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sphingobacterium sp. 21]
Length = 670
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/295 (58%), Positives = 218/295 (73%), Gaps = 1/295 (0%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYCES+ R TR V +G+V +G HPIR+Q+MTT DT D G+VE+ +R+ + G +
Sbjct: 12 KYCESLTHYKRWLTREVQIGDVPMGGTHPIRIQSMTTVDTMDTKGSVEQTLRMVEAGCEY 71
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRIT +EA EIK L+++ +PLVADIHF P+ A A +K+RVNPGN+AD
Sbjct: 72 VRITAPSIKEAQNLAEIKKELLKRGCKVPLVADIHFTPNAAEVAARIVEKVRVNPGNYAD 131
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F+QL YTD YQ EL+ I F+PLV+ CK+YG A+RIGTNHGSLSDRIMS+YGD+
Sbjct: 132 KK-KFDQLTYTDAAYQAELERIYTKFAPLVKICKEYGTAMRIGTNHGSLSDRIMSHYGDT 190
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RIC L ++N + SMK+SNP VMVQAYRLLV +M G +YPLHLGVT
Sbjct: 191 PEGMVESALEFIRICEDLHYYNLVISMKSSNPQVMVQAYRLLVEKMMAEGMNYPLHLGVT 250
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE 369
EAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E R L N ++ AE
Sbjct: 251 EAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEEPELEAPVARALVNRYVKRAE 305
>gi|284036285|ref|YP_003386215.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Spirosoma
linguale DSM 74]
gi|283815578|gb|ADB37416.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Spirosoma
linguale DSM 74]
Length = 678
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 233/579 (40%), Positives = 323/579 (55%), Gaps = 44/579 (7%)
Query: 66 GSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVM 125
GSP+L Y S+ + VRRKT TV +G+V +GS++PIRVQ+MTT DT D G+VE+ +
Sbjct: 21 GSPVL-----YTPSLTQYVRRKTSTVTIGDVPMGSDYPIRVQSMTTVDTMDTKGSVEQTI 75
Query: 126 RIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKI 185
R+ + G + VRIT +EA I+ L + Y PLVADIHF P+ A A +K+
Sbjct: 76 RMIEAGCEYVRITAPSVKEAQNLENIRKELRARGYTTPLVADIHFTPNAAELAARIVEKV 135
Query: 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245
R+NPGN+ADR+ +FE ++YTD Y EL+ I + F PLV CK+YG A+RIGTNHGSLSD
Sbjct: 136 RINPGNYADRK-RFEFIDYTDAAYAAELERIRDKFLPLVRICKEYGTAMRIGTNHGSLSD 194
Query: 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW 305
RI+S YGD+P GMVESA EF RIC +++N SMK+SNP VMVQAYRLLV + G
Sbjct: 195 RILSRYGDTPVGMVESALEFLRICEAENYYNITLSMKSSNPQVMVQAYRLLVQRLDEEGL 254
Query: 306 D-YPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLG 364
YPLHLGVTEAGE EDGR+KSA+GIGTLL+DG+GDT+RVSLTE PE+E + L +
Sbjct: 255 KPYPLHLGVTEAGEAEDGRIKSALGIGTLLEDGIGDTVRVSLTEEPEREAPVAKALIDRY 314
Query: 365 MRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQL 424
A Q + + F + RR + E V + G + V D
Sbjct: 315 TNRAATSQPIPAITTYPINPFQYSRR-----LTHE--------VANIGGQNVPRVIADYS 361
Query: 425 KAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARL----ALKRLVDISMGV 480
+ P +K+L +P D ++ L + + A+ LK ++D +
Sbjct: 362 RVPVTEHKNLHPIGHFYLPEPDKWRMND-LGADYIYTGSYPAQFMLPNGLKEILDYT--- 417
Query: 481 ITPLSEQLTKPLPHAMVLVNLQELSTGAYK--LLPEGTRLVVSLRGDESYEELEILKDID 538
+ T P +L ++ L+ A + L P + VSL S +EL D
Sbjct: 418 VWQTGTDQTNVFP---LLTTVEYLAARAAQSELHPRLNFVRVSLPA--SSDELFTTLKAD 472
Query: 539 ATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNV 598
T++L + D + RRL L + PVI + +P + +++ + A T+V
Sbjct: 473 TTVVLL---ISTDNAHAMPELRRLVVELINRGITAPVIINRGYP-AVSEEEVPLYASTDV 528
Query: 599 GALLVDGLGDGLLLEAP-----GQDFDFLRDTSFNLLQG 632
G LL+DGLGDG++L AP D L + SF +LQ
Sbjct: 529 GGLLIDGLGDGIMLSAPQANPSDADLKRLNNLSFGILQA 567
>gi|313674150|ref|YP_004052146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marivirga
tractuosa DSM 4126]
gi|312940848|gb|ADR20038.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marivirga
tractuosa DSM 4126]
Length = 651
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 224/566 (39%), Positives = 328/566 (57%), Gaps = 38/566 (6%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q+YC S+ RRKT V VG+V IG ++PI +Q+MTT DT D G++E+ +R+ D G
Sbjct: 9 QQYCNSLVAYKRRKTIPVKVGDVTIGGDNPIVLQSMTTVDTMDTEGSIEQSIRMIDAGCQ 68
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
LVRIT +EA+ IK L ++ YN PLVADIHF P+ A A+ +K+RVNPGN+A
Sbjct: 69 LVRITAPSIKEAENLRAIKEGLKKRGYNSPLVADIHFTPNAAELAAKIVEKVRVNPGNYA 128
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FE +EYTD+ YQ EL I++ F PLV+ CK++G A+RIGTNHGSLSDRIMS YGD
Sbjct: 129 DKK-KFENIEYTDESYQAELDRIKKRFKPLVKICKEHGTAMRIGTNHGSLSDRIMSRYGD 187
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLG 312
+P GMVESA EF RIC +++F++ + SMK+SNP VMVQAYRLLV ++ G YPLHLG
Sbjct: 188 TPFGMVESALEFIRICEEMEFYDIVVSMKSSNPQVMVQAYRLLVQKLDEEGLKPYPLHLG 247
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAGE EDGR+KS++GIGTLL+DGLGDTIRVSLTE PE+EI + LA+ E
Sbjct: 248 VTEAGEAEDGRIKSSVGIGTLLEDGLGDTIRVSLTEEPEEEIPVAKVLADR-YNEREDHD 306
Query: 373 GVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK 432
+ + + +++++R + G+EV V+ SL Q P +
Sbjct: 307 EIPLIDNCLFNPYEYEKRDSRQVANIGGQEVPI---------VMADFSLKQNITPASFF- 356
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDI----SMGVITPLSEQL 488
G+ + +D + + D + VD ++G++ L
Sbjct: 357 --------GVGYNYSVPLDKWSISDFAC----DYIFTNDKAVDFEIPGTLGIVHSHKTWL 404
Query: 489 -TKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLP 547
K +N ++ G ++ P+ + ++ D S E + LK+ D T +L
Sbjct: 405 DEKHKERRFPFINPKDYLKGV-EVHPK-LNFIYAILSDLSEELIVKLKN-DPTAVLLIDT 461
Query: 548 FNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLG 607
+N + RRLF L + + + PV+ + + + + L + + T++G LL+DG G
Sbjct: 462 YNTHGMAE---QRRLFMELMQKSCDVPVVIGRAYQD-LSLEKLQLYSATDMGGLLIDGFG 517
Query: 608 DGLLLEAPGQDFD-FLRDTSFNLLQG 632
DG+ + A D + +T+FN+LQ
Sbjct: 518 DGVFIAAENCGGDKAINETAFNILQA 543
>gi|395218576|ref|ZP_10402218.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pontibacter
sp. BAB1700]
gi|394454267|gb|EJF08957.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pontibacter
sp. BAB1700]
Length = 657
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 235/569 (41%), Positives = 323/569 (56%), Gaps = 38/569 (6%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S+ + RR+T V +G+V +G+ HPIRVQ+MTT DT D G+VE+ +R+ + G + +
Sbjct: 5 YCPSLTEYKRRETIEVHIGDVPMGAHHPIRVQSMTTVDTMDTLGSVEQCIRMIEAGCEYI 64
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA+ IK+ L ++ YN PLVADIHF P+ A A +K+R+NPGN+AD+
Sbjct: 65 RITAPSIKEAENLRNIKDELRRRGYNTPLVADIHFTPNAAEVAARIVEKVRINPGNYADK 124
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE +EY D+ YQ EL I + F PLV CK++G A+RIGTNHGSLSDRI+S YGD+P
Sbjct: 125 K-KFEVIEYNDETYQAELDRIRDRFVPLVRICKEHGTAMRIGTNHGSLSDRILSRYGDTP 183
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVT 314
GMVESA EF RIC ++N + SMKASN VMVQAYRLLV ++ G YPLHLGVT
Sbjct: 184 LGMVESALEFLRICEDEQYYNIVISMKASNTQVMVQAYRLLVQKLEEEGLKPYPLHLGVT 243
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGE EDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L + AE Q +
Sbjct: 244 EAGEAEDGRIKSAVGIGTLLEDGLGDTVRVSLTEAPEAEAPVAKALIDRYTHRAEKAQPI 303
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
P F + RR + ++ G + R V D S L + LK+ LY L
Sbjct: 304 KPLCNIPIDPFQYHRRE-TVEVENVGGQNVPRVVA--DLSRLREIQYADLKSVGHLYSML 360
Query: 435 AAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPH 494
K DL D I DH L + +I + QL + H
Sbjct: 361 LDKF----NMNDLGA-DYIY------TGDHPINFMLPNGLK---EIINYVPWQLAEEQEH 406
Query: 495 AMVLVNLQE-LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKI 553
L+ +Q+ L G ++ P+ V + + + E L+ LK D+T++L NE +
Sbjct: 407 RHPLLTVQQYLEAG--QMHPK-LNFVEATISELTTELLDRLK-TDSTVVLMLHTTNEHAM 462
Query: 554 GRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
+ R+ F L N +N P I + + D + + A T+VG LL+DGLGDG++L
Sbjct: 463 PEL---RKCFFRLMNNGINTPAIVRRSY-GELTPDQVQLYASTDVGGLLIDGLGDGIMLG 518
Query: 614 A---PGQD-------FDFLRDTSFNLLQG 632
P Q+ + L + SF +LQ
Sbjct: 519 TELLPEQEKVELLQTIEKLNNLSFGILQA 547
>gi|375149875|ref|YP_005012316.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Niastella
koreensis GR20-10]
gi|361063921|gb|AEW02913.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Niastella
koreensis GR20-10]
Length = 665
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 238/582 (40%), Positives = 325/582 (55%), Gaps = 46/582 (7%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q YC+S+ + R TR V +G++ +G+ +PIRVQTMTT DT D TVE+ +R + GA+
Sbjct: 2 QLYCDSLTEYKRLATREVRIGDLLLGNFNPIRVQTMTTTDTMDTIATVEQSIRCIEAGAE 61
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
+VRIT K+EA+ IKN L ++ Y PL+ADIHF P+ A A +K+RVNPGN+
Sbjct: 62 MVRITAPSKKEAENLLNIKNELHKRGYKTPLIADIHFTPNAAEIAARIIEKVRVNPGNYV 121
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FEQ++YTD EY +E+ I E F+PLV+ CK+YG A+RIGTNHGSLSDRIMS YGD
Sbjct: 122 DKK-KFEQIDYTDAEYAEEIDRIRERFTPLVKICKEYGTAMRIGTNHGSLSDRIMSRYGD 180
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLG 312
+P GMVESA EF RI R +HN + SMKASNP VMVQAYRLLV M G YPLHLG
Sbjct: 181 TPMGMVESAMEFLRIARNESYHNIILSMKASNPQVMVQAYRLLVNVMMDEFGEAYPLHLG 240
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCR----RLANLGMRAA 368
VTEAG+GEDGR+KSAIGIGTLL+DGLGDTIRVSLTE PE EI CR R N +
Sbjct: 241 VTEAGDGEDGRIKSAIGIGTLLEDGLGDTIRVSLTEDPEFEIPVCRDLVNRYTNRQLVTG 300
Query: 369 ELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPE 428
Q G+ + F++ RRS G+ V V+ D S+ + L+A
Sbjct: 301 NKQTGIPAITKVPYSPFEYTRRSTDTVSNIGGKHVP---VVVADFMKAASIRHEDLQAIG 357
Query: 429 LLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQL 488
Y + K ++ D ++LP D LK + D + + P E+
Sbjct: 358 YTYNTETDKFIIADAAADYLYTG----KKLP---DFALPGTLKVICDHATWLNAPDKEKY 410
Query: 489 TKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPF 548
PL + + + S G + V + E L+ ++ D T++L
Sbjct: 411 -YPLFQSTEYLKSTDHS-GKLNF------VAVDVNQTNCQELLQKIRK-DYTVVLCLYSS 461
Query: 549 NEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGD 608
N + V RR L + P+I ++ N D+ +I T+ GALL+DG+GD
Sbjct: 462 NAHTMPSV---RRYIIELMNQGITCPIILSVE-SNDTTIDEQLIHFSTDSGALLLDGMGD 517
Query: 609 GLLL----------EAPGQDF-------DFLRDTSFNLLQGV 633
G+ L + G+ + F+ +TSF++LQ
Sbjct: 518 GIWLMNEPEKIRNQKVSGRTYLETKSNHQFINNTSFSILQAT 559
>gi|110638588|ref|YP_678797.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cytophaga
hutchinsonii ATCC 33406]
gi|110281269|gb|ABG59455.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cytophaga
hutchinsonii ATCC 33406]
Length = 665
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 175/320 (54%), Positives = 237/320 (74%), Gaps = 7/320 (2%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYC S+ + VRRK+ V +G V +G ++PIR+Q+MTT DT D G+VE+++R+ + G +
Sbjct: 12 KYCSSLTQYVRRKSSVVTIGKVPMGGDYPIRLQSMTTVDTMDTMGSVEQIIRMVEAGCEY 71
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+T +EA IKN L+++ Y++PLVADIHF P+ A A+ +K+R+NPGN+AD
Sbjct: 72 VRVTAPSVKEAQNLENIKNELLKRGYDVPLVADIHFTPNAAELAAKIVEKVRINPGNYAD 131
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +FE +EYTD YQ+EL+ I E F PLV+ CK+YG A+RIGTNHGSLSDRI+S YGD+
Sbjct: 132 KK-KFEVIEYTDASYQEELERIREKFIPLVKICKEYGTAMRIGTNHGSLSDRILSRYGDT 190
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW-DYPLHLGV 313
P GMVESA EF RIC L+++N + SMKASN VMVQAYRLLV ++ G YPLHLGV
Sbjct: 191 PLGMVESALEFLRICEDLEYYNIVISMKASNTQVMVQAYRLLVQKLEEEGLRPYPLHLGV 250
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
TEAGE EDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE EI ++L + R + ++
Sbjct: 251 TEAGEAEDGRIKSAVGIGTLLEDGLGDTVRVSLTEAPEFEIPVAQKLVD---RYIDRKKH 307
Query: 374 VA-PFEEKHR-HYFDFQRRS 391
A PF EK+ + + ++RR+
Sbjct: 308 AAIPFVEKNPINPYSYKRRT 327
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 531 LEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDL 590
L + D A +IL FNE + + RR F L + PVI + + + + L
Sbjct: 449 LRLASDTTAVLILES--FNEHAMAEL---RRSFITLMNREIATPVIIKRAYTHK-NEETL 502
Query: 591 VIGAGTNVGALLVDGLGDGLLLEA 614
+ A T+ G LLVDGLGDG+ L +
Sbjct: 503 FLAASTDAGGLLVDGLGDGIFLSS 526
>gi|385808906|ref|YP_005845302.1| (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
[Ignavibacterium album JCM 16511]
gi|383800954|gb|AFH48034.1| (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
[Ignavibacterium album JCM 16511]
Length = 666
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/317 (55%), Positives = 220/317 (69%), Gaps = 2/317 (0%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
+KYC S+ K R KTR V +G++ +G +PIR+Q+MTT DT + TV + +R+ + G +
Sbjct: 9 KKYCNSLTKYSRYKTREVYIGDIPLGGNNPIRIQSMTTTDTMNTEATVAQTIRMVEAGCE 68
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
VRIT EA IKN L ++ Y +PL+ADIHF P+ A A +K+R+NPGN+
Sbjct: 69 YVRITAPSINEARNLENIKNELRKRGYKVPLIADIHFTPNAAELAARIVEKVRINPGNYV 128
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FE +EYTD EY+ EL+ I E F PLV CK+YG A+RIGTNHGSLSDRIMS YGD
Sbjct: 129 DKK-KFELIEYTDAEYEAELERIREKFVPLVRICKEYGTAMRIGTNHGSLSDRIMSRYGD 187
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P GMVESA EF RIC +HN + SMKASNP VMVQAYRLLV +M G +YPLHLGV
Sbjct: 188 TPLGMVESALEFLRICEDEGYHNIVLSMKASNPQVMVQAYRLLVNKMEAEGMNYPLHLGV 247
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
TEAG GEDGR+KSA+GIGTLL+DGLGDTIRVSLTE PE E LAN E +
Sbjct: 248 TEAGGGEDGRIKSALGIGTLLEDGLGDTIRVSLTEDPEFEAPVAISLANR-YEGRENHEP 306
Query: 374 VAPFEEKHRHYFDFQRR 390
+ P +E F++ RR
Sbjct: 307 IKPIDESPIDPFNYNRR 323
>gi|410027746|ref|ZP_11277582.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinilabilia
sp. AK2]
Length = 659
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 227/580 (39%), Positives = 330/580 (56%), Gaps = 50/580 (8%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L+ + +YC S+ RRKT V VG+V IG ++PI VQ+MTT DT D G+VE+ +R+ D
Sbjct: 6 LLDKIRYCNSLTSYSRRKTIPVKVGDVIIGGDNPIVVQSMTTVDTMDTQGSVEQCIRMID 65
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
G L+RIT +EA+ IK L ++ YN PLVADIHF P+ A A+ +K+R+NP
Sbjct: 66 AGCQLIRITAPSIKEAENLRNIKEGLKKRGYNTPLVADIHFTPNAAEIAAKIVEKVRINP 125
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GN+AD++ +FE +EYTD YQ+EL I E F PLV+ CK++G A+RIGTNHGSLSDRIMS
Sbjct: 126 GNYADKK-KFEIIEYTDQSYQEELYRIRERFLPLVKICKEHGTAIRIGTNHGSLSDRIMS 184
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YP 308
YGD+P GMVESA EF RIC +F++ + SMK+SN VMVQAYRLLV ++ G+ YP
Sbjct: 185 RYGDTPLGMVESALEFLRICEDENFYDVVISMKSSNTQVMVQAYRLLVHKLEEGGFKPYP 244
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAA 368
LHLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L +
Sbjct: 245 LHLGVTEAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAKALVD----RY 300
Query: 369 ELQQGVAPFEEKHRHY----FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQL 424
+ + AP + + HY F++ +R D V + G+ + V D
Sbjct: 301 DKRSNHAPIVDIN-HYPISPFEYNKR-------------DTLEVFNFGGTNVPRVIADIS 346
Query: 425 KAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPL 484
P++ K + +P D ++ + S + + + +I + +
Sbjct: 347 AIPQVSEKEMKQVGHFYLPELDKWKMNDQGADYVFSGSNPIPFMLPNGMKEIQLYPVWFT 406
Query: 485 SEQLTKPLPHAMV--LVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMI 542
+E P + + ++L G L+ E ++ +L E +++ ++ D
Sbjct: 407 AEDQVNKFPAFQLEEFIAAEKLHYGLNFLMLEDYQIAKALPVLEGRKDVVVILQSDN--- 463
Query: 543 LHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALL 602
LH++P A RR F L EN+ PV+ + +P +D ++ A T+VG LL
Sbjct: 464 LHNMP----------ALRRAFFELLENHNQLPVVVKVNYPKQ-PQDQTMLYAATDVGGLL 512
Query: 603 VDGLGDGLLL-------EAPGQDFDFLR---DTSFNLLQG 632
+DGLG+G++L A G+ D ++ SF +LQ
Sbjct: 513 IDGLGEGIMLGLDAYHETARGEVLDQIKLHNSVSFGVLQA 552
>gi|221053991|ref|XP_002261743.1| GcpE protein [Plasmodium knowlesi strain H]
gi|193808203|emb|CAQ38906.1| GcpE protein, putative [Plasmodium knowlesi strain H]
Length = 813
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 223/592 (37%), Positives = 328/592 (55%), Gaps = 66/592 (11%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
+KYCE K R TR V +GN+ IG + I +QTMTT DTK+V V ++ + + GAD
Sbjct: 96 KKYCECTKKYRRLPTREVTIGNIKIGGNNKIAIQTMTTCDTKNVDECVNQIKKCKELGAD 155
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
L+R+TVQG +EA+A + IK L+ +N IPLVADIHF P +++ A+ FDKIRVNPGN+
Sbjct: 156 LIRLTVQGVQEAEASYYIKEKLLAQNITIPLVADIHFNPKISMIAADVFDKIRVNPGNYV 215
Query: 194 DRRAQF-EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
D R ++ +++ T +E+ + I+E F PL+EKCK+ RA+RIGTNHGSLS R++SYYG
Sbjct: 216 DGRKKWVDKVYKTREEFDEGKLFIQEKFVPLIEKCKRLNRAIRIGTNHGSLSSRVLSYYG 275
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMY---VHGWDYPL 309
D+P GMVESAFEF+ +C + +F N +FSMKASN +M+Q+YRLLVA Y G +PL
Sbjct: 276 DTPLGMVESAFEFSDLCIQNNFFNVVFSMKASNAYIMIQSYRLLVARQYKRMTDGLLFPL 335
Query: 310 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL-ANLGM--- 365
HLGVTEAG G++GR+KS +GIG+LL DG+GDTIR+SLTE P E+ PC+ L N
Sbjct: 336 HLGVTEAGFGDNGRIKSYLGIGSLLYDGIGDTIRMSLTEDPWNELAPCKTLIKNFKKRVF 395
Query: 366 -----RAAELQQGVAP-----------FEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVL 409
R E V+P FEE R Y ++R ++K GV+
Sbjct: 396 YDDDNRGGEKDGRVSPSPGDTSSTLLNFEEHFRDYNKLKKRK----VEKR------EGVM 445
Query: 410 HRDGSVLMSVSLDQLKAPELLYKSL------AAKLVVGMPFKDLATVDSILLRELPSVDD 463
H + ++ V+ +L+ ++K L L G+ D+ + LREL S
Sbjct: 446 HEEYTIGNVVTEKELEDSLQIFKDLNLEVDQNGNLKKGVKSTDIVIIPQ--LRELSSKSW 503
Query: 464 HD-ARLA---LKRLVDISMGVITPLS---------EQLTKPLPHAMVLVNLQELST---- 506
A+LA + L + G + LS ++ + + + ++L+ + T
Sbjct: 504 TTVAKLAEADMHLLAEYDEGDVAMLSGSTSGSEYTHEMDRVARNTLFYIDLKRMKTILQK 563
Query: 507 --GAYKLLPEGTRLVVSLRGDESYEELE-ILKDIDATMILHDLPF--NEDKIG-RVQAAR 560
G L V+ + G E + +E + I L F D I V R
Sbjct: 564 HEGQIPLHSTAKGYVLMVNGKEDTKLIEDVFNQIKGEKNPRPLFFLLKSDNIHEHVLVTR 623
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL 612
R E ++ N++ P +H+ N + DD+++ + VG L+D +GDGL++
Sbjct: 624 RFNEIVNSLNIDLPYVHYANI-NSTNYDDMLVDSTLYVGTCLIDLMGDGLII 674
>gi|327403526|ref|YP_004344364.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fluviicola
taffensis DSM 16823]
gi|327319034|gb|AEA43526.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fluviicola
taffensis DSM 16823]
Length = 644
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 220/572 (38%), Positives = 314/572 (54%), Gaps = 62/572 (10%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
+C + R +TR V VG IG ++PIR+Q+MTT D+ D AG++++ +R+ D G +LV
Sbjct: 15 FCTDLFHRERFETREVKVGITTIGGKNPIRIQSMTTTDSMDTAGSIDQSIRMIDAGCELV 74
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
R+T K+EA+ IK LV++ YN PLVADIHF P+ A A+ +K+RVNPGN+AD+
Sbjct: 75 RLTAPSKKEAENLRVIKKELVKRGYNTPLVADIHFTPNAAEIAAKHIEKVRVNPGNYADK 134
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE+++YT++ YQ EL IE+ F+PLV CK++ A+RIGTNHGSLSDRI+S +GD+P
Sbjct: 135 K-KFEEIDYTEESYQAELIRIEKKFTPLVLLCKEHQTAMRIGTNHGSLSDRILSRFGDTP 193
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMV+SA EF ICRK D+H + SMKASN +VMVQAYRLLV M G +YPLHLGVTE
Sbjct: 194 EGMVQSAMEFIHICRKNDYHELVISMKASNTLVMVQAYRLLVKTMKEQGMNYPLHLGVTE 253
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVA 375
AG+GEDGR+KSA+GIG LL+DGLGDTIRVSLTE PE EI ++LA
Sbjct: 254 AGDGEDGRIKSAVGIGALLEDGLGDTIRVSLTEDPEFEIPVAQKLAQ------------- 300
Query: 376 PFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLA 435
F+EK+ + ++ + DY R + L+++ +++ L+
Sbjct: 301 KFQEKNEYKLNYSSKIN----------FDYFNHNKRITNSLLNIGGSN---TSIVFSDLS 347
Query: 436 AK-LVVGMPFKDLATVDSILLRELPSVDDHDARLAL--KRLVDI----SMGVITPLSEQL 488
K +V F S L + ++ D A L + +D ++ ++
Sbjct: 348 KKNKIVSTNFFGFGYSYSEPLDKW-NIFDQAADLVYLGDQTIDFEIPGTLRIVQNYEAWK 406
Query: 489 TKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPF 548
T A L LQE + K PEG +L D+DA + +LP
Sbjct: 407 THKRSDAYPLCTLQEYT----KNKPEGVVF--------------LLVDLDAETAVSELPS 448
Query: 549 NE-------DKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGAL 601
+ K + Q R+ L+E N PVI + + + A ++ G
Sbjct: 449 EQIIYVAETKKHQKTQVIRKFQYELAELNNRVPVILKLNYELEELEMLQLY-ASSDAGIH 507
Query: 602 LVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGV 633
+DG DG+ + AP D L SF +LQ
Sbjct: 508 FIDGFSDGIWITAPRPLVD-LNSLSFGILQAT 538
>gi|124008572|ref|ZP_01693264.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microscilla
marina ATCC 23134]
gi|123985946|gb|EAY25803.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microscilla
marina ATCC 23134]
Length = 664
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 227/576 (39%), Positives = 325/576 (56%), Gaps = 47/576 (8%)
Query: 73 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGA 132
R+ Y +S+ + RR++ V +GNV +G + PIRVQ+MTT DT D G++ + +R+ D G
Sbjct: 11 RKLYTQSLTEFKRRQSIEVNIGNVPLGGKQPIRVQSMTTVDTMDTEGSIAQAIRMIDAGC 70
Query: 133 DLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNF 192
+ VRIT +EA IK L K Y PLVADIHF P+ A A +K+RVNPGN+
Sbjct: 71 EYVRITAPSIKEAQNLQNIKEGLRAKGYQTPLVADIHFTPNAAELAAGIVEKVRVNPGNY 130
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
AD++ +FE +EYTD++YQ+ELQ I E F PLV+ CK A+RIGTNHGSLSDRIMS YG
Sbjct: 131 ADKK-KFEIIEYTDEQYQEELQRIRERFEPLVKLCKANKTAMRIGTNHGSLSDRIMSRYG 189
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHL 311
D+P GMVESA EF RIC L +++ + SMKASNP VMVQAYRLLV ++ G YPLHL
Sbjct: 190 DTPLGMVESALEFLRICEDLAYYDIVISMKASNPQVMVQAYRLLVQKLDEEGLKPYPLHL 249
Query: 312 GVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQ 371
GVTEAGEGEDGR+KSA+GIG LL+DGLGDT+RVSLTE PE E+ ++L + + A
Sbjct: 250 GVTEAGEGEDGRIKSAMGIGALLEDGLGDTVRVSLTEEPEAEMPVGKKLVDRYLDRAN-H 308
Query: 372 QGVAPFEEKHRHY----FDFQRRSGQLPIQKEGEEVDYRGV--LHRDGSVLMSVSLDQLK 425
+ PF+ ++ + +Q+R+ KE + V + D S + + +D LK
Sbjct: 309 SSITPFDWQNASIEYSPYAYQKRT-----TKEVSNFGHDNVPRVIADYSTVNHLQVDDLK 363
Query: 426 APELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLS 485
+ VG + L +D + +L + + + + ++ + VI S
Sbjct: 364 S-------------VGHYY--LPELDKWGMNDLGADYIYLGKQLIPFMMPNGLKVIQDYS 408
Query: 486 EQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHD 545
K + + + E T A L + R + D S + ++ +K+ D ++
Sbjct: 409 -TWQKEKEQSYPALTIDEYMTAAD--LGDTLRFLYVQWSDFSEDLIKSIKN-DHHLV--- 461
Query: 546 LPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLV-IGAGTNVGALLVD 604
L + D + RR+F L E L PV+ + +LV + A T+VG LL+D
Sbjct: 462 LILSTDNSHAMAELRRVFFELMEQGLELPVVVKRDYAK--ENIELVQLYASTDVGGLLID 519
Query: 605 GLGDGLLL--------EAPGQDFDFLRDTSFNLLQG 632
G GDG++L E + + L + SF +LQ
Sbjct: 520 GWGDGIMLSNGQPENKEELLEQINQLNNLSFGILQA 555
>gi|374375169|ref|ZP_09632827.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Niabella soli
DSM 19437]
gi|373232009|gb|EHP51804.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Niabella soli
DSM 19437]
Length = 682
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 243/618 (39%), Positives = 329/618 (53%), Gaps = 99/618 (16%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L + Y S+ R T+ V +G++ +G+ HPIRVQTMTT DT D TVE+ +R +
Sbjct: 6 LCSMELYAASLTSYKRLLTKEVRIGDLLLGNNHPIRVQTMTTTDTMDTLATVEQSIRCIE 65
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
GA+LVRIT K+EA+ IKN L ++ YN PLVADIHF P+ A A +K+RVNP
Sbjct: 66 AGAELVRITAPSKKEAENLLNIKNELHKRGYNTPLVADIHFTPNAAEIAARIVEKVRVNP 125
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GN+ D++ +FEQ+EYTD EY +E+ I E F+PLV+ C++YG A+RIGTNHGSLSDRIMS
Sbjct: 126 GNYVDKK-KFEQIEYTDAEYAEEIDRIRERFTPLVKICREYGTAMRIGTNHGSLSDRIMS 184
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM-YVHGWDYP 308
YGD+P GMVESA EF RI R D+H + SMKASNP VMVQAYRLL+ M G YP
Sbjct: 185 RYGDTPMGMVESAMEFLRIARSEDYHQIILSMKASNPQVMVQAYRLLIKTMDEEFGEIYP 244
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC----RRLANLG 364
LHLGVTEAG+GEDGR+KSAIGIGTL++DG+GDTIRVSLTE PE EI C +R
Sbjct: 245 LHLGVTEAGDGEDGRIKSAIGIGTLMEDGIGDTIRVSLTEDPELEIPVCRDIVKRYEVNK 304
Query: 365 MRAAELQQGVAPFEEKHRHY---------FDFQRR---------SGQLPIQKEGEEVDYR 406
++ ++ + V+ F ++ F ++RR GQ+P
Sbjct: 305 FKSLKVNREVSDFLSTYQPLNLSTLKYSPFQYKRRISAPVSNIGGGQVP----------- 353
Query: 407 GVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDA 466
V+ + S +V L++ Y + K + A D I L DD
Sbjct: 354 -VVVANFSNRQTVMPQDLESIGYTYDQVTDKWHIAD-----AAADYIYL------DDPAI 401
Query: 467 RLALKRLVDISMGVITPLSEQL-----TKPLPHAMVLVNLQELSTGAYKLLPEGTRLV-- 519
AL ++ +ITP S+ L TK P + AY EG +
Sbjct: 402 GFALPG----TLKIITPHSQWLLVEDKTKCFPF---------YTAEAYT---EGDSHINF 445
Query: 520 VSLR----GDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPV 575
VS+ G+ S L+ L T++ + D +Q+ RR L E N P+
Sbjct: 446 VSVNCTDGGELSDAALDNLVQAKNTVLF----LSSDNKNAMQSVRRFCMLLQEKNCTHPI 501
Query: 576 IHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL-------------EAPGQDF--- 619
I N D+ +I T GAL +DG GDG+ L + G+++
Sbjct: 502 ILETN-SNWETADEHLIHLATETGALFLDGFGDGICLGMGQKADAAVSIVNSSGRNYLNN 560
Query: 620 ----DFLRDTSFNLLQGV 633
FL +T+F++LQ
Sbjct: 561 NSVHQFLNNTAFSILQAT 578
>gi|431797477|ref|YP_007224381.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Echinicola
vietnamensis DSM 17526]
gi|430788242|gb|AGA78371.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Echinicola
vietnamensis DSM 17526]
Length = 661
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/322 (52%), Positives = 233/322 (72%), Gaps = 5/322 (1%)
Query: 71 VPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQ 130
+ + KYC+S+ + RRKT V +G+V IG ++PI VQ+MTT DT D G++EE +R+
Sbjct: 7 IAKTKYCDSLTRYSRRKTIPVQIGDVVIGGDNPIVVQSMTTKDTMDTEGSIEECIRMIKS 66
Query: 131 GADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPG 190
G +L+RIT +EA+ IK L ++ Y++PLVADIHF P+ A A +K+R+NPG
Sbjct: 67 GCELIRITAPSIKEAENLRHIKAGLAERGYHVPLVADIHFTPNAAEIAARIVEKVRINPG 126
Query: 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSY 250
N+AD++ +FE++EYTD+ YQ EL+ I E F PLV+ CK++G A+RIGTNHGSLSDRIMS
Sbjct: 127 NYADKK-KFEEIEYTDESYQAELERIRERFLPLVKICKEHGTAMRIGTNHGSLSDRIMSR 185
Query: 251 YGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPL 309
YGD+P GMVESA EF RIC + +H+ + SMK+SN VMVQAYRLLV ++ G+ YPL
Sbjct: 186 YGDTPLGMVESALEFLRICEEEHYHDIVISMKSSNTQVMVQAYRLLVQKLDEGGFQPYPL 245
Query: 310 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAA 368
HLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L + +R
Sbjct: 246 HLGVTEAGDGEDGRVKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAKALIDRYALRPG 305
Query: 369 ELQQGVAPFEEKHRHYFDFQRR 390
+ ++P + + +++++R
Sbjct: 306 --HEAISPISDYPLNPYEYEKR 325
>gi|255034274|ref|YP_003084895.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dyadobacter fermentans DSM 18053]
gi|254947030|gb|ACT91730.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dyadobacter fermentans DSM 18053]
Length = 664
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 216/550 (39%), Positives = 303/550 (55%), Gaps = 51/550 (9%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S+ RR+T T+ +G++ +GS++PIRVQ+MTT DT D G+++EV+R+ + G + V
Sbjct: 12 YCPSLTAYERRRTITIHIGDLPMGSDYPIRVQSMTTVDTMDTQGSIDEVIRMVESGCEYV 71
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA I+N L + +PL+ADIHF P+ A A +K+R+NPGN+ADR
Sbjct: 72 RITAPSVKEAQNLENIRNGLRKLGIQVPLIADIHFTPNAAELAARIVEKVRINPGNYADR 131
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE ++YTD Y EL+ I E F PLV+ CK+YG A+RIGTNHGSLSDRI+S YGD+P
Sbjct: 132 K-RFEVIDYTDASYAAELERIREKFIPLVKICKEYGTAMRIGTNHGSLSDRILSRYGDTP 190
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVT 314
GMVESA EF RIC + +++N SMK+SN VMV+AYRLLV + G YPLHLGVT
Sbjct: 191 LGMVESALEFLRICEEFNYYNIALSMKSSNTQVMVEAYRLLVQRLDEEGLKPYPLHLGVT 250
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQG 373
EAGE EDGR+KSA+GIGTLL+DGLGDT+RVSLTE PEKE R L RA+
Sbjct: 251 EAGEAEDGRIKSAVGIGTLLEDGLGDTVRVSLTEAPEKEAPVARALIERYATRAS--HAP 308
Query: 374 VAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELL--Y 431
+ P + + F + RR D R V +L L P ++ Y
Sbjct: 309 IEPVDHCPINPFQYTRR-------------DTREVY----------NLGHLNVPRVIADY 345
Query: 432 KSLAAKLVVGMPFKDLATVDSILLRELP---SVDDHDARLALKRLVDISMGVITPLSEQL 488
++ + DL ++ L +P +++D A + + L E L
Sbjct: 346 SNIEVQ-----QLDDLKSIGHFFL-PVPDKWAMNDQGADFIYSGQKPVPFMLPNGLREIL 399
Query: 489 TKP--LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGD-ESYEEL---EILKDIDATMI 542
P L H + + + E + + + GD ++ E E+ + ++
Sbjct: 400 DYPQWLVHPEKHIKFPLFNVADWNAATEVSSELNFIEGDIHTFNEAFLNEVAGKTNIVLV 459
Query: 543 LHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALL 602
LH D + RR F L+E PVI + + D L + + T++G LL
Sbjct: 460 LHT-----DNAHAMPEMRRFFYKLTEMKNRLPVIIRRSYQTDLG-DRLTLYSATDIGGLL 513
Query: 603 VDGLGDGLLL 612
VDG GDG LL
Sbjct: 514 VDGFGDGTLL 523
>gi|406662477|ref|ZP_11070573.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cecembia
lonarensis LW9]
gi|405553615|gb|EKB48817.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cecembia
lonarensis LW9]
Length = 659
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/294 (57%), Positives = 217/294 (73%), Gaps = 2/294 (0%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L+ + +YC S+ RRKT V VG+V IG + PI VQ+MTT DT D G+VE+ +R+ D
Sbjct: 6 LLEKIRYCNSLTSYSRRKTIPVKVGDVIIGGDSPIVVQSMTTVDTMDTIGSVEQCIRMID 65
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
G L+RIT +EA+ EIK L+ + YN PLVADIHF P+ A A+ +K+R+NP
Sbjct: 66 AGCQLIRITAPSIKEAENLREIKKELLNRGYNTPLVADIHFTPNAAEIAAKIVEKVRINP 125
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GN+AD++ +FE +EYTD YQ+EL+ I E F PLV+ CK++G A+RIGTNHGSLSDRIMS
Sbjct: 126 GNYADKK-KFEIIEYTDQSYQEELERIRERFLPLVKICKEHGTAMRIGTNHGSLSDRIMS 184
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YP 308
YGD+P GMVESA EF RIC +FH+ + SMK+SN VMVQAYRLLV ++ G+ YP
Sbjct: 185 RYGDTPLGMVESALEFLRICEDENFHDIVISMKSSNTQVMVQAYRLLVQKLEQGGFKPYP 244
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
LHLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L +
Sbjct: 245 LHLGVTEAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAKTLVD 298
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 538 DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
D +ILH + + + A RR F L EN+ PV+ + +P +D ++ A T+
Sbjct: 454 DVVIILHS-----ENLHNMPALRRAFFDLLENHNQLPVVIKVNYPKQ-PQDQTMLYAATD 507
Query: 598 VGALLVDGLGDGLLL 612
VG LLVDGLG+G+++
Sbjct: 508 VGGLLVDGLGEGIMI 522
>gi|156082095|ref|XP_001608540.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (GcpE)
[Plasmodium vivax Sal-1]
gi|148801111|gb|EDL42516.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (GcpE),
putative [Plasmodium vivax]
Length = 820
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 216/583 (37%), Positives = 326/583 (55%), Gaps = 55/583 (9%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
+KYCE + R TR V + N+ IG + I +QTMTT DT++V V ++ + + GAD
Sbjct: 86 KKYCECTKRYRRLPTREVPIDNIKIGGSNKIAIQTMTTCDTRNVDECVYQIKKCKELGAD 145
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
L+R+TVQG +EA+A + IK L+ +N IPLVADIHF P ++L A+ FDKIR+NPGN+
Sbjct: 146 LIRLTVQGVQEAEASYHIKEKLLAQNITIPLVADIHFNPKISLMAADVFDKIRINPGNYV 205
Query: 194 D-RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
D R+ ++ T +E+ + I+E F PL+EKCK+ RA+RIGTNHGSLS R++S+YG
Sbjct: 206 DGRKKWINKIYKTREEFDQGKLFIQEKFIPLIEKCKRLNRAIRIGTNHGSLSSRVLSFYG 265
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV---HGWDYPL 309
D+P GMVESAFEF+ +C + +F N +FSMKASN +M+Q+YRLLVA Y +G +PL
Sbjct: 266 DTPLGMVESAFEFSDLCVQNNFFNVVFSMKASNAYIMIQSYRLLVARQYERMGNGLLFPL 325
Query: 310 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL-ANLGMR-- 366
HLGVTEAG G++GR+KS +GIG+LL DG+GDTIR+SLTE P +E+ PC+ L NL R
Sbjct: 326 HLGVTEAGFGDNGRIKSYLGIGSLLYDGIGDTIRISLTEDPWEELTPCKTLIKNLKKRVF 385
Query: 367 ------AAELQQGVAP-----------FEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVL 409
E V+P FEE R++ +R+ ++K GVL
Sbjct: 386 YDDHNEGGEEDGRVSPPGGSTSSKLLSFEEHFRNFNKMAKRN----VEKR------EGVL 435
Query: 410 HRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLA-TVDSILLRELPSVDDHD--- 465
H + ++ V+ +L+ ++K L +L K A + D +++ +L +
Sbjct: 436 HEECTIGNVVTEKELEDSLQIFKDLNLELDQNGNLKKGAKSTDIVVVPKLGGLSGRSWAT 495
Query: 466 -ARLA---LKRLVDISMGVITPLSEQLTKPLP---HAMVLVNLQELST------GAYKLL 512
RLA + L + G + LS P + + NL + T G L
Sbjct: 496 LGRLAEAGVHLLAEYDEGDVAMLSSTTKGMDPVARNTLFYANLNHMQTLLQKHGGRIPLH 555
Query: 513 PEGTRLVVSLRGDESYEELE-ILKDIDAT--MILHDLPFNEDKIGRVQAARRLFEYLSEN 569
V+ + G E +E + + + L L ++ V A RR E ++
Sbjct: 556 SAAKGYVLLVNGKEDTHLVEQVFNQMKGKNPLPLFFLLKSDSIYEHVIATRRFNEIVNSL 615
Query: 570 NLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL 612
+N P +H+ + + DD+++ + +VG L+D +GDGL++
Sbjct: 616 RINVPYVHYANVTSTSY-DDMLVDSTLHVGTCLIDLMGDGLII 657
>gi|397690323|ref|YP_006527577.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Melioribacter
roseus P3M]
gi|395811815|gb|AFN74564.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Melioribacter
roseus P3M]
Length = 649
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 226/583 (38%), Positives = 327/583 (56%), Gaps = 69/583 (11%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KYC S + R KTR V +G V +G ++PIRVQ+MTT DT D TVE+ +R+ + G +
Sbjct: 7 KYCLSATRYKRYKTREVNIGGVPLGGDNPIRVQSMTTTDTMDTIATVEQSIRMIEAGCEY 66
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRIT EA IKN L ++ Y PL+ADIHF P+ A A +K+R+NPGN+ D
Sbjct: 67 VRITAPSINEARNLENIKNELRKRGYKTPLIADIHFTPNAAEVAARIVEKVRINPGNYVD 126
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F+ +EYTD +Y++E++ I E F PL++ CK+YG A+RIGTNHGSLSDRIMS YGD+
Sbjct: 127 KK-KFQTIEYTDKQYEEEIERIRERFVPLLKICKEYGTAIRIGTNHGSLSDRIMSRYGDT 185
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RICR +FH+ + SMKASNP VMVQAYRLLV +M G++YPLHLGVT
Sbjct: 186 PLGMVESALEFVRICRDENFHDIVLSMKASNPQVMVQAYRLLVNKMEEEGYNYPLHLGVT 245
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKE----IDPCRRLANLGMRAA-- 368
EAG+GEDGR+KSA+GIG LL+DGLGDTIRVSLTE PE E I R AN G +
Sbjct: 246 EAGDGEDGRIKSAVGIGALLEDGLGDTIRVSLTEEPENEIPVAITLAERYANRGGHESIP 305
Query: 369 ELQQGVA-PFEEKHRHYFDFQRRSGQ-----------LPIQKEGEEVDYRGVLHRDGSVL 416
+++ V PF K R F+ G + + KE +++ G + G+
Sbjct: 306 SIKKVVIDPFNYKRRETFEVSDFGGANVPKVIADFALVDLNKES-QLEPIGYTYDGGTDK 364
Query: 417 MSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDI 476
+ S DQ + + +Y L K+ P +L T L + D+D + ++ +
Sbjct: 365 WNYS-DQ--SADYIY--LGKKI----PAFNLPT-------NLKPILDYDEWIKSEKKTEY 408
Query: 477 --SMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEIL 534
G ++ ++K V +++ ++ + +++ R+V L
Sbjct: 409 FPYFGSTKDFAQSISKSFVMNFVEISINDIKNKSLEIIKNDPRIVFVL------------ 456
Query: 535 KDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGA 594
T LH + RR+F +L EN++ PV+ + + L + +
Sbjct: 457 ----TTGNLHGM----------AEQRRVFFHLIENDIKNPVVIRRAYSTD-DSEKLTLYS 501
Query: 595 GTNVGALLVDGLGDGLLLEAPGQD----FDFLRDTSFNLLQGV 633
T++GALL+DGLGDG+ + + + + SF +LQ
Sbjct: 502 STDLGALLIDGLGDGVWITPAAKSDAGATELINRLSFGILQAT 544
>gi|404451944|ref|ZP_11016889.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Indibacter
alkaliphilus LW1]
gi|403762327|gb|EJZ23409.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Indibacter
alkaliphilus LW1]
Length = 659
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/297 (56%), Positives = 221/297 (74%), Gaps = 2/297 (0%)
Query: 67 SPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMR 126
+ L++ + KYC+S+ RRKT V VG V IG ++PI VQ+MTT DT D G++E+ +R
Sbjct: 3 TKLMLDKNKYCDSLTGYSRRKTIPVKVGEVIIGGDNPIVVQSMTTVDTMDTQGSIEQCVR 62
Query: 127 IADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIR 186
+ + G L+RIT +EA+ EIK L++K Y+ PLVADIHF P+ A A+ +K+R
Sbjct: 63 MIESGCQLIRITAPSIKEAENLREIKRGLLEKGYSTPLVADIHFTPNAAEIAAKIVEKVR 122
Query: 187 VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDR 246
+NPGN+AD++ +FE +EY D+ YQ+EL+ I E F PLV+ CK++G A+RIGTNHGSLSDR
Sbjct: 123 INPGNYADKK-KFEVIEYPDESYQEELERIRERFLPLVKICKEHGTAMRIGTNHGSLSDR 181
Query: 247 IMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD 306
IMS YGD+P GMVESA EF RIC ++H+ + SMK+SN VMVQAYRLLV ++ G+
Sbjct: 182 IMSRYGDTPLGMVESALEFLRICENENYHDIVISMKSSNTQVMVQAYRLLVNKLEEGGFK 241
Query: 307 -YPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
YPLHLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L +
Sbjct: 242 PYPLHLGVTEAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAKALVD 298
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL 612
A RR F L E N++ PV+ + +P+ +D ++ A T+ G +LVDGLGDG++L
Sbjct: 469 AIRRAFVRLLEQNIDIPVVIKLNYPDQ-DKDQTMLNAATDAGGMLVDGLGDGIML 522
>gi|15834947|ref|NP_296706.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
muridarum Nigg]
gi|270285119|ref|ZP_06194513.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
muridarum Nigg]
gi|270289140|ref|ZP_06195442.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
muridarum Weiss]
gi|301336514|ref|ZP_07224716.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
muridarum MopnTet14]
gi|14194762|sp|Q9PKY3.1|ISPG_CHLMU RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|7190369|gb|AAF39191.1| gcpE protein [Chlamydia muridarum Nigg]
Length = 601
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/313 (51%), Positives = 212/313 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT +V VGN+ +GSEH I++Q+MTT T DV GTV ++ + + G ++VR+TVQG +E
Sbjct: 11 RRKTLSVKVGNLFVGSEHSIKIQSMTTTATTDVEGTVRQIYALQECGCEIVRVTVQGLKE 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AC +IK+ LVQ+N IPLVADIHF P A+ VA+ DK+R+NPGN+ D+R F Y
Sbjct: 71 VGACEQIKDRLVQQNVTIPLVADIHFFPQAAIHVADFVDKVRINPGNYVDKRNMFSGKIY 130
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+D++Y + L+ + E FSPLV KCK+ GRA+RIG NHGSLS+RIM YGD+ GMV SA E
Sbjct: 131 SDEQYTRSLERLFEKFSPLVAKCKRLGRAMRIGVNHGSLSERIMQRYGDTIEGMVFSALE 190
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
+A +C +D+HN +FSMK+SNP MV AYR L E+ W YPLHLGVTEAG G DG +
Sbjct: 191 YAEVCVNMDYHNIVFSMKSSNPRTMVAAYRALARELDQRKWLYPLHLGVTEAGSGMDGMI 250
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KS++GIGTLL +GLGDTIR SLT P EI C L + ++ + PFE H
Sbjct: 251 KSSVGIGTLLSEGLGDTIRCSLTGSPTLEIPVCLDLLKETAKYSKSTKKYNPFEIYHSKQ 310
Query: 385 FDFQRRSGQLPIQ 397
Q P++
Sbjct: 311 LTTQTTPKHFPVE 323
>gi|116328946|ref|YP_798666.1| deoxyxylulose biosynthesis protein [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|122283271|sp|Q04YW2.1|ISPG_LEPBL RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|116121690|gb|ABJ79733.1| Deoxyxylulose biosynthesis protein [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
Length = 663
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 225/580 (38%), Positives = 328/580 (56%), Gaps = 64/580 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D GTV++++ + G ++VR TV + +
Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTKGTVKQILELERTGCEIVRFTVPSQVD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + IPLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKAGSKIPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I +FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYDEELERISAIFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L++++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLNYYDIVVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSAIGIG+LL+DGLGDTIRVSLTE P EI R LA N + E +G + F
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLAEKFNKRIVKPEPVRGYSEF---- 308
Query: 382 RHYFDFQR-RSGQLPI----QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAA 436
R+ F ++R S ++ + E V VL + S ++ +L +
Sbjct: 309 RNPFTYERFYSSEIKVGTFEAGENHPVRVETVLPFENSNSFLANIAKLYQYGKSFSIEPE 368
Query: 437 KLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL---P 493
+++ P D L+E+ +A AL V I +G L+E+L L P
Sbjct: 369 SILIDSPSPD-------QLKEI-----SEAAAALSIPVGILLGKNVSLNEKLQNELRGFP 416
Query: 494 HAM------------VLVNLQE-LSTGAYKLLPEGTRLVVSLRG-DESYEEL---EILKD 536
+ +L LQE + G Y + + S +G E+ E+ +L
Sbjct: 417 KVVFDPFLQFQDGKKMLSFLQERQNAGLYTEIHTSGAKIESFKGLPETLSEIGIKNVLFS 476
Query: 537 IDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGT 596
I++ IL+D R+L LS++ FP++ H F N ++ + +
Sbjct: 477 IESKEILYDY-------------RKLGSILSQH--EFPILLHGSFSN---PEEALYDSAI 518
Query: 597 NVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
+G LL+DG+GD + ++ P +D + + S++LLQG L
Sbjct: 519 GIGGLLIDGIGDLIRIKTPKMKDIEEIFQLSYDLLQGTRL 558
>gi|440750422|ref|ZP_20929666.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Mariniradius saccharolyticus AK6]
gi|436481463|gb|ELP37644.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Mariniradius saccharolyticus AK6]
Length = 663
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/322 (54%), Positives = 227/322 (70%), Gaps = 9/322 (2%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L+ + KYC+S+ RRKT V VG+V IG ++PI VQ+MTT DT D G+VE+ +R+ +
Sbjct: 6 LLEKIKYCDSLTSYSRRKTIPVRVGDVIIGGDNPIVVQSMTTVDTMDTQGSVEQCIRMIE 65
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
G L+RIT +EA+ I+N L ++ YN PLVADIHF P+ A A +K+R+NP
Sbjct: 66 SGCQLIRITAPSIKEAENLQNIRNELRKRGYNTPLVADIHFTPNAAEVAARIVEKVRINP 125
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GN+AD++ +FE +EYTD YQ+EL+ I E F PLV+ CK++G A+RIGTNHGSLSDRIMS
Sbjct: 126 GNYADKK-KFEIIEYTDQSYQEELERIRERFLPLVKICKEHGTAMRIGTNHGSLSDRIMS 184
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YP 308
YGD+P GMVESA EF RIC +FH+ + SMK+SN VMVQAYRLLV ++ G+ YP
Sbjct: 185 RYGDTPLGMVESALEFLRICEDENFHDIVISMKSSNTQVMVQAYRLLVQKLDEGGFKTYP 244
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN--LGMR 366
LHLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L + LG
Sbjct: 245 LHLGVTEAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFESPVAKTLVDRYLGRE 304
Query: 367 -----AAELQQGVAPFEEKHRH 383
A + PFE R+
Sbjct: 305 NHAPIPAITHYPITPFEHNKRN 326
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 538 DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTN 597
D +ILH D + A RR F L EN+ PV+ + +P +D ++ A T+
Sbjct: 454 DVVIILHS-----DNAHNMAALRRAFVQLMENHSQIPVVVKVDYPAQT-QDKTMLYAATD 507
Query: 598 VGALLVDGLGDGLLL------EAPG----QDFDFLRDTSFNLLQG 632
VG LLVDGLG+G+++ EAP + SF +LQ
Sbjct: 508 VGGLLVDGLGEGIMIGLEAYREAPREVLLEQVKLHNSVSFGVLQA 552
>gi|410938682|ref|ZP_11370525.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira noguchii str. 2006001870]
gi|410786228|gb|EKR75176.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira noguchii str. 2006001870]
Length = 663
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 217/582 (37%), Positives = 330/582 (56%), Gaps = 48/582 (8%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKT+ V VG+V +G +PI +Q+M DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTKVVKVGDVPVGGNNPIAIQSMINTDTTDTKGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPFIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I E+FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDSEYNEELERISEIFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESAIEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFDELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G+DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ +
Sbjct: 243 EAGDGKDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKIPNPNSA 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V VL + S
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIAQFEAGENHPVRVETVLPFENS-------------NS 348
Query: 430 LYKSLAAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSE 486
+++A G P + VDS L +L + + A L++ + +S V L+E
Sbjct: 349 FLENVAKLYQYGKPLSIEPESILVDSPLPDQLKEISEAAAALSIPVGILLSKNV--SLNE 406
Query: 487 QLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDES---YEELEILKD-IDATMI 542
+L K L+ ++ + +G +++ L+G ++ + E+ D ID+ +
Sbjct: 407 KLQKE------LLRFPKIVFDPFLQFQDGEKMLSFLKGRQNAGLFSEIHTSGDKIDSLIG 460
Query: 543 LHDLPFNEDKIGRV----QAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGA 594
L D +E I V + L++Y N+ FP++ H F N ++ + +
Sbjct: 461 LPDT-LSETGIKNVLFSLNSKEILYDYRKLGNILSRFEFPILLHGFFSN---PEEALYDS 516
Query: 595 GTNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
+G LL+DG+GD + + P +D + + S++LLQG L
Sbjct: 517 AIGIGGLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGTRL 558
>gi|436836790|ref|YP_007322006.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Fibrella
aestuarina BUZ 2]
gi|384068203|emb|CCH01413.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Fibrella
aestuarina BUZ 2]
Length = 670
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 223/584 (38%), Positives = 311/584 (53%), Gaps = 69/584 (11%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y S+ + +RR+T TV +G+V +GS++PIRVQ+MTT DT D G+V + +R+ + G + +
Sbjct: 21 YAPSLTQYIRRETITVNIGDVPMGSDYPIRVQSMTTIDTMDTMGSVAQSIRMIEAGCEYI 80
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA I+ L + YN PL+ADIHF P+ A A +K+R+NPGN+ADR
Sbjct: 81 RITAPSVKEAQNLDNIRKELRARGYNTPLIADIHFTPNAAELAARLVEKVRINPGNYADR 140
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE ++YTD Y EL+ I E F PLV CK+YG A+RIGTNHGSLSDRI+S YGD+P
Sbjct: 141 K-RFEHIDYTDAAYAAELERIREKFLPLVRICKEYGTAMRIGTNHGSLSDRILSRYGDTP 199
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVT 314
GMVESA EF RIC +++N + SMK+SNP VMVQAYRLLV + G YPLHLGVT
Sbjct: 200 VGMVESALEFLRICEAENYYNIVLSMKSSNPQVMVQAYRLLVQRLAEEGLKPYPLHLGVT 259
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQ--- 371
EAGE EDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L + A+
Sbjct: 260 EAGEAEDGRIKSALGIGTLLEDGLGDTVRVSLTEEPEFEAPVAKALIDRYTNRAQTADPI 319
Query: 372 ---QGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEV-----DYRGVLHRDGSVLMSV---- 419
G P++ F + RR G V DY L + VL +V
Sbjct: 320 PALTGPLPYDP-----FQYARRQTSEVANFGGSNVPRVIADYSHTLVNETDVLKAVGHFY 374
Query: 420 -------SLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKR 472
+++ L A L S A+ ++ K++ VD + R +
Sbjct: 375 LPVPDKWAMNDLGADYLYTGSKPAQFMLPNGLKEI--VDYAVWRGHADAAN--------- 423
Query: 473 LVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELE 532
++ ++T + P + L+ + LL L +LR
Sbjct: 424 ----TLPMLTAAEYLHARHQPQGLHF----RLNFVRFSLLDLNDELAAALR--------- 466
Query: 533 ILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVI 592
+D + I+H D + RRLF L++ L PV+ + + + L +
Sbjct: 467 --QDRNVVGIVH-----TDNTHALPELRRLFIDLADRQLTLPVVIQRGYTHA-PAEHLPL 518
Query: 593 GAGTNVGALLVDGLGDGLLLEAPGQD----FDFLRDTSFNLLQG 632
A T+VG LL+DG GDG LL + D L +F +LQ
Sbjct: 519 YAATDVGGLLIDGFGDGALLCSTRTDDPDELKQLNGLAFGILQA 562
>gi|116330448|ref|YP_800166.1| deoxyxylulose biosynthesis protein [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|122281793|sp|Q04UL2.1|ISPG_LEPBJ RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|116124137|gb|ABJ75408.1| Deoxyxylulose biosynthesis protein [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 663
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 225/580 (38%), Positives = 327/580 (56%), Gaps = 64/580 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D GTV++++ + G ++VR TV + +
Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTKGTVKQILELERTGCEIVRFTVPSQVD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + IPLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKAGSKIPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYDEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L++++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLNYYDIVVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSAIGIG+LL+DGLGDTIRVSLTE P EI R LA N + E +G + F
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLAEKFNKRIVKPEPVRGYSEF---- 308
Query: 382 RHYFDFQR-RSGQLPI----QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAA 436
R+ F ++R S ++ + E V VL + S ++ +L +
Sbjct: 309 RNPFTYERFYSSEIKVGTFEAGENHPVRVETVLPFENSNSFLANIAKLYQYGKSFSIEPE 368
Query: 437 KLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL---P 493
+++ P D L+E+ +A AL V I +G L+E+L L P
Sbjct: 369 SILIDSPSPD-------QLKEI-----SEAAAALSIPVGILLGKNVSLNEKLQNELRGFP 416
Query: 494 HAM------------VLVNLQE-LSTGAYKLLPEGTRLVVSLRG-DESYEEL---EILKD 536
+ +L LQE + G Y + + S +G E+ E+ +L
Sbjct: 417 KVVFDPFLQFQDGKKMLSFLQERQNAGLYTEIHTSGAKIESFKGLPETLSEIGIKNVLFS 476
Query: 537 IDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGT 596
I++ IL+D R+L LS++ FP++ H F N ++ + +
Sbjct: 477 IESKEILYDY-------------RKLGSILSQH--EFPILLHGSFSN---PEEALYDSAI 518
Query: 597 NVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
+G LL+DG+GD + ++ P +D + + S++LLQG L
Sbjct: 519 GIGGLLIDGIGDLIRIKTPKMKDIEEIFQLSYDLLQGTRL 558
>gi|418719558|ref|ZP_13278757.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii str. UI 09149]
gi|418737758|ref|ZP_13294155.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|421093651|ref|ZP_15554375.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii str. 200801926]
gi|410363634|gb|EKP14663.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii str. 200801926]
gi|410743601|gb|EKQ92343.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii str. UI 09149]
gi|410746952|gb|EKQ99858.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|456889677|gb|EMG00560.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
borgpetersenii str. 200701203]
Length = 663
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 230/584 (39%), Positives = 332/584 (56%), Gaps = 72/584 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D GTV++++ + G ++VR+TV + +
Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTKGTVKQILELERTGCEIVRLTVPSQVD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + IPLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKVGSKIPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYNEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L++++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLNYYDIVVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSAIGIG+LL+DGLGDTIRVSLTE P EI R LA N + E +G + F
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLAEKFNKRIVKPEPVRGYSEF---- 308
Query: 382 RHYFDFQR-RSGQLPI----QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAA 436
R+ F ++R S ++ + E V VL + S ++ +L KSL+
Sbjct: 309 RNPFTYERFYSSEIKVGTFEAGENHPVRVETVLPFENSNSFLANIAKLYQ---YGKSLSI 365
Query: 437 KLVVGMPFKDLATVDSILLRELPSVDD----HDARLALKRLVDISMGVITPLSEQLTKPL 492
+ +SIL+ + PS D +A AL V I +G L+E+L L
Sbjct: 366 E------------PESILI-DSPSPDQLKEISEAAAALSTPVGILLGKNVSLNEKLQNEL 412
Query: 493 ---PHAM------------VLVNLQE-LSTGAYKLLPEGTRLVVSLRG-DESYEEL---E 532
P + +L L+E + G Y + + SL+G E+ E+
Sbjct: 413 RGFPKIVFDPFLQFQDGKKMLSFLKERQNAGLYTEIHTSGAKIESLKGLPETLSEIGIKN 472
Query: 533 ILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVI 592
+L I++ IL+D R+L LS+ FP++ H F N ++ +
Sbjct: 473 VLFSIESKEILYDY-------------RKLGSILSQ--YEFPILLHGSFSN---PEEALY 514
Query: 593 GAGTNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
+ +G LL+DG+GD + ++ P +D + + S++LLQG L
Sbjct: 515 DSAIGIGGLLIDGIGDLIRIKTPKMKDIEEIFQLSYDLLQGTRL 558
>gi|312129859|ref|YP_003997199.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leadbetterella byssophila DSM 17132]
gi|311906405|gb|ADQ16846.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leadbetterella byssophila DSM 17132]
Length = 639
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 218/565 (38%), Positives = 315/565 (55%), Gaps = 48/565 (8%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S+ + RR T+ V +G++ +GSE+PIR+Q+MTT DT D AG+V + +R+ + G +LV
Sbjct: 4 YCNSLTEYSRRITQQVKIGDLGLGSEYPIRIQSMTTVDTMDTAGSVAQCIRMIESGCELV 63
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA IK L YN PLVADIHF P+ A A +K+R+NPGN+AD+
Sbjct: 64 RITAPSVKEAQNLENIKRELRAAGYNTPLVADIHFTPNAAELAARIVEKVRINPGNYADK 123
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE ++YTD Y EL I E F+PLV CK+YG A+RIGTNHGSLSDRI+S YGD+P
Sbjct: 124 K-RFEIIDYTDASYAAELDRIRERFTPLVRICKEYGTAMRIGTNHGSLSDRILSRYGDTP 182
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA---EMYVHGWDYPLHLG 312
GMVESA EF +IC +++N + SMK+SNP VMV AYRLLV E +H YPLHLG
Sbjct: 183 AGMVESALEFLKICEDENYYNIVISMKSSNPQVMVHAYRLLVKRLEEEKLH--PYPLHLG 240
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAGEGEDGR+KS++GIGTLL+DGLGDT+RVSLTE PE E +L + R +
Sbjct: 241 VTEAGEGEDGRIKSSMGIGTLLEDGLGDTVRVSLTEDPEFEAPVAEKLVS---RYPSTKI 297
Query: 373 GVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK 432
P +E H F ++RR + G +V + D S+ +V ++ LKA Y
Sbjct: 298 YSIPAKEDALHPFHYERRIRKEVFNFGGHQVPR---VIADFSLKSNVEIEDLKAIGHFYL 354
Query: 433 SLAAKLVVGMPFKDLATVDS-----ILLRELPSVDDHDARLALKRLVDISMGVITPLSEQ 487
L K + D S +L L + D+ L +E
Sbjct: 355 PLPDKWKMNDLGADYIYTGSNPISFMLPNGLKEIQDYPTWLN---------------AED 399
Query: 488 LTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLP 547
LP L+++++ G K E + + L+ D S E+ ++ +TM +
Sbjct: 400 KVNKLP----LMSIEDYFNGTQK-HAELNFIALELK-DWSEEKANLI----STMENVNFV 449
Query: 548 FNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLG 607
QA R + + + PVI + +G+ +++ + A T++G + ++G G
Sbjct: 450 LEAKGATAYQAYRAILSQWATH----PVILRKDY-SGLELEEIQLHASTDLGGIFLEGFG 504
Query: 608 DGLLLEAPGQDFDFLRDTSFNLLQG 632
+G+++ +D L +F +LQ
Sbjct: 505 EGIMISG-HEDTKALNSLAFGILQA 528
>gi|343084978|ref|YP_004774273.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyclobacterium marinum DSM 745]
gi|342353512|gb|AEL26042.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyclobacterium marinum DSM 745]
Length = 663
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/320 (53%), Positives = 221/320 (69%), Gaps = 3/320 (0%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q+YC S+ RRKT V +G++ IG ++PI VQ+MTT DT D G++E+ +R+ D G +
Sbjct: 10 QQYCNSLTNYSRRKTIPVRIGDITIGGDNPIVVQSMTTVDTMDTQGSIEQCIRMIDSGCE 69
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
LVRIT +EA+ IK+ L ++ YN PLVADIHF P+ A A+ +K+RVNPGN+A
Sbjct: 70 LVRITAPSIKEAENLQAIKDGLRKRGYNTPLVADIHFTPNAAEVAAKIVEKVRVNPGNYA 129
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FE LEYTD YQ EL+ I E F PLV CK + A+RIGTNHGSLSDRIMS YGD
Sbjct: 130 DKK-KFEVLEYTDASYQAELERIRERFLPLVNICKTHCTAMRIGTNHGSLSDRIMSRYGD 188
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLG 312
+P GMVESA EF RIC ++H+ + SMK+SN VMVQAYRLLV ++ G+ YPLHLG
Sbjct: 189 TPLGMVESALEFLRICEAENYHDIVISMKSSNTQVMVQAYRLLVNKLEEGGFKPYPLHLG 248
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAG+GEDGR+KSA+GIG LL+DGLGDT+RVSLTE PE E + L N E
Sbjct: 249 VTEAGDGEDGRVKSAVGIGALLEDGLGDTVRVSLTEDPEFESPVVKTLINRYANRPE-AS 307
Query: 373 GVAPFEEKHRHYFDFQRRSG 392
G+ P F + +R+
Sbjct: 308 GIIPISNYPIDPFAYNKRTA 327
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
++QA RR L + +N PV+ + + ++ A T+VG LL+DGLGDG+++
Sbjct: 466 QMQAIRRAIVSLIDAEINLPVVPKVSYSEKDAEKTMLFSA-TDVGGLLIDGLGDGMVI-- 522
Query: 615 PGQDFDFLRDTSFNLLQ 631
G D LRD L Q
Sbjct: 523 -GLDQLQLRDKEEKLAQ 538
>gi|398339839|ref|ZP_10524542.1| deoxyxylulose biosynthesis protein [Leptospira kirschneri serovar
Bim str. 1051]
gi|421089206|ref|ZP_15550019.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. 200802841]
gi|410002103|gb|EKO52627.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. 200802841]
Length = 663
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 210/577 (36%), Positives = 321/577 (55%), Gaps = 38/577 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RR++R V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRRSREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I VFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDSEYNEELERISTVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF I L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PLGMVESALEFIHIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + Q
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKTSNQNSA 302
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
+ E R+ F + R E+ + + + ++ + ++
Sbjct: 303 KGYSE-FRNPFSYNRFYSS--------EIKFAQFEAGENHPVRVETILPFENSNSFLANV 353
Query: 435 AAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
A G P + VDS L +L + + A L++ + +S V L+E+L K
Sbjct: 354 AKLYQYGKPLSIEPESILVDSPLPDQLKEISEAAAALSIPVGILLSKNV--SLNEKLQKE 411
Query: 492 LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
L++ ++ + +G +++ L+ + Y L EI D L LP
Sbjct: 412 ------LLSFPKIVFDPFLQFQDGEKMLSFLK-ERQYAGLFSEIHTSGDKIDFLRGLPDT 464
Query: 550 EDKIG------RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
+IG + + L++Y N+ FP++ H F N ++ + + +G
Sbjct: 465 LSEIGIKNVLFSLDSKEILYDYRKLGNILSNFEFPILLHGSFSN---PEEALYNSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
LL+DG+GD + + P +D + + S++LLQG L
Sbjct: 522 GLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGTRL 558
>gi|408675508|ref|YP_006875256.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Emticicia
oligotrophica DSM 17448]
gi|387857132|gb|AFK05229.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Emticicia
oligotrophica DSM 17448]
Length = 666
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 215/293 (73%), Gaps = 2/293 (0%)
Query: 69 LLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIA 128
LL ++KYC+S+ RR+T V +G++ +GS++PIRVQ+MTT DT D G+VE+ +R+
Sbjct: 2 LLEIQKKYCKSLTAYSRRQTNQVRIGDLYLGSDYPIRVQSMTTVDTMDTIGSVEQSIRMI 61
Query: 129 DQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVN 188
+ G +LVRIT +EA IKN L ++ Y PLVADIHF P+ A A +K+R+N
Sbjct: 62 ESGCELVRITAPSVKEAQNLENIKNELRKRGYQTPLVADIHFTPNAAELAARIVEKVRIN 121
Query: 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248
PGN+AD++ +FE ++YT++ Y EL+ I E F PLV CK+YG A+RIGTNHGSLSDRI+
Sbjct: 122 PGNYADKK-RFEVIDYTNESYANELERIRERFLPLVRICKEYGTAMRIGTNHGSLSDRIL 180
Query: 249 SYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-Y 307
S YGD+P GMVESA EF RIC +++N + SMK+SNP VMVQAYRLLV + Y
Sbjct: 181 SRYGDTPLGMVESALEFLRICEDENYYNIVISMKSSNPQVMVQAYRLLVQRLEEEKLKPY 240
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
PLHLGVTEAGEGEDGR+KS++GIGTLL+DGLGDT+RVSLTE PE E R L
Sbjct: 241 PLHLGVTEAGEGEDGRIKSSMGIGTLLEDGLGDTVRVSLTEDPEFEAPVARSL 293
>gi|421132246|ref|ZP_15592416.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. 2008720114]
gi|410356280|gb|EKP03627.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. 2008720114]
Length = 663
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 210/577 (36%), Positives = 321/577 (55%), Gaps = 38/577 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RR++R V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRRSREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I VFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDSEYNEELERISTVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF I L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PLGMVESALEFIHIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + Q
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKTSNQNSA 302
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
+ E R+ F + R E+ + + + ++ + ++
Sbjct: 303 KGYSE-FRNPFSYNRFYSS--------EIKFAQFEAGENHPVRVETILPFENSNSFLANV 353
Query: 435 AAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
A G P + VDS L +L + + A L++ + +S V L+E+L K
Sbjct: 354 AKLYQYGKPLSIEPESILVDSPLPDQLKEISEAAAALSIPVGILLSKNV--SLNEKLQKE 411
Query: 492 LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
L++ ++ + +G +++ L+ + Y L EI D L LP
Sbjct: 412 ------LLSFPKIVFDPFLQFQDGEKMLSFLK-ERQYAGLFSEIHTSGDKIDFLRGLPDT 464
Query: 550 EDKIG------RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
+IG + + L++Y N+ FP++ H F N ++ + + +G
Sbjct: 465 LSEIGIKNVLFSLDSKEILYDYRKLGNILSNFEFPILLHGSFSN---PEEALYNSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
LL+DG+GD + + P +D + + S++LLQG L
Sbjct: 522 GLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGTRL 558
>gi|417770949|ref|ZP_12418849.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pomona str. Pomona]
gi|418681433|ref|ZP_13242662.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pomona str. Kennewicki
LC82-25]
gi|418707092|ref|ZP_13267928.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Hebdomadis str. R499]
gi|400326839|gb|EJO79099.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pomona str. Kennewicki
LC82-25]
gi|409947063|gb|EKN97067.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pomona str. Pomona]
gi|410763298|gb|EKR34029.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Hebdomadis str. R499]
gi|455669671|gb|EMF34738.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pomona str. Fox 32256]
Length = 663
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 218/585 (37%), Positives = 330/585 (56%), Gaps = 54/585 (9%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERVGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNSNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQL----K 425
+ E R+ F + R S ++ I + E V +L + S ++ +L K
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENSNSFLENVAKLYQYGK 361
Query: 426 APELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLS 485
+P + +S+ VDS L +L + +A AL V I + L+
Sbjct: 362 SPSIEPESI--------------LVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLN 405
Query: 486 EQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEEL 531
E+L K L++ ++ + +G +++ L+ GD+ + L
Sbjct: 406 EKLQKE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSL 458
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLV 591
L D + + + ++ F+ D + R+L LS FP++ H F N ++ +
Sbjct: 459 RGLPDTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEAL 513
Query: 592 IGAGTNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
+ +G LL+DG+GD + + +D + + S++LLQG L
Sbjct: 514 YNSAIGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRL 558
>gi|417765124|ref|ZP_12413090.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Bulgarica str. Mallika]
gi|400352724|gb|EJP04903.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Bulgarica str. Mallika]
Length = 663
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 330/581 (56%), Gaps = 46/581 (7%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L ++ DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASKFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
+G LL+DG+GD + + +D + + S++LLQG L
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRL 558
>gi|418741715|ref|ZP_13298089.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri serovar Valbuzzi str. 200702274]
gi|410751163|gb|EKR08142.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri serovar Valbuzzi str. 200702274]
Length = 665
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 210/577 (36%), Positives = 321/577 (55%), Gaps = 38/577 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RR++R V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 6 RYNQTPFGYQRRRSREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 65
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 66 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 125
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I VFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 126 KK-KFVVRDYTDSEYNEELERISTVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 184
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF I L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 185 PLGMVESALEFIHIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 244
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + Q
Sbjct: 245 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKTSNQNSA 304
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
+ E R+ F + R E+ + + + ++ + ++
Sbjct: 305 KGYSE-FRNPFSYNRFYSS--------EIKFAQFEAGENHPVRVETILPFENSNSFLANV 355
Query: 435 AAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
A G P + VDS L +L + + A L++ + +S V L+E+L K
Sbjct: 356 AKLYQYGKPLSIEPESILVDSPLPDQLKEISEAAAALSIPVGILLSKNV--SLNEKLQKE 413
Query: 492 LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
L++ ++ + +G +++ L+ + Y L EI D L LP
Sbjct: 414 ------LLSFPKIVFDPFLQFQDGEKMLSFLK-ERQYAGLFSEIHTSGDKIDFLRGLPDT 466
Query: 550 EDKIG------RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
+IG + + L++Y N+ FP++ H F N ++ + + +G
Sbjct: 467 LSEIGIKNVLFSLDSKEILYDYRKLGNILSNFEFPILLHGSFSN---PEEALYNSAIGIG 523
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
LL+DG+GD + + P +D + + S++LLQG L
Sbjct: 524 GLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGTRL 560
>gi|418685200|ref|ZP_13246378.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|410740267|gb|EKQ84987.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
Length = 665
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 210/577 (36%), Positives = 321/577 (55%), Gaps = 38/577 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RR++R V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 6 RYNQTPFGYQRRRSREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 65
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 66 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 125
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I VFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 126 KK-KFVVRDYTDSEYNEELERISTVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 184
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF I L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 185 PLGMVESALEFIHIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 244
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + Q
Sbjct: 245 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKTSNQNSA 304
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
+ E R+ F + R E+ + + + ++ + ++
Sbjct: 305 KGYSE-FRNPFSYNRFYSS--------EIKFAQFEAGENHPVRVETILPFENSNSFLANV 355
Query: 435 AAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
A G P + VDS L +L + + A L++ + +S V L+E+L K
Sbjct: 356 AKLYQYGKPLSIEPESILVDSPLPDQLKEISEAAAALSIPVGILLSKNV--SLNEKLQKE 413
Query: 492 LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
L++ ++ + +G +++ L+ + Y L EI D L LP
Sbjct: 414 ------LLSFPKIVFDPFLQFQDGEKMLSFLK-ERQYAGLFSEIHTSGDKIDFLRGLPDT 466
Query: 550 EDKIG------RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
+IG + + L++Y N+ FP++ H F N ++ + + +G
Sbjct: 467 LSEIGIKNVLFSLDSKEILYDYRKLGNILSNFEFPILLHGSFSN---PEEALYNSAIGIG 523
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
LL+DG+GD + + P +D + + S++LLQG L
Sbjct: 524 GLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGTRL 560
>gi|418679230|ref|ZP_13240494.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri serovar Grippotyphosa str. RM52]
gi|400320355|gb|EJO68225.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri serovar Grippotyphosa str. RM52]
Length = 663
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 210/577 (36%), Positives = 321/577 (55%), Gaps = 38/577 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RR++R V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRRSREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I VFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFVVRDYTDSEYNEELERISTVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF I L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PLGMVESALEFIHIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + Q
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKTSNQNSA 302
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
+ E R+ F + R E+ + + + ++ + ++
Sbjct: 303 KGYSE-FRNPFSYNRFYSS--------EIKFAQFEAGENHPVRVETILPFENSNSFLANV 353
Query: 435 AAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
A G P + VDS L +L + + A L++ + +S V L+E+L K
Sbjct: 354 AKLYQYGKPLSIEPESILVDSPLPDQLKEISEAAAALSIPVGILLSKNV--SLNEKLQKE 411
Query: 492 LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
L++ ++ + +G +++ L+ + Y L EI D L LP
Sbjct: 412 ------LLSFPKIVFDPFLQFQDGEKMLSFLK-ERQYAGLFSEIHTSGDKIDFLRGLPDT 464
Query: 550 EDKIG------RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
+IG + + L++Y N+ FP++ H F N ++ + + +G
Sbjct: 465 LSEIGIKNVLFSLDSKEILYDYRKLGNILSNFEFPILLHGSFSN---PEEALYNSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
LL+DG+GD + + P +D + + S++LLQG L
Sbjct: 522 GLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGTRL 558
>gi|417786381|ref|ZP_12434073.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. C10069]
gi|418670491|ref|ZP_13231862.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|421121483|ref|ZP_15581777.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. Brem 329]
gi|409950408|gb|EKO04935.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. C10069]
gi|410345582|gb|EKO96673.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. Brem 329]
gi|410753873|gb|EKR15531.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Pyrogenes str.
2006006960]
Length = 663
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 329/581 (56%), Gaps = 46/581 (7%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
+G LL+DG+GD + + +D + + S++LLQG L
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRL 558
>gi|392964654|ref|ZP_10330074.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Fibrisoma
limi BUZ 3]
gi|387846037|emb|CCH52120.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Fibrisoma
limi BUZ 3]
Length = 687
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 170/317 (53%), Positives = 216/317 (68%), Gaps = 2/317 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y S+ + VRRKT TV +G+V +GS++PIRVQ+MTT DT D G+VE+ +R+ + G + V
Sbjct: 21 YTPSLTEYVRRKTITVTIGDVPMGSDYPIRVQSMTTIDTMDTLGSVEQTIRMIEAGCEYV 80
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA I+ L + Y PLVADIHF P+ A A +K+R+NPGN+ADR
Sbjct: 81 RITAPSVKEAQNLENIRKELRGRGYTTPLVADIHFTPNAAELAARIVEKVRINPGNYADR 140
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE +EYTD Y EL I E F PLV CK+YG A+RIGTNHGSLSDRI+S YGD+P
Sbjct: 141 K-RFEHIEYTDASYAAELDRIREKFLPLVRICKEYGTAMRIGTNHGSLSDRILSRYGDTP 199
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVT 314
GMVESA EF RIC +++N + SMK+SNP VMVQAYRLLV + G YPLHLGVT
Sbjct: 200 VGMVESALEFLRICEDENYYNIVLSMKSSNPQVMVQAYRLLVQRLDEEGLKPYPLHLGVT 259
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAGE EDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE+E + L + A +
Sbjct: 260 EAGEAEDGRIKSAVGIGTLLEDGLGDTVRVSLTEEPEREAPVAKALIDRYTHRASHSAPI 319
Query: 375 APFEEKHRHYFDFQRRS 391
+ F + RR+
Sbjct: 320 PAVTTYPINPFQYTRRA 336
>gi|418688892|ref|ZP_13250021.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. FPW2026]
gi|400361884|gb|EJP17843.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. FPW2026]
Length = 663
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 222/597 (37%), Positives = 329/597 (55%), Gaps = 78/597 (13%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERVGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNSNSV 302
Query: 375 APFEEKHRHYFDFQR-----------RSGQ---------LPIQKEGEEVDYRGVLHRDG- 413
+ E R+ F + R +G+ LP + ++ L++ G
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENSNSFLENVAKLYQYGK 361
Query: 414 -------SVLMSVSL-DQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHD 465
S+L+ L DQLK E+ + A + VG+ +++ L +EL S
Sbjct: 362 SLSIEPESILVDSPLPDQLK--EISETATALSIPVGILLSKNVSLNEKLQKELLSF---- 415
Query: 466 ARLALKRLVDISMG--VITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR 523
++ + G +++ L E+ L E+ T KL SLR
Sbjct: 416 PKIVFDPFLQFQDGEKMLSFLKERQNAGL--------FSEIHTSGDKL--------DSLR 459
Query: 524 G-DESYEEL---EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHI 579
G ++ E+ +L +D+ IL+D R+L LS FP++ H
Sbjct: 460 GLPDTLSEIGIKNVLFSLDSKEILYDY-------------RKLGSILSR--FEFPILLHG 504
Query: 580 QFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
F N ++ + + +G LL+DG+GD + + +D + + S++LLQG L
Sbjct: 505 SFSN---PEEALYNSAIGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRL 558
>gi|24215859|ref|NP_713340.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Leptospira
interrogans serovar Lai str. 56601]
gi|386074991|ref|YP_005989309.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Leptospira
interrogans serovar Lai str. IPAV]
gi|417762928|ref|ZP_12410913.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. 2002000624]
gi|417776246|ref|ZP_12424088.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. 2002000621]
gi|418674219|ref|ZP_13235526.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. 2002000623]
gi|418707890|ref|ZP_13268704.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str. UI
08368]
gi|418723547|ref|ZP_13282385.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. UI 12621]
gi|421115898|ref|ZP_15576293.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Canicola str. Fiocruz
LV133]
gi|50401053|sp|Q8F1H5.1|ISPG_LEPIN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|24197059|gb|AAN50358.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Leptospira
interrogans serovar Lai str. 56601]
gi|353458781|gb|AER03326.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Leptospira
interrogans serovar Lai str. IPAV]
gi|409941306|gb|EKN86938.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. 2002000624]
gi|409962916|gb|EKO26646.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. UI 12621]
gi|410012540|gb|EKO70636.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Canicola str. Fiocruz
LV133]
gi|410574016|gb|EKQ37056.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. 2002000621]
gi|410578639|gb|EKQ46493.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. 2002000623]
gi|410771750|gb|EKR46950.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str. UI
08368]
gi|455789858|gb|EMF41762.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Lora str. TE 1992]
Length = 663
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 329/581 (56%), Gaps = 46/581 (7%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
+G LL+DG+GD + + +D + + S++LLQG L
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRL 558
>gi|456822073|gb|EMF70568.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Canicola str. LT1962]
Length = 663
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 329/581 (56%), Gaps = 46/581 (7%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
+G LL+DG+GD + + +D + + S++LLQG L
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRL 558
>gi|418714778|ref|ZP_13275270.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. UI 08452]
gi|410788952|gb|EKR82657.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. UI 08452]
Length = 663
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 222/597 (37%), Positives = 329/597 (55%), Gaps = 78/597 (13%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-----------RSGQ---------LPIQKEGEEVDYRGVLHRDG- 413
+ E R+ F + R +G+ LP + ++ L++ G
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENSNSFLENVAKLYQYGK 361
Query: 414 -------SVLMSVSL-DQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHD 465
S+L+ L DQLK E+ + A + VG+ +++ L +EL S
Sbjct: 362 SLSIEPESILVDSPLPDQLK--EISETATALSIPVGILLSKNVSLNEKLQKELLSF---- 415
Query: 466 ARLALKRLVDISMG--VITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR 523
++ + G +++ L E+ L E+ T KL SLR
Sbjct: 416 PKIVFDPFLQFQDGEKMLSFLKERQNAGL--------FSEIHTSGDKL--------DSLR 459
Query: 524 G-DESYEEL---EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHI 579
G ++ E+ +L +D+ IL+D R+L LS FP++ H
Sbjct: 460 GLPDTLSEIGIKNVLFSLDSKEILYDY-------------RKLGSILSR--FEFPILLHG 504
Query: 580 QFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
F N ++ + + +G LL+DG+GD + + +D + + S++LLQG L
Sbjct: 505 SFSN---PEEALYNSAIGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRL 558
>gi|256419950|ref|YP_003120603.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chitinophaga pinensis DSM 2588]
gi|256034858|gb|ACU58402.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chitinophaga pinensis DSM 2588]
Length = 646
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 236/577 (40%), Positives = 314/577 (54%), Gaps = 54/577 (9%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q Y S+ + R T V VG++ IG+ +PIR+QTMTT DT + GTVE+ +R + GA+
Sbjct: 2 QLYSNSLTEYKRLATLEVKVGDLLIGNNNPIRIQTMTTTDTMNTLGTVEQAIRCIEAGAE 61
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
LVRIT K+EA+ I+N L ++ Y PLVADIHF P+ A A +K+R+NPGN+
Sbjct: 62 LVRITAPSKKEAENLLPIRNELRKRGYTTPLVADIHFTPNAAEIAARIVEKVRINPGNYV 121
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FE L YTD EY++E+ I + F+PLV+ C+++G A+RIGTNHGSLSDRIMS YGD
Sbjct: 122 DKK-KFETLTYTDAEYEEEIDRIRKQFTPLVKICQEHGTAMRIGTNHGSLSDRIMSRYGD 180
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLG 312
+P GMVESA EF RI L++ N + SMK+SNP VMVQAYRLLV M G YPLHLG
Sbjct: 181 TPMGMVESAMEFLRIAEDLNYRNIVLSMKSSNPQVMVQAYRLLVHTMQDQLGHCYPLHLG 240
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
VTEAG+GEDGR+KSA+GIGTLL+DG+GDTIRVSLTE PE E+ CR L A+
Sbjct: 241 VTEAGDGEDGRIKSAVGIGTLLEDGIGDTIRVSLTEDPEFELPVCRDLVKRYTSRAD-HT 299
Query: 373 GVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK 432
+ E F+++RR G++V V+ D S ++ L Y
Sbjct: 300 PIPAIENVPYSPFEYKRRESIAVNNIGGKQVP---VVVADCSSTSGITPAHLLPVGYNYN 356
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPL-----SEQ 487
+ K + A D I REL S AL ++ VI P +E
Sbjct: 357 ADTDKWNIAD-----AAADYIFSRELLS-------FALPG----TLKVIVPHDIWKDAED 400
Query: 488 LTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSL----RGDESYEELEILKDIDATMIL 543
K +P L T LL V++ G E L + D T++L
Sbjct: 401 KEKYMP----------LFTAEEYLLATDKSAVINFIDHNTGVTLPEALLLQMANDHTIVL 450
Query: 544 HDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLV 603
NE + V RR F L + + PVI F + D+ +I T GALL+
Sbjct: 451 CLHSSNEHAMPEV---RRTFVTLLDRQIQQPVILKC-FADATSSDEHLIHYATETGALLL 506
Query: 604 DGLGDGLLL-------EAPGQDFDFLRDTSFNLLQGV 633
DG GDG L +APG L + +F +LQ
Sbjct: 507 DGFGDGTWLVSEATGAQAPGH--ALLNNIAFGILQAT 541
>gi|418727892|ref|ZP_13286476.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. UI 12758]
gi|421127937|ref|ZP_15588155.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|421133578|ref|ZP_15593725.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|410022264|gb|EKO89042.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|410434404|gb|EKP83542.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|410777358|gb|EKR57322.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans str. UI 12758]
Length = 663
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 329/581 (56%), Gaps = 46/581 (7%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERVGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
+G LL+DG+GD + + +D + + S++LLQG L
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRL 558
>gi|418699313|ref|ZP_13260278.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Bataviae str. L1111]
gi|410761683|gb|EKR27856.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Bataviae str. L1111]
Length = 663
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 329/581 (56%), Gaps = 46/581 (7%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGFFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
+G LL+DG+GD + + +D + + S++LLQG L
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRL 558
>gi|418695636|ref|ZP_13256651.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. H1]
gi|421106991|ref|ZP_15567551.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. H2]
gi|409956573|gb|EKO15499.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. H1]
gi|410007905|gb|EKO61584.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira kirschneri str. H2]
Length = 663
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 209/577 (36%), Positives = 321/577 (55%), Gaps = 38/577 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRK+R V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKSREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I VFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDSEYNEELERISTVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF I L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PLGMVESALEFIHIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ +
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKTSNPNSA 302
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSL 434
+ E R+ F + R E+ + + + ++ + ++
Sbjct: 303 KGYSE-FRNPFSYNRFYSS--------EIKFAQFEAGENHPVRVETILPFENSNSFLANV 353
Query: 435 AAKLVVGMPFK---DLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
A G P + V+S L +L + + A L++ + +S V L+E+L K
Sbjct: 354 AKLYQYGKPLSIEPESILVNSPLPDQLKEISEAAATLSIPVGILLSKNV--SLNEKLQKE 411
Query: 492 LPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
L++ ++ + +G +++ L+ + Y L EI + D L LP
Sbjct: 412 ------LLSFPKIVFDPFLQFQDGEKMLSFLK-ERQYAGLFSEIHTNGDKIDFLRGLPDT 464
Query: 550 EDKIG------RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
+IG + + L++Y N+ FP++ H F N ++ + + +G
Sbjct: 465 LSEIGIKNVLFSLDSKEILYDYRKLGNILSSFEFPILLHGSFSN---PEEALYNSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
LL+DG+GD + + P +D + + S++LLQG L
Sbjct: 522 GLLIDGIGDLIRISTPKIKDIEEIFQLSYDLLQGARL 558
>gi|346226057|ref|ZP_08847199.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anaerophaga
thermohalophila DSM 12881]
Length = 626
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 212/568 (37%), Positives = 297/568 (52%), Gaps = 67/568 (11%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S + +R KT V GN+ IG + PIR+Q+MTT +T + T E+ RIAD G +LV
Sbjct: 8 YCNSFFQYLRNKTVPVKAGNITIGGDSPIRIQSMTTTNTLNTRETSEQTKRIADAGGELV 67
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT QG+REA IK +L Y+IPLVAD+HF PS A AE +K+R+NPGNF
Sbjct: 68 RITTQGRREALNLKNIKEALQSAGYDIPLVADVHFNPSAAETAAEIVEKVRINPGNFTGG 127
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+F Q+E E + +Q I E P + CKK+ A+RIG NHGSLSDRIMS YGD+P
Sbjct: 128 AKKFRQIETGSPEDKAGMQQIREKLVPFLHHCKKHNTAIRIGVNHGSLSDRIMSKYGDTP 187
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVES E+ RIC++ +F N + S+KASN +MV A RLLV M +PLHLGVTE
Sbjct: 188 EGMVESCMEYLRICKEENFENIVLSVKASNTRIMVHAVRLLVQRMQNEHMYFPLHLGVTE 247
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVA 375
AG GEDGR+KSA+GIG LL DG+GDTIRVSLTEPPE EI ++L +R + G A
Sbjct: 248 AGSGEDGRLKSAVGIGALLIDGIGDTIRVSLTEPPENEIPVAQKL----VRYVVQKTGHA 303
Query: 376 PFEEKH-RHY--FDFQRRSGQLPIQKEGEE-----VDYRGVLHRDGSVLMSVSLDQLKAP 427
P + +HY + +R + + GE D R R+ ++ + P
Sbjct: 304 PIRGTNPQHYSPLSYVKRVSEPVLHIGGENPVAVVADIRNTDDRE--------INFSEPP 355
Query: 428 ELLYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVD---ISMGVITPL 484
EL+ + A + +P K+L+ ++ + + + L R+ D + G+
Sbjct: 356 ELIICNPAQ---LNLPHKNLSGALQLVEYKYYEEEKRNGVFPLFRIHDDWHLFQGI---- 408
Query: 485 SEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILH 544
A V + EL+ L E +++ LR ++++T
Sbjct: 409 ----------AFVEITYPELTERNINRLREKKDVILILRSG----------NVNSTA--- 445
Query: 545 DLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVD 604
R F + L PVI H + + + +D + A + GAL +D
Sbjct: 446 -------------EQRAFFMTMQNAGLKHPVIIHGHYEDKM-SEDFQLKAAADKGALFLD 491
Query: 605 GLGDGLLLEAPGQDFDFLRDTSFNLLQG 632
G GDG+ L AP + +TSF +LQ
Sbjct: 492 GYGDGICLNAPFIRIGDVVNTSFGILQA 519
>gi|441498708|ref|ZP_20980901.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Fulvivirga
imtechensis AK7]
gi|441437505|gb|ELR70856.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Fulvivirga
imtechensis AK7]
Length = 619
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 217/513 (42%), Positives = 291/513 (56%), Gaps = 43/513 (8%)
Query: 109 MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168
MTT DT D G+VE+V+R+ D G + VRIT +EA IK L ++ Y +PL+ADI
Sbjct: 1 MTTVDTMDTLGSVEQVIRMVDAGCEYVRITAPSIKEAQNLENIKKELRKRGYQVPLIADI 60
Query: 169 HFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK 228
HF P+ A A +K+RVNPGN+AD++ +F+Q+EYTD+ YQ EL+ I E F+PLV CK
Sbjct: 61 HFTPNAAELAARIVEKVRVNPGNYADKK-KFQQIEYTDESYQAELERIREKFTPLVNICK 119
Query: 229 KYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVV 288
+YG A+RIGTNHGSLSDRIMS YGD+P GMVESA EF RIC +L++++ + SMKASN V
Sbjct: 120 EYGTAMRIGTNHGSLSDRIMSRYGDTPLGMVESALEFVRICEELNYYDIVLSMKASNTQV 179
Query: 289 MVQAYRLLVAEMYVHGWD-YPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLT 347
MVQAYRLLV ++ G YPLHLGVTEAGEGEDGR+KSA+GIG LL+DGLGDT+RVSLT
Sbjct: 180 MVQAYRLLVNKLNEEGLQPYPLHLGVTEAGEGEDGRIKSAVGIGVLLEDGLGDTVRVSLT 239
Query: 348 EPPEKEIDPCRRL-------ANLGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEG 400
E PE E + + A G A + V PF RH + GQ + +
Sbjct: 240 EEPEFEAPVAKTMVHRYYDRAGHGPIAPIDENPVDPFSYGRRHTREVGNVGGQ-NVPRVI 298
Query: 401 EEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLRELPS 460
++ GV RD L + L P+ K L + A V +L L
Sbjct: 299 ADISRLGV--RDYKDLKGIGHFYLPEPD---KWRMNDLGADYIYSGYAPVPFMLPNGLKE 353
Query: 461 VDDHDARLALKRLVD-ISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEGTRLV 519
+ ++D L V+ + + + + + V V L++L L+
Sbjct: 354 ILEYDTWSTLDDKVNKVPLLTVRQFLNEAHQHNTINFVAVGLKDLD----------AVLL 403
Query: 520 VSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHI 579
L+G DAT+IL + ++K G + R FE L NNL PVI
Sbjct: 404 ERLKG-------------DATVIL--VLSTDNKHGLAEQRRAFFE-LIRNNLEIPVIIKR 447
Query: 580 QFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL 612
+ + + D L I A T+VG LL+DGLGDG++L
Sbjct: 448 SYAD-LTDDQLQIYAATDVGGLLIDGLGDGVML 479
>gi|45656843|ref|YP_000929.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|421085508|ref|ZP_15546360.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. HAI1594]
gi|421103006|ref|ZP_15563607.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Icterohaemorrhagiae str.
Verdun LP]
gi|50400904|sp|Q72TR2.1|ISPG_LEPIC RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|45600079|gb|AAS69566.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|410367190|gb|EKP22577.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Icterohaemorrhagiae str.
Verdun LP]
gi|410431947|gb|EKP76306.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. HAI1594]
gi|456985684|gb|EMG21433.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Copenhageni str. LT2050]
Length = 663
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 217/581 (37%), Positives = 329/581 (56%), Gaps = 46/581 (7%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD +Y +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLKYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+ + V
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNKKISNLNSV 302
Query: 375 APFEEKHRHYFDFQR-RSGQLPIQK----EGEEVDYRGVLHRDGSVLMSVSLDQLKAPEL 429
+ E R+ F + R S ++ I + E V +L + S + L+ +
Sbjct: 303 KGYSE-FRNPFSYNRFYSSEIKIVQFEAGENHPVRVETILPFENS---NSFLENVAKLYQ 358
Query: 430 LYKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT 489
KSL+ + + VDS L +L + +A AL V I + L+E+L
Sbjct: 359 YGKSLSIE-------PESILVDSPLPDQLKEI--SEAATALSIPVGILLSKNVSLNEKLQ 409
Query: 490 KPLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLR--------------GDESYEELEILK 535
K L++ ++ + +G +++ L+ GD+ + L L
Sbjct: 410 KE------LLSFPKIVFDPFLQFQDGEKMLSFLKERQNAGLFSEIHTSGDK-LDSLRGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
D + + + ++ F+ D + R+L LS FP++ H F N ++ + +
Sbjct: 463 DTLSEIGIKNVLFSLDSKEILYDYRKLGSILSR--FEFPILLHGSFSN---PEEALYNSA 517
Query: 596 TNVGALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
+G LL+DG+GD + + +D + + S++LLQG L
Sbjct: 518 IGIGGLLIDGIGDLIRISTSKIKDIEEIFQLSYDLLQGTRL 558
>gi|359689242|ref|ZP_09259243.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418749507|ref|ZP_13305795.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira licerasiae str. MMD4847]
gi|418759490|ref|ZP_13315670.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384113981|gb|EIE00246.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404274392|gb|EJZ41710.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira licerasiae str. MMD4847]
Length = 665
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 224/603 (37%), Positives = 320/603 (53%), Gaps = 91/603 (15%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y S RR+TR V VG++ IG +PIR+Q+M T DT+D +V +++ + G ++
Sbjct: 4 RYNYSPFSYQRRRTREVKVGDIGIGGNNPIRIQSMITADTRDTENSVRQILELESAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQPDADNLPNIRKELKRLGSKVPLVADIHFTPSVAMKSVEWVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY++EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYKEELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNKYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF +I L + + + SMKASNP VMVQAYRLL + DYPLHLGVT
Sbjct: 183 PQGMVESAIEFIKIAESLSYKDIIVSMKASNPQVMVQAYRLLCSRFMELQMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANL--GMRAAELQ- 371
EAG+G+DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ R LA+ +R E Q
Sbjct: 243 EAGDGKDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPIHEVPVARLLADKYNRLRFPETQS 302
Query: 372 QGVAPFEEKHRHYFDFQR------RSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLK 425
QG + F R+ + +QR + G LP+ E V VL + S SL LK
Sbjct: 303 QGYSEF----RNPYSYQRFYSRPIQVGSLPL-GENHAVRIESVLPFESENAFSQSLSSLK 357
Query: 426 APELLYKSLAAKL-VVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVIT-- 482
+S + +L +V +P D L E S + + MGVI
Sbjct: 358 N---YARSRSLELEMVSVPLPS----DEFLREECISTSKSSS---------VPMGVIVEQ 401
Query: 483 -------------PLSEQLTKPLPH-----------------AMVLVNLQELSTGAYKLL 512
P + P H + +N+Q + K L
Sbjct: 402 NELLLEDVLEDLIPFPKVTVDPFHHFQNRDSLLEFLHKREGKGITELNVQAYQIESLKGL 461
Query: 513 PEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLN 572
PE + G ES + + ILHD R+L LS + +
Sbjct: 462 PEEFKNA----GIES-----VTFSVQTFHILHDY-------------RKLARILS--DFD 497
Query: 573 FPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQG 632
+P+ ++P+ + + + +G +L DG+GD L ++ + + + F++LQ
Sbjct: 498 YPIFLSAEYPD---METALYESSIGIGGMLTDGIGDMLRIKVIDSEPEAVLQLGFDILQA 554
Query: 633 VCL 635
L
Sbjct: 555 TRL 557
>gi|390443501|ref|ZP_10231292.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nitritalea
halalkaliphila LW7]
gi|389666560|gb|EIM78006.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nitritalea
halalkaliphila LW7]
Length = 668
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 163/279 (58%), Positives = 207/279 (74%), Gaps = 2/279 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S + RRKT V VG V IG ++PI +Q+MTT DT D G++E+ +R+ + G +L+
Sbjct: 16 YCTSRTRYSRRKTIPVQVGPVTIGGDNPIVIQSMTTVDTMDTGGSIEQCIRMIESGCELI 75
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +EA+ IK L Q+ Y PLVADIHF P+ A A+ +K+R+NPGN+AD+
Sbjct: 76 RITAPSMKEAENLAAIKEGLRQRGYQTPLVADIHFTPNAAEIAAKIVEKVRINPGNYADK 135
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +FE + YTD+ YQ+EL I E F PLV CK++G A+RIGTNHGSLSDRIMS YGD+P
Sbjct: 136 K-KFELITYTDESYQEELDRIRERFLPLVRICKEHGTAMRIGTNHGSLSDRIMSRYGDTP 194
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVT 314
GMVESA EF RIC + +FH + SMK+SN VMVQAYRLLV ++ G+ YPLHLGVT
Sbjct: 195 LGMVESALEFLRICEEENFHQIVISMKSSNTQVMVQAYRLLVQKLEEGGFQPYPLHLGVT 254
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKE 353
EAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E
Sbjct: 255 EAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFE 293
>gi|374585394|ref|ZP_09658486.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptonema
illini DSM 21528]
gi|373874255|gb|EHQ06249.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptonema
illini DSM 21528]
Length = 665
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 173/327 (52%), Positives = 219/327 (66%), Gaps = 10/327 (3%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
VPR Y +S RR+TR V G + IG +P+R+Q+MTT+DT D V E + + D
Sbjct: 18 FVPRGDYTDSPFLYQRRQTREVKAGAIGIGGANPVRIQSMTTSDTCDTDAVVAEAIALFD 77
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
GA+LVR+T QG +EA I++ L +K Y PLVADIHF+P A+ E +K+R+NP
Sbjct: 78 AGAELVRLTAQGPKEAKNLEVIRSRLNEKGYTGPLVADIHFSPRAAMIAVEYVEKVRINP 137
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GNFAD + +FEQ+EYTDDEY KEL+ I + F PLV + K+ GRA+RIG NHGSLSDRIM+
Sbjct: 138 GNFADTK-RFEQIEYTDDEYVKELERIHDSFKPLVLRAKELGRALRIGVNHGSLSDRIMN 196
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPL 309
YGD+P GMVESA EF +I DF + + SMKASNP VM+QAYR+LV DYPL
Sbjct: 197 RYGDTPEGMVESAIEFLKIAELYDFRDMVVSMKASNPHVMIQAYRMLVERFRKEKMDYPL 256
Query: 310 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE 369
HLGVTEAG+G DGR+KSAIGIG+LL DG+GDTIRVSLTE EI R + +RA
Sbjct: 257 HLGVTEAGDGRDGRIKSAIGIGSLLLDGIGDTIRVSLTEDAVYEIPAAREI----LRATM 312
Query: 370 LQQGVAPFEEKH-----RHYFDFQRRS 391
++Q + K R + QRRS
Sbjct: 313 VEQQNWTIQAKAENESLRSPYRIQRRS 339
>gi|171915869|ref|ZP_02931339.1| GcpE protein [Verrucomicrobium spinosum DSM 4136]
Length = 596
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 162/282 (57%), Positives = 208/282 (73%), Gaps = 3/282 (1%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+YC ++ RR+TR V VG V IG +PIRVQ+M T+DT+D +++ + + G ++
Sbjct: 5 QYCPDLYHYQRRETREVRVGKVGIGGGNPIRVQSMLTSDTRDTEACIQQTLDLVAVGCEI 64
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRIT Q + A+ IK L+ ++PLVADIHF P A+ A+ +K+RVNPGNF D
Sbjct: 65 VRITAQTRPIAENLQNIKAGLLAAGCDVPLVADIHFKPDAAMEAAKWVEKVRVNPGNFVD 124
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F EYTDD+Y +EL IEE F PLVE CK RA+RIGTNHGSLSDRIM+ YGD+
Sbjct: 125 KK-KFAIREYTDDQYAEELGRIEEEFIPLVELCKAKDRAMRIGTNHGSLSDRIMNRYGDT 183
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG--WDYPLHLG 312
P GMVESA EFAR+ R+ D+HNF+FSMKASNP VM++AYRLLVA + G W+YP+HLG
Sbjct: 184 PLGMVESALEFARVARQQDYHNFVFSMKASNPKVMIEAYRLLVARLNDLGGDWNYPIHLG 243
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
VTEAG+GEDGR+KSAIGIG+LL DG+GDT+RVSLTE EI
Sbjct: 244 VTEAGDGEDGRIKSAIGIGSLLADGIGDTVRVSLTEDAVYEI 285
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 7/45 (15%)
Query: 591 VIGAGTNVGALLVDGLGDGLLL---EAPGQDFDFLRDTSFNLLQG 632
++ A TN+G+LL DG+GD +L+ EAPGQ F S+N+LQ
Sbjct: 443 LLSAATNIGSLLCDGIGDAILVQGEEAPGQSFRI----SYNILQA 483
>gi|223940466|ref|ZP_03632317.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [bacterium
Ellin514]
gi|223890869|gb|EEF57379.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [bacterium
Ellin514]
Length = 588
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 174/331 (52%), Positives = 222/331 (67%), Gaps = 23/331 (6%)
Query: 75 KYCESIHKTVRRKTRTVMVGN-----VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
+YC S + RR+TR V VG+ V IG EHP+ +Q+M T DT D +V++ + +
Sbjct: 2 QYCASPYLFQRRQTREVTVGDPARGGVIIGGEHPVVMQSMLTCDTMDTKASVQQTLELVA 61
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
G +VRIT ++A I L + +P+VADIHF P A+ A+ +K+R+NP
Sbjct: 62 VGCQIVRITAPTVKDAANLQNIVKELRDQGCFVPIVADIHFKPDAAMEAAKWVEKVRINP 121
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GN+AD + +F EYT+++Y+ ELQ IEE F+PLV+ CK GRA+RIGTNHGSLSDRIM+
Sbjct: 122 GNYADSK-KFAIKEYTNEQYEAELQRIEERFTPLVKLCKDLGRAMRIGTNHGSLSDRIMN 180
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG--WDY 307
+GDSP GMVESA EFARI RK D+HNF+FSMK+SNP VM++ YRLLVA + G W+Y
Sbjct: 181 RFGDSPLGMVESALEFARIARKNDYHNFVFSMKSSNPKVMIECYRLLVARLNELGPDWNY 240
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCR-------RL 360
P+HLGVTEAGEGEDGR+KSAIGIG+LL DGLGDTIRVSLTE EI CR L
Sbjct: 241 PIHLGVTEAGEGEDGRIKSAIGIGSLLCDGLGDTIRVSLTEDSPNEIAVCRDLLAQIPSL 300
Query: 361 ANLGMRAAELQQGVAPFEEKHRHYFDFQRRS 391
+N AE++ PF FQRRS
Sbjct: 301 SNRNATVAEIKPSYDPFT--------FQRRS 323
>gi|311746091|ref|ZP_07719876.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Algoriphagus
sp. PR1]
gi|126576309|gb|EAZ80587.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Algoriphagus
sp. PR1]
Length = 661
Score = 331 bits (848), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 175/328 (53%), Positives = 228/328 (69%), Gaps = 9/328 (2%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q YC+S+ RRKT V VG V IG ++PI VQ+MTT DT D G+VE+ +R+ + G +
Sbjct: 10 QLYCDSLTSYARRKTIPVNVGGVLIGGDNPIVVQSMTTVDTMDTLGSVEQCIRMIESGCE 69
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
LVRIT +EA+ IK+ L ++ Y PLVADIHF P+ A A +K+RVNPGN+A
Sbjct: 70 LVRITAPSIKEAENLRNIKDELRKRGYKTPLVADIHFTPNAAEVAARIVEKVRVNPGNYA 129
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +FE +EYTD YQ+EL I + F PLV+ CK++G A+RIGTNHGSLSDRIMS YGD
Sbjct: 130 DKK-KFEVIEYTDATYQEELNRIRDRFLPLVKICKEHGTAMRIGTNHGSLSDRIMSRYGD 188
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLG 312
+P GMVESA EF RIC ++ + + SMK+SN VMVQAYRLLV ++ G+ YPLHLG
Sbjct: 189 TPLGMVESALEFLRICEDENYFDIVISMKSSNTQVMVQAYRLLVQKLNEGGFKPYPLHLG 248
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRA--AE 369
VTEAGE EDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L + RA A+
Sbjct: 249 VTEAGEAEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAKALIDRYSHRAPHAK 308
Query: 370 LQQ----GVAPFEEKHRHYFDFQRRSGQ 393
+++ + PF+ + RH + GQ
Sbjct: 309 IKEIDTYPIHPFDHEKRHSNEIYNFGGQ 336
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL 612
A RR L E ++ PVI I +P+ ++D ++ A T+VG LL+DGLGDG+ +
Sbjct: 469 AMRRAIVSLMEAKMDVPVIVKIAYPDQ-NQDLTMLYAATDVGGLLIDGLGDGIFI 522
>gi|294056523|ref|YP_003550181.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Coraliomargarita akajimensis DSM 45221]
gi|293615856|gb|ADE56011.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Coraliomargarita akajimensis DSM 45221]
Length = 681
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 165/316 (52%), Positives = 217/316 (68%), Gaps = 1/316 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S + RR +R + VG V +G +PIR+Q+MTT DT+DV TV + + +A+ G ++V
Sbjct: 11 YCASRFQAQRRLSREINVGGVRVGGNNPIRIQSMTTTDTQDVDATVAQTLALAEAGCEIV 70
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT K+ A+A EI + ++PLVADIHF P+ A+ A+ +K+R+NPGN+AD+
Sbjct: 71 RITAPNKKAAEALGEISKKVRAAKCDVPLVADIHFLPAAAMEAAKHVEKVRINPGNYADK 130
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F EY+D +Y +EL+ + E FSP+V +CK+ GRA+RIGTNHGSLSDRIM+ YGDSP
Sbjct: 131 K-KFAVKEYSDADYDEELERLHEAFSPIVLRCKELGRAMRIGTNHGSLSDRIMNRYGDSP 189
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA EF RI + + SMKASNP VM++AYRL VA M G +YPLHLGVTE
Sbjct: 190 LGMVESALEFIRIAESHRYQDICLSMKASNPKVMIEAYRLAVARMNQEGMNYPLHLGVTE 249
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVA 375
AG+GED R+KSAIGIGTLL DGLGDTIRVSLTE P E+ R LA+ M + +
Sbjct: 250 AGDGEDARVKSAIGIGTLLNDGLGDTIRVSLTEDPIYEVPVARDLADKAMTLWKQESSPQ 309
Query: 376 PFEEKHRHYFDFQRRS 391
FDF+RR+
Sbjct: 310 GPIRDAIDPFDFRRRA 325
>gi|390943405|ref|YP_006407166.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Belliella
baltica DSM 15883]
gi|390416833|gb|AFL84411.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Belliella
baltica DSM 15883]
Length = 659
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 173/335 (51%), Positives = 230/335 (68%), Gaps = 10/335 (2%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L+ + KYC S+ RRKT V VG+V IG E+PI +Q+MTT DT D G+VE+ +R+ +
Sbjct: 6 LIDKIKYCNSLTSYSRRKTIPVKVGDVTIGGENPIVIQSMTTVDTMDTQGSVEQCIRMIE 65
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189
G L+RIT +EA+ IK+ L ++ Y PLVADIHF P+ A A+ +K+R+NP
Sbjct: 66 SGCQLIRITAPSMKEAENLQIIKDELRKRGYTTPLVADIHFTPNAAEIAAKIVEKVRINP 125
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
GN+AD++ +FE ++Y+D+ YQ EL I+E F PLV+ CK+ G A+RIGTNHGSLSDRIMS
Sbjct: 126 GNYADKK-KFEVIDYSDESYQDELDRIKERFLPLVKICKENGTAMRIGTNHGSLSDRIMS 184
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YP 308
YGD+P GMVESA EF RIC +++N + SMK+SN VMVQAYR+LV ++ G+ YP
Sbjct: 185 RYGDTPLGMVESALEFLRICEDEEYYNIVISMKSSNTQVMVQAYRMLVQKLDEGGFKPYP 244
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANL----- 363
LHLGVTEAG+GEDGR+KSA+GIGTLL+DGLGDT+RVSLTE PE E + L +
Sbjct: 245 LHLGVTEAGDGEDGRIKSAVGIGTLLEDGLGDTVRVSLTEDPEFEAPVAQFLVDRYQGRE 304
Query: 364 GMRAAELQQG--VAPFEEKHRHYFD-FQRRSGQLP 395
G A + + + PFE R + F G +P
Sbjct: 305 GHSAIQEIKNYPITPFEYNKRQTIEVFNFGGGNVP 339
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
A RR F + +N ++ PV+ +++ +D ++ A T+VG LL+DGLGDG+LL+
Sbjct: 469 ALRRAFVKMIDNEIHLPVVIKVKYSQQT-QDKTMLHAATDVGGLLIDGLGDGVLLD 523
>gi|404487049|ref|ZP_11022236.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Barnesiella
intestinihominis YIT 11860]
gi|404335545|gb|EJZ62014.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Barnesiella
intestinihominis YIT 11860]
Length = 603
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/278 (56%), Positives = 196/278 (70%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +GN +G E+P+R+Q+MT T D A +V++ +RI GAD VR+T QG RE
Sbjct: 8 RRKSSIVQIGNTPLGGEYPVRIQSMTNTSTLDTAASVDQCIRIIQAGADYVRLTAQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ EIK L+ + Y PLVADIHF P A A DK+R+NPGNF D F+QL Y
Sbjct: 68 AENLGEIKRELIARGYTTPLVADIHFNPKAADAAAYTVDKVRINPGNFVDSARTFKQLSY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ ++E F P + CK+ A+R+G NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYTAELQKLKERFIPFLNICKEQHTAIRLGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR +F N + S+KASN VVMV+ RLL+ M G +YPLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICRSENFDNVVISIKASNTVVMVRTVRLLIETMESEGMNYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIGTLL DG+GDTIRVSL+E PE EI +L N
Sbjct: 248 KSAVGIGTLLADGIGDTIRVSLSEAPEAEIPVACKLVN 285
>gi|417779128|ref|ZP_12426920.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira weilii str. 2006001853]
gi|410780463|gb|EKR65050.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira weilii str. 2006001853]
Length = 663
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 222/577 (38%), Positives = 324/577 (56%), Gaps = 58/577 (10%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V VG+V IG ++PI +Q+M +DT D V++++ + G ++VR+TV + +
Sbjct: 14 RRHTREVKVGDVKIGGDNPIVIQSMINSDTTDTKEAVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYNEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSAIGIG+LL+DGLGDTIRVSLTE P EI + LA+ R + + E R+
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVAKLLADKFNRRIAKRDPATDYSE-FRNP 311
Query: 385 FDFQR-RSGQLPI----QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLV 439
F ++R S + I E V VL + S + L + KSL+ +
Sbjct: 312 FTYERFYSSAIKIGTFEAGESHPVRVETVLPFENS---NSFLANIAGLYQYGKSLSIE-- 366
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL---PHAM 496
+ VDS +L + + A L++ V I + L+E+L L P +
Sbjct: 367 -----PESIIVDSPSPHQLKEISEAAAALSIP--VGILLEKNVSLNEKLQNELRRFPKVV 419
Query: 497 ------------VLVNLQEL-STGAYKLLPEGTRLVVSLRG-DESYEEL---EILKDIDA 539
+L L+E + G Y + + SL+G E+ E+ +L I++
Sbjct: 420 FDPFLQFQDGEKMLSFLKERENAGLYTEIHTSGARIESLKGLPETLSEIGIKNVLFSIES 479
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
IL+D R+L LS + FP++ H FPN ++ + + +G
Sbjct: 480 KEILYDY-------------RKLGSILS--HYEFPILLHGSFPN---PEEALYDSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
LL+DG+GD + ++ P +D + + S++LLQG L
Sbjct: 522 GLLIDGIGDLIRIKTPKIKDIEEIFQLSYDLLQGTRL 558
>gi|421100425|ref|ZP_15561048.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira borgpetersenii str. 200901122]
gi|410796228|gb|EKR98364.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira borgpetersenii str. 200901122]
Length = 663
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 224/577 (38%), Positives = 322/577 (55%), Gaps = 58/577 (10%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG ++PI +Q+M +DT D V++++ + G ++VR+TV + +
Sbjct: 14 RRQTREVKVGDVKIGGDNPIVIQSMINSDTTDTKEAVKQILELERAGCEIVRLTVPSQVD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKVGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G A+RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYNEELERISATFSPLVLRCKELGVAMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSAIGIG+LL+DGLGDTIRVSLTE P EI R LA N + E G + F
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLADKFNRKIAKPESAIGYSEFRNPF 312
Query: 382 RHYFDFQRRSGQLPIQKEGEE--VDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLV 439
Y F R+ ++ + GE V VL + S S L + KSL+ +
Sbjct: 313 -TYEKFYSRAIKIGTFEAGENHPVRVETVLPFENS---SSFLANIAGLYQYGKSLSIE-- 366
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL---PHAM 496
+ +DS +L + + A L++ V I + L+E+L L P +
Sbjct: 367 -----PESILIDSPSPNQLKEISEAAAALSIP--VGILLEKNVSLNEKLQNELRRFPKVV 419
Query: 497 ------------VLVNLQE-LSTGAYKLLPEGTRLVVSLRG-DESYEEL---EILKDIDA 539
+L L+E + G Y + + SL+G E+ E+ +L I++
Sbjct: 420 FDPFLQFQDGEKMLSFLKERQNAGLYTEIHTSGAKIESLKGLPETLSEIGIKNVLFSIES 479
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
IL+D R+L LS FP++ H F N ++ + + +G
Sbjct: 480 KEILYDY-------------RKLGSILSR--YEFPILLHGSFSN---PEEALYDSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
LL+DG+GD + ++ P +D + S++LLQG L
Sbjct: 522 GLLIDGIGDLIRIKTPKIKDIKEIFQLSYDLLQGTRL 558
>gi|456863573|gb|EMF82040.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira weilii serovar Topaz str. LT2116]
Length = 663
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 221/577 (38%), Positives = 324/577 (56%), Gaps = 58/577 (10%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V VG+V IG ++PI +Q+M +DT D V++++ + G ++VR+TV + +
Sbjct: 14 RRHTREVKVGDVKIGGDNPIVIQSMINSDTTDTKEAVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYNEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSAIGIG+LL+DGLGDTIRVSLTE P EI + LA+ R + E R+
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVAKLLADKFNRRIAKPDPATDYSE-FRNP 311
Query: 385 FDFQR-RSGQLPI----QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLV 439
F ++R S + I E V VL + S ++ +L KSL+ +
Sbjct: 312 FTYERFYSSAIKIGTFEAGESHPVRVETVLPFENSNSFLANIAELYQ---YGKSLSIE-- 366
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL---PHAM 496
+ +DS +L + + A L++ V I + L+E+L L P +
Sbjct: 367 -----PESILIDSPSPHQLKEISEAAAALSIP--VGILLEKNVSLNEKLQNELRRFPKVV 419
Query: 497 ------------VLVNLQE-LSTGAYKLLPEGTRLVVSLRG-DESYEEL---EILKDIDA 539
+L L+E + G Y + + SL+G E+ E+ +L I++
Sbjct: 420 FDPFLQFQDGEKMLSFLKERQNAGLYTEIHTSGARIESLKGLPETLSEIGIKNVLFSIES 479
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
IL+D R+L LS + FP++ H FPN ++ + + +G
Sbjct: 480 KEILYDY-------------RKLGSILS--HYEFPILLHGSFPN---PEEALYDSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
LL+DG+GD + ++ P +D + + S++LLQG L
Sbjct: 522 GLLIDGIGDLIRIKTPKIKDIEEIFQLSYDLLQGTRL 558
>gi|398337530|ref|ZP_10522235.1| deoxyxylulose biosynthesis protein [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 667
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 220/567 (38%), Positives = 319/567 (56%), Gaps = 38/567 (6%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V +G ++PI +Q+M +DT D G+V++++ + G ++VR+TV + +
Sbjct: 14 RRKTREVKVGDVKVGGDNPIVIQSMINSDTTDTQGSVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPAIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY EL I EVFSPLV +CK+ G A+RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYDDELGRISEVFSPLVLRCKELGVAMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F I L +++ + SMKASNP VMVQAYR+L A +YPLHLGVTEAG+G+DGR+
Sbjct: 193 FIAIAESLGYYDIIVSMKASNPQVMVQAYRMLAARFGELKMNYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA N E +G + F
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLADKFNSRRTDTEKAKGYSEF---- 308
Query: 382 RHYFDFQR-RSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVV 440
R+ F ++R S ++ I G S V ++ + E LA +
Sbjct: 309 RNPFSYERFYSSEIKI----------GNFEAGDS--HPVRVETILPFENTNSFLANVARL 356
Query: 441 GMPFKDLATVDSILLRELPSVDD----HDARLALKRLVDISMGVITPLSEQLTKPLPH-- 494
K L+ +L + P D +A AL V + + L+E+L K L
Sbjct: 357 YQYGKTLSIEPESILVDSPQPDQLEEISEAANALSIPVGLFLAKNVSLNEKLQKELKRFP 416
Query: 495 AMVLVNLQELSTGAYKLLPEGTRLVVSLRGD--ESYEELEILKDIDATMI---LHDLPFN 549
+V + G L R L + S +++E LK + T+ + ++ F+
Sbjct: 417 KVVFDPFLQFQDGEKMLAYLKERQNAGLYSEIHTSGDKIESLKGLPETLAESGIKNVLFS 476
Query: 550 EDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDG 609
D + R+L LS FP++ H F N +++ + + +G LL+DG+GD
Sbjct: 477 LDTKEILYDYRKLGNILS--RYEFPILLHGSFQN---QEEALYDSAIGIGGLLIDGIGDL 531
Query: 610 LLLEAPG-QDFDFLRDTSFNLLQGVCL 635
+ ++ P +D + S++LLQG L
Sbjct: 532 IRIQTPSLEDIEETFQLSYDLLQGTRL 558
>gi|288928856|ref|ZP_06422702.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 317 str. F0108]
gi|288329840|gb|EFC68425.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 317 str. F0108]
Length = 650
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 211/560 (37%), Positives = 303/560 (54%), Gaps = 52/560 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR VG+V +G +P+RVQ+MTT DT D + + RI G +LVR+T QGKRE
Sbjct: 33 RRNASVTTVGSVTMGGNNPVRVQSMTTTDTNDTEASAAQAERIIQAGGELVRLTTQGKRE 92
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L QK Y+ PLVAD+HF +VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 93 AENLRNINAALRQKGYDTPLVADVHFNANVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 152
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I+ F P + C++ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 153 TDEEYAEEIKKIDARFVPFLNICRENNTAVRIGVNHGSLSDRIMSRYGDTPAGIVESCME 212
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ F N + S+KASN VVMVQ+ RLLV +M + +YPLHLGVTEAGEGEDGR+
Sbjct: 213 FLRICKREQFSNVVISIKASNTVVMVQSVRLLVQQMRLEDMNYPLHLGVTEAGEGEDGRI 272
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIGTLL DG+GDTIRVSL+E PE EI R L +
Sbjct: 273 KSAVGIGTLLSDGIGDTIRVSLSEDPEAEIPVARALVDY--------------------- 311
Query: 385 FDFQRRSGQLPIQKEGEE-VDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMP 443
+ RS LPI + + +Y R + + ++ + L ++ + K V +
Sbjct: 312 --IEARSDHLPIPAQAAKGFNYTAPERRPTTPVANIGGENLP---VVISNRTDKDKVHVV 366
Query: 444 FKDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLS-EQLTKPLPH-AMVLVN 500
T D I + R LP+ R + + + P + EQ+ PH A+ ++
Sbjct: 367 ANADQTPDYIYIGRHLPANLSAKRRYIMDYDAYMQVASTNPQAYEQVYPIFPHNAVPFIS 426
Query: 501 LQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAAR 560
L E + +V G S E L LK +++ + +++K+G R
Sbjct: 427 LVEAD----------VKFLVLQYGANSDEYLACLKHHPEVVVVC-MSTHKNKVGD---QR 472
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGI-HRDDLVIGAGTNVGALLVDGLGDGLLL----EAP 615
L L +N PV+ + + ++ + A ++G L++DGL DG+ L + P
Sbjct: 473 ALVHELWSAGINNPVVFAQMYRHAAEEKETFQLKAAADMGPLMIDGLTDGIWLMNDGDLP 532
Query: 616 GQDFDFLRDTSFNLLQGVCL 635
+D D T+F +LQ L
Sbjct: 533 DEDVDA---TAFGILQAARL 549
>gi|398331366|ref|ZP_10516071.1| deoxyxylulose biosynthesis protein [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 663
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 213/569 (37%), Positives = 327/569 (57%), Gaps = 42/569 (7%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG ++PI +Q+M +DT D V++++ + G ++VR+TV + +
Sbjct: 14 RRQTREVKVGDVKIGGDNPIVIQSMINSDTTDTKEAVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYNEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L++++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLNYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSAIGIG+LL+DGLGDTIRVSLTE P EI R LA+ R A+ + + E R+
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVARLLADKFNRRIAKPESAIGYSE--FRN 310
Query: 384 YFDFQR---RSGQLPIQKEGEE--VDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKL 438
F ++R R+ ++ + GE V VL + S + L + KSL+ +
Sbjct: 311 PFTYERFYSRAIKIGTFEAGENHPVRVETVLPFENS---NSFLANIAGLYQYGKSLSIE- 366
Query: 439 VVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVL 498
+ +DS +L + + A L+ I +G++ + L + L + L
Sbjct: 367 ------PESILIDSPSPHQLKEISEAAAALS------IPVGILLEKNVSLNEKLQNE--L 412
Query: 499 VNLQELSTGAYKLLPEGTRLVVSLRGDESYE-ELEILKDIDATMILHDLPFNEDKIG--- 554
++ + +G +++ L+ ++ E EI + L LP +IG
Sbjct: 413 RRFPKVVFDPFLQFQDGEKMLSFLKERQNAELYTEIHTNGARIESLKGLPETLSEIGIKN 472
Query: 555 ---RVQAARRLFEYLSENNL----NFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLG 607
+++ L++Y ++ FP++ H F N ++ + + +G LL+DG+G
Sbjct: 473 VLFSIESKEILYDYRKLGSILSHYEFPILLHGSFSN---PEEALYDSAIGIGGLLIDGIG 529
Query: 608 DGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
D + ++ P +D + + S++LLQG L
Sbjct: 530 DLIRIKTPKIKDIEEIFQLSYDLLQGTRL 558
>gi|440537470|emb|CCP62984.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L1/1322/p2]
gi|440538360|emb|CCP63874.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L1/115]
gi|440539249|emb|CCP64763.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L1/224]
gi|440541029|emb|CCP66543.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L3/404/LN]
Length = 602
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 198/279 (70%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+T
Sbjct: 5 CIQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVT 64
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
VQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R
Sbjct: 65 VQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNM 124
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
F Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GM
Sbjct: 125 FTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGM 184
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG
Sbjct: 185 VYSALEYAEVCVAMDYHDIIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGS 244
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 245 GTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
>gi|255348420|ref|ZP_05380427.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis 70]
gi|255502962|ref|ZP_05381352.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis 70s]
gi|385241418|ref|YP_005809258.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/11023]
gi|385245028|ref|YP_005813851.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/150]
gi|386262414|ref|YP_005815693.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis Sweden2]
gi|389857755|ref|YP_006359997.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis F/SW4]
gi|389858628|ref|YP_006360869.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis E/SW3]
gi|289525102|emb|CBJ14573.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis Sweden2]
gi|296434644|gb|ADH16822.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/150]
gi|296438361|gb|ADH20514.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/11023]
gi|380249702|emb|CCE13222.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis F/SW4]
gi|380250577|emb|CCE12333.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis E/SW3]
gi|440529431|emb|CCP54915.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/SotonE4]
gi|440530324|emb|CCP55808.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/SotonE8]
gi|440534793|emb|CCP60303.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis E/Bour]
Length = 602
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 198/279 (70%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+T
Sbjct: 5 CIQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVT 64
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
VQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R
Sbjct: 65 VQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNM 124
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
F Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GM
Sbjct: 125 FTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGM 184
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG
Sbjct: 185 VYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGS 244
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 245 GTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
>gi|15604776|ref|NP_219560.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis D/UW-3/CX]
gi|8928135|sp|O84060.1|ISPG_CHLTR RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|3328450|gb|AAC67648.1| hypothetical protein CT_057 [Chlamydia trachomatis D/UW-3/CX]
gi|440527648|emb|CCP53132.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis D/SotonD5]
gi|440532112|emb|CCP57622.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/SotonG1]
Length = 602
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 198/279 (70%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+T
Sbjct: 5 CIQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVT 64
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
VQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R
Sbjct: 65 VQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNM 124
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
F Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GM
Sbjct: 125 FTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGM 184
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG
Sbjct: 185 VYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGS 244
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 245 GTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
>gi|76788770|ref|YP_327856.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis A/HAR-13]
gi|237802492|ref|YP_002887686.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis B/Jali20/OT]
gi|237804407|ref|YP_002888561.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis B/TZ1A828/OT]
gi|376282067|ref|YP_005155893.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis A2497]
gi|123607202|sp|Q3KMW4.1|ISPG_CHLTA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|76167300|gb|AAX50308.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis A/HAR-13]
gi|231272707|emb|CAX09610.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis B/TZ1A828/OT]
gi|231273726|emb|CAX10504.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis B/Jali20/OT]
gi|371908097|emb|CAX08716.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis A2497]
gi|438689975|emb|CCP49232.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis A/7249]
gi|438691059|emb|CCP48333.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis A/5291]
gi|438692431|emb|CCP47433.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis A/363]
Length = 602
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 198/279 (70%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+T
Sbjct: 5 CIQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVT 64
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
VQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R
Sbjct: 65 VQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNM 124
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
F Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GM
Sbjct: 125 FTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGM 184
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG
Sbjct: 185 VYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGS 244
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 245 GTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
>gi|166155153|ref|YP_001653408.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|226741008|sp|B0BB44.1|ISPG_CHLTB RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|165931141|emb|CAP06706.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|440525864|emb|CCP51348.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/8200/07]
gi|440535688|emb|CCP61201.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/795]
gi|440541917|emb|CCP67431.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/UCH-2]
gi|440542807|emb|CCP68321.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Canada2]
gi|440543699|emb|CCP69213.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/LST]
gi|440544589|emb|CCP70103.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Ams1]
gi|440545479|emb|CCP70993.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/CV204]
gi|440913741|emb|CCP90158.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Ams2]
gi|440914631|emb|CCP91048.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Ams3]
gi|440915521|emb|CCP91938.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Canada1]
gi|440916416|emb|CCP92833.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Ams4]
gi|440917306|emb|CCP93723.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2b/Ams5]
Length = 602
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 198/279 (70%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+T
Sbjct: 5 CIQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVT 64
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
VQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R
Sbjct: 65 VQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNM 124
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
F Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GM
Sbjct: 125 FTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGM 184
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG
Sbjct: 185 VYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGS 244
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 245 GTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
>gi|255506631|ref|ZP_05382270.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis D(s)2923]
gi|389859506|ref|YP_006361746.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis F/SW5]
gi|380248826|emb|CCE14111.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis F/SW5]
gi|440531221|emb|CCP56731.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis F/SotonF3]
Length = 602
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 198/279 (70%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+T
Sbjct: 5 CIQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVT 64
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
VQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R
Sbjct: 65 VQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNM 124
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
F Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GM
Sbjct: 125 FTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGM 184
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG
Sbjct: 185 VYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGS 244
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 245 GTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
>gi|440526755|emb|CCP52239.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis D/SotonD1]
Length = 602
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 198/279 (70%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+T
Sbjct: 5 CIQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVT 64
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
VQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R
Sbjct: 65 VQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNM 124
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
F Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GM
Sbjct: 125 FTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGM 184
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG
Sbjct: 185 VYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGS 244
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 245 GTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPISEIPIC 283
>gi|359727531|ref|ZP_09266227.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
weilii str. 2006001855]
Length = 663
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 221/577 (38%), Positives = 323/577 (55%), Gaps = 58/577 (10%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V VG+V IG ++PI +Q+M +DT D V++++ + G ++VR+TV + +
Sbjct: 14 RRHTREVKVGDVKIGGDNPIVIQSMINSDTTDTKEAVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY +EL+ I FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSEYNEELERISATFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVTEAG+G+DGR+
Sbjct: 193 FIRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSAIGIG+LL+DGLGDTIRVSLTE P EI + LA+ R + E R+
Sbjct: 253 KSAIGIGSLLEDGLGDTIRVSLTEDPVLEIPVAKLLADKFNRRIAKPDPATDYSE-FRNP 311
Query: 385 FDFQR-RSGQLPI----QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLV 439
F ++R S + I E V VL + S + L + KSL+ +
Sbjct: 312 FTYERFYSSAIKIGTFEAGESHPVRVETVLPFENS---NSFLANIAGLYQYGKSLSIE-- 366
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL---PHAM 496
+ +DS +L + + A L++ V I + L+E+L L P +
Sbjct: 367 -----PESILIDSPSPHQLKEISEAAAALSIP--VGILLEKNVSLNEKLQNELRRFPKVV 419
Query: 497 ------------VLVNLQEL-STGAYKLLPEGTRLVVSLRG-DESYEEL---EILKDIDA 539
+L L+E + G Y + + SL+G E+ E+ +L I++
Sbjct: 420 FDPFLQFQDGEKMLSFLKERENAGLYTEIHTSGARIESLKGLPETLSEIGIKNVLFSIES 479
Query: 540 TMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVG 599
IL+D R+L LS + FP++ H FPN ++ + + +G
Sbjct: 480 KEILYDY-------------RKLGSILS--HYEFPILLHGSFPN---PEEALYDSAIGIG 521
Query: 600 ALLVDGLGDGLLLEAPG-QDFDFLRDTSFNLLQGVCL 635
LL+DG+GD + ++ P +D + + S++LLQG L
Sbjct: 522 GLLIDGIGDLIRIKTPKIKDIEEIFQLSYDLLQGTRL 558
>gi|385269706|ref|YP_005812866.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis A2497]
gi|347974846|gb|AEP34867.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis A2497]
Length = 609
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 198/279 (70%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+T
Sbjct: 12 CIQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVT 71
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
VQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R
Sbjct: 72 VQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNM 131
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
F Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GM
Sbjct: 132 FTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGM 191
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG
Sbjct: 192 VYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGS 251
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 252 GTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 290
>gi|385243264|ref|YP_005811110.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis D-EC]
gi|385244144|ref|YP_005811988.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis D-LC]
gi|297748187|gb|ADI50733.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis D-EC]
gi|297749067|gb|ADI51745.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis D-LC]
Length = 609
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 198/279 (70%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+T
Sbjct: 12 CIQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVT 71
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
VQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R
Sbjct: 72 VQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNM 131
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
F Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GM
Sbjct: 132 FTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGM 191
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG
Sbjct: 192 VYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGS 251
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 252 GTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 290
>gi|255310859|ref|ZP_05353429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis 6276]
gi|255317159|ref|ZP_05358405.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis 6276s]
gi|385239569|ref|YP_005807411.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/9768]
gi|385240490|ref|YP_005808331.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/11222]
gi|385242345|ref|YP_005810184.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/9301]
gi|385245955|ref|YP_005814777.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/11074]
gi|296435574|gb|ADH17748.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/9768]
gi|296436498|gb|ADH18668.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/11222]
gi|296437434|gb|ADH19595.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/11074]
gi|297139933|gb|ADH96691.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis G/9301]
gi|440524972|emb|CCP50223.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis K/SotonK1]
gi|440528539|emb|CCP54023.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis D/SotonD6]
gi|440533004|emb|CCP58514.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis Ia/SotonIa1]
gi|440533898|emb|CCP59408.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis Ia/SotonIa3]
Length = 602
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 198/279 (70%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+T
Sbjct: 5 CIQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQEWGCDIVRVT 64
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
VQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R
Sbjct: 65 VQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNM 124
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
F Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GM
Sbjct: 125 FTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGM 184
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG
Sbjct: 185 VYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGS 244
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 245 GTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
>gi|225159172|ref|ZP_03725476.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Diplosphaera
colitermitum TAV2]
gi|224802224|gb|EEG20492.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Diplosphaera
colitermitum TAV2]
Length = 375
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 166/287 (57%), Positives = 207/287 (72%), Gaps = 2/287 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S + TVRR T VG V IG ++P+RVQ+MTT +T+DV TV++ + +A+ G ++V
Sbjct: 3 YCSSRYATVRRFTTEAKVGAVGIGHQNPVRVQSMTTTNTQDVEATVKQSIALAEVGCEIV 62
Query: 136 RITVQGKREADACFEIKNSLVQKNY-NIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
R+T A A +I+ L + +IPLVADIHF PS A+ E +KIRVNPGN+AD
Sbjct: 63 RVTAPNHAAARALKDIRKKLTAAGFGHIPLVADIHFLPSAAMEAVEHVEKIRVNPGNYAD 122
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F EY+D EY +ELQ I E F+PLV + K GR++RIGTNHGSLSDRIM+ YGD+
Sbjct: 123 KK-KFAVNEYSDAEYDRELQRIYEAFTPLVLRAKALGRSLRIGTNHGSLSDRIMNRYGDT 181
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RIC +F N + SMKASNP VM+QAYRLLVA M YPLHLGVT
Sbjct: 182 PLGMVESALEFLRICESHNFKNIVLSMKASNPKVMIQAYRLLVARMDQENMHYPLHLGVT 241
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
EAG+GEDGR+KSAIGIG+LL DGLGDTIRVSLTE EI ++LA
Sbjct: 242 EAGDGEDGRIKSAIGIGSLLHDGLGDTIRVSLTEDSVYEIPVAQKLA 288
>gi|440536578|emb|CCP62092.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L1/440/LN]
Length = 602
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 198/279 (70%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+T
Sbjct: 5 CIQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQELGCDIVRVT 64
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
VQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R
Sbjct: 65 VQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNM 124
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
F Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GM
Sbjct: 125 FTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGM 184
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG
Sbjct: 185 VYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGS 244
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 245 GTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
>gi|166154278|ref|YP_001654396.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis 434/Bu]
gi|301335529|ref|ZP_07223773.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2tet1]
gi|226741007|sp|B0B9G5.1|ISPG_CHLT2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|165930266|emb|CAP03752.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlamydia
trachomatis 434/Bu]
gi|440540139|emb|CCP65653.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2/25667R]
Length = 602
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 198/279 (70%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
I RRKT V +G++ +GSEH I++Q+MTT T DV GTV ++ + + G D+VR+T
Sbjct: 5 CIQNAFRRKTLPVRIGDLFVGSEHSIKIQSMTTTATTDVDGTVRQICALQELGCDIVRVT 64
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
VQG RE AC IK+ L+Q+N +IPLVADIHF P A+ V +C DK+R+NPGN+ D+R
Sbjct: 65 VQGLREVHACEHIKDRLIQQNISIPLVADIHFFPQAAIHVVDCVDKVRINPGNYVDKRNM 124
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
F Y+D++Y L+H+ FSPLVEKCK+ G+A+RIG NHGSLS+R+ YG++ GM
Sbjct: 125 FTGKIYSDEQYAHSLEHLMNKFSPLVEKCKRLGKAMRIGVNHGSLSERVTQRYGNTIEGM 184
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA E+A +C +D+H+ +FSMK+SNP VMV AYR L E+ W YPLHLGVTEAG
Sbjct: 185 VYSALEYAEVCVAMDYHDVIFSMKSSNPKVMVAAYRSLAYELDQREWSYPLHLGVTEAGS 244
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
G G +KSA+GIGTLL +GLGDTIR SLT P EI C
Sbjct: 245 GTAGIVKSAVGIGTLLSEGLGDTIRCSLTGSPINEIPIC 283
>gi|183220675|ref|YP_001838671.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
gi|189910776|ref|YP_001962331.1| deoxyxylulose biosynthesis protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167775452|gb|ABZ93753.1| Deoxyxylulose biosynthesis protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167779097|gb|ABZ97395.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 675
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 160/286 (55%), Positives = 213/286 (74%), Gaps = 1/286 (0%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
KY ES RR TR V VG+V IG ++PIRVQ+M T++T+D +++++M + G+++
Sbjct: 4 KYNESPFFYRRRPTREVKVGDVGIGGKNPIRVQSMITSNTRDTDASIQQIMDLERAGSEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ + + +PLVADIHF P VAL+ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPNIRKKMKELGLKVPLVADIHFTPQVALKCVEWVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +FE +EYTD++Y +EL IEEVF+PLV + K+ G A+RIGTNHGSLSDRIM+ +GD+
Sbjct: 124 KK-KFEIIEYTDNDYHEELARIEEVFTPLVLRAKELGVAMRIGTNHGSLSDRIMNRFGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RI K + + + SMKASNP VM+QAYR+LVA Y G DYPLHLGVT
Sbjct: 183 PLGMVESALEFIRIAEKNSYRDIVVSMKASNPQVMIQAYRMLVARFYDLGMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
EAG+G+DGR+KSAIGIG+LL+DGLGDT+RVSLTE EI + L
Sbjct: 243 EAGDGKDGRIKSAIGIGSLLEDGLGDTVRVSLTEDAIHEIPVAKEL 288
>gi|398344642|ref|ZP_10529345.1| deoxyxylulose biosynthesis protein [Leptospira inadai serovar Lyme
str. 10]
Length = 665
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 215/580 (37%), Positives = 317/580 (54%), Gaps = 45/580 (7%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y S RR+TR V VG++ +G +PIR+Q+M T DT+D +V +++ + + G ++
Sbjct: 4 RYNHSPFSHKRRRTREVKVGDIGVGGNNPIRIQSMITADTRDTENSVRQILELEEAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQPDADNLPNIRKELKRIGSKVPLVADIHFTPSVAMKSVEWVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +Y+D EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYSDLEYTEELERIAEVFSPLVSRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RI + + + + SMKASNP VM+QAYRLL + DYPLHLGVT
Sbjct: 183 PMGMVESAIEFIRIAEAVGYKDIIVSMKASNPQVMIQAYRLLCSRFLELQMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA-NLGMRAAELQQG 373
EAG+G+DGR+KSAIGIG+LL+DGLGDTIRVSLTE P EI R LA + G
Sbjct: 243 EAGDGKDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPIHEIPVARYLAETYNTKLFPEANG 302
Query: 374 VAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKS 433
++ E R+ + +QR + PI+ E+ + + S+ +P
Sbjct: 303 ISYSE--FRNPYTYQRFYSK-PIRVSSVEIG-------ENHPVRIESVFNFSSPGEFSNQ 352
Query: 434 LAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLT---- 489
L+ K+ A S+ + EL SV L + L++IS +TP+ L
Sbjct: 353 LSN-------LKNFAKNRSLEV-ELASVPFPADSLQREELLEISKSSLTPIGVILEQHEL 404
Query: 490 ---------KPLPHAMV-----LVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILK 535
KP P + N+ L+ + L EG L E L L
Sbjct: 405 LFENDLEDLKPFPKITIDPFYHFQNIDALTD--FLKLREGRGLTELSVQSYQIESLNGLP 462
Query: 536 DIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAG 595
++ + + F+ + R+L LS++ ++P++ +F ++ + +
Sbjct: 463 EVFKENGIESIAFSLRTPHILHDYRKLARILSDS--DYPIVLAGEFET---QEAALFESS 517
Query: 596 TNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCL 635
+G LLVDG+GD L + D + + F+LLQ L
Sbjct: 518 IGLGGLLVDGIGDLLRIRIADSDPESVLQLGFDLLQATRL 557
>gi|330444429|ref|YP_004377415.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pecorum E58]
gi|328807539|gb|AEB41712.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pecorum E58]
Length = 600
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 152/280 (54%), Positives = 204/280 (72%), Gaps = 1/280 (0%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRR T +V +G++ +GS+H I++Q+MTT T DVA T+E++ +A+ G ++ R+TVQG +
Sbjct: 4 VRRPTCSVKIGHLYVGSKHSIKIQSMTTTPTADVAATLEQIYSLAECGCEIARVTVQGIK 63
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
EA AC +IK+ L+ + IPLVADIHF P A+ V + DK+R+NPGN+ D+R F +
Sbjct: 64 EAQACEKIKDQLLSRGLRIPLVADIHFFPQAAMHVVDFVDKVRINPGNYVDKRNMFSGTK 123
Query: 204 -YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
YT+ Y + L + + FSPLVEKCKK G+A+RIG NHGSLS+R+M YGD+ GMV SA
Sbjct: 124 TYTETSYAQSLVRLRDKFSPLVEKCKKLGKAMRIGVNHGSLSERVMQRYGDTIEGMVISA 183
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E+ IC +LD+H+ +FSMK+SNP VMV AYR L ++ + GW YPLHLGVTEAG G DG
Sbjct: 184 LEYVAICEELDYHDVVFSMKSSNPKVMVAAYRQLAKDLDLRGWRYPLHLGVTEAGMGMDG 243
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
+KSA+GIGTLL +GLGDTIR SLT P EI C++L N
Sbjct: 244 IIKSAVGIGTLLTEGLGDTIRCSLTGCPTTEIPVCQKLIN 283
>gi|409195659|ref|ZP_11224322.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinilabilia
salmonicolor JCM 21150]
Length = 623
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 289/564 (51%), Gaps = 61/564 (10%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+C+S + R KT V VGNV IG ++P+ +Q+MTT +T D TVE+ ++I++ G +L
Sbjct: 6 NFCDSYFQYNRLKTDPVNVGNVIIGGDNPVIIQSMTTTNTLDTLATVEQGIKISEAGGEL 65
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VRIT QG+REA IK L+++N +PLVAD+HF P+ A A +K+R+NPGNF
Sbjct: 66 VRITTQGRREATNLEFIKKGLMERNCTVPLVADVHFNPAAAEIAATLIEKVRINPGNFTG 125
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
+F+++ ++ Q+ L+ I E P + C+K+G A+RIGTNHGSLSDR+MS +GD+
Sbjct: 126 GAKKFKEVVAGSEKDQEGLRQIREKLVPFLRLCQKHGTAIRIGTNHGSLSDRMMSKFGDT 185
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVES E+ RIC++ DF N + S+K+SN VMV RLLVA M YPLHLGVT
Sbjct: 186 PEGMVESCMEYLRICKEEDFKNIVLSIKSSNTRVMVHTVRLLVAAMKREDMRYPLHLGVT 245
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA-NLGMRAAELQQG 373
EAG GEDGR+KSA+GIG LL DG+GDTIRVSLTEPPE EI L + G RA +
Sbjct: 246 EAGSGEDGRLKSAVGIGALLSDGIGDTIRVSLTEPPENEIPVAAMLVEHYGKRAGHVP-- 303
Query: 374 VAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKS 433
V P E F +Q+RS + GE P +
Sbjct: 304 VPPVETDFYSPFKYQKRSTHQVVNVGGE------------------------MPAAVVVD 339
Query: 434 LAAKLVV--GMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP 491
+ K ++ GM ++ D L LP ++ + S V+ PL E
Sbjct: 340 VRGKPIISEGMETPEIVICDHDQLSGLPESWADVIKVVPAESYEDSSSVVYPLFEVDENW 399
Query: 492 LPHAMVL---VNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPF 548
+ L +L+ G +LL E +V+ L D P
Sbjct: 400 ISQEGALFLECRNSDLTAGMKELLKEKKNVVILLESDH--------------------PN 439
Query: 549 NEDKIGRVQAARRLFEYLSEN-NLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLG 607
N A RR F +N L PVI Q + +D + + + G L +DG G
Sbjct: 440 N-------TADRRAFFLTMQNEGLTHPVIVS-QTYDECTDEDFQLKSAADSGLLFLDGYG 491
Query: 608 DGLLLEAPGQDFDFLRDTSFNLLQ 631
DG+ L Q + T F +LQ
Sbjct: 492 DGIALTGFLQSVPIMVSTGFGILQ 515
>gi|406592276|ref|YP_006739456.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci CP3]
gi|406594551|ref|YP_006741582.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci MN]
gi|410858390|ref|YP_006974330.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Chlamydia
psittaci 01DC12]
gi|405782983|gb|AFS21731.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci MN]
gi|405788148|gb|AFS26891.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci CP3]
gi|410811285|emb|CCO01931.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Chlamydia
psittaci 01DC12]
Length = 606
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 153/279 (54%), Positives = 198/279 (70%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLLALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD +Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKQYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
AFE+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 AFEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA+GIGTLL +GLGDTIR SLT P +E+ C L
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEVPVCESL 287
>gi|260910730|ref|ZP_05917388.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635146|gb|EEX53178.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 659
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 209/562 (37%), Positives = 301/562 (53%), Gaps = 56/562 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR VG+V +G +P+RVQ+MTT DT D + + RI G +LVR+T QGKRE
Sbjct: 34 RRNASVTTVGSVTMGGNNPVRVQSMTTTDTNDTEASAAQAERIIQAGGELVRLTTQGKRE 93
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L QK Y PLVAD+HF +VA A +K+R+NPGN+ D F+QLEY
Sbjct: 94 AENLRNINAALRQKGYATPLVADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKQLEY 153
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I+ F P + C++ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 154 TDEEYAEEIKKIDTRFVPFLNICRENNTAVRIGVNHGSLSDRIMSRYGDTPAGIVESCME 213
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ F+N + S+KASN VVMVQ+ RLLV +M + +YPLHLGVTEAGEGEDGR+
Sbjct: 214 FLRICKREHFNNVVISIKASNTVVMVQSVRLLVQQMRLEDMNYPLHLGVTEAGEGEDGRI 273
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDTIRVSL+E PE EI R L + +G R L P +
Sbjct: 274 KSAVGIGALLADGIGDTIRVSLSEDPEAEIPVARALVDYIGARTPHL-----PIPAAMAN 328
Query: 384 YFDF---QRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVV 440
F++ +RR + GE + +R + V + + P+ +Y
Sbjct: 329 DFNYTAPERRPTKAVANIGGENPPVV-ISNRTDKDKVHVVANADQTPDYIY--------- 378
Query: 441 GMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL-PH-AMVL 498
+ R LP+ R + + + P + +L P+ PH A+
Sbjct: 379 -------------IGRHLPANLSAKRRYIMDYDAYMQLASTNPQAYELVYPIFPHNAVPF 425
Query: 499 VNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA 558
++L E + +V G S E L LK +++ + +++K+G
Sbjct: 426 ISLVEAD----------VKFLVLQYGANSDEYLACLKHHPEVVVVC-MSTHKNKVGD--- 471
Query: 559 ARRLFEYLSENNLNFPVIHHIQFPNGI-HRDDLVIGAGTNVGALLVDGLGDGLLL----E 613
R L L +N PV+ + + ++ + A ++G L++DGL DG L +
Sbjct: 472 QRALVHELWSAGVNNPVVFAQMYRHSAEEKETFQLKAAADMGPLMIDGLTDGFWLMNDGD 531
Query: 614 APGQDFDFLRDTSFNLLQGVCL 635
P ++ D T+F +LQ L
Sbjct: 532 LPDEEVDA---TAFGILQAARL 550
>gi|325281521|ref|YP_004254063.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Odoribacter
splanchnicus DSM 20712]
gi|324313330|gb|ADY33883.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Odoribacter
splanchnicus DSM 20712]
Length = 612
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 209/563 (37%), Positives = 299/563 (53%), Gaps = 67/563 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRKT V +GNV + SE P+ VQ+M T++V VE+ +RI + G LVRIT G +
Sbjct: 1 MRRKTTAVRIGNVVLSSEEPVLVQSMLNTSTREVDACVEQAIRIIEAGGRLVRITAPGVK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
EA+ EI L ++ Y P+ ADIHF A A +K+R+NPGNFAD+RA F++L
Sbjct: 61 EAEMLGEIHRRLRERGYTTPISADIHFVAEAASVAARYVEKVRINPGNFADKRATFKKLT 120
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+EY EL+ + + F+ +E C++YG AVRIGTNHGSLSDRIMS YGD+P GMVE+
Sbjct: 121 YTDEEYAAELEILRQKFTEFLEVCRQYGTAVRIGTNHGSLSDRIMSRYGDTPAGMVEATM 180
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
E+ R+C+ DF + + S+K+S+ MV A RLLV +M G YPLHLGVTEAGEGEDGR
Sbjct: 181 EYLRVCQACDFKDVVISLKSSDCRTMVDAVRLLVEKMEAEGMCYPLHLGVTEAGEGEDGR 240
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRH 383
++SA+GIGTLL +G+GDTIRVSLTE PE EI LA + E +G P + +
Sbjct: 241 IRSAVGIGTLLNEGIGDTIRVSLTEEPEAEIPVACELARI-CSEPEYLKGWTPLKGECSK 299
Query: 384 YFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVS----LDQL----KAPELLYKSLA 435
+G + ++ V++R G + V+ D+L KAPE +Y
Sbjct: 300 PCIVAGLTGVTVLDEQ--------VMNRIGFTVSEVNDPVYGDRLHAGIKAPEWIYTGTL 351
Query: 436 AKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHA 495
+ +P D + + + ++ V + +A +PL
Sbjct: 352 GPELTKLP-PDTGVIVPLEILDMAHVYNRNA---------------SPLC---------- 385
Query: 496 MVLVNLQELSTGAYK----LLPEGTRLVVSLRGDESYEEL--EILKDIDATMILHDLPFN 549
S GAYK + RLV R +E +L + +D A ++L LP
Sbjct: 386 ---------SVGAYKKGEQTIDSKYRLVQICRSEELDADLTGRLRQDGKAVLVLA-LPVE 435
Query: 550 EDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDG 609
+ R +F + E L P I P G ++ + + A + +G +D L G
Sbjct: 436 ------YRLYREIFRRIQEAGLTNPAIIRAVVP-GKEKERIRLVAASQLGGFFLDRLAGG 488
Query: 610 LLLEAPG-QDFDFLRDTSFNLLQ 631
L +E P +D F + S N+LQ
Sbjct: 489 LWIETPEIEDLTFPLELSRNILQ 511
>gi|456967987|gb|EMG09265.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira interrogans serovar Grippotyphosa str.
LT2186]
Length = 298
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/288 (54%), Positives = 210/288 (72%), Gaps = 1/288 (0%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y ++ RRKTR V VG+V +G +PI +Q+M +DT D G+V++++ + G ++
Sbjct: 4 RYNQTPFGYQRRKTREVKVGDVKVGGNNPIVIQSMINSDTTDTQGSVKQILELERAGCEI 63
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
VR+TV + +AD I+ L + +PLVADIHF PSVA++ E +K+R+NPGNFAD
Sbjct: 64 VRLTVPSQADADNLPSIRQELKKAGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
++ +F +YTD EY +EL+ I EVFSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 KK-KFAVRDYTDLEYNQELERISEVFSPLVLRCKELGVSMRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P+GMVESA EF RI L +++ + SMKASNP VMVQAYR+L + DYPLHLGVT
Sbjct: 183 PQGMVESALEFIRIAESLGYYDIIVSMKASNPQVMVQAYRMLASRFNELKMDYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
EAG+G DGR+KSAIGIG+LL+DGLGDTIRVSLTE P E+ + LA+
Sbjct: 243 EAGDGNDGRIKSAIGIGSLLEDGLGDTIRVSLTEDPVLEVPVAKLLAD 290
>gi|315606925|ref|ZP_07881931.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
buccae ATCC 33574]
gi|315251306|gb|EFU31289.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
buccae ATCC 33574]
Length = 628
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 218/570 (38%), Positives = 309/570 (54%), Gaps = 63/570 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + +G + +G E+PIR+Q+MTT DT D VE+ RI G +LVR+T QG +E
Sbjct: 9 RRKSTEIHIGAIDMGGENPIRIQSMTTTDTNDTEACVEQAERIIKAGGELVRLTTQGTKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I SL K Y PLVAD+HF P VA A +K+RVNPGN+ D +F +LEY
Sbjct: 69 AENLKNINASLRAKGYLTPLVADVHFNPKVADVAARYAEKVRVNPGNYVDPARKFIKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ IE+ F P + CK+ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYALELQKIEDRFVPFLNICKENHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ DF + + S+K+SN VVMV++ RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKQQDFKDVVISIKSSNTVVMVRSVRLLVDTMEKEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDTIRVSL+E PE E+ R L + +G +A Q + P E
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPEAEVPVARHLVDYIGRKAG---QTMIPGEAA--P 303
Query: 384 YFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKA-----------PELLYK 432
YFD+ P++++ VD G + V+ S S D+ + P+ LY
Sbjct: 304 YFDWLH-----PVRRKTHAVDIIGG-EQVPVVIASRSADKEQKCAVVVSNADTRPDYLYT 357
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL 492
A +P + L ++ + D DA L S G I L ++
Sbjct: 358 GQA------LPQE--------LQKQQKYIIDFDAYAHLA-----SEGNIENLKGRVFPIF 398
Query: 493 PHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDK 552
P+ Q + + +LP G S E + LK +++ + ++++
Sbjct: 399 PYNATPFISQVQADAKFLVLPFGA---------PSEEYIACLKAHPEVVVVC-MSNHQNR 448
Query: 553 IGRVQAARRLFEYLSENNLNFPVIHHIQFPNG-IHRDDLVIGAGTNVGALLVDGLGDGLL 611
+G R L LS N L PV+ + + + D + A ++GAL++DGL DG+
Sbjct: 449 LGE---QRALVHELSVNGLTNPVVFCQMYRHSEKEKSDFQLEAAADMGALMIDGLTDGIW 505
Query: 612 L----EAPGQDFDFLRDTSFNLLQGVCLMS 637
L + P + D +T+F +LQ L +
Sbjct: 506 LMNDGDIPAETVD---ETAFGILQAARLRT 532
>gi|365121471|ref|ZP_09338391.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Tannerella
sp. 6_1_58FAA_CT1]
gi|363645716|gb|EHL84976.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Tannerella
sp. 6_1_58FAA_CT1]
Length = 616
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 297/545 (54%), Gaps = 69/545 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ +GN +G E+P+R+Q+MT T++ VE+ +RI D GAD VR+T QG +E
Sbjct: 8 RRKSSVTRIGNTPLGGENPVRIQSMTNTRTQETLPCVEQSIRIIDAGADYVRLTAQGTKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I+ L ++ Y+ PL+ADIHF P+VA A +K+R+NPGNF D F LEY
Sbjct: 68 AENLANIEKELHKRGYHTPLIADIHFNPNVADAAARIVEKVRINPGNFVDSARTFVHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ + F ++ CK++ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 128 TDEEYAEEIKKLRARFIQFLDICKEHHTAVRIGVNHGSLSDRIMSRYGDTPAGIVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F R+C++ +F++ + S+KASN +M+++ RLL+A+M G +YPLHLGVTEAG+GEDGR+
Sbjct: 188 FLRVCKEENFNDVVLSIKASNTGIMIKSVRLLIAKMEQEGMNYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIGTLL DG+GDTIRVSL+E PE EI R+L + ++G P + K +
Sbjct: 248 KSAVGIGTLLADGIGDTIRVSLSEAPEAEIPVARKLVDYITN----REGHTPIKGKTYPH 303
Query: 385 FDF---QRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG 441
FDF +RR ++ G V V ++ +L+ K++ ++G
Sbjct: 304 FDFLRMERRKSKIIGNIGGNNV----------PVTIANALE---------KNVDIIGIIG 344
Query: 442 MPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNL 501
+ D + + + P+ R+VD + V P P+ L
Sbjct: 345 EQYPDYWYIGNNDPDKYPNT--------AARIVDADVYV----------PQPNVYPLFTT 386
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELE-----ILKDIDATMIL----HDLPFNEDK 552
+ S G + T+ ++ SY +L+ LK+ D + + H P E
Sbjct: 387 K--SAGLIPSIKAKTKFLLF-----SYPQLDETLWKTLKENDDIVAILTSGHKNPVGEQ- 438
Query: 553 IGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLL 612
R F L L+ PVI + +DL I AG + G LL DG GDG+ L
Sbjct: 439 -------RAFFHELLCRGLDTPVILQHNYTEN-DNEDLQIKAGADFGTLLSDGFGDGVWL 490
Query: 613 EAPGQ 617
+ G
Sbjct: 491 QNQGN 495
>gi|418753751|ref|ZP_13309992.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. MOR084]
gi|409965874|gb|EKO33730.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. MOR084]
Length = 663
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/308 (52%), Positives = 220/308 (71%), Gaps = 8/308 (2%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D G+V++++ + G ++VR+TV + +
Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTEGSVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L ++ +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQKLKKEGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD +Y +EL+ I E FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSQYDEELERISETFSPLVLRCKELGVSLRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + +YPLHLGVTEAG+G+DGR+
Sbjct: 193 FVRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFDELKMNYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAA--ELQQGVAPFEEKH 381
KSA+GIG+LL+DGLGDTIRVSLTE P EI + LA+ R A E +G + F
Sbjct: 253 KSAVGIGSLLEDGLGDTIRVSLTEDPVSEIPVAKLLADKFNGRVANPESAKGYSEF---- 308
Query: 382 RHYFDFQR 389
R+ F +QR
Sbjct: 309 RNPFTYQR 316
>gi|410449016|ref|ZP_11303082.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira sp. Fiocruz LV3954]
gi|410017136|gb|EKO79202.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira sp. Fiocruz LV3954]
Length = 680
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/308 (51%), Positives = 219/308 (71%), Gaps = 8/308 (2%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D G+V++++ + G ++VR+TV + +
Sbjct: 31 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTEGSVKQILELERAGCEIVRLTVPSQAD 90
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L ++ +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 91 ADNLPSIRQKLKKEGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 149
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD +Y +EL+ I E FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 150 TDSQYDEELERISETFSPLVLRCKELGVSLRIGTNHGSLSDRIMNRYGDTPQGMVESALE 209
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + +YPLHLGVTEAG+G+DGR+
Sbjct: 210 FVRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFDELKMNYPLHLGVTEAGDGKDGRI 269
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSA+GIG+LL+DGLGDTIRVSLTE P EI + LA N + E +G + F
Sbjct: 270 KSAVGIGSLLEDGLGDTIRVSLTEDPVSEIPVAKLLADKFNGRIANPESAKGYSEF---- 325
Query: 382 RHYFDFQR 389
R+ F +QR
Sbjct: 326 RNPFTYQR 333
>gi|359685154|ref|ZP_09255155.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
santarosai str. 2000030832]
Length = 663
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 161/308 (52%), Positives = 220/308 (71%), Gaps = 8/308 (2%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D G+V++++ + G ++VR+TV + +
Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTEGSVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L ++ +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQKLKKEGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD +Y +EL+ I E FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSQYDEELERISETFSPLVLRCKELGVSLRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + +YPLHLGVTEAG+G+DGR+
Sbjct: 193 FVRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFDELKMNYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAA--ELQQGVAPFEEKH 381
KSA+GIG+LL+DGLGDTIRVSLTE P EI + LA+ R A E +G + F
Sbjct: 253 KSAVGIGSLLEDGLGDTIRVSLTEDPVSEIPVAKLLADKFNGRVANPESAKGYSEF---- 308
Query: 382 RHYFDFQR 389
R+ F +QR
Sbjct: 309 RNPFTYQR 316
>gi|418745318|ref|ZP_13301658.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. CBC379]
gi|421113302|ref|ZP_15573747.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. JET]
gi|422005005|ref|ZP_16352210.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
santarosai serovar Shermani str. LT 821]
gi|410793780|gb|EKR91695.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. CBC379]
gi|410801305|gb|EKS07478.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. JET]
gi|417256311|gb|EKT85741.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
santarosai serovar Shermani str. LT 821]
Length = 663
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 160/308 (51%), Positives = 219/308 (71%), Gaps = 8/308 (2%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D G+V++++ + G ++VR+TV + +
Sbjct: 14 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTEGSVKQILELERAGCEIVRLTVPSQAD 73
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L ++ +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 74 ADNLPSIRQKLKKEGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 132
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD +Y +EL+ I E FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 133 TDSQYDEELERISETFSPLVLRCKELGVSLRIGTNHGSLSDRIMNRYGDTPQGMVESALE 192
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + +YPLHLGVTEAG+G+DGR+
Sbjct: 193 FVRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFDELKMNYPLHLGVTEAGDGKDGRI 252
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSA+GIG+LL+DGLGDTIRVSLTE P EI + LA N + E +G + F
Sbjct: 253 KSAVGIGSLLEDGLGDTIRVSLTEDPVSEIPVAKLLADKFNGRIANPESAKGYSEF---- 308
Query: 382 RHYFDFQR 389
R+ F +QR
Sbjct: 309 RNPFTYQR 316
>gi|402308894|ref|ZP_10827896.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. MSX73]
gi|400374473|gb|EJP27391.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. MSX73]
Length = 628
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 219/570 (38%), Positives = 309/570 (54%), Gaps = 63/570 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + +G + +G E+PIR+Q+MTT DT D VE+ RI G +LVR+T QG +E
Sbjct: 9 RRKSTEIHIGAIDMGGENPIRIQSMTTTDTNDTEACVEQSERIIKAGGELVRLTTQGTKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I SL K Y PLVAD+HF P VA A +K+RVNPGN+ D +F +LEY
Sbjct: 69 AENLKNINASLRAKGYLTPLVADVHFNPKVADVAARYAEKVRVNPGNYVDPARKFIKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ IE+ F P + CK+ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYALELQKIEDRFVPFLNICKENHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ DF + + S+K+SN VVMV++ RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKQQDFKDVVISIKSSNTVVMVRSVRLLVDTMEKEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDTIRVSL+E PE EI R L + +G +A Q + P E
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPEAEIPVARHLVDYIGRKAG---QTMIPGEAA--P 303
Query: 384 YFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKA-----------PELLYK 432
YFD+ P++++ VD G + V+ S S D+ + P+ LY
Sbjct: 304 YFDWLH-----PVRRKTHAVDIIGG-EQVPVVIASRSADKEQKCAVVVSNADTRPDYLYT 357
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL 492
A +P + L ++ + D DA L S G I L ++
Sbjct: 358 GQA------LPQE--------LQKQQKYIIDFDAYAHLA-----SEGNIENLKGRVFPIF 398
Query: 493 PHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDK 552
P+ Q + + +LP G S E + LK +++ + ++++
Sbjct: 399 PYNATPFISQVQADVKFLVLPFGA---------PSEEYIACLKAHPEVVVVC-MSNHQNR 448
Query: 553 IGRVQAARRLFEYLSENNLNFPVIHHIQFPNG-IHRDDLVIGAGTNVGALLVDGLGDGLL 611
+G R L LS N L PV+ + + + D + A ++GAL++DGL DG+
Sbjct: 449 LGE---QRALVHELSVNGLTNPVVFCQMYRHSEKEKSDFQLEAAADMGALMIDGLTDGIW 505
Query: 612 L----EAPGQDFDFLRDTSFNLLQGVCLMS 637
L + P + D +T+F +LQ L +
Sbjct: 506 LMNDGDIPAETVD---ETAFGILQAARLRT 532
>gi|407455260|ref|YP_006734151.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci GR9]
gi|407457994|ref|YP_006736299.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci WS/RT/E30]
gi|405781803|gb|AFS20552.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci GR9]
gi|405784835|gb|AFS23581.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci WS/RT/E30]
Length = 606
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/304 (51%), Positives = 204/304 (67%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLLALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD +Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKQYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKH 381
G +KSA+GIGTLL +GLGDTIR SLT P +E+ C L L + PF ++
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEVPVCESLLKYTETYLNLPKRNNPFALEN 308
Query: 382 RHYF 385
F
Sbjct: 309 SESF 312
>gi|288925925|ref|ZP_06419855.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
buccae D17]
gi|288337349|gb|EFC75705.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
buccae D17]
Length = 628
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 218/570 (38%), Positives = 308/570 (54%), Gaps = 63/570 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + +G + +G E+PIR+Q+MTT DT D VE+ RI G +LVR+T QG +E
Sbjct: 9 RRKSTEIHIGAIDMGGENPIRIQSMTTTDTNDTEACVEQAERIIKAGGELVRLTTQGTKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I SL Y PLVAD+HF P VA A +K+RVNPGN+ D +F +LEY
Sbjct: 69 AENLKNINASLRANGYLTPLVADVHFNPKVADVAARYAEKVRVNPGNYVDPARKFIKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ IE+ F P + CK+ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYALELQKIEDRFVPFLNICKENHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ DF + + S+K+SN VVMV++ RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKQQDFKDVVISIKSSNTVVMVRSVRLLVDTMEKEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDTIRVSL+E PE EI R L + +G +A Q + P E
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPEAEIPVARHLVDYIGRKAG---QTMIPGEAA--P 303
Query: 384 YFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKA-----------PELLYK 432
YFD+ P++++ VD G + V+ S S D+ + P+ LY
Sbjct: 304 YFDWLH-----PVRRKTHAVDIIGG-EQVPVVIASRSADKEQKGAVVVSNADTRPDYLYT 357
Query: 433 SLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPL 492
A +P + L ++ + D DA L S G I L ++
Sbjct: 358 GQA------LPQE--------LQKQQKYIIDFDAYAHLA-----SEGNIENLKGRVFPIF 398
Query: 493 PHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDK 552
P+ Q + + +LP G S E + LK +++ + ++++
Sbjct: 399 PYNATPFISQVQADAKFLVLPFGA---------PSEEYIACLKAHPEVVVVC-MSNHQNR 448
Query: 553 IGRVQAARRLFEYLSENNLNFPVIHHIQFPNG-IHRDDLVIGAGTNVGALLVDGLGDGLL 611
+G R L LS N L PV+ + + + D + A ++GAL++DGL DG+
Sbjct: 449 LGE---QRALVHELSVNGLTNPVVFCQMYRHSEKEKSDFQLEAAADMGALMIDGLTDGIW 505
Query: 612 L----EAPGQDFDFLRDTSFNLLQGVCLMS 637
L + P + D +T+F +LQ L +
Sbjct: 506 LMNDGDIPAETVD---ETAFGILQAARLRT 532
>gi|406593367|ref|YP_006740546.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci NJ1]
gi|405789239|gb|AFS27981.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci NJ1]
Length = 606
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/279 (54%), Positives = 197/279 (70%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLLALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD +Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKQYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA+GIGTLL +GLGDTIR SLT P +EI C L
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEIPVCESL 287
>gi|329942773|ref|ZP_08291552.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci Cal10]
gi|332287367|ref|YP_004422268.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 6BC]
gi|384450518|ref|YP_005663118.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 6BC]
gi|384452494|ref|YP_005665091.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 08DC60]
gi|384453470|ref|YP_005666066.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci C19/98]
gi|384454449|ref|YP_005667044.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 02DC15]
gi|392376606|ref|YP_004064384.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
[Chlamydophila psittaci RD1]
gi|407453951|ref|YP_006733059.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci 84/55]
gi|407460611|ref|YP_006738386.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci WC]
gi|449071073|ref|YP_007438153.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci Mat116]
gi|313847949|emb|CBY16945.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
[Chlamydophila psittaci RD1]
gi|325507174|gb|ADZ18812.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 6BC]
gi|328815033|gb|EGF85022.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci Cal10]
gi|328914612|gb|AEB55445.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 6BC]
gi|334692251|gb|AEG85470.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci C19/98]
gi|334694206|gb|AEG87423.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 02DC15]
gi|334695183|gb|AEG88399.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 08DC60]
gi|405780710|gb|AFS19460.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci 84/55]
gi|405787076|gb|AFS25820.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci WC]
gi|449039581|gb|AGE75005.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci Mat116]
Length = 606
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 197/279 (70%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLLALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD +Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKQYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA+GIGTLL +GLGDTIR SLT P +E+ C L
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEVPVCESL 287
>gi|456874781|gb|EMF90050.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Leptospira santarosai str. ST188]
Length = 680
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 160/308 (51%), Positives = 219/308 (71%), Gaps = 8/308 (2%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG+V IG +PI +Q+M +DT D G+V++++ + G ++VR+TV + +
Sbjct: 31 RRQTREVKVGDVKIGGNNPIVIQSMINSDTTDTEGSVKQILELERAGCEIVRLTVPSQAD 90
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD I+ L ++ +PLVADIHF PSVA++ E +K+R+NPGNFAD++ +F +Y
Sbjct: 91 ADNLPSIRQKLKKEGSKVPLVADIHFTPSVAMKAVEYVEKVRINPGNFADKK-KFAVRDY 149
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD +Y +EL+ I E FSPLV +CK+ G ++RIGTNHGSLSDRIM+ YGD+P+GMVESA E
Sbjct: 150 TDSQYDEELERISETFSPLVLRCKELGVSLRIGTNHGSLSDRIMNRYGDTPQGMVESALE 209
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI L +++ + SMKASNP VMVQAYR+L + +YPLHLGVTEAG+G+DGR+
Sbjct: 210 FVRIAESLSYYDIIVSMKASNPQVMVQAYRMLASRFDELKMNYPLHLGVTEAGDGKDGRI 269
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA---NLGMRAAELQQGVAPFEEKH 381
KSA+GIG+LL+DGLGDTIRVSLTE P EI + LA N + E +G + F
Sbjct: 270 KSAVGIGSLLEDGLGDTIRVSLTEDPVSEIPVAKLLADKFNGRIANPESAKGYSEF---- 325
Query: 382 RHYFDFQR 389
R+ F +QR
Sbjct: 326 RNPFAYQR 333
>gi|407456642|ref|YP_006735215.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci VS225]
gi|405783903|gb|AFS22650.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci VS225]
Length = 606
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 197/279 (70%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLLALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD +Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKQYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA+GIGTLL +GLGDTIR SLT P +E+ C L
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEVPVCESL 287
>gi|282877262|ref|ZP_06286094.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
buccalis ATCC 35310]
gi|281300603|gb|EFA92940.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
buccalis ATCC 35310]
Length = 615
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 164/307 (53%), Positives = 208/307 (67%), Gaps = 3/307 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V VGN+ IG ++P+R+Q+MTT DT D +E+ RI G +LVR+T QG+RE
Sbjct: 9 RRKSNVVHVGNIDIGGDNPVRIQSMTTTDTNDTEACIEQAERIIQAGGELVRLTTQGRRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I + L K Y+ PLVAD+HF +VA A+ +K+R+NPGN+ D +F QLEY
Sbjct: 69 AENLKNIHDGLHAKGYDTPLVADVHFNANVADVAAQHTEKVRINPGNYVDPARKFIQLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IE+ F P + CK A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYARELKKIEDRFVPFLNICKANHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K F N + S+KASN VVMVQ+ RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKKQQFDNVVISIKASNTVVMVQSVRLLVDTMDKEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDTIRVSL+E PE EI + L + + RA L P KH +
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEIPVAKHLVDYVAKRAGHLMIPAEP--NKHFN 306
Query: 384 YFDFQRR 390
Y QRR
Sbjct: 307 YLRPQRR 313
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
RV R L + N + PV+ Q + D + A ++GAL++DGL DG+ L
Sbjct: 423 RVGDQRALVHEMMNNGVYNPVVF-AQMYRHDEKSDFQLDASADMGALMIDGLTDGIWLMN 481
Query: 615 PGQDFD-FLRDTSFNLLQG 632
G+ D L DT+FN+LQ
Sbjct: 482 DGKLSDSVLEDTAFNILQA 500
>gi|237832095|ref|XP_002365345.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Toxoplasma gondii ME49]
gi|211963009|gb|EEA98204.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Toxoplasma gondii ME49]
Length = 1283
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/352 (49%), Positives = 215/352 (61%), Gaps = 66/352 (18%)
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGN------------------------- 95
+PAS S YC S+ T R TRTV+VG
Sbjct: 330 EPASSSS--------YCVSVASTQRLPTRTVVVGRGAHAAPYHDFFSSASSASSALPPPG 381
Query: 96 -------VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADAC 148
V IG HP+ VQTMT +DT+DV TVE++ + A+ GA +VR+TVQG +E +A
Sbjct: 382 SWREGYPVLIGGAHPLVVQTMTNSDTRDVQATVEQIRKCAEAGASMVRVTVQGMKEVEAS 441
Query: 149 FEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTD-- 206
IK L Q N IPLVAD+HF P V L AE FDK+R+NPGNFAD ++E E
Sbjct: 442 KFIKEKLDQANLPIPLVADVHFQPRVGLAAAEIFDKVRINPGNFADGAKKWEDEETGGQT 501
Query: 207 --------------DEYQKELQ----------HIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
DE +E++ IEE+ PLVEKCK + A+RIGTNHGS
Sbjct: 502 GDSGRETEDERKLGDERNREVESDRRFDDGHKRIEELLVPLVEKCKAFNTALRIGTNHGS 561
Query: 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
LS RI+ YGD+PRGMVESAFEF+ IC + +F NF FSMK+SNP VMV AYRLL +EM
Sbjct: 562 LSARILRRYGDTPRGMVESAFEFSDICVRENFRNFCFSMKSSNPKVMVHAYRLLASEMLR 621
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+P+HLGVTEAGEGEDGR+KSA+GIG+LLQDG+GDT+RVSLTEPP +EI
Sbjct: 622 RNELFPIHLGVTEAGEGEDGRLKSAVGIGSLLQDGIGDTLRVSLTEPPWEEI 673
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 151/390 (38%), Gaps = 134/390 (34%)
Query: 377 FEEKHRHYFDFQRR------------SGQLPIQKEG------EEVDYRGVLHRDGSVLMS 418
FEEK R++ + ++R GQ ++ G E+ +LHRDG++++
Sbjct: 787 FEEKMRNFENIEKRKIRPLFQKQSLAGGQTAAERTGDGAETPEKRQEERILHRDGTLMVR 846
Query: 419 VSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLR--ELPSVDDHD----------A 466
VS + L+ PE+LYK+L ++V G PF+ ++VDSI + LPS D +D A
Sbjct: 847 VSPEWLEIPEVLYKALGCRVVGGKPFRTASSVDSIYVSSLSLPSSDHNDSRDLISRAAHA 906
Query: 467 RLALKRLVDISMGVITPLSE-----------QLTKP------------------------ 491
R L L + +GV+ P E ++TK
Sbjct: 907 RETLHALQEAGIGVLVPFQELAYLLSLEQQQKVTKASHAGRGAQGSEAGLTRDNHAEEAE 966
Query: 492 ----------LPHA----MVLVNLQELSTGAYKLLP------EGTRLVVSLRGDESYEEL 531
LP A + ++ L++ + +LLP +G L+ G+E+ EE+
Sbjct: 967 RERLLLQTSLLPSARNGLVGILRLRDAAAVRGRLLPFVRDRLDGVALLAD--GEETEEEI 1024
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLS------------------------ 567
+ + +++A + P G V A RR + L
Sbjct: 1025 DAVLEMEALLFFLLRPHARPAHG-VAATRRFLDILKRREEAEAKKTDAMRGGAQPKECRE 1083
Query: 568 ENNLNFPVIHHIQFPNGIHRDDLVIG----------------------AGTNVGALLVDG 605
E PVIH ++ ++ + G AG VG+LL+D
Sbjct: 1084 EGPGGIPVIHWLERTASAVAENDITGEEKEKADRVTREQKEERESATYAGWEVGSLLMDA 1143
Query: 606 LGDGLLLEAPGQDFDFLRDTSFNLLQGVCL 635
LG+G+L++ P FNLLQ L
Sbjct: 1144 LGEGVLVDLPALSLPRQIRLGFNLLQACRL 1173
>gi|221486797|gb|EEE25043.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Toxoplasma gondii GT1]
Length = 1283
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/352 (49%), Positives = 215/352 (61%), Gaps = 66/352 (18%)
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGN------------------------- 95
+PAS S YC S+ T R TRTV+VG
Sbjct: 331 EPASSSS--------YCVSVASTQRLPTRTVVVGRGAHAAPYHDFFSSASSASSALPPPG 382
Query: 96 -------VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADAC 148
V IG HP+ VQTMT +DT+DV TVE++ + A+ GA +VR+TVQG +E +A
Sbjct: 383 SWREGYPVLIGGAHPLVVQTMTNSDTRDVQATVEQIRKCAEAGASMVRVTVQGMKEVEAS 442
Query: 149 FEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTD-- 206
IK L Q N IPLVAD+HF P V L AE FDK+R+NPGNFAD ++E E
Sbjct: 443 KFIKEKLDQANLPIPLVADVHFQPRVGLAAAEIFDKVRINPGNFADGAKKWEDEETGGQT 502
Query: 207 --------------DEYQKELQ----------HIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
DE +E++ IEE+ PLVEKCK + A+RIGTNHGS
Sbjct: 503 GDSRRETEDERKLGDERNREVESDRRFDDGHKRIEELLVPLVEKCKAFNTALRIGTNHGS 562
Query: 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
LS RI+ YGD+PRGMVESAFEF+ IC + +F NF FSMK+SNP VMV AYRLL +EM
Sbjct: 563 LSARILRRYGDTPRGMVESAFEFSDICVRENFRNFCFSMKSSNPKVMVHAYRLLASEMLR 622
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+P+HLGVTEAGEGEDGR+KSA+GIG+LLQDG+GDT+RVSLTEPP +EI
Sbjct: 623 RNELFPIHLGVTEAGEGEDGRLKSAVGIGSLLQDGIGDTLRVSLTEPPWEEI 674
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 151/390 (38%), Gaps = 135/390 (34%)
Query: 377 FEEKHRHYFDFQRR------------SGQLPIQKEG------EEVDYRGVLHRDGSVLMS 418
FEEK R++ + ++R GQ ++ G E+ +LHRDG++++
Sbjct: 788 FEEKMRNFENIEKRKIRPLFQKQSLAGGQTAAERTGDGAETPEKRQEERILHRDGTLMVR 847
Query: 419 VSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLR--ELPSVDDHD----------A 466
VS + L+ PE+LYK+L ++V G P + +++VDSI + LPS DHD A
Sbjct: 848 VSPEWLEIPEVLYKALGCRVVGGKPLRTVSSVDSIYVSSLSLPS-SDHDSRDLISRAAHA 906
Query: 467 RLALKRLVDISMGVITPLSE-----------QLTKP------------------------ 491
R L L + +GV+ P E ++TK
Sbjct: 907 RETLHALQEAGIGVLVPFQELAYLLSLEQQQKVTKASHAGRGAQGSEAGLTRDNHAEEAE 966
Query: 492 ----------LPHA----MVLVNLQELSTGAYKLLP------EGTRLVVSLRGDESYEEL 531
LP A + ++ L++ + +LLP +G L+ G+E+ EE+
Sbjct: 967 RERLLLQTSLLPSARNGLVGILRLRDAAAVRGRLLPFVRDRLDGVALLAD--GEETEEEI 1024
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLS------------------------ 567
+ + +++A + P G V A RR + L
Sbjct: 1025 DAVLEMEALLFFLLRPHARPAHG-VAATRRFLDILKRREEAEAKKTDAMRGGAQPRECRE 1083
Query: 568 ENNLNFPVIHHIQFPNGIHRDDLVIG----------------------AGTNVGALLVDG 605
E PVIH ++ ++ + G AG VG+LL+D
Sbjct: 1084 EGPGGIPVIHWLERTASAVAENDITGEEKEKADRVTREQKEERESATYAGWEVGSLLMDA 1143
Query: 606 LGDGLLLEAPGQDFDFLRDTSFNLLQGVCL 635
LG+G+L++ P FNLLQ L
Sbjct: 1144 LGEGVLVDLPALSLPRQIRLGFNLLQACRL 1173
>gi|221506500|gb|EEE32117.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, putative
[Toxoplasma gondii VEG]
Length = 1283
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/352 (49%), Positives = 215/352 (61%), Gaps = 66/352 (18%)
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGN------------------------- 95
+PAS S YC S+ T R TRTV+VG
Sbjct: 331 EPASSSS--------YCVSVASTQRLPTRTVVVGRGAHAAPYHDFFSSASSASSALPPPG 382
Query: 96 -------VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADAC 148
V IG HP+ VQTMT +DT+DV TVE++ + A+ GA +VR+TVQG +E +A
Sbjct: 383 SWREGYPVLIGGAHPLVVQTMTNSDTRDVQATVEQIRKCAEAGASMVRVTVQGMKEVEAS 442
Query: 149 FEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTD-- 206
IK L Q N IPLVAD+HF P V L AE FDK+R+NPGNFAD ++E E
Sbjct: 443 KFIKEKLDQANLPIPLVADVHFQPRVGLAAAEIFDKVRINPGNFADGAKKWEDEETGGQT 502
Query: 207 --------------DEYQKELQ----------HIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
DE +E++ IEE+ PLVEKCK + A+RIGTNHGS
Sbjct: 503 GDSGRETEDERKLGDERNREVESDRRFDDGHKRIEELLVPLVEKCKAFNTALRIGTNHGS 562
Query: 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
LS RI+ YGD+PRGMVESAFEF+ IC + +F NF FSMK+SNP VMV AYRLL +EM
Sbjct: 563 LSARILRRYGDTPRGMVESAFEFSDICVRENFRNFCFSMKSSNPKVMVHAYRLLASEMMR 622
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+P+HLGVTEAGEGEDGR+KSA+GIG+LLQDG+GDT+RVSLTEPP +EI
Sbjct: 623 RNELFPIHLGVTEAGEGEDGRLKSAVGIGSLLQDGIGDTLRVSLTEPPWEEI 674
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 151/390 (38%), Gaps = 135/390 (34%)
Query: 377 FEEKHRHYFDFQRR------------SGQLPIQKEG------EEVDYRGVLHRDGSVLMS 418
FEEK R++ + ++R GQ ++ G E+ +LHRDG++++
Sbjct: 788 FEEKMRNFENIEKRKIRPLFQKQSLAGGQTAAERTGDGAETPEKKQEERILHRDGTLMVR 847
Query: 419 VSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLR--ELPSVDDHD----------A 466
VS + L+ PE+LYK+L ++V G P + +++VDSI + LPS DHD A
Sbjct: 848 VSPEWLEIPEVLYKALGCRVVGGKPLRTVSSVDSIYISSLSLPS-SDHDSRDLISRAAHA 906
Query: 467 RLALKRLVDISMGVITPLSE-----------QLTKP------------------------ 491
R L L + +GV+ P E ++TK
Sbjct: 907 RETLHALQEAGIGVLVPFQELAYLLSLEQQQKVTKASHAGRGAQGSEAGLTRDNHAEEAE 966
Query: 492 ----------LPHA----MVLVNLQELSTGAYKLLP------EGTRLVVSLRGDESYEEL 531
LP A + ++ L++ + +LLP +G L+ G+E+ EE+
Sbjct: 967 RERLLLQTSLLPSARNGLVGILRLRDAAAVRGRLLPFVRDRLDGVALLAD--GEETEEEI 1024
Query: 532 EILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLS------------------------ 567
+ + +++A + P G V A RR + L
Sbjct: 1025 DAVLEMEALLFFLLRPHARPAHG-VAATRRFLDILKRREEAEAKKTDAMRGGAQPKECRE 1083
Query: 568 ENNLNFPVIHHIQFPNGIHRDDLVIG----------------------AGTNVGALLVDG 605
E PVIH ++ ++ + G AG VG+LL+D
Sbjct: 1084 EGPGGIPVIHWLERTASAVAENDITGEEKEKADRVTREQKEERESATYAGWEVGSLLMDA 1143
Query: 606 LGDGLLLEAPGQDFDFLRDTSFNLLQGVCL 635
LG+G+L++ P FNLLQ L
Sbjct: 1144 LGEGVLVDLPALSLPRQIRLGFNLLQACRL 1173
>gi|371776053|ref|ZP_09482375.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anaerophaga
sp. HS1]
Length = 626
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 208/562 (37%), Positives = 293/562 (52%), Gaps = 49/562 (8%)
Query: 74 QKY--CESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQG 131
QKY C+S + R KT V VGNV IG + PIRVQ+MTT +T D A TVE+ ++IA G
Sbjct: 4 QKYHFCQSYFQYCRNKTAPVKVGNVTIGGDSPIRVQSMTTTNTLDTAATVEQSLKIARAG 63
Query: 132 ADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGN 191
+LVRIT QG+REA IK SL + +PLVAD+HF PS A A+ +K+R+NPGN
Sbjct: 64 GELVRITTQGRREALNLKSIKESLTRLGCEVPLVADVHFNPSAADIAAQLIEKVRINPGN 123
Query: 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY 251
F +F +E +E ++ L+ I + P + +CKK+ A+RIG NHGSLSDRIMS Y
Sbjct: 124 FTGGAKKFRHIEAGSEEDREGLEQIRQKLIPFLRQCKKHFTAIRIGVNHGSLSDRIMSKY 183
Query: 252 GDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311
GD+P GMVES E+ RICR+ +F++ + S+K+SN VMV RLLV M YP+HL
Sbjct: 184 GDTPEGMVESCMEYLRICREENFNDVVLSIKSSNTRVMVHTVRLLVHRMGEENMSYPIHL 243
Query: 312 GVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQ 371
GVTEAG GEDGR+KSA+GIG LL DG+GDT+RVSLTEPPE EI + L + + A
Sbjct: 244 GVTEAGSGEDGRLKSAVGIGALLIDGIGDTLRVSLTEPPENEIPVAKSLVHYISKKAN-H 302
Query: 372 QGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKA-PELL 430
VA +H + ++++ +V+ G G +++V+ D PELL
Sbjct: 303 PPVAETNPQHYSPCSY--------VKRQTHQVETIG-----GENVVAVAADIRNVPPELL 349
Query: 431 YKSLAAKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTK 490
++++ S + LP + H+ RL + E +
Sbjct: 350 QFHTLPEVII---------CHSNQINHLPE-NLHNTRLVV---------------EHQSN 384
Query: 491 PLPHAMVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNE 550
H + L ++ + +G V D + L+ T++L
Sbjct: 385 KFGHKPGTIPLFKIDEEWHHF--DGPVFVELTYPDLNSHNANRLRSKKDTVLL----LKS 438
Query: 551 DKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL 610
+ I R F + L+ PVI H + + + D + A + G L +DG GDGL
Sbjct: 439 NNINSTAEQRAFFMTMQNLGLSHPVIIHGYYEDK-NLKDFQLKAAADKGLLFLDGYGDGL 497
Query: 611 LLEAPGQDFDFLRDTSFNLLQG 632
L P TSF +LQ
Sbjct: 498 CLSTPNITTSQAIQTSFGILQA 519
>gi|384451521|ref|YP_005664119.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 01DC11]
gi|334693231|gb|AEG86449.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
psittaci 01DC11]
Length = 606
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 196/279 (70%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLLALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD +Y L +EE FSPLVEKCK G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKQYADSLLRLEEKFSPLVEKCKCLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA+GIGTLL +GLGDTIR SLT P +E+ C L
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEVPVCESL 287
>gi|407459236|ref|YP_006737339.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci M56]
gi|405785775|gb|AFS24520.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
psittaci M56]
Length = 606
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 196/279 (70%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ VRR T +V +GN+ +GS+H I+ Q+MTT T DV TVE++ + + ++VR+TVQG
Sbjct: 9 QAVRRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVEQICALVEARCEIVRVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+E+ AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKESQACEHIKERLIALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
TD +Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTSTDKQYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ IC KLD+ + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEICEKLDYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA+GIGTLL +GLGDTIR SLT P +EI C L
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTQEIPVCESL 287
>gi|196232814|ref|ZP_03131664.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chthoniobacter flavus Ellin428]
gi|196223013|gb|EDY17533.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chthoniobacter flavus Ellin428]
Length = 643
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/312 (52%), Positives = 204/312 (65%), Gaps = 34/312 (10%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC + ++ RR TR V GNV IG +PIRVQ+M T DT D A ++++ + + G ++V
Sbjct: 22 YCLNPYRYSRRATREVRAGNVGIGGANPIRVQSMITCDTMDTAASIQQTLDLVAVGCEIV 81
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT ++A I L + +P+VADIHF P A+ A+ +K+RVNPGN+AD
Sbjct: 82 RITAPTVKDAANLQHIVAGLRAQGCEVPIVADIHFKPEAAMEAAKWVEKVRVNPGNYADS 141
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F EYTD EY EL I E FSPLV+ CK++GRA+RIGTNHGSLSDRIM+ YGDSP
Sbjct: 142 K-KFAVKEYTDTEYAAELDRIRERFSPLVQFCKEHGRAMRIGTNHGSLSDRIMNRYGDSP 200
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM--------------- 300
GMVESA EFARI R+LD+H F+FSMKASNP VM++AYRLLVA +
Sbjct: 201 LGMVESALEFARIARELDYHAFVFSMKASNPKVMIEAYRLLVARLDELGNAEGEMRNVEG 260
Query: 301 ------------------YVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTI 342
H W YP+HLGVTEAG+GEDGR+KSAIGIG+LL DG+GDTI
Sbjct: 261 GMPNKGGGAEPSPNSEFRTPHSWSYPIHLGVTEAGDGEDGRIKSAIGIGSLLNDGIGDTI 320
Query: 343 RVSLTEPPEKEI 354
RVSLTE EI
Sbjct: 321 RVSLTEDSVHEI 332
>gi|89898391|ref|YP_515501.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
felis Fe/C-56]
gi|123483227|sp|Q254D2.1|ISPG_CHLFF RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|89331763|dbj|BAE81356.1| 1-hydroxy-2-methyl-2-butenyl 4-diphosphate synthase [Chlamydophila
felis Fe/C-56]
Length = 606
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/304 (51%), Positives = 201/304 (66%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+T RR T +V +G++ +GSEH I++Q+MTT T DV TV ++ + + D+ R+TVQG
Sbjct: 9 QTARRYTHSVKIGSLFVGSEHSIKMQSMTTTPTSDVDATVAQICSLVEAKCDIARVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+EA AC IK L+ +IPLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 VKEAQACEHIKERLLTMGLDIPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFSG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+RIM YGD+ GMV S
Sbjct: 129 KTYTDKNYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERIMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ ++C L + + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIKVCENLGYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKH 381
G +KSA+GIGTLL +GLGDTIR SLT P +EI C L L + PF ++
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTEEIPVCESLLKHTTIYLNLPKQENPFALEN 308
Query: 382 RHYF 385
F
Sbjct: 309 SESF 312
>gi|45737901|gb|AAS75817.1| (E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Nicotiana
benthamiana]
Length = 268
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 161/195 (82%), Positives = 172/195 (88%), Gaps = 1/195 (0%)
Query: 442 MPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNL 501
MPFKDLATVDSI LRELP VDD D+RLALKRLVDISMGVITPLSEQLTKPL + MVLV L
Sbjct: 1 MPFKDLATVDSIPLRELPPVDDKDSRLALKRLVDISMGVITPLSEQLTKPLTNVMVLVTL 60
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARR 561
+ELS GA KLLPEGTRLVVS+RGDES +ELEILK D TMILH LP+ E+KIGRV AARR
Sbjct: 61 KELSGGAQKLLPEGTRLVVSVRGDESKDELEILKSTDVTMILHHLPYTEEKIGRVHAARR 120
Query: 562 LFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDF 621
LFEYLS+N+LNFPVIHHI FPN HRDDLVIGAG N GALLVDGLGDG+LLEAP QDFDF
Sbjct: 121 LFEYLSQNSLNFPVIHHIHFPNDTHRDDLVIGAGANAGALLVDGLGDGILLEAPDQDFDF 180
Query: 622 LRDTSFNLLQGVCLM 636
LR+TSFNLLQG C M
Sbjct: 181 LRNTSFNLLQG-CRM 194
>gi|393782921|ref|ZP_10371101.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
salyersiae CL02T12C01]
gi|392671279|gb|EIY64753.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
salyersiae CL02T12C01]
Length = 615
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 214/552 (38%), Positives = 293/552 (53%), Gaps = 55/552 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G HPIR+Q+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 10 RRETSEVNIGAVPLGGPHPIRIQSMTNTSTQDTEACVEQAKRIVDAGGEYVRLTTQGIKE 69
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 70 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 129
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 130 TDEEYAQELQKIRDRFVPFLNICKENRTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 189
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + FH+ + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 190 FLRICVEEQFHDVVISIKASNTVVMVKTVRLLVTVMEKEGMAFPLHLGVTEAGDGEDGRI 249
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L + +H H
Sbjct: 250 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVDY-------------ITARHEHP 296
Query: 385 FDFQRRSGQLP-IQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMP 443
+ +P I+ G +Y R + + ++ D L P +L + V
Sbjct: 297 Y--------IPGIEATG--FNYVSPSRRKTNAIRNIGGDHL--PVVLADRMDGNTEVNPQ 344
Query: 444 FKDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP-LPHAMVLVNL 501
F T D I RELP+ + + L D+ G E T P HA + +
Sbjct: 345 F----TPDYIYAGRELPAEREANVEYILD--ADVWEG------ETGTWPAFNHAQLPLIG 392
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARR 561
S + +P + DE L+I ++ ++ + +++G +A
Sbjct: 393 MCQSELKFLFMP------YMAQTDEVIACLKIHPEV----VIISQSNHPNRVGEHRA--- 439
Query: 562 LFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ-DFD 620
L L L PVI + + +DL I A ++GAL+ DGL DG+ L G
Sbjct: 440 LIHQLMSEGLKNPVIFFQHYQEEV-AEDLQIKAAADMGALIFDGLCDGIFLFNQGSLSHA 498
Query: 621 FLRDTSFNLLQG 632
+ T+F +LQ
Sbjct: 499 VIDATAFGILQA 510
>gi|29840185|ref|NP_829291.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
caviae GPIC]
gi|33301244|sp|Q823I7.1|ISPG_CHLCV RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|29834533|gb|AAP05169.1| gcpE protein [Chlamydophila caviae GPIC]
Length = 606
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 154/304 (50%), Positives = 199/304 (65%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ RR T +V +GN+ +GSEH I++Q+MTT T DV TV ++ + + ++ R+TVQG
Sbjct: 9 QAARRHTHSVKIGNLYVGSEHSIKMQSMTTTPTADVEATVTQICALVEAKCEIARVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+EA AC IK L+ IPLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKEAQACEHIKERLLSMGIAIPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD Y L +EE F+PLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KTYTDKNYADSLLRLEEKFTPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ +C KL + + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEVCEKLGYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGIGLD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKH 381
G +KSA+GIGTLL +GLGDTIR SLT P EI C L +L + PF ++
Sbjct: 249 GIIKSAVGIGTLLTEGLGDTIRCSLTGCPTTEIPVCESLLKHTTTYLDLPKKENPFALEN 308
Query: 382 RHYF 385
F
Sbjct: 309 SETF 312
>gi|15618288|ref|NP_224573.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pneumoniae CWL029]
gi|15835906|ref|NP_300430.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pneumoniae J138]
gi|16752666|ref|NP_444931.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pneumoniae AR39]
gi|33241718|ref|NP_876659.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pneumoniae TW-183]
gi|8928116|sp|Q9Z8H0.1|ISPG_CHLPN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|4376650|gb|AAD18517.1| GcpE Protein [Chlamydophila pneumoniae CWL029]
gi|7189308|gb|AAF38230.1| gcpE protein [Chlamydophila pneumoniae AR39]
gi|8978745|dbj|BAA98581.1| GcpE protein [Chlamydophila pneumoniae J138]
gi|33236227|gb|AAP98316.1| AarC [Chlamydophila pneumoniae TW-183]
Length = 613
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 207/302 (68%), Gaps = 1/302 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT TV +GN+ IGS+H I+ Q+MTT T D+ TVE++ +A+ D+VR+TVQG +E
Sbjct: 12 RRKTHTVRIGNLYIGSDHSIKTQSMTTTLTTDIDSTVEQIYALAEHNCDIVRVTVQGIKE 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE- 203
A AC +IK L+ NIPLVADIHF P A+ VA+ DK+R+NPGN+ D+R F+ +
Sbjct: 72 AQACEKIKERLIALGLNIPLVADIHFFPQAAMLVADFADKVRINPGNYIDKRNMFKGTKI 131
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT+ Y + L +EE F+PLVEKCK+ G+A+RIG NHGSLS+RIM YGD+ GMV SA
Sbjct: 132 YTEASYAQSLLRLEEKFAPLVEKCKRLGKAMRIGVNHGSLSERIMQKYGDTIEGMVASAI 191
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
E+ +C KL++ + +FSMK+SNP +MV AYR L ++ GW YPLHLGVTEAG G DG
Sbjct: 192 EYIAVCEKLNYRDVVFSMKSSNPKIMVTAYRQLAKDLDARGWLYPLHLGVTEAGMGVDGI 251
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRH 383
+KSA+GIGTLL +GLGDTIR SLT P EI C L +L + PF +H
Sbjct: 252 IKSAVGIGTLLAEGLGDTIRCSLTGCPTTEIPVCDSLLRHTKIYLDLPEKKNPFSLQHSE 311
Query: 384 YF 385
F
Sbjct: 312 NF 313
>gi|303236135|ref|ZP_07322737.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
disiens FB035-09AN]
gi|302483717|gb|EFL46710.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
disiens FB035-09AN]
Length = 632
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 212/561 (37%), Positives = 307/561 (54%), Gaps = 51/561 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ VG++ +G ++P+R+Q+MTT +T D +V + RI G +LVR+T QGKRE
Sbjct: 9 RRKSSVTHVGSLDMGGDNPVRIQSMTTTNTNDTEASVAQAKRIIAAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L ++ PL AD+HF +VA A +K+R+NPGN+ D F+ LEY
Sbjct: 69 AENLKYINAQLREEGIMTPLCADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKVLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KELQ IE+ +P +E CK+ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 129 TDEEYAKELQKIEKRLTPFIEICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI +K +F++ + S+KASN VVMV++ RLLVAEM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFKKQNFNDIVISIKASNTVVMVRSVRLLVAEMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDTIRVSL+E PE EI R L + + L PF +
Sbjct: 249 KSAVGIGALLNDGIGDTIRVSLSEDPEDEIPVARYLTRYIRQKKGHLIVPADPF-----N 303
Query: 384 YFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMP 443
FD+ R P ++E V+ G G + V Q K + + +V +P
Sbjct: 304 GFDYLR-----PERRETVAVENIG-----GDNVPVVIASQNK------EDSGSTVVSALP 347
Query: 444 FKDLATVDSILLRELPS----VDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLV 499
D V+ L +L + D+++ + L ++ I P+ PL
Sbjct: 348 KPDYIYVNDKLPEQLKDGQRYIIDYNSYIELASKGELPSENIYPIFPTPAIPL------- 400
Query: 500 NLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA- 558
+ T KL + +V G S E L LK +++ + +++K+ +A
Sbjct: 401 ----IGTVNSKL-----KFLVVRYGTPSEELLACLK-FHPEVVVICVSLHQNKLAEQRAL 450
Query: 559 ARRLFEYLSENNLNFPVIHHIQFPNGIH------RDDLVIGAGTNVGALLVDGLGDGLLL 612
A ++ +N L F ++ + + ++ + A ++GAL++DGL DGL L
Sbjct: 451 AHQMMIAGVKNPLIFAQMYQFSTDDKVKENEPTAKEQFQLSAAADMGALMMDGLTDGLWL 510
Query: 613 EAPGQ-DFDFLRDTSFNLLQG 632
G D + T+F +LQ
Sbjct: 511 MNDGNLSQDDIEQTAFGILQA 531
>gi|269925149|ref|YP_003321772.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermobaculum terrenum ATCC BAA-798]
gi|269788809|gb|ACZ40950.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermobaculum terrenum ATCC BAA-798]
Length = 690
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/284 (57%), Positives = 202/284 (71%), Gaps = 1/284 (0%)
Query: 71 VPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQ 130
V +YC + RR T VMVGNV +G +PIRVQ+MTT TKDV TV +++ +A
Sbjct: 7 VTSNRYCVDPYSYKRRCTHEVMVGNVGVGGNNPIRVQSMTTTRTKDVESTVNQIVSLARV 66
Query: 131 GADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPG 190
G ++VR+T +A A +IK L KN +IP+VAD+HF+P A+ A DK+R+NPG
Sbjct: 67 GCEIVRVTTPTPADARAIKDIKKELQSKNIHIPIVADVHFSPHAAMEAALWADKVRINPG 126
Query: 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSY 250
NFAD + F EYTD+EY K L+ I E PLV +CK+ G ++RIGTNHGSLSDRIMS
Sbjct: 127 NFADTKL-FHIKEYTDEEYAKHLEKIAEKLYPLVMRCKERGISMRIGTNHGSLSDRIMSR 185
Query: 251 YGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLH 310
YGD+P GMVESA EF R+C + + + + SMKASNP VM+ AYRLL A M +G YP H
Sbjct: 186 YGDTPLGMVESALEFVRMCEEWGYKDIILSMKASNPKVMIAAYRLLAARMLEYGMTYPFH 245
Query: 311 LGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
LGVTEAG GEDGR+KSAIGIGTLL+DG+GDT+RVSLTE PE EI
Sbjct: 246 LGVTEAGNGEDGRIKSAIGIGTLLEDGIGDTVRVSLTEDPENEI 289
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 252 GDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311
G +V+ +A + ++ + +++ + ++AYRLL + + G D+ L L
Sbjct: 469 GKHDYSVVDELISYALKVEQFGVNDLILALRIPDRSYRIRAYRLLDSRLRELGKDWNLLL 528
Query: 312 GVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
VTE D + ++IG+G+LL DG+G + + +P E++I
Sbjct: 529 TVTE-----DDLIDASIGLGSLLCDGIGSMVSIEGNKPYEEKI 566
>gi|332881451|ref|ZP_08449100.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|357045527|ref|ZP_09107162.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Paraprevotella clara YIT 11840]
gi|332680449|gb|EGJ53397.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|355531389|gb|EHH00787.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Paraprevotella clara YIT 11840]
Length = 624
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 212/562 (37%), Positives = 292/562 (51%), Gaps = 56/562 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G HPIRVQ+MT T D V + +RIA+ G D VR+T QG RE
Sbjct: 8 RRETGEVQIGGTPLGGNHPIRVQSMTNTSTMDTEACVAQTLRIAEAGGDYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I + +PLVAD+HF P VA A +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLRNINAGVRAAGCAVPLVADVHFNPKVADVAALYAEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IEE F P + C++ A+RIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 128 TDEEYAQELKKIEERFVPFLRICRENHTAIRIGVNHGSLSDRIMSRYGDTPEGIVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC K DF + + S+KASN VVMV++ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVKEDFKDVVVSIKASNTVVMVRSVRLLVDAMEREGMRFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDT+RVSL+E PE EI R+L + +
Sbjct: 248 KSAVGIGALLADGIGDTVRVSLSEAPEAEIPVARKLVDYVL------------------- 288
Query: 385 FDFQRRSGQLPI-QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAK-LVVGM 442
RR G + I E E+ DY + R + ++ D + LAA + G
Sbjct: 289 ----RRDGAMMIPAAEAEDFDYLNPVRRKTRAVRNIGGDHVPVVIADRMDLAASGRLKGF 344
Query: 443 PFKDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP-LPHAMVLVN 500
D I R LP V++ + + D+ G E T P P+ M+
Sbjct: 345 KAHPDFRPDYIYCGRNLPPVEEREGDYIVD--ADVWTG------ESGTYPAFPYNMLPFM 396
Query: 501 LQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAAR 560
Q + + L G EE+ +++ +++++G R
Sbjct: 397 SQCTADLKFLFLSYGA----------LNEEVRACLKYHPEVVVISQSNHQNRLGE---HR 443
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGI-HRDDLVIGAGTNVGALLVDGLGDGLLLEAPG--- 616
L L+ L PV+ Q+ +G ++D I + ++GALL DGL DGL L G
Sbjct: 444 ALVHELTREGLQNPVVIFQQYAHGQEEKEDFQIESAADMGALLFDGLCDGLYLYNNGTLE 503
Query: 617 -QDFDFLRDTSFNLLQGVCLMS 637
+D D T+F +LQ L +
Sbjct: 504 HRDIDA---TAFGILQAARLRT 522
>gi|330996565|ref|ZP_08320447.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Paraprevotella xylaniphila YIT 11841]
gi|329573121|gb|EGG54740.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Paraprevotella xylaniphila YIT 11841]
Length = 624
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 210/559 (37%), Positives = 291/559 (52%), Gaps = 50/559 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G HPIRVQ+MT T D V + +RIA+ G D VR+T QG RE
Sbjct: 8 RRETGEVQIGGTPLGGNHPIRVQSMTNTSTMDTEACVAQTLRIAEAGGDYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I + +PLVAD+HF P VA A +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLRNINAGVRAAGCAVPLVADVHFNPKVADVAALYAEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IEE F P + C++ A+RIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 128 TDEEYAQELKKIEERFVPFLRICRENHTAIRIGVNHGSLSDRIMSRYGDTPEGIVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC K F + + S+KASN VVMV++ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVKEGFKDVVVSIKASNTVVMVRSVRLLVDAMEREGMCFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDT+RVSL+E PE EI R+L + +
Sbjct: 248 KSAVGIGALLADGIGDTVRVSLSEAPEAEIPVARKLVDYVL------------------- 288
Query: 385 FDFQRRSGQLPI-QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAK-LVVGM 442
RR G + I E E+ DY + R + ++ D + LAA + G
Sbjct: 289 ----RRDGAMMIPAAEAEDFDYLNPVRRKTRAVRNIGGDHVPVVVADRMDLAASGRLKGF 344
Query: 443 PFKDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP-LPHAMVLVN 500
D I R LP V++ + + D+ G E T P P+ M+
Sbjct: 345 KAHPDFRPDYIYCGRNLPPVEEREGDYIVD--ADVWTG------EPGTYPAFPYNMLPFM 396
Query: 501 LQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAAR 560
Q + + L G EE+ +++ +++++G R
Sbjct: 397 SQCTADLKFLFLSYGA----------LNEEVRACLKYHPEVVVISQSNHQNRLGE---HR 443
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGI-HRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ-D 618
L L+ L PV+ Q+ +G+ ++D I + ++GALL DGL DGL L G D
Sbjct: 444 ALVHELTREGLQNPVVIFQQYAHGLEEKEDFQIESAADMGALLFDGLCDGLYLYNNGTLD 503
Query: 619 FDFLRDTSFNLLQGVCLMS 637
+ T+F +LQ L +
Sbjct: 504 HRDIDATAFGILQAARLRT 522
>gi|393789810|ref|ZP_10377929.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
nordii CL02T12C05]
gi|392650213|gb|EIY43884.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
nordii CL02T12C05]
Length = 614
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 213/558 (38%), Positives = 292/558 (52%), Gaps = 67/558 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGANPIRIQSMTNTSTQDTEACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQELQKIRDRFIPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFKDVVISIKASNTVVMVKTVRLLVALMEKEGMTFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD---------------------- 285
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+ R+ E E +Y R+ + + ++ + L P +L + K V F
Sbjct: 286 YILTRQDHPYIPGIETPEFNYLSPTRRETNAIRNIGGNHL--PVVLADRMDGKTEVNPQF 343
Query: 445 KDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKP------LPHAMV 497
T D I RELP++ + + L D+ G E+ T P LP ++
Sbjct: 344 ----TPDYIYAGRELPAIREANVEYILD--ADVWTG------EEGTWPAFNYSQLP--LM 389
Query: 498 LVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQ 557
+ EL + + ++ L+ ++ E+ I+ + R+
Sbjct: 390 GMCQAELKFLFMPYMAQTDEVIACLK---THPEVVIIS-------------QSNHPNRIG 433
Query: 558 AARRLFEYLSENNLNFPVI--HHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
R L L L PVI H Q + +DL I A ++GAL+ DGL DG+ L
Sbjct: 434 EHRALVHQLMSEGLKNPVIFFQHYQEEDA---EDLQIKAAADMGALIFDGLCDGIFLFNQ 490
Query: 616 GQDFDFLRD-TSFNLLQG 632
G + D T+F +LQ
Sbjct: 491 GLLPHAIVDATAFGILQA 508
>gi|340350226|ref|ZP_08673225.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
nigrescens ATCC 33563]
gi|339609138|gb|EGQ14014.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
nigrescens ATCC 33563]
Length = 640
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 212/565 (37%), Positives = 302/565 (53%), Gaps = 58/565 (10%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ VG + +G ++P+R+Q+MTT DT D +V + RI G +LVR+T QGKRE
Sbjct: 9 RRKSSVTHVGALDMGGDNPVRIQSMTTTDTNDTEASVAQAKRIIAAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + PL AD+HF +VA A +K+R+NPGN+ D F+ LEY
Sbjct: 69 AENLRHINAQLRSEGITTPLCADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKILEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KEL+ IEE +P + CK+ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 129 TDEEYAKELKKIEERLTPFINICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI +K DF++ + S+KASN VVMV++ RLLVAEM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFKKHDFNDVVISIKASNTVVMVRSVRLLVAEMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG--VAPFEE-KH 381
KSA+GIG LL DG+GDTIRVSL+E PE EI + LA R ++G + P E K
Sbjct: 249 KSAVGIGALLNDGIGDTIRVSLSEEPECEIPVAKYLA----RYIRQKKGHIIVPAETFKG 304
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK--SLAAKLV 439
Y +RR + G+ V H D + + + +L AP+ +Y +L AKL
Sbjct: 305 FDYLRPERRKTKAVENIGGDNVPIVIATH-DAAEHNADIVSKLPAPDYIYTKDTLPAKLK 363
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLV 499
G + + D++A + L ++ + P+ P
Sbjct: 364 DGQRY----------------IIDYNAYIELAAKGELPTENVFPIFPTPAIPF------- 400
Query: 500 NLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAA 559
+ T K+ + +V G S E L LK +++ + +++K+
Sbjct: 401 ----IGTVKSKI-----KFLVVKYGTPSEELLACLK-YHPEVVIVCVSSHQNKLAE---Q 447
Query: 560 RRLFEYLSENNLNFPVIHHIQFPNGIHRDD-----------LVIGAGTNVGALLVDGLGD 608
R L + + PV+ + + +D+ + A ++GAL++DGL D
Sbjct: 448 RALVHQMMIAGVENPVVFAQMYQFSVDKDNNNTNEPTAKEQFQLSAAADMGALMIDGLTD 507
Query: 609 GLLLEAPGQ-DFDFLRDTSFNLLQG 632
GL L G D + T+F +LQ
Sbjct: 508 GLWLMNNGNIPQDDVEQTAFGILQA 532
>gi|198277457|ref|ZP_03209988.1| hypothetical protein BACPLE_03679 [Bacteroides plebeius DSM 17135]
gi|198269955|gb|EDY94225.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
plebeius DSM 17135]
Length = 613
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 210/554 (37%), Positives = 291/554 (52%), Gaps = 58/554 (10%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+ V VG +G +PIR+Q+MT T D VE+ RI + G + VR+T QG RE
Sbjct: 8 RRQANEVYVGATPMGGAYPIRIQSMTNTVTMDTEACVEQAKRIIEAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I SL + Y PLVAD+HF P VA A +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLQHINASLRAQGYQTPLVADVHFNPKVAEVAALYAEKVRINPGNYVDAARTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KE+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAKEIQKIRDRFIPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F N + S+KASN V+MV+ RLLV +M +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEQNFMNVVISIKASNTVIMVRTVRLLVEQMEKENMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L + ++ E H +
Sbjct: 248 KSALGIGALLCDGLGDTIRVSLSEAPEAEIPVARKLVDYVLK-----------REGHPY- 295
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+P E E +Y R+ + ++ DQL P ++ L L V F
Sbjct: 296 ---------IP-ATEAPEFNYTHPSRRETVAVGNIGGDQL--PVVISARLNNDLEVSEQF 343
Query: 445 KDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
K D + + LP + R + +VD + T P + L+ L
Sbjct: 344 KP----DYLYCGQRLPE----NCRTDIGYIVD----ACAWDGSEHTYPAFNYQQLIELHH 391
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHD---LPFNEDKIGRVQAAR 560
P + + + SY L + +++ A + LH + + R+ R
Sbjct: 392 --------HPAKMKFLFT-----SY--LGLNEEVMACLRLHPEVVIVAQSNHYNRLGEFR 436
Query: 561 RLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFD 620
L L L P++ Q +DL I + ++GAL++DGL DG+LL G
Sbjct: 437 ALAHQLMNQGLKNPLV-FFQLYQETETEDLQIKSAADMGALIIDGLCDGILLYNHGNQIS 495
Query: 621 FLR--DTSFNLLQG 632
L+ +T+F +LQ
Sbjct: 496 NLKVDETAFGILQA 509
>gi|445113074|ref|ZP_21377400.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
nigrescens F0103]
gi|444841257|gb|ELX68274.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
nigrescens F0103]
Length = 640
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 211/565 (37%), Positives = 301/565 (53%), Gaps = 58/565 (10%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ VG + +G ++P+R+Q+MTT DT D +V + RI G +LVR+T QGKRE
Sbjct: 9 RRKSSVTHVGALDMGGDNPVRIQSMTTTDTNDTEASVAQAKRIIAAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + PL AD+HF +VA A +K+R+NPGN+ D F+ LEY
Sbjct: 69 AENLKHINAQLRSEGITTPLCADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKILEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KEL+ IEE +P + CK+ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 129 TDEEYAKELKKIEERLTPFINICKESHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI +K DF++ + S+KASN VVMV++ RLLVAEM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFKKHDFNDVVISIKASNTVVMVRSVRLLVAEMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG--VAPFEE-KH 381
KSA+GIG LL DG+GDTIRVSL+E PE EI + L R ++G + P E K
Sbjct: 249 KSAVGIGALLNDGIGDTIRVSLSEEPECEIPVAKYLT----RYIRQKKGHIIVPAETFKG 304
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYK--SLAAKLV 439
Y +RR + G+ V H D + + + +L AP+ +Y +L AKL
Sbjct: 305 FDYLRPERRKTKAVENIGGDNVPIVIATH-DAAEHNADIVSKLPAPDYIYTKDTLPAKLK 363
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLV 499
G + + D++A + L ++ + P+ P
Sbjct: 364 DGQRY----------------IIDYNAYIELAAKGELPTENVFPIFPTPAIPF------- 400
Query: 500 NLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAA 559
+ T K+ + +V G S E L LK +++ + +++K+
Sbjct: 401 ----IGTVKSKI-----KFLVVKYGTPSEELLACLK-YHPEVVIVCVSSHQNKLAE---Q 447
Query: 560 RRLFEYLSENNLNFPVIHHIQFPNGIHRDD-----------LVIGAGTNVGALLVDGLGD 608
R L + + PV+ + + +D+ + A ++GAL++DGL D
Sbjct: 448 RALVHQMMIAGVENPVVFAQMYQFSVDKDNNNTNEPTAKEQFQLSAAADMGALMIDGLTD 507
Query: 609 GLLLEAPGQ-DFDFLRDTSFNLLQG 632
GL L G D + T+F +LQ
Sbjct: 508 GLWLMNNGNIPQDDVEQTAFGILQA 532
>gi|333376794|ref|ZP_08468530.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dysgonomonas
mossii DSM 22836]
gi|332886007|gb|EGK06251.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dysgonomonas
mossii DSM 22836]
Length = 615
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 206/537 (38%), Positives = 287/537 (53%), Gaps = 58/537 (10%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + +GN +G +PIRVQ+MT +T D + E+V+RI + GAD VR+T QG RE
Sbjct: 8 RRLSSETRIGNTPLGGNNPIRVQSMTNTNTNDTEASAEQVIRIVEAGADYVRLTAQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD IK + + YN PL+ADIHF P A A+ +K+R+NPGNF DR FE EY
Sbjct: 68 ADNLKNIKEVVRGRGYNTPLIADIHFNPRAAEAAAKVVEKVRINPGNFVDRVKTFETFEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+ I PL++ CK++ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIDKIRAKLVPLLDICKEHKTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F IC + F + SMK SN VVM +A RLL+A M G ++PLHLGVTEAG+GEDGR+
Sbjct: 188 FLHICLEERFKDIAISMKTSNTVVMSKAVRLLIARMEKEGLNFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG+LL DG+GDTIRVSL+E PE E+ R+L + + VA +K
Sbjct: 248 KSAVGIGSLLSDGIGDTIRVSLSEDPEYEVPVARKLIAYIKQKENHPEIVATASDKFSP- 306
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
F RR + G+ V V+ D S + L+ P+ LY + +L + P
Sbjct: 307 FSTDRRETYVVRNIGGDSVP---VVISDRS-QGNFELNSHFLPDYLY--VGKELPIAAP- 359
Query: 445 KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQEL 504
R +PS+ D + E+ T PL + E
Sbjct: 360 -----------RAIPSIIDFEGWKG----------------EKNTYPLFDKSNWNKISET 392
Query: 505 STGAYKLLPEGTRLVVSLRGDESYEELE-----ILKDIDATMILHDLPFNEDKIGRVQAA 559
+ A K L RL SY EL+ +LK+ + +++ + D I V
Sbjct: 393 DS-AIKFL----RL--------SYPELDKDILALLKNDKSIVVI----LSTDHINGVGEQ 435
Query: 560 RRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPG 616
R L N+ + PV+ + ++ +D+ I A + G L +DG G+G++L+ G
Sbjct: 436 RAFIHALMNNDCDTPVVLNRRYTEN-ESEDIQIKAAADFGTLYLDGFGNGIMLQNEG 491
>gi|254444508|ref|ZP_05057984.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Verrucomicrobiae bacterium DG1235]
gi|198258816|gb|EDY83124.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Verrucomicrobiae bacterium DG1235]
Length = 678
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/317 (53%), Positives = 221/317 (69%), Gaps = 3/317 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
YC S T RR +R V+VG+V +G ++PIR+Q+MTT T+DV TV++ + +A+ G ++V
Sbjct: 4 YCVSRFATQRRVSREVLVGSVGVGGDNPIRIQSMTTTLTQDVVATVKQSIALAESGCEIV 63
Query: 136 RITVQGKREADACFEIKNSLVQKNYN-IPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194
R+T K A A +I+ ++ IPLVADIHF P+ A+ E +K+RVNPGN+AD
Sbjct: 64 RVTAPNKPAARALKDIRAQFSAAGFSHIPLVADIHFLPNAAMEAVEHVEKVRVNPGNYAD 123
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254
+ +F LEYTD EY ELQ + E FSPLV++ K+ GR++RIGTNHGSLSDRIM+ YGD+
Sbjct: 124 NK-KFAVLEYTDSEYNAELQRLYESFSPLVKRAKELGRSLRIGTNHGSLSDRIMNRYGDT 182
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P GMVESA EF RI + F++ + SMKASNP VM++AYRLLV M YPLHLGVT
Sbjct: 183 PLGMVESALEFLRIAQSHGFYDMILSMKASNPKVMIEAYRLLVQHMDKEDMAYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG+GEDGR+KSAIGIG+LL DGLGDTIRVSLTE P EI + +AN M + +
Sbjct: 243 EAGDGEDGRIKSAIGIGSLLMDGLGDTIRVSLTEDPVYEIPVAQAIANKIMARWNIDAHI 302
Query: 375 APFEEKHRHYFDFQRRS 391
P ++ F FQRR+
Sbjct: 303 EPADDS-IDPFHFQRRT 318
>gi|381205834|ref|ZP_09912905.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [SAR324
cluster bacterium JCVI-SC AAA005]
Length = 562
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 145/283 (51%), Positives = 206/283 (72%), Gaps = 1/283 (0%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
++ +RRK+R V +GNV +G + PIR+Q+M T+DT DV +EE+ + G +++R+TV
Sbjct: 1 MNSLIRRKSRVVRIGNVLVGGQEPIRIQSMLTSDTCDVPKVIEEMESLVQAGCEIIRVTV 60
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
+ +A ++I+ + + NIPLVADIHF P +A+ AE +K+R+NPGN+ D++ +F
Sbjct: 61 PNHKSVEALYKIREVMFNRGINIPLVADIHFNPQLAVNAAEIVEKVRINPGNYVDKK-KF 119
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
E +EYT+ +YQ+ELQ +EE PL+++ KKY R +RIGTNHGSLSDR+M+ +GD+P+GM
Sbjct: 120 EIIEYTEVQYQEELQRLEEKLLPLIKQLKKYDRCLRIGTNHGSLSDRVMNRFGDTPQGMA 179
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA EF RI K + + SMKASNP+VM AY+ +V +M + +YPLHLGVTEAG+G
Sbjct: 180 ESAMEFLRILEKHQYFETVISMKASNPIVMRAAYQEIVRKMDLEKMNYPLHLGVTEAGDG 239
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
DGR+KSA+GIG+LL DG+GDTIRVSLTEP EI R + N
Sbjct: 240 IDGRVKSALGIGSLLLDGIGDTIRVSLTEPATSEIPAARSILN 282
>gi|410096505|ref|ZP_11291492.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides goldsteinii CL02T12C30]
gi|409226469|gb|EKN19378.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides goldsteinii CL02T12C30]
Length = 612
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/278 (55%), Positives = 193/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +GN +G E+PIR+Q+M T D +V + +R+ + GA+ VR T QG+RE
Sbjct: 8 RRKSSVVNIGNTPLGGENPIRIQSMANVSTMDTEASVRQAIRMIEAGAEYVRFTAQGERE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A EI+ L + Y PLVADIHF P A AE +K+R+NPGN+ D+ F+ LEY
Sbjct: 68 ARNLGEIRKELNAQGYTTPLVADIHFNPRAADAAAEVVEKVRINPGNYVDKVKTFDLLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P ++ CKK+G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLDICKKHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR +F + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICRDENFPDVVISIKASNTVVMVRTVRLLVRTMEAEDMHYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L N
Sbjct: 248 KSAVGIGALLTDGIGDTIRVSLSEDPEAEIPVARKLVN 285
>gi|424825092|ref|ZP_18250079.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
abortus LLG]
gi|333410191|gb|EGK69178.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
abortus LLG]
Length = 606
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/304 (50%), Positives = 199/304 (65%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ RR T +V +GN+ +GS+H I+ Q+MTT T DV TV ++ + + ++ R+TVQG
Sbjct: 9 QAARRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVAQICALVEARCEIARVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+EA AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKEAQACEHIKERLIALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KIYTDKHYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ +C KL + + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEVCEKLGYRDVVFSMKSSNPKVMVAAYRQLAQDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKH 381
G +KS++GIGTLL +GLGDTIR SLT P +EI C L L + PF ++
Sbjct: 249 GIIKSSVGIGTLLTEGLGDTIRCSLTGCPTQEIPVCESLLKHTTTYLNLPKKNNPFALEN 308
Query: 382 RHYF 385
F
Sbjct: 309 SESF 312
>gi|62185038|ref|YP_219823.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
abortus S26/3]
gi|73621088|sp|Q5L669.1|ISPG_CHLAB RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|62148105|emb|CAH63862.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
[Chlamydophila abortus S26/3]
Length = 606
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/304 (50%), Positives = 199/304 (65%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
+ RR T +V +GN+ +GS+H I+ Q+MTT T DV TV ++ + + ++ R+TVQG
Sbjct: 9 QAARRYTHSVKIGNLYVGSDHSIKTQSMTTTPTADVDATVAQICALVEARCEIARVTVQG 68
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201
+EA AC IK L+ ++PLVADIHF P A+ VA+ DK+R+NPGNF D+R F
Sbjct: 69 IKEAQACEHIKERLIALGIDVPLVADIHFFPQAAMHVADFVDKVRINPGNFVDKRNMFTG 128
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
YTD Y L +EE FSPLVEKCK+ G+A+RIG NHGSLS+R+M YGD+ GMV S
Sbjct: 129 KIYTDKHYADSLLRLEEKFSPLVEKCKRLGKAMRIGVNHGSLSERVMQRYGDTIEGMVVS 188
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ +C KL + + +FSMK+SNP VMV AYR L ++ GW YPLHLGVTEAG G D
Sbjct: 189 ALEYIEVCEKLGYRDVVFSMKSSNPKVMVAAYRQLAKDLDARGWHYPLHLGVTEAGMGMD 248
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKH 381
G +KS++GIGTLL +GLGDTIR SLT P +EI C L L + PF ++
Sbjct: 249 GIIKSSVGIGTLLTEGLGDTIRCSLTGCPTQEIPVCESLLKHTTTYLNLPRKNNPFALEN 308
Query: 382 RHYF 385
F
Sbjct: 309 SESF 312
>gi|384916507|ref|ZP_10016664.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Methylacidiphilum fumariolicum SolV]
gi|384526107|emb|CCG92537.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Methylacidiphilum fumariolicum SolV]
Length = 584
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/319 (50%), Positives = 211/319 (66%), Gaps = 8/319 (2%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y + + RR R V VG+V +G HPI VQ+M T+DT D ++E M + D G +V
Sbjct: 4 YKRNFFEYTRRPVREVRVGSVGLGGPHPIVVQSMLTSDTMDTDSCLKEAMELVDCGCQIV 63
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT ++A I+ L Q N+P+VADIHF P A+ A+ +KIR+NPGNF+DR
Sbjct: 64 RITAPTVKDASNLEFIRKGLDQLGCNVPIVADIHFKPEAAMEAAKWVEKIRINPGNFSDR 123
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F YTD EY +EL+ IE+ F PL+E C K A+RIGTNHGSLSDRIM+ YGD+P
Sbjct: 124 K-KFIIRSYTDQEYNEELRRIEQTFLPLLEFCSKRKIALRIGTNHGSLSDRIMNRYGDTP 182
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG--WDYPLHLGV 313
GMVESA E+A +CRK FH+ +FSMKASNP +M+ AYRLLV + G W+YP+H+GV
Sbjct: 183 HGMVESALEYATVCRKYGFHDIVFSMKASNPRIMIAAYRLLVERLEKLGEDWNYPIHVGV 242
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
TEAG+GEDGR+KSAIGIG+LL DG+GDTIRVSLTE EI ++L + EL
Sbjct: 243 TEAGDGEDGRIKSAIGIGSLLADGIGDTIRVSLTESSVHEIPVAKKLIAV---VEELAAA 299
Query: 374 VAPFEE--KHRHYFDFQRR 390
AP + F++ RR
Sbjct: 300 PAPKVNGFSFKPSFEYNRR 318
>gi|408794092|ref|ZP_11205697.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
meyeri serovar Hardjo str. Went 5]
gi|408461327|gb|EKJ85057.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptospira
meyeri serovar Hardjo str. Went 5]
Length = 661
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/270 (54%), Positives = 203/270 (75%), Gaps = 1/270 (0%)
Query: 92 MVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEI 151
MVG V IG ++PIR+Q+M T++T+D +++++ + G+++VR+TV + +AD I
Sbjct: 1 MVGGVGIGGKNPIRIQSMITSNTRDTEASIKQISDLEKAGSEIVRLTVPSQADADNLPNI 60
Query: 152 KNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQK 211
+ + + +PLVADIHF P VAL+ E +K+R+NPGNFAD++ +FE +EYTD +Y +
Sbjct: 61 RKRMKELGLKVPLVADIHFTPQVALKCVEWVEKVRINPGNFADKK-KFEIIEYTDKDYNE 119
Query: 212 ELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRK 271
EL+ IEEVF+PLV + K+ G A+RIGTNHGSLSDRIM+ +GD+P GMVESA EF RI +
Sbjct: 120 ELERIEEVFTPLVLRAKELGVAMRIGTNHGSLSDRIMNRFGDTPLGMVESALEFIRIAER 179
Query: 272 LDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIG 331
+ + + SMKASNP VM+QAYR+LV+ Y G DYPLHLGVTEAG+G+DGR+KS+IGIG
Sbjct: 180 NSYRDIVVSMKASNPQVMIQAYRMLVSRFYDLGMDYPLHLGVTEAGDGKDGRIKSSIGIG 239
Query: 332 TLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
+LL+DGLGDTIRVSLTE EI + L
Sbjct: 240 SLLEDGLGDTIRVSLTEDAIHEIPVAKELV 269
>gi|373849717|ref|ZP_09592518.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Opitutaceae
bacterium TAV5]
gi|372475882|gb|EHP35891.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Opitutaceae
bacterium TAV5]
Length = 738
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/316 (54%), Positives = 220/316 (69%), Gaps = 15/316 (4%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGS------EHPIRVQTMTTNDTKDVAGTVEEVMRIA 128
+YC S + T+RR+T V VG+V IG ++P+R+Q+MTT DT+DVA TV + + +A
Sbjct: 2 RYCPSRYHTLRRETVEVQVGSVGIGGPGGIVGKNPVRIQSMTTTDTQDVAATVRQSIALA 61
Query: 129 DQGADLVRITVQGKREADACFEIKNSLVQKNY-NIPLVADIHFAPSVALRVAECFDKIRV 187
+ G ++VR+T A A +I+ L + +IPLVADIHF PS A+ E +K+RV
Sbjct: 62 EVGCEIVRVTAPNVTAARALRDIRQQLTAAGFGHIPLVADIHFLPSAAMEAVEHVEKVRV 121
Query: 188 NPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI 247
NPGN+AD++ +F EY+D +Y++ELQ I + F+PLV + K GRA+RIGTNHGSLSDRI
Sbjct: 122 NPGNYADKK-KFAVTEYSDADYERELQRIYDAFTPLVLRAKALGRALRIGTNHGSLSDRI 180
Query: 248 MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
M+ YGD+P GMVESA EF RIC +F + + SMKASNP VM+QAYRLLVA M Y
Sbjct: 181 MNRYGDTPLGMVESALEFLRICESHNFRDIVLSMKASNPKVMIQAYRLLVARMDQEDMHY 240
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRA 367
PLHLGVTEAG+GEDGR+KSAIGIG+LL DGLGDTIRVSLTE EI ++LA +A
Sbjct: 241 PLHLGVTEAGDGEDGRIKSAIGIGSLLYDGLGDTIRVSLTEDSVYEIPVAQKLA---AKA 297
Query: 368 AELQQ----GVAPFEE 379
L Q GV P E
Sbjct: 298 HALWQQGGAGVPPASE 313
>gi|187735881|ref|YP_001877993.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Akkermansia muciniphila ATCC BAA-835]
gi|238054454|sp|B2UKT9.1|ISPG_AKKM8 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|187425933|gb|ACD05212.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Akkermansia muciniphila ATCC BAA-835]
Length = 585
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/326 (50%), Positives = 224/326 (68%), Gaps = 6/326 (1%)
Query: 73 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGA 132
+ YC S ++ RR TR VMVGNV +G +PIR+Q+M T+DT+D V+E + +A+ G
Sbjct: 2 QSSYCPSPYRYTRRVTREVMVGNVGVGGSNPIRIQSMLTSDTRDTDACVKEALELAEAGC 61
Query: 133 DLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNF 192
+++R+T Q K A I L ++PLVADIHF P A+ A+ +KIR+NPGNF
Sbjct: 62 EIIRLTAQTKAYAANLENIARELRAAGCHVPLVADIHFKPDAAMEAAKWVEKIRINPGNF 121
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
D++ +FE EY+D EY++EL ++E F+PLV C+++GRA+RIG+NHGSLSDRI++ +G
Sbjct: 122 VDKK-KFEVREYSDAEYREELDRLKEEFTPLVLFCREHGRAMRIGSNHGSLSDRILNRFG 180
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG--WDYPLH 310
D+P GMVESA EFA+I R LD+H+ +FSMKASN VMV AYRLLV M G W+YP+H
Sbjct: 181 DTPEGMVESAIEFAQIARDLDYHSLVFSMKASNVKVMVAAYRLLVERMNALGPDWNYPIH 240
Query: 311 LGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAEL 370
LGVTEAG GEDGR+KSA+GIG+LL DG+GDT+RVSLTE +E+ RL+N + +E
Sbjct: 241 LGVTEAGGGEDGRIKSAVGIGSLLTDGIGDTLRVSLTEDAVREVPVAYRLSN-PFQPSER 299
Query: 371 QQGVAPFEEKHRHY--FDFQRRSGQL 394
F E Y F +R G L
Sbjct: 300 SDDPVSFPEPELSYDPLKFSKRQGGL 325
>gi|333029633|ref|ZP_08457694.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
coprosuis DSM 18011]
gi|332740230|gb|EGJ70712.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
coprosuis DSM 18011]
Length = 615
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 194/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + V +G + +G +PIR+Q+MT T+D +V ++ RI D GAD VR+T QG +E
Sbjct: 8 RRGSSEVQIGAIPLGKNNPIRIQSMTNTSTQDTDTSVAQIKRIVDAGADYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A EI +L + NY +PLVAD+HF P VA AE +K+R+NPGN+ D QF+ L Y
Sbjct: 68 ATNLKEINIALRRSNYMVPLVADVHFNPKVADVAAEFAEKVRINPGNYVDPARQFKSLSY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY EL+ I + + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYNSELEKIRTRLTSFINICKENHTAIRIGVNHGSLSDRIMSHYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR +F N + S+KASN V+MVQ RLLVA + +PLHLGVTEAGEGEDGR+
Sbjct: 188 FLRICRDENFLNVVISIKASNTVIMVQTIRLLVATLEKENMFFPLHLGVTEAGEGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PEKEI ++L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEKEIPVAQKLVD 285
>gi|423227027|ref|ZP_17213491.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
cellulosilyticus CL02T12C19]
gi|392625493|gb|EIY19558.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
cellulosilyticus CL02T12C19]
Length = 613
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/282 (54%), Positives = 193/282 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D +V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGATPMGGSNPIRIQSMTNTATQDTEASVAQAKRIVDAGGEYVRLTAQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLMNINAGLRRDGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQELQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC K DF + + S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVKEDFTDVVISIKASNTVVMVKTVRLLAAVMEKEGMQFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMR 366
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L + M+
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEAEIPVARKLVDYIMQ 289
>gi|150009758|ref|YP_001304501.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides distasonis ATCC 8503]
gi|256838562|ref|ZP_05544072.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides sp. D13]
gi|423333795|ref|ZP_17311576.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides distasonis CL03T12C09]
gi|166217119|sp|A6LGR5.1|ISPG_PARD8 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|149938182|gb|ABR44879.1| putative GcpE terpenoid biosynthesis protein [Parabacteroides
distasonis ATCC 8503]
gi|256739481|gb|EEU52805.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides sp. D13]
gi|409227105|gb|EKN20007.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides distasonis CL03T12C09]
Length = 611
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 202/549 (36%), Positives = 281/549 (51%), Gaps = 48/549 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ +G+ +G E+PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 8 RRKSSVAQIGDTPMGGENPIRIQSMANVSTMDTEAAVAQAIRMIEAGAEYVRFTAQGERE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A EI+ L ++ Y PLVADIHF P A A +K+R+NPGN+ D+ F LEY
Sbjct: 68 ARNLGEIRKQLNEQGYTTPLVADIHFNPRAADAAAGEVEKVRINPGNYVDKVKTFSHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY E++ I E F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 128 TDEEYAAEIEKIRERFVPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR+ +F + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICREENFPDVVISIKASNTVVMVRTVRLLVRTMEAENMHYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIGTLL DG+GDTIRVSL+E PE E+ R+L + +R E + P E
Sbjct: 248 KSAVGIGTLLCDGIGDTIRVSLSEDPEAEMPVARKLVDY-IRERENHR---PIEASMAPG 303
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
FD S ++ EG + V+ D S D L P+ +Y + + +P
Sbjct: 304 FDTVATSRRISRVVEGIGGTFSPVVISDRSS-GDFEFDYLSLPDYIY--IGKEDPDNLPD 360
Query: 445 KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQEL 504
VD+ +E P+ + + E P + + +L
Sbjct: 361 NFRLLVDAHFWKERPNA--------------FPCFIASEAEELKDYDCPLKFIRLTYMDL 406
Query: 505 STGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFE 564
+ LEILK D T+++ + + +G +AA
Sbjct: 407 TD----------------------RMLEILK-ADKTVVVLLSTHHRNGVGSQRAA---MH 440
Query: 565 YLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRD 624
L + PV+ H F + L + + + G LL+DG GDGL+L G +
Sbjct: 441 KLLMAGCDVPVVLHRDFRE-TDVELLQLKSAADFGTLLLDGFGDGLMLHNEGCEAVVSDR 499
Query: 625 TSFNLLQGV 633
F +LQ
Sbjct: 500 CMFGILQAT 508
>gi|304383567|ref|ZP_07366027.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
marshii DSM 16973]
gi|304335377|gb|EFM01647.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
marshii DSM 16973]
Length = 620
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/295 (52%), Positives = 197/295 (66%), Gaps = 1/295 (0%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RR + +G+ +G +PIRVQ+MTT DT D +V + RIAD G + VR+T QG R
Sbjct: 8 LRRTSSVTCIGDTPMGGAYPIRVQSMTTTDTNDTEASVAQAERIADAGGEYVRLTTQGTR 67
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
EA+ I L Y PL+AD+HF VA A K+R+NPGN+ D F+ L+
Sbjct: 68 EAENLKAIGMRLRADGYATPLIADVHFNARVADVAAHYAQKVRINPGNYVDPARTFKTLD 127
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+EY KE++ IE+ F P + CK++ AVRIG NHGSLSDRIMS YGD+P G+VES
Sbjct: 128 YTDEEYAKEIEKIEQRFVPFLHICKEHHTAVRIGVNHGSLSDRIMSRYGDTPAGIVESCM 187
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC++ F + + S+KASN VVMV++ RLLV+EM G YPLHLGVTEAGEGEDGR
Sbjct: 188 EFLRICKREHFDDVVISIKASNTVVMVRSVRLLVSEMEKEGMHYPLHLGVTEAGEGEDGR 247
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPF 377
+KSA+GIG LL DG+GDTIRVSL+E PE EI RRL + RA PF
Sbjct: 248 IKSAVGIGALLADGIGDTIRVSLSEEPEAEIPVARRLVEYITQRAGHSMIPCEPF 302
>gi|255012949|ref|ZP_05285075.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_7]
gi|262382932|ref|ZP_06076069.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_33B]
gi|298374155|ref|ZP_06984113.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_19]
gi|410102119|ref|ZP_11297046.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides sp. D25]
gi|262295810|gb|EEY83741.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_33B]
gi|298268523|gb|EFI10178.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_19]
gi|409238841|gb|EKN31629.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides sp. D25]
Length = 611
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 202/549 (36%), Positives = 281/549 (51%), Gaps = 48/549 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ +G+ +G E+PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 8 RRKSSVAQIGDTPMGGENPIRIQSMANVSTMDTEAAVAQAIRMIEAGAEYVRFTAQGERE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A EI+ L ++ Y PLVADIHF P A A +K+R+NPGN+ D+ F LEY
Sbjct: 68 ARNLGEIRKQLNEQGYTTPLVADIHFNPRAADAAAGEVEKVRINPGNYVDKVKTFSHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY E++ I E F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 128 TDEEYAAEIERIRERFVPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR+ +F + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICREENFPDVVISIKASNTVVMVRTVRLLVRTMEAENMHYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIGTLL DG+GDTIRVSL+E PE E+ R+L + +R E + P E
Sbjct: 248 KSAVGIGTLLCDGIGDTIRVSLSEDPEAEMPVARKLVDY-IRERENHR---PIEASMAPG 303
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
FD S ++ EG + V+ D S D L P+ +Y + + +P
Sbjct: 304 FDTVATSRRISRVVEGIGGTFSPVVISDRSS-GDFEFDYLSLPDYIY--IGKEDPDNLPD 360
Query: 445 KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQEL 504
VD+ +E P+ + + E P + + +L
Sbjct: 361 NFRLLVDAHFWKERPNA--------------FPCFIASEAEELKDYDCPLKFIRLTYMDL 406
Query: 505 STGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFE 564
+ LEILK D T+++ + + +G +AA
Sbjct: 407 TD----------------------RMLEILK-ADKTVVVLLSTHHRNGVGSQRAA---MH 440
Query: 565 YLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRD 624
L + PV+ H F + L + + + G LL+DG GDGL+L G +
Sbjct: 441 KLLMAGCDVPVVLHRDFRE-TDVELLQLKSAADFGTLLLDGFGDGLMLHNEGCEAVVSDR 499
Query: 625 TSFNLLQGV 633
F +LQ
Sbjct: 500 CMFGILQAT 508
>gi|345884841|ref|ZP_08836241.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. C561]
gi|345042340|gb|EGW46441.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. C561]
Length = 646
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 215/564 (38%), Positives = 293/564 (51%), Gaps = 49/564 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+RVQ+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGALNIGGENPVRVQSMTTTSTDDTDGSVAQAKRIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L NY PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADNYMAPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELQKIEDRLIPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DFH+ + S+K+SN VVMV++ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKYDFHDIVISIKSSNTVVMVRSVRLLVAEMDKEGMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI P + +R E + + Y
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEI-PVAKYLTWYLRRHEKHLLIPAEQYADFDY 307
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG-MP 443
RR GE V + VS +L P+ +Y V G +P
Sbjct: 308 LHPNRRETVAAGNIGGENVPVVIATRKADQATAEVSSPELPKPDYIY-------VQGELP 360
Query: 444 FKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
K IL D+DA L L S+ + P+ P A
Sbjct: 361 EKRAKKQKYIL--------DYDAYLDLANSGKQSLENVYPIFPVTGMPFISA-------- 404
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA-ARRL 562
+ + +V G S E L LK +++ + +++++G +A A +L
Sbjct: 405 --------INSDVKFLVLKFGTPSEEFLACLKTHPEVVVVC-MTSHQNRLGDQRALAHQL 455
Query: 563 FEYLSENNLNFPVIHH-------------IQFPNGIHRDDLVIGAGTNVGALLVDGLGDG 609
+N + F ++ Q ++ + A ++GAL++DGL DG
Sbjct: 456 MIAGVKNPIIFAQMYQHSTTEEKEESSNSQQAETTTAKEKFQLEAAADMGALMMDGLTDG 515
Query: 610 LLLEAPGQ-DFDFLRDTSFNLLQG 632
+ L G + + T+F +LQ
Sbjct: 516 IWLMNNGNLSQEDVEQTAFGILQA 539
>gi|189219979|ref|YP_001940619.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
[Methylacidiphilum infernorum V4]
gi|189186837|gb|ACD84022.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
[Methylacidiphilum infernorum V4]
Length = 606
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/294 (52%), Positives = 206/294 (70%), Gaps = 6/294 (2%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+ R V VG V +G +P+ +Q+M T+DT D ++E + + + G +VRIT ++
Sbjct: 35 RRQAREVAVGKVKLGGGNPVAIQSMLTSDTMDTTACLKETLELVESGCQIVRITAPTVKD 94
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I+ L + ++PLVADIHF P A+ A +K+R+NPGNFADR+ +F Y
Sbjct: 95 ASNLEFIRRGLNDRGCDVPLVADIHFKPEAAMEAARWVEKVRINPGNFADRK-KFIIRSY 153
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ F PLVE C+K A+RIGTNHGSLSDRIM+ +GD+P+GMVESA E
Sbjct: 154 TDEEYNQELQRIEQAFLPLVELCRKRKIALRIGTNHGSLSDRIMNRFGDTPQGMVESALE 213
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHG--WDYPLHLGVTEAGEGEDG 322
+A +CRK DFH+F+FSMKASNP +M+ AYR L+ + G W+YP+H+GVTEAG+GEDG
Sbjct: 214 YAAVCRKHDFHDFVFSMKASNPRIMISAYRKLIQTLERLGEDWNYPVHVGVTEAGDGEDG 273
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAP 376
R+KSAIGIG+LL DG+GDTIRVSLTE EI +L ++ EL Q +P
Sbjct: 274 RIKSAIGIGSLLADGIGDTIRVSLTEKSVYEIPVAAKLLSV---VDELAQAPSP 324
>gi|182416438|ref|YP_001821504.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Opitutus
terrae PB90-1]
gi|177843652|gb|ACB77904.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Opitutus
terrae PB90-1]
Length = 677
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 204/292 (69%), Gaps = 2/292 (0%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
YC S TVRR++ V VG+V +G ++PIR+Q+MTT+DT+DVA TV + + +A+ G ++
Sbjct: 2 SYCSSRFHTVRRRSLEVKVGSVGVGGDNPIRIQSMTTSDTQDVAATVAQAIALAEVGCEI 61
Query: 135 VRITVQGKREADACFEIKNSLVQKNYN-IPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
VR+T A EI+ + +PLVADIHF P+ A+ E +K+RVNPGN+A
Sbjct: 62 VRVTAPNIAAAQCLKEIRERFTAAGFGAVPLVADIHFLPAAAMEAIEHVEKVRVNPGNYA 121
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
D++ +F EYTD +Y++ELQ + E FSPLV + K GR++RIGTNHGSLSDRIM+ YGD
Sbjct: 122 DKK-KFAVREYTDTDYERELQRLHETFSPLVLRAKALGRSLRIGTNHGSLSDRIMNRYGD 180
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P GMVESA EF RI F + SMKASNP VM+QAYRLLV M YPLHLGV
Sbjct: 181 TPLGMVESALEFLRIAESHGFDQLILSMKASNPKVMIQAYRLLVERMQQEAMHYPLHLGV 240
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGM 365
TEAG+GEDGR+KSAIGIG+LL DGLGDTIRVSLTE EI + LA M
Sbjct: 241 TEAGDGEDGRIKSAIGIGSLLLDGLGDTIRVSLTEDSVYEIPVAQVLAAKAM 292
>gi|282881277|ref|ZP_06289963.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
timonensis CRIS 5C-B1]
gi|281304867|gb|EFA96941.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
timonensis CRIS 5C-B1]
Length = 605
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 159/308 (51%), Positives = 207/308 (67%), Gaps = 5/308 (1%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ V VGN+ IG + PIR+Q+MTT DT D VE+ RI G +LVR+T QG+RE
Sbjct: 9 RRESSVVHVGNITIGGDSPIRIQSMTTTDTNDTEACVEQAERIIQAGGELVRLTTQGRRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L K ++ PLVAD+HF +VA AE +K+R+NPGN+ D +F Q+ Y
Sbjct: 69 AENLKNIHAALRAKGHHTPLVADVHFNANVADVAAEYTEKVRINPGNYVDPARKFIQIAY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IE+ F P + CK A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELKKIEDRFVPFLNICKANHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K F + + S+K+SN +VMVQ+ RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKKEQFEDVVISIKSSNTIVMVQSVRLLVDAMDKEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEE-KHR 382
KSA+GIG LL DG+GDTIRVSL+E PE EI + + N + RA L + P E+ K+
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEIPVAKHIVNYITKRAGHL---LIPAEQNKNF 305
Query: 383 HYFDFQRR 390
Y RR
Sbjct: 306 SYLHPTRR 313
>gi|374386312|ref|ZP_09643812.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Odoribacter
laneus YIT 12061]
gi|373224241|gb|EHP46581.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Odoribacter
laneus YIT 12061]
Length = 619
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/280 (52%), Positives = 200/280 (71%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RR+T V +G V + SE P+ VQ+M T D VE+ +RI + G LVRIT G +
Sbjct: 1 MRRETIAVQIGEVVLSSEQPVLVQSMLNTSTLDTEACVEQSIRIIEAGGQLVRITAPGVK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
EA+ I++ L +++Y +PL ADIHF+P+ AL A +K+R+NPGNF D+RA F+ L
Sbjct: 61 EAENLKNIRDILRERSYTVPLSADIHFSPAAALVAARYVEKVRINPGNFVDKRATFQNLV 120
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT++EY ELQ ++ F+ +++C+++ AVRIGTNHGSLSDRIMS YG++P GMVE+
Sbjct: 121 YTEEEYAAELQQLKCKFTEFLDECRRHHTAVRIGTNHGSLSDRIMSRYGNTPAGMVEATM 180
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
E+ RIC+++ F + S+K+S+ +MV+A RLLV EM G YPLHLGVTEAGEGEDGR
Sbjct: 181 EYLRICQEIGFDQVVISLKSSDCRIMVEAVRLLVKEMEKAGMKYPLHLGVTEAGEGEDGR 240
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANL 363
++SA+GIG LL +G+GDTIRVSLTE PE+EI R L L
Sbjct: 241 IRSAVGIGCLLNEGIGDTIRVSLTEAPEQEIPVARTLIGL 280
>gi|333384022|ref|ZP_08475667.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dysgonomonas
gadei ATCC BAA-286]
gi|332826980|gb|EGJ99774.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dysgonomonas
gadei ATCC BAA-286]
Length = 615
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 145/276 (52%), Positives = 191/276 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + +G+ +G +P+R+Q+MT +T D + E+V+RI GAD VR+T QG RE
Sbjct: 8 RRLSSETRIGDTPLGGGNPVRIQSMTNTNTNDTEASAEQVIRIVKAGADYVRLTAQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ IK+ + + YN PL+ADIHF P A A+ +K+R+NPGNF DR FE EY
Sbjct: 68 AENLRNIKDVVRTQGYNTPLIADIHFNPRAAEAAAKIVEKVRINPGNFVDRVKTFETFEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I PL+ CK++ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRAKLIPLLNICKEHKTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F IC +F + + SMK SN VVM +A RLL+ M G ++PLHLGVTEAG+GEDGR+
Sbjct: 188 FLHICIAEEFRDIVISMKTSNTVVMSKAVRLLITRMEKEGLNFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+GIG+LL DG+GDTIRVSL+E PE E+ R+L
Sbjct: 248 KSAVGIGSLLSDGIGDTIRVSLSEDPEYEVPVARKL 283
>gi|423251911|ref|ZP_17232919.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL03T00C08]
gi|423252775|ref|ZP_17233706.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL03T12C07]
gi|392648787|gb|EIY42474.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL03T00C08]
gi|392659538|gb|EIY53157.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL03T12C07]
Length = 626
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 153/278 (55%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I SL Y +PLVAD+HF+P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINISLRSTGYMVPLVADVHFSPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285
>gi|387132538|ref|YP_006298510.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
intermedia 17]
gi|386375386|gb|AFJ09090.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
intermedia 17]
Length = 633
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 152/277 (54%), Positives = 196/277 (70%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ VG + +G ++P+R+Q+MTT +T D +V + RI G +LVR+T QGKRE
Sbjct: 9 RRKSSVTHVGALDMGGDNPVRIQSMTTTNTNDTEASVAQAKRIIAAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + PL AD+HF +VA A +K+R+NPGN+ D F+ LEY
Sbjct: 69 AENLKNINAQLRAEGITTPLCADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKVLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KEL+ IE+ +P ++ CK+ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 129 TDEEYAKELKRIEDRLTPFIQICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI +K DF++ + S+KASN VVMV++ RLLVAEM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFKKHDFNDIVISIKASNTVVMVRSVRLLVAEMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
KSA+GIG LL DG+GDTIRVSL+E PE EI + LA
Sbjct: 249 KSAVGIGALLNDGIGDTIRVSLSEEPECEIPVAKYLA 285
>gi|281421662|ref|ZP_06252661.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
copri DSM 18205]
gi|281404296|gb|EFB34976.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
copri DSM 18205]
Length = 635
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 200/562 (35%), Positives = 298/562 (53%), Gaps = 63/562 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + +G + +G ++PIR+Q+MTT +T D V++ I G +LVR T QG RE
Sbjct: 22 RRASSVAHIGAIDLGGDNPIRIQSMTTTNTNDTEACVQQAEEIIKAGGELVRFTTQGSRE 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I + Y PLVAD+HF P+VA A +K+RVNPGN+ D +F + EY
Sbjct: 82 AENMKNINAGIRADGYQTPLVADVHFNPNVADVAALYCEKVRVNPGNYVDPARKFIKQEY 141
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ IE+ F P + CK++ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 142 TDEEYAHELQKIEDRFVPFLNICKEHHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCLE 201
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K FH+ + S+K+SN VVMV++ RLLV EM G +YPLHLGVTEAGEGEDGR+
Sbjct: 202 FLRICKKEKFHDVVISIKSSNTVVMVRSMRLLVEEMEKEGMNYPLHLGVTEAGEGEDGRI 261
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRH 383
KSA+GIG LL DG+GDT+RVSL+E P EI R L + +G + L A
Sbjct: 262 KSAVGIGALLADGIGDTVRVSLSEEPAAEIPVARHLVDYIGKKKGHLMIPAAACPS---- 317
Query: 384 YFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMS--------VSLDQLKAPELLYKSLA 435
FD+ R P ++E V G H V++S + ++ P+ +Y +
Sbjct: 318 -FDWLR-----PTRRETVAVGNIGGSHV--PVVISNRINGESTICENKDATPDYIY--IG 367
Query: 436 AKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHA 495
K MP + +A I+ D++ L + + + P+ + PL +
Sbjct: 368 GK----MPKQFVAGQSYII--------DYNVYETLNSKPETTGAKLYPIFPAMAMPLIAS 415
Query: 496 MVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGR 555
+ + + G + E + LK +++ + +++++G
Sbjct: 416 ----------------IKADVKFLTLQFGTPAEEYIACLKAHPEVVVIC-VSNHQNRLGD 458
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGI-HRDDLVIGAGTNVGALLVDGLGDGLLL-- 612
+A L + L PV+ + +G + D + A ++GAL++DGL DG+ L
Sbjct: 459 QRA---LVHEMMNAGLKNPVVFAEMYQHGKEEKSDFQLEAAADMGALMIDGLTDGIWLMN 515
Query: 613 --EAPGQDFDFLRDTSFNLLQG 632
+ P Q D +T+F +LQ
Sbjct: 516 NGDIPAQTID---ETAFGILQA 534
>gi|317478389|ref|ZP_07937552.1| GcpE protein [Bacteroides sp. 4_1_36]
gi|316905425|gb|EFV27216.1| GcpE protein [Bacteroides sp. 4_1_36]
Length = 622
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D +V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGATPMGGSNPIRIQSMTNTATQDTEASVAQTKRIVDAGGEYVRLTAQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Q Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLMNINIGLRQDGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQELQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVQENFTDVVISIKASNTVVMVKTVRLLAAVMEQEGMRFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|423304743|ref|ZP_17282742.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
uniformis CL03T00C23]
gi|423310143|ref|ZP_17288127.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
uniformis CL03T12C37]
gi|392682783|gb|EIY76125.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
uniformis CL03T12C37]
gi|392683407|gb|EIY76742.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
uniformis CL03T00C23]
Length = 621
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D +V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGATPMGGSNPIRIQSMTNTATQDTEASVAQAKRIVDAGGEYVRLTAQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Q Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLMNINIGLRQDGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQELQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVQENFTDVVISIKASNTVVMVKTVRLLAAVMEQEGMRFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|429725762|ref|ZP_19260579.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 473 str. F0040]
gi|429148899|gb|EKX91895.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 473 str. F0040]
Length = 622
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 207/305 (67%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
R + V VGN IG +P+R+Q+MTT T D +VE+ +RI + GADLVR+T QG REA
Sbjct: 9 RSSHAVKVGNTIIGDGNPLRLQSMTTTLTTDTEASVEQCIRIIEAGADLVRLTTQGLREA 68
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYT 205
+ I+ L ++ Y+ PLVAD+HF P VA A +K+R+NPGN+ D F+ +EYT
Sbjct: 69 ENLRNIRAELDRRGYHTPLVADVHFNPKVADLAATIIEKVRINPGNYVDPARTFKSVEYT 128
Query: 206 DDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 265
D+EY ELQ +E F L+E C++ G A+RIG NHGSLSDRIM +YGD+P G+VES EF
Sbjct: 129 DEEYAAELQRLETRFKKLLEICRENGTAIRIGVNHGSLSDRIMCHYGDTPAGIVESCMEF 188
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
RIC + +F + + S+KASN VVMVQ+ RLLV M G +PLHLGVTEAGEGEDGR+K
Sbjct: 189 LRICMRENFFDVVISIKASNTVVMVQSMRLLVDAMKREGMSFPLHLGVTEAGEGEDGRIK 248
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHYF 385
SA+GIG LL DG+GDTIRVSL+E PE+EI +LA+ + + + ++
Sbjct: 249 SAVGIGALLADGIGDTIRVSLSEAPEQEIPVAYKLASYVLESRSGHAHIPALPCAEFNWL 308
Query: 386 DFQRR 390
+ QRR
Sbjct: 309 EPQRR 313
>gi|357060766|ref|ZP_09121530.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alloprevotella rava F0323]
gi|355375599|gb|EHG22882.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alloprevotella rava F0323]
Length = 632
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/283 (54%), Positives = 195/283 (68%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
R++ V VGN +G ++PIR+Q+MTT T D G V ++ I G D VR+T QG REA
Sbjct: 22 RESHEVSVGNKPLGGDNPIRLQSMTTAATTDTEGCVRQIKAIVGAGGDYVRLTTQGTREA 81
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYT 205
+ IK+ L + Y PLVADIHF P+VA A +K+R+NPGN+ D F LEYT
Sbjct: 82 ENLRNIKDELTRLGYTTPLVADIHFNPNVADVAATIVEKVRINPGNYIDPARTFRHLEYT 141
Query: 206 DDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 265
D+EY EL+ +E F L++ C+ A+RIG NHGSLSDRIMS YGD+P G+VES EF
Sbjct: 142 DEEYADELKRLEARFHQLLDICRANHTAIRIGVNHGSLSDRIMSRYGDTPEGIVESCMEF 201
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+C+K DF + + S+KASN VVMV++ RLL + M G D+PLHLGVTEAGEGEDGR+K
Sbjct: 202 LRVCQKEDFKDVVISIKASNTVVMVRSMRLLCSIMQAEGMDFPLHLGVTEAGEGEDGRIK 261
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAA 368
SA GIG LL DG+GDTIRVSL+E PE EI +LA+ +R A
Sbjct: 262 SAAGIGALLADGIGDTIRVSLSEAPENEIPVAYKLASHVVRRA 304
>gi|423342558|ref|ZP_17320272.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides johnsonii CL02T12C29]
gi|409217475|gb|EKN10451.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides johnsonii CL02T12C29]
Length = 612
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 200/552 (36%), Positives = 282/552 (51%), Gaps = 54/552 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +GN +G ++PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 9 RRKSSIVNIGNTPLGGDNPIRIQSMANVSTMDTDAAVHQAIRMIEAGAEYVRFTAQGERE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I+ L + Y PLVADIHF P A AE +K+R+NPGN+ D+ F+ LEY
Sbjct: 69 ARNLGAIRKQLDEAGYTTPLVADIHFNPRAADAAAEEVEKVRINPGNYVDKVKTFDLLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 129 TDEEYAAELQKIRDRFIPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR+ DF + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICREEDFPDVVISIKASNTVVMVKTVRLLVRTMESEDMHYPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L + + ++G P E
Sbjct: 249 KSAVGIGALLSDGIGDTIRVSLSEDPEAEIPVARKLVDYILE----REGHEPLEATPAPG 304
Query: 385 FD---FQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG 441
+D +RR ++ EG ++ V+ D S D P+ +Y + +
Sbjct: 305 YDPVTVERRHSRV---TEGIGGNFPPVVISDRSN-GDFEFDHASQPDYIY--IGKEDPDN 358
Query: 442 MPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNL 501
+P VD+ +E P+ ++ L D S +P + +
Sbjct: 359 LPDNFRLLVDAHFWKERPNAYPFFIASEIEELKDYS--------------VPLKFIRLTY 404
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARR 561
++L+ ++L + T ++V L + A R
Sbjct: 405 RDLTDRVIEVLKKDTSVIVVLSTHHR--------------------------NGIAAERA 438
Query: 562 LFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDF 621
L + PVI H + + L + + + G LL+DG GDG++L G +
Sbjct: 439 AMHRLLIAGCDVPVILHRDYRE-TDTEALQLKSAADFGTLLLDGFGDGIMLHNEGCEAMA 497
Query: 622 LRDTSFNLLQGV 633
F +LQ
Sbjct: 498 TDSCMFGILQAT 509
>gi|298387830|ref|ZP_06997380.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 1_1_14]
gi|298259435|gb|EFI02309.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 1_1_14]
Length = 613
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTSTMDTEACVEQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFTDVVISIKASNTVVMVKTVRLLVAVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLCDGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|300727466|ref|ZP_07060858.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
bryantii B14]
gi|299775270|gb|EFI71870.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
bryantii B14]
Length = 625
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 210/321 (65%), Gaps = 5/321 (1%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V VG V IG +P+R+Q+MTT +T D V++ I G +LVR+T QG RE
Sbjct: 9 RRQTSNVHVGAVDIGGNNPVRIQSMTTTNTNDTEACVKQAEDIIKAGGELVRLTTQGSRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + PLVAD+HF P VA A + +R+NPGN+ D +F Q+EY
Sbjct: 69 AENLKNINAGLRNDGHQTPLVADVHFNPHVADVAALYAEGVRINPGNYVDPARKFIQVEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY++EL+ IEE F P + CK++ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYEQELKKIEERFVPFLNICKEHHTAIRIGVNHGSLSDRIRNRYGDTPAGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K +F N + S+K+SN VVMVQ+ RLLV M G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKKENFSNVVISIKSSNTVVMVQSVRLLVDTMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFE-EKHR 382
KSA+GIG LL DG+GDTIRVSL+E P EI + L + +G ++ + + P E K
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPAAEIPVAKHLVDYIGKKSGHI---IVPGEANKDF 305
Query: 383 HYFDFQRRSGQLPIQKEGEEV 403
++ RR+ Q I G V
Sbjct: 306 NWISPTRRNTQPVINIGGNHV 326
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNG-IHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
R+ R L + + L+ PVI + + + D + A ++GAL++DGL DG+ L
Sbjct: 443 RLACQRALVHEMMNHGLHNPVIFAQMYEHTQAQKSDFQLEAAADMGALMMDGLVDGIWLM 502
Query: 614 APG----QDFDFLRDTSFNLLQG 632
G QD D DT+FN+LQ
Sbjct: 503 NNGNLAQQDVD---DTAFNILQA 522
>gi|383121606|ref|ZP_09942313.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 1_1_6]
gi|251837932|gb|EES66021.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 1_1_6]
Length = 613
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTSTMDTEACVEQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKEIHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFTDVVISIKASNTVVMVKTVRLLVAVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLCDGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|29347927|ref|NP_811430.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
thetaiotaomicron VPI-5482]
gi|50401027|sp|Q8A4T0.1|ISPG_BACTN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|29339829|gb|AAO77624.1| GcpE, 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Bacteroides thetaiotaomicron VPI-5482]
gi|290770228|gb|ADD61985.1| putative protein [uncultured organism]
Length = 613
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTSTMDTEACVEQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFTDVVISIKASNTVVMVKTVRLLVAVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLCDGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|218258484|ref|ZP_03474851.1| hypothetical protein PRABACTJOHN_00506 [Parabacteroides johnsonii
DSM 18315]
gi|218225456|gb|EEC98106.1| hypothetical protein PRABACTJOHN_00506 [Parabacteroides johnsonii
DSM 18315]
Length = 612
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 200/552 (36%), Positives = 281/552 (50%), Gaps = 54/552 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +GN +G ++PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 9 RRKSSIVNIGNTPLGGDNPIRIQSMANVSTMDTDAAVHQAIRMIEAGAEYVRFTAQGERE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I+ L + Y PLVADIHF P A AE +K+R+NPGN+ D+ F+ LEY
Sbjct: 69 ARNLGAIRKQLDEAGYTTPLVADIHFNPRAADAAAEEVEKVRINPGNYVDKVKTFDLLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 129 TDEEYAAELQKIRDRFIPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR+ DF + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICREEDFPDVVISIKASNTVVMVKTVRLLVRTMESEDMHYPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L + + ++G P E
Sbjct: 249 KSAVGIGALLSDGIGDTIRVSLSEDPEAEIPVARKLVDYILE----REGHEPLEATPAPG 304
Query: 385 FD---FQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG 441
+D RR ++ EG ++ V+ D S D P+ +Y + +
Sbjct: 305 YDPVTVGRRHSRV---TEGIGGNFPPVVISDRSN-GDFEFDHASQPDYIY--IGKEDPDN 358
Query: 442 MPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNL 501
+P VD+ +E P+ ++ L D S +P + +
Sbjct: 359 LPDNFRLLVDAHFWKERPNAYPFFIASEIEELKDYS--------------VPLKFIRLTY 404
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARR 561
++L+ ++L + T ++V L + A R
Sbjct: 405 RDLTDRVIEVLKKDTSVIVVLSTHHR--------------------------NGIAAERA 438
Query: 562 LFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDFDF 621
L + PVI H + + L + + + G LL+DG GDG++L G +
Sbjct: 439 AMHRLLIAGCDVPVILHRDYRE-TDTEALQLKSAADFGTLLLDGFGDGIMLHNEGCEAMV 497
Query: 622 LRDTSFNLLQGV 633
F +LQ
Sbjct: 498 TDSCMFGILQAT 509
>gi|340347180|ref|ZP_08670292.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
dentalis DSM 3688]
gi|433652380|ref|YP_007278759.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Prevotella
dentalis DSM 3688]
gi|339609750|gb|EGQ14613.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
dentalis DSM 3688]
gi|433302913|gb|AGB28729.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Prevotella
dentalis DSM 3688]
Length = 663
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 155/287 (54%), Positives = 197/287 (68%), Gaps = 1/287 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V VG + +G +P+R+Q+MTT DT D +V + RI G +LVR+T QG RE
Sbjct: 9 RRETTEVHVGALGMGGGNPVRIQSMTTTDTNDTEASVAQSERIIKAGGELVRLTTQGIRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I + ++ PLVAD+HF P+VA A +K+RVNPGN+ D +F +LEY
Sbjct: 69 AENLKNINAGIRADGFSTPLVADVHFNPNVADVAARYAEKVRVNPGNYVDPARRFVKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE F P + CK A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELQKIEARFVPFLNICKANHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR+ F + + S+KASN VVMV++ RLLVA M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICRREQFADVVISIKASNTVVMVRSVRLLVARMEAEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAEL 370
KSA+GIG LL DG+GDTIRVSL+E PE EI R LA+ +G +A L
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPEAEIPVARHLADYVGRKAGHL 295
>gi|380692514|ref|ZP_09857373.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
faecis MAJ27]
Length = 613
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNSIRVQSMTNTSTQDTEACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEEHFTDVVISIKASNTVVMVKTVRLLVAVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|319900818|ref|YP_004160546.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
helcogenes P 36-108]
gi|319415849|gb|ADV42960.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
helcogenes P 36-108]
Length = 624
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 153/282 (54%), Positives = 193/282 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D V + RIAD G + VR+T QG +E
Sbjct: 8 RRETSEVNIGATPMGGFNPIRIQSMTNTATQDTEACVAQAKRIADAGGEYVRLTAQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L + Y +PL+ADIHF P VA A +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLMNINAALRKDGYMVPLIADIHFNPKVADVAALYAEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYTQELQKIRDRFIPFLYICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + DF + + S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEQDFKDVVISIKASNTVVMVKTVRLLAAVMEKEGMHFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMR 366
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L + M+
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEAEIPVARKLVDYIMQ 289
>gi|53715645|ref|YP_101637.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis YCH46]
gi|73621078|sp|Q64N34.1|ISPG_BACFR RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|52218510|dbj|BAD51103.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Bacteroides fragilis YCH46]
Length = 626
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFSPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285
>gi|375360419|ref|YP_005113191.1| putative GcpE terpenoid biosynthesis protein [Bacteroides fragilis
638R]
gi|301165100|emb|CBW24668.1| putative GcpE terpenoid biosynthesis protein [Bacteroides fragilis
638R]
Length = 626
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFSPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285
>gi|265767410|ref|ZP_06095076.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_16]
gi|383119673|ref|ZP_09940411.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_2_5]
gi|251944715|gb|EES85190.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_2_5]
gi|263252715|gb|EEZ24227.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_16]
Length = 626
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFSPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285
>gi|336411562|ref|ZP_08592026.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_56FAA]
gi|423259929|ref|ZP_17240852.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL07T00C01]
gi|423267584|ref|ZP_17246565.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL07T12C05]
gi|335941358|gb|EGN03215.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_56FAA]
gi|387775574|gb|EIK37680.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL07T00C01]
gi|392696427|gb|EIY89621.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL07T12C05]
Length = 626
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFSPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285
>gi|301312366|ref|ZP_07218283.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 20_3]
gi|423337236|ref|ZP_17314980.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides distasonis CL09T03C24]
gi|300829788|gb|EFK60441.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 20_3]
gi|409238424|gb|EKN31217.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides distasonis CL09T03C24]
Length = 611
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ +G+ +G E+PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 8 RRKSSVAQIGDTPMGGENPIRIQSMANVSTMDTEAAVAQAIRMIEAGAEYVRFTAQGERE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A EI+ L ++ Y PLVADIHF P A A +K+R+NPGN+ D+ F LEY
Sbjct: 68 ARNLGEIRKQLNEQGYTTPLVADIHFNPRAADAAAGEVEKVRINPGNYVDKVKTFSHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY E++ I E F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 128 TDEEYAAEIEKIRERFVPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR+ +F + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICREENFPDVVISIKASNTVVMVRTVRLLVRTMEAENMHYPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIGTLL DG+GDTIRVSL+E PE E+ R+L +
Sbjct: 248 KSAVGIGTLLCDGIGDTIRVSLSEDPEAEMPVARKLVD 285
>gi|427388195|ref|ZP_18884078.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
oleiciplenus YIT 12058]
gi|425724778|gb|EKU87652.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
oleiciplenus YIT 12058]
Length = 615
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/282 (53%), Positives = 192/282 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D + +I D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGATPMGGSNPIRIQSMTNTATQDTEACAAQAKQIVDAGGEYVRLTAQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L Q Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEY
Sbjct: 68 AENLMNINAALRQDGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQELQKIRDRFVPFLNICKENYTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLAAVMEKEGMHFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMR 366
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L + M+
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVDYIMQ 289
>gi|384449366|ref|YP_005661968.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pneumoniae LPCoLN]
gi|269303250|gb|ACZ33350.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydophila
pneumoniae LPCoLN]
Length = 613
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 207/302 (68%), Gaps = 1/302 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT TV +GN+ IGS+H I+ Q+MTT T D+ TVE++ +A+ D+VR+TVQG +E
Sbjct: 12 RRKTHTVRIGNLYIGSDHSIKTQSMTTTSTTDIDSTVEQIYALAEHNCDIVRVTVQGIKE 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE- 203
A AC +IK L+ NIPLVADIHF P A+ VA+ DK+R+NPGN+ D+R F+ +
Sbjct: 72 AQACEKIKERLIALGLNIPLVADIHFFPQAAMLVADFADKVRINPGNYIDKRNMFKGTKI 131
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT+ Y + L +EE F+PLVEKCK+ G+A+RIG NHGSLS+RIM YGD+ GMV SA
Sbjct: 132 YTEASYAQSLLRLEEKFAPLVEKCKRLGKAMRIGVNHGSLSERIMQKYGDTIEGMVASAI 191
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
E+ +C KL++ + +FSMK+SNP +MV AYR L ++ GW YPLHLGVTEAG G DG
Sbjct: 192 EYIAVCEKLNYRDVVFSMKSSNPKIMVTAYRQLAKDLDARGWLYPLHLGVTEAGMGMDGI 251
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRH 383
+KSA+GIGTLL +GLGDTIR SLT P EI C L +L + PF +H
Sbjct: 252 IKSAVGIGTLLAEGLGDTIRCSLTGCPTTEIPVCDSLLRHTKIYLDLPEKKNPFSLQHSE 311
Query: 384 YF 385
F
Sbjct: 312 NF 313
>gi|359404901|ref|ZP_09197706.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
stercorea DSM 18206]
gi|357559851|gb|EHJ41280.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
stercorea DSM 18206]
Length = 618
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR T V VG++ IG + PIRVQ+MTT +T D V + RI G +LVR+T QG+RE
Sbjct: 9 RRSTSPVQVGDIQIGGDAPIRVQSMTTTNTNDTEACVAQAERIIKAGGELVRLTTQGRRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PLVAD+HF +VA A +K+RVNPGN+ D F+++EY
Sbjct: 69 AENLQNINAQLRADGYQTPLVADVHFNANVADVAALYAEKVRVNPGNYVDPARVFKKIEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD EY EL+ +E+ F P + C+++ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 129 TDAEYADELKKLEDRFVPFLNICREHHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K F N + S+KASN V+MV+ RLL++EM YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKKEQFDNVVISIKASNTVIMVRTVRLLISEMDQADMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E PE EI R L +
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPEAEIPVARHLVD 286
>gi|288801806|ref|ZP_06407248.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
melaninogenica D18]
gi|288335848|gb|EFC74281.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
melaninogenica D18]
Length = 642
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 214/564 (37%), Positives = 293/564 (51%), Gaps = 49/564 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+RVQ+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGALNIGGENPVRVQSMTTTSTDDTEGSVAQAKRIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L NY PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADNYMAPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELQKIEDRLIPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DFH+ + S+K+SN VVMV++ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKYDFHDIIISIKSSNTVVMVRSVRLLVAEMDKEGMQYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI P + +R E + + Y
Sbjct: 249 KSAVGIGALLADGLGDTIRVSLSEEPECEI-PVAKHLTWYIRRHEKHLLIPAEQYADFDY 307
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG-MP 443
RR GE V + VS +L P+ +Y V G +P
Sbjct: 308 LHPNRRETVAAGNIGGENVPVVIATRKADQATAEVSSPELPKPDYIY-------VQGELP 360
Query: 444 FKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
K IL D+DA + + S+ + P+ P A
Sbjct: 361 EKRAKKQKYIL--------DYDAYMDIANSGKQSLENVYPIFPVTGMPFISA-------- 404
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA-ARRL 562
+ + +V G S E L LK +++ + +++++G +A A +L
Sbjct: 405 --------INSDVKFLVLKFGTPSEEFLACLKTHPEVVVVC-MTSHQNRLGDQRALAHQL 455
Query: 563 FEYLSENNLNFPVIHH-------------IQFPNGIHRDDLVIGAGTNVGALLVDGLGDG 609
+N + F ++ Q ++ + A ++GAL++DGL DG
Sbjct: 456 MIAGVKNPIIFAQMYQHSTTEEKEESSNSQQAETTTAKEKFQLEAAADMGALMMDGLTDG 515
Query: 610 LLLEAPGQ-DFDFLRDTSFNLLQG 632
+ L G + + T+F +LQ
Sbjct: 516 IWLMNNGNLSQEDIEQTAFGILQA 539
>gi|160883640|ref|ZP_02064643.1| hypothetical protein BACOVA_01612 [Bacteroides ovatus ATCC 8483]
gi|423291668|ref|ZP_17270515.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus CL02T12C04]
gi|423298337|ref|ZP_17276395.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus CL03T12C18]
gi|156111053|gb|EDO12798.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus ATCC 8483]
gi|392662791|gb|EIY56347.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus CL02T12C04]
gi|392663249|gb|EIY56800.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus CL03T12C18]
Length = 613
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC DF + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEDFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMTFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|302344796|ref|YP_003813149.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
melaninogenica ATCC 25845]
gi|302150145|gb|ADK96407.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
melaninogenica ATCC 25845]
Length = 642
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 214/564 (37%), Positives = 293/564 (51%), Gaps = 49/564 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+RVQ+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGALNIGGENPVRVQSMTTTSTDDTEGSVAQAKRIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L NY PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADNYMAPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELQKIEDRLIPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DFH+ + S+K+SN VVMV++ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKYDFHDIVISIKSSNTVVMVRSVRLLVAEMDKEGMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI P + +R E + + Y
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEI-PVAKHLTWYIRRHEKHHLIPAEQYDGFDY 307
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG-MP 443
RR GE V + VS +L P+ +Y V G +P
Sbjct: 308 LHPNRRETVAAGNIGGENVPVVIATRKADQATAEVSSPELPKPDYIY-------VQGELP 360
Query: 444 FKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
K IL D+DA + L S+ + P+ P A
Sbjct: 361 EKRAKKQKYIL--------DYDAYMNLANSGKQSLENVYPIFPVTGMPFISA-------- 404
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA-ARRL 562
+ + +V G S E L LK +++ + +++++G +A A +L
Sbjct: 405 --------INSDVKFLVLKFGTPSEEFLACLKAHPEVVVVC-MTSHQNRLGDQRALAHQL 455
Query: 563 FEYLSENNLNFPVIHH-------------IQFPNGIHRDDLVIGAGTNVGALLVDGLGDG 609
+N + F ++ Q ++ + A ++GAL++DGL DG
Sbjct: 456 MIAGVKNPIIFAQMYQHSTTEEKEESSNSQQAETTTAKEKFQLEAAADMGALMMDGLTDG 515
Query: 610 LLLEAPGQ-DFDFLRDTSFNLLQG 632
+ L G + + T+F +LQ
Sbjct: 516 IWLMNNGNLSQEDVEQTAFGILQA 539
>gi|423282863|ref|ZP_17261748.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis HMW 615]
gi|404581472|gb|EKA86170.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis HMW 615]
Length = 626
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 189/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285
>gi|60683585|ref|YP_213729.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis NCTC 9343]
gi|73621077|sp|Q5L7W2.1|ISPG_BACFN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|60495019|emb|CAH09837.1| putative GcpE terpenoid biosynthesis protein [Bacteroides fragilis
NCTC 9343]
Length = 626
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 189/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285
>gi|423272037|ref|ZP_17251006.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL05T00C42]
gi|423275961|ref|ZP_17254904.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL05T12C13]
gi|392695724|gb|EIY88930.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL05T00C42]
gi|392700114|gb|EIY93281.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis CL05T12C13]
Length = 626
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 152/278 (54%), Positives = 189/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAVPLGGPNPIRIQSMTNTPTQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSTGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ AVRIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLV+ M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVSVMEQEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEEPEAEIPVARKLVD 285
>gi|325299093|ref|YP_004259010.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
salanitronis DSM 18170]
gi|324318646|gb|ADY36537.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
salanitronis DSM 18170]
Length = 612
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 188/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+ V VG +G +PIRVQ+MT T D VE+ +RI + G + VR+T QG RE
Sbjct: 8 RRQASEVYVGGTPMGGTNPIRVQSMTNTPTTDTEACVEQAIRIIEAGGEYVRLTTQGTRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L K Y PL+AD+HF P VA A + +R+NPGN+ D F++LEY
Sbjct: 68 AENLKNINIGLRSKGYGTPLIADVHFNPKVAEVAALYAEGVRINPGNYTDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KE+Q I E P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAKEIQKIRERLVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + F + + S+KASN V+MV+ RLLVA+M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEEQFTDVVISIKASNTVIMVKTVRLLVAQMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSLTE PE EI R+L +
Sbjct: 248 KSALGIGALLCDGLGDTIRVSLTEAPEAEIPVARKLVD 285
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
R+ R L L + L P++ Q+ +D + A T++GALL+DGL DG+LL
Sbjct: 431 RLGEFRGLAHQLMASGLKNPLVF-FQYYKETCLEDFQLKAATDMGALLIDGLCDGILLYN 489
Query: 615 PGQDFDFLR--DTSFNLLQ 631
G L+ +T+F +LQ
Sbjct: 490 DGDAISDLKLDETAFGILQ 508
>gi|357043355|ref|ZP_09105050.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
histicola F0411]
gi|355368529|gb|EHG15946.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
histicola F0411]
Length = 636
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 211/559 (37%), Positives = 294/559 (52%), Gaps = 46/559 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG ++P+RVQ+MTT T D AG+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGALDIGGDNPVRVQSMTTTSTDDTAGSVAQAERIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADGYMAPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELQKIEDRLVPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK F++ + S+K+SN VVMVQ+ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKYQFNDIVISIKSSNTVVMVQSVRLLVAEMDKEGMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI P + +R+ E + + Y
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEI-PVAKYLTWYIRSHEKHLLIPAEQAPDFDY 307
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+RR G+ V + ++VS +L P+ +Y V G
Sbjct: 308 LHPKRRETVAAGNIGGDNVPVVIATRKAEHAAVAVSSPELPKPDYIY-------VQGELP 360
Query: 445 KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQEL 504
+ LA +L D+DA + L ++ + P+ P
Sbjct: 361 EKLAKNQKYIL-------DYDAYMELANSGKRALDGVYPIFPVTGMPF------------ 401
Query: 505 STGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFE 564
LL + +V G S E L LK +++ + +++++G R L
Sbjct: 402 ----ISLLKADVKFLVLKYGTPSEEFLACLKTHPEVVVVC-MTSHQNRLGD---QRALVH 453
Query: 565 YLSENNLNFPVIHHIQFPNGIH----------RDDLVIGAGTNVGALLVDGLGDGLLLEA 614
L + PV+ + + ++ L + A ++GAL++DGL DGL L
Sbjct: 454 QLMIAGVKNPVVFAQMYQHSSSDTNTFKAISPKEQLQLEAAADMGALMMDGLTDGLWLMN 513
Query: 615 PGQ-DFDFLRDTSFNLLQG 632
G + + T+F +LQ
Sbjct: 514 NGDIAQEDVEQTAFAILQA 532
>gi|336406359|ref|ZP_08587015.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 1_1_30]
gi|335935021|gb|EGM97002.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 1_1_30]
Length = 614
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 9 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 129 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICVAENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMTFPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 249 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 286
>gi|288800209|ref|ZP_06405668.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 299 str. F0039]
gi|288333457|gb|EFC71936.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 299 str. F0039]
Length = 603
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 203/539 (37%), Positives = 285/539 (52%), Gaps = 55/539 (10%)
Query: 109 MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168
MTT DT D VE+ RI +G +LVR+T QG REA+ I + L K Y +PLVAD+
Sbjct: 1 MTTTDTNDTQACVEQAERIIQKGGELVRLTTQGVREAENMKCINDVLKAKGYEVPLVADV 60
Query: 169 HFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK 228
HF P VA A K+R+NPGN+ D F++LEYTD+EY EL IEE F P + CK
Sbjct: 61 HFNPRVADVAATTTQKVRINPGNYVDPARTFKKLEYTDEEYAHELLKIEERFIPFLNICK 120
Query: 229 KYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVV 288
+ +RIG NHGSLSDRI + YGD+P G+VES EF RIC++ F++ + S+K+SN V+
Sbjct: 121 ENKTGIRIGVNHGSLSDRIRNRYGDTPEGIVESCLEFLRICQRESFNDVVISIKSSNTVI 180
Query: 289 MVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE 348
MV++ RLLV M G YPLHLGVTEAGEGEDGR+KSA+GIG LL DG+GDTIRVSL+E
Sbjct: 181 MVRSMRLLVEAMEKEGMSYPLHLGVTEAGEGEDGRIKSAVGIGALLSDGIGDTIRVSLSE 240
Query: 349 PPEKEIDPCRRLANLGMRAAELQQGVAPFE-----EKHRHYFDFQRRSGQLPIQKEGEEV 403
PE+EI + L + + VAP K +Y RRS GE+V
Sbjct: 241 EPEEEIPVAKHLCDY------ITSKVAPVTLPETPAKDFNYTHPTRRSTCQVGNIGGEKV 294
Query: 404 DYRGVLH--------RDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILL 455
V +D ++ +S D+ +AP+ Y + VG
Sbjct: 295 PVVIVSKPSSMFEEPKDEEEVVIISSDKPQAPKADY------MYVG-------------- 334
Query: 456 RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLLPEG 515
ELP D KR + GV L EQ + + + + N S +
Sbjct: 335 SELPQNIDK------KRCYIVDYGVYNDLKEQYSDLMLYPIFPYN----SVPFISHIQSD 384
Query: 516 TRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPV 575
+ +V G +S E + LK +++ + ++++GR R L L +N+ PV
Sbjct: 385 IKFLVLQYGADSDEYVACLKAHPEVVVI-SMAGKDNQLGR---HRALVHDLMNHNITNPV 440
Query: 576 IH-HIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGL-LLEAPGQDFDFLRDTSFNLLQG 632
I + + + + ++ A ++GAL++DGL DG+ L+ A + TSF +LQ
Sbjct: 441 IFAQLYMHSSEEQSEFLLEAAADMGALMIDGLTDGIWLMNAGSLSNAIVEHTSFGILQA 499
>gi|262409208|ref|ZP_06085752.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_22]
gi|294647418|ref|ZP_06725006.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus SD CC 2a]
gi|294809809|ref|ZP_06768491.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
xylanisolvens SD CC 1b]
gi|345509881|ref|ZP_08789467.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D1]
gi|229446039|gb|EEO51830.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D1]
gi|262352955|gb|EEZ02051.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 2_1_22]
gi|292637245|gb|EFF55675.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus SD CC 2a]
gi|294442995|gb|EFG11780.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
xylanisolvens SD CC 1b]
gi|295085289|emb|CBK66812.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
xylanisolvens XB1A]
Length = 614
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 9 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 129 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICVAENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMTFPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 249 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 286
>gi|423221278|ref|ZP_17207771.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
caccae CL03T12C61]
gi|392622148|gb|EIY16286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
caccae CL03T12C61]
Length = 610
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IR+Q+MT T+D V++ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRIQSMTNTSTQDTQACVDQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIRDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEEHFTDVVISIKASNTVVMVKTVRLLVAVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|336416953|ref|ZP_08597284.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus 3_8_47FAA]
gi|335936997|gb|EGM98907.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus 3_8_47FAA]
Length = 613
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/322 (49%), Positives = 207/322 (64%), Gaps = 7/322 (2%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG---VAPFEEKH 381
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L + + L+Q + E
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVDYVL----LRQDHPYIPGLEAPE 303
Query: 382 RHYFDFQRRSGQLPIQKEGEEV 403
+Y +RR + GE V
Sbjct: 304 FNYLSLERRKTKAVRNIGGEHV 325
>gi|325859677|ref|ZP_08172807.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
denticola CRIS 18C-A]
gi|325482603|gb|EGC85606.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
denticola CRIS 18C-A]
Length = 641
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 214/564 (37%), Positives = 295/564 (52%), Gaps = 49/564 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+R+Q+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGTLDIGGENPVRIQSMTTTSTDDTEGSVAQAERIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADGYMTPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYARELQKIEDRLVPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPAGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DFH+ + S+K+SN VVMV++ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKHDFHDIVISIKSSNTVVMVRSVRLLVAEMDKEGMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI R LA +R E + Y
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEIPVARYLAWY-IRRHEKHLLIPGERYSGFDY 307
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG-MP 443
+RR G V + G + VS +L P+ +Y V G +P
Sbjct: 308 LRPERRETVAAGNIGGGNVPVVIATRKTGQAAVDVSSPELPKPDYIY-------VQGRLP 360
Query: 444 FKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
+ + IL D+DA + L S+ + P+ P A
Sbjct: 361 ENKVKNLKYIL--------DYDAYMELAHGGRQSLENVYPIFPVTGMPFISA-------- 404
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA-ARRL 562
+ + +V G S E L LK +++ + +++++G +A A +L
Sbjct: 405 --------IDTEVKFLVLKFGTPSEEFLACLKAHPEVVVVC-MTSHQNRLGDQRALAHQL 455
Query: 563 FEYLSENNLNFPVIHHIQFPNG-------------IHRDDLVIGAGTNVGALLVDGLGDG 609
+N + F ++ P ++ + A ++GAL++DGL DG
Sbjct: 456 MIAGVKNPIVFAQMYRHSTPAAEEEPLASQSTTPITPKEQFQLEAAADMGALMMDGLTDG 515
Query: 610 LLLEAPGQ-DFDFLRDTSFNLLQG 632
+ L G D + T+F +LQ
Sbjct: 516 VWLMNDGNLSQDDIEQTAFAILQA 539
>gi|282858923|ref|ZP_06268063.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
bivia JCVIHMP010]
gi|424900000|ref|ZP_18323542.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Prevotella
bivia DSM 20514]
gi|282588305|gb|EFB93470.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
bivia JCVIHMP010]
gi|388592200|gb|EIM32439.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Prevotella
bivia DSM 20514]
Length = 633
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 298/560 (53%), Gaps = 49/560 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VGN+ IG ++P+RVQ+MTT T D +V +V RI G +LVR+T QG+RE
Sbjct: 9 RRKTSVTHVGNLDIGGDNPVRVQSMTTTSTDDTEASVAQVKRIIAAGGELVRLTTQGRRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L + N PL AD+HF +VA A K+R+NPGN+ D F+ LEY
Sbjct: 69 AENLKNINATLRGEGINTPLCADVHFNANVADVAATTTAKVRINPGNYVDPGRTFKVLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYAQELQKIEDRLVPFINLCKENHTAVRIGVNHGSLSDRIRNRYGDTPAGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DFH+ + S+K+SN VVMVQ+ RLLVAEM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKYDFHDVVISIKSSNTVVMVQSVRLLVAEMEKEGMEYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI P + MR EKH
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPEAEI-PVAKHLTWYMRK----------HEKHV-- 295
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+P + ++ +Y + R +V D AP ++ A LV +
Sbjct: 296 --------MIPAEAN-KDFNYLAPVRRKTVAAANVGGDN--APVVIATRSAENLVPQVKA 344
Query: 445 KDLATVDSILLR-ELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
+ T D I ++ LP A+L K+ I V L+ T LP +
Sbjct: 345 SGVPTPDYIYVQGALP------AQLDAKQKYIIDYNVYIELAN--TSKLPKGNIYPIFPV 396
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLF 563
L L+ + +V G + E L+ +++ + +++++G +R F
Sbjct: 397 LGQTFIGLIHSPIKFLVLKYGTPTDEFFACLRHHPEVVVVC-MTTHQNRLGD----QRAF 451
Query: 564 EY-LSENNLNFPVIHHIQFPNGIHRDD---------LVIGAGTNVGALLVDGLGDGLLLE 613
+ L L P++ + + D + A ++GAL++DGL DG+ L
Sbjct: 452 AHQLMNEGLTNPIVFAQMYEHTTTERDTEKVSAKEKFQLEAAADMGALMMDGLVDGVWLM 511
Query: 614 APGQ-DFDFLRDTSFNLLQG 632
G D + T+F +LQ
Sbjct: 512 NNGDLSQDDVEQTAFGILQA 531
>gi|423216348|ref|ZP_17202872.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
xylanisolvens CL03T12C04]
gi|392690881|gb|EIY84134.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
xylanisolvens CL03T12C04]
Length = 614
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 9 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 129 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICVAENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 249 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 286
>gi|153806077|ref|ZP_01958745.1| hypothetical protein BACCAC_00328 [Bacteroides caccae ATCC 43185]
gi|149130754|gb|EDM21960.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
caccae ATCC 43185]
Length = 610
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IR+Q+MT T+D V++ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRIQSMTNTSTQDTQACVDQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIRDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEEHFTDVVISIKASNTVVMVKTVRLLVAVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|193215231|ref|YP_001996430.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chloroherpeton thalassium ATCC 35110]
gi|193088708|gb|ACF13983.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chloroherpeton thalassium ATCC 35110]
Length = 687
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/280 (51%), Positives = 202/280 (72%), Gaps = 2/280 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y +S++ RRKT V GN+ +G PIRV++MTT DT + VE+ R+ + +++
Sbjct: 4 YTKSVYSYRRRKTVEVKFGNIKLGGMQPIRVESMTTADTMNTEAVVEQSRRLYEADCEII 63
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT + A+ I++ L + PLVADIHF P+ A++ E + +R+NPGN+AD+
Sbjct: 64 RITAPSIKSAENLKNIRDILRKDGIQTPLVADIHFTPNAAMKAVEFVENVRINPGNYADK 123
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ +F +++TD EYQ+EL+ + + F PLV K K+YG ++RIGTNHGSLSDRIMS YGD+P
Sbjct: 124 K-RFNHIDFTDAEYQEELERLHDEFKPLVLKAKEYGVSMRIGTNHGSLSDRIMSRYGDTP 182
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVT 314
GMVESA EFAR+C D+++ LFSMK+SN VM++AYRLL A+ + YPLHLGVT
Sbjct: 183 LGMVESALEFARVCEMYDYYDVLFSMKSSNVRVMIEAYRLLAAQADRELKYAYPLHLGVT 242
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG+G++GR+KS++GIG LL+DGLGDTIRVSLTE P KE+
Sbjct: 243 EAGDGDEGRIKSSMGIGALLEDGLGDTIRVSLTEDPVKEV 282
>gi|383114021|ref|ZP_09934787.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D2]
gi|313697285|gb|EFS34120.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D2]
Length = 613
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|237722861|ref|ZP_04553342.1| GcpE [Bacteroides sp. 2_2_4]
gi|229447383|gb|EEO53174.1| GcpE [Bacteroides sp. 2_2_4]
Length = 613
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|299147570|ref|ZP_07040634.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_23]
gi|298514357|gb|EFI38242.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_23]
Length = 613
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQRYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|424665482|ref|ZP_18102518.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis HMW 616]
gi|404574726|gb|EKA79474.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis HMW 616]
Length = 655
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 188/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D V + RI D G + +R+T QG +E
Sbjct: 49 RRETSEVNIGAAPLGGSNPIRIQSMTNTATQDTEACVAQAKRIVDAGGEYIRLTTQGVKE 108
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A +K+R+NPGN+ D F+QLEY
Sbjct: 109 AENLMNINIGLRSDGYMVPLVADVHFSPKVADVAARYAEKVRINPGNYVDPGRTFKQLEY 168
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 169 TDEEYAAELQKIRDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 228
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 229 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVAVMEQEGMAFPLHLGVTEAGDGEDGRI 288
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L +
Sbjct: 289 KSALGIGALLSDGMGDTIRVSLSEEPEAEIPVARKLVD 326
>gi|345882106|ref|ZP_08833613.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oulorum F0390]
gi|343918261|gb|EGV29029.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oulorum F0390]
Length = 615
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 151/283 (53%), Positives = 195/283 (68%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
I + RR+T TV +G++ +GS PIRVQ+MTT +T D V + I D G +LVR+T
Sbjct: 4 IFQYKRRETSTVHIGDLEMGSAFPIRVQSMTTTNTNDTEACVHQAREIIDAGGELVRLTT 63
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
QG REA+ I + L Y+ PLVAD+HF P+VA + +K+R+NPGN+ D +F
Sbjct: 64 QGIREAENLKNIHDGLHALGYHTPLVADVHFNPNVADVASRFTEKVRINPGNYVDPARKF 123
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
EY+D+EY EL+ IE F P + CK+ A+RIG NHGSLSDRI ++YGD+P G+V
Sbjct: 124 ILQEYSDEEYAGELKKIEARFVPFLNLCKENHTAIRIGVNHGSLSDRIRNHYGDTPEGIV 183
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ES EF RIC++ FH+ + S+KASN VVMV++ RLLVAEM YPLHLGVTEAGEG
Sbjct: 184 ESCMEFLRICQREAFHDVVISIKASNTVVMVRSVRLLVAEMEKENMHYPLHLGVTEAGEG 243
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
EDGR+KSA+GIG LL DG+GDTIRVSL+E P EI R L +
Sbjct: 244 EDGRIKSAVGIGALLADGIGDTIRVSLSEEPAAEIPVARHLVD 286
>gi|293373438|ref|ZP_06619793.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus SD CMC 3f]
gi|292631576|gb|EFF50199.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
ovatus SD CMC 3f]
Length = 613
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPAGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|150003981|ref|YP_001298725.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
vulgatus ATCC 8482]
gi|166216867|sp|A6L089.1|ISPG_BACV8 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|149932405|gb|ABR39103.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Bacteroides vulgatus ATCC 8482]
Length = 614
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRESSEVNIGATPLGGNNPIRIQSMTNTVTMDTEACVEQAKRIIDAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFQKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFIPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVKEMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
>gi|423302952|ref|ZP_17280973.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
finegoldii CL09T03C10]
gi|408470281|gb|EKJ88816.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
finegoldii CL09T03C10]
Length = 612
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IR+Q+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRIQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLKNINIGLRSQEYMVPLVADVHFNPKVADVAARYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVEENFTDVVISIKASNTVVMVKTVRLLVAVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|261878898|ref|ZP_06005325.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270334479|gb|EFA45265.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 644
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/302 (51%), Positives = 204/302 (67%), Gaps = 6/302 (1%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + V VG + +G ++P+R+Q+MTT +T D V + RI G +LVR+T QG RE
Sbjct: 9 RRSSSVVHVGAIDMGGDNPVRIQSMTTTNTNDTEACVAQAERIIKAGGELVRLTTQGIRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECF-DKIRVNPGNFADRRAQFEQLE 203
A+ I +L Q ++ PLVAD+HF P VA VA C+ +K+R+NPGN+ D +F + E
Sbjct: 69 AENLRNINAALRQAGFSTPLVADVHFNPKVA-DVAACYAEKVRINPGNYVDPARKFIRQE 127
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+EY +EL+ IEE F P + CK A+RIG NHGSLSDRI + YGD+P G+VES
Sbjct: 128 YTDEEYARELKKIEERFVPFLNICKANHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCL 187
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC+ F + + S+K+SN VVMVQ+ RLLV +M YPLHLGVTEAGEGEDGR
Sbjct: 188 EFLRICKTQHFDDVVISIKSSNTVVMVQSVRLLVGKMEEEDMHYPLHLGVTEAGEGEDGR 247
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAEL---QQGVAPFEE 379
+KSA+GIG LL DG+GDTIRVSL+E PE EI R L + +G +A +L Q A F+
Sbjct: 248 IKSAVGIGALLADGIGDTIRVSLSEEPEDEIPVARHLVDYIGRKAGQLVIPGQAYAGFDW 307
Query: 380 KH 381
H
Sbjct: 308 LH 309
>gi|313149353|ref|ZP_07811546.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313138120|gb|EFR55480.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 614
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 187/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 8 RRETSEVNIGAAPLGGSNPIRIQSMTNTATQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A +K+R+NPGN+ D F+QLEY
Sbjct: 68 AENLMNINIGLRSDGYMVPLVADVHFSPKVADVAARYAEKVRINPGNYVDPGRTFKQLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAAELQKIRDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG GEDGR+
Sbjct: 188 FLRICVDEKFTDVVISIKASNTVVMVKTVRLLVAVMEQEGMAFPLHLGVTEAGNGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGMGDTIRVSLSEEPEAEIPVARKLVD 285
>gi|423280824|ref|ZP_17259736.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis HMW 610]
gi|404583627|gb|EKA88303.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fragilis HMW 610]
Length = 655
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 188/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G +G +PIR+Q+MT T+D V + RI D G + VR+T QG +E
Sbjct: 49 RRETSEVNIGAAPLGGSNPIRIQSMTNTATQDTEACVAQAKRIVDAGGEYVRLTTQGVKE 108
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y +PLVAD+HF+P VA A +K+R+NPGN+ D F+QLEY
Sbjct: 109 AENLMNINIGLRSDGYMVPLVADVHFSPKVADVAARYAEKVRINPGNYVDPGRTFKQLEY 168
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 169 TDEEYAAELQKIRDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 228
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 229 FLRICVDEKFTDAVISIKASNTVVMVKTVRLLVAVMEQEGMAFPLHLGVTEAGDGEDGRI 288
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L +
Sbjct: 289 KSALGIGALLSDGMGDTIRVSLSEEPEAEIPVARKLVD 326
>gi|255693107|ref|ZP_05416782.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
finegoldii DSM 17565]
gi|260621149|gb|EEX44020.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
finegoldii DSM 17565]
Length = 613
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 191/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IR+Q+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 8 RRETTEVNIGAVPLGGPNSIRIQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y +PLVAD+HF P VA A +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLKNINIGLRSQEYMVPLVADVHFNPKVADVAARYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC +F + + S+KASN VVMV+ RLLVA M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDENFTDVVISIKASNTVVMVKTVRLLVAVMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|340351509|ref|ZP_08674424.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
pallens ATCC 700821]
gi|339617978|gb|EGQ22582.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
pallens ATCC 700821]
Length = 633
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 211/564 (37%), Positives = 300/564 (53%), Gaps = 56/564 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ VG + +G ++P+R+Q+MTT +T D +V + RI G +LVR+T QGKRE
Sbjct: 9 RRKSSVAHVGALDMGGDNPVRIQSMTTTNTNDTNASVAQAKRIIAAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + PL AD+HF +VA A +K+R+NPGN+ D F+ LEY
Sbjct: 69 AENLKHINAQLRTEGIMTPLCADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKILEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY KEL+ IEE +P + CK+ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 129 TDEEYAKELKKIEERLTPFINICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI +K DF++ + S+KASN VVMV++ RLLVAEM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFKKHDFNDIVISIKASNTVVMVRSVRLLVAEMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG--VAPFEE-KH 381
KSA+GIG LL DG+GDTIRVSL+E PE EI + LA R ++G + P E K
Sbjct: 249 KSAVGIGALLNDGIGDTIRVSLSEEPECEIPVAKYLA----RYIRQKKGHIIVPAETFKD 304
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKS--LAAKLV 439
Y +RR + G+ V H + + L P+ +Y L AKL
Sbjct: 305 FDYLRPERRKTKAVENIGGDNVPIVIATHNAAEHNADI-VSTLPTPDYIYTKDVLPAKLK 363
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLV 499
G + + D++A + L ++ + P+ P
Sbjct: 364 SGQKY----------------IIDYNAYIDLAAKGELPTENVFPIFPTPAIPF------- 400
Query: 500 NLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA- 558
+ T K+ + +V G S E L LK +++ + +++K+G +A
Sbjct: 401 ----IGTVKSKI-----KFLVVKYGTPSEELLACLK-YHPEVVVVCVSSHQNKLGEQRAL 450
Query: 559 ARRLFEYLSENNLNFPVIHHIQF---------PNGIHRDDLVIGAGTNVGALLVDGLGDG 609
++ EN + F ++ PN ++ + A ++GAL++DGL DG
Sbjct: 451 VHQMMIAGVENPVVFAQMYQFSSEESNKNTNEPNA--KEQFQLSAAADMGALMIDGLTDG 508
Query: 610 LLLEAPGQ-DFDFLRDTSFNLLQG 632
L L G D + T+F +LQ
Sbjct: 509 LWLMNNGNIPQDDIEQTAFGILQA 532
>gi|294675478|ref|YP_003576094.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
ruminicola 23]
gi|294473248|gb|ADE82637.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
ruminicola 23]
Length = 461
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/279 (53%), Positives = 189/279 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ VG + IG ++PIR+Q+M T DT + G V + RI D G +LVR T QG RE
Sbjct: 4 RRQSSEARVGGIGIGGQNPIRIQSMGTVDTNNTEGCVAQAKRIIDAGGELVRFTTQGTRE 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L YN PLVAD+HF A A+ +K+R+NPGN+ D F+ LEY
Sbjct: 64 AENMKNISAQLKADGYNTPLVADVHFTAHTADVAAQYCEKVRINPGNYVDPGRTFKHLEY 123
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ IE+ P + CK++ AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 124 TDEEYAAELQKIEKQLVPFLNICKEHHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCME 183
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI ++ +F++ + S+KASN VVMV RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 184 FLRIFKRENFNDVVISIKASNTVVMVTTMRLLVKTMDKEDMHYPLHLGVTEAGEGEDGRI 243
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANL 363
KSA+GIG LL +G+GDTIRVSL+E PE EI R+L ++
Sbjct: 244 KSAVGIGALLTEGIGDTIRVSLSEEPECEIPVARKLVDM 282
>gi|319639782|ref|ZP_07994512.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_40A]
gi|345518927|ref|ZP_08798360.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 4_3_47FAA]
gi|254833565|gb|EET13874.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 4_3_47FAA]
gi|317388599|gb|EFV69448.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_40A]
Length = 614
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRESSEVNIGATPLGGNNPIRIQSMTNTVTMDTEACVEQAKRIIDAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F +LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFIPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVKEMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
>gi|294778017|ref|ZP_06743451.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
vulgatus PC510]
gi|294448075|gb|EFG16641.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
vulgatus PC510]
Length = 614
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRESSEVNIGATPLGGNNPIRIQSMTNTVTMDTEACVEQAKRIIDAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F +LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFIPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVQEMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
>gi|423312874|ref|ZP_17290810.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
vulgatus CL09T03C04]
gi|392686905|gb|EIY80204.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
vulgatus CL09T03C04]
Length = 614
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRESSEVNIGATPLGGNNPIRIQSMTNTVTMDTEACVEQAKRIIDAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F +LEY
Sbjct: 68 AEHLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFIPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVKEMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
>gi|298482258|ref|ZP_07000445.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D22]
gi|298271545|gb|EFI13119.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D22]
Length = 614
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 190/278 (68%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V +G V +G + IRVQ+MT T+D VE+ RI D G + VR+T QG +E
Sbjct: 9 RRETTEVNIGAVPLGGPNSIRVQSMTNTSTQDTQACVEQAKRIVDAGGEYVRLTTQGIKE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
+ I L + Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F++LEY
Sbjct: 69 VENLMNINIGLRSQGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 129 TDEEYAQEIQKIHDRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC +F + + S+KASN VVMV+ RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICVAENFTDVVISIKASNTVVMVKTVRLLVDVMEKEGMAFPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 249 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 286
>gi|224537631|ref|ZP_03678170.1| hypothetical protein BACCELL_02513 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520740|gb|EEF89845.1| hypothetical protein BACCELL_02513 [Bacteroides cellulosilyticus
DSM 14838]
Length = 593
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 148/269 (55%), Positives = 186/269 (69%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D +V + RI D G + VR+T QG +EA+ I L +
Sbjct: 1 MGGSNPIRIQSMTNTATQDTEASVAQAKRIVDAGGEYVRLTAQGIKEAENLMNINAGLRR 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +ELQ I
Sbjct: 61 DGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEYTDEEYAQELQKIH 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC K DF +
Sbjct: 121 DRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVKEDFTDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVVMVKTVRLLAAVMEKEGMQFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLANLGMR 366
LGDTIRVSL+E PE EI R+L + M+
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLVDYIMQ 269
>gi|325268349|ref|ZP_08134982.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
multiformis DSM 16608]
gi|324989491|gb|EGC21441.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
multiformis DSM 16608]
Length = 641
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/277 (57%), Positives = 195/277 (70%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+R+Q+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGALDIGGENPVRIQSMTTTSTDDTEGSVAQAERIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADGYMTPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK++ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYARELQKIEDRLVPFINICKEHHTAVRIGVNHGSLSDRIRNRYGDTPAGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DFH+ + S+K+SN VVMV++ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKHDFHDIVISIKSSNTVVMVRSVRLLVAEMDKEGMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
KSA+GIG LL DG+GDTIRVSL+E PE EI R LA
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEIPVARYLA 285
>gi|327312799|ref|YP_004328236.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
denticola F0289]
gi|326944264|gb|AEA20149.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
denticola F0289]
Length = 641
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 213/564 (37%), Positives = 294/564 (52%), Gaps = 49/564 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+R+Q+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTSVTHVGTLDIGGENPVRIQSMTTTSTDDTEGSVAQAERIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKNINAQLRADGYMTPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 TDEEYARELQKIEDRLVPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPAGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI R+ DFH+ + S+K+SN VVMV++ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRRHDFHDIVISIKSSNTVVMVRSVRLLVAEMDKEGMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI R LA +R E + Y
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEIPVARYLAWY-IRRHEKHLLIPGERYSGFDY 307
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVG-MP 443
+RR G V + G + VS +L P+ +Y V G +P
Sbjct: 308 LRPERRETVAAGNIGGGNVPVVIATRKAGQAAVDVSSPELPKPDYIY-------VQGRLP 360
Query: 444 FKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
+ IL D+DA + L S+ + P+ P A
Sbjct: 361 ENKVKNQKYIL--------DYDAYMELAHGGRQSLENVYPIFPVTGMPFISA-------- 404
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQA-ARRL 562
+ + +V G S E L LK +++ + +++++G +A A +L
Sbjct: 405 --------IDTEVKFLVLKFGTPSEEFLACLKAHPEVVVVC-MTSHQNRLGDQRALAHQL 455
Query: 563 FEYLSENNLNFPVIHHIQFPNG-------------IHRDDLVIGAGTNVGALLVDGLGDG 609
+N + F ++ P ++ + A ++GAL++DGL DG
Sbjct: 456 MIAGVKNPIVFAQMYRHSTPAAEEEPLASQSTAPITPKEQFQLEAAADMGALMMDGLTDG 515
Query: 610 LLLEAPGQ-DFDFLRDTSFNLLQG 632
+ L G D + T+F +LQ
Sbjct: 516 VWLMTDGNLSQDDIEQTAFAILQA 539
>gi|354603198|ref|ZP_09021197.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alistipes
indistinctus YIT 12060]
gi|353349075|gb|EHB93341.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alistipes
indistinctus YIT 12060]
Length = 589
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/327 (47%), Positives = 207/327 (63%), Gaps = 23/327 (7%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
+KYC+S+ R TR V VG+V IG +P+R+Q+MT DT D + +V RIA G +
Sbjct: 2 RKYCDSLTAYARAATRPVAVGSVVIGGGNPVRIQSMTNTDTNDTEASAAQVRRIAGAGGE 61
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
+VR+T QG+REA I+ L ++ ++PLVADIHF P AL AE +K+R+NPGNF
Sbjct: 62 IVRLTAQGRREAANLAAIRARLREEGCSVPLVADIHFVPEAALVAAENVEKVRINPGNFN 121
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
DR QF++L V C+++G A+RIG NHGSLS +M YGD
Sbjct: 122 DRGGQFDRL---------------------VALCREHGTALRIGVNHGSLSAAVMERYGD 160
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P GMV SA E+ +CR+ F + S+K+SN VMVQAYRLL AEM GWDYPLHLGV
Sbjct: 161 TPEGMVASAVEYLALCRERGFDPVVVSLKSSNVRVMVQAYRLLAAEMRERGWDYPLHLGV 220
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
TEAG+ +GR+KSA+GIG LL DGLGDTIRVSLTE PE+EI R+LA+ A E
Sbjct: 221 TEAGDDMEGRIKSAVGIGALLADGLGDTIRVSLTEAPEREIPVARQLADY-FAAREGHAP 279
Query: 374 VAPFEEKHRHYFDFQRRSGQLPIQKEG 400
+ +E ++++RR + P++ G
Sbjct: 280 IPAVDESFYSPYEYRRRRSE-PVEGVG 305
>gi|189462027|ref|ZP_03010812.1| hypothetical protein BACCOP_02704 [Bacteroides coprocola DSM 17136]
gi|189431241|gb|EDV00226.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
coprocola DSM 17136]
Length = 614
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 197/550 (35%), Positives = 282/550 (51%), Gaps = 52/550 (9%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+ V VG +G +PIR+Q+MT T D VE+ RI + G + VR+T QG RE
Sbjct: 8 RREANEVYVGATPMGGTNPIRIQSMTNTVTMDTEACVEQAKRIIEAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PL+AD+HF P VA A + +R+NPGN+ D F++LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLIADVHFNPKVAEVAALYAEGVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I + F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIRDRFIPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F N + S+KASN VVMV+ RLL +M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEQFMNVVISIKASNTVVMVKTVRLLAEQMEKEGMSFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLCDGLGDTIRVSLSEAPEAEIPVARKLVD---------------------- 285
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+ QR + E E +Y R + + ++ + + ++A+L M
Sbjct: 286 YVLQRENHPYIPGAEAAEFNYTNPNRRHTTAVENIGGEHVPV------VISARLDGNMQI 339
Query: 445 KDLATVDSILL-RELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
+ D I ++LP + R + +VD ++ E+ T P + LV L
Sbjct: 340 NEQFCPDYIYCGQQLPEM----RRTNIGYIVDANIW----KGEEGTYPAFNYQQLVELHH 391
Query: 504 LSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLF 563
+ L L EE + +++ + +++G R +
Sbjct: 392 CNAKVKFLFTPYMGL---------NEEATACLRMHPEVVIIAQSNHPNRLGEF---RGIA 439
Query: 564 EYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQDF--DF 621
L L P++ QF + +DL I + ++GAL+ DG DG+LL G +
Sbjct: 440 HQLMNQGLTNPLV-FFQFYQENNTEDLQIKSAVDMGALIFDGFCDGILLYNHGNAITDEK 498
Query: 622 LRDTSFNLLQ 631
+ +T+F +LQ
Sbjct: 499 VDETAFGILQ 508
>gi|339625705|ref|YP_004717184.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2c]
gi|339460545|gb|AEJ77048.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlamydia
trachomatis L2c]
Length = 568
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 139/249 (55%), Positives = 178/249 (71%)
Query: 109 MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168
MTT T DV GTV ++ + + G D+VR+TVQG RE AC IK+ L+Q+N +IPLVADI
Sbjct: 1 MTTTATTDVDGTVRQICALQELGCDIVRVTVQGLREVHACEHIKDRLIQQNISIPLVADI 60
Query: 169 HFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK 228
HF P A+ V +C DK+R+NPGN+ D+R F Y+D++Y L+H+ FSPLVEKCK
Sbjct: 61 HFFPQAAIHVVDCVDKVRINPGNYVDKRNMFTGKIYSDEQYAHSLEHLMNKFSPLVEKCK 120
Query: 229 KYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVV 288
+ G+A+RIG NHGSLS+R+ YG++ GMV SA E+A +C +D+H+ +FSMK+SNP V
Sbjct: 121 RLGKAMRIGVNHGSLSERVTQRYGNTIEGMVYSALEYAEVCVAMDYHDVIFSMKSSNPKV 180
Query: 289 MVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE 348
MV AYR L E+ W YPLHLGVTEAG G G +KSA+GIGTLL +GLGDTIR SLT
Sbjct: 181 MVAAYRSLAYELDQREWSYPLHLGVTEAGSGTAGIVKSAVGIGTLLSEGLGDTIRCSLTG 240
Query: 349 PPEKEIDPC 357
P EI C
Sbjct: 241 SPINEIPIC 249
>gi|399155434|ref|ZP_10755501.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [SAR324
cluster bacterium SCGC AAA001-C10]
Length = 388
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/314 (48%), Positives = 206/314 (65%), Gaps = 2/314 (0%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
RR T TV +G++ IG P+R+Q+M T+DT +V +EE+ + +++R+TV ++
Sbjct: 4 TRRYTNTVSIGSIKIGGSEPVRIQSMLTSDTTNVESCIEEIAGLDAVDCEIIRLTVPNQK 63
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
D+ EI+ + ++ PLVADIHF P +A+ V E +K+R+NPGN+ DR+ +FE E
Sbjct: 64 SIDSLPEIRTEMKKRGIERPLVADIHFNPQLAVNVCEFVEKVRINPGNYVDRK-KFEVRE 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD +YQ+EL+ +EE PL++ KKYG A+RIGTNHGSLSDR+M+ +GDSP GMVESA
Sbjct: 123 YTDMQYQEELERVEEKLLPLIQNLKKYGCALRIGTNHGSLSDRLMNRFGDSPEGMVESAM 182
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RI RK +F + SMK+SNP+VM+++YR LV M YPLHLGVTEAG DGR
Sbjct: 183 EFLRILRKHNFEETVLSMKSSNPLVMIESYRQLVRVMDDENMHYPLHLGVTEAGNELDGR 242
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRH 383
+KSA+GIG LL DG GDTIRVSLTEP E EI P R R+ R
Sbjct: 243 IKSAVGIGALLCDGFGDTIRVSLTEPSENEI-PVARSILQSTRSRIFNADFISCPSCGRT 301
Query: 384 YFDFQRRSGQLPIQ 397
+FD + + Q+ +
Sbjct: 302 FFDLESTTEQIKVH 315
>gi|423230211|ref|ZP_17216615.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei CL02T00C15]
gi|423243924|ref|ZP_17224999.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei CL02T12C06]
gi|392631720|gb|EIY25689.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei CL02T00C15]
gi|392643442|gb|EIY37192.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei CL02T12C06]
Length = 614
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 189/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRKSSEVHIGGTPLGGNNPIRIQSMTNTITMDTEACVEQAKRIIDVGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F +LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFVPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVEEMEKENMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KS++GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSSLGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
>gi|265754723|ref|ZP_06089775.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_33FAA]
gi|345514560|ref|ZP_08794071.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei 5_1_36/D4]
gi|423241060|ref|ZP_17222174.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei CL03T12C01]
gi|229436628|gb|EEO46705.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei 5_1_36/D4]
gi|263234837|gb|EEZ20405.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 3_1_33FAA]
gi|392643122|gb|EIY36880.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei CL03T12C01]
Length = 614
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 189/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRKSSEVHIGGTPLGGNNPIRIQSMTNTITMDTEACVEQAKRIIDVGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F +LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFVPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVEEMEKENMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KS++GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSSLGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
>gi|307564752|ref|ZP_07627280.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
amnii CRIS 21A-A]
gi|307346474|gb|EFN91783.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
amnii CRIS 21A-A]
Length = 636
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 300/558 (53%), Gaps = 45/558 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ VGN+ IG ++P+R+Q+MTT T D +VE+ RI G +LVR+T QGKRE
Sbjct: 11 RRKSTVTHVGNLNIGGDNPVRIQSMTTTSTDDTIASVEQCKRIIKAGGELVRLTTQGKRE 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I +L + ++ PL AD+HF +VA A K+R+NPGN+ D F++LEY
Sbjct: 71 AENLKNINETLRAEGFDTPLCADVHFNANVADVAAITTAKVRINPGNYVDPARTFKKLEY 130
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ IE+ P ++ CK+ AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 131 TDEEYAQELQKIEDRLVPFIKICKENKTAVRIGVNHGSLSDRIRNRYGDTPAGIVESCME 190
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DF++ + S+K+SN VVMV + RLLVAEM YPLHLGVTEAGEGEDGR+
Sbjct: 191 FLRIFRKYDFNDVVISIKSSNTVVMVLSVRLLVAEMDKENMHYPLHLGVTEAGEGEDGRI 250
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PEKEI P + +R E + K+ Y
Sbjct: 251 KSAVGIGALLADGIGDTIRVSLSEEPEKEI-PVANHLSWYLRRHEKHIMIPAEVNKYFDY 309
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+ RR + G+ V V+ + S D ++ + GMP
Sbjct: 310 LNPTRRKTVAAVNVGGDNVPV---------VIATRSTDN---------AVQQIRINGMPI 351
Query: 445 KDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQEL 504
D + L EL DD K ++D ++ + S + +P++ + +
Sbjct: 352 PDYIYIQGKLPEEL---DDKQ-----KYIIDYNVYIDLVNSGK----MPNSNIYPIFPVM 399
Query: 505 STGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFE 564
L+ + +V G + E L+ +++ + +++++G R
Sbjct: 400 GQVFIGLIQAPIKFLVLKYGTPTDEFFACLR-YHPEVVVVCMTTHQNRLGD---QRAFAH 455
Query: 565 YLSENNLNFPVIHHIQFPNGIH---------RDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
L L P+I + + I+ ++ I A ++GAL++DGL DG+ L
Sbjct: 456 QLMNEGLTNPIIFSQMYEHFINEKCCEGISAKEKFQIEAAADMGALMIDGLVDGVWLMNK 515
Query: 616 GQ-DFDFLRDTSFNLLQG 632
G D + T+F++LQ
Sbjct: 516 GDIPQDDVEQTAFSILQA 533
>gi|237709516|ref|ZP_04539997.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 9_1_42FAA]
gi|229456572|gb|EEO62293.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. 9_1_42FAA]
Length = 614
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 189/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +G +G +PIR+Q+MT T D VE+ RI D G + VR+T QG RE
Sbjct: 8 RRKSSEVHIGGTPLGGNNPIRIQSMTNTITMDTEACVEQAKRIIDVGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P VA A+ +K+R+NPGN+ D F +LEY
Sbjct: 68 AENLKNINIGLRSQGYDTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E++ I F P + CK+ A+RIG NHGSLSDRIMS+YGD+P GMVES E
Sbjct: 128 TDEEYAQEIEKIRARFVPFLNICKENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F++ + S+KASN VVMV+ RLLV EM +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVAEHFNDVVISIKASNTVVMVRTVRLLVEEMEKENMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KS++GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSSLGIGALLADGLGDTIRVSLSEAPENEIPVARKLVD 285
>gi|154490022|ref|ZP_02030283.1| hypothetical protein PARMER_00251 [Parabacteroides merdae ATCC
43184]
gi|423723022|ref|ZP_17697175.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides merdae CL09T00C40]
gi|154089464|gb|EDN88508.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides merdae ATCC 43184]
gi|409241852|gb|EKN34619.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides merdae CL09T00C40]
Length = 613
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 195/558 (34%), Positives = 275/558 (49%), Gaps = 66/558 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +GN +G ++PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 9 RRKSSIVNIGNTPLGGDNPIRIQSMANVSTMDTDAAVCQAIRMIEAGAEYVRFTAQGERE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I+ L + Y PLVADIHF P A AE +K+R+NPGN+ D+ F+ EY
Sbjct: 69 ARNLGVIRKQLSEAGYTTPLVADIHFNPRAADAAAEEVEKVRINPGNYVDKVKTFDLQEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 129 TDEEYAAELQKIRDRFIPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR +F + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICRDENFPDVVISIKASNTVVMVKTVRLLVRTMEAEDMYYPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMR-------AAELQQGVAPF 377
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L + + A G P
Sbjct: 249 KSAVGIGALLSDGIGDTIRVSLSEDPEAEIPVARKLVDYILEREGHEPVEASPAPGYDPV 308
Query: 378 EEKHRHYFDFQRRSGQLP--IQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLA 435
RH +R G P + + D+ D P+ +Y +
Sbjct: 309 TADRRHSRVAERIGGNFPPVVISDRSNGDF--------------EFDHASQPDYIY--IG 352
Query: 436 AKLVVGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHA 495
+ +P VD+ +E P+ + + + E +P
Sbjct: 353 KEDPENLPDNFRLLVDAHFWKERPNA--------------YPFFIASEIDELKDYSVPLK 398
Query: 496 MVLVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGR 555
+ + ++L+ ++L + ++V L + + I
Sbjct: 399 FIRLTYRDLTDRVIEVLKQDKSVIVILS-----------------------THHRNGIAA 435
Query: 556 VQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAP 615
+AA +L + PVI H + + L + A + G LL+DG GDG++L
Sbjct: 436 ERAA---MHHLLAAGCDVPVILHRDYRE-TDIEALQLKAAVDFGTLLLDGFGDGIMLHNE 491
Query: 616 GQDFDFLRDTSFNLLQGV 633
G + F +LQ
Sbjct: 492 GCETMVTDSCMFGILQAT 509
>gi|224025251|ref|ZP_03643617.1| hypothetical protein BACCOPRO_01985 [Bacteroides coprophilus DSM
18228]
gi|224018487|gb|EEF76485.1| hypothetical protein BACCOPRO_01985 [Bacteroides coprophilus DSM
18228]
Length = 618
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 188/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ V VG +G +PIR+Q+MT T D +E+ RI D G + VR+T QG RE
Sbjct: 8 RRQSNEVYVGATPMGGANPIRIQSMTNTVTMDTEACIEQAKRIIDAGGEYVRLTTQGVRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L ++ Y PLVAD+HF P VA A +K+R+NPGN+ D F++LEY
Sbjct: 68 AENLKNINAGLREQGYMAPLVADVHFNPKVADVAALYAEKVRINPGNYVDAARTFKKLEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +E+Q I F P ++ CK+ A+RIG NHGSLSDRIMS YGD+P GMVES E
Sbjct: 128 TDEEYAQEIQKIRARFVPFLQICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC F + + S+KASN VVMV+ RLL +M G +PLHLGVTEAG+GEDGR+
Sbjct: 188 FLRICVDEQFSDVVISIKASNTVVMVKTVRLLAEQMEKEGMAFPLHLGVTEAGDGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DGLGDTIRVSL+E PE EI R+L +
Sbjct: 248 KSALGIGALLSDGLGDTIRVSLSEAPEAEIPVARKLVD 285
>gi|317504399|ref|ZP_07962383.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
salivae DSM 15606]
gi|315664521|gb|EFV04204.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
salivae DSM 15606]
Length = 613
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 146/278 (52%), Positives = 192/278 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T TV +G + +GS+ P+RVQ+MTT +T D V + I G +LVR+T QGKRE
Sbjct: 10 RRETSTVHIGAIDMGSDFPVRVQSMTTTNTNDTEACVRQAEEIIKAGGELVRLTTQGKRE 69
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y PLVAD+HF P+VA A +K+R+NPGN+ D +F + EY
Sbjct: 70 AENLKNINAQLRSEGYTTPLVADVHFNPNVADVAALYAEKVRINPGNYVDPARKFIKQEY 129
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY EL+ IE+ P + CK A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 130 TDEEYAAELKKIEDRLIPFLNICKANHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 189
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F R+C++ +F + + S+K+SN VVMV++ RLLV +M G +YPLHLGVTEAGEGEDGR+
Sbjct: 190 FLRVCKRENFTDVVISIKSSNTVVMVRSVRLLVHQMDKEGMNYPLHLGVTEAGEGEDGRI 249
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E P EI R L +
Sbjct: 250 KSAVGIGALLSDGIGDTIRVSLSEEPAAEIPVARHLVD 287
>gi|429740137|ref|ZP_19273844.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
saccharolytica F0055]
gi|429154186|gb|EKX96931.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
saccharolytica F0055]
Length = 609
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 297/548 (54%), Gaps = 54/548 (9%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G ++PIRVQ+MTT DT + V + RI G +LVR+T QGKREA+ I ++L
Sbjct: 1 MGGDYPIRVQSMTTTDTNNTDACVAQAERIIGAGGELVRLTTQGKREAENLKPIHDALRA 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
K Y+ PLVAD+HF +VA A +K+R+NPGN+ D F+ LEYTD+ Y E++ IE
Sbjct: 61 KGYDTPLVADVHFNANVADVAARYTEKVRINPGNYVDPGRTFKVLEYTDEAYADEIKKIE 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
F P ++ CK+ AVRIG NHGSLSDRIMS YGD+P G+VES EF R C++ DF++
Sbjct: 121 NRFVPFLQICKENHTAVRIGVNHGSLSDRIMSRYGDTPEGIVESCMEFLRFCKREDFNDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN VVMV++ RLLV EM G +YPLHLGVTEAGEGEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVVMVRSVRLLVHEMEREGMNYPLHLGVTEAGEGEDGRIKSAVGIGALLGDG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQQGVAPFEEKHRHYFDFQRRSGQLPI 396
+GDTIRVSL+E PE EI R L N + R L P K +Y +RR P+
Sbjct: 241 IGDTIRVSLSEEPEAEIPVARALVNYISARGKHLPIPAEP--AKSFNYLSPERRE-TTPV 297
Query: 397 QKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLR 456
G E + V++S +D+ K + L+ D + S L
Sbjct: 298 GNIGGE---------NVPVVISNRMDKDKVHIVTNADLSP---------DYLYIGSQLPE 339
Query: 457 ELPS----VDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQELSTGAYKLL 512
+ + D+DA + + G++T + Q PH V L+
Sbjct: 340 QFNPQRRYIIDYDAHMQAE-----EKGLLTGV--QAYPIFPHNAVPF---------ISLV 383
Query: 513 PEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARRLFEYLSENNLN 572
+ +V G +S E L L+ +++ + +++K G R L L +NL
Sbjct: 384 KADLKFLVLQYGADSDEYLACLRHHPEIVVVC-MSNHQNKTGD---QRALVHELMAHNLY 439
Query: 573 FPVIHHIQFPNGI-HRDDLVIGAGTNVGALLVDGLGDGLLLEAPG----QDFDFLRDTSF 627
PV+ + + + D + A ++GAL++DGL DG+ L G +D D T+F
Sbjct: 440 NPVVFAQMYRHSQEEKADFQLEAAADMGALMIDGLTDGVWLMNQGDLSDEDIDA---TAF 496
Query: 628 NLLQGVCL 635
+LQ L
Sbjct: 497 GVLQAARL 504
>gi|423346455|ref|ZP_17324143.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides merdae CL03T12C32]
gi|409220273|gb|EKN13229.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Parabacteroides merdae CL03T12C32]
Length = 613
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 157/318 (49%), Positives = 198/318 (62%), Gaps = 7/318 (2%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V +GN +G ++PIR+Q+M T D V + +R+ + GA+ VR T QG+RE
Sbjct: 9 RRKSSIVNIGNTPLGGDNPIRIQSMANVSTMDTDAAVCQAIRMIEAGAEYVRFTAQGERE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I+ L + Y PLVADIHF P A AE +K+R+NPGN+ D+ F+ EY
Sbjct: 69 ARNLGVIRKQLSEAGYTTPLVADIHFNPRAADAAAEEVEKVRINPGNYVDKVKTFDLQEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY ELQ I + F P + CK +G A+RIG NHGSLSDRIMS YGD+P GMV S E
Sbjct: 129 TDEEYAAELQKIRDRFIPFLNICKAHGTAIRIGVNHGSLSDRIMSRYGDTPEGMVASCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RICR +F + + S+KASN VVMV+ RLLV M YPLHLGVTEAG+GEDGR+
Sbjct: 189 FLRICRDENFPDVVISIKASNTVVMVKTVRLLVRTMEAEDMYYPLHLGVTEAGDGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMR-------AAELQQGVAPF 377
KSA+GIG LL DG+GDTIRVSL+E PE EI R+L + + A G P
Sbjct: 249 KSAVGIGALLSDGIGDTIRVSLSEDPEAEIPVARKLVDYILEREGHEPVEASPAPGYDPV 308
Query: 378 EEKHRHYFDFQRRSGQLP 395
RH +R G P
Sbjct: 309 TADRRHSRVTERIGGNFP 326
>gi|270295400|ref|ZP_06201601.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D20]
gi|270274647|gb|EFA20508.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
sp. D20]
Length = 602
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 146/265 (55%), Positives = 184/265 (69%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D +V + RI D G + VR+T QG +EA+ I L Q
Sbjct: 1 MGGSNPIRIQSMTNTATQDTEASVAQAKRIVDAGGEYVRLTAQGIKEAENLMNINIGLRQ 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +ELQ I
Sbjct: 61 DGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEYTDEEYAQELQKIH 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC + +F +
Sbjct: 121 DRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVQENFTDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVVMVKTVRLLAAVMEQEGMRFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN 362
LGDTIRVSL+E PE EI R+L +
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLVD 265
>gi|383810805|ref|ZP_09966293.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 306 str. F0472]
gi|383356653|gb|EID34149.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
sp. oral taxon 306 str. F0472]
Length = 644
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/277 (55%), Positives = 194/277 (70%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+R+Q+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTTVAHVGALNIGGENPVRIQSMTTTSTDDTEGSVAQAKRIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L YN PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLQHINAGLRAAGYNTPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+V S E
Sbjct: 129 TDEEYAQELKKIEDRLVPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPEGIVASCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK +FH+ + S+K+SN VVMV++ RLLV+EM G YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRIFRKYNFHDVVISIKSSNTVVMVRSVRLLVSEMEKEGMTYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
KSA+GIG LL DG+GDTIRVSL+E PE EI + LA
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEIPVAKYLA 285
>gi|298373205|ref|ZP_06983195.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroidetes
oral taxon 274 str. F0058]
gi|298276109|gb|EFI17660.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroidetes
oral taxon 274 str. F0058]
Length = 384
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/270 (51%), Positives = 193/270 (71%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V VGN+ IG +P+RVQTMT DT D+ G+VE++ R GA+++R+T QG+RE
Sbjct: 3 RRQTIEVRVGNIGIGGSNPVRVQTMTNTDTNDIEGSVEQIKRCVAAGAEIIRLTTQGERE 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
++ EIK L +PLVAD+HF+ SVAL+ A DK+R+NPGNF + +Y
Sbjct: 63 VNSVAEIKRRLAAVGIVVPLVADVHFSSSVALKAACVVDKVRINPGNFIKPIKKDFTTDY 122
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+E+++E + E F ++ CKK+ AVRIG NHGSL +R+M+ YGD+P GM ES E
Sbjct: 123 TDEEFEQERLVLRERFVEFLDVCKKHRTAVRIGVNHGSLGERMMNRYGDTPMGMAESCLE 182
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
R+CR+ +F + S+KASN V+M++A +LLV +M + +PLHLGVTEAG+GEDGR+
Sbjct: 183 LLRMCRQENFDQIVISLKASNTVLMIEAVKLLVEKMDAEDFHFPLHLGVTEAGDGEDGRI 242
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
KSA+GIG+LL G+GDTIRVSL+EPPE EI
Sbjct: 243 KSAVGIGSLLAVGIGDTIRVSLSEPPEAEI 272
>gi|160891501|ref|ZP_02072504.1| hypothetical protein BACUNI_03952 [Bacteroides uniformis ATCC 8492]
gi|156858908|gb|EDO52339.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
uniformis ATCC 8492]
Length = 602
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/265 (54%), Positives = 183/265 (69%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D +V + RI D G + VR+T QG +EA+ I L Q
Sbjct: 1 MGGSNPIRIQSMTNTATQDTEASVAQAKRIVDAGGEYVRLTAQGIKEAENLMNINIGLRQ 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +ELQ I
Sbjct: 61 DGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEYTDEEYAQELQKIH 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC + +F +
Sbjct: 121 DRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVQENFTDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN VVMV+ RLL M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVVMVKTVRLLATVMEQEGMRFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN 362
LGDTIRVSL+E PE EI R+L +
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLVD 265
>gi|299142083|ref|ZP_07035217.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oris C735]
gi|298576545|gb|EFI48417.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oris C735]
Length = 611
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 189/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT TV +G + +GSE+P+RVQ+MTT +T D V++ I G +LVR+T QG RE
Sbjct: 10 RRKTSTVHIGAIDMGSEYPVRVQSMTTTNTNDTEACVKQAEEIIKAGGELVRLTTQGTRE 69
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PLVAD+HF P+VA A +K+R+NPGN+ D +F + EY
Sbjct: 70 AENLKPINAQLRADGYTTPLVADVHFNPNVADVAALYAEKVRINPGNYVDPARKFIKQEY 129
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY EL+ IE+ P + CK AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 130 TDEEYAAELKKIEDRLIPFLNICKANHTAVRIGVNHGSLSDRIRNRYGDTPEGIVESCME 189
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI ++ F N + S+KASN ++MV++ RLLV M G +YPLHLGVTEAGEGEDGR+
Sbjct: 190 FLRIFKREKFDNVVISIKASNTIIMVRSVRLLVETMDKEGMNYPLHLGVTEAGEGEDGRI 249
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E P EI R L +
Sbjct: 250 KSAVGIGALLADGIGDTIRVSLSEEPAAEIPVARHLVD 287
>gi|254526525|ref|ZP_05138577.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9202]
gi|221537949|gb|EEE40402.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9202]
Length = 405
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/294 (51%), Positives = 201/294 (68%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG+VAIGS++P+RVQ+M DT DV + R+ D G ++VR+TV
Sbjct: 22 RRITRTVMVGDVAIGSDYPVRVQSMINEDTMDVENAYLAIKRLHDVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N N PLVAD+H +A+ VA+ DK+R+NPG F ++ + E
Sbjct: 82 AKAVGDIKEKLLENNINTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+E++ Q I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDEEFETIKQTILKRFTPLVEVLKAENKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMMAAYRMIADRLDSEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
>gi|126696067|ref|YP_001090953.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9301]
gi|126543110|gb|ABO17352.1| GcpE protein [Prochlorococcus marinus str. MIT 9301]
Length = 405
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/294 (51%), Positives = 201/294 (68%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG+VAIGS++P+RVQ+M DT DV + R+ D G ++VR+TV
Sbjct: 22 RRITRTVMVGDVAIGSDYPVRVQSMINEDTMDVENAYLAIKRLHDVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N N PLVAD+H +A+ VA+ DK+R+NPG F ++ + E
Sbjct: 82 AKAVGDIKAKLLENNINTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPARTE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+E++ Q I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDEEFETIKQTILKRFTPLVEVLKAENKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMMAAYRMIADRLDSEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
>gi|157413096|ref|YP_001483962.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9215]
gi|157387671|gb|ABV50376.1| GcpE protein [Prochlorococcus marinus str. MIT 9215]
Length = 405
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 201/294 (68%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG++AIGS++P+RVQ+M DT DV + R+ D G ++VR+TV
Sbjct: 22 RRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVENAYLAIKRLHDVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N N PLVAD+H +A+ VA+ DK+R+NPG F ++ + E
Sbjct: 82 AKAVGDIKAKLLENNINTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+E++ Q I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDEEFETIKQTILKRFTPLVEVLKAENKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMMAAYRMIADRLDSEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
>gi|123968266|ref|YP_001009124.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. AS9601]
gi|123198376|gb|ABM70017.1| GcpE protein [Prochlorococcus marinus str. AS9601]
Length = 405
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 201/294 (68%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG++AIGS++P+RVQ+M DT DV + R+ D G ++VR+TV
Sbjct: 22 RRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVENAYLAIKRLHDVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N N PLVAD+H +A+ VA+ DK+R+NPG F ++ + E
Sbjct: 82 AKAVGDIKAKLLENNINTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+E++ Q I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDEEFETIKQTILKRFTPLVEVLKAENKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMMAAYRMIADRLDSEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
>gi|373460579|ref|ZP_09552330.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
maculosa OT 289]
gi|371955197|gb|EHO73001.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
maculosa OT 289]
Length = 619
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/287 (53%), Positives = 188/287 (65%), Gaps = 1/287 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T TV VG + +GSE PIRVQ+MTT +T D V + I + G +LVR+T QG RE
Sbjct: 10 RRETTTVHVGAIDMGSEFPIRVQSMTTTNTNDTEACVRQAEEIIEAGGELVRLTTQGTRE 69
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PLVAD+HF P+VA A +K+R+NPGN+ D +F EY
Sbjct: 70 AENLKHINAQLRADGYQTPLVADVHFNPNVADVAALYAEKVRINPGNYVDPARKFIVHEY 129
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+ Y EL I++ F P + CK AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 130 TDEAYATELNKIDDRFVPFLNICKANHTAVRIGVNHGSLSDRIRNRYGDTPAGIVESCME 189
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ F N + S+K+SN V+MV A RLLV M G YPLHLGVTEAGEGEDGR+
Sbjct: 190 FLRICKRESFDNVVISIKSSNTVIMVLAVRLLVDRMAKEGIKYPLHLGVTEAGEGEDGRI 249
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAEL 370
KSA+GIG LL DG+GDTIRVSL+E P EI R L +G R L
Sbjct: 250 KSAVGIGALLADGIGDTIRVSLSEEPAAEIPVARHLVEYIGRREGHL 296
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 560 RRLFEYLSENNLNFPVIHHIQFPN-GIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ- 617
R L + EN ++ PV+ + + + D + A ++GAL++DGL DGL L G
Sbjct: 435 RALVHEMWENGVHNPVVFAQMYRHTAAEKSDFQLEAAADMGALMIDGLTDGLWLMNDGDL 494
Query: 618 DFDFLRDTSFNLLQGVCL 635
+ DTSF +LQ L
Sbjct: 495 SQSVITDTSFGILQAARL 512
>gi|373500768|ref|ZP_09591141.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
micans F0438]
gi|371951726|gb|EHO69569.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
micans F0438]
Length = 635
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/276 (56%), Positives = 192/276 (69%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT V VG + IG ++P+R+Q+MTT T D + + RI D G +LVR+T QG+RE
Sbjct: 10 RRKTSVVHVGCLDIGGDNPVRIQSMTTTSTDDTEASTAQTERIVDAGGELVRLTTQGRRE 69
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y P+ AD+HF +VA A +K+R+NPGN+ D F+Q++Y
Sbjct: 70 AENLRNIIAQLRADGYTTPICADVHFNANVADVAALYAEKVRINPGNYVDPGRTFKQIDY 129
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +ELQ +E ++ CK+ G AVRIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 130 TDEEYSRELQKLEARLVQFIDICKQNGTAVRIGVNHGSLSDRIMSRYGDTPVGIVESCME 189
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI RK DF N + S+KASN VVMVQ+ RLLVAEM G YPLHLGVTEAGEGEDGR+
Sbjct: 190 FLRIFRKHDFANVVISIKASNTVVMVQSVRLLVAEMDKAGMSYPLHLGVTEAGEGEDGRI 249
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+GIG LL DG+GDTIRVSL+E PE EI R L
Sbjct: 250 KSALGIGALLSDGIGDTIRVSLSEEPECEIPVARHL 285
>gi|260591970|ref|ZP_05857428.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
veroralis F0319]
gi|260536254|gb|EEX18871.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
veroralis F0319]
Length = 644
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/277 (55%), Positives = 194/277 (70%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT VG + IG E+P+R+Q+MTT T D G+V + RI D G +LVR+T QGKRE
Sbjct: 9 RRKTTVAHVGALNIGGENPVRIQSMTTTSTDDTEGSVAQAKRIIDAGGELVRLTTQGKRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L YN PL AD+HF +VA A +K+R+NPGN+ D F++LEY
Sbjct: 69 AENLKHINAKLRAAGYNTPLCADVHFNANVADVAALYAEKVRINPGNYVDPARTFKKLEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IE+ P + CK+ AVRIG NHGSLSDRI + YGD+P G+V S E
Sbjct: 129 TDEEYAQELKKIEDRLVPFINICKENHTAVRIGVNHGSLSDRIRNRYGDTPEGIVASCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F I RK +FH+ + S+K+SN VVMV++ RLLV+EM G +YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLHIFRKHNFHDVVISIKSSNTVVMVRSVRLLVSEMEKEGMNYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
KSA+GIG LL DG+GDTIRVSL+E PE EI + LA
Sbjct: 249 KSAVGIGALLADGIGDTIRVSLSEEPECEIPVAKYLA 285
>gi|78184752|ref|YP_377187.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CC9902]
gi|123581465|sp|Q3AXP3.1|ISPG_SYNS9 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|78169046|gb|ABB26143.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CC9902]
Length = 401
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 154/305 (50%), Positives = 203/305 (66%), Gaps = 5/305 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG+V IGSEHPI VQ+M DT D+ G+V ++R+ D G +
Sbjct: 6 RRYDTQIH---RRVTRTVMVGSVPIGSEHPIAVQSMINEDTLDIDGSVAGIIRLVDAGCE 62
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+T A A +IK L K N+PLVAD+H +AL VA+ DK+R+NPG F
Sbjct: 63 IVRVTTPSIGHAKAMGKIKAELSAKGCNVPLVADVHHNGTKIALEVAQHVDKVRINPGLF 122
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E+T+ E+ + I E F PLV+ ++ +A+RIG NHGSL++R++ YG
Sbjct: 123 VFDKPDPNRQEFTESEFAEIGTRIRETFEPLVKLLREQNKALRIGVNHGSLAERMLFTYG 182
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P+GMVESA EF RIC LDFHN + SMKAS VM+ AYRL+ M G++YPLHLG
Sbjct: 183 DTPKGMVESAMEFVRICDDLDFHNIVISMKASRAPVMLSAYRLMADTMDQEGFNYPLHLG 242
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
VTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L +LG+R ++
Sbjct: 243 VTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVE 302
Query: 372 QGVAP 376
P
Sbjct: 303 YIACP 307
>gi|401406670|ref|XP_003882784.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, related
[Neospora caninum Liverpool]
gi|325117200|emb|CBZ52752.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, related
[Neospora caninum Liverpool]
Length = 1294
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 166/347 (47%), Positives = 207/347 (59%), Gaps = 72/347 (20%)
Query: 76 YCESIHKTVRRKTRTVMVGN-------------------------------VAIGSEHPI 104
YC S T R TRTV+VG V IG HP+
Sbjct: 342 YCVSTASTQRLSTRTVVVGRGALAAPYHDFFASSSSSSSLTPPGSWREGYPVLIGGSHPL 401
Query: 105 RVQTMTTNDTKDVAGTVEE------------VMRIADQGAD-----LVRITVQGKREADA 147
VQTMT +DT+DV TVE+ +R++ + + +VR+TVQG +E +A
Sbjct: 402 VVQTMTNSDTRDVQATVEQASPAAFGPTRRDTLRLSAELSCGPRTFMVRMTVQGMKEVEA 461
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFE-QLEYT- 205
IK L + N IPLVAD+HF P V L AE FDK+R+NPGNFAD ++E ++E
Sbjct: 462 SKFIKEKLDKANLRIPLVADVHFQPRVGLAAAEIFDKVRINPGNFADGAKKWEDEVESAT 521
Query: 206 ------------------DDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI 247
DD +++ IEE+ PL+EKCK + A+RIGTNHGSLS RI
Sbjct: 522 GSNLPDERRREAEAERRFDDGHKR----IEELLVPLIEKCKTFNTAMRIGTNHGSLSARI 577
Query: 248 MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
+ YGD+PRGMV SAFEFA IC + F NF FSMK+SNP VMV AYRLL +EM +
Sbjct: 578 LRRYGDTPRGMVASAFEFADICVRESFRNFCFSMKSSNPRVMVHAYRLLASEMLRRNELF 637
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
P+HLGVTEAGEGEDGR+KSA+GIG LLQDG+GDT+RVSLTEPP +EI
Sbjct: 638 PIHLGVTEAGEGEDGRLKSAVGIGALLQDGIGDTLRVSLTEPPWREI 684
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 42/158 (26%)
Query: 376 PFEEKHRHYFDFQRRS--------------------GQLPIQKEGEEVDYRGVLHRDGSV 415
PFEE+ R++ + ++R+ G+ Q+ G+E +LHRDG+V
Sbjct: 790 PFEERTRNFENIEKRTIRPLFSRSRATQADTDGKGEGEPESQRTGDER----ILHRDGTV 845
Query: 416 LMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDSILLR--ELPSVDD--------HD 465
++ VS L+ PE+ YK+L K+V G PF+ +A+VDSI L LPS +
Sbjct: 846 MVRVSPAMLEVPEVFYKALGCKVVGGKPFRSIASVDSIYLPSLSLPSQQEGRGLVARAAQ 905
Query: 466 ARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNLQE 503
AR L L + +GV+ P P LV+LQ+
Sbjct: 906 ARETLHALQEAGVGVLV--------PFPDLAYLVSLQK 935
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 591 VIGAGTNVGALLVDGLGDGLLLEAPGQDFDFLRDTSFNLLQGVCLMS 637
I AG VG+LLVD LG+G+L++ PG FNLLQ L S
Sbjct: 1139 AIYAGWEVGSLLVDALGEGVLVDLPGLSLPRQIRLGFNLLQACRLRS 1185
>gi|323343691|ref|ZP_08083918.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oralis ATCC 33269]
gi|323095510|gb|EFZ38084.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oralis ATCC 33269]
Length = 612
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 158/336 (47%), Positives = 210/336 (62%), Gaps = 19/336 (5%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + V +G + +G ++ IRVQ+MTT DT D G + + RI G +LVR+T QG RE
Sbjct: 9 RRPSSVVHIGAIDMGGDNAIRVQSMTTTDTNDTEGCIAQAERIIKAGGELVRLTTQGIRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + Y+ PLVAD+HF P+VA A +K+R+NPGN+ D +F + EY
Sbjct: 69 AENLKNINAGLRARGYDTPLVADVHFNPNVADVAALYAEKVRINPGNYVDPARRFIKQEY 128
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+D+EY +EL IE F P + CK+ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 129 SDEEYAQELHKIEARFVPFINICKQNHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 188
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K F N + S+KASN V+MV++ RLLV M YPLHLGVTEAGEGEDGR+
Sbjct: 189 FLRICKKERFSNVVISVKASNTVIMVRSVRLLVDRMDKEDMHYPLHLGVTEAGEGEDGRI 248
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDT+RVSL+E PE EI + L + +QG +
Sbjct: 249 KSAVGIGALLADGIGDTVRVSLSEEPEMEIPVAQHLVEYVTK----RQGHLVVPAERYAN 304
Query: 385 FDF----QRRS--------GQLPI---QKEGEEVDY 405
FD+ +RR+ G +P+ KEG + DY
Sbjct: 305 FDYLRPERRRTVPVRNIGGGNVPVVITSKEGAKSDY 340
>gi|189465297|ref|ZP_03014082.1| hypothetical protein BACINT_01645 [Bacteroides intestinalis DSM
17393]
gi|189437571|gb|EDV06556.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
intestinalis DSM 17393]
Length = 593
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/269 (53%), Positives = 185/269 (68%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D +V + I + G + VR+T QG +EA+ I L +
Sbjct: 1 MGGSNPIRIQSMTNTATQDTEASVAQAKLIVNAGGEYVRLTAQGIKEAENLMNINAGLRR 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVADIHF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +ELQ I
Sbjct: 61 DGYMVPLVADIHFNPKVADVAAQYVEKVRINPGNYVDAARTFKHLEYTDEEYAQELQKIH 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK+ A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC K +F +
Sbjct: 121 DRFVPFLNICKENHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICIKENFTDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN VVMV+ RLL A M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVVMVKTVRLLAAVMEKEGMQFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLANLGMR 366
LGDTIRVSL+E PE EI R+L + M+
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLVDYIMQ 269
>gi|113952754|ref|YP_730878.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CC9311]
gi|123031690|sp|Q0I9J4.1|ISPG_SYNS3 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|113880105|gb|ABI45063.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CC9311]
Length = 398
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 208/310 (67%), Gaps = 5/310 (1%)
Query: 69 LLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIA 128
++ Q+Y IH RR TRTVMVG+V IGSEHPI VQ+M DT D+ G+V ++R+A
Sbjct: 1 MMTASQRYDTKIH---RRVTRTVMVGDVPIGSEHPIAVQSMINEDTLDIDGSVAGILRLA 57
Query: 129 DQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRV 187
D G ++VR+T A A +I+++L + IPLVAD+H +AL VA+ DK+R+
Sbjct: 58 DAGCEIVRVTTPSIGHAKAMGKIRSALRAQGCKIPLVADVHHNGTRIALEVAKHVDKVRI 117
Query: 188 NPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI 247
NPG F + ++ E++ +E+ I+E F+PLV+ K+ +A+RIG NHGSL++R+
Sbjct: 118 NPGLFVFDKPDPDRQEFSKEEFDAIGDRIKETFAPLVQVLKEQNKALRIGVNHGSLAERM 177
Query: 248 MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
+ YGD+P+GMVESA EF RIC LDFHN + SMKAS VM+ AYRL+ M G++Y
Sbjct: 178 LFTYGDTPQGMVESAMEFVRICDSLDFHNIVISMKASRAPVMLAAYRLMADTMDREGFNY 237
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC-RRLANLGMR 366
PLHLGVTEAG+G+ GR+KS GI TLL +GLGDT+RVSLTE PEKEI C L LG+R
Sbjct: 238 PLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTLRVSLTEAPEKEIPVCFSILQALGIR 297
Query: 367 AAELQQGVAP 376
++ P
Sbjct: 298 KTMVEYVACP 307
>gi|329964277|ref|ZP_08301378.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fluxus YIT 12057]
gi|328525582|gb|EGF52625.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
fluxus YIT 12057]
Length = 605
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/265 (54%), Positives = 182/265 (68%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I SL +
Sbjct: 1 MGGSNPIRIQSMTNTATQDTEACVAQAKRIVDAGGEYVRLTAQGIKEAENLMNINASLRR 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVADIHF P VA A +K+R+NPGN+ D F+ L+YTD+EY +ELQ I
Sbjct: 61 DGYMVPLVADIHFNPKVADVAALYVEKVRINPGNYVDAARTFKHLDYTDEEYAQELQKIR 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P ++ CK A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC + DF +
Sbjct: 121 DRFIPFLDICKANHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVEQDFKDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN VVMV+ RLL A M +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVVMVKTVRLLAAVMEQENMYFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN 362
LGDTIRVSL+E PE EI R+L +
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLVD 265
>gi|281424689|ref|ZP_06255602.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oris F0302]
gi|281401059|gb|EFB31890.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
oris F0302]
Length = 611
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/278 (52%), Positives = 188/278 (67%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T TV +G + +GSE+P+RVQ+MTT +T D V++ I G +LVR+T QG RE
Sbjct: 10 RRETSTVHIGAIDMGSEYPVRVQSMTTTNTNDTEACVKQAEEIIKAGGELVRLTTQGTRE 69
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L Y PLVAD+HF P+VA A +K+R+NPGN+ D +F + EY
Sbjct: 70 AENLKPINAQLRADGYTTPLVADVHFNPNVADVAALYAEKVRINPGNYVDPARKFIKQEY 129
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY EL+ IE P + CK AVRIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 130 TDEEYAAELKKIEGRLIPFLNICKANHTAVRIGVNHGSLSDRIRNRYGDTPEGIVESCME 189
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RI ++ F N + S+KASN ++MV++ RLLV M G +YPLHLGVTEAGEGEDGR+
Sbjct: 190 FLRIFKREKFDNVVISIKASNTIIMVRSVRLLVETMDKEGMNYPLHLGVTEAGEGEDGRI 249
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KSA+GIG LL DG+GDTIRVSL+E P EI R L +
Sbjct: 250 KSAVGIGALLADGIGDTIRVSLSEEPAAEIPVARHLVD 287
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPN-GIHRDDLVIGAGTNVGALLVDGLGDGLLLE 613
R+ R L + EN + PV+ + + + D + A ++GAL+VDGL DGL L
Sbjct: 430 RLAEQRALVHEMWENGVFNPVVFAQMYRHTAAEKSDFQLEAAADMGALMVDGLTDGLWLM 489
Query: 614 APGQ-DFDFLRDTSFNLLQGVCL 635
G + DT+F +LQ L
Sbjct: 490 NDGDIPQSIITDTAFGILQAARL 512
>gi|352094372|ref|ZP_08955543.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 8016]
gi|351680712|gb|EHA63844.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 8016]
Length = 397
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/309 (50%), Positives = 205/309 (66%), Gaps = 5/309 (1%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
+ Q+Y IH RR TRTVMVG+V IGSEHPI VQ+M DT D+ G+V + R+AD
Sbjct: 1 MTASQRYDTKIH---RRVTRTVMVGDVPIGSEHPIAVQSMINEDTLDIDGSVAGIRRLAD 57
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVN 188
G ++VR+T A A +I+ +L + NIPLVAD+H +AL VA+ DK+R+N
Sbjct: 58 AGCEIVRVTTPSIGHAIAMGKIRAALRAQGCNIPLVADVHHNGTRIALEVAKHVDKVRIN 117
Query: 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248
PG F + E+ E++ +E+ I+E F+PLV K+ +A+RIG NHGSL++R++
Sbjct: 118 PGLFVFDKPDPERQEFSQEEFDAIGDRIKETFAPLVRVLKEQNKALRIGVNHGSLAERML 177
Query: 249 SYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYP 308
YGD+P+GMVESA EF RIC LDFHN + SMKAS VM+ AYRL+ M G++YP
Sbjct: 178 FTYGDTPQGMVESAMEFVRICDSLDFHNIVISMKASRAPVMLAAYRLMADTMDREGFNYP 237
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC-RRLANLGMRA 367
LHLGVTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L LG+R
Sbjct: 238 LHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCFSILQALGIRK 297
Query: 368 AELQQGVAP 376
++ P
Sbjct: 298 TMVEYVACP 306
>gi|78779061|ref|YP_397173.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9312]
gi|78712560|gb|ABB49737.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9312]
Length = 405
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 200/294 (68%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG+VAIGS++P+RVQ+M DT DV + R+ D G ++VR+TV
Sbjct: 22 RRITRTVMVGDVAIGSDYPVRVQSMINEDTMDVENAYLAIKRLHDVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N PLVAD+H +A+ VA+ DK+R+NPG F ++ + E
Sbjct: 82 AKAVGDIKAKLLENNIKTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD+E++ Q I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDEEFETIKQTILKRFTPLVEVLKAENKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMLAAYRMIADRLDSEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
>gi|116070627|ref|ZP_01467896.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. BL107]
gi|116066032|gb|EAU71789.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. BL107]
Length = 408
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/305 (50%), Positives = 203/305 (66%), Gaps = 5/305 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG+V IGSEHPI VQ+M DT D+ G+V ++R+ + G +
Sbjct: 13 RRYDTQIH---RRVTRTVMVGSVPIGSEHPIAVQSMINEDTLDIDGSVAGIIRLVEAGCE 69
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+T A A +IK L K N+PLVAD+H +AL VA+ DK+R+NPG F
Sbjct: 70 IVRVTTPSIGHAKAMGKIKAELSAKGCNVPLVADVHHNGTKIALEVAQHVDKVRINPGLF 129
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E+T+ E+ + I E F PLV+ ++ +A+RIG NHGSL++R++ YG
Sbjct: 130 VFDKPDPNRQEFTESEFAEIGTRIRETFEPLVKLLREQNKALRIGVNHGSLAERMLFTYG 189
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P+GMVESA EF RIC LDFHN + SMKAS VM+ AYRL+ M G++YPLHLG
Sbjct: 190 DTPKGMVESAMEFVRICDDLDFHNIVISMKASRAPVMLSAYRLMADTMDQEGFNYPLHLG 249
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
VTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L +LG+R ++
Sbjct: 250 VTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVE 309
Query: 372 QGVAP 376
P
Sbjct: 310 YIACP 314
>gi|78188327|ref|YP_378665.1| IspG protein [Chlorobium chlorochromatii CaD3]
gi|78170526|gb|ABB27622.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlorobium
chlorochromatii CaD3]
Length = 688
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/271 (52%), Positives = 197/271 (72%), Gaps = 2/271 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V G +A+G PIRV++MT T D A TVE+ R+ + G +++R+TV +++
Sbjct: 6 RRFTREVPFGKIALGGYQPIRVESMTNTHTMDTAATVEQCRRLYEAGCEIIRLTVPTEKD 65
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I++ L + PLVADIHF+ A++ E + IR+NPGN+A + +F +Y
Sbjct: 66 AENLRAIRDQLRRDGITTPLVADIHFSVRAAMKAVEFVENIRINPGNYA-AKPKFSAEDY 124
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
T+ EYQ EL+H+ + F PLVEK + G ++RIGTNHGSLSDR++S YG+SP GMVE+A E
Sbjct: 125 TEAEYQAELEHVRQEFLPLVEKARSLGASMRIGTNHGSLSDRVVSRYGNSPEGMVEAALE 184
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVTEAGEGEDGR 323
FAR+C ++ +++ LFSMK+SN VM+QAYRLLVA+ + YPLHLGVTEAG+G++GR
Sbjct: 185 FARMCEEVGYYDLLFSMKSSNVRVMIQAYRLLVAKADAELRYAYPLHLGVTEAGDGDEGR 244
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 245 IKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 275
>gi|123965984|ref|YP_001011065.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9515]
gi|123200350|gb|ABM71958.1| GcpE protein [Prochlorococcus marinus str. MIT 9515]
Length = 405
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 148/294 (50%), Positives = 199/294 (67%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG++AIGS++P+RVQ+M DT DV + R+ D G ++VR+TV
Sbjct: 22 RRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVDNAYLAIKRLHDVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N N PLVAD+H +A+ VA+ DK+R+NPG F ++ + +
Sbjct: 82 AKAVGDIKEKLIKSNINTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTK 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD E++ I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDAEFETIKNTILKRFTPLVEVLKSKNKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMLAAYRMISDRLDAEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
>gi|317476430|ref|ZP_07935679.1| GcpE protein [Bacteroides eggerthii 1_2_48FAA]
gi|316907456|gb|EFV29161.1| GcpE protein [Bacteroides eggerthii 1_2_48FAA]
Length = 606
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 193/302 (63%), Gaps = 7/302 (2%)
Query: 93 VGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIK 152
+G +G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I
Sbjct: 3 IGATPMGGSNPIRIQSMTNTSTQDTDACVAQAKRIVDAGGEYVRLTTQGVKEAENLMNIN 62
Query: 153 NSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKE 212
+L Q Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +E
Sbjct: 63 AALRQDGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKHLEYTDEEYAQE 122
Query: 213 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL 272
++ I + F P + CK A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC
Sbjct: 123 VRKIRDRFIPFLNICKANHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVAE 182
Query: 273 DFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGT 332
F + + S+KASN V+MV+ RLL M G +PLHLGVTEAG+GEDGR+KSA+GIG
Sbjct: 183 KFMDVVISIKASNTVIMVKTVRLLAHIMEKEGMHFPLHLGVTEAGDGEDGRIKSALGIGA 242
Query: 333 LLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE---LQQGVAPFEEKHRHYFDFQR 389
LL DGLGDT+RVSL+E PE EI R+L + + + VAP HY +R
Sbjct: 243 LLADGLGDTVRVSLSEAPEAEIPVARKLVDYMTQRRNHPYIPGAVAP----EFHYLSPER 298
Query: 390 RS 391
R+
Sbjct: 299 RT 300
>gi|78212828|ref|YP_381607.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CC9605]
gi|123578218|sp|Q3AK30.1|ISPG_SYNSC RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|78197287|gb|ABB35052.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. CC9605]
Length = 398
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 202/305 (66%), Gaps = 5/305 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG+V +GSEHPI VQ+M DT D+ V ++R+A+ G++
Sbjct: 6 RRYDTQIH---RRVTRTVMVGDVPVGSEHPIVVQSMINEDTLDIEAAVAGIIRLAEAGSE 62
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+T A A +I+ L Q+ ++PLVAD+H +AL VA+ DK+R+NPG F
Sbjct: 63 IVRVTTPSMAHAKAMGQIRKELRQRGCSVPLVADVHHNGVKIALEVAQHVDKVRINPGLF 122
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E++ +E+ Q I E F PLV + +A+RIG NHGSL++R++ YG
Sbjct: 123 IFDKPDPNRQEFSPEEFAAIGQRIRETFEPLVTLLRDQNKALRIGVNHGSLAERMLFTYG 182
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P GMVESA EF RIC +LDFHN L SMKAS VM+ AYRL+ M G++YPLHLG
Sbjct: 183 DTPEGMVESAMEFVRICHELDFHNILISMKASRAPVMLAAYRLMADTMDKEGFNYPLHLG 242
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
VTEAG+G+ GR+KS GI TLL DGLGDT+RVSLTE PEKEI C L +LG+R ++
Sbjct: 243 VTEAGDGDYGRIKSTAGIATLLADGLGDTLRVSLTEAPEKEIPVCYSILQSLGLRKTMVE 302
Query: 372 QGVAP 376
P
Sbjct: 303 YVACP 307
>gi|33861233|ref|NP_892794.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|50400955|sp|Q7V215.1|ISPG_PROMP RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|33639965|emb|CAE19135.1| GcpE protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 405
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 147/294 (50%), Positives = 201/294 (68%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG++AIGS++P+RVQ+M DT DV + + R+ + G ++VR+TV
Sbjct: 22 RRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVDNSYLAIKRLHEVGCEIVRLTVPSLAH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L++ N + PLVAD+H +A+ VA+ DK+R+NPG F ++ + E
Sbjct: 82 AKAVGDIKEKLIKNNIDTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD E++ + I + F+PLVE K +A+RIG NHGSLS+R++ YGD+P GM ESA
Sbjct: 142 YTDTEFETIKKTILKRFTPLVEVLKSENKALRIGVNHGSLSERMLFTYGDTPLGMTESAM 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC +LDFHN + SMKAS VM+ AYR++ + G++YPLHLGVTEAG+G+ GR
Sbjct: 202 EFVKICDELDFHNIIISMKASRAPVMLAAYRMIADRLDAEGYNYPLHLGVTEAGDGDYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +GLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCP 315
>gi|260435770|ref|ZP_05789740.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 8109]
gi|260413644|gb|EEX06940.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 8109]
Length = 409
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/311 (48%), Positives = 203/311 (65%), Gaps = 5/311 (1%)
Query: 68 PLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRI 127
P+ ++Y IH RR TRTVMVG+V +GSEHPI VQ+M DT D+ V ++R+
Sbjct: 11 PMTALDRRYDTQIH---RRVTRTVMVGDVPVGSEHPIVVQSMINEDTLDIEAAVAGIIRL 67
Query: 128 ADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIR 186
A+ G+++VR+T A A +I+ L Q+ IPLVAD+H +AL VA+ DK+R
Sbjct: 68 AEAGSEIVRVTTPSMAHAKAMGQIRQELRQRGCTIPLVADVHHNGVKIALEVAQHVDKVR 127
Query: 187 VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDR 246
+NPG F + + E++ +E+ + I E F PLV + +A+RIG NHGSL++R
Sbjct: 128 INPGLFIFDKPDPNRQEFSPEEFASIGKRIRETFEPLVTLLRDQNKALRIGVNHGSLAER 187
Query: 247 IMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD 306
++ YGD+P GMVESA EF RIC +LDFHN + SMKAS VM+ AYRL+ M G++
Sbjct: 188 MLFTYGDTPEGMVESAMEFVRICHELDFHNIVISMKASRAPVMLAAYRLMADTMDKEGFN 247
Query: 307 YPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGM 365
YPLHLGVTEAG+G+ GR+KS GI TLL DGLGDT+RVSLTE PEKEI C L +LG+
Sbjct: 248 YPLHLGVTEAGDGDYGRIKSTAGIATLLADGLGDTLRVSLTEAPEKEIPVCYSILQSLGL 307
Query: 366 RAAELQQGVAP 376
R ++ P
Sbjct: 308 RKTMVEYVACP 318
>gi|329956628|ref|ZP_08297201.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
clarus YIT 12056]
gi|328524000|gb|EGF51076.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
clarus YIT 12056]
Length = 599
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/265 (53%), Positives = 182/265 (68%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I +L +
Sbjct: 1 MGGSNPIRIQSMTNTSTQDTDACVAQAKRIVDAGGEYVRLTTQGIKEAENLMNINAALRR 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +E++ I
Sbjct: 61 DGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKHLEYTDEEYAQEVRKIR 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC +F +
Sbjct: 121 DRFVPFLNICKANHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVAEEFTDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN V+MV+ RLL M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVIMVKTVRLLADIMEKEGMHFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN 362
LGDTIRVSL+E PE EI R+LA+
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLAD 265
>gi|167763736|ref|ZP_02435863.1| hypothetical protein BACSTE_02114 [Bacteroides stercoris ATCC
43183]
gi|167697852|gb|EDS14431.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
stercoris ATCC 43183]
Length = 599
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/265 (53%), Positives = 179/265 (67%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I +L Q
Sbjct: 1 MGGSNPIRIQSMTNTSTQDTDACVAQAKRIVDAGGEYVRLTTQGVKEAENLMNINAALRQ 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y PLVAD+HF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +EL+ I
Sbjct: 61 DGYMTPLVADVHFNPKVADVAAQYAEKVRINPGNYVDSARTFKHLEYTDEEYAQELRKIR 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC F +
Sbjct: 121 DRFVPFLNICKANHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVAEQFMDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN V+MV+ RLL M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVIMVKTVRLLAHIMEKEGIHFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLAN 362
LGDTIRVSL+E PE EI R+L +
Sbjct: 241 LGDTIRVSLSEAPEAEIPVARKLTD 265
>gi|218131419|ref|ZP_03460223.1| hypothetical protein BACEGG_03035 [Bacteroides eggerthii DSM 20697]
gi|217986351|gb|EEC52688.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
eggerthii DSM 20697]
Length = 599
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 147/297 (49%), Positives = 191/297 (64%), Gaps = 7/297 (2%)
Query: 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ 157
+G +PIR+Q+MT T+D V + RI D G + VR+T QG +EA+ I +L Q
Sbjct: 1 MGGSNPIRIQSMTNTSTQDTDACVAQAKRIVDAGGEYVRLTTQGVKEAENLMNINAALRQ 60
Query: 158 KNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIE 217
Y +PLVAD+HF P VA A+ +K+R+NPGN+ D F+ LEYTD+EY +E++ I
Sbjct: 61 DGYMVPLVADVHFNPKVADVAAQYAEKVRINPGNYVDAARTFKHLEYTDEEYAQEVRKIR 120
Query: 218 EVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277
+ F P + CK A+RIG NHGSLSDRIMS YGD+P GMVES EF RIC F +
Sbjct: 121 DRFIPFLNICKANHTAIRIGVNHGSLSDRIMSRYGDTPEGMVESCMEFLRICVAEKFMDV 180
Query: 278 LFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337
+ S+KASN V+MV+ RLL M G +PLHLGVTEAG+GEDGR+KSA+GIG LL DG
Sbjct: 181 VISIKASNTVIMVKTVRLLAHIMEKEGMHFPLHLGVTEAGDGEDGRIKSALGIGALLADG 240
Query: 338 LGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE---LQQGVAPFEEKHRHYFDFQRRS 391
LGDT+RVSL+E PE EI R+L + + + VAP HY +RR+
Sbjct: 241 LGDTVRVSLSEAPEAEIPVARKLVDYMTQRRNHPYIPGAVAP----EFHYLSPERRT 293
>gi|110598841|ref|ZP_01387097.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlorobium
ferrooxidans DSM 13031]
gi|110339549|gb|EAT58068.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlorobium
ferrooxidans DSM 13031]
Length = 679
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/278 (51%), Positives = 199/278 (71%), Gaps = 6/278 (2%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
+++ RR TR V G + +G P+RV++MT T D TV + R+ + G +++R+TV
Sbjct: 1 MYQYRRRLTREVPFGALVLGGYQPVRVESMTNTHTMDTVATVAQCRRLYEAGCEIIRLTV 60
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
+++A+ I++ L + PLVADIHF+P AL+ E + IRVNPGN+A R +F
Sbjct: 61 PTEKDAENLRNIRDQLRRDGIATPLVADIHFSPKAALKAVEFVENIRVNPGNYAAR-PKF 119
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
EY+++EY +E++H+ F+PLVEK +++G ++RIGTNHGSLSDRI+S +G+SP GMV
Sbjct: 120 SSDEYSEEEYLREIEHVRTEFTPLVEKARQFGVSMRIGTNHGSLSDRIVSRFGNSPEGMV 179
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM---YVHGWDYPLHLGVTEA 316
E+A EFAR C +L +++ LFSMKASN VM+QAYRLLV + H YPLHLGVTEA
Sbjct: 180 EAALEFARFCEELGYYDILFSMKASNVRVMIQAYRLLVEKADGELKHA--YPLHLGVTEA 237
Query: 317 GEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G+G++GR+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 238 GDGDEGRVKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 275
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ 617
A+RRL + + +L++P+I + + R D +I G L DG+GD L L+ G
Sbjct: 501 ASRRLVQAFNSRSLDYPIIVRYR-ESASERLDSLISTSVQTGTLFCDGIGDMLALQT-GL 558
Query: 618 DFDFLRDTSFNLLQG 632
D + +FN+LQG
Sbjct: 559 SVDDEVNLAFNILQG 573
>gi|119356072|ref|YP_910716.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlorobium
phaeobacteroides DSM 266]
gi|119353421|gb|ABL64292.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlorobium
phaeobacteroides DSM 266]
Length = 677
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 141/271 (52%), Positives = 194/271 (71%), Gaps = 2/271 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V G +A+G PIRV++MT T D TV++ R+ + G +++R+TV +R+
Sbjct: 6 RRFTREVPFGKIALGGYMPIRVESMTNTHTLDTVATVKQCRRLYEAGCEIIRLTVPTERD 65
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I++ L + PLVADIHF+ A + E + IR+NPGN+A ++ +F Y
Sbjct: 66 AENLRSIRDQLRSDGIDTPLVADIHFSSRAAFKAVEFVENIRINPGNYATKQ-KFSAETY 124
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TDDEYQ+E++ + + F PLV K +++G ++RIGTNHGSLSDRI+S YG+SP GMVE+A E
Sbjct: 125 TDDEYQEEIERVRKEFLPLVYKAREFGASMRIGTNHGSLSDRIVSRYGNSPEGMVEAALE 184
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVTEAGEGEDGR 323
FARIC + +H+ LFSMK+SN VM+QAYRLL + + YPLHLGVTEAG+G++GR
Sbjct: 185 FARICEEEGYHDVLFSMKSSNVKVMIQAYRLLAVKADAELRYAYPLHLGVTEAGDGDEGR 244
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 245 VKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 275
>gi|229495691|ref|ZP_04389419.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
endodontalis ATCC 35406]
gi|229317265|gb|EEN83170.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
endodontalis ATCC 35406]
Length = 604
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 140/288 (48%), Positives = 194/288 (67%), Gaps = 1/288 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR T +V +G V +GSE+P+R+QTM T D + + R+A GAD +R T QG RE
Sbjct: 20 RRCTCSVSIGTVPLGSEYPLRIQTMANVSTPDTEAGIAQTERVALAGADYMRFTAQGVRE 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I+ +L +K Y+IPL+ADIHF P A + +K+R+NPGNFADR+ ++
Sbjct: 80 AECLQTIRATLDKKGYSIPLIADIHFNPQAAYEALKHVEKVRINPGNFADRKGEWSGESL 139
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+D ++ + ++++F + + K+ RA+R+G NHGSLS+R++ YGD+P GMVES E
Sbjct: 140 SDADFAHGRERVQQLFGDFLREAKRLKRAIRLGVNHGSLSERMLRRYGDTPEGMVESCLE 199
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
+ R+ R LDF + + SMK+SN VM QA RLLV M G YPLH+GVTEAGEGEDGR+
Sbjct: 200 YLRVARSLDFEDIVISMKSSNVQVMTQAVRLLVERMDEMGVHYPLHIGVTEAGEGEDGRI 259
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA-NLGMRAAELQ 371
KSA+GIG+LL DGLGDT+RVSL+E PE E+ R L ++ RAA Q
Sbjct: 260 KSAVGIGSLLTDGLGDTLRVSLSEAPEAELPVARLLMEHIAERAAAPQ 307
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%)
Query: 555 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEA 614
RV RR L+E + P+ QF + + I A T++G LL++G G ++L A
Sbjct: 410 RVGLWRRTIALLAEMGITAPIALEAQFAPHESLEKVQIAAATDLGTLLLEGAGSAIMLTA 469
Query: 615 PGQDFDFLRDTSFNLLQGVCL 635
P L+ + +LQ L
Sbjct: 470 PHLPLSSLQALALGILQATRL 490
>gi|258647554|ref|ZP_05735023.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
tannerae ATCC 51259]
gi|260852341|gb|EEX72210.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
tannerae ATCC 51259]
Length = 633
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 213/563 (37%), Positives = 288/563 (51%), Gaps = 68/563 (12%)
Query: 86 RKTRTVMVGNVAIGS-EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R + V VGN +G +PIR+Q+MTT T D A +V + RI GAD VR+T QG RE
Sbjct: 16 RTSHEVKVGNRPMGGPSNPIRLQSMTTTKTTDTAESVAQTERIVAAGADYVRLTTQGLRE 75
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ IK L ++PLVAD+HF P+VA A + +R+NPGN+ D F LEY
Sbjct: 76 AENLRNIKAGLQADGVDVPLVADVHFNPAVADAAAAIVEGVRINPGNYVDPARTFRHLEY 135
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY EL +E F L+ C+++ A+RIG NHGSLSDRIMS YGD+P G+VES E
Sbjct: 136 TDEEYAAELDRLEARFKQLLAICRQHHTALRIGVNHGSLSDRIMSRYGDTPAGIVESCME 195
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC + +F + + S+KASN VVMV++ RLL A M G D+PLHLGVTEAGEGEDGR+
Sbjct: 196 FLRICVRENFRDVVISIKASNTVVMVRSVRLLCAVMDREGMDFPLHLGVTEAGEGEDGRI 255
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA GIG LL DG+GDTIRVSL+E PE EI +LA A +++ PF R +
Sbjct: 256 KSAAGIGVLLADGIGDTIRVSLSEAPEAEIPVAYKLA-----AHVVERAGHPFIPG-RAF 309
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLD-----QLKAPELLYKSLAAKLV 439
F S P ++ V G H V++S LD P+ +Y
Sbjct: 310 PGFDYVS---PDRRPTIAVGNIGGTHP--PVVISTRLDGDAHFSATLPDYVYAG------ 358
Query: 440 VGMPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQL--TKPLPHAMV 497
R+LP+V+ A +K ++D + P + + T+ LP +
Sbjct: 359 ----------------RQLPAVEQRKA--GVKYIIDADLWAGEPDTYPVFTTETLPFVGM 400
Query: 498 LVNLQELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQ 557
+ Y L G + LR + E+ I+ + R+
Sbjct: 401 CKAKMKFLFLTYPAL--GEEVKACLR---HHPEMVIIA-------------QSNHANRLG 442
Query: 558 AARRLFEYLSENNLNFPVIHHIQFPNG-IHRDDLVIGAGTNVGALLVDGLGDGLLLEAPG 616
R L L NL+ PV+ +Q G R+D I + GAL DGL DGL+L
Sbjct: 443 EQRALIHELWSENLSTPVVVFLQSAFGDDQREDFQICHAADAGALFFDGLADGLMLFNTT 502
Query: 617 QD------FDFLRDTSFNLLQGV 633
+ D DT+F +LQ
Sbjct: 503 PEGHRPLAHDLQDDTAFGILQAT 525
>gi|189345737|ref|YP_001942266.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlorobium
limicola DSM 245]
gi|189339884|gb|ACD89287.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlorobium
limicola DSM 245]
Length = 679
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 145/274 (52%), Positives = 198/274 (72%), Gaps = 8/274 (2%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V G +A+G PIRV++MT T D A +VE+ R+ D G +++R+TV +R+
Sbjct: 6 RRFTREVPFGPIALGGYLPIRVESMTNTHTFDTAASVEQCRRLHDAGCEIIRLTVPTERD 65
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
AD +I++ L + + PLVADIHF+ A++ E + IR+NPGN+A R+ +F EY
Sbjct: 66 ADNLKQIRDQLRRDGIDTPLVADIHFSARAAMKAVEYVENIRINPGNYATRQ-KFSNNEY 124
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
T+ Y++EL + + F PLV + K+ G ++RIGTNHGSLSDRI+S YG+SP GMVE+A E
Sbjct: 125 TEAAYREELDVVRKEFLPLVSRAKELGVSMRIGTNHGSLSDRIVSRYGNSPEGMVEAALE 184
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLV----AEMYVHGWDYPLHLGVTEAGEGE 320
FARIC + +++ LFSMK+SN VM+QAYRLLV AE+ + YPLHLGVTEAG+G+
Sbjct: 185 FARICEEYGYYDLLFSMKSSNVRVMIQAYRLLVKRADAELR---YSYPLHLGVTEAGDGD 241
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+GR+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 242 EGRVKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 275
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT-EAGEGEDGR 323
A R+ F +FS+ +S V + YR LV E G+DYP+ + G+
Sbjct: 477 LAEKLRERGFERIMFSISSSATVFV---YRHLVREFNERGFDYPIVVRFNAHNGDTLKTL 533
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEE---K 380
+ +++ GTL DG+GD + + P EID LA ++ A ++ F
Sbjct: 534 IDASVQAGTLFCDGIGDILALETVLPASAEID----LAFNILQGARIRMSKTEFISCPGC 589
Query: 381 HRHYFDFQR 389
R YFD ++
Sbjct: 590 GRTYFDLEK 598
>gi|375254857|ref|YP_005014024.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Tannerella
forsythia ATCC 43037]
gi|363407196|gb|AEW20882.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Tannerella
forsythia ATCC 43037]
Length = 609
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 141/278 (50%), Positives = 183/278 (65%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR T V +GN +G +P+R+Q+M T D V + +R+A+ GA+ +R T QG+RE
Sbjct: 3 RRHTSVVTIGNTPLGGTNPVRIQSMADVSTMDTDAAVAQALRMAEAGAEYIRFTAQGERE 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I++ L +K PLVADIHF P A A +K+R+NPGN+ D +F +Y
Sbjct: 63 AHNLGLIRSKLREKGCETPLVADIHFNPKAAEVAAVHVEKVRINPGNYVDGVRKFRSTDY 122
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY LQ I + F P + C+K+ A+RIG NHGSLSDRIM+ YGD+P GMV S E
Sbjct: 123 TDEEYAAGLQKIRDRFIPFLRLCRKHRTAIRIGVNHGSLSDRIMNRYGDTPEGMVASCME 182
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC++ F++ + S+KASN VVMV+ RLLV M YPLHLGVTEAG EDGR+
Sbjct: 183 FLRICKEEHFNDVVLSVKASNTVVMVRTVRLLVRMMEAEDMYYPLHLGVTEAGNDEDGRI 242
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
KS GIG LL DG+GDTIRVSL+EPPE EI R+L +
Sbjct: 243 KSVTGIGALLTDGIGDTIRVSLSEPPEAEIPVARKLVH 280
>gi|88808860|ref|ZP_01124369.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 7805]
gi|88786802|gb|EAR17960.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 7805]
Length = 411
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/319 (47%), Positives = 207/319 (64%), Gaps = 5/319 (1%)
Query: 60 LQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAG 119
L AS+ Q+Y IH RR+TRTVMVG+V IGSEHP+ VQ+M DT D+ G
Sbjct: 5 LATASQTGNDTARSQRYDTVIH---RRRTRTVMVGDVPIGSEHPVAVQSMINEDTLDIEG 61
Query: 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRV 178
V + R+AD G ++VR+T A A +I+ +L + +PLVAD+H +AL V
Sbjct: 62 AVAGIRRLADAGCEIVRVTTPSMAHAKAMGDIRAALRSQGCGVPLVADVHHNGIRIALEV 121
Query: 179 AECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238
A+ DK+R+NPG F + ++ +++ +E+Q Q I++ F+PLVE K +A+RIG
Sbjct: 122 AKHVDKVRINPGLFVFDKPDPDRQDFSREEFQAIGQRIKDDFAPLVEVLKTQNKALRIGV 181
Query: 239 NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 298
NHGSL++R++ YGD+P GMVESA EF +C +LDFHN + SMKAS VM+ AYRL+
Sbjct: 182 NHGSLAERMLFTYGDTPEGMVESAMEFVHLCDELDFHNIVISMKASRAPVMLAAYRLMAD 241
Query: 299 EMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC- 357
+ G+ YPLHLGVTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C
Sbjct: 242 TLDREGFHYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCF 301
Query: 358 RRLANLGMRAAELQQGVAP 376
L LG+R ++ P
Sbjct: 302 SILQALGLRKTMVEYVACP 320
>gi|336397773|ref|ZP_08578573.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
multisaccharivorax DSM 17128]
gi|336067509|gb|EGN56143.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Prevotella
multisaccharivorax DSM 17128]
Length = 619
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/285 (52%), Positives = 197/285 (69%), Gaps = 1/285 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+T V VG + +G ++P+R+Q+MTT T D G++ + RI G +LVR+T QG RE
Sbjct: 8 RRETSVVHVGQIDMGGDNPVRIQSMTTTSTDDTEGSITQAERIIKAGGELVRLTTQGIRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A+ I L + PLVAD+HF P VA A +K+R+NPGN+ D +F + EY
Sbjct: 68 AENLKNISAGLRHDGFATPLVADVHFNPRVADVAALYAEKVRINPGNYVDPARKFIKHEY 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
TD+EY +EL+ IEE P ++ CK++ A+RIG NHGSLSDRI + YGD+P G+VES E
Sbjct: 128 TDEEYAEELKKIEERLVPFLDICKEHHTAIRIGVNHGSLSDRIRNRYGDTPEGIVESCME 187
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC+K DF+N + S+K+SN VVMV++ RLLV M +PLHLGVTEAGEGEDGR+
Sbjct: 188 FLRICKKHDFNNVVISIKSSNTVVMVRSVRLLVETMEREDMHHPLHLGVTEAGEGEDGRI 247
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAA 368
KSA+GIG LL DG+GDTIRVSLTE PE EI R L + +G +A
Sbjct: 248 KSAVGIGALLADGIGDTIRVSLTEEPEAEIPVARHLVDYIGHKAG 292
>gi|33865708|ref|NP_897267.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 8102]
gi|50400949|sp|Q7U712.1|ISPG_SYNPX RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|33632878|emb|CAE07689.1| GcpE protein [Synechococcus sp. WH 8102]
Length = 398
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/305 (48%), Positives = 202/305 (66%), Gaps = 5/305 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG+VAIGS+HP+ VQ+M DT D+ V ++R+A+ G++
Sbjct: 6 RRYDTQIH---RRITRTVMVGDVAIGSDHPVVVQSMINEDTLDIDAAVAGIVRLAEAGSE 62
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+T A A EI+ ++ + +PLVAD+H +A+ VA+ DK+R+NPG F
Sbjct: 63 IVRVTTPSMAHARAMGEIRAAVRARGCTVPLVADVHHNGVKIAMEVAQHVDKVRINPGLF 122
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E++D E+ I E F PLV + +A+RIG NHGSL++R++ YG
Sbjct: 123 VFDKPDPNRQEFSDKEFAAIGARIHETFEPLVTLLRDQNKALRIGVNHGSLAERMLFTYG 182
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P+GMVESA EF RIC +LDFHN + SMKAS VM+ AYRL+ M G++YPLHLG
Sbjct: 183 DTPKGMVESAMEFVRICDELDFHNIVISMKASRAPVMLAAYRLMADTMDKEGFNYPLHLG 242
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
VTEAG+G+ GR+KS GI TLL DGLGDTIRVSLTE PE+EI C L +LG+R ++
Sbjct: 243 VTEAGDGDYGRVKSTAGIATLLADGLGDTIRVSLTEAPEREIPVCYSILQSLGLRKTMVE 302
Query: 372 QGVAP 376
P
Sbjct: 303 YVACP 307
>gi|194337669|ref|YP_002019463.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pelodictyon phaeoclathratiforme BU-1]
gi|194310146|gb|ACF44846.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pelodictyon phaeoclathratiforme BU-1]
Length = 688
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/276 (51%), Positives = 199/276 (72%), Gaps = 2/276 (0%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
+++ RR TR V+ GN A+G PIRV++MT T D A TVE+ R+ D G +++R+TV
Sbjct: 1 MYQYRRRLTREVVFGNRALGGYQPIRVESMTNTHTLDTAATVEQCRRLYDAGCEIIRLTV 60
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
+R+A+ I++ L + + PLVADIHF+ AL+ E + IR+NPGN+A + +F
Sbjct: 61 PTERDAENLRNIRDQLRRDGIDTPLVADIHFSVRAALKAVEFVENIRINPGNYATSQ-KF 119
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
+Y+++EY KEL H+ F+PLVEK ++ G ++RIGTNHGSLSDR++S YG+S GMV
Sbjct: 120 LNSDYSEEEYLKELDHVRLEFAPLVEKARQLGVSMRIGTNHGSLSDRVVSRYGNSAEGMV 179
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVTEAGE 318
E+A EFARI ++ + + LFSMK+SN VM+QAYRLLV + + YPLHLGVTEAG+
Sbjct: 180 EAALEFARISEEMGYFDILFSMKSSNVRVMIQAYRLLVEKADAELRYAYPLHLGVTEAGD 239
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G++GR+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 240 GDEGRVKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 275
>gi|21672988|ref|NP_661053.1| GcpE protein [Chlorobium tepidum TLS]
gi|50401066|sp|Q8KG23.1|ISPG_CHLTE RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|21646050|gb|AAM71395.1| gcpE protein [Chlorobium tepidum TLS]
Length = 746
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/280 (51%), Positives = 195/280 (69%), Gaps = 2/280 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y ++ RR TR V G + +G PIRV++M T T D A +VE+ R+ + G +++
Sbjct: 66 YPAPVYSYRRRVTREVPFGTIFLGGYLPIRVESMITAHTMDTAASVEQCRRLYEAGCEII 125
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
R+TV +++A+ I+ L + + PLVADIHF+ A++ E + IR+NPGN+A
Sbjct: 126 RLTVPTEKDAENLKNIREQLRRDGIDTPLVADIHFSAKAAMKAVEFVENIRINPGNYATG 185
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
A+F +YTDDEY+ EL + E F+PLV K + G ++RIGTNHGSLSDRI+S YG+SP
Sbjct: 186 -AKFSSKDYTDDEYRAELDKVREEFTPLVRKARSLGVSMRIGTNHGSLSDRIVSRYGNSP 244
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVT 314
GMVE+A EF+RIC +++ LFSMK+SN VM+QAYRLLVA + YPLHLGVT
Sbjct: 245 EGMVEAALEFSRICEDEGYYDQLFSMKSSNVRVMIQAYRLLVARADAELRYAYPLHLGVT 304
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG+G++GR+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 305 EAGDGDEGRIKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 344
>gi|148242561|ref|YP_001227718.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. RCC307]
gi|147850871|emb|CAK28365.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. RCC307]
Length = 410
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/294 (50%), Positives = 193/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR+V VG++ IGSEHP+ VQ+M DT DV G ++R+ G ++VR+TV
Sbjct: 27 RRKTRSVRVGDIWIGSEHPVVVQSMINEDTLDVEGATAGILRLHQAGCEIVRLTVPSLAH 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EI+ L ++PLVAD+H +AL VA+ DK+R+NPG F + + E
Sbjct: 87 AKAVGEIRQRLEAAGASVPLVADVHHNGMKIALEVAKHVDKVRINPGLFVFDKPDPNRTE 146
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
+T DE + I E F PLV K+ +A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 147 FTPDEVAAIGERITETFEPLVRSLKEQDKALRIGVNHGSLAERMLFSYGDTPLGMVESAL 206
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC +LDFHN + SMKAS VM+ AYRL+ M G++YPLHLGVTEAG+G+ GR
Sbjct: 207 EFIRICDRLDFHNIVISMKASRAPVMLAAYRLMAHRMDAEGFNYPLHLGVTEAGDGDYGR 266
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DGLGDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 267 IKSTAGIATLLADGLGDTIRVSLTEAPEKEIPVCYGILQSLGLRKTMVEYVACP 320
>gi|414076249|ref|YP_006995567.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anabaena sp.
90]
gi|413969665|gb|AFW93754.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anabaena sp.
90]
Length = 408
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/294 (50%), Positives = 193/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V +G +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRAVQVGDVTVGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSIGH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L+Q ++P+VAD+H +AL VA+ +K+R+NPG + +A + E
Sbjct: 85 AKALAEIKQKLIQTYRDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYIFEKANTSRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTKTEFDEIGEKIRETLAPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDFHN + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFHNVVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|427725899|ref|YP_007073176.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptolyngbya
sp. PCC 7376]
gi|427357619|gb|AFY40342.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Leptolyngbya
sp. PCC 7376]
Length = 407
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 194/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V +G+V IGS+ P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 21 RRKTRPVKIGSVTIGSDFPVVVQSMINEDTLDIEGSVAGIRRLHEIGCEIVRVTVPSMAH 80
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A + +IK L +PLVAD+H +AL VA+ DK+R+NPG + + E++E
Sbjct: 81 AKSLAKIKEKLAATYQTVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFENSSDERIE 140
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
Y+DDE++ + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 141 YSDDEFKAIGEKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 200
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF IC+ LDFHN + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 201 EFIHICQDLDFHNLIISMKASRVPVMLAAYRLMARRMDELGMDYPLHLGVTEAGDGEYGR 260
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 261 IKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 314
>gi|170077366|ref|YP_001734004.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. PCC 7002]
gi|238054449|sp|B1XHZ7.1|ISPG_SYNP2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|169885035|gb|ACA98748.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. PCC 7002]
Length = 406
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/300 (49%), Positives = 197/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGNV IGS++P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 18 TIH---RRKTRAVKVGNVTIGSDYPVVVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVT 74
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A + +IK L + +P+VAD+H +AL VA+ DK+R+NPG + +A
Sbjct: 75 VPSMAHARSLAQIKAKLAETYQAVPIVADVHHNGMKIALEVAKHVDKVRINPGLYVFEQA 134
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
++ YT+ E+ + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 135 SGDRTGYTEAEFAAIGEKIRETLEPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 194
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC+ LDFHN + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG
Sbjct: 195 MVESALEFIRICQSLDFHNLIISMKASRVPVMLAAYRLMAKRMDELGMDYPLHLGVTEAG 254
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 255 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 314
>gi|254416093|ref|ZP_05029848.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Coleofasciculus chthonoplastes PCC 7420]
gi|196177026|gb|EDX72035.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Coleofasciculus chthonoplastes PCC 7420]
Length = 426
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 195/294 (66%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VGN+ IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 43 RRQTRPVSVGNITIGGGHPVVVQSMINEDTLDLEGSVAGIRRLHEIGCEIVRVTVPSMAH 102
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L+Q +PLVAD+H +AL VA+ DK+R+NPG + + + ++ E
Sbjct: 103 AKALAQIKQKLIQTYQEVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKSDRTE 162
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+++ I+E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 163 YTQAEFEQIGAKIKETLAPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 222
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 223 EFIRICESLDFRNLVISLKASRVPVMLAAYRLMVRRMDELGMDYPLHLGVTEAGDGEYGR 282
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 283 IKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 336
>gi|86607013|ref|YP_475776.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. JA-3-3Ab]
gi|123505309|sp|Q2JS69.1|ISPG_SYNJA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|86555555|gb|ABD00513.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. JA-3-3Ab]
Length = 412
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 144/283 (50%), Positives = 189/283 (66%), Gaps = 3/283 (1%)
Query: 73 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGA 132
+Q Y E ++ RR TRTV VGNV IGS+HP+ VQ+M DT D+ V + R+ + G+
Sbjct: 12 QQPYPEPVYP--RRPTRTVAVGNVLIGSQHPVVVQSMINEDTLDIDAAVAAIRRLHEAGS 69
Query: 133 DLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGN 191
++VR+TV A A I++ L+Q +PLVAD+H +AL VA+ DK+R+NPG
Sbjct: 70 EIVRVTVPSMAHAKAMEAIRSKLIQTYKPVPLVADVHHNGIKIALEVAQYVDKVRINPGL 129
Query: 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY 251
F + Q + EYT E + I E F+PLV+ K +A+RIG NHGSL++R++ Y
Sbjct: 130 FVLEKPQPGRTEYTQAELEAIRNKIRETFTPLVQTLKAQNKALRIGVNHGSLAERMLFMY 189
Query: 252 GDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311
GD+P GMVESA E+A IC + DFHN + S KAS P VM+ AYRL G +YP HL
Sbjct: 190 GDTPEGMVESALEYAEICAEQDFHNVVLSFKASRPQVMLAAYRLAARRFDALGLNYPFHL 249
Query: 312 GVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
GVTEAG+GE GR+KSA+GIGTLL +G+GDTIRVSLTE PEKEI
Sbjct: 250 GVTEAGDGEYGRIKSAVGIGTLLAEGIGDTIRVSLTEAPEKEI 292
>gi|193213530|ref|YP_001999483.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chlorobaculum parvum NCIB 8327]
gi|193087007|gb|ACF12283.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chlorobaculum parvum NCIB 8327]
Length = 694
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 143/280 (51%), Positives = 195/280 (69%), Gaps = 2/280 (0%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y ++ RR TR V G + +G PIRV++MT T D A TVE+ R+ + G +++
Sbjct: 14 YPVPVYSYRRRFTREVPFGRITLGGHQPIRVESMTNTHTMDTAATVEQCRRLYEAGCEII 73
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
R+TV +R+A+ I++ L + + PLVADIHF+ A++ E + IR+NPGN+A
Sbjct: 74 RLTVPTERDAENLRNIRDQLRRDGIDTPLVADIHFSVKAAMKAVEFVENIRINPGNYATG 133
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
A+F +YTD++YQ EL + E F+PLV+K G ++RIGTNHGSLSDRI+S G+SP
Sbjct: 134 -AKFSSEDYTDEQYQAELDKVREEFTPLVKKAMSLGVSMRIGTNHGSLSDRIVSRLGNSP 192
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVT 314
GMVE+A EFARI +++ LFSMK+SN VM+QAYRLLVA + YPLHLGVT
Sbjct: 193 EGMVEAALEFARISEDEGYYDILFSMKSSNVRVMIQAYRLLVARADAELRYAYPLHLGVT 252
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG+G++GR+KSA+GIG+LL+DGLGDTIRVSLTE P E+
Sbjct: 253 EAGDGDEGRIKSAMGIGSLLEDGLGDTIRVSLTEDPVNEV 292
>gi|116074926|ref|ZP_01472187.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. RS9916]
gi|116068148|gb|EAU73901.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. RS9916]
Length = 406
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/305 (49%), Positives = 200/305 (65%), Gaps = 5/305 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG+V IGS HP+ VQ+M DT D+ V + R+AD G +
Sbjct: 14 RRYDTQIH---RRVTRTVMVGDVPIGSAHPVAVQSMINEDTLDIDAAVAGIRRLADAGCE 70
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+T A A EI+ +L + N+PLVAD+H +AL VA+ DK+R+NPG F
Sbjct: 71 IVRVTTPSMAHAKAMGEIRAALRAQGCNVPLVADVHHNGIRIALEVAKHVDKVRINPGLF 130
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E++ E+ Q I++ F PLVE K +A+RIG NHGSL++R++ +G
Sbjct: 131 VFDKPDPSRQEFSQSEFDAIGQRIKDDFRPLVELLKAENKALRIGVNHGSLAERMLFTHG 190
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P+GMVESA EF RIC +LDFHN + SMKAS VM+ AYRL+ + G++YPLHLG
Sbjct: 191 DTPKGMVESAMEFVRICDELDFHNIVISMKASRAPVMLAAYRLMADTLDAEGFNYPLHLG 250
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC-RRLANLGMRAAELQ 371
VTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L LG+R ++
Sbjct: 251 VTEAGDGDYGRVKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCFSILQALGLRKTMVE 310
Query: 372 QGVAP 376
P
Sbjct: 311 YVACP 315
>gi|148239811|ref|YP_001225198.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 7803]
gi|147848350|emb|CAK23901.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 7803]
Length = 411
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 152/319 (47%), Positives = 207/319 (64%), Gaps = 5/319 (1%)
Query: 60 LQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAG 119
L AS+ Q+Y IH RR+TRTVMVG+V IGSEHP+ VQ+M DT D+ G
Sbjct: 5 LATASQTGNDTARNQRYDTVIH---RRRTRTVMVGDVPIGSEHPVAVQSMINEDTLDIEG 61
Query: 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRV 178
V + R+AD G ++VR+T A A +I+ +L + +PLVAD+H +AL V
Sbjct: 62 AVAGIRRLADAGCEIVRVTTPSMAHAKAMGDIRAALRAQGCGVPLVADVHHNGIRIALEV 121
Query: 179 AECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238
A+ DK+R+NPG F + + +++ +E++ + I++ F+PLVE K +A+RIG
Sbjct: 122 AKHVDKVRINPGLFVFDKPDPGRQDFSREEFEAIGRRIKDDFAPLVEVLKTQNKALRIGV 181
Query: 239 NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 298
NHGSL++R++ YGD+P GMVESA EF R+C +LDFHN + SMKAS VM+ AYRL+
Sbjct: 182 NHGSLAERMLFTYGDTPEGMVESAMEFVRLCDELDFHNIVISMKASRAPVMLAAYRLMAD 241
Query: 299 EMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC- 357
+ G+ YPLHLGVTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C
Sbjct: 242 TLDREGFHYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCF 301
Query: 358 RRLANLGMRAAELQQGVAP 376
L LG+R ++ P
Sbjct: 302 SILQALGLRKTMVEYVACP 320
>gi|87125792|ref|ZP_01081635.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. RS9917]
gi|86166601|gb|EAQ67865.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. RS9917]
Length = 403
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 196/305 (64%), Gaps = 5/305 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG+V IGSEHP+ VQ+M DT D+ V + R+AD G +
Sbjct: 11 RRYDTQIH---RRVTRTVMVGDVPIGSEHPVVVQSMINEDTLDIEAAVAGIRRLADAGCE 67
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+T A A EI+ +L + +PLVAD+H +AL VA DK+R+NPG F
Sbjct: 68 IVRVTTPSMAHAKAMKEIRAALRSQGCGVPLVADVHHNGIRIALEVANHVDKVRINPGLF 127
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E+T E+ I + F+PLVE K +A+RIG NHGSL++R++ YG
Sbjct: 128 VFDKPDPSRQEFTQAEFDAIGARIRDDFAPLVEVLKAQNKALRIGVNHGSLAERMLFTYG 187
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P+GMVESA EF R+C LDFHN + SMKAS VM+ AYRL+ M G+ YPLHLG
Sbjct: 188 DTPKGMVESAMEFVRLCDALDFHNIVISMKASRAPVMLAAYRLMADTMDAEGFRYPLHLG 247
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC-RRLANLGMRAAELQ 371
VTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L LG+R ++
Sbjct: 248 VTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCFSILQALGLRKTMVE 307
Query: 372 QGVAP 376
P
Sbjct: 308 YVACP 312
>gi|145220416|ref|YP_001131125.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlorobium
phaeovibrioides DSM 265]
gi|145206580|gb|ABP37623.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlorobium
phaeovibrioides DSM 265]
Length = 686
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/276 (50%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
+++ RR TR V G +++G PIRV++MT T DV TV + R+ D G +++R+TV
Sbjct: 1 MYQYRRRLTREVSFGPISLGGYQPIRVESMTNTHTADVDATVAQCRRLRDAGCEIIRLTV 60
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
+++AD+ I++ L + + PLVADIHF+ A++ E + IR+NPGN+A R +
Sbjct: 61 PTEKDADSLRLIRDRLRGEGIDTPLVADIHFSARAAMKAVEFVENIRINPGNYASRPKRS 120
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
+YTD+EY+ EL+++ F PLVEK ++ G ++RIGTNHGSLSDRI+S G+SP GMV
Sbjct: 121 PGEDYTDEEYRAELEYVRGEFLPLVEKARRLGVSMRIGTNHGSLSDRIVSRRGNSPDGMV 180
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLGVTEAGE 318
E+A EFAR+ + +H+ LFSMK+SN VM+QAYRLLV + YPLHLGVTEAG+
Sbjct: 181 EAALEFARMAEEAGYHDILFSMKSSNVRVMIQAYRLLVERADSELRYAYPLHLGVTEAGD 240
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G++GR+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 241 GDEGRIKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 276
>gi|443323667|ref|ZP_21052671.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Gloeocapsa
sp. PCC 73106]
gi|442786649|gb|ELR96378.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Gloeocapsa
sp. PCC 73106]
Length = 406
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 197/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG++ IG +P+ VQ+M DT ++ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVKVGDITIGGSYPVVVQSMINEDTLNIEGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L++ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLAHAKALAEIKEKLIKTYKYVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ + EYT+ E+ + + I E PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KANRTEYTESEFSEIGEQIRETLEPLVVSLRDQNKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC+ LDFHN + S+KA+ VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVESALEFIRICQSLDFHNLVISLKAARVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LGMR ++ P
Sbjct: 257 DGEYGRIKSTTGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGMRKTMVEYVACP 316
>gi|428310685|ref|YP_007121662.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Microcoleus sp. PCC 7113]
gi|428252297|gb|AFZ18256.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Microcoleus sp. PCC 7113]
Length = 405
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 195/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGN+ IG +P+ VQ+M DT DV G+V + R+ + G ++VR+T
Sbjct: 19 TIH---RRKTRPVKVGNITIGGGYPVVVQSMINEDTLDVEGSVAAIRRLHEIGCEIVRVT 75
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L+Q +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 76 VPSMAHAKALAEIKQKLIQTYQEVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 135
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT E+++ + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 136 KADRNEYTQAEFEEIGEKIRETLEPLVISLRDQGKALRIGVNHGSLAERMLFTYGDTPEG 195
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 196 MVESALEFIRICESLDFRNIVISLKASRAPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 255
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS G+ LL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 256 DGEYGRIKSTAGLAPLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 315
>gi|209523493|ref|ZP_03272048.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arthrospira maxima CS-328]
gi|376006324|ref|ZP_09783605.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arthrospira sp. PCC 8005]
gi|423064688|ref|ZP_17053478.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrospira
platensis C1]
gi|209496235|gb|EDZ96535.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arthrospira maxima CS-328]
gi|375325215|emb|CCE19358.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arthrospira sp. PCC 8005]
gi|406713931|gb|EKD09099.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrospira
platensis C1]
Length = 405
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 192/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VGN+ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 22 RRQTRPVRVGNITIGGGYPVVVQSMINEDTMDIEGSVASIRRLHEMGCEIVRVTVPSVGH 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L +PLVAD+H +AL VA+ DK+R+NPG + + + ++ E
Sbjct: 82 AKAVGEIKQKLAATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKGDRSE 141
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD E+Q+ + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 142 YTDTEFQEIGEKIRETLKPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 201
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 202 EFIRICESLDFQNLVISLKASRVPVMLAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 261
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 262 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYVACP 315
>gi|194333124|ref|YP_002014984.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Prosthecochloris aestuarii DSM 271]
gi|194310942|gb|ACF45337.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Prosthecochloris aestuarii DSM 271]
Length = 677
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 198/276 (71%), Gaps = 2/276 (0%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
+++ RR TR V GN+++G PIRV++MTT T D A +VE+ R+ + G +++R+TV
Sbjct: 1 MYQYHRRLTREVGFGNISLGGYQPIRVESMTTTHTMDTAASVEQCRRLYEAGCEIIRLTV 60
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
+++A+ I+ L + PLVADIHF+ A++ E D IR+NPGN+A+R+ +F
Sbjct: 61 PTEKDAENLKYIREQLRRDGIETPLVADIHFSRKAAMKAVEYVDNIRINPGNYANRK-KF 119
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
EY+D ++Q EL+ + + F PL+ K +++G ++RIGTNHGSLSDRI+S YG++P GMV
Sbjct: 120 SNPEYSDADFQAELEKVRDEFIPLIAKAREFGVSMRIGTNHGSLSDRIVSRYGNTPEGMV 179
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVTEAGE 318
E+A EFARIC + LFSMK+SN VM++AYR+LV + + YPLHLGVTEAG+
Sbjct: 180 EAALEFARICESEGYEEILFSMKSSNVRVMIEAYRMLVVKSDAQLRNAYPLHLGVTEAGD 239
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G++GR+KS++GIG LL++GLGDTIRVSLTE P E+
Sbjct: 240 GDEGRIKSSMGIGALLEEGLGDTIRVSLTEDPVNEV 275
>gi|86607623|ref|YP_476385.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|123504173|sp|Q2JPZ9.1|ISPG_SYNJB RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|86556165|gb|ABD01122.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 409
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/283 (50%), Positives = 189/283 (66%), Gaps = 3/283 (1%)
Query: 73 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGA 132
+Q Y E ++ RR TRTV V +V IGS+HP+ VQ+M DT DV V + R+ + G+
Sbjct: 12 QQPYPEPVYP--RRPTRTVAVADVLIGSQHPVVVQSMINEDTLDVDAAVAGIRRLHEAGS 69
Query: 133 DLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGN 191
++VR+TV A A I+ L+Q +PLVAD+H +AL VA+ DK+R+NPG
Sbjct: 70 EIVRVTVPSMAHAKAMEAIREKLIQTYKPVPLVADVHHNGIKIALEVAKYVDKVRINPGL 129
Query: 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY 251
F + Q + EYT E++ I E F+PLV+ K +A+RIG NHGSL++R++ Y
Sbjct: 130 FVFEKPQPGRTEYTQAEFEAIRNKIRETFTPLVQTLKAQNKALRIGVNHGSLAERMLFTY 189
Query: 252 GDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311
GD+P GMVESA EFA+IC + DFHN + S KAS P VM+ AYRL G +YP HL
Sbjct: 190 GDTPEGMVESALEFAQICAEQDFHNVVLSFKASRPQVMLAAYRLAARRFDALGLNYPFHL 249
Query: 312 GVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
GVTEAG+GE GR+KSA+GIGTLL +G+GDTIRVSLTE PEKEI
Sbjct: 250 GVTEAGDGEYGRIKSAVGIGTLLAEGIGDTIRVSLTEAPEKEI 292
>gi|409993502|ref|ZP_11276641.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrospira
platensis str. Paraca]
gi|291566342|dbj|BAI88614.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrospira
platensis NIES-39]
gi|409935650|gb|EKN77175.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrospira
platensis str. Paraca]
Length = 406
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 191/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VGN+ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 23 RRQTRPVRVGNITIGGGYPVVVQSMINEDTMDIEGSVASIRRLHEMGCEIVRVTVPSVGH 82
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L +PLVAD+H +AL VA+ DK+R+NPG + + + ++ E
Sbjct: 83 AKAVGEIKQKLAATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKSDRSE 142
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD E+Q+ + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 143 YTDTEFQEIGEKIRETLKPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 202
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 203 EFIRICESLDFQNLVISLKASRVPVMLAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 262
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 263 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|189499291|ref|YP_001958761.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlorobium
phaeobacteroides BS1]
gi|189494732|gb|ACE03280.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Chlorobium
phaeobacteroides BS1]
Length = 686
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/282 (49%), Positives = 197/282 (69%), Gaps = 2/282 (0%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q + S+++ RR TR V G++++G P+RV++MTT T D + +VE+ R+ + G +
Sbjct: 2 QNFPISMYQYSRRLTREVGFGSLSLGGYQPVRVESMTTTHTMDTSASVEQCRRLHEAGCE 61
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193
++R+TV +++A+ I++ L + PLVADIHF+ AL+ E + +R+NPGNFA
Sbjct: 62 IIRLTVPTEKDAENLKTIRDQLRRDGVATPLVADIHFSQKAALKAVEFVENVRINPGNFA 121
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
+ + +F EYT Y EL+ + E F PL+ K K +G ++RIGTNHGSLSDRI+S YG+
Sbjct: 122 NTQ-KFTNEEYTAQSYDSELEKVREAFLPLIGKAKAFGVSMRIGTNHGSLSDRIVSRYGN 180
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHLG 312
+P GMVE+A EFARIC +++FLFSMK+SN VM+QAYR LVA YPLHLG
Sbjct: 181 TPEGMVEAALEFARICEDEGYYDFLFSMKSSNVRVMIQAYRHLVARADTELRHAYPLHLG 240
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
VTEAG+G++GR+KSA+G G LL++GLGDTIRVSLTE P E+
Sbjct: 241 VTEAGDGDEGRIKSAMGTGALLEEGLGDTIRVSLTEDPVNEV 282
>gi|428776582|ref|YP_007168369.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Halothece sp.
PCC 7418]
gi|428690861|gb|AFZ44155.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Halothece sp.
PCC 7418]
Length = 403
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/300 (49%), Positives = 198/300 (66%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 16 TIH---RRKTRPVPVGDVTIGGGHPVVVQSMINEDTLDIEGSVNGIRRLHEIGCEIVRVT 72
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +IK L + +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 73 VPSMAHARALADIKTRLQETYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 132
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 133 KTDRTEYSQAEFDEIGEKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 192
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF +IC L+FHN + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 193 MVESALEFIKICESLNFHNLIISLKASRVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAG 252
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTEPPEKEI C L +LG+R ++ P
Sbjct: 253 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEPPEKEIPVCYSILQSLGLRKTMVEYVACP 312
>gi|428220313|ref|YP_007104483.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. PCC 7502]
gi|427993653|gb|AFY72348.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. PCC 7502]
Length = 412
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 194/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D++G++ + R+ + G ++VR+TV
Sbjct: 29 RRKTRPVKVGSVTIGGNNPVVVQSMINEDTLDISGSIAGIRRLHEIGCEIVRVTVPSLAH 88
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EI+ L++ N+P+VAD+H +AL VA+ DK+R+NPG + + + + E
Sbjct: 89 AHALAEIRAGLIRTYQNVPIVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKPNRTE 148
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+Q+ I E SPLV + G+A+RIG NHGSL++R++ YGD+P+GMVESA
Sbjct: 149 YTASEFQEIGDKIAETLSPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPQGMVESAI 208
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VMV AY+L+V M G DYPLHLGVTEAG+GE GR
Sbjct: 209 EFIRICESLDFRNLVISLKASRVPVMVAAYKLMVKRMDELGMDYPLHLGVTEAGDGEYGR 268
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 269 IKSTAGIATLLSQGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 322
>gi|78187812|ref|YP_375855.1| IspG protein [Chlorobium luteolum DSM 273]
gi|78167714|gb|ABB24812.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Chlorobium
luteolum DSM 273]
Length = 688
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/278 (50%), Positives = 195/278 (70%), Gaps = 6/278 (2%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
+++ RR TR V G +++G PIRV++M T D +VE+ R+ D G +++R+TV
Sbjct: 1 MYEYRRRLTREVPFGPISLGGYLPIRVESMLNTHTSDTRASVEQCRRLHDAGCEIIRLTV 60
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQF 199
+++A+ I++ L + PLVADIHF+ A++ E + IR+NPGN+A R+ +F
Sbjct: 61 PTEKDAENLRAIRDQLRRDGIRTPLVADIHFSARAAMKAVEFVENIRINPGNYATRK-KF 119
Query: 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMV 259
+YT+DEYQ+EL H+ + F PLVEK + G ++RIGTNHGSLSDRI+S G+SP GMV
Sbjct: 120 SNGDYTEDEYQQELLHVRQEFLPLVEKARSLGVSMRIGTNHGSLSDRIVSRRGNSPDGMV 179
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM---YVHGWDYPLHLGVTEA 316
E+A EFARIC +++ LFSMK+SN VM+QAYRLLV +H YPLHLGVTEA
Sbjct: 180 EAALEFARICEDAGYYDILFSMKSSNVRVMIQAYRLLVQRADKELLHA--YPLHLGVTEA 237
Query: 317 GEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G+G++ R+KSA+GIG LL+DGLGDTIRVSLTE P E+
Sbjct: 238 GDGDEARVKSAMGIGALLEDGLGDTIRVSLTEDPVNEV 275
>gi|428773373|ref|YP_007165161.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyanobacterium stanieri PCC 7202]
gi|428687652|gb|AFZ47512.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyanobacterium stanieri PCC 7202]
Length = 405
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 148/300 (49%), Positives = 197/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 19 TIH---RRKTRAVKVGNVTIGGNNPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 75
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 76 VPSMAHARALAEIKQKLADTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 135
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT+ E+++ I+E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 136 KGDRTEYTETEFKEIGAKIKETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 195
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF +IC LDF N + S+KAS VM+ AYRL+V +M G DYPLHLGVTEAG
Sbjct: 196 MVESALEFIKICESLDFKNLIISLKASRVPVMLSAYRLMVKKMDELGMDYPLHLGVTEAG 255
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 256 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 315
>gi|354568651|ref|ZP_08987814.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fischerella
sp. JSC-11]
gi|353539905|gb|EHC09385.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fischerella
sp. JSC-11]
Length = 408
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 191/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGNV IG HP+ VQ+M DT DV G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGNVTIGGGHPVVVQSMINEDTLDVDGSVAAIRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AKALAEIKQKLIKTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNPNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMV+SA
Sbjct: 145 YTKVEFDEIGEKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVQSAI 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNLVISLKASRVPVMIAAYRLMVQRMDELGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTESPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|17229993|ref|NP_486541.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nostoc sp.
PCC 7120]
gi|20138560|sp|P58666.1|ISPG_ANASP RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|17131593|dbj|BAB74200.1| all2501 [Nostoc sp. PCC 7120]
Length = 408
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 192/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSIAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AVALAEIKQKLIKTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+++ + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTQAEFEEIGEKIRETLAPLVITLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNIVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|440681630|ref|YP_007156425.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anabaena
cylindrica PCC 7122]
gi|428678749|gb|AFZ57515.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anabaena
cylindrica PCC 7122]
Length = 408
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 192/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGDVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSLGH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AKALAEIKQKLIKTYRDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTSRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E +PLV + G+++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTKAEFDEIGEKISETLAPLVVSLRDQGKSMRIGVNHGSLAERMLFTYGDTPEGMVESAI 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDFHN + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFHNLVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|434395313|ref|YP_007130260.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gloeocapsa
sp. PCC 7428]
gi|428267154|gb|AFZ33100.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gloeocapsa
sp. PCC 7428]
Length = 408
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/300 (50%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGNV IG +P+ VQ+M DT DV G+V + R+ + G ++VR+T
Sbjct: 22 TIH---RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDVDGSVAAIRRLHEIGCEIVRVT 78
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L Q +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 79 VPSMAHAKALAEIKQKLHQTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 138
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 139 KTDRTEYTQAEFDEIGEKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 198
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC LDF N + S+KAS VM+ AYRL+ M G DYPLHLGVTEAG
Sbjct: 199 MVESALEFIRICESLDFRNLVVSLKASRVPVMLAAYRLMAQRMDELGMDYPLHLGVTEAG 258
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 259 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|300868031|ref|ZP_07112669.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Oscillatoria
sp. PCC 6506]
gi|300333951|emb|CBN57847.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Oscillatoria
sp. PCC 6506]
Length = 406
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG +PI VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVKVGSVTIGGGYPIVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSMAHAKALAEIKQKLHATYQVVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT DE+ + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYTPDEFDEIGAKIRETLEPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF +IC LDF N + SMKAS VM+ AYRL+ M HG DYPLHLGVTEAG
Sbjct: 197 MVESALEFIKICESLDFRNIVISMKASRVPVMLAAYRLMARRMDEHGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DGLGDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGLGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|282896992|ref|ZP_06304994.1| IspG protein [Raphidiopsis brookii D9]
gi|281197644|gb|EFA72538.1| IspG protein [Raphidiopsis brookii D9]
Length = 391
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 192/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V V R+ + G ++VR+TV
Sbjct: 25 RRKTRAVKVGDVIIGGGYPVVVQSMINEDTLDIDGSVSAVRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L Q ++P+VAD+H +AL VA+ +K+R+NPG + + ++ E
Sbjct: 85 AKALAEIKQKLQQTYRDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNSDRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTKTEFDEIGEKIRETLAPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC L+F+N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLNFYNIVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|428781121|ref|YP_007172907.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dactylococcopsis salina PCC 8305]
gi|428695400|gb|AFZ51550.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dactylococcopsis salina PCC 8305]
Length = 407
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 148/300 (49%), Positives = 197/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RR+TR V VGNV IG HP+ VQ+M DT DV G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRQTRPVPVGNVTIGGGHPVVVQSMINEDTLDVEGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A +IK L + +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSMAHGRALADIKARLQETYQPVPLVADVHHNGLKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT+ E+ + Q I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KPDRTEYTEAEFNEIGQKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF +IC LD+ N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVESALEFIKICESLDYRNLIISLKASRVPVMLAAYRLMVKRMDDLGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTEPPEKEI C L +LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEPPEKEIPVCYSILQSLGLRKTMVEYVACP 316
>gi|75906658|ref|YP_320954.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anabaena
variabilis ATCC 29413]
gi|123610732|sp|Q3MG27.1|ISPG_ANAVT RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|75700383|gb|ABA20059.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anabaena
variabilis ATCC 29413]
Length = 408
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 191/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSIAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L+ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AVALAEIKQKLITTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+++ + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTQAEFEEIGEKIRETLAPLVITLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNIVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|428297590|ref|YP_007135896.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Calothrix sp.
PCC 6303]
gi|428234134|gb|AFY99923.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Calothrix sp.
PCC 6303]
Length = 408
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 191/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG++ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGDITIGGGYPVVVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L Q ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AKALAEIKQKLKQTYKDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPSTTRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E PLV + G+++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTPAEFAEIGEKIRETLEPLVVSLRDQGKSMRIGVNHGSLAERMLFTYGDTPEGMVESAI 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC LDFHN + SMKAS VMV AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIKICESLDFHNIVISMKASRVPVMVAAYRLMVRRMDELGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLTDGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|427705975|ref|YP_007048352.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nostoc sp.
PCC 7107]
gi|427358480|gb|AFY41202.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nostoc sp.
PCC 7107]
Length = 408
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGNV IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGNVTIGGGHPVVVQSMINEDTLDIDGSVAAIRRLHEVGCEIVRVTVPSLAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK +++ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AVALAEIKQKIIKTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+++ I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTQAEFEEIGDKIRETLEPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + SMKAS VMV AYRLL M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNLVVSMKASRVPVMVAAYRLLAKRMDELGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PE EI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPENEIPVCYSILQALGLRKTMVEYVACP 318
>gi|159903331|ref|YP_001550675.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9211]
gi|159888507|gb|ABX08721.1| GcpE protein [Prochlorococcus marinus str. MIT 9211]
Length = 412
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 143/283 (50%), Positives = 191/283 (67%), Gaps = 6/283 (2%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
++Y IH RR TRTVMVG++ IGS HP+ VQ+M DT D+ + + R+ + G +
Sbjct: 16 RRYSTQIH---RRPTRTVMVGDIPIGSAHPVSVQSMINEDTLDIEASTAAIRRLHEIGCE 72
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYN-IPLVADIHF-APSVALRVAECFDKIRVNPGN 191
+VR+TV A A EIK L ++NY +PLVAD+H +AL VA+ DK+R+NPG
Sbjct: 73 IVRLTVPSLSHAKAVGEIKQKL-ERNYKPVPLVADVHHNGMKIALEVAKHVDKVRINPGL 131
Query: 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY 251
F + E++++E Q + I F P+V K +A+RIG NHGSL++R++ Y
Sbjct: 132 FVFETPDPNRTEFSEEEMQLIKEKIVSKFEPIVNTLKAQNKALRIGVNHGSLAERMLFAY 191
Query: 252 GDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311
GD+P GMVESA EF RIC LDFHN + SMKAS P VM+ AYR++ M G++YPLHL
Sbjct: 192 GDTPLGMVESAMEFVRICDSLDFHNIVISMKASRPPVMLAAYRMMADRMDKEGFNYPLHL 251
Query: 312 GVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
GVTEAG+G+ GR+KS +GIGTLL +G+GDTIRVSLTE PEKEI
Sbjct: 252 GVTEAGDGDYGRIKSTVGIGTLLSEGIGDTIRVSLTEAPEKEI 294
>gi|428770151|ref|YP_007161941.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyanobacterium aponinum PCC 10605]
gi|428684430|gb|AFZ53897.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyanobacterium aponinum PCC 10605]
Length = 405
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/300 (49%), Positives = 195/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGNV +G +P+ VQ+M DT DV +V + R+ + G ++VR+T
Sbjct: 19 TIH---RRKTRPVKVGNVTVGGNNPVVVQSMINEDTLDVDASVAAIRRLHEIGCEIVRVT 75
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L Q +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 76 VPSLAHAKAVGEIKAKLAQTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 135
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
++ Y+ +E+ + + I+E PLV ++ G+A+RIG NHGSLS+R++ YGD+P G
Sbjct: 136 SSDRTSYSAEEFAQIGEKIKETLEPLVVSLREQGKAMRIGVNHGSLSERMLFTYGDTPEG 195
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF +IC LDF N + SMKAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 196 MVESALEFIKICESLDFRNLVISMKASRVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAG 255
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 256 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 315
>gi|124025441|ref|YP_001014557.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. NATL1A]
gi|123960509|gb|ABM75292.1| GcpE [Prochlorococcus marinus str. NATL1A]
Length = 407
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/299 (49%), Positives = 196/299 (65%), Gaps = 7/299 (2%)
Query: 57 IAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKD 116
IA L+ EG+ L Q+Y I +RR TR VMVG++ IG ++P+RVQ+M DT D
Sbjct: 2 IATLEKNMEGNNL---SQRYSTRI---IRRDTRPVMVGDIGIGGDNPVRVQSMINEDTMD 55
Query: 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175
+ G+ + R+ + G ++VR+TV A A EIK L +PLVAD+H +A
Sbjct: 56 IEGSTAAIRRLHEVGCEIVRLTVPTLASAKAVGEIKKLLASTYQPVPLVADVHHNGMKIA 115
Query: 176 LRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235
L VA+ DK+R+NPG F + + E+T DE + I + F P+V K+ +A+R
Sbjct: 116 LEVAKHVDKVRINPGLFVFEKPDPNRTEFTKDEIDVIKEKIIQKFKPIVNTLKEQNKALR 175
Query: 236 IGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRL 295
IG NHGSLS+R++ YGD+P GMVESA EF RIC LDFHN + SMKAS VM+ AYR+
Sbjct: 176 IGVNHGSLSERMLFAYGDTPFGMVESAMEFIRICHSLDFHNIVISMKASRAPVMLAAYRM 235
Query: 296 LVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+ M G++YPLHLGVTEAG+G+ GR+KS +GIGTLL +G+GDTIRVSLTE PEKEI
Sbjct: 236 MADTMDKEGFNYPLHLGVTEAGDGDYGRIKSTVGIGTLLSEGIGDTIRVSLTEAPEKEI 294
>gi|119489558|ref|ZP_01622318.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Lyngbya sp.
PCC 8106]
gi|119454470|gb|EAW35618.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Lyngbya sp.
PCC 8106]
Length = 406
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/297 (49%), Positives = 193/297 (64%), Gaps = 2/297 (0%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
K RR+TR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 20 KIHRRQTRPVQVGDVTIGGGHPVVVQSMINEDTMDIDGSVAGIRRLHEIGCEIVRVTVPS 79
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFE 200
A A EIK L Q +PLVAD+H +AL VA+ DK+R+NPG + + + +
Sbjct: 80 VGHAKAVGEIKQKLAQTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKSD 139
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVE 260
+ EYT E+ + + I E PLV ++ G+A+RIG NHGSL++R++ YGD+P GMVE
Sbjct: 140 RNEYTQAEFDEIGEKIRETLEPLVVSLREQGKAMRIGVNHGSLAERMLFTYGDTPEGMVE 199
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA EF RIC LDF N + S+KAS VM+ AYRL+ M G DYPLHLGVTEAG+GE
Sbjct: 200 SALEFIRICESLDFQNLVISLKASRVPVMLAAYRLMAQRMDELGMDYPLHLGVTEAGDGE 259
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 260 YGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|67925456|ref|ZP_00518798.1| IspG protein [Crocosphaera watsonii WH 8501]
gi|416409857|ref|ZP_11688552.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Crocosphaera watsonii WH 0003]
gi|67852699|gb|EAM48116.1| IspG protein [Crocosphaera watsonii WH 8501]
gi|357260544|gb|EHJ09944.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Crocosphaera watsonii WH 0003]
Length = 412
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 200/312 (64%), Gaps = 5/312 (1%)
Query: 67 SPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMR 126
+P ++ + + +IH RRKTR V VGN+ IG P+ VQ+M DT D+ G+V + R
Sbjct: 9 TPKIISQPDFDTTIH---RRKTRPVKVGNITIGGGFPVVVQSMINEDTLDIEGSVAAIRR 65
Query: 127 IADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKI 185
+ + G ++VR+TV A A IK L Q +PLVAD+H ++AL VA+ DK+
Sbjct: 66 LHEIGCEIVRVTVPSMGHAKALATIKEKLAQVYQPVPLVADVHHNGLNIALEVAKHVDKV 125
Query: 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245
R+NPG + + + + EY+ +E++K I + PLV + G+A+RIG NHGSL++
Sbjct: 126 RINPGLYVFEKPRATRTEYSQEEFEKIGDKIRQTLEPLVISLRDQGKAMRIGVNHGSLAE 185
Query: 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW 305
R++ YGD+P GMVESA EF IC LDF+N + S+KAS VM+ AYRL+V M G
Sbjct: 186 RMLFTYGDTPEGMVESALEFIHICESLDFYNLIVSLKASRVPVMLAAYRLMVKRMDELGM 245
Query: 306 DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
DYPLHLGVTEAG+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG
Sbjct: 246 DYPLHLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALG 305
Query: 365 MRAAELQQGVAP 376
+R ++ P
Sbjct: 306 LRKTMVEYVACP 317
>gi|218442210|ref|YP_002380539.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. PCC 7424]
gi|226722782|sp|B7KJJ4.1|ISPG_CYAP7 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|218174938|gb|ACK73671.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. PCC 7424]
Length = 406
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 198/300 (66%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG++ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRGVKVGDITIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L++ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSMAHAKALAEIKEKLIKTYKAVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT E+++ + I E PLV K+ +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 RADRTEYTPTEFEEIGEKIRETLKPLVLTLKEQDKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC L+F+N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVESALEFIRICESLEFYNIVISLKASRVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|428307743|ref|YP_007144568.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Crinalium
epipsammum PCC 9333]
gi|428249278|gb|AFZ15058.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Crinalium
epipsammum PCC 9333]
Length = 411
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGN+ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGNITIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSLAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L+ +PLVAD+H +AL VA+ DK+R+NPG + + + ++ E
Sbjct: 85 AKALAEIKQKLIATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKADRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
Y E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YAQAEFDEIGEKIRETLEPLVVSLRDQGKAMRIGVNHGSLAERMLFSYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNLIISMKASRVPVMLAAYRLMAQRMDECGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|33863049|ref|NP_894609.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9313]
gi|50400961|sp|Q7V7G9.1|ISPG_PROMM RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|33634966|emb|CAE20952.1| GcpE protein [Prochlorococcus marinus str. MIT 9313]
Length = 406
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/325 (47%), Positives = 205/325 (63%), Gaps = 13/325 (4%)
Query: 54 SSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTND 113
S+ +AE Q ++ ++Y IH RR TRTV VG V IGS+HP+RVQ+M D
Sbjct: 2 SATMAEYQSSTS--------RRYDTQIH---RRVTRTVNVGGVLIGSDHPVRVQSMINED 50
Query: 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-AP 172
T DV G + R+ + G ++VR+TV A A EI L + +PLVAD+H
Sbjct: 51 TLDVEGATAGIRRLHEAGCEIVRLTVPSLGHAKAVGEICQRLRETYQPVPLVADVHHNGM 110
Query: 173 SVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232
+AL VA DK+R+NPG F +A ++ E++ +E + I E F PLV + K+ +
Sbjct: 111 KIALEVANHVDKVRINPGLFVFDKADPDRTEFSGEEIASIRERIAENFEPLVTRLKQQDK 170
Query: 233 AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQA 292
A+RIG NHGSL++R++ YGD+P GMVESA EF RIC LDFHN + SMKAS VM+ A
Sbjct: 171 ALRIGVNHGSLAERMLFAYGDTPLGMVESAMEFVRICDSLDFHNIVISMKASRAPVMLAA 230
Query: 293 YRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEK 352
YRL+ M G++YPLHLGVTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEK
Sbjct: 231 YRLMADTMDQEGFNYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEK 290
Query: 353 EIDPCRR-LANLGMRAAELQQGVAP 376
EI C L ++G+R ++ P
Sbjct: 291 EIPVCYSILQSIGLRKTMVEYISCP 315
>gi|33240465|ref|NP_875407.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|50400962|sp|Q7VBS7.1|ISPG_PROMA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|33237993|gb|AAQ00060.1| deoxyxylulose pathway of isoprenoid biosynthesis-related protein
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 407
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/271 (51%), Positives = 183/271 (67%), Gaps = 1/271 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR+VMVGN+ IGS++P+ VQ+M DT D+ + + R+ + G ++VR+TV
Sbjct: 24 RRKTRSVMVGNIGIGSDYPVAVQSMINEDTLDIEASTSAIRRLHEIGCEIVRLTVPSLSH 83
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L Q +PLVAD+H +AL VA+ DK+R+NPG F + E
Sbjct: 84 AKAVGEIKRRLEQNYLPVPLVADVHHNGMKIALEVAKHVDKVRINPGLFVFSNPDPSRTE 143
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
+++ E + I F P+V K +A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 144 FSNSEISAIKEKIINNFEPIVNTLKAQNKALRIGVNHGSLAERMLFQYGDTPLGMVESAM 203
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDFHN + SMKAS P VM+ AYRL+ M G++YPLHLGVTEAG+G+ GR
Sbjct: 204 EFVRICDSLDFHNIVISMKASRPPVMLAAYRLMADAMDKEGFNYPLHLGVTEAGDGDYGR 263
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS +GIGTLL +GLGDTIRVSLTE PEKEI
Sbjct: 264 IKSTVGIGTLLTEGLGDTIRVSLTEAPEKEI 294
>gi|332710435|ref|ZP_08430382.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Moorea
producens 3L]
gi|332350766|gb|EGJ30359.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Moorea
producens 3L]
Length = 363
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RR+TR V V NV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 19 TIH---RRQTRPVRVANVTIGGGYPVVVQSMINEDTLDINGSVAAIRRLHEIGCEIVRVT 75
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L ++PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 76 VPSMAHAKALAEIKEKLAATYQSVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 135
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ + EYT+ E+++ + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 136 KANRSEYTEAEFEEIGEKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 195
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC LDF N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 196 MVESALEFIRICESLDFRNLVISLKASRVPVMLAAYRLMVRRMNQLGMDYPLHLGVTEAG 255
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 256 DGEYGRIKSTAGIATLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 315
>gi|443476946|ref|ZP_21066825.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudanabaena
biceps PCC 7429]
gi|443018007|gb|ELS32335.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudanabaena
biceps PCC 7429]
Length = 422
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/331 (44%), Positives = 205/331 (61%), Gaps = 12/331 (3%)
Query: 48 RNSSNSSSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQ 107
+N + + + A +P +GS E++ VRRKTR V VGN+ IG P+ VQ
Sbjct: 12 QNGTQNGTQKATAEPIVDGS----------ENLGVIVRRKTRPVQVGNITIGGGAPVVVQ 61
Query: 108 TMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVAD 167
+M DT D+ G+V + R+ + G ++VR+TV A A EI+ L + ++PLVAD
Sbjct: 62 SMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSMAHAAALSEIRQKLKRTYLDVPLVAD 121
Query: 168 IHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEK 226
+H +AL VA+ K+R+NPG + + + + EYT E+ + + + + PLV
Sbjct: 122 VHHNGMKIALEVAKHIHKVRINPGLYVFEKPKANRTEYTQSEFDEIAEKVRDTLKPLVLS 181
Query: 227 CKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286
K+ G+A+RIG NHGSL++R++ YGD+P+GMVESA EF RIC LDF N + SMKAS
Sbjct: 182 LKEQGKAMRIGVNHGSLAERMLFTYGDTPQGMVESAIEFIRICEDLDFKNIVISMKASRV 241
Query: 287 VVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSL 346
VM+ AY+L+ M G DYPLHLGVTEAG+GE GR+KS GI TLL G+GDTIRVSL
Sbjct: 242 PVMIAAYQLMAKRMDQLGMDYPLHLGVTEAGDGEYGRIKSTAGIATLLSQGIGDTIRVSL 301
Query: 347 TEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
TE PEKEI C L +LG+R ++ P
Sbjct: 302 TEAPEKEIPVCYSILQSLGLRKTMVEYVACP 332
>gi|434406189|ref|YP_007149074.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Cylindrospermum stagnale PCC 7417]
gi|428260444|gb|AFZ26394.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Cylindrospermum stagnale PCC 7417]
Length = 435
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 142/294 (48%), Positives = 194/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 52 RRKTRPVKVGDVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSLGH 111
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +AL V++ +K+R+NPG + + + E
Sbjct: 112 AKALAEIKQKLIKTYRDVPIVADVHHNGMKIALEVSKHIEKVRINPGLYVFEKPNTNRTE 171
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT +E+ + + I E +PLV + G+++RIG NHGSL++R++ YGD+P+GMVESA
Sbjct: 172 YTQNEFDEIGEKIRETLAPLVVSLRDQGKSMRIGVNHGSLAERMLFTYGDTPQGMVESAI 231
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC L+FHN + SMKAS VMV AYRL+ + G DYPLHLGVTEAG+GE GR
Sbjct: 232 EFIRICESLNFHNLVISMKASRVPVMVAAYRLMAKRLDDLGMDYPLHLGVTEAGDGEYGR 291
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 292 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 345
>gi|282900471|ref|ZP_06308420.1| IspG protein [Cylindrospermopsis raciborskii CS-505]
gi|281194664|gb|EFA69612.1| IspG protein [Cylindrospermopsis raciborskii CS-505]
Length = 408
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 191/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRAVKVGDVIIGGGYPVVVQSMINEDTLDIDGSVSAIRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L Q ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AKALAEIKQKLQQTYRDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTKTEFDEIGEKIRETLAPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC L+F+N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLNFYNIVISMKASRVPVMVAAYRLMSKRMDDLGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTESPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|428201337|ref|YP_007079926.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pleurocapsa sp. PCC 7327]
gi|427978769|gb|AFY76369.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pleurocapsa sp. PCC 7327]
Length = 407
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 192/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 24 RRKTRPVKVGDVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSMAH 83
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK+ L + +PLVAD+H +AL VA+ DK+RVNPG + + + + E
Sbjct: 84 AKAMAEIKDKLTKTYKPVPLVADVHHNGLKIALEVAKHVDKVRVNPGLYVFEKPKANRTE 143
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E PLV ++ G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 144 YTQAEFDEIGEKIRETLEPLVISLREQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAI 203
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 204 EFIRICESLDFKNLVISLKASRVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAGDGEYGR 263
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 264 IKSTAGIATLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 317
>gi|124023138|ref|YP_001017445.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. MIT 9303]
gi|123963424|gb|ABM78180.1| GcpE protein [Prochlorococcus marinus str. MIT 9303]
Length = 406
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 198/312 (63%), Gaps = 6/312 (1%)
Query: 67 SPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMR 126
SP+ R +Y IH RR TRTV VG V IGS+HP+RVQ+M DT DV G + R
Sbjct: 8 SPISTSR-RYDTQIH---RRVTRTVNVGGVLIGSDHPVRVQSMINEDTLDVEGATAGIRR 63
Query: 127 IADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKI 185
+ + G ++ R+TV A A EI L Q +PLVAD+H +AL VA+ DK+
Sbjct: 64 LHEIGCEIARLTVPSLGHAKAVGEICKRLKQTYQPVPLVADVHHNGMKIALEVAKHVDKV 123
Query: 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245
R+NPG F +A + E++ +E + I E F PLV K+ +A+RIG NHGSL++
Sbjct: 124 RINPGLFVFDKADPNRTEFSSEEIASIRERIAENFEPLVTLLKQQDKALRIGVNHGSLAE 183
Query: 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW 305
R++ YGD+P GMVESA EF RIC LDFHN + SMKAS VM+ AYRL+ M G+
Sbjct: 184 RMLFAYGDTPLGMVESAMEFVRICDALDFHNIVISMKASRAPVMLAAYRLMADTMDQEGF 243
Query: 306 DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+YPLHLGVTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L +LG
Sbjct: 244 NYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLG 303
Query: 365 MRAAELQQGVAP 376
+R ++ P
Sbjct: 304 LRKTMVEYISCP 315
>gi|313205142|ref|YP_004043799.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paludibacter
propionicigenes WB4]
gi|312444458|gb|ADQ80814.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paludibacter
propionicigenes WB4]
Length = 595
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 142/306 (46%), Positives = 191/306 (62%), Gaps = 1/306 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + T+ +G + +G P+RVQ+M DT DV +V + +RI + G ++VR T QG RE
Sbjct: 12 RRPSDTIQIGKLLLGGNQPVRVQSMANTDTNDVENSVAQCLRIVEAGGEMVRFTTQGVRE 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A++ +I +L K +PLVADIHF + A A +K+R+NPGN+ + +Y
Sbjct: 72 AESIGKIHEALRDKGCEVPLVADIHFNANAADVAATNVEKVRINPGNYVGSIKIGDTSDY 131
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
T +E++ E Q I F P + CK A+RIG NHGSLS+R+M+ YGD+ GMVES E
Sbjct: 132 TAEEFELEYQKIRARFIPFLNICKANNTAIRIGVNHGSLSERMMNKYGDTSLGMVESCME 191
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F +IC + +F N + SMK SN V+MV RLLV M G +PLHLGVTEAG+GEDGR+
Sbjct: 192 FLKICNEENFSNVVISMKTSNTVMMVHTVRLLVDRMEKEGLHFPLHLGVTEAGDGEDGRI 251
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG LL DG+GDTIRVSL+E PE EI P RL + QQ + E
Sbjct: 252 KSAVGIGGLLADGIGDTIRVSLSEEPEAEI-PVGRLLVSYVAGRGKQQPIVATEHVLHSR 310
Query: 385 FDFQRR 390
F++ RR
Sbjct: 311 FEYSRR 316
>gi|172037227|ref|YP_001803728.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. ATCC 51142]
gi|354553888|ref|ZP_08973194.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. ATCC 51472]
gi|226741009|sp|B1WQF1.1|ISPG_CYAA5 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|171698681|gb|ACB51662.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. ATCC 51142]
gi|353554605|gb|EHC23995.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. ATCC 51472]
Length = 404
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 198/312 (63%), Gaps = 5/312 (1%)
Query: 67 SPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMR 126
+P + ++ +IH RRKTR V VG++ IG P+ VQ+M DT D+ G+V + R
Sbjct: 6 TPQTTSKPEFDTTIH---RRKTRPVKVGDITIGGGFPVVVQSMINEDTLDIEGSVSAIRR 62
Query: 127 IADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKI 185
+ + G ++VR+TV A A IK L Q +PLVAD+H +AL VA+ DK+
Sbjct: 63 LHEMGCEIVRVTVPSMAHAKALATIKEKLAQVYQPVPLVADVHHNGLKIALEVAKHVDKV 122
Query: 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245
R+NPG + + + EYT E+++ + I + PLV + G+A+RIG NHGSL++
Sbjct: 123 RINPGLYVFEKPSPTRSEYTQAEFEEIGEKIRQTLEPLVISLRDQGKAMRIGVNHGSLAE 182
Query: 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW 305
R++ YGD+P GMVESA EF RIC LDF+N + S+KAS VM+ AYRL+V M G
Sbjct: 183 RMLFTYGDTPEGMVESALEFIRICESLDFYNIVISLKASRVPVMLAAYRLMVKRMDELGM 242
Query: 306 DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
DYPLHLGVTEAG+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG
Sbjct: 243 DYPLHLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALG 302
Query: 365 MRAAELQQGVAP 376
+R ++ P
Sbjct: 303 LRKTMVEYVACP 314
>gi|427735481|ref|YP_007055025.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Rivularia
sp. PCC 7116]
gi|427370522|gb|AFY54478.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Rivularia
sp. PCC 7116]
Length = 409
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGDVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L Q ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 ARALSEIKQKLKQTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPDANRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + I + PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTKTEFDEIGDKIADTLKPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDFHN + S+KAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFHNIVISLKASRVPVMLAAYRLMAQRMDAEGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTESPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|212550715|ref|YP_002309032.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
gi|212548953|dbj|BAG83621.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
Length = 591
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 263/472 (55%), Gaps = 41/472 (8%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ V+VGN+ +G E+PIR+Q+MT T D ++++ ++I + G + +R+ + RE
Sbjct: 4 RRKSSAVLVGNIPMGGENPIRIQSMTNTSTLDTEKSIQQCIQIIEAGGEYIRLAARNIRE 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A IKN L+ Y PL+ADIHF +A A+ DK+R+NPGNF + LE
Sbjct: 64 AKNLKNIKNGLIALGYKNPLIADIHFNHKIAETAAKIVDKVRINPGNFVNSTKTLRTLE- 122
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+YQ+ L++I++ F P + CK+ A+RIG N GSLSDRI++ YG+SP+GMVES E
Sbjct: 123 ---KYQQGLRNIKKHFIPFLNICKENNTAIRIGVNQGSLSDRIINRYGNSPQGMVESCME 179
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F RIC +F + + S+K SN +MVQ LL+ M G ++PLHLGVTEAGEGEDGR+
Sbjct: 180 FLRICITENFLDVVISIKTSNIFLMVQTIHLLIKRMNKEGMNFPLHLGVTEAGEGEDGRI 239
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSAIGIGTLL +G+GDTIR+SL+E PE EI L N + E+ +
Sbjct: 240 KSAIGIGTLLTEGIGDTIRISLSENPESEISFAHLLIN--------------YVEEKKSL 285
Query: 385 FDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPF 444
+ ++ LPI+K Y ++ R + SV+ + + P+ +Y + + V +P+
Sbjct: 286 LN-EKIFSPLPIKKRLSNKIY-AIVDRSNTDNFSVNANLM--PDFIY--IGKQTVQNIPY 339
Query: 445 KDLATVD-SILLRELPS------------VDDHDA-RLALKRLVDISMGVITPLSEQLTK 490
+ VD S+ L + + ++ D+ + + R +++ ++ L +L
Sbjct: 340 EIPVIVDFSVFLSQKNTFPLFKFQEKEAWINSKDSLQFIILRYSELTDEILFHLKNKLQT 399
Query: 491 PLPHAMVLVNLQELSTGAYKLLPEG--TRLVVSLRGDESY-EELEILKDIDA 539
+ + N+ E Y L+ +G ++ + DE++ E L++ ID
Sbjct: 400 IIIIYSIQNNIYEQRAFIYALVNKGINNSFILQVSYDENHLESLQVKSSIDC 451
>gi|434398651|ref|YP_007132655.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Stanieria
cyanosphaera PCC 7437]
gi|428269748|gb|AFZ35689.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Stanieria
cyanosphaera PCC 7437]
Length = 406
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 147/300 (49%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVQVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L + +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSMAHAKALAEIKQKLAETYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
++ EYT E+ + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 TGDRTEYTQAEFDEIGAKIRETLEPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF +IC LDF+N + S+KAS VM+ AYRL+V M G +YPLHLGVTEAG
Sbjct: 197 MVESALEFIKICESLDFYNIVISLKASRVPVMLAAYRLMVKRMDELGMEYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|186685139|ref|YP_001868335.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nostoc
punctiforme PCC 73102]
gi|238055491|sp|B2J1G1.1|ISPG_NOSP7 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|186467591|gb|ACC83392.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Nostoc
punctiforme PCC 73102]
Length = 408
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +AL V++ +K+R+NPG + + + E
Sbjct: 85 AKALAEIKQKLIKTYQDVPIVADVHHNGLKIALEVSKHIEKVRINPGLYVFEKPNVNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + I E PLV + G+++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTQSEFDEIGDKIRETLEPLVVSLRDQGKSMRIGVNHGSLAERMLFTYGDTPEGMVESAI 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNLVISMKASRVPVMLAAYRLIAKRMDELGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|427729408|ref|YP_007075645.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Nostoc sp.
PCC 7524]
gi|427365327|gb|AFY48048.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Nostoc sp.
PCC 7524]
Length = 423
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 40 RRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSIAH 99
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 100 AVALAEIKQKLIKTYQDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNANRTE 159
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 160 YTPAEFNEIGEKIRGTLEPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 219
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 220 EFIRICESLDFRNLVISMKASRVPVMVAAYRLMAKRMDELGMDYPLHLGVTEAGDGEYGR 279
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 280 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 333
>gi|443315911|ref|ZP_21045379.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Leptolyngbya sp. PCC 6406]
gi|442784484|gb|ELR94356.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Leptolyngbya sp. PCC 6406]
Length = 407
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VGN+ IG +P+ VQ+M DT D+AG+V + R+ + G ++VR+TV
Sbjct: 23 RRQTRPVPVGNITIGGGNPVVVQSMINEDTLDIAGSVAAIQRLHELGCEIVRVTVPSMAH 82
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A I+ +L +PLVAD+H +AL VA+ DK+R+NPG + + Q + E
Sbjct: 83 AKALATIRQTLEATYRPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPQAGRTE 142
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + Q I + PLV + G+++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 143 YTPTEFDEIGQKIRDTLEPLVVSLRDQGKSMRIGVNHGSLAERMLFTYGDTPEGMVESAL 202
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 203 EFIRICESLDFRNLVISLKASRVPVMVAAYRLMVRRMDELGMDYPLHLGVTEAGDGEYGR 262
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 263 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|427717090|ref|YP_007065084.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Calothrix sp.
PCC 7507]
gi|427349526|gb|AFY32250.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Calothrix sp.
PCC 7507]
Length = 408
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRKTRPVKVGDVTIGGNYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSLAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L+ ++P+VAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 85 AKALAEIKQKLIHTYRDVPIVADVHHNGMKIALEVAKHIEKVRINPGLYVFEKPNTNRSE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YTKAEFDEIGEKICETLAPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC L+F N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFVRICESLNFRNIVISMKASRVPVMVAAYRLIAKRMDELGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|428205658|ref|YP_007090011.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Chroococcidiopsis thermalis PCC 7203]
gi|428007579|gb|AFY86142.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Chroococcidiopsis thermalis PCC 7203]
Length = 408
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/294 (48%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR + VGNV IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 25 RRQTRPIQVGNVTIGGSHPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSMAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L +P+VAD+H +AL VA+ DK+R+NPG + + + + E
Sbjct: 85 AQALAEIKQKLYASYQPVPIVADVHHNGMKIALEVAKHIDKVRINPGLYVFEKPKSNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
Y+ E+++ I + PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 YSQTEFEEIGDKIRQTLEPLVVCLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF N + S+KAS VM+ A RL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 205 EFIRICESLDFRNLVISLKASRVPVMIAANRLMVKRMNELGMDYPLHLGVTEAGDGEYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +G+GDTIRVSLTE PEKEI C L +LG+R ++ P
Sbjct: 265 IKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYVACP 318
>gi|254421770|ref|ZP_05035488.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. PCC 7335]
gi|196189259|gb|EDX84223.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. PCC 7335]
Length = 416
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 203/325 (62%), Gaps = 8/325 (2%)
Query: 54 SSDIAELQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTND 113
SS A+ +P + +P V + +IH RRKTR V VG++ IG HP+ VQ+M D
Sbjct: 5 SSPAAKPKPTTTSAPAEV---AFDTTIH---RRKTRPVKVGDITIGGGHPVVVQSMINED 58
Query: 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-AP 172
T D+ G+V + R+ + G ++VR+TV A A EIK+ L + +PLVAD+H
Sbjct: 59 TLDIEGSVAAIRRLHEVGCEIVRVTVPSMAHARALSEIKDRLAKTYQPVPLVADVHHNGM 118
Query: 173 SVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232
+AL VA+ DK+R+NPG + +A+ ++ EYT E+ + I E PLV + +
Sbjct: 119 KIALEVAKHVDKVRINPGLYVFEKAESDRTEYTQAEFDAIGEKIRETLEPLVISLRDQNK 178
Query: 233 AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQA 292
A+RIG NHGSL++R++ YGD+P GMVESA EF RIC L+F N + S+KAS VM+ A
Sbjct: 179 AMRIGVNHGSLAERMLFTYGDTPEGMVESALEFIRICESLNFRNIVLSLKASRVPVMLAA 238
Query: 293 YRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEK 352
YRL+V M G YPLHLGVTEAG+GE GR+KS GI TLL G+GDTIRVSLTE PEK
Sbjct: 239 YRLMVQRMDELGMSYPLHLGVTEAGDGEYGRIKSTAGIATLLAMGIGDTIRVSLTEAPEK 298
Query: 353 EIDPCRR-LANLGMRAAELQQGVAP 376
EI C L LG+R ++ P
Sbjct: 299 EIPVCYSILQALGLRKTMVEYVACP 323
>gi|72381949|ref|YP_291304.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. NATL2A]
gi|72001799|gb|AAZ57601.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Prochlorococcus marinus str. NATL2A]
Length = 399
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/282 (50%), Positives = 188/282 (66%), Gaps = 4/282 (1%)
Query: 74 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD 133
Q+Y I +RR TR VMVG++ IG ++P+RVQ+M DT D+ G+ + R+ + G +
Sbjct: 8 QRYSTRI---IRRDTRPVMVGDIGIGGDNPVRVQSMINEDTMDIEGSTAAIRRLHEVGCE 64
Query: 134 LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNF 192
+VR+TV A A EIK L +PLVAD+H +AL VA+ DK+R+NPG F
Sbjct: 65 IVRLTVPTLASAKAVGEIKKLLASTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLF 124
Query: 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252
+ + E+T DE + I + F P+V K+ +A+RIG NHGSLS+R++ YG
Sbjct: 125 VFEKPDPNRTEFTKDEIDVIKEKIIQKFKPIVNTLKEQNKALRIGVNHGSLSERMLFAYG 184
Query: 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312
D+P GMVESA EF RIC LDFHN + SMKAS VM+ AYR++ M G++YPLHLG
Sbjct: 185 DTPFGMVESAMEFIRICHSLDFHNIVISMKASRAPVMLAAYRMMADTMDKEGFNYPLHLG 244
Query: 313 VTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
VTEAG+G+ GR+KS +GIGTLL +G+GDTIRVSLTE PEKEI
Sbjct: 245 VTEAGDGDYGRIKSTVGIGTLLSEGIGDTIRVSLTEAPEKEI 286
>gi|212692828|ref|ZP_03300956.1| hypothetical protein BACDOR_02327 [Bacteroides dorei DSM 17855]
gi|212664617|gb|EEB25189.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacteroides
dorei DSM 17855]
Length = 583
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/254 (54%), Positives = 173/254 (68%)
Query: 109 MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168
MT T D VE+ RI D G + VR+T QG REA+ I L + Y+ PLVAD+
Sbjct: 1 MTNTITMDTEACVEQAKRIIDVGGEYVRLTTQGVREAENLKNINIGLRSQGYDTPLVADV 60
Query: 169 HFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK 228
HF P VA A+ +K+R+NPGN+ D F +LEYTD+EY +E++ I F P + CK
Sbjct: 61 HFNPKVADVAAQYAEKVRINPGNYVDPGRTFRKLEYTDEEYAQEIEKIRARFVPFLNICK 120
Query: 229 KYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVV 288
+ A+RIG NHGSLSDRIMS+YGD+P GMVES EF RIC F++ + S+KASN VV
Sbjct: 121 ENHTAIRIGVNHGSLSDRIMSHYGDTPEGMVESCMEFLRICVAEHFNDVVISIKASNTVV 180
Query: 289 MVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTE 348
MV+ RLLV EM +PLHLGVTEAG+GEDGR+KS++GIG LL DGLGDTIRVSL+E
Sbjct: 181 MVRTVRLLVEEMEKENMAFPLHLGVTEAGDGEDGRIKSSLGIGALLADGLGDTIRVSLSE 240
Query: 349 PPEKEIDPCRRLAN 362
PE EI R+L +
Sbjct: 241 APENEIPVARKLVD 254
>gi|298489830|ref|YP_003720007.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase ['Nostoc
azollae' 0708]
gi|298231748|gb|ADI62884.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase ['Nostoc
azollae' 0708]
Length = 407
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 24 RRKTRAVKVGDVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSLGH 83
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L++ ++P+VAD+H +A+ VA+ +K+R+NPG + + + E
Sbjct: 84 AKALAEIKPKLIKTYRDVPIVADVHHNGMKIAMEVAKHIEKVRINPGLYVFEKPNTSRTE 143
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + + I E +PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 144 YTKVEFDEIGEKIRETLAPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 203
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC DF N + SMKAS VMV AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 204 EFIRICESFDFRNIVISMKASRVPVMVAAYRLMAKRMDDLGMDYPLHLGVTEAGDGEYGR 263
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DGLGDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 264 IKSTAGIATLLADGLGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 317
>gi|317970145|ref|ZP_07971535.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CB0205]
Length = 407
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/309 (48%), Positives = 195/309 (63%), Gaps = 4/309 (1%)
Query: 72 PRQKYCESIHKTV--RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
P S + TV RR+TR+V VG++ IGSEHP+ VQ+M DT D+ G + R+ +
Sbjct: 9 PEAGQLSSRYDTVIRRRQTRSVRVGDLWIGSEHPVVVQSMINEDTLDIEGATAGIRRLHE 68
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVN 188
G ++VR+TV A A EI+ L +PLVAD+H +AL VA DK+R+N
Sbjct: 69 AGCEIVRVTVPSLAHAKAMGEIRKRLEDTYQPVPLVADVHHNGMKIALEVANHVDKVRIN 128
Query: 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248
PG F + + E+T +E + I E F PLV K +A+RIG NHGSL++R++
Sbjct: 129 PGLFVFDKPDPNRTEFTPEEIAQIGDRITETFEPLVSLLKAQDKALRIGVNHGSLAERML 188
Query: 249 SYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYP 308
YGD+P GMVESA EF RIC +LDFHN + SMKAS VM+ AYR++ M G++YP
Sbjct: 189 FTYGDTPLGMVESALEFIRICDRLDFHNIVVSMKASRAPVMLAAYRMMADRMDAEGFNYP 248
Query: 309 LHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRA 367
LHLGVTEAG+G+ GR+KS GI TLL DGLGDTIRVSLTE PEKEI C L +LG+R
Sbjct: 249 LHLGVTEAGDGDYGRIKSTAGIATLLADGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRK 308
Query: 368 AELQQGVAP 376
++ P
Sbjct: 309 TMVEYVSCP 317
>gi|425461830|ref|ZP_18841304.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9808]
gi|389825252|emb|CCI25137.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9808]
Length = 406
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEVGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLVHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|428213317|ref|YP_007086461.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Oscillatoria acuminata PCC 6304]
gi|428001698|gb|AFY82541.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Oscillatoria acuminata PCC 6304]
Length = 408
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/300 (49%), Positives = 192/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VGN+ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 22 TIH---RRKTRPVPVGNITIGGGNPVVVQSMINEDTLDIEGSVAGIRRLHEIGCEIVRVT 78
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L + +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 79 VPSMAHAKALAEIKQRLARTYLLVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 138
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ EYT E+ + + I PLV + G+++RIG NHGSL++R++ YGD+P G
Sbjct: 139 NPNRTEYTPTEFAEIGEKIRATLEPLVISLRDQGKSMRIGVNHGSLAERMLFSYGDTPEG 198
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC LDF N + SMKAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 199 MVESALEFIRICESLDFRNLVISMKASRVPVMLAAYRLMVQRMDHLGMDYPLHLGVTEAG 258
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 259 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|428219222|ref|YP_007103687.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudanabaena
sp. PCC 7367]
gi|427991004|gb|AFY71259.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudanabaena
sp. PCC 7367]
Length = 412
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/318 (46%), Positives = 199/318 (62%), Gaps = 10/318 (3%)
Query: 61 QPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
Q A +PL E++ RRKTR V VGNV IG +P+ VQ+M DT D+ G
Sbjct: 13 QSAPAAAPL--------ENLGTIQRRKTRPVKVGNVTIGGGYPVVVQSMINEDTLDIDGA 64
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVA 179
V + R+ + G +++R+TV A A EI+ L + N+PLVAD+H +AL VA
Sbjct: 65 VAGIRRLHEIGCEIMRVTVPSMAHARALAEIRTKLQRTYVNVPLVADVHHNGMKIALEVA 124
Query: 180 ECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239
+ DK+R+NPG + + + ++ EYT E+ + I E PLV K+ G+A+RIG N
Sbjct: 125 KHVDKVRINPGLYVFEKPKDDRTEYTQAEFDEIGDKIRETLKPLVLSLKEQGKAMRIGVN 184
Query: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299
HGSL++R++ YGD+P+GMVESA EF RIC +LDF N + S+KAS VM+ AY+L+
Sbjct: 185 HGSLAERMLFTYGDTPQGMVESALEFIRICEELDFRNLVISLKASRVPVMIAAYQLMARR 244
Query: 300 MYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 359
M G DYPLHLGVTEAG+GE GR+KS GI TLL G+GDTIRVSLTE PEKEI C
Sbjct: 245 MDQLGMDYPLHLGVTEAGDGEYGRIKSTAGIATLLAQGIGDTIRVSLTEAPEKEIPVCYG 304
Query: 360 -LANLGMRAAELQQGVAP 376
L LG+R ++ P
Sbjct: 305 ILQALGLRKTMVEYVACP 322
>gi|425451309|ref|ZP_18831131.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 7941]
gi|440753455|ref|ZP_20932658.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa TAIHU98]
gi|389767458|emb|CCI07148.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 7941]
gi|440177948|gb|ELP57221.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa TAIHU98]
Length = 406
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLSHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|334118766|ref|ZP_08492854.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcoleus
vaginatus FGP-2]
gi|333458996|gb|EGK87611.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcoleus
vaginatus FGP-2]
Length = 406
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 23 RRKTRPVKVGSVTIGGGNPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSMAH 82
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L +PLVAD+H +AL VA+ DK+R+NPG + + + ++ E
Sbjct: 83 AKALAEIKQKLHATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKADRSE 142
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 143 YTDSEFAEIGEKIRETLEPLVISLRDQGKALRIGVNHGSLAERMLFTYGDTPEGMVESAL 202
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 203 EFIKICESLDFRNIVLSLKASRAPVMVAAYRLMVHRMDELGMDYPLHLGVTEAGDGEYGR 262
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS G+ LL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 263 IKSTAGLAPLLTDGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|425471132|ref|ZP_18849992.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9701]
gi|389883027|emb|CCI36555.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9701]
Length = 406
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLSHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVISLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|428315815|ref|YP_007113697.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Oscillatoria
nigro-viridis PCC 7112]
gi|428239495|gb|AFZ05281.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Oscillatoria
nigro-viridis PCC 7112]
Length = 406
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 23 RRKTRPVKVGSVTIGGGNPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVTVPSMAH 82
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK L +PLVAD+H +AL VA+ DK+R+NPG + + + ++ E
Sbjct: 83 AKALAEIKQKLHATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPKADRTE 142
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YTD E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 143 YTDAEFAEIGEKIRETLEPLVISLRDQGKALRIGVNHGSLAERMLFTYGDTPEGMVESAL 202
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF +IC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 203 EFIKICESLDFRNIVLSLKASRAPVMVAAYRLMVHRMDELGMDYPLHLGVTEAGDGEYGR 262
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS G+ LL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 263 IKSTAGLAPLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|427417323|ref|ZP_18907506.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Leptolyngbya sp. PCC 7375]
gi|425760036|gb|EKV00889.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Leptolyngbya sp. PCC 7375]
Length = 408
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/297 (48%), Positives = 188/297 (63%), Gaps = 2/297 (0%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
K +RRKTR V VGNV IG P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 20 KIIRRKTRPVPVGNVIIGGGAPVVVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPS 79
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFE 200
A A IK L +PLVAD+H +AL VA+ DK+R+NPG + + +
Sbjct: 80 MAHAKALATIKEKLAATYQTVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPSDD 139
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVE 260
+ EYT E+ + I E PLV + +++RIG NHGSL++R++ YGD+P GMVE
Sbjct: 140 RTEYTQAEFDAIGEKIRETLEPLVIALRDQNKSMRIGVNHGSLAERMLFTYGDTPEGMVE 199
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA EF RIC L+FHN + S+KAS VM+ AYRL+ M G DYPLHLGVTEAG+GE
Sbjct: 200 SALEFIRICESLNFHNLVISLKASRVPVMLAAYRLMAQRMDQLGMDYPLHLGVTEAGDGE 259
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 260 YGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|158333377|ref|YP_001514549.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acaryochloris
marina MBIC11017]
gi|229485800|sp|B0C6E1.1|ISPG_ACAM1 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|158303618|gb|ABW25235.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acaryochloris
marina MBIC11017]
Length = 408
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 24 RRKTRPVPVGDVIIGGGHPVVVQSMINEDTLDIEGSVAAIRRLHELGCEIVRVTVPSMAH 83
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A IK L +PLVAD+H +AL VA+ DK+R+NPG + +A+ ++ E
Sbjct: 84 AKALATIKEKLTATYQTVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKAKDDRTE 143
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
++ E++ I E PLV + +A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 144 FSQSEFENIGDKIRETLEPLVVSLRDQNKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 203
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC+ LDF+N + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG+GE GR
Sbjct: 204 EFIRICQSLDFNNLVISMKASRVPVMLAAYRLMARRMDELGMDYPLHLGVTEAGDGEYGR 263
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL DG+GDT+RVSLTE PEKEI C L LG+R ++ P
Sbjct: 264 IKSTAGIATLLADGIGDTLRVSLTESPEKEIPVCYSILQALGLRKTMVEYVACP 317
>gi|359460349|ref|ZP_09248912.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acaryochloris
sp. CCMEE 5410]
Length = 408
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/295 (48%), Positives = 189/295 (64%), Gaps = 2/295 (0%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 23 IRRKTRPVPVGDVIIGGGHPVVVQSMINEDTLDIDGSVAAIRRLHELGCEIVRVTVPSMA 82
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQL 202
A A IK L +PLVAD+H +AL VA+ DK+R+NPG + +A+ ++
Sbjct: 83 HAKALATIKEKLTTTYQKVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKAKDDRT 142
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
E++ E+ I E PLV + +A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 143 EFSQSEFDDIGDKIRETLEPLVVSLRDQNKAMRIGVNHGSLAERMLFTYGDTPEGMVESA 202
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
EF RIC+ LDF+N + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG+GE G
Sbjct: 203 LEFIRICQSLDFNNLVISMKASRVPVMLAAYRLMAKRMDELGMDYPLHLGVTEAGDGEYG 262
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
R+KS GI TLL DG+GDT+RVSLTE PEKEI C L LG+R ++ P
Sbjct: 263 RIKSTAGIATLLADGIGDTLRVSLTESPEKEIPVCYSILQALGLRKTMVEYVACP 317
>gi|119510040|ref|ZP_01629181.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nodularia
spumigena CCY9414]
gi|119465364|gb|EAW46260.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nodularia
spumigena CCY9414]
Length = 408
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 142/297 (47%), Positives = 189/297 (63%), Gaps = 2/297 (0%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
K RRKTR V VGNV IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 22 KIKRRKTRPVKVGNVTIGGNYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPS 81
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFE 200
A EIK L++ ++P+VAD+H +AL VA+ +K+R+NPG + +
Sbjct: 82 MAHAKVMAEIKQRLIKTYQDVPIVADVHHNGMRIALEVAKHIEKVRINPGLYVFEKPNSN 141
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVE 260
+ EYT E+ + I E PLV + G+A+RIG NHGSL++R++ YGD+P GMVE
Sbjct: 142 RSEYTKTEFDEIGDKIRETLEPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEGMVE 201
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA EF RIC L+F N + SMKAS VM+ AYR++ + G DYPLHLGVTEAG+GE
Sbjct: 202 SALEFIRICESLNFRNLVISMKASRVPVMIAAYRMMAKRLDELGMDYPLHLGVTEAGDGE 261
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 262 YGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 318
>gi|126656414|ref|ZP_01727675.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. CCY0110]
gi|126622100|gb|EAZ92807.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. CCY0110]
Length = 404
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 197/312 (63%), Gaps = 5/312 (1%)
Query: 67 SPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMR 126
+P + ++ +IH RRKTR V VG++ IG P+ VQ+M DT D+ G+V + R
Sbjct: 6 TPQTNSKPEFDTTIH---RRKTRPVKVGDITIGGGFPVVVQSMINEDTLDIEGSVSAIRR 62
Query: 127 IADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKI 185
+ + G ++VR+TV A A IK L Q +PLVAD+H +AL VA+ DK+
Sbjct: 63 LHEMGCEIVRVTVPSMAHAKALATIKEKLAQVYQPVPLVADVHHNGLKIALEVAKHVDKV 122
Query: 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245
R+NPG + + + EYT E+++ + I + PLV + G+A+RIG NHGSL++
Sbjct: 123 RINPGLYVFEKPSPTRSEYTQAEFEEIGEKIRQTLEPLVISLRDQGKAMRIGVNHGSLAE 182
Query: 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW 305
R++ YGD+P GMVESA EF RIC LDF+N + S+KAS VM+ AYRL+V M
Sbjct: 183 RMLFTYGDTPEGMVESALEFIRICESLDFYNIVISLKASRVPVMLAAYRLMVKRMDELAM 242
Query: 306 DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
DYPLHLGVTEAG+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG
Sbjct: 243 DYPLHLGVTEAGDGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALG 302
Query: 365 MRAAELQQGVAP 376
+R ++ P
Sbjct: 303 LRKTMVEYVACP 314
>gi|307151431|ref|YP_003886815.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. PCC 7822]
gi|306981659|gb|ADN13540.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. PCC 7822]
Length = 406
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 196/300 (65%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVKVGDVTIGGGYPVVVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +IK L + +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSMAHAVALAKIKEQLAKTYKPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT E+ + + I E PLV K+ +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KDDRSEYTQAEFNEIGEKIRETLKPLVLTLKEQDKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC L+F+N + S+KAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVESALEFIRICESLEFYNIVISLKASRVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|425436437|ref|ZP_18816873.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9432]
gi|389678876|emb|CCH92329.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9432]
Length = 406
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLSHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + +A+RIG NHGSLS+R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVVSLRDQDKAMRIGVNHGSLSERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|218247583|ref|YP_002372954.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. PCC 8801]
gi|257061083|ref|YP_003138971.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. PCC 8802]
gi|226722783|sp|B7K5R5.1|ISPG_CYAP8 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|218168061|gb|ACK66798.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. PCC 8801]
gi|256591249|gb|ACV02136.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. PCC 8802]
Length = 406
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 147/319 (46%), Positives = 197/319 (61%), Gaps = 5/319 (1%)
Query: 60 LQPASEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAG 119
+Q PL ++ +IH RR+TR V VG++ IG +P+ VQ+M DT D+ G
Sbjct: 1 MQTLETPKPLTNTSPEFDTTIH---RRQTRPVKVGDITIGGGYPVVVQSMINEDTLDIEG 57
Query: 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRV 178
+V + R+ + G ++VR+TV A A EI L + +PLVAD+H +AL V
Sbjct: 58 SVAGIRRLHEIGCEIVRVTVPSMAHAKALAEINQKLAEVYRRVPLVADVHHNGLKIALEV 117
Query: 179 AECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238
A+ DK+R+NPG + + + EYT E+ + + I E PLV + G+A+RIG
Sbjct: 118 AKHVDKVRINPGLYVFEKPSTTRSEYTQAEFDEIGEKISETLKPLVVSLRDQGKAMRIGV 177
Query: 239 NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVA 298
NHGSL++R++ YGD+P GMVESA EF RIC LDF N + S+KAS VM+ AYRL+V
Sbjct: 178 NHGSLAERMLFTYGDTPEGMVESALEFIRICESLDFRNLVISLKASRVPVMLAAYRLMVK 237
Query: 299 EMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCR 358
M G DYPLHLGVTEAG+GE GR+KS GI TLL +G+GDTIRVSLTE PEKEI C
Sbjct: 238 RMDELGMDYPLHLGVTEAGDGEYGRIKSTAGIATLLAEGIGDTIRVSLTEAPEKEIPVCY 297
Query: 359 R-LANLGMRAAELQQGVAP 376
L LG+R ++ P
Sbjct: 298 SILQALGLRKTMVEYVACP 316
>gi|443648674|ref|ZP_21130062.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa DIANCHI905]
gi|159029945|emb|CAO90324.1| ispG [Microcystis aeruginosa PCC 7806]
gi|443335128|gb|ELS49608.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa DIANCHI905]
Length = 406
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVIIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEVGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLVHATALAKIREKLLTTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV YRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVISLKASRVPVMVATYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|422303390|ref|ZP_16390741.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9806]
gi|389791661|emb|CCI12560.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9806]
Length = 406
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 194/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEVGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLAHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVVSLRDQGKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|443325072|ref|ZP_21053785.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Xenococcus
sp. PCC 7305]
gi|442795328|gb|ELS04702.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Xenococcus
sp. PCC 7305]
Length = 406
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/312 (46%), Positives = 195/312 (62%), Gaps = 5/312 (1%)
Query: 67 SPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMR 126
+P + ++ +IH RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R
Sbjct: 6 NPNVTVTSEFDTTIH---RRKTRPVKVGDVTIGGGYPVVVQSMINEDTLDIDGSVAGIRR 62
Query: 127 IADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKI 185
+ + G ++VR+TV A A EIK L Q N+PLVAD+H +AL VA+ DK+
Sbjct: 63 LHEIGCEIVRVTVPSMAHAKALAEIKEKLQQTYQNVPLVADVHHNGMKIALEVAKHVDKV 122
Query: 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245
R+NPG + + + ++ EY E++ I PLV + G+A+RIG NHGSL++
Sbjct: 123 RINPGLYVFEKPKSDRTEYNQAEFEDIGSKIRATLEPLVISLRDQGKAMRIGVNHGSLAE 182
Query: 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW 305
R++ YGD+P GMVESA EF IC LDF N + S+KAS VM+ AY+L+V M
Sbjct: 183 RMLFTYGDTPEGMVESALEFIHICESLDFRNLVISLKASRVPVMIAAYKLMVQRMNELSM 242
Query: 306 DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
DYPLHLGVTEAG+GE GR+KS GIGTLL G+GDTIRVSLTE PEKEI C L LG
Sbjct: 243 DYPLHLGVTEAGDGEYGRIKSTAGIGTLLAAGIGDTIRVSLTEAPEKEIPVCYSILQALG 302
Query: 365 MRAAELQQGVAP 376
+R ++ P
Sbjct: 303 LRKTMVEYVACP 314
>gi|166365559|ref|YP_001657832.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa NIES-843]
gi|425467392|ref|ZP_18846675.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9809]
gi|189045790|sp|B0JJJ8.1|ISPG_MICAN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|166087932|dbj|BAG02640.1| GcpE protein homolog [Microcystis aeruginosa NIES-843]
gi|389829852|emb|CCI28492.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9809]
Length = 406
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVQVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLVHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVVSLRDQDKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|425446591|ref|ZP_18826594.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9443]
gi|389733115|emb|CCI03078.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9443]
Length = 406
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLAHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVISLRDQDKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVQVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|318041680|ref|ZP_07973636.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. CB0101]
Length = 408
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 190/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR+V VG++ +GS+HP+ VQ+M DT D+ G + R+ + G ++VR+TV
Sbjct: 25 RRKTRSVRVGDLWMGSDHPVVVQSMINEDTLDIEGATAGIRRLHEAGCEIVRVTVPSLAH 84
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EI+ L +PLVAD+H +AL VA+ DK+R+NPG F + + E
Sbjct: 85 AKAMGEIRQRLESAYKPVPLVADVHHNGMKIALEVAQHVDKVRINPGLFVFDKPDPNRTE 144
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
++D E I E F PLV+ K+ +A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 145 FSDAEIAAIGDRITETFEPLVKLLKEQDKALRIGVNHGSLAERMLFRYGDTPLGMVESAL 204
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC +LDFHN + SMKAS VM+ AYR++ M G+ YPLHLGVTEAG+G+ GR
Sbjct: 205 EFIRICDRLDFHNIVISMKASRAPVMLAAYRMMADRMDAEGFHYPLHLGVTEAGDGDYGR 264
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL +GLGDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 265 IKSTAGIATLLSEGLGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVSCP 318
>gi|390437784|ref|ZP_10226303.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
sp. T1-4]
gi|389838824|emb|CCI30427.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
sp. T1-4]
Length = 406
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLAHATALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVISLRDQDKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|16330309|ref|NP_441037.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803]
gi|383322050|ref|YP_005382903.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|383325219|ref|YP_005386072.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|383491103|ref|YP_005408779.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|384436370|ref|YP_005651094.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803]
gi|451814467|ref|YP_007450919.1| GcpE protein [Synechocystis sp. PCC 6803]
gi|8928139|sp|P73672.1|ISPG_SYNY3 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|1652798|dbj|BAA17717.1| GcpE protein [Synechocystis sp. PCC 6803]
gi|339273402|dbj|BAK49889.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803]
gi|359271369|dbj|BAL28888.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|359274539|dbj|BAL32057.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|359277709|dbj|BAL35226.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|451780436|gb|AGF51405.1| GcpE protein [Synechocystis sp. PCC 6803]
Length = 403
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 191/300 (63%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG V +G HP+ VQ+M DT DV G+V + R+ + G ++VR+T
Sbjct: 17 TIH---RRKTRPVPVGAVTVGGGHPVVVQSMINEDTLDVDGSVAGIRRLHEIGCEIVRVT 73
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +IK L +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 74 VPSMAHAKALADIKQKLQATYQAVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 133
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
++ Y+D E+ + + I E PLV + G+++RIG NHGSLS+R++ YGD+P G
Sbjct: 134 DAQREGYSDQEFAEIGEKIRETLEPLVISLRDQGKSMRIGVNHGSLSERMLFTYGDTPEG 193
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF +IC LDF N + SMKAS VM+ AYRL+V M G DYPLHLGVTEAG
Sbjct: 194 MVQSALEFIKICESLDFRNLVVSMKASRVPVMLAAYRLMVKRMDELGMDYPLHLGVTEAG 253
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 254 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 313
>gi|425457671|ref|ZP_18837369.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9807]
gi|389800907|emb|CCI19854.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9807]
Length = 406
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGHPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLAHAAALAKIREKLLATYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVISLRDQDKAMRIGVNHGSLAERMLFSYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|428223580|ref|YP_007107677.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geitlerinema
sp. PCC 7407]
gi|427983481|gb|AFY64625.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geitlerinema
sp. PCC 7407]
Length = 407
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 188/300 (62%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG HP+ VQ+M DT DV G+V + R+ + G ++VR+T
Sbjct: 21 TIH---RRKTRPVPVGSVTIGGGHPVAVQSMINEDTLDVDGSVAAIRRLHEAGCEIVRVT 77
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A IK L +PLVAD+H +AL VA+ DK+R+NPG +
Sbjct: 78 VPSMAHAKALAVIKQKLADTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFENR 137
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ YT E+++ Q I E PLV + G+++RIG NHGSL++R++ YGD+P G
Sbjct: 138 KSGSGAYTQAEFEEIGQKIRETLEPLVVSLRDQGKSMRIGVNHGSLAERMLFTYGDTPEG 197
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC LD+ N + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG
Sbjct: 198 MVESALEFIRICESLDYRNLVISMKASRVPVMLAAYRLMAKRMDELGMDYPLHLGVTEAG 257
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 258 DGEYGRIKSTAGIATLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 317
>gi|443312891|ref|ZP_21042505.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechocystis sp. PCC 7509]
gi|442777041|gb|ELR87320.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechocystis sp. PCC 7509]
Length = 397
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 144/300 (48%), Positives = 192/300 (64%), Gaps = 7/300 (2%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR+V VGN+ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 13 TIH---RRKTRSVKVGNIIIGGGYPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVT 69
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L ++PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 70 VPSMAHAKALAEIKQKLALTYQSVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 129
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ +YT ++ + + I E +PLV + G+A+RIG NHGSL++R++ YGD+P G
Sbjct: 130 KTS--DYTQADFDEIGEKIRETLAPLVVSLRDRGKAMRIGVNHGSLAERMLFTYGDTPEG 187
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF RIC LDF N + S+KAS VMV AYRL+ M G DYPLHLGVTEAG
Sbjct: 188 MVESALEFIRICESLDFGNIVISLKASRVPVMVAAYRLMAQRMDALGMDYPLHLGVTEAG 247
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI LL DG+GDTIRVS+TE PEKEI C L LG+R ++ P
Sbjct: 248 DGEYGRIKSTAGIAPLLADGIGDTIRVSITEAPEKEISVCYSILQALGLRKTMVEYVACP 307
>gi|434387661|ref|YP_007098272.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chamaesiphon minutus PCC 6605]
gi|428018651|gb|AFY94745.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Chamaesiphon minutus PCC 6605]
Length = 406
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 142/300 (47%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V +G+V IG +P+ VQ+M DT D+ G V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVAIGSVIIGGNNPVVVQSMINEDTLDIDGAVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A EIK L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSMAHARALAEIKQKLIDTYQIVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EYT E+ + + I ++ PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KPDRTEYTPTEFAEIGEQIRDMLEPLVVSLRNQNKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA E RIC+ DFHN + SMKAS VM+ AYRLL M G DYP+HLGVTEAG
Sbjct: 197 MVESALECIRICQSFDFHNLVVSMKASRVPVMLAAYRLLAQRMDKAGMDYPIHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL +G+GDT+RVSLTE PEKEI C L +LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLAEGIGDTLRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYVACP 316
>gi|56750826|ref|YP_171527.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
elongatus PCC 6301]
gi|81299524|ref|YP_399732.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
elongatus PCC 7942]
gi|73621106|sp|Q5N3W3.1|ISPG_SYNP6 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|123557259|sp|Q31QC4.1|ISPG_SYNE7 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|56685785|dbj|BAD79007.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81168405|gb|ABB56745.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
elongatus PCC 7942]
Length = 407
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 192/294 (65%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR+V VG++ IGS HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 20 RRPTRSVRVGDIWIGSRHPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSLGH 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A +IK L ++PLVAD+H +AL VA+ DK+R+NPG + + +
Sbjct: 80 AKAVGDIKKKLQDTYRDVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPDPNRQG 139
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT +E+++ + I + PLV ++ +A+RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 140 YTPEEFERIGKQIRDTLEPLVTSLREQDKAMRIGVNHGSLAERMLFTYGDTPEGMVESAL 199
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF R+C ++DF N + SMKAS VM+ AYRL+ M G DYPLHLGVTEAG+G+ GR
Sbjct: 200 EFLRLCEEMDFRNLVISMKASRAPVMMAAYRLMAKRMDDLGMDYPLHLGVTEAGDGDYGR 259
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS +GIGTLL +G+GDTIRVSLTE PE EI C L LG+R ++ P
Sbjct: 260 IKSTVGIGTLLAEGIGDTIRVSLTEAPENEIPVCYSILQALGLRKTMVEYVACP 313
>gi|425443332|ref|ZP_18823552.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9717]
gi|389715394|emb|CCI00228.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Microcystis
aeruginosa PCC 9717]
Length = 406
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/300 (48%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR V VG+V IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRPVRVGSVTIGGGYPVVVQSMINEDTLDIDGSVAGIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A A +I+ L+ +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSLVHATALAKIREKLLTTYQPVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ ++ EY+ E+ + + I E PLV + +A+RIG NHGSL++R++ YGD+P G
Sbjct: 137 KADRSEYSQAEFDEIGEKIAETLKPLVISLRDQDKAMRIGVNHGSLAERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MV+SA EF RIC LDF N + S+KAS VMV AYRL+V M G DYPLHLGVTEAG
Sbjct: 197 MVQSALEFIRICESLDFRNLVVSLKASRVPVMVAAYRLMVKRMDELGMDYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+GE GR+KS GI TLL DG+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGEYGRIKSTAGIATLLADGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|113477916|ref|YP_723977.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Trichodesmium
erythraeum IMS101]
gi|122964399|sp|Q10W70.1|ISPG_TRIEI RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|110168964|gb|ABG53504.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Trichodesmium
erythraeum IMS101]
Length = 406
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/300 (47%), Positives = 193/300 (64%), Gaps = 5/300 (1%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
+IH RRKTR+V VG++ IG HP+ VQ+M DT D+ +V + R+ + G ++VR+T
Sbjct: 20 TIH---RRKTRSVKVGDITIGGGHPVVVQSMINEDTLDIERSVAAIRRLHEIGCEIVRVT 76
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
V A + EIK L + +PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 77 VPSIAHAKSLGEIKQKLAETYKPVPLVADVHHNGMKIALEVAKQVDKVRINPGLYVFEKP 136
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
Q E+ EYT E+++ I + PLV + +A+RIG NHGSLS+R++ YGD+P G
Sbjct: 137 QAERNEYTQAEFEEIGDKIRQTLKPLVVSLRDQNKAMRIGVNHGSLSERMLFTYGDTPEG 196
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA EF +IC L ++N + S+KAS VM+ AYRL+V M G YPLHLGVTEAG
Sbjct: 197 MVESALEFIKICESLKYYNLVISLKASRVPVMLAAYRLMVKRMDELGMPYPLHLGVTEAG 256
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+G+ GR+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 257 DGDYGRVKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 316
>gi|209402477|gb|ACI45961.1| putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase precursor [Pyropia yezoensis]
Length = 484
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 186/280 (66%), Gaps = 1/280 (0%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
S +RRKTR V VG+++IG +P+ VQ+M DT DV + + + G ++VR+T
Sbjct: 83 STGAVIRRKTRAVRVGDISIGGGNPVVVQSMINEDTLDVDNATASIRALHEIGCEMVRVT 142
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197
A A IK L + ++PLVAD+H +AL VA+ DK+R+NPG + +
Sbjct: 143 CVSMAHAHAVGFIKEKLRAEYQDVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKP 202
Query: 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRG 257
+ + EY+D+E+ + ++ +PLV K+ G+A+RIG NHGSL++R+M YGD+PRG
Sbjct: 203 KEGRTEYSDEEFNRLKDKLKATLTPLVLSLKEQGKAMRIGVNHGSLAERMMFTYGDTPRG 262
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESA E ICR+LDFHN + SMKAS VM+ AYR L + G+DYP+HLGVTEAG
Sbjct: 263 MVESAMECIEICRELDFHNLVISMKASKVPVMIAAYRQLALRLDAEGYDYPIHLGVTEAG 322
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
+GE GR+KS+IGIGTLL +G+GDT+RVSLTE P KEI C
Sbjct: 323 DGEYGRVKSSIGIGTLLGEGIGDTLRVSLTENPMKEIPVC 362
>gi|87302162|ref|ZP_01084987.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 5701]
gi|87283087|gb|EAQ75043.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Synechococcus
sp. WH 5701]
Length = 414
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 143/304 (47%), Positives = 192/304 (63%), Gaps = 5/304 (1%)
Query: 75 KYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL 134
+Y IH RRKTR+V VG+V +GSEHP+ VQ+M DT D+ G + R+ + G ++
Sbjct: 24 RYDTLIH---RRKTRSVRVGDVWVGSEHPVVVQSMINEDTLDIEGATAGIRRLHEAGCEI 80
Query: 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFA 193
VR+TV A A EI+ L +PLVAD+H +AL VA+ DK+R+NPG +
Sbjct: 81 VRLTVPSLAHAKAVGEIRKRLEDSYQPVPLVADVHHNGMKIALEVAQHVDKVRINPGLYV 140
Query: 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253
+ + E+T +E + I+ PLV ++ +A+RIG NHGSL++R++ YGD
Sbjct: 141 FDKPDPNRTEFTPEEVEAIGARIQATLEPLVSLLREQDKALRIGVNHGSLAERMLFTYGD 200
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P GMVESA EF IC +LDFHN + SMKAS VM+ AYR++ M G+ YPLHLGV
Sbjct: 201 TPLGMVESAMEFIHICDRLDFHNIVVSMKASRAPVMLAAYRMMADRMDAGGFHYPLHLGV 260
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQ 372
TEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C L LG+R ++
Sbjct: 261 TEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEY 320
Query: 373 GVAP 376
P
Sbjct: 321 VACP 324
>gi|411119074|ref|ZP_11391454.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Oscillatoriales cyanobacterium JSC-12]
gi|410710937|gb|EKQ68444.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Oscillatoriales cyanobacterium JSC-12]
Length = 411
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG++ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 28 RRKTRPVPVGSITIGGGYPVAVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPSMAH 87
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EI++ + Q +PLVAD+H +AL A+ D +R+NPG + + + ++ E
Sbjct: 88 AKAMEEIRHKINQSYKPVPLVADVHHNGLKIALEAAKHVDNVRINPGLYVFEKPKSDRTE 147
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+ + I E PLV K+ +++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 148 YTQAEFDDIGEKIRETLEPLVLTLKEQDKSMRIGVNHGSLAERMLFTYGDTPEGMVESAL 207
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC LDF+N S+KAS VM+ A RL+V M G DYPLHLGVTEAG+GE GR
Sbjct: 208 EFIRICESLDFYNLEISLKASKVPVMIAANRLMVERMDALGMDYPLHLGVTEAGDGEYGR 267
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 268 IKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYGILQALGLRRTMVEYVACP 321
>gi|22298539|ref|NP_681786.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Thermosynechococcus elongatus BP-1]
gi|32129680|sp|Q8DK70.1|ISPG_THEEB RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|22294719|dbj|BAC08548.1| tlr0996 [Thermosynechococcus elongatus BP-1]
Length = 402
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 141/295 (47%), Positives = 189/295 (64%), Gaps = 2/295 (0%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRKTR V +G+V IG HP+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 18 VRRKTRPVPIGSVVIGGGHPVAVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPSLA 77
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQL 202
A A EI++ L + +PLVAD+H +AL VA+ D +R+NPG + + + +
Sbjct: 78 HAKAMEEIRDRLYKTYKPVPLVADVHHNGMKIALEVAKYVDNVRINPGLYVFEKPKPNRT 137
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
EYT E+ + I E PLV + G+++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 138 EYTQAEFDEIGAKIRETLEPLVISLRDQGKSMRIGVNHGSLAERMLFTYGDTPEGMVESA 197
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
EF RIC L+F+N S+KAS VM+ A RL+V M G DYPLHLGVTEAG+GE G
Sbjct: 198 LEFIRICESLNFYNLEISLKASRVPVMIAANRLMVKRMDELGMDYPLHLGVTEAGDGEYG 257
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
R+KS GI TLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 258 RIKSTAGIATLLAEGIGDTIRVSLTEAPEKEIPVCYGILQALGLRRTMVEYVACP 312
>gi|194477281|ref|YP_002049460.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paulinella
chromatophora]
gi|171192288|gb|ACB43250.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paulinella
chromatophora]
Length = 415
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/294 (48%), Positives = 188/294 (63%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TRTVMVG V IGSEHP+ VQ+M DT D+ V + ++D G ++VR+T
Sbjct: 31 RRPTRTVMVGRVPIGSEHPVVVQSMINEDTLDIDKAVISIRSLSDAGCEIVRLTTPSIAH 90
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EI+ L ++ +PLVAD+H +AL DKIR+NPG F +A +
Sbjct: 91 AKAVGEIRRRLREQKCYVPLVADVHHNGIKIALEALNHVDKIRINPGLFIFDKADSNRDG 150
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
++ +EYQ + I F PLV+ K+ +A+RIG NHGSL++R++ +GD+P+GMVESA
Sbjct: 151 FSAEEYQAIGERIRLSFEPLVQSLKEKNKALRIGVNHGSLAERMLFIHGDTPKGMVESAM 210
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF RIC +LDFHN + SMKAS +M+ AYRL+ M G+ YPLHLGVTEAG+G+ GR
Sbjct: 211 EFIRICHRLDFHNIVVSMKASRTAIMLAAYRLMAQTMDNEGFRYPLHLGVTEAGDGDYGR 270
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI LL DGLGDTIRVSLTE PE EI L +LG+R ++ P
Sbjct: 271 IKSTAGIAPLLCDGLGDTIRVSLTEAPENEIPVGYSILQSLGLRKTMVEYVACP 324
>gi|254432225|ref|ZP_05045928.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanobium sp.
PCC 7001]
gi|197626678|gb|EDY39237.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanobium sp.
PCC 7001]
Length = 417
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/318 (45%), Positives = 196/318 (61%), Gaps = 4/318 (1%)
Query: 63 ASEGSPLLVPRQKYCESIHKTV--RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGT 120
++ SP +P + TV RRKTR+V VG+V +GS+HP+ VQ+M DT DV G
Sbjct: 10 SAASSPAGLPADWASNPRYDTVIRRRKTRSVRVGDVWVGSDHPVVVQSMINEDTLDVEGA 69
Query: 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVA 179
+ R+ + G ++VR+TV A A EI+ L +PLVAD+H +AL VA
Sbjct: 70 TAGIRRLHEAGCEIVRLTVPSLAHAKAVGEIRRRLEDTYRPVPLVADVHHNGMKIALEVA 129
Query: 180 ECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239
+ DK+R+NPG + + + E+T +E + I+ PLV K+ + +RIG N
Sbjct: 130 QHVDKVRINPGLYVFDKPDPNRTEFTAEEVAAIGERIQTTLEPLVSLLKEQDKGLRIGVN 189
Query: 240 HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299
HGSL++R++ YGD+P GMVESA EF IC +LDFHN + SMKAS VM+ AYR++
Sbjct: 190 HGSLAERMLFTYGDTPLGMVESAMEFIHICDRLDFHNIVVSMKASRAPVMLAAYRMMADR 249
Query: 300 MYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR 359
M G+ YPLHLGVTEAG+G+ GR+KS GI TLL +GLGDTIRVSLTE PEKEI C
Sbjct: 250 MDADGFPYPLHLGVTEAGDGDYGRIKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYS 309
Query: 360 -LANLGMRAAELQQGVAP 376
L LG+R ++ P
Sbjct: 310 ILQALGLRKTMVEYVACP 327
>gi|449017461|dbj|BAM80863.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Cyanidioschyzon merolae strain 10D]
Length = 507
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 191/294 (64%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG +P+ VQ+M DT D+ G V + R+ + G ++VR+TV
Sbjct: 94 RRKTRAVRVGDVYIGGGNPVVVQSMINEDTLDIEGCVASIRRLHEAGCEVVRLTVPSMAH 153
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A IK L + ++PLVAD+H ++AL VA+ DK+R+NPG + + + E
Sbjct: 154 AHAVGFIKQRLRETYRDVPLVADVHHNGMNIALEVAKHVDKVRINPGLYVFEKPDPNRTE 213
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
Y+ +++ Q ++E PL+ ++ +A+RIG NHGSLS+R++ YGD+P GMVESA
Sbjct: 214 YSRADFEAAAQKLKETLKPLILSLREQDKAMRIGVNHGSLSERMLFTYGDTPEGMVESAL 273
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
E R+CR+LDFHN + SMKAS VM+ AYRLL + DYP+HLGVTEAG+GE GR
Sbjct: 274 ECIRVCRELDFHNLVISMKASKVPVMMAAYRLLAKRLDQESMDYPIHLGVTEAGDGEYGR 333
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS+IGIG LL +G+GDTIRVSLTE P KEI C L LG+R ++ P
Sbjct: 334 IKSSIGIGGLLAEGIGDTIRVSLTEDPVKEIPVCYGILQALGLRRTMVEYVACP 387
>gi|402846789|ref|ZP_10895098.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
sp. oral taxon 279 str. F0450]
gi|402267481|gb|EJU16876.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
sp. oral taxon 279 str. F0450]
Length = 598
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 179/279 (64%), Gaps = 4/279 (1%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+ V +G+ +G ++P+RVQ+M T T D V + RI GA+ +R T Q KR
Sbjct: 19 RRRAALVHIGDTPLGGDYPVRVQSMATASTLDTEAAVAQAERIISAGAEYLRYTAQDKRV 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I L + PLVADIHF P+ A E +K+RVNPGN+ D + E+
Sbjct: 79 ATNLGVIHKELRARGITTPLVADIHFNPTAADTALEYVEKVRVNPGNYVDSKGT---TEW 135
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
D+ Y+ + + E F VE+ K RA+RIG NHGSLS+R++ YGD+P GMV+S E
Sbjct: 136 NDEVYRAMHEKVRERFGAFVERAKTLKRAIRIGVNHGSLSERMVMLYGDTPEGMVQSCLE 195
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLGVTEAGEGEDGR 323
+ +CR+ DFH+ + SMK+SN VVM A RLLVA + G+ YPLHLGVTEAGEGEDGR
Sbjct: 196 YLDVCREHDFHDIVISMKSSNTVVMTAAVRLLVARLDELGYPAYPLHLGVTEAGEGEDGR 255
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362
+KSA+GIG+LL DG+GDTIRVSL+E PE EI R L +
Sbjct: 256 IKSAVGIGSLLADGIGDTIRVSLSEEPECEIPVARALVD 294
>gi|427701994|ref|YP_007045216.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanobium
gracile PCC 6307]
gi|427345162|gb|AFY27875.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanobium
gracile PCC 6307]
Length = 417
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 186/294 (63%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR+V VG+V +GSEHP+ VQ+M DT D+ G + R+ + G ++VR+TV
Sbjct: 34 RRKTRSVRVGDVWVGSEHPVVVQSMINEDTLDIEGATAGIRRLHEAGCEIVRLTVPSLAH 93
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A EI+ L +PLVAD+H +AL VA+ DK+R+NPG + + + E
Sbjct: 94 AKAVKEIRQRLEDTYQPVPLVADVHHNGMKIALEVAQHVDKVRINPGLYVFDKPDPNRTE 153
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
+T +E + I+ PLV K + +RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 154 FTPEELAAIGERIQATLEPLVSLLKDQDKGLRIGVNHGSLAERMLFTYGDTPLGMVESAM 213
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
EF IC +LDFHN + SMKAS VM+ AYR++ M G+ YPLHLGVTEAG+G+ GR
Sbjct: 214 EFIHICDRLDFHNIVVSMKASRAPVMLAAYRMMAFRMDAEGFHYPLHLGVTEAGDGDYGR 273
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS GI TLL +GLGDTIRVSLTE PEKEI C L +G+R ++ P
Sbjct: 274 IKSTAGIATLLAEGLGDTIRVSLTEAPEKEIPVCYAILQAMGLRKTMVEYVACP 327
>gi|188994862|ref|YP_001929114.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis ATCC 33277]
gi|188594542|dbj|BAG33517.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis ATCC 33277]
Length = 581
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 179/276 (64%), Gaps = 2/276 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT +G+ +G + PIR+Q+M T D +V++ RI D GAD VR T QG RE
Sbjct: 9 RRKTSVAQIGDTPLGGDFPIRIQSMANVSTMDTQASVDQAARIIDAGADYVRFTAQGVRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I L + Y+IPLVADIHF+P VA +K+R+NPGNF + ++ E
Sbjct: 69 AANLQHIHAGLCRLGYHIPLVADIHFSPKVAEEALLHVEKVRINPGNFVEMKSGGNLTE- 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
++ + + + E F VE K+ GRA+RIG NHGSLS+R+++ YGD+ GMV+S E
Sbjct: 128 -EEAFDLGHKAVRERFGSFVEDAKRLGRAIRIGVNHGSLSERMLTRYGDTAEGMVQSCME 186
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
+ +C + +F + + SMKASN +VM A RLLV M YPLH+GVTEAG+GEDGR+
Sbjct: 187 YLDVCHEHEFDDVVISMKASNTLVMTAAVRLLVERMDAADMHYPLHIGVTEAGDGEDGRI 246
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+GIG+LL DG+GDTIRVSL+E PE EI R+L
Sbjct: 247 KSAVGIGSLLADGIGDTIRVSLSEDPEHEIPVARKL 282
>gi|427711938|ref|YP_007060562.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. PCC 6312]
gi|427376067|gb|AFY60019.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Synechococcus sp. PCC 6312]
Length = 405
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/295 (46%), Positives = 190/295 (64%), Gaps = 2/295 (0%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRKTR V VG++ IG +P+ VQ+M DT D+ G V + R+ + G ++VR+TV
Sbjct: 21 VRRKTRPVPVGSITIGGGYPVAVQSMINEDTLDIPGAVAGIRRLHEIGCEIVRVTVPSMA 80
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQL 202
A A EI+ +L + +PLVAD+H +AL V++ D +R+NPG + + + ++
Sbjct: 81 HAKAMAEIRATLEKTYQPVPLVADVHHNGMKIALEVSKYVDNVRINPGLYVFEKPKADRT 140
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
EYT E+ + + I E PLV + +++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 141 EYTQAEFDEIGEKIRETLEPLVISLRDQNKSMRIGVNHGSLAERMLFTYGDTPAGMVESA 200
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
EF R+C ++F+N S+KAS VM+ A RL+V M G DYPLHLGVTEAG+GE G
Sbjct: 201 LEFIRLCEDMNFYNLEISLKASRVPVMIAANRLMVKRMDELGMDYPLHLGVTEAGDGEYG 260
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
R+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 261 RIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYGILQALGLRRTMVEYVACP 315
>gi|334146672|ref|YP_004509600.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis TDC60]
gi|333803827|dbj|BAK25034.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis TDC60]
Length = 581
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 178/276 (64%), Gaps = 2/276 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT +G+ +G + PIR+Q+M T D +V++ RI D GAD VR T QG RE
Sbjct: 9 RRKTSVAQIGDTPLGGDFPIRIQSMANVSTMDTQASVDQAARIIDAGADYVRFTAQGVRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I L + Y+IPLVADIHF+P A +K+R+NPGNF + ++ E
Sbjct: 69 AANLQHIHAGLCRLGYHIPLVADIHFSPKAAEEALLHVEKVRINPGNFVEMKSGGNLTE- 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
++ + + + E F VE K+ GRA+RIG NHGSLS+R+++ YGD+ GMV+S E
Sbjct: 128 -EEAFDLGHKAVRERFGSFVEDAKRLGRAIRIGVNHGSLSERMLTRYGDTAEGMVQSCME 186
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
+ +C + +F + + SMKASN +VM A RLLV M YPLH+GVTEAG+GEDGR+
Sbjct: 187 YLDVCHEHEFDDVVISMKASNTLVMTAAVRLLVERMDAADMHYPLHIGVTEAGDGEDGRI 246
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+GIG+LL DG+GDTIRVSL+E PE EI R+L
Sbjct: 247 KSAVGIGSLLADGIGDTIRVSLSEDPEHEIPVARKL 282
>gi|34540704|ref|NP_905183.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis W83]
gi|419970797|ref|ZP_14486274.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis W50]
gi|50400933|sp|Q7MVT7.1|ISPG_PORGI RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|34397018|gb|AAQ66082.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Porphyromonas gingivalis W83]
gi|392610020|gb|EIW92812.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
gingivalis W50]
Length = 581
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 178/276 (64%), Gaps = 2/276 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKT +G+ +G + PIR+Q+M T D +V++ RI D GAD VR T QG RE
Sbjct: 9 RRKTSVAQIGDTPLGGDFPIRIQSMANVSTMDTQASVDQAARIIDAGADYVRFTAQGVRE 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I L + Y+IPLVADIHF+P A +K+R+NPGNF + ++ E
Sbjct: 69 AVNLQHIHAGLCRLGYHIPLVADIHFSPKAAEEALLHVEKVRINPGNFVEMKSGGNLTE- 127
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
++ + + + E F VE K+ GRA+RIG NHGSLS+R+++ YGD+ GMV+S E
Sbjct: 128 -EEAFDLGHKAVRERFGSFVEDAKRLGRAIRIGVNHGSLSERMLTRYGDTAEGMVQSCME 186
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
+ +C + +F + + SMKASN +VM A RLLV M YPLH+GVTEAG+GEDGR+
Sbjct: 187 YLDVCHEHEFDDVVISMKASNTLVMTAAVRLLVERMDAADMHYPLHIGVTEAGDGEDGRI 246
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+GIG+LL DG+GDTIRVSL+E PE EI R+L
Sbjct: 247 KSAVGIGSLLADGIGDTIRVSLSEDPEHEIPVARKL 282
>gi|220909019|ref|YP_002484330.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cyanothece
sp. PCC 7425]
gi|254806874|sp|B8HSI6.1|ISPG_CYAP4 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|219865630|gb|ACL45969.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Cyanothece
sp. PCC 7425]
Length = 407
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 139/295 (47%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRKTR V VG++ IG +P+ VQ+M DT D+ G+V + R+ + G ++VR+TV
Sbjct: 23 VRRKTRPVPVGSITIGGGNPVVVQSMINEDTLDIEGSVAAIRRLHEIGCEIVRVTVPSMA 82
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQL 202
A A EI+ L + +PLVAD+H +AL VA D +R+NPG + + + ++
Sbjct: 83 HAKAMAEIRAKLHRTYKPVPLVADVHHNGLKIALEVANHVDNVRINPGLYVFEKPKADRT 142
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
EYT E+ + I E PLV K +++RIG NHGSL++R++ YGD+P GMVESA
Sbjct: 143 EYTQAEFDEIGAKIRETLEPLVLSLKTQNKSMRIGVNHGSLAERMLFTYGDTPEGMVESA 202
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
EF RIC L +++ S+KAS VM+ A RL+V M G DYPLHLGVTEAG+GE G
Sbjct: 203 LEFIRICESLGYYHLEISLKASRVPVMLAANRLMVQRMDELGMDYPLHLGVTEAGDGEYG 262
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
R+KS GIGTLL +G+GDTIRVSLTE PEKEI C L LG+R ++ P
Sbjct: 263 RIKSTAGIGTLLAEGIGDTIRVSLTEAPEKEIPVCYSILQALGLRKTMVEYVACP 317
>gi|404404690|ref|ZP_10996274.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Alistipes
sp. JC136]
Length = 499
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 175/283 (61%), Gaps = 21/283 (7%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
++ + +RR V +G VAIG +HP+ VQ+MT DT D A +V ++ RI G +VR+T
Sbjct: 8 NLSEFIRRPACEVRIGGVAIGGKHPVAVQSMTNTDTNDTAASVAQIERIDRAGGHIVRLT 67
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
QG+RE + I L + +VADIHF P VA A+ DK+R+NPGN+ +
Sbjct: 68 AQGRREGENLGNIVRQLRADGFRTAVVADIHFVPEVAAVAAKYVDKVRINPGNYRTDHGE 127
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
FE L +E+C++ G A+RIG NHGSL+ R+ +GD+P+GM
Sbjct: 128 FEAL---------------------IEQCRERGVALRIGVNHGSLAKRVFDEWGDTPQGM 166
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA EF R+CR+ DF + SMK+SN VMV AYRLLV M YP+HLGVTEAG
Sbjct: 167 VVSAMEFLRVCRERDFDQVVVSMKSSNTRVMVAAYRLLVEAMDAEDMHYPIHLGVTEAGN 226
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
G +GR+KSA+GIG L+ DG+GDTIRVSLTE PE EI R LA
Sbjct: 227 GIEGRVKSAVGIGALMADGIGDTIRVSLTEAPENEIPVARLLA 269
>gi|406879033|gb|EKD27770.1| hypothetical protein ACD_79C00585G0008 [uncultured bacterium]
Length = 596
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 182/279 (65%), Gaps = 11/279 (3%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R V VGN+ IG HPIRVQ+MT T D TV++++++ + G++LVR+TV+ ++
Sbjct: 8 RRISREVKVGNIIIGGNHPIRVQSMTNTPTLDTKKTVKQIVKLYEAGSELVRLTVEDEKT 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A I+N L + N+PL+ADIHF AL + KIR+NPGN + +
Sbjct: 68 AYNLLNIQNELKKHKINVPLIADIHFNYKAALIACDYVQKIRINPGNL---------VAW 118
Query: 205 TDDEY--QKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
+D+ + EL+ I E SPL+EK KK AVRIG NHGSLS RI+ YG++ +GMV SA
Sbjct: 119 EEDKLNPESELKKITERISPLIEKLKKNNIAVRIGVNHGSLSRRILERYGNTVKGMVVSA 178
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E+ I L++H+ + SMK+S P VM++AYR L + +YPLHLGVTEAGEG
Sbjct: 179 IEYIDIFSALNYHDIVLSMKSSIPQVMIEAYRNLADIIDKKNLNYPLHLGVTEAGEGISA 238
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLA 361
R+KS+ G+G LL +G+GDTIR SLTEPPEKEI ++L
Sbjct: 239 RIKSSFGVGALLLEGIGDTIRFSLTEPPEKEIPVAKKLV 277
>gi|167754010|ref|ZP_02426137.1| hypothetical protein ALIPUT_02297 [Alistipes putredinis DSM 17216]
gi|167658635|gb|EDS02765.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alistipes
putredinis DSM 17216]
Length = 501
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 171/276 (61%), Gaps = 21/276 (7%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
++ K RR +R V +G V IG + PI VQ+MT DTKD + ++ RI G +VR+T
Sbjct: 2 NLTKYERRPSREVRIGRVVIGGDRPIAVQSMTNTDTKDTEACIRQIERIFRAGGPIVRLT 61
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
QG+RE + I L ++ + +VADIHF P VA A+ DK+R+NPGN+ +
Sbjct: 62 AQGRREGENLERIVRRLREEGCDAAVVADIHFVPEVAAIAAKYVDKVRINPGNYNSSHGE 121
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
FE L +++C++ G A+RIG NHGSLS R+ +GD+P GM
Sbjct: 122 FEAL---------------------IDRCRERGVAIRIGVNHGSLSKRVFDEWGDTPEGM 160
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA EF R+CR+ F + SMK+SN VMV AYRLL M G DYPLHLGVTEAG
Sbjct: 161 VASAMEFLRVCREKAFDQVVVSMKSSNTRVMVAAYRLLAEAMEREGMDYPLHLGVTEAGN 220
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +GR+KSA+GIG LL DG+GDTIRVSLTE PE EI
Sbjct: 221 GIEGRIKSAVGIGALLADGIGDTIRVSLTEAPENEI 256
>gi|452822762|gb|EME29778.1| (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [Galdieria
sulphuraria]
Length = 445
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 185/294 (62%), Gaps = 2/294 (0%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG+V IG P+ VQ+M DT + V + + + G ++VR+TV
Sbjct: 40 RRKTRPVWVGDVCIGGGSPVVVQSMINEDTLQIDRCVTAIRNLHEAGCEIVRLTVPSLAH 99
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A IK L + ++PLVAD+H +AL VA+ +K+R+NPG + + + E
Sbjct: 100 AYAVGFIKQKLKETYQDVPLVADVHHNGLKIALEVAKHVEKVRINPGLYVFEKRDPNRTE 159
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
YT E+Q ++E PL+ + G+A+RIG NHGSLS+R++ +GD+P+GMVESA
Sbjct: 160 YTKKEFQSMKDKLKETLKPLIVTLRDQGKAMRIGVNHGSLSERMLFTFGDTPQGMVESAL 219
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
E R+C +LDFHN + SMKAS VM+ AYRLL M G+ YP HLGVTEAG+GE GR
Sbjct: 220 ECIRVCEELDFHNLVISMKASKVPVMLAAYRLLAKRMDEEGFHYPFHLGVTEAGDGEYGR 279
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
+KS +GIGTLL +G+GDTIRVSLTE P KEI C L LG+R ++ P
Sbjct: 280 IKSTLGIGTLLAEGIGDTIRVSLTEDPVKEISVCYGILQGLGLRRTMVEYVACP 333
>gi|284929237|ref|YP_003421759.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[cyanobacterium UCYN-A]
gi|284809681|gb|ADB95378.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[cyanobacterium UCYN-A]
Length = 407
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/308 (43%), Positives = 191/308 (62%), Gaps = 5/308 (1%)
Query: 71 VPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQ 130
V +Q+ +IH RR+TR V VG++ IG P+ VQ+M DT D+ +V + ++ +
Sbjct: 13 VSKQEIDTTIH---RRQTRPVKVGDITIGGGFPVVVQSMINEDTLDIESSVNAIRKLHEI 69
Query: 131 GADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNP 189
G ++VR+TV A A IK L + +PLVAD+H +AL VA+ DK+RVNP
Sbjct: 70 GCEIVRVTVPSMAHAKALAAIKRRLNETYQPVPLVADVHHNGLKIALEVAKHVDKVRVNP 129
Query: 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249
G + + + +Y+ E+++ + I + PL+ + G+A+RIG NHGSL++R++
Sbjct: 130 GLYVFEKHDINRSDYSQKEFKEIGEIIRKTLEPLIISLRDQGKAMRIGVNHGSLAERMLF 189
Query: 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPL 309
YGD+P GMVESA EF RIC L+F+N + S+KAS M+ AYRL+ M +YPL
Sbjct: 190 TYGDTPLGMVESALEFIRICESLEFYNLVISLKASRVPTMLAAYRLMAQRMNELNMNYPL 249
Query: 310 HLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAA 368
HLGVTEAG+GE GR+KS GI TLL + +GDT+RVSLTE PEKEI C L LG+R
Sbjct: 250 HLGVTEAGDGEYGRIKSTAGIATLLAESIGDTLRVSLTESPEKEISVCYGILQALGLRKT 309
Query: 369 ELQQGVAP 376
++ P
Sbjct: 310 MVEYIACP 317
>gi|291514395|emb|CBK63605.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Alistipes
shahii WAL 8301]
Length = 494
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 166/276 (60%), Gaps = 21/276 (7%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
++ K +RR T V +G IG HP+ Q+MT DT D A +V ++ RI G +VR+T
Sbjct: 2 NLSKFMRRTTCEVRIGRTTIGGGHPVACQSMTNTDTNDTAASVAQIERIDRAGGKIVRLT 61
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
QG+RE + I L + +VADIHF P VA A DK+RVNPGN+ R
Sbjct: 62 AQGRREGENLENIVRQLRADGFRTAVVADIHFVPEVAAIAARYVDKVRVNPGNYRLDRGD 121
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
+ L + +C++ G A+R+G NHGSL+ R+ +GD+P+GM
Sbjct: 122 LQSL---------------------IAQCRERGVALRVGVNHGSLAKRVFDEWGDTPQGM 160
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V SA EF R+CR+ DF + SMK+SN VMV AYRLLV M YP+HLGVTEAG
Sbjct: 161 VVSAMEFLRVCRECDFDQVVVSMKSSNTRVMVAAYRLLVEAMDAEDMHYPIHLGVTEAGN 220
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +GR+KSA+GIG L+ DG+GDTIRVSLTE PE EI
Sbjct: 221 GIEGRVKSAVGIGALMADGIGDTIRVSLTEAPENEI 256
>gi|261416776|ref|YP_003250459.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fibrobacter succinogenes subsp. succinogenes S85]
gi|385791608|ref|YP_005822731.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373232|gb|ACX75977.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fibrobacter succinogenes subsp. succinogenes S85]
gi|302327389|gb|ADL26590.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 579
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 187/329 (56%), Gaps = 5/329 (1%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
Y + K VRR+T V VG+ IG PI VQ+MTT KDV TV E + +A G LV
Sbjct: 9 YVDDRFKAVRRETVQVRVGDALIGGNAPILVQSMTTTKPKDVEKTVAETLALAKVGCGLV 68
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADR 195
RIT +A E+ + +P+ ADIHF P A + +K+R+NPGNF D
Sbjct: 69 RITAPTFADAAGLEEVMKRVRAAGCTVPVSADIHFQPKAAFEALKWVEKVRINPGNFVDT 128
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP 255
+ TD +++ + + E F+P V++ K+ GRA+RIG NHGSLS R++ YGD+
Sbjct: 129 -GILTLDQQTDKSFEEGKEKVAEAFTPFVQEAKRLGRAIRIGVNHGSLSARMIYRYGDTV 187
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV-HGWDYPLHLGVT 314
GMVESA E+ +C F + S+K+SNP V + AYRLL A + H YP H+GVT
Sbjct: 188 EGMVESAIEYLAVCEAEHFDQVVLSLKSSNPRVAISAYRLLAARLKQEHFKPYPFHVGVT 247
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
EAG G DGR+KSA GIG LL DGL DTIRVSLTE P E+ + L A+ +
Sbjct: 248 EAGAGSDGRLKSAAGIGALLLDGLADTIRVSLTEDPVAEVPVAQELIKACELKADAPKFA 307
Query: 375 APFEEKHRHYFDFQRRSGQLPIQKEGEEV 403
P EK ++++ R +P+ G ++
Sbjct: 308 VPVLEKDPYHYE---RRETVPVTLAGVKI 333
>gi|407958228|dbj|BAM51468.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Synechocystis
sp. PCC 6803]
Length = 360
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/270 (48%), Positives = 171/270 (63%), Gaps = 2/270 (0%)
Query: 109 MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168
M DT DV G+V + R+ + G ++VR+TV A A +IK L +PLVAD+
Sbjct: 1 MINEDTLDVDGSVAGIRRLHEIGCEIVRVTVPSMAHAKALADIKQKLQATYQAVPLVADV 60
Query: 169 HF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKC 227
H +AL VA+ DK+R+NPG + + ++ Y+D E+ + + I E PLV
Sbjct: 61 HHNGMKIALEVAKHVDKVRINPGLYVFEKPDAQREGYSDQEFAEIGEKIRETLEPLVISL 120
Query: 228 KKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPV 287
+ G+++RIG NHGSLS+R++ YGD+P GMV+SA EF +IC LDF N + SMKAS
Sbjct: 121 RDQGKSMRIGVNHGSLSERMLFTYGDTPEGMVQSALEFIKICESLDFRNLVVSMKASRVP 180
Query: 288 VMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLT 347
VM+ AYRL+V M G DYPLHLGVTEAG+GE GR+KS GI TLL DG+GDTIRVSLT
Sbjct: 181 VMLAAYRLMVKRMDELGMDYPLHLGVTEAGDGEYGRIKSTAGIATLLADGIGDTIRVSLT 240
Query: 348 EPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
E PEKEI C L LG+R ++ P
Sbjct: 241 EAPEKEIPVCYSILQALGLRKTMVEYVACP 270
>gi|37523191|ref|NP_926568.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gloeobacter
violaceus PCC 7421]
gi|50400938|sp|Q7NFA4.1|ISPG_GLOVI RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|35214194|dbj|BAC91563.1| gll3622 [Gloeobacter violaceus PCC 7421]
Length = 396
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/295 (45%), Positives = 176/295 (59%), Gaps = 4/295 (1%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RR TR V VG + IG P+ VQ+M DT D G V + + G +LVR+TV
Sbjct: 14 LRRVTRPVQVGALTIGGNAPVVVQSMINEDTLDTPGAVAAIRALHKAGCELVRVTVPSLA 73
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQL 202
A A I+ +L +PLVAD+H +AL VA DK+R+NPG F RRA+
Sbjct: 74 HARALERIRKTLEDTYRPVPLVADVHHDGGPIALEVARHVDKVRINPGLFVFRRARLG-- 131
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
+YT ++ ++ I E PLV+ +A+RIG NHGSLS+R++ +GD+P GMV+SA
Sbjct: 132 DYTAEDVERARAQIREELKPLVDVLGAQDKAMRIGVNHGSLSERMLYIHGDTPEGMVQSA 191
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
EF IC +L +HN + S+KAS VM+ YRL + G YP HLGVTEAG+GE G
Sbjct: 192 VEFVEICEQLGYHNLVISLKASRVPVMIAVYRLAAKLLDARGMHYPFHLGVTEAGDGEYG 251
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
R+KS GI TLL DG+GDTIRVSLTE P KEI C L LG+R ++ P
Sbjct: 252 RIKSTAGIATLLADGIGDTIRVSLTEDPLKEIPVCYGILQALGLRRTMVEYVACP 306
>gi|406965083|gb|EKD90757.1| hypothetical protein ACD_30C00092G0025 [uncultured bacterium]
Length = 398
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 180/286 (62%), Gaps = 5/286 (1%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR V VG V IG + PI VQTM T DV V +++ + GA+LVR+TV+ R+
Sbjct: 8 RRQTRAVRVGEVFIGGDSPILVQTMANEKTYDVPKVVSQIVNLKRAGAELVRVTVETMRD 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPG--NFADRRAQFEQ 201
A A I+ L +PL ADIH +AL + DK+RVNPG F D R + +
Sbjct: 68 AKALPGIRQGLNDLGVGVPLSADIHHRGTGLALEAVKWVDKVRVNPGLLAFGDGRTETKD 127
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
EYT E ++ + ++ P+++ CK+ G A+RIG NHGSLS+ +M +GD+P GMVES
Sbjct: 128 -EYTPLEIEQRHEENKKALEPIIKSCKERGVAMRIGVNHGSLSNMMMVRFGDTPLGMVES 186
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E+ ++C +LDF + + S+KAS VM A RL+V M DYPLHLG+TEAG G++
Sbjct: 187 ALEYIKLCEELDFKDIIVSLKASRVSVMQGANRLMVKRMDQESMDYPLHLGLTEAGNGQE 246
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC-RRLANLGMR 366
GR+KS +G LLQ+G+GDTIRVSLTE P E+ C L LG+R
Sbjct: 247 GRVKSVAALGPLLQEGIGDTIRVSLTENPINELSVCFDLLQALGIR 292
>gi|334364747|ref|ZP_08513727.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alistipes sp.
HGB5]
gi|390946536|ref|YP_006410296.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Alistipes
finegoldii DSM 17242]
gi|313159123|gb|EFR58498.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alistipes sp.
HGB5]
gi|390423105|gb|AFL77611.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Alistipes
finegoldii DSM 17242]
Length = 493
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 173/312 (55%), Gaps = 44/312 (14%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR + V +G V IG HP+ VQ+MT DT D ++ RI G +VR+T QG+RE
Sbjct: 8 RRPSGEVRIGRVVIGGGHPVAVQSMTNTDTNDTEACAAQIERIDRAGGGIVRLTAQGRRE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
+ I + + ++ +VADIHF P VA A+ DK+R+NPGN+ + E L
Sbjct: 68 GENLANIVRRVREDGFDTAIVADIHFVPEVAAIAAKYVDKVRINPGNYRTDHGELEAL-- 125
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +C++ G A+RIG NHGSLS R+ +GD+P+GMV SA E
Sbjct: 126 -------------------IAQCRERGVALRIGVNHGSLSKRVFDRWGDTPQGMVVSAME 166
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
F R+C+ F + SMK+SN VMV AYRLLV M YP+HLGVTEAG G +GR+
Sbjct: 167 FLRVCKAQGFDQVVVSMKSSNTRVMVAAYRLLVEAMDAEDMHYPIHLGVTEAGNGIEGRI 226
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPFEEKHRHY 384
KSA+GIG L+ DG+GDTIRVSLTE PE EI VA KH
Sbjct: 227 KSAVGIGALMADGIGDTIRVSLTEAPENEIP------------------VAELLVKH--- 265
Query: 385 FDFQRRSGQLPI 396
F RR G+ P+
Sbjct: 266 --FARRPGKFPV 275
>gi|332300592|ref|YP_004442513.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
asaccharolytica DSM 20707]
gi|332177655|gb|AEE13345.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
asaccharolytica DSM 20707]
Length = 571
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 167/276 (60%), Gaps = 8/276 (2%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
S+ + RR + T+ VG +G E P+ +Q+M T + V + +R A +G L R T
Sbjct: 2 SLCRYQRRHSYTIPVGEARLGGESPLLLQSMANVSTMETDLCVAQALRCASEGCQLFRYT 61
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
QG REA I L + +PLVADIHF A + DK+R+NPGNF ++A
Sbjct: 62 AQGVREATNLGVIAERLHAEGCRMPLVADIHFRSEPAFEALKHVDKVRINPGNFLHQKAS 121
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
DDE + I EVF V + + RA+RIG NHGSLS+RI++ YG++P GM
Sbjct: 122 L------DDETARA--EIAEVFGRFVREAQARHRAIRIGVNHGSLSERILAQYGNTPEGM 173
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V S E+ +C L + + SMKASN +VM QA RLLV M V W YPLHLGVTEAG
Sbjct: 174 VASCMEYLEVCDSLGMRDVVISMKASNVLVMTQAVRLLVERMDVLDWHYPLHLGVTEAGA 233
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
GEDGR+KS IGI +LL DGLGDT+RVSL+E PE E+
Sbjct: 234 GEDGRVKSCIGIASLLVDGLGDTLRVSLSEEPEAEL 269
>gi|313885895|ref|ZP_07819635.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
asaccharolytica PR426713P-I]
gi|312924650|gb|EFR35419.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
asaccharolytica PR426713P-I]
Length = 571
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 128/276 (46%), Positives = 166/276 (60%), Gaps = 8/276 (2%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
S+ + RR + T+ VG +G E P+ +Q+M T + V + +R A +G L R T
Sbjct: 2 SLCRYQRRHSYTIPVGEARLGGESPLLLQSMANVSTMETDLCVAQALRCASEGCQLFRYT 61
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
QG REA I L + +PLVADIHF A + DK+R+NPGNF ++A
Sbjct: 62 AQGVREATNLGVIAERLHAEECRMPLVADIHFRSEPAFEALKHVDKVRINPGNFLHQKAS 121
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
DDE + I EVF V + + RA+RIG NHGSLS+RI++ YG++P GM
Sbjct: 122 L------DDETARA--EIAEVFGRFVREAQARHRAIRIGVNHGSLSERILAQYGNTPEGM 173
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V S E+ +C L + + SMKASN +VM QA RLLV M W YPLHLGVTEAG
Sbjct: 174 VASCMEYLEVCDSLRMRDVVISMKASNVLVMTQAVRLLVERMDALDWHYPLHLGVTEAGA 233
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
GEDGR+KS IGI +LL DGLGDT+RVSL+E PE E+
Sbjct: 234 GEDGRVKSCIGIASLLVDGLGDTLRVSLSEEPEAEL 269
>gi|429741394|ref|ZP_19275055.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
catoniae F0037]
gi|429158872|gb|EKY01400.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
catoniae F0037]
Length = 559
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/286 (44%), Positives = 175/286 (61%), Gaps = 6/286 (2%)
Query: 109 MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168
M T T D V + RI GA+ +R T Q KR A I ++L K PLVADI
Sbjct: 1 MATASTLDTEAAVAQAERIISAGAEYLRYTAQDKRVATNLGAIHHALRAKGITTPLVADI 60
Query: 169 HFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK 228
HF P+ A E +K+R+NPGN+ D + + + ++ Y+ + + E F VE+ K
Sbjct: 61 HFNPTAADTALEYVEKVRINPGNYVDSKGN---VAWDEEVYKSMHEKVCERFGAFVERAK 117
Query: 229 KYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVV 288
+ RA+RIG NHGSLS+R++ YGD+P GMV+S E+ +CR+ DFH+ + SMK+SN VV
Sbjct: 118 ELKRALRIGVNHGSLSERMVMLYGDTPEGMVQSCLEYLDVCREHDFHDIVISMKSSNTVV 177
Query: 289 MVQAYRLLVAEMYVHGWD-YPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLT 347
M A RLLV + G+ YPLHLGVTEAGEGEDGR+K A+GIG+LL DG+GDTIRVSL+
Sbjct: 178 MTAAVRLLVERLDELGYPAYPLHLGVTEAGEGEDGRIKRAVGIGSLLADGIGDTIRVSLS 237
Query: 348 EPPEKEIDPCRRLANLGMRAAELQ--QGVAPFEEKHRHYFDFQRRS 391
E PE EI R L + + + +G P ++R+ RR+
Sbjct: 238 EEPECEIPVARALVDYIAQRETMSPPKGELPLWSEYRNLCRDARRN 283
>gi|406883835|gb|EKD31350.1| hypothetical protein ACD_77C00344G0001 [uncultured bacterium]
Length = 451
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 119/268 (44%), Positives = 166/268 (61%), Gaps = 17/268 (6%)
Query: 87 KTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREAD 146
K +V VGN+ IG+ P+ +QTM T ++ + + + +A +G+ ++R+T QG +E +
Sbjct: 2 KRVSVRVGNIIIGNTRPVVIQTMCNTPTGNIDASFNQCLELARKGSQIIRLTTQGIKEVN 61
Query: 147 ACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTD 206
A EIK L PLVAD+HF+ VA+ AE DK+R+NPGNF+ A
Sbjct: 62 ALREIKLRLHNAGITTPLVADVHFSSDVAIAAAEVADKVRINPGNFSKDPA------IAL 115
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFA 266
+EY+K L+ CKK A+RIG NHGSL ++I+ YGDSP GM E+A E+
Sbjct: 116 EEYKK-----------LISICKKRDVAIRIGINHGSLGEKIIEKYGDSPLGMKEAALEWI 164
Query: 267 RICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKS 326
++ ++ DF + S+KASN +M AYRLL +G YPLHLGVTEAG GE GR+KS
Sbjct: 165 KMSQENDFDQIIISLKASNTRIMTDAYRLLYESFKKNGVSYPLHLGVTEAGNGESGRIKS 224
Query: 327 AIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+G+ TLL +G+GDTIRVSLTE P E+
Sbjct: 225 VVGLATLLGEGIGDTIRVSLTEDPANEL 252
>gi|228470214|ref|ZP_04055121.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
uenonis 60-3]
gi|228308165|gb|EEK17028.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Porphyromonas
uenonis 60-3]
Length = 596
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/276 (44%), Positives = 165/276 (59%), Gaps = 8/276 (2%)
Query: 79 SIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
S+ + RR++ +V +G +G E P+ +Q+M T + V + +R A +G L R T
Sbjct: 26 SLCRYQRRQSYSVPIGEARLGGESPLLLQSMANVSTMETDLCVAQALRCASEGCQLFRYT 85
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ 198
QG REA I L + +PLVADIHF A + +K+R+NPGNF ++A
Sbjct: 86 AQGVREATNLGVIAEQLRAEGCRMPLVADIHFRSEPAFEALKHVEKVRINPGNFLHQKAS 145
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGM 258
DDE + I EVF V + + R +RIG NHGSLS+RI++ YG++P GM
Sbjct: 146 L------DDETARA--EIAEVFGRFVREAQARHRTIRIGVNHGSLSERILARYGNTPEGM 197
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
V S E+ +C L + + SMKASN +VM QA RLLV M YPLHLGVTEAG
Sbjct: 198 VASCMEYLEVCDSLRMRDVVISMKASNVLVMTQAVRLLVERMDALDLHYPLHLGVTEAGA 257
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
GEDGR+KS IGI +LL DGLGDT+RVSL+E PE E+
Sbjct: 258 GEDGRVKSCIGIASLLVDGLGDTLRVSLSEEPEAEL 293
>gi|254479456|ref|ZP_05092783.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Carboxydibrachium pacificum DSM 12653]
gi|214034599|gb|EEB75346.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Carboxydibrachium pacificum DSM 12653]
Length = 352
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 174/294 (59%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR + +GN IG +PI VQ+MT DT DV TVE++ R+ ++G D++R+ V ++
Sbjct: 1 MRKLTREIKIGNKKIGGNNPILVQSMTNTDTHDVEKTVEQIKRLEEEGCDIIRVAVPDEK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A + EIK K+ NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAYSIKEIK-----KHINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
EE +VE K+ G +RIG N GSL I++ YG +P +VES
Sbjct: 108 --------------EENIKKVVEAAKERGIPIRIGVNAGSLEKEILNKYGGITPEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + R+ KL F++ + S+K SN + ++AY+L +++ DYPLHLG+TEAG E
Sbjct: 154 ALKSVRLLEKLGFYDIVISLKTSNVPLTIEAYKLASSKV-----DYPLHLGITEAGTLES 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R+ L LG+ L++GV
Sbjct: 209 GTIKSAIGIGTLLYMGIGDTIRVSLTGDPVHEVRVGRQILRALGL----LKEGV 258
>gi|20807847|ref|NP_623018.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Thermoanaerobacter tengcongensis MB4]
gi|22095778|sp|Q8RA30.1|ISPG_THETN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|20516410|gb|AAM24622.1| Essential bacterial protein, involved in density-dependent
regulation of peptidoglycan biosynthesis
[Thermoanaerobacter tengcongensis MB4]
Length = 355
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 174/294 (59%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR + +GN IG +PI VQ+MT DT DV TVE++ R+ ++G D++R+ V ++
Sbjct: 4 MRKLTREIKIGNKKIGGNNPILVQSMTNTDTHDVEKTVEQIKRLEEEGCDIIRVAVPDEK 63
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A + EIK K+ NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 64 AAYSIKEIK-----KHINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 110
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
EE +VE K+ G +RIG N GSL I++ YG +P +VES
Sbjct: 111 --------------EENIKKVVEAAKERGIPIRIGVNAGSLEKEILNKYGGITPEAVVES 156
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + R+ KL F++ + S+K SN + ++AY+L +++ DYPLHLG+TEAG E
Sbjct: 157 ALKSVRLLEKLGFYDIVISLKTSNVPLTIEAYKLASSKV-----DYPLHLGITEAGTLES 211
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R+ L LG+ L++GV
Sbjct: 212 GTIKSAIGIGTLLYMGIGDTIRVSLTGDPVHEVRVGRQILRALGL----LKEGV 261
>gi|294506673|ref|YP_003570731.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Salinibacter
ruber M8]
gi|294343001|emb|CBH23779.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Salinibacter
ruber M8]
Length = 398
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 167/284 (58%), Gaps = 35/284 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R V VGNV IG PI VQTMT + T +V T+EE+ R+AD GAD+VR+ V +
Sbjct: 5 RRSSRPVQVGNVQIGGGAPISVQTMTVSKTHEVETTLEEIERVADAGADIVRVAVPRPED 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +I + +P+VADIHF AL+ E K+R+NPGN R
Sbjct: 65 ADALEDI-----VQGAPVPVVADIHFNYQYALKAIEAGIHKVRINPGNIGKR-------- 111
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E+++E+ +E K+ G +RIG N GSL + I+ +G P+ + ESA
Sbjct: 112 ----EWEREV----------LEAAKEAGVPIRIGVNSGSLEEDILDKHGYPKPQALFESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+CR+ DF + + S+K S+P +M+QAYR + E DYPLHLGVTE+G + G
Sbjct: 158 MRHVEVCRRNDFEDIVISVKHSDPYMMIQAYRKVAEET-----DYPLHLGVTESGSLDTG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGM 365
+KS+IGIG+LL DG+GDTIRVSL P +E+ R L +LG+
Sbjct: 213 TVKSSIGIGSLLADGIGDTIRVSLAADPVEEVKVGHRILKSLGI 256
>gi|192358785|ref|YP_001981968.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cellvibrio
japonicus Ueda107]
gi|238054438|sp|B3PDM1.1|ISPG_CELJU RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|190684950|gb|ACE82628.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cellvibrio
japonicus Ueda107]
Length = 374
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/281 (43%), Positives = 162/281 (57%), Gaps = 36/281 (12%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
+CES VRRK+R +MVGNV +G PI VQ+MT +T DVA TVE++ RI GAD+V
Sbjct: 2 HCES--PIVRRKSRQIMVGNVPVGGGAPISVQSMTNTETTDVAATVEQIRRIQTAGADIV 59
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A L++K NIPLVADIHF +ALRVA+ D +R+NPGN
Sbjct: 60 RVSVPTMEAAEAF-----GLIRKQVNIPLVADIHFDYRIALRVADLGVDCLRINPGNIGR 114
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +V+K + +RIG N GSL + YG+
Sbjct: 115 ----------------------EKRIKAVVDKARDLNIPIRIGVNAGSLEKDLQKKYGEP 152
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P +VESA I L+F+NF S+KAS+ + V AYR L A + + PLHLG+
Sbjct: 153 TPDALVESALRHVEILDGLNFYNFKVSVKASDIFMAVAAYRKLAALI-----EQPLHLGI 207
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSAIG+G LL DG+GDTIRVSL P +EI
Sbjct: 208 TEAGGLRAGTVKSAIGLGALLMDGIGDTIRVSLAADPVEEI 248
>gi|374296766|ref|YP_005046957.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Clostridium clariflavum DSM 19732]
gi|359826260|gb|AEV69033.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Clostridium clariflavum DSM 19732]
Length = 354
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 167/291 (57%), Gaps = 38/291 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KTR V VG +IG + PI VQ+MT DT+D T+ ++ R+ + G D+VR+ V +
Sbjct: 8 RKKTRKVCVGGTSIGGDSPITVQSMTNTDTRDAVSTINQIKRLEEAGCDIVRVAVPDIQA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK ++ IPLVADIHF +A+ + DKIR+NPGN DR
Sbjct: 68 AEAIKEIKKAI-----RIPLVADIHFDYRLAIESIKSGADKIRINPGNIGDR-------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ +VE K+ +RIG N GSL IM+ YG +P MVESA
Sbjct: 115 --------------DRVKAVVEAAKERKIPIRIGVNSGSLEKDIMAKYGGVTPEAMVESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A+I LDFH+ + S+KAS+ + + AYR ++ + DYPLH+GVTEAG G
Sbjct: 161 LGHAKILEDLDFHDIVISLKASSVSMTIAAYRRMIEK-----SDYPLHIGVTEAGTVYRG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
+KSA+G+G LL +G+GDTIRVSLT P +EI R N ++A L++G
Sbjct: 216 TIKSAVGLGCLLAEGIGDTIRVSLTGDPIEEI----RAGNEILKALGLKKG 262
>gi|307243225|ref|ZP_07525396.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Peptostreptococcus stomatis DSM 17678]
gi|306493353|gb|EFM65335.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Peptostreptococcus stomatis DSM 17678]
Length = 351
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VGN+ IG + PI VQ+MTT DT+D T+ ++ R+ + G DLVR+ V +
Sbjct: 5 RRKTRMVRVGNLNIGGDSPISVQSMTTTDTRDAKATISQIHRLEEVGCDLVRVAVV---D 61
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
DA I N ++K NIP+VADIHF +AL V D IR+NPGN
Sbjct: 62 MDAAKNIAN--IKKEINIPIVADIHFDHRLALEAVKSQVDGIRINPGNIG---------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESA 262
L +EV S CK +RIG N GSL +++ YG MVESA
Sbjct: 110 --------SLAKTKEVVSA----CKDNNIPIRIGVNGGSLEKDLLNQYGGPVAEAMVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
RI LDFH+ + S+K S+ + ++AYRL+ + DYPLHLG+TEAG + G
Sbjct: 158 MRHVRILEDLDFHDIVISLKNSDVIRSIEAYRLMSKTV-----DYPLHLGITEAGGIKRG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G+LL DG+GDTIR+SLT P +EI
Sbjct: 213 TIKSAIGVGSLLADGIGDTIRISLTGDPTEEI 244
>gi|429728257|ref|ZP_19262989.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Peptostreptococcus anaerobius VPI 4330]
gi|429150248|gb|EKX93187.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Peptostreptococcus anaerobius VPI 4330]
Length = 351
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 185/323 (57%), Gaps = 39/323 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V +G++ IG ++PI VQ+MTT+DT+D T+++++ + + G D+VRI V
Sbjct: 5 RRKTRVVNIGSIKIGGDNPIAVQSMTTSDTRDPQATIDQILALEEVGCDIVRIAVPDLTA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A IK + NIP+VADIHF +AL E D IR+NPGN D ++
Sbjct: 65 AKAIGTIKAA-----TNIPIVADIHFNYRLALEAVEQGIDAIRINPGNIGD-------ID 112
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESA 262
T +V+ CK +RIG N GSL I+ YG + P MVESA
Sbjct: 113 RT---------------KAVVDACKAKNIPIRIGVNGGSLEKSILEKYGHACPEAMVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + S+K S+ V+AYRL+ ++ DYPLHLG+TE+G E G
Sbjct: 158 LGHIKILEDLDFHDIVISLKNSDIRKSVEAYRLMSEKV-----DYPLHLGITESGGVEKG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KS+IG+G+LL DG+GDTIR+SLT P +EI ++ L ++G+ +++ P
Sbjct: 213 TIKSSIGVGSLLVDGIGDTIRISLTGDPREEIKVGKQILRSIGLLNDKIKIVSCP--TCG 270
Query: 382 RHYFDFQRRSGQLPIQKEGEEVD 404
R D + +GQ I+KE E+++
Sbjct: 271 RCNIDLIKFAGQ--IEKEIEDIE 291
>gi|289423525|ref|ZP_06425326.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Peptostreptococcus anaerobius 653-L]
gi|289156027|gb|EFD04691.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Peptostreptococcus anaerobius 653-L]
Length = 351
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 185/323 (57%), Gaps = 39/323 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V +G++ IG ++PI VQ+MTT+DT+D T+++++ + + G D+VRI V
Sbjct: 5 RRKTRVVNIGSIKIGGDNPIAVQSMTTSDTRDPQATIDQILALEEVGCDIVRIAVPDLTA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A IK + NIP+VADIHF +AL E D IR+NPGN D ++
Sbjct: 65 AKAIGTIKAA-----TNIPIVADIHFNYRLALEAVEQGIDAIRINPGNIGD-------ID 112
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVESA 262
T +V+ CK +RIG N GSL I+ YG + P MVESA
Sbjct: 113 RT---------------KAVVDACKAKNIPIRIGVNGGSLEKSILEKYGHACPEAMVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + S+K S+ V+AYRL+ ++ DYPLHLG+TE+G E G
Sbjct: 158 LGHIKILEDLDFHDIVISLKNSDIRKSVEAYRLMSEKV-----DYPLHLGITESGGVEKG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KS+IG+G+LL DG+GDTIR+SLT P +EI ++ L ++G+ +++ P
Sbjct: 213 TIKSSIGVGSLLVDGIGDTIRISLTGDPREEIKVGKQILRSIGLLNDKIKIVSCPT--CG 270
Query: 382 RHYFDFQRRSGQLPIQKEGEEVD 404
R D + +GQ I+KE E+++
Sbjct: 271 RCNIDLIKFAGQ--IEKEIEDIE 291
>gi|83815534|ref|YP_444820.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Salinibacter
ruber DSM 13855]
gi|83756928|gb|ABC45041.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Salinibacter
ruber DSM 13855]
Length = 457
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 167/284 (58%), Gaps = 35/284 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R V VG+V IG PI VQTMT + T +V T+EE+ R+AD GAD+VR+ V +
Sbjct: 64 RRSSRPVQVGDVQIGGGAPISVQTMTVSKTHEVETTLEEIERVADAGADIVRVAVPRPED 123
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +I + +P+VADIHF AL+ E K+R+NPGN R
Sbjct: 124 ADALEDI-----VQGAPVPVVADIHFNYQYALKAIEAGIHKVRINPGNIGKR-------- 170
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E+++E+ +E K+ G +RIG N GSL + I+ +G P+ + ESA
Sbjct: 171 ----EWEREV----------LEAAKEAGVPIRIGVNSGSLEEDILDKHGYPKPQALFESA 216
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+CR+ DF + + S+K S+P +M+QAYR + E DYPLHLGVTE+G + G
Sbjct: 217 MRHVEVCRRNDFEDIVISVKHSDPYMMIQAYRKVAEET-----DYPLHLGVTESGSLDTG 271
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGM 365
+KS+IGIG+LL DG+GDTIRVSL P +E+ R L +LG+
Sbjct: 272 TVKSSIGIGSLLADGIGDTIRVSLAADPVEEVKVGHRILKSLGI 315
>gi|385678469|ref|ZP_10052397.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
sp. ATCC 39116]
Length = 383
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 177/325 (54%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +GSEHPI VQ+MTT T DV T++++ ++ G D+VR+ +
Sbjct: 18 RRKTRQLMVGNVGVGSEHPISVQSMTTTLTADVNATLQQIAQLTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN ++
Sbjct: 78 AEALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R+M YG +P + ESA
Sbjct: 123 KFDDKVKE-----------IAQAAKDHGTPIRIGVNAGSLDPRLMKKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PV+MV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDIKISVKHNDPVIMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGIQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLADEVTAGLEGMEVPLR 309
>gi|380293391|gb|AFD50343.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, partial
[Micromeria varia]
Length = 112
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/112 (87%), Positives = 107/112 (95%)
Query: 388 QRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDL 447
QRR+GQLP+QKEGEEVDYRGVLHRDGSVLMSV+LD LKAPELLYKSLAAKL+VGMPFKDL
Sbjct: 1 QRRTGQLPVQKEGEEVDYRGVLHRDGSVLMSVTLDHLKAPELLYKSLAAKLIVGMPFKDL 60
Query: 448 ATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLV 499
ATVDSIL+RELP DD +ARL LKRL+DISMGVITPLSEQLTKPLP+A+VLV
Sbjct: 61 ATVDSILVRELPPQDDKNARLVLKRLIDISMGVITPLSEQLTKPLPNALVLV 112
>gi|422346362|ref|ZP_16427276.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens WAL-14572]
gi|373225907|gb|EHP48234.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens WAL-14572]
Length = 349
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V VGN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKVGNIYVGGDFRVSIQSMTNTDTKDVEATVKQIRELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYRLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLAKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVETMIESYRIASQKT-----NYPLHLGVTEAGTPWRG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKAGKEILKNFG 253
>gi|269468797|gb|EEZ80401.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [uncultured
SUP05 cluster bacterium]
Length = 358
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/277 (42%), Positives = 157/277 (56%), Gaps = 34/277 (12%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
+H RRK+R + VG+VAIG + PI VQ+MT DT DV T+ ++ IAD GADLVR++V
Sbjct: 4 VHSIKRRKSRQIFVGDVAIGGDAPISVQSMTNTDTCDVGATLNQIQSIADAGADLVRVSV 63
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQ 198
A+A EIK K NIPL+ DIHF +AL+VAE D +R+NPGN
Sbjct: 64 PTMEAAEAFKEIK-----KRANIPLITDIHFDYKIALKVAEYGADCLRINPGNIGR---- 114
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRG 257
E+ +V K +G +RIG N GSL + Y + +P
Sbjct: 115 ------------------EDRVREVVASAKDHGIPIRIGVNAGSLEKDLQKKYTEPTPEA 156
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
MVESAF I KL+F NF S+KAS + V AY+ L +++ D PLHLG+TEAG
Sbjct: 157 MVESAFRHIDILDKLNFDNFKISLKASEIFMTVFAYKQLASQI-----DNPLHLGITEAG 211
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KS+IG+G LL +G+GDTIRVSL P E+
Sbjct: 212 SFRAGAVKSSIGLGLLLSEGIGDTIRVSLASDPVDEV 248
>gi|18310674|ref|NP_562608.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens str. 13]
gi|20138561|sp|P58667.1|ISPG_CLOPE RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|18145355|dbj|BAB81398.1| peptidoglycan acetylation protein [Clostridium perfringens str. 13]
Length = 349
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V VGN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKVGNIYVGGDFRVSIQSMTNTDTKDVESTVKQIKELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYRLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLTKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVETMIESYRIASQKT-----NYPLHLGVTEAGTPWRG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKVGKEILKNFG 253
>gi|110803791|ref|YP_698979.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens SM101]
gi|110684292|gb|ABG87662.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens SM101]
Length = 349
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V +GN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKIGNIYVGGDFRVSIQSMTNTDTKDVESTVKQIKELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYKLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLAKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVETMIESYRIASQKT-----NYPLHLGVTEAGTPWRG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKVGKEILKNFG 253
>gi|110800593|ref|YP_696379.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens ATCC 13124]
gi|168211420|ref|ZP_02637045.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens B str. ATCC 3626]
gi|422874613|ref|ZP_16921098.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens F262]
gi|110675240|gb|ABG84227.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens ATCC 13124]
gi|170710596|gb|EDT22778.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens B str. ATCC 3626]
gi|380304254|gb|EIA16543.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens F262]
Length = 349
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V VGN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKVGNIYVGGDFRVSIQSMTNTDTKDVEATVKQIRELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYRLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLAKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVETMIESYRIASQKT-----NYPLHLGVTEAGTPWRG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKVGKEILKNFG 253
>gi|168214475|ref|ZP_02640100.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens CPE str. F4969]
gi|168216979|ref|ZP_02642604.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens NCTC 8239]
gi|182627139|ref|ZP_02954854.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens D str. JGS1721]
gi|170714038|gb|EDT26220.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens CPE str. F4969]
gi|177907476|gb|EDT70142.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens D str. JGS1721]
gi|182380924|gb|EDT78403.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens NCTC 8239]
Length = 349
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V VGN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKVGNIYVGGDFRVSIQSMTNTDTKDVEATVKQIRELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYRLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLAKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVETMIESYRIASQKT-----NYPLHLGVTEAGTPWRG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKVGKEILKNFG 253
>gi|168208109|ref|ZP_02634114.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens E str. JGS1987]
gi|170660602|gb|EDT13285.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens E str. JGS1987]
Length = 349
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V VGN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKVGNIYVGGDFRVSIQSMTNTDTKDVESTVKQIKELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYRLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLAKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVEAMIESYRIASQKT-----NYPLHLGVTEAGTPWRG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKVGKEILKNFG 253
>gi|169342689|ref|ZP_02863730.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens C str. JGS1495]
gi|169299195|gb|EDS81265.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
perfringens C str. JGS1495]
Length = 349
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 164/283 (57%), Gaps = 35/283 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R++TR V VGN+ +G + + +Q+MT DTKDV TV+++ + + G D+VR V +
Sbjct: 3 RKETRKVKVGNIYVGGDFRVSIQSMTNTDTKDVESTVKQIKELQEAGCDIVRCAVL---D 59
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
DA IK+ + + NIPLVADIHF +AL+ E IR+NPGN R
Sbjct: 60 MDAACAIKDIVAK--INIPLVADIHFDYRLALKAIENGVSAIRINPGNIGSR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ CK+ +RIG N GSLS +++ YG +P +VESA
Sbjct: 110 --------------EKVEAVVKACKEKNIPIRIGVNSGSLSKELLAKYGKPTPDALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E +I +LDFH+ + SMK+SN M+++YR+ + +YPLHLGVTEAG G
Sbjct: 156 LEHVKILEELDFHDIVISMKSSNVETMIESYRIASQKT-----NYPLHLGVTEAGTPWIG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KSAIGIGTLL +G+GDTIRVSLT P +EI + L N G
Sbjct: 211 TIKSAIGIGTLLAEGIGDTIRVSLTGDPVEEIKVGKEILKNFG 253
>gi|380293387|gb|AFD50341.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, partial
[Micromeria varia]
Length = 111
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/111 (87%), Positives = 106/111 (95%)
Query: 388 QRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDL 447
QRR+GQLP+QKEGEEVDYRGVLHRDGSVLMSV+LD LKAPELLYKSLAAKL+VGMPFKDL
Sbjct: 1 QRRTGQLPVQKEGEEVDYRGVLHRDGSVLMSVTLDHLKAPELLYKSLAAKLIVGMPFKDL 60
Query: 448 ATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVL 498
ATVDSIL+RELP DD +ARL LKRL+DISMGVITPLSEQLTKPLP+A+VL
Sbjct: 61 ATVDSILVRELPPQDDKNARLVLKRLIDISMGVITPLSEQLTKPLPNALVL 111
>gi|345017709|ref|YP_004820062.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Thermoanaerobacter wiegelii Rt8.B1]
gi|344033052|gb|AEM78778.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 353
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 170/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ R+ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIKRLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN +
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGKK------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY-GDSPRGMVES 261
E +VE K+ G +RIG N GSL I+S Y G + +VES
Sbjct: 109 ---------------ENIKKVVEIAKERGIPIRIGVNSGSLEKEILSKYKGVTAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K +N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKNVLILEKLGFYDIVISLKTTNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R L +LG+ L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGRHILRSLGL----LKEGV 258
>gi|395786976|gb|AFN70969.1| hydroxymethyl butenyl diphosphate synthase, partial [Picrorhiza
kurrooa]
Length = 120
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/120 (80%), Positives = 109/120 (90%)
Query: 442 MPFKDLATVDSILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMVLVNL 501
MPFKDLATVDSILLRELP VDD DARLALKRL+DISMGVITPLSEQLTKPLP+A+ +V L
Sbjct: 1 MPFKDLATVDSILLRELPPVDDKDARLALKRLIDISMGVITPLSEQLTKPLPNALAMVTL 60
Query: 502 QELSTGAYKLLPEGTRLVVSLRGDESYEELEILKDIDATMILHDLPFNEDKIGRVQAARR 561
+ELS+GA+KLLPEGTRLVVS+RGDE EELEILK DATMILH+LP++E+K RV AARR
Sbjct: 61 KELSSGAHKLLPEGTRLVVSVRGDEPEEELEILKSTDATMILHELPYSEEKTSRVHAARR 120
>gi|114566426|ref|YP_753580.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114337361|gb|ABI68209.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 351
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 171/294 (58%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRK+R + VG V +G E+P+ VQ+MT+ DT+D+ TV+++ ++ G +LVR+ V +
Sbjct: 1 MRRKSRVIKVGTVPVGGEYPVVVQSMTSTDTRDIERTVKQIKQMEAAGCELVRVAVVDEE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A A IK + NIPL+ADIHF +AL+ E D +R+NPGN +
Sbjct: 61 AAQAISRIKQKI-----NIPLIADIHFDHRLALKSIEAGADGLRINPGNIGE-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+ C++ +RIG N GSL RI+ +G S + MV S
Sbjct: 108 --------------EKKLCEVVKACQEKKTPIRIGVNAGSLDKRILDRFGGISAQAMVAS 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A E ++ +DFH S+KAS+ ++ V+AYRLL A++ DYPLHLG+TEAG +
Sbjct: 154 ALENVKLLEDMDFHEIKLSLKASSVMLTVEAYRLLAAKV-----DYPLHLGITEAGTKDR 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
+KSA+GIG LL +G+GDTIRVSLT P E+ L +LG+R Q+G+
Sbjct: 209 ALIKSALGIGMLLYEGIGDTIRVSLTADPVDEVWAAYEILRSLGLR----QRGI 258
>gi|392375509|ref|YP_003207342.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Methylomirabilis oxyfera]
gi|258593202|emb|CBE69541.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Candidatus Methylomirabilis oxyfera]
Length = 358
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 167/295 (56%), Gaps = 35/295 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V IG E P+ VQ+MT DT+DV TV+++ + G D+VRI V K
Sbjct: 4 RRKTRQIQVGAVKIGGETPVSVQSMTKTDTRDVRATVDQIWALEVAGCDIVRIGVPEKEA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+ +EI+ K IPL+ADIHF +AL E D +R+NPGN DR
Sbjct: 64 AEKLWEIR-----KQIRIPLIADIHFDYRLALIALEQGVDGLRLNPGNIGDR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+EE+ E+ +RIG N GSL +++ G +P+GMVESA
Sbjct: 111 ----------SRVEEIVKAATERKIP----IRIGVNAGSLEKDLLARDGGPTPKGMVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
RI L++ S+KAS+P++M++AYRLL ++ +YPLHLGVTEAG G
Sbjct: 157 LRHIRILEDLNYPEMKVSLKASDPLMMIEAYRLLAEKI-----EYPLHLGVTEAGTPGVG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDP-CRRLANLGMRAAELQQGVAP 376
++SA+GIGTLL +G+GDTIRVSL+ P +EI L +LG+R L P
Sbjct: 212 TIRSAVGIGTLLAEGIGDTIRVSLSADPVEEIKAGVEILKSLGLRRGGLTLVACP 266
>gi|256750784|ref|ZP_05491669.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter ethanolicus CCSD1]
gi|256750367|gb|EEU63386.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter ethanolicus CCSD1]
Length = 353
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 170/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ R+ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIKRLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVES 261
EE +VE K+ G +RIG N GSL I+ Y G + +VES
Sbjct: 108 --------------EENIKKVVEIAKEKGIPIRIGVNSGSLEKEILHKYKGVTAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K +N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKNVLILEKLGFYDIVISLKTTNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R+ L +LG+ L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGRQILRSLGL----LKEGV 258
>gi|387129966|ref|YP_006292856.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Methylophaga sp. JAM7]
gi|386271255|gb|AFJ02169.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Methylophaga sp. JAM7]
Length = 375
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/279 (41%), Positives = 163/279 (58%), Gaps = 34/279 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E ++ RR++R + VGNVAIG + PI VQ+MT +T DVA TV+++ R+ GADLVR+
Sbjct: 2 EGGYQIKRRQSRKIYVGNVAIGGDAPIAVQSMTNTETTDVAATVKQIERLQQVGADLVRV 61
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+V A+A EIK K +PL+ADIHF +ALRVAE D +R+NPGN
Sbjct: 62 SVPSLDAAEAFGEIK-----KQVTLPLIADIHFDYRIALRVAELGVDCLRINPGNIGR-- 114
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SP 255
E+ +++K + YG +RIG N GSL + YG+ +P
Sbjct: 115 --------------------EDRVRAVIDKARDYGIPIRIGVNAGSLEKELQKKYGEPTP 154
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
+VESA I KL++ +F S+KAS+ + V AYR L +++ + PLHLG+TE
Sbjct: 155 EALVESAMRHIDILDKLNYPDFKVSLKASDVFMTVMAYRQLASQI-----EQPLHLGITE 209
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
AG G +KSAIG+G LL +G+GDTIRVSL P +EI
Sbjct: 210 AGGLRSGSVKSAIGLGMLLAEGIGDTIRVSLAADPLEEI 248
>gi|167037628|ref|YP_001665206.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040289|ref|YP_001663274.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Thermoanaerobacter sp. X514]
gi|300914373|ref|ZP_07131689.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter sp. X561]
gi|307724391|ref|YP_003904142.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter sp. X513]
gi|320116043|ref|YP_004186202.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166854529|gb|ABY92938.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter sp. X514]
gi|166856462|gb|ABY94870.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|300889308|gb|EFK84454.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter sp. X561]
gi|307581452|gb|ADN54851.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter sp. X513]
gi|319929134|gb|ADV79819.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 353
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 170/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ R+ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIKRLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVES 261
EE +VE K+ G +RIG N GSL I+ Y G + +VES
Sbjct: 108 --------------EENIKKVVEIAKEKGIPIRIGVNSGSLEKEILHKYKGVTAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K +N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKNVLILEKLGFYDIVISLKTTNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R+ L +LG+ L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGRQILRSLGL----LKEGV 258
>gi|359411430|ref|ZP_09203895.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
sp. DL-VIII]
gi|357170314|gb|EHI98488.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
sp. DL-VIII]
Length = 349
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 156/274 (56%), Gaps = 38/274 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R V VGN+ +G + PI VQ+MTT TKD+ GT++++ ++ D G D+VR V +
Sbjct: 3 RRKSRKVKVGNIYVGGDAPITVQSMTTTRTKDIEGTLKQIEKLYDAGCDIVRCAVLDMDD 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFA--DRRAQFEQ 201
A++ EI + +IP+VADIHF +ALR E +R+NPGN DR
Sbjct: 63 AESLGEI-----TRRASIPVVADIHFDYKLALRAIENGVSALRINPGNIGSVDR------ 111
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+ E C K +RIG N GSL I+ YG + G+VE
Sbjct: 112 ------------------IKAVKEACSKKQIPIRIGVNSGSLEKDILEKYGMPTAEGLVE 153
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDF + + S+K+SN +M++ YRL+ + DYPLHLGVTEAG +
Sbjct: 154 SALRHVKILEDLDFRDIVISIKSSNVQMMIECYRLIAEK-----CDYPLHLGVTEAGTAQ 208
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KS+IGIGTLL +G+GDTIRVSLT P E+
Sbjct: 209 KGTIKSSIGIGTLLSEGIGDTIRVSLTSDPVNEV 242
>gi|373496660|ref|ZP_09587206.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 12_1B]
gi|404368521|ref|ZP_10973871.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
ulcerans ATCC 49185]
gi|313687816|gb|EFS24651.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
ulcerans ATCC 49185]
gi|371965549|gb|EHO83049.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 12_1B]
Length = 356
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 157/277 (56%), Gaps = 34/277 (12%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
+KTR V VGN+ IG E+ I +Q+MT T DV TV ++ R+ + G LVR+T+ A
Sbjct: 2 KKTRAVKVGNIIIGGENNIVIQSMTNTMTSDVEATVAQIKRLEEAGCQLVRMTINNMEAA 61
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLEY 204
+A EIK K IPL ADIHF +AL E DK+R+NPGN
Sbjct: 62 EAIKEIK-----KKVTIPLAADIHFDYKLALAAMENGIDKLRINPGNIGA---------- 106
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAF 263
+E + +V+K K+ +RIG N GSL I+ YG + MVESA
Sbjct: 107 ------------DENVAKVVQKAKEKNIPIRIGVNSGSLEKEILKKYGSPTADAMVESAM 154
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
+ K DFH+ + S+K+SN +MV+AYR + ++ +YPLHLGVTEAG G
Sbjct: 155 YHIGLLEKNDFHDIIVSLKSSNVKMMVEAYRKISEKV-----NYPLHLGVTEAGTAFQGT 209
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSAIGIG+LL DG+G+TIRVSLTE P +EI + +
Sbjct: 210 VKSAIGIGSLLVDGIGNTIRVSLTEDPVEEIKVAKEI 246
>gi|297544669|ref|YP_003676971.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842444|gb|ADH60960.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 353
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 169/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ R+ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIRRLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVES 261
EE +VE K+ G +RIG N GSL I+ Y G + +VES
Sbjct: 108 --------------EENIKKVVEIAKERGVPIRIGVNSGSLEKEILYKYKGITAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKSVLILEKLGFYDIVISLKTPNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R+ L +LG+ L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGRQILRSLGL----LKEGV 258
>gi|406575783|ref|ZP_11051474.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Janibacter
hoylei PVAS-1]
gi|404554825|gb|EKA60336.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Janibacter
hoylei PVAS-1]
Length = 385
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 165/290 (56%), Gaps = 34/290 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR + VG+V +GSE PI VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 18 RRQTRQIKVGSVGVGSESPISVQSMTTTLTSDVNTTLQQIAELTAAGCDIVRVACPSQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA EI ++ IP++ADIHF P + E +RVNPGN +
Sbjct: 78 ADALAEIA-----QHSQIPVIADIHFQPKYVFQAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G ++RIG N GSL R++ YG +P +VESA
Sbjct: 123 KFDDQVKE-----------IANAAKDHGTSIRIGVNAGSLDKRLLEKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PV MV+AY LL D+PLHLGVTEAG G
Sbjct: 172 VWEAGLFEEHDFHDFKISVKHNDPVTMVRAYELLA-----EAGDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA G LL G+GDTIRVSL+ PP +EI ++ L +LG+R +L+
Sbjct: 227 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEIKVGQQILQSLGLRPRKLE 276
>gi|331005907|ref|ZP_08329255.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [gamma
proteobacterium IMCC1989]
gi|330420263|gb|EGG94581.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [gamma
proteobacterium IMCC1989]
Length = 370
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI VQ+MT +T DV TV ++ I GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPISVQSMTNTETTDVVATVGQIQAIQQAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA EI+ K ++PLVADIHF +ALRVA+ D +R+NPGN
Sbjct: 69 ADAFGEIR-----KQVDVPLVADIHFDYRIALRVADLGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +++K K +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EKRILAVIDKAKDLNIPIRIGVNAGSLEKDLQKKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I KL+FH+F S+KAS+ + V+AYR L + D PLHLG+TEAG G
Sbjct: 162 MRHVDILDKLNFHDFKVSVKASDVFMAVEAYRQLATRI-----DQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++G+G LL DG+GDT+RVSL P +E+
Sbjct: 217 TVKSSVGLGILLMDGIGDTMRVSLAADPVQEV 248
>gi|415885530|ref|ZP_11547458.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
methanolicus MGA3]
gi|387591199|gb|EIJ83518.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
methanolicus MGA3]
Length = 370
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 159/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPVKVGNLTIGGNNELVIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRR 196
+R A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAISEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARTFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVQEVKVAREL 252
>gi|289578393|ref|YP_003477020.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter italicus Ab9]
gi|289528106|gb|ADD02458.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter italicus Ab9]
Length = 353
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 169/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ R+ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIRRLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVES 261
EE +VE K+ G +RIG N GSL I+ Y G + +VES
Sbjct: 108 --------------EENIKKVVEIAKERGVPIRIGVNSGSLEKEILYKYKGITAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKSVLILEKLGFYDVVISLKTPNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ R+ L +LG+ L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGRQILRSLGL----LKEGV 258
>gi|302525241|ref|ZP_07277583.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. AA4]
gi|302434136|gb|EFL05952.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. AA4]
Length = 383
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 174/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLMVGSVGVGSDHPISVQSMTTTLTSDVNATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN +
Sbjct: 78 AEALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P + ESA
Sbjct: 123 KFDDQVKE-----------IAQAAKDHGTPIRIGVNAGSLDKRLLEKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 MWEASLFAEHDFHDIKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGAQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 285 RAQVDVYTLADQVTAGLEGMEIPLR 309
>gi|403746137|ref|ZP_10954794.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alicyclobacillus hesperidum URH17-3-68]
gi|403121021|gb|EJY55359.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alicyclobacillus hesperidum URH17-3-68]
Length = 361
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 160/278 (57%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +T+ V VG+V IG H + +Q+MTT T DV TVEE+ R+ D G +VR+TV +
Sbjct: 4 REETKPVRVGDVVIGGNHQVIIQSMTTTKTADVKATVEEIHRLEDAGCQVVRVTVNTRDA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A A EIK + +IPLVADIHF +AL + DK+R+NPGN R
Sbjct: 64 AAAIKEIK-----RQIHIPLVADIHFDHRLALEAIRNGIDKVRINPGNIGKR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+ +EEV V+ CK+ G +RIG N GSL I+ YG +P+GM+ESA
Sbjct: 111 ----------EKVEEV----VKACKERGIPIRIGVNAGSLEKHILEKYGYPTPQGMLESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDF + + SMKAS+ + ++AYRL + YPLHLG+TE+G G
Sbjct: 157 EHHVKILEDLDFDDIIISMKASDVPMAIEAYRLAAERFH-----YPLHLGITESGTLFGG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+GTLL G+G+T+RVSL+ P +EI R L
Sbjct: 212 TIKSAAGLGTLLSMGIGNTMRVSLSADPVEEIKVAREL 249
>gi|334705276|ref|ZP_08521142.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
caviae Ae398]
Length = 376
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 115/273 (42%), Positives = 158/273 (57%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRK+R +MVGNV +G + PI VQTMT T DVA TVE++ RI GAD+VR++V
Sbjct: 14 VRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATVEQIQRIERVGADIVRVSVPTME 73
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 74 AAEAF-----KLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN-------- 120
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
EE +V+ + Y +RIG N GSL + YG+ +P ++ES
Sbjct: 121 --------------EERVRAVVDCARHYNIPIRIGVNGGSLERDLQEKYGEPTPEALLES 166
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A +LDF NF S+KAS+ + V AYRLL ++ D PLHLG+TEAG
Sbjct: 167 AMRHVDYLDRLDFQNFKVSVKASDVFLAVGAYRLLAKQI-----DQPLHLGITEAGGFRA 221
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSAIG+G LL +G+GDT+R+SL P +E+
Sbjct: 222 GAVKSAIGLGMLLSEGIGDTLRISLAADPVEEV 254
>gi|389582702|dbj|GAB65439.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Plasmodium
cynomolgi strain B]
Length = 598
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 224/446 (50%), Gaps = 69/446 (15%)
Query: 223 LVEKCK---KYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF 279
+V +C + RA+RIGTNHGSLS R++SYYGD+P GMVESAFEF+ +C + +F N +F
Sbjct: 30 VVSRCSQMPRLNRAIRIGTNHGSLSSRVLSYYGDTPLGMVESAFEFSDLCIQNNFFNVVF 89
Query: 280 SMKASNPVVMVQAYRLLVAEMY---VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQD 336
SMKASN +M+Q+YRLLVA Y +G +PLHLGVTEAG G++GR+KS +GIG+LL D
Sbjct: 90 SMKASNAYIMIQSYRLLVARQYERMANGLLFPLHLGVTEAGFGDNGRIKSYLGIGSLLYD 149
Query: 337 GLGDTIRVSLTEPPEKEIDPCRRL-ANLGMR-------AAELQQGVAP----------FE 378
G+GDTIR+SLTE P +E+ PC+ L NL R E ++P FE
Sbjct: 150 GIGDTIRISLTEDPWEELTPCKTLIKNLKKRIFYDDHEGGETDGRISPPGDTSPTLLTFE 209
Query: 379 EKHRHYFDFQRRSGQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKL 438
E R++ +R ++K + V+H + ++ V+ +L+ ++K L +L
Sbjct: 210 EHFRNFNKMTKRR----VEKRED------VMHAECTIGNVVTEKELEDSLQIFKDLNLEL 259
Query: 439 -VVGMPFKDLATVDSILLRELPSVDDHD-------ARLALKRLVDISMGVITPLSEQLTK 490
G K + + D +++ +L + A + L + G + LS +
Sbjct: 260 DQNGNLKKGVKSTDILVIPKLGVLSGRSWATLGKLAEAGVHMLAEYDEGDVAMLSGNTNE 319
Query: 491 P-LPHAMVLVNLQEL--------------STGAYKLLPEGTRLVVSLRGDESYEELE-IL 534
H M V+ L + G L V+ + G E +E +
Sbjct: 320 SGYTHGMGQVSRNTLFYLDLNRVQTILQKNEGKIPLHSSAKGYVLVVNGKEDTNLIEQVF 379
Query: 535 KDIDAT------MILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRD 588
I +L +E V A RR E ++ N++ P +H+ N + D
Sbjct: 380 NQIKGKNPPPLFFLLKSDTIHE----HVIATRRFNEIVNSLNIDLPYVHYANV-NSTNYD 434
Query: 589 DLVIGAGTNVGALLVDGLGDGLLLEA 614
D+++ + VG L+D +GDGL++
Sbjct: 435 DMLVDSTLYVGTCLIDLMGDGLIINV 460
>gi|300783956|ref|YP_003764247.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
mediterranei U32]
gi|384147200|ref|YP_005530016.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
mediterranei S699]
gi|399535841|ref|YP_006548503.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
mediterranei S699]
gi|299793470|gb|ADJ43845.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
mediterranei U32]
gi|340525354|gb|AEK40559.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
mediterranei S699]
gi|398316611|gb|AFO75558.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
mediterranei S699]
Length = 389
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 24 RRKTRQLQVGSVGVGSDHPISVQSMTTTLTSDVNATLQQIAELTAAGCDIVRVACPSADD 83
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN +
Sbjct: 84 AEALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 128
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL RIM YG +P + ESA
Sbjct: 129 KFDDQVKE-----------IAQAAKDHGTPIRIGVNAGSLDKRIMDKYGKATPEALAESA 177
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY LL + DYPLHLGVTEAG G
Sbjct: 178 LWEASLFAEHDFHDIKISVKHNDPVVMVRAYELLAEQ-----CDYPLHLGVTEAGPAFQG 232
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL+ G+GDTIRVSL+ PP +E+
Sbjct: 233 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEV 264
>gi|381164880|ref|ZP_09874110.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora azurea NA-128]
gi|418461556|ref|ZP_13032628.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharomonospora azurea SZMC 14600]
gi|359738426|gb|EHK87314.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharomonospora azurea SZMC 14600]
gi|379256785|gb|EHY90711.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora azurea NA-128]
Length = 383
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 175/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGSVGVGSDHPISVQSMTTTVTADVNSTLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN ++
Sbjct: 78 AEALPAIA-----KKSKIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R+M YG +P + ESA
Sbjct: 123 KFDDKVKE-----------IAQSAKDHGTPIRIGVNAGSLDPRLMKKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSSPPVEEVKVGHQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLADEVTAGLEGLEVPLR 309
>gi|423083963|ref|ZP_17072491.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 002-P50-2011]
gi|423087338|ref|ZP_17075726.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 050-P50-2011]
gi|357543761|gb|EHJ25776.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 002-P50-2011]
gi|357544756|gb|EHJ26743.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 050-P50-2011]
Length = 351
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG V IG E+PI +Q+MT DT+D T+ ++ R+ + G D+VR+ V +
Sbjct: 5 RRKTREVSVGTVKIGGENPISIQSMTNTDTRDADATIAQIKRLEEAGCDIVRVAVPDIKA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A +IK+S+ NIP++ADIHF +AL E D IR+NPGN
Sbjct: 65 AKNIAKIKSSV-----NIPIIADIHFDYKLALEAIEQGVDGIRINPGNIG---------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
IE V +VEKCK+ +RIG N GSL ++ YG + +VESA
Sbjct: 110 -----------SIERV-KMVVEKCKERNLKIRIGVNGGSLEKELLKKYGSATTEALVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFHN + S+K+SN V AY L+ ++ DYPLH+G+TE+G G
Sbjct: 158 MGHIKILEDLDFHNIVISLKSSNIYKTVDAYELISKKV-----DYPLHIGITESGSVHKG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL G+GDT+R+SLT P +E+
Sbjct: 213 TIKSSIGVGALLLKGIGDTVRISLTGDPVEEV 244
>gi|224542116|ref|ZP_03682655.1| hypothetical protein CATMIT_01291 [Catenibacterium mitsuokai DSM
15897]
gi|224524953|gb|EEF94058.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Catenibacterium mitsuokai DSM 15897]
Length = 355
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 162/273 (59%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R +TR+V VGN+ IG + + +Q+M TKDV T++++ + G +LVR+ V K
Sbjct: 2 LREETRSVQVGNLTIGGNNHVVIQSMCNTKTKDVEATIKQINALQQAGCELVRVAVFDKE 61
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+A A EIK K +IPLVADIHF +AL E DK+R+NPGN
Sbjct: 62 DAYAIKEIK-----KGIHIPLVADIHFDYKLALIAIESGIDKVRINPGNIGS-------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
IE+V +V+ CKK +RIG N GSL I+ YG+ +P GMVES
Sbjct: 109 -------------IEKV-KAVVDACKKKHIPIRIGVNGGSLEKDILEKYGEPTPEGMVES 154
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + +I LDFH+ + S+K+SN ++ ++AY E+ + YPLH+GVTEAG
Sbjct: 155 AMKHVKILEDLDFHDIVISLKSSNTMLTIKAY-----ELASKTFPYPLHVGVTEAGTALG 209
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KS++GIGTLL +G+G+TIRVSL++ P +EI
Sbjct: 210 GTIKSSLGIGTLLYEGIGNTIRVSLSDDPVEEI 242
>gi|363423275|ref|ZP_09311344.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
pyridinivorans AK37]
gi|359732019|gb|EHK81046.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
pyridinivorans AK37]
Length = 384
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 174/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +GS+HP+ VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQLMVGNVGVGSDHPVSVQSMTTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 79 ADAL-----PIIAKKSKIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M+ YG +P +VES
Sbjct: 123 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRLMAKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 172 ALWEASLFEEHGFGDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 227 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGTQILQSLNLRPRKLE--IVSCPSC 284
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 285 GRAQVDVYSLANEVTAGLEGMEVPLR 310
>gi|326389442|ref|ZP_08211009.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter ethanolicus JW 200]
gi|325994447|gb|EGD52872.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter ethanolicus JW 200]
Length = 353
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 169/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ R+ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIKRLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVES 261
EE +VE K+ G +RIG N GSL I+ Y G + +VES
Sbjct: 108 --------------EENIKKVVEIAKEKGIPIRIGVNSGSLEKEILHKYKGVTAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K +N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKNVLILEKLGFYDIVISLKTTNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ ++ L +LG L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGKQILRSLGF----LKEGV 258
>gi|421495453|ref|ZP_15942736.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
media WS]
gi|407185528|gb|EKE59302.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
media WS]
Length = 371
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 161/280 (57%), Gaps = 36/280 (12%)
Query: 79 SIHKT--VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVR 136
S H++ +RR++R +MVGNV +G PI VQTMT T DVA TVE++ RI GAD+VR
Sbjct: 2 SAHESPIIRRQSRQIMVGNVPVGGNAPITVQTMTNTKTTDVAATVEQIQRIERVGADIVR 61
Query: 137 ITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADR 195
++V A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 62 VSVPTMEAAEAF-----RLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN- 115
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-S 254
EE +V+ + Y +RIG N GSL I YG+ +
Sbjct: 116 ---------------------EERVRAVVDCARHYNIPIRIGVNGGSLERDIQEKYGEPT 154
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P ++ESA +L+F NF S+KAS+ + V AYRLL ++ D PLHLG+T
Sbjct: 155 PEALLESAMRHVDYLDRLNFENFKVSVKASDVFLAVGAYRLLAKQI-----DQPLHLGIT 209
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG G +KSAIG+G LL DG+GDTIR+SL P +E+
Sbjct: 210 EAGGFRAGAVKSAIGLGMLLADGIGDTIRISLAADPVEEV 249
>gi|138896040|ref|YP_001126493.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermodenitrificans NG80-2]
gi|196248933|ref|ZP_03147633.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. G11MC16]
gi|166217108|sp|A4IQZ4.1|ISPG_GEOTN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|134267553|gb|ABO67748.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus thermodenitrificans NG80-2]
gi|196211809|gb|EDY06568.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. G11MC16]
Length = 374
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 160/285 (56%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VG++ IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGSLTIGGNNEVIIQSMTTTKTHDVDATVAQIHRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R ADA EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAADAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGVPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLH+G+TE
Sbjct: 153 EGMVESALYHIRILEELDFHDIIVSLKASDVRLAIEAY-----EKAARTFDYPLHVGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
AG G +KSA+G+G +L G+G+TIR+SL+ P +E+ R +
Sbjct: 208 AGTLFSGTIKSAVGLGAILSKGIGNTIRISLSADPVEEVKVAREI 252
>gi|348169323|ref|ZP_08876217.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharopolyspora spinosa NRRL 18395]
Length = 384
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 177/325 (54%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GSEHP+ VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGAVGVGSEHPVSVQSMTTTVTADINSTLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ QK+ IP++ADIHF P E +RVNPGN ++
Sbjct: 78 AEAL----PAIAQKS-KIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R+M YG +P + ESA
Sbjct: 123 KFDDKVKE-----------IAQAAKDHGTPIRIGVNAGSLDPRLMQKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEIKVGTQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLAEEVTAGLEGMEVPLR 309
>gi|418357102|ref|ZP_12959806.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
salmonicida subsp. salmonicida 01-B526]
gi|356689898|gb|EHI54432.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
salmonicida subsp. salmonicida 01-B526]
Length = 371
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 162/280 (57%), Gaps = 36/280 (12%)
Query: 79 SIHKT--VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVR 136
S H++ +RRK+R +MVGNV +G + PI VQTMT T DVA TVE++ RI GAD+VR
Sbjct: 2 SAHESPIIRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATVEQIRRIERVGADIVR 61
Query: 137 ITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADR 195
++V A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 62 VSVPTMEAAEAF-----RLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN- 115
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-S 254
EE +V+ + Y +RIG N GSL I YG+ +
Sbjct: 116 ---------------------EERVRAVVDCARHYNIPIRIGVNGGSLEKDIQEKYGEPT 154
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P ++ESA +L+F NF S+KAS+ + + AYRLL ++ + PLHLG+T
Sbjct: 155 PEALLESAMRHVDYLDRLNFDNFKVSVKASDVFLAIGAYRLLAKQI-----EQPLHLGIT 209
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG G +KSA+G+G LL DG+GDTIR+SL P +EI
Sbjct: 210 EAGGFRAGAVKSAVGLGMLLADGIGDTIRISLAADPVEEI 249
>gi|311030791|ref|ZP_07708881.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
m3-13]
Length = 368
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 159/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR V VG++ IG + + +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPVKVGDITIGGSNELFIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A +IK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAIADIK-----KQINIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ CK+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKACKEKGIPIRIGVNAGSLEKRIIEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|373859052|ref|ZP_09601784.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
sp. 1NLA3E]
gi|372451143|gb|EHP24622.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
sp. 1NLA3E]
Length = 368
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 157/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR + VGN+ IG + +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EMIHRT---KTRPIKVGNLTIGGNSELVIQSMTTTKTHDVEATVAEIKRLEEAGCQMVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL-RVAECFDKIRVNPGNFADRR 196
+R A+A EIK K NIPLV DIHF +AL +A DKIR+NPGN R
Sbjct: 60 ACPDERAANAISEIK-----KRINIPLVVDIHFDYKLALIAIAGGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKRILDKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVTLAIEAY-----EKAARAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|306821540|ref|ZP_07455140.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Eubacterium
yurii subsp. margaretiae ATCC 43715]
gi|304550434|gb|EFM38425.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Eubacterium
yurii subsp. margaretiae ATCC 43715]
Length = 348
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 160/284 (56%), Gaps = 34/284 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V G++ +G ++ I +Q+MT T DVA TV +++++ +G +VR++V K
Sbjct: 4 RRKTRAVRCGDIFVGGDNDIVIQSMTNTKTSDVASTVNQILQLEKEGCQMVRVSVPDKDS 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A +IK + +IPLVADIHF +AL E DK+R+NPGN D
Sbjct: 64 AKAISKIKEKI-----HIPLVADIHFDYLLALESIENGIDKLRINPGNIGD--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
+E + K K+Y +RIG N GSL I YG +P+ MVESA
Sbjct: 110 -------------DERVRQVAIKAKQYNVPIRIGVNMGSLEKNIQEKYGRTPKAMVESAM 156
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
R+ K DF++ + S+KAS M+++Y E + DYPLHLGVTEAG G
Sbjct: 157 YNIRLLEKYDFNDIIVSLKASEIETMIESY-----ESFAQISDYPLHLGVTEAGTLRGGT 211
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
+KSA+GIG LL +G+GDTIRVSLT P +EI + L N+G +
Sbjct: 212 VKSAMGIGHLLLNGIGDTIRVSLTADPIEEIPVAKMILQNIGYK 255
>gi|402310869|ref|ZP_10829828.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Eubacterium
sp. AS15]
gi|400366798|gb|EJP19822.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Eubacterium
sp. AS15]
Length = 348
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 160/284 (56%), Gaps = 34/284 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V G++ +G ++ I +Q+MT T DVA TV +++++ +G +VR++V K
Sbjct: 4 RRKTRAVRCGDIFVGGDNDIVIQSMTNTKTSDVASTVNQILQLEKEGCQMVRVSVPDKDS 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A +IK + +IPLVADIHF +AL E DK+R+NPGN D
Sbjct: 64 AKAISKIKEKI-----HIPLVADIHFDYLLALESIENGIDKLRINPGNIGD--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
+E + K K+Y +RIG N GSL I YG +P+ MVESA
Sbjct: 110 -------------DERVRQVAIKAKQYNVPIRIGVNMGSLEKNIQEKYGRTPKAMVESAM 156
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
R+ K DF++ + S+KAS M+++Y E + DYPLHLGVTEAG G
Sbjct: 157 YNIRLLEKYDFNDIIVSLKASEIETMIESY-----ESFAQISDYPLHLGVTEAGTLRGGT 211
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
+KSA+GIG LL +G+GDTIRVSLT P +EI + L N+G +
Sbjct: 212 VKSAMGIGHLLLNGIGDTIRVSLTADPIEEIPVAKMILQNIGYK 255
>gi|94501125|ref|ZP_01307648.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Oceanobacter
sp. RED65]
gi|94426701|gb|EAT11686.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Oceanobacter
sp. RED65]
Length = 373
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 160/279 (57%), Gaps = 34/279 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
+ I RRK+R +MVGNV +G + PI VQ+MT DT DVA TV ++ + D GAD+VR+
Sbjct: 4 QGISPIKRRKSRQIMVGNVPVGGDAPIAVQSMTNTDTCDVAATVAQIKALEDVGADIVRV 63
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+V A+A +I+ K N+PLV+DIHF +ALRVAE D +R+NPGN
Sbjct: 64 SVPTMDAAEAFGQIR-----KQVNVPLVSDIHFDYKIALRVAELGVDCLRINPGNIGR-- 116
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SP 255
E+ +V+ K G +RIG N GSL + YG+ +P
Sbjct: 117 --------------------EDRVRAVVDAAKDKGIPIRIGVNAGSLEKDLQKKYGEPTP 156
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
+VESA I KL+F +F S+KAS+ + V AYR + +++ + PLHLG+TE
Sbjct: 157 EALVESAMRHIDILDKLNFPDFKLSLKASDVFMTVAAYRQIASQI-----EQPLHLGITE 211
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
AG G +KS++G+G LL DG+GDT+RVSL P +EI
Sbjct: 212 AGGLRSGTVKSSVGLGMLLMDGIGDTLRVSLAADPVEEI 250
>gi|119505389|ref|ZP_01627463.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [marine gamma
proteobacterium HTCC2080]
gi|119458844|gb|EAW39945.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [marine gamma
proteobacterium HTCC2080]
Length = 375
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNVA+G + PI VQ+MT +T DVA TV +V IAD GAD+VRI+V
Sbjct: 9 RRKSRQIMVGNVAVGGDAPISVQSMTNTETCDVAATVAQVQAIADAGADIVRISVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA +I+ + +PLVADIHF +AL+VAE D +R+NPGN
Sbjct: 69 ADAFRDIRTQV-----TVPLVADIHFDHKIALKVAEYGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE ++ CK G +RIG N GSL +M Y + + +VESA
Sbjct: 115 -------------EEKVKEVIAACKDRGIPIRIGVNAGSLGKELMRKYPEPTAEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I + DF +F S+KAS + AYR L ++ + PLHLG+TEAG G
Sbjct: 162 LRNVDILNRYDFEDFKVSVKASEIFMAQAAYRSLSTQI-----EQPLHLGITEAGGLRGG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL DG+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGALLLDGIGDTIRISLAADPVEEV 248
>gi|145299531|ref|YP_001142372.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|142852303|gb|ABO90624.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 383
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 162/280 (57%), Gaps = 36/280 (12%)
Query: 79 SIHKT--VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVR 136
S H++ +RRK+R +MVGNV +G + PI VQTMT T DVA TVE++ RI GAD+VR
Sbjct: 2 SAHESPIIRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATVEQIRRIERVGADIVR 61
Query: 137 ITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADR 195
++V A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 62 VSVPTMEAAEAF-----RLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN- 115
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-S 254
EE +V+ + Y +RIG N GSL I YG+ +
Sbjct: 116 ---------------------EERVRAVVDCARHYNIPIRIGVNGGSLEKDIQEKYGEPT 154
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P ++ESA +L+F NF S+KAS+ + + AYRLL ++ + PLHLG+T
Sbjct: 155 PEALLESAMRHVDYLDRLNFDNFKVSVKASDVFLAIGAYRLLAKQI-----EQPLHLGIT 209
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG G +KSA+G+G LL DG+GDTIR+SL P +EI
Sbjct: 210 EAGGFRAGAVKSAVGLGMLLADGIGDTIRISLAADPVEEI 249
>gi|15598998|ref|NP_252492.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PAO1]
gi|116051828|ref|YP_789329.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa UCBPP-PA14]
gi|218889913|ref|YP_002438777.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa LESB58]
gi|254236707|ref|ZP_04930030.1| hypothetical protein PACG_02717 [Pseudomonas aeruginosa C3719]
gi|254242494|ref|ZP_04935816.1| hypothetical protein PA2G_03244 [Pseudomonas aeruginosa 2192]
gi|296387682|ref|ZP_06877157.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PAb1]
gi|313109221|ref|ZP_07795189.1| putative isoprenoid biosynthetic protein GcpE [Pseudomonas
aeruginosa 39016]
gi|355639720|ref|ZP_09051330.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. 2_1_26]
gi|386057202|ref|YP_005973724.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa M18]
gi|386067894|ref|YP_005983198.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa NCGM2.S1]
gi|392982470|ref|YP_006481057.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa DK2]
gi|416865667|ref|ZP_11915779.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa 138244]
gi|416875227|ref|ZP_11918571.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa 152504]
gi|418585958|ref|ZP_13150004.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa MPAO1/P1]
gi|418589835|ref|ZP_13153754.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa MPAO1/P2]
gi|419757099|ref|ZP_14283444.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PADK2_CF510]
gi|420137997|ref|ZP_14645940.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa CIG1]
gi|421152385|ref|ZP_15611965.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa ATCC 14886]
gi|421158387|ref|ZP_15617646.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa ATCC 25324]
gi|421165946|ref|ZP_15624224.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa ATCC 700888]
gi|421172945|ref|ZP_15630700.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa CI27]
gi|421179027|ref|ZP_15636624.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa E2]
gi|421518348|ref|ZP_15965022.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PAO579]
gi|424939330|ref|ZP_18355093.1| probable isoprenoid biosynthetic protein GcpE [Pseudomonas
aeruginosa NCMG1179]
gi|451985681|ref|ZP_21933894.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas aeruginosa 18A]
gi|20138742|sp|Q9HXJ4.1|ISPG_PSEAE RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|122260975|sp|Q02RV7.1|ISPG_PSEAB RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|226722791|sp|B7UWI8.1|ISPG_PSEA8 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|9949976|gb|AAG07190.1|AE004798_13 probable isoprenoid biosynthetic protein GcpE [Pseudomonas
aeruginosa PAO1]
gi|115587049|gb|ABJ13064.1| putative isoprenoid biosynthetic protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126168638|gb|EAZ54149.1| hypothetical protein PACG_02717 [Pseudomonas aeruginosa C3719]
gi|126195872|gb|EAZ59935.1| hypothetical protein PA2G_03244 [Pseudomonas aeruginosa 2192]
gi|218770136|emb|CAW25898.1| probable isoprenoid biosynthetic protein GcpE [Pseudomonas
aeruginosa LESB58]
gi|310881691|gb|EFQ40285.1| putative isoprenoid biosynthetic protein GcpE [Pseudomonas
aeruginosa 39016]
gi|334834351|gb|EGM13322.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa 138244]
gi|334842196|gb|EGM20808.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa 152504]
gi|346055776|dbj|GAA15659.1| probable isoprenoid biosynthetic protein GcpE [Pseudomonas
aeruginosa NCMG1179]
gi|347303508|gb|AEO73622.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa M18]
gi|348036453|dbj|BAK91813.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa NCGM2.S1]
gi|354831768|gb|EHF15775.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. 2_1_26]
gi|375043632|gb|EHS36248.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa MPAO1/P1]
gi|375051371|gb|EHS43840.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa MPAO1/P2]
gi|384396854|gb|EIE43272.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PADK2_CF510]
gi|392317975|gb|AFM63355.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa DK2]
gi|403249262|gb|EJY62775.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa CIG1]
gi|404347830|gb|EJZ74179.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PAO579]
gi|404525145|gb|EKA35421.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa ATCC 14886]
gi|404536616|gb|EKA46252.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa CI27]
gi|404539449|gb|EKA48930.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa ATCC 700888]
gi|404547545|gb|EKA56539.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa E2]
gi|404549674|gb|EKA58521.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa ATCC 25324]
gi|451756730|emb|CCQ86417.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas aeruginosa 18A]
gi|453043517|gb|EME91247.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PA21_ST175]
Length = 371
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 161/281 (57%), Gaps = 37/281 (13%)
Query: 79 SIHKT---VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
SIH +RRK+R + VGNV +G + PI VQ+MT +T DVA TV ++ R+ D GAD+V
Sbjct: 2 SIHSASPIIRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIV 61
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A +IK + N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 62 RVSVPDMDAAEAFGKIK-----QQVNVPLVADIHFDYRIALRVAELGVDCLRINPGNIGR 116
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +V+ ++ +RIG N GSL + YG+
Sbjct: 117 ----------------------EDRVKAVVDAARERNIPIRIGVNAGSLEKDLQKKYGEP 154
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P ++ESA KLDF NF S+KAS+ + V AYRLL ++ + PLHLG+
Sbjct: 155 TPEALLESAMRHVDHLDKLDFQNFKVSVKASDVFMAVAAYRLLARQI-----EQPLHLGI 209
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 210 TEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 250
>gi|392940947|ref|ZP_10306591.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter siderophilus SR4]
gi|392292697|gb|EIW01141.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacter siderophilus SR4]
Length = 336
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 169/294 (57%), Gaps = 39/294 (13%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +GN IG +PI VQ+MT DT D+ T+E++ ++ +G D++R+ V
Sbjct: 1 MRKITREVKIGNKKIGGNNPILVQSMTNTDTHDIEKTIEQIKKLEAEGCDIIRVAVPDME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK KN NIPLVADIHF +A++ E DKIR+NPGN
Sbjct: 61 AAEAIKEIK-----KNINIPLVADIHFDYRLAIKSIENGADKIRINPGNIGR-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVES 261
EE +VE K+ G +RIG N GSL I+ Y G + +VES
Sbjct: 108 --------------EENIKKVVEIAKEKGIPIRIGVNSGSLEKEILHKYKGVTAEAVVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL F++ + S+K +N + ++AY+L +++ DYPLH+G+TEAG E
Sbjct: 154 ALKNVLILEKLGFYDIVISLKTTNVPLTIEAYKLASSKV-----DYPLHVGITEAGTIEA 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGV 374
G +KSAIGIGTLL G+GDTIRVSLT P E+ ++ L +LG L++GV
Sbjct: 209 GTIKSAIGIGTLLYLGIGDTIRVSLTGDPVHEVRVGKQILRSLGF----LKEGV 258
>gi|117620831|ref|YP_856295.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117562238|gb|ABK39186.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 371
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 162/280 (57%), Gaps = 36/280 (12%)
Query: 79 SIHKT--VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVR 136
S H++ +RRK+R +MVGNV +G + PI VQTMT T DVA TVE++ RI GAD+VR
Sbjct: 2 SAHESPIIRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATVEQIQRIERVGADIVR 61
Query: 137 ITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADR 195
++V A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 62 VSVPTMEAAEAF-----KLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN- 115
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-S 254
EE +V+ + Y +RIG N GSL I YG+ +
Sbjct: 116 ---------------------EERVRAVVDCARHYNIPIRIGVNGGSLEKDIQEKYGEPT 154
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P ++ESA +L+F NF S+KAS+ + V AYRLL ++ + PLHLG+T
Sbjct: 155 PEALLESAMRHVDYLDRLNFDNFKVSVKASDVFLAVGAYRLLAKQI-----EQPLHLGIT 209
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG G +KSAIG+G LL +G+GDT+R+SL P +EI
Sbjct: 210 EAGGFRAGAVKSAIGLGMLLSEGIGDTLRISLAADPVEEI 249
>gi|254490118|ref|ZP_05103310.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Methylophaga
thiooxidans DMS010]
gi|224464706|gb|EEF80963.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Methylophaga
thiooxydans DMS010]
Length = 374
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + P+ VQ+MT +T DVA TV ++ + + GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPVAVQSMTNTETTDVAATVAQIQALQNVGADIVRVSVPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK K +IPLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGQIK-----KQVSIPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+K + YG +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDKARDYGIPIRIGVNAGSLEKELQKKYGEPTPDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +L++ +F S+KAS+ + V AYR L ++ + PLHLG+TEAG G
Sbjct: 162 LRHIDILDRLNYPDFKVSLKASDVFMTVHAYRKLADQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL +G+GDTIRVSL P +EI
Sbjct: 217 SVKSSIGLGMLLAEGIGDTIRVSLAADPVEEI 248
>gi|423650145|ref|ZP_17625715.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD169]
gi|401282563|gb|EJR88462.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD169]
Length = 370
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
>gi|198283713|ref|YP_002220034.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666696|ref|YP_002426342.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|415974293|ref|ZP_11558748.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus sp. GGI-221]
gi|226722778|sp|B7JC30.1|ISPG_ACIF2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|226741005|sp|B5EJF3.1|ISPG_ACIF5 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|198248234|gb|ACH83827.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518909|gb|ACK79495.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|339833839|gb|EGQ61649.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus sp. GGI-221]
Length = 366
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG VAIG + PI VQ+MT +T+D+A TV ++ R+ GAD+VRI+V
Sbjct: 9 RRKTRQIHVGKVAIGGDAPISVQSMTNTETRDIAATVAQIRRLEAVGADIVRISVPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ + PLVADIHF +AL+V E D +R+NPGN L+
Sbjct: 69 AEAFKTIRAQV-----ETPLVADIHFDHRIALQVMEDGVDGLRINPGNIG-------SLD 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
T +VE K G +RIG N GSL I YG+ +P +VESA
Sbjct: 117 KT---------------RLVVEMAKDKGIPIRIGVNAGSLEKDIQEKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +L+FH+ S+KAS+ + V AYRLL ++ DYPLHLG+TEAG G
Sbjct: 162 LRHVSILDELNFHDVKISVKASDIFLAVSAYRLLSEKV-----DYPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G LL+DG+GDTIRVSL P +EI
Sbjct: 217 TVKSAIGLGLLLRDGIGDTIRVSLAADPVEEI 248
>gi|452950197|gb|EME55661.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Amycolatopsis
decaplanina DSM 44594]
Length = 383
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 171/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GSEHPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGPVGVGSEHPISVQSMTTTLTSDVNATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN +
Sbjct: 78 AEALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G +RIG N GSL RIM YG +P + ESA
Sbjct: 123 KFDDQVKE-----------IARAAKDHGTPIRIGVNAGSLDKRIMDKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDVKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L ++ +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGIQILQSLNLKERKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 285 RAQVDVYTLAEQVTAGLEGMEVPLR 309
>gi|228960544|ref|ZP_04122193.1| hypothetical protein bthur0005_40100 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|423631003|ref|ZP_17606750.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD154]
gi|228799144|gb|EEM46112.1| hypothetical protein bthur0005_40100 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|401264370|gb|EJR70482.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD154]
Length = 370
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
>gi|254975724|ref|ZP_05272196.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-66c26]
gi|255093111|ref|ZP_05322589.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile CIP 107932]
gi|255314853|ref|ZP_05356436.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-76w55]
gi|255517527|ref|ZP_05385203.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-97b34]
gi|255650638|ref|ZP_05397540.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-37x79]
gi|260683728|ref|YP_003215013.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile CD196]
gi|260687388|ref|YP_003218522.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile R20291]
gi|306520566|ref|ZP_07406913.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-32g58]
gi|384361357|ref|YP_006199209.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile BI1]
gi|260209891|emb|CBA63822.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile CD196]
gi|260213405|emb|CBE05044.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile R20291]
Length = 351
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG V IG E+PI +Q+MT DT+D T+ ++ R+ + G D+VR+ V +
Sbjct: 5 RRKTREVSVGTVKIGGENPISIQSMTNTDTRDADATIAQIKRLEEAGCDIVRVAVPDIKA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A +IK+S+ NIP++ADIHF +AL E D IR+NPGN R
Sbjct: 65 AKNIAKIKSSV-----NIPIIADIHFDYKLALEAIEQGVDGIRINPGNIGSR-------- 111
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +VEKCK+ +RIG N GSL ++ +G + +VESA
Sbjct: 112 --------------ERVKMVVEKCKERNLKIRIGVNGGSLEKELLKKHGSATAEALVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFHN + S+K+S+ V AY L+ ++ DYPLH+G+TE+G G
Sbjct: 158 MGHIKILEDLDFHNIVISLKSSDIYKTVDAYELISKKV-----DYPLHIGITESGSVHKG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL G+GDT+R+SLT P +E+
Sbjct: 213 TIKSSIGVGALLLKGIGDTVRISLTGDPVEEV 244
>gi|423561251|ref|ZP_17537527.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MSX-A1]
gi|401201508|gb|EJR08373.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MSX-A1]
Length = 370
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|30022358|ref|NP_833989.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus ATCC 14579]
gi|206971260|ref|ZP_03232211.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AH1134]
gi|218234695|ref|YP_002369086.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus B4264]
gi|228923030|ref|ZP_04086323.1| hypothetical protein bthur0011_40110 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228954562|ref|ZP_04116587.1| hypothetical protein bthur0006_39320 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229047996|ref|ZP_04193572.1| hypothetical protein bcere0027_39710 [Bacillus cereus AH676]
gi|229071781|ref|ZP_04204996.1| hypothetical protein bcere0025_39500 [Bacillus cereus F65185]
gi|229081538|ref|ZP_04214036.1| hypothetical protein bcere0023_41710 [Bacillus cereus Rock4-2]
gi|229111752|ref|ZP_04241300.1| hypothetical protein bcere0018_39970 [Bacillus cereus Rock1-15]
gi|229129556|ref|ZP_04258526.1| hypothetical protein bcere0015_39990 [Bacillus cereus BDRD-Cer4]
gi|229146864|ref|ZP_04275229.1| hypothetical protein bcere0012_40040 [Bacillus cereus BDRD-ST24]
gi|229152479|ref|ZP_04280671.1| hypothetical protein bcere0011_40170 [Bacillus cereus m1550]
gi|229180556|ref|ZP_04307898.1| hypothetical protein bcere0005_39010 [Bacillus cereus 172560W]
gi|229192488|ref|ZP_04319451.1| hypothetical protein bcere0002_41410 [Bacillus cereus ATCC 10876]
gi|296504774|ref|YP_003666474.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis BMB171]
gi|365158931|ref|ZP_09355119.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
7_6_55CFAA_CT2]
gi|423411922|ref|ZP_17389042.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG3O-2]
gi|423426414|ref|ZP_17403445.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG3X2-2]
gi|423432292|ref|ZP_17409296.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG4O-1]
gi|423437727|ref|ZP_17414708.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG4X12-1]
gi|423503033|ref|ZP_17479625.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HD73]
gi|423582489|ref|ZP_17558600.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD014]
gi|423585240|ref|ZP_17561327.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD045]
gi|423634895|ref|ZP_17610548.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD156]
gi|423640639|ref|ZP_17616257.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD166]
gi|423657236|ref|ZP_17632535.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD200]
gi|449091242|ref|YP_007423683.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|50400988|sp|Q818H8.1|ISPG_BACCR RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|254806867|sp|B7HCQ3.1|ISPG_BACC4 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|29897915|gb|AAP11190.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cereus ATCC 14579]
gi|206734032|gb|EDZ51203.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AH1134]
gi|218162652|gb|ACK62644.1| gcpE protein [Bacillus cereus B4264]
gi|228591065|gb|EEK48921.1| hypothetical protein bcere0002_41410 [Bacillus cereus ATCC 10876]
gi|228602980|gb|EEK60459.1| hypothetical protein bcere0005_39010 [Bacillus cereus 172560W]
gi|228631087|gb|EEK87724.1| hypothetical protein bcere0011_40170 [Bacillus cereus m1550]
gi|228636692|gb|EEK93157.1| hypothetical protein bcere0012_40040 [Bacillus cereus BDRD-ST24]
gi|228653873|gb|EEL09741.1| hypothetical protein bcere0015_39990 [Bacillus cereus BDRD-Cer4]
gi|228671746|gb|EEL27042.1| hypothetical protein bcere0018_39970 [Bacillus cereus Rock1-15]
gi|228701743|gb|EEL54231.1| hypothetical protein bcere0023_41710 [Bacillus cereus Rock4-2]
gi|228711376|gb|EEL63336.1| hypothetical protein bcere0025_39500 [Bacillus cereus F65185]
gi|228723453|gb|EEL74822.1| hypothetical protein bcere0027_39710 [Bacillus cereus AH676]
gi|228805219|gb|EEM51813.1| hypothetical protein bthur0006_39320 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228836663|gb|EEM82011.1| hypothetical protein bthur0011_40110 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|296325826|gb|ADH08754.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis BMB171]
gi|363626095|gb|EHL77099.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
7_6_55CFAA_CT2]
gi|401103990|gb|EJQ11967.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG3O-2]
gi|401111161|gb|EJQ19060.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG3X2-2]
gi|401117048|gb|EJQ24886.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG4O-1]
gi|401120882|gb|EJQ28678.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG4X12-1]
gi|401213368|gb|EJR20109.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD014]
gi|401233883|gb|EJR40369.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD045]
gi|401278881|gb|EJR84811.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD156]
gi|401279700|gb|EJR85622.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD166]
gi|401289979|gb|EJR95683.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD200]
gi|402459254|gb|EJV90991.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HD73]
gi|449024999|gb|AGE80162.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar kurstaki str. HD73]
Length = 370
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
>gi|218899445|ref|YP_002447856.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus G9842]
gi|228902802|ref|ZP_04066947.1| hypothetical protein bthur0014_39730 [Bacillus thuringiensis IBL
4222]
gi|228941443|ref|ZP_04103994.1| hypothetical protein bthur0008_40810 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228967344|ref|ZP_04128379.1| hypothetical protein bthur0004_41470 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228974374|ref|ZP_04134943.1| hypothetical protein bthur0003_41280 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228980967|ref|ZP_04141270.1| hypothetical protein bthur0002_41300 [Bacillus thuringiensis Bt407]
gi|384188352|ref|YP_005574248.1| 4-hydroxy-3-methylbut-2-en-1-yldiphosphate synthase [Bacillus
thuringiensis serovar chinensis CT-43]
gi|402564256|ref|YP_006606980.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis HD-771]
gi|410676669|ref|YP_006929040.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG [Bacillus
thuringiensis Bt407]
gi|423358682|ref|ZP_17336185.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD022]
gi|423385782|ref|ZP_17363038.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG1X1-2]
gi|423527861|ref|ZP_17504306.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB1-1]
gi|434377446|ref|YP_006612090.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis HD-789]
gi|452200744|ref|YP_007480825.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|254806865|sp|B7IYD0.1|ISPG_BACC2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|218545235|gb|ACK97629.1| gcpE protein [Bacillus cereus G9842]
gi|228778758|gb|EEM27022.1| hypothetical protein bthur0002_41300 [Bacillus thuringiensis Bt407]
gi|228785424|gb|EEM33434.1| hypothetical protein bthur0003_41280 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228792379|gb|EEM39946.1| hypothetical protein bthur0004_41470 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228818224|gb|EEM64298.1| hypothetical protein bthur0008_40810 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228856811|gb|EEN01326.1| hypothetical protein bthur0014_39730 [Bacillus thuringiensis IBL
4222]
gi|326942061|gb|AEA17957.1| 4-hydroxy-3-methylbut-2-en-1-yldiphosphate synthase [Bacillus
thuringiensis serovar chinensis CT-43]
gi|401084554|gb|EJP92800.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD022]
gi|401635838|gb|EJS53593.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG1X1-2]
gi|401792908|gb|AFQ18947.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis HD-771]
gi|401876003|gb|AFQ28170.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis HD-789]
gi|402451524|gb|EJV83343.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB1-1]
gi|409175798|gb|AFV20103.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG [Bacillus
thuringiensis Bt407]
gi|452106137|gb|AGG03077.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 370
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|291191893|gb|ADD83000.1| PtnM2 [Streptomyces platensis]
Length = 366
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 164/291 (56%), Gaps = 34/291 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RR TR +M+G V +GS HP+ VQ+MTT T D T++++ + G D+VR+ +
Sbjct: 6 LRRPTRQLMLGGVGVGSRHPVSVQSMTTTVTADAQATLQQIAELTAAGCDIVRVACPSRD 65
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+A+A EI QK+ IP++ADIHF P E +RVNPGN
Sbjct: 66 DAEALAEI----AQKS-KIPVIADIHFQPRYVFAAIEAGCAGVRVNPGNI---------- 110
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +++ I + K+ G +RIG N GSL RIM +G +P + ES
Sbjct: 111 ----KEFDDKIKEI-------AQAAKEAGTPIRIGVNAGSLDPRIMRKFGKATPEALAES 159
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K +P+VM++AY LL A+ DYPLHLGVTEAG
Sbjct: 160 ALREAELFAEHDFHDFKISVKHHDPMVMIRAYELLAAQ-----CDYPLHLGVTEAGPAFQ 214
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 371
G +KS++ G LL+ G+GDTIRVSL+ PP +E+ + L +LG+R L+
Sbjct: 215 GTVKSSVAFGALLRQGIGDTIRVSLSAPPVEEVKVGIQILQSLGLRPRRLE 265
>gi|255101264|ref|ZP_05330241.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-63q42]
gi|255307140|ref|ZP_05351311.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile ATCC 43255]
gi|255656106|ref|ZP_05401515.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile QCD-23m63]
gi|296450463|ref|ZP_06892219.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile NAP08]
gi|296879413|ref|ZP_06903407.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile NAP07]
gi|423088618|ref|ZP_17076997.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 70-100-2010]
gi|296260724|gb|EFH07563.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile NAP08]
gi|296429559|gb|EFH15412.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile NAP07]
gi|357559504|gb|EHJ40952.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 70-100-2010]
Length = 351
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG V IG E+PI +Q+MT DT+D T+ ++ R+ + G D+VR+ V +
Sbjct: 5 RRKTREVSVGTVKIGGENPISIQSMTNTDTRDADATIAQIKRLEEAGCDIVRVAVPDIKA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A +IK+S+ NIP++ADIHF +AL E D IR+NPGN
Sbjct: 65 AKNIAKIKSSV-----NIPIIADIHFDYKLALEAIEQGVDGIRINPGNIG---------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
IE V +VEKCK+ +RIG N GSL ++ YG + +VESA
Sbjct: 110 -----------SIERV-KMVVEKCKERNLKIRIGVNGGSLEKELLKKYGSATAEALVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFHN + S+K+S+ V AY L+ ++ DYPLH+G+TE+G G
Sbjct: 158 MGHIKILEDLDFHNIVISLKSSDIYKTVDAYELISKKV-----DYPLHIGITESGSVHKG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL G+GDT+R+SLT P +E+
Sbjct: 213 TIKSSIGVGALLLKGIGDTVRISLTGDPVEEV 244
>gi|126699745|ref|YP_001088642.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 630]
gi|115251182|emb|CAJ69013.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
difficile 630]
Length = 351
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG V IG E+PI +Q+MT DT+D T+ ++ R+ + G D+VR+ V +
Sbjct: 5 RRKTREVSVGTVKIGGENPISIQSMTNTDTRDADATIAQIKRLEEAGCDIVRVAVPDIKA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A +IK+S+ NIP++ADIHF +AL + + D IR+NPGN
Sbjct: 65 AKNIAKIKSSV-----NIPIIADIHFDYKLALEAIKQGVDGIRINPGNIG---------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
IE V +VEKCK+ +RIG N GSL ++ YG + +VESA
Sbjct: 110 -----------SIERV-KMVVEKCKERNLKIRIGVNGGSLEKELLKKYGSATAEALVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFHN + S+K+S+ V AY L+ ++ DYPLH+G+TE+G G
Sbjct: 158 MGHIKILEDLDFHNIVISLKSSDIYKTVDAYELISKKV-----DYPLHIGITESGSVHKG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL G+GDT+R+SLT P +E+
Sbjct: 213 TIKSSIGVGALLLKGIGDTVRISLTGDPVEEV 244
>gi|228910112|ref|ZP_04073932.1| hypothetical protein bthur0013_42610 [Bacillus thuringiensis IBL
200]
gi|228849629|gb|EEM94463.1| hypothetical protein bthur0013_42610 [Bacillus thuringiensis IBL
200]
Length = 368
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
>gi|423395421|ref|ZP_17372622.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG2X1-1]
gi|423406296|ref|ZP_17383445.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG2X1-3]
gi|401654832|gb|EJS72371.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG2X1-1]
gi|401660290|gb|EJS77772.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG2X1-3]
Length = 368
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|411009715|ref|ZP_11386044.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
aquariorum AAK1]
Length = 371
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 162/280 (57%), Gaps = 36/280 (12%)
Query: 79 SIHKT--VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVR 136
S H++ +RRK+R +MVGNV +G + PI VQTMT T DVA TVE++ RI GAD+VR
Sbjct: 2 SAHESPIIRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATVEQIQRIERVGADIVR 61
Query: 137 ITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADR 195
++V A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 62 VSVPTMEAAEAF-----KLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN- 115
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-S 254
EE +V+ + Y +RIG N GSL I YG+ +
Sbjct: 116 ---------------------EERVRAVVDCARHYNIPIRIGVNGGSLERDIQEKYGEPT 154
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
P ++ESA +L+F NF S+KAS+ + V AYRLL ++ + PLHLG+T
Sbjct: 155 PEALLESAMRHVDYLDRLNFDNFKVSVKASDVFLAVGAYRLLAKQI-----EQPLHLGIT 209
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
EAG G +KSAIG+G LL +G+GDT+R+SL P +EI
Sbjct: 210 EAGGFRAGAVKSAIGLGMLLSEGIGDTLRISLAADPVEEI 249
>gi|312110208|ref|YP_003988524.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. Y4.1MC1]
gi|336234672|ref|YP_004587288.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermoglucosidasius C56-YS93]
gi|423719239|ref|ZP_17693421.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermoglucosidans TNO-09.020]
gi|311215309|gb|ADP73913.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. Y4.1MC1]
gi|335361527|gb|AEH47207.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermoglucosidasius C56-YS93]
gi|383368142|gb|EID45417.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermoglucosidans TNO-09.020]
Length = 363
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 164/293 (55%), Gaps = 38/293 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VGN+ IG + + +Q+MTT T DV TV ++ ++ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGNLTIGGNNEVVIQSMTTTKTHDVEATVAQIKQLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGADKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLH+G+TE
Sbjct: 153 DGMVESALYHIRILEELDFHDIIVSLKASDVQLAIEAY-----EKAARTFDYPLHVGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRA 367
+G G +KSA+GIG +L G+G+TIRVSL+ P +E+ R L + G+ A
Sbjct: 208 SGTLFAGTIKSAVGIGAILSKGIGNTIRVSLSADPVEEVKVAREILKSFGLAA 260
>gi|134102436|ref|YP_001108097.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharopolyspora erythraea NRRL 2338]
gi|291004178|ref|ZP_06562151.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharopolyspora erythraea NRRL 2338]
gi|133915059|emb|CAM05172.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharopolyspora erythraea NRRL 2338]
Length = 385
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 174/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GSEHPI VQ+MTT +T D+ T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLKVGPVGVGSEHPISVQSMTTTNTADINATLQQIAELTASGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN +
Sbjct: 78 AEALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAGVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ +G +P + ESA
Sbjct: 123 KFDDQVKE-----------IAQAAKDHGTPIRIGVNAGSLDPRLLKKHGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDIKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +EI + L ++ +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEIKVGAQILQSMNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLADEVTAGLEGMEVPLR 309
>gi|335043887|ref|ZP_08536912.1| enzyme involved in the deoxyxylulose pathway of isoprenoid
biosynthesis [Methylophaga aminisulfidivorans MP]
gi|333787133|gb|EGL53017.1| enzyme involved in the deoxyxylulose pathway of isoprenoid
biosynthesis [Methylophaga aminisulfidivorans MP]
Length = 376
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNVA+G + P+ VQ+MT +T DVA TV ++ + + GAD+VR++V
Sbjct: 11 RRKSRQIMVGNVAVGGDAPVAVQSMTNTETTDVAATVAQIKALQNVGADIVRVSVPTMDA 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + +IPLVADIHF +ALRVAE D +R+NPGN
Sbjct: 71 AEAFGKIK-----QQVSIPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ + +G +RIG N GSL + YG+ +P +VESA
Sbjct: 117 -------------EERVRAVVDSARDHGIPIRIGVNAGSLEKELQKKYGEPTPDALVESA 163
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +L++ +F S+KAS+ + V AYR L ++ + PLHLG+TEAG G
Sbjct: 164 LRHIDILDRLNYPDFKVSLKASDVFMTVHAYRKLAQQI-----EQPLHLGITEAGGLRSG 218
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G LL +G+GDTIRVSL P +EI
Sbjct: 219 SVKSAIGLGMLLSEGIGDTIRVSLAADPVEEI 250
>gi|152990086|ref|YP_001355808.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nitratiruptor
sp. SB155-2]
gi|166217117|sp|A6Q1U2.1|ISPG_NITSB RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|151421947|dbj|BAF69451.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nitratiruptor
sp. SB155-2]
Length = 352
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/315 (40%), Positives = 169/315 (53%), Gaps = 48/315 (15%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R T+ + VG+VA+G + PI VQ+MT + T DV TVE++ R+ GAD+VR+ V + +
Sbjct: 3 RYPTKKIFVGDVAVGGDAPISVQSMTFSKTADVEATVEQINRLHFAGADIVRVAVPEEED 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A EIK K ++PLVADIHF +AL AE D IR+NPGN +
Sbjct: 63 AKALKEIK-----KRTSLPLVADIHFNYRLALIAAEVVDCIRINPGNIGSK--------- 108
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ I+EV V+ CK+ +RIG N GSL I + YG + MV+SA
Sbjct: 109 ---------ERIKEV----VKACKERNIPIRIGVNAGSLEKEIEAKYGATSEAMVQSALY 155
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
++ LDF + SMKAS+ V+AYR L + YP HLGVTEAG +
Sbjct: 156 HIKLLEDLDFTDIKVSMKASDVERTVEAYRKLRPLV-----PYPFHLGVTEAGTVFHATI 210
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAE--------------- 369
KSAIGIG LL +G+GDTIRVS+T EKEI+ R + RA+E
Sbjct: 211 KSAIGIGALLLEGIGDTIRVSITGELEKEIEVGRAIIKDAGRASEGLNIISCPTCGRIEA 270
Query: 370 -LQQGVAPFEEKHRH 383
L + VA EEK +H
Sbjct: 271 DLVKAVAEVEEKTKH 285
>gi|228993022|ref|ZP_04152945.1| hypothetical protein bpmyx0001_37590 [Bacillus pseudomycoides DSM
12442]
gi|228999072|ref|ZP_04158654.1| hypothetical protein bmyco0003_36290 [Bacillus mycoides Rock3-17]
gi|229006620|ref|ZP_04164255.1| hypothetical protein bmyco0002_35220 [Bacillus mycoides Rock1-4]
gi|228754669|gb|EEM04079.1| hypothetical protein bmyco0002_35220 [Bacillus mycoides Rock1-4]
gi|228760689|gb|EEM09653.1| hypothetical protein bmyco0003_36290 [Bacillus mycoides Rock3-17]
gi|228766670|gb|EEM15310.1| hypothetical protein bpmyx0001_37590 [Bacillus pseudomycoides DSM
12442]
Length = 368
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L GLG+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGLGNTLRISLSADPVEEVKVAREL 252
>gi|312139249|ref|YP_004006585.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase ispg
[Rhodococcus equi 103S]
gi|311888588|emb|CBH47900.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG
[Rhodococcus equi 103S]
Length = 387
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 173/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +GS+HP+ VQ+M T T D+ T++++ + G D+VR+ + +
Sbjct: 22 RRKTRQLMVGNVGVGSDHPVSVQSMCTTKTHDINATLQQIAELTASGCDIVRVACPRQED 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA S + K IP++ADIHF P A C +RVNPGN
Sbjct: 82 ADAL-----SAIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 125
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 126 ----KEFDGRVKEVAKAAG-------DAGIPIRIGVNAGSLDPRLMQKYGKATPEALVES 174
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 175 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 229
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G+LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 230 GTIKSAVAFGSLLSEGIGDTIRVSLSAPPAEEIKVGTQILQSLNLRPRKLE--IVSCPSC 287
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 288 GRAQVDVYTLANEVTAGLEGMEVPLR 313
>gi|410663505|ref|YP_006915876.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Simiduia
agarivorans SA1 = DSM 21679]
gi|409025862|gb|AFU98146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Simiduia
agarivorans SA1 = DSM 21679]
Length = 370
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI +Q+MT +T DV TV ++ R+A GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPISIQSMTNTETTDVQATVAQIQRLAQAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A L++K +PLVADIHF +ALRVA+ D +R+NPGN +
Sbjct: 69 AEAF-----GLIRKQSPVPLVADIHFDYRIALRVADLGVDCLRINPGNIGREK------- 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
IE V S K K G +RIG N GSL + YG+ +P +VESA
Sbjct: 117 -----------RIEAVVS----KAKDLGIPIRIGVNAGSLEKDLQKKYGEPTPDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ DF +F S+KAS+ + V AYR L ++ + PLHLG+TEAG G
Sbjct: 162 LRHVEFLDRYDFQDFKVSVKASDVFMAVAAYRKLATQI-----EQPLHLGITEAGGFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDTIRVSL P +E+
Sbjct: 217 TVKSSIGLGLLLMDGIGDTIRVSLAADPVEEV 248
>gi|363890064|ref|ZP_09317410.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium CM5]
gi|361966020|gb|EHL18967.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium CM5]
Length = 348
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/282 (41%), Positives = 158/282 (56%), Gaps = 34/282 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KT V GNV IG +PI +Q+MT T D T+ ++ + G +LVR++V +
Sbjct: 4 RKKTVEVRCGNVKIGGNNPIVIQSMTNTKTSDYTSTINQIHSLEKAGCELVRVSVPDEES 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A S +++N NIPL+ADIHF +AL E D +R+NPGN
Sbjct: 64 AKAI-----SKIRENINIPLIADIHFDYRLALMAIENGVDGLRINPGNIGS--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
DE +E+ V+K K+YG +RIG N GSL I YG +P+ MVESA
Sbjct: 110 ---DERVREV----------VKKAKQYGIKIRIGVNLGSLEKNIQREYGRTPKAMVESAL 156
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
+ K DF+N + S+KAS+ +QAY E + +YPLHLGVTEAG G
Sbjct: 157 YNIELLEKNDFYNTVVSLKASDIKTTIQAY-----EKFSKISNYPLHLGVTEAGTARAGT 211
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KS++GIG LL +G+GDTIRVSLT P +EID + L N+G
Sbjct: 212 VKSSMGIGYLLLNGIGDTIRVSLTADPVEEIDVAKMILQNIG 253
>gi|152986154|ref|YP_001346695.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PA7]
gi|166217121|sp|A6V0W0.1|ISPG_PSEA7 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|150961312|gb|ABR83337.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
aeruginosa PA7]
Length = 371
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 160/281 (56%), Gaps = 37/281 (13%)
Query: 79 SIHKT---VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
SIH RRK+R + VGNV +G + PI VQ+MT +T DVA TV ++ R+ D GAD+V
Sbjct: 2 SIHSASPITRRKSRKIWVGNVPVGGDAPIAVQSMTNTETCDVAATVAQIRRLEDAGADIV 61
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A +IK + N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 62 RVSVPDMDAAEAFGKIK-----QQVNVPLVADIHFDYRIALRVAELGVDCLRINPGNIGR 116
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +V+ ++ +RIG N GSL + YG+
Sbjct: 117 ----------------------EDRVKAVVDAARERNIPIRIGVNAGSLEKDLQKKYGEP 154
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P ++ESA KLDF NF S+KAS+ + V AYRLL ++ + PLHLG+
Sbjct: 155 TPEALLESAMRHVDHLDKLDFQNFKVSVKASDVFMAVAAYRLLARQI-----EQPLHLGI 209
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 210 TEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 250
>gi|387929745|ref|ZP_10132422.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
methanolicus PB1]
gi|387586563|gb|EIJ78887.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
methanolicus PB1]
Length = 369
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 158/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR + VGN+ IG + + +Q+MTT T DV TV E+ R+ D G +VR+
Sbjct: 3 EIIHRT---KTRPIKVGNLTIGGNNELVIQSMTTTKTHDVESTVAEIKRLEDAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+ A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDEIAANAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARTFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVQEVKVAREL 252
>gi|344199657|ref|YP_004783983.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Acidithiobacillus ferrivorans SS3]
gi|343775101|gb|AEM47657.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Acidithiobacillus ferrivorans SS3]
Length = 366
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/272 (43%), Positives = 158/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VGNVAIG + PI VQ+MT +T+DVA TV ++ R+ GAD+VR+++
Sbjct: 9 RRKTRQIHVGNVAIGGDAPISVQSMTNTETRDVAATVAQIRRLEAVGADIVRVSIPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV-AECFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ + PLVADIHF +AL+V A+ D +R+NPGN L+
Sbjct: 69 AEAFKAIRAQV-----ETPLVADIHFDHRIALQVMADGVDGLRINPGNIG-------SLD 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
T +VE K G +RIG N GSL I YG+ + +VESA
Sbjct: 117 KT---------------RLVVEMAKDKGIPIRIGVNAGSLEKDIQEKYGEPTAEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +L+FH+ S+KAS+ + V AYRLL ++ DYPLHLG+TEAG G
Sbjct: 162 LRHVSILDELNFHDVKISVKASDIYLAVSAYRLLSEKV-----DYPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G LL+DG+GDTIR+SL P +EI
Sbjct: 217 TVKSAIGLGLLLRDGIGDTIRISLAADPVEEI 248
>gi|421525815|ref|ZP_15972425.1| GcpE protein [Fusobacterium nucleatum ChDC F128]
gi|402258384|gb|EJU08856.1| GcpE protein [Fusobacterium nucleatum ChDC F128]
Length = 354
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 159/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ RKTR V V N+ IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ +
Sbjct: 1 MERKTRVVKVANLKIGGSNPIIIQSMTNTNSTDVEATVKQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KKVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ YG +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHVRLLEKFEFFDIIISLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKEI 247
>gi|295396365|ref|ZP_06806531.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Brevibacterium mcbrellneri ATCC 49030]
gi|294970805|gb|EFG46714.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Brevibacterium mcbrellneri ATCC 49030]
Length = 381
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 157/272 (57%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS++P+ VQ+MTT T D+ GT++++ + G D+VR+ +
Sbjct: 18 RRKTRQIKVGSVGVGSDYPVSVQSMTTTKTTDINGTLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ QK+ IP++ADIHF P E +RVNPGN +
Sbjct: 78 AEAL----PAIAQKS-QIPVIADIHFQPKYVYAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G ++RIG N GSL RIM +G +P +VESA
Sbjct: 123 KFDDQVKE-----------IAQAAKDHGTSIRIGVNAGSLDKRIMQKFGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K +PV+MV+AYR L D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHDFHDFKISVKHHDPVIMVEAYRQLAER-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL +G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSATAFGALLSEGIGDTIRVSLSAPPVEEV 258
>gi|229086847|ref|ZP_04219009.1| hypothetical protein bcere0022_34240 [Bacillus cereus Rock3-44]
gi|228696491|gb|EEL49314.1| hypothetical protein bcere0022_34240 [Bacillus cereus Rock3-44]
Length = 385
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 21 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 80
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 81 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 133
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 134 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 173
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 174 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASRAFDYPLHLGITESGTLF 228
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 229 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 268
>gi|212638715|ref|YP_002315235.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anoxybacillus
flavithermus WK1]
gi|226722779|sp|B7GH89.1|ISPG_ANOFW RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|212560195|gb|ACJ33250.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
[Anoxybacillus flavithermus WK1]
Length = 364
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 156/285 (54%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VGN+ IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGNITIGGNNEVVIQSMTTTKTHDVDATVAQIHRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRR 196
+R ADA EIK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAADAIAEIK-----KRINIPLVVDIHFDYRLALKAIENGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGVPIRIGVNAGSLEKRILDKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI LDF + + S+KAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIRILEDLDFQDIIVSLKASDVRLAIEAY-----EKAARAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+RVSL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTVRVSLSADPVEEVKVAREL 252
>gi|392403404|ref|YP_006440016.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Turneriella
parva DSM 21527]
gi|390611358|gb|AFM12510.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Turneriella
parva DSM 21527]
Length = 383
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/287 (42%), Positives = 162/287 (56%), Gaps = 35/287 (12%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
K RRKTRTVM+ V IGS HP+ VQ+MT T D TVE+++R + G +VR T
Sbjct: 28 KVERRKTRTVMMAGVPIGSGHPVPVQSMTKTKTADWKSTVEQILRYEEAGCQVVRCTAND 87
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL-RVAECFDKIRVNPGNFADRRAQFE 200
+ A A +IK +N +IPLVADIHF +AL V DKIR+NPGN ++
Sbjct: 88 EDAAHALKKIK-----ENIHIPLVADIHFQHKLALIAVKSGVDKIRINPGNIGNK----- 137
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMV 259
+ S ++ CK G +RIG N GSL IM G + GMV
Sbjct: 138 -----------------DKVSEVLRACKDNGIPIRIGVNAGSLEKDIMRKVGYPTSDGMV 180
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA IC + +F + + S+K+S+ +M++AYR L A++ DYP HLGVTEAG
Sbjct: 181 ESALRHIEICNEHNFDDVIVSLKSSDVFMMMEAYRKL-AKL----CDYPFHLGVTEAGTS 235
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGM 365
G +KS+IGIG LL +G+GDTIRVSLT +E+ R L +LG+
Sbjct: 236 WQGTIKSSIGIGGLLSEGIGDTIRVSLTTDGTEEVKVGREILRSLGL 282
>gi|380293393|gb|AFD50344.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, partial
[Micromeria tenuis]
Length = 106
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 94/106 (88%), Positives = 102/106 (96%)
Query: 392 GQLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVD 451
GQLP+QKEGEEVDYRGVLHRDGSVLMSV+LD LKAPELLYKSLAAKL+VGMPFKDLATVD
Sbjct: 1 GQLPVQKEGEEVDYRGVLHRDGSVLMSVTLDHLKAPELLYKSLAAKLIVGMPFKDLATVD 60
Query: 452 SILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAMV 497
SIL+RELP DD +ARLALKRL+DISMGVITPLSEQLTKPLP+A+V
Sbjct: 61 SILVRELPPQDDKNARLALKRLIDISMGVITPLSEQLTKPLPNALV 106
>gi|433444391|ref|ZP_20409310.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Anoxybacillus
flavithermus TNO-09.006]
gi|432001683|gb|ELK22556.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Anoxybacillus
flavithermus TNO-09.006]
Length = 364
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 156/285 (54%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VGN+ IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGNITIGGNNEVVIQSMTTTKTHDVDATVAQIHRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRR 196
+R ADA EIK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAADAIAEIK-----KRINIPLVVDIHFDYRLALKAIENGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGVPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI LDF + + S+KAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIRILEDLDFQDIIVSLKASDVRLAIEAY-----EKAARAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+RVSL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTVRVSLSADPVEEVKVAREL 252
>gi|326333628|ref|ZP_08199865.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Nocardioidaceae bacterium Broad-1]
gi|325948534|gb|EGD40637.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Nocardioidaceae bacterium Broad-1]
Length = 384
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GSE PI VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQIKVGSVGVGSESPISVQSMTTTLTSDVNSTLQQIAELTASGCDIVRVACPSQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA I K IP++ADIHF P E +RVNPGN +
Sbjct: 79 ADALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G ++RIG N GSL R++ YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IAAAAKDHGTSIRIGVNAGSLDKRLLEKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PVVMV+AY LL D+PLHLGVTEAG G
Sbjct: 173 IWEASLFEEHGFHDFKISVKHNDPVVMVRAYELLA-----ESGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++ G+LL G+GDTIRVSL+ PP +E+
Sbjct: 228 TIKSSVAFGSLLSKGIGDTIRVSLSAPPVEEV 259
>gi|218288358|ref|ZP_03492648.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alicyclobacillus acidocaldarius LAA1]
gi|218241331|gb|EED08505.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alicyclobacillus acidocaldarius LAA1]
Length = 361
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 162/278 (58%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +T+ V VG+V IG + + VQ+MTT T DV TVE++ R+ D G +VR+TV +
Sbjct: 4 RWETKPVRVGDVVIGGSNQVIVQSMTTTKTADVKATVEQIHRLEDAGCQVVRVTVNNREA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK + +IPLVADIHF +AL + DK+R+NPGN R
Sbjct: 64 AEAIKEIK-----RQIHIPLVADIHFDHRLALEAIKNGVDKVRINPGNIGKR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+ +EEV V+ CK+ G +RIG N GSL I+ YG + GM+ESA
Sbjct: 111 ----------EKVEEV----VKACKERGIPIRIGVNAGSLEKHILEKYGYPTAEGMLESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I +LDF + + SMKAS+ + ++AYR L AE + YPLHLG+TE+G G
Sbjct: 157 EHHVKILEELDFDDIVISMKASDVPLAIEAYR-LAAERF----RYPLHLGITESGTLFGG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+GTLL G+G+TIRVSL+ P +E+ R L
Sbjct: 212 TIKSAAGLGTLLHMGIGNTIRVSLSADPVEEVKVAREL 249
>gi|261417673|ref|YP_003251355.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
sp. Y412MC61]
gi|297529368|ref|YP_003670643.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. C56-T3]
gi|319767521|ref|YP_004133022.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. Y412MC52]
gi|261374130|gb|ACX76873.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. Y412MC61]
gi|297252620|gb|ADI26066.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. C56-T3]
gi|317112387|gb|ADU94879.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. Y412MC52]
Length = 374
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 159/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VG + IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGPLTIGGSNEVIIQSMTTTKTHDVEATVAQIHRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAAEAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGVPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLH+G+TE
Sbjct: 153 DGMVESALYHIRILEELDFHDIIVSLKASDVRLAIEAY-----EKAARTFDYPLHVGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
AG G +KSA+G+G +L G+G+TIRVSL+ P +E+ R +
Sbjct: 208 AGTLFSGTIKSAVGLGAILSKGIGNTIRVSLSADPVEEVKVAREI 252
>gi|410455470|ref|ZP_11309349.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
bataviensis LMG 21833]
gi|409929164|gb|EKN66251.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
bataviensis LMG 21833]
Length = 369
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR + VGN+ IG + I +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPIKVGNLTIGGSNEIIIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAIPEIK-----KRINIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL +I+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKKILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIQILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G ++ G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFSGTVKSAAGLGAIISKGIGNTLRISLSADPVEEVKVAREL 252
>gi|75762216|ref|ZP_00742109.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74490301|gb|EAO53624.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 342
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAADAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|410461825|ref|ZP_11315464.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
azotoformans LMG 9581]
gi|409925157|gb|EKN62382.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
azotoformans LMG 9581]
Length = 362
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR + VGN+ IG + + +Q+MTT T DV TV ++ R+ + G +VR+ +
Sbjct: 5 THRTKTRPIKVGNLTIGGNNEVVIQSMTTTKTHDVDATVAQINRLEEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
+ A+A EIK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 KAANAIAEIK-----KRINIPLVVDIHFDYRLALKAIEGGADKIRINPGNIGKR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGVPIRIGVNAGSLEKRILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFHN + S+KAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHNIIVSLKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+TIR+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTIRISLSADPVEEVKVAREL 252
>gi|225791081|gb|ACO31285.1| PtmM2 [Streptomyces platensis]
Length = 366
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 164/291 (56%), Gaps = 34/291 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RR TR +M+G V +GS HP+ VQ+MTT T D T++++ + G D+VR+ +
Sbjct: 6 LRRPTRQLMLGGVGVGSRHPVSVQSMTTTVTADAQATLQQIAELTAAGCDIVRVACPSRD 65
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+A+A EI QK+ IP++ADIHF P E +RVNPGN
Sbjct: 66 DAEALAEI----AQKS-KIPVIADIHFQPRYVFAAIEAGCAGVRVNPGNI---------- 110
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +++ I + K+ G +RIG N GSL RI+ +G +P + ES
Sbjct: 111 ----KEFDDKIKEI-------AQAAKETGTPIRIGVNAGSLDPRILRKFGKATPEALAES 159
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K +P+VM++AY LL A+ DYPLHLGVTEAG
Sbjct: 160 ALREAELFAEHDFHDFKISVKHHDPMVMIRAYELLAAQ-----CDYPLHLGVTEAGPAFQ 214
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 371
G +KS++ G LL+ G+GDTIRVSL+ PP +E+ + L +LG+R L+
Sbjct: 215 GTVKSSVAFGALLRQGIGDTIRVSLSAPPVEEVKVGIQILQSLGLRPRRLE 265
>gi|448238745|ref|YP_007402803.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
sp. GHH01]
gi|445207587|gb|AGE23052.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
sp. GHH01]
Length = 374
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 159/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VG + IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGPLTIGGSNEVIIQSMTTTKTHDVEATVAQIHRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAAEAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGVPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLH+G+TE
Sbjct: 153 DGMVESALYHIRILEELDFHDIIVSLKASDVRLAIEAY-----EKAARTFDYPLHVGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
AG G +KSA+G+G +L G+G+TIRVSL+ P +E+ R +
Sbjct: 208 AGTLFSGTIKSAVGLGAILSKGIGNTIRVSLSADPVEEVKVAREI 252
>gi|56421001|ref|YP_148319.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
kaustophilus HTA426]
gi|375009551|ref|YP_004983184.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|73621094|sp|Q5KX35.1|ISPG_GEOKA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|56380843|dbj|BAD76751.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus kaustophilus HTA426]
gi|359288400|gb|AEV20084.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 374
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 159/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VG + IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGPLTIGGSNEVIIQSMTTTKTHDVEATVAQIHRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAAEAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGVPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLH+G+TE
Sbjct: 153 DGMVESALYHIRILEELDFHDIIVSLKASDVRLAIEAY-----EKAARTFDYPLHVGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
AG G +KSA+G+G +L G+G+TIRVSL+ P +E+ R +
Sbjct: 208 AGTLFSGTIKSAVGLGAILSKGIGNTIRVSLSADPVEEVKVAREI 252
>gi|423206311|ref|ZP_17192867.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AMC34]
gi|404621863|gb|EKB18728.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AMC34]
Length = 371
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 157/273 (57%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRK+R +MVGNV +G + PI VQTMT T DVA TVE++ RI GAD+VR++V
Sbjct: 9 IRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATVEQIQRIERVGADIVRVSVPTME 68
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 69 AAEAF-----RLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN-------- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+ + +RIG N GSL I YG+ +P +VES
Sbjct: 116 --------------EQRVRSVVDCARDLNIPIRIGVNGGSLEKDIQEKYGEPTPEALVES 161
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A +LDF +F S+KAS+ + V AYRLL ++ + PLHLG+TEAG
Sbjct: 162 AMRHVEYLDRLDFQDFKVSVKASDVFLAVGAYRLLAKQI-----EQPLHLGITEAGGFRA 216
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSAIG+G LL DG+GDT+R+SL P +E+
Sbjct: 217 GAVKSAIGLGMLLTDGIGDTLRISLAADPVEEV 249
>gi|423518981|ref|ZP_17495462.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuA2-4]
gi|423673929|ref|ZP_17648868.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VDM062]
gi|401160036|gb|EJQ67415.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuA2-4]
gi|401310295|gb|EJS15620.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VDM062]
Length = 368
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|340354634|ref|ZP_08677336.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Sporosarcina
newyorkensis 2681]
gi|339623157|gb|EGQ27662.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Sporosarcina
newyorkensis 2681]
Length = 386
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 162/293 (55%), Gaps = 37/293 (12%)
Query: 70 LVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD 129
L R+ E IH R TR V VGN+ IG + + +Q+MTT T DV TV E+ R+ +
Sbjct: 7 LKERKAMTEMIH---RANTRPVKVGNLTIGGSNELFIQSMTTTKTHDVEATVAEINRLEE 63
Query: 130 QGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVAL-RVAECFDKIRVN 188
G +VR+ +R A + EIK K NIPLV DIHF +AL + + DKIR+N
Sbjct: 64 AGCQIVRVACPDERAAYSIGEIK-----KRINIPLVVDIHFDYKLALIAIEQGADKIRIN 118
Query: 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248
PGN R+++ E +V K G +RIG N GSL +I+
Sbjct: 119 PGNIG-RQSKVE---------------------AVVNAAKAKGIPIRIGVNAGSLEKKIL 156
Query: 249 SYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
YG + GMVESA +I LDFH+ + S+KAS+ + ++AY+L A +DY
Sbjct: 157 EKYGYPTAEGMVESALHHIKILEDLDFHDIIVSLKASDVNLAIEAYKLAAA-----AFDY 211
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
PLHLG+TE+G G +KSA G+GTLL G+G+T+RVSL+ P +EI R L
Sbjct: 212 PLHLGITESGTLFAGSIKSAAGLGTLLSAGIGNTMRVSLSADPVQEIKVAREL 264
>gi|49187177|ref|YP_030429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. Sterne]
gi|49481588|ref|YP_038337.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|65321654|ref|ZP_00394613.1| COG0821: Enzyme involved in the deoxyxylulose pathway of isoprenoid
biosynthesis [Bacillus anthracis str. A2012]
gi|118479451|ref|YP_896602.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis str. Al Hakam]
gi|165872042|ref|ZP_02216682.1| gcpE protein [Bacillus anthracis str. A0488]
gi|167634574|ref|ZP_02392894.1| gcpE protein [Bacillus anthracis str. A0442]
gi|167638524|ref|ZP_02396800.1| gcpE protein [Bacillus anthracis str. A0193]
gi|170687462|ref|ZP_02878679.1| gcpE protein [Bacillus anthracis str. A0465]
gi|170707407|ref|ZP_02897861.1| gcpE protein [Bacillus anthracis str. A0389]
gi|177655049|ref|ZP_02936715.1| gcpE protein [Bacillus anthracis str. A0174]
gi|190566052|ref|ZP_03018971.1| gcpE protein [Bacillus anthracis str. Tsiankovskii-I]
gi|196034828|ref|ZP_03102235.1| gcpE protein [Bacillus cereus W]
gi|218905415|ref|YP_002453249.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AH820]
gi|225866260|ref|YP_002751638.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus 03BB102]
gi|227817054|ref|YP_002817063.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. CDC 684]
gi|228916911|ref|ZP_04080473.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228929322|ref|ZP_04092347.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228935598|ref|ZP_04098413.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228947992|ref|ZP_04110278.1| hypothetical protein bthur0007_41190 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228987528|ref|ZP_04147647.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229123817|ref|ZP_04253011.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus 95/8201]
gi|229186519|ref|ZP_04313681.1| hypothetical protein bcere0004_40630 [Bacillus cereus BGSC 6E1]
gi|229604914|ref|YP_002868568.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. A0248]
gi|254684037|ref|ZP_05147897.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. CNEVA-9066]
gi|254721871|ref|ZP_05183660.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. A1055]
gi|254736386|ref|ZP_05194092.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. Western North America USA6153]
gi|254741423|ref|ZP_05199110.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. Kruger B]
gi|254753940|ref|ZP_05205975.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. Vollum]
gi|254757812|ref|ZP_05209839.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. Australia 94]
gi|376268176|ref|YP_005120888.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cereus F837/76]
gi|386738168|ref|YP_006211349.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. H9401]
gi|421506534|ref|ZP_15953457.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. UR-1]
gi|421638357|ref|ZP_16078953.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. BF1]
gi|73621079|sp|Q6HDN9.1|ISPG_BACHK RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|166216866|sp|A0RIQ2.1|ISPG_BACAH RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|226722780|sp|B7JN03.1|ISPG_BACC0 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|254806863|sp|C3P8I5.1|ISPG_BACAA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|254806864|sp|C3LKV7.1|ISPG_BACAC RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|254806866|sp|C1ES01.1|ISPG_BACC3 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|49181104|gb|AAT56480.1| gcpE protein [Bacillus anthracis str. Sterne]
gi|49333144|gb|AAT63790.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|118418676|gb|ABK87095.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis str. Al Hakam]
gi|164712173|gb|EDR17710.1| gcpE protein [Bacillus anthracis str. A0488]
gi|167513372|gb|EDR88742.1| gcpE protein [Bacillus anthracis str. A0193]
gi|167530026|gb|EDR92761.1| gcpE protein [Bacillus anthracis str. A0442]
gi|170127651|gb|EDS96524.1| gcpE protein [Bacillus anthracis str. A0389]
gi|170668657|gb|EDT19403.1| gcpE protein [Bacillus anthracis str. A0465]
gi|172080310|gb|EDT65399.1| gcpE protein [Bacillus anthracis str. A0174]
gi|190562971|gb|EDV16937.1| gcpE protein [Bacillus anthracis str. Tsiankovskii-I]
gi|195992367|gb|EDX56328.1| gcpE protein [Bacillus cereus W]
gi|218535321|gb|ACK87719.1| gcpE protein [Bacillus cereus AH820]
gi|225787003|gb|ACO27220.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus 03BB102]
gi|227007253|gb|ACP16996.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. CDC 684]
gi|228596950|gb|EEK54608.1| hypothetical protein bcere0004_40630 [Bacillus cereus BGSC 6E1]
gi|228659638|gb|EEL15284.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus 95/8201]
gi|228772260|gb|EEM20707.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228811682|gb|EEM58017.1| hypothetical protein bthur0007_41190 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228824038|gb|EEM69855.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228830336|gb|EEM75948.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228842735|gb|EEM87821.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|229269322|gb|ACQ50959.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. A0248]
gi|364513976|gb|AEW57375.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cereus F837/76]
gi|384388020|gb|AFH85681.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. H9401]
gi|401823527|gb|EJT22674.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. UR-1]
gi|403394783|gb|EJY92023.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. BF1]
Length = 370
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
>gi|229098751|ref|ZP_04229689.1| hypothetical protein bcere0020_39770 [Bacillus cereus Rock3-29]
gi|407706806|ref|YP_006830391.1| hypothetical protein MC28_3570 [Bacillus thuringiensis MC28]
gi|423440970|ref|ZP_17417876.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG4X2-1]
gi|423448862|ref|ZP_17425741.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG5O-1]
gi|423464035|ref|ZP_17440803.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6O-1]
gi|423533398|ref|ZP_17509816.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB2-9]
gi|423541347|ref|ZP_17517738.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB4-10]
gi|423615378|ref|ZP_17591212.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD115]
gi|228684595|gb|EEL38535.1| hypothetical protein bcere0020_39770 [Bacillus cereus Rock3-29]
gi|401129456|gb|EJQ37139.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG5O-1]
gi|401172535|gb|EJQ79756.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB4-10]
gi|401261057|gb|EJR67224.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD115]
gi|402417631|gb|EJV49931.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG4X2-1]
gi|402420302|gb|EJV52573.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6O-1]
gi|402463617|gb|EJV95317.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB2-9]
gi|407384491|gb|AFU14992.1| gcpE protein [Bacillus thuringiensis MC28]
Length = 370
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|394987685|ref|ZP_10380524.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Sulfuricella
denitrificans skB26]
gi|393792904|dbj|GAB70163.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Sulfuricella
denitrificans skB26]
Length = 363
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVG+VA+G + PI VQTMT +T DV T+ ++ R A G D+VR++V
Sbjct: 8 RRKSRKIMVGSVAVGGDAPISVQTMTNTETCDVEATLAQIDRAARAGVDIVRVSVPSMEA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A EIK K +PL+ DIHF +ALRVAE D +R+NPGN
Sbjct: 68 AEAFGEIK-----KRSQVPLITDIHFDYKIALRVAELGADCLRINPGNIGR--------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ K +G ++RIG N GSL + YG+ +P +VESA
Sbjct: 114 -------------EDRVQAVVQSAKDHGISIRIGVNAGSLEKDLQKKYGEPTPEALVESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +L+F +F S+KAS+ V+AY++L A++ + PLHLG+TEAG G
Sbjct: 161 MRHIEILDRLNFPDFKVSLKASDVFTTVEAYKILAAQI-----EQPLHLGITEAGGLRSG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G LL G+GDTIRVSL P +E+
Sbjct: 216 SVKSAIGLGMLLAAGIGDTIRVSLAADPVEEV 247
>gi|152976711|ref|YP_001376228.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cytotoxicus NVH 391-98]
gi|189045581|sp|A7GSX5.1|ISPG_BACCN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|152025463|gb|ABS23233.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cytotoxicus NVH 391-98]
Length = 368
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|206978021|ref|ZP_03238907.1| gcpE protein [Bacillus cereus H3081.97]
gi|217961769|ref|YP_002340339.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AH187]
gi|229141015|ref|ZP_04269558.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BDRD-ST26]
gi|384182100|ref|YP_005567862.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|402555585|ref|YP_006596856.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus FRI-35]
gi|423373842|ref|ZP_17351181.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AND1407]
gi|423570521|ref|ZP_17546766.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MSX-A12]
gi|423574039|ref|ZP_17550158.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MSX-D12]
gi|423604069|ref|ZP_17579962.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD102]
gi|226722781|sp|B7HPH8.1|ISPG_BACC7 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|206743821|gb|EDZ55242.1| gcpE protein [Bacillus cereus H3081.97]
gi|217065837|gb|ACJ80087.1| gcpE protein [Bacillus cereus AH187]
gi|228642448|gb|EEK98736.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BDRD-ST26]
gi|324328184|gb|ADY23444.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|401095243|gb|EJQ03303.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AND1407]
gi|401203717|gb|EJR10552.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MSX-A12]
gi|401212608|gb|EJR19351.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MSX-D12]
gi|401245755|gb|EJR52108.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD102]
gi|401796795|gb|AFQ10654.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus FRI-35]
Length = 370
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|384134689|ref|YP_005517403.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339288774|gb|AEJ42884.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 361
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 161/278 (57%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +T+ V VG+V IG + + VQ+MTT T DV TVE++ R+ D G +VR+TV +
Sbjct: 4 RWETKPVRVGDVVIGGSNQVIVQSMTTTKTADVKATVEQIHRLEDAGCQVVRVTVNNREA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK + +IPLVADIHF +AL + DK+R+NPGN R
Sbjct: 64 AEAIKEIK-----RQIHIPLVADIHFDHRLALEAIKNGVDKVRINPGNIGKR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+ +EEV V+ CK+ G +RIG N GSL I+ YG + GM+ESA
Sbjct: 111 ----------EKVEEV----VKACKERGIPIRIGVNAGSLEKHILEKYGYPTAEGMLESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDF + + SMKAS+ + ++AYR L AE + YPLHLG+TE+G G
Sbjct: 157 EHHVKILEDLDFDDIIISMKASDVPLAIEAYR-LAAERF----RYPLHLGITESGTLFGG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+GTLL G+G+TIRVSL+ P +E+ R L
Sbjct: 212 TIKSAAGLGTLLHMGIGNTIRVSLSADPVEEVKVAREL 249
>gi|229104909|ref|ZP_04235566.1| hypothetical protein bcere0019_40470 [Bacillus cereus Rock3-28]
gi|228678483|gb|EEL32703.1| hypothetical protein bcere0019_40470 [Bacillus cereus Rock3-28]
Length = 372
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|163942037|ref|YP_001646921.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
weihenstephanensis KBAB4]
gi|229485805|sp|A9VH61.1|ISPG_BACWK RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|163864234|gb|ABY45293.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
weihenstephanensis KBAB4]
Length = 365
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 2 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 61
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 62 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 114
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 115 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 154
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 155 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 209
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 210 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 249
>gi|423612492|ref|ZP_17588353.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD107]
gi|401246081|gb|EJR52433.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD107]
Length = 370
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|423483864|ref|ZP_17460554.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6X1-2]
gi|401141415|gb|EJQ48970.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6X1-2]
Length = 372
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|393200305|ref|YP_006462147.1| hypothetical protein SSIL_1578 [Solibacillus silvestris StLB046]
gi|406668045|ref|ZP_11075793.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
isronensis B3W22]
gi|327439636|dbj|BAK16001.1| enzyme [Solibacillus silvestris StLB046]
gi|405384156|gb|EKB43607.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
isronensis B3W22]
Length = 369
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 156/285 (54%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E +H+T KTR V VGN+ IG + + +Q+M T T DV TV E+ R+ + G +VRI
Sbjct: 3 EIVHRT---KTRPVRVGNLTIGGNNEVVIQSMCTTKTHDVEATVAEIKRLEEAGCQIVRI 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRR 196
V +R A+A EIK K NIPLVADIHF +AL+ E DK+R+NPGN R
Sbjct: 60 AVPDERAANAIPEIK-----KQINIPLVADIHFDYKLALKAIEGGIDKVRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V K G +RIG N GSL I+ YG +
Sbjct: 114 ---------------------EKVEAVVNAAKAKGIPIRIGVNAGSLERHILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E ++YPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAQAFNYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +EI R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEIKVAREL 252
>gi|196041627|ref|ZP_03108919.1| gcpE protein [Bacillus cereus NVH0597-99]
gi|229093348|ref|ZP_04224456.1| hypothetical protein bcere0021_40740 [Bacillus cereus Rock3-42]
gi|229157892|ref|ZP_04285966.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus ATCC 4342]
gi|423549977|ref|ZP_17526304.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus ISP3191]
gi|196027615|gb|EDX66230.1| gcpE protein [Bacillus cereus NVH0597-99]
gi|228625551|gb|EEK82304.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus ATCC 4342]
gi|228690034|gb|EEL43834.1| hypothetical protein bcere0021_40740 [Bacillus cereus Rock3-42]
gi|401189593|gb|EJQ96643.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus ISP3191]
Length = 368
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
>gi|423521860|ref|ZP_17498333.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuA4-10]
gi|401176522|gb|EJQ83717.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuA4-10]
Length = 372
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|423368332|ref|ZP_17345764.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD142]
gi|423452416|ref|ZP_17429269.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG5X1-1]
gi|423660874|ref|ZP_17636043.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VDM022]
gi|401080931|gb|EJP89212.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD142]
gi|401140054|gb|EJQ47611.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG5X1-1]
gi|401300915|gb|EJS06504.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VDM022]
Length = 372
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|325673446|ref|ZP_08153137.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
equi ATCC 33707]
gi|325555467|gb|EGD25138.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
equi ATCC 33707]
Length = 387
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 173/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +GS+HP+ VQ+M T T D+ T++++ + G D+VR+ + +
Sbjct: 22 RRKTRQLMVGNVGVGSDHPVSVQSMCTTKTHDINATLQQIAELTASGCDIVRVACPRQED 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + K IP++ADIHF P A C +RVNPGN
Sbjct: 82 ADAL-----AAIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 125
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 126 ----KEFDGRVKEVAKAAG-------DAGIPIRIGVNAGSLDPRLMQKYGKATPEALVES 174
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 175 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 229
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G+LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 230 GTIKSAVAFGSLLSEGIGDTIRVSLSAPPAEEIKVGTQILQSLNLRPRKLE--IVSCPSC 287
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 288 GRAQVDVYTLANEVTAGLEGMEVPLR 313
>gi|383809973|ref|ZP_09965485.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia aeria
F0474]
gi|383447293|gb|EID50278.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia aeria
F0474]
Length = 389
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 161/293 (54%), Gaps = 38/293 (12%)
Query: 64 SEGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEE 123
S G P+L P + RRKTR VG V IGSE P+ VQ+MTT T D+ T+++
Sbjct: 4 SLGMPVLKPAPQVLAP-----RRKTRQFKVGTVGIGSESPVSVQSMTTTKTHDIGSTLQQ 58
Query: 124 VMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECF 182
+ + G D+VR+ ++A+A ++ K NIP++ADIHF P V +
Sbjct: 59 IAELTAAGCDIVRVACPTDKDAEAL-----PIIAKQSNIPVIADIHFQPKYVYAAIKAGC 113
Query: 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
+RVNPGN + DD+ ++ + E +G ++RIG N GS
Sbjct: 114 GAVRVNPGN----------IRKFDDQVKE-----------IAEMASDHGTSIRIGVNAGS 152
Query: 243 LSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMY 301
L R++ YG +P +VESA A + + F +F S+K ++PV+MV+AYR L A
Sbjct: 153 LDKRLLEKYGKATPEALVESAVWEASLFEEHGFRDFKISVKHNDPVIMVEAYRQLAAS-- 210
Query: 302 VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
D+PLHLGVTEAG G +KS++ GTLL G+GDTIRVSL+ PP +E+
Sbjct: 211 ---GDWPLHLGVTEAGPAFQGTIKSSVAFGTLLSQGIGDTIRVSLSAPPVEEV 260
>gi|196046334|ref|ZP_03113560.1| gcpE protein [Bacillus cereus 03BB108]
gi|196022804|gb|EDX61485.1| gcpE protein [Bacillus cereus 03BB108]
Length = 372
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
>gi|423512395|ref|ZP_17488926.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuA2-1]
gi|402449366|gb|EJV81203.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuA2-1]
Length = 370
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|423389402|ref|ZP_17366628.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG1X1-3]
gi|423417794|ref|ZP_17394883.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG3X2-1]
gi|401106965|gb|EJQ14922.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG3X2-1]
gi|401641493|gb|EJS59210.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG1X1-3]
Length = 370
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
>gi|229061974|ref|ZP_04199300.1| hypothetical protein bcere0026_40470 [Bacillus cereus AH603]
gi|228717283|gb|EEL68956.1| hypothetical protein bcere0026_40470 [Bacillus cereus AH603]
Length = 372
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|229135105|ref|ZP_04263907.1| hypothetical protein bcere0014_40080 [Bacillus cereus BDRD-ST196]
gi|229169028|ref|ZP_04296744.1| hypothetical protein bcere0007_39800 [Bacillus cereus AH621]
gi|423470497|ref|ZP_17447241.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6O-2]
gi|423558136|ref|ZP_17534438.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MC67]
gi|423591723|ref|ZP_17567754.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD048]
gi|423598402|ref|ZP_17574402.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD078]
gi|423669865|ref|ZP_17644894.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VDM034]
gi|228614437|gb|EEK71546.1| hypothetical protein bcere0007_39800 [Bacillus cereus AH621]
gi|228648334|gb|EEL04367.1| hypothetical protein bcere0014_40080 [Bacillus cereus BDRD-ST196]
gi|401191404|gb|EJQ98426.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MC67]
gi|401231856|gb|EJR38358.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD048]
gi|401236672|gb|EJR43129.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD078]
gi|401298992|gb|EJS04592.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VDM034]
gi|402436163|gb|EJV68195.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6O-2]
Length = 370
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|52141219|ref|YP_085608.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus E33L]
gi|73621076|sp|Q634Q9.1|ISPG_BACCZ RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|51974688|gb|AAU16238.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus cereus E33L]
Length = 378
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
>gi|258510916|ref|YP_003184350.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257477642|gb|ACV57961.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 361
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 161/278 (57%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +T+ V VG+V IG + + VQ+MTT T DV TVE++ R+ D G +VR+TV +
Sbjct: 4 RWETKPVRVGDVVIGGSNQVIVQSMTTTKTADVKATVEQIHRLEDAGCQVVRVTVNNREA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK + +IPLVADIHF +AL + DK+R+NPGN R
Sbjct: 64 AEAIKEIK-----RQIHIPLVADIHFDHRLALEAIKNGVDKVRINPGNIGKR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+ +EEV V+ CK+ G +RIG N GSL I+ YG + GM+ESA
Sbjct: 111 ----------EKVEEV----VKACKERGIPIRIGVNAGSLEKHILEKYGYPTAEGMLESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDF + + SMKAS+ + ++AYR L AE + YPLHLG+TE+G G
Sbjct: 157 EHHVKILEDLDFDDIVISMKASDVPLAIEAYR-LAAERF----RYPLHLGITESGTLFGG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+GTLL G+G+TIRVSL+ P +E+ R L
Sbjct: 212 TIKSAAGLGTLLHMGIGNTIRVSLSADPVEEVKVAREL 249
>gi|30264350|ref|NP_846727.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. Ames]
gi|47529797|ref|YP_021146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
anthracis str. 'Ames Ancestor']
gi|47567840|ref|ZP_00238548.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cereus G9241]
gi|50400990|sp|Q81LV7.1|ISPG_BACAN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|30259008|gb|AAP28213.1| (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [Bacillus
anthracis str. Ames]
gi|47504945|gb|AAT33621.1| gcpE protein [Bacillus anthracis str. 'Ames Ancestor']
gi|47555517|gb|EAL13860.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cereus G9241]
Length = 367
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 2 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 61
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 62 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 114
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 115 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 154
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 155 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 209
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 210 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 249
>gi|229198405|ref|ZP_04325111.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus m1293]
gi|228585105|gb|EEK43217.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus m1293]
Length = 372
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|409385673|ref|ZP_11238232.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Lactococcus raffinolactis 4877]
gi|399206964|emb|CCK19147.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Lactococcus raffinolactis 4877]
Length = 378
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/286 (42%), Positives = 163/286 (56%), Gaps = 42/286 (14%)
Query: 83 TVRRKTRTVMVGN----VAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT 138
T RRKTR V VG+ V IG + + +Q+M T T+DVA TVE++ ++ + G LVR+
Sbjct: 4 THRRKTRAVKVGDGPNAVIIGGRNKVILQSMCTTKTQDVAATVEQINQLEEAGCQLVRVA 63
Query: 139 VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFA--DR 195
V A A EIK + NIPLVADIHF +AL+ E DKIR+NPGN DR
Sbjct: 64 VPDMEAAIAIKEIKAQI-----NIPLVADIHFDYRLALQAIESGVDKIRINPGNIGRKDR 118
Query: 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DS 254
A+ +VE CK + +RIG N GSL + + YG +
Sbjct: 119 VAK------------------------VVEACKAHNIPIRIGVNAGSLEKKFLQKYGYPT 154
Query: 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314
+GM+ESA E I +LDFH+ + SMKASN + ++AY+L AE + DYPLHLG+T
Sbjct: 155 AQGMLESAIEHVEILEELDFHDIIISMKASNVELALEAYKL-AAERF----DYPLHLGIT 209
Query: 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
EAG G +KSA G+G LL G+GDT+R+SL+ P +EI R +
Sbjct: 210 EAGPLFSGSVKSAAGMGALLSLGIGDTMRISLSADPREEIKVGREV 255
>gi|229019503|ref|ZP_04176320.1| hypothetical protein bcere0030_40060 [Bacillus cereus AH1273]
gi|229025745|ref|ZP_04182146.1| hypothetical protein bcere0029_40360 [Bacillus cereus AH1272]
gi|229031927|ref|ZP_04187914.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AH1271]
gi|423400872|ref|ZP_17378045.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG2X1-2]
gi|423457470|ref|ZP_17434267.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG5X2-1]
gi|228729391|gb|EEL80381.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus AH1271]
gi|228735545|gb|EEL86139.1| hypothetical protein bcere0029_40360 [Bacillus cereus AH1272]
gi|228741759|gb|EEL91942.1| hypothetical protein bcere0030_40060 [Bacillus cereus AH1273]
gi|401147854|gb|EJQ55347.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG5X2-1]
gi|401653862|gb|EJS71405.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG2X1-2]
Length = 372
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
>gi|229174952|ref|ZP_04302472.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MM3]
gi|228608620|gb|EEK65922.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus MM3]
Length = 374
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
>gi|325001857|ref|ZP_08122969.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudonocardia sp. P1]
Length = 385
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 165/290 (56%), Gaps = 34/290 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGPVGVGSDHPISVQSMTTTLTSDVNATLQQIAELTASGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ QK+ IP++ADIHF P E +RVNPGN +
Sbjct: 78 AEAL----PAIAQKS-QIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ KE+ H + +G +RIG N GSL R+M +G +P + ESA
Sbjct: 123 KFDDQV-KEIAH----------AARDHGTPIRIGVNAGSLDKRLMEKHGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY LL + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDIKISVKHNDPVVMVRAYELLAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA+ G LL+ G+GDTIRVSL+ PP +EI ++ L +L +R +L+
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEIKVGQQILESLNLRPRKLE 276
>gi|229163223|ref|ZP_04291178.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus R309803]
gi|228620286|gb|EEK77157.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus R309803]
Length = 376
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|301055772|ref|YP_003793983.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus biovar anthracis str. CI]
gi|300377941|gb|ADK06845.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus biovar anthracis str. CI]
Length = 365
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 2 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 61
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 62 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 114
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 115 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 154
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 155 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 209
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 210 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 249
>gi|330504679|ref|YP_004381548.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mendocina NK-01]
gi|328918965|gb|AEB59796.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mendocina NK-01]
Length = 370
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 161/281 (57%), Gaps = 36/281 (12%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
+CES K RR +R + VG+V +G + PI VQ+MT DT DVA TV ++ R+ D GAD+V
Sbjct: 2 HCESPIK--RRLSRKIWVGSVPVGGDAPIAVQSMTNTDTNDVAATVAQIRRLEDAGADIV 59
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A L+++ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 60 RVSVPDMEAAEAF-----GLIKQQVRVPLVADIHFDYQIALRVAELGVDCLRINPGNIGR 114
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +VE + G +RIG N GSL + YG+
Sbjct: 115 ----------------------EDRVKAVVEAARDKGIPIRIGVNAGSLEKDLQKKYGEP 152
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P +VESA +L+F +F S+KAS+ + V+AYRLL ++ + PLHLG+
Sbjct: 153 TPEALVESALRHVEHLDRLNFPDFKVSVKASDVFMAVEAYRLLAKQI-----EQPLHLGI 207
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 208 TEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 248
>gi|42783404|ref|NP_980651.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus ATCC 10987]
gi|222097723|ref|YP_002531780.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus Q1]
gi|375286285|ref|YP_005106724.1| gcpE protein [Bacillus cereus NC7401]
gi|50400906|sp|Q730Q8.1|ISPG_BACC1 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|254806868|sp|B9IY45.1|ISPG_BACCQ RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|42739333|gb|AAS43259.1| gcpE protein [Bacillus cereus ATCC 10987]
gi|221241781|gb|ACM14491.1| gcpE protein [Bacillus cereus Q1]
gi|358354812|dbj|BAL19984.1| gcpE protein [Bacillus cereus NC7401]
Length = 367
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 2 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 61
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 62 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 114
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 115 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 154
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 155 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 209
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 210 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 249
>gi|423478423|ref|ZP_17455138.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6X1-1]
gi|402428585|gb|EJV60682.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG6X1-1]
Length = 376
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNKGIGNTLRISLSADPVEEVKVAREL 252
>gi|384085564|ref|ZP_09996739.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Acidithiobacillus thiooxidans ATCC 19377]
Length = 366
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/272 (43%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG VAIG PI VQ+MT +T+DVA TV ++ R+ GAD+VR++V
Sbjct: 9 RRKTRQIHVGKVAIGGYAPISVQSMTNTETRDVAATVAQIRRLEAVGADIVRVSVPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV-AECFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ + PLVADIHF +AL+V A+ D +R+NPGN L+
Sbjct: 69 AEAFKAIRAQV-----ETPLVADIHFDHRIALQVMADGVDGLRINPGNIG-------SLD 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
T +VE K G +RIG N GSL I YG+ +P +VESA
Sbjct: 117 KT---------------RLVVEMAKDKGIPIRIGVNAGSLEKDIQEKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +L+FH+ S+KAS+ + V AYRLL ++ DYPLHLG+TEAG G
Sbjct: 162 LRHVSILDELNFHDVKISVKASDVFLAVGAYRLLSEKV-----DYPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G LL+DG+GDTIR+SL P +EI
Sbjct: 217 TVKSAIGLGLLLRDGIGDTIRISLAADPVEEI 248
>gi|388543574|ref|ZP_10146864.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. M47T1]
gi|388278131|gb|EIK97703.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. M47T1]
Length = 369
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D GAD+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIRRLEDAGADIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----QQVRVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFKDFKVSVKASDVFMAVEAYRLLATQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL DG+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLADGIGDTIRISLAADPVEEV 248
>gi|119717426|ref|YP_924391.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardioides
sp. JS614]
gi|119538087|gb|ABL82704.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardioides
sp. JS614]
Length = 387
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 175/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS++P+ VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 23 RRKTRQIRVGKVGVGSDYPVSVQSMTTTQTSDVNSTLQQIAELTATGCDIVRVACPSQDD 82
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ QK+ IP++ADIHF P A C +RVNPGN +
Sbjct: 83 ADAL----PAIAQKS-QIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGN----------I 126
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
DD+ ++ + K G ++RIG N GSL R++ YG +P +VES
Sbjct: 127 RKFDDQVKE-----------IARAAKDRGTSIRIGVNAGSLDKRLLEKYGKATPEALVES 175
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K ++PVVMV+AY EM D+PLHLGVTEAG
Sbjct: 176 AVWEASLFEEHDFHDFKISVKHNDPVVMVRAY-----EMLAERGDWPLHLGVTEAGPAFQ 230
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA G LL G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 231 GTIKSATAFGALLSQGIGDTIRVSLSAPPVEEVKVGIQILQSLNLRPRKLEIVSCP--SC 288
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 289 GRAQVDVYTLAEQVTAGLEGLEVPLR 314
>gi|239827737|ref|YP_002950361.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Geobacillus
sp. WCH70]
gi|259493935|sp|C5D4Q3.1|ISPG_GEOSW RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|239808030|gb|ACS25095.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geobacillus sp. WCH70]
Length = 363
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 159/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VGN+ IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVRVGNLTIGGNNEVIIQSMTTTKTHDVEATVAQIKRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGADKIRINPGNIGRR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI +LDFH+ + S+KAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALYHIRILEELDFHDIIVSLKASDVRLAIEAY-----EKAARTFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+TIRVSL+ P +E+ + +
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTIRVSLSADPVEEVKVAKEI 252
>gi|423354774|ref|ZP_17332399.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus IS075]
gi|401086084|gb|EJP94315.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus IS075]
Length = 370
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLIIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|29829103|ref|NP_823737.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
avermitilis MA-4680]
gi|50400992|sp|Q82K43.1|ISPG1_STRAW RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
1; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase 1
gi|29606209|dbj|BAC70272.1| putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Streptomyces avermitilis MA-4680]
Length = 385
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 175/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGTVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +++ + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----AVIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K++G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IAKAAKEHGTPIRIGVNAGSLDRRLLEKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV AYR L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMVNAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R L+ P
Sbjct: 227 TIKSAVAFGALLSEGIGDTIRVSLSAPPVEEIKVGIQILESLNLRQRGLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 RAQVDVYKLAEEVTAGLEGMEVPLR 309
>gi|300743961|ref|ZP_07072981.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
dentocariosa M567]
gi|311113211|ref|YP_003984433.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
dentocariosa ATCC 17931]
gi|300380322|gb|EFJ76885.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
dentocariosa M567]
gi|310944705|gb|ADP40999.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
dentocariosa ATCC 17931]
Length = 386
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 154/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR VG V IGSE PI VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 18 RRKTRQFKVGAVGIGSESPISVQSMTTTKTHDIGSTLQQIAELTAAGCDIVRVACPTDKD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K NIP++ADIHF P V + +RVNPGN +
Sbjct: 78 AEAL-----PIIAKQSNIPVIADIHFQPKYVYAAIKAGCGAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + E +G ++RIG N GSL R++ YG +P +VESA
Sbjct: 123 KFDDQVKE-----------IAEMASDHGTSIRIGVNAGSLDKRLLEKYGHATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F +F S+K ++PVVMV+AYR L A D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHGFRDFKISVKHNDPVVMVEAYRQLAAR-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++ GTLL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSSVAFGTLLSQGIGDTIRVSLSAPPVEEV 258
>gi|229117776|ref|ZP_04247143.1| hypothetical protein bcere0017_40470 [Bacillus cereus Rock1-3]
gi|423377862|ref|ZP_17355146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG1O-2]
gi|423547583|ref|ZP_17523941.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB5-5]
gi|423622632|ref|ZP_17598410.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD148]
gi|228665674|gb|EEL21149.1| hypothetical protein bcere0017_40470 [Bacillus cereus Rock1-3]
gi|401179304|gb|EJQ86477.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus HuB5-5]
gi|401260752|gb|EJR66920.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus VD148]
gi|401636128|gb|EJS53882.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BAG1O-2]
Length = 370
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 156/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 THRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIANIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ YG + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|373251475|ref|ZP_09539593.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nesterenkonia
sp. F]
Length = 389
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 171/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 19 RRTTRNFQVGDVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPTDKD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN ++
Sbjct: 79 AEAL-----PIIARKSKIPVIADIHFQPKYVFAAIEAGCGAVRVNPGNI---------IK 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ D + + K G ++RIG N GSL R+M +G +P +VESA
Sbjct: 125 FDDK------------VGEIAQAAKDAGVSLRIGVNAGSLDKRLMDKHGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K +PVVMVQAY E D+PLHLGVTEAG G G
Sbjct: 173 VREAALFEEHDFHDFKISVKHHDPVVMVQAY-----EQLAERGDWPLHLGVTEAGPGFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KS+ G+LL G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 228 TIKSSTAFGSLLSKGIGDTIRVSLSAPPAEEVKVGAQILESLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 286 RAQVDVYKLADEVTAGLEGMEVPLR 310
>gi|77362057|ref|YP_341631.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas haloplanktis TAC125]
gi|123586938|sp|Q3ICZ5.1|ISPG_PSEHT RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|76876968|emb|CAI89185.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudoalteromonas haloplanktis TAC125]
Length = 372
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVGATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ SP ++ESA
Sbjct: 115 -------------EERIRAVVDAAREHNIPIRIGVNGGSLERDLQEKYGEPSPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVNILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
>gi|403237508|ref|ZP_10916094.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
10403023]
Length = 365
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPVKVGNLTIGGNNEVVIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K +IPLV DIHF +AL+ E DKIR+NPGN +
Sbjct: 60 ACPDERAANAIPEIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRK- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILDKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASSVPLAIEAY-----EKAAQAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFSGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|51892639|ref|YP_075330.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Symbiobacterium thermophilum IAM 14863]
gi|73621105|sp|Q67PA7.1|ISPG_SYMTH RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|51856328|dbj|BAD40486.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Symbiobacterium thermophilum IAM 14863]
Length = 370
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG V IG PI VQ+MT DT+DV + ++ + + G D+VR+ E
Sbjct: 4 RRKTRAVKVGRVQIGGGAPITVQSMTKCDTRDVPEVLRQIRALEEAGCDIVRVAAP-TME 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A CF+ ++K NIPLVAD+HF +AL+V E DK+R+NPGN R
Sbjct: 63 AAECFK----EIRKGCNIPLVADVHFDYRIALKVLEAGIDKLRINPGNIGAR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+EEV V CK G +RIG N GSL + + YG + GMVESA
Sbjct: 111 ----------WKVEEV----VRACKDRGVPIRIGVNAGSLEEEFLEKYGYPTADGMVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ I +LDFH+ + S+K+S M++AYR L ++ DYPLH+GVTEAG G
Sbjct: 157 LKHVAILEELDFHDIVISIKSSRVDQMIEAYRKLSEKV-----DYPLHVGVTEAGTPFAG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+GIGT+L +G+GDTIRVSL+ +E+
Sbjct: 212 TIKSAVGIGTILAEGIGDTIRVSLSTDCVEEV 243
>gi|210622745|ref|ZP_03293337.1| hypothetical protein CLOHIR_01285 [Clostridium hiranonis DSM 13275]
gi|210154077|gb|EEA85083.1| hypothetical protein CLOHIR_01285 [Clostridium hiranonis DSM 13275]
Length = 351
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KTR V GNV IG ++PI VQ+M DT+D T+ ++ R+ + G +LVR+ V
Sbjct: 5 RKKTRVVTCGNVKIGGDNPISVQSMANTDTRDAKATIAQIKRLEEAGCELVRVAVPDMEA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+ EIK + NIPL+ADIHF +AL+ E D +R+NPGN D+
Sbjct: 65 AEKISEIKAGI-----NIPLIADIHFDYRLALKAIEQGIDGVRINPGNIGDK-------- 111
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ + EV VE CK +RIG N GSL ++ YG+ MVESA
Sbjct: 112 ----------ERVREV----VEACKANNIGIRIGVNGGSLEKHLLEKYGEPCAEAMVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + S+K S+ V+AY L+ ++ DYPLH+G+TE+G + G
Sbjct: 158 MGHIKILEDLDFHDIVISLKNSDIFRTVEAYELMSEKV-----DYPLHIGITESGSIKRG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G+LL G+GDT+R+SLT P +E+
Sbjct: 213 TIKSSIGVGSLLMKGIGDTMRISLTGDPVEEV 244
>gi|423200197|ref|ZP_17186777.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AER39]
gi|404620168|gb|EKB17067.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AER39]
Length = 371
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 157/273 (57%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRK+R +MVGNV +G + PI VQTMT T DVA T+E++ RI GAD+VR++V
Sbjct: 9 IRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATIEQIQRIERVGADIVRVSVPTME 68
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A L+++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 69 AAEAF-----RLIKQQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN-------- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+ + +RIG N GSL I YG+ +P +VES
Sbjct: 116 --------------EQRVRSVVDCARDLNIPIRIGVNGGSLEKDIQEKYGEPTPEALVES 161
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A +LDF +F S+KAS+ + V AYRLL ++ + PLHLG+TEAG
Sbjct: 162 AMRHVDYLDRLDFQDFKVSVKASDVFLAVGAYRLLAKQI-----EQPLHLGITEAGGFRA 216
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSAIG+G LL DG+GDT+R+SL P +E+
Sbjct: 217 GAVKSAIGLGMLLTDGIGDTLRISLAADPVEEV 249
>gi|407275702|ref|ZP_11104172.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
sp. P14]
gi|407275709|ref|ZP_11104179.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
sp. P14]
Length = 384
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 153/273 (56%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQLMVGDVGVGSDHPVSVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + K IP++ADIHF P A C +RVNPGN
Sbjct: 79 ADAL-----AAIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+S YG +P +VES
Sbjct: 123 ----KEFDGRVKEVAKAAG-------AAGIPIRIGVNAGSLDPRILSKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 172 ALWEASLFEEHGFGDLKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL +G+GDTIRVSL+ PP +EI
Sbjct: 227 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEI 259
>gi|392420163|ref|YP_006456767.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri CCUG 29243]
gi|390982351|gb|AFM32344.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri CCUG 29243]
Length = 370
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +T DV TV ++ R+A+ GAD+VR++V
Sbjct: 9 RRQSRKIWVGNVPVGGDAPISVQSMTNTETCDVEATVAQIQRLANAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK LVQ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIKQ-LVQ----LPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVDHLDRLDFQDFKVSVKASDVFMAVEAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
>gi|452746468|ref|ZP_21946288.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri NF13]
gi|452009721|gb|EME01934.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri NF13]
Length = 370
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +T DV TV ++ R+A+ GAD+VR++V
Sbjct: 9 RRQSRKIWVGNVPVGGDAPISVQSMTNTETCDVEATVAQIQRLANAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK LVQ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIKQ-LVQ----LPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVDHLDRLDFQDFKVSVKASDVFMAVEAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
>gi|379710031|ref|YP_005265236.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardia
cyriacigeorgica GUH-2]
gi|374847530|emb|CCF64600.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Nocardia cyriacigeorgica GUH-2]
Length = 377
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 173/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +GS+HPI VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 12 RRKTRQLMVGNVGVGSDHPISVQSMTTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + + IP++ADIHF P A C +RVNPGN
Sbjct: 72 ADAL-----ATIARKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R++ YG +P +VES
Sbjct: 116 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRMLEKYGKATPEALVES 164
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 165 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 219
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 220 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGGQILQSLNLRPRKLE--IVSCPSC 277
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 278 GRAQVDVYTLANEVTAGLEGMEVPLR 303
>gi|52081042|ref|YP_079833.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319645000|ref|ZP_07999233.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
BT1B_CT2]
gi|404489924|ref|YP_006714030.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|423683016|ref|ZP_17657855.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthetase [Bacillus
licheniformis WX-02]
gi|73621080|sp|Q65HA9.1|ISPG_BACLD RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|52004253|gb|AAU24195.1| IspG protein [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52348921|gb|AAU41555.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317392809|gb|EFV73603.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
BT1B_CT2]
gi|383439790|gb|EID47565.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthetase [Bacillus
licheniformis WX-02]
Length = 370
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA EIK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAADAIPEIK-----KRISIPLVVDIHFNYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVNAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|363895304|ref|ZP_09322302.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium ACC19a]
gi|361957742|gb|EHL11047.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium ACC19a]
Length = 348
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 158/282 (56%), Gaps = 34/282 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KT V GNV IG +PI +Q+MT T D T+ ++ + G +LVR++V +
Sbjct: 4 RKKTVEVKCGNVKIGGNNPIVIQSMTNTKTSDFISTINQIHSLEKAGCELVRVSVPDEES 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A S +++N NIPL+ADIHF +AL E D +R+NPGN
Sbjct: 64 AKAI-----SKIRENINIPLIADIHFDYRLALMAIENGVDGLRINPGNIGS--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
DE +E+ V+K K+YG +RIG N GSL I YG +P+ MVESA
Sbjct: 110 ---DERVREV----------VKKAKQYGIKIRIGVNLGSLEKNIQREYGRTPKAMVESAL 156
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
+ + DF+N + S+KAS+ +QAY E + +YPLHLGVTEAG G
Sbjct: 157 YNIELLEENDFYNTVVSLKASDIKTTIQAY-----EEFSKISNYPLHLGVTEAGTARAGT 211
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KS++GIG LL +G+GDTIRVSLT P +EID + L N+G
Sbjct: 212 VKSSMGIGYLLLNGIGDTIRVSLTADPVEEIDVAKMILQNIG 253
>gi|251798423|ref|YP_003013154.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
sp. JDR-2]
gi|247546049|gb|ACT03068.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Paenibacillus sp. JDR-2]
Length = 369
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 156/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ T V VGN+ IG + + +Q+M T T DV TV E++R+ + G +VR+TV K
Sbjct: 3 LRKDTVPVKVGNLTIGGSNEVIIQSMCTTKTADVEATVAEILRLEEAGCQIVRVTVNNKE 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
ADA EIK K +IPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 63 AADAIKEIK-----KRIHIPLVADIHFDYRLALQAIENGIDKVRINPGNIG-RREKIEA- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+V+ CK+ G +RIG N GSL + ++ YG +P MVES
Sbjct: 116 --------------------VVKACKERGIPIRIGVNAGSLENHLLEKYGYPTPEAMVES 155
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I +LDFH+ + S+KAS+ + + AY M YPLHLG+TEAG
Sbjct: 156 ALFHIGILEELDFHDIIVSLKASDVPMAIAAY-----SMAAEKIKYPLHLGITEAGTLHS 210
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KS+ GIG LL G+G+T+R+SL+ P +E+ R L
Sbjct: 211 GTIKSSAGIGALLAMGIGNTVRISLSADPVEEVKVAREL 249
>gi|423138438|ref|ZP_17126081.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
nucleatum subsp. animalis F0419]
gi|371957803|gb|EHO75546.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 358
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 158/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ RKTR V VGN+ IG +PI +Q+MT ++ DV TV ++ + G LVR+T+ +
Sbjct: 1 MERKTRVVKVGNLKIGGNNPIIIQSMTNTNSADVESTVRQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYSKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AIYHIRLLEKFEFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLIDGIGDTLRVSLTENPVEEIKVAKEI 247
>gi|452946793|gb|EME52286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
ruber BKS 20-38]
Length = 384
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 153/273 (56%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQLMVGDVGVGSDHPVSVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + K IP++ADIHF P A C +RVNPGN
Sbjct: 79 ADAL-----ATIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+S YG +P +VES
Sbjct: 123 ----KEFDGRVKEVAKAAG-------DAGIPIRIGVNAGSLDPRILSKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 172 ALWEASLFEEHGFGDLKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL +G+GDTIRVSL+ PP +EI
Sbjct: 227 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEI 259
>gi|452975067|gb|EME74886.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
sonorensis L12]
Length = 370
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA EIK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAADAIPEIK-----KRISIPLVVDIHFNYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVNAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|359426484|ref|ZP_09217568.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
amarae NBRC 15530]
gi|358238273|dbj|GAB07150.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
amarae NBRC 15530]
Length = 400
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 173/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+H I VQ+M T T DV T++++ ++ G D+VR+ + +
Sbjct: 32 RRKTRQIMVGSVGVGSDHQISVQSMCTTKTHDVNSTLQQIAQLTASGCDMVRVACPRQED 91
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI + NIP++ADIHF P A C +RVNPGN
Sbjct: 92 ADALPEIA-----RKANIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 135
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 136 ----KEFDGRVKEVAKAAG-------AAGIPIRIGVNAGSLDKRLMEKYGKATPEALVES 184
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 185 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 239
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI L +L +R +L+ +
Sbjct: 240 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDAILQSLNLRPRKLE--IVSCPSC 297
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 298 GRAQVDVYKLANEVTAGLEGMEVPLR 323
>gi|150390442|ref|YP_001320491.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alkaliphilus metalliredigens QYMF]
gi|149950304|gb|ABR48832.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alkaliphilus metalliredigens QYMF]
Length = 348
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 167/290 (57%), Gaps = 35/290 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRKT+ + GNV +G H + VQ+M T+D ++++ V E++R+ + G D+VRI V
Sbjct: 1 MRRKTKEIQCGNVMVGGNHQVSVQSMITSDPRNISSAVAEILRLEEAGCDIVRIAVPTME 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQL 202
A ++IK K IP+VADIHF +AL + + D +R+NPGN D
Sbjct: 61 SAKNIYDIK-----KQTTIPIVADIHFDYRLALESIKQGIDGLRLNPGNIGD-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
EE +V + KK +RIG N GSL +++ YG +P +VES
Sbjct: 108 --------------EERVRKVVNQAKKNRIPIRIGVNGGSLEKQLLEKYGHATPEALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A RI +DF + + S+KAS+ + V AY+L+ +++ YPLHLG+TEAG +
Sbjct: 154 AMGHVRILEDMDFDDIVISLKASDVQLTVAAYQLISKKVH-----YPLHLGITEAGTVKT 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAEL 370
G +KSAIGIG+LL G+GDTIRVSLT P +E+ ++ L +LG++ E+
Sbjct: 209 GTIKSAIGIGSLLLMGIGDTIRVSLTGDPVEEVYVGKQILKSLGLKQGEV 258
>gi|310779244|ref|YP_003967577.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Ilyobacter
polytropus DSM 2926]
gi|309748567|gb|ADO83229.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Ilyobacter
polytropus DSM 2926]
Length = 370
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/282 (41%), Positives = 160/282 (56%), Gaps = 35/282 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
+R + VGN+ IG + + +Q+MT T D+ TV+++ + + G LVR+TV A+A
Sbjct: 20 SRKIKVGNIYIGGDSEVIIQSMTNTKTSDIKATVKQIKELENAGCQLVRVTVNDTEAAEA 79
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLEYTD 206
EIK K +IPL ADIHF +A+ E DK+R+NPGN + D
Sbjct: 80 IKEIK-----KQISIPLAADIHFDYRLAISAMENGVDKLRINPGNIGN-----------D 123
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
D+ + +VEK K+Y +RIG N GSL I+ YG +P MVES
Sbjct: 124 DK-----------VAMVVEKAKEYNIPIRIGVNAGSLEKSILEKYGRPTPEAMVESGLYH 172
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+ K F + + S+K+SN +MV+AYR++ E+ DYPLHLGVTEAG G +K
Sbjct: 173 VRLLEKFGFEDIIISLKSSNVKMMVRAYRMM-REIV----DYPLHLGVTEAGTAFQGTVK 227
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
S+IGIG LL D +GDTIRVSLTE P +EI + L LG+R
Sbjct: 228 SSIGIGGLLVDDIGDTIRVSLTENPVEEIKVAKEILKVLGLR 269
>gi|104780240|ref|YP_606738.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
entomophila L48]
gi|166217122|sp|Q1IEI1.1|ISPG_PSEE4 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|95109227|emb|CAK13924.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas entomophila L48]
Length = 369
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK K ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----KLVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQII-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|403722370|ref|ZP_10945005.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
rhizosphera NBRC 16068]
gi|403206682|dbj|GAB89336.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
rhizosphera NBRC 16068]
Length = 384
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 152/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 16 RRKTRQIQVGRVGVGSDHPISVQSMTTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 75
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA S + ++ IP++ADIHF P A C +RVNPGN +
Sbjct: 76 ADAL-----STIAEHSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNIKEF------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
D KE+ H G +RIG N GSL R++ YG +P +VES
Sbjct: 123 ----DGRVKEVAH----------AASAAGVPIRIGVNAGSLDPRLLKKYGKATPEALVES 168
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 169 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 223
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL DG+GDTIRVSL+ PP +E+
Sbjct: 224 GTIKSAVAFGALLSDGIGDTIRVSLSAPPAEEV 256
>gi|284992357|ref|YP_003410911.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geodermatophilus obscurus DSM 43160]
gi|284065602|gb|ADB76540.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Geodermatophilus obscurus DSM 43160]
Length = 387
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 152/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+HP+ VQ+MTT T D+ T++++ + G +VR+ V +
Sbjct: 20 RRKTRQLMVGDVGVGSDHPVSVQSMTTTKTADINATLQQIAELTASGCQIVRVAVPDTDD 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ + IP++ADIHF P A C +RVNPGN
Sbjct: 80 AEAL-----PIIARKSQIPVIADIHFQPRYVFAAIDAGCA-AVRVNPGN----------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
++ ++ + K G +RIG N GSL R+++ YG +P +VES
Sbjct: 123 ----------IKKFDDKVGEIARAAKGAGIPIRIGVNAGSLDKRLLAKYGKATPEALVES 172
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + + DF + S+K +NPVVMV+AY LL A+ DYPLHLGVTEAG
Sbjct: 173 ALWECSLFEEHDFRDIKISVKHNNPVVMVRAYELLAAQ-----CDYPLHLGVTEAGPAFQ 227
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 228 GTIKSAVAFGALLSQGIGDTIRVSLSAPPAEEV 260
>gi|269956002|ref|YP_003325791.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Xylanimonas cellulosilytica DSM 15894]
gi|269304683|gb|ACZ30233.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Xylanimonas cellulosilytica DSM 15894]
Length = 396
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 150/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG VA+G + PI VQ+MTT T D+ T++++ + G D+VR+ V +
Sbjct: 30 RRPTRKIQVGKVAMGGDAPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVAVPTADD 89
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A I + IP+VADIHF P E +RVNPGN +
Sbjct: 90 AAALPAIA-----RKSQIPVVADIHFQPKYVFAAIEAGCAGVRVNPGN----------IR 134
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ + + + K +G A+RIG N GSL R+++ YG +P MVESA
Sbjct: 135 KFDDQIKD-----------IAQAAKDHGTALRIGVNAGSLDPRLLAKYGKATPEAMVESA 183
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PVVMV+AY EM D+PLHLGVTEAG G
Sbjct: 184 IWEASLFEEHDFHDFAISVKHNDPVVMVRAY-----EMLSEAGDWPLHLGVTEAGPAFQG 238
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL G+GDTIRVSL+ PP +E+
Sbjct: 239 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEV 270
>gi|407001695|gb|EKE18628.1| hypothetical protein ACD_9C00277G0001 [uncultured bacterium]
Length = 349
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 160/273 (58%), Gaps = 33/273 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T + + V VGN+ +G +P+RVQ+M DT+DV TV++++ + +G ++VR+ V
Sbjct: 2 TKKYMSSVVKVGNLKLGGNNPVRVQSMCNTDTRDVKATVKQILALEKEGCEIVRVAVPDM 61
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQ 201
A A +IK+ + +IPLVADIHF +AL + + DK+R+NPGN
Sbjct: 62 AAAKAIGKIKSKI-----HIPLVADIHFDYLLALEAIKQGIDKVRINPGNIGS------- 109
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261
+E+V +VE CKK +RIG N GS+ +++ YG +PR VES
Sbjct: 110 --------------VEKV-QAVVEACKKKKIPIRIGVNVGSIEKKLLDKYGATPRAAVES 154
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A RI KLDFH+ + S+K S M++AYR+L ++ YPLHLGVT AG
Sbjct: 155 ALGHVRILEKLDFHDIVVSIKFSEIPPMLEAYRMLGKKI-----KYPLHLGVTHAGTSFM 209
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +K+AIG+GTLL++G+G T+RVSLT P +E+
Sbjct: 210 GSIKNAIGVGTLLEEGIGATMRVSLTADPLEEV 242
>gi|431926421|ref|YP_007239455.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri RCH2]
gi|431824708|gb|AGA85825.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri RCH2]
Length = 370
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG+V +G + PI VQ+MT +T DV TV ++ R+A+ GAD+VR++V
Sbjct: 9 RRQSRKIWVGSVPVGGDAPISVQSMTNTETCDVEATVAQIQRLANAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK LVQ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIKR-LVQ----LPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVDHLDRLDFQDFKVSVKASDVFMAVEAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL DG+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLADGIGDTIRVSLAADPVEEI 248
>gi|26987589|ref|NP_743014.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida KT2440]
gi|386010516|ref|YP_005928793.1| protein IspG [Pseudomonas putida BIRD-1]
gi|32129667|sp|Q88PJ7.1|ISPG_PSEPK RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|24982265|gb|AAN66478.1|AE016276_13 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas putida KT2440]
gi|313497222|gb|ADR58588.1| IspG [Pseudomonas putida BIRD-1]
Length = 369
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----QRVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|148546127|ref|YP_001266229.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida F1]
gi|395447291|ref|YP_006387544.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida ND6]
gi|397696917|ref|YP_006534800.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synt [Pseudomonas
putida DOT-T1E]
gi|421524499|ref|ZP_15971121.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida LS46]
gi|166217124|sp|A5VYT5.1|ISPG_PSEP1 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|148510185|gb|ABQ77045.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida F1]
gi|388561288|gb|AFK70429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida ND6]
gi|397333647|gb|AFO50006.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synt [Pseudomonas
putida DOT-T1E]
gi|402751678|gb|EJX12190.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida LS46]
Length = 369
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----QRVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|392960431|ref|ZP_10325899.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans DSM 17108]
gi|421054812|ref|ZP_15517777.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pelosinus
fermentans B4]
gi|421058892|ref|ZP_15521537.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans B3]
gi|421066775|ref|ZP_15528335.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans A12]
gi|421071674|ref|ZP_15532790.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans A11]
gi|392440493|gb|EIW18173.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Pelosinus
fermentans B4]
gi|392446939|gb|EIW24210.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans A11]
gi|392453244|gb|EIW30131.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans A12]
gi|392455008|gb|EIW31815.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans DSM 17108]
gi|392459934|gb|EIW36294.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans B3]
Length = 359
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 185/369 (50%), Gaps = 61/369 (16%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR T V VG V +G PI VQ+MT T DVAGTV ++M++ G D+VR+ V
Sbjct: 7 RRMTNPVYVGKVMVGGRAPISVQSMTNTKTDDVAGTVAQIMQLGSAGCDIVRLAVPDMSA 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A EIK+ + IPL+ADIHF A+ E D +R+NPGN AD
Sbjct: 67 ALAIKEIKSKV-----QIPLIADIHFDYRFAIAAMENGVDALRINPGNIADA-------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD--SPRGMVES 261
H+ + +V++ KK +RIG N GSL I+ YG +P GMVES
Sbjct: 114 ----------THV----AIIVKEAKKRSIPIRIGVNAGSLEKSILEKYGGHPTPAGMVES 159
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KLDF + S+KA++ + + AY+L+ + +YPLHLG+TEAG +
Sbjct: 160 AMQHIAILEKLDFRDIKISLKANDVPMTINAYQLMSETV-----NYPLHLGITEAGTIKS 214
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRA------------- 367
G +KSA+GIG LL G+GDTIRVSLT P +EI L +LG++
Sbjct: 215 GMIKSAVGIGALLAQGIGDTIRVSLTGDPVEEIKAANEILKSLGLKEYGPTLISCPTCGR 274
Query: 368 -----AELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDY-------RGVLHRDGSV 415
AE+ + V + R F + E +E D +G++ R G +
Sbjct: 275 CNINLAEIAEQVEQKLSQVRKPFKVAVMGCVVNGPGEAKEADVGIAGGKGQGLVFRKGEI 334
Query: 416 LMSVSLDQL 424
+ VS DQL
Sbjct: 335 VKRVSEDQL 343
>gi|429332406|ref|ZP_19213131.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida CSV86]
gi|428762905|gb|EKX85095.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida CSV86]
Length = 369
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQINRLIDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVSVPLVADIHFDYRIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL DG+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLADGIGDTIRISLAADPVEEV 248
>gi|451334929|ref|ZP_21905499.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Amycolatopsis azurea DSM 43854]
gi|449422468|gb|EMD27842.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Amycolatopsis azurea DSM 43854]
Length = 377
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 172/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GSEHPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 12 RRKTRQLQVGPVGVGSEHPISVQSMTTTLTSDVNATLQQIAELTAAGCDIVRVACPSADD 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I + IP++ADIHF P E +RVNPGN +
Sbjct: 72 AEALPAIA-----RKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL RIM YG +P + ESA
Sbjct: 117 KFDDQVKE-----------IAKAAKDHGTPIRIGVNAGSLDKRIMDKYGKATPEALAESA 165
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF++ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 166 LWEASLFAEHDFYDVKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 220
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L ++ +L+ P
Sbjct: 221 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGIQILQSLNLKERKLEIVSCP--SCG 278
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 279 RAQVDVYTLAEQVTAGLEGMEVPLR 303
>gi|402838219|ref|ZP_10886731.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium OBRC8]
gi|402273723|gb|EJU22918.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium OBRC8]
Length = 348
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 158/282 (56%), Gaps = 34/282 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KT V GNV IG +PI +Q+MT T D T+ ++ + G +LVR++V +
Sbjct: 4 RKKTVEVRCGNVKIGGNNPIVIQSMTNTKTSDYTSTINQIHSLEKAGCELVRVSVPDEES 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A S +++N NIPL+ADIHF +AL E D +R+NPGN
Sbjct: 64 AKAI-----SKIRENINIPLIADIHFDYRLALMAIENGVDGLRINPGNIGS--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
DE +E+ V+K K+YG +RIG N GSL I YG +P+ MVESA
Sbjct: 110 ---DERVREV----------VKKAKQYGIKIRIGVNLGSLEKNIQREYGRTPKAMVESAL 156
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
+ + DF+N + S+KAS+ +QAY E + +YPLHLGVTEAG G
Sbjct: 157 YNIELLEENDFYNTVVSLKASDIKTTIQAY-----EEFSKISNYPLHLGVTEAGTARAGA 211
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KS++GIG LL +G+GDTIRVSLT P +EID + L N+G
Sbjct: 212 VKSSMGIGYLLLNGIGDTIRVSLTADPVEEIDVAKMILQNIG 253
>gi|386287226|ref|ZP_10064401.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [gamma
proteobacterium BDW918]
gi|385279758|gb|EIF43695.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [gamma
proteobacterium BDW918]
Length = 370
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + +GNVA+G + PI VQ+MT +T DVA TV ++ R+ AD+VR++V
Sbjct: 9 RRVSRQIHIGNVAVGGDAPISVQSMTNTETCDVAATVAQIKRLEAACADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A EI+ K ++PLVADIHF +A++VAE D +R+NPGN
Sbjct: 69 AEAFREIR-----KQVSVPLVADIHFDHKIAIKVAEYGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +++ K + +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVIDAAKYHNIPIRIGVNAGSLEKELQRKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I KLDF NF S+KAS+ + V AYR + A++ D PLHLG+TEAG G
Sbjct: 162 MRHIDILDKLDFQNFKLSVKASDVFMAVAAYRQIAAQI-----DQPLHLGITEAGGLRGG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL DG+GDTIRVSL P +E+
Sbjct: 217 TVKSAVGLGLLLMDGIGDTIRVSLAADPVEEV 248
>gi|363893173|ref|ZP_09320312.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium CM2]
gi|361961697|gb|EHL14880.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Eubacteriaceae bacterium CM2]
Length = 348
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 158/282 (56%), Gaps = 34/282 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KT V GNV IG +PI +Q+MT T D T+ ++ + G +LVR++V +
Sbjct: 4 RKKTVEVKCGNVKIGGNNPIVIQSMTNTKTSDFISTINQIHSLEKAGCELVRVSVPDEES 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A S +++N NIPL+ADIHF +AL E D +R+NPGN
Sbjct: 64 AKAI-----SKIRENINIPLIADIHFDYRLALMAIENGVDGLRINPGNIGS--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
DE +E+ V+K K+YG +RIG N GSL I YG +P+ MVESA
Sbjct: 110 ---DERVREV----------VKKAKQYGIKIRIGVNLGSLEKNIQREYGRTPKAMVESAL 156
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
+ + DF+N + S+KAS+ +QAY E + +YPLHLGVTEAG G
Sbjct: 157 YNIELLEENDFYNTVVSLKASDIKTTIQAY-----EEFSKISNYPLHLGVTEAGTARAGA 211
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLG 364
+KS++GIG LL +G+GDTIRVSLT P +EID + L N+G
Sbjct: 212 VKSSMGIGYLLLNGIGDTIRVSLTADPVEEIDVAKMILQNIG 253
>gi|260494839|ref|ZP_05814969.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 3_1_33]
gi|260198001|gb|EEW95518.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 3_1_33]
Length = 291
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 156/277 (56%), Gaps = 34/277 (12%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
RKTR + VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ + A
Sbjct: 3 RKTRVIKVGNLEIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIKAA 62
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEY 204
+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 63 EAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG----------- 106
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAF 263
+D+ +K +VE K+ +RIG N GS+ I+ Y +VESA
Sbjct: 107 SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYSKPCVDALVESAM 155
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
R+ K DF + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG G
Sbjct: 156 YHIRLLEKFDFFDIMVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQGT 210
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 211 IKSAIGIGALLIDGIGDTLRVSLTENPVEEIKVAKEI 247
>gi|325272135|ref|ZP_08138567.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. TJI-51]
gi|324102731|gb|EGC00146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. TJI-51]
Length = 369
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----QQVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLARQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|399519575|ref|ZP_10760370.1| 4-hydroxy-3-methylbut-2-en-1-yl diphospha [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112671|emb|CCH36928.1| 4-hydroxy-3-methylbut-2-en-1-yl diphospha [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 370
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 161/281 (57%), Gaps = 36/281 (12%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
+CES K RR++R + VG+V +G + PI VQ+MT DT DVA TV ++ R+ + GAD+V
Sbjct: 2 HCESPIK--RRQSRKIWVGSVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLENAGADIV 59
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 60 RVSVPDMDAAEAFGRIK-----QQVRVPLVADIHFDYQIALRVAELGVDCLRINPGNIGR 114
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +VE + G +RIG N GSL + YG+
Sbjct: 115 ----------------------EDRVKAVVEAARDKGIPIRIGVNAGSLEKDLQKKYGEP 152
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P +VESA +L+F +F S+KAS+ + V+AYRLL ++ + PLHLG+
Sbjct: 153 TPAALVESALRHVEHLDRLNFPDFKVSVKASDVFMAVEAYRLLAKQI-----EQPLHLGI 207
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 208 TEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 248
>gi|359456416|ref|ZP_09245577.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20495]
gi|358046531|dbj|GAA81826.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20495]
Length = 372
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 ADAFKSIKEQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
>gi|431800908|ref|YP_007227811.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida HB3267]
gi|430791673|gb|AGA71868.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida HB3267]
Length = 369
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|308174296|ref|YP_003921001.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens DSM 7]
gi|307607160|emb|CBI43531.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus amyloliquefaciens DSM 7]
Length = 375
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVTVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAADAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|421528929|ref|ZP_15975480.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida S11]
gi|402213566|gb|EJT84912.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida S11]
Length = 369
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|331698470|ref|YP_004334709.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudonocardia dioxanivorans CB1190]
gi|326953159|gb|AEA26856.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudonocardia dioxanivorans CB1190]
Length = 380
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 153/278 (55%), Gaps = 33/278 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GSEHPI VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 18 RRKTRQLQVGPVGVGSEHPISVQSMTTTLTADVNATLQQIAELTAAGCDIVRVACPSQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA I + IP++ADIHF P E +RVNPGN +
Sbjct: 78 ADALPAIA-----RKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + G +RIG N GSL R++ YG +P +VESA
Sbjct: 123 KFDDQVKE-----------IAAAARDRGIPIRIGVNAGSLDKRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY LL + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDVKISVKHNDPVVMVRAYELLAEQ-----CDYPLHLGVTEAGPEFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA+ G LL G+GDTIRVSL+ PP E+ R++
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPVNEVKVGRQI 264
>gi|256823055|ref|YP_003147018.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Kangiella
koreensis DSM 16069]
gi|256796594|gb|ACV27250.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Kangiella
koreensis DSM 16069]
Length = 379
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 162/285 (56%), Gaps = 35/285 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI VQ+MT +T DV TV ++ +AD GAD+VR++V +
Sbjct: 9 RRKSRQIMVGNVPVGGDAPIAVQSMTNTETCDVGATVAQIRALADTGADIVRVSVPTMKA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A +++ +PLVADIHF +AL+VAE D +R+NPGN
Sbjct: 69 AEAF-----KFIKQQSPVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +VE + +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EERVKAVVEAARARNIPIRIGVNAGSLEKDLQEKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ + + +F ++ S+KAS+ + V AYR+L E+ D PLHLG+TEAG G
Sbjct: 162 YRHIEMLERHNFKDYKISLKASDVFMTVAAYRILAKEI-----DNPLHLGITEAGSFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
+KSA+G+G LL +G+GDTIRVSL P +E+ L +LG+R
Sbjct: 217 AVKSAVGLGMLLAEGIGDTIRVSLAADPVEEVKVGYDILKSLGLR 261
>gi|187934639|ref|YP_001885465.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
botulinum B str. Eklund 17B]
gi|187722792|gb|ACD24013.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
botulinum B str. Eklund 17B]
Length = 349
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 150/272 (55%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R V VGN+ +G + PI +Q+MTT DT++V T+ ++ + + G D+VR V
Sbjct: 3 RRISRKVKVGNIYVGGDAPITIQSMTTTDTRNVEDTLNQINNLCEAGCDIVRCAVLDMDA 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EI IP+VADIHF +AL E +R+NPGN
Sbjct: 63 AKALREITTK-----SKIPVVADIHFDYRLALESIESGVSALRINPGNIGS--------- 108
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE + EKCK+ +RIG N GSL I+ YG + G+VESA
Sbjct: 109 -------------EERIRLVAEKCKEKNIPIRIGVNSGSLEKDILERYGKPTAEGLVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I KL+FHN + S+K+S+ V+M+ YRL+ + DYPLHLGVTE+G G
Sbjct: 156 LRHVEILEKLNFHNIVISIKSSDVVMMIDCYRLIGDK-----CDYPLHLGVTESGTVTKG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IGIGTLL +G+GDTIRVSLT P EI
Sbjct: 211 TIKSSIGIGTLLAEGIGDTIRVSLTSDPVDEI 242
>gi|110834721|ref|YP_693580.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alcanivorax borkumensis SK2]
gi|123149357|sp|Q0VNE0.1|ISPG_ALCBS RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|110647832|emb|CAL17308.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alcanivorax borkumensis SK2]
Length = 372
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 157/275 (57%), Gaps = 34/275 (12%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
K RRKTR VMVGNV +G + PI VQ+MT ++T DV TV ++ R+ D G D+VR++V
Sbjct: 6 KIERRKTRQVMVGNVPVGGDAPISVQSMTNSETCDVDATVGQIRRLQDAGVDIVRVSVPS 65
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFE 200
A+A +I+ K ++PLVADIH+ +AL VAE D +R+NPGN
Sbjct: 66 MEAAEAFGKIR-----KQVDVPLVADIHYDYKIALAVAEQGVDCLRINPGNIGR------ 114
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMV 259
E+ +++ K G +RIG N GSL + YG+ + +V
Sbjct: 115 ----------------EDRIKAVIQCAKDKGLPIRIGVNAGSLEKELQRKYGEPTSDALV 158
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA A I + DF NF S+KASN + +QAYR L +++ + PLHLGVTEAG
Sbjct: 159 ESALRHADILDRYDFQNFKVSVKASNVFMTLQAYRKLSSQL-----EQPLHLGVTEAGTF 213
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ +G LL +G+GDTIRVSL P +E+
Sbjct: 214 RSGTVKSAVALGALLMEGIGDTIRVSLAADPVEEV 248
>gi|257055052|ref|YP_003132884.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharomonospora viridis DSM 43017]
gi|256584924|gb|ACU96057.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharomonospora viridis DSM 43017]
Length = 383
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 173/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGSVGVGSDHPISVQSMTTTVTADVNATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I IP++ADIHF P E +RVNPGN ++
Sbjct: 78 AEALPAIA-----AKSKIPVIADIHFQPKYVFAAIEAGCAGVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ + + + K +G +RIG N GSL RIM+ +G +P + ESA
Sbjct: 123 KFDDKVGE-----------IAQAAKDHGTPIRIGVNAGSLDPRIMAKHGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K +PVVMV+AY +L E DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDLKISVKHHDPVVMVRAYEILAEE-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPIEEVKVGHQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ +G EV R
Sbjct: 285 RAQVDVYKLADEVTAGLQGLEVPLR 309
>gi|167031911|ref|YP_001667142.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida GB-1]
gi|189045792|sp|B0KPI7.1|ISPG_PSEPG RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|166858399|gb|ABY96806.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas putida GB-1]
Length = 369
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQLV-----SVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|433459020|ref|ZP_20416886.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
crystallopoietes BAB-32]
gi|432192413|gb|ELK49286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
crystallopoietes BAB-32]
Length = 388
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 173/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ P+ VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDSPVSVQSMTTTPTTDINATLQQIAELTAAGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN +
Sbjct: 79 AEAL-----PIIAKKSKIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGN----------I 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
DD+ ++ + + K G ++RIG N GSL R++ YG +P +VES
Sbjct: 123 RKFDDQVKE-----------ISKAAKDAGVSIRIGVNAGSLDPRLLEKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K ++PVVMV+AY EM D+PLHLGVTEAG
Sbjct: 172 AVWEASLFEEHDFHDFKISVKHNDPVVMVRAY-----EMLAERGDWPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 227 GTIKSATAFGALLSKGIGDTIRVSLSAPPVEEIKVGLQILQSLNLRERKLEIVSCP--SC 284
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 285 GRAQVDVYTLADQVTAGLEGMEVPLR 310
>gi|429212020|ref|ZP_19203185.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. M1]
gi|428156502|gb|EKX03050.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. M1]
Length = 370
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 160/281 (56%), Gaps = 36/281 (12%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
+C S K RR++R + VG+V +G + PI VQ+MT DT DVA TV ++ R+ D GAD+V
Sbjct: 2 HCASPIK--RRQSRKIWVGSVPVGGDAPIAVQSMTNTDTLDVAATVAQIRRLEDAGADIV 59
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A +IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 60 RVSVPDMDAAEAFGKIK-----QQVRVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR 114
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +V+ + +RIG N GSL + YG+
Sbjct: 115 ----------------------EDRVKAVVDAARDKNIPIRIGVNAGSLEKDLQKKYGEP 152
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P ++ESA ++LDF NF S+KAS+ + V AYRLL E+ + PLHLG+
Sbjct: 153 TPEALLESAMRHVEHLQRLDFQNFKVSVKASDVFMAVAAYRLLAKEI-----EQPLHLGI 207
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 208 TEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 248
>gi|414071207|ref|ZP_11407180.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. Bsw20308]
gi|410806385|gb|EKS12378.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. Bsw20308]
Length = 372
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 ADAFKSIKAQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
>gi|366166643|ref|ZP_09466398.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acetivibrio
cellulolyticus CD2]
Length = 354
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 170/295 (57%), Gaps = 38/295 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KT+ + +G+ IG + PI VQ+MT DT++ TV ++ R+ D+G +VR+ V
Sbjct: 8 RKKTKKIRIGDTFIGGDSPITVQSMTNTDTRNALATVNQIKRLEDEGCSIVRVAVPDNEA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A +IK S+ +IPLVADIHF +A+ + DKIR+NPGN D+
Sbjct: 68 AEAIRDIKKSI-----HIPLVADIHFDYRLAIACMKNGADKIRLNPGNIGDK-------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ +VE K+ +RIG N GSL +M+ +G +P MVESA
Sbjct: 115 --------------DRVRMVVEVAKERQIPIRIGVNSGSLEKDVMAKFGGVTPEAMVESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
ARI +L+F++ +FS+KASN + + AYR++ + DYPLH+GVTEAG G
Sbjct: 161 LGHARILEELNFYDIVFSLKASNVPMTIAAYRMMSEK-----TDYPLHIGVTEAGTIYKG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGVAPF 377
+KS++G+G LL +G+GDTIRVSLT P +EI + N +++ L++G F
Sbjct: 216 TVKSSVGLGCLLAEGIGDTIRVSLTGDPVEEI----KAGNEILKSLGLKKGGVEF 266
>gi|289764731|ref|ZP_06524109.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium sp. D11]
gi|289716286|gb|EFD80298.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium sp. D11]
Length = 354
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 156/277 (56%), Gaps = 34/277 (12%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
RKTR + VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ + A
Sbjct: 3 RKTRVIKVGNLEIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIKAA 62
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEY 204
+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 63 EAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG----------- 106
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAF 263
+D+ +K +VE K+ +RIG N GS+ I+ Y +VESA
Sbjct: 107 SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYSKPCVDALVESAM 155
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
R+ K DF + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG G
Sbjct: 156 YHIRLLEKFDFFDIMVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQGT 210
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 211 VKSAIGIGALLIDGIGDTLRVSLTENPVEEIKVAKEI 247
>gi|384160154|ref|YP_005542227.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens TA208]
gi|384165084|ref|YP_005546463.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens LL3]
gi|384169223|ref|YP_005550601.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens XH7]
gi|328554242|gb|AEB24734.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens TA208]
gi|328912639|gb|AEB64235.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus amyloliquefaciens LL3]
gi|341828502|gb|AEK89753.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens XH7]
Length = 375
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAADAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|146308515|ref|YP_001188980.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mendocina ymp]
gi|421505102|ref|ZP_15952042.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mendocina DLHK]
gi|166217123|sp|A4XY32.1|ISPG_PSEMY RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|145576716|gb|ABP86248.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mendocina ymp]
gi|400344325|gb|EJO92695.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mendocina DLHK]
Length = 370
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 160/281 (56%), Gaps = 36/281 (12%)
Query: 76 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLV 135
+CES K RR +R + VG+V +G + PI VQ+MT DT DVA TV ++ R+ D GAD+V
Sbjct: 2 HCESPIK--RRLSRKIWVGSVPVGGDAPIAVQSMTNTDTNDVAATVAQIRRLEDAGADIV 59
Query: 136 RITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194
R++V A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 60 RVSVPDMDAAEAFGRIK-----QQVRVPLVADIHFDYQIALRVAELGVDCLRINPGNIGR 114
Query: 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD- 253
E+ +VE + G +RIG N GSL + YG+
Sbjct: 115 ----------------------EDRVKAVVEAARDKGIPIRIGVNAGSLEKDLQKKYGEP 152
Query: 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGV 313
+P +VESA +L+F +F S+KAS+ + V+AYRLL ++ + PLHLG+
Sbjct: 153 TPAALVESALRHVEHLDRLNFPDFKVSVKASDVFMAVEAYRLLAKQI-----EQPLHLGI 207
Query: 314 TEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
TEAG G +KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 208 TEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 248
>gi|398845267|ref|ZP_10602308.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM84]
gi|398253719|gb|EJN38835.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM84]
Length = 369
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQLV-----SVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQII-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|386842867|ref|YP_006247925.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374103168|gb|AEY92052.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451796159|gb|AGF66208.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 378
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 160/285 (56%), Gaps = 34/285 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 11 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + K IP++ADIHF P E +RVNPGN QF
Sbjct: 71 ADAL-----ATIAKKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 117
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 118 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDKRLLQKYGKATPEALVESA 164
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AYR L + DYPLHLGVTEAG G
Sbjct: 165 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYRQLAEQ-----CDYPLHLGVTEAGPAFQG 219
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMR 366
+KSA+ G LL G+GDTIRVSL+ PP +E+ + L +LG+R
Sbjct: 220 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEVKVGLQILQSLGLR 264
>gi|388784599|gb|AFK78072.1| XiaF [Streptomyces sp. SCSIO 02999]
Length = 383
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HP+ VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 19 RRKTRQLQVGQVGVGSDHPVSVQSMTTTVTADVNATLQQIAELTAAGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I + IP++ADIHF P E +RVNPGN
Sbjct: 79 AEALPAIA-----RKSKIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN------------ 121
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ ++ + K +G +RIG N GSL R+M YG +P + ESA
Sbjct: 122 ---------IKKFDDKVGEIARAAKDHGTPIRIGVNAGSLDARLMRKYGKATPEALAESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH S+K ++PVVM++AY +L + DYPLHLGVTEAG G
Sbjct: 173 LWEASLFAEHDFHELKISVKHNDPVVMIRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 228 TVKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGAQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 286 RAQVDVYKLADEVTAGLEGMEVPLR 310
>gi|90021081|ref|YP_526908.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharophagus degradans 2-40]
gi|123277277|sp|Q21KT3.1|ISPG_SACD2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|89950681|gb|ABD80696.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharophagus degradans 2-40]
Length = 370
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVG+VA+G + PI +Q+MT +T DV TV ++ RI GAD+VR++V
Sbjct: 9 RRKSRQIMVGDVAVGGDAPITIQSMTNTETTDVEATVAQIERIQMAGADIVRVSVPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I+ K +IPLVADIHF +ALRVA+ D +R+NPGN
Sbjct: 69 AEAFGAIR-----KRVSIPLVADIHFDYRIALRVADLGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+K + +RIG N GSL + + YG+ +P +VESA
Sbjct: 115 -------------EKRILAVVDKARDLNIPIRIGVNAGSLEKDLQTKYGEPTPDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I K DF NF S+KAS+ + V AYR L ++ + PLHLG+TEAG G
Sbjct: 162 LRHVEILDKYDFQNFKVSVKASDVFMAVAAYRKLATQI-----EQPLHLGITEAGGLRGG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++G+G LL DG+GDTIRVSL P +E+
Sbjct: 217 TVKSSVGLGMLLMDGIGDTIRVSLAADPVEEV 248
>gi|403384139|ref|ZP_10926196.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Kurthia sp.
JC30]
Length = 369
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG++ IG + + +Q+MTT T DV TV E++R+ + G +VR+ +
Sbjct: 5 THRSKTRPVRVGDLTIGGNNEVIIQSMTTTKTHDVEATVAEILRLEEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLVADIHF +AL+ E DKIR+NPGN R+ + E
Sbjct: 65 RAANALADIK-----KRIHIPLVADIHFDYKLALKAIEAGVDKIRINPGNIG-RKEKVEA 118
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+ V K G +RIG N GSL +I+ YG + GMVE
Sbjct: 119 V---------------------VNAAKAKGVPIRIGVNAGSLERKILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +EI R L
Sbjct: 213 SGTIKSAAGLGAILSKGIGNTLRISLSADPVEEIKVAREL 252
>gi|407647350|ref|YP_006811109.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardia
brasiliensis ATCC 700358]
gi|407310234|gb|AFU04135.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardia
brasiliensis ATCC 700358]
Length = 385
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 174/329 (52%), Gaps = 44/329 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 20 RRKTRQLMVGNVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRQED 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + + IP++ADIHF P A C +RVNPGN
Sbjct: 80 ADAL-----ATIARKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGN----------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRA---VRIGTNHGSLSDRIMSYYGD-SPRGM 258
I+E + E K G A +RIG N GSL R++ YG +P +
Sbjct: 123 -------------IKEFDGRVGEVAKAAGAAGIPIRIGVNAGSLDKRMLEKYGKATPEAL 169
Query: 259 VESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGE 318
VESA A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 170 VESALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----SDYPLHLGVTEAGP 224
Query: 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPF 377
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 225 AFQGTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGGQILQSLNLRPRKLE--IVSC 282
Query: 378 EEKHRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 283 PSCGRAQVDVYTLANEVSAGLEGMEVPLR 311
>gi|262066964|ref|ZP_06026576.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
periodonticum ATCC 33693]
gi|291379312|gb|EFE86830.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
periodonticum ATCC 33693]
Length = 348
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 156/275 (56%), Gaps = 34/275 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
T+ V VGN++IG +PI +Q+MT ++ DV TV ++ + G LVR+T+ + A+A
Sbjct: 2 TKVVKVGNLSIGGNNPIIIQSMTNTNSADVEATVMQINELEKAGCQLVRMTINNIKAAEA 61
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLEYTD 206
EIK K N+PLVADIHF +AL E DK+R+NPGN +D
Sbjct: 62 IKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG-----------SD 105
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
D +K +VE K+ +RIG N GS+ I+ YG +VESA
Sbjct: 106 DNVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVEALVESALYH 154
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG G +K
Sbjct: 155 VRLLEKFNFFDIIISLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQGTVK 209
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
SAIGIG LL DG+G T+RVSLTE P +EI + +
Sbjct: 210 SAIGIGALLVDGIGSTLRVSLTENPVEEIKVAKEI 244
>gi|237734410|ref|ZP_04564891.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mollicutes
bacterium D7]
gi|229382640|gb|EEO32731.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprobacillus
sp. D7]
Length = 354
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 160/278 (57%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TRT+ VGN+ IG + + +Q+MT TK++ TV+++ +A G LVR+ V +
Sbjct: 6 RNETRTIKVGNLTIGGNNEVIIQSMTNTKTKNIEATVKQINALAATGCQLVRLAVLNNDD 65
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EIK K+ +IPLVADIHF +AL+ E DKIR+NPGN E++E
Sbjct: 66 ALAIKEIK-----KHVSIPLVADIHFDYRLALQAIESGIDKIRINPGNIGSP----EKVE 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+V CKK+ +RIG N GSL I++ YG + GM+ESA
Sbjct: 117 M------------------VVNACKKHHVPIRIGVNSGSLEKDILAKYGKPTAEGMIESA 158
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ I L F++ S+K+SN ++ + AYRL +DYPLH+GVTEAG G
Sbjct: 159 KKHVEILESLGFYDICISLKSSNTLLTIAAYRL-----ASETFDYPLHIGVTEAGTKLGG 213
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KS++GIGT+L G+G+TIRVSL++ P +EI + L
Sbjct: 214 TIKSSLGIGTILYQGIGNTIRVSLSDSPLEEIKVAKIL 251
>gi|164687914|ref|ZP_02211942.1| hypothetical protein CLOBAR_01559 [Clostridium bartlettii DSM
16795]
gi|164602327|gb|EDQ95792.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
bartlettii DSM 16795]
Length = 354
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+ TR V VG+V IG +PI VQ+MT DT+DV TV ++ R+ + G D+VR+ V +
Sbjct: 5 RKMTREVRVGDVKIGGNNPISVQSMTNTDTRDVEKTVAQIKRLEEVGCDIVRVAVV---D 61
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
DA I S +++ NIP++ADIHF +AL E D IR+NPGN
Sbjct: 62 MDAAKSI--SKIKEQVNIPIIADIHFDYRLALEAIEQGVDGIRINPGNIG---------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
IE V +VEKCK+ +RIG N GSL ++ YG + +VESA
Sbjct: 110 -----------SIERV-KAVVEKCKERDLKIRIGVNGGSLEKELLKKYGSPTAEALVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFHN + S+K+S+ V+AY L+ ++ DYPLH+G+TEAG G
Sbjct: 158 MGHIKILEDLDFHNIVISLKSSDIYTAVEAYELMSQKV-----DYPLHIGITEAGGVRAG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IGIG+LL G+GDT+R+SLT P +E+
Sbjct: 213 TIKSSIGIGSLLLKGIGDTMRISLTGDPVEEV 244
>gi|167755663|ref|ZP_02427790.1| hypothetical protein CLORAM_01178 [Clostridium ramosum DSM 1402]
gi|374624955|ref|ZP_09697372.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprobacillus
sp. 8_2_54BFAA]
gi|167704602|gb|EDS19181.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
ramosum DSM 1402]
gi|373916238|gb|EHQ47986.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprobacillus
sp. 8_2_54BFAA]
Length = 351
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 160/278 (57%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TRT+ VGN+ IG + + +Q+MT TK++ TV+++ +A G LVR+ V +
Sbjct: 3 RNETRTIKVGNLTIGGNNEVIIQSMTNTKTKNIEATVKQINALAATGCQLVRLAVLNNDD 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EIK K+ +IPLVADIHF +AL+ E DKIR+NPGN E++E
Sbjct: 63 ALAIKEIK-----KHVSIPLVADIHFDYRLALQAIESGIDKIRINPGNIGSP----EKVE 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+V CKK+ +RIG N GSL I++ YG + GM+ESA
Sbjct: 114 M------------------VVNACKKHHVPIRIGVNSGSLEKDILAKYGKPTAEGMIESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ I L F++ S+K+SN ++ + AYRL +DYPLH+GVTEAG G
Sbjct: 156 KKHVEILESLGFYDICISLKSSNTLLTIAAYRL-----ASETFDYPLHIGVTEAGTKLGG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KS++GIGT+L G+G+TIRVSL++ P +EI + L
Sbjct: 211 TIKSSLGIGTILYQGIGNTIRVSLSDSPLEEIKVAKIL 248
>gi|54026089|ref|YP_120331.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardia
farcinica IFM 10152]
gi|73621100|sp|Q5YS74.1|ISPG_NOCFA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|54017597|dbj|BAD58967.1| putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Nocardia farcinica IFM 10152]
Length = 385
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 174/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+HP+ VQ+MTT T DV T++++ ++ G D+VR+ + +
Sbjct: 20 RRKTRQLMVGSVGVGSDHPVSVQSMTTTKTHDVNATLQQIAQLTASGCDIVRVACPRQED 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + K IP++ADIHF P A C +RVNPGN
Sbjct: 80 ADAL-----ATIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 123
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R++ YG +P +VES
Sbjct: 124 ----KEFDGRVKEV-------AKAAGAAGIPIRIGVNAGSLDKRMLEKYGKATPEALVES 172
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 173 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 227
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +E+ + L +L +R +L+ +
Sbjct: 228 GTIKSAVAFGALLSEGIGDTIRVSLSAPPVEEVKVGTQILQSLNLRPRKLE--IVSCPSC 285
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 286 GRAQVDVYTLANEVTAGLEGMEVPLR 311
>gi|423489465|ref|ZP_17466147.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BtB2-4]
gi|423495188|ref|ZP_17471832.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus CER057]
gi|423498018|ref|ZP_17474635.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus CER074]
gi|401151281|gb|EJQ58733.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus CER057]
gi|401161305|gb|EJQ68672.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus CER074]
gi|402431701|gb|EJV63765.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
cereus BtB2-4]
Length = 370
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ V +
Sbjct: 5 TQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIG-RRHKVE- 117
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V K+ G +RIG N GSL I+ +G + GMVE
Sbjct: 118 --------------------AVVNAAKERGIPIRIGVNAGSLERHILEKHGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|342732400|ref|YP_004771239.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|417962474|ref|ZP_12604675.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-3]
gi|417967100|ref|ZP_12608290.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-5]
gi|417968395|ref|ZP_12609420.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-co]
gi|418016187|ref|ZP_12655752.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|418372667|ref|ZP_12964759.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-mouse-SU]
gi|342329855|dbj|BAK56497.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|345506522|gb|EGX28816.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-mouse-NYU]
gi|380337562|gb|EIA26599.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-3]
gi|380338064|gb|EIA27008.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-5]
gi|380339759|gb|EIA28441.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-co]
gi|380342336|gb|EIA30781.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-mouse-SU]
Length = 349
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 157/274 (57%), Gaps = 34/274 (12%)
Query: 89 RTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADAC 148
+ V +GNV IG +PI +Q+MT +TKDV T+ ++ + +G ++VRI + +E D
Sbjct: 7 KEVRIGNVMIGGCNPIAIQSMTNTNTKDVNATINQINVLEKEGCNIVRIAITDNQEVDCI 66
Query: 149 FEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLEYTDD 207
+IK KN NIPLVADI F +AL + DK+R+NPGN +
Sbjct: 67 SKIK-----KNTNIPLVADIQFDYRIALACIKNGIDKVRINPGNIGN------------- 108
Query: 208 EYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFA 266
E+ +V C++YG +RIG N GSL I+S YG + +VESA +
Sbjct: 109 ---------EDKIREVVNACEEYGVPIRIGVNGGSLQKDILSRYGKKTTDALVESALKNV 159
Query: 267 RICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKS 326
+ K F N + S+K+S+ +M+++Y+ + + + DYPLHLGVTEAG G +KS
Sbjct: 160 DLLEKFGFRNIVISVKSSDVEMMIESYKKISSAV-----DYPLHLGVTEAGLFLSGAVKS 214
Query: 327 AIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+IGIGTLL +G+GDTIRVSLT+ P E+ + +
Sbjct: 215 SIGIGTLLHNGIGDTIRVSLTDDPVNEVKVSKEI 248
>gi|330830068|ref|YP_004393020.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii B565]
gi|406676652|ref|ZP_11083837.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AMC35]
gi|423209228|ref|ZP_17195782.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AER397]
gi|328805204|gb|AEB50403.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii B565]
gi|404617086|gb|EKB14022.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AER397]
gi|404624966|gb|EKB21783.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromonas
veronii AMC35]
Length = 371
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 156/273 (57%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RRK+R +MVGNV +G + PI VQTMT T DVA T+E++ RI GAD+VR++V
Sbjct: 9 IRRKSRQIMVGNVPVGGDAPITVQTMTNTKTTDVAATIEQIQRIERVGADIVRVSVPTME 68
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A L++ IP+VADIHF +AL+VAE D +R+NPGN +
Sbjct: 69 AAEAF-----RLIKLQTRIPIVADIHFDYRIALKVAEYGADCLRINPGNIGN-------- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+ + +RIG N GSL I YG+ +P +VES
Sbjct: 116 --------------EQRVRSVVDCARDLNIPIRIGVNGGSLEKDIQEKYGEPTPEALVES 161
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A +LDF +F S+KAS+ + V AYRLL ++ + PLHLG+TEAG
Sbjct: 162 AMRHVDYLDRLDFQDFKVSVKASDVFLAVGAYRLLAKQI-----EQPLHLGITEAGGFRA 216
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSAIG+G LL DG+GDT+R+SL P +E+
Sbjct: 217 GAVKSAIGLGMLLTDGIGDTLRISLAADPVEEV 249
>gi|170723486|ref|YP_001751174.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
putida W619]
gi|229485855|sp|B1JDV8.1|ISPG_PSEPW RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|169761489|gb|ACA74805.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas putida W619]
Length = 369
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVGQIQRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQLV-----SVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQII-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|403508255|ref|YP_006639893.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardiopsis
alba ATCC BAA-2165]
gi|402801009|gb|AFR08419.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Nocardiopsis
alba ATCC BAA-2165]
Length = 384
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +G + P+ VQ+MTT T D+ T++++ + G +VR+ V +
Sbjct: 18 RRKTRQIMVGNVPVGGDAPVSVQSMTTTRTSDINATLQQIAELTATGCQIVRVAVPTNDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA ++ K IP++ADIHF P E +RVNPGN
Sbjct: 78 ADAL-----PIIAKKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN------------ 120
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ ++ + + + + G +RIG N GSL R+++ YG +P +VESA
Sbjct: 121 ---------IKKFDDKVAEIAKAAGEAGTPIRIGVNAGSLDKRLLAKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ + F + S+K ++PVVMV AYRLL DYPLHLGVTEAG G
Sbjct: 172 LWECSLFEEHGFRDIKISVKHNDPVVMVNAYRLLS-----QACDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KS++ G LL +G+GDTIRVSL+ PP +E+ + L +LGMR L+ P
Sbjct: 227 TIKSSVAFGALLSEGIGDTIRVSLSAPPAEEVKVGAQILESLGMRERGLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 285 RAQVDVYTLAEEVTAGLEGLEVPLR 309
>gi|388257759|ref|ZP_10134938.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cellvibrio
sp. BR]
gi|387938926|gb|EIK45478.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Cellvibrio
sp. BR]
Length = 359
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/265 (43%), Positives = 151/265 (56%), Gaps = 34/265 (12%)
Query: 92 MVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEI 151
MVGNVA+G + PI VQ+MT +T DVA TVE++ RI GAD+VR++V A+A I
Sbjct: 1 MVGNVAVGGDAPISVQSMTNTETTDVAATVEQIRRIQAAGADIVRVSVPTMDAAEAFGAI 60
Query: 152 KNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQ 210
+ K IPLVADIHF +ALRVA+ D +R+NPGN
Sbjct: 61 R-----KQVTIPLVADIHFDYRIALRVADLGVDCLRINPGNIGR---------------- 99
Query: 211 KELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARIC 269
E+ +V+K + +RIG N GSL + YG+ +P +VESA I
Sbjct: 100 ------EKRIKAVVDKARDLNIPIRIGVNAGSLEKDLQKKYGEPTPDALVESALRHVEIL 153
Query: 270 RKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIG 329
+L+F+NF S+KAS+ + V AYR L + D PLHLG+TEAG G +KS+IG
Sbjct: 154 DQLNFYNFKVSVKASDVFMAVAAYRKLATLI-----DQPLHLGITEAGGLRSGTVKSSIG 208
Query: 330 IGTLLQDGLGDTIRVSLTEPPEKEI 354
+G LL DG+GDTIRVSL P +EI
Sbjct: 209 LGALLMDGIGDTIRVSLAADPVEEI 233
>gi|312621983|ref|YP_004023596.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Caldicellulosiruptor kronotskyensis 2002]
gi|312202450|gb|ADQ45777.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Caldicellulosiruptor kronotskyensis 2002]
Length = 346
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 164/289 (56%), Gaps = 38/289 (13%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
T+ + +GN+ IG PIR+Q+MT TKDV TVE+++ + G D++R+ V A A
Sbjct: 3 TKKIKIGNLYIGGGEPIRIQSMTNTKTKDVEATVEQILSLESLGCDIIRVAVPDLDSAKA 62
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLEYTD 206
+IK+ + +IPLVADIHF +AL + DKIR+NPGN D R
Sbjct: 63 ISKIKSRI-----HIPLVADIHFDYKLALEAIYNGADKIRINPGNIGDER---------- 107
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESAFEF 265
++Q I ++ K+YG AVR+G N GSL D + Y P +VE+A
Sbjct: 108 -----KVQEI-------AKEAKRYGIAVRVGANSGSLPKDILQKYKSPVPEAIVEAAIYQ 155
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
++ K DF N + S+K+SN + +++Y E+ +YPLH+G+TEAG G +K
Sbjct: 156 VKLLEKFDFDNIVVSVKSSNVLTTIRSY-----EILSQNLNYPLHVGLTEAGTFVAGTVK 210
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
S+I IG LL G+GDTIRVSLT+ PEKE+ + + +++ L++GV
Sbjct: 211 SSIAIGYLLMKGIGDTIRVSLTDSPEKEVIVAKEI----LKSLNLRKGV 255
>gi|380293401|gb|AFD50348.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, partial
[Mentha sp. MC-2012]
Length = 104
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/104 (88%), Positives = 101/104 (97%)
Query: 393 QLPIQKEGEEVDYRGVLHRDGSVLMSVSLDQLKAPELLYKSLAAKLVVGMPFKDLATVDS 452
QLP+QKEGEEVDYRGVLHRDGSVL+SV+LDQLKAPELLYKSLAAKL+VGMPFKDLATVDS
Sbjct: 1 QLPVQKEGEEVDYRGVLHRDGSVLISVTLDQLKAPELLYKSLAAKLIVGMPFKDLATVDS 60
Query: 453 ILLRELPSVDDHDARLALKRLVDISMGVITPLSEQLTKPLPHAM 496
IL+RELP DD +ARLALKRL+DISMGVITPLSEQLTKPLP+A+
Sbjct: 61 ILVRELPPQDDKNARLALKRLIDISMGVITPLSEQLTKPLPNAL 104
>gi|386759103|ref|YP_006232319.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
JS]
gi|384932385|gb|AFI29063.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
JS]
Length = 390
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 160/298 (53%), Gaps = 37/298 (12%)
Query: 65 EGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEV 124
E + + R + E H+T KTR V VG + IG + + +Q+MTT T DV TV E+
Sbjct: 5 EAATTIKERLQVSEITHRT---KTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEI 61
Query: 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183
R+A+ G +VR+ +R A+A +IK K IPLV DIHF +AL+ E D
Sbjct: 62 NRLAEAGCQIVRVACPDERAANAIADIK-----KRITIPLVVDIHFDYKLALKAIEGGAD 116
Query: 184 KIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243
KIR+NPGN R E +V+ K G +RIG N GSL
Sbjct: 117 KIRINPGNIGRR----------------------EKVEAVVKAAKDKGIPIRIGVNAGSL 154
Query: 244 SDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
RI+ YG + GMVESA +I LDFH+ + SMKAS+ + ++AY E
Sbjct: 155 EKRILEKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAA 209
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+DYPLHLG+TE+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 210 KAFDYPLHLGITESGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 267
>gi|163839397|ref|YP_001623802.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Renibacterium
salmoninarum ATCC 33209]
gi|189045793|sp|A9WR14.1|ISPG_RENSM RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|162952873|gb|ABY22388.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Renibacterium salmoninarum ATCC 33209]
Length = 391
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 34/290 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI +Q+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDSPISLQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIAKKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G ++RIG N GSL R+M YG +P +VESA
Sbjct: 124 KFDDQIKE-----------IAQAAKDHGTSIRIGVNAGSLDPRLMEKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PVVMV+AY LL +PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHDFHDFKISVKHNDPVVMVRAYELLAER-----GAWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+
Sbjct: 228 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLE 277
>gi|339495154|ref|YP_004715447.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|386021781|ref|YP_005939805.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri DSM 4166]
gi|327481753|gb|AEA85063.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri DSM 4166]
gi|338802526|gb|AEJ06358.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 370
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG VA+G + PI VQ+MT +T DV TV ++ R+A+ GAD+VR++V
Sbjct: 9 RRQSRKIWVGGVAVGGDAPISVQSMTNTETCDVEATVGQIQRLANAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QRVQLPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVDHLDRLDFQDFKVSVKASDVFMAVEAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
>gi|402776769|ref|YP_006630713.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis QB928]
gi|402481949|gb|AFQ58458.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus subtilis QB928]
Length = 390
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 161/298 (54%), Gaps = 37/298 (12%)
Query: 65 EGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEV 124
E + + R + E H+T KTR V VG + IG + + +Q+MTT T DV TV E+
Sbjct: 5 EAATTIKERLQVSEITHRT---KTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEI 61
Query: 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183
R+A+ G +VR+ +R A+A +IK K +IPLV DIHF +AL+ E D
Sbjct: 62 NRLAEAGCQIVRVACPDERAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGAD 116
Query: 184 KIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243
KIR+NPGN R E +V+ K G +RIG N GSL
Sbjct: 117 KIRINPGNIGRR----------------------EKVEAVVKAAKDKGIPIRIGVNAGSL 154
Query: 244 SDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302
RI+ YG + GMVESA +I LDFH+ + SMKAS+ + ++AY E
Sbjct: 155 EKRILEKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAA 209
Query: 303 HGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+DYPLHLG+TE+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 210 KAFDYPLHLGITESGTLFAGTVKSAAGLGAILSKGIGNTMRISLSADPVEEVKVAREL 267
>gi|319651569|ref|ZP_08005696.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
2_A_57_CT2]
gi|317396636|gb|EFV77347.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
2_A_57_CT2]
Length = 373
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 157/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR V VG + IG + + +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPVKVGPLTIGGSNELFIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A +IK + NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAIADIK-----RQINIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL RI+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAQAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|406997773|gb|EKE15792.1| hypothetical protein ACD_11C00105G0017 [uncultured bacterium]
Length = 352
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 155/271 (57%), Gaps = 33/271 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
+ V VGN+++G +P+RVQ+M DT+DV+ TV++++ + G ++VR+ V A A
Sbjct: 7 SSVVKVGNLSLGGNNPVRVQSMCNTDTRDVSATVKQILELEKAGCEIVRVAVLDMVAAKA 66
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLEYTD 206
+IKN + +IPLVADIHF +AL + + DKIR+NPGN
Sbjct: 67 IGKIKNKI-----HIPLVADIHFDYKLALEAINQGVDKIRINPGNIGS------------ 109
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFA 266
EE +V+ CKK +RIG N GSL +++ YG +P+ V SA
Sbjct: 110 ----------EEKIKAVVDACKKKKIPIRIGVNVGSLEQDLLNKYGATPKAAVASAMRHI 159
Query: 267 RICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKS 326
+I KL+F + L S+K S+ M++AY++L ++ +YPLHLGVTEAG G +K+
Sbjct: 160 KILEKLNFKDILISIKFSSVPPMIEAYQMLAKKV-----NYPLHLGVTEAGTAFMGSIKN 214
Query: 327 AIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC 357
AIG+G LL G+G TIR SLT P +E+ C
Sbjct: 215 AIGMGVLLHQGIGATIRASLTADPIEEMKTC 245
>gi|374702667|ref|ZP_09709537.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. S9]
Length = 370
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG+V +G + PI VQ+MT DT DVA TV ++ R+ + GAD+VR++V
Sbjct: 9 RRLSRKIWVGSVPVGGDSPISVQSMTNTDTNDVAATVAQIRRLEEAGADIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----QQVNLPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +VE + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVEAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 MRHVEHLDRLNFPDFKVSVKASDVFMAVAAYRLLATKI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL DG+GDTIR+SL P +EI
Sbjct: 217 TVKSAVGLGMLLADGIGDTIRISLAADPVEEI 248
>gi|419718113|ref|ZP_14245449.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnoanaerobaculum saburreum F0468]
gi|383305714|gb|EIC97063.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnoanaerobaculum saburreum F0468]
Length = 352
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 169/296 (57%), Gaps = 35/296 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R KTR V +G+ IG+ +PI +Q+M T+DV TVE+++R+ D G D++R+ V
Sbjct: 1 MRNKTRLVQIGDKKIGAGNPILIQSMCNTKTEDVDATVEQILRLEDAGCDIIRVAVPSSE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQL 202
A A +IK K +IPLVADIHF +AL + DKIR+NPGN +
Sbjct: 61 AALAIAKIK-----KQIHIPLVADIHFDYRLALEAIKSGCDKIRINPGNIGSK------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E +V+ CK+ +R+G N GSL ++ YG + +G+VES
Sbjct: 109 ---------------ERIKAVVDACKERNLPIRVGVNSGSLEKNLIEKYGGVTAKGIVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + +I +D++N + S+K+S+ ++ V+A+ L+ E DYPLH+G+TE+G +
Sbjct: 154 ALDKVKIIEDMDYNNLVISIKSSDVLMCVKAHELISKE-----TDYPLHVGITESGTVKR 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
G +KS++G+G +L G+GDT+RVSLT P +EI + L NLG+R ++ P
Sbjct: 209 GMIKSSLGLGIILYQGIGDTVRVSLTGDPVEEIFAGKLILNNLGLRNGGIEVVSCP 264
>gi|408829170|ref|ZP_11214060.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
somaliensis DSM 40738]
Length = 384
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 154/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +++ + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----AVIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+ S+K ++PVVMV AYR L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHGFHDIKISVKHNDPVVMVNAYRQLAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL +G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLAEGIGDTIRVSLSAPPAEEV 258
>gi|441513539|ref|ZP_20995368.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
amicalis NBRC 100051]
gi|441451648|dbj|GAC53329.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
amicalis NBRC 100051]
Length = 395
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 27 RRKTRQLFVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN + + +++
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNIKEFDGRVKEV 140
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E G +RIG N GSL RI+ YG +P +VES
Sbjct: 141 AKAAGEA---------------------GIPIRIGVNAGSLDKRILQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLE--IVSCPSC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGMEVPLR 318
>gi|409425605|ref|ZP_11260189.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. HYS]
Length = 369
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT DT DVA TV ++ R+ D G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQINRLVDAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----QRVSVPLVADIHFDYRIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ PLHLG+TEAG G
Sbjct: 162 MRHVEHLDRLDFQDFKVSVKASDVFMAVEAYRLLAKQII-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|350266707|ref|YP_004878014.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. spizizenii TU-B-10]
gi|349599594|gb|AEP87382.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. spizizenii TU-B-10]
Length = 375
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVQAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTMRISLSADPVEEVKVAREL 252
>gi|374710856|ref|ZP_09715290.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, partial
[Sporolactobacillus inulinus CASD]
Length = 365
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 153/280 (54%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T+DVA TVE++ R+ + G LVR+
Sbjct: 5 THRTKTRKVKVGNLTIGGSNEVIIQSMTTTKTRDVASTVEQIHRLEEAGCQLVRVACPTM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
+A A EIK K IPLV DIHF +AL+ E DKIR+NPGN
Sbjct: 65 EDALAIPEIK-----KQIKIPLVVDIHFNYKLALKAIEGGADKIRINPGNIGK------- 112
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+E +V K+ +RIG N GSL I+ YG + GMVE
Sbjct: 113 ---------------QENVEAVVRAAKEKHIPIRIGVNAGSLERHILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + S+KASN + V+AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSLKASNIHLAVEAY-----EKAARTFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G LL G+G+T+R+SL+ P +E+ CR L
Sbjct: 213 SGTIKSAAGLGILLNKGIGNTMRISLSADPVEEVKVCREL 252
>gi|400131653|emb|CCH63729.1| XiaC protein [Streptomyces sp. HKI0576]
Length = 383
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HP+ VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 19 RRKTRQLQVGPVGVGSDHPVSVQSMTTTVTADVNATLQQIAELTAAGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I + IP++ADIHF P E +RVNPGN
Sbjct: 79 AEALPAIA-----RKSKIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN------------ 121
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ ++ + K +G +RIG N GSL R+M YG +P + ESA
Sbjct: 122 ---------IKKFDDKVGEIARAAKDHGTPIRIGVNAGSLDARLMRKYGKATPEALAESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH S+K ++PVVM++AY +L + DYPLHLGVTEAG G
Sbjct: 173 LWEASLFAEHDFHELKISVKHNDPVVMIRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 228 TVKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGAQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 286 RAQVDVYKLADEVTAGLEGMEVPLR 310
>gi|340749921|ref|ZP_08686768.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
mortiferum ATCC 9817]
gi|229419564|gb|EEO34611.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
mortiferum ATCC 9817]
Length = 355
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 152/275 (55%), Gaps = 34/275 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
+R V VGN+ IG +PI +Q+MT T DV TV ++ ++ G +VR+T+ + A A
Sbjct: 2 SRVVKVGNLLIGGGNPIVIQSMTNTTTSDVEATVNQIKKLEAAGCQMVRMTINNEEAAKA 61
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLEYTD 206
EIK K ++PL ADIHF +AL E DK+R+NPGN
Sbjct: 62 IGEIK-----KRVDVPLCADIHFDYKLALLAIENGIDKLRINPGNIGS------------ 104
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
+E +VEK K+ +RIG N GS+ I+ YG + GMVESA
Sbjct: 105 ----------DENIKAVVEKAKEKNIPIRIGVNSGSIEKHILEKYGKPTADGMVESAMYH 154
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
+ K F++ + S+KASN +MV+AYR + + DYPLHLGVTEAG G +K
Sbjct: 155 INLLEKNGFNDIVVSLKASNVKMMVEAYRKISKLI-----DYPLHLGVTEAGTAFQGTVK 209
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
SAIGIG LL DG+GDTIRVSLTE P +EI + +
Sbjct: 210 SAIGIGALLVDGIGDTIRVSLTEDPVEEIKVAKEI 244
>gi|383819617|ref|ZP_09974886.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
phlei RIVM601174]
gi|383336394|gb|EID14793.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
phlei RIVM601174]
Length = 382
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 147/273 (53%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV IGS+HPI VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 18 RRKTRQLMVGNVGIGSDHPIAVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP++ADIHF P A C +RVNPGN + + +++
Sbjct: 78 ADALAEIA-----RHSQIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNIKEFDGRVKEV 131
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
G +RIG N GSL R M YG +P +VES
Sbjct: 132 AKAA---------------------AAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K S+PVVMV AY EM DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFGDIKISVKHSDPVVMVAAY-----EMLAEKCDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSKGIGDTIRVSLSAPPAEEV 258
>gi|296333335|ref|ZP_06875788.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675160|ref|YP_003866832.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296149533|gb|EFG90429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305413404|gb|ADM38523.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 375
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVQAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|302558079|ref|ZP_07310421.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
griseoflavus Tu4000]
gi|302475697|gb|EFL38790.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
griseoflavus Tu4000]
Length = 385
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKTRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----ATIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P + ESA
Sbjct: 125 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEV 258
>gi|260905201|ref|ZP_05913523.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Brevibacterium linens BL2]
Length = 382
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+ P+ VQ+MTT T D+ GT++++ + G D+VR+ +
Sbjct: 19 RRKTRQIQVGKVGVGSDFPVSVQSMTTTQTTDINGTLQQIAELTAAGCDIVRVACPSPDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A ++ + IP++ADIHF P V + +RVNPGN +
Sbjct: 79 AAAL-----PVIAQKSQIPVIADIHFQPKYVYAAIDAGCGAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + G ++RIG N GSL RIM YG +P +VESA
Sbjct: 124 KFDDQVKQ-----------IAKAANDAGTSIRIGVNAGSLDKRIMEKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PVVMV+AY LL D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHDFHDFKISVKHNDPVVMVRAYELLAER-----GDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G+LL G+GDTIRVSL+ PP +EI
Sbjct: 228 TIKSATAFGSLLSQGIGDTIRVSLSAPPVEEI 259
>gi|365831282|ref|ZP_09372834.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprobacillus
sp. 3_3_56FAA]
gi|365261759|gb|EHM91660.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprobacillus
sp. 3_3_56FAA]
Length = 347
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/278 (40%), Positives = 162/278 (58%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TRT+ VGN+ IG + + +Q+MT TK++ TV+++ +A G LVR+ V +
Sbjct: 3 RNETRTIKVGNLTIGGNNEVIIQSMTNTKTKNIEATVKQINALAATGCQLVRLAVLNNDD 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EIK K+ +IPLVADIHF +AL+ E DKIR+NPGN E++E
Sbjct: 63 ALAIKEIK-----KHVSIPLVADIHFDYRLALQAIESGIDKIRINPGNIGSP----EKVE 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+V CKK+ +RIG N GSL I++ YG + GM+ESA
Sbjct: 114 M------------------VVNACKKHHVPIRIGVNSGSLEKDILAKYGKPTAEGMIESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ I L F++ S+K+SN ++ + AYRL +E + DYPLH+GVTEAG G
Sbjct: 156 KKHVEILESLGFYDICISLKSSNTLLTIAAYRL-ASETF----DYPLHIGVTEAGTKLGG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KS++GIGT+L G+G+TIRVSL++ P +EI + L
Sbjct: 211 TIKSSLGIGTILYQGIGNTIRVSLSDSPLEEIKVAKIL 248
>gi|392537190|ref|ZP_10284327.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas marina mano4]
Length = 372
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----SIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
>gi|294501265|ref|YP_003564965.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
megaterium QM B1551]
gi|295706612|ref|YP_003599687.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
megaterium DSM 319]
gi|294351202|gb|ADE71531.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
megaterium QM B1551]
gi|294804271|gb|ADF41337.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
megaterium DSM 319]
Length = 370
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 157/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR V VG++ IG + + +Q+MTT T DV TV E+ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPVKVGDLTIGGSNELVIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R ADA EIK K NIPLV DIHF +AL+ E DKIR+NPGN RR
Sbjct: 60 ACPDERAADAIPEIK-----KRINIPLVVDIHFDYRLALKAIEGGADKIRINPGNIG-RR 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
+ E + V K +RIG N GSL RI+ YG +
Sbjct: 114 EKVEAV---------------------VNAAKAKNIPIRIGVNAGSLEKRILDKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAQAFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|347753190|ref|YP_004860755.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
coagulans 36D1]
gi|347585708|gb|AEP01975.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
coagulans 36D1]
Length = 369
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 159/288 (55%), Gaps = 37/288 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH+T KTR V VGN+ IG + + +Q+MTT T DV TV ++ R+ + G +VR+
Sbjct: 3 EIIHRT---KTRPVKVGNLTIGGSNELFIQSMTTTKTHDVDATVRQIERLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
V +R A A +IK K +IPLVADIHF +AL E DKIR+NPGN R
Sbjct: 60 AVPDERAARAIPDIK-----KRIHIPLVADIHFDYRLALIAIEGGVDKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL I+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKPILQKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIRILEDLDFHDIIVSMKASDVRLAIEAY-----EKAARTFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANL 363
+G G +KSA GIGTLL G+G+T+R+SL+ P +E+ R L +
Sbjct: 208 SGTLFSGTIKSAAGIGTLLNMGIGNTLRISLSADPVEEVKVARELLKI 255
>gi|359768033|ref|ZP_09271813.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
polyisoprenivorans NBRC 16320]
gi|378717535|ref|YP_005282424.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
polyisoprenivorans VH2]
gi|359314610|dbj|GAB24646.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
polyisoprenivorans NBRC 16320]
gi|375752238|gb|AFA73058.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG [Gordonia
polyisoprenivorans VH2]
Length = 402
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ ++ G D+VR+ +
Sbjct: 34 RRKTRQIQVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAQLTASGCDIVRVACPRNED 93
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 94 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 137
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RIMS YG +P +VES
Sbjct: 138 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRIMSKYGKATPEALVES 186
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 187 ALWEAGLFEEHGFGDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 241
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KS++ G LL G+GDTIRVSL+ PP +E+ + L +L +R +L+ +
Sbjct: 242 GTIKSSVAFGALLSQGIGDTIRVSLSAPPAEEVKVGDQILQSLNLRPRKLE--IVSCPSC 299
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + + EG EV R
Sbjct: 300 GRAQVDVYKLADAVTAGLEGMEVPLR 325
>gi|383828492|ref|ZP_09983581.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora xinjiangensis XJ-54]
gi|383461145|gb|EID53235.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora xinjiangensis XJ-54]
Length = 383
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 151/275 (54%), Gaps = 39/275 (14%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGSVGVGSDHPISVQSMTTTVTADINATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN---FADRRAQFE 200
A+A I IP++ADIHF P E +RVNPGN F DR A+
Sbjct: 78 AEALPAIA-----AKSKIPVIADIHFQPKYVFAAIEAGCAGVRVNPGNIKKFDDRVAE-- 130
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMV 259
+ + K +G +RIG N GSL R++ YG +P +
Sbjct: 131 ----------------------IAKAAKDHGTPIRIGVNAGSLDPRLLKKYGKATPEALA 168
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG
Sbjct: 169 ESALWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPA 223
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL+ G+GDTIRVSL+ PP +E+
Sbjct: 224 FQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVEEV 258
>gi|284030948|ref|YP_003380879.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Kribbella
flavida DSM 17836]
gi|283810241|gb|ADB32080.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Kribbella
flavida DSM 17836]
Length = 383
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 173/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +G + P+ VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 18 RRKTRQIKVGKVLVGGDAPVSVQSMTTTLTSDVNSTLQQIAELTAAGCDIVRVACPSQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +I ++ IP++ADIHF P E +RVNPGN +
Sbjct: 78 ADALPQIA-----QHSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G ++RIG N GSL R++ YG +P +VESA
Sbjct: 123 KFDDQVKE-----------IAAAAKDHGTSIRIGVNAGSLDPRLLKKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PVVMV+AY LL D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHDFHDFKISVKHNDPVVMVKAYELLAER-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KS++ G LL G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSSVAFGALLSKGIGDTIRVSLSAPPVEEVKVGLQILQSLNLRERKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 285 RAQVDVYTLAEQVTAGLEGMEVPLR 309
>gi|160944141|ref|ZP_02091371.1| hypothetical protein FAEPRAM212_01643 [Faecalibacterium prausnitzii
M21/2]
gi|158444817|gb|EDP21821.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Faecalibacterium prausnitzii M21/2]
gi|295105057|emb|CBL02601.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Faecalibacterium prausnitzii SL3/3]
Length = 348
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/274 (40%), Positives = 153/274 (55%), Gaps = 34/274 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+K R V +GNV IG +PI VQTM +D+ G V + R G ++R+T
Sbjct: 1 MRQKKREVKIGNVTIGGSNPIAVQTMLNVPVEDIEGNVAQAKRCEAAGCQILRVTCPSPA 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+A +KN++ NIP+VADIHF AL A+ DKIR+NPGN D
Sbjct: 61 DAKCIEAVKNAV-----NIPIVADIHFDYKAALACADVGVDKIRINPGNIGD-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
DD + +V+ C++ +RIG N GSL I++ YG +P MVES
Sbjct: 108 ---DDRVKA-----------VVDACQQKNIPIRIGVNGGSLEKHILARYGAPTPEAMVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K DF+N + S+K SN M++AYR L A DYPLH+GVTEAG +
Sbjct: 154 ALYHVRLLEKFDFNNIVISIKNSNVPRMMEAYRQLSAV-----TDYPLHVGVTEAGTYQM 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID 355
G +KS +GIG +L +G+GDTIRVSL PEKE++
Sbjct: 209 GLLKSGMGIGGMLLEGIGDTIRVSLAAEPEKEVE 242
>gi|421074514|ref|ZP_15535545.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans JBW45]
gi|392527385|gb|EIW50480.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pelosinus
fermentans JBW45]
Length = 359
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 185/369 (50%), Gaps = 61/369 (16%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR T V VG V +G PI VQ+MT T DVA TV ++M++ G D+VR+ V
Sbjct: 7 RRMTNPVYVGKVMVGGTAPISVQSMTNTKTDDVADTVAQIMQLGSAGCDIVRLAVPDMSA 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A EIK+ + IPL+ADIHF +A+ E D +R+NPGN A
Sbjct: 67 ALAIKEIKSKV-----QIPLIADIHFDYRLAIAAMENGVDALRINPGNIA---------- 111
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD--SPRGMVES 261
E H+ + +V++ KK +RIG N GSL I+ YG +P GMVES
Sbjct: 112 --------EANHV----AIIVKEAKKRSIPIRIGVNAGSLEKSILEKYGGHPTPAGMVES 159
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + I KL+F + S+KA++ + + AYRL+ + +YPLHLG+TEAG +
Sbjct: 160 AMQHIAILEKLEFRDIKVSLKANDVPMTINAYRLMSETV-----NYPLHLGITEAGTIKS 214
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRA------------- 367
G +KSA+GIG LL G+GDTIRVSLT P +EI L +LG+R
Sbjct: 215 GMIKSAVGIGALLAQGIGDTIRVSLTGDPVEEIKAANEILKSLGLREYGPTLISCPTCGR 274
Query: 368 -----AELQQGVAPFEEKHRHYFDFQRRSGQLPIQKEGEEVDY-------RGVLHRDGSV 415
AE+ + V + R F + E +E D +G++ R G +
Sbjct: 275 CNINLAEIAEQVEQKLSQVRKPFKVAVMGCVVNGPGEAKEADVGIAGGKGQGLVFRKGEI 334
Query: 416 LMSVSLDQL 424
+ VS DQL
Sbjct: 335 VKRVSEDQL 343
>gi|119471075|ref|ZP_01613634.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alteromonadales bacterium TW-7]
gi|359447942|ref|ZP_09237500.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20480]
gi|119445915|gb|EAW27196.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Alteromonadales bacterium TW-7]
gi|358046261|dbj|GAA73749.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20480]
Length = 372
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----SIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
>gi|87118477|ref|ZP_01074376.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinomonas
sp. MED121]
gi|86166111|gb|EAQ67377.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinomonas
sp. MED121]
Length = 370
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 158/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R +MVG+VA+G PI VQ+MT +T DV TV ++ IAD GAD+VR+++
Sbjct: 9 RRQSRQIMVGDVAVGGGAPISVQSMTNTETCDVDATVAQIRAIADAGADIVRVSIPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A +I+ + + PLVADIHF +AL+VAE D +R+NPGN +
Sbjct: 69 AEAFKKIRQEV-----STPLVADIHFDYKIALKVAEYGVDCLRINPGNIGSK-------- 115
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V+ + +G +RIG N GSL + YG+ +P +VESA
Sbjct: 116 --------------ERIRSVVDAARHHGIPIRIGVNAGSLEKDLQKKYGEPTPDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
F +LDF F S+KAS+ + V+AYR + +++ D PLHLG+TEAG G
Sbjct: 162 FRQIGFFDELDFQEFKLSLKASDIFMTVEAYRKIASQI-----DNPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDT+RVSL P +EI
Sbjct: 217 TVKSSIGLGMLLMDGIGDTLRVSLAADPVQEI 248
>gi|375094100|ref|ZP_09740365.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora marina XMU15]
gi|374654833|gb|EHR49666.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora marina XMU15]
Length = 380
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 170/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GSEHPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGPVGVGSEHPISVQSMTTTVTADVNATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I K IP++ADIHF P E +RVNPGN
Sbjct: 78 AEALPAIA-----KKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN------------ 120
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ ++ + + +G +RIG N GSL R+++ YG +P + ESA
Sbjct: 121 ---------IKKFDDKVAEIARAASDHGTPIRIGVNAGSLDKRLLAKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+ S+K ++PVVM++AY LL + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHGFHDLKISVKHNDPVVMIRAYELLAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGAQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ +G EV R
Sbjct: 285 RAQVDVYKLADEVTAGLQGMEVPLR 309
>gi|315123116|ref|YP_004065122.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. SM9913]
gi|315016876|gb|ADT70213.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. SM9913]
Length = 372
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----SIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
>gi|443623736|ref|ZP_21108228.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Streptomyces viridochromogenes Tue57]
gi|443342734|gb|ELS56884.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Streptomyces viridochromogenes Tue57]
Length = 378
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 11 RRKSRQIQVGTVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + + IP++ADIHF P E +RVNPGN QF
Sbjct: 71 ADAL-----ATIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 117
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 118 --DDKVKE-----------IARAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 164
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AYR L A+ DYPLHLGVTEAG G
Sbjct: 165 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 219
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 220 TIKSAVAFGALLSQGIGDTIRVSLSAPPAEEV 251
>gi|452856271|ref|YP_007497954.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|452080531|emb|CCP22294.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 375
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|359420931|ref|ZP_09212862.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
araii NBRC 100433]
gi|358243204|dbj|GAB10931.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
araii NBRC 100433]
Length = 376
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 152/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VGNV +GSE PI VQ+MTT T DV T++++ ++ G D+VR+ + +
Sbjct: 12 RRKTRQIRVGNVGVGSESPISVQSMTTTKTHDVNATLQQIAQLTASGCDIVRVACPRQED 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A EI + NIP++ADIHF P A C +RVNPGN
Sbjct: 72 AEALPEIA-----RKANIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 116 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRMMEKYGKATPEALVES 164
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 165 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 219
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA G LL +G+GDTIRVSL+ PP +EI
Sbjct: 220 GTIKSATAFGALLSEGIGDTIRVSLSAPPVEEI 252
>gi|422339665|ref|ZP_16420623.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
nucleatum subsp. polymorphum F0401]
gi|355370808|gb|EHG18187.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length = 357
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 158/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V V ++ IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVADLKIGGNNPIIIQSMTNTNSADVEATVKQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KKVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ YG +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHVRLLEKFEFFDIIISLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKEI 247
>gi|452990821|emb|CCQ97942.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Clostridium ultunense Esp]
Length = 354
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 160/288 (55%), Gaps = 35/288 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TR V VG V IG + + +Q+MTT DT+DV T+ ++ ++AD G +VR+ V +
Sbjct: 4 REETRPVYVGGVQIGGQSSVVIQSMTTTDTRDVKATLAQIEQLADAGCQIVRLAVVNQDA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+ EIK K +P+VADIHF +AL+ E DKIR+NPGN +
Sbjct: 64 AEKLAEIK-----KGSPLPIVADIHFDYKLALKALESGVDKIRINPGNIGSK-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +VE CK+ G +RIG N GS+ R++ YG SP +VESA
Sbjct: 111 --------------EKTKAVVEACKERGVPIRIGVNSGSVEKRLLEKYGYPSPEAIVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I L F++ + S+K+S+ M++ Y L+ + +YPLH+GVTEAG G
Sbjct: 157 MNHVEILEDLGFYDIVVSLKSSDVPTMIKTYTLMAEK-----RNYPLHVGVTEAGTAYAG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAE 369
+KSA+GIGT+L G+GDTIRVSL P +EI + L +L + A E
Sbjct: 212 GIKSAVGIGTVLAMGIGDTIRVSLAADPLEEIKVAKNILKSLNLAATE 259
>gi|254304072|ref|ZP_04971430.1| isoprenoid biosynthesis protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148324264|gb|EDK89514.1| isoprenoid biosynthesis protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 357
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 158/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V V ++ IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVADLKIGGNNPIIIQSMTNTNSADVEATVKQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KKVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ YG +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHVRLLEKFEFFDIIISLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKEI 247
>gi|443631801|ref|ZP_21115981.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
gi|443347916|gb|ELS61973.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
Length = 376
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTMRISLSADPVEEVKVAREL 252
>gi|403668233|ref|ZP_10933509.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Kurthia sp.
JC8E]
Length = 369
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG++ IG + + +Q+MTT T DV TV E++R+ + G +VR+ +
Sbjct: 5 THRTKTRPVRVGDLTIGGNNEVIIQSMTTTKTHDVEATVAEILRLEEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLVADIHF +AL+ + DKIR+NPGN +
Sbjct: 65 RAANALADIK-----KQIHIPLVADIHFDYKLALKAIDAGVDKIRINPGNIGRK------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V K G +RIG N GSL +I+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVNAAKAKGVPIRIGVNAGSLERKILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAARAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +EI R L
Sbjct: 213 SGTIKSAAGLGAILSKGIGNTLRISLSADPVEEIKVAREL 252
>gi|384266118|ref|YP_005421825.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387899139|ref|YP_006329435.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens Y2]
gi|380499471|emb|CCG50509.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387173249|gb|AFJ62710.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens Y2]
Length = 375
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|392552321|ref|ZP_10299458.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas spongiae UST010723-006]
Length = 372
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK++ + VGNV IG PI VQ+MT +T DVA TV ++ I GAD+VR++V
Sbjct: 9 RRKSKRIYVGNVPIGDGAPIAVQSMTNTETTDVAATVAQINAIQAAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK + +IPLVADIHF +AL+VAE D +R+NPGN
Sbjct: 69 AEAFKEIKQQV-----DIPLVADIHFDYRIALKVAEYGADCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ ++ +RIG N GSL I YG+ +P ++ESA
Sbjct: 115 -------------EERIQAVVDAAREKNIPIRIGVNGGSLERDIQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I ++L+F NF S+KAS+ + V AYRLL E+ + PLHLG+TEAG G
Sbjct: 162 MRHVNILKRLNFDNFKVSVKASDVFLAVGAYRLLAKEI-----EQPLHLGITEAGGFRAG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
>gi|402297283|ref|ZP_10817056.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
alcalophilus ATCC 27647]
gi|401727440|gb|EJT00629.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
alcalophilus ATCC 27647]
Length = 367
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + +Q+MTT T DV TV E++R+ + G +VR+
Sbjct: 5 THRTKTRPVKVGNLTIGGNDEVIIQSMTTTKTHDVEATVAEILRLEEAGCQIVRVACPDM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK + NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAAEAIADIKARI-----NIPLVVDIHFDYKLALKAIESGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL +I+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLERKIVEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVHLAIEAY-----EKAAQAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +EI R L
Sbjct: 213 AGTVKSAAGLGAILNMGIGNTMRISLSADPVEEIKVAREL 252
>gi|126668580|ref|ZP_01739534.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinobacter
sp. ELB17]
gi|126626985|gb|EAZ97628.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinobacter
sp. ELB17]
Length = 372
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 152/272 (55%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI VQ+MT +T DV T+ ++ + D GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPIAVQSMTNTETCDVEATLGQIQALQDAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I+ +PLVADIHF +ALRVAE D IR+NPGN
Sbjct: 69 AEAFGRIR-----ARAGVPLVADIHFDYKIALRVAELGVDCIRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ S ++ C+ +RIG N GSLS + YG+ + +VESA
Sbjct: 115 -------------EDRISAVISACRDRNIPIRIGVNAGSLSKDLQRKYGEPNADALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I + DF NF S+KAS + V+AYR + ++ D PLHLG+TEAG G
Sbjct: 162 MRNVDILDRHDFQNFKVSLKASEVFMTVEAYRKIATQI-----DQPLHLGITEAGGFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDTIRVSL P +EI
Sbjct: 217 TVKSSIGLGLLLMDGIGDTIRVSLAADPVQEI 248
>gi|29828189|ref|NP_822823.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
avermitilis MA-4680]
gi|50400993|sp|Q82ML3.1|ISPG2_STRAW RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
2; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase 2
gi|29605291|dbj|BAC69358.1| putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Streptomyces avermitilis MA-4680]
Length = 385
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 173/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG +A+G P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 19 RRVSRQIQVGPLAVGGTAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +++ + IP+VADIHF P E +RVNPGN QF
Sbjct: 79 ADAL-----AVIARKSQIPVVADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 125
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K++G +RIG N GSL R++ YG +P +VESA
Sbjct: 126 --DDKVKE-----------IARAAKEHGTPIRIGVNAGSLDRRLLEKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV AYR L A+ DYPLHLGVTEAG G
Sbjct: 173 LWEASLFEEHDFRDIKISVKHNDPVVMVNAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL +G+GDTIRVSL+ PP +EI + L +LG+R L+ P
Sbjct: 228 TIKSAVAFGALLSEGIGDTIRVSLSAPPVEEIKVGIQILESLGLRQRRLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 286 RAQVDVYKLAEEVTAGLEGMEVPLR 310
>gi|386749721|ref|YP_006222928.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
cetorum MIT 00-7128]
gi|384555964|gb|AFI04298.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
cetorum MIT 00-7128]
Length = 358
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +GNVAIG + PI VQ+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGNVAIGGDAPISVQSMTFSKTADIKSTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL +E D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIASESVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGATPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ DF NF S+KAS+ +QAYR+L + +YP HLGVTEAG +
Sbjct: 158 NAKLLEDFDFTNFKISLKASDVERTMQAYRMLRPLV-----NYPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|154686768|ref|YP_001421929.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens FZB42]
gi|375363039|ref|YP_005131078.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|385265503|ref|ZP_10043590.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
5B6]
gi|394992094|ref|ZP_10384887.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
916]
gi|429505915|ref|YP_007187099.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|451346287|ref|YP_007444918.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens IT-45]
gi|166216865|sp|A7Z6S2.1|ISPG_BACA2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|154352619|gb|ABS74698.1| IspG [Bacillus amyloliquefaciens FZB42]
gi|371569033|emb|CCF05883.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|385149999|gb|EIF13936.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
5B6]
gi|393807110|gb|EJD68436.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
916]
gi|429487505|gb|AFZ91429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|449850045|gb|AGF27037.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens IT-45]
Length = 375
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|422317107|ref|ZP_16398473.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
periodonticum D10]
gi|404590212|gb|EKA92670.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
periodonticum D10]
Length = 351
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 157/275 (57%), Gaps = 34/275 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
TR V VGN++IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ + A+A
Sbjct: 2 TRIVKVGNLSIGGNNPIIIQSMTNTNSADVEATVKQINELEKAGCQLVRMTINNVKAAEA 61
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLEYTD 206
EIK K N+PLVADIHF +AL E DK+R+NPGN +D
Sbjct: 62 IKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG-----------SD 105
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
+ +K +VE K+ +RIG N GS+ I+ YG +VESA
Sbjct: 106 ENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVEALVESALYH 154
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG G +K
Sbjct: 155 VRLLEKYNFFDIVISLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQGTVK 209
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
SAIGIG LL DG+G T+RVSLTE P +EI + +
Sbjct: 210 SAIGIGALLVDGIGATLRVSLTENPVEEIKVAKEI 244
>gi|408528941|emb|CCK27115.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1
[Streptomyces davawensis JCM 4913]
Length = 385
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 154/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRQSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA S + + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----STIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AY+ L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYKQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPAEEV 258
>gi|268315853|ref|YP_003289572.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Rhodothermus marinus DSM 4252]
gi|345302143|ref|YP_004824045.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodothermus
marinus SG0.5JP17-172]
gi|262333387|gb|ACY47184.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Rhodothermus marinus DSM 4252]
gi|345111376|gb|AEN72208.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodothermus
marinus SG0.5JP17-172]
Length = 371
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/273 (41%), Positives = 156/273 (57%), Gaps = 34/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R VMVGNV IG PI VQ+MTT T DV T+ ++ ++A+ GAD+VR+ V +
Sbjct: 5 RRWSRPVMVGNVQIGGGAPISVQSMTTTKTHDVEATLAQIRQLAEAGADIVRVAVPRPED 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +I VQ + +P+VADIHF AL+ E K+R+NPGN
Sbjct: 65 AEALRDI----VQGS-PVPIVADIHFNYQYALKAIEAGVAKVRINPGNIGK--------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+E+++E+ + K+ G +RIG N GSL ++ YG P + ESA
Sbjct: 111 ---EEWEREV----------LLAAKEKGIPIRIGVNSGSLERDLLDKYGYPKPEALFESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
ICRK F + + S+K S+ M+QAYRL+ D+PLHLGVTEAG G
Sbjct: 158 MRHVEICRKHGFEDIVISVKHSDVYYMIQAYRLIAERT-----DFPLHLGVTEAGSFVSG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID 355
+KSAIGIG LL +G+GDTIRVSL P KE++
Sbjct: 213 SIKSAIGIGALLAEGIGDTIRVSLATDPVKEVE 245
>gi|315651644|ref|ZP_07904655.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnoanaerobaculum saburreum DSM 3986]
gi|315486098|gb|EFU76469.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnoanaerobaculum saburreum DSM 3986]
Length = 352
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 170/296 (57%), Gaps = 35/296 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+KTR V +G+ IG+ +PI +Q+M T+DV TV++++R+ D G D++R+ V
Sbjct: 1 MRKKTRLVQIGDKKIGAGNPILIQSMCNTKTEDVDATVKQILRLEDAGCDIIRVAVPSSE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQL 202
A A +IK K +IPLVADIHF +AL + DKIR+NPGN +
Sbjct: 61 AALAIAKIK-----KQIHIPLVADIHFDYRLALEAIKSGCDKIRINPGNIGSK------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E +V+ CK+ +R+G N GSL ++ YG + +G+VES
Sbjct: 109 ---------------ERIKAVVDACKERNLPIRVGVNSGSLEKNLIEKYGGVTAKGIVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + +I +D++N + S+K+S+ ++ V+A+ L+ E DYPLH+G+TE+G +
Sbjct: 154 ALDKVKIIEDMDYNNLVISIKSSDVLMCVKAHELISKE-----TDYPLHVGITESGTVKR 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
G +KS++G+G +L G+GDT+RVSLT P +EI + L NLG+R ++ P
Sbjct: 209 GMIKSSLGLGIILYQGIGDTVRVSLTGDPVEEIFAGKLILNNLGLRNGGIEVVSCP 264
>gi|392535667|ref|ZP_10282804.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas arctica A 37-1-2]
Length = 372
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
>gi|332534672|ref|ZP_08410503.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudoalteromonas haloplanktis ANT/505]
gi|332035884|gb|EGI72366.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudoalteromonas haloplanktis ANT/505]
Length = 372
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
>gi|19703813|ref|NP_603375.1| GcpE protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296327834|ref|ZP_06870371.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|22095779|sp|Q8RG40.1|ISPG_FUSNN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|19713961|gb|AAL94674.1| GcpE protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296155048|gb|EFG95828.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 354
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 158/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V V N+ IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVANLKIGGNNPIIIQSMTNTNSADVEATVKQINNLEKVGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVAL-RVAECFDKIRVNPGNFADRRAQFEQL 202
A+A EIK K ++PLVADIHF +AL + DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KKVSLPLVADIHFDYRLALLAIKNGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ YG +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K DF + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFDFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKEI 247
>gi|291454464|ref|ZP_06593854.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
albus J1074]
gi|359148644|ref|ZP_09181768.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. S4]
gi|421741564|ref|ZP_16179753.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Streptomyces sp. SM8]
gi|291357413|gb|EFE84315.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
albus J1074]
gi|406690020|gb|EKC93852.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Streptomyces sp. SM8]
Length = 384
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 154/273 (56%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA +++ K IP++ADIHF P A C +RVNPGN QF
Sbjct: 78 ADAL-----AVIAKKSQIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGNIK----QF--- 124
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
DD+ ++ + E +P +RIG N GSL R++ YG +P +VES
Sbjct: 125 ---DDKVREIAKAANETRTP-----------IRIGVNAGSLDKRLLQKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + FH+ S+K ++PVVMV AYR L A DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFHDIKISVKHNDPVVMVNAYRQLAA-----ASDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL +G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEV 258
>gi|34763966|ref|ZP_00144859.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27886257|gb|EAA23540.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 354
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 157/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVGNLKIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVAL-RVAECFDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL + DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLSIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYTKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFEFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIGTLL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTIKSAIGIGTLLVDGIGDTLRVSLTENPVEEIKVAKEI 247
>gi|374857395|dbj|BAL60248.1| (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [uncultured
candidate division OP1 bacterium]
Length = 358
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 179/323 (55%), Gaps = 39/323 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR ++ V VG + +G +PI VQ+MTT DT+DV TV ++ R+ G +LVR+ V
Sbjct: 7 RRVSKEVRVGPLKLGGTNPIVVQSMTTTDTRDVEATVRQIKRLEQAGCELVRVAVLNMDA 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+ IK K +IPLVADIHF +AL+ E DK+R+NPGN DR A+ EQ+
Sbjct: 67 ANQLAAIK-----KRISIPLVADIHFDHRLALKAIEQGVDKLRLNPGNITDR-AKIEQV- 119
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESA 262
V+ + G +RIG N GSL D ++ Y G +P MVE+A
Sbjct: 120 --------------------VKAARDKGIPIRIGVNSGSLPKDLLVKYEGATPEAMVEAA 159
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +F + + S+K+++ VM+++YRL+ ++ YPLHLGVTEAG G+ G
Sbjct: 160 LREIEILEDNNFSDIVVSLKSTDVRVMIESYRLIAKQI-----KYPLHLGVTEAGLGDAG 214
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
++SA+GIGTLL++G+GDT+R SLT P +E+ LA L +R +Q P
Sbjct: 215 VVRSALGIGTLLEEGIGDTLRCSLTGDPVREVKVAYDILAALHIRWKGIQYTSCPT--CG 272
Query: 382 RHYFDFQRRSGQLPIQKEGEEVD 404
R D ++ + +QK E VD
Sbjct: 273 RIGIDLEKIVAE--VQKRLENVD 293
>gi|336400419|ref|ZP_08581198.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 21_1A]
gi|336162607|gb|EGN65571.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 21_1A]
Length = 354
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 157/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ RKTR V VGN+ IG +PI +Q+MT ++ DV TV ++ + G LVR+T+ +
Sbjct: 1 MERKTRVVKVGNLKIGGNNPIIIQSMTNTNSADVESTVRQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYSKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AIYHIRLLEKFEFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL D +GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLIDAIGDTLRVSLTENPVEEIKVAKEI 247
>gi|336435157|ref|ZP_08614874.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae bacterium 1_4_56FAA]
gi|336001548|gb|EGN31684.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae bacterium 1_4_56FAA]
Length = 351
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 165/291 (56%), Gaps = 35/291 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R +T+ V +G+V IG HP+ +Q+MT T+DVA TVE+++R+ G ++VR TV
Sbjct: 2 LRTQTKEVKIGSVTIGGAHPVAIQSMTNTKTEDVAATVEQILRLEAAGCEIVRCTVPTME 61
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +A+ E DKIR+NPGN
Sbjct: 62 AAKALKEIK-----KQIHIPLVADIHFDYKMAIAAIENGADKIRINPGNIGS-------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
EE +VEK K+YG +RIG N GSL ++ YG + G+VES
Sbjct: 109 --------------EERVRAVVEKAKEYGVPIRIGVNSGSLEKPLLEKYGGVTAEGIVES 154
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + + + + N + S+K+S+ ++ V+A+ L+ + YPLH+G+TE+G
Sbjct: 155 ALDKVHMIESMGYDNLVVSIKSSDVLMCVKAHELIAKQ-----CPYPLHVGITESGTIYS 209
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
G +KS++G+G +L +G+G+TIRVSLT P +EI + L LG+R ++
Sbjct: 210 GNIKSSVGLGIILHEGIGNTIRVSLTGDPVEEIRSAKLILKTLGLRKGGIE 260
>gi|383823892|ref|ZP_09979080.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
xenopi RIVM700367]
gi|383338328|gb|EID16693.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
xenopi RIVM700367]
Length = 386
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 168/325 (51%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS++PI VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 18 RRKTRQLMVGDVGVGSDYPISVQSMCTTKTHDVNATLQQIAELTAAGCDIVRVACPRQED 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA EI ++ IP++ADIHF P E +RVNPGN + + ++
Sbjct: 78 ADALAEIA-----RHSQIPVIADIHFQPRYIFAAIEAGCAAVRVNPGNIKEFDGRVAEVA 132
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ G +RIG N GSL R + YG +P +VESA
Sbjct: 133 TAAGDA---------------------GIPIRIGVNAGSLDKRFLEKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F N S+K ++PVVMVQAY LL ++ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHGFGNIKISVKHTDPVVMVQAYELLASQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL G+GDTIRVSL+ PP +E+ + L +L +R L+ +
Sbjct: 227 TVKSAVAFGALLSKGIGDTIRVSLSAPPVEEVKVGNQILESLNLRPRSLE--IVSCPSCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 285 RAQVDVYTLANEVSAGLEGLEVPLR 309
>gi|237741512|ref|ZP_04571993.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium sp. 4_1_13]
gi|229429160|gb|EEO39372.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium sp. 4_1_13]
Length = 354
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 157/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVGNLKIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYTKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFEFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIGTLL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTIKSAIGIGTLLVDGIGDTLRVSLTENPVEEIKVAKEI 247
>gi|359441760|ref|ZP_09231646.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20429]
gi|358036262|dbj|GAA67895.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20429]
Length = 372
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
>gi|440695881|ref|ZP_20878394.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
turgidiscabies Car8]
gi|440281953|gb|ELP69473.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
turgidiscabies Car8]
Length = 378
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 172/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 11 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + + IP++ADIHF P E +RVNPGN QF
Sbjct: 71 ADAL-----ATIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 117
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
DD+ ++ + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 118 --DDQVKE-----------IARAAKDHGTPIRIGVNAGSLDRRLLQKYGRATPEALVESA 164
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PV+MV AYR L A DYPLHLGVTEAG G
Sbjct: 165 LWEASLFEEHDFRDIKISVKHNDPVIMVNAYRQLAA-----ACDYPLHLGVTEAGPAFQG 219
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R L+ +
Sbjct: 220 TIKSAVAFGALLSEGIGDTIRVSLSAPPVEEIKVGNQILESLNLRQRGLE--IVSCPSCG 277
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 278 RAQVDVYKLAEEVTAGLEGMEVPLR 302
>gi|399544721|ref|YP_006558029.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinobacter
sp. BSs20148]
gi|399160053|gb|AFP30616.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinobacter
sp. BSs20148]
Length = 372
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 152/272 (55%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI VQ+MT +T DV T+ ++ + D GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPIAVQSMTNTETCDVEATLGQIQALQDAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I+ +PLVADIHF +ALRVAE D IR+NPGN
Sbjct: 69 AEAFGRIR-----ARAGVPLVADIHFDYKIALRVAELGVDCIRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ S ++ C+ +RIG N GSLS + YG+ + +VESA
Sbjct: 115 -------------EDRISAVISACRDRNIPIRIGVNAGSLSKDLQRKYGEPNADALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I + DF NF S+KAS + V+AYR + ++ D PLHLG+TEAG G
Sbjct: 162 MRNVDILDRHDFQNFKVSLKASEVFMTVEAYRKIATQI-----DQPLHLGITEAGGFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDTIRVSL P +EI
Sbjct: 217 TVKSSIGLGLLLMDGIGDTIRVSLAADPVQEI 248
>gi|359437408|ref|ZP_09227473.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20311]
gi|359447499|ref|ZP_09237093.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20439]
gi|392555095|ref|ZP_10302232.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas undina NCIMB 2128]
gi|358027913|dbj|GAA63722.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20311]
gi|358038597|dbj|GAA73342.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20439]
Length = 372
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT D+ TV ++ I D GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDIDATVAQIQAIQDAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----SIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
>gi|153872072|ref|ZP_02001070.1| IspG protein [Beggiatoa sp. PS]
gi|152071461|gb|EDN68929.1| IspG protein [Beggiatoa sp. PS]
Length = 362
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 159/279 (56%), Gaps = 34/279 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
+S K VRR +R + VGNVA+G PI VQ+MT DT DV TV ++ + + GAD+VR+
Sbjct: 2 QSEFKIVRRPSRQIYVGNVAVGGNAPISVQSMTNTDTCDVQSTVTQIKALQNAGADIVRV 61
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+V + A+A +IK ++ ++PL+ADIHF +ALRVAE D +R+NPGN
Sbjct: 62 SVPTQEAAEAFGQIKAAV-----SVPLIADIHFDYRIALRVAELGVDCLRINPGNIGR-- 114
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SP 255
E+ +V+ + G ++RIG N GSL + YG+ +
Sbjct: 115 --------------------EDRVKSVVDSARDKGISIRIGVNAGSLEKELQKKYGEPTA 154
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
+VESA I KL+F +F S+KAS + V AYR L ++ + PLHLG+TE
Sbjct: 155 DALVESALRHIDILDKLNFPDFKVSLKASEIFMTVAAYRKLATQI-----EQPLHLGITE 209
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
AG G +KSAIG+G LL DG+GDTIRVSL P +EI
Sbjct: 210 AGGFRAGAVKSAIGLGMLLADGIGDTIRVSLAADPVEEI 248
>gi|398311451|ref|ZP_10514925.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
mojavensis RO-H-1]
Length = 375
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|375099461|ref|ZP_09745724.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora cyanea NA-134]
gi|374660193|gb|EHR60071.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora cyanea NA-134]
Length = 383
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 171/328 (52%), Gaps = 42/328 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGSVGVGSDHPISVQSMTTTVTADVNATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN---FADRRAQFE 200
A+A I IP++ADIHF P E +RVNPGN F D+ A+
Sbjct: 78 AEALPAIA-----AKSKIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIKKFDDKVAEIA 132
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMV 259
Q K +G +RIG N GSL R++ +G +P +
Sbjct: 133 Q------------------------AAKDHGTPIRIGVNAGSLDPRLLKKHGKATPEALA 168
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG
Sbjct: 169 ESALWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPA 223
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFE 378
G +KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 224 FQGTIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGTQILQSLNLRPRKLEIVSCP-- 281
Query: 379 EKHRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ +G EV R
Sbjct: 282 SCGRAQVDVYKLADEVTAGLDGLEVPLR 309
>gi|88858480|ref|ZP_01133122.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas tunicata D2]
gi|88820097|gb|EAR29910.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas tunicata D2]
Length = 372
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 157/273 (57%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRK+R + VGNV IG PI VQ+MT DT +V TV+++ I GAD+VR++V
Sbjct: 8 VRRKSRRIYVGNVPIGDGAPIAVQSMTNTDTLNVEATVKQIQAIQAAGADIVRVSVPTMD 67
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A +IK + +IPLVADIHF +AL+VAE D +R+NPGN
Sbjct: 68 AAEAFRKIKQQV-----DIPLVADIHFDYRIALKVAEYGVDCLRINPGNIGS-------- 114
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+ ++ +RIG N GSL + YG+ +P ++ES
Sbjct: 115 --------------EDRIKAVVDAARERNIPIRIGVNGGSLERDLQEKYGEPTPEALLES 160
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I ++L+F NF S+KAS+ + V AYRLL E+ D PLHLG+TEAG
Sbjct: 161 AMRHVNILQRLNFDNFKVSVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGFRS 215
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 216 GSVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
>gi|317471588|ref|ZP_07930932.1| GcpE protein [Anaerostipes sp. 3_2_56FAA]
gi|316900903|gb|EFV22873.1| GcpE protein [Anaerostipes sp. 3_2_56FAA]
Length = 358
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 167/313 (53%), Gaps = 37/313 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R T+ + +G+ IG +P+ +Q+MT T+DV TV +++ + G D+VR TV
Sbjct: 4 RNNTKVIRIGDKKIGGGNPVLIQSMTNTKTEDVESTVSQILSLEKAGCDIVRCTVPTPEA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA EIK K +IPLVADIHF +A+ E DKIR+NPGN
Sbjct: 64 ADALGEIK-----KRIHIPLVADIHFNYKLAIAAMENGADKIRINPGNIGG--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVESA 262
E+ ++EK K+YG +R+G N GSL ++ Y+G + G+VESA
Sbjct: 110 -------------EDRIRAVIEKAKEYGVPIRVGVNSGSLEKELVEKYHGVTAEGLVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ R+ D+ N S+K+S+ ++ +AY L+ ++ DYPLH+G+TEAG G
Sbjct: 157 VDKVRMIEAFDYDNLAVSIKSSDVLMCARAYELVAEQI-----DYPLHVGITEAGTVYSG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+G+G +L GLGDTIRVSLT P EI + L LG+R ++ V
Sbjct: 212 NIKSAVGLGIILHQGLGDTIRVSLTGDPVNEIASAKLILKTLGLRRGGIE--VVSCPTCG 269
Query: 382 RHYFDFQRRSGQL 394
R D +GQ+
Sbjct: 270 RTNIDLISLAGQV 282
>gi|429762658|ref|ZP_19295044.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anaerostipes
hadrus DSM 3319]
gi|429181292|gb|EKY22464.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anaerostipes
hadrus DSM 3319]
Length = 353
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 165/290 (56%), Gaps = 35/290 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TR + +G+V IG +P+ +Q+MT T++V TV++++ + G ++R TV +
Sbjct: 4 RNQTRVISIGDVKIGGGNPVAIQSMTNTKTENVEETVKQILALEKAGCQIIRCTVPTMKA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK K +IPLVADIHF +A+ E DKIR+NPGN
Sbjct: 64 AEAFTEIK-----KQIHIPLVADIHFDYKLAIAAMEHGADKIRINPGNIGG--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY-GDSPRGMVESA 262
EE +VE KKY +R+G N GSL ++ Y G + +G+VESA
Sbjct: 110 -------------EENIRKVVETAKKYHVPIRVGVNSGSLEKPLVKKYNGVTAQGLVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ + K DFH+ + S+K+S+ ++ QAYRL+ ++ DYPLH+G+TEAG G
Sbjct: 157 LDKVAMLEKYDFHDMVVSIKSSDVLMCAQAYRLVADKI-----DYPLHVGITEAGTVFSG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA+G+G +L G+GDTIRVSLT P EI + L LG+R+ ++
Sbjct: 212 NIKSAVGLGIILNQGIGDTIRVSLTGDPVNEIASAKLILKTLGLRSGGIE 261
>gi|421730975|ref|ZP_16170101.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|407075129|gb|EKE48116.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
amyloliquefaciens subsp. plantarum M27]
Length = 375
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV T+ E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATIAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|404482331|ref|ZP_11017558.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridiales
bacterium OBRC5-5]
gi|404344492|gb|EJZ70849.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridiales
bacterium OBRC5-5]
Length = 352
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 178/326 (54%), Gaps = 37/326 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+KTR V +G+ IG + PI +Q+M T+DV TV++++R+ D G D++R+ V
Sbjct: 1 MRKKTRLVQIGDKYIGDDMPILIQSMCNTKTEDVKATVDQILRLEDAGCDIIRVAVPNSE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +AL + DKIR+NPGN
Sbjct: 61 AALAISEIK-----KQIHIPLVADIHFDYRLALEAIKSGCDKIRINPGNIGS-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E +V+ CK+ +R+G N GSL ++ YG + G+VES
Sbjct: 108 --------------SERIKAVVDACKERNLPIRVGVNSGSLEKNLIEKYGGVTAEGIVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + +I +D++N + S+K+S+ ++ V+A+ E+ DYPLH+G+TE+G +
Sbjct: 154 ALDKVKIIEDMDYNNLVISIKSSDVMMCVKAH-----ELISQRTDYPLHIGITESGTVKR 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KS++G+G +L G+GDT+RVSLT P +EI + L NLG+R ++ V
Sbjct: 209 GMIKSSLGLGIILYQGIGDTVRVSLTGDPVEEIFAAKLILNNLGLRKGGIE--VVSCPTC 266
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D +G++ EG +++ +
Sbjct: 267 GRTNIDLIGLAGKVEKLVEGYDLNIK 292
>gi|16079562|ref|NP_390386.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. 168]
gi|430759026|ref|YP_007208950.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. BSP1]
gi|1730252|sp|P54482.1|ISPG_BACSU RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|1303846|dbj|BAA12502.1| YqfY [Bacillus subtilis]
gi|2634940|emb|CAB14437.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Bacillus subtilis subsp. subtilis str. 168]
gi|430023546|gb|AGA24152.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. BSP1]
Length = 377
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 7 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 66
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 67 RAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 115
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K G +RIG N GSL RI+ YG + GMVE
Sbjct: 116 ----------------EKVEAVVKAAKDKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 159
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 160 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 214
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 215 AGTVKSAAGLGAILSKGIGNTMRISLSADPVEEVKVAREL 254
>gi|254480163|ref|ZP_05093411.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [marine gamma
proteobacterium HTCC2148]
gi|214039725|gb|EEB80384.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [marine gamma
proteobacterium HTCC2148]
Length = 376
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG+VA+G + PI VQ+MT +T DVA TV +V IAD GAD+VR++V
Sbjct: 9 RRESRKIYVGDVAVGGDAPISVQSMTNTETCDVAATVSQVQAIADAGADIVRVSVPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A +I+ + ++PLVADIHF +AL+VAE D +R+NPGN
Sbjct: 69 AEAFKQIRAQV-----SVPLVADIHFDHKIALKVAEYGVDCLRINPGNIG---------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ ++ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 114 -RDDKVRE-----------VINSARDKGIPIRIGVNAGSLGKELQRKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I K ++ +F S+KAS + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MHHVDILDKHNYPDFKVSVKASEVFMAVAAYRLLAKEI-----DQPLHLGITEAGGLRGG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++G+G LL DG+GDTIR+SL P +E+
Sbjct: 217 TVKSSVGLGMLLMDGIGDTIRISLAADPVEEV 248
>gi|365134461|ref|ZP_09343287.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Subdoligranulum sp. 4_3_54A2FAA]
gi|363614037|gb|EHL65540.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Subdoligranulum sp. 4_3_54A2FAA]
Length = 350
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 155/273 (56%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V +G V +G +P+ VQ+M D+AG V + R+ +G +VR+TV
Sbjct: 1 MRKNTRAVRIGGVTVGGGNPVAVQSMLNVPIHDIAGNVAQAKRLEAEGCQIVRVTVPSVA 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+ +KN++ +P+VADIHF VAL AE DKIR+NPGN D
Sbjct: 61 DVPVVEALKNAV-----KMPVVADIHFDYKVALACAEAGVDKIRINPGNIGDD------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
H+ EV S C+ G +RIG N GSL I++ YG +P +VES
Sbjct: 109 -----------AHVGEVAS----ACRARGIPIRIGVNGGSLEKEILAKYGKVTPEALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + + DF++ + S+K+SN V+V+AYR L DYPLH+GVTEAG
Sbjct: 154 AMYHVSLLERHDFNDIVISIKSSNVPVVVEAYRQLSLR-----CDYPLHVGVTEAGTYRM 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+GIGTLL +G+GDTIRVSLT+ PEKE+
Sbjct: 209 GLIKSAMGIGTLLLEGIGDTIRVSLTDEPEKEV 241
>gi|359778894|ref|ZP_09282150.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
globiformis NBRC 12137]
gi|359303761|dbj|GAB15979.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
globiformis NBRC 12137]
Length = 388
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 170/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDFPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G ++RIG N GSL I+ YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IAKAAKDHGTSIRIGVNAGSLEPGILKKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PVVMV AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVVMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 286 RAQVDVYTLAEQVTAGLEGMEIPLR 310
>gi|429196302|ref|ZP_19188274.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
ipomoeae 91-03]
gi|428668000|gb|EKX67051.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
ipomoeae 91-03]
Length = 385
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +++ K IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----AIIAKKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IARAAKDHGTPIRIGVNAGSLDRRLLRKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F + S+K ++PVVMV AYR L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHGFRDIKISVKHNDPVVMVNAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL +G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSEGIGDTIRVSLSAPPVEEV 258
>gi|119476377|ref|ZP_01616728.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [marine gamma
proteobacterium HTCC2143]
gi|119450241|gb|EAW31476.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [marine gamma
proteobacterium HTCC2143]
Length = 371
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+VA+G + PI VQ+MT DT DVA TV ++ + D AD+VR++V
Sbjct: 9 RRKTRQIMVGDVAVGGDAPISVQSMTNTDTCDVAATVAQIRALEDACADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ + ++PLVADIHF +AL+VAE D +R+NPGN
Sbjct: 69 AEAFKAIRAQV-----SVPLVADIHFDYKIALKVAEYGVDCLRINPGNIG---------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ + +++ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 114 -RDDKVRA-----------VIDSARDKGIPLRIGVNAGSLEKELQRKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I LDF NF S+KAS+ + V AYR + ++ D PLHLG+TEAG G
Sbjct: 162 MRHIDILDSLDFQNFKLSVKASDVFMAVAAYRQISTQI-----DQPLHLGITEAGGLRGG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++G+G LL DG+GDTIR+SL P +E+
Sbjct: 217 TVKSSVGLGMLLMDGIGDTIRISLAADPVEEV 248
>gi|288555778|ref|YP_003427713.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
pseudofirmus OF4]
gi|288546938|gb|ADC50821.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
pseudofirmus OF4]
Length = 367
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + VQ+MTT T DV TV E+ R+ + G +VR+
Sbjct: 5 THRTKTRPVKVGNLTIGGNNEVVVQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVACPDM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK + +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAAEAIADIKAQI-----SIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTIKSAAGLGAILNMGIGNTVRISLSADPVEEVKVAREL 252
>gi|453383401|dbj|GAC82302.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
paraffinivorans NBRC 108238]
Length = 395
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 173/326 (53%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HPI VQ+MTT T D+ T++++ ++ G D+VR+ +
Sbjct: 27 RRKTRQLFVGPVGVGSDHPISVQSMTTTKTHDINATLQQIAQLTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI++ YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRILAKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLE--IVSCPSC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGLEVPLR 318
>gi|221310431|ref|ZP_03592278.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221314754|ref|ZP_03596559.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221319677|ref|ZP_03600971.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221323954|ref|ZP_03605248.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. SMY]
gi|321311990|ref|YP_004204277.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis BSn5]
gi|384176129|ref|YP_005557514.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|428279995|ref|YP_005561730.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. natto BEST195]
gi|452914901|ref|ZP_21963527.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis MB73/2]
gi|291484952|dbj|BAI86027.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. natto BEST195]
gi|320018264|gb|ADV93250.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis BSn5]
gi|349595353|gb|AEP91540.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|407959753|dbj|BAM52993.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Synechocystis
sp. PCC 6803]
gi|407965328|dbj|BAM58567.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Bacillus
subtilis BEST7003]
gi|452115249|gb|EME05645.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
subtilis MB73/2]
Length = 375
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KRISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKDKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTMRISLSADPVEEVKVAREL 252
>gi|384564972|ref|ZP_10012076.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora glauca K62]
gi|384520826|gb|EIE98021.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Saccharomonospora glauca K62]
Length = 383
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 174/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS++PI VQ+MTT T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGSVGVGSDYPISVQSMTTTVTADVNATLQQIAELTAAGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I IP++ADIHF P E +RVNPGN ++
Sbjct: 78 AEALPAIA-----AKSKIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P + ESA
Sbjct: 123 KFDDKVKE-----------IAQAAKDHGTPIRIGVNAGSLDPRLLKKYGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGTQILQSLNLRPRKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ +G EV R
Sbjct: 285 RAQVDVYKLADEVTAGLDGLEVPLR 309
>gi|420474126|ref|ZP_14972802.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-19]
gi|393089262|gb|EJB89902.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-19]
Length = 359
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGSTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|311069108|ref|YP_003974031.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
atrophaeus 1942]
gi|419820245|ref|ZP_14343857.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
atrophaeus C89]
gi|310869625|gb|ADP33100.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
atrophaeus 1942]
gi|388475657|gb|EIM12368.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
atrophaeus C89]
Length = 370
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K +IPLV DIHF +AL+ E DKIR+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KQISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIG-RREKVEA 118
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 119 ---------------------VVKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASRAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSLGIGNTVRISLSADPVEEVKVAREL 252
>gi|15645249|ref|NP_207419.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 26695]
gi|410023860|ref|YP_006893113.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Rif1]
gi|410501627|ref|YP_006936154.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Rif2]
gi|410682147|ref|YP_006934549.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 26695]
gi|419417395|ref|ZP_13957843.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori P79]
gi|8928129|sp|O25342.1|ISPG_HELPY RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|2313753|gb|AAD07695.1| protein E (gcpE) [Helicobacter pylori 26695]
gi|384373159|gb|EIE28685.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori P79]
gi|409893788|gb|AFV41846.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 26695]
gi|409895517|gb|AFV43439.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Rif1]
gi|409897178|gb|AFV45032.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Rif2]
Length = 359
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
E +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------EKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|372268289|ref|ZP_09504337.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alteromonas
sp. S89]
Length = 373
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 155/273 (56%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRR +R +MVGNV +G PI VQ+MT +T DVA TV+++ R+ + GAD+VR++V
Sbjct: 8 VRRVSRQIMVGNVPVGGGAPISVQSMTNTETCDVAATVDQIQRLENAGADIVRVSVPSME 67
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K +PLVADIHF +ALRVA+ D +R+NPGN
Sbjct: 68 AAEAFGEIK-----KQVAVPLVADIHFDYRIALRVADLGVDCLRINPGNIGR-------- 114
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+K + +RIG N GSL + YG+ +P +VES
Sbjct: 115 --------------EKRIRAVVDKARDLNIPIRIGVNAGSLEKDLQKKYGEPTPDALVES 160
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I L+F +F S+KAS+ + AYR L ++ + PLHLG+TEAG
Sbjct: 161 ALRHVDILDSLNFQDFKVSVKASDIFMATAAYRKLATQI-----EQPLHLGITEAGGLRA 215
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSAIG+G LL DG+GDT+RVSL P +E+
Sbjct: 216 GTVKSAIGLGALLLDGIGDTLRVSLAADPVEEV 248
>gi|418466653|ref|ZP_13037566.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
coelicoflavus ZG0656]
gi|371552742|gb|EHN79977.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
coelicoflavus ZG0656]
Length = 385
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGPVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA ++ K IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----PVIAKKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P + ESA
Sbjct: 125 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGRATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +EI
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEI 258
>gi|254428190|ref|ZP_05041897.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alcanivorax
sp. DG881]
gi|196194359|gb|EDX89318.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alcanivorax
sp. DG881]
Length = 372
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 157/275 (57%), Gaps = 34/275 (12%)
Query: 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG 141
K RRKTR VMVGNV +G + PI VQ+MT +T DV TV ++ R+ D G D+VR++V
Sbjct: 6 KIQRRKTRQVMVGNVPVGGDAPISVQSMTNTETCDVDATVGQIRRLQDAGVDIVRVSVPS 65
Query: 142 KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFE 200
A+A +I+ K ++PLVADIH+ +AL VAE D +R+NPGN
Sbjct: 66 MDAAEAFGKIR-----KQVDVPLVADIHYDYKIALAVAEQGVDCLRINPGNIGR------ 114
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMV 259
E+ +++ K G +RIG N GSL + YG+ + +V
Sbjct: 115 ----------------EDRIKAVIQCAKDKGLPIRIGVNAGSLEKELQRKYGEPTSDALV 158
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA A I + DF +F S+KASN + +QAYR L +++ + PLHLGVTEAG
Sbjct: 159 ESALRHADILDRYDFQDFKVSVKASNVFMTLQAYRKLSSQL-----EQPLHLGVTEAGTF 213
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ +G+LL +G+GDTIRVSL P +E+
Sbjct: 214 RSGTVKSAVALGSLLMEGIGDTIRVSLAADPVEEV 248
>gi|229820984|ref|YP_002882510.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Beutenbergia
cavernae DSM 12333]
gi|229566897|gb|ACQ80748.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Beutenbergia cavernae DSM 12333]
Length = 392
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 159/293 (54%), Gaps = 47/293 (16%)
Query: 65 EGSPLLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEV 124
E P+L PR RKTR + VG+V +G + P+ VQ+MTT T D+ T++++
Sbjct: 19 EAPPVLAPR------------RKTRKIRVGSVEVGGDAPVSVQSMTTTKTTDINATLQQI 66
Query: 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECF 182
+ G D+VR+ + +ADA ++ K IP++ADIHF P A C
Sbjct: 67 AELTATGCDIVRVACPTQDDADAL-----PIIAKKSQIPVIADIHFQPKYVFAAIDAGCA 121
Query: 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242
+RVNPGN + DD+ ++ + + K G ++RIG N GS
Sbjct: 122 -AVRVNPGN----------IRKFDDKVKE-----------IADAAKAAGTSLRIGVNAGS 159
Query: 243 LSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMY 301
L R+++ YG +P +VESA A + + DFH+F S+K ++PVVMV+AY LL
Sbjct: 160 LDPRLLAKYGKATPEALVESAVWEASLFEEHDFHDFKISVKHNDPVVMVRAYELLAER-- 217
Query: 302 VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
D+PLHLGVTEAG G +KSA G LL G+GDTIRVSL+ PP +E+
Sbjct: 218 ---GDWPLHLGVTEAGPAFQGTIKSATAFGALLSQGIGDTIRVSLSAPPVEEV 267
>gi|420465320|ref|ZP_14964087.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-6]
gi|393082807|gb|EJB83523.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-6]
Length = 359
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|409394992|ref|ZP_11246118.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. Chol1]
gi|409395957|ref|ZP_11246982.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. Chol1]
gi|409119456|gb|EKM95839.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. Chol1]
gi|409120361|gb|EKM96710.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. Chol1]
Length = 370
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNVA+G + PI VQ+MT +T DV TV ++ R+AD GAD+VR++V
Sbjct: 9 RRPSRKIWVGNVAVGGDAPISVQSMTNTETCDVDATVGQIRRLADAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVQLPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +VE + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVEAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYR L ++ + PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLNFPDFKVSVKASDVFMAVEAYRQLAKQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
>gi|418294914|ref|ZP_12906791.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
gi|379066274|gb|EHY79017.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
Length = 370
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 159/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG+V +G + PI VQ+MT +T DV TV ++ R+A+ GAD+VR++V
Sbjct: 9 RRQSRKIWVGSVPVGGDAPISVQSMTNTETCDVEATVAQIQRLANAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I+ LVQ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIRQ-LVQ----LPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVDHLDRLDFQDFKVSVKASDVFMAVEAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
>gi|333901475|ref|YP_004475348.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fulva 12-X]
gi|333116740|gb|AEF23254.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fulva 12-X]
Length = 370
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG+V +G + PI VQ+MT DT DVA TVE++ R+ GAD+VR++V
Sbjct: 9 RRLSRKIWVGSVPVGGDAPIAVQSMTNTDTNDVAATVEQIRRLEAAGADIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVNLPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +VE + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVKAVVEAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLNFPDFKVSVKASDVFMAVEAYRLLAKQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++G+G LL +G+GDTIR+SL P +EI
Sbjct: 217 TVKSSVGLGMLLAEGIGDTIRISLAADPVEEI 248
>gi|404330380|ref|ZP_10970828.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Sporolactobacillus vineae DSM 21990 = SL153]
Length = 369
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 151/280 (53%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + +Q+MTT T DV TV ++ R+ D G LVR+
Sbjct: 5 TPRTKTRKVRVGNLTIGGANEVIIQSMTTTKTHDVEATVAQIHRLEDAGCQLVRVACPTM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
+A A +IK + +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 EDALAIPDIK-----RQIHIPLVVDIHFNYKLALKAIEGGADKIRINPGNIGKR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V K +RIG N GSL I+ YG + GMVE
Sbjct: 114 ----------------ENVEAVVRAAKAKHIPIRIGVNAGSLEKHILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + S+KASN + V+AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIVVSLKASNINLAVEAY-----EKAARAFDYPLHLGITESGTKF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G LL +G+G+TIRVSL+ P +E+ CR L
Sbjct: 213 SGSIKSAAGLGILLHEGIGNTIRVSLSADPVEEVRVCREL 252
>gi|421145791|ref|ZP_15605628.1| GcpE protein [Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
gi|395487805|gb|EJG08723.1| GcpE protein [Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
Length = 354
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 156/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVGNLKIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYTKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFKFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIGTLL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTIKSAIGIGTLLVDGIGDTLRVSLTENPVEEIKVAKEI 247
>gi|420443615|ref|ZP_14942543.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-41]
gi|420477630|ref|ZP_14976285.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-23]
gi|393061122|gb|EJB61991.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-41]
gi|393092309|gb|EJB92930.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-23]
Length = 359
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|149182017|ref|ZP_01860503.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
SG-1]
gi|148850282|gb|EDL64446.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
SG-1]
Length = 370
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 158/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VGN+ IG + +Q+MTT T DV TV+E+ R+ + G +VR+
Sbjct: 3 EIIH---RSKTRPVKVGNLTIGGNDELIIQSMTTTKTHDVEATVKEIHRLEEAGCQVVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A +IK K NIPLV DIHF +AL+ E DKIR+NPGN RR
Sbjct: 60 ACPDERAANAIADIK-----KQINIPLVVDIHFDYKLALKAIEGGADKIRINPGNIG-RR 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
+ E +V+ K+ G +RIG N GSL +I+ YG +
Sbjct: 114 EKVE---------------------AVVKAAKEKGIPIRIGVNAGSLERKILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA +I LDFH+ + SMKAS+ + ++AY +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAYT-----KAAQTFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G LL G+G+T+R+SL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGVLLSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|399908776|ref|ZP_10777328.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Halomonas sp.
KM-1]
Length = 371
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/273 (41%), Positives = 152/273 (55%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRK+R + VG V +G + PI VQ+MT DT DVA TV ++ R+ D GAD+VR++V
Sbjct: 8 VRRKSRQIHVGKVPVGGDAPISVQSMTNTDTLDVAATVAQIQRLEDAGADIVRVSVPCMD 67
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A IK + N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 68 SAEAFGRIK-----QQVNVPLVADIHFDYKIALRVAELGVDCLRINPGNIGK-------- 114
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V + G +RIG N GSL + YG+ +P +VES
Sbjct: 115 --------------EDRVRAVVSAARDNGIPIRIGVNAGSLEKELQRKYGEPTPEALVES 160
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A +LDF + S+KAS+ + V AYR L + + PLHLG+TEAG
Sbjct: 161 AMRHIDHLDRLDFQEYKVSVKASDVFMAVAAYRQLAKLI-----EQPLHLGITEAGGLRS 215
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KS+IG+G LL DG+GDTIRVSL P +EI
Sbjct: 216 GTVKSSIGLGMLLMDGIGDTIRVSLAADPVEEI 248
>gi|357392190|ref|YP_004907031.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Kitasatospora setae KM-6054]
gi|311898667|dbj|BAJ31075.1| putative 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Kitasatospora setae KM-6054]
Length = 386
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R +MVGNV +G + P+ VQ+MTT T D+ T++++ ++ G +VR+ V + +
Sbjct: 19 RRHSRQIMVGNVPVGGDAPVSVQSMTTTLTSDINATLQQIAQLTASGCQIVRVAVPSQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ K IP++ADIHF P A C +RVNPGN +
Sbjct: 79 ADAL-----PIIAKKSQIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGN----------I 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+ DD+ + + + K G +RIG N GSL R++ YG +P +VES
Sbjct: 123 KAFDDKVGE-----------IAKAAKAAGVPIRIGVNAGSLDKRLLEKYGRATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + + DF + S+K ++PVVM+ AYR L A DYPLHLGVTEAG
Sbjct: 172 ALWECSLFEEHDFRDIKISVKHNDPVVMINAYRQLAA-----ACDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R L+ P
Sbjct: 227 GTIKSAVAFGALLAEGIGDTIRVSLSAPPAEEIKVGIQILESLNLRQRGLEIVSCP--SC 284
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 GRAQVDVYKLAEEVTAGLEGMEVPLR 310
>gi|256844847|ref|ZP_05550305.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 3_1_36A2]
gi|256718406|gb|EEU31961.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 3_1_36A2]
Length = 354
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 156/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVGNLKIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYTKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFKFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIGTLL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTIKSAIGIGTLLVDGIGDTLRVSLTENPVEEIKVAKEI 247
>gi|420450281|ref|ZP_14949144.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-45]
gi|393067642|gb|EJB68450.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-45]
Length = 359
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ V +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQVFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|172040513|ref|YP_001800227.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Corynebacterium urealyticum DSM 7109]
gi|448823491|ref|YP_007416656.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Corynebacterium
urealyticum DSM 7111]
gi|254806873|sp|B1VGA4.1|ISPG_CORU7 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|171851817|emb|CAQ04793.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Corynebacterium
urealyticum DSM 7109]
gi|448276988|gb|AGE36412.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Corynebacterium
urealyticum DSM 7111]
Length = 386
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GSEHPI VQ+MTT T D+ T++++ ++ G D+VR+ R+
Sbjct: 19 RRKTRQLMVGDVGVGSEHPISVQSMTTTKTHDINATLQQIAQLTASGCDIVRVACPKPRD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K IP++ADIHF P + E +RVNPGN
Sbjct: 79 AEAL-----PIIAKKSPIPVIADIHFQPRYIFQAIEAGCAAVRVNPGNI----------- 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ ++ + + G +RIG N GSL R++ YG +P +VESA
Sbjct: 123 ---KEFDGRVKEV-------AKAAGDAGIPIRIGVNGGSLDKRLLEKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F + S+K S+PVVMV+AYR L A+ DYPLHLGVTEAG G
Sbjct: 173 IWEAGLFEEHGFGDIAISVKHSDPVVMVEAYRQLAAKT-----DYPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++ G LL G+GDTIRVSL+ P +EI
Sbjct: 228 TIKSSVAFGALLSQGIGDTIRVSLSADPVEEI 259
>gi|255021265|ref|ZP_05293314.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus caldus ATCC 51756]
gi|340782111|ref|YP_004748718.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus caldus SM-1]
gi|254969276|gb|EET26789.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus caldus ATCC 51756]
gi|340556264|gb|AEK58018.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidithiobacillus caldus SM-1]
Length = 366
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG VAIG PI VQ+MT +T+DVA TV ++ R+ GAD+VR++V
Sbjct: 9 RRHSRQIHVGKVAIGGGAPISVQSMTNTETRDVAATVAQIRRLEAVGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA-ECFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ + +PLVADIHF +AL+V + D +R+NPGN ++
Sbjct: 69 AEAFRAIRAQV-----EVPLVADIHFDHRIALQVMRDGVDGLRINPGNIG-------SVD 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
T +VE K G +RIG N GSL I YG+ +P +VESA
Sbjct: 117 KT---------------RLVVEMAKDRGIPIRIGVNAGSLEKDIQEKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDFH+ S+KAS+ + V AYRLL ++ DYPLHLG+TEAG G
Sbjct: 162 LRHVAILDELDFHDVKISVKASDVFLAVGAYRLLAQKV-----DYPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAIGLGLLLNEGIGDTIRVSLAADPVEEI 248
>gi|302554515|ref|ZP_07306857.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
viridochromogenes DSM 40736]
gi|302472133|gb|EFL35226.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
viridochromogenes DSM 40736]
Length = 385
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGPVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA S + + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----STIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + + +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IAKAARDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AY+ L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYKQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPAEEV 258
>gi|256396861|ref|YP_003118425.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Catenulispora
acidiphila DSM 44928]
gi|256363087|gb|ACU76584.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Catenulispora acidiphila DSM 44928]
Length = 389
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 173/328 (52%), Gaps = 38/328 (11%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
VRRK+R +MVGNV +G + P+ VQ+MTT T DV T++++ ++ G +VR+ V +
Sbjct: 17 AVRRKSRQIMVGNVPVGGDAPVSVQSMTTTLTADVNATLQQIAQLTAAGCQIVRVAVPSQ 76
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFE 200
+ADA +I + IP++ADIHF P A C +RVNPGN
Sbjct: 77 DDADALPQIA-----RKSQIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGN--------- 121
Query: 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMV 259
++ DD+ + + + K G +RIG N GSL R+ YG + +V
Sbjct: 122 -IKAFDDKVGE-----------IAKAAKAAGVPIRIGVNAGSLDKRLYEKYGKATAEALV 169
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA + + DF + S+K ++PVVM+ AYRLL DYPLHLGVTEAG
Sbjct: 170 ESALWECSLFEEHDFRDIKISVKHNDPVVMINAYRLLA-----EACDYPLHLGVTEAGPA 224
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFE 378
G +KSA+ G LL +G+GDTIRVSL+ PP +E+ + L +LG+R L+ P
Sbjct: 225 FQGTIKSAVAFGALLSEGIGDTIRVSLSAPPVEEVKVGAQILESLGLRKRGLEIVSCP-- 282
Query: 379 EKHRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + Q+ +G +V R
Sbjct: 283 SCGRAQVDVYKLADQVSAALDGLKVPLR 310
>gi|226946067|ref|YP_002801140.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Azotobacter
vinelandii DJ]
gi|259493931|sp|C1DE57.1|ISPG_AZOVD RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|226720994|gb|ACO80165.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Azotobacter
vinelandii DJ]
Length = 370
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG VA+G + PI VQ+MT DT DV TV ++ R+ GAD+VR++V
Sbjct: 9 RRPSRKIWVGPVAVGGDAPISVQSMTNTDTHDVEATVAQIRRLEAAGADIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVQLPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF NF S+KAS+ + V AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLDFQNFKVSVKASDVFMAVAAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
>gi|116669965|ref|YP_830898.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
sp. FB24]
gi|166216864|sp|A0JUS8.1|ISPG_ARTS2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|116610074|gb|ABK02798.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
sp. FB24]
Length = 388
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDSPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G ++RIG N GSL I+ YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IARAAKDHGTSIRIGVNAGSLEPGILKKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 286 RAQVDVYTLAEQVTAGLEGMEIPLR 310
>gi|398304428|ref|ZP_10508014.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, partial
[Bacillus vallismortis DV1-F-3]
Length = 354
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 156/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+MTT T DV TV E+ R+A+ G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMTTTKTHDVEATVAEINRLAEAGCQVVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K IPLV DIHF +AL+ E DKIR+NPGN RR + E
Sbjct: 65 RAANAIADIK-----KRITIPLVVDIHFDYKLALKAIEGGADKIRINPGNIG-RREKVEA 118
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+ V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 119 V---------------------VKAAKEKGIPIRIGVNAGSLEKRILEKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|336417732|ref|ZP_08598017.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 11_3_2]
gi|336164679|gb|EGN67581.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 11_3_2]
Length = 358
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 156/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ RKTR V VGN+ IG +PI +Q+MT ++ DV TV ++ + G L R+T+ +
Sbjct: 1 MERKTRVVKVGNLKIGGNNPIVIQSMTNTNSADVESTVRQINELEKAGCQLARMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYSKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFEFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL D +GDT+RVSLTE P +EI + +
Sbjct: 209 GTIKSAIGIGALLIDAIGDTLRVSLTENPVEEIKVAKEI 247
>gi|120554055|ref|YP_958406.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinobacter
aquaeolei VT8]
gi|387814566|ref|YP_005430052.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|166217113|sp|A1TZQ0.1|ISPG_MARAV RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|120323904|gb|ABM18219.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinobacter
aquaeolei VT8]
gi|381339582|emb|CCG95629.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 372
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI VQ+MT +T DV TV ++ I + GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPIAVQSMTNTNTCDVDATVTQIKAIQEAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +I+ + ++PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIR-----QQVSLPLVADIHFDYKIALRVAELGVDCLRINPGNIG---------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD S ++ + +RIG N GSL + YG+ +P +VESA
Sbjct: 114 -RDDR-----------VSAVISAARDRNIPIRIGVNAGSLEKALQRKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I K DF +F S+KAS + V AYRL+ +++ + PLHLG+TEAG G
Sbjct: 162 MRHIDILDKHDFQDFKVSLKASEVFMTVAAYRLIASQI-----EQPLHLGITEAGGFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDTIRVSL P +EI
Sbjct: 217 TVKSSIGLGMLLMDGIGDTIRVSLAADPVQEI 248
>gi|304311808|ref|YP_003811406.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [gamma
proteobacterium HdN1]
gi|301797541|emb|CBL45761.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [gamma
proteobacterium HdN1]
Length = 374
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 164/306 (53%), Gaps = 37/306 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVGNV +G + PI VQ+MT T D+ TV +++R+ GAD+VR++V
Sbjct: 9 RRKSRQIMVGNVPVGGDAPISVQSMTNTKTTDIDATVAQIVRMEAAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA EI+ K N+PLVADIHF +AL VAE D +R+NPGN
Sbjct: 69 ADAFGEIR-----KQVNVPLVADIHFDHKIALAVAEKGVDCLRINPGNIGK--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLS-DRIMSYYGDSPRGMVESA 262
E+ +VE ++ +RIG N GSL D + Y+ + MVESA
Sbjct: 115 -------------EDRIRAVVESAREKKIPIRIGVNAGSLERDLLRKYHEPTADAMVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDF +F S+KASN + V AYR + + + PLHLGVTEAG G
Sbjct: 162 MRHVGILEQLDFPDFKLSLKASNVFMTVDAYRKIAGLI-----EQPLHLGVTEAGTFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSAI +G LL +G+GDT+R+SL P +EI L +LG+R+ + P
Sbjct: 217 TVKSAIALGALLMEGIGDTLRISLAADPVEEIKVGFDILKSLGLRSKGINFIACP--SCS 274
Query: 382 RHYFDF 387
R FD
Sbjct: 275 RQNFDV 280
>gi|291280176|ref|YP_003497011.1| 4-hydroy-3-methylbut-2-en-1-yl diphosphate synthase [Deferribacter
desulfuricans SSM1]
gi|290754878|dbj|BAI81255.1| 4-hydroy-3-methylbut-2-en-1-yl diphosphate synthase [Deferribacter
desulfuricans SSM1]
Length = 350
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 158/272 (58%), Gaps = 33/272 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+KT+ + +GN+ IG ++PI VQ+MT DT+D+ T+ ++ + + G ++VR+ V +
Sbjct: 1 MRKKTKIIELGNLKIGGDNPITVQSMTNTDTRDIEATINQIKSLENAGCEIVRVAVVDEE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVA-LRVAECFDKIRVNPGNFADRRAQFEQL 202
A + IK+ + NIPL+ADIHF +A L + D IR+NPGN
Sbjct: 61 AAKSIRFIKDKI-----NIPLIADIHFDYRLAILSMENGADGIRINPGNIGKA------- 108
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262
EY K++ ++ K + A+RIG N GSL + S YG S + MVESA
Sbjct: 109 -----EYVKKI----------IDAAKMHNVAIRIGVNSGSLEKELKSKYGVSAKAMVESA 153
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
++ + F + FS+KASN ++ ++AYR + DYPLHLGVTEAG G
Sbjct: 154 LKYQQFFEDNGFEDMKFSLKASNVMMTIEAYR-----EFSKRSDYPLHLGVTEAGTFFSG 208
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+GIGTLL +G+GDT+RVSLT P +E+
Sbjct: 209 TIKSAVGIGTLLAEGIGDTLRVSLTADPVEEV 240
>gi|419954094|ref|ZP_14470235.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri TS44]
gi|387969183|gb|EIK53467.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
stutzeri TS44]
Length = 370
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNVA+G + PI VQ+MT +T DV TV ++ R+AD GAD+VR++V
Sbjct: 9 RRPSRKIWVGNVAVGGDAPISVQSMTNTETCDVEATVGQIRRLADAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVQLPLVADIHFDYQIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +VE + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVEAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPEALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYR L ++ + PLHLG+TEAG G
Sbjct: 162 LRHVEHLDRLNFPDFKVSVKASDVFMAVEAYRQLARQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEI 248
>gi|377567892|ref|ZP_09797094.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
terrae NBRC 100016]
gi|377534915|dbj|GAB42259.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
terrae NBRC 100016]
Length = 395
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 171/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 27 RRKTRQLFVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFSAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRILQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A DYPLHLGVTEAG
Sbjct: 180 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAA-----ASDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLE--IVSCPSC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGMEVPLR 318
>gi|365157882|ref|ZP_09354127.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
smithii 7_3_47FAA]
gi|363622552|gb|EHL73711.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
smithii 7_3_47FAA]
Length = 367
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 37/285 (12%)
Query: 78 ESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI 137
E IH R KTR V VGN+ IG + + +Q+MTT T DV TV ++ ++ + G +VR+
Sbjct: 3 EIIH---RSKTRPVKVGNLTIGGSNELIIQSMTTTKTHDVEATVRQIHQLEEAGCQIVRV 59
Query: 138 TVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRR 196
+R A+A EIK K +IPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 60 ACPDERAANAIPEIK-----KRIHIPLVADIHFDYRLALKAIEGGADKIRINPGNIGKR- 113
Query: 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSP 255
E +V+ K+ G +RIG N GSL +I+ YG +
Sbjct: 114 ---------------------EKVEAVVKAAKERGIPIRIGVNAGSLEKKILEKYGYPTA 152
Query: 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315
GMVESA RI LDFH+ + S+KAS+ + ++AY E +DYPLHLG+TE
Sbjct: 153 DGMVESALHHIRILEDLDFHDIIVSLKASDVNLAIEAY-----EKAARTFDYPLHLGITE 207
Query: 316 AGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+G G +KSA G+G +L G+G+T+RVSL+ P +E+ R L
Sbjct: 208 SGTLFAGTVKSAAGLGAILSKGIGNTLRVSLSADPVEEVKVAREL 252
>gi|409391206|ref|ZP_11242898.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
rubripertincta NBRC 101908]
gi|403199019|dbj|GAB86132.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
rubripertincta NBRC 101908]
Length = 395
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 27 RRKTRQLFVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRILQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLE--IVSCPSC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGMEVPLR 318
>gi|217967186|ref|YP_002352692.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dictyoglomus turgidum DSM 6724]
gi|217336285|gb|ACK42078.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dictyoglomus turgidum DSM 6724]
Length = 355
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 178/325 (54%), Gaps = 46/325 (14%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+ TR V VGN+ IG +PIRVQTMT T DV TV ++ R+A +G ++VR+ V K
Sbjct: 3 RKITRVVKVGNIEIGGNNPIRVQTMTKTPTVDVKATVRQIRRLAKKGCEIVRVGVPDKES 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A +IK K IP+VADIHF +AL E DK+R+NPGN + +
Sbjct: 63 ALALGKIK-----KESPIPIVADIHFDYRLALTALEQGVDKLRLNPGNIKNPK------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
S + ++ K G +R+G+N GSL I+ YG + +VESA
Sbjct: 111 ---------------YVSIIAKEAKARGVPIRVGSNAGSLPKEILEKYGGLTSEALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
R+ DF + + S+KAS+ + V+AYRLL ++ DYPLH+G+TEAG G
Sbjct: 156 LNEVRLLEDNDFTDIVISVKASSVPLTVEAYRLLSEKV-----DYPLHIGITEAGTLFPG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
++S++G+G LL +G+GDTIRVSL+ PP+KE++ L +L +R L+ P
Sbjct: 211 TIRSSVGLGILLYEGIGDTIRVSLSAPPDKEVEVAYEILDSLELRRKGLRVLACPM--CA 268
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R +F P+Q+ +E++ R
Sbjct: 269 RSHF---------PVQEVAKEIEKR 284
>gi|404258929|ref|ZP_10962246.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
namibiensis NBRC 108229]
gi|403402709|dbj|GAC00656.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
namibiensis NBRC 108229]
Length = 395
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 27 RRKTRQLFVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRILQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLE--IVSCPSC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGMEVPLR 318
>gi|15613964|ref|NP_242267.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
halodurans C-125]
gi|20138758|sp|Q9KD18.1|ISPG_BACHD RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|10174017|dbj|BAB05120.1| peptidoglycan acetylation [Bacillus halodurans C-125]
Length = 367
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VGN+ IG + + VQ+MTT T DV TV E+ R+ + G +VR+
Sbjct: 5 THRTKTRPVKVGNLTIGGNNEVVVQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVACPDM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A IK K +IPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAAEAIPAIK-----KQISIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGKR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+E V V+ K+ G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ------------HKVEAV----VKAAKEKGIPIRIGVNAGSLEKRILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+RVSL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNMGIGNTVRVSLSADPVEEVKVAREL 252
>gi|167746786|ref|ZP_02418913.1| hypothetical protein ANACAC_01498 [Anaerostipes caccae DSM 14662]
gi|167653746|gb|EDR97875.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Anaerostipes
caccae DSM 14662]
Length = 358
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 168/313 (53%), Gaps = 37/313 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R T+ + +G+ IG +P+ +Q+MT T+DV TV +++ + G D+VR TV
Sbjct: 4 RNNTKVIRIGDKKIGGGNPVLIQSMTNTKTEDVESTVSQILSLEKAGCDIVRCTVPTPEA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA EIK K +IPLVADIHF +A+ E DKIR+NPGN
Sbjct: 64 ADALGEIK-----KRIHIPLVADIHFNYKLAIAAMENGADKIRINPGNIGG--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVESA 262
E+ ++EK K+YG +R+G N GSL ++ ++G + G+VESA
Sbjct: 110 -------------EDRIRAVIEKAKEYGVPIRVGVNSGSLEKELVEKHHGVTAEGLVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ R+ D+ N + S+K+S+ ++ +AY L+ ++ DYPLH+G+TEAG G
Sbjct: 157 VDKVRMIEAFDYDNLVVSIKSSDVLMCARAYELVAEQI-----DYPLHVGITEAGTVYSG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+G+G +L GLGDTIRVSLT P EI + L LG+R ++ V
Sbjct: 212 NIKSAVGLGIILHQGLGDTIRVSLTGDPVNEIASAKLILKTLGLRRGGIE--VVSCPTCG 269
Query: 382 RHYFDFQRRSGQL 394
R D +GQ+
Sbjct: 270 RTNIDLISLAGQV 282
>gi|334136436|ref|ZP_08509902.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
sp. HGF7]
gi|333606046|gb|EGL17394.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
sp. HGF7]
Length = 382
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 153/278 (55%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+ TR V VG++ IG + +Q+M T T DV TV E+ R+ + G LVR+TV
Sbjct: 4 RKDTRPVRVGDLTIGGSDEVIIQSMCTTKTADVKATVAEIHRLEEAGCQLVRVTVNNMEA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA EIK K NIPLV+DIHF +AL E DK+R+NPGN RR++ E
Sbjct: 64 ADAVKEIK-----KQINIPLVSDIHFDHRLALAAIENGIDKVRINPGNIG-RRSKVE--- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+V+ CK+ G +RIG N GSL + ++ YG +P MVESA
Sbjct: 115 ------------------AVVKACKERGIPIRIGVNAGSLENHLLEKYGYPTPEAMVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDFH+ + S+KAS+ + + AY ++YPLHLG+TEAG G
Sbjct: 157 LFHIGILEELDFHDIIVSLKASDVPMAIAAYT-----QAAQAFNYPLHLGITEAGTLFSG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+G LL G+G T+R+SL+ P +E+ R L
Sbjct: 212 TVKSAAGLGALLSMGIGSTMRISLSADPVEEVKVAREL 249
>gi|451818160|ref|YP_007454361.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451784139|gb|AGF55107.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 349
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 150/274 (54%), Gaps = 38/274 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R V VGN+ +G PI VQ+MT TKDV T++++ ++ D G D+VR V +
Sbjct: 3 RRKSRKVKVGNIYVGGNAPITVQSMTNTPTKDVEATLKQIQQLFDAGCDIVRCAVLDMED 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFA--DRRAQFEQ 201
A+ EI K IP+VADIHF +AL+ E +R+NPGN DR
Sbjct: 63 AEKLGEI-----TKKSPIPVVADIHFDYKLALKAIENGVSALRINPGNIGSVDR------ 111
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
L E C + +RIG N GSL I+ YG + G+VE
Sbjct: 112 ------------------IKILKEACVEKQIPIRIGVNSGSLEKDILEKYGMPTAEGLVE 153
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDF++ + S+K+SN +M+ YR M DYPLHLGVTEAG +
Sbjct: 154 SALRHVKILEDLDFYDIVISIKSSNVQMMIDCYR-----MIAEKCDYPLHLGVTEAGTIQ 208
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KS+IGIGTLL +G+GDTIRVSLT P +EI
Sbjct: 209 RGTIKSSIGIGTLLAEGIGDTIRVSLTTDPVQEI 242
>gi|420442100|ref|ZP_14941040.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-36]
gi|420490789|ref|ZP_14989371.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-13]
gi|420524636|ref|ZP_15023043.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-13b]
gi|393058590|gb|EJB59478.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-36]
gi|393106249|gb|EJC06793.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-13]
gi|393130907|gb|EJC31331.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-13b]
Length = 359
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|433608801|ref|YP_007041170.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Saccharothrix
espanaensis DSM 44229]
gi|407886654|emb|CCH34297.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Saccharothrix
espanaensis DSM 44229]
Length = 387
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 175/325 (53%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GSE P+ VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 20 RRKTRQLMVGSVGVGSEFPVSVQSMTTTVTADVNATLQQIAELTASGCDIVRVACPSQDD 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
AD + + + IP++ADIHF P E +RVNPGN ++
Sbjct: 80 AD-----ALAAIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IK 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G +RIG N GSL R+M+ YG +P + ESA
Sbjct: 125 KFDDKVRE-----------IAAAARDHGTPIRIGVNAGSLDPRLMAKYGKATPEALAESA 173
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 174 LWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 228
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL+ G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 229 TIKSAVAFGALLRQGIGDTIRVSLSAPPVEEVKVGHQILQSLNLRPRKLEIVSCP--SCG 286
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 287 RAQVDVYTLAEQVTAGLEGMEVPLR 311
>gi|407803609|ref|ZP_11150443.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alcanivorax sp. W11-5]
gi|407022453|gb|EKE34206.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Alcanivorax sp. W11-5]
Length = 374
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG V +G + PI VQ+MT +T DV TV ++ R+ + GAD+VR++V
Sbjct: 9 RRKTRQIMVGKVPVGGDAPISVQSMTNTETCDVEATVAQIRRLEEVGADIVRVSVPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA-ECFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ K N+PLVADIH+ +AL+VA E D +R+NPGN
Sbjct: 69 AEAFGRIR-----KQVNVPLVADIHYDYKIALKVADEGADCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +++ + +G +RIG N GSL + YG+ +VESA
Sbjct: 115 -------------EDRVRAVIQSARDHGIPIRIGVNAGSLEKELQRKYGEPCSDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A I DFH+F S+KASN + VQAYR L A M + PLHLGVTEAG G
Sbjct: 162 MRHADILTGHDFHDFKVSVKASNVFMTVQAYRKLSALM-----EQPLHLGVTEAGVFRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++ +G LL +G+GDTIR+SL P +EI
Sbjct: 217 TVKSSVALGMLLMEGIGDTIRISLAADPVEEI 248
>gi|90417491|ref|ZP_01225414.1| hypothetical protein GB2207_07432 [gamma proteobacterium HTCC2207]
gi|90330732|gb|EAS46011.1| hypothetical protein GB2207_07432 [marine gamma proteobacterium
HTCC2207]
Length = 374
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRRK+R +MVGNV +G + PI VQ+MT T DVA TV ++ RI GAD+VR++V
Sbjct: 8 VRRKSRQIMVGNVPVGGDAPISVQSMTNTSTADVAATVAQINRIQAAGADIVRVSVPSMA 67
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
EA+A EI+ + ++PLVADIHF +ALRVA+ D +R+NPGN +
Sbjct: 68 EAEAFGEIR-----RLVDVPLVADIHFDHHIALRVADLGVDCLRINPGNISK-------- 114
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E ++ K + +RIG N GSL ++ Y + + MVES
Sbjct: 115 --------------ESRLREVIAKARDLNIPIRIGVNAGSLGKDLLRKYSEPTAEAMVES 160
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + K DF +F S+KAS+ + V AYR L + + PLHLG+TEAG
Sbjct: 161 AMRNVDLLDKYDFQDFKVSVKASDIFMAVSAYRDLATRI-----EQPLHLGITEAGGLRS 215
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKE 353
G +KSAIG+G LL DG+GDT+R+SL P +E
Sbjct: 216 GTVKSAIGLGALLLDGIGDTVRISLAADPAEE 247
>gi|385218888|ref|YP_005780363.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Gambia94/24]
gi|420423612|ref|ZP_14922683.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-4]
gi|420428623|ref|ZP_14927658.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-17]
gi|420430413|ref|ZP_14929441.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-20]
gi|420482193|ref|ZP_14980830.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-2]
gi|420512617|ref|ZP_15011100.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-2b]
gi|317014046|gb|ADU81482.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Gambia94/24]
gi|393041334|gb|EJB42350.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-4]
gi|393046282|gb|EJB47262.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-17]
gi|393047110|gb|EJB48085.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-20]
gi|393099427|gb|EJC00009.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-2]
gi|393157680|gb|EJC57941.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-2b]
Length = 359
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|340752140|ref|ZP_08688948.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 2_1_31]
gi|229421955|gb|EEO37002.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 2_1_31]
Length = 351
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 157/275 (57%), Gaps = 34/275 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
TR V VGN++IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ + A+A
Sbjct: 2 TRIVKVGNLSIGGNNPIIIQSMTNTNSADVEATVKQINELEKAGCQLVRMTINNVKAAEA 61
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLEYTD 206
EIK K N+PLVADIHF +AL E DK+R+NPGN +D
Sbjct: 62 IKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG-----------SD 105
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
+ +K +VE K+ +RIG N GS+ I+ YG +VESA
Sbjct: 106 ENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYGKPCVEALVESALYH 154
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+ K +F + + S+K+SN +MV+AYR + + + +YPLHLGVTEAG G +K
Sbjct: 155 VRLLEKYNFFDIVISLKSSNVKMMVEAYRKISSLV-----NYPLHLGVTEAGTKFQGTVK 209
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
SAIGIG LL DG+G T+RVSLTE P +EI + +
Sbjct: 210 SAIGIGALLVDGIGATLRVSLTENPVEEIKVAKEI 244
>gi|343926738|ref|ZP_08766235.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
alkanivorans NBRC 16433]
gi|343763337|dbj|GAA13161.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
alkanivorans NBRC 16433]
Length = 395
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 27 RRKTRQLFVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRILQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLE--IVSCPSC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGMEVPLR 318
>gi|85712737|ref|ZP_01043782.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Idiomarina
baltica OS145]
gi|85693469|gb|EAQ31422.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Idiomarina
baltica OS145]
Length = 371
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNV IG PI VQ+MT +T DV TVE++ RIA GAD+VR++V
Sbjct: 8 RRPSRRIYVGNVPIGDNAPIAVQSMTNTETTDVQATVEQIKRIAAAGADIVRVSVPTMDA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A L+++ +PLVADIHF +AL+VAE D +R+NPGN
Sbjct: 68 AEAF-----KLIKQQSPVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGR--------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + +RIG N GSL + YG+ +P +VESA
Sbjct: 114 -------------EDRIRAVVDAARDKNIPIRIGVNGGSLERELQEKYGEPTPEALVESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDF +F S+KAS+ + V++YRLL ++ D PLHLG+TEAG G
Sbjct: 161 MRHVDILDRLDFQDFKVSVKASDVFLAVESYRLLAKQI-----DQPLHLGITEAGGLRSG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL +G+GDT+RVSL P +EI
Sbjct: 216 SVKSSIGLGMLLAEGIGDTLRVSLAADPVEEI 247
>gi|119962180|ref|YP_947313.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
aurescens TC1]
gi|166216863|sp|A1R501.1|ISPG_ARTAT RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|119949039|gb|ABM07950.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
aurescens TC1]
Length = 388
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDSPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL IM YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IAAAARDHGTSIRIGVNAGSLEPGIMKKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 286 RAQVDVYTLAEQVTAGLEGMEIPLR 310
>gi|335040511|ref|ZP_08533638.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Caldalkalibacillus thermarum TA2.A1]
gi|334179591|gb|EGL82229.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Caldalkalibacillus thermarum TA2.A1]
Length = 365
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 152/278 (54%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TR V VGNV IG + +Q+MTT T DV TV ++ R+ + G +VR+ R
Sbjct: 5 RTQTRPVRVGNVTIGGNDHVVIQSMTTTKTHDVEATVAQIKRLEEAGCQIVRVACPDMRA 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 65 AEAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGVDKIRINPGNIGKR-------- 111
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V+ K+ G +RIG N GSL RI+ YG + GMVESA
Sbjct: 112 --------------EKVEAVVKAAKERGIPIRIGVNAGSLEKRILEKYGYPTADGMVESA 157
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDFH+ + S+KAS+ + ++AY + ++YPLHLG+TEAG G
Sbjct: 158 LYHISILEELDFHDIVVSLKASDVRLAIEAY-----QKAAKTFNYPLHLGITEAGTLFAG 212
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+G LL G+G TIR+SL+ P +E+ R L
Sbjct: 213 TIKSAAGLGALLAQGIGSTIRISLSADPVEEVRVAREL 250
>gi|444306096|ref|ZP_21141868.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
sp. SJCon]
gi|443481554|gb|ELT44477.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
sp. SJCon]
Length = 388
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 170/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS++PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDYPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL I+ YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IAAAARDHGTSIRIGVNAGSLEPGILKKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 286 RAQVDVYTLAEQVTAGLEGMEIPLR 310
>gi|386746211|ref|YP_006219428.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori HUP-B14]
gi|384552460|gb|AFI07408.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori HUP-B14]
Length = 359
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGSTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|420497597|ref|ZP_14996157.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-25]
gi|420527984|ref|ZP_15026376.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-25c]
gi|420529853|ref|ZP_15028238.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-25d]
gi|393113876|gb|EJC14394.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-25]
gi|393133879|gb|EJC34294.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-25c]
gi|393136182|gb|EJC36573.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-25d]
Length = 359
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ V ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVVRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|365824513|ref|ZP_09366587.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Actinomyces
graevenitzii C83]
gi|365259573|gb|EHM89558.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Actinomyces
graevenitzii C83]
Length = 398
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 163/293 (55%), Gaps = 40/293 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+ TR +MVG+V +G + PI VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 26 RKPTRKIMVGSVPVGGDAPISVQSMTTTKTHDIGATLQQIAELTAAGCDIVRVACPTDKD 85
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K IP++ADIHF P V + +RVNPGN +
Sbjct: 86 AEAL-----PIIAKQSRIPVIADIHFQPKYVYAAIKAGCGAVRVNPGN----------IR 130
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCK---KYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMV 259
DD+ + E CK YG ++RIG N GSL R++ YG +P +V
Sbjct: 131 KFDDQ--------------VAEICKMASDYGVSLRIGVNAGSLDPRLLKKYGKATPEALV 176
Query: 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319
ESA A + + DFH+F S+K ++PV MVQAYRLL + ++PLHLGVTEAG
Sbjct: 177 ESAVWEASLFEENDFHDFKISVKHNDPVTMVQAYRLLSEK-----GNWPLHLGVTEAGPA 231
Query: 320 EDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMRAAELQ 371
G +KS G LL +G+GDTIRVSL+ PP +E+ +L +G+R +L+
Sbjct: 232 FQGTIKSCAAFGVLLAEGIGDTIRVSLSAPPVEEVKVGTKLLEFMGLRPRKLE 284
>gi|402756872|ref|ZP_10859128.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acinetobacter
sp. NCTC 7422]
Length = 371
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG+V +G + PI VQ+MT +T DV TV ++ R AD GAD++R++V
Sbjct: 8 RRPTRKIRVGSVYVGGDAPISVQSMTNTETCDVEATVAQIQRCADAGADIMRVSVPSMEA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A EI+ K ++PLVADIHF +AL VA+ D +R+NPGN
Sbjct: 68 AEAFGEIR-----KRVSVPLVADIHFDHRIALAVADYGADCLRINPGNIGSD-------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
Q + EV V K +G ++RIG N GSL + YG+ + + ++ESA
Sbjct: 115 ----------QKVREV----VAAAKHHGISIRIGVNAGSLEKDLQVKYGEPTGQALLESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDFH F S+KASN + + AYRLL ++ D PLHLGVTEAG G
Sbjct: 161 MRHIDILDRLDFHEFKVSVKASNVFLTMDAYRLLSQQI-----DNPLHLGVTEAGIYRTG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAI +G LL +G+GDT+R+SL PE EI
Sbjct: 216 TVKSAIALGGLLMEGIGDTMRISLAAEPEDEI 247
>gi|169829104|ref|YP_001699262.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lysinibacillus sphaericus C3-41]
gi|238055496|sp|B1HSS4.1|ISPG_LYSSC RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|168993592|gb|ACA41132.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Lysinibacillus sphaericus C3-41]
Length = 371
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 152/278 (54%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R TR V VGN+ IG + + +Q+M T T DV TV E++R+ + G +VR+ V +R
Sbjct: 7 RSNTRPVRVGNLTIGGSNELFIQSMCTTKTHDVEATVAEILRLEEAGCQIVRVAVPDERA 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA EIK K +IPLVADIHF +AL+ E DK+R+NPGN +
Sbjct: 67 ADAIAEIK-----KRIHIPLVADIHFDYRLALKAIENGIDKVRINPGNIGRK-------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V K G +RIG N GSL I+ YG + GMVESA
Sbjct: 114 --------------EKVEAVVNAAKAKGIPIRIGVNAGSLERHILEKYGYPTADGMVESA 159
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + SMKAS+ + ++AY E ++YPLHLG+TE+G G
Sbjct: 160 LHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFNYPLHLGITESGTLFAG 214
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+G +L G+G+T+R+SL+ P +EI R L
Sbjct: 215 TVKSAAGLGAILSKGIGNTLRISLSADPVEEIKVAREL 252
>gi|448748163|ref|ZP_21729808.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacter
[Halomonas titanicae BH1]
gi|445564284|gb|ELY20408.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacter
[Halomonas titanicae BH1]
Length = 375
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNVA+G + PI VQ+MT +T DVA TV ++ ++ GAD+VR++V
Sbjct: 13 RRHSRQIQVGNVAVGGDAPIAVQSMTNTNTLDVAATVAQIQQLEKAGADIVRVSVPDMDA 72
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+ +IK K N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 73 AETFGQIK-----KLVNVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 118
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V + +G +RIG N GSL + YG+ +P +VESA
Sbjct: 119 -------------EDRVRAVVSAARDHGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 165
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V AYR L A + + PLHLG+TEAG G
Sbjct: 166 MRHIDYLDRLDFPDFKVSVKASDVFMAVAAYRDLAARI-----EQPLHLGITEAGGLRSG 220
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDTIRVSL P +EI
Sbjct: 221 TVKSSIGLGMLLMDGIGDTIRVSLAADPVEEI 252
>gi|359433550|ref|ZP_09223877.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20652]
gi|357919806|dbj|GAA60126.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas sp. BSi20652]
Length = 372
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT DT DV TV ++ I + GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTDTMDVDATVAQIQAIQNAGADIVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A IK + IPLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 69 AEAFKSIKEQV-----TIPLVADIHFDYRIALKVAKYGVDCLRINPGNIGS--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ +++ +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDSAREHNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I R+LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVDILRRLDFDQFKISVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +EI
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEI 248
>gi|385249145|ref|YP_005777364.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori F57]
gi|317181940|dbj|BAJ59724.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori F57]
Length = 359
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +R+
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNERD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|420404662|ref|ZP_14903842.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY6271]
gi|393024532|gb|EJB25642.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY6271]
Length = 359
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRSLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|420519407|ref|ZP_15017851.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-5b]
gi|393128499|gb|EJC28943.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-5b]
Length = 359
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|452910821|ref|ZP_21959498.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Kocuria
palustris PEL]
gi|452833993|gb|EME36797.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Kocuria
palustris PEL]
Length = 387
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 161/291 (55%), Gaps = 36/291 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ P+ VQ+MTT T D+ GT++++ + G D+VR+ + +
Sbjct: 19 RRKTRQIRVGSVGVGSDSPVSVQSMTTTPTTDINGTLQQIAELNAAGCDIVRVACPSQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ IP++ADIHF P A C +RVNPGN +
Sbjct: 79 ADAL-----PIIAMKSPIPVIADIHFQPKYVFAAIDAGCAG-VRVNPGN----------I 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
DD+ + + K G ++RIG N GSL R+M YG +P + ES
Sbjct: 123 RKFDDQVGE-----------IARAAKDAGVSIRIGVNAGSLDRRLMEKYGKATPEALAES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K ++PV MV+AY+LL D+PLHLGVTEAG
Sbjct: 172 AQWEASLFEEHDFHDFKISVKHNDPVTMVRAYQLLAER-----GDWPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 371
G +KSA G LL G+GDTIRVSL+ PP +E+ + L +LG+R +L+
Sbjct: 227 GTIKSATAFGALLSQGIGDTIRVSLSAPPVEEVKVGAQILQSLGLRPKKLE 277
>gi|297571188|ref|YP_003696962.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arcanobacterium haemolyticum DSM 20595]
gi|296931535|gb|ADH92343.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arcanobacterium haemolyticum DSM 20595]
Length = 386
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 153/287 (53%), Gaps = 33/287 (11%)
Query: 69 LLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIA 128
L +P K E++ RRKTR + VGNV +G + P+ VQ+MTT T D+ T++++ +
Sbjct: 7 LGIPAVKEPEAVLAP-RRKTRQIQVGNVKVGGDAPVSVQSMTTTKTHDIGATLQQIAELT 65
Query: 129 DQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVN 188
G D++R+ ++ADA ++ IP++ADIHF P + +RVN
Sbjct: 66 ASGCDIIRVACPTDKDADAL-----PIIAAKSQIPVIADIHFQPRYVFAAIDAGCGVRVN 120
Query: 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248
PGN ++ ++ + G A+RIG N GSL R++
Sbjct: 121 PGN---------------------IKKFDDRIPEIAAAANANGTAMRIGINAGSLDPRLL 159
Query: 249 SYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDY 307
YG +P +VESA AR+ FH+F S+K +PV MV+AY+LL D+
Sbjct: 160 KKYGKATPEALVESAVNEARLFEDAGFHDFAISVKHHDPVTMVRAYQLLS-----EAGDW 214
Query: 308 PLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
PLHLGVTEAG G +KS++ G LL G+GDTIRVSL+ PP +E+
Sbjct: 215 PLHLGVTEAGPAFQGTVKSSVAFGALLSQGIGDTIRVSLSAPPVEEV 261
>gi|420420579|ref|ZP_14919665.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4161]
gi|393036270|gb|EJB37310.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4161]
Length = 359
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G+VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGSVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|158313022|ref|YP_001505530.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Frankia sp.
EAN1pec]
gi|254806878|sp|A8L6E2.1|ISPG_FRASN RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|158108427|gb|ABW10624.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Frankia
sp. EAN1pec]
Length = 384
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNV +G + P+ +Q+M T T DV T++++ ++ G +VR+ V + +
Sbjct: 18 RRLSRQIHVGNVPVGGDAPVSIQSMCTTLTSDVNATLQQIAQLTAAGCQIVRVAVPSQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA I + IP++ADIHF P A C +RVNPGN QF
Sbjct: 78 ADALPTIA-----RKSPIPIIADIHFQPKYVFAAIDAGCA-AVRVNPGNIK----QF--- 124
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
DD+ + + K G +RIG N GSL R++ YG +P +VES
Sbjct: 125 ---DDKVGE-----------IARAAKAAGTPIRIGVNAGSLDKRLLEKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DF + S+K ++PV+M+QAYRLL DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHDFRDIKISVKHNDPVIMIQAYRLLA-----QACDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI L +LG+R +L+ +
Sbjct: 226 GTVKSAVAFGALLSEGIGDTIRVSLSAPPIEEIKVASAILESLGLRERKLE--IVSCPSC 283
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 284 GRAQVDVYTLANEVSAGLEGMEVPLR 309
>gi|297562555|ref|YP_003681529.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296847003|gb|ADH69023.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 385
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVGNV +G + P+ VQ+MTT T D+ T++++ + G +VR+ V +
Sbjct: 18 RRKTRQIMVGNVPVGGDAPVSVQSMTTTRTSDINATLQQIAELTAAGCQIVRVAVPTNDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ + IP++ADIHF P + A C +RVNPGN
Sbjct: 78 ADAL-----PIIARKSQIPVIADIHFQPKYVFQAIDAGCA-AVRVNPGN----------- 120
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
++ ++ + + + + G +RIG N GSL R++ YG +P +VES
Sbjct: 121 ----------IKKFDDKVAEIAKAAGEAGTPIRIGVNAGSLDKRLLQKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + + F + S+K ++PVVMV AYR L A DYPLHLGVTEAG
Sbjct: 171 ALWECSLFEEHGFRDIKISVKHNDPVVMVNAYRQLAA-----ACDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +E+ + L +LG+R L+ +
Sbjct: 226 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEVKVGNQILESLGLRERGLE--IVSCPSC 283
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 284 GRAQVDVYTLAEEVTAGLEGMEVPLR 309
>gi|290957029|ref|YP_003488211.1| GcpE2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2)
[Streptomyces scabiei 87.22]
gi|260646555|emb|CBG69652.1| putative GcpE2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase 2) [Streptomyces scabiei 87.22]
Length = 386
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 19 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA S + + IP++ADIHF P E +RVNPGN QF
Sbjct: 79 ADAL-----STIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 125
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G +RIG N GSL R++ YG +P +VESA
Sbjct: 126 --DDKVKE-----------IAQAANDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F + S+K ++PVVMV AYR L A+ DYPLHLGVTEAG G
Sbjct: 173 LWEASLFEEHGFRDIKISVKHNDPVVMVNAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL +G+GDTIRVSL+ PP +EI
Sbjct: 228 TIKSAVAFGALLAEGIGDTIRVSLSAPPVEEI 259
>gi|345853888|ref|ZP_08806757.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
zinciresistens K42]
gi|345634651|gb|EGX56289.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
zinciresistens K42]
Length = 385
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGTVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA S + + +P++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----STIARKSQLPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IARAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV+AY+LL + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMVRAYQLLAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEV 258
>gi|21224045|ref|NP_629824.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
coelicolor A3(2)]
gi|289768771|ref|ZP_06528149.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
lividans TK24]
gi|20138767|sp|Q9KYR9.1|ISPG2_STRCO RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
2; AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase 2
gi|7801268|emb|CAB91132.1| hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289698970|gb|EFD66399.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
lividans TK24]
Length = 385
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGPVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA ++ + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----PVIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P + ESA
Sbjct: 125 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGRATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +EI
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEI 258
>gi|410727066|ref|ZP_11365289.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Clostridium sp. Maddingley MBC34-26]
gi|410599401|gb|EKQ53954.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Clostridium sp. Maddingley MBC34-26]
Length = 359
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGN+ +G + PI VQ+MTT TK+V T+ ++ ++ D G D++R V +
Sbjct: 3 RRESRKIKVGNIYVGGDAPITVQSMTTTRTKNVEDTLNQIRKLYDAGCDIIRCAVLDMDD 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A++ EI K IP+VADIHF +AL+ E +R+NPGN
Sbjct: 63 AESLGEI-----TKKSPIPVVADIHFDYRLALKAIENGVSALRINPGNIG---------- 107
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
I+++ L E C + +RIG N GSL I+ YG + G+VESA
Sbjct: 108 -----------SIDKI-KILKEACSEKKIPIRIGVNSGSLEKDILEKYGMPTAEGLVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I L+FH+ + S+K+SN +M++ YRL+ + DYPLHLGVTEAG + G
Sbjct: 156 LRHVKILEDLNFHDIVISIKSSNVKMMIECYRLIAEK-----CDYPLHLGVTEAGTIQKG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IGIGTLL +G+GDTIRVSLT P +EI
Sbjct: 211 TIKSSIGIGTLLAEGIGDTIRVSLTTDPIEEI 242
>gi|398937804|ref|ZP_10667470.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM41(2012)]
gi|398166572|gb|EJM54666.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM41(2012)]
Length = 369
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VRI+V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRISVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK K +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIK-----KLVKVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVAAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|421711621|ref|ZP_16150964.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R030b]
gi|407212770|gb|EKE82632.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R030b]
Length = 359
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + +YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLV-----NYPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|88799905|ref|ZP_01115477.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Reinekea
blandensis MED297]
gi|88777336|gb|EAR08539.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Reinekea sp.
MED297]
Length = 372
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+V +G + PI VQ+MT +T DVA TV ++ + GADLVR++V
Sbjct: 11 RRKSRKIWVGDVPVGGDAPISVQSMTNTETTDVAATVAQIQALEKAGADLVRVSVPTMEA 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +I++ + NIPL++DIHF +ALRVAE D +R+NPGN
Sbjct: 71 AEAFGKIRSQV-----NIPLISDIHFDYRIALRVAELGVDCLRINPGNIGR--------- 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + +RIG N GSL + YG+ +P +VESA
Sbjct: 117 -------------EDRVRAVVDAARDKNIPIRIGVNAGSLEKDLQKKYGEPTPEALVESA 163
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LD+ NF S+KAS+ + V AYRL+ ++ + PLHLG+TEAG G
Sbjct: 164 MRHIDILDRLDYPNFKLSLKASDVFMTVAAYRLIADQI-----EQPLHLGITEAGGLRSG 218
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++G+G LL DG+GDTIRVSL P +EI
Sbjct: 219 TVKSSVGLGMLLMDGIGDTIRVSLAADPVEEI 250
>gi|403526526|ref|YP_006661413.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
sp. Rue61a]
gi|403228953|gb|AFR28375.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG
[Arthrobacter sp. Rue61a]
Length = 381
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 12 RRKTRQIKVGSVGVGSDSPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 72 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 116
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL IM YG +P +VESA
Sbjct: 117 KFDDQVKE-----------IAAAARDHGTSIRIGVNAGSLEPGIMKKYGKATPEALVESA 165
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G
Sbjct: 166 VWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 220
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 221 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 278
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 279 RAQVDVYTLAEQVTAGLEGMEIPLR 303
>gi|284048709|ref|YP_003399048.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidaminococcus fermentans DSM 20731]
gi|283952930|gb|ADB47733.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Acidaminococcus fermentans DSM 20731]
Length = 355
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 162/285 (56%), Gaps = 35/285 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+RT+ +G V IG E+P+ VQ+MT T+++ TV+++ R+ D+G +++R V
Sbjct: 3 RRKSRTIAIGQVTIGGENPVAVQSMTNTKTENIPATVDQIHRLTDRGCEIIRCAVPTLEA 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EI+ K IPLVADIHF +AL E D +R+NPGN R
Sbjct: 63 AQALKEIR-----KQIAIPLVADIHFDYRLALAALESGVDALRLNPGNIGGR-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
D +K +VE ++ +RIG N GSL ++ YG + +VE+A
Sbjct: 110 ---DRVEK-----------VVEAARQRQVPIRIGVNAGSLPKDLLEKYGHPTAEALVEAA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ I ++D++N + S+KA + + + AYRL+ E DYPLH+G+TEAG G
Sbjct: 156 WRHIHILEEMDYNNIVISLKAHDVPLTLAAYRLMAREC-----DYPLHVGITEAGTIRSG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC-RRLANLGMR 366
+KSA+GIGTLL +G+GDTIRVSLT P EID L +LG+R
Sbjct: 211 LIKSAVGIGTLLAEGIGDTIRVSLTGDPLAEIDAGFEILKSLGLR 255
>gi|407796201|ref|ZP_11143157.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Salimicrobium
sp. MJ3]
gi|407019555|gb|EKE32271.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Salimicrobium
sp. MJ3]
Length = 367
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 153/280 (54%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R+ TR V VGN+ IG + VQ+MTT T DV TV E++R+ + G +VR+
Sbjct: 4 THRKDTRPVKVGNLTIGGSDQVVVQSMTTTKTHDVEATVAEILRLEEAGCQIVRVACPDD 63
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQ 201
R ADA EIK K NIPLV DIHF AL+ E DKIR+NPGN R
Sbjct: 64 RAADAIPEIK-----KRINIPLVVDIHFDYRKALKAIEGGADKIRINPGNIGKR------ 112
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+ +EEV V+ K G +RIG N GSL I+ YG + +GMVE
Sbjct: 113 ------------EKVEEV----VKAAKANGVPIRIGVNAGSLERHILEKYGYPTAQGMVE 156
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I +LDFH+ + S+KAS+ + ++AY E YPLHLG+TE+G
Sbjct: 157 SALHHIQILEELDFHDIIVSLKASDVKLAIEAY-----EKAAEQISYPLHLGITESGTLF 211
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G T+R+SL+ P +E+ R L
Sbjct: 212 AGTVKSAAGLGAILSKGIGSTVRISLSADPVEEVKVAREL 251
>gi|291533208|emb|CBL06321.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Megamonas
hypermegale ART12/1]
Length = 352
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 160/290 (55%), Gaps = 38/290 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+ TR + +G+V IG PI VQ+MT T D TV ++ + D G D+VR+ V
Sbjct: 4 RKMTRQISIGDVKIGGGAPISVQSMTNTKTTDTNATVAQIKALVDAGCDIVRVAVPDMSA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+ + IK+ + ++PLVADIHF +AL+ E D +R+NPGN D
Sbjct: 64 AENIYNIKSQV-----DVPLVADIHFDYRLALKAIEQGIDALRINPGNIGD--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +VE K +RIG N GSL ++++ YG +P +VESA
Sbjct: 110 -------------EERVKAVVEAAKTRNIPIRIGVNAGSLDKKLLAKYGKVTPEALVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E RI KL+F++ S+KA + + + AYRL+ + DYPLHLG+TEAG G
Sbjct: 157 LEHIRILEKLNFYDIKISLKAHDVPLTLDAYRLMSETV-----DYPLHLGITEAGTVNTG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQ 372
+KSA+GIG LL +G+GDT R+SLT P E+ ++AN ++A L++
Sbjct: 212 IIKSAVGIGALLAEGIGDTFRISLTGDPVNEV----KVANEILKALGLKE 257
>gi|420410161|ref|ZP_14909304.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4200]
gi|420433889|ref|ZP_14932894.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-24]
gi|420468795|ref|ZP_14967524.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-10]
gi|420470479|ref|ZP_14969188.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-11]
gi|420507654|ref|ZP_15006163.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-24b]
gi|420509236|ref|ZP_15007738.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-24c]
gi|420533071|ref|ZP_15031432.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M1]
gi|420534647|ref|ZP_15032995.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M2]
gi|420536359|ref|ZP_15034701.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M3]
gi|420538062|ref|ZP_15036392.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M4]
gi|420539885|ref|ZP_15038202.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M5]
gi|420541549|ref|ZP_15039857.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M6]
gi|420543069|ref|ZP_15041363.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M9]
gi|393028474|gb|EJB29560.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4200]
gi|393050304|gb|EJB51264.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-24]
gi|393085912|gb|EJB86591.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-11]
gi|393086206|gb|EJB86884.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-10]
gi|393117507|gb|EJC18008.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-24b]
gi|393120662|gb|EJC21151.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-24c]
gi|393137532|gb|EJC37915.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M1]
gi|393141287|gb|EJC41652.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M2]
gi|393144007|gb|EJC44351.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M3]
gi|393145617|gb|EJC45948.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M4]
gi|393146102|gb|EJC46431.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M5]
gi|393148169|gb|EJC48493.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M6]
gi|393159652|gb|EJC59902.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp M9]
Length = 359
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|358466696|ref|ZP_09176491.1| hypothetical protein HMPREF9093_00965 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068807|gb|EHI78790.1| hypothetical protein HMPREF9093_00965 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 355
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 156/275 (56%), Gaps = 34/275 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
TR + VGN++IG +PI +Q+MT ++ D+ TV ++ + G LVR+T+ + A+A
Sbjct: 2 TRVIKVGNLSIGGNNPIIIQSMTNTNSADIEATVLQINELEKAGCQLVRMTINNLKAAEA 61
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLEYTD 206
EIK K N+PLVADIHF +AL E DK+R+NPGN +D
Sbjct: 62 IKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG-----------SD 105
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
+ +K +VE K+ +RIG N GS+ I+ YG +VESA
Sbjct: 106 ENIKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYGKPCVEALVESALYH 154
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
++ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG G +K
Sbjct: 155 VKLLEKFNFFDIVISLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQGTIK 209
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
SAIGIG LL DG+G T+RVSLTE P +EI + +
Sbjct: 210 SAIGIGALLVDGIGATLRVSLTENPVEEIKVAKEI 244
>gi|304316869|ref|YP_003852014.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778371|gb|ADL68930.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 354
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 163/285 (57%), Gaps = 35/285 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+KT+ V +GN+ IG +PI VQ+MT DTKD+ TV ++ + + G D+VR+ V
Sbjct: 1 MRKKTKEVRIGNIYIGGNNPIAVQSMTNTDTKDIKKTVNQIRDLQNAGCDIVRVAVLDFE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQL 202
A+A EIK K NIP+VADIHF +A+ + DKIR+NPGN
Sbjct: 61 AANAIKEIK-----KEINIPIVADIHFNYRLAIEAIKNGADKIRINPGNIGG-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ + + K G +R+G N GSL I++ YG + G+VES
Sbjct: 108 --------------EDKLKLVADAAKDSGIPIRVGVNSGSLEKDILNKYGGVTAEGIVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + + K F++ + S+K SN + +++Y+L+ ++ +YPLH+GVTEAG
Sbjct: 154 ALKSVSLLEKCGFYDIVISLKTSNVPLTIESYKLISEKV-----NYPLHVGVTEAGTSCS 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGM 365
G +KS+IGIGTLL G+GDTIRVSLT P +E+ ++ L +LG+
Sbjct: 209 GTIKSSIGIGTLLYMGIGDTIRVSLTGNPLEEVKVGKQILKSLGL 253
>gi|420495918|ref|ZP_14994482.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-23]
gi|393112229|gb|EJC12750.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-23]
Length = 359
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|420453454|ref|ZP_14952291.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-8]
gi|393069942|gb|EJB70735.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-8]
Length = 359
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|420408758|ref|ZP_14907913.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4216]
gi|393022920|gb|EJB24035.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4216]
Length = 359
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTLEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|308176783|ref|YP_003916189.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
arilaitensis Re117]
gi|307744246|emb|CBT75218.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
arilaitensis Re117]
Length = 388
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 19 RRKTRQFQVGSVGVGSDSPISVQSMTTTKTYDINATLQQIAELTAAGCDIVRVACPTDKD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ IP++ADIHF P E +RVNPGN QF
Sbjct: 79 AEAL-----KIIAMKSQIPVIADIHFQPKYVYAAIEAGCGAVRVNPGNIR----QF---- 125
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G ++RIG N GSL R+++ YG +P +VESA
Sbjct: 126 --DDQVKE-----------IAQAAKDHGTSIRIGVNAGSLDRRLLAKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV+AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVIMVRAY-----EMLAERGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL G+GDTIRVSL+ PP +E+
Sbjct: 228 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEV 259
>gi|317125365|ref|YP_004099477.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Intrasporangium calvum DSM 43043]
gi|315589453|gb|ADU48750.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Intrasporangium calvum DSM 43043]
Length = 386
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 164/290 (56%), Gaps = 34/290 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR + VG V +GS+ P+ VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 18 RRQTRQIRVGKVGVGSDFPVSVQSMTTTPTTDINATLQQIAELTAAGCDIVRVACPSQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
ADA ++ QK+ IP++ADIHF P V + +RVNPGN
Sbjct: 78 ADAL----PAIAQKS-QIPVIADIHFQPKYVYAAIDAGCAAVRVNPGN------------ 120
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
++ ++ + + K+ G ++RIG N GSL R+++ YG +P +VESA
Sbjct: 121 ---------IREFDDQVGEIARRAKEAGVSIRIGVNAGSLDRRLLAKYGRATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PV MV+AY LL D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHDFHDFKISVKHNDPVTMVRAYELLAER-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA G LL G+GDTIRVSL+ PP +E+ + L +LG+R +L+
Sbjct: 227 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEVKVGSQILMSLGLRPRKLE 276
>gi|157693002|ref|YP_001487464.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
pumilus SAFR-032]
gi|194017707|ref|ZP_03056317.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
pumilus ATCC 7061]
gi|166973785|sp|A8FF87.1|ISPG_BACP2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|157681760|gb|ABV62904.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
pumilus SAFR-032]
gi|194010607|gb|EDW20179.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus
pumilus ATCC 7061]
Length = 370
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 153/280 (54%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+M T T DV TV E+ R+ + G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMATTKTHDVEATVAEIKRLEEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQINIPLVVDIHFDYKLALKAIEAGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL +I+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKKILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNMGIGNTLRISLSADPVEEVKVAREL 252
>gi|421618660|ref|ZP_16059635.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri KOS6]
gi|409779413|gb|EKN59071.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas stutzeri KOS6]
Length = 370
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG+V +G + PI VQ+MT +T DV TV ++ R+A+ GAD+VR++V
Sbjct: 9 RRQSRKIWVGSVPVGGDAPISVQSMTNTETCDVEATVGQIQRLANAGADIVRVSVPSMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QRVQLPLVADIHFDYLIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P+ +VESA
Sbjct: 115 -------------EDRVRAVVDAARDKGIPIRIGVNAGSLEKDLQKKYGEPTPQALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF +F S+KAS+ + V+AYRLL ++ + PLHLG+TEAG G
Sbjct: 162 LRHVDHLDRLDFQDFKVSVKASDVFMAVEAYRLLAGQI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIRVSL P +EI
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRVSLAADPVEEI 248
>gi|154502559|ref|ZP_02039619.1| hypothetical protein RUMGNA_00372 [Ruminococcus gnavus ATCC 29149]
gi|153796751|gb|EDN79171.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Ruminococcus
gnavus ATCC 29149]
Length = 360
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 166/296 (56%), Gaps = 35/296 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R +T+ + +GNV IG HP+ +Q+MT T+DVA TVE+++ + + G +++R V
Sbjct: 11 LRNRTKEIRIGNVWIGGSHPVAIQSMTNTKTEDVAATVEQILALEEAGCEIIRCAVPTME 70
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +A+ E DKIR+NPGN +
Sbjct: 71 AALALKEIK-----KQIHIPLVADIHFDYRLAIAAIENGADKIRINPGNIGSK------- 118
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E +VEK K+Y +R+G N GSL ++ YG + G+VES
Sbjct: 119 ---------------ERVQAVVEKAKEYNVPIRVGVNSGSLEKNLLEKYGGVTAEGIVES 163
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + R+ ++ + N + S+K+S+ ++ V+A+ L+ + YPLH+G+TE+G
Sbjct: 164 ALDKVRMIEEMGYDNLVVSIKSSDVLMCVRAHELIAEKC-----QYPLHVGITESGTVYS 218
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
G +KS++G+G +L +G+G+TIRVSLT P +EI + L LGMR ++ P
Sbjct: 219 GNIKSSVGLGIILHEGIGNTIRVSLTGDPTEEIRTAKLILKTLGMRKGGIEVVSCP 274
>gi|453077986|ref|ZP_21980720.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
triatomae BKS 15-14]
gi|452757621|gb|EME16023.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
triatomae BKS 15-14]
Length = 384
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG V +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQLMVGGVGVGSDHPVSVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + + IP++ADIHF P A C +RVNPGN
Sbjct: 79 ADAL-----ATIARKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R++ YG +P +VES
Sbjct: 123 ----KEFDGRVKEVAKAAG-------DAGIPIRIGVNAGSLDPRLLQKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 172 ALWEAGLFEEHGFGDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R L+ +
Sbjct: 227 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGTQILQSLNLRPRRLE--IVSCPSC 284
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 285 GRAQVDVYTLANEVSAGLEGMEVPLR 310
>gi|407980331|ref|ZP_11161122.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
HYC-10]
gi|407412923|gb|EKF34672.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
HYC-10]
Length = 371
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 153/280 (54%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+M T T DV TV E+ R+ + G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMATTKTHDVEATVAEIKRLEEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQINIPLVVDIHFDYKLALKAIEAGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL +I+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKKILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNMGIGNTLRISLSADPVEEVKVAREL 252
>gi|386755649|ref|YP_006228866.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori PeCan18]
gi|420445251|ref|ZP_14944165.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-42]
gi|420451946|ref|ZP_14950796.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-6]
gi|420499733|ref|ZP_14998287.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-26]
gi|384561907|gb|AFI02373.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori PeCan18]
gi|393063445|gb|EJB64292.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-42]
gi|393069787|gb|EJB70582.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-6]
gi|393149713|gb|EJC50022.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-26]
Length = 359
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|126652205|ref|ZP_01724384.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
B14905]
gi|126590937|gb|EAZ85049.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
B14905]
Length = 371
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 152/278 (54%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R TR V VGN+ IG + + +Q+M T T DV TV E++R+ + G +VR+ V +R
Sbjct: 7 RTNTRPVRVGNLTIGGSNELFIQSMCTTKTHDVDATVAEILRLEEAGCQIVRVAVPDERA 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA EIK K +IPLVADIHF +AL+ E DK+R+NPGN +
Sbjct: 67 ADAIAEIK-----KRIHIPLVADIHFDYRLALKAIENGIDKVRINPGNIGRK-------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V K G +RIG N GSL I+ YG + GMVESA
Sbjct: 114 --------------EKVEAVVNAAKAKGIPIRIGVNAGSLERHILEKYGYPTADGMVESA 159
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + SMKAS+ + ++AY E ++YPLHLG+TE+G G
Sbjct: 160 LHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFNYPLHLGITESGTLFAG 214
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+G +L G+G+T+R+SL+ P +EI R L
Sbjct: 215 TVKSAAGLGAILSKGIGNTLRISLSADPVEEIKVAREL 252
>gi|389571801|ref|ZP_10161889.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
M 2-6]
gi|388428287|gb|EIL86084.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Bacillus sp.
M 2-6]
Length = 371
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 153/280 (54%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R KTR V VG + IG + + +Q+M T T DV TV E+ R+ + G +VR+ +
Sbjct: 5 THRTKTRPVKVGPLTIGGNNEVVIQSMATTKTHDVEATVAEIKRLEEAGCQIVRVACPDE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A +IK K NIPLV DIHF +AL+ E DKIR+NPGN R
Sbjct: 65 RAANAIADIK-----KQINIPLVVDIHFDYKLALKAIEAGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V+ K+ G +RIG N GSL +I+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVKAAKEKGIPIRIGVNAGSLEKKILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAILNMGIGNTLRISLSADPVEEVKVAREL 252
>gi|313115650|ref|ZP_07801106.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310622036|gb|EFQ05535.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 357
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 153/274 (55%), Gaps = 34/274 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ R V +GNV IG ++P+ VQTM +D+ G V + R G ++R+T
Sbjct: 10 MRQLKREVKIGNVTIGGKNPVAVQTMLNVPVEDIEGNVAQAKRCEAAGCQILRVTCPSPA 69
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+A +KN++ NIP+VADIHF AL A+ DKIR+NPGN D
Sbjct: 70 DAKCIEAVKNAV-----NIPIVADIHFDYKAALACADVGVDKIRINPGNIGD-------- 116
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
DD + +V+ C++ +RIG N GSL I++ YG +P MVES
Sbjct: 117 ---DDRVKA-----------VVDACQRKNIPIRIGVNGGSLEKHILAKYGAPTPEAMVES 162
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K DF+N + S+K SN M++AYR L A DYPLH+GVTEAG +
Sbjct: 163 ALYHVRLLEKFDFNNIVISIKNSNVPRMMEAYRQLSAV-----TDYPLHVGVTEAGTYQM 217
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID 355
G +KS +GIG +L +G+GDTIRVSL PEKE++
Sbjct: 218 GLLKSGMGIGGMLLEGIGDTIRVSLAAEPEKEVE 251
>gi|441518981|ref|ZP_21000688.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
hirsuta DSM 44140 = NBRC 16056]
gi|441454130|dbj|GAC58649.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
hirsuta DSM 44140 = NBRC 16056]
Length = 383
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 171/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG V +GS+ PI VQ+M T T D+ T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQLMVGKVGVGSDFPISVQSMCTTPTHDINATLQQIAELTASGCDIVRVACPRQED 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI + IP++ADIHF P A C +RVNPGN
Sbjct: 79 ADALAEIA-----RRSQIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M+ YG +P +VES
Sbjct: 123 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRLMAKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 172 ALWEAGLFEEHGFGDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI L +L +R +L+ +
Sbjct: 227 GTIKSAVAFGALLTEGIGDTIRVSLSAPPAEEIKVGDAILQSLNLRPRKLE--IVSCPSC 284
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 285 GRAQVDVYKLADEVTAGLEGLEVPLR 310
>gi|325962793|ref|YP_004240699.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323468880|gb|ADX72565.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
phenanthrenivorans Sphe3]
Length = 388
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDSPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL I+ YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IAAAARDHGTSIRIGVNAGSLEPGILKKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 286 RAQVDVYTLAEQVTAGLEGMEIPLR 310
>gi|262202053|ref|YP_003273261.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Gordonia
bronchialis DSM 43247]
gi|262085400|gb|ACY21368.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Gordonia
bronchialis DSM 43247]
Length = 394
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 150/273 (54%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 26 RRTTRQIQVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRQED 85
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 86 ADAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 129
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 130 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRLMQKYGKATPEALVES 178
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 179 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 233
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KS++ G LL G+GDTIRVSL+ PP +EI
Sbjct: 234 GTIKSSVAFGALLSQGIGDTIRVSLSAPPAEEI 266
>gi|385215870|ref|YP_005775827.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori F32]
gi|317180399|dbj|BAJ58185.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori F32]
Length = 359
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 154/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTIEAYRMLRSLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|302537251|ref|ZP_07289593.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. C]
gi|302446146|gb|EFL17962.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. C]
Length = 385
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 152/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRVSRKIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA +++ K IP++ADIHF P A C +RVNPGN QF
Sbjct: 78 ADAL-----AVIAKKSQIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGNIK----QF--- 124
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
D+ KE+ H K G +RIG N GSL R++ YG +P +VES
Sbjct: 125 ----DDKVKEIAH----------AAKDAGTPIRIGVNAGSLDARLLKKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AYR L A+ DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFGDIKISVKHNDPVVMVNAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL +G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSEGIGDTIRVSLSAPPVEEV 258
>gi|336431235|ref|ZP_08611089.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae bacterium 2_1_58FAA]
gi|336020157|gb|EGN49874.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae bacterium 2_1_58FAA]
Length = 353
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 166/296 (56%), Gaps = 35/296 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R +T+ + +GNV IG HP+ +Q+MT T+DVA TVE+++ + + G +++R V
Sbjct: 4 LRNRTKEIRIGNVWIGGSHPVAIQSMTNTKTEDVAATVEQILALEEAGCEIIRCAVPTME 63
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +A+ E DKIR+NPGN +
Sbjct: 64 AALALKEIK-----KQIHIPLVADIHFDYRLAIAAIENGADKIRINPGNIGSK------- 111
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E +VEK K+Y +R+G N GSL ++ YG + G+VES
Sbjct: 112 ---------------ERVQAVVEKAKEYNVPIRVGVNSGSLEKNLLEKYGGVTAEGIVES 156
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + R+ ++ + N + S+K+S+ ++ V+A+ L+ + YPLH+G+TE+G
Sbjct: 157 ALDKVRMIEEMGYDNLVVSIKSSDVLMCVRAHELIAEKC-----QYPLHVGITESGTVYS 211
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
G +KS++G+G +L +G+G+TIRVSLT P +EI + L LGMR ++ P
Sbjct: 212 GNIKSSVGLGIILHEGIGNTIRVSLTGDPTEEIRTAKLILKTLGMRKGGIEVVSCP 267
>gi|420460127|ref|ZP_14958926.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-27]
gi|393077229|gb|EJB77978.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-27]
Length = 359
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GM+ESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMIESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|398994139|ref|ZP_10697060.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM21]
gi|398133160|gb|EJM22390.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM21]
Length = 369
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VRI+V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRISVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYRIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|395775841|ref|ZP_10456356.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
acidiscabies 84-104]
Length = 385
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 154/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + + IP++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----ATIARKSQIPVIADIHFQPKYVFSAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVRE-----------IAKAANDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AYR L A+ +YPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYRQLAAQ-----CEYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL +G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSEGIGDTIRVSLSAPPVEEV 258
>gi|392547030|ref|ZP_10294167.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Pseudoalteromonas rubra ATCC 29570]
Length = 372
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 153/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+ + VGNV IG PI VQ+MT +T DV TV ++ IAD GAD+VR++V
Sbjct: 9 RRKSTRINVGNVPIGDGAPIAVQSMTNTNTLDVDATVAQIRAIADAGADIVRVSVPTMEA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A IK + IPLVADIHF +AL+VAE D +R+NPGN +
Sbjct: 69 AEAFKSIK-----EQSEIPLVADIHFDYRIALKVAEYGVDCLRINPGNIGN--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ + +RIG N GSL + YG+ +P ++ESA
Sbjct: 115 -------------EERIRAVVDAARDKNIPIRIGVNGGSLERDLQEKYGEPTPEALLESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I ++LDF F S+KAS+ + V AYRLL E+ D PLHLG+TEAG G
Sbjct: 162 MRHVEILQRLDFDQFKVSVKASDVFLAVGAYRLLAKEI-----DQPLHLGITEAGGMRAG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDT+RVSL P +E+
Sbjct: 217 SVKSAVGLGMLLAEGIGDTLRVSLAADPVQEV 248
>gi|333919260|ref|YP_004492841.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Amycolicicoccus subflavus DQS3-9A1]
gi|333481481|gb|AEF40041.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Amycolicicoccus subflavus DQS3-9A1]
Length = 404
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 172/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS++P+ VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 38 RRKTRQLMVGDVGVGSDYPVSVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRQED 97
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + K IP++ADIHF P E +RVNPGN +
Sbjct: 98 ADAL-----ATIAKKSQIPVIADIHFQPRYIFAAIEAGCAAVRVNPGNIRE--------- 143
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
D Q+ + E +P +RIG N GSL R+++ YG + +VESA
Sbjct: 144 -FDGRVQEVAKAAAEANTP-----------IRIGVNAGSLDPRLLAKYGKPTAEALVESA 191
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F +F S+K ++PVVMV+AY LL + DYPLHLGVTEAG G
Sbjct: 192 LWEASLFEEHGFGDFKISVKHNDPVVMVRAYELLAEQS-----DYPLHLGVTEAGPSFQG 246
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 247 TIKSAVAFGALLSKGIGDTIRVSLSAPPAEEVKVGHQILQSLNLRPRKLEIVSCP--SCG 304
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 305 RAQVDVYTLANEVTAGLEGMEVPLR 329
>gi|331001985|ref|ZP_08325505.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae oral taxon 107 str. F0167]
gi|330411781|gb|EGG91186.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae oral taxon 107 str. F0167]
Length = 352
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 170/297 (57%), Gaps = 37/297 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+KT+ V +G+ IG+ PI +Q+M T++V TVE+++R+ D G D++R+ V
Sbjct: 1 MRKKTKLVQIGDKQIGAGLPILIQSMCNTKTENVKSTVEQILRLEDAGCDIIRVAVPNTE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQ 201
A A +IK K +IPLVADIHF +AL A C DKIR+NPGN
Sbjct: 61 AASAIAQIK-----KQIHIPLVADIHFDYRLALEAIKAGC-DKIRINPGNIGST------ 108
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVE 260
E +V+ C++ +R+G N GSL ++ YG S G+VE
Sbjct: 109 ----------------ERIKAVVDACRERNLPIRVGVNSGSLEKHLIEKYGGVSAEGIVE 152
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA + RI +D++N + S+K+S+ ++ V+A+ L+ + DYPLH+G+TE+G +
Sbjct: 153 SALDKVRIIEYMDYNNMVISIKSSDVMMCVKAHELISEK-----TDYPLHIGITESGTVK 207
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
G +KS++G+G +L G+GDTIRVSLT P +EI + L+NLG++ + ++ P
Sbjct: 208 RGMIKSSLGLGIILYQGIGDTIRVSLTGDPVEEIFAGKLILSNLGLKKSGIEVVSCP 264
>gi|257439600|ref|ZP_05615355.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Faecalibacterium prausnitzii A2-165]
gi|257197967|gb|EEU96251.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Faecalibacterium prausnitzii A2-165]
Length = 348
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/274 (40%), Positives = 151/274 (55%), Gaps = 34/274 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ R V +GNV IG +PI VQTM +D+ G V + R G ++R+T
Sbjct: 1 MRQLKREVKIGNVTIGGNNPIAVQTMLNVPVEDIEGNVAQAKRCEAAGCQILRVTCPSAA 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
+A +KN++ NIP+VADIHF AL A+ DKIR+NPGN D
Sbjct: 61 DAKCIEAVKNAV-----NIPIVADIHFDYKAALACADVGVDKIRINPGNIGD-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS-PRGMVES 261
DD + +V+ C++ +RIG N GSL I++ YG P MVES
Sbjct: 108 ---DDRVKA-----------VVQACQQKNIPIRIGVNGGSLEKHILAKYGAPVPEAMVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K DF+N + S+K SN M++AYR L A DYPLH+GVTEAG +
Sbjct: 154 ALYHVRLLEKFDFNNIVISIKNSNVPRMMEAYRQLSAV-----TDYPLHVGVTEAGTYQM 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID 355
G +KS +GIG +L +G+GDTIRVSL PEKE++
Sbjct: 209 GLLKSGMGIGGMLLEGIGDTIRVSLAAEPEKEVE 242
>gi|317058980|ref|ZP_07923465.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium sp. 3_1_5R]
gi|313684656|gb|EFS21491.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Fusobacterium sp. 3_1_5R]
Length = 357
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 159/284 (55%), Gaps = 35/284 (12%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
RK+R V + ++ +G +P+ +Q+MT +T DV TV +++ + + G +LVR+T+ K A
Sbjct: 7 RKSREVQIRDLKLGKGNPVIIQSMTNTETSDVKATVRQILDLEEAGCELVRMTINTKEAA 66
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEY 204
A IK + +IPLVADIHF +AL E DK+R+NPGN F
Sbjct: 67 MAIPAIKERV-----HIPLVADIHFDYRLALLAMENGIDKLRINPGNIGSEDKIF----- 116
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAF 263
+VEK K+ +RIG N GSL I+ YG + MVESA
Sbjct: 117 -----------------LVVEKAKEKKIPIRIGVNSGSLEKHILEKYGTVTADAMVESAM 159
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
++ K F++ + S+KASN +MV+AYR + + DYPLHLGVTEAG G
Sbjct: 160 YHVKLLEKYGFYDIVISLKASNVAMMVEAYRKIQTLV-----DYPLHLGVTEAGTAFQGS 214
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
+KS+IGIG+LL D +GDTIRVSLTE P +EI + L LG+R
Sbjct: 215 IKSSIGIGSLLVDDIGDTIRVSLTENPVEEIKVAKEILKVLGLR 258
>gi|347542458|ref|YP_004857095.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-rat-Yit]
gi|346985494|dbj|BAK81169.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Arthromitus sp. SFB-rat-Yit]
Length = 349
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 152/266 (57%), Gaps = 34/266 (12%)
Query: 91 VMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFE 150
V +GN+ IG +PI +Q+MT +TKD+ T+ ++ + +G D+VRI V +E +
Sbjct: 9 VNIGNIKIGGCNPIAIQSMTNTNTKDINATINQINSLEKEGCDIVRIAVTDNQEVECIPT 68
Query: 151 IKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLEYTDDEY 209
IK KN NIPLVADI F +AL + DK+R+NPGN +
Sbjct: 69 IK-----KNTNIPLVADIQFDYKIALGCIKNGIDKVRINPGNIGN--------------- 108
Query: 210 QKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESAFEFARI 268
E+ +V C +YG +RIG N GSL I+S YG + +VES + +
Sbjct: 109 -------EDKVREVVNACDEYGIPIRIGVNGGSLQKDILSKYGRKTTDALVESVLKNVDL 161
Query: 269 CRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAI 328
K F N + S+K+S+ +M+++Y+ + +E+ +YPLHLGVTEAG G +KS+I
Sbjct: 162 LEKFRFKNIVISVKSSDVDMMIESYKKISSEV-----NYPLHLGVTEAGLFLSGAVKSSI 216
Query: 329 GIGTLLQDGLGDTIRVSLTEPPEKEI 354
GIGTLL +G+GDTIRVSLT+ P EI
Sbjct: 217 GIGTLLHNGIGDTIRVSLTDDPVNEI 242
>gi|289767668|ref|ZP_06527046.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
lividans TK24]
gi|289697867|gb|EFD65296.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
lividans TK24]
Length = 384
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 171/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG VA+G P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 19 RRVSRRIQVGPVAVGGGAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA ++ + IP++ADIHF P E +RVNPGN QF
Sbjct: 79 ADAL-----PVIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 125
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P + ESA
Sbjct: 126 --DDKVKE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALAESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG G
Sbjct: 173 LWEASLFEEHDFRDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA+ G LL G+GDTIRVSL+ PP +EI + L +LG+R L+ +
Sbjct: 228 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEIKVGIQILQSLGLRERRLE--IVSCPSCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 286 RAQVDVYKLAEEVTAGLEGMEVPLR 310
>gi|206900497|ref|YP_002250512.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dictyoglomus
thermophilum H-6-12]
gi|206739600|gb|ACI18658.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dictyoglomus
thermophilum H-6-12]
Length = 355
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 160/273 (58%), Gaps = 34/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KTR V VGN+AIG ++PIRVQ+MT T D+ TV ++ R+A +G +++R+ V K
Sbjct: 3 RKKTRVVKVGNIAIGGDNPIRVQSMTKTPTVDIKSTVRQIKRLAKKGCEIIRLGVPDKES 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A +IK K IP+VADIHF +AL E DK+R+NPGN + +
Sbjct: 63 ALALGKIK-----KASPIPIVADIHFDYRLALIALEQGVDKLRLNPGNIKNPK------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVESA 262
S + ++ K G +R+G+N GSL I+ Y G +P +VESA
Sbjct: 111 ---------------YISLIAKEAKARGVPIRVGSNAGSLPKEILEKYNGLTPEALVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
R+ DF + + S+KAS+ + V+AYRLL ++ DYPLH+G+TE+G G
Sbjct: 156 LHEVRLLEDNDFTDIVISVKASSVPLTVEAYRLLSQKV-----DYPLHIGITESGTVFPG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID 355
++S++G+G LL +G+GDTIRVSL P+KE++
Sbjct: 211 TIRSSVGLGILLYEGIGDTIRVSLASSPDKEVE 243
>gi|323356834|ref|YP_004223230.1| hypothetical protein MTES_0386 [Microbacterium testaceum StLB037]
gi|323273205|dbj|BAJ73350.1| enzyme [Microbacterium testaceum StLB037]
Length = 380
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 162/291 (55%), Gaps = 36/291 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +G + P+ VQ+MTT T ++ T++++ + G ++VR+ V + +
Sbjct: 15 RRKTRQIKVGKVLVGGDAPVSVQSMTTTPTTNINATLQQIAELTASGCEIVRVAVPSQDD 74
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
AD ++ K IP++ADIHF P + A C +RVNPGN
Sbjct: 75 ADVLH-----IIAKKSQIPVIADIHFQPKYVFQAIDAGC-GAVRVNPGN----------- 117
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
++ ++ + + K G ++RIG N GSL R++ YG +P +VES
Sbjct: 118 ----------IRKFDDQVGAIAKAAKDAGVSLRIGVNAGSLDRRLLEKYGKATPEALVES 167
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K ++P+VMV+AYRLL D+PLHLGVTEAG
Sbjct: 168 AVWEASLFEEHDFHDFKISVKHNDPIVMVKAYRLLAER-----GDWPLHLGVTEAGPAFQ 222
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
G +KSA G LL +G+GDTIRVSL+ PP +E+ + L +L +R +L+
Sbjct: 223 GTIKSATAFGILLSEGIGDTIRVSLSAPPAEEVKVGHQILQSLNLRERKLE 273
>gi|217032002|ref|ZP_03437503.1| hypothetical protein HPB128_187g29 [Helicobacter pylori B128]
gi|298736319|ref|YP_003728845.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori B8]
gi|216946312|gb|EEC24918.1| hypothetical protein HPB128_187g29 [Helicobacter pylori B128]
gi|298355509|emb|CBI66381.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori B8]
Length = 359
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|145224661|ref|YP_001135339.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
gilvum PYR-GCK]
gi|315444991|ref|YP_004077870.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
gilvum Spyr1]
gi|145217147|gb|ABP46551.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
gilvum PYR-GCK]
gi|315263294|gb|ADU00036.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
gilvum Spyr1]
Length = 391
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 168/326 (51%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR +MVG+V +GS+HPI VQ+M T T D+ T++++ + G D+VR+ + +
Sbjct: 22 RRKTRQLMVGDVGVGSDHPIAVQSMCTTKTHDINATLQQIAELTASGCDIVRVACPRQED 81
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA I K NIP++ADIHF P A C +RVNPGN
Sbjct: 82 ADALPAIA-----KKANIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 125
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 126 ----KEFDGRVKEVAKAAG-------DAGIPIRIGVNAGSLDPRILKKYGKATPEALVES 174
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV AY L A+ DYPLHLGVTEAG
Sbjct: 175 AMWEASLFEEHGFGDIKISVKHNDPVIMVAAYEQLAAQ-----CDYPLHLGVTEAGPAFQ 229
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL G+GDTIRVSL+ PP +E+ + L +L +R L+ +
Sbjct: 230 GTIKSAVAFGALLSKGIGDTIRVSLSAPPAEEVKVGNQILESLNLRPRGLE--IVSCPSC 287
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG EV R
Sbjct: 288 GRAQVDVYTLANEVTAGLEGLEVPLR 313
>gi|77460822|ref|YP_350329.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fluorescens Pf0-1]
gi|398978323|ref|ZP_10687698.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM25]
gi|123603393|sp|Q3K7B6.1|ISPG_PSEPF RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|77384825|gb|ABA76338.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas fluorescens Pf0-1]
gi|398137123|gb|EJM26189.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM25]
Length = 369
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|420421973|ref|ZP_14921051.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4110]
gi|393038491|gb|EJB39525.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4110]
Length = 359
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|387782374|ref|YP_005793087.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthetase
[Helicobacter pylori 51]
gi|261838133|gb|ACX97899.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthetase
[Helicobacter pylori 51]
Length = 359
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|237745060|ref|ZP_04575541.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 7_1]
gi|229432289|gb|EEO42501.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 7_1]
Length = 358
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 157/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V V N+ IG +PI +Q+MT ++ DV TV+++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVANLKIGGNNPIIIQSMTNTNSADVEATVKQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQL 202
A+A EIK K ++PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KKVSLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILKKYSKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K +F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFEFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTVKSAIGIGALLIDGIGDTLRVSLTENPVEEIKVAKEI 247
>gi|315917464|ref|ZP_07913704.1| isoprenoid biosynthesis protein [Fusobacterium gonidiaformans ATCC
25563]
gi|313691339|gb|EFS28174.1| isoprenoid biosynthesis protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 357
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 159/284 (55%), Gaps = 35/284 (12%)
Query: 86 RKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREA 145
RK+R V + ++ +G +P+ +Q+MT +T DV TV +++ + + G +LVR+T+ K A
Sbjct: 7 RKSREVQIRDLKLGKGNPVIIQSMTNTETSDVEATVRQILDLEEAGCELVRMTINTKEAA 66
Query: 146 DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEY 204
A IK + +IPLVADIHF +AL E DK+R+NPGN F
Sbjct: 67 MAIPAIKERV-----HIPLVADIHFDYRLALLAMENGIDKLRINPGNIGSEDKIF----- 116
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAF 263
+VEK K+ +RIG N GSL I+ YG + MVESA
Sbjct: 117 -----------------LVVEKAKEKKIPIRIGVNSGSLEKHILEKYGTVTADAMVESAM 159
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
++ K F++ + S+KASN +MV+AYR + + DYPLHLGVTEAG G
Sbjct: 160 YHVKLLEKYGFYDIVISLKASNVAMMVEAYRKIQTLV-----DYPLHLGVTEAGTAFQGS 214
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
+KS+IGIG+LL D +GDTIRVSLTE P +EI + L LG+R
Sbjct: 215 IKSSIGIGSLLVDDIGDTIRVSLTENPVEEIKVAKEILKVLGLR 258
>gi|404214645|ref|YP_006668840.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Gordonia
sp. KTR9]
gi|403645444|gb|AFR48684.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Gordonia
sp. KTR9]
Length = 395
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 27 RRKTRQFFVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRILQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAA-----ACDYPLHLGVTEAGPSFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 235 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLE--IVSCPSC 292
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 293 GRAQVDVYKLADEVTAGLEGMEVPLR 318
>gi|424862913|ref|ZP_18286826.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [SAR86 cluster
bacterium SAR86A]
gi|400757534|gb|EJP71745.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [SAR86 cluster
bacterium SAR86A]
Length = 368
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 154/271 (56%), Gaps = 33/271 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KT+T+MVG+V +G ++PI +Q+MT DT DV TV+++ + GAD+VR++V G E
Sbjct: 8 RKKTKTIMVGSVPVGGDNPISIQSMTNTDTCDVVSTVKQIKDLELAGADIVRVSVPGYEE 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A EIK K N+PLVADIHF +AL VA+ D +R+NPGN
Sbjct: 68 AKAFKEIK-----KAVNVPLVADIHFDYKIALEVADTADCLRINPGNIGKE--------- 113
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAF 263
++EV + + +R+G N GSL + YG+ + +VESA
Sbjct: 114 ---------DRVKEVINAATDN----NVPIRVGVNAGSLEKDLQKKYGEPNADALVESAL 160
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
I + +F N+ S+KASN + V AYR V+++ PLHLG+TEAG G
Sbjct: 161 RHVEILDRFNFENYKMSLKASNIEMTVDAYR-KVSDLIKQ----PLHLGITEAGSFRAGT 215
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL +G+GDTIR+SL P EI
Sbjct: 216 VKSSIGVGMLLSEGIGDTIRISLASDPVDEI 246
>gi|420416947|ref|ZP_14916053.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4044]
gi|393035219|gb|EJB36265.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4044]
Length = 359
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VA+G + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAVGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|384899067|ref|YP_005774446.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori F30]
gi|317179010|dbj|BAJ56798.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori F30]
Length = 359
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|407363606|ref|ZP_11110138.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
mandelii JR-1]
Length = 369
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VRI+V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRISVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVAAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|338813323|ref|ZP_08625452.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Acetonema
longum DSM 6540]
gi|337274682|gb|EGO63190.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Acetonema
longum DSM 6540]
Length = 359
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 158/287 (55%), Gaps = 36/287 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+RR TR + +G V IG PI VQ+MT T ++ TVE++ R+ + G D+VRI +
Sbjct: 3 LRRDTRPIYIGKVGIGGHMPISVQSMTNTKTTNIPATVEQIHRLTEAGCDIVRIAIPDMA 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A A +KNS+ ++PLVADIHF +A+ V E D +R+NPGN D
Sbjct: 63 AAQAVESLKNSV-----SVPLVADIHFDYRLAIAVLERGIDALRINPGNIGDPSG----- 112
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD--SPRGMVE 260
+V + +K +RIG N GSL ++++ YG +P MVE
Sbjct: 113 -----------------VRAVVTEAQKRRVPIRIGVNAGSLDKKLLAKYGGHPTPEAMVE 155
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA E +I +LDF + S+KA++ ++AY L+ + +YPLHLG+TEAG
Sbjct: 156 SALEHIKILEELDFFDIKISLKANDVPTTIRAYTLMSEQ-----ANYPLHLGITEAGTIS 210
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
G +KSA+GIG LL G+GDTIRVSLT P +E+ L +LG+R
Sbjct: 211 SGVIKSAVGIGALLAQGIGDTIRVSLTGDPVEEVKVASEILKSLGLR 257
>gi|152995385|ref|YP_001340220.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Marinomonas sp. MWYL1]
gi|189045789|sp|A6VV06.1|ISPG_MARMS RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|150836309|gb|ABR70285.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Marinomonas sp. MWYL1]
Length = 370
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 158/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R +MVGNV +G PI VQ+MT +T DV TV ++ IAD GAD+VR+++
Sbjct: 9 RRHSRQIMVGNVPVGGGAPISVQSMTNTETCDVDATVAQIRAIADAGADIVRVSIPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A +I+ ++ +IPLVADIHF +AL+VAE D +R+NPGN ++
Sbjct: 69 AEAFKKIREAV-----SIPLVADIHFDYKIALKVAEYGVDCLRINPGNIGNK-------- 115
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ +V+ + +RIG N GSL + YG+ +P +VESA
Sbjct: 116 --------------DRIRAVVDCARDKNIPIRIGVNAGSLEKDLQKKYGEPTPDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
F + +LDFH + S+KAS+ + V+AYR + +++ D PLHLG+TEAG G
Sbjct: 162 FRQIQYFDELDFHEYKLSLKASDIFMTVEAYRKIASQI-----DNPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDT+RVSL P EI
Sbjct: 217 TVKSSIGLGLLLMDGIGDTLRVSLAADPVHEI 248
>gi|308182786|ref|YP_003926913.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori PeCan4]
gi|308064971|gb|ADO06863.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori PeCan4]
Length = 359
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNVPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|209965913|ref|YP_002298828.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Rhodospirillum centenum SW]
gi|209959379|gb|ACJ00016.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Rhodospirillum centenum SW]
Length = 377
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 159/287 (55%), Gaps = 39/287 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVG + +G + PI VQTMT T D T+E++ R+ + GAD+VR++ +
Sbjct: 13 RRKSRQIMVGTMPVGGDAPISVQTMTNTVTADAKATIEQIRRVEEAGADIVRVSCPDQES 72
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNF--ADRRAQFEQ 201
+A EI K IP+VADIHF A+ AE +R+NPGN ADR A+
Sbjct: 73 TEALKEI-----VKAARIPIVADIHFHYRRAIEAAEAGASCLRINPGNIGSADRVAE--- 124
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVE 260
+V+ K +G ++RIG N GSL ++ YG+ P +VE
Sbjct: 125 ---------------------VVKAAKDHGCSIRIGVNAGSLEQSLLEKYGEPCPEALVE 163
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA + ARI DF NF S+KAS+ + V AY+ L DYPLH+G+TEAG
Sbjct: 164 SAMDHARILEDHDFRNFKISVKASDVFLAVAAYQGLA-----EACDYPLHIGITEAGGLR 218
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPC-RRLANLGMR 366
G +KS+IG+G LL G+GDTIRVSL+ P +E+ L +LG+R
Sbjct: 219 AGTVKSSIGLGMLLWSGIGDTIRVSLSADPVEEVKVAYEMLKSLGLR 265
>gi|294785872|ref|ZP_06751160.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 3_1_27]
gi|294487586|gb|EFG34948.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Fusobacterium
sp. 3_1_27]
Length = 346
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 155/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+ R TR V VGN+ IG +PI +Q+MT ++ DV T ++ + G LVR+T+ +
Sbjct: 1 MERNTRVVKVGNLKIGGNNPIIIQSMTNTNSADVEATARQINELEKAGCQLVRMTINNIK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK K N+PLVADIHF +AL E DK+R+NPGN
Sbjct: 61 AAEAIKEIK-----KRVNLPLVADIHFDYRLALLAIENGIDKLRINPGNIG--------- 106
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
+D+ +K +VE K+ +RIG N GS+ I+ Y +VES
Sbjct: 107 --SDENVKK-----------VVEAAKEKNIPIRIGVNSGSIEKEILEKYTKPCVDALVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A R+ K F + + S+K+SN +MV+AYR + + + DYPLHLGVTEAG
Sbjct: 154 AMYHIRLLEKFKFFDIIVSLKSSNVKMMVEAYRKISSLV-----DYPLHLGVTEAGTKFQ 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSAIGIG LL DG+GDT+RVSLTE P +EI + +
Sbjct: 209 GTIKSAIGIGALLVDGIGDTLRVSLTENPVEEIKVAKEI 247
>gi|152965397|ref|YP_001361181.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Kineococcus
radiotolerans SRS30216]
gi|151359914|gb|ABS02917.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Kineococcus radiotolerans SRS30216]
Length = 386
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +G + P+ VQ+MTT T ++ T++++ + G D+VR+ +
Sbjct: 18 RRKTRKIKVGSVDVGGDAPVSVQSMTTTPTTNINATLQQIAELTATGCDIVRVACPTNDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K IP++ADIHF P E +RVNPGN +
Sbjct: 78 AEAL-----PIIAKKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G ++RIG N GSL R+++ YG +P +VESA
Sbjct: 123 KFDDQVKE-----------IAQAAKDHGTSIRIGVNAGSLDPRLLAKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PVVMV+AY LL D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHDFHDFKISVKHNDPVVMVRAYELLSER-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEV 258
>gi|421714881|ref|ZP_16154199.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R036d]
gi|407215735|gb|EKE85573.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R036d]
Length = 359
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|208434546|ref|YP_002266212.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori G27]
gi|254779386|ref|YP_003057491.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori B38]
gi|308184411|ref|YP_003928544.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori SJM180]
gi|383749704|ref|YP_005424807.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori ELS37]
gi|384897336|ref|YP_005772764.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Lithuania75]
gi|420413577|ref|ZP_14912701.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4099]
gi|420448642|ref|ZP_14947522.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-44]
gi|420456956|ref|ZP_14955775.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-16]
gi|420458463|ref|ZP_14957273.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-26]
gi|420464076|ref|ZP_14962851.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-4]
gi|420472209|ref|ZP_14970902.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-18]
gi|420480658|ref|ZP_14979301.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-1]
gi|420483972|ref|ZP_14982598.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-3]
gi|420487321|ref|ZP_14985925.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-8]
gi|420502842|ref|ZP_15001378.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-41]
gi|420511156|ref|ZP_15009643.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-1b]
gi|420514242|ref|ZP_15012715.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-3b]
gi|420521104|ref|ZP_15019535.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-8b]
gi|420531114|ref|ZP_15029489.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-28b]
gi|421710126|ref|ZP_16149483.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R018c]
gi|421723404|ref|ZP_16162658.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R056a]
gi|425432891|ref|ZP_18813431.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori GAM100Ai]
gi|226741014|sp|B5Z6Z7.1|ISPG_HELPG RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|208432475|gb|ACI27346.1| 1-hydroxy-2-methyl-2-(E)-butenyl4-diphosphate synthetase
[Helicobacter pylori G27]
gi|254001297|emb|CAX29276.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Helicobacter pylori B38]
gi|308060331|gb|ADO02227.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori SJM180]
gi|317012441|gb|ADU83049.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Lithuania75]
gi|380874450|gb|AFF20231.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori ELS37]
gi|393029564|gb|EJB30645.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4099]
gi|393065996|gb|EJB66824.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-44]
gi|393074354|gb|EJB75114.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-16]
gi|393075984|gb|EJB76738.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-26]
gi|393078518|gb|EJB79258.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-4]
gi|393089026|gb|EJB89667.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-18]
gi|393096674|gb|EJB97271.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-1]
gi|393100839|gb|EJC01412.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-3]
gi|393101898|gb|EJC02464.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-8]
gi|393119640|gb|EJC20130.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-1b]
gi|393127691|gb|EJC28136.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-8b]
gi|393139140|gb|EJC39521.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-28b]
gi|393150714|gb|EJC51019.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-41]
gi|393158705|gb|EJC58965.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-3b]
gi|407210317|gb|EKE80196.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R018c]
gi|407224427|gb|EKE94203.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R056a]
gi|410714558|gb|EKQ72025.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori GAM100Ai]
Length = 359
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|420479187|ref|ZP_14977836.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-34]
gi|393095429|gb|EJB96033.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-34]
Length = 359
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKTVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|405981541|ref|ZP_11039868.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Actinomyces
neuii BVS029A5]
gi|404392465|gb|EJZ87525.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Actinomyces
neuii BVS029A5]
Length = 383
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 158/291 (54%), Gaps = 36/291 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R+KTR V +GN+ +G + P+ VQ+M T T D+ GT++++ + G D+VR+ +
Sbjct: 20 RKKTRKVRLGNLWVGGDAPVTVQSMCTTKTTDIGGTLQQIAELTAAGCDIVRVACPSADD 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE--CFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K NIP++ADIHF P E C +RVNPGN Q E +
Sbjct: 80 AEAL-----PIIAKKSNIPVIADIHFQPRYVFAAIEGGCAG-VRVNPGNIRKFDDQIEDI 133
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
V+ + +G ++RIG N GSL ++ YG +P MVES
Sbjct: 134 ---------------------VKAARDHGTSLRIGVNAGSLHPKLYKKYGGATPEAMVES 172
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + DFH+F S+K +PV M++ Y LL ++ D+PLHLGVTEAG
Sbjct: 173 AVWEASLFEQYDFHDFAISVKHHDPVTMIKTYELLSSK-----GDWPLHLGVTEAGPALQ 227
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQ 371
G +KSA G LL+ G+GDTIRVSL+ PP +E+ L +LG+R L+
Sbjct: 228 GTVKSATAFGALLRQGIGDTIRVSLSAPPVEEVKVGVEILQSLGLRDRTLE 278
>gi|421716710|ref|ZP_16156019.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R037c]
gi|407219931|gb|EKE89742.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R037c]
Length = 359
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|386748147|ref|YP_006221355.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
cetorum MIT 99-5656]
gi|384554389|gb|AFI06145.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
cetorum MIT 99-5656]
Length = 357
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +GNVAIG + I VQ+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKRIFIGNVAIGGDAKISVQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL +E D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIASESVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +++ CK+ +RIG N GSL + YG +P+GM+ESA
Sbjct: 111 -------------DKIKAVIDACKEKNIPIRIGVNAGSLEKQFDQKYGATPKGMIESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ DF NF S+KAS+ +QAYR+L + +YP HLGVTEAG +
Sbjct: 158 NAKLLEDFDFTNFKISLKASDVERTMQAYRMLRPLV-----NYPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|377559572|ref|ZP_09789119.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
otitidis NBRC 100426]
gi|377523242|dbj|GAB34284.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
otitidis NBRC 100426]
Length = 394
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 152/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS++P+ VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 27 RRKTRQIHVGSVGVGSDYPVSVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRQED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 ADAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RIM YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRIMQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KS++ G+LL G+GDTIRVSL+ PP +EI
Sbjct: 235 GTIKSSVAFGSLLSQGIGDTIRVSLSAPPAEEI 267
>gi|404422330|ref|ZP_11004022.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
gi|403657514|gb|EJZ12286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
Length = 384
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 151/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V IGSEHPI VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQLNVGGVGIGSEHPIAVQSMCTTKTHDVNSTLQQIAELTASGCDIVRVACPRQED 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP++ADIHF P A C +RVNPGN
Sbjct: 79 ADALAEIA-----RHSQIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 122
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R++ YG +P +VES
Sbjct: 123 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRLLQKYGKATPEALVES 171
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + + + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 172 ALWEASLFEEHGYGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 226
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL +G+GDTIRVSL+ PP +E+
Sbjct: 227 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEV 259
>gi|374605363|ref|ZP_09678294.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
dendritiformis C454]
gi|374389038|gb|EHQ60429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
dendritiformis C454]
Length = 365
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 156/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R +TR V VGNV IG + + +Q+M T T DV TV E+ R+ + G +VR+TV +
Sbjct: 3 LRHQTRPVQVGNVTIGGSNDVIIQSMCTTKTADVQATVAEIHRLEEAGCQIVRVTVNNEE 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK K +IPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 63 AAEAIKEIK-----KQISIPLVADIHFDYRLALKAIENGIDKVRINPGNIG-RRHKVEA- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+V+ CK+ G +RIG N GSL ++ YG +P MVES
Sbjct: 116 --------------------VVQACKERGIPIRIGVNAGSLEHHLLEKYGYPTPEAMVES 155
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I +LDFH+ + S+KAS+ + + AY AE+ YPLHLG+TEAG
Sbjct: 156 ALFHIGILEELDFHDIIVSLKASDVPMAIAAYT-KAAEV----IPYPLHLGITEAGTLFS 210
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G LL G+G T+RVSL+ P +E+ R L
Sbjct: 211 GTIKSAAGLGALLSLGIGSTVRVSLSADPVEEVKVAREL 249
>gi|340627861|ref|YP_004746313.1| putative GCPE protein [Mycobacterium canettii CIPT 140010059]
gi|433627988|ref|YP_007261617.1| Conserved protein of unknown function, probable GcpE protein
[Mycobacterium canettii CIPT 140060008]
gi|433643059|ref|YP_007288818.1| Conserved protein of unknown function, probable GcpE protein
[Mycobacterium canettii CIPT 140070008]
gi|340006051|emb|CCC45221.1| putative GCPE protein [Mycobacterium canettii CIPT 140010059]
gi|432155594|emb|CCK52845.1| Conserved protein of unknown function, probable GcpE protein
[Mycobacterium canettii CIPT 140060008]
gi|432159607|emb|CCK56916.1| Conserved protein of unknown function, probable GcpE protein
[Mycobacterium canettii CIPT 140070008]
Length = 387
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 148/273 (54%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR +MVGNV +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 18 RRATRQLMVGNVGVGSDHPVSVQSMCTTKTHDVNSTLQQIAELTAAGCDIVRVACPRQED 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP+VADIHF P A C +RVNPGN
Sbjct: 78 ADALAEIA-----RHSQIPVVADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 121
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ + + + G +RIG N GSL R M YG +P +VES
Sbjct: 122 ----KEFDGRVGEV-------AKAAGAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AY LL A+ DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFGDIKISVKHNDPVVMVAAYELLAAQ-----CDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSRGIGDTIRVSLSAPPVEEV 258
>gi|456388505|gb|EMF53945.1| gcpE protein [Streptomyces bottropensis ATCC 25435]
Length = 378
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 11 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 70
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA ++ + IP++ADIHF P E +RVNPGN QF
Sbjct: 71 ADAL-----PVIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 117
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G +RIG N GSL R++ YG +P +VESA
Sbjct: 118 --DDKVKE-----------IAQAANDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 164
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F + S+K ++PVVMV AYR L A+ DYPLHLGVTEAG G
Sbjct: 165 LWEASLFEEHGFRDIKISVKHNDPVVMVNAYRQLAAQ-----CDYPLHLGVTEAGPAFQG 219
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL +G+GDTIRVSL+ PP +EI
Sbjct: 220 TIKSAVAFGALLSEGIGDTIRVSLSAPPVEEI 251
>gi|421718246|ref|ZP_16157545.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R038b]
gi|407221512|gb|EKE91316.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R038b]
Length = 359
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVV-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|90408605|ref|ZP_01216760.1| GcpE [Psychromonas sp. CNPT3]
gi|90310297|gb|EAS38427.1| GcpE [Psychromonas sp. CNPT3]
Length = 369
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 157/273 (57%), Gaps = 34/273 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
VRR ++ +MVGNVA+G + PI VQ+MT T DV TV ++ R+ GADLVRI++
Sbjct: 8 VRRLSKKIMVGNVAVGGDAPISVQSMTNTLTTDVDATVAQIQRLEAVGADLVRISIPTMN 67
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK K ++PL+ADIHF +AL+VAE D +R+NPGN +
Sbjct: 68 AAEAFKEIK-----KRTSLPLIADIHFDYRIALKVAEYGVDCLRINPGNIGN-------- 114
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ +V+ + Y +RIG N GSL I YG+ + +VES
Sbjct: 115 --------------EQRIRSVVDCARHYNIPIRIGVNGGSLETDIQEKYGEPTAAALVES 160
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I ++L+F F S+KAS+ ++ V++Y+LL E+ PLHLG+TEAG
Sbjct: 161 AMRHVDILQRLNFDEFKVSVKASDALLAVESYQLLAKEI-----QQPLHLGITEAGGLRS 215
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+G+G LL G+GDT+RVSL P +EI
Sbjct: 216 GSVKSAVGMGLLLAQGIGDTLRVSLAADPVEEI 248
>gi|433631964|ref|YP_007265592.1| Conserved protein of unknown function, probable GcpE protein
[Mycobacterium canettii CIPT 140070010]
gi|432163557|emb|CCK60975.1| Conserved protein of unknown function, probable GcpE protein
[Mycobacterium canettii CIPT 140070010]
Length = 387
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 148/273 (54%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR +MVGNV +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 18 RRATRQLMVGNVGVGSDHPVSVQSMCTTKTHDVNSTLQQIAELTAAGCDIVRVACPRQED 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP+VADIHF P A C +RVNPGN
Sbjct: 78 ADALAEIA-----RHSQIPVVADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 121
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ + + + G +RIG N GSL R M YG +P +VES
Sbjct: 122 ----KEFDGRVGEV-------AKAAGAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AY LL A+ DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFGDIKISVKHNDPVVMVAAYELLAAQ-----CDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSRGIGDTIRVSLSAPPVEEV 258
>gi|420504267|ref|ZP_15002794.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-62]
gi|393154679|gb|EJC54960.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-62]
Length = 359
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RFKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|384891005|ref|YP_005765138.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Helicobacter pylori 908]
gi|385223677|ref|YP_005783603.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Helicobacter pylori 2017]
gi|385231528|ref|YP_005791447.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Helicobacter pylori 2018]
gi|307637314|gb|ADN79764.1| 1-hydroxy-2-methyl-2-E-butenyl 4-diphosphate synthase [Helicobacter
pylori 908]
gi|325995905|gb|ADZ51310.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Helicobacter pylori 2018]
gi|325997499|gb|ADZ49707.1| 1-hydroxy-2-methyl-2-E-butenyl 4-diphosphate synthase [Helicobacter
pylori 2017]
Length = 359
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 151/276 (54%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A+ LDF NF S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKFLEDLDFTNFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|329888693|ref|ZP_08267291.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Brevundimonas
diminuta ATCC 11568]
gi|328847249|gb|EGF96811.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Brevundimonas
diminuta ATCC 11568]
Length = 383
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVG+V +G + PI VQ+MT T D A T+E++ ++ + GAD+VR++ E
Sbjct: 18 RRKSRQIMVGSVPVGGDAPISVQSMTNTPTTDAAATLEQIRQLEEAGADIVRVSCP-DEE 76
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDK-IRVNPGNFADRRAQFEQLE 203
+ A F + + +PLVADIHF + A+ +R+NPGN
Sbjct: 77 STAAFRT----IAREARVPLVADIHFHYKRGIEAAQAGAACLRINPGNIGS--------- 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ ++EV V+ + +G ++RIG N GSL ++ YG+ P MVESA
Sbjct: 124 ---------IERVKEV----VQAARDHGCSMRIGVNAGSLEKELLEKYGEPCPDAMVESA 170
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
ARI + LDFH F S+KAS+P + V AY+ L + D PLHLGVTEAG G
Sbjct: 171 LNHARILQDLDFHEFKISVKASDPFLTVAAYQQLADAI-----DCPLHLGVTEAGPLRTG 225
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G +L G+GDTIRVSL P +EI
Sbjct: 226 TIKSAIGMGNMLWSGIGDTIRVSLAADPVEEI 257
>gi|311744136|ref|ZP_07717942.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromicrobium
marinum DSM 15272]
gi|311313266|gb|EFQ83177.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Aeromicrobium
marinum DSM 15272]
Length = 382
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 170/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG V +G + PI VQ+MTT T DV T++++ + G D+VR+ + +
Sbjct: 18 RRPTRKIKVGTVDVGGDAPISVQSMTTTLTSDVNSTLQQIAELTAAGCDIVRVACPSQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
ADA +I + IP++ADIHF P V + +RVNPGN QF
Sbjct: 78 ADALPDIA-----RKSQIPVIADIHFQPKYVYAAIDAGCAAVRVNPGNIR----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
DD+ + + K G ++RIG N GSL R+M YG +P +VESA
Sbjct: 125 --DDQ-----------VGAIAKAAKDAGVSIRIGVNAGSLDKRLMEKYGRATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PV+MVQAY EM D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHDFHDFKISVKHNDPVIMVQAY-----EMLSERGDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +E+ + L +L +R +L+ P
Sbjct: 227 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEVKVGLQILQSLNLRERKLEIVSCP--SCG 284
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG EV R
Sbjct: 285 RAQVDVYTLAEQVTAGLEGLEVPLR 309
>gi|410658720|ref|YP_006911091.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dehalobacter sp. DCA]
gi|410661709|ref|YP_006914080.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dehalobacter sp. CF]
gi|409021075|gb|AFV03106.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dehalobacter sp. DCA]
gi|409024065|gb|AFV06095.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Dehalobacter sp. CF]
Length = 356
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 166/291 (57%), Gaps = 38/291 (13%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR V +G+VAIG HP+ +Q+MT DT+DV T+ ++ +A+ G +++R+ V ++
Sbjct: 3 RRITREVKIGSVAIGGNHPVVIQSMTNTDTRDVQATLSQIRHLAEIGCEIIRMAVLNEQA 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLE 203
A A +I + IP+VADIHF +AL+ VA +R+NPGN +R
Sbjct: 63 ALALKDICSL-----SPIPVVADIHFDYRLALKAVANGVHGLRINPGNIGER-------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++E+ + + E+ +RIG N GSL I+ YG + GMVESA
Sbjct: 110 ----------WKVQEIINAVRER----NIPIRIGVNTGSLEKEILEKYGGPTAEGMVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I + ++HN S+K+S+ +M+ AYR M H DYPLH+GVTEAG G
Sbjct: 156 LGHVGILEQENYHNIKISLKSSHVPLMIDAYR-----MIAHRVDYPLHVGVTEAGTVRSG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQG 373
+KSAIGIGTLL +G+GDTIRVSLT P EI +++ +R +L++G
Sbjct: 211 VVKSAIGIGTLLAEGIGDTIRVSLTGDPAAEIPVAQQI----LRVLDLKKG 257
>gi|444432090|ref|ZP_21227249.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia soli
NBRC 108243]
gi|443886919|dbj|GAC68970.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia soli
NBRC 108243]
Length = 400
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG+V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 32 RRTTRQIQVGSVGVGSDHPISVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRPED 91
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN + + +++
Sbjct: 92 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNIKEFDGRVKEV 145
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
K G +RIG N GSL R++ YG +P +VES
Sbjct: 146 ALA---------------------AKDAGIPIRIGVNAGSLDPRLLKKYGKATPEALVES 184
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 185 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 239
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KS++ G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 240 GTIKSSVAFGALLSQGIGDTIRVSLSAPPAEEIKVGDQILQSLNLRPRKLE--IVSCPSC 297
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 298 GRAQVDVYKLADEVTAGLEGMEVPLR 323
>gi|210134832|ref|YP_002301271.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori P12]
gi|226741013|sp|B6JLL3.1|ISPG_HELP2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|210132800|gb|ACJ07791.1| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthetase
[Helicobacter pylori P12]
Length = 359
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL R YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKRFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|441509968|ref|ZP_20991880.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
aichiensis NBRC 108223]
gi|441445983|dbj|GAC49841.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
aichiensis NBRC 108223]
Length = 394
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 152/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS++P+ VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 27 RRKTRQIHVGSVGVGSDYPVSVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRQED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 ADAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RIM YG +P +VES
Sbjct: 131 ----KEFDGRVKEVAKAAG-------DAGIPIRIGVNAGSLDKRIMQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KS++ G+LL G+GDTIRVSL+ PP +EI
Sbjct: 235 GTIKSSVAFGSLLSQGIGDTIRVSLSAPPAEEI 267
>gi|220912186|ref|YP_002487495.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Arthrobacter
chlorophenolicus A6]
gi|254806862|sp|B8HG44.1|ISPG_ARTCA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|219859064|gb|ACL39406.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Arthrobacter chlorophenolicus A6]
Length = 388
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 169/325 (52%), Gaps = 36/325 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIKVGSVGVGSDSPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A ++ + IP++ADIHF P E +RVNPGN +
Sbjct: 79 AEAL-----PIIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL I+ YG +P +VESA
Sbjct: 124 KFDDQVKE-----------IAAAARDHGTSIRIGVNAGSLEPGILKKYGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + FH+F S+K ++PV+MV AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHGFHDFKISVKHNDPVIMVAAY-----EMLAEKGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEKH 381
+KSA G LL G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 TIKSATAFGALLSRGIGDTIRVSLSAPPVEEIKVGNQILQSLNLRPRKLEIVSCP--SCG 285
Query: 382 RHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + Q+ EG E+ R
Sbjct: 286 RAQVDVYTLAEQVTAGLEGMEIPLR 310
>gi|222151449|ref|YP_002560605.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Macrococcus
caseolyticus JCSC5402]
gi|254806881|sp|B9E6U1.1|ISPG_MACCJ RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|222120574|dbj|BAH17909.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Macrococcus
caseolyticus JCSC5402]
Length = 371
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R+ TR V VG++ IG + + +Q+MTT T DV TV E+ R+ + G +VR+ +
Sbjct: 5 THRKNTRPVKVGDLTIGGSNELVIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRVACPKE 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
+A A EIK K NIPLV DIHF +AL E DKIR+NPGN R
Sbjct: 65 EDALAIAEIK-----KQINIPLVVDIHFDYKLALLAIEGGADKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
+ +EEV V+ CK G +RIG N GSL I+ YG + GMVE
Sbjct: 114 ------------EKVEEV----VKACKAKGIPIRIGVNAGSLEKHILKKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + ++AY +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVNLAIEAYT-----KAAQAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G ++ G+G+T+R+SL+ P +E+ R L
Sbjct: 213 AGTVKSAAGLGAIMSLGIGNTLRISLSADPVEEVKVAREL 252
>gi|308070423|ref|YP_003872028.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
polymyxa E681]
gi|305859702|gb|ADM71490.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Paenibacillus polymyxa E681]
Length = 372
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 155/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V VGN+ IG + + +Q+M T T DV TV E++R+ + G LVR+TV +
Sbjct: 3 LRQDTRPVKVGNLTIGGSNEVLIQSMCTTKTADVEATVAEILRLEEAGCQLVRVTVNNEE 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +AL E DK+R+NPGN RR + E
Sbjct: 63 AAAAIKEIK-----KRIHIPLVADIHFNHKLALLAIENGIDKVRINPGNIG-RREKVEA- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+V+ CK+ G +RIG N GSL ++ YG +P MVES
Sbjct: 116 --------------------VVKACKEKGIPIRIGVNAGSLEQHLLDKYGYPTPEAMVES 155
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I +LDFH+ + S+KAS+ + + AY AE+ YPLHLG+TEAG
Sbjct: 156 ALYHIGILEELDFHDIIVSLKASDVPMAIAAYT-KAAEI----IKYPLHLGITEAGTLFT 210
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G LL G+G T+R+SL+ P +E+ R L
Sbjct: 211 GTVKSAAGMGALLASGIGSTMRISLSADPVEEVKVAREL 249
>gi|420401601|ref|ZP_14900794.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY6081]
gi|393019063|gb|EJB20208.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY6081]
Length = 359
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|420475466|ref|ZP_14974137.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-21]
gi|393093573|gb|EJB94190.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-21]
Length = 359
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELEDEIKVARAI 248
>gi|298345302|ref|YP_003717989.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mobiluncus
curtisii ATCC 43063]
gi|315656364|ref|ZP_07909253.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|298235363|gb|ADI66495.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mobiluncus
curtisii ATCC 43063]
gi|315492923|gb|EFU82525.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 396
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 150/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KTR + VG+VA+G + P+ VQ+MTT T DVA T++++ + G D++R+ +
Sbjct: 32 RHKTRKIQVGSVAVGGDAPVSVQSMTTTLTSDVAATLQQIAELTAAGCDIIRVACPSADD 91
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EI K IP+VADIHF P + E +RVNPGN +
Sbjct: 92 AAALPEI-----CKRSTIPVVADIHFQPKYVFQAIEAGCGAVRVNPGN----------IR 136
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + +G A+RIG N GSL R+ +G + + ESA
Sbjct: 137 SFDDQVRE-----------IARAATDHGTALRIGVNAGSLDKRLYEKFGGATAEALAESA 185
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + +DFH+F S+K NPV M++AYRLL HG D+PLHLGVTEAG G
Sbjct: 186 MWEASLFEDVDFHDFAISVKHHNPVTMIRAYRLLAQ----HG-DWPLHLGVTEAGPTFQG 240
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL +G+GDTIRVSL+ PP +E+
Sbjct: 241 TIKSATAFGALLSEGIGDTIRVSLSAPPVEEV 272
>gi|330807647|ref|YP_004352109.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|378948959|ref|YP_005206447.1| protein GcpE [Pseudomonas fluorescens F113]
gi|398874322|ref|ZP_10629533.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM74]
gi|398893850|ref|ZP_10646359.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM55]
gi|398911101|ref|ZP_10655362.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM49]
gi|398924363|ref|ZP_10661152.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM48]
gi|398952435|ref|ZP_10674783.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM33]
gi|399003837|ref|ZP_10706486.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM18]
gi|423097171|ref|ZP_17084967.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fluorescens Q2-87]
gi|423695455|ref|ZP_17669945.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fluorescens Q8r1-96]
gi|426407852|ref|YP_007027951.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. UW4]
gi|327375755|gb|AEA67105.1| (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase,
(1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
synthase) [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|359758973|gb|AEV61052.1| GcpE [Pseudomonas fluorescens F113]
gi|388009011|gb|EIK70262.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fluorescens Q8r1-96]
gi|397888019|gb|EJL04502.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fluorescens Q2-87]
gi|398121581|gb|EJM11204.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM18]
gi|398155189|gb|EJM43643.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM33]
gi|398173488|gb|EJM61322.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM48]
gi|398183472|gb|EJM70955.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM55]
gi|398184711|gb|EJM72147.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM49]
gi|398195391|gb|EJM82438.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM74]
gi|426266069|gb|AFY18146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
sp. UW4]
Length = 369
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYRIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|254382088|ref|ZP_04997450.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. Mg1]
gi|194340995|gb|EDX21961.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. Mg1]
Length = 385
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 172/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG+VA+G + PI VQ+MTT T DV T++++ + G ++VR+ + +
Sbjct: 18 RRVSRKIQVGSVAVGGDAPISVQSMTTTRTSDVGATLQQIAELTASGCNIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA +++ K IP++ADIHF P A C +RVNPGN QF
Sbjct: 78 ADAL-----AVIAKKSQIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGNIK----QF--- 124
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
DD+ ++ + K G +RIG N GSL R++ YG +P +VES
Sbjct: 125 ---DDKVKE-----------IARAAKDAGTPIRIGVNAGSLDARLLKKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AYR L A DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFSDIKISVKHNDPVVMVNAYRQLAA-----ACDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L ++ L+ P
Sbjct: 226 GTIKSAVAFGALLSEGIGDTIRVSLSAPPVEEIKVGIQILESLNLKPRRLEIVSCP--SC 283
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 284 GRAQVDVYKLAEEVTAGLEGMEVPLR 309
>gi|407476699|ref|YP_006790576.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Exiguobacterium antarcticum B7]
gi|407060778|gb|AFS69968.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Exiguobacterium antarcticum B7]
Length = 369
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 159/286 (55%), Gaps = 35/286 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KTR V VG++ IG + + +Q+MTT T DV TV E++R+ + G +VR+ +R+
Sbjct: 7 RSKTRPVRVGDLVIGGSNEVIIQSMTTTKTHDVEATVAEILRLEEAGCQIVRVACPEERD 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EIK+ + NIPLV DIHF +AL E DKIR+NPGN RR + E
Sbjct: 67 ALALAEIKSRI-----NIPLVVDIHFNYKLALMAIEAGVDKIRINPGNIG-RREKVEA-- 118
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
+V K +RIG N GSL I+ YG + RGMVESA
Sbjct: 119 -------------------VVTAAKAKNIPIRIGVNAGSLEKHILEKYGYPTARGMVESA 159
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + S+KAS+ + ++AY+L +DYPLH+G+TE+G G
Sbjct: 160 LHHIKILEDLDFHDIIVSLKASDVQLALEAYQL-----ASESFDYPLHVGITESGPLRTG 214
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRA 367
+KSA G+G +L G+G+T+RVSL+ P +E+ + L + G+ A
Sbjct: 215 SLKSAAGLGAILSRGIGNTVRVSLSADPVEEVKVAKEVLKSFGLAA 260
>gi|297202724|ref|ZP_06920121.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sviceus ATCC 29083]
gi|197713303|gb|EDY57337.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sviceus ATCC 29083]
Length = 385
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGTVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + + +P++ADIHF P E +RVNPGN QF
Sbjct: 78 ADAL-----ATIARKSQLPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIK----QF---- 124
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + + +G +RIG N GSL R++ YG +P +VESA
Sbjct: 125 --DDKVKE-----------IAKAARDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AY+ L A+ DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYKQLAAQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPVEEV 258
>gi|390455658|ref|ZP_10241186.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
peoriae KCTC 3763]
Length = 372
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 155/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V VGN+ IG + + +Q+M T T DV TV E++R+ + G LVR+TV +
Sbjct: 3 LRQDTRPVKVGNLTIGGSNEVIIQSMCTTKTADVEATVAEILRLEEAGCQLVRVTVNNEE 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +AL E DK+R+NPGN RR + E
Sbjct: 63 AAAAIKEIK-----KRIHIPLVADIHFNYKLALLAIENGIDKVRINPGNIG-RREKVEA- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+V CK+ G +RIG N GSL ++ YG +P MVES
Sbjct: 116 --------------------VVNACKEKGIPIRIGVNAGSLEQHLLDKYGYPTPEAMVES 155
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I +LDFH+ + S+KAS+ + + AY + AE+ YPLHLG+TEAG
Sbjct: 156 ALYHIGILEELDFHDIIVSLKASDVPMAIAAY-MKAAEI----IKYPLHLGITEAGTLFT 210
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G LL G+G T+R+SL+ P +E+ R L
Sbjct: 211 GTVKSAAGMGALLASGIGSTMRISLSADPVEEVKVAREL 249
>gi|299537682|ref|ZP_07050971.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lysinibacillus fusiformis ZC1]
gi|424735437|ref|ZP_18163900.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lysinibacillus fusiformis ZB2]
gi|298726661|gb|EFI67247.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lysinibacillus fusiformis ZC1]
gi|422950094|gb|EKU44463.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lysinibacillus fusiformis ZB2]
Length = 371
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 152/278 (54%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R TR V VGN+ IG + + +Q+M T T DV TV E++R+ + G +VR+ V +R
Sbjct: 7 RSNTRPVRVGNLTIGGSNELFIQSMCTTKTHDVEATVAEILRLEEAGCQVVRVAVPDERA 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA EIK K +IPLVADIHF +AL+ E DK+R+NPGN +
Sbjct: 67 ADAIAEIK-----KRIHIPLVADIHFDYRLALKAIENGIDKVRINPGNIGRK-------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V K G +RIG N GSL I+ YG + GMVESA
Sbjct: 114 --------------EKVEAVVNAAKAKGIPIRIGVNAGSLERHILEKYGYPTADGMVESA 159
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + SMKAS+ + ++AY E ++YPLHLG+TE+G G
Sbjct: 160 LHHIKILEDLDFHDIIVSMKASDVNLAIEAY-----EKASKAFNYPLHLGITESGTLFAG 214
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+G +L G+G+T+R+SL+ P +E+ R L
Sbjct: 215 TVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVAREL 252
>gi|147677597|ref|YP_001211812.1| hypothetical protein PTH_1262 [Pelotomaculum thermopropionicum SI]
gi|146273694|dbj|BAF59443.1| predicted enzyme [Pelotomaculum thermopropionicum SI]
Length = 349
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 151/272 (55%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR V VG V +G P+ VQ+MT DT+D A T++++ +A +G ++VR+ V
Sbjct: 3 RRKTRPVFVGKVQVGGGAPVSVQSMTNTDTRDAAATIKQINELAAEGCEIVRVAVPDWEA 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A ++ KN +IPLVADIHF +AL + D +R+NPGN R
Sbjct: 63 AGAL-----PVIVKNISIPLVADIHFDYRLALEAIKAGVDGLRINPGNIGGRNRVEAVAA 117
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ G +RIG N GSL R++ YG +P MVESA
Sbjct: 118 AA----------------------RERGIPIRIGVNAGSLEKRLLEKYGGVTPLAMVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I L+F N S+KASN +M++AYRLL ++ DYPLH+GVTEAG G
Sbjct: 156 LNHIKILEDLNFDNIKVSLKASNLRLMIEAYRLLSEKV-----DYPLHVGVTEAGTLCYG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+GIG LL +G+GDTIRVSLT P E+
Sbjct: 211 TVKSALGIGILLNEGIGDTIRVSLTGHPRHEV 242
>gi|222529792|ref|YP_002573674.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Caldicellulosiruptor bescii DSM 6725]
gi|222456639|gb|ACM60901.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Caldicellulosiruptor bescii DSM 6725]
Length = 348
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 162/289 (56%), Gaps = 38/289 (13%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
T+ V +GN+ IG PIR+Q+MT TKDV TVE+++ + G D++R+ V A A
Sbjct: 5 TKKVRIGNLYIGGGEPIRIQSMTNTKTKDVEATVEQILSLESLGCDIIRVAVPDLDSAKA 64
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLEYTD 206
+IK+ + +IPLVADIHF +AL + DKIR+NPGN + R E
Sbjct: 65 ISKIKSRI-----HIPLVADIHFDYKLALEAIYNGADKIRINPGNIGNERKVQE------ 113
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESAFEF 265
+ ++ K+YG AVR+G N GSL D + Y P +VE+A
Sbjct: 114 ----------------IAKEAKRYGIAVRVGANSGSLPKDILQKYKSPVPEAIVEAAIYQ 157
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
++ K DF N + S+K+S+ + +++Y E+ +YPLH+G+TEAG G +K
Sbjct: 158 VKLLEKFDFDNIVVSVKSSDVLTTIKSY-----EILSQNLNYPLHVGLTEAGTFVAGTVK 212
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
S+I IG LL G+GDTIRVSLT+ PEKE+ + + +++ L++GV
Sbjct: 213 SSIAIGYLLLRGIGDTIRVSLTDSPEKEVIVAKEI----LKSLNLRKGV 257
>gi|425745623|ref|ZP_18863666.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acinetobacter
baumannii WC-323]
gi|425488061|gb|EKU54401.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acinetobacter
baumannii WC-323]
Length = 371
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG+V +G + PI VQ+MT +T DV TV ++ R AD GAD++R++V
Sbjct: 8 RRPTRKIRVGSVYVGGDAPISVQSMTNTETCDVDATVAQIQRCADAGADIMRVSVPSMEA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ K +PLVADIHF +AL VA+ D +R+NPGN
Sbjct: 68 AEAFGAIR-----KRVTVPLVADIHFDHRIALAVADYGADCLRINPGNIGSD-------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
Q + EV V K +G ++RIG N GSL + + YG+ + + ++ESA
Sbjct: 115 ----------QKVREV----VAAAKHHGISIRIGVNAGSLEKDLQAKYGEPTGQALLESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDFH F S+KASN + + AYRLL ++ D PLHLGVTEAG G
Sbjct: 161 MRHIDILDRLDFHEFKVSVKASNVFLTMDAYRLLSQQI-----DNPLHLGVTEAGIYRTG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAI +G LL +G+GDT+R+SL PE EI
Sbjct: 216 TVKSAIALGGLLMEGIGDTMRISLAAEPEDEI 247
>gi|425735408|ref|ZP_18853722.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Brevibacterium casei S18]
gi|425479814|gb|EKU46986.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Brevibacterium casei S18]
Length = 382
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 152/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS++PI VQ+MTT T D+ T++++ + G D+VR+ +
Sbjct: 19 RRKTRQIHVGKVGVGSDYPISVQSMTTTPTTDINATLQQIAELTASGCDIVRVACPSADD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A A ++ QK+ IP++ADIHF P V + +RVNPGN +
Sbjct: 79 AAAL----PAIAQKS-QIPVIADIHFQPKYVYAAIDAGCAAVRVNPGN----------IR 123
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + K G ++RIG N GSL RIM +G +P +VESA
Sbjct: 124 KFDDQVKE-----------IAAAAKDAGTSIRIGVNAGSLDKRIMEKFGKATPEALVESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K +PV+MV+AY EM D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEEHDFHDFKISVKHHDPVIMVRAY-----EMLAERGDWPLHLGVTEAGPAFQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL G+GDTIRVSL+ PP +E+
Sbjct: 228 TIKSATAFGALLSKGIGDTIRVSLSAPPVEEV 259
>gi|421712943|ref|ZP_16152274.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R32b]
gi|407216309|gb|EKE86146.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R32b]
Length = 359
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVIRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|402313203|ref|ZP_10832124.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae bacterium ICM7]
gi|400366963|gb|EJP19983.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Lachnospiraceae bacterium ICM7]
Length = 352
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 176/326 (53%), Gaps = 37/326 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+KTR V +G+ IG + PI +Q+M T DV TV++++R+ D G D++R+ V
Sbjct: 1 MRKKTRLVQIGDKYIGGDMPILIQSMCNTKTDDVKATVDQILRLEDAGCDIIRVAVPNSE 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +AL + DKIR+NPGN
Sbjct: 61 AASAISEIK-----KQIHIPLVADIHFDYRLALEAIKSGCDKIRINPGNIGS-------- 107
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E +V+ CK+ +R+G N GSL ++ YG + G+VES
Sbjct: 108 --------------SERIKAVVDACKERNLPIRVGVNSGSLEKNLIEKYGGVTAEGIVES 153
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A + +I + ++N + S+K+S+ ++ V+A+ E+ DYPLH+G+TE+G +
Sbjct: 154 ALDKVKIIEDMYYNNLVISIKSSDVMMCVKAH-----ELISQRTDYPLHIGITESGTVKR 208
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KS++G+G +L G+GDT+RVSLT P +EI + L NLG+R ++ V
Sbjct: 209 GMIKSSLGLGIILYQGIGDTVRVSLTGDPVEEIFAAKLILNNLGLRKGGIE--VVSCPTC 266
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D +G++ EG +++ +
Sbjct: 267 GRTNIDLIGLAGKVEKLVEGYDLNIK 292
>gi|167766538|ref|ZP_02438591.1| hypothetical protein CLOSS21_01044 [Clostridium sp. SS2/1]
gi|167711661|gb|EDS22240.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Clostridium
sp. SS2/1]
gi|291558577|emb|CBL37377.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[butyrate-producing bacterium SSC/2]
Length = 353
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 165/290 (56%), Gaps = 35/290 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TR + +G+V IG +P+ +Q+MT T++V TV++++ + G ++R TV +
Sbjct: 4 RNQTRVISIGDVKIGGGNPVAIQSMTNTKTENVEETVKQILALEKAGCQIIRCTVPTMKA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK K +IPLVADIHF +A+ E DKIR+NPGN
Sbjct: 64 AEAFTEIK-----KQIHIPLVADIHFDYKLAIAAMEHGADKIRINPGNIGG--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY-GDSPRGMVESA 262
EE +VE KKY +R+G N GSL ++ Y G + +G+VESA
Sbjct: 110 -------------EENIRKVVETAKKYHVPIRVGVNSGSLEKPLVKKYNGVTAQGLVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ + K DFH+ + S+K+S+ ++ +AYRL+ ++ +YPLH+G+TEAG G
Sbjct: 157 LDKVAMLEKYDFHDMVVSIKSSDVLMCAEAYRLVADKI-----NYPLHVGITEAGTVFSG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA+G+G +L G+GDTIRVSLT P EI + L LG+R+ ++
Sbjct: 212 NIKSAVGLGIILNQGIGDTIRVSLTGDPVNEIASAKLILKTLGLRSGGIE 261
>gi|429769390|ref|ZP_19301500.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Brevundimonas
diminuta 470-4]
gi|429187054|gb|EKY27974.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Brevundimonas
diminuta 470-4]
Length = 397
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R +MVG+V +G PI VQ+MT T D A T+E++ ++ + GAD+VR++ E
Sbjct: 32 RRKSRQIMVGSVPVGGGAPISVQSMTNTPTADAAATLEQIRQLEEAGADIVRVSCP-DEE 90
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDK-IRVNPGNFADRRAQFEQLE 203
+ A F S + + +PLVADIHF + A+ +R+NPGN
Sbjct: 91 STAAF----STIAREARVPLVADIHFHYRRGIEAAQAGAACLRINPGNIGS--------- 137
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ + EV V+ + +G ++RIG N GSL ++ YG+ P MVESA
Sbjct: 138 ---------IERVREV----VQAARDHGCSMRIGVNAGSLEKELLEKYGEPCPDAMVESA 184
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
ARI + LDFH F S+KAS+P + V AY+ L + D PLHLGVTEAG G
Sbjct: 185 LNHARILQDLDFHEFKISVKASDPFLTVAAYQQLADAI-----DCPLHLGVTEAGPLRTG 239
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G +L G+GDTIRVSL P +EI
Sbjct: 240 TIKSAIGMGNMLWSGIGDTIRVSLAADPVEEI 271
>gi|377564290|ref|ZP_09793612.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
sputi NBRC 100414]
gi|377528472|dbj|GAB38777.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
sputi NBRC 100414]
Length = 394
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 152/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS++P+ VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 27 RRKTRQIHVGSVGVGSDYPVSVQSMTTTKTHDINATLQQIAELTASGCDIVRVACPRQED 86
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
A+A ++ K IP++ADIHF P A C +RVNPGN
Sbjct: 87 AEAL-----PIIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 130
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RIM YG +P +VES
Sbjct: 131 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRIMQKYGKATPEALVES 179
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 180 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 234
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G+LL G+GDTIRVSL+ PP +EI
Sbjct: 235 GTIKSAVAFGSLLSQGIGDTIRVSLSAPPAEEI 267
>gi|253575673|ref|ZP_04853009.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
sp. oral taxon 786 str. D14]
gi|251845011|gb|EES73023.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
sp. oral taxon 786 str. D14]
Length = 373
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 155/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V VGN+ IG + + +Q+M T T DV TV E++R+ + G LVR+TV +
Sbjct: 4 LRQDTRPVKVGNLTIGGSNEVIIQSMCTTKTADVEATVAEILRLEEAGCQLVRVTVNNEE 63
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +AL E DK+R+NPGN RR + E
Sbjct: 64 AAAAIKEIK-----KRIHIPLVADIHFNYKLALLAIENGIDKVRINPGNIG-RREKVEA- 116
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+V+ CK+ G +RIG N GSL + ++ YG +P MVES
Sbjct: 117 --------------------VVKACKERGIPIRIGVNAGSLENHLLEKYGYPTPEAMVES 156
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I LDFH+ + S+KAS+ + + AY AE+ YPLHLG+TEAG
Sbjct: 157 ALYHIGILEDLDFHDIIVSLKASDVPMAIAAYT-KAAEV----IPYPLHLGITEAGTLFS 211
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA GIG LL G+G T+R+SL+ P +E+ R L
Sbjct: 212 GTVKSAAGIGALLSMGIGSTVRISLSADPVEEVKVAREL 250
>gi|172056891|ref|YP_001813351.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Exiguobacterium sibiricum 255-15]
gi|229485803|sp|B1YLA2.1|ISPG_EXIS2 RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|171989412|gb|ACB60334.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Exiguobacterium sibiricum 255-15]
Length = 369
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 157/286 (54%), Gaps = 35/286 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KTR V VG++ IG + + +Q+MTT T DV TV E++R+ + G +VR+ +R+
Sbjct: 7 RSKTRPVRVGDLVIGGNNEVIIQSMTTTKTHDVEATVAEILRLEEAGCQIVRVACPEERD 66
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EIK+ + NIPLV DIHF +AL E DKIR+NPGN R
Sbjct: 67 ALALAEIKSRI-----NIPLVVDIHFNYKLALMAIEAGVDKIRINPGNIGRR-------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V K +RIG N GSL I+ YG + RGMVESA
Sbjct: 114 --------------EKVEAVVTAAKAKNIPIRIGVNAGSLEKHILEKYGYPTARGMVESA 159
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+I LDFH+ + S+KAS+ + ++AY+L +DYPLH+G+TE+G G
Sbjct: 160 LHHIKILEDLDFHDIIVSLKASDVQLALEAYQL-----ASESFDYPLHVGITESGPLRTG 214
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRA 367
+KSA G+G +L G+G+T+RVSL+ P +E+ + L + G+ A
Sbjct: 215 SLKSAAGLGAILSRGIGNTVRVSLSADPVEEVKVAKEVLKSFGLAA 260
>gi|304390859|ref|ZP_07372811.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|304325742|gb|EFL92988.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
Length = 396
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 150/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KTR + VG+VA+G + P+ VQ+MTT T DVA T++++ + G D++R+ +
Sbjct: 32 RHKTRKIQVGSVAVGGDAPVSVQSMTTTLTSDVAATLQQIAELTAAGCDIIRVACPSADD 91
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EI K IP+VADIHF P + E +RVNPGN +
Sbjct: 92 AAALPEI-----CKRSTIPVVADIHFQPKYVFQAIEAGCGAVRVNPGN----------IR 136
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + +G A+RIG N GSL R+ +G + + ESA
Sbjct: 137 SFDDQVRE-----------IARAATDHGTALRIGVNAGSLDKRLYEKFGGATAEALAESA 185
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + +DFH+F S+K NPV M++AYRLL HG D+PLHLGVTEAG G
Sbjct: 186 MWEASLFEDVDFHDFAISVKHHNPVTMIRAYRLLAQ----HG-DWPLHLGVTEAGPTFQG 240
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL +G+GDTIRVSL+ PP +E+
Sbjct: 241 TIKSATAFGALLSEGIGDTIRVSLSAPPVEEV 272
>gi|398864934|ref|ZP_10620462.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM78]
gi|398244326|gb|EJN29883.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM78]
Length = 369
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYRIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|420455422|ref|ZP_14954251.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-14]
gi|393072394|gb|EJB73172.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-14]
Length = 359
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKSIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ V ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVVRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGRLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|217034641|ref|ZP_03440047.1| hypothetical protein HP9810_875g7 [Helicobacter pylori 98-10]
gi|384896076|ref|YP_005770065.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 35A]
gi|420395283|ref|ZP_14894510.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY1124]
gi|420438652|ref|ZP_14937626.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-29]
gi|420485651|ref|ZP_14984269.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-4]
gi|420489096|ref|ZP_14987693.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-11]
gi|420516146|ref|ZP_15014609.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-4c]
gi|420517849|ref|ZP_15016303.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-4d]
gi|420522775|ref|ZP_15021199.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-11b]
gi|425789221|ref|YP_007017141.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Aklavik117]
gi|216942889|gb|EEC22378.1| hypothetical protein HP9810_875g7 [Helicobacter pylori 98-10]
gi|315586692|gb|ADU41073.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 35A]
gi|393013719|gb|EJB14893.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY1124]
gi|393056252|gb|EJB57164.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-29]
gi|393103786|gb|EJC04349.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-4]
gi|393107846|gb|EJC08386.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-11]
gi|393123348|gb|EJC23817.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-4d]
gi|393124445|gb|EJC24913.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-4c]
gi|393129732|gb|EJC30166.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-11b]
gi|425627536|gb|AFX91004.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Aklavik117]
Length = 359
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|385225428|ref|YP_005785353.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 83]
gi|420404333|ref|ZP_14903516.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY6261]
gi|332673574|gb|AEE70391.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori 83]
gi|393018212|gb|EJB19363.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori CPY6261]
Length = 359
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K ++PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSSLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|420492651|ref|ZP_14991225.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-15]
gi|420526672|ref|ZP_15025073.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-15b]
gi|393107090|gb|EJC07633.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-15]
gi|393131977|gb|EJC32400.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-15b]
Length = 359
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ V ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVVRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|420461993|ref|ZP_14960779.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-3]
gi|420466930|ref|ZP_14965687.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-9]
gi|393079728|gb|EJB80459.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-3]
gi|393085328|gb|EJB86016.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-9]
Length = 359
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ V ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVVRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|255326390|ref|ZP_05367474.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
mucilaginosa ATCC 25296]
gi|422325359|ref|ZP_16406395.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
mucilaginosa M508]
gi|255296607|gb|EET75940.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
mucilaginosa ATCC 25296]
gi|353343363|gb|EHB87681.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rothia
mucilaginosa M508]
Length = 386
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 153/272 (56%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR VG+V +GSE PI VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 18 RRKTRQFKVGSVGVGSESPISVQSMTTTKTHDIGATLQQIAELTAAGCDIVRVACPTDKD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K IP++ADIHF P V + +RVNPGN +
Sbjct: 78 AEAL-----PIIAKQSRIPVIADIHFQPKYVYAAIQAGCGAVRVNPGN----------IR 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL R++ YG +P +VESA
Sbjct: 123 KFDDQVKE-----------IAQMASDHGVSLRIGVNAGSLDKRLLEKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F +F S+K ++PVVMV+AYR L D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHGFRDFKISVKHNDPVVMVEAYRQLAER-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++ GTLL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSSVAFGTLLSQGIGDTIRVSLSAPPVEEV 258
>gi|420425308|ref|ZP_14924369.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-5]
gi|393041726|gb|EJB42740.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-5]
Length = 359
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D +R+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAVRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|283458512|ref|YP_003363140.1| isoprenoid biosynthesis protein [Rothia mucilaginosa DY-18]
gi|283134555|dbj|BAI65320.1| enzyme involved in the deoxyxylulose pathway of isoprenoid
biosynthesis [Rothia mucilaginosa DY-18]
Length = 400
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 161/289 (55%), Gaps = 34/289 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR VG+V +GSE PI VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 32 RRKTRQFKVGSVGVGSESPISVQSMTTTKTHDIGATLQQIAELTAAGCDIVRVACPTDKD 91
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
A+A ++ K IP++ADIHF P V + +RVNPGN +
Sbjct: 92 AEAL-----PIIAKQSRIPVIADIHFQPKYVYAAIQAGCGAVRVNPGN----------IR 136
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + +G ++RIG N GSL R++ YG +P +VESA
Sbjct: 137 KFDDQVKE-----------IAQMASDHGVSLRIGVNAGSLDKRLLEKYGKATPEALVESA 185
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F +F S+K ++PVVMV+AYR L D+PLHLGVTEAG G
Sbjct: 186 VWEASLFEEHGFRDFKISVKHNDPVVMVEAYRQLAERG-----DWPLHLGVTEAGPAFQG 240
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEID-PCRRLANLGMRAAEL 370
+KS++ GTLL G+GDTIRVSL+ PP +E+ + L +L +R +L
Sbjct: 241 TIKSSVAFGTLLSQGIGDTIRVSLSAPPVEEVKVGTKILESLNLRPRKL 289
>gi|420412199|ref|ZP_14911328.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4228]
gi|393027857|gb|EJB28945.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori NQ4228]
Length = 359
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTLEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|408681068|ref|YP_006880895.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Streptomyces venezuelae ATCC 10712]
gi|328885397|emb|CCA58636.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Streptomyces venezuelae ATCC 10712]
Length = 385
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 154/273 (56%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG+VA+G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGSVAVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA +++ K IP++ADIHF P A C +RVNPGN QF
Sbjct: 78 ADAL-----AVIAKKSQIPVIADIHFQPKYVFAAIDAGCA-AVRVNPGNIK----QF--- 124
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
DD+ ++ + + +P +RIG N GSL R++ YG +P +VES
Sbjct: 125 ---DDKVKEIAKAASDARTP-----------IRIGVNAGSLDARLLKKYGRATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFRDIKISVKHNDPVIMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +EI
Sbjct: 226 GTIKSAVAFGALLSQGIGDTIRVSLSAPPAEEI 258
>gi|154148016|ref|YP_001406557.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Campylobacter
hominis ATCC BAA-381]
gi|153804025|gb|ABS51032.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Campylobacter
hominis ATCC BAA-381]
Length = 351
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 153/277 (55%), Gaps = 32/277 (11%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R KT+ + GNVAIG + PI VQ+MT + TKD+ T+E++ R+ G D+VR V +
Sbjct: 1 MRYKTKKIFAGNVAIGGDAPISVQSMTFSKTKDIKATLEQINRLYFAGCDIVRCAVLDNK 60
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203
+A+A EIK K +P+VADIHF AL+ A+ D IR+NPGN
Sbjct: 61 DAEALEEIK-----KESPLPIVADIHFNYRHALKTAKFVDAIRLNPGNIGG--------- 106
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263
E +V CK+ +RIG N GSL ++ YG +P+GMVESA
Sbjct: 107 -------------SERIKAVVGACKERNLPIRIGVNSGSLEEKFEKKYGRTPKGMVESAL 153
Query: 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGR 323
+ K +F + + S+K+S+ + ++AY+ L + +YP HLGVTEAG
Sbjct: 154 YNIDLLEKENFTDIVVSLKSSDTIKTIKAYKALRKK-----CEYPFHLGVTEAGTEFHAT 208
Query: 324 MKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSAI +G LL G+GDTIRVS+T EKEI R +
Sbjct: 209 IKSAIALGNLLIAGIGDTIRVSITGELEKEIKVARAI 245
>gi|398841608|ref|ZP_10598819.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM102]
gi|398879594|ref|ZP_10634686.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM67]
gi|398882213|ref|ZP_10637183.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM60]
gi|398907351|ref|ZP_10653800.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM50]
gi|398107921|gb|EJL97911.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM102]
gi|398171717|gb|EJM59614.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM50]
gi|398196302|gb|EJM83315.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM67]
gi|398199462|gb|EJM86404.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM60]
Length = 369
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVAAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|403051773|ref|ZP_10906257.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acinetobacter
bereziniae LMG 1003]
gi|445414102|ref|ZP_21433827.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acinetobacter
sp. WC-743]
gi|444764921|gb|ELW89226.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acinetobacter
sp. WC-743]
Length = 371
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG+V +G + PI +Q+MT +T DV TV ++ R AD GAD++R++V
Sbjct: 8 RRPTRKIRVGSVYVGGDAPISIQSMTNTETCDVDATVAQIQRCADVGADIMRVSVPTMEA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A EI+ K +PLVADIHF +AL+VA+ D +R+NPGN
Sbjct: 68 AEAFGEIR-----KRVTVPLVADIHFDYKIALKVADMGADCLRINPGNIGS--------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E +V + + ++RIG N GSL I YG+ + + ++ESA
Sbjct: 114 -------------EAKIREVVAAARHHDISMRIGVNAGSLEKDIQKKYGEPTGQALLESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDFH F S+KASN + + AYRLL A++ D PLHLGVTEAG G
Sbjct: 161 MRHIDILDRLDFHEFKVSVKASNVFLTMDAYRLLSAQI-----DNPLHLGVTEAGVYRTG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAI +G LL +G+GDT+R+SL PE+E+
Sbjct: 216 SVKSAIALGGLLMEGIGDTMRISLAAEPEEEV 247
>gi|398853511|ref|ZP_10610110.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM80]
gi|398239346|gb|EJN25057.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM80]
Length = 369
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRVSRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|453072274|ref|ZP_21975400.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
qingshengii BKS 20-40]
gi|452757737|gb|EME16138.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
qingshengii BKS 20-40]
Length = 385
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+ PI VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 20 RRKTRQLQVGTVGVGSDFPISVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA S++ K IP++ADIHF P A C +RVNPGN
Sbjct: 80 ADAL-----SIIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 123
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 124 ----KEFDGRVKEVAKAAG-------DAGIPIRIGVNAGSLDPRLMEKYGKATPEALVES 172
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 173 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAK-----CDYPLHLGVTEAGPAFQ 227
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ P
Sbjct: 228 GTIKSAVAFGALLAEGIGDTIRVSLSAPPAEEIKVGNQILQSLNLRPRKLEIVSCP--SC 285
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG E+ R
Sbjct: 286 GRAQVDVYTLADEVSAGLEGMEIPLR 311
>gi|398858740|ref|ZP_10614427.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM79]
gi|398238467|gb|EJN24194.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM79]
Length = 369
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRESRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVAAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|304407483|ref|ZP_07389135.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Paenibacillus curdlanolyticus YK9]
gi|304343434|gb|EFM09276.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Paenibacillus curdlanolyticus YK9]
Length = 370
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 153/279 (54%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ T V VG + IG + +Q+M T T DV TV E++R+ + G +VR+TV K
Sbjct: 3 LRKDTVPVKVGPLTIGGSDEVIIQSMCTTKTADVEATVAEILRLEEAGCQIVRVTVNNKE 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
ADA EIK K +IPLVADIHF +AL E DK+R+NPGN RR + E +
Sbjct: 63 AADAIKEIK-----KRIHIPLVADIHFDYRLALAAIENGVDKVRINPGNIG-RREKVEAV 116
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
V+ CK+ G +RIG N GSL + ++ YG +P MVES
Sbjct: 117 ---------------------VKACKEKGIPIRIGVNAGSLENHLLEKYGYPTPEAMVES 155
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I +LDFH+ + S+KAS+ + + AY M YPLHLG+TEAG
Sbjct: 156 ALFHIGILEELDFHDIIVSLKASDVPMAIAAY-----SMAAEKIKYPLHLGITEAGTLHT 210
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KS+ GIG LL G+G+T+R+SL+ P +E+ R L
Sbjct: 211 GTIKSSAGIGALLAMGIGNTVRISLSADPVEEVKVAREL 249
>gi|373106061|ref|ZP_09520366.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Stomatobaculum longum]
gi|371653308|gb|EHO18708.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Stomatobaculum longum]
Length = 356
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 161/285 (56%), Gaps = 35/285 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KTR V +G+VAIG +HPIR+Q+M T+DV TV ++ + G ++VR+ V
Sbjct: 4 RHKTRVVRIGDVAIGGDHPIRIQSMCNTKTEDVEATVAQIRALTAAGCEIVRVAVPTMAA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A EI+ + IPLVADIHF +AL E DKIR+NPGN +
Sbjct: 64 AEALAEIR-----RQIKIPLVADIHFDYRLALAATEHGADKIRINPGNIGE--------- 109
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESA 262
D +E+ V K+ +R+G N GSL D + Y G + G+VESA
Sbjct: 110 ---DWKLREV----------VNAAKERNIPIRVGVNSGSLEKDLLQKYGGVTAEGIVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
E R +L + N + S+K+S+ ++ ++A+ LL E DYPLH+G+TEAG G
Sbjct: 157 LEKVRRIEELGYENLVISIKSSDVLMCIRAHELLAVET-----DYPLHIGITEAGTLLRG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMR 366
+KSA+G+G +L +G+GDTIRVSLT P +EI R L +LG+R
Sbjct: 212 TVKSAVGLGVILYEGIGDTIRVSLTGDPLEEIKAAREILKSLGLR 256
>gi|229491411|ref|ZP_04385235.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
erythropolis SK121]
gi|226185158|dbj|BAH33262.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
erythropolis PR4]
gi|229321696|gb|EEN87493.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Rhodococcus
erythropolis SK121]
Length = 391
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 170/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+ PI VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 26 RRKTRQLQVGTVGVGSDFPISVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 85
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA S++ K IP++ADIHF P A C +RVNPGN
Sbjct: 86 ADAL-----SIIAKKSQIPVIADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 129
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 130 ----KEFDGRVKEVAKAAG-------DAGIPIRIGVNAGSLDPRLMEKYGKATPEALVES 178
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 179 ALWEAGLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAK-----CDYPLHLGVTEAGPAFQ 233
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G LL +G+GDTIRVSL+ PP +EI + L +L +R +L+ +
Sbjct: 234 GTIKSAVAFGALLAEGIGDTIRVSLSAPPAEEIKVGNQILQSLNLRPRKLE--IVSCPSC 291
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + ++ EG E+ R
Sbjct: 292 GRAQVDVYTLADEVSAGLEGMEIPLR 317
>gi|385226859|ref|YP_005786783.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori SNT49]
gi|344331772|gb|AEN16802.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori SNT49]
Length = 359
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ V ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVVRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|398990009|ref|ZP_10693220.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM24]
gi|399015185|ref|ZP_10717461.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM16]
gi|424924741|ref|ZP_18348102.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas fluorescens R124]
gi|398109196|gb|EJL99135.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM16]
gi|398145661|gb|EJM34439.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM24]
gi|404305901|gb|EJZ59863.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas fluorescens R124]
Length = 369
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRVSRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A +IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGKIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|312793077|ref|YP_004026000.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180217|gb|ADQ40387.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 348
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 164/289 (56%), Gaps = 38/289 (13%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
T+ + +GN IG PIR+Q+MT TKD+ TVE+++R+ G D++R+ V A A
Sbjct: 5 TKKIKIGNFYIGGGEPIRIQSMTNTKTKDIEATVEQILRLESLGCDIIRVAVPDLDSAKA 64
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALR-VAECFDKIRVNPGNFADRRAQFEQLEYTD 206
+IK+ + +IPLVADIHF +AL + DKIR+NPGN D R E
Sbjct: 65 ISKIKSRI-----HIPLVADIHFDHKLALEAIYNGADKIRINPGNIGDERKVQE------ 113
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESAFEF 265
+ ++ K+YG A+R+G N GSL D + Y P +VE+A
Sbjct: 114 ----------------IAKEAKRYGIAIRVGANSGSLPKDILQKYKSPVPDAIVEAAIYQ 157
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+ + +F N + S+K+S+ + +++Y +L ++ YPLH+G+TEAG G +K
Sbjct: 158 VRLLERFEFDNIVVSVKSSDVLTTIKSYEILSQKL-----SYPLHVGLTEAGTFVAGTVK 212
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLANLGMRAAELQQGV 374
S+I IG LL G+GDTIRVSLT+ PEKE+ + + +++ +L++GV
Sbjct: 213 SSIAIGYLLLRGIGDTIRVSLTDSPEKEVIVAKEI----LKSLKLRKGV 257
>gi|420864573|ref|ZP_15327962.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
abscessus 4S-0303]
gi|420869363|ref|ZP_15332745.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
abscessus 4S-0726-RA]
gi|421040268|ref|ZP_15503276.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
abscessus 4S-0116-R]
gi|392063289|gb|EIT89138.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
abscessus 4S-0303]
gi|392068833|gb|EIT94680.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
abscessus 4S-0726-RA]
gi|392221196|gb|EIV46719.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
abscessus 4S-0116-R]
Length = 395
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 149/273 (54%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR+TR +MVGNV +GS+ P+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 21 RRQTRQLMVGNVGVGSDSPVSVQSMCTTKTHDVNSTLQQIAELTASGCDIVRVACPRQED 80
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI + IP++ADIHF P A C +RVNPGN
Sbjct: 81 ADALAEIA-----RKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 124
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL RI+ YG +P +VES
Sbjct: 125 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRILGKYGKATPEALVES 173
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV AY LL A+ DYPLHLGVTEAG
Sbjct: 174 ALWEAGLFEEHGFGDIKISVKHNDPVIMVAAYELLAAQ-----CDYPLHLGVTEAGPAFQ 228
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 229 GTIKSAVAFGALLSKGIGDTIRVSLSAPPAEEV 261
>gi|163815214|ref|ZP_02206591.1| hypothetical protein COPEUT_01374 [Coprococcus eutactus ATCC 27759]
gi|158449409|gb|EDP26404.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Coprococcus
eutactus ATCC 27759]
Length = 352
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 162/288 (56%), Gaps = 35/288 (12%)
Query: 87 KTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREAD 146
KTR + +G+ IG +PI +Q+MT T DV TV +++R+ G D++R T+ + AD
Sbjct: 2 KTREIHIGDRVIGGGNPILIQSMTNTKTSDVEATVAQILRLEKAGCDIIRCTINDEAAAD 61
Query: 147 ACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLEYT 205
A EIK K +IPLV DIHF +A++ E DKIR+NPGN ++
Sbjct: 62 AVPEIK-----KRIHIPLVGDIHFDYRLAIKAIENGVDKIRINPGNIGGQQK-------- 108
Query: 206 DDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESAFE 264
+ +VE KK +R+G N GSL D + Y G + G+VESA +
Sbjct: 109 --------------LAKVVEAAKKRNIPIRVGVNSGSLEKDLVEKYGGVTAEGIVESALD 154
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
R+ LD+HN + S+K+S+ ++ V+A+ L+ + DYPLH+G+TE+G G +
Sbjct: 155 KVRMIEDLDYHNIVISIKSSDVMMCVKAHELIADKT-----DYPLHVGITESGTVTRGNI 209
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
KS++G+G +L +G+GDTIRVSLT P EI + L LG+R ++
Sbjct: 210 KSSVGLGIILHEGIGDTIRVSLTGDPVDEILSAKLILKALGLRKGGVE 257
>gi|409358280|ref|ZP_11236643.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dietzia
alimentaria 72]
Length = 394
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 152/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HPI VQ+MTT T D+ T++++ + G D+VR+ + +
Sbjct: 24 RRKTRQLFVGQVGVGSDHPISVQSMTTTKTHDINSTLQQIAELTASGCDIVRVACPRQED 83
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + + IP++ADIHF P A C +RVNPGN
Sbjct: 84 ADAL-----ATIARKSPIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 127
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+++ YG +P +VES
Sbjct: 128 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRLLAKYGKATPEALVES 176
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 177 AVWEASLFEEYGFGDIKISVKHNDPVIMVEAYRQLAAKT-----DYPLHLGVTEAGPAFQ 231
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL +G+GDTIRVSL+ PP +EI
Sbjct: 232 GTIKSAVAFGALLSEGIGDTIRVSLSAPPVEEI 264
>gi|384082126|ref|ZP_09993301.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [gamma
proteobacterium HIMB30]
Length = 374
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 152/272 (55%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VG+V IG + PI VQ+MT +T DV TV ++ I D GADLVR++V
Sbjct: 8 RRHSRQIRVGSVPIGGDAPIAVQSMTNTETCDVQATVRQIEAIVDAGADLVRVSVPTMDA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA +I++ + ++PLVADIHF +AL+V E D +R+NPGN
Sbjct: 68 ADAFGQIRSKV-----SVPLVADIHFDHKIALKVIELGVDCLRINPGNIGR--------- 113
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V C+ +G +RIG N GSL + YG+ +P +VESA
Sbjct: 114 -------------EDRVRAVVSSCRDHGVPIRIGVNAGSLEKDLQKKYGEPTPDALVESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDF F S+KAS + V AYR + ++ D PLHLG+TEAG G
Sbjct: 161 MRHIEILDRLDFQEFKVSLKASEIFMTVAAYRKIADQI-----DQPLHLGITEAGGLRSG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G+G LL DG+GDT+R+SL P +E+
Sbjct: 216 TVKSAAGLGMLLMDGIGDTLRISLAADPVEEV 247
>gi|166032730|ref|ZP_02235559.1| hypothetical protein DORFOR_02445 [Dorea formicigenerans ATCC
27755]
gi|346306725|ref|ZP_08848879.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dorea
formicigenerans 4_6_53AFAA]
gi|166027087|gb|EDR45844.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dorea
formicigenerans ATCC 27755]
gi|345908083|gb|EGX77751.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Dorea
formicigenerans 4_6_53AFAA]
Length = 351
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 164/290 (56%), Gaps = 35/290 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R T+ V +GNV IG +PIR+Q+MT T+DV TV +++ + G +++R V
Sbjct: 3 RDHTKEVQIGNVTIGGGNPIRIQSMTNTKTEDVEATVAQILALEKAGCEIIRCAVPNMDA 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A A EIK K +IPLVADIHF +A+ E DKIR+NPGN D
Sbjct: 63 AKAIGEIK-----KQIHIPLVADIHFDYKLAIAAIENGADKIRINPGNIGD--------- 108
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM-SYYGDSPRGMVESA 262
E+ +VEK K+YG +R+G N GSL ++ Y+G + G+VESA
Sbjct: 109 -------------EQRVRAVVEKAKEYGVPIRVGVNSGSLEKHLVEKYHGVTAEGLVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ ++ ++ ++N + S+K+S+ ++ V+A+ L+ + YPLH+G+TEAG G
Sbjct: 156 LDKIQLIEEMGYNNLVVSIKSSDVMMCVKAHELIAKK-----CPYPLHVGITEAGTLLAG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCR-RLANLGMRAAELQ 371
+KS++G+G +L G+GDTIRVSLT P +EI + L LG+R ++
Sbjct: 211 NIKSSVGLGLILGQGIGDTIRVSLTGSPLEEIKTAKIILKTLGLRTGGIE 260
>gi|31794045|ref|NP_856538.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis AF2122/97]
gi|50400946|sp|Q7TXN6.1|ISPG_MYCBO RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|31619640|emb|CAD96580.1| PROBABLE GCPE PROTEIN [Mycobacterium bovis AF2122/97]
Length = 387
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 147/273 (53%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR +MVGNV +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 18 RRATRQLMVGNVGVGSDHPVSVQSMCTTKTHDVNSTLQQIAELTAAGCDIVRVACPRQED 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP+VADIHF P A C +RVNPGN
Sbjct: 78 ADALAEIA-----RHSQIPVVADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 121
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ + + + G +RIG N GSL R M YG +P +VES
Sbjct: 122 ----KEFDGRVGEV-------AKAAGAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AY LL A DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFGDIKISVKHNDPVVMVAAYELLAAR-----CDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSRGIGDTIRVSLSAPPVEEV 258
>gi|297584615|ref|YP_003700395.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
selenitireducens MLS10]
gi|297143072|gb|ADH99829.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
selenitireducens MLS10]
Length = 366
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 154/280 (55%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R+ TR V VG + IG + +Q+MT + T DV V E++R+ + G +VR+
Sbjct: 5 THRKHTRPVKVGPLQIGGNDEVVIQSMTMSKTHDVDAVVAEILRLEEAGCQIVRVACPEM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
++A+A EIK K NIPLVADIHF +AL+ E DKIR+NPGN R
Sbjct: 65 KDAEAIPEIK-----KRINIPLVADIHFDYKLALKAIEGGIDKIRINPGNIGRR------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V K+ G +RIG N GSL +I+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVNAAKEKGIPIRIGVNAGSLEKKILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I +LDFH+ + SMKAS+ + V+AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEELDFHDIIVSMKASDVHLAVEAY-----EKAAKAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KS+ G+G LL G+G+T+R+SL+ P +E+ + L
Sbjct: 213 TGTIKSSAGLGILLNQGIGNTVRISLSADPVEEVKVAKEL 252
>gi|420427258|ref|ZP_14926303.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-9]
gi|420501414|ref|ZP_14999958.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-30]
gi|421719703|ref|ZP_16158987.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R046Wa]
gi|393042191|gb|EJB43202.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp A-9]
gi|393150220|gb|EJC50528.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp P-30]
gi|407221026|gb|EKE90831.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori R046Wa]
Length = 359
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|337750710|ref|YP_004644872.1| protein IspG [Paenibacillus mucilaginosus KNP414]
gi|379723758|ref|YP_005315889.1| protein IspG [Paenibacillus mucilaginosus 3016]
gi|386726510|ref|YP_006192836.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
mucilaginosus K02]
gi|336301899|gb|AEI45002.1| IspG [Paenibacillus mucilaginosus KNP414]
gi|378572430|gb|AFC32740.1| IspG [Paenibacillus mucilaginosus 3016]
gi|384093635|gb|AFH65071.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
mucilaginosus K02]
Length = 369
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 151/278 (54%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +T V VGN+ IG + + +Q+M T T DV TV E+ R+ + G +VR+TV K
Sbjct: 4 RTETVPVRVGNLTIGGSNDVIIQSMCTTKTADVKATVAEIHRLEEAGCQIVRVTVNNKEA 63
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A EIK K +IPLVADIHF +AL E DK+R+NPGN R
Sbjct: 64 AEAIKEIK-----KQISIPLVADIHFDHRLALMAIENGIDKVRINPGNIGRR-------- 110
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V+ CK+ G +RIG N GSL + ++ YG +P MVESA
Sbjct: 111 --------------EKVEAVVKACKERGIPIRIGVNAGSLENHLLEKYGYPTPEAMVESA 156
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDF + + S+KAS+ + + AY + + YPLHLG+TEAG G
Sbjct: 157 LYHIGILEELDFRDIIVSLKASDVPMAIAAYTKAAS-----AFKYPLHLGITEAGTLFSG 211
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KSA G+G LL G+G TIR+SL+ P +E+ CR L
Sbjct: 212 TVKSAAGLGALLSMGIGSTIRISLSADPVEEVKVCREL 249
>gi|317128350|ref|YP_004094632.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cellulosilyticus DSM 2522]
gi|315473298|gb|ADU29901.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Bacillus
cellulosilyticus DSM 2522]
Length = 367
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 150/280 (53%), Gaps = 34/280 (12%)
Query: 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK 142
T R+ TR V VG + IG + +Q+MT + T DV TV E+ R+ + G +VR+
Sbjct: 5 THRKNTRPVKVGPITIGGNDEVIIQSMTMSKTHDVDATVAEIKRLEEAGCQVVRVACPDM 64
Query: 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQ 201
R A+A EIK K NIPLV DIHF +AL+ E DKIR+NPGN +
Sbjct: 65 RAAEAIPEIK-----KRINIPLVVDIHFDYKLALKAIEGGADKIRINPGNIGRK------ 113
Query: 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVE 260
E +V K G +RIG N GSL RI+ YG + GMVE
Sbjct: 114 ----------------EKVEAVVNAAKAKGIPIRIGVNAGSLEKRILDKYGYPTADGMVE 157
Query: 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320
SA +I LDFH+ + SMKAS+ + V+AY E +DYPLHLG+TE+G
Sbjct: 158 SALHHIKILEDLDFHDIIVSMKASDVRLAVEAY-----EKAAQAFDYPLHLGITESGTLF 212
Query: 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G LL G+G+T+R+SL+ P +E+ + L
Sbjct: 213 SGTVKSAAGLGILLNKGIGNTVRISLSADPVEEVKVAKEL 252
>gi|294631726|ref|ZP_06710286.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. e14]
gi|292835059|gb|EFF93408.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Streptomyces
sp. e14]
Length = 385
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 151/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK+R + VG V +G + P+ VQ+MTT T D+ T++++ + G +VR+ + +
Sbjct: 18 RRKSRQIQVGTVPVGGDAPVSVQSMTTTRTSDIGATLQQIAELTASGCQIVRVACPTQDD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
ADA + + + IP++ADIHF P E +RVNPGN ++
Sbjct: 78 ADAL-----ATIARKSQIPVIADIHFQPKYVFAAIEAGCAAVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
DD+ ++ + + K +G +RIG N GSL R++ YG +P +VESA
Sbjct: 123 KFDDQVRE-----------IAKAAKDHGTPIRIGVNAGSLDRRLLQKYGKATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DF + S+K ++PVVM++AYR L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFEEHDFRDIKISVKHNDPVVMIEAYRQLAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 227 TIKSAVAFGALLSQGIGDTIRVSLSAPPAEEV 258
>gi|118602409|ref|YP_903624.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
gi|166217127|sp|A1AW46.1|ISPG_RUTMC RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|118567348|gb|ABL02153.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
Length = 358
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRK++ V VG+VAIG + PI VQ+MT +T DV TV ++ I + GADLVR++V
Sbjct: 9 RRKSKQVFVGDVAIGGDAPISVQSMTNTETTDVKATVAQIQAIQNAGADLVRVSVPTIDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A F+I ++K NIPL++DIHF +AL+VAE D +R+NPGN
Sbjct: 69 AEA-FKI----IKKQVNIPLISDIHFDYKIALKVAEYGADCLRINPGNIGRE-------- 115
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
I EV + ++ + +RIG N GSL + Y + +P MVESA
Sbjct: 116 ----------DRIREVVAAAID----HNIPIRIGVNAGSLEKDLQKKYTEPTPEAMVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
F I KL+F NF S+KAS + V AY+ L +++ D PLHLG+TEAG G
Sbjct: 162 FRQIDILDKLNFDNFKISLKASEIFMTVFAYQQLASQI-----DNPLHLGITEAGSLRFG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL +G+GDTIR+SL P E+
Sbjct: 217 TIKSSIGLGLLLSEGIGDTIRISLASDPVDEV 248
>gi|420446974|ref|ZP_14945868.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-43]
gi|393063947|gb|EJB64787.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Hp H-43]
Length = 359
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|385220553|ref|YP_005782025.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori India7]
gi|317009360|gb|ADU79940.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori India7]
Length = 359
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 151/276 (54%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVGACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF NF S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTNFKISLKASDVMRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|167969497|ref|ZP_02551774.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
gi|294994039|ref|ZP_06799730.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis 210]
gi|313659816|ref|ZP_07816696.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis KZN V2475]
gi|379029191|dbj|BAL66924.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Mycobacterium
tuberculosis str. Erdman = ATCC 35801]
Length = 381
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 147/273 (53%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR +MVGNV +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 12 RRATRQLMVGNVGVGSDHPVSVQSMCTTKTHDVNSTLQQIAELTAAGCDIVRVACPRQED 71
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP+VADIHF P A C +RVNPGN
Sbjct: 72 ADALAEIA-----RHSQIPVVADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ + + + G +RIG N GSL R M YG +P +VES
Sbjct: 116 ----KEFDGRVGEV-------AKAAGAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVES 164
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AY LL A DYPLHLGVTEAG
Sbjct: 165 ALWEASLFEEHGFGDIKISVKHNDPVVMVAAYELLAAR-----CDYPLHLGVTEAGPAFQ 219
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 220 GTIKSAVAFGALLSRGIGDTIRVSLSAPPVEEV 252
>gi|385228356|ref|YP_005788289.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Puno120]
gi|344334794|gb|AEN15238.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Puno120]
Length = 359
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|453364574|dbj|GAC79851.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
malaquae NBRC 108250]
Length = 384
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 171/326 (52%), Gaps = 38/326 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+H I VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 20 RRKTRQIQVGSVGVGSDHQISVQSMCTTKTHDVNATLQQIAELTASGCDIVRVACPRQED 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA + + K IP++ADIHF P A C +RVNPGN
Sbjct: 80 ADAL-----ATIAKKSKIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 123
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R++ YG +P +VES
Sbjct: 124 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDPRLLKKYGKATPEALVES 172
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PV+MV+AYR L A+ DYPLHLGVTEAG
Sbjct: 173 ALWEASLFEEHGFGDIKISVKHNDPVIMVEAYRQLAAQS-----DYPLHLGVTEAGPAFQ 227
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAPFEEK 380
G +KSA+ G+LL +G+GDTIRVSL+ PP +EI L +L +R +L+ +
Sbjct: 228 GTIKSAVAFGSLLSEGIGDTIRVSLSAPPAEEIKVGDAILQSLNLRPRKLE--IVSCPSC 285
Query: 381 HRHYFDFQRRSGQLPIQKEGEEVDYR 406
R D + + ++ EG EV R
Sbjct: 286 GRAQVDVYKLANEVSAGLEGLEVPLR 311
>gi|352106570|ref|ZP_08961513.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Halomonas sp.
HAL1]
gi|350597613|gb|EHA13741.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Halomonas sp.
HAL1]
Length = 371
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 151/272 (55%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNVA+G + PI VQ+MT +T DVA TV ++ ++ GAD+VR++V
Sbjct: 9 RRHSRQIQVGNVAVGGDAPIAVQSMTNTNTLDVAATVAQIQQLEKAGADIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+ +IK K N+PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AETFGQIK-----KLVNVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVSAARDNGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+LDF F S+KAS+ + V AYR L + + PLHLG+TEAG G
Sbjct: 162 MRHIDYLDRLDFQEFKVSVKASDVFMAVAAYRDLAVRI-----EQPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDTIRVSL P +EI
Sbjct: 217 TVKSSIGLGMLLMDGIGDTIRVSLAADPVEEI 248
>gi|402815456|ref|ZP_10865048.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG
[Paenibacillus alvei DSM 29]
gi|402506496|gb|EJW17019.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG
[Paenibacillus alvei DSM 29]
Length = 365
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 157/279 (56%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R +TR V VGNV IG + + +Q+M T T DV TV E+ R+ + G +VR+TV +
Sbjct: 3 LRHQTRAVKVGNVTIGGNNEVVIQSMCTTKTADVEATVAEIHRLEEAGCQIVRVTVNNED 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A+A EIK K +IPLVADIHF +AL+ E DK+R+NPGN RR + E
Sbjct: 63 AANAIKEIK-----KRISIPLVADIHFDYRLALKAIENGIDKVRINPGNIG-RREKVEA- 115
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
+V+ CK+ G +RIG N GSL + ++ YG +P MVES
Sbjct: 116 --------------------VVKACKERGIPIRIGVNAGSLENHLLEKYGYPTPEAMVES 155
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I +LDFH+ + S+KAS+ + + AY AE+ YPLHLG+TEAG
Sbjct: 156 ALFHIGILEELDFHDIIVSLKASDVPMAIAAYT-KAAEV----IPYPLHLGITEAGTLFS 210
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KS+ G+G LL G+G T+RVSL+ P +E+ R L
Sbjct: 211 GTIKSSAGLGALLSLGIGSTVRVSLSADPVEEVKVAREL 249
>gi|15610005|ref|NP_217384.1| Probable GcpE protein [Mycobacterium tuberculosis H37Rv]
gi|15842410|ref|NP_337447.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CDC1551]
gi|121638750|ref|YP_978974.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148662711|ref|YP_001284234.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
gi|148824059|ref|YP_001288813.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis F11]
gi|224991242|ref|YP_002645931.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253798043|ref|YP_003031044.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis KZN 1435]
gi|254232963|ref|ZP_04926290.1| gcpE protein [Mycobacterium tuberculosis C]
gi|254365510|ref|ZP_04981555.1| gcpE protein [Mycobacterium tuberculosis str. Haarlem]
gi|254551937|ref|ZP_05142384.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|289444423|ref|ZP_06434167.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis T46]
gi|289448534|ref|ZP_06438278.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis CPHL_A]
gi|289571058|ref|ZP_06451285.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis T17]
gi|289575573|ref|ZP_06455800.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis K85]
gi|289746668|ref|ZP_06506046.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis 02_1987]
gi|289751534|ref|ZP_06510912.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis T92]
gi|289754981|ref|ZP_06514359.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis EAS054]
gi|289758989|ref|ZP_06518367.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis T85]
gi|289763046|ref|ZP_06522424.1| gcpE protein [Mycobacterium tuberculosis GM 1503]
gi|297635484|ref|ZP_06953264.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis KZN 4207]
gi|297732483|ref|ZP_06961601.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis KZN R506]
gi|298526338|ref|ZP_07013747.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
gi|306789740|ref|ZP_07428062.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu004]
gi|307085577|ref|ZP_07494690.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu012]
gi|308232270|ref|ZP_07415492.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu001]
gi|308369887|ref|ZP_07419398.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu002]
gi|308371162|ref|ZP_07424022.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu003]
gi|308373562|ref|ZP_07432856.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu005]
gi|308374718|ref|ZP_07437097.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu006]
gi|308375911|ref|ZP_07445503.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu007]
gi|308377157|ref|ZP_07441310.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu008]
gi|308378126|ref|ZP_07481596.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu009]
gi|308379348|ref|ZP_07485933.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu010]
gi|308380501|ref|ZP_07490150.2| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu011]
gi|339632877|ref|YP_004724519.1| GCPE protein [Mycobacterium africanum GM041182]
gi|375295311|ref|YP_005099578.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis KZN 4207]
gi|378772605|ref|YP_005172338.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis BCG str. Mexico]
gi|383308619|ref|YP_005361430.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis RGTB327]
gi|385992131|ref|YP_005910429.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CCDC5180]
gi|385995754|ref|YP_005914052.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CCDC5079]
gi|385999653|ref|YP_005917952.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CTRI-2]
gi|392387494|ref|YP_005309123.1| gcpE [Mycobacterium tuberculosis UT205]
gi|392431519|ref|YP_006472563.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis KZN 605]
gi|397674786|ref|YP_006516321.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis H37Rv]
gi|422813924|ref|ZP_16862293.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis CDC1551A]
gi|424805208|ref|ZP_18230639.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis W-148]
gi|424948509|ref|ZP_18364205.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Mycobacterium
tuberculosis NCGM2209]
gi|449064945|ref|YP_007432028.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis BCG str. Korea 1168P]
gi|8928131|sp|O33350.1|ISPG_MYCTU RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|166217114|sp|A1KML3.1|ISPG_MYCBP RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|166217115|sp|A5U6M2.1|ISPG_MYCTA RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|254806882|sp|C1AFY4.1|ISPG_MYCBT RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|13882711|gb|AAK47261.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis CDC1551]
gi|121494398|emb|CAL72879.1| Probable gcpE protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124602022|gb|EAY61032.1| gcpE protein [Mycobacterium tuberculosis C]
gi|134151023|gb|EBA43068.1| gcpE protein [Mycobacterium tuberculosis str. Haarlem]
gi|148506863|gb|ABQ74672.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis H37Ra]
gi|148722586|gb|ABR07211.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis F11]
gi|224774357|dbj|BAH27163.1| 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Mycobacterium
bovis BCG str. Tokyo 172]
gi|253319546|gb|ACT24149.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis KZN 1435]
gi|289417342|gb|EFD14582.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis T46]
gi|289421492|gb|EFD18693.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis CPHL_A]
gi|289540004|gb|EFD44582.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis K85]
gi|289544812|gb|EFD48460.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis T17]
gi|289687196|gb|EFD54684.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis 02_1987]
gi|289692121|gb|EFD59550.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis T92]
gi|289695568|gb|EFD62997.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis EAS054]
gi|289710552|gb|EFD74568.1| gcpE protein [Mycobacterium tuberculosis GM 1503]
gi|289714553|gb|EFD78565.1| aminoglycoside acetyltransferase negative regulator [Mycobacterium
tuberculosis T85]
gi|298496132|gb|EFI31426.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis 94_M4241A]
gi|308214441|gb|EFO73840.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu001]
gi|308326111|gb|EFP14962.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu002]
gi|308329615|gb|EFP18466.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu003]
gi|308333754|gb|EFP22605.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu004]
gi|308337148|gb|EFP25999.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu005]
gi|308340958|gb|EFP29809.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu006]
gi|308344791|gb|EFP33642.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu007]
gi|308348739|gb|EFP37590.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu008]
gi|308353509|gb|EFP42360.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu009]
gi|308357305|gb|EFP46156.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu010]
gi|308361191|gb|EFP50042.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu011]
gi|308364884|gb|EFP53735.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis SUMu012]
gi|323718478|gb|EGB27649.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis CDC1551A]
gi|326904484|gb|EGE51417.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis W-148]
gi|328457816|gb|AEB03239.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis KZN 4207]
gi|339295708|gb|AEJ47819.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CCDC5079]
gi|339299324|gb|AEJ51434.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CCDC5180]
gi|339332233|emb|CCC27943.1| putative GCPE protein [Mycobacterium africanum GM041182]
gi|341602788|emb|CCC65466.1| probable gcpE protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|344220700|gb|AEN01331.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis CTRI-2]
gi|356594926|gb|AET20155.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis BCG str. Mexico]
gi|358233024|dbj|GAA46516.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase [Mycobacterium
tuberculosis NCGM2209]
gi|378546045|emb|CCE38324.1| gcpE [Mycobacterium tuberculosis UT205]
gi|380722572|gb|AFE17681.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis RGTB327]
gi|392052928|gb|AFM48486.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gcpE
[Mycobacterium tuberculosis KZN 605]
gi|395139691|gb|AFN50850.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
tuberculosis H37Rv]
gi|440582346|emb|CCG12749.1| putative GCPE protein [Mycobacterium tuberculosis 7199-99]
gi|444896409|emb|CCP45670.1| Probable GcpE protein [Mycobacterium tuberculosis H37Rv]
gi|449033453|gb|AGE68880.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Mycobacterium
bovis BCG str. Korea 1168P]
Length = 387
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 147/273 (53%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR +MVGNV +GS+HP+ VQ+M T T DV T++++ + G D+VR+ + +
Sbjct: 18 RRATRQLMVGNVGVGSDHPVSVQSMCTTKTHDVNSTLQQIAELTAAGCDIVRVACPRQED 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA EI ++ IP+VADIHF P A C +RVNPGN
Sbjct: 78 ADALAEIA-----RHSQIPVVADIHFQPRYIFAAIDAGCA-AVRVNPGNI---------- 121
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ + + + G +RIG N GSL R M YG +P +VES
Sbjct: 122 ----KEFDGRVGEV-------AKAAGAAGIPIRIGVNAGSLDKRFMEKYGKATPEALVES 170
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV AY LL A DYPLHLGVTEAG
Sbjct: 171 ALWEASLFEEHGFGDIKISVKHNDPVVMVAAYELLAAR-----CDYPLHLGVTEAGPAFQ 225
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL G+GDTIRVSL+ PP +E+
Sbjct: 226 GTIKSAVAFGALLSRGIGDTIRVSLSAPPVEEV 258
>gi|333908811|ref|YP_004482397.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinomonas
posidonica IVIA-Po-181]
gi|333478817|gb|AEF55478.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Marinomonas
posidonica IVIA-Po-181]
Length = 370
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 158/272 (58%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R +MVG+V +G PI VQ+MT +T DV TV ++ IAD GAD+VR+++
Sbjct: 9 RRQSRQIMVGDVPVGGGAPISVQSMTNTETCDVDATVAQIRAIADAGADIVRVSIPSMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ + +IPLVADIHF +AL+VAE D +R+NPGN ++
Sbjct: 69 AEAFKRIREEV-----SIPLVADIHFDYKIALKVAEYGVDCLRINPGNIGNK-------- 115
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ +V+ + +RIG N GSL + YG+ +P +VESA
Sbjct: 116 --------------DRVRAVVDCARDKNIPIRIGVNAGSLEKDLQKKYGEPTPDALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
F + +LDFH + S+KAS+ + V+AYR + +++ D PLHLG+TEAG G
Sbjct: 162 FRQIQYFDELDFHEYKLSLKASDIFMTVEAYRKIASQI-----DNPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS+IG+G LL DG+GDT+RVSL P +EI
Sbjct: 217 TVKSSIGLGLLLMDGIGDTLRVSLAADPVQEI 248
>gi|378548684|ref|ZP_09823900.1| hypothetical protein CCH26_01307 [Citricoccus sp. CH26A]
Length = 394
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 150/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HP+ VQ+MTT T D+ T++++ + G D+VR+ ++
Sbjct: 18 RRKTRQISVGRVGVGSDHPVSVQSMTTTKTHDIGATLQQIAELTAAGCDIVRVACPTDKD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A ++ + IP++ADIHF P E +RVNPGN ++
Sbjct: 78 AAAL-----KVIAQQSTIPVIADIHFQPKYVFAAIEAGCGAVRVNPGN----------IK 122
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
DD+ ++ Q E G ++RIG N GSL R++ YG +P +VESA
Sbjct: 123 RFDDQVKEIAQAASEA-----------GTSIRIGVNAGSLDKRLLEKYGRATPEALVESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + F +F S+K ++PVVM +AY LL A D+PLHLGVTEAG G
Sbjct: 172 VWEASLFEEHGFRDFKISVKHNDPVVMARAYELLAAR-----GDWPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA G LL G+GDTIRVSL+ PP +EI
Sbjct: 227 TIKSATAFGYLLGQGIGDTIRVSLSAPPVEEI 258
>gi|354613703|ref|ZP_09031611.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharomonospora paurometabolica YIM 90007]
gi|353221942|gb|EHB86272.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Saccharomonospora paurometabolica YIM 90007]
Length = 383
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 150/272 (55%), Gaps = 33/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG V +GS+HP+ VQ+MTT +T DV T++++ + G D+VR+ +
Sbjct: 18 RRKTRQLQVGPVGVGSDHPVSVQSMTTTETADVNATLQQIAELTASGCDIVRVACPSADD 77
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A I IP++ADIHF P E +RVNPGN
Sbjct: 78 AEALPAIA-----AKSKIPVIADIHFQPKYVFAAIEAGCAGVRVNPGN------------ 120
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
++ ++ + + +G +RIG N GSL R+M+ +G +P + ESA
Sbjct: 121 ---------IKKFDDKVAEIARAAGDHGVPIRIGVNAGSLDPRLMAKHGKATPEALAESA 171
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+ S+K ++PVVMV+AY +L + DYPLHLGVTEAG G
Sbjct: 172 LWEASLFAEHDFHDLKISVKHNDPVVMVRAYEILAEQ-----CDYPLHLGVTEAGPAFQG 226
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KS++ G LL+ G+GDTIRVSL+ PP +E+
Sbjct: 227 TVKSSVAFGALLRQGIGDTIRVSLSAPPVEEV 258
>gi|384889259|ref|YP_005763561.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori v225d]
gi|297379825|gb|ADI34712.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori v225d]
Length = 359
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + +QAYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVMRTMQAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|197301359|ref|ZP_03166440.1| hypothetical protein RUMLAC_00086 [Ruminococcus lactaris ATCC
29176]
gi|197299516|gb|EDY34035.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Ruminococcus
lactaris ATCC 29176]
Length = 355
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 169/300 (56%), Gaps = 35/300 (11%)
Query: 80 IHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV 139
+ K R +T+ + +G+V IG HP+ +Q+MT T+DV GTVE++ R+ G +++R TV
Sbjct: 1 MKKLYRNQTKEIRIGDVVIGGNHPVAIQSMTNTRTEDVKGTVEQIHRLEKAGCEIIRCTV 60
Query: 140 QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQ 198
+ A+A EIK K +IPLVADIHF +A+ E DKIR+NPGN +
Sbjct: 61 PTREAAEALKEIK-----KQIHIPLVADIHFDYRLAIAAIENGADKIRINPGNIGTK--- 112
Query: 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRG 257
E +V+K K+YG +R+G N GSL ++ YG + G
Sbjct: 113 -------------------ERVQAVVDKAKEYGVPIRVGVNSGSLEKPLIEKYGGVTAEG 153
Query: 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAG 317
+VESA + + ++ + N + S+K+S+ ++ V+A+ L+ + YPLH+G+TE+G
Sbjct: 154 IVESALDKVHMIEEMGYDNLVVSIKSSDVLMCVKAHELIAEQ-----CPYPLHVGITESG 208
Query: 318 EGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQQGVAP 376
G +KS++G+G +L +G+G+TIRVSLT P +EI + L LG+R ++ P
Sbjct: 209 TVYSGNVKSSVGLGIILYEGIGNTIRVSLTGDPVEEIRTAKLILKTLGLRKGGIEVVSCP 268
>gi|184201258|ref|YP_001855465.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Kocuria
rhizophila DC2201]
gi|238055490|sp|B2GKS3.1|ISPG_KOCRD RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|183581488|dbj|BAG29959.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Kocuria
rhizophila DC2201]
Length = 388
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 159/290 (54%), Gaps = 34/290 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+MTT T ++ T++++ + G D+VR+ + +
Sbjct: 19 RRKTRQIRVGSVGVGSDSPISVQSMTTTPTTNINATLQQIAELNAAGCDIVRVACPSQDD 78
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPS-VALRVAECFDKIRVNPGNFADRRAQFEQLE 203
ADA ++ K IP++ADIHF P V + +RVNPGN Q E +
Sbjct: 79 ADAL-----PIIAKKSPIPVIADIHFQPKYVYAAIDAGCAGVRVNPGNIRKFDDQIEGIS 133
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
+ G ++RIG N GSL R++ YG +P ++ESA
Sbjct: 134 ---------------------RAAEAAGVSIRIGVNAGSLDKRLLEKYGKATPEALMESA 172
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
A + + DFH+F S+K ++PV MV+AY+LL D+PLHLGVTEAG G
Sbjct: 173 VWEASLFEQHDFHDFKISVKHNDPVTMVRAYQLLAER-----GDWPLHLGVTEAGPALQG 227
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA G LL G+GDTIRVSL+ PP +E+ + L +LG+R +L+
Sbjct: 228 TVKSATAFGILLSQGIGDTIRVSLSAPPVEEVKVGNQILQSLGLRPRKLE 277
>gi|406037304|ref|ZP_11044668.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Acinetobacter
parvus DSM 16617 = CIP 108168]
Length = 371
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR TR + VG+V +G + PI VQ+MT +T DV TV ++ R AD GAD++R++V
Sbjct: 8 RRPTRKIRVGSVYVGGDAPISVQSMTNTETCDVDATVAQIQRCADAGADIMRVSVPSMEA 67
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A I+ K ++PLVADIHF +AL VA+ D +R+NPGN
Sbjct: 68 AEAFGAIR-----KRVSVPLVADIHFDHRIALAVADYGADCLRINPGNIGSD-------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
Q + EV V K +G ++RIG N GSL + YG+ + + ++ESA
Sbjct: 115 ----------QKVREV----VAAAKHHGISIRIGVNAGSLEKDLQVKYGEPTGQALLESA 160
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDFH F S+KASN + + AYRLL ++ D PLHLGVTEAG G
Sbjct: 161 MRHIDILDRLDFHEFKVSVKASNVFLTMDAYRLLSQQI-----DNPLHLGVTEAGIYRTG 215
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAI +G LL +G+GDT+R+SL PE EI
Sbjct: 216 TVKSAIALGGLLMEGIGDTMRISLAAEPEDEI 247
>gi|386752617|ref|YP_006225836.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Shi169]
gi|384558875|gb|AFH99342.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori Shi169]
Length = 359
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 152/276 (55%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R+ GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRLKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ + ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVIRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|269119361|ref|YP_003307538.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Sebaldella
termitidis ATCC 33386]
gi|268613239|gb|ACZ07607.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [Sebaldella
termitidis ATCC 33386]
Length = 350
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 150/275 (54%), Gaps = 33/275 (12%)
Query: 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADA 147
+R V +GNV IG +PI +Q+MT DTKDV TV+++ +A G +VR+ V+ K +A+A
Sbjct: 2 SRIVKIGNVVIGGGNPIAIQSMTNTDTKDVDATVKQIKELASAGCHIVRMAVKDKYDAEA 61
Query: 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLEYTD 206
IKN + +PLVADIHF +AL E DKIR+NPGN D
Sbjct: 62 VKAIKNEVSA----VPLVADIHFDYRLALAAMENGIDKIRINPGNIGD------------ 105
Query: 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEF 265
E + ++ K+ +RIG N GSL ++ YG +P MV SA
Sbjct: 106 ----------EGKVKLVADEAKRRSIPIRIGINSGSLEKHLLMKYGHPTPEAMVASAMFH 155
Query: 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325
R+ K F + + S+K+SN M AY + DYPLHLGVTEAG E G +K
Sbjct: 156 VRLLEKYGFEDIVISLKSSNVKTMYDAYVKMS-----ENTDYPLHLGVTEAGTMERGSIK 210
Query: 326 SAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
SA+GIG LL G+GDTIRVSLTE P +EI + +
Sbjct: 211 SAMGIGGLLLRGIGDTIRVSLTENPVEEIGVAKTI 245
>gi|15611636|ref|NP_223287.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Helicobacter
pylori J99]
gi|8928165|sp|Q9ZLL0.1|ISPG_HELPJ RecName: Full=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
AltName: Full=1-hydroxy-2-methyl-2-(E)-butenyl
4-diphosphate synthase
gi|4155121|gb|AAD06152.1| putative [Helicobacter pylori J99]
Length = 359
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 151/276 (54%), Gaps = 32/276 (11%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R KT+ + +G VAIG + PI Q+MT + T D+ T ++ R GADLVR+ V +++
Sbjct: 5 RVKTKQIFIGGVAIGGDAPISTQSMTFSKTADIESTKNQIDRFKLAGADLVRVAVSNEKD 64
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204
A A E+K K +PL+ADIHF AL A+ D IR+NPGN +
Sbjct: 65 ALALKELK-----KVSPLPLIADIHFHYKFALIAAQSVDAIRINPGNIGSK--------- 110
Query: 205 TDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264
+ +V+ CK+ +RIG N GSL + YG +P+GMVESA
Sbjct: 111 -------------DKIKAVVDACKEKNIPIRIGVNAGSLEKQFDQKYGPTPKGMVESALY 157
Query: 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRM 324
A++ LDF +F S+KAS+ V ++AYR+L + YP HLGVTEAG +
Sbjct: 158 NAKLLEDLDFTDFKISLKASDVVRTIEAYRMLRPLVI-----YPFHLGVTEAGNLFSSSI 212
Query: 325 KSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
KSA+ +G LL +G+GDT+RVS+T E EI R +
Sbjct: 213 KSAMALGGLLMEGIGDTMRVSITGELENEIKVARAI 248
>gi|326382910|ref|ZP_08204600.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
neofelifaecis NRRL B-59395]
gi|326198500|gb|EGD55684.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gordonia
neofelifaecis NRRL B-59395]
Length = 384
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 151/273 (55%), Gaps = 35/273 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RRKTR + VG+V +GS+ PI VQ+M T T DV T++++ ++ G D+VR+ + +
Sbjct: 20 RRKTRQIRVGDVGVGSDFPISVQSMCTTKTHDVNATLQQIAQLTASGCDIVRVACPRQED 79
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV--AECFDKIRVNPGNFADRRAQFEQL 202
ADA ++ + IP++ADIHF P A C +RVNPGN
Sbjct: 80 ADAL-----PIIARKSQIPVIADIHFQPKYIFAAIDAGCA-AVRVNPGNI---------- 123
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVES 261
E+ ++ + + G +RIG N GSL R+M YG +P +VES
Sbjct: 124 ----KEFDGRVKEV-------AKAAGDAGIPIRIGVNAGSLDKRLMEKYGKATPEALVES 172
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A A + + F + S+K ++PVVMV+AYR L A+ DYPLHLGVTEAG
Sbjct: 173 ALWEASLFEEHGFGDIKISVKHNDPVVMVEAYRQLAAQ-----CDYPLHLGVTEAGPAFQ 227
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
G +KSA+ G LL +G+GDTIRVSL+ PP +EI
Sbjct: 228 GTIKSAVAFGALLSEGIGDTIRVSLSAPPAEEI 260
>gi|223985773|ref|ZP_03635817.1| hypothetical protein HOLDEFILI_03123 [Holdemania filiformis DSM
12042]
gi|223962283|gb|EEF66751.1| hypothetical protein HOLDEFILI_03123 [Holdemania filiformis DSM
12042]
Length = 405
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 158/278 (56%), Gaps = 34/278 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R +TR + VGN+ IG ++ + +Q+MT TK+VA TVE++ ++ + G +VR+ V + +
Sbjct: 58 RTETRPIQVGNLQIGGQNQVIIQSMTNTKTKNVAATVEQIRQLTEAGCQIVRMAVYDQED 117
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A A EIK + ++PLVADIHF +AL E DKIR+NPGN R
Sbjct: 118 ARAIREIKAQV-----SVPLVADIHFDYKLALTAIESGVDKIRINPGNIGAR-------- 164
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESA 262
E +V CK++ +RIG N GSL ++ YG M+ESA
Sbjct: 165 --------------ENVVAVVNACKQHQVPIRIGINSGSLEKAVLEKYGRPCAEAMIESA 210
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ I +LDFH+ S K+S+ ++ ++AYRL +E++ YPLHLGVTEAG
Sbjct: 211 RKHVEILEELDFHDICLSFKSSDVMLTIEAYRL-ASEVF----PYPLHLGVTEAGTFTSS 265
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
+KS+ +G LL DGLGDTIRVS++ P +E+ C++L
Sbjct: 266 AIKSSAALGALLMDGLGDTIRVSVSADPVEELRICKQL 303
>gi|261405361|ref|YP_003241602.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
sp. Y412MC10]
gi|329923474|ref|ZP_08278955.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
sp. HGF5]
gi|261281824|gb|ACX63795.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Paenibacillus sp. Y412MC10]
gi|328941274|gb|EGG37569.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Paenibacillus
sp. HGF5]
Length = 369
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 155/279 (55%), Gaps = 34/279 (12%)
Query: 84 VRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR 143
+R+ TR V VGN+ IG ++ + +Q+M T T DV TV E++R+ + G +VR+TV +
Sbjct: 3 LRQDTRPVKVGNLTIGGKNEVIIQSMCTTKTADVEATVAEILRLEEAGCQIVRVTVNNEE 62
Query: 144 EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQL 202
A A EIK K +IPLVADIHF +AL E DK+R+NPGN R
Sbjct: 63 AAAAIKEIK-----KRIHIPLVADIHFNYKLALMAIENGIDKVRINPGNIGKR------- 110
Query: 203 EYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVES 261
E +V+ CK+ G +RIG N GSL + ++ YG +P MVES
Sbjct: 111 ---------------EKVEAVVKACKEKGIPIRIGVNAGSLENHLLEKYGYPTPEAMVES 155
Query: 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGED 321
A I +LDFH+ + S+KAS+ + + AY AE+ YPLHLG+TEAG
Sbjct: 156 ALYHIGILEELDFHDIIVSLKASDVPMAIAAYT-KAAEV----IPYPLHLGITEAGTLFS 210
Query: 322 GRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRL 360
G +KSA G+G LL G+G T+R+SL+ P +EI R L
Sbjct: 211 GTVKSAAGLGALLSLGIGSTMRISLSADPVEEIKVGREL 249
>gi|398965248|ref|ZP_10680875.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM30]
gi|398147363|gb|EJM36073.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
[Pseudomonas sp. GM30]
Length = 369
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 155/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR +R + VGNV +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRVSRKIWVGNVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK LV+ +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIKQ-LVK----VPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|218133707|ref|ZP_03462511.1| hypothetical protein BACPEC_01576 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991082|gb|EEC57088.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [[Bacteroides]
pectinophilus ATCC 43243]
Length = 351
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 162/290 (55%), Gaps = 35/290 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
R T+TV +GN IG +PI +Q+MT T+DV TV +++ + G D++R TV ++
Sbjct: 3 RDNTKTVRIGNAVIGGGNPILIQSMTNTPTEDVRATVAQILELEKAGCDIIRCTVPNRQA 62
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
ADA EIK K +IPLVADIHF +A+ E DKIR+NPGN D
Sbjct: 63 ADAIAEIK-----KQIHIPLVADIHFDYRMAIAAIENGADKIRINPGNIGDNSK------ 111
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESA 262
+V+ K + +R+G N GSL D ++ Y G + G+VESA
Sbjct: 112 ----------------IKAVVDTAKDHNIPIRVGVNSGSLEKDLVVKYGGVTAEGLVESA 155
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+ +I L + N + S+K+S+ + ++A+ L+ ++ D+PLH+G+TEAG G
Sbjct: 156 LDKVKIIEDLGYDNLVISIKSSDVPMCIKAHELIASKT-----DHPLHVGITEAGTVYRG 210
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRR-LANLGMRAAELQ 371
+KSA+G+G +L G+GDTIRVSLT P +EI R L LG+R + ++
Sbjct: 211 SIKSAVGLGVILYHGIGDTIRVSLTGNPVEEIKAARYILQTLGIRQSGIE 260
>gi|404403285|ref|ZP_10994869.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Pseudomonas
fuscovaginae UPB0736]
Length = 369
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 154/272 (56%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++R + VG+V +G + PI VQ+MT +DT DVA TV ++ R+ G D+VR++V
Sbjct: 9 RRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLE 203
A+A IK + +PLVADIHF +ALRVAE D +R+NPGN
Sbjct: 69 AEAFGRIK-----QQVKVPLVADIHFDYKIALRVAELGVDCLRINPGNIGR--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
E+ +V+ + G +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
+L+F +F S+KAS+ + V+AYRLL E+ PLHLG+TEAG G
Sbjct: 162 LRHVEHLERLNFQDFKVSVKASDVFMAVEAYRLLAKEIV-----QPLHLGITEAGGLRSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSA+G+G LL +G+GDTIR+SL P +E+
Sbjct: 217 TVKSAVGLGMLLAEGIGDTIRISLAADPVEEV 248
>gi|407790347|ref|ZP_11137442.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gallaecimonas
xiamenensis 3-C-1]
gi|407204969|gb|EKE74948.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Gallaecimonas
xiamenensis 3-C-1]
Length = 370
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 151/272 (55%), Gaps = 34/272 (12%)
Query: 85 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE 144
RR++ + VGNV IG PI VQ+MT T DVA TV ++ I GADLVR++V
Sbjct: 9 RRQSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVAATVAQIQAIQRAGADLVRVSVPTMDA 68
Query: 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-CFDKIRVNPGNFADRRAQFEQLE 203
A+A L+++ +IPLVADIHF +AL+VAE D +R+NPGN
Sbjct: 69 AEAF-----KLIKEQVDIPLVADIHFDYRIALKVAEYGADCLRINPGNIGK--------- 114
Query: 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESA 262
EE +V+ + +RIG N GSL + YG+ +P +VESA
Sbjct: 115 -------------EERIRAVVDAARDRNIPIRIGVNGGSLEKDLQEKYGEPTPAALVESA 161
Query: 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDG 322
I +LDF NF S+KAS+ + V AYRLL ++ PLHLG+TEAG G
Sbjct: 162 MRHVDILDRLDFQNFKVSVKASDVFLAVDAYRLLAKQIV-----QPLHLGITEAGGARSG 216
Query: 323 RMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEI 354
+KSAIG+G LL +G+GDT+RVSL P +E+
Sbjct: 217 AVKSAIGLGMLLSEGIGDTLRVSLAADPVEEV 248
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,948,714,719
Number of Sequences: 23463169
Number of extensions: 432391745
Number of successful extensions: 1078996
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3079
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1064401
Number of HSP's gapped (non-prelim): 4121
length of query: 640
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 491
effective length of database: 8,863,183,186
effective search space: 4351822944326
effective search space used: 4351822944326
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)