Query 006566
Match_columns 640
No_of_seqs 222 out of 886
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 03:00:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006566.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006566hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g9p_A 4-hydroxy-3-methylbut-2 100.0 2E-116 7E-121 930.2 24.9 322 82-426 2-388 (406)
2 3noy_A 4-hydroxy-3-methylbut-2 100.0 4E-113 1E-117 894.1 26.0 312 83-426 11-350 (366)
3 1zco_A 2-dehydro-3-deoxyphosph 99.4 4.6E-12 1.6E-16 128.2 16.1 189 87-332 9-221 (262)
4 3nvt_A 3-deoxy-D-arabino-heptu 98.6 5.3E-07 1.8E-11 96.0 16.6 190 89-332 129-340 (385)
5 3noy_A 4-hydroxy-3-methylbut-2 98.3 8.9E-07 3E-11 93.6 7.2 90 538-638 178-267 (366)
6 1tx2_A DHPS, dihydropteroate s 97.7 0.0026 9E-08 65.7 19.9 208 115-362 60-289 (297)
7 1eye_A DHPS 1, dihydropteroate 97.6 0.0029 1E-07 64.8 19.2 168 115-315 26-212 (280)
8 2yci_X 5-methyltetrahydrofolat 97.5 0.0061 2.1E-07 62.0 19.8 209 95-342 2-236 (271)
9 4djd_C C/Fe-SP, corrinoid/iron 97.5 0.0023 8E-08 69.5 17.5 213 79-345 52-294 (446)
10 2vp8_A Dihydropteroate synthas 97.5 0.0048 1.7E-07 64.4 18.8 198 114-345 61-289 (318)
11 2h9a_A Carbon monoxide dehydro 97.4 0.0043 1.5E-07 67.4 17.3 205 87-345 60-293 (445)
12 2h9a_B CO dehydrogenase/acetyl 97.4 0.0073 2.5E-07 62.8 18.3 181 87-314 13-247 (310)
13 3k13_A 5-methyltetrahydrofolat 97.2 0.0053 1.8E-07 63.5 15.3 191 95-321 3-226 (300)
14 1aj0_A DHPS, dihydropteroate s 97.2 0.0062 2.1E-07 62.5 15.4 166 114-314 34-219 (282)
15 2y5s_A DHPS, dihydropteroate s 97.2 0.009 3.1E-07 61.7 16.5 193 115-345 43-272 (294)
16 2dqw_A Dihydropteroate synthas 97.1 0.0078 2.7E-07 62.2 15.2 165 115-315 49-232 (294)
17 1f6y_A 5-methyltetrahydrofolat 97.1 0.013 4.5E-07 59.2 16.2 192 115-345 22-229 (262)
18 4djd_D C/Fe-SP, corrinoid/iron 97.0 0.0087 3E-07 62.7 14.0 149 118-313 80-253 (323)
19 4g9p_A 4-hydroxy-3-methylbut-2 96.9 0.0011 3.7E-08 71.3 7.0 91 538-638 197-290 (406)
20 1vs1_A 3-deoxy-7-phosphoheptul 96.9 0.015 5.2E-07 59.4 15.1 143 87-280 23-179 (276)
21 3tr9_A Dihydropteroate synthas 96.8 0.036 1.2E-06 57.9 17.0 208 114-362 45-287 (314)
22 1q7z_A 5-methyltetrahydrofolat 96.8 0.019 6.5E-07 63.9 15.6 189 115-345 337-538 (566)
23 4h3d_A 3-dehydroquinate dehydr 96.7 0.099 3.4E-06 52.6 18.9 230 88-362 5-254 (258)
24 4hb7_A Dihydropteroate synthas 96.6 0.048 1.6E-06 55.9 16.1 158 115-314 27-204 (270)
25 2yr1_A 3-dehydroquinate dehydr 96.6 0.19 6.5E-06 50.5 20.0 195 89-325 6-215 (257)
26 3cqj_A L-ribulose-5-phosphate 96.5 0.033 1.1E-06 54.5 13.6 155 101-285 16-199 (295)
27 1vr6_A Phospho-2-dehydro-3-deo 96.5 0.037 1.3E-06 58.5 14.6 142 87-279 91-246 (350)
28 3o1n_A 3-dehydroquinate dehydr 96.3 0.11 3.7E-06 53.0 16.0 186 89-309 26-224 (276)
29 2vef_A Dihydropteroate synthas 96.2 0.044 1.5E-06 57.0 13.1 167 115-315 30-236 (314)
30 1nvm_A HOA, 4-hydroxy-2-oxoval 96.1 0.065 2.2E-06 55.7 13.8 158 112-311 24-199 (345)
31 3dx5_A Uncharacterized protein 96.1 0.13 4.6E-06 49.7 15.2 153 104-286 3-176 (286)
32 2wqp_A Polysialic acid capsule 96.1 0.15 5.2E-06 53.8 16.6 196 89-349 5-240 (349)
33 1k77_A EC1530, hypothetical pr 96.1 0.041 1.4E-06 52.4 11.3 144 114-285 14-181 (260)
34 1y0e_A Putative N-acetylmannos 96.0 0.43 1.5E-05 45.3 18.0 175 102-344 7-203 (223)
35 3kws_A Putative sugar isomeras 95.8 0.12 4E-06 50.4 13.4 153 102-299 26-187 (287)
36 3mcm_A 2-amino-4-hydroxy-6-hyd 95.7 0.066 2.3E-06 58.2 12.1 197 115-344 209-439 (442)
37 3qc0_A Sugar isomerase; TIM ba 95.4 0.11 3.8E-06 49.6 11.4 163 101-287 4-182 (275)
38 1vli_A Spore coat polysacchari 94.8 0.9 3.1E-05 48.7 17.3 198 89-349 14-252 (385)
39 3ivs_A Homocitrate synthase, m 94.8 0.66 2.2E-05 50.2 16.3 186 90-311 39-228 (423)
40 2qkf_A 3-deoxy-D-manno-octulos 94.7 0.15 5.1E-06 52.1 10.6 147 90-283 2-166 (280)
41 2ftp_A Hydroxymethylglutaryl-C 94.6 1 3.5E-05 45.8 16.6 171 114-311 26-208 (302)
42 1o60_A 2-dehydro-3-deoxyphosph 94.4 0.14 4.9E-06 52.7 9.7 147 89-282 4-168 (292)
43 1i60_A IOLI protein; beta barr 94.4 0.15 5.1E-06 48.7 9.2 155 104-286 3-178 (278)
44 1xla_A D-xylose isomerase; iso 94.3 0.14 4.8E-06 53.4 9.5 162 100-284 21-218 (394)
45 3cny_A Inositol catabolism pro 94.2 0.81 2.8E-05 44.3 14.1 146 114-287 30-195 (301)
46 3p3b_A Mandelate racemase/muco 94.1 0.11 3.6E-06 54.7 8.0 112 98-237 198-311 (392)
47 2rdx_A Mandelate racemase/muco 94.0 0.32 1.1E-05 50.5 11.6 107 98-238 186-295 (379)
48 2qw5_A Xylose isomerase-like T 94.0 1 3.5E-05 45.0 14.9 104 103-237 10-128 (335)
49 2cw6_A Hydroxymethylglutaryl-C 94.0 1.4 4.8E-05 44.6 16.0 173 114-311 23-205 (298)
50 1z41_A YQJM, probable NADH-dep 94.0 5.6 0.00019 40.9 20.6 224 90-344 8-306 (338)
51 2qgy_A Enolase from the enviro 93.8 0.36 1.2E-05 50.5 11.4 111 98-239 191-304 (391)
52 3tva_A Xylose isomerase domain 93.7 0.43 1.5E-05 46.4 11.2 135 114-285 20-187 (290)
53 2hk0_A D-psicose 3-epimerase; 93.7 1.4 4.8E-05 43.4 15.0 157 103-287 22-208 (309)
54 1ydn_A Hydroxymethylglutaryl-C 93.7 1.4 4.8E-05 44.3 15.2 170 114-312 22-205 (295)
55 1wa3_A 2-keto-3-deoxy-6-phosph 93.5 0.28 9.6E-06 46.1 9.1 93 114-238 18-111 (205)
56 3ble_A Citramalate synthase fr 93.4 2 6.7E-05 44.6 16.1 173 114-311 37-218 (337)
57 2pgw_A Muconate cycloisomerase 93.4 0.36 1.2E-05 50.3 10.5 109 98-238 188-299 (384)
58 3ngf_A AP endonuclease, family 93.4 1.2 4E-05 43.1 13.5 153 105-287 14-190 (269)
59 3fs2_A 2-dehydro-3-deoxyphosph 93.3 2 6.8E-05 44.6 15.7 145 89-279 27-188 (298)
60 2ztj_A Homocitrate synthase; ( 93.2 2.8 9.5E-05 44.3 17.1 167 114-311 21-194 (382)
61 3vni_A Xylose isomerase domain 93.0 3.3 0.00011 40.1 16.1 156 103-299 3-173 (294)
62 2q02_A Putative cytoplasmic pr 92.9 0.41 1.4E-05 45.7 9.3 148 103-285 8-173 (272)
63 3obe_A Sugar phosphate isomera 92.8 0.46 1.6E-05 47.5 10.0 121 99-241 18-172 (305)
64 3vnd_A TSA, tryptophan synthas 92.8 0.62 2.1E-05 47.3 11.0 95 115-234 29-151 (267)
65 3mqt_A Mandelate racemase/muco 92.6 0.4 1.4E-05 50.5 9.6 113 97-239 196-311 (394)
66 2ovl_A Putative racemase; stru 92.3 0.96 3.3E-05 46.8 11.9 109 98-237 188-299 (371)
67 2zvr_A Uncharacterized protein 92.1 2.4 8.1E-05 41.3 13.8 164 94-286 13-206 (290)
68 3mkc_A Racemase; metabolic pro 92.1 0.5 1.7E-05 49.8 9.6 112 97-238 201-315 (394)
69 3igs_A N-acetylmannosamine-6-p 92.1 1.9 6.4E-05 42.5 13.1 121 104-278 22-154 (232)
70 1ps9_A 2,4-dienoyl-COA reducta 92.1 5.2 0.00018 44.4 18.1 239 90-344 8-309 (671)
71 1rvk_A Isomerase/lactonizing e 92.0 0.61 2.1E-05 48.3 10.1 109 98-237 197-309 (382)
72 3qxb_A Putative xylose isomera 91.8 1.4 5E-05 43.6 12.1 165 102-286 20-217 (316)
73 3eeg_A 2-isopropylmalate synth 91.6 2.1 7.3E-05 44.3 13.5 159 115-302 25-191 (325)
74 1muw_A Xylose isomerase; atomi 91.5 0.59 2E-05 48.5 9.2 146 121-283 36-217 (386)
75 3i4k_A Muconate lactonizing en 91.5 1.1 3.9E-05 46.8 11.4 112 98-240 191-305 (383)
76 3p6l_A Sugar phosphate isomera 91.3 0.75 2.6E-05 44.1 9.1 138 102-286 10-168 (262)
77 3ktc_A Xylose isomerase; putat 91.2 0.15 5E-06 51.5 4.2 167 91-286 10-206 (333)
78 1yxy_A Putative N-acetylmannos 91.1 0.82 2.8E-05 43.9 9.2 110 99-240 15-140 (234)
79 2qul_A D-tagatose 3-epimerase; 91.1 1.2 4.2E-05 42.8 10.5 159 103-286 3-189 (290)
80 2hzg_A Mandelate racemase/muco 91.0 0.6 2E-05 49.0 8.8 110 98-237 190-304 (401)
81 3sjn_A Mandelate racemase/muco 91.0 0.75 2.6E-05 48.0 9.5 112 98-239 190-304 (374)
82 1mdl_A Mandelate racemase; iso 90.9 0.48 1.6E-05 48.7 7.8 109 98-237 186-297 (359)
83 1vzw_A Phosphoribosyl isomeras 90.8 0.69 2.3E-05 44.7 8.4 165 120-336 34-211 (244)
84 4e4u_A Mandalate racemase/muco 90.8 0.88 3E-05 48.4 9.9 109 98-237 198-309 (412)
85 2poz_A Putative dehydratase; o 90.6 0.85 2.9E-05 47.6 9.5 109 98-237 196-307 (392)
86 3ewb_X 2-isopropylmalate synth 90.6 8 0.00027 39.4 16.4 161 114-302 23-190 (293)
87 2gl5_A Putative dehydratase pr 90.5 0.69 2.3E-05 48.5 8.7 109 98-237 215-326 (410)
88 1kcz_A Beta-methylaspartase; b 90.5 1.4 4.9E-05 46.5 11.2 101 115-237 249-358 (413)
89 1chr_A Chloromuconate cycloiso 90.5 1.5 5.2E-05 45.5 11.2 113 97-240 184-299 (370)
90 1kko_A 3-methylaspartate ammon 90.4 1.2 4E-05 47.4 10.4 102 115-238 249-359 (413)
91 3tml_A 2-dehydro-3-deoxyphosph 90.4 1.9 6.7E-05 44.4 11.7 114 90-234 4-134 (288)
92 2v82_A 2-dehydro-3-deoxy-6-pho 90.3 1.9 6.6E-05 40.7 10.9 90 115-238 16-108 (212)
93 2zad_A Muconate cycloisomerase 90.3 1.7 5.7E-05 44.5 11.1 108 99-238 180-292 (345)
94 2nql_A AGR_PAT_674P, isomerase 90.2 0.47 1.6E-05 49.6 7.1 108 98-237 205-315 (388)
95 2ps2_A Putative mandelate race 90.2 0.83 2.8E-05 47.3 8.8 110 98-241 187-300 (371)
96 1rd5_A Tryptophan synthase alp 90.2 1.9 6.5E-05 42.4 11.1 106 112-243 26-155 (262)
97 3go2_A Putative L-alanine-DL-g 90.1 0.75 2.5E-05 48.7 8.6 106 98-237 210-318 (409)
98 2bmb_A Folic acid synthesis pr 90.0 3.3 0.00011 46.2 13.9 136 116-280 247-436 (545)
99 4e5t_A Mandelate racemase / mu 89.8 0.94 3.2E-05 47.9 9.1 109 98-237 205-316 (404)
100 4dwd_A Mandelate racemase/muco 89.8 1.8 6.1E-05 45.7 11.2 111 98-239 188-300 (393)
101 1vhc_A Putative KHG/KDPG aldol 89.8 1.6 5.4E-05 43.0 10.1 91 115-238 26-117 (224)
102 3o07_A Pyridoxine biosynthesis 89.7 0.47 1.6E-05 49.1 6.4 154 121-299 80-251 (291)
103 3q58_A N-acetylmannosamine-6-p 89.7 4.2 0.00014 40.0 13.0 122 104-279 22-155 (229)
104 3f4w_A Putative hexulose 6 pho 89.7 1.3 4.4E-05 41.7 9.0 96 111-235 6-107 (211)
105 1ydo_A HMG-COA lyase; TIM-barr 89.6 6.3 0.00021 40.4 14.7 171 114-311 24-206 (307)
106 3gd6_A Muconate cycloisomerase 89.6 6.3 0.00022 41.3 15.1 87 98-187 120-215 (391)
107 3ozy_A Putative mandelate race 89.5 0.96 3.3E-05 47.5 8.8 110 97-237 191-304 (389)
108 3l23_A Sugar phosphate isomera 89.4 1.1 3.7E-05 44.7 8.6 110 101-233 12-159 (303)
109 3q45_A Mandelate racemase/muco 89.3 1.6 5.6E-05 45.4 10.3 112 97-239 180-294 (368)
110 3v3w_A Starvation sensing prot 89.1 1.5 5.2E-05 46.7 10.1 110 98-238 223-335 (424)
111 3bjs_A Mandelate racemase/muco 88.8 1.3 4.4E-05 47.2 9.3 109 98-237 226-338 (428)
112 2og9_A Mandelate racemase/muco 88.7 1.2 4E-05 46.7 8.8 107 98-235 204-313 (393)
113 1nu5_A Chloromuconate cycloiso 88.6 1.4 4.7E-05 45.5 9.1 110 98-238 185-297 (370)
114 3lmz_A Putative sugar isomeras 88.5 0.86 3E-05 43.7 7.1 140 103-287 19-168 (257)
115 2o56_A Putative mandelate race 88.5 0.99 3.4E-05 47.3 8.0 109 98-237 212-323 (407)
116 2qde_A Mandelate racemase/muco 88.5 1.6 5.4E-05 45.7 9.6 110 98-238 186-298 (397)
117 2gdq_A YITF; mandelate racemas 88.4 1 3.5E-05 47.0 8.0 109 98-237 181-293 (382)
118 1sjd_A N-acylamino acid racema 88.4 1.9 6.6E-05 44.4 10.0 110 98-239 180-292 (368)
119 1bxb_A Xylose isomerase; xylos 88.3 2.4 8.2E-05 44.0 10.7 168 93-283 12-217 (387)
120 1r30_A Biotin synthase; SAM ra 88.2 7.4 0.00025 40.0 14.2 144 114-314 98-245 (369)
121 3rcy_A Mandelate racemase/muco 88.0 0.94 3.2E-05 48.6 7.6 109 98-237 200-311 (433)
122 3ayv_A Putative uncharacterize 88.0 3.1 0.00011 39.6 10.5 131 122-285 14-165 (254)
123 3rr1_A GALD, putative D-galact 87.8 0.81 2.8E-05 48.6 6.9 110 98-238 175-287 (405)
124 2p8b_A Mandelate racemase/muco 87.8 1.1 3.7E-05 46.2 7.7 110 98-238 182-295 (369)
125 3o1n_A 3-dehydroquinate dehydr 87.5 1.6 5.6E-05 44.3 8.6 53 114-166 172-226 (276)
126 4e38_A Keto-hydroxyglutarate-a 87.4 3.1 0.00011 41.5 10.4 110 115-279 43-153 (232)
127 3e02_A Uncharacterized protein 87.4 3.9 0.00013 42.5 11.5 229 115-364 29-288 (311)
128 3rmj_A 2-isopropylmalate synth 87.4 9.4 0.00032 40.3 14.6 160 114-302 30-197 (370)
129 3r4e_A Mandelate racemase/muco 87.2 2 6.9E-05 45.6 9.5 110 98-238 217-329 (418)
130 2pp0_A L-talarate/galactarate 87.2 1.7 5.9E-05 45.6 8.9 107 98-235 217-326 (398)
131 3stp_A Galactonate dehydratase 87.1 1.2 4.3E-05 47.3 7.9 110 97-237 226-338 (412)
132 1qop_A Tryptophan synthase alp 87.0 4.6 0.00016 40.2 11.5 101 108-234 22-150 (268)
133 1tkk_A Similar to chloromucona 87.0 2.8 9.5E-05 43.2 10.2 109 98-238 182-296 (366)
134 4dxk_A Mandelate racemase / mu 86.9 1.8 6.1E-05 45.7 8.9 110 98-238 207-319 (400)
135 3vcn_A Mannonate dehydratase; 86.7 1.7 5.8E-05 46.4 8.6 106 98-234 224-332 (425)
136 2ox4_A Putative mandelate race 86.7 0.87 3E-05 47.6 6.3 109 98-237 206-317 (403)
137 2x7v_A Probable endonuclease 4 86.7 11 0.00039 35.9 13.7 138 122-299 16-166 (287)
138 3lot_A Uncharacterized protein 86.6 5.4 0.00018 41.6 12.1 225 115-364 29-291 (314)
139 2zds_A Putative DNA-binding pr 86.5 26 0.00088 34.4 21.3 161 103-286 4-214 (340)
140 1tzz_A Hypothetical protein L1 86.5 2.4 8.3E-05 44.2 9.5 109 98-237 207-325 (392)
141 2g0w_A LMO2234 protein; putati 86.4 3.7 0.00013 40.3 10.4 61 102-165 23-87 (296)
142 2fym_A Enolase; RNA degradosom 86.4 5 0.00017 42.8 12.1 100 115-241 267-372 (431)
143 3eez_A Putative mandelate race 86.4 1.1 3.6E-05 47.0 6.7 111 98-242 186-299 (378)
144 1mxs_A KDPG aldolase; 2-keto-3 86.3 4.3 0.00015 39.9 10.7 91 115-238 35-126 (225)
145 1wbh_A KHG/KDPG aldolase; lyas 86.3 4.7 0.00016 39.3 10.8 92 114-238 24-116 (214)
146 3gr7_A NADPH dehydrogenase; fl 86.2 17 0.00057 37.7 15.6 207 89-311 7-248 (340)
147 3dip_A Enolase; structural gen 86.2 2.6 8.9E-05 44.7 9.7 110 98-238 210-323 (410)
148 3e49_A Uncharacterized protein 86.2 4 0.00014 42.5 10.8 229 115-364 29-288 (311)
149 1sfl_A 3-dehydroquinate dehydr 86.1 1.7 5.9E-05 43.0 7.7 54 112-166 136-191 (238)
150 2qq6_A Mandelate racemase/muco 86.1 1 3.4E-05 47.4 6.4 109 98-237 207-318 (410)
151 1geq_A Tryptophan synthase alp 85.9 8.5 0.00029 37.0 12.4 112 103-242 5-144 (248)
152 3vav_A 3-methyl-2-oxobutanoate 85.8 18 0.00062 37.1 15.3 151 127-329 45-229 (275)
153 3nav_A Tryptophan synthase alp 85.8 5.7 0.0002 40.3 11.6 95 115-234 31-153 (271)
154 3sz8_A 2-dehydro-3-deoxyphosph 85.8 13 0.00046 38.2 14.3 144 90-279 6-167 (285)
155 4g38_A SIR-HP, sirhp, sulfite 85.7 2.7 9.4E-05 46.8 9.9 152 254-412 278-498 (570)
156 3mwc_A Mandelate racemase/muco 85.7 2.3 7.8E-05 45.0 8.9 109 98-238 202-313 (400)
157 1ka9_F Imidazole glycerol phos 85.6 3.7 0.00013 39.5 9.7 176 118-344 31-224 (252)
158 1h5y_A HISF; histidine biosynt 85.5 0.5 1.7E-05 44.8 3.5 157 114-311 29-203 (253)
159 1v77_A PH1877P, hypothetical p 85.5 0.82 2.8E-05 44.2 5.0 76 221-305 114-190 (212)
160 4fxs_A Inosine-5'-monophosphat 85.4 2.7 9.2E-05 45.9 9.5 100 119-234 231-337 (496)
161 3ddm_A Putative mandelate race 85.3 2.3 7.8E-05 44.9 8.7 107 98-235 196-306 (392)
162 3jva_A Dipeptide epimerase; en 85.2 1.6 5.3E-05 45.2 7.2 112 98-240 180-294 (354)
163 2qdd_A Mandelate racemase/muco 84.7 1.9 6.6E-05 44.7 7.7 105 98-237 187-294 (378)
164 2hxt_A L-fuconate dehydratase; 84.4 3.8 0.00013 43.6 9.9 107 98-234 239-348 (441)
165 1sfl_A 3-dehydroquinate dehydr 84.4 21 0.00073 35.2 14.7 176 115-325 14-201 (238)
166 1xim_A D-xylose isomerase; iso 84.4 3.1 0.00011 43.2 9.1 153 113-285 31-219 (393)
167 2rdx_A Mandelate racemase/muco 84.3 2.7 9.4E-05 43.6 8.6 85 98-185 127-215 (379)
168 3u0h_A Xylose isomerase domain 83.9 2.1 7.3E-05 40.8 7.1 156 104-285 6-182 (281)
169 2yr1_A 3-dehydroquinate dehydr 83.9 2.8 9.5E-05 42.1 8.2 54 112-166 150-205 (257)
170 3khj_A Inosine-5-monophosphate 83.9 8.7 0.0003 40.3 12.3 108 102-234 96-210 (361)
171 2ekc_A AQ_1548, tryptophan syn 83.7 4.6 0.00016 40.2 9.7 94 115-234 28-150 (262)
172 1r0m_A N-acylamino acid racema 83.7 2.5 8.6E-05 43.7 8.0 95 116-239 201-298 (375)
173 3ro6_B Putative chloromuconate 83.7 1.1 3.9E-05 46.3 5.4 111 98-239 181-295 (356)
174 2oz8_A MLL7089 protein; struct 83.5 6.1 0.00021 41.3 10.9 106 98-237 187-296 (389)
175 3jva_A Dipeptide epimerase; en 83.3 3.9 0.00013 42.2 9.3 84 98-185 122-209 (354)
176 2nx9_A Oxaloacetate decarboxyl 83.0 34 0.0012 37.3 16.8 154 118-312 30-207 (464)
177 4dye_A Isomerase; enolase fami 82.9 3.6 0.00012 43.5 9.0 105 101-238 212-319 (398)
178 3my9_A Muconate cycloisomerase 82.8 1.6 5.5E-05 45.5 6.2 110 98-238 188-300 (377)
179 3q58_A N-acetylmannosamine-6-p 82.8 1.9 6.6E-05 42.4 6.4 68 120-194 90-162 (229)
180 3fcp_A L-Ala-D/L-Glu epimerase 82.7 4.4 0.00015 42.3 9.5 111 98-239 190-303 (381)
181 3tji_A Mandelate racemase/muco 82.5 3.7 0.00013 43.8 8.9 106 98-234 219-327 (422)
182 3r0u_A Enzyme of enolase super 82.2 5.6 0.00019 41.7 10.0 112 98-239 183-298 (379)
183 2yw3_A 4-hydroxy-2-oxoglutarat 82.0 4.5 0.00015 39.0 8.5 88 116-238 23-111 (207)
184 3s5s_A Mandelate racemase/muco 81.9 17 0.00058 38.1 13.6 135 98-239 127-299 (389)
185 1jpd_X L-Ala-D/L-Glu epimerase 81.9 7.9 0.00027 39.4 10.8 119 115-238 131-278 (324)
186 2r14_A Morphinone reductase; H 81.9 23 0.00077 37.3 14.5 182 89-281 13-276 (377)
187 1qtw_A Endonuclease IV; DNA re 81.8 9.4 0.00032 36.5 10.7 139 121-285 15-182 (285)
188 3dgb_A Muconate cycloisomerase 81.8 3.9 0.00013 42.8 8.7 111 98-239 191-304 (382)
189 3igs_A N-acetylmannosamine-6-p 81.7 2.7 9.1E-05 41.4 6.9 68 120-194 90-162 (232)
190 3u9i_A Mandelate racemase/muco 81.7 19 0.00065 37.9 13.9 120 113-238 162-327 (393)
191 2ocz_A 3-dehydroquinate dehydr 81.6 1.9 6.5E-05 42.6 5.9 49 118-166 128-178 (231)
192 3eez_A Putative mandelate race 81.5 4 0.00014 42.7 8.6 85 98-185 127-215 (378)
193 3i6e_A Muconate cycloisomerase 81.4 2.7 9.3E-05 44.0 7.3 95 116-238 204-301 (385)
194 3tj4_A Mandelate racemase; eno 81.3 3 0.0001 43.4 7.6 106 98-234 194-302 (372)
195 3v5c_A Mandelate racemase/muco 81.3 2.5 8.4E-05 44.6 7.0 99 116-239 213-313 (392)
196 2v5j_A 2,4-dihydroxyhept-2-ENE 81.2 3.8 0.00013 41.8 8.1 143 123-302 103-277 (287)
197 3tqp_A Enolase; energy metabol 81.2 7.2 0.00025 42.0 10.6 105 115-246 263-373 (428)
198 3ajx_A 3-hexulose-6-phosphate 80.9 4.6 0.00016 37.8 8.0 96 111-238 6-108 (207)
199 4e4f_A Mannonate dehydratase; 80.6 2.5 8.6E-05 45.1 6.8 106 98-234 225-333 (426)
200 1rvk_A Isomerase/lactonizing e 80.5 4.2 0.00014 42.1 8.3 69 114-185 147-226 (382)
201 3dg3_A Muconate cycloisomerase 80.5 3.4 0.00012 42.9 7.6 110 98-239 182-294 (367)
202 2oz8_A MLL7089 protein; struct 80.4 5 0.00017 41.9 8.9 67 115-184 144-215 (389)
203 2y88_A Phosphoribosyl isomeras 80.4 3.2 0.00011 39.7 6.9 163 120-336 33-214 (244)
204 3rcy_A Mandelate racemase/muco 80.3 5.7 0.00019 42.5 9.4 68 115-185 145-229 (433)
205 4h3d_A 3-dehydroquinate dehydr 80.2 5.4 0.00018 40.0 8.7 55 112-166 150-206 (258)
206 3iix_A Biotin synthetase, puta 80.0 23 0.0008 35.4 13.3 136 115-276 84-224 (348)
207 1vyr_A Pentaerythritol tetrani 79.9 34 0.0012 35.7 15.0 210 90-312 8-271 (364)
208 3tcs_A Racemase, putative; PSI 79.9 3.7 0.00013 43.3 7.7 115 98-243 196-313 (388)
209 1xfc_A Alanine racemase; alpha 79.6 4.8 0.00017 41.6 8.4 144 125-313 55-212 (384)
210 2qgy_A Enolase from the enviro 79.3 7.2 0.00024 40.7 9.6 85 98-185 128-220 (391)
211 2pgw_A Muconate cycloisomerase 78.9 6.5 0.00022 40.8 9.1 84 98-185 129-216 (384)
212 3stp_A Galactonate dehydratase 78.6 5.3 0.00018 42.5 8.5 85 98-185 160-256 (412)
213 2ps2_A Putative mandelate race 78.6 4.1 0.00014 42.1 7.4 85 98-185 128-217 (371)
214 4hpn_A Putative uncharacterize 78.5 8.1 0.00028 39.9 9.7 106 98-234 185-293 (378)
215 3t6c_A RSPA, putative MAND fam 78.5 4.5 0.00016 43.4 8.0 106 98-234 237-345 (440)
216 3aam_A Endonuclease IV, endoiv 78.4 9.9 0.00034 36.4 9.7 130 121-285 17-172 (270)
217 3toy_A Mandelate racemase/muco 78.4 7.5 0.00026 40.8 9.5 106 98-234 210-318 (383)
218 3rr1_A GALD, putative D-galact 78.3 6.3 0.00022 41.8 9.0 68 114-185 123-204 (405)
219 3r4e_A Mandelate racemase/muco 78.3 4.7 0.00016 42.8 8.0 85 98-185 125-246 (418)
220 3sbf_A Mandelate racemase / mu 78.2 2.8 9.5E-05 44.2 6.2 106 98-234 198-306 (401)
221 3gd6_A Muconate cycloisomerase 78.1 5.5 0.00019 41.8 8.3 111 98-240 183-298 (391)
222 1rpx_A Protein (ribulose-phosp 78.1 7 0.00024 37.3 8.5 108 105-243 13-130 (230)
223 3qtp_A Enolase 1; glycolysis, 77.9 16 0.00056 39.8 12.1 104 115-245 279-387 (441)
224 3l5l_A Xenobiotic reductase A; 77.9 12 0.00043 38.9 10.9 214 90-312 7-266 (363)
225 1rqb_A Transcarboxylase 5S sub 77.8 42 0.0015 37.3 15.6 152 117-311 46-225 (539)
226 3uj2_A Enolase 1; enzyme funct 77.7 9.1 0.00031 41.5 10.1 103 116-245 290-398 (449)
227 3ijd_A Uncharacterized protein 77.6 3.9 0.00013 42.6 6.9 113 119-246 166-287 (315)
228 2ovl_A Putative racemase; stru 77.6 8.7 0.0003 39.7 9.6 68 115-185 145-217 (371)
229 2qq6_A Mandelate racemase/muco 77.5 7.2 0.00025 40.9 9.1 67 116-185 149-236 (410)
230 2pp0_A L-talarate/galactarate 77.1 8.8 0.0003 40.2 9.6 84 98-185 155-246 (398)
231 3ugv_A Enolase; enzyme functio 77.1 3.4 0.00012 43.5 6.4 106 98-234 216-324 (390)
232 3vcn_A Mannonate dehydratase; 77.0 4.4 0.00015 43.2 7.3 84 97-185 131-253 (425)
233 2ptz_A Enolase; lyase, glycoly 77.0 9.2 0.00032 40.9 9.8 101 116-243 273-379 (432)
234 3v3w_A Starvation sensing prot 76.6 5.6 0.00019 42.4 8.0 83 98-185 131-252 (424)
235 2qde_A Mandelate racemase/muco 76.4 5.9 0.0002 41.4 8.0 69 115-186 144-216 (397)
236 2ox4_A Putative mandelate race 76.3 7.6 0.00026 40.5 8.8 69 115-186 145-236 (403)
237 1mzh_A Deoxyribose-phosphate a 76.3 6.4 0.00022 38.4 7.7 77 103-183 117-199 (225)
238 2pge_A MENC; OSBS, NYSGXRC, PS 76.3 47 0.0016 34.4 14.7 159 115-299 161-336 (377)
239 4fo4_A Inosine 5'-monophosphat 76.2 12 0.00041 39.5 10.3 99 120-234 109-214 (366)
240 2zad_A Muconate cycloisomerase 76.2 10 0.00034 38.7 9.5 157 115-299 138-309 (345)
241 3dg3_A Muconate cycloisomerase 76.2 7.3 0.00025 40.4 8.5 69 114-185 137-211 (367)
242 4h2h_A Mandelate racemase/muco 75.9 8.9 0.0003 39.9 9.1 85 98-184 132-221 (376)
243 1tkk_A Similar to chloromucona 75.7 8.2 0.00028 39.7 8.7 67 115-184 139-210 (366)
244 2zc8_A N-acylamino acid racema 75.6 3.4 0.00012 42.6 5.8 94 116-238 194-290 (369)
245 3usb_A Inosine-5'-monophosphat 75.5 10 0.00034 41.6 9.8 100 119-234 256-362 (511)
246 3l9c_A 3-dehydroquinate dehydr 75.3 6.2 0.00021 39.9 7.5 48 119-166 160-209 (259)
247 4af0_A Inosine-5'-monophosphat 75.2 2.4 8.2E-05 47.5 4.8 66 119-187 331-412 (556)
248 2poz_A Putative dehydratase; o 75.1 10 0.00036 39.4 9.4 86 98-186 116-226 (392)
249 3ik4_A Mandelate racemase/muco 75.1 14 0.00047 38.4 10.2 95 116-238 199-297 (365)
250 1wv2_A Thiazole moeity, thiazo 74.9 5.6 0.00019 40.8 7.0 89 99-192 101-220 (265)
251 2vd8_A Alanine racemase; pyrid 74.8 6.4 0.00022 41.0 7.7 140 125-312 56-209 (391)
252 1yx1_A Hypothetical protein PA 74.7 1.8 6.3E-05 41.6 3.4 127 122-285 27-166 (264)
253 3aal_A Probable endonuclease 4 74.6 28 0.00095 34.1 11.9 138 122-299 22-171 (303)
254 3lab_A Putative KDPG (2-keto-3 74.5 14 0.00046 36.7 9.5 109 115-279 22-138 (217)
255 4avf_A Inosine-5'-monophosphat 74.5 11 0.00038 40.9 9.8 100 119-234 229-335 (490)
256 4e8g_A Enolase, mandelate race 74.4 4.3 0.00015 42.8 6.4 95 117-242 223-320 (391)
257 2qdd_A Mandelate racemase/muco 74.4 9.5 0.00033 39.5 8.9 66 115-183 144-214 (378)
258 2qgq_A Protein TM_1862; alpha- 74.4 57 0.002 32.6 14.3 144 114-280 32-191 (304)
259 2o56_A Putative mandelate race 74.3 9 0.00031 40.0 8.7 68 116-186 152-242 (407)
260 1wa3_A 2-keto-3-deoxy-6-phosph 74.3 4.2 0.00015 38.0 5.7 61 121-191 73-134 (205)
261 3i4k_A Muconate lactonizing en 74.3 8 0.00027 40.4 8.3 68 114-184 146-219 (383)
262 2gl5_A Putative dehydratase pr 74.0 9.4 0.00032 39.9 8.8 69 116-187 150-246 (410)
263 4af0_A Inosine-5'-monophosphat 73.6 9.5 0.00033 42.7 9.0 102 118-234 280-387 (556)
264 2og9_A Mandelate racemase/muco 73.5 14 0.00049 38.5 10.0 68 116-186 162-234 (393)
265 2p8b_A Mandelate racemase/muco 73.4 8.9 0.0003 39.4 8.3 69 115-186 140-213 (369)
266 4a35_A Mitochondrial enolase s 73.4 14 0.00047 39.7 10.0 114 98-242 242-358 (441)
267 2gdq_A YITF; mandelate racemas 73.3 13 0.00044 38.7 9.5 65 118-185 141-210 (382)
268 3q45_A Mandelate racemase/muco 73.1 8 0.00027 40.2 7.9 69 114-185 138-210 (368)
269 3ozy_A Putative mandelate race 73.0 7.6 0.00026 40.7 7.8 68 114-184 149-220 (389)
270 3sbf_A Mandelate racemase / mu 73.0 5.8 0.0002 41.8 6.9 85 98-185 115-227 (401)
271 3p3b_A Mandelate racemase/muco 72.9 11 0.00038 39.4 9.0 67 118-187 150-229 (392)
272 3tji_A Mandelate racemase/muco 72.9 6.3 0.00021 42.0 7.2 86 97-185 135-248 (422)
273 2akz_A Gamma enolase, neural; 72.8 14 0.00047 39.9 9.8 99 115-242 270-374 (439)
274 1qo2_A Molecule: N-((5-phospho 72.7 3.3 0.00011 39.9 4.6 171 119-336 31-209 (241)
275 1nu5_A Chloromuconate cycloiso 72.7 8.1 0.00028 39.7 7.8 68 115-185 141-214 (370)
276 4h83_A Mandelate racemase/muco 72.6 10 0.00035 39.7 8.7 107 98-234 206-315 (388)
277 4hnl_A Mandelate racemase/muco 72.2 9.2 0.00032 40.4 8.2 85 98-185 135-247 (421)
278 3ijl_A Muconate cycloisomerase 72.2 5.3 0.00018 41.1 6.3 101 110-239 180-282 (338)
279 3qn3_A Enolase; structural gen 72.0 16 0.00053 39.3 10.0 104 116-246 262-371 (417)
280 4adt_A Pyridoxine biosynthetic 71.8 4.5 0.00016 41.7 5.6 62 121-188 90-152 (297)
281 2o7s_A DHQ-SDH PR, bifunctiona 71.8 10 0.00035 41.2 8.7 49 113-166 129-179 (523)
282 3tj4_A Mandelate racemase; eno 71.6 21 0.00071 37.1 10.6 68 115-185 150-223 (372)
283 1tzz_A Hypothetical protein L1 71.5 15 0.0005 38.3 9.5 68 115-185 164-236 (392)
284 3hgj_A Chromate reductase; TIM 71.4 22 0.00075 36.8 10.7 213 90-312 7-259 (349)
285 1jcn_A Inosine monophosphate d 71.3 15 0.00053 39.6 9.9 62 120-187 256-323 (514)
286 3no5_A Uncharacterized protein 71.0 8.8 0.0003 39.2 7.5 191 116-345 28-236 (275)
287 3bg3_A Pyruvate carboxylase, m 70.9 73 0.0025 36.7 15.7 161 115-312 122-311 (718)
288 1mdl_A Mandelate racemase; iso 70.9 10 0.00035 38.8 8.1 68 115-185 143-215 (359)
289 3otr_A Enolase; structural gen 70.5 6.7 0.00023 42.9 6.8 105 116-246 282-391 (452)
290 1y0e_A Putative N-acetylmannos 70.4 9.6 0.00033 36.0 7.2 62 121-187 129-203 (223)
291 4e38_A Keto-hydroxyglutarate-a 70.4 5.7 0.00019 39.7 5.8 63 120-192 95-158 (232)
292 2nva_A Arginine decarboxylase, 69.9 13 0.00044 38.1 8.5 153 120-312 52-214 (372)
293 3hgj_A Chromate reductase; TIM 69.8 21 0.00073 36.9 10.2 93 98-196 216-326 (349)
294 2yzr_A Pyridoxal biosynthesis 69.8 9.1 0.00031 40.3 7.4 154 121-299 86-293 (330)
295 2pa6_A Enolase; glycolysis, ly 69.6 20 0.00067 38.0 10.1 96 116-240 268-369 (427)
296 3t6c_A RSPA, putative MAND fam 69.4 12 0.00039 40.2 8.3 84 97-185 136-266 (440)
297 3chv_A Prokaryotic domain of u 69.3 12 0.00039 38.6 7.9 192 116-345 32-240 (284)
298 2qf7_A Pyruvate carboxylase pr 69.3 78 0.0027 38.2 16.1 162 115-312 570-758 (1165)
299 2nql_A AGR_PAT_674P, isomerase 69.3 15 0.0005 38.3 8.9 68 115-185 163-234 (388)
300 4e8g_A Enolase, mandelate race 69.2 14 0.00047 38.9 8.7 85 98-185 146-236 (391)
301 3fv9_G Mandelate racemase/muco 69.1 9.6 0.00033 40.0 7.5 82 98-182 127-217 (386)
302 3lab_A Putative KDPG (2-keto-3 68.9 5.4 0.00018 39.6 5.2 63 120-192 74-143 (217)
303 2vws_A YFAU, 2-keto-3-deoxy su 68.8 12 0.0004 37.5 7.7 142 122-300 81-254 (267)
304 1m3u_A 3-methyl-2-oxobutanoate 68.7 1.1E+02 0.0036 31.3 15.3 155 126-328 32-216 (264)
305 3fv9_G Mandelate racemase/muco 68.4 9.3 0.00032 40.1 7.2 111 98-242 191-305 (386)
306 2htm_A Thiazole biosynthesis p 68.3 14 0.00049 37.9 8.3 83 111-193 104-212 (268)
307 1vfs_A Alanine racemase; TIM-b 68.2 20 0.00068 37.1 9.6 145 126-313 52-208 (386)
308 3toy_A Mandelate racemase/muco 68.2 20 0.0007 37.5 9.8 71 112-185 163-239 (383)
309 3ro6_B Putative chloromuconate 67.9 11 0.00036 39.0 7.4 68 114-184 138-209 (356)
310 3ffs_A Inosine-5-monophosphate 67.7 12 0.00042 40.0 8.1 62 121-188 146-212 (400)
311 4e4u_A Mandalate racemase/muco 67.6 13 0.00044 39.4 8.2 68 115-185 143-227 (412)
312 1a0c_A Xylose isomerase; ketol 67.5 75 0.0026 34.1 14.1 146 126-299 88-255 (438)
313 3ugv_A Enolase; enzyme functio 67.4 22 0.00075 37.3 9.8 68 115-185 170-245 (390)
314 2chr_A Chloromuconate cycloiso 67.1 9.4 0.00032 39.3 6.8 110 98-238 185-297 (370)
315 2qjg_A Putative aldolase MJ040 67.0 26 0.00088 34.2 9.7 142 121-309 48-205 (273)
316 3dxi_A Putative aldolase; TIM 66.6 45 0.0015 34.5 11.8 158 113-312 19-192 (320)
317 1ur4_A Galactanase; hydrolase, 66.3 52 0.0018 35.1 12.5 92 123-234 53-157 (399)
318 3khj_A Inosine-5-monophosphate 66.3 9.6 0.00033 40.0 6.8 66 120-187 155-235 (361)
319 1w6t_A Enolase; bacterial infe 66.0 26 0.0009 37.5 10.3 99 115-240 279-383 (444)
320 2al1_A Enolase 1, 2-phospho-D- 65.7 20 0.00069 38.5 9.3 99 116-243 274-378 (436)
321 3i6e_A Muconate cycloisomerase 65.5 14 0.00047 38.7 7.8 67 114-184 146-217 (385)
322 1oy0_A Ketopantoate hydroxymet 65.4 79 0.0027 32.5 13.1 153 126-328 49-234 (281)
323 4fo4_A Inosine 5'-monophosphat 64.9 9.3 0.00032 40.4 6.4 66 120-187 159-239 (366)
324 3r2g_A Inosine 5'-monophosphat 64.9 19 0.00065 38.1 8.7 65 118-187 99-168 (361)
325 3jr2_A Hexulose-6-phosphate sy 64.7 20 0.00067 34.3 8.1 95 111-234 12-112 (218)
326 4hnl_A Mandelate racemase/muco 64.6 10 0.00035 40.0 6.7 96 115-238 232-330 (421)
327 3o07_A Pyridoxine biosynthesis 64.0 12 0.00042 38.8 6.8 113 119-243 123-277 (291)
328 4dwd_A Mandelate racemase/muco 63.8 23 0.00079 37.3 9.1 68 115-185 138-217 (393)
329 3dgb_A Muconate cycloisomerase 63.5 18 0.00063 37.7 8.3 84 98-184 130-219 (382)
330 1o66_A 3-methyl-2-oxobutanoate 63.5 1E+02 0.0035 31.6 13.5 153 126-328 32-216 (275)
331 1tz9_A Mannonate dehydratase; 63.5 26 0.0009 35.7 9.3 155 124-286 27-259 (367)
332 2ozt_A TLR1174 protein; struct 63.3 27 0.00092 35.7 9.3 107 99-238 159-272 (332)
333 2hzg_A Mandelate racemase/muco 63.3 11 0.00038 39.3 6.6 67 115-184 144-220 (401)
334 3r0u_A Enzyme of enolase super 62.9 24 0.00084 36.9 9.1 77 105-184 131-211 (379)
335 3my9_A Muconate cycloisomerase 62.2 12 0.00042 38.8 6.7 68 114-184 144-216 (377)
336 4avf_A Inosine-5'-monophosphat 61.8 12 0.00041 40.7 6.7 68 119-188 279-361 (490)
337 3mkc_A Racemase; metabolic pro 61.2 25 0.00086 36.9 8.8 85 98-185 130-232 (394)
338 3qja_A IGPS, indole-3-glycerol 60.8 80 0.0028 31.8 12.1 65 122-192 126-193 (272)
339 2qgh_A Diaminopimelate decarbo 60.5 79 0.0027 33.0 12.5 25 220-244 184-210 (425)
340 1thf_D HISF protein; thermophI 60.4 19 0.00063 34.6 7.1 180 119-344 31-223 (253)
341 3inp_A D-ribulose-phosphate 3- 60.3 18 0.0006 36.3 7.1 148 101-296 86-242 (246)
342 3gk0_A PNP synthase, pyridoxin 60.1 15 0.00051 37.9 6.6 81 143-241 139-220 (278)
343 1dbt_A Orotidine 5'-phosphate 59.9 36 0.0012 33.1 9.2 138 112-281 10-163 (239)
344 2hsa_B 12-oxophytodienoate red 59.6 1.8E+02 0.0062 30.8 17.0 232 90-344 21-347 (402)
345 1wuf_A Hypothetical protein LI 59.0 16 0.00055 38.2 6.9 57 159-237 250-309 (393)
346 3cyj_A Mandelate racemase/muco 58.9 39 0.0013 34.9 9.7 69 114-185 142-214 (372)
347 1thf_D HISF protein; thermophI 58.8 18 0.00062 34.6 6.8 90 120-236 153-250 (253)
348 3tsm_A IGPS, indole-3-glycerol 58.6 42 0.0015 34.0 9.7 90 121-238 82-176 (272)
349 1h1y_A D-ribulose-5-phosphate 58.4 48 0.0016 31.8 9.6 109 101-242 5-124 (228)
350 3mqt_A Mandelate racemase/muco 58.3 24 0.0008 37.0 8.0 64 119-185 155-227 (394)
351 1chr_A Chloromuconate cycloiso 58.3 27 0.00092 36.1 8.4 68 114-184 140-213 (370)
352 3ik4_A Mandelate racemase/muco 58.1 35 0.0012 35.3 9.2 74 105-182 132-210 (365)
353 1sjd_A N-acylamino acid racema 58.0 23 0.00078 36.4 7.7 67 115-185 140-208 (368)
354 4e5t_A Mandelate racemase / mu 57.8 25 0.00085 37.0 8.1 69 114-185 149-234 (404)
355 1icp_A OPR1, 12-oxophytodienoa 57.7 32 0.0011 36.2 8.9 209 90-311 19-275 (376)
356 3qld_A Mandelate racemase/muco 57.0 19 0.00064 37.8 7.0 86 124-237 209-297 (388)
357 1m5w_A Pyridoxal phosphate bio 57.0 12 0.00042 37.9 5.3 81 143-241 111-192 (243)
358 3bjs_A Mandelate racemase/muco 56.8 27 0.00093 37.0 8.3 68 115-185 183-255 (428)
359 3llx_A Predicted amino acid al 56.6 13 0.00045 38.4 5.7 151 120-314 51-218 (376)
360 2p3e_A Diaminopimelate decarbo 56.5 31 0.0011 35.8 8.5 48 123-180 72-121 (420)
361 3icg_A Endoglucanase D; cellul 56.2 2E+02 0.007 30.8 15.1 51 120-172 47-110 (515)
362 2zbt_A Pyridoxal biosynthesis 55.9 1.8 6E-05 43.4 -1.0 62 121-188 90-152 (297)
363 1vc4_A Indole-3-glycerol phosp 55.5 41 0.0014 33.4 8.8 92 118-238 65-161 (254)
364 4h1z_A Enolase Q92ZS5; dehydra 55.3 17 0.00059 38.3 6.4 113 98-242 229-344 (412)
365 2w6r_A Imidazole glycerol phos 54.6 31 0.0011 33.3 7.7 68 120-192 32-107 (266)
366 3sjn_A Mandelate racemase/muco 54.4 30 0.001 35.9 8.0 67 116-185 146-220 (374)
367 3qja_A IGPS, indole-3-glycerol 54.1 1E+02 0.0036 30.9 11.7 91 120-238 74-169 (272)
368 1eep_A Inosine 5'-monophosphat 53.5 37 0.0013 35.5 8.6 62 120-187 154-221 (404)
369 4h1z_A Enolase Q92ZS5; dehydra 53.1 59 0.002 34.3 10.1 86 98-186 169-259 (412)
370 2e28_A Pyruvate kinase, PK; al 52.9 20 0.00068 40.3 6.7 159 117-302 172-338 (587)
371 1dxe_A 2-dehydro-3-deoxy-galac 52.7 39 0.0013 33.4 8.1 140 124-300 84-254 (256)
372 2hxt_A L-fuconate dehydratase; 52.7 40 0.0014 35.7 8.7 68 115-185 197-268 (441)
373 1q6o_A Humps, 3-keto-L-gulonat 52.6 38 0.0013 32.2 7.8 97 108-234 6-109 (216)
374 3go2_A Putative L-alanine-DL-g 52.6 67 0.0023 33.8 10.4 69 114-185 141-239 (409)
375 1yxy_A Putative N-acetylmannos 52.5 24 0.00083 33.6 6.4 67 120-191 90-168 (234)
376 3can_A Pyruvate-formate lyase- 52.4 1.3E+02 0.0045 27.0 12.7 47 221-287 22-68 (182)
377 3fcp_A L-Ala-D/L-Glu epimerase 52.3 24 0.00083 36.7 6.9 84 98-184 129-218 (381)
378 1z41_A YQJM, probable NADH-dep 52.3 60 0.0021 33.2 9.7 99 211-312 137-249 (338)
379 1h5y_A HISF; histidine biosynt 51.9 28 0.00095 32.7 6.7 90 120-236 156-253 (253)
380 1izc_A Macrophomate synthase i 51.6 1.1E+02 0.0036 32.0 11.5 145 122-300 108-291 (339)
381 2pge_A MENC; OSBS, NYSGXRC, PS 51.4 25 0.00086 36.4 6.8 92 119-238 223-319 (377)
382 2z2u_A UPF0026 protein MJ0257; 51.2 46 0.0016 32.8 8.4 46 219-287 144-189 (311)
383 1tv8_A MOAA, molybdenum cofact 51.0 92 0.0031 31.1 10.7 49 220-287 83-133 (340)
384 2egz_A 3-dehydroquinate dehydr 50.9 28 0.00095 34.0 6.6 49 112-166 119-169 (219)
385 2xhf_A Peroxiredoxin 5; oxidor 50.8 38 0.0013 31.8 7.4 58 110-175 55-115 (171)
386 1toa_A Tromp-1, protein (perip 50.8 6.5 0.00022 40.3 2.2 140 98-252 55-215 (313)
387 2qjg_A Putative aldolase MJ040 50.7 48 0.0016 32.3 8.4 68 120-189 101-187 (273)
388 1vyr_A Pentaerythritol tetrani 50.6 42 0.0014 35.0 8.3 76 116-196 249-331 (364)
389 2y7e_A 3-keto-5-aminohexanoate 50.5 81 0.0028 32.3 10.2 211 116-362 32-262 (282)
390 3cyj_A Mandelate racemase/muco 50.5 58 0.002 33.6 9.3 95 116-238 200-298 (372)
391 3ffs_A Inosine-5-monophosphate 50.4 25 0.00084 37.7 6.7 67 119-187 193-274 (400)
392 1olt_A Oxygen-independent copr 50.4 70 0.0024 34.0 10.2 50 220-287 123-177 (457)
393 1tqj_A Ribulose-phosphate 3-ep 50.3 61 0.0021 31.4 9.0 152 106-311 8-178 (230)
394 7odc_A Protein (ornithine deca 50.1 76 0.0026 33.5 10.4 149 121-312 74-235 (424)
395 3l5l_A Xenobiotic reductase A; 50.0 33 0.0011 35.7 7.4 76 115-195 243-332 (363)
396 3c8f_A Pyruvate formate-lyase 49.9 84 0.0029 29.0 9.6 47 220-286 87-135 (245)
397 2opj_A O-succinylbenzoate-COA 49.6 24 0.00083 36.2 6.3 90 116-238 136-228 (327)
398 2dy3_A Alanine racemase; alpha 49.6 16 0.00054 37.3 4.9 70 231-312 116-197 (361)
399 3v5c_A Mandelate racemase/muco 49.5 48 0.0016 34.8 8.7 67 116-185 148-227 (392)
400 3tdn_A FLR symmetric alpha-bet 49.4 30 0.001 33.3 6.7 68 120-192 37-112 (247)
401 3gr7_A NADPH dehydrogenase; fl 49.3 36 0.0012 35.2 7.6 77 115-196 226-315 (340)
402 1vrd_A Inosine-5'-monophosphat 48.8 31 0.0011 37.0 7.2 66 120-187 288-368 (494)
403 2yyu_A Orotidine 5'-phosphate 48.8 1.1E+02 0.0039 29.8 10.7 141 108-280 7-163 (246)
404 1e0t_A Pyruvate kinase, PK; ph 48.5 24 0.00081 38.8 6.3 158 117-302 171-337 (470)
405 3qll_A Citrate lyase; beta bar 48.3 75 0.0026 32.7 9.7 139 115-279 111-256 (316)
406 1sgj_A Citrate lyase, beta sub 48.3 82 0.0028 31.4 9.8 134 120-280 83-222 (284)
407 2tps_A Protein (thiamin phosph 48.3 50 0.0017 30.9 7.8 61 120-187 33-100 (227)
408 2jbm_A Nicotinate-nucleotide p 48.2 24 0.00083 36.1 6.0 62 121-185 207-269 (299)
409 1r0m_A N-acylamino acid racema 48.2 33 0.0011 35.3 7.1 65 115-184 147-213 (375)
410 3dbi_A Sugar-binding transcrip 48.0 2E+02 0.007 27.9 14.3 129 147-307 81-214 (338)
411 3ddm_A Putative mandelate race 47.9 22 0.00077 37.3 5.8 66 117-185 156-225 (392)
412 2hjp_A Phosphonopyruvate hydro 47.9 43 0.0015 34.3 7.8 61 103-169 149-213 (290)
413 3qld_A Mandelate racemase/muco 47.6 34 0.0012 35.9 7.1 64 116-184 149-214 (388)
414 1ep3_A Dihydroorotate dehydrog 47.5 51 0.0017 32.5 8.1 82 101-187 98-195 (311)
415 2zc8_A N-acylamino acid racema 47.5 36 0.0012 34.9 7.2 66 115-185 140-207 (369)
416 3eoo_A Methylisocitrate lyase; 47.3 17 0.00059 37.5 4.7 59 103-168 155-214 (298)
417 4e4f_A Mannonate dehydratase; 47.2 39 0.0013 35.9 7.6 84 98-186 131-255 (426)
418 3ayv_A Putative uncharacterize 47.2 1.1E+02 0.0036 28.8 10.0 91 135-243 3-100 (254)
419 2plj_A Lysine/ornithine decarb 47.0 33 0.0011 36.1 6.9 150 120-311 90-252 (419)
420 2oo0_A ODC, ornithine decarbox 46.7 62 0.0021 34.8 9.2 147 124-312 87-245 (471)
421 4h83_A Mandelate racemase/muco 46.5 37 0.0013 35.5 7.2 67 116-185 164-235 (388)
422 3ru6_A Orotidine 5'-phosphate 46.2 1.1E+02 0.0037 31.7 10.5 138 112-280 31-178 (303)
423 1ka9_F Imidazole glycerol phos 46.2 42 0.0014 32.0 7.1 90 120-236 154-251 (252)
424 2b7n_A Probable nicotinate-nuc 46.1 28 0.00095 35.1 6.0 62 121-185 192-254 (273)
425 3b0p_A TRNA-dihydrouridine syn 46.1 78 0.0027 32.7 9.5 90 102-196 127-233 (350)
426 2c6q_A GMP reductase 2; TIM ba 46.0 1E+02 0.0035 32.0 10.4 98 120-234 119-226 (351)
427 1s2w_A Phosphoenolpyruvate pho 45.9 43 0.0015 34.4 7.4 59 102-166 152-214 (295)
428 3gwq_A D-serine deaminase; str 45.9 80 0.0027 33.5 9.7 150 120-314 83-252 (426)
429 3usb_A Inosine-5'-monophosphat 45.6 32 0.0011 37.6 6.7 66 120-187 307-387 (511)
430 1vqt_A Orotidine 5'-phosphate 45.4 6.3 0.00021 38.3 1.1 125 108-280 12-144 (213)
431 3t7v_A Methylornithine synthas 45.4 2.5E+02 0.0086 28.2 15.7 27 115-141 91-117 (350)
432 1xvl_A Mn transporter, MNTC pr 45.3 10 0.00036 39.0 2.8 139 97-252 61-222 (321)
433 4fxs_A Inosine-5'-monophosphat 45.2 29 0.001 37.8 6.4 66 120-187 282-362 (496)
434 1bd0_A Alanine racemase; isome 45.2 50 0.0017 34.3 7.9 102 125-272 52-155 (388)
435 1r3s_A URO-D, uroporphyrinogen 45.0 82 0.0028 32.4 9.5 48 118-165 197-259 (367)
436 1ypf_A GMP reductase; GUAC, pu 44.8 1.9E+02 0.0066 29.4 12.1 74 102-187 95-176 (336)
437 3gka_A N-ethylmaleimide reduct 44.8 27 0.00091 36.8 5.8 74 117-196 249-324 (361)
438 2q02_A Putative cytoplasmic pr 44.6 62 0.0021 30.5 7.9 113 220-346 53-169 (272)
439 2c6q_A GMP reductase 2; TIM ba 44.6 38 0.0013 35.2 6.9 64 120-185 171-249 (351)
440 3g1w_A Sugar ABC transporter; 44.6 2.1E+02 0.0072 27.1 12.3 136 145-310 20-162 (305)
441 3gnh_A L-lysine, L-arginine ca 44.5 1.9E+02 0.0065 28.6 11.8 27 113-139 162-188 (403)
442 3aty_A Tcoye, prostaglandin F2 44.4 26 0.00087 37.0 5.6 75 115-196 263-344 (379)
443 2qgh_A Diaminopimelate decarbo 44.1 2.3E+02 0.0077 29.6 12.8 38 122-172 72-109 (425)
444 2ozt_A TLR1174 protein; struct 43.7 37 0.0013 34.6 6.5 67 116-185 116-187 (332)
445 2fn9_A Ribose ABC transporter, 43.6 1.9E+02 0.0066 27.1 11.2 132 145-303 18-160 (290)
446 1ypf_A GMP reductase; GUAC, pu 43.6 19 0.00065 37.0 4.4 67 120-192 159-243 (336)
447 3vdg_A Probable glucarate dehy 43.3 48 0.0016 35.7 7.6 92 116-238 250-344 (445)
448 1jcn_A Inosine monophosphate d 43.3 33 0.0011 37.1 6.4 74 119-194 305-393 (514)
449 3m47_A Orotidine 5'-phosphate 43.1 82 0.0028 30.7 8.7 133 112-281 19-158 (228)
450 1eep_A Inosine 5'-monophosphat 43.1 37 0.0013 35.6 6.5 65 121-187 205-284 (404)
451 3n2b_A Diaminopimelate decarbo 43.0 74 0.0025 33.8 8.9 151 124-312 93-262 (441)
452 1vrd_A Inosine-5'-monophosphat 43.0 1.2E+02 0.0041 32.4 10.6 65 119-188 237-306 (494)
453 1q7z_A 5-methyltetrahydrofolat 42.6 1.5E+02 0.0053 32.9 11.7 143 119-295 127-285 (566)
454 3va8_A Probable dehydratase; e 42.5 45 0.0015 35.9 7.3 92 116-238 248-342 (445)
455 3btn_A Antizyme inhibitor 1; T 42.2 58 0.002 34.6 8.0 150 124-312 77-235 (448)
456 3o74_A Fructose transport syst 41.9 50 0.0017 30.7 6.6 152 106-279 33-211 (272)
457 4a3q_A Alanine racemase 1; iso 41.7 40 0.0014 35.5 6.6 104 124-272 51-157 (382)
458 4dye_A Isomerase; enolase fami 41.6 61 0.0021 34.2 8.0 65 116-184 168-237 (398)
459 1xg4_A Probable methylisocitra 41.6 27 0.00091 35.9 5.1 61 102-169 150-211 (295)
460 1xla_A D-xylose isomerase; iso 41.4 73 0.0025 32.9 8.4 63 215-281 113-179 (394)
461 3l5a_A NADH/flavin oxidoreduct 41.4 1.3E+02 0.0044 32.2 10.5 212 90-312 30-285 (419)
462 4ab4_A Xenobiotic reductase B; 41.3 32 0.0011 36.2 5.7 74 117-196 241-316 (362)
463 3fst_A 5,10-methylenetetrahydr 41.2 34 0.0012 35.2 5.8 55 113-169 158-212 (304)
464 3lye_A Oxaloacetate acetyl hyd 41.2 27 0.00092 36.2 5.1 47 115-167 175-221 (307)
465 3kw3_A Alanine racemase; niaid 41.1 44 0.0015 35.1 6.8 93 123-257 62-157 (376)
466 2p3z_A L-rhamnonate dehydratas 41.0 47 0.0016 35.3 7.1 93 116-236 234-330 (415)
467 1eix_A Orotidine 5'-monophosph 41.0 69 0.0024 31.4 7.8 166 109-319 18-197 (245)
468 3tkf_A Transaldolase; structur 40.6 58 0.002 34.4 7.5 81 213-308 97-181 (345)
469 3apt_A Methylenetetrahydrofola 40.4 26 0.0009 35.9 4.8 54 114-169 156-209 (310)
470 3va8_A Probable dehydratase; e 40.4 1.1E+02 0.0038 32.8 9.9 66 115-184 190-261 (445)
471 4ab4_A Xenobiotic reductase B; 40.4 1.3E+02 0.0044 31.5 10.2 98 211-311 146-261 (362)
472 3ih1_A Methylisocitrate lyase; 40.3 31 0.001 35.8 5.3 59 103-168 159-218 (305)
473 1zfj_A Inosine monophosphate d 40.3 1.5E+02 0.0052 31.4 10.9 101 118-234 232-339 (491)
474 3tr2_A Orotidine 5'-phosphate 40.2 1.1E+02 0.0038 30.2 9.2 138 113-280 16-164 (239)
475 1j93_A UROD, uroporphyrinogen 40.0 74 0.0025 32.3 8.1 51 118-171 193-253 (353)
476 2gjl_A Hypothetical protein PA 39.9 2E+02 0.0069 28.9 11.2 75 102-188 68-145 (328)
477 3anu_A D-serine dehydratase; P 39.9 50 0.0017 33.7 6.8 148 124-314 53-222 (376)
478 2fvy_A D-galactose-binding per 39.7 2.5E+02 0.0084 26.5 13.7 138 145-309 18-175 (309)
479 3tb6_A Arabinose metabolism tr 39.7 2.4E+02 0.0082 26.3 13.0 99 182-308 72-170 (298)
480 3s1x_A Probable transaldolase; 39.6 77 0.0026 31.5 7.8 69 103-181 56-124 (223)
481 3ekg_A Mandelate racemase/muco 39.4 1.3E+02 0.0044 32.0 10.1 109 98-235 207-318 (404)
482 3ceu_A Thiamine phosphate pyro 39.4 38 0.0013 32.1 5.5 63 121-189 16-78 (210)
483 2o7s_A DHQ-SDH PR, bifunctiona 39.4 3.7E+02 0.013 29.0 13.9 159 115-316 14-185 (523)
484 3r8r_A Transaldolase; pentose 39.4 99 0.0034 30.5 8.5 71 103-183 54-125 (212)
485 1f76_A Dihydroorotate dehydrog 39.2 1.7E+02 0.0057 29.5 10.6 86 99-190 209-320 (336)
486 2yx0_A Radical SAM enzyme; pre 39.2 1.7E+02 0.0057 29.4 10.5 48 220-287 159-208 (342)
487 2fli_A Ribulose-phosphate 3-ep 39.0 1.2E+02 0.0042 28.2 8.9 105 106-243 7-121 (220)
488 2a5h_A L-lysine 2,3-aminomutas 39.0 75 0.0026 33.6 8.2 71 219-305 180-253 (416)
489 3r2g_A Inosine 5'-monophosphat 39.0 30 0.001 36.6 5.1 63 120-188 151-228 (361)
490 3hjz_A Transaldolase B; parach 38.9 62 0.0021 34.1 7.4 79 213-306 74-156 (334)
491 1qwg_A PSL synthase;, (2R)-pho 38.8 32 0.0011 35.0 5.0 120 160-318 13-136 (251)
492 1o94_A Tmadh, trimethylamine d 38.5 4.4E+02 0.015 29.5 14.8 211 90-312 12-259 (729)
493 3ujp_A Mn transporter subunit; 38.4 23 0.00079 36.3 4.0 140 98-252 48-208 (307)
494 4hty_A Cellulase; (alpha/beta) 38.4 78 0.0027 32.3 8.0 50 121-172 88-145 (359)
495 3vc5_A Mandelate racemase/muco 38.2 57 0.0019 35.0 7.2 68 144-238 269-339 (441)
496 3fxg_A Rhamnonate dehydratase; 38.1 78 0.0027 34.4 8.3 91 116-234 228-322 (455)
497 3bw2_A 2-nitropropane dioxygen 38.0 63 0.0021 33.3 7.3 68 120-192 154-241 (369)
498 1twi_A Diaminopimelate decarbo 38.0 1.9E+02 0.0065 30.1 11.0 25 220-244 189-215 (434)
499 3bo9_A Putative nitroalkan dio 37.9 1.6E+02 0.0053 30.0 10.1 78 102-193 78-156 (326)
500 1wue_A Mandelate racemase/muco 37.8 41 0.0014 34.9 5.9 57 159-237 250-309 (386)
No 1
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=100.00 E-value=1.9e-116 Score=930.17 Aligned_cols=322 Identities=34% Similarity=0.531 Sum_probs=295.4
Q ss_pred cccCCCceeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCC
Q 006566 82 KTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYN 161 (640)
Q Consensus 82 ~~~Rr~Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~ 161 (640)
++.||+||+|+||+|+|||+|||+|||||||+|.|+++||+||++|++|||||||+|||++++|++|++|+++|++.|++
T Consensus 2 ~~~Rr~Tr~V~VG~v~IGG~~PI~VQSMtnT~T~Dv~aTv~QI~~L~~aG~eiVRvaVp~~~~A~al~~I~~~l~~~~~~ 81 (406)
T 4g9p_A 2 EGMRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVE 81 (406)
T ss_dssp CCCCCCCCCEEETTEEESTTSCCEEEEECCSCTTCHHHHHHHHHHHHHHTCSEEEEECCSHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCccCeeEEEcCEeeCCCCceeeeecCCCCcccHHHHHHHHHHHHHcCCCEEEEecCCHHHHHhHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeccCCCHHHHHHH----hhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 162 IPLVADIHFAPSVALRV----AECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 162 iPLVADIHF~~~~Al~A----a~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
+||||||||||++|+.| ++.++||||||||||+++++ +++|.++|++||++|+|||||
T Consensus 82 vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~~k~------------------~e~~~~vv~~ak~~~~pIRIG 143 (406)
T 4g9p_A 82 VPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRGRHK------------------DEHFAEMIRIAMDLGKPVRIG 143 (406)
T ss_dssp CCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCSTHHH------------------HHHHHHHHHHHHHHTCCEEEE
T ss_pred CceEeeecccHHHHHHHHHHHHhHHhhcccCccccCccccH------------------HHHHHHHHHHHHHccCCceec
Confidence 99999999999999964 34599999999999987653 578999999999999999999
Q ss_pred eCCCCCcHhHHHHhCC------C--------hHHHHHHHHHHHHHHHHCCC--CcEEEEEEeCChhhHHHHHHHHHHHHH
Q 006566 238 TNHGSLSDRIMSYYGD------S--------PRGMVESAFEFARICRKLDF--HNFLFSMKASNPVVMVQAYRLLVAEMY 301 (640)
Q Consensus 238 vNhGSLs~ril~ryGd------t--------p~gMVeSAle~~~i~e~~~F--~diviSmKsSn~~~mV~AyRlL~~~m~ 301 (640)
||||||++++|++||| + +++||||||+|+++|+++|| +||+|||||||+++||+|||+|+++
T Consensus 144 VN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~~~iviS~KaSdv~~~i~aYr~la~~-- 221 (406)
T 4g9p_A 144 ANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLVLSAKVSKARDLVWVYRELARR-- 221 (406)
T ss_dssp EEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEECSSHHHHHHHHHHHHHH--
T ss_pred cccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCChhheEEEeecCCHHHHHHHHHHHHHh--
Confidence 9999999999999975 2 38999999999999999888 7899999999999999999999999
Q ss_pred HcCCCcceEEEeecCCCCCcceeehHHHHHHHhhhcCCcEEEeecCCCCch----hhHHHHHHHh-hccc----------
Q 006566 302 VHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEK----EIDPCRRLAN-LGMR---------- 366 (640)
Q Consensus 302 ~~g~dyPLHLGVTEAG~gedGrIKSAiGIG~LL~DGIGDTIRVSLTedP~~----Ei~va~~ILq-~~~R---------- 366 (640)
+||||||||||||++++|+||||+|||+||.||||||||||||+||++ ||+||++||| +++|
T Consensus 222 ---~dyPLHLGvTEAG~~~~G~IKSaigiG~LL~~GIGDTIRVSLT~dP~e~~~~EV~va~~ILqslglR~~~~~iiSCP 298 (406)
T 4g9p_A 222 ---TQAPLHLGLTEAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTPSPKEPRTKEVEVAQEILQALGLRAFAPEVTSCP 298 (406)
T ss_dssp ---CCSCBEECCTTCBSHHHHHHHHHHHHHHHHHTTCCSEEECCBCCCTTSCTTHHHHHHHHHHHHTTSCCCSCEEEECC
T ss_pred ---CCCCceeeeecCCCcccceechHHHHHHHHhccCchhEEeeccCCCCcccHHHHHHHHHHHHHhCCcccCCCcccCC
Confidence 999999999999999999999999999999999999999999999985 9999999999 8888
Q ss_pred Ccccc-cCchh-h----HHhhc-----------ccccccccccccccccCCc--ccccccc-----------cccCCeEe
Q 006566 367 AAELQ-QGVAP-F----EEKHR-----------HYFDFQRRSGQLPIQKEGE--EVDYRGV-----------LHRDGSVL 416 (640)
Q Consensus 367 ~CGRt-~dl~~-~----~~~i~-----------~l~~~~~~vmgciVNGpGE--~AD~g~V-----------~~~~GkVv 416 (640)
+|||| ||+.. + ++.++ +.++++.++|||+|||||| +||||+. +|.+|+++
T Consensus 299 tCGRt~~d~~~~la~~v~~~l~~~~~~~~~~~~~~~~l~VAVMGCvVNGPGEa~~ADiGi~~~G~G~~~~~~lf~~G~~~ 378 (406)
T 4g9p_A 299 GCGRTTSTFFQELAEEVSRRLKERLPEWRARYPGVEELKVAVMGCVVNGPGESKHAHIGISLPGAGEEPKAPVYADGKLL 378 (406)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGCEEEEESSTTTHHHHHHHSSEEEECCCTTSCSEEEEEETTEEE
T ss_pred CCCcCcchHHHHHHHHHHHHHhhhhhhhhhccCCCCCCEEEEECCcccCcchhhhcCcCcccCCCCCCCeeeEEECCEEE
Confidence 39996 77432 2 11121 1346788999999999999 5999864 57899999
Q ss_pred eecccccccc
Q 006566 417 MSVSLDQLKA 426 (640)
Q Consensus 417 ~~v~~~~l~~ 426 (640)
.+++.+++.+
T Consensus 379 ~~v~~~~iv~ 388 (406)
T 4g9p_A 379 TILKGEGIAE 388 (406)
T ss_dssp EEEESSCHHH
T ss_pred EecCHHHHHH
Confidence 9999988764
No 2
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=100.00 E-value=3.7e-113 Score=894.14 Aligned_cols=312 Identities=36% Similarity=0.571 Sum_probs=294.7
Q ss_pred ccCCCceeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCc
Q 006566 83 TVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNI 162 (640)
Q Consensus 83 ~~Rr~Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~i 162 (640)
.+||+||+|+||+|+|||++||+|||||||+|.|+++|++||++|++|||||||+|+|++++|++|++||++ +++
T Consensus 11 ~~rr~tr~v~VG~v~IGG~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRvavp~~~~a~al~~I~~~-----~~v 85 (366)
T 3noy_A 11 IQKRKTRQIRVGNVKIGGDAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAVPHKEDVEALEEIVKK-----SPM 85 (366)
T ss_dssp CCCCCCCCEEETTEEESTTSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHH-----CSS
T ss_pred eeeccceEEEECCEEEcCCCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHhc-----CCC
Confidence 579999999999999999999999999999999999999999999999999999999999999999999996 899
Q ss_pred ceeeccCCCHHHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCC
Q 006566 163 PLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241 (640)
Q Consensus 163 PLVADIHF~~~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhG 241 (640)
||||||||||++|++|+++ +||+|||||||++++ +|+++|++||++|+|||||||||
T Consensus 86 PlvaDiHf~~~lal~a~e~G~dklRINPGNig~~~----------------------~~~~vv~~ak~~~~piRIGvN~G 143 (366)
T 3noy_A 86 PVIADIHFAPSYAFLSMEKGVHGIRINPGNIGKEE----------------------IVREIVEEAKRRGVAVRIGVNSG 143 (366)
T ss_dssp CEEEECCSCHHHHHHHHHTTCSEEEECHHHHSCHH----------------------HHHHHHHHHHHHTCEEEEEEEGG
T ss_pred CEEEeCCCCHHHHHHHHHhCCCeEEECCcccCchh----------------------HHHHHHHHHHHcCCCEEEecCCc
Confidence 9999999999999999999 999999999999854 38999999999999999999999
Q ss_pred CCcHhHHHHhC-CChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCC
Q 006566 242 SLSDRIMSYYG-DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE 320 (640)
Q Consensus 242 SLs~ril~ryG-dtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~ge 320 (640)
||++++++||| +||++|||||++++++||++||+||+||+||||++.||+|||+|+++ ++|||||||||||+++
T Consensus 144 SL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S~v~~~i~ayr~la~~-----~dyPLHlGvTEAG~~~ 218 (366)
T 3noy_A 144 SLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSIKGSDVLQNVRANLIFAER-----TDVPLHIGITEAGMGT 218 (366)
T ss_dssp GCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSHHHHHHHHHHHHHH-----CCCCEEECCSSCCSHH
T ss_pred CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEeeecCChHHHHHHHHHHHhc-----cCCCEEEccCCCCCCc
Confidence 99999999999 79999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred cceeehHHHHHHHhhhcCCcEEEeecCCCCchhhHHHHHHHh-hccc----------Ccccc-cCchhhHHhhc----cc
Q 006566 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN-LGMR----------AAELQ-QGVAPFEEKHR----HY 384 (640)
Q Consensus 321 dGrIKSAiGIG~LL~DGIGDTIRVSLTedP~~Ei~va~~ILq-~~~R----------~CGRt-~dl~~~~~~i~----~l 384 (640)
+|+||||+|||+||.||||||||||||++|++||++|++||| +++| +|||| ||++++.++++ ++
T Consensus 219 ~G~ikSsigiG~LL~dGIGDTIRVSLt~~p~~Ev~va~~ILqslglR~~g~~~ISCPtCGRt~~dl~~~~~~ie~~l~~~ 298 (366)
T 3noy_A 219 KGIIKSSVGIGILLYMGIGDTVRVSLTDDPVVEVETAYEILKSLGLRRRGVEIVACPTCGRIEVDLPKVVKEVQEKLSGV 298 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCCSEECCCCSSCHHHHHHHHHHHHHHTTSCCSSCEEEECCCCTTCCSCHHHHHHHHHHHTTTC
T ss_pred ceeeehHHHHHHHHHhcccceEEEeCCCCcHHHHHHHHHHHHhcCCCcCCCEEEECCCCCCccccHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999 8888 39997 99887766654 45
Q ss_pred c-cccccccccccccCCc--ccccccc-------cccCCeEeeecccccccc
Q 006566 385 F-DFQRRSGQLPIQKEGE--EVDYRGV-------LHRDGSVLMSVSLDQLKA 426 (640)
Q Consensus 385 ~-~~~~~vmgciVNGpGE--~AD~g~V-------~~~~GkVv~~v~~~~l~~ 426 (640)
+ +++.++|||+|||||| +||||++ +|.+|+++.+++.+++.+
T Consensus 299 ~~~lkVAVMGCvVNGPGEa~~ADiGiagg~~~~~lf~~Ge~v~~v~~~~~~~ 350 (366)
T 3noy_A 299 KTPLKVAVMGCVVNAIGEAREADIGLACGRGFAWLFKHGKPIKKVDESEMVD 350 (366)
T ss_dssp CSCCEEEEESSSHHHHHHTTTCSEEEEECSSEEEEEETTEEEEEEESCHHHH
T ss_pred CCCCEEEEEcccccCCchhhhCCEeEecCCCceEEEECCEEeeecCHHHHHH
Confidence 4 6778999999999999 5999754 577888888888877654
No 3
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=99.39 E-value=4.6e-12 Score=128.21 Aligned_cols=189 Identities=15% Similarity=0.145 Sum_probs=147.2
Q ss_pred CceeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC------------HHHHHHHHHHHHH
Q 006566 87 KTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG------------KREADACFEIKNS 154 (640)
Q Consensus 87 ~Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~------------~~~A~~l~~I~~~ 154 (640)
++++|.||++.||++ |+.|+.+ +...|.+.+.+.+.++.++||++||+.+.. .+..+.|++++++
T Consensus 9 ~~~~i~i~~~~iG~~-~~vIAgp--c~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~ 85 (262)
T 1zco_A 9 EKTVVKINDVKFGEG-FTIIAGP--CSIESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADE 85 (262)
T ss_dssp SCCCEEETTEEETSS-CEEEEEC--SBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH
T ss_pred CCceEEECCEEECCC-cEEEEeC--CCCCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHH
Confidence 778899999999999 9999999 567789999999999999999999999865 5666666666664
Q ss_pred hhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 155 LVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 155 L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
..+|+++|+|....+ ..+++.++.+.|.++|+.+ .++++.+-+.|.||
T Consensus 86 -----~Gl~~~te~~d~~~~-~~l~~~vd~~kIga~~~~n--------------------------~~ll~~~a~~~kPV 133 (262)
T 1zco_A 86 -----YGLVTVTEVMDTRHV-ELVAKYSDILQIGARNSQN--------------------------FELLKEVGKVENPV 133 (262)
T ss_dssp -----HTCEEEEECCCGGGH-HHHHHHCSEEEECGGGTTC--------------------------HHHHHHHTTSSSCE
T ss_pred -----cCCcEEEeeCCHHhH-HHHHhhCCEEEECcccccC--------------------------HHHHHHHHhcCCcE
Confidence 779999999988774 4555779999999999987 23556666699999
Q ss_pred EEeeCCCCCcHhHHHHhC-C-ChHHHHHHHHHHHHHHHHCCCCcEEEEE-------EeCChhhHHHHHHHHHHHHHHcCC
Q 006566 235 RIGTNHGSLSDRIMSYYG-D-SPRGMVESAFEFARICRKLDFHNFLFSM-------KASNPVVMVQAYRLLVAEMYVHGW 305 (640)
Q Consensus 235 RIGvNhGSLs~ril~ryG-d-tp~gMVeSAle~~~i~e~~~F~diviSm-------KsSn~~~mV~AyRlL~~~m~~~g~ 305 (640)
.+ +.| . |++.|.+++ ++++..|-.++.+-- +.++..+.+.+...|.+. +
T Consensus 134 ~l-------------k~G~~~t~~e~~~Av----~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~-----~ 191 (262)
T 1zco_A 134 LL-------------KRGMGNTIQELLYSA----EYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKEL-----S 191 (262)
T ss_dssp EE-------------ECCTTCCHHHHHHHH----HHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHH-----B
T ss_pred EE-------------ecCCCCCHHHHHHHH----HHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhh-----h
Confidence 87 336 3 677777666 567888888887755 222333456777877776 7
Q ss_pred CcceEEEeecCCCCCc---ceeehHHHHHH
Q 006566 306 DYPLHLGVTEAGEGED---GRMKSAIGIGT 332 (640)
Q Consensus 306 dyPLHLGVTEAG~ged---GrIKSAiGIG~ 332 (640)
++|+|...|.++...+ ...++|+++|+
T Consensus 192 ~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga 221 (262)
T 1zco_A 192 HLPIIVDPSHPAGRRSLVIPLAKAAYAIGA 221 (262)
T ss_dssp SSCEEECSSTTTCSGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEcCCCCCccchHHHHHHHHHHcCC
Confidence 8999999999987666 55666666553
No 4
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=98.63 E-value=5.3e-07 Score=96.02 Aligned_cols=190 Identities=15% Similarity=0.220 Sum_probs=136.2
Q ss_pred eeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEec------------CCHHHHHHHHHHHHHhh
Q 006566 89 RTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV------------QGKREADACFEIKNSLV 156 (640)
Q Consensus 89 r~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtv------------p~~~~A~~l~~I~~~L~ 156 (640)
..|.||++.||+++|+.|.-++... |.+.+.+.+.++.++||++||+.+ ++.+..+.|.+++++
T Consensus 129 t~i~i~~~~iG~~~~~~Iigpcsve--s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~-- 204 (385)
T 3nvt_A 129 TIVTVKGLPIGNGEPVFVFGPCSVE--SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDE-- 204 (385)
T ss_dssp CCEEETTEEETSSSCEEEEECSBCC--CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH--
T ss_pred cEEEECCEEECCCCeEEEEEeCCcC--CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHH--
Confidence 4699999999999999999999887 999999999999999999999987 567777778877775
Q ss_pred cCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEE
Q 006566 157 QKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (640)
Q Consensus 157 ~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRI 236 (640)
..+|+++|+|....+...+ +.++-+.|..+|+.+ .++++.+.+.|.||-+
T Consensus 205 ---~Gl~~~te~~d~~~~~~l~-~~vd~lkIgs~~~~n--------------------------~~LL~~~a~~gkPVil 254 (385)
T 3nvt_A 205 ---YGLGVISEIVTPADIEVAL-DYVDVIQIGARNMQN--------------------------FELLKAAGRVDKPILL 254 (385)
T ss_dssp ---HTCEEEEECCSGGGHHHHT-TTCSEEEECGGGTTC--------------------------HHHHHHHHTSSSCEEE
T ss_pred ---cCCEEEEecCCHHHHHHHH-hhCCEEEECcccccC--------------------------HHHHHHHHccCCcEEE
Confidence 8899999999887777664 779999999999976 2688999999999977
Q ss_pred eeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEE-eCC----hh--hHHHHHHHHHHHHHHcCCCcce
Q 006566 237 GTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMK-ASN----PV--VMVQAYRLLVAEMYVHGWDYPL 309 (640)
Q Consensus 237 GvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmK-sSn----~~--~mV~AyRlL~~~m~~~g~dyPL 309 (640)
-+.-. .|++.| +.|.| .+++.|=.++++-=- .|. +. +-+.+...|-+. .++|+
T Consensus 255 k~G~~-----------~t~~e~-~~Ave---~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~-----~~lpV 314 (385)
T 3nvt_A 255 KRGLS-----------ATIEEF-IGAAE---YIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKE-----THLPV 314 (385)
T ss_dssp ECCTT-----------CCHHHH-HHHHH---HHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHH-----BSSCE
T ss_pred ecCCC-----------CCHHHH-HHHHH---HHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHh-----cCCCE
Confidence 66330 244444 33334 356778777766443 332 11 123333344444 57888
Q ss_pred EEEeecCCCCCcc---eeehHHHHHH
Q 006566 310 HLGVTEAGEGEDG---RMKSAIGIGT 332 (640)
Q Consensus 310 HLGVTEAG~gedG---rIKSAiGIG~ 332 (640)
-..-|-++.-.+- .-+.|+.+|+
T Consensus 315 ~~D~th~~G~r~~v~~~a~AAvA~GA 340 (385)
T 3nvt_A 315 MVDVTHSTGRKDLLLPCAKAALAIEA 340 (385)
T ss_dssp EEEHHHHHCCGGGHHHHHHHHHHTTC
T ss_pred EEcCCCCCCccchHHHHHHHHHHhCC
Confidence 4445654222221 2244666664
No 5
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=98.28 E-value=8.9e-07 Score=93.62 Aligned_cols=90 Identities=19% Similarity=0.273 Sum_probs=68.7
Q ss_pred CceEEEeecCCCCCCCchhHHHHHHHHHHHHCCCCCCEEEEeccCCCCCccchHHHHHHhhhhhhhccccceeeecCCCC
Q 006566 538 DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ 617 (640)
Q Consensus 538 ~~~v~il~~~~~~~~~~~v~~~R~l~~~L~~~g~~~PVi~~~~y~~~~~~~~~~l~aa~d~GaLL~DGlGDGi~l~~~~~ 617 (640)
+.+++.++ .|+-..-+.++|.|..+ .++|+ |.-.++.-...+-.+++|+.+|+||+|||||+|++.-...
T Consensus 178 ~~iviS~K---~S~v~~~i~ayr~la~~-----~dyPL--HlGvTEAG~~~~G~ikSsigiG~LL~dGIGDTIRVSLt~~ 247 (366)
T 3noy_A 178 TNYKVSIK---GSDVLQNVRANLIFAER-----TDVPL--HIGITEAGMGTKGIIKSSVGIGILLYMGIGDTVRVSLTDD 247 (366)
T ss_dssp CCEEEEEE---CSSHHHHHHHHHHHHHH-----CCCCE--EECCSSCCSHHHHHHHHHHHHHHHHHTTCCSEECCCCSSC
T ss_pred CeEEEeee---cCChHHHHHHHHHHHhc-----cCCCE--EEccCCCCCCcceeeehHHHHHHHHHhcccceEEEeCCCC
Confidence 66788888 55555667777776655 68996 3445554344567999999999999999999999987644
Q ss_pred Chhhhhhhhhhhhhhcccccc
Q 006566 618 DFDFLRDTSFNLLQGVCLMSI 638 (640)
Q Consensus 618 ~~~~~~~~aF~ILQaaR~r~~ 638 (640)
+.+.+ .++|+|||+.|+|..
T Consensus 248 p~~Ev-~va~~ILqslglR~~ 267 (366)
T 3noy_A 248 PVVEV-ETAYEILKSLGLRRR 267 (366)
T ss_dssp HHHHH-HHHHHHHHHTTSCCS
T ss_pred cHHHH-HHHHHHHHhcCCCcC
Confidence 45555 789999999999974
No 6
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=97.69 E-value=0.0026 Score=65.70 Aligned_cols=208 Identities=16% Similarity=0.256 Sum_probs=133.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC----------HHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG----------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~----------~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~ 183 (640)
.|.++.+++++++.++|++|+=|-..+ .+|.+.+..+.+.|++. +++||.-|- |+|.+|.+|+++ ++
T Consensus 60 ~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~-~~vpiSIDT-~~~~V~~aAl~aGa~ 137 (297)
T 1tx2_A 60 NEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKE-VKLPISIDT-YKAEVAKQAIEAGAH 137 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHH-SCSCEEEEC-SCHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhc-CCceEEEeC-CCHHHHHHHHHcCCC
Confidence 479999999999999999999998754 55555444444555542 589999998 699999999998 44
Q ss_pred ceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHH
Q 006566 184 KIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAF 263 (640)
Q Consensus 184 KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAl 263 (640)
= ||-=|-.... .++++.|+++|.++=+--+.|-- + |.|..+.+.+...
T Consensus 138 i--INdvsg~~~d------------------------~~m~~~aa~~g~~vVlmh~~G~p-~-----y~d~v~ev~~~l~ 185 (297)
T 1tx2_A 138 I--INDIWGAKAE------------------------PKIAEVAAHYDVPIILMHNRDNM-N-----YRNLMADMIADLY 185 (297)
T ss_dssp E--EEETTTTSSC------------------------THHHHHHHHHTCCEEEECCCSCC-C-----CSSHHHHHHHHHH
T ss_pred E--EEECCCCCCC------------------------HHHHHHHHHhCCcEEEEeCCCCC-C-----cchHHHHHHHHHH
Confidence 3 4543332211 23677889999999666565532 2 8888889999999
Q ss_pred HHHHHHHHCCCC--cEEEEEEeCChhhHHHHHHHHH--HHHHHcCCCcceEEEeecC-------CCCCcceeehHHHHHH
Q 006566 264 EFARICRKLDFH--NFLFSMKASNPVVMVQAYRLLV--AEMYVHGWDYPLHLGVTEA-------GEGEDGRMKSAIGIGT 332 (640)
Q Consensus 264 e~~~i~e~~~F~--diviSmKsSn~~~mV~AyRlL~--~~m~~~g~dyPLHLGVTEA-------G~gedGrIKSAiGIG~ 332 (640)
+.++.|++.|+. +|+|--=---....-+.+.+|- .++.+ +.||+=+|+.-- |...+.|+-.++..-+
T Consensus 186 ~~i~~a~~~GI~~~~IilDPg~Gfgk~~~~n~~ll~~l~~l~~--lg~Pvl~G~Srksfig~~~g~~~~~r~~~t~a~~~ 263 (297)
T 1tx2_A 186 DSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNV--LGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVC 263 (297)
T ss_dssp HHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGG--GCSCBEEECTTCHHHHHHHTCCGGGCHHHHHHHHH
T ss_pred HHHHHHHHcCCChhcEEEeCCCCcCCCHHHHHHHHHHHHHHHh--CCCCEEEEeccchhhhhhcCCCHHHhHHHHHHHHH
Confidence 999999999998 8998631100011223333322 12222 579999999621 2223445544444433
Q ss_pred HhhhcCCcEEEeecCCCCchhhHHHHHHHh
Q 006566 333 LLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362 (640)
Q Consensus 333 LL~DGIGDTIRVSLTedP~~Ei~va~~ILq 362 (640)
+...-=.+-|||. | +.|..-|..+.+
T Consensus 264 ~a~~~ga~Ivrvh---d-V~e~~~a~~~~~ 289 (297)
T 1tx2_A 264 LGIEKGCEFVRVH---D-VKEMSRMAKMMD 289 (297)
T ss_dssp HHHHTTCSEEEES---C-HHHHHHHHHHHH
T ss_pred HHHHCCCcEEEeC---C-HHHHHHHHHHHH
Confidence 3333225777762 2 455554444444
No 7
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=97.64 E-value=0.0029 Score=64.77 Aligned_cols=168 Identities=14% Similarity=0.151 Sum_probs=111.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec----CC------HHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITV----QG------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtv----p~------~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~ 183 (640)
.|.++.+++++++.++|++|+=|-. |+ .+|.+.+..+.+.|++. ++||.-|- |+|.+|..|+++ ++
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT-~~~~va~aAl~aGa~ 102 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDT-MRADVARAALQNGAQ 102 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEEC-SCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeC-CCHHHHHHHHHcCCC
Confidence 5899999999999999999999987 44 56666666666667665 89999997 889999999998 43
Q ss_pred cee-eCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHH---HhCCChHHHH
Q 006566 184 KIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS---YYGDSPRGMV 259 (640)
Q Consensus 184 KVR-INPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~---ryGdtp~gMV 259 (640)
=|= |+-+|. +. .+++.|+++|.++=+-.+.|- ++.+-. .|.|--..+.
T Consensus 103 iINdvsg~~~-d~--------------------------~m~~~~a~~~~~vVlmh~~G~-p~tm~~~~~~y~dv~~~v~ 154 (280)
T 1eye_A 103 MVNDVSGGRA-DP--------------------------AMGPLLAEADVPWVLMHWRAV-SADTPHVPVRYGNVVAEVR 154 (280)
T ss_dssp EEEETTTTSS-CT--------------------------THHHHHHHHTCCEEEECCCCS-CTTCTTSCCCCSSHHHHHH
T ss_pred EEEECCCCCC-CH--------------------------HHHHHHHHhCCeEEEEcCCCC-CcchhhcCcchhHHHHHHH
Confidence 332 333332 21 256788999999866555553 332221 3655556778
Q ss_pred HHHHHHHHHHHHCCCC--cEEEEEEeCChhhHHHHHHHHH--HHHHHcCCCcceEEEeec
Q 006566 260 ESAFEFARICRKLDFH--NFLFSMKASNPVVMVQAYRLLV--AEMYVHGWDYPLHLGVTE 315 (640)
Q Consensus 260 eSAle~~~i~e~~~F~--diviSmKsSn~~~mV~AyRlL~--~~m~~~g~dyPLHLGVTE 315 (640)
+...+-++.|++.|+. +|+|--=---....-+.+.+|. +++.+ ..||+=+|+.-
T Consensus 155 ~~l~~~i~~a~~~Gi~~~~IilDPg~Gf~k~~~~n~~ll~~l~~~~~--~g~Pvl~G~Sr 212 (280)
T 1eye_A 155 ADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVA--TGIPVLVGASR 212 (280)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHHT--TSSCBEECCTT
T ss_pred HHHHHHHHHHHHcCCChhhEEEECCCCcccCHHHHHHHHHHHHHhhc--CCCCEEEEecc
Confidence 8899999999999998 8988531100011223333322 12222 67999999855
No 8
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=97.53 E-value=0.0061 Score=62.04 Aligned_cols=209 Identities=14% Similarity=0.089 Sum_probs=138.6
Q ss_pred eeecCCCCceEEEeccCCCC---------CCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHHhhcCCCCcc
Q 006566 95 NVAIGSEHPIRVQTMTTNDT---------KDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIP 163 (640)
Q Consensus 95 ~v~IGG~~PI~VQSMt~t~T---------~Dv~atv~Qi~rl~~aGceiVRvtvp~--~~~A~~l~~I~~~L~~~g~~iP 163 (640)
=++.|...|+.|===.|... .|.+..+++++++.++|++|+=|-..+ .+|.+.+..+.+.|++. +++|
T Consensus 2 ~~~~~~~~~~iigEilN~Tpdsf~dg~~~~~~~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~-~~~p 80 (271)
T 2yci_X 2 LVPRGSHMFIMIGERINGMFKDIREAILNKDPRPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEV-VDLP 80 (271)
T ss_dssp CSCSCCCCCEEEEEEEETTSHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHH-CCCC
T ss_pred CCCCCCCCCEEEEEecCCChhhHHHhhhhCCHHHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHh-CCCe
Confidence 35667777766643344332 489999999999999999999998755 35677777666666653 6899
Q ss_pred eeeccCCCHHHHHHHhhhcCcee-eCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCC
Q 006566 164 LVADIHFAPSVALRVAECFDKIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (640)
Q Consensus 164 LVADIHF~~~~Al~Aa~~v~KVR-INPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGS 242 (640)
|.-|- |+|.++.+|+++++..- ||--|-.. +++..++..|+++|.++=+-.+
T Consensus 81 isIDT-~~~~v~~aal~a~~Ga~iINdvs~~~-----------------------d~~~~~~~~~a~~~~~vv~m~~--- 133 (271)
T 2yci_X 81 CCLDS-TNPDAIEAGLKVHRGHAMINSTSADQ-----------------------WKMDIFFPMAKKYEAAIIGLTM--- 133 (271)
T ss_dssp EEEEC-SCHHHHHHHHHHCCSCCEEEEECSCH-----------------------HHHHHHHHHHHHHTCEEEEESC---
T ss_pred EEEeC-CCHHHHHHHHHhCCCCCEEEECCCCc-----------------------cccHHHHHHHHHcCCCEEEEec---
Confidence 99997 59999999999964322 55433321 2367788999999999833221
Q ss_pred CcHhHHHHhC--CChHHHHHHHHHHHHHHHHCCCC--cEEEEEE----eCChh---hHHHHHHHHHHHHHHcC-CCcceE
Q 006566 243 LSDRIMSYYG--DSPRGMVESAFEFARICRKLDFH--NFLFSMK----ASNPV---VMVQAYRLLVAEMYVHG-WDYPLH 310 (640)
Q Consensus 243 Ls~ril~ryG--dtp~gMVeSAle~~~i~e~~~F~--diviSmK----sSn~~---~mV~AyRlL~~~m~~~g-~dyPLH 310 (640)
+++ | .|.+..++.+.+-++.|++.|+. +|++--= +.+.. .+++.++.|.+ .+ -.||+-
T Consensus 134 -d~~-----G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~~~~l~~l~~~~~----~~~p~~p~l 203 (271)
T 2yci_X 134 -NEK-----GVPKDANDRSQLAMELVANADAHGIPMTELYIDPLILPVNVAQEHAVEVLETIRQIKL----MANPAPRTV 203 (271)
T ss_dssp -BTT-----BCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHHHHHHHHHHHHTT----SSSSCCEEE
T ss_pred -CCC-----CCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCccccCHHHHHHHHHHHHHHHH----hCCCCCCEE
Confidence 111 3 25788999999999999999997 5887532 22221 23444444422 22 259999
Q ss_pred EEeecC--CCCCcceeehHHHHHHHhhhcCCcEE
Q 006566 311 LGVTEA--GEGEDGRMKSAIGIGTLLQDGLGDTI 342 (640)
Q Consensus 311 LGVTEA--G~gedGrIKSAiGIG~LL~DGIGDTI 342 (640)
+|+.-- |.....++ .++-....+.-|+|=-|
T Consensus 204 ~G~Snksfg~~~r~~l-~~t~~~~a~~~g~~~~i 236 (271)
T 2yci_X 204 LGLSNVSQKCPDRPLI-NRTYLVMAMTAGLDAAI 236 (271)
T ss_dssp EEGGGGGTTCSSHHHH-HHHHHHHHHHHTCCEEE
T ss_pred EeeCccccCCchHHHH-HHHHHHHHHHHhCCcEE
Confidence 998443 33233444 34455566677775443
No 9
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=97.52 E-value=0.0023 Score=69.55 Aligned_cols=213 Identities=13% Similarity=0.136 Sum_probs=137.8
Q ss_pred ccccccCCCceeEEEc----eeecCCC-----------CceEEEeccCCCCCC---HHHHHHHHHHHH------HcCCCE
Q 006566 79 SIHKTVRRKTRTVMVG----NVAIGSE-----------HPIRVQTMTTNDTKD---VAGTVEEVMRIA------DQGADL 134 (640)
Q Consensus 79 s~~~~~Rr~Tr~V~VG----~v~IGG~-----------~PI~VQSMt~t~T~D---v~atv~Qi~rl~------~aGcei 134 (640)
.+-....-+-|+|.|| .++|||+ ||-+| -|.-+|+++ +++-++.+..+. ..|+|+
T Consensus 52 ~la~~lappI~~V~iG~G~~~v~iGGEtvL~rhE~tf~n~p~i-a~~V~D~~~e~~~~~~~~~~~~~~~~rvg~~~~~D~ 130 (446)
T 4djd_C 52 ALDAAAAPPIAKVVLGAGPTAVEMGDETELFRHDKRFYHETAI-AIQVSDNLSSEELKAKVEAINGLNFDRVGQHYTIQA 130 (446)
T ss_dssp HHHHTTSCSSCEEEESSTTSCEEEECCCCSSGGGSCCCSCCEE-EEEEETTSCHHHHHHHHHHHTTCCEEETTEEECCCE
T ss_pred HHHhhccCCceeEEecCCcEEEEECCeeeEEeCCcCCCCCCeE-EEEEeCCCChHHHHHHHHHHHHHHHHHHHHhccCcE
Confidence 4444555567889998 4888985 44333 344455555 445555554332 458999
Q ss_pred EEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCcee--eCCCCCCchhhhccccccchHHHHHH
Q 006566 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIR--VNPGNFADRRAQFEQLEYTDDEYQKE 212 (640)
Q Consensus 135 VRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVR--INPGN~~d~~k~F~~~eYtdeeY~~E 212 (640)
|-|---|-+- +.+..+.+.+.+ .+++||+=|- +||.++.+|++.+...| ||.-+-
T Consensus 131 ial~~~s~dp-e~~~~vVk~V~e-~~dvPL~IDS-~dpevleaALea~a~~~plI~sat~-------------------- 187 (446)
T 4djd_C 131 IAIRHDADDP-AAFKAAVASVAA-ATQLNLVLMA-DDPDVLKEALAGVADRKPLLYAATG-------------------- 187 (446)
T ss_dssp EEEECCSSST-HHHHHHHHHHHT-TCCSEEEEEC-SCHHHHHHHHGGGGGGCCEEEEECT--------------------
T ss_pred EEEEeCCCCH-HHHHHHHHHHHH-hCCCCEEEec-CCHHHHHHHHHhhcCcCCeeEecch--------------------
Confidence 8776654433 334444444443 6999999997 99999999999864433 666441
Q ss_pred HhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhh----
Q 006566 213 LQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVV---- 288 (640)
Q Consensus 213 le~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~---- 288 (640)
++++.+...|+++|.++ .+-| + +++.+.+.++++.++|++||++-==......
T Consensus 188 -----dn~e~m~~lAa~y~~pV--i~~~--------------~--dl~~lkelv~~a~~~GI~~IvLDPG~~g~~~t~~~ 244 (446)
T 4djd_C 188 -----ANYEAMTALAKENNCPL--AVYG--------------N--GLEELAELVDKIVALGHKQLVLDPGARETSRAIAD 244 (446)
T ss_dssp -----TTHHHHHHHHHHTTCCE--EEEC--------------S--SHHHHHHHHHHHHHTTCCCEEEECCCCSHHHHHHH
T ss_pred -----hhHHHHHHHHHHcCCcE--EEEe--------------c--cHHHHHHHHHHHHHCCCCcEEECCCchhHHHHHHH
Confidence 23778899999999999 4422 1 6788889999999999999998654433332
Q ss_pred HHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHHHHHHHhhhcCCcEEEee
Q 006566 289 MVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVS 345 (640)
Q Consensus 289 mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAiGIG~LL~DGIGDTIRVS 345 (640)
|++. |+++=+-.-..+.||+-+|+.. .|-+...++. +.+.--=+|-+||+
T Consensus 245 ~~~i-Rr~AL~~~d~~LgyPvi~~~sr----~d~~~E~t~A--~~~i~kga~Iv~vh 294 (446)
T 4djd_C 245 FTQI-RRLAIKKRFRSFGYPIIALTTA----ANPLDEVLQA--VNYVTKYASLVVLR 294 (446)
T ss_dssp HHHH-HHHHHHSCCGGGCSCBEEECCC----SSHHHHHHHH--HHHHHTTCSEEEES
T ss_pred HHHH-HHHhhhccCcccCCCEEeccCC----ccHHHHHHHH--HHHHHcCCeEEEEc
Confidence 3333 4443221112346999999976 4566655555 55555558888887
No 10
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=97.49 E-value=0.0048 Score=64.40 Aligned_cols=198 Identities=17% Similarity=0.200 Sum_probs=112.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec----CC-----HHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cC
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITV----QG-----KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtv----p~-----~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~ 183 (640)
..|.++.+++++++.++|++|+=|-. |+ .+|.+.+..+.+.|++.-.++||.-|- |+|.+|.+|+++ ++
T Consensus 61 ~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT-~~~~VaeaAl~aGa~ 139 (318)
T 2vp8_A 61 TFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDT-WRAQVAKAACAAGAD 139 (318)
T ss_dssp ---CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEEC-SCHHHHHHHHHHTCC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeC-CCHHHHHHHHHhCCC
Confidence 35789999999999999999999975 45 555555544455555532279999986 899999999998 55
Q ss_pred cee-eCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHH--HhCCCh----H
Q 006566 184 KIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS--YYGDSP----R 256 (640)
Q Consensus 184 KVR-INPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~--ryGdtp----~ 256 (640)
=|= |+-+| +. .+++.|+++|.++=+=-+.|-.++.+-. .|.+++ .
T Consensus 140 iINDVsg~~--d~--------------------------~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ 191 (318)
T 2vp8_A 140 LINDTWGGV--DP--------------------------AMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVD 191 (318)
T ss_dssp EEEETTSSS--ST--------------------------THHHHHHHHTCEEEEECC-------------CCSCHHHHHH
T ss_pred EEEECCCCC--ch--------------------------HHHHHHHHhCCCEEEECCCCCCccccccccccccccccHHH
Confidence 332 33443 21 2567889999998554443432332211 353333 3
Q ss_pred HHHHHHHHHHHHHHHCCCC--cEEEE-----EEeCChhhHHHHHHHHHHHHHHcCCCcceEEEeecC-------CCCCcc
Q 006566 257 GMVESAFEFARICRKLDFH--NFLFS-----MKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEA-------GEGEDG 322 (640)
Q Consensus 257 gMVeSAle~~~i~e~~~F~--diviS-----mKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEA-------G~gedG 322 (640)
.+.+...+-++.|++.|+. +|+|- .| +.....+..|.+. ++. .+.||+=+|+.-= |...+.
T Consensus 192 ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~K--t~~~nl~ll~~l~-~l~--~lg~PvL~G~SrKsfig~~~g~~~~~ 266 (318)
T 2vp8_A 192 AVISQVTAAAERAVAAGVAREKVLIDPAHDFGK--NTFHGLLLLRHVA-DLV--MTGWPVLMALSNKDVVGETLGVDLTE 266 (318)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCT--TSHHHHHHHHTHH-HHH--TTSSCBEECCC---------------
T ss_pred HHHHHHHHHHHHHHHcCCChhhEEEcCCCCccc--CHHHHHHHHHHHH-HHH--hCCCCEEEEeCcchhhhhhcCCChHH
Confidence 4456666778899999997 88874 23 2222233333332 222 2579999998632 222334
Q ss_pred eeehHHHHHHHhhhcCCcEEEee
Q 006566 323 RMKSAIGIGTLLQDGLGDTIRVS 345 (640)
Q Consensus 323 rIKSAiGIG~LL~DGIGDTIRVS 345 (640)
|+-.++.+-++....=.+-|||.
T Consensus 267 r~~~t~a~~~~a~~~Ga~IvRvH 289 (318)
T 2vp8_A 267 RLEGTLAATALAAAAGARMFRVH 289 (318)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEES
T ss_pred hHHHHHHHHHHHHHCCCeEEEcC
Confidence 55444444444333335677764
No 11
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=97.38 E-value=0.0043 Score=67.45 Aligned_cols=205 Identities=14% Similarity=0.162 Sum_probs=130.0
Q ss_pred CceeEEEc----eeecCCCC-----------ceEEEeccCCCCCCHHHHHHHHHH-----HHHcC----CCEEEEecCCH
Q 006566 87 KTRTVMVG----NVAIGSEH-----------PIRVQTMTTNDTKDVAGTVEEVMR-----IADQG----ADLVRITVQGK 142 (640)
Q Consensus 87 ~Tr~V~VG----~v~IGG~~-----------PI~VQSMt~t~T~Dv~atv~Qi~r-----l~~aG----ceiVRvtvp~~ 142 (640)
+.+++.+| .+.+||+. |-+|=- .=.|+++-+.-.+.++. -...| +|+|-+-. ..
T Consensus 60 ~ikeV~IG~Gek~vkiGge~vl~~~E~~~~np~~ia~-eI~D~~~~~~~~~~~~~~~~~~~~~~g~~~~aD~I~l~~-~~ 137 (445)
T 2h9a_A 60 PVALIKVGKGEKVLEIGHETVLFRHDKRFEHPCGLAI-LVEDTLSEGEIKERVEKINKLVFDRVGQMHSVNLVALKG-SS 137 (445)
T ss_dssp CSCCEEESCTTSCEEECCCCCSSGGGSCCCSCCEEEE-EEETTSCHHHHHHHHHHHHTCEEEETTEEEECCEEEEEC-TT
T ss_pred cccccccCCCceeeEeCCcceEEecccccCCCCeEEE-EEecCCChHhHHHHHHHhhhHHHHhhcccccCcEEEEeC-CC
Confidence 44667788 78899986 665532 22335554444444443 22356 99988876 22
Q ss_pred HHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-c-CceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhH
Q 006566 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-F-DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVF 220 (640)
Q Consensus 143 ~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v-~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f 220 (640)
.+.+.++.+.+.+++ -+++||+-| +||+++.+|++. . .|.=||.=+- +++
T Consensus 138 ~dpe~~~~~Vk~V~e-~~dvPlsID--~dp~vleaale~~~d~~pLIns~t~-------------------------en~ 189 (445)
T 2h9a_A 138 QDAATFAKAVATARE-VTDLPFILI--GTPEQLAAALETEGANNPLLYAATA-------------------------DNY 189 (445)
T ss_dssp CCHHHHHHHHHHHHH-HCCSCEEEE--SCHHHHHHHHHHHGGGCCEEEEECT-------------------------TTH
T ss_pred CCHHHHHHHHHHHHH-hcCCCEEEE--CCHHHHHHHHHhcCCCCCEEEECCH-------------------------HHH
Confidence 333444444333332 379999999 999999999999 4 2333554221 126
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHH
Q 006566 221 SPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300 (640)
Q Consensus 221 ~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m 300 (640)
..+...|+++|.++= + ++.| ++.+.+-++.++++|+.+|++.-=..+....++.++++-..-
T Consensus 190 ~~~~~la~~y~~~vV--~----~~~~------------l~~l~~lv~~a~~~Gi~~IiLDP~~~~~~~sl~~~~~IR~~a 251 (445)
T 2h9a_A 190 EQMVELAKKYNVPLT--V----SAKG------------LDALAELVQKITALGYKNLILDPQPENISEGLFYQTQIRRLA 251 (445)
T ss_dssp HHHHHHHHHHTCCEE--E----ECSS------------HHHHHHHHHHHHHTTCCCEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCeEE--E----EcCC------------HHHHHHHHHHHHHCCCCcEEEcCCchhHHHHHHHHHHHHHhh
Confidence 678899999999983 3 2211 677999999999999999998744445566666666665442
Q ss_pred -HHcC--CCcceEEEeecCCCCCcceeehHHHHHHHhhhcCCcEEEee
Q 006566 301 -YVHG--WDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVS 345 (640)
Q Consensus 301 -~~~g--~dyPLHLGVTEAG~gedGrIKSAiGIG~LL~DGIGDTIRVS 345 (640)
.+.. +-||+-.++||- |-++ -++--+.++.-| +|-+|++
T Consensus 252 l~~~d~~lg~P~i~~vs~~----d~~~-ea~lA~~~~~~G-asIl~~~ 293 (445)
T 2h9a_A 252 IKKLFRPFGYPTIAFALDE----NPYQ-AVMEASVYIAKY-AGIIVLN 293 (445)
T ss_dssp HHSCCGGGCSCBEEECCCS----SHHH-HHHHHHHHHHTT-CSEEEEC
T ss_pred hcCCCcccCCCeeecCCch----hHHH-HHHHHHHHHHcC-CeEEEec
Confidence 2222 459999999998 4443 333333334444 5777764
No 12
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=97.37 E-value=0.0073 Score=62.79 Aligned_cols=181 Identities=16% Similarity=0.258 Sum_probs=119.5
Q ss_pred CceeEEEc----eeecCCCC--ce-----------E----EEeccCCC--------CCCH-HHHHHHHHHHHHcCCCEEE
Q 006566 87 KTRTVMVG----NVAIGSEH--PI-----------R----VQTMTTND--------TKDV-AGTVEEVMRIADQGADLVR 136 (640)
Q Consensus 87 ~Tr~V~VG----~v~IGG~~--PI-----------~----VQSMt~t~--------T~Dv-~atv~Qi~rl~~aGceiVR 136 (640)
+-|+|.|| .++|||+. |. + |--+|.-+ ..|+ +..+++.+++.+.|+|||=
T Consensus 13 ~i~~v~iG~g~~~~~~GGe~~~~~~~~e~~~~~~p~i~m~I~n~tpdsf~d~i~~~~~~~~~~~~~~A~~~v~~GAdiID 92 (310)
T 2h9a_B 13 KVVEVTLGTGDKTVTLGGDSTLPFLTFEGEMPNPPRFALEVFDTPPTDWPDILVEPFKDVINDPVAWAKKCVEYGADIVA 92 (310)
T ss_dssp CCCEEEESCGGGCEEEECCSSSTTCTTSSCCCSCCEEEEEEESSCCSSCCHHHHGGGTTTTTCHHHHHHHHHHTTCSEEE
T ss_pred cceEEEECCCceEEEECCCccccceecCcCCCCCCeEEEEEeeCCCcccchhhhhhhccHHHHHHHHHHHHHHcCCcEEE
Confidence 34789998 48899987 41 1 11112111 1334 6788999999999999999
Q ss_pred Eec----CC------HHHHHHHHHHHHHhhcCCCCcceee-cc---CCCHHHHHHHhhh-cC-ceeeCCCCCCchhhhcc
Q 006566 137 ITV----QG------KREADACFEIKNSLVQKNYNIPLVA-DI---HFAPSVALRVAEC-FD-KIRVNPGNFADRRAQFE 200 (640)
Q Consensus 137 vtv----p~------~~~A~~l~~I~~~L~~~g~~iPLVA-DI---HF~~~~Al~Aa~~-v~-KVRINPGN~~d~~k~F~ 200 (640)
|-. |+ .++.+.++.|++. +++||+- |- -++|.++.+|+++ .+ |-=||.=+-.
T Consensus 93 Ig~~StrP~~~~vs~eee~~vV~~v~~~-----~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~------- 160 (310)
T 2h9a_B 93 LRLVSAHPDGQNRSGAELAEVCKAVADA-----IDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKD------- 160 (310)
T ss_dssp EECGGGCTTTTCCCHHHHHHHHHHHHHH-----CSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTT-------
T ss_pred EeCccCCCCCCCCCHHHHHHHHHHHHHh-----CCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCC-------
Confidence 976 43 2345566666663 7899999 87 5999999999999 44 3335532221
Q ss_pred ccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCC--CcEE
Q 006566 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDF--HNFL 278 (640)
Q Consensus 201 ~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F--~div 278 (640)
++..+...|+++|.++=+-.+. | ++.+.+-++.|++.|+ ++|+
T Consensus 161 ------------------~~~~~~~~aa~~g~~vv~m~~~------------d-----v~~l~~~~~~a~~~Gi~~e~Ii 205 (310)
T 2h9a_B 161 ------------------NYKPIVATCMVHGHSVVASAPL------------D-----INLSKQLNIMIMEMNLAPNRII 205 (310)
T ss_dssp ------------------THHHHHHHHHHHTCEEEEECSS------------C-----HHHHHHHHHHHHTTTCCGGGEE
T ss_pred ------------------ccHHHHHHHHHhCCCEEEEChh------------H-----HHHHHHHHHHHHHCCCChhhEE
Confidence 1456788999999998443211 1 4788889999999999 7898
Q ss_pred EEEE----eCChhhHHHHHHHHHHH-HH-HcCCCcceEEEee
Q 006566 279 FSMK----ASNPVVMVQAYRLLVAE-MY-VHGWDYPLHLGVT 314 (640)
Q Consensus 279 iSmK----sSn~~~mV~AyRlL~~~-m~-~~g~dyPLHLGVT 314 (640)
+--= +++....++.+.++... |. -..+.||+-+|++
T Consensus 206 lDPg~g~~g~~~e~~~~~l~~ir~~al~~~~~lg~P~l~g~S 247 (310)
T 2h9a_B 206 MDPLIGALGYGIEYSYSIIERMRLGALTGDKILAMPVVCFIG 247 (310)
T ss_dssp EECCCCCTTTTHHHHHHHHHHHHHHHHTTCGGGCSCBEECHH
T ss_pred EeCCCccccCchHhHHHHHHHHHHhhhhhhhcCCCCEEEEcc
Confidence 8533 22222333445554441 22 1224699999996
No 13
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.23 E-value=0.0053 Score=63.53 Aligned_cols=191 Identities=16% Similarity=0.194 Sum_probs=125.9
Q ss_pred eeecCCCCceEEEe-ccCCC----------CCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhc--CC
Q 006566 95 NVAIGSEHPIRVQT-MTTND----------TKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQ--KN 159 (640)
Q Consensus 95 ~v~IGG~~PI~VQS-Mt~t~----------T~Dv~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~--~g 159 (640)
+++||.++|..+=- =+|.. ..|.+..+++.+++.++|++|+=|-.. ...+.+.+..+...+.+ +.
T Consensus 3 ~~~~~~~~~~~iIGEriNvTg~~sf~~~~~~~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~ 82 (300)
T 3k13_A 3 ALEVKPEINFVNIGERCNVAGSRKFLRLVNEKKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEI 82 (300)
T ss_dssp ------CTTCEEEEEEEETTTCHHHHHHHHTTCHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHH
T ss_pred ceeeCCCCCcEEEEEeccCCCCHHHHHHHhcCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhc
Confidence 35667766555433 23333 268999999999999999999998643 23455566666555543 23
Q ss_pred CCcceeeccCCCHHHHHHHhhhc-CceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 160 YNIPLVADIHFAPSVALRVAECF-DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 160 ~~iPLVADIHF~~~~Al~Aa~~v-~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.++||.-|- ++|.++..|++++ -+-=||-=|....+ ++|..++..|+++|.++=+-.
T Consensus 83 ~~vpisIDT-~~~~V~eaaL~~~~Ga~iINdIs~~~~d---------------------~~~~~~~~l~a~~ga~vV~mh 140 (300)
T 3k13_A 83 ARVPVMIDS-SKWEVIEAGLKCLQGKSIVNSISLKEGE---------------------EVFLEHARIIKQYGAATVVMA 140 (300)
T ss_dssp HTSCEEEEC-SCHHHHHHHHHHCSSCCEEEEECSTTCH---------------------HHHHHHHHHHHHHTCEEEEES
T ss_pred CCCeEEEeC-CCHHHHHHHHHhcCCCCEEEeCCcccCC---------------------hhHHHHHHHHHHhCCeEEEEe
Confidence 689999998 8999999999974 33336654443222 247788999999999984443
Q ss_pred CCCCCcHhHHHHhC--CChHHHHHHHHHHHHHH-HHCCC--CcEEEE-----EEeC-C-----hhhHHHHHHHHHHHHHH
Q 006566 239 NHGSLSDRIMSYYG--DSPRGMVESAFEFARIC-RKLDF--HNFLFS-----MKAS-N-----PVVMVQAYRLLVAEMYV 302 (640)
Q Consensus 239 NhGSLs~ril~ryG--dtp~gMVeSAle~~~i~-e~~~F--~diviS-----mKsS-n-----~~~mV~AyRlL~~~m~~ 302 (640)
+- ++ | .|.+.-++-|.+..+.| ++.|+ .+|+|- ...+ . -..++++.|.|.+.
T Consensus 141 ~d----~~-----G~p~t~~~~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~gk~~~~~~~~~~~~l~~l~~lk~~--- 208 (300)
T 3k13_A 141 FD----EK-----GQADTAARKIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIRKN--- 208 (300)
T ss_dssp EE----TT-----EECCSHHHHHHHHHHHHHHHHHHTCCCGGGEEEECCCCCCSSSCGGGTTHHHHHHHHHHHHHHH---
T ss_pred eC----CC-----CCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccCCChHHhhHHHHHHHHHHHHHHHh---
Confidence 21 11 2 25556677888888887 99999 688863 2112 1 23467788887766
Q ss_pred cCC-CcceEEEeecCCCCCc
Q 006566 303 HGW-DYPLHLGVTEAGEGED 321 (640)
Q Consensus 303 ~g~-dyPLHLGVTEAG~ged 321 (640)
+ .||+-+|+.-=..|.+
T Consensus 209 --lPg~pvl~G~SnkSfglp 226 (300)
T 3k13_A 209 --LPGAHVSGGVSNLSFSFR 226 (300)
T ss_dssp --STTCEECCBGGGGGGGGT
T ss_pred --CCCCCEEEEECcccccCC
Confidence 6 7999999976655555
No 14
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=97.21 E-value=0.0062 Score=62.45 Aligned_cols=166 Identities=17% Similarity=0.268 Sum_probs=115.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec----CC------HHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-c
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITV----QG------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-F 182 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtv----p~------~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v 182 (640)
..|.++.+++++++.++|++|+=|-. |+ .+|.+.+..+.+.|++. +++||.-|- |+|.+|..|+++ +
T Consensus 34 ~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~-~~~piSIDT-~~~~va~aAl~aGa 111 (282)
T 1aj0_A 34 HNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQR-FEVWISVDT-SKPEVIRESAKVGA 111 (282)
T ss_dssp CTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHH-CCCEEEEEC-CCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhh-cCCeEEEeC-CCHHHHHHHHHcCC
Confidence 35799999999999999999999987 55 78888877777777654 489999997 789999999998 4
Q ss_pred CceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHH--HHhCCChHHHHH
Q 006566 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM--SYYGDSPRGMVE 260 (640)
Q Consensus 183 ~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril--~ryGdtp~gMVe 260 (640)
+= ||--+-.. ...+++.|+++|.++=+=-+.|- ++.+- ..|.|--..+.+
T Consensus 112 ~i--INdvsg~~-------------------------d~~~~~~~a~~~~~vVlmh~~G~-p~tm~~~~~y~d~~~ev~~ 163 (282)
T 1aj0_A 112 HI--INDIRSLS-------------------------EPGALEAAAETGLPVCLMHMQGN-PKTMQEAPKYDDVFAEVNR 163 (282)
T ss_dssp CE--EEETTTTC-------------------------STTHHHHHHHHTCCEEEECCSSC-TTCCSCCCCCSCHHHHHHH
T ss_pred CE--EEECCCCC-------------------------CHHHHHHHHHhCCeEEEEccCCC-CccccccCccchHHHHHHH
Confidence 33 45433221 12357788999999855444442 22111 136555567899
Q ss_pred HHHHHHHHHHHCCCC--cEEEEEE---eCChhhHHHHHHHHH--HHHHHcCCCcceEEEee
Q 006566 261 SAFEFARICRKLDFH--NFLFSMK---ASNPVVMVQAYRLLV--AEMYVHGWDYPLHLGVT 314 (640)
Q Consensus 261 SAle~~~i~e~~~F~--diviSmK---sSn~~~mV~AyRlL~--~~m~~~g~dyPLHLGVT 314 (640)
...+-++.|++.|+. +|+|--= +.+. -+.+.+|- +++.+ ..||+=+|+.
T Consensus 164 ~l~~~i~~a~~~Gi~~~~IilDPg~gf~k~~---~~n~~ll~~l~~~~~--~g~P~l~G~S 219 (282)
T 1aj0_A 164 YFIEQIARCEQAGIAKEKLLLDPGFGFGKNL---SHNYSLLARLAEFHH--FNLPLLVGMS 219 (282)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEECCTTSSCCH---HHHHHHHHTGGGGGG--GCSCBEECCT
T ss_pred HHHHHHHHHHHcCCChhhEEEeCCCCcccCH---HHHHHHHHHHHHHhc--CCCCEEEEEC
Confidence 999999999999998 8998621 1122 23333332 12222 5799999986
No 15
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=97.20 E-value=0.009 Score=61.66 Aligned_cols=193 Identities=20% Similarity=0.255 Sum_probs=129.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec----CC------HHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITV----QG------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtv----p~------~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~ 183 (640)
.|.++.+++.+++.++||+|+=|-. |+ .+|.+.+..+.+.|++. ++||.-|- |+|.+|.+|+++ ++
T Consensus 43 ~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~--~vpiSIDT-~~~~Va~aAl~aGa~ 119 (294)
T 2y5s_A 43 LARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDT-YKPAVMRAALAAGAD 119 (294)
T ss_dssp -CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG--CSCEEEEC-CCHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC--CCeEEEEC-CCHHHHHHHHHcCCC
Confidence 5889999999999999999999987 55 67777776667777765 89999986 899999999998 43
Q ss_pred cee-eCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhH---HHHhCCChHHHH
Q 006566 184 KIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI---MSYYGDSPRGMV 259 (640)
Q Consensus 184 KVR-INPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ri---l~ryGdtp~gMV 259 (640)
=|= |+-+| +. .+++.|+++|.++=+--+.|- ++.+ ...|.|--+.++
T Consensus 120 iINdVsg~~--d~--------------------------~m~~~~a~~~~~vVlmh~~G~-p~tm~~~~~~y~dv~~ev~ 170 (294)
T 2y5s_A 120 LINDIWGFR--QP--------------------------GAIDAVRDGNSGLCAMHMLGE-PQTMQVGEPDYGDVVTDVR 170 (294)
T ss_dssp EEEETTTTC--ST--------------------------THHHHHSSSSCEEEEECCCEE-TTTTEECCCCCSSHHHHHH
T ss_pred EEEECCCCC--ch--------------------------HHHHHHHHhCCCEEEECCCCC-CccccccCCccccHHHHHH
Confidence 332 44444 21 256788999999855444342 2221 124655447789
Q ss_pred HHHHHHHHHHHHCCCC--cEEEEE-----EeCChhhHHHHHHHHHHHHHH------cCCCcceEEEeec------C-CCC
Q 006566 260 ESAFEFARICRKLDFH--NFLFSM-----KASNPVVMVQAYRLLVAEMYV------HGWDYPLHLGVTE------A-GEG 319 (640)
Q Consensus 260 eSAle~~~i~e~~~F~--diviSm-----KsSn~~~mV~AyRlL~~~m~~------~g~dyPLHLGVTE------A-G~g 319 (640)
+.+.+-++.|++.|+. +|+|-- |+.. -+.+.+| +.+.+ +...||+=+|+.- . |..
T Consensus 171 ~~l~~~i~~a~~~Gi~~~~IilDPG~Gf~kt~~----~~n~~ll-~~l~~l~~~~~~~~g~Pvl~G~Srksfig~l~g~~ 245 (294)
T 2y5s_A 171 DFLAARAQALRDAGVAAERICVDPGFGFGKAVV----DDNYALL-AALPDTAPARPDGRAYPILAGMSRKSMLGAVIGGK 245 (294)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEECCTTSSSCTT----HHHHHHH-HTGGGGSCBCTTSSBCCBEEECTTCHHHHTTTTSC
T ss_pred HHHHHHHHHHHHcCCChhhEEEeCCCcccccch----HHHHHHH-HHHHHHHhccccCCCCCEEEEecccHHhhhhcCCC
Confidence 9999999999999998 898852 2220 2233332 22222 2467999999854 2 222
Q ss_pred Cc-ceee-hHHHHHHHhhhcCCcEEEee
Q 006566 320 ED-GRMK-SAIGIGTLLQDGLGDTIRVS 345 (640)
Q Consensus 320 ed-GrIK-SAiGIG~LL~DGIGDTIRVS 345 (640)
.. .|.- +++-....+..| .+-|||.
T Consensus 246 ~~~~R~~~t~a~~~~a~~~G-a~IvrvH 272 (294)
T 2y5s_A 246 PPLERVAASVAAALCAVERG-AAIVRVH 272 (294)
T ss_dssp CGGGCHHHHHHHHHHHHHTT-CSEEEES
T ss_pred chhhhhHHHHHHHHHHHHcC-CcEEEcC
Confidence 22 3433 444455556666 6778875
No 16
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=97.12 E-value=0.0078 Score=62.19 Aligned_cols=165 Identities=15% Similarity=0.142 Sum_probs=109.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC----------HHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG----------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~----------~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~ 183 (640)
.|.++.+++.+++.++||+|+=|-..+ .+|.+.+..+.+.|++. ++||.-|- |+|.+|.+|+++ ++
T Consensus 49 ~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~--~vpiSIDT-~~~~Va~aAl~aGa~ 125 (294)
T 2dqw_A 49 LDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL--GVPVSVDT-RKPEVAEEALKLGAH 125 (294)
T ss_dssp ----CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT--CSCEEEEC-SCHHHHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEEC-CCHHHHHHHHHhCCC
Confidence 478999999999999999999998743 56666666666677765 89999986 899999999998 44
Q ss_pred ceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCC-CCCcHhH--HHHhCCChHHHHH
Q 006566 184 KIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH-GSLSDRI--MSYYGDSPRGMVE 260 (640)
Q Consensus 184 KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNh-GSLs~ri--l~ryGdtp~gMVe 260 (640)
= ||==+-.. ...+++.|+++|.++=+--+. | .++.+ ...|.|--+.+++
T Consensus 126 i--INdVsg~~-------------------------d~~m~~v~a~~~~~vVlmh~~eG-~p~tm~~~~~y~dv~~ev~~ 177 (294)
T 2dqw_A 126 L--LNDVTGLR-------------------------DERMVALAARHGVAAVVMHMPVP-DPATMMAHARYRDVVAEVKA 177 (294)
T ss_dssp E--EECSSCSC-------------------------CHHHHHHHHHHTCEEEEECCSSS-CTTTGGGGCCCSSHHHHHHH
T ss_pred E--EEECCCCC-------------------------ChHHHHHHHHhCCCEEEEcCCCC-CCccccccCccccHHHHHHH
Confidence 2 34211110 124678889999998554443 3 22221 1236554477899
Q ss_pred HHHHHHHHHHHCCCCcEEEEEE---eCChhhHHHHHHHHH--HHHHHcCCCcceEEEeec
Q 006566 261 SAFEFARICRKLDFHNFLFSMK---ASNPVVMVQAYRLLV--AEMYVHGWDYPLHLGVTE 315 (640)
Q Consensus 261 SAle~~~i~e~~~F~diviSmK---sSn~~~mV~AyRlL~--~~m~~~g~dyPLHLGVTE 315 (640)
.+.+-++.|++.|+.+|+|--= +.+. -+.+.+|- +++.+ ..||+=+|+.-
T Consensus 178 ~l~~~i~~a~~~Gi~~IilDPG~Gf~kt~---~~n~~ll~~l~~~~~--~g~Pvl~G~Sr 232 (294)
T 2dqw_A 178 FLEAQARRALSAGVPQVVLDPGFGFGKLL---EHNLALLRRLDEIVA--LGHPVLVGLSR 232 (294)
T ss_dssp HHHHHHHHHHHTTCSCEEEECCTTSSCCH---HHHHHHHHTHHHHHT--TSSCBEECCTT
T ss_pred HHHHHHHHHHHCCCCcEEEcCCCCcccCH---HHHHHHHHHHHHHhc--CCCCEEEEecc
Confidence 9999999999999999998631 1111 23333322 22222 67999999865
No 17
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=97.09 E-value=0.013 Score=59.22 Aligned_cols=192 Identities=13% Similarity=0.078 Sum_probs=125.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec--CCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCc-eeeCCCC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITV--QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDK-IRVNPGN 191 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtv--p~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~K-VRINPGN 191 (640)
.|.+..+++++++.++|++|+=|-. +...+.+.+..+.+.+.+ -.++||.-|- |+|.+|..|++++.. -=||--|
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~-~~~~pisIDT-~~~~v~~aAl~a~~Ga~iINdvs 99 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQE-VSNLTLCLDS-TNIKAIEAGLKKCKNRAMINSTN 99 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHT-TCCSEEEEEC-SCHHHHHHHHHHCSSCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHH-hCCCeEEEeC-CCHHHHHHHHhhCCCCCEEEECC
Confidence 5889999999999999999999985 334567777777776665 3689999997 699999999998643 3366433
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC--CCCCcHhHHHHhCCChHHHHHHHHHHHHHH
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN--HGSLSDRIMSYYGDSPRGMVESAFEFARIC 269 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN--hGSLs~ril~ryGdtp~gMVeSAle~~~i~ 269 (640)
-.. + .+..+++.|+++|.++=+=.+ .| .+ .|.+..++.+.+.++.|
T Consensus 100 ~~~-d----------------------~~~~~~~~~a~~~~~vvlmh~~~~G-~p--------~t~~~~~~~~~~~~~~a 147 (262)
T 1f6y_A 100 AER-E----------------------KVEKLFPLAVEHGAALIGLTMNKTG-IP--------KDSDTRLAFAMELVAAA 147 (262)
T ss_dssp SCH-H----------------------HHHHHHHHHHHTTCEEEEESCCSSC-SC--------SSHHHHHHHHHHHHHHH
T ss_pred CCc-c----------------------cHHHHHHHHHHhCCcEEEEcCCCCC-CC--------CCHHHHHHHHHHHHHHH
Confidence 321 1 366788999999999833332 11 11 25567788899999999
Q ss_pred HHCCCC--cEEEEE----EeCCh---hhHHHHHHHHHHHHHHcCCCcceEEEeecCCCC--CcceeehHHHHHHHhhhcC
Q 006566 270 RKLDFH--NFLFSM----KASNP---VVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG--EDGRMKSAIGIGTLLQDGL 338 (640)
Q Consensus 270 e~~~F~--diviSm----KsSn~---~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~g--edGrIKSAiGIG~LL~DGI 338 (640)
++.|+. +|++-- .+.+. ...++.++.|.+. .+..||+-+|+.--..+ ...++-++. ....+.-|+
T Consensus 148 ~~~Gi~~~~IilDPg~g~~g~~~~~~~~~l~~l~~l~~~---~~pg~pvl~G~Srksfg~~~~~~l~~t~-~~~a~~~g~ 223 (262)
T 1f6y_A 148 DEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKML---ADPAPKTVLGLSNVSQNCQNRPLINRTF-LAMAMACGL 223 (262)
T ss_dssp HHHTCCGGGEEEECCCCCTTTCTTHHHHHHHHHHHHHTC---CSSCCEEEEEGGGGGTTCSSHHHHHHHH-HHHHHHTTC
T ss_pred HHCCCCcccEEEeCCCCcCCCChHHHHHHHHHHHHHHHH---hCCCCCEEEeecCCcCCCCHHHHHHHHH-HHHHHHHhC
Confidence 999996 888753 22222 2344445544433 11279999998544333 234444433 244455565
Q ss_pred CcEEEee
Q 006566 339 GDTIRVS 345 (640)
Q Consensus 339 GDTIRVS 345 (640)
| ..||-
T Consensus 224 ~-~~iv~ 229 (262)
T 1f6y_A 224 M-SAIAD 229 (262)
T ss_dssp C-EEEEC
T ss_pred C-eEEEC
Confidence 3 44554
No 18
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=96.97 E-value=0.0087 Score=62.65 Aligned_cols=149 Identities=11% Similarity=0.107 Sum_probs=96.4
Q ss_pred HHHHHHHHHHH-HcCCCEEEEe----cCC------HHHHHHHHHHHHHhhcCCCCcceeec----cCCCHHHHHHHhhhc
Q 006566 118 AGTVEEVMRIA-DQGADLVRIT----VQG------KREADACFEIKNSLVQKNYNIPLVAD----IHFAPSVALRVAECF 182 (640)
Q Consensus 118 ~atv~Qi~rl~-~aGceiVRvt----vp~------~~~A~~l~~I~~~L~~~g~~iPLVAD----IHF~~~~Al~Aa~~v 182 (640)
+..++..+++. +.|+|||=|- -|+ .++++.++.|++. +++||+-| -=++|.++.+|++..
T Consensus 80 ~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~-----~~vPlsIDg~~~~T~~~eV~eaAleag 154 (323)
T 4djd_D 80 NEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQA-----VGVPLVVVGCGDVEKDHEVLEAVAEAA 154 (323)
T ss_dssp TCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHH-----CCSCEEEECCSCHHHHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhh-----CCceEEEECCCCCCCCHHHHHHHHHhc
Confidence 45788888898 9999999984 344 2455555555553 79999999 347899999999995
Q ss_pred Cce--eeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHH
Q 006566 183 DKI--RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVE 260 (640)
Q Consensus 183 ~KV--RINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVe 260 (640)
... =||.-|.. ++..+...|+++|.++=+-.+. | ++
T Consensus 155 ag~~~lINsv~~~-------------------------~~~~m~~laa~~g~~vVlmh~~------------d-----~~ 192 (323)
T 4djd_D 155 AGENLLLGNAEQE-------------------------NYKSLTAACMVHKHNIIARSPL------------D-----IN 192 (323)
T ss_dssp TTSCCEEEEEBTT-------------------------BCHHHHHHHHHHTCEEEEECSS------------C-----HH
T ss_pred CCCCCeEEECCcc-------------------------cHHHHHHHHHHhCCeEEEEccc------------h-----HH
Confidence 333 37754432 1456788999999999332211 1 35
Q ss_pred HHHHHHHHHHHCCC--CcEEEEEEe----CChhhHHHHHHHHHHH-HH-HcCCCcceEEEe
Q 006566 261 SAFEFARICRKLDF--HNFLFSMKA----SNPVVMVQAYRLLVAE-MY-VHGWDYPLHLGV 313 (640)
Q Consensus 261 SAle~~~i~e~~~F--~diviSmKs----Sn~~~mV~AyRlL~~~-m~-~~g~dyPLHLGV 313 (640)
-+.+.++.|++.|+ ++|++--=. .+....++..+.+-.. ++ ...+.||+-+|+
T Consensus 193 ~~~~l~~~a~~~GI~~e~IIlDPg~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~Gv 253 (323)
T 4djd_D 193 ICKQLNILINEMNLPLDHIVIDPSIGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTV 253 (323)
T ss_dssp HHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEH
T ss_pred HHHHHHHHHHHcCCCHHHEEEeCCCccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEec
Confidence 56677789999999 889985322 2222222222222210 10 134679999997
No 19
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=96.94 E-value=0.0011 Score=71.31 Aligned_cols=91 Identities=14% Similarity=0.165 Sum_probs=64.4
Q ss_pred CceEEEeecCCCCCCCchhHHHHHHHHHHHHCCCCCCEEEEeccCCCCCccchHHHHHHhhhhhhhccccceeeecCCCC
Q 006566 538 DATMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGTNVGALLVDGLGDGLLLEAPGQ 617 (640)
Q Consensus 538 ~~~v~il~~~~~~~~~~~v~~~R~l~~~L~~~g~~~PVi~~~~y~~~~~~~~~~l~aa~d~GaLL~DGlGDGi~l~~~~~ 617 (640)
+.+++.++ .|+-..-+.++|.|..+ +++|+-+-. ++.-...+=.+++|+.+|+||.||+||-|-+.-...
T Consensus 197 ~~iviS~K---aSdv~~~i~aYr~la~~-----~dyPLHLGv--TEAG~~~~G~IKSaigiG~LL~~GIGDTIRVSLT~d 266 (406)
T 4g9p_A 197 DKLVLSAK---VSKARDLVWVYRELARR-----TQAPLHLGL--TEAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTPS 266 (406)
T ss_dssp GGEEEEEE---CSSHHHHHHHHHHHHHH-----CCSCBEECC--TTCBSHHHHHHHHHHHHHHHHHTTCCSEEECCBCCC
T ss_pred hheEEEee---cCCHHHHHHHHHHHHHh-----CCCCceeee--ecCCCcccceechHHHHHHHHhccCchhEEeeccCC
Confidence 45788888 55555566777766554 578876643 343233457899999999999999999998765432
Q ss_pred Chh---hhhhhhhhhhhhcccccc
Q 006566 618 DFD---FLRDTSFNLLQGVCLMSI 638 (640)
Q Consensus 618 ~~~---~~~~~aF~ILQaaR~r~~ 638 (640)
+.. .--.++|.|||+.++|..
T Consensus 267 P~e~~~~EV~va~~ILqslglR~~ 290 (406)
T 4g9p_A 267 PKEPRTKEVEVAQEILQALGLRAF 290 (406)
T ss_dssp TTSCTTHHHHHHHHHHHHTTSCCC
T ss_pred CCcccHHHHHHHHHHHHHhCCccc
Confidence 221 123579999999999974
No 20
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=96.93 E-value=0.015 Score=59.42 Aligned_cols=143 Identities=16% Similarity=0.236 Sum_probs=103.5
Q ss_pred CceeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEe------cC------CHHHHHHHHHHHHH
Q 006566 87 KTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT------VQ------GKREADACFEIKNS 154 (640)
Q Consensus 87 ~Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvt------vp------~~~~A~~l~~I~~~ 154 (640)
....|.||++.+|+++|..|==.+ +-.|.+.+.+-+.++.++|++++|+- +| +.+.-+.|++.+++
T Consensus 23 ~~~~i~i~~~~iG~~~~~vIAgpc--~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~ 100 (276)
T 1vs1_A 23 RETVVEVEGVRIGGGSKAVIAGPC--SVESWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDE 100 (276)
T ss_dssp SCCCEEETTEEEBTTBCEEEEECS--BCCCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH
T ss_pred CCcEEEECCEEECCCCeEEEEecC--CCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHH
Confidence 345799999999999888888776 77899999999999999999999983 33 24444455555443
Q ss_pred hhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 155 LVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 155 L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
..+|++.++|= +.-+..+++.++-+-|--+|+-+ .++++.+-+.|.||
T Consensus 101 -----~Gl~~~te~~d-~~~~~~l~~~vd~~kIgs~~~~n--------------------------~~ll~~~a~~~kPV 148 (276)
T 1vs1_A 101 -----AGLPVVTEVLD-PRHVETVSRYADMLQIGARNMQN--------------------------FPLLREVGRSGKPV 148 (276)
T ss_dssp -----HTCCEEEECCC-GGGHHHHHHHCSEEEECGGGTTC--------------------------HHHHHHHHHHTCCE
T ss_pred -----cCCcEEEecCC-HHHHHHHHHhCCeEEECcccccC--------------------------HHHHHHHHccCCeE
Confidence 77999999975 55555556778889998888866 34677777889999
Q ss_pred EEeeCCCCCcHhHHHHhC-C-ChHHHHHHHHHHHHHHHHCCCCcEEEE
Q 006566 235 RIGTNHGSLSDRIMSYYG-D-SPRGMVESAFEFARICRKLDFHNFLFS 280 (640)
Q Consensus 235 RIGvNhGSLs~ril~ryG-d-tp~gMVeSAle~~~i~e~~~F~diviS 280 (640)
=+-+ | . |+.. ++.|.|.+ .+.|=.++++-
T Consensus 149 ~lk~-------------G~~~t~~e-i~~Ave~i---~~~Gn~~i~L~ 179 (276)
T 1vs1_A 149 LLKR-------------GFGNTVEE-LLAAAEYI---LLEGNWQVVLV 179 (276)
T ss_dssp EEEC-------------CTTCCHHH-HHHHHHHH---HHTTCCCEEEE
T ss_pred EEcC-------------CCCCCHHH-HHHHHHHH---HHcCCCeEEEE
Confidence 3333 3 2 4433 44455554 46676777663
No 21
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=96.81 E-value=0.036 Score=57.87 Aligned_cols=208 Identities=14% Similarity=0.187 Sum_probs=128.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec----CC----------HHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHh
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITV----QG----------KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA 179 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtv----p~----------~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa 179 (640)
..|.++.+++++++.++||+|+=|=. |+ .+|.+-+..+.+.|++. +++||.-|- |+|.+|.+|+
T Consensus 45 ~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~-~~vpISIDT-~~~~Va~aAl 122 (314)
T 3tr9_A 45 HLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKR-FPQLISVDT-SRPRVMREAV 122 (314)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHH-CCSEEEEEC-SCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhh-CCCeEEEeC-CCHHHHHHHH
Confidence 36899999999999999999999864 44 23333344444445543 689999997 8999999999
Q ss_pred hh-cCcee-eCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhH--HHHhCCCh
Q 006566 180 EC-FDKIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI--MSYYGDSP 255 (640)
Q Consensus 180 ~~-v~KVR-INPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ri--l~ryGdtp 255 (640)
++ ++=|= |+-++ + ..+.+.|+++|+|+=+--+.|- ++.+ ...| |-.
T Consensus 123 ~aGa~iINDVsg~~--~--------------------------~~m~~v~a~~g~~vVlMh~~G~-P~tmq~~~~y-dvv 172 (314)
T 3tr9_A 123 NTGADMINDQRALQ--L--------------------------DDALTTVSALKTPVCLMHFPSE-TRKPGSTTHF-YFL 172 (314)
T ss_dssp HHTCCEEEETTTTC--S--------------------------TTHHHHHHHHTCCEEEECCCCT-TCCTTSSCHH-HHH
T ss_pred HcCCCEEEECCCCC--c--------------------------hHHHHHHHHhCCeEEEECCCCC-Cccccccccc-chH
Confidence 98 55332 34444 1 1356778899999965555553 2211 2235 555
Q ss_pred HHHHHHHHHHHHHHHHCCCC--cEEEEE--E----eCChhhHHHHHHHHHH--HHHHcCCCcceEEEee------cC-CC
Q 006566 256 RGMVESAFEFARICRKLDFH--NFLFSM--K----ASNPVVMVQAYRLLVA--EMYVHGWDYPLHLGVT------EA-GE 318 (640)
Q Consensus 256 ~gMVeSAle~~~i~e~~~F~--diviSm--K----sSn~~~mV~AyRlL~~--~m~~~g~dyPLHLGVT------EA-G~ 318 (640)
+.+.+...+-++.|++.|.. +|+|-- = +.+ .-+.+.+|.. ++. ...||+=+|+. +- |.
T Consensus 173 ~ev~~~l~~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt---~~~n~~lL~~l~~l~--~lg~PvL~G~SRKsfig~~~~~ 247 (314)
T 3tr9_A 173 QSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKN---VSENFYLLNKLPEFV--AMGLPVLSGWSRKSMIGDVLNQ 247 (314)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEECCCCSGGGCCC---HHHHHHHHHTTHHHH--TTSSCBEECCTTCHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHEEEeCCCCchhhcCC---HHHHHHHHHHHHHHh--cCCCCEEEEechhhhhhhhcCC
Confidence 67889999999999999996 888752 1 111 2233443331 222 36799999982 11 22
Q ss_pred CCcceeehHHHHHHHhhhcCCcEEEeecCCCCchhhHHHHHHHh
Q 006566 319 GEDGRMKSAIGIGTLLQDGLGDTIRVSLTEPPEKEIDPCRRLAN 362 (640)
Q Consensus 319 gedGrIKSAiGIG~LL~DGIGDTIRVSLTedP~~Ei~va~~ILq 362 (640)
..+-|.-.++.+-++....=-+-|||- | +.|..-|.++.+
T Consensus 248 ~~~~R~~~t~a~~~~a~~~Ga~IvRvH---D-V~e~~~a~~~~~ 287 (314)
T 3tr9_A 248 PPENRLFGSIAADVLAVYHGASIIRTH---D-VKATREAIKIAT 287 (314)
T ss_dssp CGGGCHHHHHHHHHHHHHTTCSEEEES---C-HHHHHHHHHHHH
T ss_pred ChHHhHHHHHHHHHHHHHcCCcEEEeC---C-hHHHHHHHHHHH
Confidence 223455444444444333224777764 2 444444444444
No 22
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=96.78 E-value=0.019 Score=63.93 Aligned_cols=189 Identities=16% Similarity=0.221 Sum_probs=130.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCcee-eCCC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIR-VNPG 190 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVR-INPG 190 (640)
.|.+..+++.+++.++|++|+=|- |+ ..+.+.+..+.+.+++ .+++||.-|- ++|.++..|+++++..- ||-=
T Consensus 337 ~~~~~a~~~A~~~v~~GAdiIDIg-pg~~~v~~~ee~~rvv~~i~~-~~~vpisIDT-~~~~v~eaal~~~~G~~iINdi 413 (566)
T 1q7z_A 337 GNEEIVIKEAKTQVEKGAEVLDVN-FGIESQIDVRYVEKIVQTLPY-VSNVPLSLDI-QNVDLTERALRAYPGRSLFNSA 413 (566)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEE-CSSGGGSCHHHHHHHHHHHHH-HTCSCEEEEC-CCHHHHHHHHHHCSSCCEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHh-hCCceEEEeC-CCHHHHHHHHHhcCCCCEEEEC
Confidence 488999999999999999999998 44 3445555555555533 3689999997 59999999999863222 5542
Q ss_pred CCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHH
Q 006566 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICR 270 (640)
Q Consensus 191 N~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e 270 (640)
|-.. ++|..+++.|+++|.++=+-.+.|..+ .|.+..++.+.+-++.|+
T Consensus 414 s~~~-----------------------~~~~~~~~~~~~~g~~vV~m~~~~~~p--------~t~~~~~~~l~~~~~~a~ 462 (566)
T 1q7z_A 414 KVDE-----------------------EELEMKINLLKKYGGTLIVLLMGKDVP--------KSFEERKEYFEKALKILE 462 (566)
T ss_dssp ESCH-----------------------HHHHHHHHHHHHHCCEEEEESCSSSCC--------CSHHHHHHHHHHHHHHHH
T ss_pred Ccch-----------------------hhHHHHHHHHHHhCCeEEEEeCCCCCc--------CCHHHHHHHHHHHHHHHH
Confidence 2221 247788999999999985555444222 234668999999999999
Q ss_pred HCCC-CcEEEEEEe----C--ChhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCC--cceeehHHHHHHHhhhcCCcE
Q 006566 271 KLDF-HNFLFSMKA----S--NPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGE--DGRMKSAIGIGTLLQDGLGDT 341 (640)
Q Consensus 271 ~~~F-~diviSmKs----S--n~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~ge--dGrIKSAiGIG~LL~DGIGDT 341 (640)
+.|+ ++|+|--=- . .-..+++.++.+.+ ..||+=+|+.--..+. +.++-++.. ...+..|. |-
T Consensus 463 ~~Gi~~~IilDPg~~~igfgk~~~~~l~~~~~~~~------~g~p~l~G~Snksf~~~~~~~l~~t~a-~~a~~~G~-~i 534 (566)
T 1q7z_A 463 RHDFSDRVIFDPGVLPLGAEGKPVEVLKTIEFISS------KGFNTTVGLSNLSFGLPDRSYYNTAFL-VLGISKGL-SS 534 (566)
T ss_dssp HTTCGGGEEEECCCCCTTTTCCHHHHHHHHHHHHH------TTCEECCBGGGGSTTSTTHHHHHHHHH-HHHHHTTC-CE
T ss_pred HCCCCCcEEEeCCCCcccCcHHHHHHHHHHHHHHh------CCCCEEEEeCcccccCCHHHHHHHHHH-HHHHHcCC-CE
Confidence 9999 799986432 0 11345566665532 2799999996554433 345555555 44455554 88
Q ss_pred EEee
Q 006566 342 IRVS 345 (640)
Q Consensus 342 IRVS 345 (640)
+||.
T Consensus 535 ~rvh 538 (566)
T 1q7z_A 535 AIMN 538 (566)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8885
No 23
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=96.71 E-value=0.099 Score=52.63 Aligned_cols=230 Identities=20% Similarity=0.235 Sum_probs=129.5
Q ss_pred ceeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHHhhcCCCCcce
Q 006566 88 TRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNYNIPL 164 (640)
Q Consensus 88 Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~---~~A~~l~~I~~~L~~~g~~iPL 164 (640)
++.|+|+++.||.+.|-..=+-+- .+.+..++|+.++..+|||+|=+-+.-. .+.+.+.+.-..||+.-.++|+
T Consensus 5 ~~~v~v~~~~ig~g~PkIcvpl~~---~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPi 81 (258)
T 4h3d_A 5 KRKVQVKNITIGEGRPKICVPIIG---KNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPL 81 (258)
T ss_dssp CCCEEETTEEETSSSCEEEEEECC---SSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCE
T ss_pred cceEEEcCEEeCCCCCEEEEEeCC---CCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCE
Confidence 467999999999999966656654 3578889999999999999997776432 3334444444445544457899
Q ss_pred eecc-------CCC--HH--HHH--HHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcC
Q 006566 165 VADI-------HFA--PS--VAL--RVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG 231 (640)
Q Consensus 165 VADI-------HF~--~~--~Al--~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g 231 (640)
+.=+ +|. .. .++ .+++. |. .| |..+|+ ..-++.+..+++.+++.|
T Consensus 82 I~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~--------~~-~d----~iDvEl---------~~~~~~~~~l~~~a~~~~ 139 (258)
T 4h3d_A 82 LFTFRSVVEGGEKLISRDYYTTLNKEISNT--------GL-VD----LIDVEL---------FMGDEVIDEVVNFAHKKE 139 (258)
T ss_dssp EEECCCGGGTCSCCCCHHHHHHHHHHHHHT--------TC-CS----EEEEEG---------GGCHHHHHHHHHHHHHTT
T ss_pred EEEEechhhCCCCCCCHHHHHHHHHHHHhc--------CC-ch----hhHHhh---------hccHHHHHHHHHHHHhCC
Confidence 8643 121 11 111 11110 00 01 122222 112345677899999999
Q ss_pred CeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcce-E
Q 006566 232 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPL-H 310 (640)
Q Consensus 232 ~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPL-H 310 (640)
+.| |.-+|= |..||.. +.-.+.++-+.+.|-+=++|-..+.+......-.+ +..++.+...+.|+ -
T Consensus 140 ~ki-I~S~Hd---------f~~TP~~--~el~~~~~~~~~~gaDIvKia~~~~~~~D~l~Ll~-~~~~~~~~~~~~P~I~ 206 (258)
T 4h3d_A 140 VKV-IISNHD---------FNKTPKK--EEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLE-ATNEMFKIYADRPIIT 206 (258)
T ss_dssp CEE-EEEEEE---------SSCCCCH--HHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHH-HHHHHHHHTCSSCBEE
T ss_pred CEE-EEEEec---------CCCCCCH--HHHHHHHHHHHHhCCCEEEEEEccCCHHHHHHHHH-HHHHHHHhcCCCCEEE
Confidence 888 777662 2235521 23345566677888877788888887655432222 23444444557887 3
Q ss_pred EEeecCCCCCcceeehHHH--HHHHhhhcCCcEEEeecCCC-CchhhHHHHHHHh
Q 006566 311 LGVTEAGEGEDGRMKSAIG--IGTLLQDGLGDTIRVSLTEP-PEKEIDPCRRLAN 362 (640)
Q Consensus 311 LGVTEAG~gedGrIKSAiG--IG~LL~DGIGDTIRVSLTed-P~~Ei~va~~ILq 362 (640)
+ ++|+-|++-=..| +|+-|.-|-.+. -|-.+- +..|+.-++++|.
T Consensus 207 ~-----~MG~~G~~SRi~~~~fGS~lTf~~~~~--~sAPGQl~~~el~~~l~lL~ 254 (258)
T 4h3d_A 207 M-----SMSGMGVISRLCGEIFGSALTFGAAKS--VSAPGQISFKELNSVLNLLH 254 (258)
T ss_dssp E-----ECTGGGGGGGTCHHHHCBCEEECBCC-----CTTCCBHHHHHHHHHHHH
T ss_pred E-----eCCCCChHHHHHHHHhCCceEeccCCC--CCCCCCCCHHHHHHHHHHHH
Confidence 3 3555565543332 555555444322 122111 2466666666664
No 24
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=96.64 E-value=0.048 Score=55.91 Aligned_cols=158 Identities=16% Similarity=0.275 Sum_probs=109.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEe----------cCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRIT----------VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvt----------vp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~ 183 (640)
.|.++.++++.+|.+.||+|+=|= ++-.+|-+-+.-+.+.|++ .++|+--|- |.|.+|.+|+++ ++
T Consensus 27 ~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~--~~v~iSIDT-~~~~Va~~al~aGa~ 103 (270)
T 4hb7_A 27 NNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG--FDVKISVDT-FRSEVAEACLKLGVD 103 (270)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT--SSSEEEEEC-SCHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc--CCCeEEEEC-CCHHHHHHHHHhccc
Confidence 578999999999999999999993 3345666666666677765 689999995 999999999998 65
Q ss_pred ceeeCC--CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHH
Q 006566 184 KIRVNP--GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261 (640)
Q Consensus 184 KVRINP--GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeS 261 (640)
= ||= |-..|+ .+.+.|+++++++=+==+.|. .+|.+--..+...
T Consensus 104 i--INDVs~g~~d~--------------------------~m~~~va~~~~~~vlMH~~~~------p~~~~vv~ev~~~ 149 (270)
T 4hb7_A 104 M--INDQWAGLYDH--------------------------RMFQIVAKYDAEIILMHNGNG------NRDEPVVEEMLTS 149 (270)
T ss_dssp E--EEETTTTSSCT--------------------------HHHHHHHHTTCEEEEECCCSS------CCSSCHHHHHHHH
T ss_pred e--eccccccccch--------------------------hHHHHHHHcCCCeEEeccccC------CccccchhHHHHH
Confidence 3 451 222232 256788899999955444443 1365544566666
Q ss_pred HHHHHHHHHHCCC--CcEEEE-----EEeCChhhHHHHHHHHHHHHHHcCCCcceEEEee
Q 006566 262 AFEFARICRKLDF--HNFLFS-----MKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314 (640)
Q Consensus 262 Ale~~~i~e~~~F--~diviS-----mKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLGVT 314 (640)
-.+.++.|++.|. ++|+|- -| ..-|.|.+|...=.=..+.||+=+|+.
T Consensus 150 l~~~i~~a~~aGI~~~~IilDPGiGFgK-----t~~~N~~ll~~l~~~~~lg~PvLvG~S 204 (270)
T 4hb7_A 150 LLAQAHQAKIAGIPSNKIWLDPGIGFAK-----TRNEEAEVMARLDELVATEYPVLLATS 204 (270)
T ss_dssp HHHHHHHHHHTTCCGGGEEEECCTTSSC-----CHHHHHHHHTCHHHHHTTCSCBEECCT
T ss_pred HHHHHHHHHHcCCCCceEEEeCCCCccc-----ccccHHHHHhhHHHHhcCCCCEEEEec
Confidence 7777889999999 578774 13 233455554421111246799999974
No 25
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=96.59 E-value=0.19 Score=50.54 Aligned_cols=195 Identities=16% Similarity=0.215 Sum_probs=115.2
Q ss_pred eeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH---HHHHHHHHHHHhhcCCCCccee
Q 006566 89 RTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR---EADACFEIKNSLVQKNYNIPLV 165 (640)
Q Consensus 89 r~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~---~A~~l~~I~~~L~~~g~~iPLV 165 (640)
+.|+|+++.||.+.|..+=|-+- .|.+..++++.++.+.|||+|=+-+.-.+ +++.+.+....||+.--++|++
T Consensus 6 ~~~~v~~~~~g~~~p~Icv~l~~---~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI 82 (257)
T 2yr1_A 6 KAIKVRNIWIGGTEPCICAPVVG---EDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPIL 82 (257)
T ss_dssp SCEEETTEEESSSSCEEEEEECC---SSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred ceEEEeeeeeCCCCcEEEEEecC---CCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEE
Confidence 36999999999999966666554 67888899999999999999987763222 2333333333333321278999
Q ss_pred ecc-------CC---CHHHHHHHhhhcCceeeC-CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 166 ADI-------HF---APSVALRVAECFDKIRVN-PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 166 ADI-------HF---~~~~Al~Aa~~v~KVRIN-PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
.-+ +| +...-++..+.+ +|.. | .|.| +|++ .-+ .+..+++.+++.|+.+
T Consensus 83 ~T~Rt~~eGG~~~~~~~~~~~~ll~~~--~~~g~~-d~iD-------vEl~---------~~~-~~~~l~~~~~~~~~kv 142 (257)
T 2yr1_A 83 FTIRSEREGGQPIPLNEAEVRRLIEAI--CRSGAI-DLVD-------YELA---------YGE-RIADVRRMTEECSVWL 142 (257)
T ss_dssp EECCCTTTTCCCCSSCHHHHHHHHHHH--HHHTCC-SEEE-------EEGG---------GTT-HHHHHHHHHHHTTCEE
T ss_pred EEEeecccCCCCCCCCHHHHHHHHHHH--HHcCCC-CEEE-------EECC---------CCh-hHHHHHHHHHhCCCEE
Confidence 754 12 332222222221 1111 1 1222 2221 111 4667899999998876
Q ss_pred EEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcce-EEEe
Q 006566 235 RIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPL-HLGV 313 (640)
Q Consensus 235 RIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPL-HLGV 313 (640)
|+-+|= |..||. .+..++.++-+++.|-+=++|-..+.+......-.+.. .++ +.+.+.|+ -+
T Consensus 143 -I~S~Hd---------f~~tP~--~~el~~~~~~~~~~gaDivKia~~a~s~~D~l~ll~~~-~~~-~~~~~~P~I~~-- 206 (257)
T 2yr1_A 143 -VVSRHY---------FDGTPR--KETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQAT-EEA-RRELAIPLITM-- 206 (257)
T ss_dssp -EEEEEE---------SSCCCC--HHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHH-HHH-HHHCSSCEEEE--
T ss_pred -EEEecC---------CCCCcC--HHHHHHHHHHHHhcCCCEEEEEeccCCHHHHHHHHHHH-HHH-hccCCCCEEEE--
Confidence 777761 223553 35556677778899999899999888866544333322 333 23345676 23
Q ss_pred ecCCCCCcceee
Q 006566 314 TEAGEGEDGRMK 325 (640)
Q Consensus 314 TEAG~gedGrIK 325 (640)
.+|+-|++-
T Consensus 207 ---~MG~~G~~S 215 (257)
T 2yr1_A 207 ---AMGGLGAIT 215 (257)
T ss_dssp ---ECTTTTHHH
T ss_pred ---ECCCCcchH
Confidence 345556553
No 26
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=96.52 E-value=0.033 Score=54.54 Aligned_cols=155 Identities=11% Similarity=0.115 Sum_probs=101.8
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH--------HHHHHHHHHHHhhcCCCCcceee-ccC--
Q 006566 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR--------EADACFEIKNSLVQKNYNIPLVA-DIH-- 169 (640)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~--------~A~~l~~I~~~L~~~g~~iPLVA-DIH-- 169 (640)
.-++-+||.+-.+..+.+..++ .+.++|.+-|-+..+... ..+.++++++.|.+.|..+..+. ..|
T Consensus 16 ~~~~gi~~~~~~~~~~~~~~l~---~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~ 92 (295)
T 3cqj_A 16 QIPLGIYEKALPAGECWLERLQ---LAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRR 92 (295)
T ss_dssp CCCEEEEGGGSCCCSCHHHHHH---HHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGT
T ss_pred cccceeeeecCCCCCCHHHHHH---HHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccC
Confidence 4678899988766677776655 456789999999987642 35667888998888898876543 333
Q ss_pred --C---CHH----------HHH-HHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCC
Q 006566 170 --F---APS----------VAL-RVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232 (640)
Q Consensus 170 --F---~~~----------~Al-~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~ 232 (640)
| +|. -++ .|.+. +..|++.++.... +...++.++++.+.+.++.+.|+++|+
T Consensus 93 ~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~-----------~~~~~~~~~~~~~~l~~l~~~a~~~Gv 161 (295)
T 3cqj_A 93 FPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYY-----------QEANNETRRRFRDGLKESVEMASRAQV 161 (295)
T ss_dssp SCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCSS-----------SCCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCc-----------CcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2 232 122 33344 8889887553210 111244567888899999999999996
Q ss_pred eEEEee-CCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCC
Q 006566 233 AVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (640)
Q Consensus 233 aIRIGv-NhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn 285 (640)
. |++ ||.. .+..|+ -+..+++++.|-.++-+-+=..+
T Consensus 162 ~--l~lEn~~~-------~~~~~~-------~~~~~l~~~v~~~~vg~~~D~~h 199 (295)
T 3cqj_A 162 T--LAMEIMDY-------PLMNSI-------SKALGYAHYLNNPWFQLYPDIGN 199 (295)
T ss_dssp E--EEEECCSS-------GGGCSH-------HHHHHHHHHHCCTTEEEECBHHH
T ss_pred E--EEEeeCCC-------cccCCH-------HHHHHHHHhcCCCCeEEEeccch
Confidence 5 566 5542 223344 45667788888777777664443
No 27
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=96.49 E-value=0.037 Score=58.51 Aligned_cols=142 Identities=16% Similarity=0.205 Sum_probs=102.0
Q ss_pred CceeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEe------cC------CHHHHHHHHHHHHH
Q 006566 87 KTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT------VQ------GKREADACFEIKNS 154 (640)
Q Consensus 87 ~Tr~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvt------vp------~~~~A~~l~~I~~~ 154 (640)
....|.||++.||++++..|==.+. -.|.+.+.+-+.++.++|++++|+- .| +.+.-+.|++.++
T Consensus 91 ~~~~i~i~~~~iG~~~~~vIAgpcs--~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~- 167 (350)
T 1vr6_A 91 EDTVIDLGDVKIGNGYFTIIAGPCS--VEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAAD- 167 (350)
T ss_dssp SCCCEECSSCEESTTEEEEEEECSB--CCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHH-
T ss_pred cCCEEEECCEEECCCCeEEEEeCCC--cCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHH-
Confidence 3456999999999998888887766 6799999999999999999999983 33 3344444444444
Q ss_pred hhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 155 LVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 155 L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
...+|++.++|= +.-+..+++.++-+-|--+|+-+ .+|++.+-+.|.||
T Consensus 168 ----e~Gl~~~te~~d-~~~~~~l~~~vd~lkIgAr~~~n--------------------------~~LL~~va~~~kPV 216 (350)
T 1vr6_A 168 ----KYGMYVVTEALG-EDDLPKVAEYADIIQIGARNAQN--------------------------FRLLSKAGSYNKPV 216 (350)
T ss_dssp ----HHTCEEEEECSS-GGGHHHHHHHCSEEEECGGGTTC--------------------------HHHHHHHHTTCSCE
T ss_pred ----HcCCcEEEEeCC-HHHHHHHHHhCCEEEECcccccC--------------------------HHHHHHHHccCCcE
Confidence 377999999974 55555566778989998888866 24666666889999
Q ss_pred EEeeCCCCCcHhHHHHhC-C-ChHHHHHHHHHHHHHHHHCCCCcEEE
Q 006566 235 RIGTNHGSLSDRIMSYYG-D-SPRGMVESAFEFARICRKLDFHNFLF 279 (640)
Q Consensus 235 RIGvNhGSLs~ril~ryG-d-tp~gMVeSAle~~~i~e~~~F~divi 279 (640)
=+-+ | . |++.| +.|.|+ +.+.|=.++++
T Consensus 217 ilk~-------------G~~~tl~ei-~~Ave~---i~~~GN~~viL 246 (350)
T 1vr6_A 217 LLKR-------------GFMNTIEEF-LLSAEY---IANSGNTKIIL 246 (350)
T ss_dssp EEEC-------------CTTCCHHHH-HHHHHH---HHHTTCCCEEE
T ss_pred EEcC-------------CCCCCHHHH-HHHHHH---HHHCCCCeEEE
Confidence 3333 3 2 55444 334444 45677778887
No 28
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=96.26 E-value=0.11 Score=53.04 Aligned_cols=186 Identities=16% Similarity=0.205 Sum_probs=114.7
Q ss_pred eeEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH---HHHHHHHHHHHhhcCCCCccee
Q 006566 89 RTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR---EADACFEIKNSLVQKNYNIPLV 165 (640)
Q Consensus 89 r~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~---~A~~l~~I~~~L~~~g~~iPLV 165 (640)
++|+|+++.||++.|-..=|-+- .|.+...+++.++.+.|||+|=+-+.-.+ .++.+.+.-+.||+.-.++|++
T Consensus 26 ~~v~v~~~~~g~g~p~i~v~l~~---~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI 102 (276)
T 3o1n_A 26 KTVTVRDLVVGEGAPKIIVSLMG---KTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLL 102 (276)
T ss_dssp CCEEETTEEETSSSCEEEEEECC---SSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEE
T ss_pred eEEEECCEEeCCCCcEEEEEeCC---CCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEE
Confidence 35999999999999987777654 45788888888888899999988765433 2233444444444433479998
Q ss_pred eccC-------C--CHHHHHHHhhhcCceeeC-CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEE
Q 006566 166 ADIH-------F--APSVALRVAECFDKIRVN-PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (640)
Q Consensus 166 ADIH-------F--~~~~Al~Aa~~v~KVRIN-PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIR 235 (640)
.=+- | +...-++..+.+ +|.. | .|.| +|++ .=++.+..+++.+++.|+.|
T Consensus 103 ~T~Rt~~eGG~~~~~~~~~~~ll~~~--l~~g~~-dyID-------vEl~---------~~~~~~~~l~~~a~~~~~kv- 162 (276)
T 3o1n_A 103 FTFRSAKEGGEQALTTGQYIDLNRAA--VDSGLV-DMID-------LELF---------TGDDEVKATVGYAHQHNVAV- 162 (276)
T ss_dssp EECCBGGGTCSBCCCHHHHHHHHHHH--HHHTCC-SEEE-------EEGG---------GCHHHHHHHHHHHHHTTCEE-
T ss_pred EEEEEhhhCCCCCCCHHHHHHHHHHH--HhcCCC-CEEE-------EECc---------CCHHHHHHHHHHHHhCCCEE-
Confidence 7432 2 222222222221 1221 1 2222 3322 11345778899999999988
Q ss_pred EeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcce
Q 006566 236 IGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPL 309 (640)
Q Consensus 236 IGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPL 309 (640)
|+-+| -|..||. .+...+.++-+.+.|-+=++|-..+.+......-.+ +..++.+...+.|+
T Consensus 163 I~S~H---------df~~tP~--~~el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll~-~~~~~~~~~~~~Pl 224 (276)
T 3o1n_A 163 IMSNH---------DFHKTPA--AEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLT-ATVEMQERYADRPI 224 (276)
T ss_dssp EEEEE---------ESSCCCC--HHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHH-HHHHHHHHTCCSCC
T ss_pred EEEee---------cCCCCcC--HHHHHHHHHHHHHcCCCEEEEEecCCChHHHHHHHH-HHHHHHhcCCCCCE
Confidence 77777 2344664 366667778888999888888888887655333222 22333333345676
No 29
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=96.20 E-value=0.044 Score=56.96 Aligned_cols=167 Identities=14% Similarity=0.110 Sum_probs=107.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec----CCH------HHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITV----QGK------READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FD 183 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtv----p~~------~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~ 183 (640)
.|.++.+++.+++.++|++||=|=. |+- +|.+.+..+.+.|++. +++||.-|- |+|.+|.+|+++ ++
T Consensus 30 ~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~-~~vpiSIDT-~~~~Va~aAl~aGa~ 107 (314)
T 2vef_A 30 FALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKE-SDVLISIDT-WKSQVAEAALAAGAD 107 (314)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHH-CCCEEEEEC-SCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhh-CCceEEEeC-CCHHHHHHHHHcCCC
Confidence 4789999999999999999999988 542 5666655555556653 589999996 899999999998 54
Q ss_pred cee-eCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCC-CcHh---------------
Q 006566 184 KIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS-LSDR--------------- 246 (640)
Q Consensus 184 KVR-INPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGS-Ls~r--------------- 246 (640)
=|= |+-++. |. .+.+.|+++|.++=+=.+.|. .+..
T Consensus 108 iINDVsg~~~-d~--------------------------~m~~v~a~~~~~vvlmh~~~~g~p~~~~~~~~~~~~~g~~~ 160 (314)
T 2vef_A 108 LVNDITGLMG-DE--------------------------KMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGFGQAF 160 (314)
T ss_dssp EEEETTTTCS-CT--------------------------THHHHHHHHTCEEEEECCHHHHCTTSTTTTTSCCCCC--CC
T ss_pred EEEECCCCCC-Ch--------------------------HHHHHHHHcCCCEEEEecCCCCCCCCccccccccccccccc
Confidence 432 334432 21 245667899999844333320 0000
Q ss_pred ---HHHHhCCC-hHH-HHHHHHHHHHHHHHCCC--CcEEEEE-----EeCChhhHHHHHHHHHHHHHHcCCCcceEEEee
Q 006566 247 ---IMSYYGDS-PRG-MVESAFEFARICRKLDF--HNFLFSM-----KASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314 (640)
Q Consensus 247 ---il~ryGdt-p~g-MVeSAle~~~i~e~~~F--~diviSm-----KsSn~~~mV~AyRlL~~~m~~~g~dyPLHLGVT 314 (640)
-...|.|- .+. +.+...+-++.|++.|+ .+|+|-- |+. ....+.+|.|.+. . ...||+=+|+.
T Consensus 161 ~~~~~~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~IilDPGiGF~kt~--~~nl~ll~~l~~l-~--~~g~PvL~G~S 235 (314)
T 2vef_A 161 TEEELADFETLPIEELMEAFFERALARAAEAGIAPENILLDPGIGFGLTK--KENLLLLRDLDKL-H--QKGYPIFLGVS 235 (314)
T ss_dssp CC--CHHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEEEECCTTSSCCH--HHHHHHHHTHHHH-H--TTSSCBEEECS
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCcccch--HHHHHHHHHHHHh-h--cCCCCEEEEeC
Confidence 01124332 333 45667788999999999 6899873 432 2234444444332 2 36799999986
Q ss_pred c
Q 006566 315 E 315 (640)
Q Consensus 315 E 315 (640)
-
T Consensus 236 r 236 (314)
T 2vef_A 236 R 236 (314)
T ss_dssp S
T ss_pred c
Confidence 5
No 30
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=96.10 E-value=0.065 Score=55.66 Aligned_cols=158 Identities=9% Similarity=0.013 Sum_probs=106.3
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEe----cCC---------HHHHHHHHHHHHHhhcCCCCcceeeccCC---CHHHH
Q 006566 112 NDTKDVAGTVEEVMRIADQGADLVRIT----VQG---------KREADACFEIKNSLVQKNYNIPLVADIHF---APSVA 175 (640)
Q Consensus 112 t~T~Dv~atv~Qi~rl~~aGceiVRvt----vp~---------~~~A~~l~~I~~~L~~~g~~iPLVADIHF---~~~~A 175 (640)
....+++..++=+..|.++|.++|=+. .|. ..+.+.++.|++. .-++|+++=... +.+-.
T Consensus 24 ~~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~----~~~~~i~~l~~p~~~~~~~i 99 (345)
T 1nvm_A 24 RHQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGE----ISHAQIATLLLPGIGSVHDL 99 (345)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTT----CSSSEEEEEECBTTBCHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhh----CCCCEEEEEecCCcccHHHH
Confidence 335789999999999999999999996 442 4566677777663 235777764212 46677
Q ss_pred HHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCC
Q 006566 176 LRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254 (640)
Q Consensus 176 l~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdt 254 (640)
..|+++ ++.|||. ..- ++ -+.+.++++.||++|..++..+-..+ ..+
T Consensus 100 ~~a~~aGvd~v~I~-----~~~--------s~----------~~~~~~~i~~ak~~G~~v~~~~~~a~---------~~~ 147 (345)
T 1nvm_A 100 KNAYQAGARVVRVA-----THC--------TE----------ADVSKQHIEYARNLGMDTVGFLMMSH---------MIP 147 (345)
T ss_dssp HHHHHHTCCEEEEE-----EET--------TC----------GGGGHHHHHHHHHHTCEEEEEEESTT---------SSC
T ss_pred HHHHhCCcCEEEEE-----Eec--------cH----------HHHHHHHHHHHHHCCCEEEEEEEeCC---------CCC
Confidence 788888 9999993 111 01 03478899999999999988762221 124
Q ss_pred hHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCC-CcceEE
Q 006566 255 PRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW-DYPLHL 311 (640)
Q Consensus 255 p~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~-dyPLHL 311 (640)
| +-..+.++.+++.|-+ .||++.+.=..+=..++.+++.+.++-- +-|+|+
T Consensus 148 ~----e~~~~ia~~~~~~Ga~--~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~ 199 (345)
T 1nvm_A 148 A----EKLAEQGKLMESYGAT--CIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGM 199 (345)
T ss_dssp H----HHHHHHHHHHHHHTCS--EEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEE
T ss_pred H----HHHHHHHHHHHHCCCC--EEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEE
Confidence 4 4445566666666766 7899987655555566666666654422 578877
No 31
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=96.09 E-value=0.13 Score=49.73 Aligned_cols=153 Identities=14% Similarity=0.111 Sum_probs=101.3
Q ss_pred eEEEeccCCCC-CCHHHHHHHHHHHHHcCCCEEEEecCCH-----HHHHHHHHHHHHhhcCCCCcceeeccCCC---H--
Q 006566 104 IRVQTMTTNDT-KDVAGTVEEVMRIADQGADLVRITVQGK-----READACFEIKNSLVQKNYNIPLVADIHFA---P-- 172 (640)
Q Consensus 104 I~VQSMt~t~T-~Dv~atv~Qi~rl~~aGceiVRvtvp~~-----~~A~~l~~I~~~L~~~g~~iPLVADIHF~---~-- 172 (640)
+.++|++-.+. .+.+.++ ..++++|++-|=+..+.. -+.+.++++++.|.+.|..+..++ .|++ +
T Consensus 3 lg~~~~~~~~~~~~~~~~l---~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-~~~~~~~~~~ 78 (286)
T 3dx5_A 3 YSLCTISFRHQLISFTDIV---QFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMIS-DYLDISLSAD 78 (286)
T ss_dssp EEEEGGGGTTSCCCHHHHH---HHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEE-CCCCCSTTSC
T ss_pred EEEEeeeccCCCCCHHHHH---HHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEe-cCCCCCCchh
Confidence 56777665543 5666554 456678999998865421 124678899999999999888764 2441 1
Q ss_pred ---------HHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCC
Q 006566 173 ---------SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (640)
Q Consensus 173 ---------~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGS 242 (640)
+....|.+. +..|++.||...... . ..+.++++.+.+.++.+.|+++|+.+=|= ||..
T Consensus 79 ~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~-------~----~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE-~~~~ 146 (286)
T 3dx5_A 79 FEKTIEKCEQLAILANWFKTNKIRTFAGQKGSAD-------F----SQQERQEYVNRIRMICELFAQHNMYVLLE-THPN 146 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGG-------S----CHHHHHHHHHHHHHHHHHHHHTTCEEEEE-CCTT
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCccc-------C----cHHHHHHHHHHHHHHHHHHHHhCCEEEEe-cCCC
Confidence 122234444 899999999875421 1 12346888889999999999999866444 4421
Q ss_pred CcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCCh
Q 006566 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286 (640)
Q Consensus 243 Ls~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~ 286 (640)
.+..|+ -+..+++++.|-.++-+-+=..+.
T Consensus 147 -------~~~~~~-------~~~~~l~~~~~~~~vg~~~D~~h~ 176 (286)
T 3dx5_A 147 -------TLTDTL-------PSTLELLGEVDHPNLKINLDFLHI 176 (286)
T ss_dssp -------STTSSH-------HHHHHHHHHHCCTTEEEEEEHHHH
T ss_pred -------cCcCCH-------HHHHHHHHhcCCCCeEEEeccccH
Confidence 123344 356778888887888888766654
No 32
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=96.09 E-value=0.15 Score=53.84 Aligned_cols=196 Identities=17% Similarity=0.320 Sum_probs=130.7
Q ss_pred eeEEEceeecCCCC-ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEe--------cC-------------------
Q 006566 89 RTVMVGNVAIGSEH-PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT--------VQ------------------- 140 (640)
Q Consensus 89 r~V~VG~v~IGG~~-PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvt--------vp------------------- 140 (640)
..|.||++.||+++ |..|==+...+--|.+-..+=|....+|||+.||+- +|
T Consensus 5 ~~i~i~~~~iG~~~~~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~ 84 (349)
T 2wqp_A 5 NEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIME 84 (349)
T ss_dssp CEEEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHH
T ss_pred CeEEECCEEECCCCceEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHH
Confidence 34999999999997 667766778888899999999999999999999996 22
Q ss_pred ----CHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhh
Q 006566 141 ----GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQH 215 (640)
Q Consensus 141 ----~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~ 215 (640)
+.+.-+.|.+.+++ ..+|.++.+ ||+.-+....++ ++-+-|--+|+.+
T Consensus 85 ~~~l~~e~~~~L~~~~~~-----~Gi~~~st~-~d~~svd~l~~~~v~~~KI~S~~~~n--------------------- 137 (349)
T 2wqp_A 85 RCALNEEDEIKLKEYVES-----KGMIFISTL-FSRAAALRLQRMDIPAYKIGSGECNN--------------------- 137 (349)
T ss_dssp HHCCCHHHHHHHHHHHHH-----TTCEEEEEE-CSHHHHHHHHHHTCSCEEECGGGTTC---------------------
T ss_pred HhCCCHHHHHHHHHHHHH-----hCCeEEEee-CCHHHHHHHHhcCCCEEEECcccccC---------------------
Confidence 22333445555543 678999887 788888878888 9999999999976
Q ss_pred hHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCC-ChHHHHHHHHHHHHHHHHCCCCcEEEE-EEeCChh----hH
Q 006566 216 IEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFS-MKASNPV----VM 289 (640)
Q Consensus 216 I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGd-tp~gMVeSAle~~~i~e~~~F~diviS-mKsSn~~----~m 289 (640)
-||++.+-+.|.||=+-+ |- |. .=++.|.|++ .+.|- |+++= +=++=|. +-
T Consensus 138 -----~~LL~~va~~gkPviLst-------------Gmat~-~Ei~~Ave~i---~~~G~-~iiLlhc~s~Yp~~~~~~n 194 (349)
T 2wqp_A 138 -----YPLIKLVASFGKPIILST-------------GMNSI-ESIKKSVEII---REAGV-PYALLHCTNIYPTPYEDVR 194 (349)
T ss_dssp -----HHHHHHHHTTCSCEEEEC-------------TTCCH-HHHHHHHHHH---HHHTC-CEEEEECCCCSSCCGGGCC
T ss_pred -----HHHHHHHHhcCCeEEEEC-------------CCCCH-HHHHHHHHHH---HHcCC-CEEEEeccCCCCCChhhcC
Confidence 358888888999995554 42 33 3345566655 34444 66552 2122111 11
Q ss_pred HHHHHHHHHHHHHcCC-CcceEEEeecCCCCCcceeehHHHHHHHhhhcCCcEEEeecCCC
Q 006566 290 VQAYRLLVAEMYVHGW-DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEP 349 (640)
Q Consensus 290 V~AyRlL~~~m~~~g~-dyPLHLGVTEAG~gedGrIKSAiGIG~LL~DGIGDTIRVSLTed 349 (640)
+.+...|-++ + ++|. |..-=..| -..-..|+.+|+ |-|-+-.|-|
T Consensus 195 L~ai~~lk~~-----f~~lpV--g~sdHt~G-~~~~~AAvAlGA-------~iIEkH~tld 240 (349)
T 2wqp_A 195 LGGMNDLSEA-----FPDAII--GLSDHTLD-NYACLGAVALGG-------SILERHFTDR 240 (349)
T ss_dssp THHHHHHHHH-----CTTSEE--EEECCSSS-SHHHHHHHHHTC-------CEEEEEBCSC
T ss_pred HHHHHHHHHH-----CCCCCE--EeCCCCCc-HHHHHHHHHhCC-------CEEEeCCCcc
Confidence 3344444444 4 5565 76433333 445566667775 4666665533
No 33
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=96.07 E-value=0.041 Score=52.45 Aligned_cols=144 Identities=13% Similarity=0.147 Sum_probs=91.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceee----cc-------CCCH----------
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA----DI-------HFAP---------- 172 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVA----DI-------HF~~---------- 172 (640)
..+.+..+ ..++++|.+-|=+..|...+ ++++++.|.+.|..+..+. |. +-+|
T Consensus 14 ~~~~~~~l---~~~~~~G~~~vEl~~~~~~~---~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 87 (260)
T 1k77_A 14 EVPFIERF---AAARKAGFDAVEFLFPYNYS---TLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADI 87 (260)
T ss_dssp TSCGGGHH---HHHHHHTCSEEECSCCTTSC---HHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHH
T ss_pred CCCHHHHH---HHHHHhCCCEEEecCCCCCC---HHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHH
Confidence 35666555 45566799999998876544 5667777777777665432 11 1122
Q ss_pred -HHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee-CCCCCcHhHHH
Q 006566 173 -SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMS 249 (640)
Q Consensus 173 -~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv-NhGSLs~ril~ 249 (640)
+....|.+. +..|++.||..... + ..++.++++.+.+.++.+.|+++|+ ||++ ||....
T Consensus 88 ~~~i~~a~~lG~~~v~~~~g~~~~~--------~---~~~~~~~~~~~~l~~l~~~a~~~gv--~l~~E~~~~~~----- 149 (260)
T 1k77_A 88 DLALEYALALNCEQVHVMAGVVPAG--------E---DAERYRAVFIDNIRYAADRFAPHGK--RILVEALSPGV----- 149 (260)
T ss_dssp HHHHHHHHHTTCSEEECCCCBCCTT--------S---CHHHHHHHHHHHHHHHHHHHGGGTC--EEEECCCCTTT-----
T ss_pred HHHHHHHHHcCCCEEEECcCCCCCC--------C---CHHHHHHHHHHHHHHHHHHHHHcCC--EEEEEeCCccC-----
Confidence 112234444 88999999975321 1 1345667889999999999999996 5577 554311
Q ss_pred HhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCC
Q 006566 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (640)
Q Consensus 250 ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn 285 (640)
.|-.++.+.-+..+++++.|-.++-+-+=..+
T Consensus 150 ----~~~~~~~~~~~~~~l~~~~~~~~~g~~~D~~h 181 (260)
T 1k77_A 150 ----KPHYLFSSQYQALAIVEEVARDNVFIQLDTFH 181 (260)
T ss_dssp ----STTBSCCSHHHHHHHHHHHCCTTEEEEEEHHH
T ss_pred ----CCcCccCCHHHHHHHHHHhCCCCEEEEeeHHH
Confidence 01112233345778888888888888876555
No 34
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.00 E-value=0.43 Score=45.34 Aligned_cols=175 Identities=11% Similarity=0.102 Sum_probs=111.3
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceee-------ccCC---C
Q 006566 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA-------DIHF---A 171 (640)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVA-------DIHF---~ 171 (640)
-=|++|=.+..+-.|-+.+.+.+.++.++|++.+++.. .+.++.|++. +++|+++ |.|+ .
T Consensus 7 ~~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~~-----~~~i~~i~~~-----~~~pv~~~~~~~~~~~~~~i~~ 76 (223)
T 1y0e_A 7 LIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRANT-----KEDILAIKET-----VDLPVIGIVKRDYDHSDVFITA 76 (223)
T ss_dssp EEEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEES-----HHHHHHHHHH-----CCSCEEEECBCCCTTCCCCBSC
T ss_pred eEEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccCC-----HHHHHHHHHh-----cCCCEEeeeccCCCccccccCC
Confidence 34788988888889999999999999999999999862 3568888885 6899975 5676 2
Q ss_pred -HHHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHc--CCeEEEeeCCCCCcHhH
Q 006566 172 -PSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY--GRAVRIGTNHGSLSDRI 247 (640)
Q Consensus 172 -~~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~--g~aIRIGvNhGSLs~ri 247 (640)
..-+..+++. ++.|=+.-....+... .+.++++.+|++ |..+ +++..
T Consensus 77 ~~~~i~~~~~~Gad~v~l~~~~~~~p~~---------------------~~~~~i~~~~~~~~~~~v--~~~~~------ 127 (223)
T 1y0e_A 77 TSKEVDELIESQCEVIALDATLQQRPKE---------------------TLDELVSYIRTHAPNVEI--MADIA------ 127 (223)
T ss_dssp SHHHHHHHHHHTCSEEEEECSCSCCSSS---------------------CHHHHHHHHHHHCTTSEE--EEECS------
T ss_pred cHHHHHHHHhCCCCEEEEeeecccCccc---------------------CHHHHHHHHHHhCCCceE--EecCC------
Confidence 3445566666 7777665443322111 256788999998 7766 54321
Q ss_pred HHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEE-----eCC---hhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCC
Q 006566 248 MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMK-----ASN---PVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEG 319 (640)
Q Consensus 248 l~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmK-----sSn---~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~g 319 (640)
|++ .++.+++.|.+=+.++.= ..+ ....++..+.+.+. .+.|+--
T Consensus 128 ------t~~--------e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~-----~~ipvia-------- 180 (223)
T 1y0e_A 128 ------TVE--------EAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQS-----VDAKVIA-------- 180 (223)
T ss_dssp ------SHH--------HHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHH-----CCSEEEE--------
T ss_pred ------CHH--------HHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhh-----CCCCEEE--------
Confidence 322 233467788754432210 011 12234444555444 4677532
Q ss_pred CcceeehHHHHHHHhhhcCCcEEEe
Q 006566 320 EDGRMKSAIGIGTLLQDGLGDTIRV 344 (640)
Q Consensus 320 edGrIKSAiGIG~LL~DGIGDTIRV 344 (640)
+|-|.+.-.+-.++..| -|.+-|
T Consensus 181 -~GGI~~~~~~~~~~~~G-ad~v~v 203 (223)
T 1y0e_A 181 -EGNVITPDMYKRVMDLG-VHCSVV 203 (223)
T ss_dssp -ESSCCSHHHHHHHHHTT-CSEEEE
T ss_pred -ecCCCCHHHHHHHHHcC-CCEEEE
Confidence 47777777888888777 466655
No 35
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=95.81 E-value=0.12 Score=50.42 Aligned_cols=153 Identities=12% Similarity=0.060 Sum_probs=92.9
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh
Q 006566 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 181 (640)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~ 181 (640)
-+|.+||.+-.+ .+.+. .+..+.++|.+-|=+..... .+.++++++.|.+.|..++.+ |..
T Consensus 26 mklg~~~~~~~~-~~~~~---~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~~l~~~gl~v~~~---~~~---------- 86 (287)
T 3kws_A 26 LKLSFQEGIAPG-ESLNE---KLDFMEKLGVVGFEPGGGGL--AGRVNEIKQALNGRNIKVSAI---CAG---------- 86 (287)
T ss_dssp CEEEEETTSSCC-SSHHH---HHHHHHHTTCCEEECBSTTC--GGGHHHHHHHHTTSSCEECEE---ECC----------
T ss_pred eeEEEEecccCC-CCHHH---HHHHHHHcCCCEEEecCCch--HHHHHHHHHHHHHcCCeEEEE---ecC----------
Confidence 356777776554 45554 45566778999999998854 245788888888888877654 332
Q ss_pred cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCe-EEEeeCCCCCcHhHHHHhCCCh---HH
Q 006566 182 FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRA-VRIGTNHGSLSDRIMSYYGDSP---RG 257 (640)
Q Consensus 182 v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~a-IRIGvNhGSLs~ril~ryGdtp---~g 257 (640)
.|+|+.+... +..++..+.++..++.|++.|.+ |++....|..+.+. -++. +.
T Consensus 87 ------~~~~l~~~d~-------------~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~----p~~~~~~~~ 143 (287)
T 3kws_A 87 ------FKGFILSTDP-------------AIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPAL----PHTMETRDF 143 (287)
T ss_dssp ------CCSCTTBSSH-------------HHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBC----CSSHHHHHH
T ss_pred ------CCCcCCCCCH-------------HHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCC----CCHHHHHHH
Confidence 2567665331 12334456688899999999997 55544334322100 0111 44
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEeCC-----hhhHHHHHHHHHHH
Q 006566 258 MVESAFEFARICRKLDFHNFLFSMKASN-----PVVMVQAYRLLVAE 299 (640)
Q Consensus 258 MVeSAle~~~i~e~~~F~diviSmKsSn-----~~~mV~AyRlL~~~ 299 (640)
++++--+.++++++.|. .|.+-.-| .....+....|++.
T Consensus 144 ~~~~l~~l~~~a~~~Gv---~l~lE~~~~~~~~~~~~~~~~~~ll~~ 187 (287)
T 3kws_A 144 LCEQFNEMGTFAAQHGT---SVIFEPLNRKECFYLRQVADAASLCRD 187 (287)
T ss_dssp HHHHHHHHHHHHHHTTC---CEEECCCCTTTCSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC---EEEEEecCcccCcccCCHHHHHHHHHH
Confidence 66666677778888774 56666433 22334555555555
No 36
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=95.69 E-value=0.066 Score=58.25 Aligned_cols=197 Identities=15% Similarity=0.091 Sum_probs=114.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec----CC------HHHHHHHHHHHHHhhc---CC-CCcceeeccCCCHHHHHHHhh
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITV----QG------KREADACFEIKNSLVQ---KN-YNIPLVADIHFAPSVALRVAE 180 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtv----p~------~~~A~~l~~I~~~L~~---~g-~~iPLVADIHF~~~~Al~Aa~ 180 (640)
.|.++.+++++++.++||+|+=|-. |+ .+|.+.+..+.+.|++ .- +++||.-|- |+|.+|.+|++
T Consensus 209 ~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT-~~~~VaeaAL~ 287 (442)
T 3mcm_A 209 FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDT-RKLEVMQKILA 287 (442)
T ss_dssp SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEEC-CCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeC-CCHHHHHHHHh
Confidence 5788999999999999999999975 33 3455554445556665 22 489999996 89999999998
Q ss_pred --h-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhH-HHHhCCChH
Q 006566 181 --C-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRI-MSYYGDSPR 256 (640)
Q Consensus 181 --~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ri-l~ryGdtp~ 256 (640)
+ ++ +-||-=+- .+ ...+.+.|+++|+++=+=-+.|- ++.+ ...|.|--.
T Consensus 288 ~~aGa~-i~INDVsg---~~----------------------d~~m~~v~a~~g~~vVlMh~~G~-P~tmq~~~y~dvv~ 340 (442)
T 3mcm_A 288 KHHDII-WMINDVEC---NN----------------------IEQKAQLIAKYNKKYVIIHNLGI-TDRNQYLDKENAID 340 (442)
T ss_dssp HHGGGC-CEEEECCC---TT----------------------HHHHHHHHHHHTCEEEEECC-----------------C
T ss_pred hCCCCC-EEEEcCCC---CC----------------------ChHHHHHHHHhCCeEEEECCCCC-CccccccCcccHHH
Confidence 3 32 22442111 11 24577888999999865444453 2221 123777667
Q ss_pred HHHHHHHHHHHHHHHCCC--CcEEEE-----EEeCC-hhhHHHHHHHHHHHHHHcCCCcceEEEeecC---CC-----CC
Q 006566 257 GMVESAFEFARICRKLDF--HNFLFS-----MKASN-PVVMVQAYRLLVAEMYVHGWDYPLHLGVTEA---GE-----GE 320 (640)
Q Consensus 257 gMVeSAle~~~i~e~~~F--~diviS-----mKsSn-~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEA---G~-----ge 320 (640)
.+.+...+-++.|++.|. .+|++- -|+.. -..+++..+.|.+. +.||+=+|+.-= |. ..
T Consensus 341 ev~~~l~~~i~~a~~aGI~~~~IilDPGiGF~Kt~~~nl~lL~~l~~l~~~-----lg~PvLvG~SRKsfig~~~~~~~~ 415 (442)
T 3mcm_A 341 NVCDYIEQKKQILLKHGIAQQNIYFDIGFGFGKKSDTARYLLENIIEIKRR-----LELKALVGHSRKPSVLGLTKDSNL 415 (442)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGEEEECCCC------------CCHHHHHHH-----HTSEEEECCTTCTTTTTCCTTCCH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHEEEeCCCCCCCCHHHHHHHHHHHHHHHhh-----CCCcEEEEechHHHHHHHcCCCCh
Confidence 788999999999999999 678764 23321 12334444444443 579999998431 11 12
Q ss_pred cceeehHHHHHHHhhhcCCcEEEe
Q 006566 321 DGRMKSAIGIGTLLQDGLGDTIRV 344 (640)
Q Consensus 321 dGrIKSAiGIG~LL~DGIGDTIRV 344 (640)
+.|.-.++..-++....=.|-|||
T Consensus 416 ~~R~~gt~a~~~~a~~~Ga~ivRv 439 (442)
T 3mcm_A 416 ATLDRATRELSRKLEKLDIDIIRV 439 (442)
T ss_dssp HHHHHHHHHHHHHHTTTTCSEEEE
T ss_pred HHhhHHHHHHHHHHHHCCCCEEec
Confidence 234444444444433333455554
No 37
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=95.42 E-value=0.11 Score=49.63 Aligned_cols=163 Identities=11% Similarity=0.045 Sum_probs=105.4
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceee-ccCC---CH----
Q 006566 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA-DIHF---AP---- 172 (640)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVA-DIHF---~~---- 172 (640)
..++.+|+.+--...+.+.++ ..++++|.+-|=+..+... ...++++++.|.+.|..+..+. ...| ++
T Consensus 4 ~~~lg~~~~~~~~~~~~~~~l---~~~~~~G~~~vEl~~~~~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~ 79 (275)
T 3qc0_A 4 VEGLSINLATIREQCGFAEAV---DICLKHGITAIAPWRDQVA-AIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGRE 79 (275)
T ss_dssp CTTEEEEGGGGTTTCCHHHHH---HHHHHTTCCEEECBHHHHH-HHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHH
T ss_pred cccceeeeeeccCCCCHHHHH---HHHHHcCCCEEEecccccc-ccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHH
Confidence 467899999886667777655 4567789999999876443 4568889999999999877654 1112 33
Q ss_pred -------HHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCc
Q 006566 173 -------SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLS 244 (640)
Q Consensus 173 -------~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs 244 (640)
+....|.+. +..|++.||.+.... ..+++.++++.+.+.++.+.|+++|+.+=|=..|+-..
T Consensus 80 ~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~----------~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~ 149 (275)
T 3qc0_A 80 KAIDDNRRAVDEAAELGADCLVLVAGGLPGGS----------KNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYA 149 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEECBCCCTTC----------CCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGT
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCC----------cCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCccc
Confidence 122234444 899999999765321 12456678899999999999999998664432122100
Q ss_pred HhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChh
Q 006566 245 DRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPV 287 (640)
Q Consensus 245 ~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~ 287 (640)
. -..+..|+ -+..+++++.+- ++-+-+=..+..
T Consensus 150 ~--~~~~~~~~-------~~~~~l~~~~~~-~vg~~~D~~h~~ 182 (275)
T 3qc0_A 150 A--DRACVNTL-------GQALDICETLGP-GVGVAIDVYHVW 182 (275)
T ss_dssp T--TTBSCCCH-------HHHHHHHHHHCT-TEEEEEEHHHHT
T ss_pred C--CccccCCH-------HHHHHHHHHhCc-ccEEEEEhhhhe
Confidence 0 00112343 445567777776 777777666543
No 38
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=94.82 E-value=0.9 Score=48.70 Aligned_cols=198 Identities=13% Similarity=0.171 Sum_probs=131.2
Q ss_pred eeEEEceeecCCCC-ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEe--------cC-------------------
Q 006566 89 RTVMVGNVAIGSEH-PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT--------VQ------------------- 140 (640)
Q Consensus 89 r~V~VG~v~IGG~~-PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvt--------vp------------------- 140 (640)
-..+||+..||+++ |..|==+-..+--|.+-+.+=|....+|||+.||+- +|
T Consensus 14 ~~~~~~~~~ig~~~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~ 93 (385)
T 1vli_A 14 AAFQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLV 93 (385)
T ss_dssp CEEEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHG
T ss_pred hheeECCEEeCCCCCcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHH
Confidence 35789999999985 566666777788899999999999999999999983 22
Q ss_pred -----CHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHh
Q 006566 141 -----GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQ 214 (640)
Q Consensus 141 -----~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele 214 (640)
+.+.-+.|.+.+++ ..+|.++.. ||+..+....++ ++-+-|--+|+.+
T Consensus 94 ~~~~l~~e~~~~L~~~~~~-----~Gi~~~stp-fD~~svd~l~~~~vd~~KIgS~~~~N-------------------- 147 (385)
T 1vli_A 94 QSMEMPAEWILPLLDYCRE-----KQVIFLSTV-CDEGSADLLQSTSPSAFKIASYEINH-------------------- 147 (385)
T ss_dssp GGBSSCGGGHHHHHHHHHH-----TTCEEECBC-CSHHHHHHHHTTCCSCEEECGGGTTC--------------------
T ss_pred HhcCCCHHHHHHHHHHHHH-----cCCcEEEcc-CCHHHHHHHHhcCCCEEEECcccccC--------------------
Confidence 22333444444443 678899887 788888877788 9999999999976
Q ss_pred hhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCC-ChHHHHHHHHHHHHHHHHCCCCcEEEE-EEeCChh----h
Q 006566 215 HIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFS-MKASNPV----V 288 (640)
Q Consensus 215 ~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGd-tp~gMVeSAle~~~i~e~~~F~diviS-mKsSn~~----~ 288 (640)
-||++.+-+.|.||=+-+ |- |. .=++.|.| ++++.|-.||++= +=++=|. +
T Consensus 148 ------~pLL~~va~~gKPViLSt-------------GmaTl-~Ei~~Ave---~i~~~Gn~~iiLlhc~s~YPtp~~~~ 204 (385)
T 1vli_A 148 ------LPLLKYVARLNRPMIFST-------------AGAEI-SDVHEAWR---TIRAEGNNQIAIMHCVAKYPAPPEYS 204 (385)
T ss_dssp ------HHHHHHHHTTCSCEEEEC-------------TTCCH-HHHHHHHH---HHHTTTCCCEEEEEECSSSSCCGGGC
T ss_pred ------HHHHHHHHhcCCeEEEEC-------------CCCCH-HHHHHHHH---HHHHCCCCcEEEEeccCCCCCChhhc
Confidence 368888888999995555 42 33 33344555 4567787787763 2222111 1
Q ss_pred HHHHHHHHHHHHHHcCC-CcceEEEeecCCCCCcceeehHHHHHHHhhhcCCcEEEeecCCC
Q 006566 289 MVQAYRLLVAEMYVHGW-DYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSLTEP 349 (640)
Q Consensus 289 mV~AyRlL~~~m~~~g~-dyPLHLGVTEAG~gedGrIKSAiGIG~LL~DGIGDTIRVSLTed 349 (640)
-+.+...|-++ + ++|+ |..-=..|.-..-..|+.+|+ |-|-+-.|-|
T Consensus 205 nL~aI~~Lk~~-----f~~lpV--G~SdHt~G~~~~~~AAvAlGA-------~iIEkHftld 252 (385)
T 1vli_A 205 NLSVIPMLAAA-----FPEAVI--GFSDHSEHPTEAPCAAVRLGA-------KLIEKHFTID 252 (385)
T ss_dssp CTTHHHHHHHH-----STTSEE--EEEECCSSSSHHHHHHHHTTC-------SEEEEEBCSC
T ss_pred CHHHHHHHHHH-----cCCCCE--EeCCCCCCchHHHHHHHHcCC-------CEEEeCCCcc
Confidence 13333344444 4 5565 774433332344556666665 4666666543
No 39
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=94.79 E-value=0.66 Score=50.17 Aligned_cols=186 Identities=12% Similarity=0.124 Sum_probs=112.7
Q ss_pred eEEEceeecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceeec
Q 006566 90 TVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVAD 167 (640)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVAD 167 (640)
.|+|=++++=.+. | +......++.-++=+++|.++|.+.|=++.| +.++++.++.|.+. +.+..+.+=
T Consensus 39 ~V~I~DtTLRDG~----Q--~~~~~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~~~----~~~~~v~~~ 108 (423)
T 3ivs_A 39 NFSIIESTLREGE----Q--FANAFFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAICKL----GLKCKILTH 108 (423)
T ss_dssp SCEEEECTTTGGG----G--STTCCCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTS----CCSSEEEEE
T ss_pred cEEEEECCCCCCC----C--CCCCCcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHHhc----CCCCEEEEe
Confidence 4777666553322 1 1223456788899999999999999999977 46778888888763 444444432
Q ss_pred cCCCHHHHHHHhhh-cCceeeC-CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcH
Q 006566 168 IHFAPSVALRVAEC-FDKIRVN-PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245 (640)
Q Consensus 168 IHF~~~~Al~Aa~~-v~KVRIN-PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ 245 (640)
.--+.+-...|+++ ++.|+|- |-.=...+ ..+...++.+.+.+.+.|+.||++|..+|.+.--+
T Consensus 109 ~r~~~~di~~A~~aG~~~V~i~~s~Sd~~~~----------~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda---- 174 (423)
T 3ivs_A 109 IRCHMDDARVAVETGVDGVDVVIGTSQYLRK----------YSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDS---- 174 (423)
T ss_dssp EESCHHHHHHHHHTTCSEEEEEEEC-----------------------CHHHHHHHHHHHHHHTTTCEEEEEEESG----
T ss_pred eccChhhHHHHHHcCCCEEEEEeeccHHHHH----------HHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccC----
Confidence 22344445667777 8888862 32211111 11334566777888999999999999998875221
Q ss_pred hHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEE
Q 006566 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311 (640)
Q Consensus 246 ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHL 311 (640)
|..+|+- +++.++.+.+.|-+ .|+++.+.=..+=..+..+++.+.+. .+-||++
T Consensus 175 -----~r~d~~~----~~~v~~~~~~~Ga~--~i~l~DTvG~~~P~~v~~lv~~l~~~-~~~~i~~ 228 (423)
T 3ivs_A 175 -----FRSDLVD----LLSLYKAVDKIGVN--RVGIADTVGCATPRQVYDLIRTLRGV-VSCDIEC 228 (423)
T ss_dssp -----GGSCHHH----HHHHHHHHHHHCCS--EEEEEETTSCCCHHHHHHHHHHHHHH-CSSEEEE
T ss_pred -----cCCCHHH----HHHHHHHHHHhCCC--ccccCCccCcCCHHHHHHHHHHHHhh-cCCeEEE
Confidence 2235544 35677777788877 48888876444444455555554432 3445543
No 40
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=94.72 E-value=0.15 Score=52.15 Aligned_cols=147 Identities=17% Similarity=0.239 Sum_probs=94.4
Q ss_pred eEEEceeecCCCCce-EEEeccCCCCCCHHHHHHHHHHHHHcCCCE-----EEE-------ecCC-HH---HHHHHHHHH
Q 006566 90 TVMVGNVAIGSEHPI-RVQTMTTNDTKDVAGTVEEVMRIADQGADL-----VRI-------TVQG-KR---EADACFEIK 152 (640)
Q Consensus 90 ~V~VG~v~IGG~~PI-~VQSMt~t~T~Dv~atv~Qi~rl~~aGcei-----VRv-------tvp~-~~---~A~~l~~I~ 152 (640)
.|.||++.+|+++|+ .|= --.+-.|.+.+.+-++++.++|+++ .|. |.+. .+ --+.|+.++
T Consensus 2 ~i~i~~~~iG~~~~~~vIA--Gpc~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~~~~g~~l~~gl~~l~ 79 (280)
T 2qkf_A 2 DIKINDITLGNNSPFVLFG--GINVLESLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFE 79 (280)
T ss_dssp CEEETTEEESTTSCCEEEE--EEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCSSCSSSSSCCCSCHHHHHHHHH
T ss_pred ceEeCCEEECCCCceEEEE--ecCCCCCHHHHHHHHHHHHHhhhhcceeEEEeeeeecCCCCChHHhhccchHHHHHHHH
Confidence 578999999999854 555 4446679999999999999987443 331 2231 11 133344444
Q ss_pred HHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCC
Q 006566 153 NSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232 (640)
Q Consensus 153 ~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~ 232 (640)
+-. +...+|++.++|= |.-+...++.++-+-|--+|+-+ .+|++.+-..|.
T Consensus 80 ~~~--~~~Gl~~~te~~d-~~~~~~l~~~~d~~kIga~~~~n--------------------------~~ll~~~a~~~k 130 (280)
T 2qkf_A 80 KVK--AEFGIPVITDVHE-PHQCQPVAEVCDVIQLPAFLARQ--------------------------TDLVVAMAKTGN 130 (280)
T ss_dssp HHH--HHHCCCEEEECCS-GGGHHHHHHHCSEEEECGGGTTB--------------------------HHHHHHHHHTCC
T ss_pred HHH--HHcCCcEEEecCC-HHHHHHHHhhCCEEEECcccccC--------------------------HHHHHHHHcCCC
Confidence 322 2377999999974 55555556778889888877755 236676778899
Q ss_pred eEEEeeCCCCCcHhHHHHhCC-ChHHHHHHHHHHHHHHHHCCCCcEEEEEEe
Q 006566 233 AVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMKA 283 (640)
Q Consensus 233 aIRIGvNhGSLs~ril~ryGd-tp~gMVeSAle~~~i~e~~~F~diviSmKs 283 (640)
||=+=+ |- + |++.|..+ ++++++.|=.++++-.--
T Consensus 131 PV~lk~--G~----------~~t~~e~~~A----~~~i~~~Gn~~i~L~~rg 166 (280)
T 2qkf_A 131 VVNIKK--PQ----------FLSPSQMKNI----VEKFHEAGNGKLILCERG 166 (280)
T ss_dssp EEEEEC--CT----------TSCGGGHHHH----HHHHHHTTCCCEEEEECC
T ss_pred cEEEEC--CC----------CCCHHHHHHH----HHHHHHcCCCeEEEEECC
Confidence 993333 21 2 45555444 456777887777765433
No 41
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=94.65 E-value=1 Score=45.76 Aligned_cols=171 Identities=16% Similarity=0.111 Sum_probs=104.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec-------CCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCce
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITV-------QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKI 185 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtv-------p~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KV 185 (640)
..+++.-++=+++|.++|.+.|=+.. |-+.+++ ++.+.+.+. -++|+.+=. -+.+-...|+++ ++.|
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~---~~~~~~~~~-~~~~~~~l~-~~~~~i~~a~~aG~~~v 100 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSA---EVFAGIRQR-PGVTYAALA-PNLKGFEAALESGVKEV 100 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHH---HHHHHSCCC-TTSEEEEEC-CSHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHH---HHHHHhhhc-CCCEEEEEe-CCHHHHHHHHhCCcCEE
Confidence 46788888899999999999999984 3333333 233344432 567776544 377788889998 9999
Q ss_pred ee-CCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCC-CCCcHhHHHHhCC-ChHHHHHHH
Q 006566 186 RV-NPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH-GSLSDRIMSYYGD-SPRGMVESA 262 (640)
Q Consensus 186 RI-NPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNh-GSLs~ril~ryGd-tp~gMVeSA 262 (640)
+| .+-+=...++++ .. -++..-+.++++|+.||++|..++..+-. ++-++. |. +| +-+
T Consensus 101 ~i~~~~s~~~~~~~~---~~-------s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~-----~~~~~----~~~ 161 (302)
T 2ftp_A 101 AVFAAASEAFSQRNI---NC-------SIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYD-----GDVDP----RQV 161 (302)
T ss_dssp EEEEESCHHHHHHHH---SS-------CHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTT-----BCCCH----HHH
T ss_pred EEEEecCHHHHHHHh---CC-------CHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcC-----CCCCH----HHH
Confidence 97 444321111111 11 23344456778999999999999843322 333321 22 44 567
Q ss_pred HHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCC-CcceEE
Q 006566 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW-DYPLHL 311 (640)
Q Consensus 263 le~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~-dyPLHL 311 (640)
+++++.+.+.|-+-| +++.+.=..+=+.+..+++.+.+. + +-||++
T Consensus 162 ~~~~~~~~~~G~d~i--~l~DT~G~~~P~~~~~lv~~l~~~-~~~~~l~~ 208 (302)
T 2ftp_A 162 AWVARELQQMGCYEV--SLGDTIGVGTAGATRRLIEAVASE-VPRERLAG 208 (302)
T ss_dssp HHHHHHHHHTTCSEE--EEEESSSCCCHHHHHHHHHHHTTT-SCGGGEEE
T ss_pred HHHHHHHHHcCCCEE--EEeCCCCCcCHHHHHHHHHHHHHh-CCCCeEEE
Confidence 888888889998854 455554333344444455554332 4 456644
No 42
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=94.41 E-value=0.14 Score=52.67 Aligned_cols=147 Identities=14% Similarity=0.147 Sum_probs=96.1
Q ss_pred eeEEEceeecCCCCce-EEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEE------------ecC-CHH---HHHHHHHH
Q 006566 89 RTVMVGNVAIGSEHPI-RVQTMTTNDTKDVAGTVEEVMRIADQGADLVRI------------TVQ-GKR---EADACFEI 151 (640)
Q Consensus 89 r~V~VG~v~IGG~~PI-~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRv------------tvp-~~~---~A~~l~~I 151 (640)
..|.||++.+|+++|+ .|=- -..-.|.+..++-++++.++|+++++. |.+ +.+ --+.|+.+
T Consensus 4 ~~i~i~~~~iG~~~~~~vIAG--pc~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~sf~g~~l~~gl~~l 81 (292)
T 1o60_A 4 KIVKIGNIDVANDKPFVLFGG--MNVLESRDMAMQVCEAYVKVTEKLGVPYVFKASFDKANRSSIHSYRGPGMEEGLKIF 81 (292)
T ss_dssp CCEEETTEEECTTSCCEEEEE--EEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHH
T ss_pred cEEEECCEEECCCCceEEEEe--cCCccCHHHHHHHHHHHHHHhhhhCEeEEEhhhcccCCCCChHHhhhhhHHHHHHHH
Confidence 3589999999999854 4443 446679999999999999987654332 222 111 13344444
Q ss_pred HHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcC
Q 006566 152 KNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG 231 (640)
Q Consensus 152 ~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g 231 (640)
++-.+ ...+|++.++|= |.-+..+++.++-+-|--+|+-+ .+|++.+-+.|
T Consensus 82 ~~~~~--~~Glp~~te~~d-~~~~~~l~~~vd~~kIgA~~~~n--------------------------~~Ll~~~a~~~ 132 (292)
T 1o60_A 82 QELKD--TFGVKIITDVHE-IYQCQPVADVVDIIQLPAFLARQ--------------------------TDLVEAMAKTG 132 (292)
T ss_dssp HHHHH--HHCCEEEEECCS-GGGHHHHHTTCSEEEECGGGTTC--------------------------HHHHHHHHHTT
T ss_pred HHHHH--HcCCcEEEecCC-HHHHHHHHhcCCEEEECcccccC--------------------------HHHHHHHHcCC
Confidence 44322 377999999974 55555555788889998888865 23666666889
Q ss_pred CeEEEeeCCCCCcHhHHHHhCC-ChHHHHHHHHHHHHHHHHCCCCcEEEEEE
Q 006566 232 RAVRIGTNHGSLSDRIMSYYGD-SPRGMVESAFEFARICRKLDFHNFLFSMK 282 (640)
Q Consensus 232 ~aIRIGvNhGSLs~ril~ryGd-tp~gMVeSAle~~~i~e~~~F~diviSmK 282 (640)
.||=+=+ |- + |++.|..+ +++++..|=.++++-.-
T Consensus 133 kPV~lk~--G~----------~~t~~ei~~A----v~~i~~~Gn~~i~L~~r 168 (292)
T 1o60_A 133 AVINVKK--PQ----------FLSPSQMGNI----VEKIEECGNDKIILCDR 168 (292)
T ss_dssp CEEEEEC--CT----------TSCGGGHHHH----HHHHHHTTCCCEEEEEC
T ss_pred CcEEEeC--CC----------CCCHHHHHHH----HHHHHHcCCCeEEEEEC
Confidence 9993333 21 2 45555444 45677888778777654
No 43
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=94.39 E-value=0.15 Score=48.70 Aligned_cols=155 Identities=12% Similarity=0.090 Sum_probs=97.5
Q ss_pred eEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEe-cCCHH---HHHHHHHHHHHhhcCCCCcc-eeeccCC---CHH--
Q 006566 104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT-VQGKR---EADACFEIKNSLVQKNYNIP-LVADIHF---APS-- 173 (640)
Q Consensus 104 I~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvt-vp~~~---~A~~l~~I~~~L~~~g~~iP-LVADIHF---~~~-- 173 (640)
+.+++.+-....+.+..++. +.++|.+-|-+. ..... +...++++++.|.+.|..+. +-+...| ++.
T Consensus 3 lg~~~~~~~~~~~~~~~l~~---~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 79 (278)
T 1i60_A 3 LCFNEATTLENSNLKLDLEL---CEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGH 79 (278)
T ss_dssp EEEEGGGGTTTCCHHHHHHH---HHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHH
T ss_pred eEechhhcccCCCHHHHHHH---HHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHH
Confidence 45666663344666665554 567899999999 65432 12456778888888887765 2222223 231
Q ss_pred ---------HHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee-CCCC
Q 006566 174 ---------VALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGS 242 (640)
Q Consensus 174 ---------~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv-NhGS 242 (640)
....|.+. +..|++.||.... .++ +.+.++++.+.+.++.+.|+++|+ +|++ ||+.
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~--------~~~---~~~~~~~~~~~l~~l~~~a~~~gv--~l~lEn~~~ 146 (278)
T 1i60_A 80 NEIITEFKGMMETCKTLGVKYVVAVPLVTEQ--------KIV---KEEIKKSSVDVLTELSDIAEPYGV--KIALEFVGH 146 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECCBCSS--------CCC---HHHHHHHHHHHHHHHHHHHGGGTC--EEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCCCC--------CCC---HHHHHHHHHHHHHHHHHHHHhcCC--EEEEEecCC
Confidence 12234445 8899998886432 112 345667888999999999999997 4566 5542
Q ss_pred CcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCCh
Q 006566 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286 (640)
Q Consensus 243 Ls~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~ 286 (640)
-.. +..| .-+..+++++.|-.++-+-+=..|.
T Consensus 147 ~~~-----~~~~-------~~~~~~l~~~~~~~~~g~~~D~~h~ 178 (278)
T 1i60_A 147 PQC-----TVNT-------FEQAYEIVNTVNRDNVGLVLDSFHF 178 (278)
T ss_dssp TTB-----SSCS-------HHHHHHHHHHHCCTTEEEEEEHHHH
T ss_pred ccc-----hhcC-------HHHHHHHHHHhCCCCeeEEEEeEEE
Confidence 210 2334 3456778888888888887765553
No 44
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=94.28 E-value=0.14 Score=53.35 Aligned_cols=162 Identities=17% Similarity=0.160 Sum_probs=101.0
Q ss_pred CCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH-------HH-HHHHHHHHHHhhcCCCCcceeeccC--
Q 006566 100 SEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK-------RE-ADACFEIKNSLVQKNYNIPLVADIH-- 169 (640)
Q Consensus 100 G~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~-------~~-A~~l~~I~~~L~~~g~~iPLVADIH-- 169 (640)
|..|+.+.|. .-.+. .+.+..++++|++-|=+...+. .+ .+.++++++.|.+.|..+..++=.+
T Consensus 21 ~~~~~g~~t~---~~~~l---~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~ 94 (394)
T 1xla_A 21 GADPFGVATR---KNLDP---VEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFS 94 (394)
T ss_dssp CCBTTBCCSS---CCCCH---HHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCEEECCCSS
T ss_pred CCCCCccccC---CccCH---HHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEEEecCccC
Confidence 4466655432 22344 4456667788999998886321 11 4678889999999999988775322
Q ss_pred --------C---CHH-----------HHHHHhhh-cCceeeCCCCCCchhhhccccccc-hHHHHHHHhhhHhhHHHHHH
Q 006566 170 --------F---APS-----------VALRVAEC-FDKIRVNPGNFADRRAQFEQLEYT-DDEYQKELQHIEEVFSPLVE 225 (640)
Q Consensus 170 --------F---~~~-----------~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYt-deeY~~Ele~I~~~f~~lV~ 225 (640)
| ++. ....|.+. ++.|++.||..+. .|. +..+.+.++++.+.+.++.+
T Consensus 95 ~p~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~G~~g~--------~~~~~~~~~~~~~~~~e~L~~l~~ 166 (394)
T 1xla_A 95 HPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGS--------EYDGSKDLAAALDRMREGVDTAAG 166 (394)
T ss_dssp SGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTCEE--------SSGGGCCHHHHHHHHHHHHHHHHH
T ss_pred CccccCCccCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCcc--------ccccccCHHHHHHHHHHHHHHHHH
Confidence 2 221 11133344 8899999995432 111 22356788999999999999
Q ss_pred HHHHcCCeEEEee-CCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCc-EEEEEEeC
Q 006566 226 KCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHN-FLFSMKAS 284 (640)
Q Consensus 226 ~~Ke~g~aIRIGv-NhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~d-iviSmKsS 284 (640)
.|+++|..|||++ ||..- . +| ...+.+.-+.++++++.|-.| +-+-+=..
T Consensus 167 ~A~~~G~~v~l~lE~~~~e-~----~~----~~~~~t~~~~~~li~~v~~pn~vgl~lD~~ 218 (394)
T 1xla_A 167 YIKDKGYNLRIALEPKPNE-P----RG----DIFLPTVGHGLAFIEQLEHGDIVGLNPETG 218 (394)
T ss_dssp HHHHHTCCCEEEECCCSSS-S----SS----EESSCSHHHHHHHHTTCTTGGGEEECCBHH
T ss_pred HHHhcCCCeEEEEecCCCC-C----Cc----cccCCCHHHHHHHHHHhCCCCceEEEEecC
Confidence 9999996677787 44211 0 11 112233445667788888775 66655443
No 45
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=94.21 E-value=0.81 Score=44.34 Aligned_cols=146 Identities=12% Similarity=0.021 Sum_probs=89.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC----H----------HHHH-HH
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA----P----------SVAL-RV 178 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~----~----------~~Al-~A 178 (640)
..+.+..++ .++++|++-|=+..+.. .++++++.|.+.|..+..+ ||. | +-++ .|
T Consensus 30 ~~~~~~~l~---~~~~~G~~~vEl~~~~~----~~~~~~~~l~~~gl~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~a 99 (301)
T 3cny_A 30 DNNLQQLLS---DIVVAGFQGTEVGGFFP----GPEKLNYELKLRNLEIAGQ---WFSSYIIRDGIEKASEAFEKHCQYL 99 (301)
T ss_dssp TCCHHHHHH---HHHHHTCCEECCCTTCC----CHHHHHHHHHHTTCEECEE---EEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHH---HHHHhCCCEEEecCCCC----CHHHHHHHHHHCCCeEEEE---eccCCCChhhHHHHHHHHHHHHHHH
Confidence 345665555 45567999887774432 4667888888888887765 553 2 1122 33
Q ss_pred hhh-cCceeeCCCCC---CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee-CCCCCcHhHHHHhCC
Q 006566 179 AEC-FDKIRVNPGNF---ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYGD 253 (640)
Q Consensus 179 a~~-v~KVRINPGN~---~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv-NhGSLs~ril~ryGd 253 (640)
.+. +..|++.|+.+ |.....|...... ..++.++++.+.+.++.+.|+++|+ +|++ ||.. .+..
T Consensus 100 ~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~a~~~gv--~l~lE~~~~-------~~~~ 168 (301)
T 3cny_A 100 KAINAPVAVVSEQTYTIQRSDTANIFKDKPY--FTDKEWDEVCKGLNHYGEIAAKYGL--KVAYHHHMG-------TGIQ 168 (301)
T ss_dssp HHTTCCEEEEEECTTCCTTCSSCCTTTCCCC--CCHHHHHHHHHHHHHHHHHHHHTTC--EEEEECCTT-------SSSC
T ss_pred HHcCCCEEEecCCCccccCcccCCccccccc--CcHHHHHHHHHHHHHHHHHHHHcCC--EEEEecCCC-------cccC
Confidence 344 88899988432 1100011100000 0244567888899999999999997 4566 5521 1223
Q ss_pred ChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChh
Q 006566 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPV 287 (640)
Q Consensus 254 tp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~ 287 (640)
|+ -+..+++++.|-.++-+-+=..+..
T Consensus 169 ~~-------~~~~~l~~~~~~~~vg~~~D~~h~~ 195 (301)
T 3cny_A 169 TK-------EETDRLMANTDPKLVGLLYDTGHIA 195 (301)
T ss_dssp SH-------HHHHHHHHTSCTTTCEEEEEHHHHH
T ss_pred CH-------HHHHHHHHhCCccceeEEechHHHH
Confidence 44 4677888999888888887666543
No 46
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=94.06 E-value=0.11 Score=54.69 Aligned_cols=112 Identities=14% Similarity=0.078 Sum_probs=86.2
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALR 177 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~ 177 (640)
+|.+-+|+|=- | ..-+.+.+++-+++|.+.|.+.+==-+| .+.+.+++|+++|+++|+++|+++|=-+++.-+..
T Consensus 198 ~g~d~~l~vDa--n-~~~~~~~ai~~~~~l~~~~i~~iE~P~~--~d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~ 272 (392)
T 3p3b_A 198 AGPAGKIMIDA--N-NAYNLNLTKEVLAALSDVNLYWLEEAFH--EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIE 272 (392)
T ss_dssp HCTTCCEEEEC--T-TCCCHHHHHHHHHHTTTSCEEEEECSSS--CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHHhcCCCEEecCCc--ccHHHHHHHHHhhccCCCCccEEecCCCCHHHHHH
Confidence 57788888721 2 2346788888888898888776544344 67888899999888888999999998556777777
Q ss_pred Hhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 178 VAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 178 Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
+++. ++-|.|.|... .-. ....+++.|+++|+++=+|
T Consensus 273 ~i~~~~~d~v~ik~~~~-Git----------------------~~~~i~~~A~~~gi~~~~h 311 (392)
T 3p3b_A 273 WATRGRVDVLQYDIIWP-GFT----------------------HWMELGEKLDAHGLRSAPH 311 (392)
T ss_dssp HHHTTSCCEECCBTTTB-CHH----------------------HHHHHHHHHHHTTCEECCB
T ss_pred HHHcCCCCEEEeCcccc-CHH----------------------HHHHHHHHHHHcCCEEEec
Confidence 7754 99999999988 422 2678999999999998665
No 47
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=94.04 E-value=0.32 Score=50.53 Aligned_cols=107 Identities=8% Similarity=0.050 Sum_probs=83.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-||+|= .| ..-|.+.+++-+++|.+.|. ++ .-|-. +.+.+++|+++ +++|+++|=.+ ++.-+.
T Consensus 186 ~g~d~~l~vD--an-~~~~~~~a~~~~~~l~~~~i-~i--E~P~~-~~~~~~~l~~~-----~~iPI~~de~i~~~~~~~ 253 (379)
T 2rdx_A 186 LEPGEKAMAD--AN-QGWRVDNAIRLARATRDLDY-IL--EQPCR-SYEECQQVRRV-----ADQPMKLDECVTGLHMAQ 253 (379)
T ss_dssp SCTTCEEEEE--CT-TCSCHHHHHHHHHHTTTSCC-EE--ECCSS-SHHHHHHHHTT-----CCSCEEECTTCCSHHHHH
T ss_pred cCCCCEEEEE--CC-CCCCHHHHHHHHHHHHhCCe-EE--eCCcC-CHHHHHHHHhh-----CCCCEEEeCCcCCHHHHH
Confidence 6778888873 12 33577888888899999998 65 43433 77788888874 78999999654 688888
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.+++. +|-|.|.|+..|.-.. +..+...|+++|+++=+|.
T Consensus 254 ~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~g~~~~~~~ 295 (379)
T 2rdx_A 254 RIVADRGAEICCLKISNLGGLSK----------------------ARRTRDFLIDNRMPVVAED 295 (379)
T ss_dssp HHHHHTCCSEEEEETTTTTSHHH----------------------HHHHHHHHHHTTCCEEEEC
T ss_pred HHHHcCCCCEEEEeccccCCHHH----------------------HHHHHHHHHHcCCeEEEee
Confidence 77665 9999999999988443 7789999999999997773
No 48
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=94.03 E-value=1 Score=45.00 Aligned_cols=104 Identities=10% Similarity=0.123 Sum_probs=64.6
Q ss_pred ceEEEeccCCCC---CCHH---HHHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHHhhcCCCC---cceeec
Q 006566 103 PIRVQTMTTNDT---KDVA---GTVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYN---IPLVAD 167 (640)
Q Consensus 103 PI~VQSMt~t~T---~Dv~---atv~Qi~rl~~aGceiVRvtvp~~~------~A~~l~~I~~~L~~~g~~---iPLVAD 167 (640)
+|-+++++-+.. .+.+ ..++.+..++++|.+-|=+...... +.+.+.++++.|.+.|.. +.-+
T Consensus 10 klg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~~-- 87 (335)
T 2qw5_A 10 DIYISFFMFTTNLQPDNLDYRRIVVAHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKISTN-- 87 (335)
T ss_dssp CEEEEGGGTCSCCCTTCHHHHHHHHHHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEEE--
T ss_pred ceeEEEeeecCCCChhhhhccchHHHHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEEE--
Confidence 356666653321 2233 3346777888999999999876431 126677888888888877 5543
Q ss_pred cCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 168 IHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 168 IHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.||.+. .|+.+... +..++..+.++..++.|++.|...=+|
T Consensus 88 ~~~~~~----------------~~l~~~d~-------------~~r~~~~~~~~~~i~~A~~lG~~~v~~ 128 (335)
T 2qw5_A 88 VGATRT----------------FDPSSNYP-------------EQRQEALEYLKSRVDITAALGGEIMMG 128 (335)
T ss_dssp CCCCSS----------------SCTTCSSH-------------HHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred eccCCC----------------CCCCCCCH-------------HHHHHHHHHHHHHHHHHHHcCCCEEec
Confidence 577431 34443211 112334456888999999999986455
No 49
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=94.02 E-value=1.4 Score=44.61 Aligned_cols=173 Identities=9% Similarity=0.042 Sum_probs=105.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec-------CCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCce
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITV-------QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKI 185 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtv-------p~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KV 185 (640)
...++.-++=+.+|.++|.++|=++. |-+.+.+ ++.+.+++. -++++.+.. -+.+-+..|+++ ++.|
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~---~~~~~~~~~-~~~~~~~l~-~~~~~i~~a~~ag~~~v 97 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHT---EVLKGIQKF-PGINYPVLT-PNLKGFEAAVAAGAKEV 97 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHH---HHHHHSCCC-TTCBCCEEC-CSHHHHHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHH---HHHHHHhhC-CCCEEEEEc-CCHHhHHHHHHCCCCEE
Confidence 36788889999999999999999985 4444443 344444442 245665655 477777888888 9999
Q ss_pred eeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC-CCCCcHhHHHHhCC-ChHHHHHHHH
Q 006566 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN-HGSLSDRIMSYYGD-SPRGMVESAF 263 (640)
Q Consensus 186 RINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN-hGSLs~ril~ryGd-tp~gMVeSAl 263 (640)
||- +-.-+. |.. .-+..-.+..-+++.+.++.||++|..+++.+- .-|-++. |. +| +-.+
T Consensus 98 ~i~-~~~sd~---~~~-----~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~-----~~~~~----~~~~ 159 (298)
T 2cw6_A 98 VIF-GAASEL---FTK-----KNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYE-----GKISP----AKVA 159 (298)
T ss_dssp EEE-EESCHH---HHH-----HHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTT-----BSCCH----HHHH
T ss_pred EEE-ecCCHH---HHH-----HHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcC-----CCCCH----HHHH
Confidence 972 111111 100 001112344455678899999999999987663 1122211 22 34 4566
Q ss_pred HHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEE
Q 006566 264 EFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311 (640)
Q Consensus 264 e~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHL 311 (640)
+.++.+.+.|-+ .|+++-+.=..+-..++.+++.+.++--+.|+++
T Consensus 160 ~~~~~~~~~Ga~--~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~ 205 (298)
T 2cw6_A 160 EVTKKFYSMGCY--EISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAV 205 (298)
T ss_dssp HHHHHHHHTTCS--EEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEE
T ss_pred HHHHHHHHcCCC--EEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEE
Confidence 778888899987 4667766544445555555555544311345543
No 50
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=93.97 E-value=5.6 Score=40.93 Aligned_cols=224 Identities=14% Similarity=0.176 Sum_probs=137.7
Q ss_pred eEEEceeecCCCCceEEEeccCCCCC--C---HHHHHHHHHHHHHcCCCEEEEe---c-------------CCHHHHHHH
Q 006566 90 TVMVGNVAIGSEHPIRVQTMTTNDTK--D---VAGTVEEVMRIADQGADLVRIT---V-------------QGKREADAC 148 (640)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T~--D---v~atv~Qi~rl~~aGceiVRvt---v-------------p~~~~A~~l 148 (640)
.++||++.+ .|+|..-.|+..... | ++..++--.+.++-||-+|=.- + -+.+..+.+
T Consensus 8 p~~ig~~~l--~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~ 85 (338)
T 1z41_A 8 PITIKDMTL--KNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGF 85 (338)
T ss_dssp CEEETTEEE--SSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHH
T ss_pred CeeECCEEE--cCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHH
Confidence 478888888 799999999976532 3 6777888888888888877221 1 133556788
Q ss_pred HHHHHHhhcCCCCcceeeccC------------------------CCH----------------HHHHHHhhh-cCceee
Q 006566 149 FEIKNSLVQKNYNIPLVADIH------------------------FAP----------------SVALRVAEC-FDKIRV 187 (640)
Q Consensus 149 ~~I~~~L~~~g~~iPLVADIH------------------------F~~----------------~~Al~Aa~~-v~KVRI 187 (640)
+++.+..++.|. |+++=++ ..| ++|..|.++ +|-|-|
T Consensus 86 ~~~~~~vh~~g~--~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVei 163 (338)
T 1z41_A 86 AKLTEQVKEQGS--KIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEI 163 (338)
T ss_dssp HHHHHHHHHTTC--EEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCC--EEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEe
Confidence 888887787775 4444432 234 456677777 999999
Q ss_pred CCCC-C-----CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHH
Q 006566 188 NPGN-F-----ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261 (640)
Q Consensus 188 NPGN-~-----~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeS 261 (640)
|.|| | -++.-+-...+|-- ......+.+.|.++.+.+.+ ..-+.+||..+.. .. -|.++ +.
T Consensus 164 h~~~gyLl~qFlsp~~n~R~d~yGG-slenr~r~~~eiv~avr~~v-~~pv~vris~~~~-~~------~g~~~----~~ 230 (338)
T 1z41_A 164 HAAHGYLIHEFLSPLSNHRTDEYGG-SPENRYRFLREIIDEVKQVW-DGPLFVRVSASDY-TD------KGLDI----AD 230 (338)
T ss_dssp EECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCC-ST------TSCCH----HH
T ss_pred ccccchHHHHccCCCcCCcCcccCc-chhhhHHHHHHHHHHHHHHc-CCcEEEEecCccc-CC------CCCCH----HH
Confidence 9886 1 01100001122321 13333444555555555555 5567778876421 11 14443 46
Q ss_pred HHHHHHHHHHCCCCcEEEEEEe-------CChhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHHHHHHHh
Q 006566 262 AFEFARICRKLDFHNFLFSMKA-------SNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLL 334 (640)
Q Consensus 262 Ale~~~i~e~~~F~diviSmKs-------Sn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAiGIG~LL 334 (640)
+.++++.+++.|.+-+.+|--. +.+...+...+.+.+. ++-|+-. .|.|.+.-..-.+|
T Consensus 231 ~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~-----~~iPVi~---------~Ggi~s~~~a~~~l 296 (338)
T 1z41_A 231 HIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQ-----ADMATGA---------VGMITDGSMAEEIL 296 (338)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-----HCCEEEE---------CSSCCSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHH-----CCCCEEE---------ECCCCCHHHHHHHH
Confidence 7889999999999988887521 1111223333444444 4556532 26777888888889
Q ss_pred hhcCCcEEEe
Q 006566 335 QDGLGDTIRV 344 (640)
Q Consensus 335 ~DGIGDTIRV 344 (640)
.+|--|-|-+
T Consensus 297 ~~G~aD~V~i 306 (338)
T 1z41_A 297 QNGRADLIFI 306 (338)
T ss_dssp HTTSCSEEEE
T ss_pred HcCCceEEee
Confidence 8887787665
No 51
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=93.76 E-value=0.36 Score=50.53 Aligned_cols=111 Identities=13% Similarity=0.118 Sum_probs=85.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-||+|=- | ..-+.+.+++-+++|.+.|.+++==-++ ..+.+.+++++++ +++|+++|=.+ ++.-+.
T Consensus 191 ~G~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 261 (391)
T 2qgy_A 191 VGDELPLMLDL--A-VPEDLDQTKSFLKEVSSFNPYWIEEPVD-GENISLLTEIKNT-----FNMKVVTGEKQSGLVHFR 261 (391)
T ss_dssp HCSSSCEEEEC--C-CCSCHHHHHHHHHHHGGGCCSEEECSSC-TTCHHHHHHHHHH-----CSSCEEECTTCCSHHHHH
T ss_pred hCCCCEEEEEc--C-CCCCHHHHHHHHHHHHhcCCCeEeCCCC-hhhHHHHHHHHhh-----CCCCEEEcCCcCCHHHHH
Confidence 57778888721 1 2356888999999999999998753333 2567788888885 68999999665 678888
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
.+++. ++-|.|.|+..|.-.. +..+++.|+++|+++=+|..
T Consensus 262 ~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 262 ELISRNAADIFNPDISGMGGLID----------------------IIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp HHHHTTCCSEECCBTTTSSCHHH----------------------HHHHHHHHHHTTCEECCBCC
T ss_pred HHHHcCCCCEEEECcchhCCHHH----------------------HHHHHHHHHHCCCEEeccCC
Confidence 87754 9999999999988543 77899999999999866654
No 52
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=93.74 E-value=0.43 Score=46.37 Aligned_cols=135 Identities=10% Similarity=0.101 Sum_probs=85.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCHH--HHHHHHHHHHHhhcCCCCcceeeccCC------------------CH-
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQGKR--EADACFEIKNSLVQKNYNIPLVADIHF------------------AP- 172 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~--~A~~l~~I~~~L~~~g~~iPLVADIHF------------------~~- 172 (640)
..+++. .+.+++++|.+-|=+..+... +.+.++++++.|.+.|..+..++ .|| +|
T Consensus 20 ~~~l~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~ 95 (290)
T 3tva_A 20 DAGLGV---HLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIF-GGFDGESYADIPTTARTVGLVPLE 95 (290)
T ss_dssp SSSSSB---CHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEE-CCCTTCCCSSHHHHHHHSSSCSTT
T ss_pred CCCHHH---HHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEe-eccCCcccccccccccccCCCCHH
Confidence 455554 456677789999999987653 35668888888889898877663 121 22
Q ss_pred ----------HHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee-CC
Q 006566 173 ----------SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NH 240 (640)
Q Consensus 173 ----------~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv-Nh 240 (640)
+....|.+. +..|++.||..... +.+.++++.+.+.++.+.|+++|+.+ ++ ||
T Consensus 96 ~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~-------------~~~~~~~~~~~l~~l~~~a~~~Gv~l--~lE~~ 160 (290)
T 3tva_A 96 TRASRVAEMKEISDFASWVGCPAIGLHIGFVPES-------------SSPDYSELVRVTQDLLTHAANHGQAV--HLETG 160 (290)
T ss_dssp THHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCT-------------TSHHHHHHHHHHHHHHHHHHTTTCEE--EEECC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCccc-------------chHHHHHHHHHHHHHHHHHHHcCCEE--EEecC
Confidence 112233334 78888888854321 22345677778888888888888754 44 23
Q ss_pred CCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCC
Q 006566 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (640)
Q Consensus 241 GSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn 285 (640)
. . +.-+..+++++.|-.++-+-+=..+
T Consensus 161 ~-----------~-------~~~~~~~l~~~~~~~~~g~~~D~~h 187 (290)
T 3tva_A 161 Q-----------E-------SADHLLEFIEDVNRPNLGINFDPAN 187 (290)
T ss_dssp S-----------S-------CHHHHHHHHHHHCCTTEEEEECHHH
T ss_pred C-----------C-------CHHHHHHHHHhcCCCCEEEEeccHH
Confidence 1 1 2345666777777677777664444
No 53
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=93.71 E-value=1.4 Score=43.42 Aligned_cols=157 Identities=10% Similarity=0.042 Sum_probs=95.9
Q ss_pred ceEEEeccCCC---CCCHHHHHHHHHHHHHcCCCEEEEecCCHHH--HHHHHHHHHHhhcCCCCcceee----ccCCC--
Q 006566 103 PIRVQTMTTND---TKDVAGTVEEVMRIADQGADLVRITVQGKRE--ADACFEIKNSLVQKNYNIPLVA----DIHFA-- 171 (640)
Q Consensus 103 PI~VQSMt~t~---T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~--A~~l~~I~~~L~~~g~~iPLVA----DIHF~-- 171 (640)
++.+++++-.+ ..+.+. +..+.++|++-|=+...+... .+.++++++.|.+.|..+...+ ++.|.
T Consensus 22 klg~~~~~~~~~~~~~~l~~----l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~~ 97 (309)
T 2hk0_A 22 KHGIYYSYWEHEWSAKFGPY----IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGPSKTKNLSSE 97 (309)
T ss_dssp EEEEEGGGGCSCTTSCSHHH----HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCCCSSSCSSCS
T ss_pred eeEEehhhcccccccccHHH----HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCCCCCCCCCCC
Confidence 45666665443 234443 666778899999888653211 1567778888888888766654 33342
Q ss_pred -HH----------HHH-HHhhh-cCceeeCC----CCCCchhhhccccccchH-HHHHHHhhhHhhHHHHHHHHHHcCCe
Q 006566 172 -PS----------VAL-RVAEC-FDKIRVNP----GNFADRRAQFEQLEYTDD-EYQKELQHIEEVFSPLVEKCKKYGRA 233 (640)
Q Consensus 172 -~~----------~Al-~Aa~~-v~KVRINP----GN~~d~~k~F~~~eYtde-eY~~Ele~I~~~f~~lV~~~Ke~g~a 233 (640)
+. -++ .|.+. +..|++.+ |.+.+ +. .+.+.++++.+.+.++.+.|+++|+.
T Consensus 98 d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~-----------~~~~~~~~~~~~~~~l~~l~~~a~~~gv~ 166 (309)
T 2hk0_A 98 DAAVRAAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYS-----------QPVDKAGDYARGVEGINGIADFANDLGIN 166 (309)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTT-----------SCCCHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccccccCC-----------CcCChHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 21 112 33334 77787654 33210 11 34556788899999999999999975
Q ss_pred EEEee-CCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChh
Q 006566 234 VRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPV 287 (640)
Q Consensus 234 IRIGv-NhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~ 287 (640)
|++ ||+... . .++.+.-+..+++++.|-.++-+-+=..+..
T Consensus 167 --l~lEn~~~~~----~-------~~~~~~~~~~~l~~~v~~~~vg~~~D~~H~~ 208 (309)
T 2hk0_A 167 --LCIEVLNRFE----N-------HVLNTAAEGVAFVKDVGKNNVKVMLDTFHMN 208 (309)
T ss_dssp --EEEECCCTTT----C-------SSCCSHHHHHHHHHHHTCTTEEEEEEHHHHH
T ss_pred --EEEeeccccc----c-------cccCCHHHHHHHHHHcCCCCeEEEEehhhHh
Confidence 466 565321 0 1223345667788888888888887665543
No 54
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=93.71 E-value=1.4 Score=44.31 Aligned_cols=170 Identities=14% Similarity=0.073 Sum_probs=103.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCH--------HHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCc
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQGK--------READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDK 184 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~~--------~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~K 184 (640)
+.+++.-++=+.+|.++|.+.|=++.|.- .+.+.++.|+ +. -++|+.+=. -|.+-...|+++ ++.
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~----~~-~~~~v~~l~-~n~~~i~~a~~~G~~~ 95 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIR----RA-DGVRYSVLV-PNMKGYEAAAAAHADE 95 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSC----CC-SSSEEEEEC-SSHHHHHHHHHTTCSE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHH----hC-CCCEEEEEe-CCHHHHHHHHHCCCCE
Confidence 47888899999999999999999987422 2334444443 33 356776555 577778888888 999
Q ss_pred eeeC-CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEE--EeeCCCCCcHhHHHHhC-CChHHHHH
Q 006566 185 IRVN-PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR--IGTNHGSLSDRIMSYYG-DSPRGMVE 260 (640)
Q Consensus 185 VRIN-PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIR--IGvNhGSLs~ril~ryG-dtp~gMVe 260 (640)
|+|- +++=...++ ++..| .+..-+++.++|+.||++|..++ |+.-- +-++. + .+| +
T Consensus 96 V~i~~~~S~~h~~~---~~~~~-------~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~-~~e~~-----~~~~~----~ 155 (295)
T 1ydn_A 96 IAVFISASEGFSKA---NINCT-------IAESIERLSPVIGAAINDGLAIRGYVSCVV-ECPYD-----GPVTP----Q 155 (295)
T ss_dssp EEEEEESCHHHHHH---HTSSC-------HHHHHHHHHHHHHHHHHTTCEEEEEEECSS-EETTT-----EECCH----H
T ss_pred EEEEEecCHHHHHH---HcCCC-------HHHHHHHHHHHHHHHHHcCCeEEEEEEEEe-cCCcC-----CCCCH----H
Confidence 9973 232101010 01111 22233557788999999999999 55432 22221 1 234 5
Q ss_pred HHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCC-cceEEE
Q 006566 261 SAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWD-YPLHLG 312 (640)
Q Consensus 261 SAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~d-yPLHLG 312 (640)
.+.++++.+.+.|-+-+.| +.+.=..+=..++.+++.+.++ ++ .||++-
T Consensus 156 ~~~~~~~~~~~~G~d~i~l--~Dt~G~~~P~~~~~lv~~l~~~-~~~~~l~~H 205 (295)
T 1ydn_A 156 AVASVTEQLFSLGCHEVSL--GDTIGRGTPDTVAAMLDAVLAI-APAHSLAGH 205 (295)
T ss_dssp HHHHHHHHHHHHTCSEEEE--EETTSCCCHHHHHHHHHHHHTT-SCGGGEEEE
T ss_pred HHHHHHHHHHhcCCCEEEe--cCCCCCcCHHHHHHHHHHHHHh-CCCCeEEEE
Confidence 6778888888999885554 4443333344455555555433 44 666543
No 55
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=93.49 E-value=0.28 Score=46.15 Aligned_cols=93 Identities=17% Similarity=0.152 Sum_probs=71.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCC
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNF 192 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~ 192 (640)
..|.+...+.++.+.++|++++-++.......+.++.+|+.+ +-+.++-++..-++.-+..|.+. +|-| +.|+--
T Consensus 18 ~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~---~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~~~ 93 (205)
T 1wa3_A 18 ANSVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLK---EKGAIIGAGTVTSVEQCRKAVESGAEFI-VSPHLD 93 (205)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHH---HTTCEEEEESCCSHHHHHHHHHHTCSEE-ECSSCC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHC---CCCcEEEecccCCHHHHHHHHHcCCCEE-EcCCCC
Confidence 346788888899999999999999876655555688888753 12467778766689999999988 9999 998721
Q ss_pred CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 193 ~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.++++.|+++|+++=.|+
T Consensus 94 ----------------------------~~~~~~~~~~g~~vi~g~ 111 (205)
T 1wa3_A 94 ----------------------------EEISQFCKEKGVFYMPGV 111 (205)
T ss_dssp ----------------------------HHHHHHHHHHTCEEECEE
T ss_pred ----------------------------HHHHHHHHHcCCcEECCc
Confidence 247889999999985544
No 56
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=93.44 E-value=2 Score=44.61 Aligned_cols=173 Identities=12% Similarity=0.048 Sum_probs=105.6
Q ss_pred CCCHHHHHHHHH-HHHHcCCCEEEEecCC--HHHHHHHHHHHHHhhc--CCCCcceeeccCCCHHHHHHHhhh-cCceee
Q 006566 114 TKDVAGTVEEVM-RIADQGADLVRITVQG--KREADACFEIKNSLVQ--KNYNIPLVADIHFAPSVALRVAEC-FDKIRV 187 (640)
Q Consensus 114 T~Dv~atv~Qi~-rl~~aGceiVRvtvp~--~~~A~~l~~I~~~L~~--~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRI 187 (640)
+..++.-++=++ +|.++|.+.+=+..|. .++-+.++.|++.... .--++++.|...-.. -...|+++ ++.|||
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~-~i~~a~~~g~~~v~i 115 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK-TVDWIKDSGAKVLNL 115 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH-HHHHHHHHTCCEEEE
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh-hHHHHHHCCCCEEEE
Confidence 467888888899 9999999999998875 5777888888873100 011356777665433 56667777 898997
Q ss_pred C-CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhC-CChHHHHHHHHHH
Q 006566 188 N-PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESAFEF 265 (640)
Q Consensus 188 N-PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryG-dtp~gMVeSAle~ 265 (640)
- +-+=....++|. ...+..-+++.+.++.||++|..++++. ++ . ..-+ .+ .+-.++.
T Consensus 116 ~~~~s~~~~~~~~~----------~s~~e~l~~~~~~v~~ak~~G~~v~~~~-----~~-~-~~~~~~~----~~~~~~~ 174 (337)
T 3ble_A 116 LTKGSLHHLEKQLG----------KTPKEFFTDVSFVIEYAIKSGLKINVYL-----ED-W-SNGFRNS----PDYVKSL 174 (337)
T ss_dssp EEECSHHHHHHHTC----------CCHHHHHHHHHHHHHHHHHTTCEEEEEE-----ET-H-HHHHHHC----HHHHHHH
T ss_pred EEecCHHHHHHHhC----------CCHHHHHHHHHHHHHHHHHCCCEEEEEE-----EE-C-CCCCcCC----HHHHHHH
Confidence 2 111001111111 1123334567789999999999998764 32 0 0001 13 3556777
Q ss_pred HHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCC-CcceEE
Q 006566 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW-DYPLHL 311 (640)
Q Consensus 266 ~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~-dyPLHL 311 (640)
++.+++.|-+ .|+++-+.=..+=..++.+++.+.++ + +-||++
T Consensus 175 ~~~~~~~Ga~--~i~l~DT~G~~~P~~v~~lv~~l~~~-~p~~~i~~ 218 (337)
T 3ble_A 175 VEHLSKEHIE--RIFLPDTLGVLSPEETFQGVDSLIQK-YPDIHFEF 218 (337)
T ss_dssp HHHHHTSCCS--EEEEECTTCCCCHHHHHHHHHHHHHH-CTTSCEEE
T ss_pred HHHHHHcCCC--EEEEecCCCCcCHHHHHHHHHHHHHh-cCCCeEEE
Confidence 8888899976 57778765443444444444444332 3 456644
No 57
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=93.36 E-value=0.36 Score=50.28 Aligned_cols=109 Identities=14% Similarity=0.221 Sum_probs=84.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+| +-||+|= .| ..-|.+.+++-+++|.+.|.+++==-++ ..+.+.+++|++. +++|+++|=.+ ++.-+.
T Consensus 188 ~g-d~~l~vD--~n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~~~~~~~~l~~~-----~~iPI~~de~i~~~~~~~ 257 (384)
T 2pgw_A 188 IG-DARLRLD--AN-EGWSVHDAINMCRKLEKYDIEFIEQPTV-SWSIPAMAHVREK-----VGIPIVADQAAFTLYDVY 257 (384)
T ss_dssp ST-TCEEEEE--CT-TCCCHHHHHHHHHHHGGGCCSEEECCSC-TTCHHHHHHHHHH-----CSSCEEESTTCCSHHHHH
T ss_pred cC-CcEEEEe--cC-CCCCHHHHHHHHHHHHhcCCCEEeCCCC-hhhHHHHHHHHhh-----CCCCEEEeCCcCCHHHHH
Confidence 56 7888882 12 3357788888899999999998643232 3467788888885 68999999664 688888
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.+++. +|-|.|.|+.+|.-.. +..+.+.|+++|+++=+|.
T Consensus 258 ~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 258 EICRQRAADMICIGPREIGGIQP----------------------MMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp HHHHTTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHTTCCEEECC
T ss_pred HHHHcCCCCEEEEcchhhCCHHH----------------------HHHHHHHHHHCCCeEeecc
Confidence 88765 9999999999988543 7889999999999987663
No 58
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=93.36 E-value=1.2 Score=43.08 Aligned_cols=153 Identities=14% Similarity=0.102 Sum_probs=94.9
Q ss_pred EEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceee----cc-------CCCHH
Q 006566 105 RVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA----DI-------HFAPS 173 (640)
Q Consensus 105 ~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVA----DI-------HF~~~ 173 (640)
.++||+-.+ .+.+. .+..++++|.+-|=+..|...+ ++++++.|.+.|..+..+. |. +-+|.
T Consensus 14 ~~~~~~f~~-~~~~~---~l~~~~~~G~~~vEl~~~~~~~---~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~ 86 (269)
T 3ngf_A 14 ANLSTMFNE-VPFLE---RFRLAAEAGFGGVEFLFPYDFD---ADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISG 86 (269)
T ss_dssp EETTTSCTT-SCHHH---HHHHHHHTTCSEEECSCCTTSC---HHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTT
T ss_pred eechhhhcc-CCHHH---HHHHHHHcCCCEEEecCCccCC---HHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCcc
Confidence 345555543 56655 4556777899999998887554 5677777777888776543 21 11221
Q ss_pred ----------HHH-HHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee-CC
Q 006566 174 ----------VAL-RVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NH 240 (640)
Q Consensus 174 ----------~Al-~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv-Nh 240 (640)
-++ .|.+. +..|++.|| ... . ..+++.++++.+.+.++.+.|+++|+.+=|=. |+
T Consensus 87 ~r~~~~~~~~~~i~~A~~lGa~~v~~~~g-~~~-~----------~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n~ 154 (269)
T 3ngf_A 87 REQEFRDNVDIALHYALALDCRTLHAMSG-ITE-G----------LDRKACEETFIENFRYAADKLAPHGITVLVEPLNT 154 (269)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEECCBC-BCT-T----------SCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEccC-CCC-C----------CCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCCc
Confidence 122 33344 889999999 322 1 12456678889999999999999997653332 42
Q ss_pred CCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChh
Q 006566 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPV 287 (640)
Q Consensus 241 GSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~ 287 (640)
-. .|-.++.+.-+..+++++.|-.++-+-+=..+..
T Consensus 155 ~~-----------~~~~~~~~~~~~~~l~~~v~~~~vg~~~D~~h~~ 190 (269)
T 3ngf_A 155 RN-----------MPGYFIVHQLEAVGLVKRVNRPNVAVQLDLYHAQ 190 (269)
T ss_dssp TT-----------STTBSCCCHHHHHHHHHHHCCTTEEEEEEHHHHH
T ss_pred cc-----------CccchhcCHHHHHHHHHHhCCCCCCeEEEhhhHH
Confidence 10 0001122334566788888888888887666543
No 59
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=93.29 E-value=2 Score=44.60 Aligned_cols=145 Identities=21% Similarity=0.222 Sum_probs=94.5
Q ss_pred eeEEEceeecCCCCc-eEEEeccCCCCCCHHHHHHHHHHHHHcC----CCEEEEe------------cCCHHHHHHHHHH
Q 006566 89 RTVMVGNVAIGSEHP-IRVQTMTTNDTKDVAGTVEEVMRIADQG----ADLVRIT------------VQGKREADACFEI 151 (640)
Q Consensus 89 r~V~VG~v~IGG~~P-I~VQSMt~t~T~Dv~atv~Qi~rl~~aG----ceiVRvt------------vp~~~~A~~l~~I 151 (640)
+.|.||++.+|+++| +.|==.+... |.+..++-.++|.++| ..+|+-. .+++.-.+.|+.+
T Consensus 27 ~~v~~~~i~~G~~~~l~vIaGPCsie--s~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L 104 (298)
T 3fs2_A 27 STVKVGNVTFSNSAPLALIAGPCQME--TRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVF 104 (298)
T ss_dssp SSEEETTEEECTTSCCEEEEECSBCC--CHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CCHHHHHHHH
T ss_pred ceEEECCEEECCCCceEEEEeCCcCC--CHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHH
Confidence 369999999999975 5665555544 6777777778887764 6656543 2232234555555
Q ss_pred HHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcC
Q 006566 152 KNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG 231 (640)
Q Consensus 152 ~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g 231 (640)
++-.+ ...+|++.++| ++.-+..+++.++-+-|--+|+-+ .++++.+-+.|
T Consensus 105 ~~~~~--e~GLpv~Tev~-D~~~v~~l~~~vd~lkIgA~~~~n--------------------------~~LLr~va~~g 155 (298)
T 3fs2_A 105 SDLKK--EYGFPVLTDIH-TEEQCAAVAPVVDVLQIPAFLCRQ--------------------------TDLLIAAARTG 155 (298)
T ss_dssp HHHHH--HHCCCEEEECC-SHHHHHHHTTTCSEEEECGGGTTC--------------------------HHHHHHHHHTT
T ss_pred HHHHH--hcCCeEEEEeC-CHHHHHHHHhhCCEEEECccccCC--------------------------HHHHHHHHccC
Confidence 55432 37799999995 666666667889999998888865 23666677889
Q ss_pred CeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEE
Q 006566 232 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF 279 (640)
Q Consensus 232 ~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~divi 279 (640)
.|| ++--|- .-|++.|. .| ++.+.+.|=++|++
T Consensus 156 kPV--ilK~Gm---------s~t~~ei~-~a---ve~i~~~Gn~~iiL 188 (298)
T 3fs2_A 156 RVV--NVKKGQ---------FLAPWDMK-NV---LAKITESGNPNVLA 188 (298)
T ss_dssp SEE--EEECCT---------TCCGGGHH-HH---HHHHHTTTCCCEEE
T ss_pred CcE--EEeCCC---------CCCHHHHH-HH---HHHHHHcCCCeEEE
Confidence 998 443331 02666663 33 34456777777766
No 60
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=93.21 E-value=2.8 Score=44.27 Aligned_cols=167 Identities=11% Similarity=0.093 Sum_probs=104.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceee-CC
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRV-NP 189 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRI-NP 189 (640)
...++.-++=+.+|.++|.+.+=+..| +..+++.++.|++. +.+.++.+=.=-+++-...|+++ ++-||| .+
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~----~~~~~v~~~~r~~~~di~~a~~~g~~~v~i~~~ 96 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLASL----GLKAKVVTHIQCRLDAAKVAVETGVQGIDLLFG 96 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTS----CCSSEEEEEEESCHHHHHHHHHTTCSEEEEEEC
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHHhc----CCCcEEEEEcccChhhHHHHHHcCCCEEEEEec
Confidence 466788888899999999999999887 45778888888763 55666665332234545677777 888886 33
Q ss_pred CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcC--CeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHH
Q 006566 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG--RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFAR 267 (640)
Q Consensus 190 GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g--~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~ 267 (640)
-|-...+ +|. ...+.+-+.+.+.|+.||++| ..+++..-.++ -.+| +-+++.++
T Consensus 97 ~s~~~~~-~~~----------~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~---------~~~~----~~~~~~~~ 152 (382)
T 2ztj_A 97 TSKYLRA-PHG----------RDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTF---------RSEE----QDLLAVYE 152 (382)
T ss_dssp C---------C----------CCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTT---------TSCH----HHHHHHHH
T ss_pred cCHHHHH-HhC----------CCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCC---------CCCH----HHHHHHHH
Confidence 3321111 111 112334456888999999999 88888764332 1234 34455555
Q ss_pred HHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHc-CCCcceEE
Q 006566 268 ICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVH-GWDYPLHL 311 (640)
Q Consensus 268 i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~-g~dyPLHL 311 (640)
.+.+. -+ .|+++-+.=..+=..+..+++.+.+. |.+-||++
T Consensus 153 ~~~~~-a~--~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~ 194 (382)
T 2ztj_A 153 AVAPY-VD--RVGLADTVGVATPRQVYALVREVRRVVGPRVDIEF 194 (382)
T ss_dssp HHGGG-CS--EEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred HHHHh-cC--EEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 56666 32 78899877555555666666666553 23455533
No 61
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=93.01 E-value=3.3 Score=40.06 Aligned_cols=156 Identities=14% Similarity=0.090 Sum_probs=88.7
Q ss_pred ceEEEeccCCCC--CCHHHHHHHHHHHHHcCCCEEEEecCCHH--HHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHH
Q 006566 103 PIRVQTMTTNDT--KDVAGTVEEVMRIADQGADLVRITVQGKR--EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRV 178 (640)
Q Consensus 103 PI~VQSMt~t~T--~Dv~atv~Qi~rl~~aGceiVRvtvp~~~--~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~A 178 (640)
.|-|+|++-.+. .|.+.+ +..+.++|++-|=+...... ..+.++++++.|.+.|..+.. +|--+.
T Consensus 3 kigi~~~~~~~~~~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~---~~~~~~----- 71 (294)
T 3vni_A 3 KHGIYYAYWEQEWEADYKYY---IEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV---GHGPSA----- 71 (294)
T ss_dssp CEEEEGGGGCSSSCCCHHHH---HHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE---EECCCG-----
T ss_pred eEEEehhhhcCCcCcCHHHH---HHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE---eecCCC-----
Confidence 356777766653 355554 45567789999999854322 245667777777777765544 231110
Q ss_pred hhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhC--CCh-
Q 006566 179 AECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG--DSP- 255 (640)
Q Consensus 179 a~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryG--dtp- 255 (640)
.+| +.+... +..++..+.++..++.|++.|...=+++-|+.... .|. .+.
T Consensus 72 -------~~~---l~~~d~-------------~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~----~~~~~~~~~ 124 (294)
T 3vni_A 72 -------EQN---LSSPDP-------------DIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPI----DYTKTIDKK 124 (294)
T ss_dssp -------GGC---TTCSCH-------------HHHHHHHHHHHHHHHHHHHHTCCEEEESTTSCSSC----CTTSCCCHH
T ss_pred -------CcC---CCCCCH-------------HHHHHHHHHHHHHHHHHHHhCCCeeeccccCCCCC----cCCCCCCHH
Confidence 123 333221 12334456688899999999987643344543321 011 122
Q ss_pred ---HHHHHHHHHHHHHHHHCCCCcEEEEEEeCC-----hhhHHHHHHHHHHH
Q 006566 256 ---RGMVESAFEFARICRKLDFHNFLFSMKASN-----PVVMVQAYRLLVAE 299 (640)
Q Consensus 256 ---~gMVeSAle~~~i~e~~~F~diviSmKsSn-----~~~mV~AyRlL~~~ 299 (640)
+.++++--+.++++++.|. .|.+-.-+ ...+.+....|++.
T Consensus 125 ~~~~~~~~~l~~l~~~a~~~Gv---~l~lEn~~~~~~~~~~~~~~~~~l~~~ 173 (294)
T 3vni_A 125 GDWERSVESVREVAKVAEACGV---DFCLEVLNRFENYLINTAQEGVDFVKQ 173 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC---EEEEECCCTTTCSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCC---EEEEEecCcccCcccCCHHHHHHHHHH
Confidence 4466666677778888774 56666543 22345555566666
No 62
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=92.87 E-value=0.41 Score=45.73 Aligned_cols=148 Identities=9% Similarity=0.005 Sum_probs=93.8
Q ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH----HHHHHHHHHHHHhhcCCCCcceee-ccCCC---H--
Q 006566 103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK----READACFEIKNSLVQKNYNIPLVA-DIHFA---P-- 172 (640)
Q Consensus 103 PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~----~~A~~l~~I~~~L~~~g~~iPLVA-DIHF~---~-- 172 (640)
++.+++.+ ....+.+.. +..++++|++-|=+..... .+.+.+.++++.|.+.|..+.-+. ...|+ +
T Consensus 8 ~lg~~~~~-~~~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~ 83 (272)
T 2q02_A 8 RFCINRKI-APGLSIEAF---FRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEV 83 (272)
T ss_dssp GEEEEGGG-CTTSCHHHH---HHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHH
T ss_pred hhhhcccc-cCCCCHHHH---HHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHH
Confidence 56777777 344566554 4556678999998874221 123456777788888888765442 22232 2
Q ss_pred -----HHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhh-HhhHHHHHHHHHHcCCeEEEee-CCCCCc
Q 006566 173 -----SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHI-EEVFSPLVEKCKKYGRAVRIGT-NHGSLS 244 (640)
Q Consensus 173 -----~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I-~~~f~~lV~~~Ke~g~aIRIGv-NhGSLs 244 (640)
+....|.+. ++.|++.||+.+. +..+++ .+.+.++.+.|+++|+ +|++ ||+ -+
T Consensus 84 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~----------------~~~~~~~~~~l~~l~~~a~~~gv--~l~~E~~~-~~ 144 (272)
T 2q02_A 84 VKKTEGLLRDAQGVGARALVLCPLNDGT----------------IVPPEVTVEAIKRLSDLFARYDI--QGLVEPLG-FR 144 (272)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSB----------------CCCHHHHHHHHHHHHHHHHTTTC--EEEECCCC-ST
T ss_pred HHHHHHHHHHHHHhCCCEEEEccCCCch----------------hHHHHHHHHHHHHHHHHHHHcCC--EEEEEecC-CC
Confidence 122234444 8899999997642 234567 7889999999999996 5577 664 11
Q ss_pred HhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCC
Q 006566 245 DRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (640)
Q Consensus 245 ~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn 285 (640)
. .+..|+ -+.++++++.| .++-+-+=..+
T Consensus 145 ~----~~~~~~-------~~~~~l~~~v~-~~~g~~~D~~h 173 (272)
T 2q02_A 145 V----SSLRSA-------VWAQQLIREAG-SPFKVLLDTFH 173 (272)
T ss_dssp T----CSCCCH-------HHHHHHHHHHT-CCCEEEEEHHH
T ss_pred c----ccccCH-------HHHHHHHHHhC-cCeEEEEEchH
Confidence 0 122343 45567788888 88888876555
No 63
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=92.84 E-value=0.46 Score=47.51 Aligned_cols=121 Identities=21% Similarity=0.213 Sum_probs=76.7
Q ss_pred CCCCceEEEeccCCCC--CCHHHHHHHHHHHHHcCCCEEEEecC--------CH--H--HHHHHHHHHHHhhcCCCCcce
Q 006566 99 GSEHPIRVQTMTTNDT--KDVAGTVEEVMRIADQGADLVRITVQ--------GK--R--EADACFEIKNSLVQKNYNIPL 164 (640)
Q Consensus 99 GG~~PI~VQSMt~t~T--~Dv~atv~Qi~rl~~aGceiVRvtvp--------~~--~--~A~~l~~I~~~L~~~g~~iPL 164 (640)
+...||-||+.|-.+. .|.+ +.+.+++++|++-|=+... +. + ..+.++++++.|.+.|..+..
T Consensus 18 ~~~~~~g~~~~s~~~~~~~~l~---~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~ 94 (305)
T 3obe_A 18 TAGKKMGLQTYSLGQELLQDMP---NGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISS 94 (305)
T ss_dssp CCCCCCEEEGGGGTHHHHTTHH---HHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEE
T ss_pred ccCCceEEEEEEchhhhhcCHH---HHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEE
Confidence 3456888998877653 3444 4556678889999988864 11 1 011456777777788887654
Q ss_pred eeccCCCH-----------------HHHH-HHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHH
Q 006566 165 VADIHFAP-----------------SVAL-RVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVE 225 (640)
Q Consensus 165 VADIHF~~-----------------~~Al-~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~ 225 (640)
+ |+.+ +-++ .|.+. +..|++ ||.- . ..+ .++++++.+.+.++.+
T Consensus 95 ~---~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~-~~~~---~------~~~----~~~~~~~~~~l~~l~~ 157 (305)
T 3obe_A 95 S---HLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQ-PSLP---R------IEN----EDDAKVVSEIFNRAGE 157 (305)
T ss_dssp E---BCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEE-CCCC---C------CSS----HHHHHHHHHHHHHHHH
T ss_pred e---eccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEe-CCCC---C------CCC----HHHHHHHHHHHHHHHH
Confidence 3 4432 1122 23344 889998 6531 1 012 2456788899999999
Q ss_pred HHHHcCCeEEEee-CCC
Q 006566 226 KCKKYGRAVRIGT-NHG 241 (640)
Q Consensus 226 ~~Ke~g~aIRIGv-NhG 241 (640)
.|+++|+. |++ ||.
T Consensus 158 ~a~~~Gv~--l~lEn~~ 172 (305)
T 3obe_A 158 ITKKAGIL--WGYHNHS 172 (305)
T ss_dssp HHHTTTCE--EEEECCS
T ss_pred HHHHcCCE--EEEecCc
Confidence 99999974 566 554
No 64
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=92.82 E-value=0.62 Score=47.28 Aligned_cols=95 Identities=17% Similarity=0.249 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---------HHHHH-----------HHHHHHHHhhcCCCCcceeeccCCCH--
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG---------KREAD-----------ACFEIKNSLVQKNYNIPLVADIHFAP-- 172 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~---------~~~A~-----------~l~~I~~~L~~~g~~iPLVADIHF~~-- 172 (640)
-|.+.+++.++.|.++|||+|=+-+|= ++.|. .+-++.+++|+.+.++|+|-=..+||
T Consensus 29 P~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~ 108 (267)
T 3vnd_A 29 PSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVF 108 (267)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHH
Confidence 467999999999999999999999775 44433 33455556777678999999888886
Q ss_pred -----HHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 173 -----SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 173 -----~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
+.+..|+++ ++.|=|. |-. + |...++++.|+++|+..
T Consensus 109 ~~g~e~f~~~~~~aGvdgvii~-----Dlp--~------------------ee~~~~~~~~~~~gl~~ 151 (267)
T 3vnd_A 109 ANGIDEFYTKAQAAGVDSVLIA-----DVP--V------------------EESAPFSKAAKAHGIAP 151 (267)
T ss_dssp HHCHHHHHHHHHHHTCCEEEET-----TSC--G------------------GGCHHHHHHHHHTTCEE
T ss_pred HhhHHHHHHHHHHcCCCEEEeC-----CCC--H------------------hhHHHHHHHHHHcCCeE
Confidence 346677788 8887774 211 1 12567899999999875
No 65
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=92.56 E-value=0.4 Score=50.48 Aligned_cols=113 Identities=10% Similarity=0.036 Sum_probs=86.5
Q ss_pred ecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHH
Q 006566 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175 (640)
Q Consensus 97 ~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~A 175 (640)
.+|.+.||+|= .|..-.|.+.+++-+++|.+.|.+++==-+| ..+.+.+++|+++ +++|+++|=.+ ++.-+
T Consensus 196 a~G~d~~l~vD--an~~~~~~~~A~~~~~~L~~~~i~~iEeP~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 267 (394)
T 3mqt_A 196 VIGWDMDMMVD--CLYRWTDWQKARWTFRQLEDIDLYFIEACLQ-HDDLIGHQKLAAA-----INTRLCGAEMSTTRFEA 267 (394)
T ss_dssp HHCSSSEEEEE--CTTCCSCHHHHHHHHHHTGGGCCSEEESCSC-TTCHHHHHHHHHH-----SSSEEEECTTCCHHHHH
T ss_pred HhCCCCeEEEE--CCCCCCCHHHHHHHHHHHhhcCCeEEECCCC-cccHHHHHHHHhh-----CCCCEEeCCCcCCHHHH
Confidence 35778888883 2333338899999999999999998864444 2356778888885 78999999765 47777
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
..+++. +|-|.|.|+..|.-.. ...+...|+++|+++=+|..
T Consensus 268 ~~~l~~~~~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~~~h~~ 311 (394)
T 3mqt_A 268 QEWLEKTGISVVQSDYNRCGGVTE----------------------LLRIMDICEHHNAQLMPHNW 311 (394)
T ss_dssp HHHHHHHCCSEECCCTTTSSCHHH----------------------HHHHHHHHHHHTCEECCCCC
T ss_pred HHHHHcCCCCeEecCccccCCHHH----------------------HHHHHHHHHHcCCEEeccCC
Confidence 777754 9999999999998443 67899999999999865543
No 66
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=92.29 E-value=0.96 Score=46.84 Aligned_cols=109 Identities=8% Similarity=0.063 Sum_probs=84.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-||+|=- | ..-|.+.+++-+++|.+.|.+.+==-++ ..+.+.++++++. +++|+++|=.+ ++.-+.
T Consensus 188 ~G~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPI~~dE~~~~~~~~~ 258 (371)
T 2ovl_A 188 LGDSFPLMVDA--N-MKWTVDGAIRAARALAPFDLHWIEEPTI-PDDLVGNARIVRE-----SGHTIAGGENLHTLYDFH 258 (371)
T ss_dssp HCTTSCEEEEC--T-TCSCHHHHHHHHHHHGGGCCSEEECCSC-TTCHHHHHHHHHH-----HCSCEEECTTCCSHHHHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHHhcCCCEEECCCC-cccHHHHHHHHhh-----CCCCEEeCCCCCCHHHHH
Confidence 57788887732 2 2347788899999999999998753333 3467788888885 67999999665 678777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.+++. ++-|.|.|+..|.-.. +..+++.|+++|+++=+|
T Consensus 259 ~~i~~~~~d~v~ik~~~~GGi~~----------------------~~~i~~~A~~~gi~~~~h 299 (371)
T 2ovl_A 259 NAVRAGSLTLPEPDVSNIGGYTT----------------------FRKVAALAEANNMLLTSH 299 (371)
T ss_dssp HHHHHTCCSEECCCTTTTTSHHH----------------------HHHHHHHHHHTTCCEEEC
T ss_pred HHHHcCCCCEEeeCccccCCHHH----------------------HHHHHHHHHHcCCeEccc
Confidence 77665 9999999999988543 788999999999998664
No 67
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=92.08 E-value=2.4 Score=41.29 Aligned_cols=164 Identities=14% Similarity=0.076 Sum_probs=89.6
Q ss_pred ceeecCCCCceEEEe----ccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCccee-e--
Q 006566 94 GNVAIGSEHPIRVQT----MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLV-A-- 166 (640)
Q Consensus 94 G~v~IGG~~PI~VQS----Mt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLV-A-- 166 (640)
|-|+....-++.+++ ++-....--..-.+.+..+.++|.+-|=+..++..+ ..++++++.|.+.|..+.-+ +
T Consensus 13 ~~~~~~~~mklg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~-~~~~~~~~~l~~~gl~~~~~~~~~ 91 (290)
T 2zvr_A 13 GLVPRGSHMKLSLVISTSDAAFDALAFKGDLRKGMELAKRVGYQAVEIAVRDPSI-VDWNEVKILSEELNLPICAIGTGQ 91 (290)
T ss_dssp --------CEEEEEECCCC-------CHHHHHHHHHHHHHHTCSEEEEECSCGGG-SCHHHHHHHHHHHTCCEEEEECTH
T ss_pred CcCcCCCCceeEEecccchhhccccccccCHHHHHHHHHHhCCCEEEEcCCCcch-hhHHHHHHHHHHcCCeEEEEeccC
Confidence 334444445677777 322111111222344566778899999998876532 44677788888888887443 3
Q ss_pred -----ccCC---CHH----------HHH-HHhhh-cCceeeCC--CCCCchhhhccccccchHHHHHHHhhhHhhHHHHH
Q 006566 167 -----DIHF---APS----------VAL-RVAEC-FDKIRVNP--GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLV 224 (640)
Q Consensus 167 -----DIHF---~~~----------~Al-~Aa~~-v~KVRINP--GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV 224 (640)
++.| ++. -++ .|.+. +..|+ -| |... +..+++.++++.+.+.++.
T Consensus 92 p~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~-~~~~g~~~------------~~~~~~~~~~~~~~l~~l~ 158 (290)
T 2zvr_A 92 AYLADGLSLTHPNDEIRKKAIERVVKHTEVAGMFGALVII-GLVRGRRE------------GRSYEETEELFIESMKRLL 158 (290)
T ss_dssp HHHTTCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEE-SGGGCCCT------------TSCHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEE-ecCCCCCC------------CcCHHHHHHHHHHHHHHHH
Confidence 4444 221 111 23333 56666 34 3311 1124456678888888899
Q ss_pred HHHHHcCCeEEEee-CCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCCh
Q 006566 225 EKCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286 (640)
Q Consensus 225 ~~~Ke~g~aIRIGv-NhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~ 286 (640)
+.|++ |+|++ |+.. |. -.++.+.-+..+++++.|-.++-+-+=..+.
T Consensus 159 ~~a~~----v~l~lEn~~~--------~~---~~~~~~~~~~~~l~~~~~~~~vgl~~D~~h~ 206 (290)
T 2zvr_A 159 ELTEH----AKFVIEPLNR--------YE---TDFINTIDDALRILRKINSNRVGILADTFHM 206 (290)
T ss_dssp HHCSS----CCEEECCCCT--------TT---CSSCCSHHHHHHHHHHHCCTTEEEEEEHHHH
T ss_pred HHhcc----CEEEEEeCCC--------cC---ccccCCHHHHHHHHHHcCCCCEEEEEehhHh
Confidence 98887 77888 5431 11 1122344567788888888888888766553
No 68
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=92.08 E-value=0.5 Score=49.80 Aligned_cols=112 Identities=9% Similarity=0.001 Sum_probs=86.0
Q ss_pred ecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHH
Q 006566 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175 (640)
Q Consensus 97 ~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~A 175 (640)
.+|.+.||+|= .|..-.|.+.+++-+++|.+.|.+++==-++ ..+.+.++.|+++ +++|+++|=.+ ++.-+
T Consensus 201 a~G~d~~l~vD--aN~~~~~~~~A~~~~~~L~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 272 (394)
T 3mkc_A 201 ILGHDTDMMVD--YLYRFTDWYEVARLLNSIEDLELYFAEATLQ-HDDLSGHAKLVEN-----TRSRICGAEMSTTRFEA 272 (394)
T ss_dssp HHCSSSEEEEE--CTTCCCCHHHHHHHHHHTGGGCCSEEESCSC-TTCHHHHHHHHHH-----CSSCBEECTTCCHHHHH
T ss_pred HhCCCCeEEEe--CCCCCCCHHHHHHHHHHhhhcCCeEEECCCC-chhHHHHHHHHhh-----CCCCEEeCCCCCCHHHH
Confidence 35778888873 2333338899999999999999998864444 2356778888885 78999999664 47777
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
..+++. +|-|.|.|+..|.-.. ...+...|+++|+++=+|.
T Consensus 273 ~~~l~~~~~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~~~h~ 315 (394)
T 3mkc_A 273 EEWITKGKVHLLQSDYNRCGGLTE----------------------LRRITEMATANNVQVMPHN 315 (394)
T ss_dssp HHHHHTTCCSEECCCTTTTTHHHH----------------------HHHHHHHHHHTTCEECCCC
T ss_pred HHHHHcCCCCeEecCccccCCHHH----------------------HHHHHHHHHHcCCEEeecC
Confidence 777754 9999999999987442 6789999999999985554
No 69
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=92.08 E-value=1.9 Score=42.52 Aligned_cols=121 Identities=13% Similarity=0.116 Sum_probs=87.5
Q ss_pred eEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeec---------cCCCHH-
Q 006566 104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVAD---------IHFAPS- 173 (640)
Q Consensus 104 I~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVAD---------IHF~~~- 173 (640)
++.|.--..+-++.+--++..+...++|+.-+|+. .-+.+++||+. +++|+++. +.-+|.
T Consensus 22 vscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~-----~~~~i~~ir~~-----v~~Pvig~~k~d~~~~~~~I~~~~ 91 (232)
T 3igs_A 22 VSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIE-----GIDNLRMTRSL-----VSVPIIGIIKRDLDESPVRITPFL 91 (232)
T ss_dssp EECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEE-----SHHHHHHHHTT-----CCSCEEEECBCCCSSCCCCBSCSH
T ss_pred EEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEEC-----CHHHHHHHHHh-----cCCCEEEEEeecCCCcceEeCccH
Confidence 45688888888999999999999999999999985 24678888874 88999862 344443
Q ss_pred -HHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHh
Q 006566 174 -VALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY 251 (640)
Q Consensus 174 -~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ry 251 (640)
-+.++.+. +|.|=++=....++. .+.++++.||++|..+ +++..
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~p~----------------------~l~~~i~~~~~~g~~v--~~~v~---------- 137 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGTARQRPV----------------------AVEALLARIHHHHLLT--MADCS---------- 137 (232)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSS----------------------CHHHHHHHHHHTTCEE--EEECC----------
T ss_pred HHHHHHHHcCCCEEEECccccCCHH----------------------HHHHHHHHHHHCCCEE--EEeCC----------
Confidence 46677777 898866544433322 2778999999998877 44221
Q ss_pred CCChHHHHHHHHHHHHHHHHCCCCcEE
Q 006566 252 GDSPRGMVESAFEFARICRKLDFHNFL 278 (640)
Q Consensus 252 Gdtp~gMVeSAle~~~i~e~~~F~div 278 (640)
| .|+++.+++.|++-|.
T Consensus 138 --t--------~eea~~a~~~Gad~Ig 154 (232)
T 3igs_A 138 --S--------VDDGLACQRLGADIIG 154 (232)
T ss_dssp --S--------HHHHHHHHHTTCSEEE
T ss_pred --C--------HHHHHHHHhCCCCEEE
Confidence 1 3566778888987664
No 70
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=92.06 E-value=5.2 Score=44.42 Aligned_cols=239 Identities=15% Similarity=0.219 Sum_probs=147.6
Q ss_pred eEEEceeecCCCCceEEEeccCCCCCC---HHHHHHHHHHHHHcCCCEEEEe---c-------C------CHHHHHHHHH
Q 006566 90 TVMVGNVAIGSEHPIRVQTMTTNDTKD---VAGTVEEVMRIADQGADLVRIT---V-------Q------GKREADACFE 150 (640)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T~D---v~atv~Qi~rl~~aGceiVRvt---v-------p------~~~~A~~l~~ 150 (640)
.++||++.+ .|+|..-.|+...+.+ ++..++--.+.++-|+-+|=.- + | +.+..+.+++
T Consensus 8 p~~ig~~~l--~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 85 (671)
T 1ps9_A 8 PLDLGFTTL--KNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRT 85 (671)
T ss_dssp CEECSSCEE--SSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHH
T ss_pred CeeECCEEE--cCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHH
Confidence 477888887 7999999999743321 4566777777888788776221 1 1 3466788999
Q ss_pred HHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHc
Q 006566 151 IKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY 230 (640)
Q Consensus 151 I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~ 230 (640)
+.+..++.|. |+++=|+-.-+.+.. .--+-|-.+......+...++|.+ |++.+.+.|..-.+.|++.
T Consensus 86 ~~~~vh~~g~--~i~~Ql~h~Gr~~~~------~~~~~ps~~~~~~~~~~p~~~t~~----ei~~~i~~~~~aA~~a~~a 153 (671)
T 1ps9_A 86 ITEAVHQEGG--KIALQILHTGRYSYQ------PHLVAPSALQAPINRFVPHELSHE----EILQLIDNFARCAQLAREA 153 (671)
T ss_dssp HHHHHHHTTC--CEEEEECCCGGGSBS------TTCEESSSCCCTTCSSCCEECCHH----HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCC--EEEEEeccCCcccCC------CCCcCCCCcccccCCCCCccCCHH----HHHHHHHHHHHHHHHHHHc
Confidence 8888887775 666666543222210 001223333221112334456655 5777778888888888988
Q ss_pred C-CeEEEeeCCCCCcHhHHH--------HhCCChHHHHHHHHHHHHHHHH-CCCCcEEEEEEeC--Ch---hhHHHHHHH
Q 006566 231 G-RAVRIGTNHGSLSDRIMS--------YYGDSPRGMVESAFEFARICRK-LDFHNFLFSMKAS--NP---VVMVQAYRL 295 (640)
Q Consensus 231 g-~aIRIGvNhGSLs~ril~--------ryGdtp~gMVeSAle~~~i~e~-~~F~diviSmKsS--n~---~~mV~AyRl 295 (640)
| -.|.|=.-||-|=+.+++ .||.+.+.=..-++|-++-.++ .| .|+.+++|=| +. -...+.+..
T Consensus 154 Gfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG-~~~~v~vrls~~~~~~~g~~~~~~~~ 232 (671)
T 1ps9_A 154 GYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVG-NDFIIIYRLSMLDLVEDGGTFAETVE 232 (671)
T ss_dssp TCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC-SSSEEEEEEEEECCSTTCCCHHHHHH
T ss_pred CCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcC-CCceEEEEECccccCCCCCCHHHHHH
Confidence 8 467776668877555553 4776666556666676665544 33 3456766665 21 123556777
Q ss_pred HHHHHHHcCCCcceEEEe--ecCC---------CCC------------------cceeehHHHHHHHhhhcCCcEEEe
Q 006566 296 LVAEMYVHGWDYPLHLGV--TEAG---------EGE------------------DGRMKSAIGIGTLLQDGLGDTIRV 344 (640)
Q Consensus 296 L~~~m~~~g~dyPLHLGV--TEAG---------~ge------------------dGrIKSAiGIG~LL~DGIGDTIRV 344 (640)
+++.+++.|.+| ||++. .|.. .+. .|.|.+.-..-.+|.+|--|.|-+
T Consensus 233 ~a~~l~~~g~d~-i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~ 309 (671)
T 1ps9_A 233 LAQAIEAAGATI-INTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSM 309 (671)
T ss_dssp HHHHHHHHTCSE-EEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHhcCCCE-EEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEEEe
Confidence 889999999998 77653 2321 111 155666666666777777777655
No 71
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=92.04 E-value=0.61 Score=48.34 Aligned_cols=109 Identities=8% Similarity=0.112 Sum_probs=83.2
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-C-HHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-A-PSVA 175 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~-~~~A 175 (640)
+|.+-||+|=- | ..-+.+.+++-+++|.+.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+ + +.-+
T Consensus 197 ~g~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 267 (382)
T 1rvk_A 197 VGPDIRLMIDA--F-HWYSRTDALALGRGLEKLGFDWIEEPMD-EQSLSSYKWLSDN-----LDIPVVGPESAAGKHWHR 267 (382)
T ss_dssp HCTTSEEEEEC--C-TTCCHHHHHHHHHHHHTTTCSEEECCSC-TTCHHHHHHHHHH-----CSSCEEECSSCSSHHHHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHHhcCCCEEeCCCC-hhhHHHHHHHHhh-----CCCCEEEeCCccCcHHHH
Confidence 56677777621 2 2346788888889999999988643333 3467778888885 68999999765 4 6777
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
..+++. ++-|.|.|+..|.-.. ...++..|+++|+++=+|
T Consensus 268 ~~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 268 AEWIKAGACDILRTGVNDVGGITP----------------------ALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp HHHHHTTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHTTCCEEEC
T ss_pred HHHHHcCCCCEEeeCchhcCCHHH----------------------HHHHHHHHHHcCCeEeec
Confidence 777665 9999999999987443 778999999999999888
No 72
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=91.81 E-value=1.4 Score=43.56 Aligned_cols=165 Identities=8% Similarity=-0.010 Sum_probs=97.9
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH-------HHHHHHHHHHHhhcCCCCcceee----cc--
Q 006566 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR-------EADACFEIKNSLVQKNYNIPLVA----DI-- 168 (640)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~-------~A~~l~~I~~~L~~~g~~iPLVA----DI-- 168 (640)
..+.|++.+-++.... ..-..+..++++|++-|=+...... ..+.++++++.|.+.|..++.+. +.
T Consensus 20 ~~lgi~~~~~~~~~~~-~~~~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~~~~~~~~~ 98 (316)
T 3qxb_A 20 MKLGVNLCFAVKRWLE-PDRLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIESTFGGLASYTY 98 (316)
T ss_dssp CCEEEEGGGGTTTSCS-HHHHHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHTS
T ss_pred ccceecchHHHhccCC-HHHHHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEEeecccccccc
Confidence 4567777755543321 1112234557999999999875432 23467888888888888876542 21
Q ss_pred ----CCCHH----------HHH-HHhhh-cCceeeCCCCCCchhhhccccccch-HHHHHHHhhhHhhHHHHHHHHHHcC
Q 006566 169 ----HFAPS----------VAL-RVAEC-FDKIRVNPGNFADRRAQFEQLEYTD-DEYQKELQHIEEVFSPLVEKCKKYG 231 (640)
Q Consensus 169 ----HF~~~----------~Al-~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtd-eeY~~Ele~I~~~f~~lV~~~Ke~g 231 (640)
+-++. -++ .|.+. +..|.+.+|.+..+. |++ ...++.++++.+.+.++.+.|+++|
T Consensus 99 ~~l~~~d~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~-------~~~~~~~~~~~~~~~~~l~~l~~~a~~~G 171 (316)
T 3qxb_A 99 NHFLAPTLELQSLGYQHLKRAIDMTAAMEVPATGMPFGSYSAAD-------ALNPARREEIYAIARDMWIELAAYAKRQG 171 (316)
T ss_dssp CBTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHH-------HTCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCcCccc-------cCCcccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 22332 122 33334 777887777643211 222 2356778999999999999999999
Q ss_pred CeEEEeeC---CCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCCh
Q 006566 232 RAVRIGTN---HGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286 (640)
Q Consensus 232 ~aIRIGvN---hGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~ 286 (640)
+. .|++- ++. .++.|++ .+.++++.++..|=.++-+-+=..+.
T Consensus 172 v~-~l~lE~~~~~~-------~~~~t~~----~~~~l~~~v~~~~~~~vg~~lD~~H~ 217 (316)
T 3qxb_A 172 LS-MLYVEPVPLAT-------EFPSSAA----DAARLMADLDGRTEIPVRLLVDWGHA 217 (316)
T ss_dssp CC-EEEECCCSCTT-------BSSCSHH----HHHHHHHHHTTTSSSCEEEEEEHHHH
T ss_pred Ce-EEEEEecCCcc-------ccCCCHH----HHHHHHHHHhccCCCCEEEEEEccch
Confidence 76 14652 221 3455653 33344444433366677777665543
No 73
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=91.61 E-value=2.1 Score=44.28 Aligned_cols=159 Identities=9% Similarity=0.065 Sum_probs=96.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceeeccCCCH---HHHHHHhhh--cCceee
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHFAP---SVALRVAEC--FDKIRV 187 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~---~~Al~Aa~~--v~KVRI 187 (640)
..++.-++=+++|.++|.+.+=+..| +.++.+.++.|++.+ -++.+.|=.--+. +.|++|+.. ++.|+|
T Consensus 25 ~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~----~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i 100 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKAV----TRPTICALTRAKEADINIAGEALRFAKRSRIHT 100 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHC----CSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhC----CCCEEEEeecCCHHHHHHHHHhhcccCCCEEEE
Confidence 34566677788899999999999988 477888999998864 2344444333333 344444332 444554
Q ss_pred C-CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHH
Q 006566 188 N-PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFA 266 (640)
Q Consensus 188 N-PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~ 266 (640)
- |-+=....+ .+..-.+..-+.+.+.|+.||++|..+.+|.--++- .+| +-.++.+
T Consensus 101 ~~s~Sd~~~~~----------~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~---------~~~----~~~~~~~ 157 (325)
T 3eeg_A 101 GIGSSDIHIEH----------KLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGR---------ADQ----AFLARMV 157 (325)
T ss_dssp EEECSHHHHC--------------CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGG---------SCH----HHHHHHH
T ss_pred EecccHHHHHH----------HhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcccccc---------chH----HHHHHHH
Confidence 1 111100000 011223455677889999999999998876532211 244 4556667
Q ss_pred HHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHH
Q 006566 267 RICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302 (640)
Q Consensus 267 ~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~ 302 (640)
+.+.+.|-+ .|+++-+.=..+=..++.+++.+.+
T Consensus 158 ~~~~~~G~~--~i~l~DT~G~~~P~~v~~lv~~l~~ 191 (325)
T 3eeg_A 158 EAVIEAGAD--VVNIPDTTGYMLPWQYGERIKYLMD 191 (325)
T ss_dssp HHHHHHTCS--EEECCBSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCC--EEEecCccCCcCHHHHHHHHHHHHH
Confidence 777778876 5888887655444555555555543
No 74
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=91.52 E-value=0.59 Score=48.49 Aligned_cols=146 Identities=15% Similarity=0.134 Sum_probs=91.9
Q ss_pred HHHHHHHHHcCCCEEEEecCC-------HH-HHHHHHHHHHHhhcCCCCcceeecc----------CC---CHH------
Q 006566 121 VEEVMRIADQGADLVRITVQG-------KR-EADACFEIKNSLVQKNYNIPLVADI----------HF---APS------ 173 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~-------~~-~A~~l~~I~~~L~~~g~~iPLVADI----------HF---~~~------ 173 (640)
.+.+..++++|++-|=+...+ .. ..+.++++++.|.+.|..+..++=- .| ++.
T Consensus 36 ~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i 115 (386)
T 1muw_A 36 VETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPMATTNLFTHPVFKDGGFTANDRDVRRYAL 115 (386)
T ss_dssp HHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEEEecccccccccccCCCCCCCHHHHHHHH
Confidence 444566667799999888632 11 1467888999999999998877531 12 221
Q ss_pred -----HHHHHhhh-cCceeeCCCCCCchhhhccccccc-hHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee-CCCCCcH
Q 006566 174 -----VALRVAEC-FDKIRVNPGNFADRRAQFEQLEYT-DDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSD 245 (640)
Q Consensus 174 -----~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYt-deeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv-NhGSLs~ 245 (640)
....|.+. ++.|++.||..+. +|. +..+.+.++++.+.+.++.+.|+++|..|||++ ||..-+.
T Consensus 116 ~~~~~~i~~A~~LGa~~vvv~~g~~~~--------~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~~~e~~ 187 (386)
T 1muw_A 116 RKTIRNIDLAVELGAKTYVAWGGREGA--------ESGAAKDVRVALDRMKEAFDLLGEYVTSQGYDIRFAIEPKPNEPR 187 (386)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCTTCEE--------SSTTSCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSS
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCcc--------cccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeCCCCCc
Confidence 11123334 8889999986431 111 123667889999999999999999997778888 4532100
Q ss_pred hHHHHhCCChHHHHHHHHHHHHHHHHCCCCc-EEEEEEe
Q 006566 246 RIMSYYGDSPRGMVESAFEFARICRKLDFHN-FLFSMKA 283 (640)
Q Consensus 246 ril~ryGdtp~gMVeSAle~~~i~e~~~F~d-iviSmKs 283 (640)
. ..+..| .-+.++++++.|-.| +-+-+=.
T Consensus 188 ~--~~~~~t-------~~~~~~li~~v~~pn~vgl~lD~ 217 (386)
T 1muw_A 188 G--DILLPT-------VGHALAFIERLERPELYGVNPEV 217 (386)
T ss_dssp S--EESSCS-------HHHHHHHHTTSSSGGGEEECCBH
T ss_pred c--cccCCC-------HHHHHHHHHHhCCccceEEEeec
Confidence 0 012233 345566777777665 6665433
No 75
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=91.50 E-value=1.1 Score=46.80 Aligned_cols=112 Identities=18% Similarity=0.236 Sum_probs=83.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+-+++|=- | ..-+.+.+++-+++|.+.|.+.+==-++ ..+.+.+..++++ +++|+++|=. +++.-+.
T Consensus 191 ~g~~~~l~vDa--n-~~~~~~~A~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 261 (383)
T 3i4k_A 191 VGDRVSLRIDI--N-ARWDRRTALHYLPILAEAGVELFEQPTP-ADDLETLREITRR-----TNVSVMADESVWTPAEAL 261 (383)
T ss_dssp TTTTSEEEEEC--T-TCSCHHHHHHHHHHHHHTTCCEEESCSC-TTCHHHHHHHHHH-----HCCEEEESTTCSSHHHHH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhcCCCEEECCCC-hhhHHHHHHHHhh-----CCCCEEecCccCCHHHHH
Confidence 56677888742 2 2345778888889999999888753333 2356778888875 7899999965 4577777
Q ss_pred HHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCC
Q 006566 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (640)
Q Consensus 177 ~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNh 240 (640)
.+++ .++-|.|.|+..|.-.. ...+...|+++|+++=+|.+.
T Consensus 262 ~~i~~~~~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~~~~~~~ 305 (383)
T 3i4k_A 262 AVVKAQAADVIALKTTKHGGLLE----------------------SKKIAAIAEAGGLACHGATSL 305 (383)
T ss_dssp HHHHHTCCSEEEECTTTTTSHHH----------------------HHHHHHHHHHTTCEEEECCSC
T ss_pred HHHHcCCCCEEEEcccccCCHHH----------------------HHHHHHHHHHcCCeEEeCCCC
Confidence 7775 49999999999998443 778899999999998666543
No 76
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=91.26 E-value=0.75 Score=44.08 Aligned_cols=138 Identities=12% Similarity=0.046 Sum_probs=86.1
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC-------------HHHHHHHHHHHHHhhcCCCCcceeecc
Q 006566 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG-------------KREADACFEIKNSLVQKNYNIPLVADI 168 (640)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~-------------~~~A~~l~~I~~~L~~~g~~iPLVADI 168 (640)
-+|.+||++-.+. +.+. .+.+++++|++-|=+.... .-+.+.++++++.|.+.|..+..++=
T Consensus 10 mklg~~~~~~~~~-~~~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~- 84 (262)
T 3p6l_A 10 WRLGMQSYSFHLF-PLTE---ALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGV- 84 (262)
T ss_dssp EEEEEEGGGGTTS-CHHH---HHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEE-
T ss_pred cEEEEEecccCCC-CHHH---HHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEec-
Confidence 3578898887653 5554 4556678899999988632 12355678888888888988765531
Q ss_pred CCC-----HHHHH-HHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee-CC
Q 006566 169 HFA-----PSVAL-RVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NH 240 (640)
Q Consensus 169 HF~-----~~~Al-~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv-Nh 240 (640)
.++ .+-++ .|.+. +..|++.||. +.+..+.+.|+++|+.+ ++ ||
T Consensus 85 ~~~~~~~~~~~~i~~A~~lGa~~v~~~~~~--------------------------~~~~~l~~~a~~~gv~l--~~En~ 136 (262)
T 3p6l_A 85 YVAEKSSDWEKMFKFAKAMDLEFITCEPAL--------------------------SDWDLVEKLSKQYNIKI--SVHNH 136 (262)
T ss_dssp ECCSSTTHHHHHHHHHHHTTCSEEEECCCG--------------------------GGHHHHHHHHHHHTCEE--EEECC
T ss_pred cCCccHHHHHHHHHHHHHcCCCEEEecCCH--------------------------HHHHHHHHHHHHhCCEE--EEEeC
Confidence 111 22333 44444 8999999971 13577899999999755 54 34
Q ss_pred CCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCCh
Q 006566 241 GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286 (640)
Q Consensus 241 GSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~ 286 (640)
..- ....|| -+.+++++. +-.++-+-+=..+.
T Consensus 137 ~~~------~~~~~~-------~~~~~ll~~-~~~~~g~~~D~~h~ 168 (262)
T 3p6l_A 137 PQP------SDYWKP-------ENLLKAISG-RSQSLGSCSDVGHW 168 (262)
T ss_dssp SSS------SSSSSH-------HHHHHHHTT-SCTTEEEEEEHHHH
T ss_pred CCc------cccCCH-------HHHHHHHHh-CCCceEEEechHHH
Confidence 321 011244 244556654 66777777665553
No 77
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=91.18 E-value=0.15 Score=51.48 Aligned_cols=167 Identities=10% Similarity=0.043 Sum_probs=99.6
Q ss_pred EEEceeecCCCCceEEEeccCC---CCCCHHHHHHHHHHHHHc-CCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceee
Q 006566 91 VMVGNVAIGSEHPIRVQTMTTN---DTKDVAGTVEEVMRIADQ-GADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA 166 (640)
Q Consensus 91 V~VG~v~IGG~~PI~VQSMt~t---~T~Dv~atv~Qi~rl~~a-GceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVA 166 (640)
..+|...+|. ++.|+... +..|++.+ +.+++++ |.+-|=+..|... .+.++++++.|.+.|..+..+.
T Consensus 10 ~~~~~w~~~~----~~~~f~~~g~~~~~~~~e~---l~~aa~~~G~~~VEl~~~~~~-~~~~~~l~~~l~~~Gl~i~~~~ 81 (333)
T 3ktc_A 10 FGAGLWHFAN----YIDRYAVDGYGPALSTIDQ---INAAKEVGELSYVDLPYPFTP-GVTLSEVKDALKDAGLKAIGIT 81 (333)
T ss_dssp EEEEGGGGSC----CCCSSSTTCSSCCCCHHHH---HHHHHHHSSEEEEEEEESCST-TCCHHHHHHHHHHHTCEEEEEE
T ss_pred ceeeeeeeec----ccccccCCCCCCCCCHHHH---HHHHHHhCCCCEEEecCCCcc-hhHHHHHHHHHHHcCCeEEEEe
Confidence 4677777765 55665543 24566554 5556667 9888888877643 3456677777778888877554
Q ss_pred ccCC------------CHHH----------HH-HHhhh-cCceeeCCCCCCchhhhccccccc-hHHHHHHHhhhHhhHH
Q 006566 167 DIHF------------APSV----------AL-RVAEC-FDKIRVNPGNFADRRAQFEQLEYT-DDEYQKELQHIEEVFS 221 (640)
Q Consensus 167 DIHF------------~~~~----------Al-~Aa~~-v~KVRINPGN~~d~~k~F~~~eYt-deeY~~Ele~I~~~f~ 221 (640)
=-+| +|.. ++ .|.+. ++.|.+.||--+. .|. +..+.+.++++.+.+.
T Consensus 82 ~~~~~~~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~g~~g~--------~~~~~~~~~~~~~~~~~~l~ 153 (333)
T 3ktc_A 82 PEIYLQKWSRGAFTNPDPAARAAAFELMHESAGIVRELGANYVKVWPGQDGW--------DYPFQVSHKNLWKLAVDGMR 153 (333)
T ss_dssp ECTTSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEE--------SSTTSSCHHHHHHHHHHHHH
T ss_pred cCcCcccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCc--------CCCCcCCHHHHHHHHHHHHH
Confidence 3223 2211 22 23334 8889999983111 111 2336678889999999
Q ss_pred HHHHHHHHcCCeEEEee-CCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCCh
Q 006566 222 PLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286 (640)
Q Consensus 222 ~lV~~~Ke~g~aIRIGv-NhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~ 286 (640)
++.+.|++. -|.|.. |++.-. ..| +.+.-+.++++++.|-.++-+-+=..+.
T Consensus 154 ~l~~~a~~~--~i~lE~~p~~~~~----~~~-------~~~~~~~~~ll~~v~~~~vgl~lD~~H~ 206 (333)
T 3ktc_A 154 DLAGANPDV--KFAIEYKPREPRV----KMT-------WDSAARTLLGIEDIGLDNVGVLLDFGHA 206 (333)
T ss_dssp HHHHTCTTS--EEEEECCSCSSSS----EES-------SCSHHHHHHHHHHHTCTTEEEEEEHHHH
T ss_pred HHHHHhhcC--CEEEEEecCCCCc----ccc-------CCCHHHHHHHHHHcCCcceEEEEecCcH
Confidence 999999854 444452 111000 012 2333445667777787788887765553
No 78
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=91.11 E-value=0.82 Score=43.90 Aligned_cols=110 Identities=9% Similarity=0.038 Sum_probs=75.1
Q ss_pred CCCCceEEEeccCCCCCCHH--HHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceee-------ccC
Q 006566 99 GSEHPIRVQTMTTNDTKDVA--GTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA-------DIH 169 (640)
Q Consensus 99 GG~~PI~VQSMt~t~T~Dv~--atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVA-------DIH 169 (640)
-+.-++++|.-...+....+ ...+.+.++.++|+..+.+.. .+.++.|++. +++|++. |.|
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~~-----~~~i~~i~~~-----~~~p~i~~~~~~~~~~~ 84 (234)
T 1yxy_A 15 KGGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRANS-----VRDIKEIQAI-----TDLPIIGIIKKDYPPQE 84 (234)
T ss_dssp TTSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEES-----HHHHHHHHTT-----CCSCEEEECBCCCTTSC
T ss_pred hCCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecCC-----HHHHHHHHHh-----CCCCEEeeEcCCCCccc
Confidence 46678888888877777667 678888999999999999862 2557777764 6799863 677
Q ss_pred C----CHHHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHc--CCeEEEeeCC
Q 006566 170 F----APSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY--GRAVRIGTNH 240 (640)
Q Consensus 170 F----~~~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~--g~aIRIGvNh 240 (640)
+ ....+..+++. ++.|=+.-....+... +.+.++++.+|+. +.. |+++.
T Consensus 85 ~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~~--------------------~~~~~~i~~i~~~~~~~~--v~~~~ 140 (234)
T 1yxy_A 85 PFITATMTEVDQLAALNIAVIAMDCTKRDRHDG--------------------LDIASFIRQVKEKYPNQL--LMADI 140 (234)
T ss_dssp CCBSCSHHHHHHHHTTTCSEEEEECCSSCCTTC--------------------CCHHHHHHHHHHHCTTCE--EEEEC
T ss_pred cccCChHHHHHHHHHcCCCEEEEcccccCCCCC--------------------ccHHHHHHHHHHhCCCCe--EEEeC
Confidence 7 23567777777 8877554433221100 0256788888887 555 46543
No 79
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=91.08 E-value=1.2 Score=42.77 Aligned_cols=159 Identities=13% Similarity=0.061 Sum_probs=95.3
Q ss_pred ceEEEeccCCC--CCCHHHHHHHHHHHHHcCCCEEEEecCCHHH--HHHHHHHHHHhhcCCCCcceee----ccCCC---
Q 006566 103 PIRVQTMTTND--TKDVAGTVEEVMRIADQGADLVRITVQGKRE--ADACFEIKNSLVQKNYNIPLVA----DIHFA--- 171 (640)
Q Consensus 103 PI~VQSMt~t~--T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~--A~~l~~I~~~L~~~g~~iPLVA----DIHF~--- 171 (640)
.|.+|+.+-.+ +.|.+..+ ..+.++|.+-|=+...+... ...++++++.|.+.|..+..++ ++.|.
T Consensus 3 kig~~~~~~~~~~~~~~~~~l---~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d 79 (290)
T 2qul_A 3 KVGMFYTYWSTEWMVDFPATA---KRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPD 79 (290)
T ss_dssp CEEEETTSSCSSSCCCHHHHH---HHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSC
T ss_pred ceeEEeeeecCcccccHHHHH---HHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCC
Confidence 46677766544 25665554 45567899999998876533 1567788888888888877664 34342
Q ss_pred HH----------HHH-HHhhh-cCceeeCC----CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEE
Q 006566 172 PS----------VAL-RVAEC-FDKIRVNP----GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (640)
Q Consensus 172 ~~----------~Al-~Aa~~-v~KVRINP----GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIR 235 (640)
+. -++ .|.+. +..|++.+ |. + .|. .+....+.++++.+.+.++.+.|+++|+.
T Consensus 80 ~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~--~---~~~----~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-- 148 (290)
T 2qul_A 80 KSVRDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQ--S---PPL----DMKDKRPYVDRAIESVRRVIKVAEDYGII-- 148 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSC--C---CCT----TCCCCHHHHHHHHHHHHTTHHHHHHHTCE--
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccCCc--c---cCC----CcccHHHHHHHHHHHHHHHHHHHHHcCCE--
Confidence 21 111 23333 66777522 22 0 010 01112345678888899999999999974
Q ss_pred Eee-CCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCCh
Q 006566 236 IGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286 (640)
Q Consensus 236 IGv-NhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~ 286 (640)
|++ ||+..+. .+..|+ -+..+++++.|-.++-+-+=..+.
T Consensus 149 l~lEn~~~~~~----~~~~~~-------~~~~~l~~~~~~~~~g~~~D~~h~ 189 (290)
T 2qul_A 149 YALEVVNRFEQ----WLCNDA-------KEAIAFADAVDSPACKVQLDTFHM 189 (290)
T ss_dssp EEEECCCTTTC----SSCCSH-------HHHHHHHHHHCCTTEEEEEEHHHH
T ss_pred EEEEeCccccc----cccCCH-------HHHHHHHHHcCCCCEEEEEEchhh
Confidence 566 5553210 112333 455677788887788887755543
No 80
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=91.05 E-value=0.6 Score=49.00 Aligned_cols=110 Identities=9% Similarity=0.104 Sum_probs=81.5
Q ss_pred cCCCCceEEEeccCCCCC--CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHH
Q 006566 98 IGSEHPIRVQTMTTNDTK--DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSV 174 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~--Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~ 174 (640)
+|.+-||+|= .| ..- |.+.+++-+++|.+.|.+.+==-++ ..+.+.++++++. .+++|+++|=.+ ++.-
T Consensus 190 ~G~d~~l~vD--an-~~~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~----~~~iPI~~dE~~~~~~~ 261 (401)
T 2hzg_A 190 LGPDGDLMVD--VG-QIFGEDVEAAAARLPTLDAAGVLWLEEPFD-AGALAAHAALAGR----GARVRIAGGEAAHNFHM 261 (401)
T ss_dssp HCSSSEEEEE--CT-TTTTTCHHHHHTTHHHHHHTTCSEEECCSC-TTCHHHHHHHHTT----CCSSEEEECTTCSSHHH
T ss_pred hCCCCeEEEE--CC-CCCCCCHHHHHHHHHHHHhcCCCEEECCCC-ccCHHHHHHHHhh----CCCCCEEecCCcCCHHH
Confidence 4667777762 12 233 7788888899999999998743332 2456677777651 368999999665 6788
Q ss_pred HHHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 175 ALRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 175 Al~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
+..+++. ++-|.|.|+.+|.-.. +..+++.|+++|+++=+|
T Consensus 262 ~~~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 262 AQHLMDYGRIGFIQIDCGRIGGLGP----------------------AKRVADAAQARGITYVNH 304 (401)
T ss_dssp HHHHHHHSCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHCCCCCEEEeCcchhCCHHH----------------------HHHHHHHHHHcCCEEecC
Confidence 8887754 9999999999987443 678999999999998666
No 81
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=90.98 E-value=0.75 Score=47.99 Aligned_cols=112 Identities=5% Similarity=0.016 Sum_probs=85.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (640)
+|.+.||+|= .|..-.|.+.+++-+++|.+.|.+.+==-++ ..+.+.++.|+++ +++|+++|=.+. +.-+.
T Consensus 190 ~g~~~~l~vD--an~~~~d~~~A~~~~~~l~~~~i~~iEqP~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 261 (374)
T 3sjn_A 190 AGPEMEVQID--LASKWHTCGHSAMMAKRLEEFNLNWIEEPVL-ADSLISYEKLSRQ-----VSQKIAGGESLTTRYEFQ 261 (374)
T ss_dssp HCSSSEEEEE--CTTTTCSHHHHHHHHHHSGGGCCSEEECSSC-TTCHHHHHHHHHH-----CSSEEEECTTCCHHHHHH
T ss_pred hCCCCeEEEE--CCCCCCCHHHHHHHHHHhhhcCceEEECCCC-cccHHHHHHHHhh-----CCCCEEeCCCcCCHHHHH
Confidence 5778888884 3433345888899999999999988864444 2356778888885 889999996654 66677
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
.+++. ++-|.+.|+..|.-.. ...+...|+++|+++=+|..
T Consensus 262 ~~l~~~~~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 262 EFITKSNADIVQPDITRCGGITE----------------------MKKIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp HHHHHHCCSEECCBTTTSSHHHH----------------------HHHHHHHHHHHTCEECCBCC
T ss_pred HHHHcCCCCEEEeCccccCCHHH----------------------HHHHHHHHHHcCCEEEecCC
Confidence 77654 9999999999987442 67899999999999866554
No 82
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=90.94 E-value=0.48 Score=48.73 Aligned_cols=109 Identities=10% Similarity=0.223 Sum_probs=83.1
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-||+|=- | ..-|.+.+++-+++|.+.|.+.+==-++ ..+.+.++++++. +++|+++|=.+ ++.-+.
T Consensus 186 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~iPI~~de~~~~~~~~~ 256 (359)
T 1mdl_A 186 VGDDFGIMVDY--N-QSLDVPAAIKRSQALQQEGVTWIEEPTL-QHDYEGHQRIQSK-----LNVPVQMGENWLGPEEMF 256 (359)
T ss_dssp HCSSSEEEEEC--T-TCSCHHHHHHHHHHHHHHTCSCEECCSC-TTCHHHHHHHHHT-----CSSCEEECTTCCSHHHHH
T ss_pred hCCCCEEEEEC--C-CCCCHHHHHHHHHHHHHhCCCeEECCCC-hhhHHHHHHHHHh-----CCCCEEeCCCCCCHHHHH
Confidence 56677787631 1 2346788888899999999988743333 2467788888874 78999999765 577777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.+++. ++-|.|.|+..|.-.. +..+++.|+++|+++=+|
T Consensus 257 ~~i~~~~~d~v~ik~~~~GGi~~----------------------~~~i~~~A~~~g~~~~~~ 297 (359)
T 1mdl_A 257 KALSIGACRLAMPDAMKIGGVTG----------------------WIRASALAQQFGIPMSSH 297 (359)
T ss_dssp HHHHTTCCSEECCBTTTTTHHHH----------------------HHHHHHHHHHTTCCBCCB
T ss_pred HHHHcCCCCEEeecchhhCCHHH----------------------HHHHHHHHHHcCCeEeec
Confidence 77665 9999999999988443 788999999999987555
No 83
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=90.80 E-value=0.69 Score=44.65 Aligned_cols=165 Identities=10% Similarity=0.126 Sum_probs=96.3
Q ss_pred HHHHHHHHHHcCCCEEEEec------CCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cCceeeCCCC
Q 006566 120 TVEEVMRIADQGADLVRITV------QGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDKIRVNPGN 191 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtv------p~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~KVRINPGN 191 (640)
.++.++++.++|++.+=+.. +.... +.++.|++. +++|+++.--+ +|.-+..+++. ++.|=+.-..
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~-----~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~ 107 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQA-----MDIKVELSGGIRDDDTLAAALATGCTRVNLGTAA 107 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHH-----CSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHh-----cCCcEEEECCcCCHHHHHHHHHcCCCEEEECchH
Confidence 45667888999999998764 33344 677888774 78999886433 47778888888 8888765443
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHH
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRK 271 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~ 271 (640)
+.+.. .+.+..+++|..+-+|++.-- .++. ..|-.... .+..|+++.+++
T Consensus 108 l~~p~-------------------------~~~~~~~~~g~~~~~~l~~~~--g~v~-~~g~~~~~--~~~~e~~~~~~~ 157 (244)
T 1vzw_A 108 LETPE-------------------------WVAKVIAEHGDKIAVGLDVRG--TTLR-GRGWTRDG--GDLYETLDRLNK 157 (244)
T ss_dssp HHCHH-------------------------HHHHHHHHHGGGEEEEEEEET--TEEC-CSSSCCCC--CBHHHHHHHHHH
T ss_pred hhCHH-------------------------HHHHHHHHcCCcEEEEEEccC--CEEE-EcCcccCC--CCHHHHHHHHHh
Confidence 33211 234445556656667775320 0111 22311000 034667777788
Q ss_pred CCCCcEEEEEEeCChh-----hHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHHHHHHHhhh
Q 006566 272 LDFHNFLFSMKASNPV-----VMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQD 336 (640)
Q Consensus 272 ~~F~diviSmKsSn~~-----~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAiGIG~LL~D 336 (640)
.|+.-|.+. +.+.. ...+.++.+.+. .+.|+-- +|=|++.-.+-.++.-
T Consensus 158 ~G~~~i~~~--~~~~~~~~~g~~~~~~~~i~~~-----~~ipvia---------~GGI~~~~d~~~~~~~ 211 (244)
T 1vzw_A 158 EGCARYVVT--DIAKDGTLQGPNLELLKNVCAA-----TDRPVVA---------SGGVSSLDDLRAIAGL 211 (244)
T ss_dssp TTCCCEEEE--EC-------CCCHHHHHHHHHT-----CSSCEEE---------ESCCCSHHHHHHHHTT
T ss_pred CCCCEEEEe--ccCcccccCCCCHHHHHHHHHh-----cCCCEEE---------ECCCCCHHHHHHHHhh
Confidence 999888764 21111 124555666554 5778643 3455555555555544
No 84
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=90.79 E-value=0.88 Score=48.35 Aligned_cols=109 Identities=8% Similarity=0.064 Sum_probs=81.0
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (640)
+|.+-||+|= .| ..-+.+.+++-+++|.+.|.+.+==-++- .+.+.+++|+++ +++|+.+|=.+. +.-+.
T Consensus 198 ~G~d~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEeP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 268 (412)
T 4e4u_A 198 VGSKADLLFG--TH-GQMVPSSAIRLAKRLEKYDPLWFEEPVPP-GQEEAIAQVAKH-----TSIPIATGERLTTKYEFH 268 (412)
T ss_dssp HTTSSEEEEC--CC-SCBCHHHHHHHHHHHGGGCCSEEECCSCS-SCHHHHHHHHHT-----CSSCEEECTTCCHHHHHH
T ss_pred hCCCCeEEEE--CC-CCCCHHHHHHHHHHhhhcCCcEEECCCCh-hhHHHHHHHHhh-----CCCCEEecCccCCHHHHH
Confidence 4667777772 12 23467888888899999998887644442 356778888884 889999996654 66666
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.+++. ++-|.+.|+..|.-.. ...+...|+++|+++=++
T Consensus 269 ~~i~~~a~d~v~~d~~~~GGit~----------------------~~kia~~A~~~gi~v~~h 309 (412)
T 4e4u_A 269 KLLQAGGASILQLNVARVGGLLE----------------------AKKIATLAEVHYAQIAPH 309 (412)
T ss_dssp HHHHTTCCSEECCCTTTTTSHHH----------------------HHHHHHHHHHTTCEECCC
T ss_pred HHHHcCCCCEEEeCccccCCHHH----------------------HHHHHHHHHHcCCEEEec
Confidence 66654 9999999999987442 678999999999997443
No 85
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=90.61 E-value=0.85 Score=47.61 Aligned_cols=109 Identities=13% Similarity=0.080 Sum_probs=79.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (640)
+|.+-||+|=- | ..-+.+.+++-+++|.+.|.+.+==-+| ..+.+.+++++++ +++|+++|=.+. +.-+.
T Consensus 196 ~G~d~~l~vD~--n-~~~~~~~a~~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 266 (392)
T 2poz_A 196 AGPEIELMVDL--S-GGLTTDETIRFCRKIGELDICFVEEPCD-PFDNGALKVISEQ-----IPLPIAVGERVYTRFGFR 266 (392)
T ss_dssp HCTTSEEEEEC--T-TCSCHHHHHHHHHHHGGGCEEEEECCSC-TTCHHHHHHHHHH-----CSSCEEECTTCCHHHHHH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhcCCCEEECCCC-cccHHHHHHHHhh-----CCCCEEecCCcCCHHHHH
Confidence 46667777621 1 2346788888888888888766532222 2467788888885 789999997764 67777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.+++. ++-|.|.|..+|.-.. ...++..|+++|+++=+|
T Consensus 267 ~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~g~~~~~h 307 (392)
T 2poz_A 267 KIFELQACGIIQPDIGTAGGLME----------------------TKKICAMAEAYNMRVAPH 307 (392)
T ss_dssp HHHTTTCCSEECCCTTTSSCHHH----------------------HHHHHHHHHTTTCEECCC
T ss_pred HHHHcCCCCEEecCccccCCHHH----------------------HHHHHHHHHHcCCeEecC
Confidence 77754 9999999999988443 678999999999987553
No 86
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=90.56 E-value=8 Score=39.36 Aligned_cols=161 Identities=9% Similarity=0.069 Sum_probs=96.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHHHHhhh--cCceeeC
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAEC--FDKIRVN 188 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al~Aa~~--v~KVRIN 188 (640)
...++.-++=+++|.++|.+.|=++.| +.++.+.++.|++.+ ++..+...+.-. -+-..|++|+.. ++.|+|-
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~--~~~~i~~l~~~~~~di~~a~~~~~~ag~~~v~i~ 100 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAI--KHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIF 100 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHC--CSSEEEEEEESSHHHHHHHHHHHTTCSSEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhc--CCCEEEEEecCCHHHHHHHHHHHhhcCCCEEEEE
Confidence 456788899999999999999999977 467888999998863 233332222111 012445554432 4445531
Q ss_pred -CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhC-CChHHHHHHHHHHH
Q 006566 189 -PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG-DSPRGMVESAFEFA 266 (640)
Q Consensus 189 -PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryG-dtp~gMVeSAle~~ 266 (640)
|-+=...++ ++..| .+..-+.+.++|+.||++|..++.+. ++- + .+| +-.++.+
T Consensus 101 ~~~Sd~~~~~---nl~~s-------~~e~l~~~~~~v~~a~~~g~~v~~~~-----~d~-----~~~~~----~~~~~~~ 156 (293)
T 3ewb_X 101 LATSDVHMEY---KLKMS-------RAEVLASIKHHISYARQKFDVVQFSP-----EDA-----TRSDR----AFLIEAV 156 (293)
T ss_dssp EECSHHHHHH---TTCCC-------HHHHHHHHHHHHHHHHTTCSCEEEEE-----ETG-----GGSCH----HHHHHHH
T ss_pred ecCcHHHHHH---HhCCC-------HHHHHHHHHHHHHHHHhCCCEEEEEe-----ccC-----CCCCH----HHHHHHH
Confidence 111000000 11112 33445568889999999999998765 221 2 234 4566777
Q ss_pred HHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHH
Q 006566 267 RICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302 (640)
Q Consensus 267 ~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~ 302 (640)
+.+.+.|-+ .|+++-+.=..+=..++.+++.+.+
T Consensus 157 ~~~~~~G~~--~i~l~DT~G~~~P~~v~~lv~~l~~ 190 (293)
T 3ewb_X 157 QTAIDAGAT--VINIPDTVGYTNPTEFGQLFQDLRR 190 (293)
T ss_dssp HHHHHTTCC--EEEEECSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCC--EEEecCCCCCCCHHHHHHHHHHHHH
Confidence 888888987 5788887644444444555555433
No 87
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=90.54 E-value=0.69 Score=48.52 Aligned_cols=109 Identities=11% Similarity=0.073 Sum_probs=80.9
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-+|+|=- | ..-+.+.+++-+++|.+.|.+.+==-++ ..+.+.+++|+++ +++|+++|=.+ ++.-+.
T Consensus 215 ~G~d~~l~vDa--n-~~~~~~~ai~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 285 (410)
T 2gl5_A 215 MGDDADIIVEI--H-SLLGTNSAIQFAKAIEKYRIFLYEEPIH-PLNSDNMQKVSRS-----TTIPIATGERSYTRWGYR 285 (410)
T ss_dssp HCSSSEEEEEC--T-TCSCHHHHHHHHHHHGGGCEEEEECSSC-SSCHHHHHHHHHH-----CSSCEEECTTCCTTHHHH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhcCCCeEECCCC-hhhHHHHHHHHhh-----CCCCEEecCCcCCHHHHH
Confidence 46667777621 1 2346788888889999988776532232 2467888888885 78999999665 677777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.+++. ++-|.|.|...|.-.. ...++..|+++|+++=+|
T Consensus 286 ~~i~~~~~d~v~ik~~~~GGit~----------------------~~~ia~~A~~~gi~~~~h 326 (410)
T 2gl5_A 286 ELLEKQSIAVAQPDLCLCGGITE----------------------GKKICDYANIYDTTVQVH 326 (410)
T ss_dssp HHHHTTCCSEECCCTTTTTHHHH----------------------HHHHHHHHHTTTCEECCC
T ss_pred HHHHcCCCCEEecCccccCCHHH----------------------HHHHHHHHHHcCCeEeec
Confidence 77754 9999999999988442 678999999999997443
No 88
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=90.49 E-value=1.4 Score=46.49 Aligned_cols=101 Identities=14% Similarity=0.196 Sum_probs=78.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEE-EEecCC-----HHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHHHHhhh--cCce
Q 006566 115 KDVAGTVEEVMRIADQGADLV-RITVQG-----KREADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAEC--FDKI 185 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiV-Rvtvp~-----~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al~Aa~~--v~KV 185 (640)
-|.+..++-+++|.+.|-.|+ -|-=|= .++-+.+..++++|+++|+++||++|=. +++.-...+++. ++-|
T Consensus 249 ~~~~~a~~~~~~L~~~~~~i~~~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~v 328 (413)
T 1kcz_A 249 VDIKAMADYIQTLAEAAKPFHLRIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMV 328 (413)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCEEEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSEE
T ss_pred CCHHHHHHHHHHHHhhcCCcceEEecCCCCCCCcccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCCEE
Confidence 367888888899998832233 455443 5688999999999988899999999955 566666666654 9999
Q ss_pred eeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 186 RINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.|.|..+|.-.. ...++..|+++|+++=+|
T Consensus 329 ~ik~~~~GGit~----------------------a~~i~~~A~~~gi~~~~~ 358 (413)
T 1kcz_A 329 QIKTPDLGGVNN----------------------IADAIMYCKANGMGAYCG 358 (413)
T ss_dssp EECTGGGSSTHH----------------------HHHHHHHHHHTTCEEEEC
T ss_pred EeCccccCCHHH----------------------HHHHHHHHHHcCCEEEec
Confidence 999999987432 678999999999998665
No 89
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=90.48 E-value=1.5 Score=45.47 Aligned_cols=113 Identities=18% Similarity=0.186 Sum_probs=82.5
Q ss_pred ecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHH
Q 006566 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVA 175 (640)
Q Consensus 97 ~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~A 175 (640)
.+|.+-+++|= .|. .-|.+.+++-+++|.+.|.+.+==-++. .+.+.+..++++ +++|+++|=. +++.-+
T Consensus 184 ~~g~~~~l~vD--an~-~~~~~~a~~~~~~l~~~~i~~iEqP~~~-~~~~~~~~l~~~-----~~iPia~dE~~~~~~~~ 254 (370)
T 1chr_A 184 SLGSKAYLRVD--VNQ-AWDEQVASVYIPELEALGVELIEQPVGR-ENTQALRRLSDN-----NRVAIMADESLSTLASA 254 (370)
T ss_dssp HSSTTCCEEEE--CTT-CCCTTHHHHHTHHHHTTTEEEEECCSCT-TCHHHHHHHHHH-----SCSEEEESSSCCSHHHH
T ss_pred hcCCCCEEEEE--CCC-CCCHHHHHHHHHHHHhcCCCEEECCCCc-ccHHHHHHHHhh-----CCCCEEeCCCcCCHHHH
Confidence 35777888884 222 2345677777888988887765422332 356778888885 7899999965 457777
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCC
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNh 240 (640)
..+++. ++-|.+.|+..|.-.. ...+...|+++|+++=+|.+.
T Consensus 255 ~~~~~~~~~d~v~~k~~~~GGit~----------------------~~~i~~~A~~~g~~~~~~~~~ 299 (370)
T 1chr_A 255 FDLARDRSVDVFSLKLCNMGGVSA----------------------TQKIAAVAEASGIASYGGTML 299 (370)
T ss_dssp HHHHTTTSCSEEEECTTTSCSHHH----------------------HHHHHHHHHHHTCEEEECCSC
T ss_pred HHHHHcCCCCEEEECccccCCHHH----------------------HHHHHHHHHHcCCeEEecCCC
Confidence 777654 9999999999998442 678999999999999777544
No 90
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=90.39 E-value=1.2 Score=47.36 Aligned_cols=102 Identities=14% Similarity=0.150 Sum_probs=80.2
Q ss_pred CCHHHHHHHHHHHHHcCCCE-EEEecCC-----HHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHHHHhh--hcCce
Q 006566 115 KDVAGTVEEVMRIADQGADL-VRITVQG-----KREADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAE--CFDKI 185 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGcei-VRvtvp~-----~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al~Aa~--~v~KV 185 (640)
-|.+..++-+++|.+.|..+ +-|-=|= .++-+.++.++++|.++|+++||++|=+ +++.-....++ +++-|
T Consensus 249 ~~~~~A~~~~~~L~~~~~~~~l~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i 328 (413)
T 1kko_A 249 MDPVRCAEYIASLEKEAQGLPLYIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMV 328 (413)
T ss_dssp TCHHHHHHHHHHTGGGGTTSCEEEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCHHHHHHHHHHHHhccCCcceEEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEE
Confidence 47788888889999877652 2666554 4788999999998888889999999965 45666666654 49999
Q ss_pred eeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 186 RINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.|.|..+|.-.. ..++++.|+++|+++=+|.
T Consensus 329 ~ik~~~~GGite----------------------a~~i~~~A~~~gi~~~~~~ 359 (413)
T 1kko_A 329 QIKTPDLGGIHN----------------------IVDAVLYCNKHGMEAYQGG 359 (413)
T ss_dssp EECGGGGSSTHH----------------------HHHHHHHHHHHTCEEEECC
T ss_pred EeCccccCCHHH----------------------HHHHHHHHHHcCCeEEecC
Confidence 999999987442 6789999999999986664
No 91
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=90.37 E-value=1.9 Score=44.41 Aligned_cols=114 Identities=12% Similarity=0.254 Sum_probs=77.9
Q ss_pred eEEEceeecCCCCc-eEEEeccCCCCCCHHHHHHHHHHHHHc----CCCEEEEe------------cCCHHHHHHHHHHH
Q 006566 90 TVMVGNVAIGSEHP-IRVQTMTTNDTKDVAGTVEEVMRIADQ----GADLVRIT------------VQGKREADACFEIK 152 (640)
Q Consensus 90 ~V~VG~v~IGG~~P-I~VQSMt~t~T~Dv~atv~Qi~rl~~a----GceiVRvt------------vp~~~~A~~l~~I~ 152 (640)
.|+||++.+|+++| +.|==.+... |.+..++-.++|.++ |..+|.-+ .+++.-.+.|+.++
T Consensus 4 ~~~~~~i~iG~~~~~~vIaGPCsie--~~~~~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~ 81 (288)
T 3tml_A 4 SMKLCDFEVGLDQPFFLIAGTCVVE--SEQMTIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILS 81 (288)
T ss_dssp CEEETTEEESTTSCCEEEEECSBCC--CHHHHHHHHHHHHHHHHHHTCCEEEECBC--------------CHHHHHHHHH
T ss_pred eEEECCEEECCCCceEEEEeCCcCC--CHHHHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHH
Confidence 58999999999985 5555444443 578888888888876 88877652 22322345555555
Q ss_pred HHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCC
Q 006566 153 NSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR 232 (640)
Q Consensus 153 ~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~ 232 (640)
+-.+ ...+|++.++|-.. -+..+++.++-+-|--+|+-+ .++++.+-..|.
T Consensus 82 ~~~~--e~Glp~~tev~d~~-~v~~l~~~vd~lkIgA~~~~n--------------------------~~LLr~~a~~gk 132 (288)
T 3tml_A 82 EVKR--QLGLPVLTDVHSID-EIEQVASVVDVLQTPAFLCRQ--------------------------TDFIHACARSGK 132 (288)
T ss_dssp HHHH--HHCCCEEEECCSGG-GHHHHHHHCSEEEECGGGTTC--------------------------HHHHHHHHTSSS
T ss_pred HHHH--hcCCeEEEEeCCHH-HHHHHHHhCCEEEECcccccC--------------------------HHHHHHHHccCC
Confidence 5433 36799999996544 444556779999998888865 235667778899
Q ss_pred eE
Q 006566 233 AV 234 (640)
Q Consensus 233 aI 234 (640)
||
T Consensus 133 PV 134 (288)
T 3tml_A 133 PV 134 (288)
T ss_dssp CE
T ss_pred cE
Confidence 98
No 92
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=90.31 E-value=1.9 Score=40.67 Aligned_cols=90 Identities=19% Similarity=0.221 Sum_probs=65.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceee--ccCCCHHHHHHHhhh-cCceeeCCCC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA--DIHFAPSVALRVAEC-FDKIRVNPGN 191 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVA--DIHF~~~~Al~Aa~~-v~KVRINPGN 191 (640)
.|.+..+++++++.++|++.|=++..+....+.++++++. +++|++- .--.++.-+..|+++ ++-|- -|+
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~-----~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~--~~~ 88 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDA-----YGDKALIGAGTVLKPEQVDALARMGCQLIV--TPN 88 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHH-----HTTTSEEEEECCCSHHHHHHHHHTTCCEEE--CSS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHh-----CCCCeEEEeccccCHHHHHHHHHcCCCEEE--eCC
Confidence 4677888999999999999999998888777788888774 5666654 223356667777777 88775 222
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
. . .++++.|+++|..+-+|+
T Consensus 89 ~---~------------------------~~~~~~~~~~g~~~~~g~ 108 (212)
T 2v82_A 89 I---H------------------------SEVIRRAVGYGMTVCPGC 108 (212)
T ss_dssp C---C------------------------HHHHHHHHHTTCEEECEE
T ss_pred C---C------------------------HHHHHHHHHcCCCEEeec
Confidence 1 1 246789999998887774
No 93
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=90.28 E-value=1.7 Score=44.54 Aligned_cols=108 Identities=15% Similarity=0.131 Sum_probs=80.9
Q ss_pred CCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCC--EEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHH
Q 006566 99 GSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGAD--LVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175 (640)
Q Consensus 99 GG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGce--iVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~A 175 (640)
|.+-+++| .. | ..-+.+.+++-+++|.+.|.+ ++==-+| ..+.+.+++++++ +++|+++|=.+ ++.-+
T Consensus 180 g~~~~l~v-Da-n-~~~~~~~a~~~~~~l~~~~i~~~~iE~P~~-~~~~~~~~~l~~~-----~~ipia~dE~~~~~~~~ 250 (345)
T 2zad_A 180 TRGAKYIV-DA-N-MGYTQKEAVEFARAVYQKGIDIAVYEQPVR-REDIEGLKFVRFH-----SPFPVAADESARTKFDV 250 (345)
T ss_dssp STTCEEEE-EC-T-TCSCHHHHHHHHHHHHHTTCCCSEEECCSC-TTCHHHHHHHHHH-----SSSCEEESTTCCSHHHH
T ss_pred CCCCeEEE-EC-C-CCCCHHHHHHHHHHHHhcCCCeeeeeCCCC-cccHHHHHHHHHh-----CCCCEEEeCCcCCHHHH
Confidence 66778877 22 2 234678888889999999988 7543333 2567888888885 68999999664 67777
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
..+++. ++-|.|.|+. |.-.. ...+++.|+++|+++=+|.
T Consensus 251 ~~~i~~~~~d~v~ik~~~-GGit~----------------------~~~i~~~A~~~g~~~~~~~ 292 (345)
T 2zad_A 251 MRLVKEEAVDYVNIKLMK-SGISD----------------------ALAIVEIAESSGLKLMIGC 292 (345)
T ss_dssp HHHHHHTCCSEEEECHHH-HHHHH----------------------HHHHHHHHHTTTCEEEECC
T ss_pred HHHHHhCCCCEEEEeccc-ccHHH----------------------HHHHHHHHHHcCCeEEEec
Confidence 777754 9999999988 76332 6788999999999987764
No 94
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=90.21 E-value=0.47 Score=49.56 Aligned_cols=108 Identities=9% Similarity=0.075 Sum_probs=81.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-||+|= .| ..-+.+.+++-+++|.+.|.+.+==-++ ..+.+.+++|+++ +++|+++|=.+ ++.-+.
T Consensus 205 ~g~d~~l~vD--an-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPI~~dE~~~~~~~~~ 275 (388)
T 2nql_A 205 LGPQAKIAAD--MH-WNQTPERALELIAEMQPFDPWFAEAPVW-TEDIAGLEKVSKN-----TDVPIAVGEEWRTHWDMR 275 (388)
T ss_dssp HCTTSEEEEE--CC-SCSCHHHHHHHHHHHGGGCCSCEECCSC-TTCHHHHHHHHTS-----CCSCEEECTTCCSHHHHH
T ss_pred hCCCCEEEEE--CC-CCCCHHHHHHHHHHHhhcCCCEEECCCC-hhhHHHHHHHHhh-----CCCCEEEeCCcCCHHHHH
Confidence 6778888873 12 3457888899999999999988742222 3467778888774 78999999665 688888
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.+++. ++-|.|.|+. |.-.. +..+++.|+++|+++=+|
T Consensus 276 ~~i~~~~~d~v~ik~~~-GGit~----------------------~~~i~~~A~~~g~~~~~h 315 (388)
T 2nql_A 276 ARIERCRIAIVQPEMGH-KGITN----------------------FIRIGALAAEHGIDVIPH 315 (388)
T ss_dssp HHHTTSCCSEECCCHHH-HCHHH----------------------HHHHHHHHHHHTCEECCC
T ss_pred HHHHcCCCCEEEecCCC-CCHHH----------------------HHHHHHHHHHcCCeEEee
Confidence 88865 9999999988 77442 778999999999987443
No 95
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=90.18 E-value=0.83 Score=47.26 Aligned_cols=110 Identities=11% Similarity=0.126 Sum_probs=81.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHH-HHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRI-ADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVA 175 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl-~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~A 175 (640)
+|.+-||+|=- ...-+.+.+++-+++| .+.|. .+= -|-. +.+.+++|+++ +++|+++|=. +++.-+
T Consensus 187 ~g~~~~l~vDa---n~~~~~~~a~~~~~~l~~~~~i-~iE--~P~~-~~~~~~~l~~~-----~~iPI~~dE~~~~~~~~ 254 (371)
T 2ps2_A 187 QQPDEFFIVDA---NGKLSVETALRLLRLLPHGLDF-ALE--APCA-TWRECISLRRK-----TDIPIIYDELATNEMSI 254 (371)
T ss_dssp CCTTCEEEEEC---TTBCCHHHHHHHHHHSCTTCCC-EEE--CCBS-SHHHHHHHHTT-----CCSCEEESTTCCSHHHH
T ss_pred cCCCCEEEEEC---CCCcCHHHHHHHHHHHHhhcCC-cCc--CCcC-CHHHHHHHHhh-----CCCCEEeCCCcCCHHHH
Confidence 56677776631 1234678888888888 88887 653 3332 67777888774 7899999965 468888
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCC
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhG 241 (640)
..+++. ++-|.|.|+..|.-.. ...+.+.|+++|+++=+|...+
T Consensus 255 ~~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~g~~~~~~~~~e 300 (371)
T 2ps2_A 255 VKILADDAAEGIDLKISKAGGLTR----------------------GRRQRDICLAAGYSVSVQETCG 300 (371)
T ss_dssp HHHHHHTCCSEEEEEHHHHTSHHH----------------------HHHHHHHHHHHTCEEEEECSSC
T ss_pred HHHHHhCCCCEEEechhhcCCHHH----------------------HHHHHHHHHHcCCeEEecCCCc
Confidence 877665 9999999999987443 6789999999999997776443
No 96
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=90.16 E-value=1.9 Score=42.38 Aligned_cols=106 Identities=18% Similarity=0.215 Sum_probs=66.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH--------------------HHHHHHHHHHHhhcCCCCcceeeccCCC
Q 006566 112 NDTKDVAGTVEEVMRIADQGADLVRITVQGKR--------------------EADACFEIKNSLVQKNYNIPLVADIHFA 171 (640)
Q Consensus 112 t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~--------------------~A~~l~~I~~~L~~~g~~iPLVADIHF~ 171 (640)
+...|.+.+++.++++.++|+|+|=+-+|-.+ ..+.+.++.+++++. +++|++.-..+|
T Consensus 26 ~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~ 104 (262)
T 1rd5_A 26 AGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYK 104 (262)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCc
Confidence 44446689999999999999999988764220 112222333445554 789998755555
Q ss_pred HHH---HHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCC
Q 006566 172 PSV---ALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (640)
Q Consensus 172 ~~~---Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSL 243 (640)
|-. ...|+++ ++-|=+....+ +...++++.||++|+..=++++.-+.
T Consensus 105 ~~~~~~~~~a~~aGadgv~v~d~~~-------------------------~~~~~~~~~~~~~g~~~i~~~a~~t~ 155 (262)
T 1rd5_A 105 PIMFRSLAKMKEAGVHGLIVPDLPY-------------------------VAAHSLWSEAKNNNLELVLLTTPAIP 155 (262)
T ss_dssp HHHSCCTHHHHHTTCCEEECTTCBT-------------------------TTHHHHHHHHHHTTCEECEEECTTSC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCh-------------------------hhHHHHHHHHHHcCCceEEEECCCCC
Confidence 522 1125555 77666632211 12567888999999987777765443
No 97
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=90.10 E-value=0.75 Score=48.73 Aligned_cols=106 Identities=11% Similarity=-0.014 Sum_probs=80.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (640)
+|.+.||+|= .| ..-+.+.+++-+++|.+.|.+++=. |- .+.+.++.|+++ +++|+++|=.+. +.-+.
T Consensus 210 vG~d~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iE~--P~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 278 (409)
T 3go2_A 210 AGPDVEILLD--LN-FNAKPEGYLKILRELADFDLFWVEI--DS-YSPQGLAYVRNH-----SPHPISSCETLFGIREFK 278 (409)
T ss_dssp HCTTSEEEEE--CT-TCSCHHHHHHHHHHTTTSCCSEEEC--CC-SCHHHHHHHHHT-----CSSCEEECTTCCHHHHHH
T ss_pred hCCCCEEEEE--CC-CCCCHHHHHHHHHHHhhcCCeEEEe--Cc-CCHHHHHHHHhh-----CCCCEEeCCCcCCHHHHH
Confidence 5778888884 22 2357888888899999999998874 43 466778888884 889999996654 66777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.+++. ++-|.|.|.. |.-. ....+...|+++|+++=++
T Consensus 279 ~~i~~~~~d~v~~k~~~-GGit----------------------~~~~ia~~A~~~gi~~~~h 318 (409)
T 3go2_A 279 PFFDANAVDVAIVDTIW-NGVW----------------------QSMKIAAFADAHDINVAPH 318 (409)
T ss_dssp HHHHTTCCSEEEECHHH-HCHH----------------------HHHHHHHHHHHTTCEEEEC
T ss_pred HHHHhCCCCEEEeCCCC-CCHH----------------------HHHHHHHHHHHcCCEEeec
Confidence 77654 9999999977 6533 2678999999999999654
No 98
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=90.00 E-value=3.3 Score=46.23 Aligned_cols=136 Identities=12% Similarity=0.196 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHHHHcC-----CCEEEEec----CC------HHHHHHHHHHHHHhhc----CCCCcceeeccCCCHHHHH
Q 006566 116 DVAGTVEEVMRIADQG-----ADLVRITV----QG------KREADACFEIKNSLVQ----KNYNIPLVADIHFAPSVAL 176 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aG-----ceiVRvtv----p~------~~~A~~l~~I~~~L~~----~g~~iPLVADIHF~~~~Al 176 (640)
|.++.++++++++++| |+|+=|-. |+ .+|.+-+-.+.+.+++ .-.++||.-|- |++.+|.
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISIDT-~~a~Vae 325 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDT-YRSNVAK 325 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEEEC-CCHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeC-CcHHHHH
Confidence 8999999999999999 99999986 33 5666665555556664 23479999996 8899999
Q ss_pred HHhhh-cCcee-eCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHc-CCeEEEeeCCCCCcHhHHH--Hh
Q 006566 177 RVAEC-FDKIR-VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY-GRAVRIGTNHGSLSDRIMS--YY 251 (640)
Q Consensus 177 ~Aa~~-v~KVR-INPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~-g~aIRIGvNhGSLs~ril~--ry 251 (640)
+|+++ ++=|= |+=|++ |. .+.+.|+++ |+++=+--+.|- ++.+-. .|
T Consensus 326 aAl~aGadIINDVsg~~~-d~--------------------------~m~~vva~~~~~~vVlmH~rG~-p~tm~~~~~y 377 (545)
T 2bmb_A 326 EAIKVGVDIINDISGGLF-DS--------------------------NMFAVIAENPEICYILSHTRGD-ISTMNRLAHY 377 (545)
T ss_dssp HHHHTTCCEEEETTTTSS-CT--------------------------THHHHHHTCTTSEEEEECCCSC-TTTGGGCCCC
T ss_pred HHHHcCCCEEEeCCCCcC-Ch--------------------------HHHHHHHHhCCCeEEEECCCCC-CCCccccccc
Confidence 99998 55543 334443 32 256778899 999966655553 222111 24
Q ss_pred CCC----------------------------hHHHHHHHHHHHHHHHHCCCC--cEEEE
Q 006566 252 GDS----------------------------PRGMVESAFEFARICRKLDFH--NFLFS 280 (640)
Q Consensus 252 Gdt----------------------------p~gMVeSAle~~~i~e~~~F~--diviS 280 (640)
.+. -+.+.+...+-++.|++.|+. +|+|-
T Consensus 378 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vv~~v~~~l~~~i~~a~~~GI~~~~IilD 436 (545)
T 2bmb_A 378 ENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQEIGERYIKAIDNGVKRWQILID 436 (545)
T ss_dssp SSCTTTTTEEEEEETTEEGGGSTTHHHHCHHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred cccccccccchhccccccccccccccccchHHHHHHHHHHHHHHHHHHcCCCHHHEEEe
Confidence 421 134555666778899999997 78874
No 99
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=89.83 E-value=0.94 Score=47.87 Aligned_cols=109 Identities=12% Similarity=0.118 Sum_probs=80.5
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-||+|= .| ..-+.+.+++-+++|.+.|.+.+==-++ ..+.+.++.|+++ +++|+++|=.+ ++.-+.
T Consensus 205 ~G~d~~l~vD--an-~~~~~~~A~~~~~~l~~~~i~~iEeP~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 275 (404)
T 4e5t_A 205 VGTKADLLFG--TH-GQFTVSGAKRLARRLEAYDPLWFEEPIP-PEKPEDMAEVARY-----TSIPVATGERLCTKYEFS 275 (404)
T ss_dssp HGGGSEEEEC--CC-SCBCHHHHHHHHHHHGGGCCSEEECCSC-TTCHHHHHHHHHH-----CSSCEEECTTCCHHHHHH
T ss_pred cCCCCeEEEe--CC-CCcCHHHHHHHHHHHhhcCCcEEECCCC-cccHHHHHHHHhh-----CCCCEEeCCCcCCHHHHH
Confidence 3556666662 12 2346788888889999999988864344 2356778888885 78999999665 466666
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.+++. ++-|.+.|+..|.-.. ...+...|+++|+++=++
T Consensus 276 ~~i~~~a~d~v~~d~~~~GGit~----------------------~~~ia~~A~~~gi~~~~h 316 (404)
T 4e5t_A 276 RVLETGAASILQMNLGRVGGLLE----------------------AKKIAAMAECHSAQIAPH 316 (404)
T ss_dssp HHHHHTCCSEECCCTTTSSCHHH----------------------HHHHHHHHHHTTCEECCC
T ss_pred HHHHhCCCCEEecCccccCCHHH----------------------HHHHHHHHHHcCCEEeec
Confidence 66654 9999999999988443 678999999999998433
No 100
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=89.78 E-value=1.8 Score=45.70 Aligned_cols=111 Identities=12% Similarity=0.114 Sum_probs=82.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+-|++|= .| ..-+.+.+++-+++|.+.|.+++==-++ ..+.+.+..++++ +++|+.+|=. +++.-+.
T Consensus 188 ~g~~~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 258 (393)
T 4dwd_A 188 LGPDAVIGFD--AN-NGYSVGGAIRVGRALEDLGYSWFEEPVQ-HYHVGAMGEVAQR-----LDITVSAGEQTYTLQALK 258 (393)
T ss_dssp HCTTCCEEEE--CT-TCCCHHHHHHHHHHHHHTTCSEEECCSC-TTCHHHHHHHHHH-----CSSEEEBCTTCCSHHHHH
T ss_pred hCCCCeEEEE--CC-CCCCHHHHHHHHHHHHhhCCCEEECCCC-cccHHHHHHHHhh-----CCCCEEecCCcCCHHHHH
Confidence 5777788873 22 2345777888888999999888764343 2356778888875 8899999955 4566666
Q ss_pred HHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 177 RVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 177 ~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
.+++. ++-|.|.|+..|.-.. ...+...|+++|+++=+|..
T Consensus 259 ~~i~~~~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 259 DLILSGVRMVQPDIVKMGGITG----------------------MMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp HHHHHTCCEECCCTTTTTHHHH----------------------HHHHHHHHHHHTCEECCCCC
T ss_pred HHHHcCCCEEEeCccccCCHHH----------------------HHHHHHHHHHcCCEEeecCC
Confidence 65444 9999999999987442 67899999999999866654
No 101
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=89.76 E-value=1.6 Score=43.00 Aligned_cols=91 Identities=16% Similarity=0.269 Sum_probs=73.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFA 193 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~~ 193 (640)
.|.+..++.++++.+.|.++|=++..+....+.++++++++. ++-+-|+.=+++.-+..|+++ ++-| +-|+.
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~----~l~vgaGtvl~~d~~~~A~~aGAd~v-~~p~~-- 98 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRP----DFLIAAGTVLTAEQVVLAKSSGADFV-VTPGL-- 98 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT----TCEEEEESCCSHHHHHHHHHHTCSEE-ECSSC--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCc----CcEEeeCcEeeHHHHHHHHHCCCCEE-EECCC--
Confidence 456678899999999999999999988888888888888732 466777877788888888888 8877 44531
Q ss_pred chhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 194 d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
| .++++.|+++|.++=+|+
T Consensus 99 d--------------------------~~v~~~ar~~g~~~i~Gv 117 (224)
T 1vhc_A 99 N--------------------------PKIVKLCQDLNFPITPGV 117 (224)
T ss_dssp C--------------------------HHHHHHHHHTTCCEECEE
T ss_pred C--------------------------HHHHHHHHHhCCCEEecc
Confidence 1 457899999999998986
No 102
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=89.68 E-value=0.47 Score=49.15 Aligned_cols=154 Identities=19% Similarity=0.218 Sum_probs=92.8
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeC----CCCCCch
Q 006566 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVN----PGNFADR 195 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRIN----PGN~~d~ 195 (640)
..+...|+++|+|+|=-| ....-|+-...|. +..+++|+|||++ |..=|+.+++. ++=||.- -||+...
T Consensus 80 ~~EAqilea~GaD~IDes-evltpad~~~~I~----k~~f~vpfv~~~~-~l~EAlrri~eGA~mIrTtge~gtg~v~~a 153 (291)
T 3o07_A 80 FVEAQIIEALEVDYIDES-EVLTPADWTHHIE----KDKFKVPFVCGAK-DLGEALRRINEGAAMIRTKGEAGTGDVSEA 153 (291)
T ss_dssp HHHHHHHHHTTCSEEEEE-TTSCCSCSSCCCC----GGGCSSCEEEEES-SHHHHHHHHHHTCSEEEECCCTTSCCTHHH
T ss_pred HHHHHHHHHcCCCEEecc-cCCCHHHHHHHhh----hhcCCCcEEeeCC-CHHHHHHHHHCCCCEEEecCcCCCccHHHH
Confidence 788899999999999322 2222233333444 4468899999997 56667777777 9999974 6787664
Q ss_pred hhhccc--------ccc-chHH-HHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHH
Q 006566 196 RAQFEQ--------LEY-TDDE-YQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 265 (640)
Q Consensus 196 ~k~F~~--------~eY-tdee-Y~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~ 265 (640)
-+.... .-| |++| |.. -..+..-+.-+-+.++.-.+|+=+=.|.| + .||+ .
T Consensus 154 v~h~r~~~~~i~~l~g~~t~~el~~~-a~~~~ad~elI~~Ike~~~IPVV~IAnGG-I---------~Tpe--------d 214 (291)
T 3o07_A 154 VKHIRRITEEIKACQQLKSEDDIAKV-AEEMRVPVSLLKDVLEKGKLPVVNFAAGG-V---------ATPA--------D 214 (291)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHH-HHHHTSCHHHHHHHHHHTSCSSCEEBCSS-C---------CSHH--------H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhhc-ccccCCCHHHHHHHHHccCCCEEEecCCC-C---------CCHH--------H
Confidence 332221 146 8776 322 12223333333333333455641101433 2 2452 2
Q ss_pred HHHHHHCCCCcEEEE---EEeCChhhHHHHHHHHHHH
Q 006566 266 ARICRKLDFHNFLFS---MKASNPVVMVQAYRLLVAE 299 (640)
Q Consensus 266 ~~i~e~~~F~diviS---mKsSn~~~mV~AyRlL~~~ 299 (640)
+.-|-+.|.+-+.|- +||.||..+.++++..++.
T Consensus 215 A~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~Av~~ 251 (291)
T 3o07_A 215 AALLMQLGCDGVFVGSGIFKSSNPVRLATAVVEATTH 251 (291)
T ss_dssp HHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHHHHHh
Confidence 222336788888875 8999999999999887776
No 103
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=89.66 E-value=4.2 Score=40.02 Aligned_cols=122 Identities=13% Similarity=0.142 Sum_probs=86.9
Q ss_pred eEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeec---------cCCCHH-
Q 006566 104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVAD---------IHFAPS- 173 (640)
Q Consensus 104 I~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVAD---------IHF~~~- 173 (640)
++.|.-...+-++.+--++..+...++|+.-+|+. + -+.+++||+. +++|+++. +.-+|.
T Consensus 22 vscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~--~---~~~i~~ir~~-----v~~Pvig~~k~~~~~~~~~I~~~~ 91 (229)
T 3q58_A 22 VSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIE--G---IENLRTVRPH-----LSVPIIGIIKRDLTGSPVRITPYL 91 (229)
T ss_dssp EECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEEEE--S---HHHHHHHGGG-----CCSCEEEECBCCCSSCCCCBSCSH
T ss_pred EEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEEEC--C---HHHHHHHHHh-----cCCCEEEEEeecCCCCceEeCccH
Confidence 56688888889999999999999999999999985 2 4567888874 88998743 333443
Q ss_pred -HHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHh
Q 006566 174 -VALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYY 251 (640)
Q Consensus 174 -~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ry 251 (640)
-+.++.+. +|.|=++=....++. .+.++++.||++|..+ +++..
T Consensus 92 ~~i~~~~~aGad~I~l~~~~~~~p~----------------------~l~~~i~~~~~~g~~v--~~~v~---------- 137 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDASFRSRPV----------------------DIDSLLTRIRLHGLLA--MADCS---------- 137 (229)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSS----------------------CHHHHHHHHHHTTCEE--EEECS----------
T ss_pred HHHHHHHHcCCCEEEECccccCChH----------------------HHHHHHHHHHHCCCEE--EEecC----------
Confidence 45667777 888865444322222 2778999999998776 44221
Q ss_pred CCChHHHHHHHHHHHHHHHHCCCCcEEE
Q 006566 252 GDSPRGMVESAFEFARICRKLDFHNFLF 279 (640)
Q Consensus 252 Gdtp~gMVeSAle~~~i~e~~~F~divi 279 (640)
..|+++.+++.|++-|.+
T Consensus 138 ----------t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 138 ----------TVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp ----------SHHHHHHHHHTTCSEEEC
T ss_pred ----------CHHHHHHHHhCCCCEEEe
Confidence 245667788889886643
No 104
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=89.65 E-value=1.3 Score=41.72 Aligned_cols=96 Identities=15% Similarity=0.142 Sum_probs=68.5
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEecCC-H-HHHHHHHHHHHHhhcCCCCcceeeccCCC--HHH-HHHHhhh-cCc
Q 006566 111 TNDTKDVAGTVEEVMRIADQGADLVRITVQG-K-READACFEIKNSLVQKNYNIPLVADIHFA--PSV-ALRVAEC-FDK 184 (640)
Q Consensus 111 ~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~-~-~~A~~l~~I~~~L~~~g~~iPLVADIHF~--~~~-Al~Aa~~-v~K 184 (640)
..|..|.+.+++.++++. .|+|++=+..|. . .-.+.++.||+ ...++|+.+|.++. ++. +..|+++ ++-
T Consensus 6 a~D~~~~~~~~~~~~~~~-~~~diie~G~p~~~~~g~~~i~~ir~----~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~ 80 (211)
T 3f4w_A 6 ALDELTLPEAMVFMDKVV-DDVDIIEVGTPFLIREGVNAIKAIKE----KYPHKEVLADAKIMDGGHFESQLLFDAGADY 80 (211)
T ss_dssp EECSCCHHHHHHHHHHHG-GGCSEEEECHHHHHHHTTHHHHHHHH----HCTTSEEEEEEEECSCHHHHHHHHHHTTCSE
T ss_pred EeCCCCHHHHHHHHHHhh-cCccEEEeCcHHHHhccHHHHHHHHH----hCCCCEEEEEEEeccchHHHHHHHHhcCCCE
Confidence 346788999999999996 699999998865 2 22344555554 34579999998765 555 7888888 888
Q ss_pred eeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEE
Q 006566 185 IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (640)
Q Consensus 185 VRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIR 235 (640)
|=+ |+.-.. +.+.++++.||++|..+=
T Consensus 81 v~v-~~~~~~-----------------------~~~~~~~~~~~~~g~~~~ 107 (211)
T 3f4w_A 81 VTV-LGVTDV-----------------------LTIQSCIRAAKEAGKQVV 107 (211)
T ss_dssp EEE-ETTSCH-----------------------HHHHHHHHHHHHHTCEEE
T ss_pred EEE-eCCCCh-----------------------hHHHHHHHHHHHcCCeEE
Confidence 887 322111 236789999999997653
No 105
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=89.57 E-value=6.3 Score=40.40 Aligned_cols=171 Identities=9% Similarity=0.071 Sum_probs=101.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec-------CCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCce
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITV-------QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKI 185 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtv-------p~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KV 185 (640)
...++.-++=+++|.++|.+.|=++. |-+.+++. +.+.+.+. -++++.+=. -|.+-...|+++ ++.|
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~---~~~~~~~~-~~~~~~~l~-~~~~~i~~a~~~g~~~v 98 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAID---VAKGIDRE-KGVTYAALV-PNQRGLENALEGGINEA 98 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHH---HHHHSCCC-TTCEEEEEC-CSHHHHHHHHHHTCSEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHH---HHHHhhhc-CCCeEEEEe-CCHHhHHHHHhCCcCEE
Confidence 35778889999999999999999983 44445542 33344433 345554433 266667778888 9999
Q ss_pred eeC-CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCC-CCCcHhHHHHhCC-ChHHHHHHH
Q 006566 186 RVN-PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH-GSLSDRIMSYYGD-SPRGMVESA 262 (640)
Q Consensus 186 RIN-PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNh-GSLs~ril~ryGd-tp~gMVeSA 262 (640)
||- +-|=...+++ +.- -.+..-+.+.+.|+.||++|..+|..+-. -|-++. |. +| +-.
T Consensus 99 ~i~~~~sd~~~~~~---l~~-------s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~-----~~~~~----~~~ 159 (307)
T 1ydo_A 99 CVFMSASETHNRKN---INK-------STSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYE-----KDVPI----EQV 159 (307)
T ss_dssp EEEEESSHHHHHTT---TCS-------CHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTT-----BCCCH----HHH
T ss_pred EEEeecCHHHHHHH---hCC-------CHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcC-----CCCCH----HHH
Confidence 963 1111000111 111 13444556788999999999999854421 111111 22 44 456
Q ss_pred HHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCC-CcceEE
Q 006566 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW-DYPLHL 311 (640)
Q Consensus 263 le~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~-dyPLHL 311 (640)
++.++.+.+.|-+ .|+++-+.=..+=..++.+++.+.++ + +-||++
T Consensus 160 ~~~~~~~~~~Ga~--~i~l~DT~G~~~P~~v~~lv~~l~~~-~~~~~l~~ 206 (307)
T 1ydo_A 160 IRLSEALFEFGIS--ELSLGDTIGAANPAQVETVLEALLAR-FPANQIAL 206 (307)
T ss_dssp HHHHHHHHHHTCS--CEEEECSSCCCCHHHHHHHHHHHHTT-SCGGGEEE
T ss_pred HHHHHHHHhcCCC--EEEEcCCCCCcCHHHHHHHHHHHHHh-CCCCeEEE
Confidence 6677778888887 46677665444445555566665432 3 355543
No 106
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=89.56 E-value=6.3 Score=41.33 Aligned_cols=87 Identities=15% Similarity=0.212 Sum_probs=62.6
Q ss_pred cCCCCceEEEeccCCC----CCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHHhhcCCCCccee-eccC-
Q 006566 98 IGSEHPIRVQTMTTND----TKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLV-ADIH- 169 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~----T~Dv~atv~Qi~rl~~aGceiVRvtvp~--~~~A~~l~~I~~~L~~~g~~iPLV-ADIH- 169 (640)
+||..+=+|.+-.+.. ..+.+..+++++++.+.|...+.+-+-. .++.+.++.|++.+ |-+++|. .|.|
T Consensus 120 LGg~~r~~v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~avR~a~---g~~~~l~~vDan~ 196 (391)
T 3gd6_A 120 LGGRVKEKIKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEF---GSRVRIKSYDFSH 196 (391)
T ss_dssp TTCCSCSEEEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHH---GGGCEEEEEECTT
T ss_pred hCCCcCCeEEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCCCHHHHHHHHHHHHHHc---CCCCcEEEecCCC
Confidence 4554443444333333 4578999999999999999999998743 56777888887753 5679999 9987
Q ss_pred -CCHHHHHHHhhhcCceee
Q 006566 170 -FAPSVALRVAECFDKIRV 187 (640)
Q Consensus 170 -F~~~~Al~Aa~~v~KVRI 187 (640)
|++.-|...++.+++..|
T Consensus 197 ~~~~~~A~~~~~~l~~~~i 215 (391)
T 3gd6_A 197 LLNWKDAHRAIKRLTKYDL 215 (391)
T ss_dssp CSCHHHHHHHHHHHTTCCS
T ss_pred CcCHHHHHHHHHHHHhcCC
Confidence 667777777777776544
No 107
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=89.50 E-value=0.96 Score=47.53 Aligned_cols=110 Identities=5% Similarity=0.048 Sum_probs=82.3
Q ss_pred ecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHH-HHhhcCCCCcceeeccCC-CHHH
Q 006566 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIK-NSLVQKNYNIPLVADIHF-APSV 174 (640)
Q Consensus 97 ~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~-~~L~~~g~~iPLVADIHF-~~~~ 174 (640)
.+|.+-||+|= .| ..-|.+.+++-+++|.+.|.+.+==-++ ..+.+.+++++ + .+++|+++|=.+ ++.-
T Consensus 191 a~g~d~~l~vD--an-~~~~~~~A~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~~iPIa~dE~i~~~~~ 261 (389)
T 3ozy_A 191 RVGADVEILVD--AN-QSLGRHDALAMLRILDEAGCYWFEEPLS-IDDIEGHRILRAQ-----GTPVRIATGENLYTRNA 261 (389)
T ss_dssp HHCTTSEEEEE--CT-TCCCHHHHHHHHHHHHHTTCSEEESCSC-TTCHHHHHHHHTT-----CCSSEEEECTTCCHHHH
T ss_pred HcCCCceEEEE--CC-CCcCHHHHHHHHHHHHhcCCCEEECCCC-cccHHHHHHHHhc-----CCCCCEEeCCCCCCHHH
Confidence 35778888874 12 2346788888889999999998854343 23566677777 5 588999999664 4666
Q ss_pred HHHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 175 ALRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 175 Al~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
+..+++. +|-|.|.|+..|.-.. ...+...|+++|+++=+|
T Consensus 262 ~~~~i~~~~~d~v~ik~~~~GGit~----------------------~~~ia~~A~~~gi~~~~h 304 (389)
T 3ozy_A 262 FNDYIRNDAIDVLQADASRAGGITE----------------------ALAISASAASAHLAWNPH 304 (389)
T ss_dssp HHHHHHTTCCSEECCCTTTSSCHHH----------------------HHHHHHHHHHTTCEECCC
T ss_pred HHHHHHcCCCCEEEeCccccCCHHH----------------------HHHHHHHHHHcCCEEEec
Confidence 7766654 9999999999988443 778999999999998665
No 108
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=89.38 E-value=1.1 Score=44.71 Aligned_cols=110 Identities=17% Similarity=0.183 Sum_probs=71.9
Q ss_pred CCceEEEeccCCCC---CCHHHHHHHHHHHHHcCCCEEEEec-----CCHHHHHHHHHHHHHhhcCCCCcceeeccCCCH
Q 006566 101 EHPIRVQTMTTNDT---KDVAGTVEEVMRIADQGADLVRITV-----QGKREADACFEIKNSLVQKNYNIPLVADIHFAP 172 (640)
Q Consensus 101 ~~PI~VQSMt~t~T---~Dv~atv~Qi~rl~~aGceiVRvtv-----p~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~ 172 (640)
..+|-||+.|-.+. .|.+. .+.+++++|.+-|=+.. +...+ .+++++.|.+.|..++.+ |+.+
T Consensus 12 ~~~~g~~~~s~~~~~~~~~~~~---~l~~~a~~G~~~VEl~~~~~~~~~~~~---~~~~~~~l~~~GL~v~~~---~~~~ 82 (303)
T 3l23_A 12 GKEIGLQIYSLSQELYKGDVAA---NLRKVKDMGYSKLELAGYGKGAIGGVP---MMDFKKMAEDAGLKIISS---HVNP 82 (303)
T ss_dssp CCCCEEEGGGGGGGGGSSCHHH---HHHHHHHTTCCEEEECCEETTEETTEE---HHHHHHHHHHTTCEEEEE---ECCC
T ss_pred CCceEEEEEEchhhhccCCHHH---HHHHHHHcCCCEEEeccccCcccCCCC---HHHHHHHHHHcCCeEEEE---eccc
Confidence 46789998887764 25554 45667788999998876 33333 466777777788776543 3221
Q ss_pred ---------------------H-------HHH-HHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHH
Q 006566 173 ---------------------S-------VAL-RVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSP 222 (640)
Q Consensus 173 ---------------------~-------~Al-~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~ 222 (640)
. -++ .|.+. +..|++. +. . . ..+ .+.+++..+.+.+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~-~~--~-~------~~~----~~~~~~~~~~l~~ 148 (303)
T 3l23_A 83 VDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQP-MM--P-T------ITT----HDEAKLVCDIFNQ 148 (303)
T ss_dssp BCTTCSSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEEEEC-SC--C-C------CCS----HHHHHHHHHHHHH
T ss_pred ccccccCcccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEEC-CC--C-C------CCC----HHHHHHHHHHHHH
Confidence 1 122 23334 8889884 31 1 1 012 2456788899999
Q ss_pred HHHHHHHcCCe
Q 006566 223 LVEKCKKYGRA 233 (640)
Q Consensus 223 lV~~~Ke~g~a 233 (640)
+.+.|+++|+.
T Consensus 149 l~~~a~~~Gv~ 159 (303)
T 3l23_A 149 ASDVIKAEGIA 159 (303)
T ss_dssp HHHHHHHTTCT
T ss_pred HHHHHHHCCCc
Confidence 99999999986
No 109
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=89.28 E-value=1.6 Score=45.37 Aligned_cols=112 Identities=16% Similarity=0.187 Sum_probs=84.0
Q ss_pred ecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHH
Q 006566 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVA 175 (640)
Q Consensus 97 ~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~A 175 (640)
.+|.+.+++|= .| ..-+.+.+++-+++|.+.|.+++==-++ ..+.+.+..++++ +++|+.+|=. +++.-+
T Consensus 180 ~~g~~~~l~vD--aN-~~~~~~~A~~~~~~l~~~~i~~iEqP~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 250 (368)
T 3q45_A 180 AAGDSITLRID--AN-QGWSVETAIETLTLLEPYNIQHCEEPVS-RNLYTALPKIRQA-----CRIPIMADESCCNSFDA 250 (368)
T ss_dssp HHCSSSEEEEE--CT-TCBCHHHHHHHHHHHGGGCCSCEECCBC-GGGGGGHHHHHHT-----CSSCEEESTTCCSHHHH
T ss_pred HhCCCCeEEEE--CC-CCCChHHHHHHHHHHhhcCCCEEECCCC-hhHHHHHHHHHhh-----CCCCEEEcCCcCCHHHH
Confidence 35777888884 22 2346788888888999999888753333 2356677788874 8899999954 567777
Q ss_pred HHHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 176 l~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
..+++ .++-|.|.|+..|.-.. ...+...|+++|+++=+|.+
T Consensus 251 ~~~~~~~~~d~v~~k~~~~GGit~----------------------~~~i~~~A~~~gi~~~~~~~ 294 (368)
T 3q45_A 251 ERLIQIQACDSFNLKLSKSAGITN----------------------ALNIIRLAEQAHMPVQVGGF 294 (368)
T ss_dssp HHHHHTTCCSEEEECTTTTTSHHH----------------------HHHHHHHHHHTTCCEEECCS
T ss_pred HHHHHcCCCCeEEechhhcCCHHH----------------------HHHHHHHHHHcCCcEEecCc
Confidence 77775 49999999999988443 67899999999999977643
No 110
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=89.07 E-value=1.5 Score=46.71 Aligned_cols=110 Identities=8% Similarity=0.019 Sum_probs=83.2
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+.||+|= .| .--+.+.+++-+++|.+.|.+++==-+|. .+.+.+++|+++ +++|+++|=.+ ++.-+.
T Consensus 223 vG~d~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEqP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 293 (424)
T 3v3w_A 223 FGPDIHLLHD--VH-HRLTPIEAARLGKALEPYHLFWMEDAVPA-ENQESFKLIRQH-----TTTPLAVGEVFNSIHDCR 293 (424)
T ss_dssp HCSSSEEEEE--CT-TCCCHHHHHHHHHHHGGGCCSEEECCSCC-SSTTHHHHHHHH-----CCSCEEECTTCCSGGGTH
T ss_pred cCCCCcEEEe--CC-CCCCHHHHHHHHHHHHhcCCCEEECCCCh-HhHHHHHHHHhh-----CCCCEEEccCcCCHHHHH
Confidence 5778888883 22 23578888888899999999988644442 355678888885 78999999554 577777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.+++. ++-|.|.|+..|.-.. ...+...|+++|+++=++.
T Consensus 294 ~~i~~ga~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~~~h~ 335 (424)
T 3v3w_A 294 ELIQNQWIDYIRTTIVHAGGISQ----------------------MRRIADFASLFHVRTGFHG 335 (424)
T ss_dssp HHHHTTCCSEECCCTTTTTHHHH----------------------HHHHHHHHHTTTCEEEECC
T ss_pred HHHHcCCCCeEeecchhcCCHHH----------------------HHHHHHHHHHcCCEEEecC
Confidence 66654 9999999999987442 6789999999999985544
No 111
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=88.82 E-value=1.3 Score=47.17 Aligned_cols=109 Identities=9% Similarity=0.059 Sum_probs=81.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCC-cceeeccCC-CHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYN-IPLVADIHF-APSVA 175 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~-iPLVADIHF-~~~~A 175 (640)
+|.+-+|+|=- | ..-|.+.+++-+++|.+.|.+++==-+| ..+.+.+++|+++ ++ +|+++|=.+ ++.-+
T Consensus 226 vG~d~~l~vDa--n-~~~~~~eai~~~~~L~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~~iPIa~dE~~~~~~~~ 296 (428)
T 3bjs_A 226 LGDEVDILTDA--N-TAYTMADARRVLPVLAEIQAGWLEEPFA-CNDFASYREVAKI-----TPLVPIAAGENHYTRFEF 296 (428)
T ss_dssp HCTTSEEEEEC--T-TCCCHHHHHHHHHHHHHTTCSCEECCSC-TTCHHHHHHHTTT-----CSSSCEEECTTCCSHHHH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhcCCCEEECCCC-ccCHHHHHHHHHh-----CCCCcEEcCCCcCCHHHH
Confidence 57778887732 2 3357788888888999999887643232 2456777777763 67 999999665 57878
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
..+++. ++-|.|.|...|.-.. ...+++.|+++|+++=+|
T Consensus 297 ~~~i~~~~~d~v~ik~~~~GGite----------------------a~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 297 GQMLDAGAVQVWQPDLSKCGGITE----------------------GIRIAAMASAYRIPINAH 338 (428)
T ss_dssp HHHHTTCCEEEECCBTTTSSCHHH----------------------HHHHHHHHHHTTCCBCCB
T ss_pred HHHHHhCCCCEEEeCccccCCHHH----------------------HHHHHHHHHHcCCeEEec
Confidence 777754 9999999999988442 678999999999997666
No 112
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=88.72 E-value=1.2 Score=46.71 Aligned_cols=107 Identities=7% Similarity=0.099 Sum_probs=81.9
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-||+|= .| ..-+.+.+++-+++|.+.|.+++==-++ ..+.+.++.|+++ +++|+++|=.+ ++.-+.
T Consensus 204 vg~d~~l~vD--an-~~~~~~~a~~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 274 (393)
T 2og9_A 204 LGDAVPLMVD--AN-QQWDRPTAQRMCRIFEPFNLVWIEEPLD-AYDHEGHAALALQ-----FDTPIATGEMLTSAAEHG 274 (393)
T ss_dssp HCTTSCEEEE--CT-TCCCHHHHHHHHHHHGGGCCSCEECCSC-TTCHHHHHHHHHH-----CSSCEEECTTCCSHHHHH
T ss_pred cCCCCEEEEE--CC-CCCCHHHHHHHHHHHHhhCCCEEECCCC-cccHHHHHHHHHh-----CCCCEEeCCCcCCHHHHH
Confidence 5778888883 12 3357888899999999999988642232 2467788888885 78999999654 688888
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEE
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIR 235 (640)
.+++. +|-|.|.|...|.-.. ...+++.|+++|+++=
T Consensus 275 ~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~gi~~~ 313 (393)
T 2og9_A 275 DLIRHRAADYLMPDAPRVGGITP----------------------FLKIASLAEHAGLMLA 313 (393)
T ss_dssp HHHHTTCCSEECCCHHHHTSHHH----------------------HHHHHHHHHHTTCEEC
T ss_pred HHHHCCCCCEEeeCccccCCHHH----------------------HHHHHHHHHHcCCEEe
Confidence 87765 9999999998887432 6789999999999873
No 113
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=88.59 E-value=1.4 Score=45.50 Aligned_cols=110 Identities=18% Similarity=0.222 Sum_probs=81.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-+|+|=- | .--|.+.+++-+++|.+.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+ ++.-+.
T Consensus 185 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~~~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 255 (370)
T 1nu5_A 185 VGDRASVRVDV--N-QGWDEQTASIWIPRLEEAGVELVEQPVP-RANFGALRRLTEQ-----NGVAILADESLSSLSSAF 255 (370)
T ss_dssp HGGGCEEEEEC--T-TCCCHHHHHHHHHHHHHHTCCEEECCSC-TTCHHHHHHHHHH-----CSSEEEESTTCCSHHHHH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhcCcceEeCCCC-cccHHHHHHHHHh-----CCCCEEeCCCCCCHHHHH
Confidence 45566776642 2 2346788888888899999888642222 2567788888885 68999999654 678888
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.+++. ++-|.|.|...|.-.. ...+...|+++|+++=+|.
T Consensus 256 ~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~g~~~~~~~ 297 (370)
T 1nu5_A 256 ELARDHAVDAFSLKLCNMGGIAN----------------------TLKVAAVAEAAGISSYGGT 297 (370)
T ss_dssp HHHHTTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHHTCEEEECC
T ss_pred HHHHhCCCCEEEEchhhcCCHHH----------------------HHHHHHHHHHcCCcEEecC
Confidence 77766 9999999999987443 6789999999999986553
No 114
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=88.55 E-value=0.86 Score=43.71 Aligned_cols=140 Identities=12% Similarity=0.055 Sum_probs=84.9
Q ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccCC----CHH-H
Q 006566 103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHF----APS-V 174 (640)
Q Consensus 103 PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIHF----~~~-~ 174 (640)
++.+||.+-.+ .|.+.+ +..+.++|.+-|=+.... .-..+.++++++.|.+.|..+..+.-.-+ ..+ .
T Consensus 19 klg~~~~~~~~-~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~ 94 (257)
T 3lmz_A 19 HLGMAGYTFVN-FDLDTT---LKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRA 94 (257)
T ss_dssp EEEECGGGGTT-SCHHHH---HHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHH
T ss_pred EEEEEEEeecC-CCHHHH---HHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHH
Confidence 45677776655 366544 556678899999888642 22456678888888888887665432110 012 2
Q ss_pred HHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee-CCCCCcHhHHHHhC
Q 006566 175 ALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYG 252 (640)
Q Consensus 175 Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv-NhGSLs~ril~ryG 252 (640)
...|.+. +..|++.|| . +.+.++.+.|+++|+.+ ++ ||+- + +
T Consensus 95 i~~A~~lGa~~v~~~p~-----~---------------------~~l~~l~~~a~~~gv~l--~lEn~~~-~-------~ 138 (257)
T 3lmz_A 95 FDYAKRVGVKLIVGVPN-----Y---------------------ELLPYVDKKVKEYDFHY--AIHLHGP-D-------I 138 (257)
T ss_dssp HHHHHHHTCSEEEEEEC-----G---------------------GGHHHHHHHHHHHTCEE--EEECCCT-T-------C
T ss_pred HHHHHHhCCCEEEecCC-----H---------------------HHHHHHHHHHHHcCCEE--EEecCCC-c-------c
Confidence 2334444 899999887 1 24778999999999865 54 4430 0 0
Q ss_pred CChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChh
Q 006566 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPV 287 (640)
Q Consensus 253 dtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~ 287 (640)
.++.+.-+..++++..+ .++-+-+=..|..
T Consensus 139 ----~~~~~~~~~~~ll~~~~-p~vg~~~D~~h~~ 168 (257)
T 3lmz_A 139 ----KTYPDATDVWVHTKDLD-PRIGMCLDVGHDL 168 (257)
T ss_dssp ----SSSCSHHHHHHHHTTSC-TTEEEEEEHHHHH
T ss_pred ----cccCCHHHHHHHHHhCC-CCccEEEchhhHH
Confidence 02233445566666433 6777776655533
No 115
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=88.53 E-value=0.99 Score=47.28 Aligned_cols=109 Identities=15% Similarity=0.131 Sum_probs=78.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-+|+|=- | ..-+.+.+++-+++|.+.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+ ++.-+.
T Consensus 212 ~G~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 282 (407)
T 2o56_A 212 VGPDVDIIAEM--H-AFTDTTSAIQFGRMIEELGIFYYEEPVM-PLNPAQMKQVADK-----VNIPLAAGERIYWRWGYR 282 (407)
T ss_dssp HCTTSEEEEEC--T-TCSCHHHHHHHHHHHGGGCCSCEECSSC-SSSHHHHHHHHHH-----CCSCEEECTTCCHHHHHH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhcCCCEEeCCCC-hhhHHHHHHHHHh-----CCCCEEeCCCcCCHHHHH
Confidence 45566666631 1 2346777788888888888877542222 2457778888875 68999999766 577777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.+++. ++-|.|.|...|.-.. ...++..|+++|+++=+|
T Consensus 283 ~~i~~~~~d~v~ik~~~~GGite----------------------~~~i~~~A~~~g~~~~~h 323 (407)
T 2o56_A 283 PFLENGSLSVIQPDICTCGGITE----------------------VKKICDMAHVYDKTVQIH 323 (407)
T ss_dssp HHHHTTCCSEECCCTTTTTHHHH----------------------HHHHHHHHHTTTCEECCC
T ss_pred HHHHcCCCCEEecCccccCCHHH----------------------HHHHHHHHHHcCCeEeec
Confidence 77754 9999999999988442 678999999999987443
No 116
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=88.52 E-value=1.6 Score=45.74 Aligned_cols=110 Identities=8% Similarity=0.085 Sum_probs=82.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-||+|=- | ..-|.+.+++-+++|.+.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+ ++.-+.
T Consensus 186 ~g~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 256 (397)
T 2qde_A 186 VGDDVDLFIDI--N-GAWTYDQALTTIRALEKYNLSKIEQPLP-AWDLDGMARLRGK-----VATPIYADESAQELHDLL 256 (397)
T ss_dssp HCTTSCEEEEC--T-TCCCHHHHHHHHHHHGGGCCSCEECCSC-TTCHHHHHHHHTT-----CSSCEEESTTCCSHHHHH
T ss_pred hCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhCCCCEEECCCC-hhhHHHHHHHHhh-----CCCCEEEeCCcCCHHHHH
Confidence 57788887642 2 2346788888888999999888643232 2456777777774 78999999665 577777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.+++. ++-|.|.|...|.-.. ...++..|+++|+++=+|.
T Consensus 257 ~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~g~~~~~~~ 298 (397)
T 2qde_A 257 AIINKGAADGLMIKTQKAGGLLK----------------------AQRWLTLARLANLPVICGC 298 (397)
T ss_dssp HHHHHTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHHTCCEEECC
T ss_pred HHHHcCCCCEEEEeccccCCHHH----------------------HHHHHHHHHHcCCeEEEec
Confidence 77754 9999999999987442 6779999999999987774
No 117
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=88.41 E-value=1 Score=47.00 Aligned_cols=109 Identities=9% Similarity=0.153 Sum_probs=81.1
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHc-CCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQ-GADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~a-GceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~A 175 (640)
+|.+-||+|=- | ..-+.+.+++-+++|.+. |.+++==-+| ..+.+.+++++++ +++|+++|=.+ ++.-+
T Consensus 181 ~G~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 251 (382)
T 2gdq_A 181 AGSSITMILDA--N-QSYDAAAAFKWERYFSEWTNIGWLEEPLP-FDQPQDYAMLRSR-----LSVPVAGGENMKGPAQY 251 (382)
T ss_dssp HCTTSEEEEEC--T-TCCCHHHHHTTHHHHTTCSCEEEEECCSC-SSCHHHHHHHHTT-----CSSCEEECTTCCSHHHH
T ss_pred hCCCCEEEEEC--C-CCCCHHHHHHHHHHHhhccCCeEEECCCC-cccHHHHHHHHhh-----CCCCEEecCCcCCHHHH
Confidence 57778888721 2 234678888888889888 8776542233 2456777788774 78999999664 57777
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
..+++. ++-|.|.|...|.-.+ ...+...|+++|+++=+|
T Consensus 252 ~~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 252 VPLLSQRCLDIIQPDVMHVNGIDE----------------------FRDCLQLARYFGVRASAH 293 (382)
T ss_dssp HHHHHTTCCSEECCCTTTTTHHHH----------------------HHHHHHHHHHHTCEECCC
T ss_pred HHHHHcCCCCEEecCccccCCHHH----------------------HHHHHHHHHHcCCEEeec
Confidence 777754 9999999999987442 678999999999998777
No 118
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=88.37 E-value=1.9 Score=44.40 Aligned_cols=110 Identities=14% Similarity=0.246 Sum_probs=79.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-+++|= . | ..-+.+. ++-+++|.+.|.+++==-+| ..+.+.++.++++ +++|+++|=.+ ++.-+.
T Consensus 180 ~g~~~~l~vD-a-n-~~~~~~~-~~~~~~l~~~~i~~iE~P~~-~~~~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 249 (368)
T 1sjd_A 180 FGDDVLLQVD-A-N-TAYTLGD-APQLARLDPFGLLLIEQPLE-EEDVLGHAELARR-----IQTPICLDESIVSARAAA 249 (368)
T ss_dssp HCTTSEEEEE-C-T-TCCCGGG-HHHHHTTGGGCCSEEECCSC-TTCHHHHHHHHTT-----CSSCEEESTTCCSHHHHH
T ss_pred cCCCceEEEe-c-c-CCCCHHH-HHHHHHHHhcCCCeEeCCCC-hhhHHHHHHHHHh-----CCCCEEECCCcCCHHHHH
Confidence 5777788772 1 1 2234566 77788888899888642222 2456777788774 78999999654 677777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
.+++. ++-|.|.|...|.-.. ...+++.|+++|+++=+|-+
T Consensus 250 ~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~g~~~~~~~~ 292 (368)
T 1sjd_A 250 DAIKLGAVQIVNIKPGRVGGYLE----------------------ARRVHDVCAAHGIPVWCGGM 292 (368)
T ss_dssp HHHHTTCCSEEEECTTTTTSHHH----------------------HHHHHHHHHHTTCCEEECCC
T ss_pred HHHHcCCCCEEEecccccCCHHH----------------------HHHHHHHHHHcCCcEEeCCc
Confidence 77754 9999999999988442 67899999999999645543
No 119
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=88.27 E-value=2.4 Score=43.96 Aligned_cols=168 Identities=17% Similarity=0.188 Sum_probs=97.4
Q ss_pred EceeecC--CCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEe----cCCHHH----HHHHHHHHHHhhcCCCCc
Q 006566 93 VGNVAIG--SEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT----VQGKRE----ADACFEIKNSLVQKNYNI 162 (640)
Q Consensus 93 VG~v~IG--G~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvt----vp~~~~----A~~l~~I~~~L~~~g~~i 162 (640)
++..++| |..|...-+ .+..|.+..++. ++++|++-|=+. .|.... .+.++++++.|.+.|..+
T Consensus 12 ~~~w~~~~~~~~~f~~~~---~p~~~~~e~l~~---aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i 85 (387)
T 1bxb_A 12 FGLWTVGNVGRDPFGDAV---RERLDPVYVVHK---LAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKV 85 (387)
T ss_dssp EEHHHHTCCCCBTTBCCC---SCCCCHHHHHHH---HHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBC
T ss_pred eeeccccCCCCCCCCCCC---CCCCCHHHHHHH---HHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEE
Confidence 4444555 334443222 234577665555 556699999998 664321 467788888899999887
Q ss_pred ceee----------c---cCCCHH----------HHH-HHhhh-cCceeeCCCCCCchhhhccccccc-hHHHHHHHhhh
Q 006566 163 PLVA----------D---IHFAPS----------VAL-RVAEC-FDKIRVNPGNFADRRAQFEQLEYT-DDEYQKELQHI 216 (640)
Q Consensus 163 PLVA----------D---IHF~~~----------~Al-~Aa~~-v~KVRINPGN~~d~~k~F~~~eYt-deeY~~Ele~I 216 (640)
+-+. + .|-++. -++ .|.+. +..|.+.||.-+. .|. ...+.+.++++
T Consensus 86 ~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~--------~~~~~~~~~~~~~~~ 157 (387)
T 1bxb_A 86 PMVTANLFSDPAFKDGAFTSPDPWVRAYALRKSLETMDLGAELGAEIYVVWPGREGA--------EVEATGKARKVWDWV 157 (387)
T ss_dssp CEEECCCSSSGGGGGCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEE--------SCGGGCGGGTHHHHH
T ss_pred EEEecCCCCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCc--------cCCccCCHHHHHHHH
Confidence 7443 1 122331 112 23334 8889999985321 011 12345678899
Q ss_pred HhhHHHHHHHHHHcCCeEEEee-CCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCc-EEEEEEe
Q 006566 217 EEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHN-FLFSMKA 283 (640)
Q Consensus 217 ~~~f~~lV~~~Ke~g~aIRIGv-NhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~d-iviSmKs 283 (640)
.+.+.++.+.|+++|--|||++ ||..-+.. ..|..| .-+.++++++.|-.+ +-+-+=.
T Consensus 158 ~e~L~~l~~~a~~~g~gv~l~lE~~~~~~~~--~~~~~t-------~~~~~~ll~~v~~~~~vgl~lD~ 217 (387)
T 1bxb_A 158 REALNFMAAYAEDQGYGYRFALEPKPNEPRG--DIYFAT-------VGSMLAFIHTLDRPERFGLNPEF 217 (387)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCSSSSSS--EESSCS-------HHHHHHHHTTSSSGGGEEECCBH
T ss_pred HHHHHHHHHHHHHhCCCcEEEEecCCCCCCC--CccCCC-------HHHHHHHHHHcCCccceEEEEec
Confidence 9999999999999844457787 33211100 011223 334456677777766 6665433
No 120
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=88.18 E-value=7.4 Score=39.96 Aligned_cols=144 Identities=8% Similarity=0.035 Sum_probs=87.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec----CCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCC
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITV----QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtv----p~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINP 189 (640)
..+.+..+++++++.+.|+.-|-++. |.....+.+.++-+.+++.|. +|-+||
T Consensus 98 ~~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~-----------------------~i~~t~ 154 (369)
T 1r30_A 98 LMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGL-----------------------EACMTL 154 (369)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTS-----------------------EEEEEC
T ss_pred cCCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCC-----------------------eEEEec
Confidence 46788888999999999999888865 555566666666666655432 133688
Q ss_pred CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHH
Q 006566 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARIC 269 (640)
Q Consensus 190 GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~ 269 (640)
|-+ +.+ .++..|+.|+- ||.++-.| +++++.+.+.+ .-.+..++.++.+
T Consensus 155 G~l-~~e--------------------------~l~~L~~aGvd-~v~i~les-~~e~~~~i~~~--~~~~~~l~~i~~a 203 (369)
T 1r30_A 155 GTL-SES--------------------------QAQRLANAGLD-YYNHNLDT-SPEFYGNIITT--RTYQERLDTLEKV 203 (369)
T ss_dssp SSC-CHH--------------------------HHHHHHHHCCC-EEECCCBS-CHHHHHHHCCS--SCHHHHHHHHHHH
T ss_pred CCC-CHH--------------------------HHHHHHHCCCC-EEeecCcC-CHHHHHHhCCC--CCHHHHHHHHHHH
Confidence 865 212 23445566742 67777788 89999988742 2246677777788
Q ss_pred HHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEEEee
Q 006566 270 RKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVT 314 (640)
Q Consensus 270 e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLGVT 314 (640)
.+.|| ++.+.+=.-- ..+.+....+++.+.+.+ .+|-|+++.
T Consensus 204 ~~~Gi-~v~~~~I~Gl-~et~ed~~~~l~~l~~l~-~~~~~i~~~ 245 (369)
T 1r30_A 204 RDAGI-KVCSGGIVGL-GETVKDRAGLLLQLANLP-TPPESVPIN 245 (369)
T ss_dssp HHHHC-EEECCEEECS-SCCHHHHHHHHHHHHSSS-SCCSEEEEE
T ss_pred HHcCC-eeeeeeEeeC-CCCHHHHHHHHHHHHhhc-CCCCEEEee
Confidence 88888 3322211100 123444444555554444 245555553
No 121
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=88.05 E-value=0.94 Score=48.56 Aligned_cols=109 Identities=11% Similarity=0.084 Sum_probs=81.2
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-+|+|= .| .--+.+.+++-+++|.+.|.+.+==-+| .++.+.++.|+++ +++|+++|=.+ ++.-+.
T Consensus 200 vG~d~~L~vD--an-~~~t~~~A~~~~~~Le~~~i~~iEeP~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 270 (433)
T 3rcy_A 200 VGDKADLLFG--TH-GQFTTAGAIRLGQAIEPYSPLWYEEPVP-PDNVGAMAQVARA-----VRIPVATGERLTTKAEFA 270 (433)
T ss_dssp HTTSSEEEEC--CC-SCBCHHHHHHHHHHHGGGCCSEEECCSC-TTCHHHHHHHHHH-----SSSCEEECTTCCSHHHHH
T ss_pred hCCCCeEEEe--CC-CCCCHHHHHHHHHHhhhcCCCEEECCCC-hhhHHHHHHHHhc-----cCCCEEecCCCCCHHHHH
Confidence 4666677762 11 2346777888888999999888864444 2357778888885 88999999654 577777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.+++. +|-|++.|+..|.-.. ...+...|+.+|+++=++
T Consensus 271 ~~l~~g~~D~v~~d~~~~GGit~----------------------~~kia~lA~~~gv~~~~h 311 (433)
T 3rcy_A 271 PVLREGAAAILQPALGRAGGIWE----------------------MKKVAAMAEVYNAQMAPH 311 (433)
T ss_dssp HHHHTTCCSEECCCHHHHTHHHH----------------------HHHHHHHHHTTTCEECCC
T ss_pred HHHHcCCCCEEEeCchhcCCHHH----------------------HHHHHHHHHHcCCEEEec
Confidence 77754 9999999999987442 678999999999988544
No 122
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=87.95 E-value=3.1 Score=39.56 Aligned_cols=131 Identities=15% Similarity=0.211 Sum_probs=80.8
Q ss_pred HHHHHHHHcCCCEEEEecCCH--HHHHHHHHHHHHhhcCCCCcceee---ccCC---CHH-----------HHHHHhhh-
Q 006566 122 EEVMRIADQGADLVRITVQGK--READACFEIKNSLVQKNYNIPLVA---DIHF---APS-----------VALRVAEC- 181 (640)
Q Consensus 122 ~Qi~rl~~aGceiVRvtvp~~--~~A~~l~~I~~~L~~~g~~iPLVA---DIHF---~~~-----------~Al~Aa~~- 181 (640)
+.+..++++|.+ |=+..... .....++++++.+. | .+.+.+ |+.+ +|. ....|.+.
T Consensus 14 ~~l~~~~~~G~~-vEl~~~~~~~~~~~~~~~~~~~~~--~-~~~~h~~~~~~~l~~~~~~~r~~~~~~~~~~i~~A~~lG 89 (254)
T 3ayv_A 14 EALPRLQALGLG-AEVYLDPALLEEDALFQSLRRRFS--G-KLSVHLPFWNLDLLSPDPEVRGLTLRRLLFGLDRAAELG 89 (254)
T ss_dssp HHHHHHHHHTCE-EEEECCGGGTTCHHHHHHHHHHCC--S-CEEEECCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCC-EEEeccccccCcHHHHHHHHHHhC--C-CeEEecCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 345556678999 87754432 22226777887765 4 333332 2222 231 12234444
Q ss_pred cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee-CCCCCcHhHHHHhCCChHHHHH
Q 006566 182 FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVE 260 (640)
Q Consensus 182 v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv-NhGSLs~ril~ryGdtp~gMVe 260 (640)
+..|++.||...... ...+++.++++.+.+.++.+.|+++|+.+ ++ ||+. .|+
T Consensus 90 a~~v~~~~g~~~~~~---------~~~~~~~~~~~~~~l~~l~~~a~~~gv~l--~lEn~~~----------~~~----- 143 (254)
T 3ayv_A 90 ADRAVFHSGIPHGRT---------PEEALERALPLAEALGLVVRRARTLGVRL--LLENSHE----------PHP----- 143 (254)
T ss_dssp CSEEEEECCCCTTCC---------HHHHHHTHHHHHHHTHHHHHHHHHHTCEE--EEECSSC----------SSG-----
T ss_pred CCEEEECCCCCcccc---------cccHHHHHHHHHHHHHHHHHHHhhcCCEE--EEcCCCC----------CCH-----
Confidence 888999999765321 12355667889999999999999999754 65 5542 144
Q ss_pred HHHHHHHHHHHCCCCcEEEEEEeCC
Q 006566 261 SAFEFARICRKLDFHNFLFSMKASN 285 (640)
Q Consensus 261 SAle~~~i~e~~~F~diviSmKsSn 285 (640)
-+..+++++.| .++-+-+=..+
T Consensus 144 --~~~~~l~~~v~-~~vg~~~D~~H 165 (254)
T 3ayv_A 144 --EALRPVLEAHA-GELGFCFDAAH 165 (254)
T ss_dssp --GGTHHHHHHHT-TSSEEEEEHHH
T ss_pred --HHHHHHHHhcC-cCEEEEEEchh
Confidence 34567888888 88887765444
No 123
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=87.82 E-value=0.81 Score=48.60 Aligned_cols=110 Identities=10% Similarity=0.100 Sum_probs=80.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+.||+|= .| .--+.+.+++-+++|.+.|.+.+==-+|. .+.+.+..|++ .+++|+++|=. +++.-+.
T Consensus 175 vG~d~~L~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEeP~~~-~d~~~~~~l~~-----~~~iPIa~dE~i~~~~~~~ 245 (405)
T 3rr1_A 175 FGNTVEFGLD--FH-GRVSAPMAKVLIKELEPYRPLFIEEPVLA-EQAETYARLAA-----HTHLPIAAGERMFSRFDFK 245 (405)
T ss_dssp TGGGSEEEEE--CC-SCBCHHHHHHHHHHHGGGCCSCEECSSCC-SSTHHHHHHHT-----TCSSCEEECTTCCSHHHHH
T ss_pred hCCCceEEEE--CC-CCCCHHHHHHHHHHHHhcCCCEEECCCCc-ccHHHHHHHHh-----cCCCCEEecCCcCCHHHHH
Confidence 4666677763 12 23467778888888999998877543432 34566777776 48899999954 4677777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.+++. ++-|.|.|+..|.-.. ...+...|+++|+++=+|.
T Consensus 246 ~~l~~~a~d~v~~d~~~~GGite----------------------a~kia~lA~~~gi~v~~h~ 287 (405)
T 3rr1_A 246 RVLEAGGVSILQPDLSHAGGITE----------------------CVKIAAMAEAYDVALAPHC 287 (405)
T ss_dssp HHHHHCCCSEECCBTTTTTHHHH----------------------HHHHHHHHHTTTCEECCBC
T ss_pred HHHHHhCCCeEEEChhhcCCHHH----------------------HHHHHHHHHHcCCEEEeCC
Confidence 77754 9999999999987442 6789999999999986663
No 124
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=87.78 E-value=1.1 Score=46.25 Aligned_cols=110 Identities=15% Similarity=0.252 Sum_probs=80.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHH-HHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTV-EEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv-~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~A 175 (640)
+|.+-||+|=- | ..-|.+.++ +-+++|.+.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+ ++.-+
T Consensus 182 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPI~~dE~~~~~~~~ 252 (369)
T 2p8b_A 182 VGNDIAIRVDV--N-QGWKNSANTLTALRSLGHLNIDWIEQPVI-ADDIDAMAHIRSK-----TDLPLMIDEGLKSSREM 252 (369)
T ss_dssp HCTTSEEEEEC--T-TTTBSHHHHHHHHHTSTTSCCSCEECCBC-TTCHHHHHHHHHT-----CCSCEEESTTCCSHHHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHHHhCCCcEEECCCC-cccHHHHHHHHHh-----CCCCEEeCCCCCCHHHH
Confidence 57777887642 2 223556777 7788888888887632222 2456778888874 78999999664 68888
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
..+++. ++-|.|.|+..|.-.. +..+.+.|+++|+++=+|.
T Consensus 253 ~~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~g~~~~~~~ 295 (369)
T 2p8b_A 253 RQIIKLEAADKVNIKLMKCGGIYP----------------------AVKLAHQAEMAGIECQVGS 295 (369)
T ss_dssp HHHHHHTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHTTCEEEECC
T ss_pred HHHHHhCCCCEEEeecchhCCHHH----------------------HHHHHHHHHHcCCcEEecC
Confidence 877774 9999999999887443 7789999999999985553
No 125
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=87.46 E-value=1.6 Score=44.34 Aligned_cols=53 Identities=19% Similarity=0.345 Sum_probs=41.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec--CCHHHHHHHHHHHHHhhcCCCCcceee
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITV--QGKREADACFEIKNSLVQKNYNIPLVA 166 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtv--p~~~~A~~l~~I~~~L~~~g~~iPLVA 166 (640)
|-+.+..++...++.+.|||||+|++ .+.+|.-.|-+...++++...+.|+||
T Consensus 172 tP~~~el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa 226 (276)
T 3o1n_A 172 TPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIIT 226 (276)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCCSCCEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEEecCCChHHHHHHHHHHHHHHhcCCCCCEEE
Confidence 44578889999999999999999986 556677777777776665556688876
No 126
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=87.37 E-value=3.1 Score=41.50 Aligned_cols=110 Identities=16% Similarity=0.265 Sum_probs=84.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFA 193 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~~ 193 (640)
.|.+..++-+++|.+.|...|+||..+....+.++.|++++. .+-+-|..=+++.-|..|+++ ++=| +-||-
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~----~~~iGaGTVlt~~~a~~Ai~AGA~fI-vsP~~-- 115 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQP----EMLIGAGTILNGEQALAAKEAGATFV-VSPGF-- 115 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT----TCEEEEECCCSHHHHHHHHHHTCSEE-ECSSC--
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCC----CCEEeECCcCCHHHHHHHHHcCCCEE-EeCCC--
Confidence 677889999999999999999999999999999999999741 233445666889999999998 6655 56761
Q ss_pred chhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCC
Q 006566 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD 273 (640)
Q Consensus 194 d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~ 273 (640)
+ .++++.|+++|+++=.|+ .||.. +.-+.+.|
T Consensus 116 ~--------------------------~~vi~~~~~~gi~~ipGv--------------~TptE--------i~~A~~~G 147 (232)
T 4e38_A 116 N--------------------------PNTVRACQEIGIDIVPGV--------------NNPST--------VEAALEMG 147 (232)
T ss_dssp C--------------------------HHHHHHHHHHTCEEECEE--------------CSHHH--------HHHHHHTT
T ss_pred C--------------------------HHHHHHHHHcCCCEEcCC--------------CCHHH--------HHHHHHcC
Confidence 1 358899999999986676 25533 33346789
Q ss_pred CCcEEE
Q 006566 274 FHNFLF 279 (640)
Q Consensus 274 F~divi 279 (640)
++-+.+
T Consensus 148 ad~vK~ 153 (232)
T 4e38_A 148 LTTLKF 153 (232)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 887766
No 127
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=87.37 E-value=3.9 Score=42.53 Aligned_cols=229 Identities=15% Similarity=0.226 Sum_probs=138.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHHhhcCCCCccee----eccCCCHHHHHHHhh-h-c
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYNIPLV----ADIHFAPSVALRVAE-C-F 182 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~------~A~~l~~I~~~L~~~g~~iPLV----ADIHF~~~~Al~Aa~-~-v 182 (640)
--.+..+++..+|++||+-+|=+-+-+.+ +.+.+.++.+.+|++ +++.+. +.+.+++.-=+..++ . -
T Consensus 29 vTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~-~d~iI~~TTgg~~~~~~eerla~~~~~~P 107 (311)
T 3e02_A 29 ITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKER-TDAILNITTGGGLGMSLDERLAPARAARP 107 (311)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHH-CCCEEEECSSCSTTCCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHh-CCcEEEECCCCCCCCCHHHHHHHHHhcCC
Confidence 34589999999999999999999988743 555666666665553 665443 667788754333332 2 4
Q ss_pred CceeeCCCCC--C--chhhhccccccc-hHHHHHHH-hhh----HhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhC
Q 006566 183 DKIRVNPGNF--A--DRRAQFEQLEYT-DDEYQKEL-QHI----EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252 (640)
Q Consensus 183 ~KVRINPGN~--~--d~~k~F~~~eYt-deeY~~El-e~I----~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryG 252 (640)
|-.=+|.|-+ + ...++|+...++ +..|.+.- +.+ .+.+..+.+.|+|+|+..=|.+ |
T Consensus 108 e~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~~~i~~~~~~~~e~Gi~pE~e~------------f- 174 (311)
T 3e02_A 108 EVASMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGTRFEFEC------------Y- 174 (311)
T ss_dssp SEEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTCEEEEEE------------C-
T ss_pred CeeeecCCCceeccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeEEEEE------------E-
Confidence 4556888854 3 112234444443 23344432 222 2357789999999999998888 2
Q ss_pred CChHHHHHHHHHHHHH--HHHCCCCcEEEEEEe---CChhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehH
Q 006566 253 DSPRGMVESAFEFARI--CRKLDFHNFLFSMKA---SNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSA 327 (640)
Q Consensus 253 dtp~gMVeSAle~~~i--~e~~~F~diviSmKs---Sn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSA 327 (640)
+ .|++..+..+++- +..--|-++|+-++. +++..+ ..+...+.++--. ..+..|+=.|..+--....|
T Consensus 175 -d-~g~l~~~~~l~~~Gl~~~p~~~~~vlGv~~g~~~~~~~L-~~~~~~~~~~~~~----~~~wsv~~~Gr~~~p~~~~A 247 (311)
T 3e02_A 175 -D-VGHLYNLAHFVDRKLVEPPFFLQCVFGILGGIGADPENL-LHMRTIADRLFGQ----DYYLSVLAAGRHQMPFVTMS 247 (311)
T ss_dssp -S-HHHHHHHHHHHHTTSSCSCEEEEEEECCBTSCCSCHHHH-HHHHHHHHHHHTT----SEEEEEEECGGGHHHHHHHH
T ss_pred -c-HHHHHHHHHHHHcCCCCCCeEEEEEecCCCCCCCCHHHH-HHHHHHHHhhCCC----CCceEEEeeChhhHHHHHHH
Confidence 2 3677766655441 222223467776664 555433 3333333333211 24677777776666667777
Q ss_pred HHHHHHhhhcCCcEEEeecCC---CCchhhHHHHHHHh-hc
Q 006566 328 IGIGTLLQDGLGDTIRVSLTE---PPEKEIDPCRRLAN-LG 364 (640)
Q Consensus 328 iGIG~LL~DGIGDTIRVSLTe---dP~~Ei~va~~ILq-~~ 364 (640)
+.+|.-.-=|+.|+++.+--+ +-.+-|.-+.+|++ ++
T Consensus 248 ~~~GGhvRVGlEDnl~~~~G~lA~sNaelV~~~~~i~~~lg 288 (311)
T 3e02_A 248 AILGGNVRVGLEDSLYSGKGQLATSNAEQVRKIRRIIEELS 288 (311)
T ss_dssp HHTTCEEEESTTTCSEEETTEECSCHHHHHHHHHHHHHHTT
T ss_pred HHcCCCeEEccCcceecCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 888877788888888876321 22233566666766 53
No 128
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=87.35 E-value=9.4 Score=40.31 Aligned_cols=160 Identities=8% Similarity=0.060 Sum_probs=98.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhh----h-cCcee
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE----C-FDKIR 186 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~----~-v~KVR 186 (640)
...++.-++=+++|.++|.+.+=+..| +..+.+.++.|.+.+. +..+.+=.--+.+-...|++ + ++.|+
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~----~~~i~~l~r~~~~di~~a~~al~~ag~~~v~ 105 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTIT----KSTVCSLSRAIERDIRQAGEAVAPAPKKRIH 105 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCS----SSEEEEEEESSHHHHHHHHHHHTTSSSEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCC----CCeEEEEecCCHHHHHHHHHHHhhCCCCEEE
Confidence 456788899999999999999999877 4678899999887532 23333222224444444444 2 44455
Q ss_pred e-CCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHH
Q 006566 187 V-NPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 265 (640)
Q Consensus 187 I-NPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~ 265 (640)
| .|-+=...+++ +.. -.+..-+.+.+.|+.||++|..+.++.--++- .+| +-+++.
T Consensus 106 if~~~Sd~h~~~~---l~~-------s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r---------~~~----~~~~~~ 162 (370)
T 3rmj_A 106 TFIATSPIHMEYK---LKM-------KPKQVIEAAVKAVKIAREYTDDVEFSCEDALR---------SEI----DFLAEI 162 (370)
T ss_dssp EEEECSHHHHHHT---TCC-------CHHHHHHHHHHHHHHHTTTCSCEEEEEETGGG---------SCH----HHHHHH
T ss_pred EEecCcHHHHHHH---hCC-------CHHHHHHHHHHHHHHHHHcCCEEEEecCCCCc---------cCH----HHHHHH
Confidence 3 22221111111 111 23445567888999999999988776532111 234 556677
Q ss_pred HHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHH
Q 006566 266 ARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302 (640)
Q Consensus 266 ~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~ 302 (640)
++.+.+.|-+ .|+++-+.=..+=..++.+++.+.+
T Consensus 163 ~~~~~~~Ga~--~i~l~DT~G~~~P~~~~~lv~~l~~ 197 (370)
T 3rmj_A 163 CGAVIEAGAT--TINIPDTVGYSIPYKTEEFFRELIA 197 (370)
T ss_dssp HHHHHHHTCC--EEEEECSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCC--EEEecCccCCcCHHHHHHHHHHHHH
Confidence 7788888876 5888887755445555555555543
No 129
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=87.22 E-value=2 Score=45.64 Aligned_cols=110 Identities=10% Similarity=0.006 Sum_probs=82.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+.||+|= .| .--+.+.+++-+++|.+.|.+++==-++. .+.+.++.|+++ +++|+++|=.+ ++.-+.
T Consensus 217 ~G~d~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEqP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 287 (418)
T 3r4e_A 217 YGFDHHLLHD--GH-HRYTPQEAANLGKMLEPYQLFWLEDCTPA-ENQEAFRLVRQH-----TVTPLAVGEIFNTIWDAK 287 (418)
T ss_dssp HCSSSEEEEE--CT-TCSCHHHHHHHHHHHGGGCCSEEESCSCC-SSGGGGHHHHHH-----CCSCEEECTTCCSGGGTH
T ss_pred cCCCCeEEEe--CC-CCCCHHHHHHHHHHHHhhCCCEEECCCCc-cCHHHHHHHHhc-----CCCCEEEcCCcCCHHHHH
Confidence 5777888873 12 23468888888899999999888533332 345667888875 78999999554 577777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.+++. ++-|.|.|+..|.-.. ...+...|+++|+++=++.
T Consensus 288 ~~l~~~a~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~~~h~ 329 (418)
T 3r4e_A 288 DLIQNQLIDYIRATVVGAGGLTH----------------------LRRIADLASLYQVRTGCHG 329 (418)
T ss_dssp HHHHTTCCSEECCCTTTTTHHHH----------------------HHHHHHHHHHTTCEEEECC
T ss_pred HHHHcCCCCeEecCccccCCHHH----------------------HHHHHHHHHHcCCEEeecC
Confidence 77654 9999999999987442 6789999999999985554
No 130
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=87.16 E-value=1.7 Score=45.57 Aligned_cols=107 Identities=10% Similarity=0.168 Sum_probs=81.5
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-||+|=- | ..-+.+.+++-+++|.+.|.+.+==-++ ..+.+.++.|+++ +++|+++|=.+ ++.-+.
T Consensus 217 vG~d~~l~vDa--n-~~~~~~~ai~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 287 (398)
T 2pp0_A 217 LGDEFPLMVDA--N-QQWDRETAIRMGRKMEQFNLIWIEEPLD-AYDIEGHAQLAAA-----LDTPIATGEMLTSFREHE 287 (398)
T ss_dssp HCSSSCEEEEC--T-TCSCHHHHHHHHHHHGGGTCSCEECCSC-TTCHHHHHHHHHH-----CSSCEEECTTCCSHHHHH
T ss_pred cCCCCeEEEEC--C-CCCCHHHHHHHHHHHHHcCCceeeCCCC-hhhHHHHHHHHhh-----CCCCEEecCCcCCHHHHH
Confidence 57788888732 2 2346788889999999999988643333 2467788888885 68999999654 678887
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEE
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIR 235 (640)
.+++. ++-|.|.|...|.-.. ...+++.|+++|+++=
T Consensus 288 ~~i~~~~~d~v~ik~~~~GGite----------------------~~~i~~~A~~~gi~~~ 326 (398)
T 2pp0_A 288 QLILGNASDFVQPDAPRVGGISP----------------------FLKIMDLAAKHGRKLA 326 (398)
T ss_dssp HHHHTTCCSEECCCHHHHTSHHH----------------------HHHHHHHHHHTTCEEC
T ss_pred HHHHcCCCCEEEeCccccCCHHH----------------------HHHHHHHHHHcCCeEe
Confidence 77665 9999999998887442 6789999999999873
No 131
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=87.10 E-value=1.2 Score=47.31 Aligned_cols=110 Identities=8% Similarity=0.031 Sum_probs=84.2
Q ss_pred ecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHH
Q 006566 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175 (640)
Q Consensus 97 ~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~A 175 (640)
.+|.+-||+|= .| ..-|.+.+++-+++|.+.|.+.+==-+| ..+.+.+++|+++ +++|+++|=++ ++.-+
T Consensus 226 avG~d~~L~vD--aN-~~~~~~~Ai~~~~~Le~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 296 (412)
T 3stp_A 226 VIGYDNDLMLE--CY-MGWNLDYAKRMLPKLAPYEPRWLEEPVI-ADDVAGYAELNAM-----NIVPISGGEHEFSVIGC 296 (412)
T ss_dssp HHCSSSEEEEE--CT-TCSCHHHHHHHHHHHGGGCCSEEECCSC-TTCHHHHHHHHHT-----CSSCEEECTTCCSHHHH
T ss_pred HcCCCCeEEEE--CC-CCCCHHHHHHHHHHHHhcCCCEEECCCC-cccHHHHHHHHhC-----CCCCEEeCCCCCCHHHH
Confidence 35778888884 22 2357888888899999999998865454 2367788888884 88999999664 57777
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
..+++. +|-|.|.|+..|.-.. ...+...|+++|+++=+|
T Consensus 297 ~~li~~~a~D~v~ik~~~~GGit~----------------------a~kia~~A~a~gi~v~~h 338 (412)
T 3stp_A 297 AELINRKAVSVLQYDTNRVGGITA----------------------AQKINAIAEAAQIPVIPH 338 (412)
T ss_dssp HHHHHTTCCSEECCCHHHHTHHHH----------------------HHHHHHHHHHHTCCBCCS
T ss_pred HHHHHcCCCCEEecChhhcCCHHH----------------------HHHHHHHHHHcCCEEEec
Confidence 777754 9999999999987442 678899999999998443
No 132
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=87.04 E-value=4.6 Score=40.17 Aligned_cols=101 Identities=19% Similarity=0.233 Sum_probs=65.6
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH------H--------------HHHHHHHHHHhhcCCCCcceeec
Q 006566 108 TMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR------E--------------ADACFEIKNSLVQKNYNIPLVAD 167 (640)
Q Consensus 108 SMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~------~--------------A~~l~~I~~~L~~~g~~iPLVAD 167 (640)
+.+..+ -|.+.+++.++.|.++|+|++=+-+|-.+ . .+..-++.+++++.+.++|++.=
T Consensus 22 ~i~~gd-p~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm 100 (268)
T 1qop_A 22 FVTLGD-PGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLL 100 (268)
T ss_dssp EEETTS-SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEE
T ss_pred EeeCCC-CCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEE
Confidence 334443 46688999999999999999999986521 1 11122444445555678998774
Q ss_pred cCCCH-------HHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 168 IHFAP-------SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 168 IHF~~-------~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
+-+|| +.+..++++ ++-|=+..--+ +...++++.||++|...
T Consensus 101 ~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~-------------------------e~~~~~~~~~~~~g~~~ 150 (268)
T 1qop_A 101 MYANLVFNNGIDAFYARCEQVGVDSVLVADVPV-------------------------EESAPFRQAALRHNIAP 150 (268)
T ss_dssp ECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCG-------------------------GGCHHHHHHHHHTTCEE
T ss_pred EcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCH-------------------------HHHHHHHHHHHHcCCcE
Confidence 44455 556667777 77665531110 23667889999999864
No 133
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=86.99 E-value=2.8 Score=43.15 Aligned_cols=109 Identities=17% Similarity=0.274 Sum_probs=80.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHH--cCCCEEEEecC-CHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD--QGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIHF-APS 173 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~--aGceiVRvtvp-~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~ 173 (640)
+|.+-+|+|=- | ..-|.+.+++-+++|.+ .|.+.+ -=| ...+.+.+++++++ +++|+++|=.+ ++.
T Consensus 182 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~~~~i~~i--EqP~~~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~ 251 (366)
T 1tkk_A 182 VGSAVKLRLDA--N-QGWRPKEAVTAIRKMEDAGLGIELV--EQPVHKDDLAGLKKVTDA-----TDTPIMADESVFTPR 251 (366)
T ss_dssp HCSSSEEEEEC--T-TCSCHHHHHHHHHHHHHTTCCEEEE--ECCSCTTCHHHHHHHHHH-----CSSCEEECTTCCSHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHhhcCCCceEE--ECCCCcccHHHHHHHHhh-----CCCCEEEcCCCCCHH
Confidence 56677777652 2 23477888888999999 555544 433 12467788888885 78999999664 677
Q ss_pred HHHHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 174 VALRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 174 ~Al~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
-+..+++. ++-|.|.|...|.-.. ...+.+.|+++|+++=+|.
T Consensus 252 ~~~~~i~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~g~~~~~~~ 296 (366)
T 1tkk_A 252 QAFEVLQTRSADLINIKLMKAGGISG----------------------AEKINAMAEACGVECMVGS 296 (366)
T ss_dssp HHHHHHHHTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHhCCCCEEEeehhhhcCHHH----------------------HHHHHHHHHHcCCcEEecC
Confidence 77777754 9999999999887443 6789999999999986664
No 134
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=86.92 E-value=1.8 Score=45.70 Aligned_cols=110 Identities=6% Similarity=-0.033 Sum_probs=81.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-+|+|= .| .--+.+.+++-+++|.+.|.+++==-+|- .+.+.++.|+++ +++|+.+|=++ ++.-+.
T Consensus 207 ~g~~~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEeP~~~-~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 277 (400)
T 4dxk_A 207 VGDKMDIMVE--FH-SMWQLLPAMQIAKALTPYQTFWHEDPIKM-DSLSSLTRYAAV-----SPAPISASETLGSRWAFR 277 (400)
T ss_dssp HGGGSEEEEE--CT-TCBCHHHHHHHHHHTGGGCCSEEECCBCT-TSGGGHHHHHHH-----CSSCEEECTTCCHHHHHH
T ss_pred cCCCceEEEE--CC-CCCCHHHHHHHHHHHhhcCCCEEEcCCCc-ccHHHHHHHHHh-----CCCCEEecCCcCCHHHHH
Confidence 4666777773 22 23567888888899999998888754442 345567778875 78999999655 466676
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.+++. ++-|.+.|+..|.-.. ...+...|+.+|+++=++.
T Consensus 278 ~~l~~~a~d~v~~d~~~~GGit~----------------------~~kia~~A~~~gi~~~~h~ 319 (400)
T 4dxk_A 278 DLLETGAAGVVMLDISWCGGLSE----------------------ARKIASMAEAWHLPVAPHX 319 (400)
T ss_dssp HHHHTTCCCEEEECTTTTTHHHH----------------------HHHHHHHHHHTTCCEEEC-
T ss_pred HHHHcCCCCEEEeCccccCCHHH----------------------HHHHHHHHHHcCCEEEecC
Confidence 66654 9999999999987432 6779999999999996653
No 135
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=86.73 E-value=1.7 Score=46.37 Aligned_cols=106 Identities=9% Similarity=-0.017 Sum_probs=80.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+.||+|= .| .--+.+.+++-+++|.+.|.+++==-+|- .+.+.++.|+++ +++|+++|=.+ ++.-+.
T Consensus 224 ~G~d~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEqP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 294 (425)
T 3vcn_A 224 LGWDVHLLHD--VH-HRLTPIEAARLGKDLEPYRLFWLEDSVPA-ENQAGFRLIRQH-----TTTPLAVGEIFAHVWDAK 294 (425)
T ss_dssp HCSSSEEEEE--CT-TCCCHHHHHHHHHHHGGGCCSEEECCSCC-SSTTHHHHHHHH-----CCSCEEECTTCCSGGGTH
T ss_pred cCCCCEEEEE--CC-CCCCHHHHHHHHHHHHhcCCCEEECCCCh-hhHHHHHHHHhc-----CCCCEEeCCCcCCHHHHH
Confidence 5777888873 12 23467888888899999999988644442 355678888885 78999999554 577777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
.+++. ++-|.|.|+..|.-.. ...+...|+++|+++
T Consensus 295 ~~i~~~a~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~ 332 (425)
T 3vcn_A 295 QLIEEQLIDYLRATVLHAGGITN----------------------LKKIAAFADLHHVKT 332 (425)
T ss_dssp HHHHTTCCSEECCCTTTTTHHHH----------------------HHHHHHHHGGGTCEE
T ss_pred HHHHcCCCCeEecChhhcCCHHH----------------------HHHHHHHHHHcCCEE
Confidence 77654 9999999999987442 678999999999987
No 136
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=86.71 E-value=0.87 Score=47.64 Aligned_cols=109 Identities=16% Similarity=0.160 Sum_probs=77.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (640)
+|.+-+|+|=- | ..-+.+.+++-+++|.+.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+. +.-+.
T Consensus 206 vG~d~~l~vDa--n-~~~~~~~ai~~~~~l~~~~i~~iE~P~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 276 (403)
T 2ox4_A 206 VGPDVDIIVEN--H-GHTDLVSAIQFAKAIEEFNIFFYEEINT-PLNPRLLKEAKKK-----IDIPLASGERIYSRWGFL 276 (403)
T ss_dssp HCTTSEEEEEC--T-TCSCHHHHHHHHHHHGGGCEEEEECCSC-TTSTHHHHHHHHT-----CCSCEEECTTCCHHHHHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHHhhCCCEEeCCCC-hhhHHHHHHHHHh-----CCCCEEecCCcCCHHHHH
Confidence 45566666621 1 2346777888888888887666432222 2456778888874 789999997764 67777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.+++. ++-|.|.|...|.-.. ...++..|+++|+++=+|
T Consensus 277 ~~i~~~~~d~v~ik~~~~GGite----------------------~~~i~~~A~~~g~~~~~h 317 (403)
T 2ox4_A 277 PFLEDRSIDVIQPDLGTCGGFTE----------------------FKKIADMAHIFEVTVQAH 317 (403)
T ss_dssp HHHHTTCCSEECCCHHHHTHHHH----------------------HHHHHHHHHHTTCEECCC
T ss_pred HHHHcCCCCEEecCccccCCHHH----------------------HHHHHHHHHHcCCEEeec
Confidence 77754 9999999999887432 678999999999997443
No 137
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=86.70 E-value=11 Score=35.91 Aligned_cols=138 Identities=12% Similarity=0.116 Sum_probs=79.0
Q ss_pred HHHHHHHHcCCCEEEEecCCH-------HHHHHHHHHHHHhhcCCCCcc-eeeccCCCHHHHHHHhhhcCceeeCCCCCC
Q 006566 122 EEVMRIADQGADLVRITVQGK-------READACFEIKNSLVQKNYNIP-LVADIHFAPSVALRVAECFDKIRVNPGNFA 193 (640)
Q Consensus 122 ~Qi~rl~~aGceiVRvtvp~~-------~~A~~l~~I~~~L~~~g~~iP-LVADIHF~~~~Al~Aa~~v~KVRINPGN~~ 193 (640)
+.+..++++|++-|-+...+. -+.+.+.++++.|.+.|..+. +.+ |-.+ .+|++.-
T Consensus 16 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~--h~~~-------------~~~~~~~- 79 (287)
T 2x7v_A 16 RVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFC--HSGY-------------LINLASP- 79 (287)
T ss_dssp GHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEE--ECCT-------------TCCTTCS-
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcceeEE--eccc-------------ccccCCC-
Confidence 445667788999999965221 123567778888888887752 322 4321 1344331
Q ss_pred chhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCC
Q 006566 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD 273 (640)
Q Consensus 194 d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~ 273 (640)
.. +..++..+.++..++.|++.|.+. |-+..|+-. +.+++...+.+.+.++-+-+.-
T Consensus 80 --~~-------------~~r~~~~~~~~~~i~~A~~lG~~~-v~~~~g~~~-------~~~~~~~~~~~~~~l~~l~~~~ 136 (287)
T 2x7v_A 80 --KD-------------DIWQKSVELLKKEVEICRKLGIRY-LNIHPGSHL-------GTGEEEGIDRIVRGLNEVLNNT 136 (287)
T ss_dssp --SH-------------HHHHHHHHHHHHHHHHHHHHTCCE-EEECCEECT-------TSCHHHHHHHHHHHHHHHHTTC
T ss_pred --CH-------------HHHHHHHHHHHHHHHHHHHcCCCE-EEEecCCCC-------CCCHHHHHHHHHHHHHHHHccc
Confidence 11 112334456888999999999874 555556542 2234444455555555332322
Q ss_pred CCcEEEEEEeCCh-----hhHHHHHHHHHHH
Q 006566 274 FHNFLFSMKASNP-----VVMVQAYRLLVAE 299 (640)
Q Consensus 274 F~diviSmKsSn~-----~~mV~AyRlL~~~ 299 (640)
+++.+.+-.-+. ..+.+....|++.
T Consensus 137 -~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~ 166 (287)
T 2x7v_A 137 -EGVVILLENVSQKGGNIGYKLEQLKKIRDL 166 (287)
T ss_dssp -CSCEEEEECCCCCTTEECSSHHHHHHHHHH
T ss_pred -CCCEEEEeCCCCCCCccCCCHHHHHHHHHh
Confidence 678888876532 1245666666666
No 138
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=86.61 E-value=5.4 Score=41.56 Aligned_cols=225 Identities=15% Similarity=0.195 Sum_probs=135.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHHhhcCCCCccee----eccCC--CHHHHHHHh-hh
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYNIPLV----ADIHF--APSVALRVA-EC 181 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~------~A~~l~~I~~~L~~~g~~iPLV----ADIHF--~~~~Al~Aa-~~ 181 (640)
--.+..+++..+|.+||+-+|=+-+-+.+ +.+.+.++.+.+|++ +++-+- +.+.| ++.-=+.++ +.
T Consensus 29 vTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~-~d~iI~~TTgg~~~~~~~~eeR~~~~~~~ 107 (314)
T 3lot_A 29 VTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQ-SDVVINVTTGGGGTLGIPVEERAKVVPAL 107 (314)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHH-CCCEEEECSSTTGGGTCCHHHHTTHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhc-CCeEEEeCCCCcCCCCCCHHHHHHHHHhc
Confidence 44589999999999999999999988853 677777777777765 443221 23455 543222222 11
Q ss_pred -cCceeeCCC--CCCc--hhhhccccccchH-HHHHHH-hhh----HhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHH
Q 006566 182 -FDKIRVNPG--NFAD--RRAQFEQLEYTDD-EYQKEL-QHI----EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSY 250 (640)
Q Consensus 182 -v~KVRINPG--N~~d--~~k~F~~~eYtde-eY~~El-e~I----~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~r 250 (640)
-|-.=+|.| ||+- ..++|+...|+.| +|.+.- +.+ .+.+..+.+.|+|+|+.-=|-+
T Consensus 108 ~Pe~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~N~~~~i~~~~~~~~e~Gi~pE~e~------------ 175 (314)
T 3lot_A 108 KPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVFRNTFKDLEALSRIFKENDTKPELEC------------ 175 (314)
T ss_dssp CCSEEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEECCCHHHHHHHHHHHHHHTCEEEEEE------------
T ss_pred CCceeeecCCCcccccccccccccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCEEEEEE------------
Confidence 344568999 6652 1223555555533 354432 222 4457788999999999988877
Q ss_pred hCCChHHHHHHHHHHHHHHHHCCC------CcEEEEEEeC---ChhhHHHHHHHHHHHHHH-cCCCcceEEEeecCCCCC
Q 006566 251 YGDSPRGMVESAFEFARICRKLDF------HNFLFSMKAS---NPVVMVQAYRLLVAEMYV-HGWDYPLHLGVTEAGEGE 320 (640)
Q Consensus 251 yGdtp~gMVeSAle~~~i~e~~~F------~diviSmKsS---n~~~mV~AyRlL~~~m~~-~g~dyPLHLGVTEAG~ge 320 (640)
| . .|+++.+..++ +.|. -++|+-++.. ++.. +..+...+.++-. .| .++.|+=.|-.+
T Consensus 176 f--d-~g~l~~~~~l~----~~Gll~~p~~~~~VlGv~~G~~~~p~~-L~~~~~~~~~l~~~~~----~~Wsv~g~Gr~q 243 (314)
T 3lot_A 176 Y--D-IGQIYNTAFMF----HEGYLEPPLRLQFIHGILGGIGTAVED-VLFMKQTADRLIGREN----YTWSLVGAGRFQ 243 (314)
T ss_dssp C--S-HHHHHHHHHHH----HTTCSCSSEEEEEEECCBTSCCCCHHH-HHHHHHHHHHHTCGGG----EEEEEEECGGGH
T ss_pred E--C-HHHHHHHHHHH----HCCCCCCCceEEEEecCCCCCCCCHHH-HHHHHHHhhhccCCCC----CeEEEEecChhh
Confidence 2 1 36776665544 4444 4667766533 4433 2222222222211 11 578888887777
Q ss_pred cceeehHHHHHHHhhhcCCcEEEeecCC---CCchhhHHHHHHHh-hc
Q 006566 321 DGRMKSAIGIGTLLQDGLGDTIRVSLTE---PPEKEIDPCRRLAN-LG 364 (640)
Q Consensus 321 dGrIKSAiGIG~LL~DGIGDTIRVSLTe---dP~~Ei~va~~ILq-~~ 364 (640)
--..-.|+.+|.-+-=|+.|+++.+--+ +-.+-|.-+.+|++ ++
T Consensus 244 ~p~~~~A~~~GGhvRVGlEDnl~~~~G~lA~sNa~lV~~~~~i~~~lG 291 (314)
T 3lot_A 244 MPLGTLAVIMGGDVRVGLEDSLYIERGKLAKSNAEQVEKMVRIVKELG 291 (314)
T ss_dssp HHHHHHHHHTTCEEEESTTTCSEEETTEECSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCceEEccCcccccCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 6777778888888888888888876332 11233555566666 53
No 139
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=86.54 E-value=26 Score=34.40 Aligned_cols=161 Identities=13% Similarity=0.062 Sum_probs=98.2
Q ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC----CHH----HHHHHHHHHHHhhcCCCCcceeeccCC----
Q 006566 103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ----GKR----EADACFEIKNSLVQKNYNIPLVADIHF---- 170 (640)
Q Consensus 103 PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp----~~~----~A~~l~~I~~~L~~~g~~iPLVADIHF---- 170 (640)
.|-++|.+-. ..+.+.. +..++++|.+-|=+... +.. +.+.++++++.|.+.|..+.-+. .|+
T Consensus 4 klg~~~~~~~-~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~-~~~~g~~ 78 (340)
T 2zds_A 4 NFTLFTGQWA-DLPLEEV---CRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAIS-NHLVGQA 78 (340)
T ss_dssp CEEEESGGGT-TSCHHHH---HHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEE-EHHHHHH
T ss_pred ceEEeecccC-CCCHHHH---HHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEEee-ccccccc
Confidence 3566766554 3455544 45566789999999862 211 22457788888888888775431 121
Q ss_pred ----------------------CH------------HHHHHHhhh-cCceeeCCCCCCchh-hhccccccchHHHHHHHh
Q 006566 171 ----------------------AP------------SVALRVAEC-FDKIRVNPGNFADRR-AQFEQLEYTDDEYQKELQ 214 (640)
Q Consensus 171 ----------------------~~------------~~Al~Aa~~-v~KVRINPGN~~d~~-k~F~~~eYtdeeY~~Ele 214 (640)
+| +....|.+. +..|++.||...... ..|... .++.+.+.++
T Consensus 79 ~~~p~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~--~~~~~~~~~~ 156 (340)
T 2zds_A 79 VCDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPA--PESMIERGYQ 156 (340)
T ss_dssp HHCSCCSHHHHHHSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCC--CHHHHHHHHH
T ss_pred cccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCC--cccchHHHHH
Confidence 22 112234445 889999999764211 001100 1233667788
Q ss_pred hhHhhHHHHHHHHHHcCCeEEEee-CCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCC-CCcEEEEEEeCCh
Q 006566 215 HIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD-FHNFLFSMKASNP 286 (640)
Q Consensus 215 ~I~~~f~~lV~~~Ke~g~aIRIGv-NhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~-F~diviSmKsSn~ 286 (640)
++.+.+.++.+.|+++|+ +|++ ||..- +..++. +..+++++.| -.++-+-+=..+.
T Consensus 157 ~~~~~l~~l~~~a~~~Gv--~l~lEn~~~~-------~~~~~~-------~~~~ll~~v~~~~~vg~~~D~~H~ 214 (340)
T 2zds_A 157 DFADRWNPILDVFDAEGV--RFAHEVHPSE-------IAYDYW-------TTHRALEAVGHRPAFGLNFDPSHF 214 (340)
T ss_dssp HHHHHHHHHHHHHHHHTC--EEEEECCTTS-------SCCSHH-------HHHHHHHHTTTCTTEEEEECCHHH
T ss_pred HHHHHHHHHHHHHHHcCC--EEEEEcCCCc-------ccCCHH-------HHHHHHHhcCCCCCeeEEEchhhH
Confidence 999999999999999997 5566 55421 123443 4467888888 6778887755553
No 140
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=86.46 E-value=2.4 Score=44.23 Aligned_cols=109 Identities=10% Similarity=0.017 Sum_probs=81.5
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-+|+|=- | ..-+.+.+++-+++|.+.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+ ++.-+.
T Consensus 207 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 277 (392)
T 1tzz_A 207 IGKDAQLAVDA--N-GRFNLETGIAYAKMLRDYPLFWYEEVGD-PLDYALQAALAEF-----YPGPMATGENLFSHQDAR 277 (392)
T ss_dssp HTTTCEEEEEC--T-TCCCHHHHHHHHHHHTTSCCSEEECCSC-TTCHHHHHHHTTT-----CCSCEEECTTCCSHHHHH
T ss_pred cCCCCeEEEEC--C-CCCCHHHHHHHHHHHHHcCCCeecCCCC-hhhHHHHHHHHhh-----CCCCEEECCCCCCHHHHH
Confidence 67788888732 2 2346788888899999999887642222 2456777777763 78999999665 577777
Q ss_pred HHhh------hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCe---EEEe
Q 006566 177 RVAE------CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRA---VRIG 237 (640)
Q Consensus 177 ~Aa~------~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~a---IRIG 237 (640)
.+++ .++-|.|.|...|.-.. ...++..|+++|++ +=+|
T Consensus 278 ~~i~~~~~~~~~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 278 NLLRYGGMRPDRDWLQFDCALSYGLCE----------------------YQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp HHHHHSCCCTTTCEECCCTTTTTCHHH----------------------HHHHHHHHHHTTCCGGGBCCS
T ss_pred HHHHcCCCccCCcEEEECccccCCHHH----------------------HHHHHHHHHHCCCCCceEeec
Confidence 7766 78999999999988442 67899999999998 6445
No 141
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=86.44 E-value=3.7 Score=40.28 Aligned_cols=61 Identities=16% Similarity=0.179 Sum_probs=41.6
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHH----HHHHHHHHHHhhcCCCCccee
Q 006566 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE----ADACFEIKNSLVQKNYNIPLV 165 (640)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~----A~~l~~I~~~L~~~g~~iPLV 165 (640)
.+|.++|++-.+..+.+..+ ..++++|++-|=+..+.... ...++++++.|.+.|..+..+
T Consensus 23 ~klgi~~~~~~~~~~~~~~l---~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~ 87 (296)
T 2g0w_A 23 CPITISSYTLGTEVSFPKRV---KVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEV 87 (296)
T ss_dssp CCEEECGGGGTTTSCHHHHH---HHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEE
T ss_pred CCceeechhcCCCCCHHHHH---HHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEee
Confidence 46788888877656666554 55677899999988753321 234667788777777776554
No 142
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=86.43 E-value=5 Score=42.78 Aligned_cols=100 Identities=14% Similarity=0.062 Sum_probs=78.6
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEEecC-CHHHHHHHHHHHHHhhcCCCCcceeecc--CCCHHHHHHHhhh--cCceeeC
Q 006566 115 KDVAGTVEEVMRIAD-QGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADI--HFAPSVALRVAEC--FDKIRVN 188 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~-aGceiVRvtvp-~~~~A~~l~~I~~~L~~~g~~iPLVADI--HF~~~~Al~Aa~~--v~KVRIN 188 (640)
-+.+..++-+++|.+ .+ |.=|-=| ..++-+.++.+++++ |.++||++|= .+++.-...+++. ++-|.|.
T Consensus 267 ~t~~~ai~~~~~L~~~~~--i~~iEePl~~~d~~~~~~l~~~~---~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik 341 (431)
T 2fym_A 267 FTSEEFTHFLEELTKQYP--IVSIEDGLDESDWDGFAYQTKVL---GDKIQLVGDDLFVTNTKILKEGIEKGIANSILIK 341 (431)
T ss_dssp ECHHHHHHHHHHHHHHSC--EEEEESCSCTTCHHHHHHHHHHH---TTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC
T ss_pred CCHHHHHHHHHHHHHhCC--ceEEECCCCcccHHHHHHHHHHh---CCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEEC
Confidence 367888888889988 55 7777655 345678999999864 3489999996 4678877777754 9999999
Q ss_pred CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCC
Q 006566 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG 241 (640)
Q Consensus 189 PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhG 241 (640)
|..+|.-.. ...++..|+++|+++=+|-+.|
T Consensus 342 ~~~~GGite----------------------~~~i~~~A~~~g~~~~~~h~~g 372 (431)
T 2fym_A 342 FNQIGSLTE----------------------TLAAIKMAKDAGYTAVISHRSG 372 (431)
T ss_dssp GGGTCSHHH----------------------HHHHHHHHHHTTCEEEEECCSS
T ss_pred ccccCCHHH----------------------HHHHHHHHHHCCCeEEEeCCCC
Confidence 999998442 6779999999999998887664
No 143
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=86.36 E-value=1.1 Score=47.03 Aligned_cols=111 Identities=11% Similarity=0.025 Sum_probs=78.2
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+-|++|= .| ..-|.+.+++-+++|.+.|. .+==-++ +-+.+..+++ .+++|+++|=. +++.-+.
T Consensus 186 ~g~~~~l~vD--an-~~~~~~~a~~~~~~l~~~~i-~iEqP~~---~~~~~~~l~~-----~~~iPIa~dE~~~~~~~~~ 253 (378)
T 3eez_A 186 REPGEIVLYD--VN-RGWTRQQALRVMRATEDLHV-MFEQPGE---TLDDIAAIRP-----LHSAPVSVDECLVTLQDAA 253 (378)
T ss_dssp CCTTCEEEEE--CT-TCCCHHHHHHHHHHTGGGTC-CEECCSS---SHHHHHHTGG-----GCCCCEEECTTCCSHHHHH
T ss_pred cCCCceEEEE--CC-CCCCHHHHHHHHHHhccCCe-EEecCCC---CHHHHHHHHh-----hCCCCEEECCCCCCHHHHH
Confidence 5666777763 12 22356777777778888876 5432223 4455555555 47899999955 4577777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCC
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGS 242 (640)
.+++. ++-|.|.|+..|.-.. +..+...|+++|+++=+|.+.+|
T Consensus 254 ~~l~~~~~d~v~ik~~~~GGit~----------------------~~~ia~~A~~~g~~~~~~~~~es 299 (378)
T 3eez_A 254 RVARDGLAEVFGIKLNRVGGLTR----------------------AARMRDIALTHGIDMFVMATGGS 299 (378)
T ss_dssp HHHHTTCCSEEEEEHHHHTSHHH----------------------HHHHHHHHHHTTCEEEEECSSCS
T ss_pred HHHHcCCCCEEEeCchhcCCHHH----------------------HHHHHHHHHHcCCEEEcCCCCCC
Confidence 77754 9999999999987443 78899999999999988876554
No 144
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=86.29 E-value=4.3 Score=39.91 Aligned_cols=91 Identities=12% Similarity=0.096 Sum_probs=72.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFA 193 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~~ 193 (640)
.|.+..++.++++.+.|.++|=++..+....+.++.+++++. ++-+-|+.=++..-+..|+++ ++-|= -|+.
T Consensus 35 ~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~----~~~igagtvl~~d~~~~A~~aGAd~v~-~p~~-- 107 (225)
T 1mxs_A 35 AREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRP----ELCVGAGTVLDRSMFAAVEAAGAQFVV-TPGI-- 107 (225)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCT----TSEEEEECCCSHHHHHHHHHHTCSSEE-CSSC--
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCc----ccEEeeCeEeeHHHHHHHHHCCCCEEE-eCCC--
Confidence 356778899999999999999999988888888888888742 356677776788888888888 77773 3431
Q ss_pred chhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 194 d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
| .++++.|+++|+++=+|+
T Consensus 108 d--------------------------~~v~~~~~~~g~~~i~G~ 126 (225)
T 1mxs_A 108 T--------------------------EDILEAGVDSEIPLLPGI 126 (225)
T ss_dssp C--------------------------HHHHHHHHHCSSCEECEE
T ss_pred C--------------------------HHHHHHHHHhCCCEEEee
Confidence 1 368899999999987786
No 145
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=86.28 E-value=4.7 Score=39.27 Aligned_cols=92 Identities=17% Similarity=0.196 Sum_probs=72.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCC
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNF 192 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~ 192 (640)
..|.+..++.++++.+.|.++|=++..+....+.++.+++++. ++-+-|+.=++..-+..|++. ++-|= -|+.
T Consensus 24 ~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~----~~~vgagtvi~~d~~~~A~~aGAd~v~-~p~~- 97 (214)
T 1wbh_A 24 VKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVP----EAIVGAGTVLNPQQLAEVTEAGAQFAI-SPGL- 97 (214)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCT----TSEEEEESCCSHHHHHHHHHHTCSCEE-ESSC-
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCc----CCEEeeCEEEEHHHHHHHHHcCCCEEE-cCCC-
Confidence 3566778899999999999999999888888888888888632 355667776778888888888 77773 3431
Q ss_pred CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 193 ~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
-.++++.|+++|+++=+|+
T Consensus 98 ---------------------------d~~v~~~~~~~g~~~i~G~ 116 (214)
T 1wbh_A 98 ---------------------------TEPLLKAATEGTIPLIPGI 116 (214)
T ss_dssp ---------------------------CHHHHHHHHHSSSCEEEEE
T ss_pred ---------------------------CHHHHHHHHHhCCCEEEec
Confidence 1468999999999998887
No 146
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=86.23 E-value=17 Score=37.67 Aligned_cols=207 Identities=14% Similarity=0.125 Sum_probs=130.6
Q ss_pred eeEEEceeecCCCCceEEEeccCCCCC-----CHHHHHHHHHHHHHcCCCEEEEe----------------cCCHHHHHH
Q 006566 89 RTVMVGNVAIGSEHPIRVQTMTTNDTK-----DVAGTVEEVMRIADQGADLVRIT----------------VQGKREADA 147 (640)
Q Consensus 89 r~V~VG~v~IGG~~PI~VQSMt~t~T~-----Dv~atv~Qi~rl~~aGceiVRvt----------------vp~~~~A~~ 147 (640)
..++||++.+ .|-|..-.||+.... =++..++--.+.++-|+-+|=.- .-+.+..+.
T Consensus 7 ~p~~ig~~~l--~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~ 84 (340)
T 3gr7_A 7 SPYTIRGLTL--KNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAG 84 (340)
T ss_dssp SCEEETTEEE--SSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHH
T ss_pred CCEeECCEEE--cCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHH
Confidence 4588888888 789999999876543 26777777788888887776321 113467889
Q ss_pred HHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHH
Q 006566 148 CFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKC 227 (640)
Q Consensus 148 l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~ 227 (640)
++++.+..++.|..+ ++=++-.-+.+.. ..--+-|-.+......-...+.|. +|+++|.+.|..-.+.|
T Consensus 85 ~~~~~~~vh~~G~~i--~~QL~H~Gr~~~~-----~~~~~~pS~~~~~~~~~~p~~mt~----~eI~~ii~~f~~aA~~a 153 (340)
T 3gr7_A 85 LRELVGLVKEHGAAI--GIQLAHAGRKSQV-----PGEIIAPSAVPFDDSSPTPKEMTK----ADIEETVQAFQNGARRA 153 (340)
T ss_dssp HHHHHHHHHHTTCEE--EEEEECCGGGCCS-----SSCCEESSSCCSSTTSCCCEECCH----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeE--EEEeccCCCccCC-----CCCccCCCCccccCCCCCCccCCH----HHHHHHHHHHHHHHHHH
Confidence 999999999988653 4443322221110 000122333221110001234554 56778888899999999
Q ss_pred HHcCC-eEEEeeCCCCCcHhHHH--------HhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCCh-----hhHHHHH
Q 006566 228 KKYGR-AVRIGTNHGSLSDRIMS--------YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP-----VVMVQAY 293 (640)
Q Consensus 228 Ke~g~-aIRIGvNhGSLs~ril~--------ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~-----~~mV~Ay 293 (640)
++.|- .|-|=.-||-|-+.+++ .||.+.+.-..-++|-++-+++.= ++.|++|-|-. -...+.+
T Consensus 154 ~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v--~~pv~vRls~~~~~~~g~~~~~~ 231 (340)
T 3gr7_A 154 KEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW--DGPLFVRISASDYHPDGLTAKDY 231 (340)
T ss_dssp HHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC--CSCEEEEEESCCCSTTSCCGGGH
T ss_pred HHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc--CCceEEEeccccccCCCCCHHHH
Confidence 99885 46666667777666654 477666665556666666444432 55678887731 1234567
Q ss_pred HHHHHHHHHcCCCcceEE
Q 006566 294 RLLVAEMYVHGWDYPLHL 311 (640)
Q Consensus 294 RlL~~~m~~~g~dyPLHL 311 (640)
..+++.+++.|.+| ||+
T Consensus 232 ~~la~~L~~~Gvd~-i~v 248 (340)
T 3gr7_A 232 VPYAKRMKEQGVDL-VDV 248 (340)
T ss_dssp HHHHHHHHHTTCCE-EEE
T ss_pred HHHHHHHHHcCCCE-EEE
Confidence 77899999999997 665
No 147
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=86.19 E-value=2.6 Score=44.66 Aligned_cols=110 Identities=9% Similarity=0.028 Sum_probs=82.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEe-cCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRIT-VQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVA 175 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvt-vp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~A 175 (640)
+|.+-+|+|= .| ..-+.+.+++-+++|.+.|.+++=-- ++ ..+.+.++.|+++ +++|+.+|=. +++.-+
T Consensus 210 ~g~d~~l~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEqP~~~-~~~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 280 (410)
T 3dip_A 210 VGQRIEIMCE--LH-SLWGTHAAARICNALADYGVLWVEDPIAK-MDNIPAVADLRRQ-----TRAPICGGENLAGTRRF 280 (410)
T ss_dssp HTTSSEEEEE--CT-TCBCHHHHHHHHHHGGGGTCSEEECCBSC-TTCHHHHHHHHHH-----HCCCEEECTTCCSHHHH
T ss_pred cCCCceEEEE--CC-CCCCHHHHHHHHHHHHhcCCCEEECCCCC-cccHHHHHHHHhh-----CCCCEEecCCcCCHHHH
Confidence 4667777773 12 33567888888899999998887643 33 3457778888885 7899999954 457777
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
..+++. ++-|.|.|+..|.-.. ...+...|+++|+++=++.
T Consensus 281 ~~~l~~~~~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~~~h~ 323 (410)
T 3dip_A 281 HEMLCADAIDFVMLDLTWCGGLSE----------------------GRKIAALAETHARPLAPHX 323 (410)
T ss_dssp HHHHHTTCCSEEEECTTTSSCHHH----------------------HHHHHHHHHHTTCCEEECS
T ss_pred HHHHHcCCCCeEeecccccCCHHH----------------------HHHHHHHHHHcCCEEeeeC
Confidence 777654 9999999999987442 6779999999999985543
No 148
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=86.17 E-value=4 Score=42.46 Aligned_cols=229 Identities=14% Similarity=0.197 Sum_probs=134.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHHhhcCCCCccee----eccCCCHHHHHHHhhh--c
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYNIPLV----ADIHFAPSVALRVAEC--F 182 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~------~A~~l~~I~~~L~~~g~~iPLV----ADIHF~~~~Al~Aa~~--v 182 (640)
--.+..+++..++++||+-+|=+-+-+.+ +.+.+.++.+.+|++ +++.+. +.+.+++.-=+..++. -
T Consensus 29 vTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~-~d~iI~~TTgg~~~~~~eerla~~~~~~P 107 (311)
T 3e49_A 29 VTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSN-TDAVINLTTGGSPHMTVEERLRPATHYMP 107 (311)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHH-CCCEEEECSCSCTTSCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHh-CCcEEEECCCCCCCCCHHHHHHHHHhcCC
Confidence 34588999999999999999999988743 555666666666553 665443 5677887533333322 3
Q ss_pred CceeeCCCC--CC--chhhhccccccc-hHHHHHHH-hhh----HhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhC
Q 006566 183 DKIRVNPGN--FA--DRRAQFEQLEYT-DDEYQKEL-QHI----EEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252 (640)
Q Consensus 183 ~KVRINPGN--~~--d~~k~F~~~eYt-deeY~~El-e~I----~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryG 252 (640)
|-.=+|.|- |+ ...++|+...++ +..|.+.- +.+ .+.+..+.+.|+|+|+..=|.+ |
T Consensus 108 e~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~n~~~~i~~~~~~~~e~Gi~pE~e~------------f- 174 (311)
T 3e49_A 108 ELASLNMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVFKNTFADIEFILKTCGGNGTRFEFEC------------Y- 174 (311)
T ss_dssp SEEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEECCCHHHHHHHHHHHHTTTCEEEEEE------------C-
T ss_pred CeeeecCCCcccccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeeEEEE------------E-
Confidence 445678885 54 112224433332 12233322 111 2357789999999999998888 2
Q ss_pred CChHHHHHHHHHHHHH--HHHCCCCcEEEEEEe---CChhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehH
Q 006566 253 DSPRGMVESAFEFARI--CRKLDFHNFLFSMKA---SNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSA 327 (640)
Q Consensus 253 dtp~gMVeSAle~~~i--~e~~~F~diviSmKs---Sn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSA 327 (640)
+ .|++..+..+++- +..--|-++|+-++. +++.. +..+...+.++--. ..+..|+=.|-.+--....|
T Consensus 175 -d-~g~l~~~~~l~~~Gl~~~p~~~~~vlGv~~g~~~~~~~-L~~~~~~~~~~~~~----~~~wsv~~~Gr~~~p~~~~A 247 (311)
T 3e49_A 175 -D-TSHLYNLAHFVDRKLATPPFFVQTVFGLLGGIGPHPED-LAHMRRTADRLFGA----DYVWSILGAGRHQIPLASIG 247 (311)
T ss_dssp -S-HHHHHHHHHHHHTTCSCSSEEEEEEESCTTSCCCCHHH-HHHHHHHHHHHHGG----GEEEEEEECGGGHHHHHHHH
T ss_pred -C-HHHHHHHHHHHHcCCCCCCeEEEEEecCCCCCCCCHHH-HHHHHHHHHhhCCC----CCeEEEEeeChhhHHHHHHH
Confidence 2 3677766555431 221123466666554 55543 33443333333212 24667777776665666677
Q ss_pred HHHHHHhhhcCCcEEEeecCC---CCchhhHHHHHHHh-hc
Q 006566 328 IGIGTLLQDGLGDTIRVSLTE---PPEKEIDPCRRLAN-LG 364 (640)
Q Consensus 328 iGIG~LL~DGIGDTIRVSLTe---dP~~Ei~va~~ILq-~~ 364 (640)
+.+|.-.-=|+.|+++.+--+ +-.+-|.-+.+|++ ++
T Consensus 248 ~~~GGhvRVGlEDnl~~~~G~lA~sNaelV~~~~~i~~~lg 288 (311)
T 3e49_A 248 AAQGANVRVGLEDSLWIAPGELAETNAAQVRKIRQVIEGLS 288 (311)
T ss_dssp HTTTCEEEECTTTCSEEETTEECSCHHHHHHHHHHHHHHTT
T ss_pred HHcCCCeEEcCCcceecCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 777777777888888876321 11233556666666 53
No 149
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=86.07 E-value=1.7 Score=43.00 Aligned_cols=54 Identities=9% Similarity=0.174 Sum_probs=40.3
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceee
Q 006566 112 NDTKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVA 166 (640)
Q Consensus 112 t~T~Dv~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVA 166 (640)
..|-+.+..++...++.+.|||||+|++. +.+|.-.|-+...+. +.+.+.|+||
T Consensus 136 ~~tp~~~el~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~~~~-~~~~~~P~I~ 191 (238)
T 1sfl_A 136 ESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTF-SDTMDCKVVG 191 (238)
T ss_dssp SCCCCHHHHHHHHHHHHTTCCSEEEEEECCSSHHHHHHHHHHHHHH-HHHCSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHHHHH-hhcCCCCEEE
Confidence 34455788889999999999999999975 566666666666554 3456789877
No 150
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=86.05 E-value=1 Score=47.43 Aligned_cols=109 Identities=10% Similarity=0.055 Sum_probs=80.5
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-+|+|=- | ..-+.+.+++-+++|.+.|.+.+==-++ ..+.+.+++++++ +++|+++|=.+ ++.-+.
T Consensus 207 ~G~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 277 (410)
T 2qq6_A 207 VGPEVEVAIDM--H-GRFDIPSSIRFARAMEPFGLLWLEEPTP-PENLDALAEVRRS-----TSTPICAGENVYTRFDFR 277 (410)
T ss_dssp HCSSSEEEEEC--T-TCCCHHHHHHHHHHHGGGCCSEEECCSC-TTCHHHHHHHHTT-----CSSCEEECTTCCSHHHHH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHhhcCCCeEECCCC-hhhHHHHHHHHhh-----CCCCEEeCCCcCCHHHHH
Confidence 46667777621 2 2346788888888999999988653333 2457778888874 78999999654 678777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.+++. ++-|.|.|..+|.-.. ...++..|+++|+++=+|
T Consensus 278 ~~i~~~~~d~v~ik~~~~GGite----------------------~~~ia~~A~~~g~~~~~h 318 (410)
T 2qq6_A 278 ELFAKRAVDYVMPDVAKCGGLAE----------------------AKRIANLAELDYIPFAPH 318 (410)
T ss_dssp HHHHTTCCSEECCBHHHHTHHHH----------------------HHHHHHHHHTTTCCBCCB
T ss_pred HHHHcCCCCEEecCccccCCHHH----------------------HHHHHHHHHHcCCeEeec
Confidence 77754 9999999998887432 678899999999987443
No 151
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=85.86 E-value=8.5 Score=37.03 Aligned_cols=112 Identities=13% Similarity=0.155 Sum_probs=73.5
Q ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC----CHHHH----------------HHHHHHHHHhhcCCCCc
Q 006566 103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ----GKREA----------------DACFEIKNSLVQKNYNI 162 (640)
Q Consensus 103 PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp----~~~~A----------------~~l~~I~~~L~~~g~~i 162 (640)
+..+=|++..+. |.+.++++++++.++ +|.+=+.+| .++-+ ....++.+++++. +++
T Consensus 5 ~~~~~~i~~~~~-~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~-~~~ 81 (248)
T 1geq_A 5 GSLIPYLTAGDP-DKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRH-SST 81 (248)
T ss_dssp TEEEEEEETTSS-CHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTT-CCC
T ss_pred ccEEEEEeCCCC-CHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhh-CCC
Confidence 344557776654 568899999999999 999999966 33111 1112233334443 567
Q ss_pred ceeeccCCCH-------HHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 163 PLVADIHFAP-------SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 163 PLVADIHF~~-------~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
|++.=+-+|| +.+..+++. ++-|.+. +.... ....+++.||++|..+
T Consensus 82 pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~--~~~~~-----------------------~~~~~~~~~~~~g~~~ 136 (248)
T 1geq_A 82 PIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVV--DLPVF-----------------------HAKEFTEIAREEGIKT 136 (248)
T ss_dssp CEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET--TCCGG-----------------------GHHHHHHHHHHHTCEE
T ss_pred CEEEEeccchhhhcCHHHHHHHHHHCCCCEEEEC--CCChh-----------------------hHHHHHHHHHHhCCCe
Confidence 7665443455 667778888 9999994 33221 1456899999999888
Q ss_pred EEeeCCCC
Q 006566 235 RIGTNHGS 242 (640)
Q Consensus 235 RIGvNhGS 242 (640)
=+|++..+
T Consensus 137 ~~~i~~~t 144 (248)
T 1geq_A 137 VFLAAPNT 144 (248)
T ss_dssp EEEECTTC
T ss_pred EEEECCCC
Confidence 78886443
No 152
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=85.85 E-value=18 Score=37.11 Aligned_cols=151 Identities=14% Similarity=0.157 Sum_probs=97.3
Q ss_pred HHHcCCCEEEEecCCH----------------HHHHHHHHHHHHhhcCCCC-cceeeccCC-CH---HHHHHHh----hh
Q 006566 127 IADQGADLVRITVQGK----------------READACFEIKNSLVQKNYN-IPLVADIHF-AP---SVALRVA----EC 181 (640)
Q Consensus 127 l~~aGceiVRvtvp~~----------------~~A~~l~~I~~~L~~~g~~-iPLVADIHF-~~---~~Al~Aa----~~ 181 (640)
+.++|+|++ ++-.+. +-....+.|++ +.+ .|+|||+=| .| .-|...+ +.
T Consensus 45 ~e~aG~d~i-lvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r-----~~~~~~vvaD~pfgsY~s~~~a~~~a~rl~ka 118 (275)
T 3vav_A 45 LDRANVDVQ-LIGDSLGNVLQGQTTTLPVTLDDIAYHTACVAR-----AQPRALIVADLPFGTYGTPADAFASAVKLMRA 118 (275)
T ss_dssp HHHTTCSEE-EECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHH-----TCCSSEEEEECCTTSCSSHHHHHHHHHHHHHT
T ss_pred HHHcCCCEE-EECcHHHHHHcCCCCCCccCHHHHHHHHHHHHh-----cCCCCCEEEecCCCCCCCHHHHHHHHHHHHHc
Confidence 678999999 553332 11344566665 675 999999999 34 3333222 22
Q ss_pred -cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEE--EeeCCCCCcHhHHHHh------C
Q 006566 182 -FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR--IGTNHGSLSDRIMSYY------G 252 (640)
Q Consensus 182 -v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIR--IGvNhGSLs~ril~ry------G 252 (640)
++.|-|-=| . ...+.|+...+.|+|.= ||.+ +.++ +.. |
T Consensus 119 Ga~aVklEdg-----~----------------------~~~~~i~~l~~~GIpv~gHlglt----Pq~~-~~~gg~~vqg 166 (275)
T 3vav_A 119 GAQMVKFEGG-----E----------------------WLAETVRFLVERAVPVCAHVGLT----PQSV-HAFGGFKVQG 166 (275)
T ss_dssp TCSEEEEECC-----G----------------------GGHHHHHHHHHTTCCEEEEEESC----GGGH-HHHC---CCC
T ss_pred CCCEEEECCc-----h----------------------hHHHHHHHHHHCCCCEEEecCCC----ceEE-eccCCeEEEc
Confidence 344444332 1 24667777788999863 4443 3332 223 3
Q ss_pred CChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHHH
Q 006566 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIG 329 (640)
Q Consensus 253 dtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAiG 329 (640)
.|. +-.+.+++-++-+++.|=.=+++-+=.+ +..+.+.+. ++-|+ +|+ =||.+-||+|--.-.
T Consensus 167 rt~-~~a~~~i~rA~a~~eAGA~~ivlE~vp~------~~a~~It~~-----l~iP~-igI-GaG~~cdgQvLv~~D 229 (275)
T 3vav_A 167 KTE-AGAAQLLRDARAVEEAGAQLIVLEAVPT------LVAAEVTRE-----LSIPT-IGI-GAGAECSGQVLVLHD 229 (275)
T ss_dssp CSH-HHHHHHHHHHHHHHHHTCSEEEEESCCH------HHHHHHHHH-----CSSCE-EEE-SSCSCSSEEEECHHH
T ss_pred CCH-HHHHHHHHHHHHHHHcCCCEEEecCCCH------HHHHHHHHh-----CCCCE-EEE-ccCCCCCceeeeHhh
Confidence 343 4569999999999999999998875322 245667777 78898 676 689999999876544
No 153
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=85.80 E-value=5.7 Score=40.33 Aligned_cols=95 Identities=18% Similarity=0.275 Sum_probs=69.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---------HHHHH-----------HHHHHHHHhhcCCCCcceeeccCCCH--
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG---------KREAD-----------ACFEIKNSLVQKNYNIPLVADIHFAP-- 172 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~---------~~~A~-----------~l~~I~~~L~~~g~~iPLVADIHF~~-- 172 (640)
-|.+.|++-++.|.++|||+|=+-+|= ++.|. .+-++.+++|+++.++|+|.=..+||
T Consensus 31 P~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~ 110 (271)
T 3nav_A 31 PNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVY 110 (271)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHH
Confidence 367999999999999999999999887 45432 12234455676678999998777775
Q ss_pred -----HHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 173 -----SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 173 -----~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
+.+..|+++ ++.+=|. |-. + + ...++++.|+++|+..
T Consensus 111 ~~g~~~f~~~~~~aGvdGvIip-----Dlp--~-----------------e-e~~~~~~~~~~~gl~~ 153 (271)
T 3nav_A 111 ARGIDDFYQRCQKAGVDSVLIA-----DVP--T-----------------N-ESQPFVAAAEKFGIQP 153 (271)
T ss_dssp HTCHHHHHHHHHHHTCCEEEET-----TSC--G-----------------G-GCHHHHHHHHHTTCEE
T ss_pred HHhHHHHHHHHHHCCCCEEEEC-----CCC--H-----------------H-HHHHHHHHHHHcCCeE
Confidence 346677787 8887663 211 1 1 2577899999999873
No 154
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=85.75 E-value=13 Score=38.19 Aligned_cols=144 Identities=17% Similarity=0.230 Sum_probs=92.7
Q ss_pred eEEEc-eeecCCCCc-eEEEeccCCCCCCHHHHHHHHHHHHHcC----CCEEEEe------------cCCHHHHHHHHHH
Q 006566 90 TVMVG-NVAIGSEHP-IRVQTMTTNDTKDVAGTVEEVMRIADQG----ADLVRIT------------VQGKREADACFEI 151 (640)
Q Consensus 90 ~V~VG-~v~IGG~~P-I~VQSMt~t~T~Dv~atv~Qi~rl~~aG----ceiVRvt------------vp~~~~A~~l~~I 151 (640)
.|.|. ++.+|+++| +.|-=.+... |.+..++-.++|.++| ..+|.-. .+++.-.+.|+.+
T Consensus 6 ~~~~~~~~~~G~~~~~~viaGPCsie--~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L 83 (285)
T 3sz8_A 6 NVAISPGVTAGNSLPFVLFGGINVLE--SLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIF 83 (285)
T ss_dssp EEEEETTEEEETTSCCEEEEEEEECC--CHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHH
T ss_pred eeccCCCceECCCCceEEEEeCCcCC--CHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHH
Confidence 36665 899999865 5665555543 6778888888887764 6666543 3343344555555
Q ss_pred HHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcC
Q 006566 152 KNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG 231 (640)
Q Consensus 152 ~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g 231 (640)
++-.. ...+|++.++|-...+. .+++.++-+-|--+|+-+ .++++.+-..|
T Consensus 84 ~~~~~--e~Glp~~Tev~d~~~v~-~l~~~vd~lqIgA~~~~n--------------------------~~LLr~va~~g 134 (285)
T 3sz8_A 84 AEVKA--RFGVPVITDVHEAEQAA-PVAEIADVLQVPAFLARQ--------------------------TDLVVAIAKAG 134 (285)
T ss_dssp HHHHH--HHCCCEEEECCSGGGHH-HHHTTCSEEEECGGGTTC--------------------------HHHHHHHHHTS
T ss_pred HHHHH--hcCCeEEEEeCCHHHHH-HHHHhCCEEEECccccCC--------------------------HHHHHHHHccC
Confidence 55432 37799999998655554 446779999998888865 23677777899
Q ss_pred CeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEE
Q 006566 232 RAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF 279 (640)
Q Consensus 232 ~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~divi 279 (640)
.|| ++--|-- -|++.|.. -++.+.+.|=++|++
T Consensus 135 kPV--ilK~G~~---------~t~~ei~~----ave~i~~~Gn~~i~L 167 (285)
T 3sz8_A 135 KPV--NVKKPQF---------MSPTQLKH----VVSKCGEVGNDRVML 167 (285)
T ss_dssp SCE--EEECCTT---------SCGGGTHH----HHHHHHHTTCCCEEE
T ss_pred CcE--EEeCCCC---------CCHHHHHH----HHHHHHHcCCCcEEE
Confidence 998 4433210 25655632 334556777777766
No 155
>4g38_A SIR-HP, sirhp, sulfite reductase [NADPH] hemoprotein beta-compon; snirr, oxidoreductase, sulfite reductase flavoprotein; HET: SRM; 1.56A {Escherichia coli} PDB: 4g39_A* 1aop_A* 2aop_A* 2gep_A* 3aop_A* 3geo_A* 4aop_A* 4gep_A* 5aop_A* 5gep_A* 6gep_A* 7gep_A* 8gep_A*
Probab=85.71 E-value=2.7 Score=46.77 Aligned_cols=152 Identities=15% Similarity=0.159 Sum_probs=91.9
Q ss_pred ChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhH-----HHHHHHHHHHHHHcCCC-----------cceEEEeecCC
Q 006566 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVM-----VQAYRLLVAEMYVHGWD-----------YPLHLGVTEAG 317 (640)
Q Consensus 254 tp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~m-----V~AyRlL~~~m~~~g~d-----------yPLHLGVTEAG 317 (640)
+|+..++-+...+++.+++|..+- -|-.=...+ ++.+|..+++. .|.. .+-|+|+-+-+
T Consensus 278 ~~e~v~~~~~ai~~~~~~~G~r~~---r~kaRlk~li~~~G~e~f~~~v~~~--~g~~~~~~~~~~~~~~~d~~g~~~~~ 352 (570)
T 4g38_A 278 PLEHTLAVAEAVVTTQRDWGNRTD---RKNAKTKYTLERVGVETFKAEVERR--AGIKFEPIRPYEFTGRGDRIGWVKGI 352 (570)
T ss_dssp EGGGHHHHHHHHHHHHHHHCC--------CCSHHHHHHHHCHHHHHHHHHHH--HTCCCBCCCCCCCCBCCCCCEEEECS
T ss_pred CHHHHHHHHHHHHHHHHHhccccc---hhhhHHHHHHHhhhHHHHHHHHHHH--hhcccCCCCccCcCCCccccCceecC
Confidence 677888888888899999987531 111112333 34555544432 2321 23377877666
Q ss_pred CC--------Ccceeeh------HHHHHHHhhhcCCcEEEee------cCCCCchhhHHHHHHHh-hccc----------
Q 006566 318 EG--------EDGRMKS------AIGIGTLLQDGLGDTIRVS------LTEPPEKEIDPCRRLAN-LGMR---------- 366 (640)
Q Consensus 318 ~g--------edGrIKS------AiGIG~LL~DGIGDTIRVS------LTedP~~Ei~va~~ILq-~~~R---------- 366 (640)
+| .-|+|.+ ..+|..+-... |.+||++ |..-|.++++..+.+|+ +++.
T Consensus 353 dG~~~v~v~~~~Grl~~~~~~~~l~~La~iAe~~-gg~iRlT~~Qniil~gv~~e~l~~i~~~L~~~Gl~~~~~~~~~~v 431 (570)
T 4g38_A 353 DDNWHLTLFIENGRILDYPARPLKTGLLEIAKIH-KGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENS 431 (570)
T ss_dssp TTEEEEEECCGGGEECEETTEEHHHHHHHHHHHC-SSEEEECTTSCEEEEEEEGGGHHHHHHHHHHTTTTCCCCHHHHTE
T ss_pred CCcEEEEEEecCCeecCCccHHHHHHHHHHHHHh-CCeEEECCCCcEEEecCCHHHHHHHHHHHHHcCCCCCCCCcccCe
Confidence 55 3488866 46666666554 7899998 55556778888888888 6652
Q ss_pred -------Ccccc-cCch----hhHHhhcc------c--ccccccccccccccCCcc--cccccccccC
Q 006566 367 -------AAELQ-QGVA----PFEEKHRH------Y--FDFQRRSGQLPIQKEGEE--VDYRGVLHRD 412 (640)
Q Consensus 367 -------~CGRt-~dl~----~~~~~i~~------l--~~~~~~vmgciVNGpGE~--AD~g~V~~~~ 412 (640)
.|+.. .|.. .+.+++.+ + ..++++++||+ |+-|+. +|+|-++..+
T Consensus 432 ~aC~G~~~C~~a~~dt~~~a~~L~~~le~~~~~~~l~p~~iki~vSGCp-n~C~~~~~aDIGlvG~~~ 498 (570)
T 4g38_A 432 MACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCP-NGCGRAMLAEVGLVGKAP 498 (570)
T ss_dssp EECCCTTTCTTCSSCSTTTHHHHHHHHHHHHHHTTCTTCCCCEEEESST-TCTTCGGGSSEEEEEEET
T ss_pred EECCCCCcccchhHhHHHHHHHHHHHHHHHHhhcCCCCCceEEEEeCCC-chhhhccccceEEEEecc
Confidence 14431 3322 23333321 2 34677999999 999994 9998776433
No 156
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=85.66 E-value=2.3 Score=44.96 Aligned_cols=109 Identities=12% Similarity=0.097 Sum_probs=78.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-+++|= .|.. -|.+. ++-+++|.+.|.+.+===++ ..+.+.+..++++ +++|+.+|=.+ ++.-+.
T Consensus 202 ~G~~~~L~vD--aN~~-w~~~~-~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 271 (400)
T 3mwc_A 202 VGDHFPLWTD--ANSS-FELDQ-WETFKAMDAAKCLFHEQPLH-YEALLDLKELGER-----IETPICLDESLISSRVAE 271 (400)
T ss_dssp HCTTSCEEEE--CTTC-CCGGG-HHHHHHHGGGCCSCEESCSC-TTCHHHHHHHHHH-----SSSCEEESTTCCSHHHHH
T ss_pred cCCCCEEEEe--CCCC-CCHHH-HHHHHHHHhcCCCEEeCCCC-hhhHHHHHHHHhh-----CCCCEEEeCCcCCHHHHH
Confidence 5777888884 2222 23444 77788899999888642232 2357778888885 78999999554 566666
Q ss_pred HHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 177 ~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.+++ .++-|.|.|+..|.-.. ...+...|+++|+++=+|.
T Consensus 272 ~~~~~~~~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~~~~~ 313 (400)
T 3mwc_A 272 FVAKLGISNIWNIKIQRVGGLLE----------------------AIKIYKIATDNGIKLWGGT 313 (400)
T ss_dssp HHHHTTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHTTCEEEECC
T ss_pred HHHhcCCCCEEEEcchhhCCHHH----------------------HHHHHHHHHHcCCEEEecC
Confidence 6665 49999999999987442 6789999999999985553
No 157
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=85.57 E-value=3.7 Score=39.48 Aligned_cols=176 Identities=16% Similarity=0.141 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCH------HHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHHHHhhh-cCceeeCC
Q 006566 118 AGTVEEVMRIADQGADLVRITVQGK------READACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNP 189 (640)
Q Consensus 118 ~atv~Qi~rl~~aGceiVRvtvp~~------~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al~Aa~~-v~KVRINP 189 (640)
+..++.++.+.++|++.+-++-++. ..++.+++|++ .+++|+++.--++ +.-+..+++. ++.|=+.-
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~-----~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~ 105 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAE-----RVFIPLTVGGGVRSLEDARKLLLSGADKVSVNS 105 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHT-----TCCSCEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHH-----hCCCCEEEECCcCCHHHHHHHHHcCCCEEEECh
Confidence 3567788899999999998874431 23444555555 4789999976666 7777788777 88886643
Q ss_pred CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcC-CeEEEeeCC----CCCcHhHHHHhCCChHHHHHHHHH
Q 006566 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG-RAVRIGTNH----GSLSDRIMSYYGDSPRGMVESAFE 264 (640)
Q Consensus 190 GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g-~aIRIGvNh----GSLs~ril~ryGdtp~gMVeSAle 264 (640)
.-+.++. .+.++ ++.++ -.|++|+.. |...-.+ .|-. +..-.+.+|
T Consensus 106 ~~l~~p~----------------------~~~~~---~~~~~~~~i~~~~~~~~~~g~~~v~~---~g~~-~~~~~~~~e 156 (252)
T 1ka9_F 106 AAVRRPE----------------------LIREL---ADHFGAQAVVLAIDARWRGDFPEVHV---AGGR-VPTGLHAVE 156 (252)
T ss_dssp HHHHCTH----------------------HHHHH---HHHHCGGGEEEEEEEEEETTEEEEEE---TTTT-EEEEEEHHH
T ss_pred HHHhCcH----------------------HHHHH---HHHcCCCcEEEEEEEecCCCCEEEEE---CCCc-cccCCcHHH
Confidence 3332211 13333 33333 246677643 2100000 1100 000123577
Q ss_pred HHHHHHHCCCCcEEEEEEeCChh-----hHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHHHHHHHhhhcCC
Q 006566 265 FARICRKLDFHNFLFSMKASNPV-----VMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLG 339 (640)
Q Consensus 265 ~~~i~e~~~F~diviSmKsSn~~-----~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAiGIG~LL~DGIG 339 (640)
+++.+++.|+.-|++. +.+.. .-.+.++.+.+. .+.|+--+ |=|.+.-.+-.++.-|.
T Consensus 157 ~~~~~~~~G~~~i~~~--~~~~~g~~~g~~~~~i~~l~~~-----~~ipvia~---------GGI~~~~d~~~~~~~Ga- 219 (252)
T 1ka9_F 157 WAVKGVELGAGEILLT--SMDRDGTKEGYDLRLTRMVAEA-----VGVPVIAS---------GGAGRMEHFLEAFQAGA- 219 (252)
T ss_dssp HHHHHHHHTCCEEEEE--ETTTTTTCSCCCHHHHHHHHHH-----CSSCEEEE---------SCCCSHHHHHHHHHTTC-
T ss_pred HHHHHHHcCCCEEEEe--cccCCCCcCCCCHHHHHHHHHH-----cCCCEEEe---------CCCCCHHHHHHHHHCCC-
Confidence 7888888999988886 22211 115566666666 67887442 34555555555554343
Q ss_pred cEEEe
Q 006566 340 DTIRV 344 (640)
Q Consensus 340 DTIRV 344 (640)
|++-|
T Consensus 220 dgv~v 224 (252)
T 1ka9_F 220 EAALA 224 (252)
T ss_dssp SEEEE
T ss_pred HHHHH
Confidence 55544
No 158
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=85.45 E-value=0.5 Score=44.81 Aligned_cols=157 Identities=16% Similarity=0.172 Sum_probs=90.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCH------HHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cCce
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQGK------READACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDKI 185 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~~------~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~KV 185 (640)
+.+.+.+++.++.+.++|++.+=++..+. ...+.+++|++. +++|+++.--. ++.-+..+++. ++.|
T Consensus 29 ~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~-----~~ipvi~~g~i~~~~~~~~~~~~Gad~V 103 (253)
T 1h5y_A 29 IREVGDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEA-----VSIPVLVGGGVRSLEDATTLFRAGADKV 103 (253)
T ss_dssp HHEEECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHH-----CSSCEEEESSCCSHHHHHHHHHHTCSEE
T ss_pred eeecccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHh-----cCCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 33455678899999999999887774432 345566666664 68999976544 47777788887 9999
Q ss_pred eeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCC-eEEEeeCC----CCCcHhHHHHhCCChHHHHH
Q 006566 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR-AVRIGTNH----GSLSDRIMSYYGDSPRGMVE 260 (640)
Q Consensus 186 RINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~-aIRIGvNh----GSLs~ril~ryGdtp~gMVe 260 (640)
-|+-..+.+ -..+.+.++++|. .|.+|++. |.+.-. .+-|... --.
T Consensus 104 ~i~~~~~~~-------------------------~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~--~~~~~~~--~~~ 154 (253)
T 1h5y_A 104 SVNTAAVRN-------------------------PQLVALLAREFGSQSTVVAIDAKWNGEYYEVY--VKGGREA--TGL 154 (253)
T ss_dssp EESHHHHHC-------------------------THHHHHHHHHHCGGGEEEEEEEEECSSSEEEE--ETTTTEE--EEE
T ss_pred EEChHHhhC-------------------------cHHHHHHHHHcCCCcEEEEEEeecCCCcEEEE--EeCCeec--CCC
Confidence 988432222 1123456666774 46777654 311100 0101000 001
Q ss_pred HHHHHHHHHHHCCCCcEEEEEEeCChh-----hHHHHHHHHHHHHHHcCCCcceEE
Q 006566 261 SAFEFARICRKLDFHNFLFSMKASNPV-----VMVQAYRLLVAEMYVHGWDYPLHL 311 (640)
Q Consensus 261 SAle~~~i~e~~~F~diviSmKsSn~~-----~mV~AyRlL~~~m~~~g~dyPLHL 311 (640)
+..|+++.+++.|.+-+.+.- -++. ...+.++.+.+. .+.|+-.
T Consensus 155 ~~~e~~~~~~~~G~d~i~~~~--~~~~g~~~~~~~~~i~~l~~~-----~~~pvia 203 (253)
T 1h5y_A 155 DAVKWAKEVEELGAGEILLTS--IDRDGTGLGYDVELIRRVADS-----VRIPVIA 203 (253)
T ss_dssp EHHHHHHHHHHHTCSEEEEEE--TTTTTTCSCCCHHHHHHHHHH-----CSSCEEE
T ss_pred CHHHHHHHHHhCCCCEEEEec--ccCCCCcCcCCHHHHHHHHHh-----cCCCEEE
Confidence 345667777888887766542 1110 124455666655 5778754
No 159
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=85.45 E-value=0.82 Score=44.22 Aligned_cols=76 Identities=14% Similarity=0.074 Sum_probs=56.8
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCC-cHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHH
Q 006566 221 SPLVEKCKKYGRAVRIGTNHGSL-SDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299 (640)
Q Consensus 221 ~~lV~~~Ke~g~aIRIGvNhGSL-s~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~ 299 (640)
.++++.|+|+|+++ -+|-+|+ .+..-+| .+..+-+.+.+++|++.|. .+++|==|..+... ..++...+.
T Consensus 114 ~~~a~~A~e~gv~l--EIn~s~~~~~~~~~R-----~~~~~~~~~il~l~k~~g~-~ivisSDAh~~~~v-~~~~~~~~l 184 (212)
T 1v77_A 114 HVLAKLMVKKNVAL--GFSLRPLLYSNPYER-----ANLLRFMMKAWKLVEKYKV-RRFLTSSAQEKWDV-RYPRDLISL 184 (212)
T ss_dssp HHHHHHHHHHTCEE--EEESHHHHHSCHHHH-----HHHHHHHHHHHHHHHHHTC-CEEEECCCSSGGGC-CCHHHHHHH
T ss_pred HHHHHHHHHCCeEE--EEECcHHhcCCcchH-----HHHHHHHHHHHHHHHhcCC-CEEEeCCCCChhhc-CCHHHHHHH
Confidence 37899999999999 5666664 2111222 5788999999999999998 89999888887765 666666666
Q ss_pred HHHcCC
Q 006566 300 MYVHGW 305 (640)
Q Consensus 300 m~~~g~ 305 (640)
+...|+
T Consensus 185 ~~~~G~ 190 (212)
T 1v77_A 185 GVVIGM 190 (212)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 555553
No 160
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=85.37 E-value=2.7 Score=45.86 Aligned_cols=100 Identities=17% Similarity=0.270 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHHhhcCCC-CcceeeccCCCHHHHHHHhhh-cCceee--CCCC
Q 006566 119 GTVEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNY-NIPLVADIHFAPSVALRVAEC-FDKIRV--NPGN 191 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvtvp~~---~~A~~l~~I~~~L~~~g~-~iPLVADIHF~~~~Al~Aa~~-v~KVRI--NPGN 191 (640)
.+++.+.+|.++|+|+|=|.+-.. .-.+.++.|++. + ++|+++--=.++..|..++++ +|.|.+ -||.
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~-----~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs 305 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA-----YPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGS 305 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH-----CTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCT
T ss_pred chHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHH-----CCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCc
Confidence 347889999999999999875443 344667777774 5 699988544678899999999 999997 5777
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
....+. +...-. .--+.+.++++.|++.++|+
T Consensus 306 ~~~tr~-~~g~g~----------p~~~~i~~v~~~~~~~~iPV 337 (496)
T 4fxs_A 306 ICTTRI-VTGVGV----------PQITAIADAAGVANEYGIPV 337 (496)
T ss_dssp TBCHHH-HHCCCC----------CHHHHHHHHHHHHGGGTCCE
T ss_pred Cccccc-ccCCCc----------cHHHHHHHHHHHhccCCCeE
Confidence 643221 000000 01123567778888889998
No 161
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=85.31 E-value=2.3 Score=44.85 Aligned_cols=107 Identities=10% Similarity=0.154 Sum_probs=80.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHH-HHHHHHHHHHhhcCCCCcceeeccC-CCHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKRE-ADACFEIKNSLVQKNYNIPLVADIH-FAPSVA 175 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~-A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~A 175 (640)
+|.+-+++|=- | ..-+.+.+++-+++|.+.|.+.+==-++. .+ .+.++.|+++ +++|+.+|=. +++.-+
T Consensus 196 ~g~~~~l~vDa--N-~~~~~~~A~~~~~~L~~~~i~~iEeP~~~-~d~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 266 (392)
T 3ddm_A 196 LGAATPLMADA--N-QGWDLPRARQMAQRLGPAQLDWLEEPLRA-DRPAAEWAELAQA-----APMPLAGGENIAGVAAF 266 (392)
T ss_dssp HCSSSCEEEEC--T-TCCCHHHHHHHHHHHGGGCCSEEECCSCT-TSCHHHHHHHHHH-----CSSCEEECTTCCSHHHH
T ss_pred cCCCceEEEeC--C-CCCCHHHHHHHHHHHHHhCCCEEECCCCc-cchHHHHHHHHHh-----cCCCEEeCCCCCCHHHH
Confidence 57788888842 2 23467888888899999999888643432 34 6778888885 8899999955 457777
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEE
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIR 235 (640)
..+++. ++-|.|.|+..|.-.. ...+...|+++|+++=
T Consensus 267 ~~~i~~~a~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~~ 306 (392)
T 3ddm_A 267 ETALAARSLRVMQPDLAKWGGFSG----------------------CLPVARAVVAAGLRYC 306 (392)
T ss_dssp HHHHHHTCEEEECCCTTTTTHHHH----------------------HHHHHHHHHHTTCEEC
T ss_pred HHHHHcCCCCEEEeCcchhCCHHH----------------------HHHHHHHHHHcCCEEE
Confidence 766653 8999999999987442 6789999999999983
No 162
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=85.22 E-value=1.6 Score=45.21 Aligned_cols=112 Identities=19% Similarity=0.274 Sum_probs=82.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+-+++|= .| ..-|.+.+++-+++|.+.|.+.+==-++ ..+.+.+..++++ +++|+++|=. +++.-+.
T Consensus 180 ~g~~~~l~vD--an-~~~~~~~a~~~~~~L~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 250 (354)
T 3jva_A 180 VGFDIKLRLD--AN-QAWTPKDAVKAIQALADYQIELVEQPVK-RRDLEGLKYVTSQ-----VNTTIMADESCFDAQDAL 250 (354)
T ss_dssp HCTTSEEEEE--CT-TCSCHHHHHHHHHHTTTSCEEEEECCSC-TTCHHHHHHHHHH-----CSSEEEESTTCCSHHHHH
T ss_pred cCCCCeEEEE--CC-CCCCHHHHHHHHHHHHhcCCCEEECCCC-hhhHHHHHHHHHh-----CCCCEEEcCCcCCHHHHH
Confidence 6778888884 12 2346777888888888888776642232 2356777888875 7899999955 5577776
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCC
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNh 240 (640)
.+++. ++-|.|.|+..|.-.. ...+...|+++|+++=+|...
T Consensus 251 ~~l~~~~~d~v~~k~~~~GGit~----------------------~~~i~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 251 ELVKKGTVDVINIKLMKCGGIHE----------------------ALKINQICETAGIECMIGCMA 294 (354)
T ss_dssp HHHHHTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHcCCCCEEEECchhcCCHHH----------------------HHHHHHHHHHcCCeEEecCCC
Confidence 66654 9999999999987443 678999999999999777654
No 163
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=84.72 E-value=1.9 Score=44.71 Aligned_cols=105 Identities=13% Similarity=0.154 Sum_probs=71.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-|++|=- | ..-|.+.+++-+++|. .|. . +-=|-. +.+.++++++ .+++|+++|=.+ ++.-+.
T Consensus 187 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~l~-~~i-~--iEqP~~-d~~~~~~l~~-----~~~iPI~~dE~~~~~~~~~ 253 (378)
T 2qdd_A 187 LPDGHRVTFDV--N-RAWTPAIAVEVLNSVR-ARD-W--IEQPCQ-TLDQCAHVAR-----RVANPIMLDECLHEFSDHL 253 (378)
T ss_dssp CCTTCEEEEEC--T-TCCCHHHHHHHHTSCC-CCC-E--EECCSS-SHHHHHHHHT-----TCCSCEEECTTCCSHHHHH
T ss_pred hCCCCEEEEeC--C-CCCCHHHHHHHHHHhC-CCc-E--EEcCCC-CHHHHHHHHH-----hCCCCEEECCCcCCHHHHH
Confidence 45555665531 1 2234555666666665 554 3 333322 5666777776 378999999665 577777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
.+++. ++-|.|.|+.+|.-.. +..+.+.|+++|+++=+|
T Consensus 254 ~~i~~~~~d~v~ik~~~~GGi~~----------------------~~~i~~~A~~~g~~~~~~ 294 (378)
T 2qdd_A 254 AAWSRGACEGVKIKPNRVGGLTR----------------------ARQIRDFGVSVGWQMHIE 294 (378)
T ss_dssp HHHHHTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHHTCEEEEC
T ss_pred HHHHhCCCCEEEecccccCCHHH----------------------HHHHHHHHHHcCCeEEec
Confidence 77754 9999999999988543 778999999999999776
No 164
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=84.43 E-value=3.8 Score=43.61 Aligned_cols=107 Identities=14% Similarity=0.234 Sum_probs=80.5
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-||+|=- | ..-+.+.+++-+++|.+.|.+++==-++ ..+.+.++.|++.+. ++|+++|=.. ++.-+.
T Consensus 239 ~G~d~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~~~----~iPIa~dE~~~~~~~~~ 310 (441)
T 2hxt_A 239 IGPDIAMAVDA--N-QRWDVGPAIDWMRQLAEFDIAWIEEPTS-PDDVLGHAAIRQGIT----PVPVSTGEHTQNRVVFK 310 (441)
T ss_dssp HCSSSEEEEEC--T-TCCCHHHHHHHHHTTGGGCCSCEECCSC-TTCHHHHHHHHHHHT----TSCEEECTTCCSHHHHH
T ss_pred cCCCCeEEEEC--C-CCCCHHHHHHHHHHHHhcCCCeeeCCCC-HHHHHHHHHHHhhCC----CCCEEEeCCcCCHHHHH
Confidence 67778887732 2 3456788888889999999888643333 346778888887521 6999999664 677777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
..++. ++-|.|.|...|.-.. ...+...|+++|+++
T Consensus 311 ~~i~~~~~d~v~ik~~~~GGite----------------------~~~ia~~A~~~g~~~ 348 (441)
T 2hxt_A 311 QLLQAGAVDLIQIDAARVGGVNE----------------------NLAILLLAAKFGVRV 348 (441)
T ss_dssp HHHHHTCCSEECCCTTTSSHHHH----------------------HHHHHHHHHHTTCEE
T ss_pred HHHHcCCCCEEEeCcceeCCHHH----------------------HHHHHHHHHHcCCeE
Confidence 77654 9999999999987432 678899999999987
No 165
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=84.42 E-value=21 Score=35.17 Aligned_cols=176 Identities=12% Similarity=0.166 Sum_probs=97.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHH--HHHHHHHHHHHhhcCCCCcceeecc-------C--CCHHHHHHHhhhcC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKR--EADACFEIKNSLVQKNYNIPLVADI-------H--FAPSVALRVAECFD 183 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~--~A~~l~~I~~~L~~~g~~iPLVADI-------H--F~~~~Al~Aa~~v~ 183 (640)
.+.+..++|+.++.+.|||+|=+-+.-.+ +.+.+.+..+.||+.--++|++.-+ + .+...-++..+.+
T Consensus 14 ~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~- 92 (238)
T 1sfl_A 14 LSIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDL- 92 (238)
T ss_dssp C---CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHHHHG-
T ss_pred CCHHHHHHHHHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHHHHH-
Confidence 34567788899999999999977764332 2445555555555533368999754 1 2232222222221
Q ss_pred ceee-CCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHH
Q 006566 184 KIRV-NPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262 (640)
Q Consensus 184 KVRI-NPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSA 262 (640)
+|. +| .|.| +|++-. +-++.+..+++.+++.|+.+ |+-+|= |..||. .+..
T Consensus 93 -~~~~~~-d~iD-------vEl~~~-------~~~~~~~~l~~~~~~~~~kv-I~S~Hd---------f~~tp~--~~el 144 (238)
T 1sfl_A 93 -ANINGI-DMID-------IEWQAD-------IDIEKHQRIITHLQQYNKEV-IISHHN---------FESTPP--LDEL 144 (238)
T ss_dssp -GGCTTC-CEEE-------EECCTT-------SCHHHHHHHHHHHHHTTCEE-EEEEEE---------SSCCCC--HHHH
T ss_pred -HHhCCC-CEEE-------EEccCC-------CChHHHHHHHHHHHhcCCEE-EEEecC---------CCCCcC--HHHH
Confidence 122 11 2222 333210 01234667899999998876 777772 223553 4555
Q ss_pred HHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceee
Q 006566 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMK 325 (640)
Q Consensus 263 le~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIK 325 (640)
++.++-+++.|-+=++|-..+.+......-.+.. .++ +.+.+.|+-- -.+|+.|++-
T Consensus 145 ~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~-~~~-~~~~~~P~I~----~~MG~~G~~S 201 (238)
T 1sfl_A 145 QFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAM-STF-SDTMDCKVVG----ISMSKLGLIS 201 (238)
T ss_dssp HHHHHHHHTTCCSEEEEEECCSSHHHHHHHHHHH-HHH-HHHCSSEEEE----EECTGGGHHH
T ss_pred HHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHH-HHH-hhcCCCCEEE----EECCCCchHH
Confidence 6677778899999889999988866544333322 333 2345678621 1345556553
No 166
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=84.39 E-value=3.1 Score=43.21 Aligned_cols=153 Identities=16% Similarity=0.166 Sum_probs=93.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEe----cCCHH----HHHHHHHHHHHhhcCCCCcceeec----------cCC---C
Q 006566 113 DTKDVAGTVEEVMRIADQGADLVRIT----VQGKR----EADACFEIKNSLVQKNYNIPLVAD----------IHF---A 171 (640)
Q Consensus 113 ~T~Dv~atv~Qi~rl~~aGceiVRvt----vp~~~----~A~~l~~I~~~L~~~g~~iPLVAD----------IHF---~ 171 (640)
+..|.+..++. ++++|++-|=+. .|... ..+.+++|++.|.+.|..++-+.= ..| +
T Consensus 31 ~~~~~~e~l~~---aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~spd 107 (393)
T 1xim_A 31 TALDPVEAVHK---LAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIVPMVTTNLFTHPVFKDGGFTSND 107 (393)
T ss_dssp CCCCHHHHHHH---HHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSS
T ss_pred CCCCHHHHHHH---HHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEEEEEecCCcCCcccccCCCCCCC
Confidence 34577665554 556699999998 66432 256788888999999998875532 122 2
Q ss_pred HH----------HHH-HHhhh-cCceeeCCCCCCchhhhccccccc-hHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 172 PS----------VAL-RVAEC-FDKIRVNPGNFADRRAQFEQLEYT-DDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 172 ~~----------~Al-~Aa~~-v~KVRINPGN~~d~~k~F~~~eYt-deeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
+. -++ .|.+. +..|.+.||..+. .|. ...+.+.++++.+.+.++.+.|+++|--|||++
T Consensus 108 ~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~--------~~~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv~l~l 179 (393)
T 1xim_A 108 RSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGA--------EYDSAKDVSAALDRYREALNLLAQYSEDRGYGLRFAI 179 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEE--------SSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCC--------cCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 31 111 23334 8889999985431 011 223567789999999999999999843356676
Q ss_pred -CCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCc-EEEEEEeCC
Q 006566 239 -NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHN-FLFSMKASN 285 (640)
Q Consensus 239 -NhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~d-iviSmKsSn 285 (640)
||..-+. +-.++.+.-+.++++++.|-.+ +-+-+=..+
T Consensus 180 E~~~~~~~---------~~~~~~t~~~~~~ll~~v~~~~~vgl~lD~gH 219 (393)
T 1xim_A 180 EPKPNEPR---------GDILLPTAGHAIAFVQELERPELFGINPETGH 219 (393)
T ss_dssp ECCSSSSS---------SEESSCSHHHHHHHHTTSSSGGGEEECCBHHH
T ss_pred ecCCCCCC---------CCCcCCCHHHHHHHHHHhCCccceEEEEccCC
Confidence 4431110 0012223345556777877766 666654433
No 167
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=84.27 E-value=2.7 Score=43.56 Aligned_cols=85 Identities=16% Similarity=0.128 Sum_probs=58.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC-C-HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ-G-KREADACFEIKNSLVQKNYNIPLVADIH--FAPS 173 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp-~-~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~ 173 (640)
+||...=+|.+..+....|.+..++++.++.++|.+.|.+-+- + ..+.+.++.|++. -|.++||..|.| |++.
T Consensus 127 lGg~~~~~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a---~g~d~~l~vDan~~~~~~ 203 (379)
T 2rdx_A 127 LGGKLCDGAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGADWQSDIDRIRACLPL---LEPGEKAMADANQGWRVD 203 (379)
T ss_dssp TTSCCCSSEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHGGG---SCTTCEEEEECTTCSCHH
T ss_pred cCCCCCCceeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccCCHHHHHHHHHHHHHh---cCCCCEEEEECCCCCCHH
Confidence 4554322334443333457899999999999999999999875 2 3345666666653 366899999988 6677
Q ss_pred HHHHHhhhcCce
Q 006566 174 VALRVAECFDKI 185 (640)
Q Consensus 174 ~Al~Aa~~v~KV 185 (640)
-|...++.+++.
T Consensus 204 ~a~~~~~~l~~~ 215 (379)
T 2rdx_A 204 NAIRLARATRDL 215 (379)
T ss_dssp HHHHHHHHTTTS
T ss_pred HHHHHHHHHHhC
Confidence 676666667664
No 168
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=83.90 E-value=2.1 Score=40.79 Aligned_cols=156 Identities=10% Similarity=0.044 Sum_probs=92.6
Q ss_pred eEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH---HHHHHHHHHHHhhcCCCCcceee-ccCCC-H--H---
Q 006566 104 IRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR---EADACFEIKNSLVQKNYNIPLVA-DIHFA-P--S--- 173 (640)
Q Consensus 104 I~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~---~A~~l~~I~~~L~~~g~~iPLVA-DIHF~-~--~--- 173 (640)
+.+.|++. ...+.+. .+..++++|.+-|=+..+... +...++++++.|.+.|..+..+. .+.|. | .
T Consensus 6 ~~~~~~~~-~~~~~~~---~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~ 81 (281)
T 3u0h_A 6 PCLHPTLV-DETSLVL---YLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLANLGLPLNLYDSEPVFLR 81 (281)
T ss_dssp EEECGGGT-TCCCHHH---HHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEECCEECCSCTTSCHHHHHH
T ss_pred hhhcchhc-cCCCHHH---HHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceEEecccccccCCCHHHHH
Confidence 45566443 3356654 455677889999988877552 34557889999999998876443 22222 1 1
Q ss_pred ------HHH-HHhhh-cCcee--eCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee-CCCC
Q 006566 174 ------VAL-RVAEC-FDKIR--VNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGS 242 (640)
Q Consensus 174 ------~Al-~Aa~~-v~KVR--INPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv-NhGS 242 (640)
-++ .|.+. +..|+ +-||.-. ...+.++++.+.+.++.+.|+++|+.+ ++ ||+.
T Consensus 82 ~~~~~~~~i~~A~~lG~~~v~~~~~p~~~~--------------~~~~~~~~~~~~l~~l~~~a~~~Gv~l--~lE~~~~ 145 (281)
T 3u0h_A 82 ELSLLPDRARLCARLGARSVTAFLWPSMDE--------------EPVRYISQLARRIRQVAVELLPLGMRV--GLEYVGP 145 (281)
T ss_dssp HHHTHHHHHHHHHHTTCCEEEEECCSEESS--------------CHHHHHHHHHHHHHHHHHHHGGGTCEE--EEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeecCCCCC--------------cchhhHHHHHHHHHHHHHHHHHcCCEE--EEEeccc
Confidence 122 23334 77788 3444211 012467788889999999999999765 55 4542
Q ss_pred CcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCC
Q 006566 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (640)
Q Consensus 243 Ls~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn 285 (640)
-..+ ++ +-.++.+.-+..+++++.|-.++-+-+=..+
T Consensus 146 ~~~~----~~--~~~~~~~~~~~~~l~~~v~~~~vg~~~D~~h 182 (281)
T 3u0h_A 146 HHLR----HR--RYPFVQSLADLKTFWEAIGAPNVGALVDSYH 182 (281)
T ss_dssp GGGC----CS--SEECCCSHHHHHHHHHHHCCTTEEEEEEHHH
T ss_pred cccc----cc--cccccCCHHHHHHHHHHcCCCCeeEEeehhH
Confidence 1000 00 0012223345667788888888888775554
No 169
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=83.89 E-value=2.8 Score=42.08 Aligned_cols=54 Identities=15% Similarity=0.328 Sum_probs=39.2
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceee
Q 006566 112 NDTKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVA 166 (640)
Q Consensus 112 t~T~Dv~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVA 166 (640)
..|-+.+..++...++.+.|||||+|++. +.+|.-.|-+...+. +.+.+.|+||
T Consensus 150 ~~tP~~~el~~~~~~~~~~gaDivKia~~a~s~~D~l~ll~~~~~~-~~~~~~P~I~ 205 (257)
T 2yr1_A 150 DGTPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEA-RRELAIPLIT 205 (257)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHH-HHHCSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHhcCCCEEEEEeccCCHHHHHHHHHHHHHH-hccCCCCEEE
Confidence 33445788888999999999999999976 556666666655554 2345688876
No 170
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=83.86 E-value=8.7 Score=40.33 Aligned_cols=108 Identities=17% Similarity=0.285 Sum_probs=69.1
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC-C--HHHHHHHHHHHHHhhcCCCCcceee-ccCCCHHHHHH
Q 006566 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ-G--KREADACFEIKNSLVQKNYNIPLVA-DIHFAPSVALR 177 (640)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp-~--~~~A~~l~~I~~~L~~~g~~iPLVA-DIHF~~~~Al~ 177 (640)
-|+-+.-.+++ .+++..+.++|+++|=|.+. + ..-.+.++.|++. +++|+++ .+ -++..|..
T Consensus 96 ~pvga~ig~~~--------~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~-----~~~~Vivg~v-~t~e~A~~ 161 (361)
T 3khj_A 96 LRVGAAIGVNE--------IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK-----MNIDVIVGNV-VTEEATKE 161 (361)
T ss_dssp CCCEEEECTTC--------HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHH-----CCCEEEEEEE-CSHHHHHH
T ss_pred ceEEEEeCCCH--------HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHh-----cCCcEEEccC-CCHHHHHH
Confidence 45555554432 78899999999999987433 2 2234667777775 5899997 66 57999999
Q ss_pred Hhhh-cCceee--CCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 178 VAEC-FDKIRV--NPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 178 Aa~~-v~KVRI--NPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
++++ +|-|-+ .||.+...+. +...-..+ -+.+..+.+.|++.++||
T Consensus 162 l~~aGaD~I~VG~~~Gs~~~tr~-~~g~g~p~----------~~~i~~v~~~~~~~~iPV 210 (361)
T 3khj_A 162 LIENGADGIKVGIGPGSICTTRI-VAGVGVPQ----------ITAIEKCSSVASKFGIPI 210 (361)
T ss_dssp HHHTTCSEEEECSSCCTTCCHHH-HTCBCCCH----------HHHHHHHHHHHHHHTCCE
T ss_pred HHHcCcCEEEEecCCCcCCCccc-ccCCCCCc----------HHHHHHHHHHHhhcCCeE
Confidence 9999 999987 4765432210 00000000 123455666677788887
No 171
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=83.73 E-value=4.6 Score=40.17 Aligned_cols=94 Identities=20% Similarity=0.319 Sum_probs=61.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCH---------HHH-----------HHHHHHHHHhhcCCC-CcceeeccCCCH-
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGK---------REA-----------DACFEIKNSLVQKNY-NIPLVADIHFAP- 172 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~---------~~A-----------~~l~~I~~~L~~~g~-~iPLVADIHF~~- 172 (640)
-|.+.+++-++.|.++|+|++=+-+|-. ++| +.+-++.+++++. + ++|++.=.-+||
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~-~~~~Pi~~m~y~n~v 106 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKE-FPDIPFLLMTYYNPI 106 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-CTTSCEEEECCHHHH
T ss_pred CChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhh-cCCCCEEEEecCcHH
Confidence 4668899999999999999999998752 222 1122233333333 6 799999445564
Q ss_pred ------HHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 173 ------SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 173 ------~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
+.+..|+++ ++-|=+ |. +. + +...++++.||++|..+
T Consensus 107 ~~~g~~~f~~~~~~aG~dgvii-~d-l~----------------------~-ee~~~~~~~~~~~gl~~ 150 (262)
T 2ekc_A 107 FRIGLEKFCRLSREKGIDGFIV-PD-LP----------------------P-EEAEELKAVMKKYVLSF 150 (262)
T ss_dssp HHHCHHHHHHHHHHTTCCEEEC-TT-CC----------------------H-HHHHHHHHHHHHTTCEE
T ss_pred HHhhHHHHHHHHHHcCCCEEEE-CC-CC----------------------H-HHHHHHHHHHHHcCCcE
Confidence 444566666 776655 21 10 0 23677889999999764
No 172
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=83.71 E-value=2.5 Score=43.70 Aligned_cols=95 Identities=12% Similarity=0.124 Sum_probs=68.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh--cCceeeCCCCC
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC--FDKIRVNPGNF 192 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~--v~KVRINPGN~ 192 (640)
|.+. ++-+++|.+.|.+++===+| ..+.+.+..++++ +++|+++|=.+ ++.-+..+++. ++-|.|.|...
T Consensus 201 ~~~~-~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 273 (375)
T 1r0m_A 201 TLAD-AGRLRQLDEYDLTYIEQPLA-WDDLVDHAELARR-----IRTPLCLDESVASASDARKALALGAGGVINLKVARV 273 (375)
T ss_dssp CGGG-HHHHHTTGGGCCSCEECCSC-TTCSHHHHHHHHH-----CSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTT
T ss_pred CHHH-HHHHHHHHhCCCcEEECCCC-cccHHHHHHHHHh-----CCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchh
Confidence 3444 66666777777777653333 2456677778775 78999999664 67777777654 99999999999
Q ss_pred CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 193 ~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
|.-.. ...+++.|+++|+++=+|-+
T Consensus 274 GGit~----------------------~~~i~~~A~~~g~~~~~~~~ 298 (375)
T 1r0m_A 274 GGHAE----------------------SRRVHDVAQSFGAPVWCGGM 298 (375)
T ss_dssp TSHHH----------------------HHHHHHHHHHTTCCEEECCC
T ss_pred cCHHH----------------------HHHHHHHHHHcCCcEEecCc
Confidence 88442 67899999999999645443
No 173
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=83.67 E-value=1.1 Score=46.27 Aligned_cols=111 Identities=12% Similarity=0.149 Sum_probs=78.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+-+++|=- | ..-|.+.+++-+++|.+.|.+.+==-++ ..+.+.++.++++ +++|+++|=. +++.-+.
T Consensus 181 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 251 (356)
T 3ro6_B 181 LAGRAVVRVDP--N-QSYDRDGLLRLDRLVQELGIEFIEQPFP-AGRTDWLRALPKA-----IRRRIAADESLLGPADAF 251 (356)
T ss_dssp HTTSSEEEEEC--T-TCCCHHHHHHHHHHHHHTTCCCEECCSC-TTCHHHHHTSCHH-----HHHTEEESTTCCSHHHHH
T ss_pred hCCCCEEEEeC--C-CCCCHHHHHHHHHHHHhcCCCEEECCCC-CCcHHHHHHHHhc-----CCCCEEeCCcCCCHHHHH
Confidence 56677777731 1 1235677777778888888877743232 1245666666664 6799999965 4576777
Q ss_pred HHhh---hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 177 RVAE---CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 177 ~Aa~---~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
.+++ .++-|.|.|+..|.-.. ...+...|+++|+++=+|..
T Consensus 252 ~~~~~~~~~d~v~~k~~~~GGit~----------------------~~~i~~~a~~~gi~~~~~~~ 295 (356)
T 3ro6_B 252 ALAAPPAACGIFNIKLMKCGGLAP----------------------ARRIATIAETAGIDLMWGCM 295 (356)
T ss_dssp HHHSSSCSCSEEEECHHHHCSHHH----------------------HHHHHHHHHHHTCEEEECCC
T ss_pred HHHhcCCcCCEEEEcccccCCHHH----------------------HHHHHHHHHHcCCEEEecCC
Confidence 7776 79999999999887432 67889999999999977654
No 174
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=83.46 E-value=6.1 Score=41.25 Aligned_cols=106 Identities=10% Similarity=0.136 Sum_probs=74.9
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC-HHHHHHHHHHHHHhhcCCC-CcceeeccCCCHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG-KREADACFEIKNSLVQKNY-NIPLVADIHFAPSVA 175 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~-~~~A~~l~~I~~~L~~~g~-~iPLVADIHF~~~~A 175 (640)
+|.+-+|+|=- | ..-+.+.+++-+++|.++|.++.=+--|- ..+.+.+++|+++ + ++|+++|=.+++.-+
T Consensus 187 ~G~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~g~~i~~iEqP~~~~~~~~~~~l~~~-----~~~iPIa~dE~~~~~~~ 258 (389)
T 2oz8_A 187 VPAGSKVMIDP--N-EAWTSKEALTKLVAIREAGHDLLWVEDPILRHDHDGLRTLRHA-----VTWTQINSGEYLDLQGK 258 (389)
T ss_dssp SCTTCEEEEEC--T-TCBCHHHHHHHHHHHHHTTCCCSEEESCBCTTCHHHHHHHHHH-----CCSSEEEECTTCCHHHH
T ss_pred hCCCCeEEEEC--C-CCCCHHHHHHHHHHHHhcCCCceEEeCCCCCcCHHHHHHHHhh-----CCCCCEEeCCCCCHHHH
Confidence 57778888721 2 23468888999999999444333334332 2367788888885 6 899999977788888
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
..+++. ++-|.|. |.-. ....++..|+++|+++=+|
T Consensus 259 ~~~i~~~~~d~v~ik----GGit----------------------~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 259 RLLLEAHAADILNVH----GQVT----------------------DVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp HHHHHTTCCSEEEEC----SCHH----------------------HHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHcCCCCEEEEC----cCHH----------------------HHHHHHHHHHHcCCeEeec
Confidence 877765 7877776 3322 2567899999999998666
No 175
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=83.34 E-value=3.9 Score=42.19 Aligned_cols=84 Identities=17% Similarity=0.238 Sum_probs=60.5
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceeeccC--CCHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIH--FAPS 173 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~ 173 (640)
+|| .+=+|.+-.+....+.+..+++++++.+.|...+.+-+- ..++.+.++.|++. -|-++||..|.| |++.
T Consensus 122 lGg-~~~~v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~~~~d~~~v~avR~a---~g~~~~l~vDan~~~~~~ 197 (354)
T 3jva_A 122 LGG-YDNQVITDITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTGIEADIARVKAIREA---VGFDIKLRLDANQAWTPK 197 (354)
T ss_dssp TTC-SCSEEECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHH---HCTTSEEEEECTTCSCHH
T ss_pred hhc-cCCeeeeeEEeCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHHHHH---cCCCCeEEEECCCCCCHH
Confidence 455 333443323334468899999999999999999999873 35778888888875 367899999987 6666
Q ss_pred HHHHHhhhcCce
Q 006566 174 VALRVAECFDKI 185 (640)
Q Consensus 174 ~Al~Aa~~v~KV 185 (640)
-|+..++.+++.
T Consensus 198 ~a~~~~~~L~~~ 209 (354)
T 3jva_A 198 DAVKAIQALADY 209 (354)
T ss_dssp HHHHHHHHTTTS
T ss_pred HHHHHHHHHHhc
Confidence 666666666653
No 176
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=83.02 E-value=34 Score=37.31 Aligned_cols=154 Identities=18% Similarity=0.153 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC----------CHHHHHHHHHHHHHhhcCCCCcceeecc---------CCCH----HH
Q 006566 118 AGTVEEVMRIADQGADLVRITVQ----------GKREADACFEIKNSLVQKNYNIPLVADI---------HFAP----SV 174 (640)
Q Consensus 118 ~atv~Qi~rl~~aGceiVRvtvp----------~~~~A~~l~~I~~~L~~~g~~iPLVADI---------HF~~----~~ 174 (640)
+.-++=+.+|.++|.+.+=+.-| +.++.+.++.|++.+. ++++.+=+ |+.- .-
T Consensus 30 ~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~----~~~l~~l~R~~N~~G~~~~~ddv~~~~ 105 (464)
T 2nx9_A 30 DDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMP----NTPLQMLLRGQNLLGYRHYADDVVDTF 105 (464)
T ss_dssp GGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCS----SSCEEEEECGGGTTSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCC----CCeEEEEeccccccCcccccchhhHHH
Confidence 33344456789999999999865 4677888999998532 34443322 2222 12
Q ss_pred HHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCC
Q 006566 175 ALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253 (640)
Q Consensus 175 Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGd 253 (640)
...|+++ ++-|||- .-.-+ + +.+.+.|+.||++|..++.-+ |-..+. +|
T Consensus 106 v~~a~~~Gvd~i~if-~~~sd----~------------------~ni~~~i~~ak~~G~~v~~~i-~~~~~~----~~-- 155 (464)
T 2nx9_A 106 VERAVKNGMDVFRVF-DAMND----V------------------RNMQQALQAVKKMGAHAQGTL-CYTTSP----VH-- 155 (464)
T ss_dssp HHHHHHTTCCEEEEC-CTTCC----T------------------HHHHHHHHHHHHTTCEEEEEE-ECCCCT----TC--
T ss_pred HHHHHhCCcCEEEEE-EecCH----H------------------HHHHHHHHHHHHCCCEEEEEE-EeeeCC----CC--
Confidence 3356667 8999973 11111 0 246789999999999988655 222211 22
Q ss_pred ChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEEE
Q 006566 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312 (640)
Q Consensus 254 tp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLG 312 (640)
+| +-+++.++-+.+.|-+ .|++|-++=..+=..++.+++.+.++ ++-|||+-
T Consensus 156 ~~----e~~~~~a~~l~~~Gad--~I~l~DT~G~~~P~~v~~lv~~l~~~-~~~~i~~H 207 (464)
T 2nx9_A 156 NL----QTWVDVAQQLAELGVD--SIALKDMAGILTPYAAEELVSTLKKQ-VDVELHLH 207 (464)
T ss_dssp CH----HHHHHHHHHHHHTTCS--EEEEEETTSCCCHHHHHHHHHHHHHH-CCSCEEEE
T ss_pred CH----HHHHHHHHHHHHCCCC--EEEEcCCCCCcCHHHHHHHHHHHHHh-cCCeEEEE
Confidence 44 5566777777888876 68889877555555555666555443 46777653
No 177
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=82.87 E-value=3.6 Score=43.50 Aligned_cols=105 Identities=13% Similarity=0.211 Sum_probs=76.7
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHHHHh
Q 006566 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVA 179 (640)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al~Aa 179 (640)
+.+++|= .| ..-+.+.+++-+++|.+.|.+.+===++ +.+.+..++++ +++|+.+|=. +++.-+..++
T Consensus 212 ~~~l~vD--aN-~~w~~~~A~~~~~~l~~~~i~~iEqP~~---d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~~~i 280 (398)
T 4dye_A 212 GVNLRVD--PN-AAWSVPDSVRAGIALEELDLEYLEDPCV---GIEGMAQVKAK-----VRIPLCTNMCVVRFEDFAPAM 280 (398)
T ss_dssp TSEEEEE--CT-TCSCHHHHHHHHHHHGGGCCSEEECCSS---HHHHHHHHHHH-----CCSCEEESSSCCSGGGHHHHH
T ss_pred CCeEEee--CC-CCCCHHHHHHHHHHHhhcCCCEEcCCCC---CHHHHHHHHhh-----CCCCEEeCCcCCCHHHHHHHH
Confidence 4456553 12 1245677777778888888887754444 77888888885 7899999965 4565555555
Q ss_pred h--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 180 E--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 180 ~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
+ .++-|.|.|+..|.-.. ...+...|+++|+++=+|.
T Consensus 281 ~~~a~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~~~h~ 319 (398)
T 4dye_A 281 RLNAVDVIHGDVYKWGGIAA----------------------TKALAAHCETFGLGMNLHS 319 (398)
T ss_dssp HTTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHHTCEEEECC
T ss_pred HhCCCCEEEeCccccCCHHH----------------------HHHHHHHHHHcCCeEEEcC
Confidence 4 49999999999987442 6779999999999997764
No 178
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=82.81 E-value=1.6 Score=45.47 Aligned_cols=110 Identities=17% Similarity=0.202 Sum_probs=78.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+-+++|=- | ..-|.+.+++-+++|.+.|.+.+==-++ ..+.+.+..++++ +++|+.+|=. +++.-+.
T Consensus 188 ~g~~~~l~vDa--n-~~~~~~~A~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 258 (377)
T 3my9_A 188 FGERIDLRLDF--N-QALTPFGAMKILRDVDAFRPTFIEQPVP-RRHLDAMAGFAAA-----LDTPILADESCFDAVDLM 258 (377)
T ss_dssp HGGGSEEEEEC--T-TCCCTTTHHHHHHHHHTTCCSCEECCSC-TTCHHHHHHHHHH-----CSSCEEESTTCSSHHHHH
T ss_pred hCCCCeEEEeC--C-CCcCHHHHHHHHHHHhhcCCCEEECCCC-ccCHHHHHHHHHh-----CCCCEEECCccCCHHHHH
Confidence 56677777742 2 1234556777788888999888753333 2357778888885 7899999955 4566666
Q ss_pred HHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 177 ~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.+++ .++-|.+.|+..|.-.. ...+...|+++|+++=+|.
T Consensus 259 ~~i~~~~~d~v~~k~~~~GGit~----------------------~~~i~~~a~~~gi~~~~~~ 300 (377)
T 3my9_A 259 EVVRRQAADAISVKIMKCGGLMK----------------------AQSLMAIADTAGLPGYGGT 300 (377)
T ss_dssp HHHHHTCCSEEECCHHHHTSHHH----------------------HHHHHHHHHHHTCCEECCE
T ss_pred HHHHcCCCCEEEecccccCCHHH----------------------HHHHHHHHHHcCCeEecCC
Confidence 6665 39999999999987442 6788999999999984443
No 179
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=82.78 E-value=1.9 Score=42.40 Aligned_cols=68 Identities=13% Similarity=0.184 Sum_probs=50.0
Q ss_pred HHHHHHHHHHcCCCEEEEecC---CH-HHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCc
Q 006566 120 TVEEVMRIADQGADLVRITVQ---GK-READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp---~~-~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~~d 194 (640)
+.+|+..+.++|+|+|=+-+. +. .-.+-++.+++ ..+++++|+| ++.-|..|.+. ++-|-+|.-++.+
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~------~g~~v~~~v~-t~eea~~a~~~Gad~Ig~~~~g~t~ 162 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRL------HGLLAMADCS-TVNEGISCHQKGIEFIGTTLSGYTG 162 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH------TTCEEEEECS-SHHHHHHHHHTTCSEEECTTTTSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHH------CCCEEEEecC-CHHHHHHHHhCCCCEEEecCccCCC
Confidence 578999999999999855432 22 23344455544 3689999999 68888888888 9999888766654
No 180
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=82.70 E-value=4.4 Score=42.30 Aligned_cols=111 Identities=17% Similarity=0.213 Sum_probs=77.2
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+-+++|=- |. .-+.+.+++-+++|.+.|.+.+===+| ..+-+.+.+++++ +++|+.+|=. +++.-+.
T Consensus 190 ~g~~~~l~vDa--N~-~~~~~~A~~~~~~l~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 260 (381)
T 3fcp_A 190 LGDRASIRVDV--NQ-AWDAATGAKGCRELAAMGVDLIEQPVS-AHDNAALVRLSQQ-----IETAILADEAVATAYDGY 260 (381)
T ss_dssp TCTTCEEEEEC--TT-CBCHHHHHHHHHHHHHTTCSEEECCBC-TTCHHHHHHHHHH-----SSSEEEESTTCCSHHHHH
T ss_pred cCCCCeEEEEC--CC-CCCHHHHHHHHHHHhhcCccceeCCCC-cccHHHHHHHHHh-----CCCCEEECCCcCCHHHHH
Confidence 46566666631 11 234667777788888888777642232 2356777788775 7899999965 4455565
Q ss_pred HHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 177 ~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
.+++ .++-|.|.|+..|.-.. ...+...|+++|+++=+|.+
T Consensus 261 ~~~~~~a~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~~~~~~ 303 (381)
T 3fcp_A 261 QLAQQGFTGAYALKIAKAGGPNS----------------------VLALARVAQAAGIGLYGGTM 303 (381)
T ss_dssp HHHHTTCCSEEEECHHHHTSTTH----------------------HHHHHHHHHHHTCEEEECCS
T ss_pred HHHHcCCCCEEEecccccCCHHH----------------------HHHHHHHHHHcCCceecCCC
Confidence 6665 49999999999887443 77899999999999966543
No 181
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=82.55 E-value=3.7 Score=43.76 Aligned_cols=106 Identities=12% Similarity=0.131 Sum_probs=79.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-+|+|=- | .--+.+.+++-+++|.+.|.+.+==-+| ..+.+.+++|+++ +++|+.+|=.+ ++.-+.
T Consensus 219 vG~d~~L~vDa--N-~~~~~~~A~~~~~~Le~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 289 (422)
T 3tji_A 219 YGWKLHILHDV--H-ERLFPQQAVQLAKQLEPFQPYFIEDILP-PQQSAWLEQVRQQ-----SCVPLALGELFNNPAEWH 289 (422)
T ss_dssp HCSSSEEEEEC--T-TCSCHHHHHHHHHHHGGGCCSEEECCSC-GGGGGGHHHHHHH-----CCCCEEECTTCCSGGGTH
T ss_pred cCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhhCCCeEECCCC-hhhHHHHHHHHhh-----CCCCEEEeCCcCCHHHHH
Confidence 57777887732 2 2346788888889999999888864444 2456678888885 88999999554 466666
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
.+++. ++-|.|.|+..|.-.. ...+...|+.+|+++
T Consensus 290 ~ll~~ga~d~v~~k~~~~GGit~----------------------~~kia~lA~a~gv~v 327 (422)
T 3tji_A 290 DLIVNRRIDFIRCHVSQIGGITP----------------------ALKLAHLCQAFGVRL 327 (422)
T ss_dssp HHHHTTCCSEECCCGGGGTSHHH----------------------HHHHHHHHHHTTCEE
T ss_pred HHHhcCCCCEEecCccccCCHHH----------------------HHHHHHHHHHcCCEE
Confidence 66653 9999999999987442 678999999999987
No 182
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=82.15 E-value=5.6 Score=41.71 Aligned_cols=112 Identities=20% Similarity=0.191 Sum_probs=79.6
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH-HHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK-READACFEIKNSLVQKNYNIPLVADIH-FAPSVA 175 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~-~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~A 175 (640)
+|.+.+++|= .| -.-+.+.+++-+++|.+.|..+.=|-=|-. .+.+.+.+++++ +++|+.+|=+ +++.-+
T Consensus 183 ~g~~~~L~vD--aN-~~w~~~~A~~~~~~l~~~~~~l~~iEeP~~~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~ 254 (379)
T 3r0u_A 183 FSKNIKFRFD--AN-QGWNLAQTKQFIEEINKYSLNVEIIEQPVKYYDIKAMAEITKF-----SNIPVVADESVFDAKDA 254 (379)
T ss_dssp CCTTSEEEEE--CT-TCCCHHHHHHHHHHHHTSCCCEEEEECCSCTTCHHHHHHHHHH-----CSSCEEESTTCSSHHHH
T ss_pred cCCCCeEEEe--CC-CCcCHHHHHHHHHHHhhcCCCcEEEECCCCcccHHHHHHHHhc-----CCCCEEeCCccCCHHHH
Confidence 5667777774 22 224577778778888884444444454422 356778888875 8899999955 456666
Q ss_pred HHHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 176 l~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
..+++ .++-|.|.|+..|.-.. ...+...|+++|+++=+|.+
T Consensus 255 ~~~i~~~a~d~v~~k~~~~GGi~~----------------------~~~ia~~A~~~gi~~~~~~~ 298 (379)
T 3r0u_A 255 ERVIDEQACNMINIKLAKTGGILE----------------------AQKIKKLADSAGISCMVGCM 298 (379)
T ss_dssp HHHHHTTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHTTCEEEECCC
T ss_pred HHHHHcCCCCEEEECccccCCHHH----------------------HHHHHHHHHHcCCEEEEeCC
Confidence 66666 48999999998887432 67899999999999977754
No 183
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=81.98 E-value=4.5 Score=39.01 Aligned_cols=88 Identities=16% Similarity=0.157 Sum_probs=68.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCc
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~~d 194 (640)
|.+..++.++++.+.|+.+|=++..+....+.++.+++ -++.+-|+.-++..-+..|++. ++-| ..|+. |
T Consensus 23 ~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~------~~~~~gag~vl~~d~~~~A~~~GAd~v-~~~~~--d 93 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRK------SGLLLGAGTVRSPKEAEAALEAGAAFL-VSPGL--L 93 (207)
T ss_dssp SCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTT------SSCEEEEESCCSHHHHHHHHHHTCSEE-EESSC--C
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhC------CCCEEEeCeEeeHHHHHHHHHcCCCEE-EcCCC--C
Confidence 34456788889999999999999877776666666655 3577888888888888888888 7776 55541 2
Q ss_pred hhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 195 ~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.++++.|+++|+++=+|+
T Consensus 94 --------------------------~~v~~~~~~~g~~~i~G~ 111 (207)
T 2yw3_A 94 --------------------------EEVAALAQARGVPYLPGV 111 (207)
T ss_dssp --------------------------HHHHHHHHHHTCCEEEEE
T ss_pred --------------------------HHHHHHHHHhCCCEEecC
Confidence 358899999999988886
No 184
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=81.90 E-value=17 Score=38.15 Aligned_cols=135 Identities=15% Similarity=0.151 Sum_probs=88.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHHhhcCCCCcceeeccC--CCH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNYNIPLVADIH--FAP 172 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~---~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~ 172 (640)
+||.. =+|.+-.+....+.+..+++++++.+.|...+.+-+-.. ++.+.++.|++.+ + +++|..|-| |++
T Consensus 127 LGg~~-~~v~~~~t~~~~~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v~avR~~~---~-~~~L~vDaN~~w~~ 201 (389)
T 3s5s_A 127 FGGSG-TALTTDITITTGSPERAEEAARRAAAMGFRALKVKVGGRLAASDPARIEAIHAAA---P-GASLILDGNGGLTA 201 (389)
T ss_dssp TTCSC-SEEECCEEECSSCSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHHHHHHHHC---T-TCEEEEECTTCSCH
T ss_pred hCCCC-CceEEEeeecCCCHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHHHHHHHhC---C-CCeEEEECCCCCCH
Confidence 34433 234333333446789999999999999999999987654 7888999999874 2 479999987 455
Q ss_pred HHHHHHhhhc--Cceee-------CCCCCCchhhhcc----------ccccchHHHHHHHhh--------------hHhh
Q 006566 173 SVALRVAECF--DKIRV-------NPGNFADRRAQFE----------QLEYTDDEYQKELQH--------------IEEV 219 (640)
Q Consensus 173 ~~Al~Aa~~v--~KVRI-------NPGN~~d~~k~F~----------~~eYtdeeY~~Ele~--------------I~~~ 219 (640)
.-|+..++.+ ++.+| .|.|+..-++ +. +..||-.++.+-++. | ..
T Consensus 202 ~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~-l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~GGi-t~ 279 (389)
T 3s5s_A 202 GEALALVAHARRLGADVALLEQPVPRDDWDGMKE-VTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMKGGI-AE 279 (389)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSCTTCHHHHHH-HHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHHH-HH
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCCcccHHHHHH-HHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCCCCH-HH
Confidence 6666666667 76664 5666654222 22 223444455543321 2 23
Q ss_pred HHHHHHHHHHcCCeEEEeeC
Q 006566 220 FSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 220 f~~lV~~~Ke~g~aIRIGvN 239 (640)
...+...|+++|+++=+|..
T Consensus 280 ~~~i~~~A~~~gi~~~~~~~ 299 (389)
T 3s5s_A 280 ALDIAAVARAAGLGLMIGGM 299 (389)
T ss_dssp HHHHHHHHHHTTCEEEECCS
T ss_pred HHHHHHHHHHcCCeEEecCC
Confidence 56678999999999977653
No 185
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=81.89 E-value=7.9 Score=39.37 Aligned_cols=119 Identities=12% Similarity=0.151 Sum_probs=80.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCceee-----
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIRV----- 187 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KVRI----- 187 (640)
.+.+..++++.++.+.|..-+.+-+-..++.+.++.|++.+ -++.|..|-| |++.-|...++.+++.+|
T Consensus 131 ~~~e~~~~~a~~~~~~G~~~~KiKvg~~~d~~~v~avr~~~----~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i~~iEq 206 (324)
T 1jpd_X 131 GTPDQMANSASTLWQAGAKLLKVKLDNHLISERMVAIRTAV----PDATLIVDANESWRAEGLAARCQLLADLGVAMLEQ 206 (324)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHC----TTSEEEEECTTCCCSTTHHHHHHHHHHTTCCEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCchHHHHHHHHHHhC----CCCEEEEECcCCCCHHHHHHHHHHHHhCCCCEEEC
Confidence 47789999999999999999999887667788888888863 2689999988 566666665565665554
Q ss_pred --CCCCCCchhhhcc--------ccccchHHHHHHHhhhH------------hhHHHHHHHHHHcCCeEEEee
Q 006566 188 --NPGNFADRRAQFE--------QLEYTDDEYQKELQHIE------------EVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 188 --NPGN~~d~~k~F~--------~~eYtdeeY~~Ele~I~------------~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.|.|+..-. .+. +..+|-+++.+-++... .....+...|+++|+++=+|.
T Consensus 207 P~~~~d~~~~~-~l~~~ipIa~dE~~~~~~~~~~~~~~~~~i~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 278 (324)
T 1jpd_X 207 PLPAQDDAALE-NFIHPLPICADESCHTRSNLKALKGRYEMVNIKLDKTGGLTEALALATEARAQGFSLMLGC 278 (324)
T ss_dssp CSCTTSCGGGG-SSCCSSCEEESTTCSSGGGHHHHBTTBSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCCCCHHHHH-hccCCCCEEEcCCCCCHHHHHHHHhhCCEEEEcchhhCcHHHHHHHHHHHHHcCCcEEEeC
Confidence 566653322 121 11233344444333210 123578888999999987664
No 186
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=81.89 E-value=23 Score=37.32 Aligned_cols=182 Identities=16% Similarity=0.133 Sum_probs=105.2
Q ss_pred eeEEEceeecCCCCceEEEeccCCCCCC---HHHHHHHHHHHHHcCCCEEEEecC--------------CHHHHHHHHHH
Q 006566 89 RTVMVGNVAIGSEHPIRVQTMTTNDTKD---VAGTVEEVMRIADQGADLVRITVQ--------------GKREADACFEI 151 (640)
Q Consensus 89 r~V~VG~v~IGG~~PI~VQSMt~t~T~D---v~atv~Qi~rl~~aGceiVRvtvp--------------~~~~A~~l~~I 151 (640)
..++||++.+ .|.|..-.||.....| ++..++-..+.+.+|-=|.=-+.. +.+..+.++.+
T Consensus 13 ~P~~ig~~~l--~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l 90 (377)
T 2r14_A 13 TPLQLGSLSL--PNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGV 90 (377)
T ss_dssp SCEEETTEEE--SCSEEECCCCCCCCTTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHH
T ss_pred CCeeECCEEe--cCCeEECCCcCCcCCCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCHHHHHHHHHH
Confidence 3588899888 7899999999876544 566677666666555322222211 34556789999
Q ss_pred HHHhhcCCCCc--ce------------------ee--c--------------------cCCCH----------------H
Q 006566 152 KNSLVQKNYNI--PL------------------VA--D--------------------IHFAP----------------S 173 (640)
Q Consensus 152 ~~~L~~~g~~i--PL------------------VA--D--------------------IHF~~----------------~ 173 (640)
.+..++.|..+ -| || + -+-.| +
T Consensus 91 ~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~ 170 (377)
T 2r14_A 91 VEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQ 170 (377)
T ss_dssp HHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHH
Confidence 88777777531 11 11 0 11234 5
Q ss_pred HHHHHhhh-cCceeeCCCCC------CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHh
Q 006566 174 VALRVAEC-FDKIRVNPGNF------ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDR 246 (640)
Q Consensus 174 ~Al~Aa~~-v~KVRINPGN~------~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~r 246 (640)
+|..|.++ +|-|-||-||= -++..+-...+|-- ......+.+.|.++.+.+.+...-+.+||..+.. ...
T Consensus 171 aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVr~avg~~~v~vrls~~~~-~~~- 247 (377)
T 2r14_A 171 AAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGG-SIENRARFPLEVVDAVAEVFGPERVGIRLTPFLE-LFG- 247 (377)
T ss_dssp HHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCC-CTT-
T ss_pred HHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCc-chhhchHHHHHHHHHHHHHcCCCcEEEEeccccc-cCC-
Confidence 66677777 99999998860 00000001122321 1334444555555555555543257777765421 000
Q ss_pred HHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEE
Q 006566 247 IMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSM 281 (640)
Q Consensus 247 il~ryGdtp~gMVeSAle~~~i~e~~~F~diviSm 281 (640)
+ .-|++ .+.+.++++.+++.|.+-|.+|-
T Consensus 248 ~--~~~~~----~~~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 248 L--TDDEP----EAMAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp C--CCSCH----HHHHHHHHHHHHHTTCSEEEEEC
T ss_pred C--CCCCC----HHHHHHHHHHHHHcCCCEEEEeC
Confidence 0 00122 35688999999999998888874
No 187
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=81.82 E-value=9.4 Score=36.47 Aligned_cols=139 Identities=16% Similarity=0.172 Sum_probs=81.8
Q ss_pred HHHHHHHHHcCCCEEEEecCCHH-------HHHHHHHHHHHhhcCCCCcc-eee----ccCC---CHHH-----------
Q 006566 121 VEEVMRIADQGADLVRITVQGKR-------EADACFEIKNSLVQKNYNIP-LVA----DIHF---APSV----------- 174 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~~~-------~A~~l~~I~~~L~~~g~~iP-LVA----DIHF---~~~~----------- 174 (640)
.+.+..++++|++-|-+...+.. +.+.++++++.|.+.|..+. +.. ++.+ ++..
T Consensus 15 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~ 94 (285)
T 1qtw_A 15 ANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDE 94 (285)
T ss_dssp HHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHH
Confidence 34556677889999999543322 23567778888888888742 221 1222 3321
Q ss_pred HHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee-CCCCCcHhHHHHhC
Q 006566 175 ALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYG 252 (640)
Q Consensus 175 Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv-NhGSLs~ril~ryG 252 (640)
...|.+. +..|++.||..... + .+++.++++.+.+.+++ ++++|+ +|++ ||..-. ..++
T Consensus 95 i~~A~~lGa~~v~~~~g~~~~~--------~---~~~~~~~~~~~~l~~l~--a~~~gv--~l~lEn~~~~~----~~~~ 155 (285)
T 1qtw_A 95 MQRCEQLGLSLLNFHPGSHLMQ--------I---SEEDCLARIAESINIAL--DKTQGV--TAVIENTAGQG----SNLG 155 (285)
T ss_dssp HHHHHHTTCCEEEECCCBCTTT--------S---CHHHHHHHHHHHHHHHH--HHCSSC--EEEEECCCCCT----TBCC
T ss_pred HHHHHHcCCCEEEECcCCCCCC--------C---CHHHHHHHHHHHHHHHH--hccCCC--EEEEecCCCCC----Cccc
Confidence 1233444 88899999976431 1 13345667777777775 456775 5565 442110 1123
Q ss_pred CChHHHHHHHHHHHHHHHHC-CCCcEEEEEEeCC
Q 006566 253 DSPRGMVESAFEFARICRKL-DFHNFLFSMKASN 285 (640)
Q Consensus 253 dtp~gMVeSAle~~~i~e~~-~F~diviSmKsSn 285 (640)
.|+ -+..+++++. +-.++-+-+=..+
T Consensus 156 ~~~-------~~~~~l~~~v~~~~~~g~~~D~~H 182 (285)
T 1qtw_A 156 FKF-------EHLAAIIDGVEDKSRVGVCIDTCH 182 (285)
T ss_dssp SSH-------HHHHHHHHHCSCGGGEEEEEEHHH
T ss_pred CCH-------HHHHHHHHhhcCccceEEEEEhHh
Confidence 444 4556788888 7778888776555
No 188
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=81.82 E-value=3.9 Score=42.79 Aligned_cols=111 Identities=17% Similarity=0.218 Sum_probs=77.9
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-+++|= .| ..-+.+.+++-+++|.+.|.+.+===++ ..+-+.+..++++ +++|+++|=.+ ++.-+.
T Consensus 191 ~g~~~~l~vD--aN-~~~~~~~A~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 261 (382)
T 3dgb_A 191 LGDSASVRVD--VN-QAWDEAVALRACRILGGNGIDLIEQPIS-RNNRAGMVRLNAS-----SPAPIMADESIECVEDAF 261 (382)
T ss_dssp HGGGSEEEEE--CT-TCBCHHHHHHHHHHHHTTTCCCEECCBC-TTCHHHHHHHHHH-----CSSCEEESTTCSSHHHHH
T ss_pred cCCCCeEEEe--CC-CCCCHHHHHHHHHHHhhcCcCeeeCCCC-ccCHHHHHHHHHh-----CCCCEEeCCCcCCHHHHH
Confidence 4656677763 22 2235677777788888888777642222 2356777888875 78999999654 466666
Q ss_pred HHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 177 ~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
.+++ .++-|.|.|...|.-.. ...+...|+++|+++=+|..
T Consensus 262 ~~~~~~~~d~v~~k~~~~GGit~----------------------~~~i~~~A~~~gi~~~~~~~ 304 (382)
T 3dgb_A 262 NLAREGAASVFALKIAKNGGPRA----------------------TLRTAAIAEAAGIGLYGGTM 304 (382)
T ss_dssp HHHHHTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHHTCEEEECCS
T ss_pred HHHHcCCCCEEEecccccCCHHH----------------------HHHHHHHHHHcCCeEeecCC
Confidence 6664 49999999999987442 67889999999999865543
No 189
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=81.68 E-value=2.7 Score=41.44 Aligned_cols=68 Identities=15% Similarity=0.170 Sum_probs=49.9
Q ss_pred HHHHHHHHHHcCCCEEEEecC---CH-HHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCc
Q 006566 120 TVEEVMRIADQGADLVRITVQ---GK-READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp---~~-~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~~d 194 (640)
+.+|+..+.++|+|+|=+-+. +. .-.+-++.+++ ..+++++|+| ++..|..|.+. ++-|-+|.-++.+
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~------~g~~v~~~v~-t~eea~~a~~~Gad~Ig~~~~g~t~ 162 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHH------HHLLTMADCS-SVDDGLACQRLGADIIGTTMSGYTT 162 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHH------TTCEEEEECC-SHHHHHHHHHTTCSEEECTTTTSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHH------CCCEEEEeCC-CHHHHHHHHhCCCCEEEEcCccCCC
Confidence 578999999999999855432 22 23344444544 3689999999 68888888888 9999888766654
No 190
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=81.68 E-value=19 Score=37.89 Aligned_cols=120 Identities=14% Similarity=0.193 Sum_probs=80.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCH-----------HHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHh
Q 006566 113 DTKDVAGTVEEVMRIADQGADLVRITVQGK-----------READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVA 179 (640)
Q Consensus 113 ~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~-----------~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa 179 (640)
...+.+..++++++..+.|...+.+-+-.. ++.+.++.|++.+ + +++|..|-| |++.-|+..+
T Consensus 162 ~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~---~-d~~L~vDaN~~w~~~~A~~~~ 237 (393)
T 3u9i_A 162 TTGSVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVA---P-TARLILDGNCGYTAPDALRLL 237 (393)
T ss_dssp C---CHHHHHHHHHHHTTTCCEEEEECC-------CHHHHHHHHHHHHHHHHHS---T-TSEEEEECCSCCCHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHHC---C-CCeEEEEccCCCCHHHHHHHH
Confidence 345779999999999999999999987543 5788888888874 2 479999987 4566666666
Q ss_pred hhc--Cceee-------CCCCCCchhhhcc----------ccccchHHHHHHHhh--------------hHhhHHHHHHH
Q 006566 180 ECF--DKIRV-------NPGNFADRRAQFE----------QLEYTDDEYQKELQH--------------IEEVFSPLVEK 226 (640)
Q Consensus 180 ~~v--~KVRI-------NPGN~~d~~k~F~----------~~eYtdeeY~~Ele~--------------I~~~f~~lV~~ 226 (640)
+.+ +..+| .|.|+..-++ +. +..||-.+|.+-++. | .....+...
T Consensus 238 ~~L~~~~~~i~~iEeP~~~~d~~~~~~-l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k~~~GGi-t~~~~ia~~ 315 (393)
T 3u9i_A 238 DMLGVHGIVPALFEQPVAKDDEEGLRR-LTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMKCGI-VEALDIAAI 315 (393)
T ss_dssp HTTTTTTCCCSEEECCSCTTCTTHHHH-HHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHCH-HHHHHHHHH
T ss_pred HHHhhCCCCeEEEECCCCCCcHHHHHH-HHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEecccccCH-HHHHHHHHH
Confidence 667 66654 5677755322 32 223444555553332 2 335678889
Q ss_pred HHHcCCeEEEee
Q 006566 227 CKKYGRAVRIGT 238 (640)
Q Consensus 227 ~Ke~g~aIRIGv 238 (640)
|+++|+++=+|.
T Consensus 316 A~~~gi~~~~~~ 327 (393)
T 3u9i_A 316 ARTAGLHLMIGG 327 (393)
T ss_dssp HHHHTCEEEECC
T ss_pred HHHcCCeEEecC
Confidence 999999986654
No 191
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=81.60 E-value=1.9 Score=42.64 Aligned_cols=49 Identities=10% Similarity=0.163 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceee
Q 006566 118 AGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVA 166 (640)
Q Consensus 118 ~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVA 166 (640)
+..++...++.+.|||||+|++. +.+|.-.|-+...+....+.+.|+||
T Consensus 128 ~el~~~~~~~~~~gaDivKia~~a~~~~D~l~ll~~~~~~~~~~~~~P~I~ 178 (231)
T 2ocz_A 128 ENLMEAFSEMTKLAPRVVKIAVMPQSEQDVLDLMNYTRGFKTLNPEQEFAT 178 (231)
T ss_dssp TTHHHHHHHHHHTCCSEEEEEECCSSHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHHHHHHHhhccCCCCEEE
Confidence 66677788889999999999976 55777777776666654466789987
No 192
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=81.51 E-value=4 Score=42.68 Aligned_cols=85 Identities=15% Similarity=0.243 Sum_probs=59.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPS 173 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~--~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~ 173 (640)
+||..+=+|..-.+....|.+..++++.++.+.|...+.+-+-. .++.+.++.||+. -|-++||..|.| |++.
T Consensus 127 lGg~~r~~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~G~~~~~d~~~v~avR~a---~g~~~~l~vDan~~~~~~ 203 (378)
T 3eez_A 127 MGGGSRTPRPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGGDVERDIARIRDVEDI---REPGEIVLYDVNRGWTRQ 203 (378)
T ss_dssp TTCCCCSCEEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHTTS---CCTTCEEEEECTTCCCHH
T ss_pred hCCCCCCeEEEEEEecCCCHHHHHHHHHHHHhCCCCEEEeccCCCHHHHHHHHHHHHHH---cCCCceEEEECCCCCCHH
Confidence 46654444444444456788999999999999999999998753 2455566665552 356899999998 6666
Q ss_pred HHHHHhhhcCce
Q 006566 174 VALRVAECFDKI 185 (640)
Q Consensus 174 ~Al~Aa~~v~KV 185 (640)
-|+..++.+++.
T Consensus 204 ~a~~~~~~l~~~ 215 (378)
T 3eez_A 204 QALRVMRATEDL 215 (378)
T ss_dssp HHHHHHHHTGGG
T ss_pred HHHHHHHHhccC
Confidence 666666666654
No 193
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=81.40 E-value=2.7 Score=44.01 Aligned_cols=95 Identities=16% Similarity=0.243 Sum_probs=67.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHHHHhh--hcCceeeCCCCC
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAE--CFDKIRVNPGNF 192 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al~Aa~--~v~KVRINPGN~ 192 (640)
|.+.+++-+++|.+.|.+.+===++ ..+.+.+..+++ .+++|+.+|=. +++.-+..+++ .++-|.|.|+..
T Consensus 204 ~~~~A~~~~~~L~~~~i~~iEqP~~-~~d~~~~~~l~~-----~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~ 277 (385)
T 3i6e_A 204 EIDEAVPRVLDVAQFQPDFIEQPVR-AHHFELMARLRG-----LTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKS 277 (385)
T ss_dssp CGGGHHHHHHHHHTTCCSCEECCSC-TTCHHHHHHHHT-----TCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEECCCC-cccHHHHHHHHH-----hCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeccccc
Confidence 4556667777788888777642222 134566777766 47899999955 45666666664 399999999999
Q ss_pred CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 193 ~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
|.-.. ...+...|+++|+++=+|.
T Consensus 278 GGit~----------------------~~~i~~~A~~~gi~~~~~~ 301 (385)
T 3i6e_A 278 GGLTR----------------------AQTVARIAAAHGLMAYGGD 301 (385)
T ss_dssp TSHHH----------------------HHHHHHHHHHTTCEEEECC
T ss_pred CCHHH----------------------HHHHHHHHHHcCCEEEeCC
Confidence 87432 6779999999999985543
No 194
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=81.32 E-value=3 Score=43.43 Aligned_cols=106 Identities=7% Similarity=0.055 Sum_probs=78.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+.+++|=- | ..-+.+.+++-+++|.+.|.+.+==-++ ..+.+.+..++++ +++|+++|=. +++.-+.
T Consensus 194 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 264 (372)
T 3tj4_A 194 VDSAVRIAIDG--N-GKWDLPTCQRFCAAAKDLDIYWFEEPLW-YDDVTSHARLARN-----TSIPIALGEQLYTVDAFR 264 (372)
T ss_dssp SCTTCEEEEEC--T-TCCCHHHHHHHHHHTTTSCEEEEESCSC-TTCHHHHHHHHHH-----CSSCEEECTTCCSHHHHH
T ss_pred cCCCCcEEeeC--C-CCCCHHHHHHHHHHHhhcCCCEEECCCC-chhHHHHHHHHhh-----cCCCEEeCCCccCHHHHH
Confidence 67778888742 2 2245777888888888888766643233 2456778888885 7899999954 5577777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
.+++. ++-|.|.|+..|.-.. ...+...|+++|+++
T Consensus 265 ~~i~~~~~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~ 302 (372)
T 3tj4_A 265 SFIDAGAVAYVQPDVTRLGGITE----------------------YIQVADLALAHRLPV 302 (372)
T ss_dssp HHHHTTCCSEECCCTTTTTHHHH----------------------HHHHHHHHHHTTCCB
T ss_pred HHHHcCCCCEEEeCccccCCHHH----------------------HHHHHHHHHHcCCEE
Confidence 77654 9999999999987432 678999999999987
No 195
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=81.31 E-value=2.5 Score=44.64 Aligned_cols=99 Identities=14% Similarity=0.058 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHh--hhcCceeeCCCCCC
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA--ECFDKIRVNPGNFA 193 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa--~~v~KVRINPGN~~ 193 (640)
+.+.+++-+++|.+.|.+.+===+| .+.+.+..+++.+++.++++|+.+|=++...-...++ .+++=|++.|.. |
T Consensus 213 ~~~~A~~~~~~L~~~~l~~iEeP~~--~d~~~~~~l~~~~~~~~~~ipIa~gE~~~~~~~~~li~~~a~dii~~d~~~-G 289 (392)
T 3v5c_A 213 NLNLTKEVLAALSDVNLYWLEAAFH--EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATRGRVDVLQYDIIW-P 289 (392)
T ss_dssp CHHHHHHHHHHTTTSCCCEEECSSS--CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHTTSCCEECCBTTT-B
T ss_pred CHHHHHHHHHhcccCCCeEEeCCCC--cCHHHHHHHHHhhccCCCCCcEECCCcccHHHHHHHHHcCCCcEEEeCCCC-C
Confidence 3445555555555555444433244 2566788888877666789999998665533333444 349999999987 6
Q ss_pred chhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 194 d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
.-. ....+...|+++|+++=++.+
T Consensus 290 Git----------------------ea~kia~~A~~~gv~~~~h~~ 313 (392)
T 3v5c_A 290 GFT----------------------HWMELGEKLDAHGLRSAPHCY 313 (392)
T ss_dssp CHH----------------------HHHHHHHHHHHTTCEECCBCC
T ss_pred CHH----------------------HHHHHHHHHHHcCCeEEecCC
Confidence 422 267889999999999966554
No 196
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=81.21 E-value=3.8 Score=41.76 Aligned_cols=143 Identities=12% Similarity=0.170 Sum_probs=88.9
Q ss_pred HHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhh-----cCCC----------------------CcceeeccCCCHHHH
Q 006566 123 EVMRIADQGADLVRITVQGKREADACFEIKNSLV-----QKNY----------------------NIPLVADIHFAPSVA 175 (640)
Q Consensus 123 Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~-----~~g~----------------------~iPLVADIHF~~~~A 175 (640)
+|+++.++|++ .|-+|-.+.++.++.+.+.++ .+|+ ++++++=| =+|...
T Consensus 103 di~~~ld~ga~--~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mI-Et~~av 179 (287)
T 2v5j_A 103 QIKQLLDVGTQ--TLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQI-ETREAM 179 (287)
T ss_dssp HHHHHHHTTCC--EEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEE-CSHHHH
T ss_pred HHHHHHhCCCC--EEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEE-CcHHHH
Confidence 89999999999 566787777777777777654 2333 26666666 445444
Q ss_pred HHHhhh-----cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHH
Q 006566 176 LRVAEC-----FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSY 250 (640)
Q Consensus 176 l~Aa~~-----v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~r 250 (640)
..+-++ +|-|=|-|+.+.-.-. ..|+ .+...+....+.++..|+++|++. |+.
T Consensus 180 ~n~deIaa~~~vD~l~iG~~DLs~~lg----~~~~-----~~~p~v~~a~~~iv~aaraaG~~~--gv~----------- 237 (287)
T 2v5j_A 180 KNLPQILDVEGVDGVFIGPADLSADMG----YAGN-----PQHPEVQAAIEQAIVQIRESGKAP--GIL----------- 237 (287)
T ss_dssp HTHHHHHTSTTEEEEEECHHHHHHHTT----STTC-----CCSHHHHHHHHHHHHHHHHTTSEE--EEE-----------
T ss_pred HHHHHHhCcCCCCEEEECHHHHHHHhC----CCCC-----CCCHHHHHHHHHHHHHHHHcCCee--EEe-----------
Confidence 433222 4455566654432110 0111 011224445677899999999997 662
Q ss_pred hCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHH
Q 006566 251 YGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYV 302 (640)
Q Consensus 251 yGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~ 302 (640)
..+| +.++.+.++||+-+.++ +|...+.++.+.+.+.+.+
T Consensus 238 -~~d~--------~~a~~~~~~G~~~~s~~---~d~~~l~~~~~~~~~~~~~ 277 (287)
T 2v5j_A 238 -IANE--------QLAKRYLELGALFVAVG---VDTTLLARAAEALAARFGA 277 (287)
T ss_dssp -CCCH--------HHHHHHHHTTCSEEEEE---EHHHHHHHHHHHHHHHHHH
T ss_pred -cCCH--------HHHHHHHHhCCCEEEEC---cHHHHHHHHHHHHHHHhhc
Confidence 2234 46777889999876554 4666777888888877654
No 197
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=81.20 E-value=7.2 Score=42.02 Aligned_cols=105 Identities=14% Similarity=0.131 Sum_probs=80.6
Q ss_pred CCHHHHHHHHHH-HHHcCCCEEEEecC-CHHHHHHHHHHHHHhhcCCCCcceeeccCC--CHHHHHHHhhh--cCceeeC
Q 006566 115 KDVAGTVEEVMR-IADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAEC--FDKIRVN 188 (640)
Q Consensus 115 ~Dv~atv~Qi~r-l~~aGceiVRvtvp-~~~~A~~l~~I~~~L~~~g~~iPLVADIHF--~~~~Al~Aa~~--v~KVRIN 188 (640)
.+.+..++-+++ |.+.+ |+=|-=| ..++-+.++.+++++ +.++|+|+|=.| +++-...+++. ++-|.|.
T Consensus 263 ~t~~eai~~~~~ll~~y~--i~~IEdPl~~dD~eg~~~L~~~~---~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iK 337 (428)
T 3tqp_A 263 LTSEEMIDRLTEWTKKYP--VISIEDGLSENDWAGWKLLTERL---ENKVQLVGDDIFVTNPDILEKGIKKNIANAILVK 337 (428)
T ss_dssp BCHHHHHHHHHHHHHHSC--EEEEECCSCTTCHHHHHHHHHHH---TTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC
T ss_pred cCHHHHHHHHHHHHhhcc--cceEeCCCCcccHHHHHHHHHhc---CCCcceeccccccCCHHHHHHHHHhCCCCEEEec
Confidence 466777888887 66666 7766655 345678899998863 457899999655 99888888764 9999999
Q ss_pred CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHh
Q 006566 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDR 246 (640)
Q Consensus 189 PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~r 246 (640)
+..+|.=.. ...+++.|+++|+++=+|-.+|.-++-
T Consensus 338 v~~iGGiTe----------------------alkia~lA~~~G~~~~v~H~sGEted~ 373 (428)
T 3tqp_A 338 LNQIGTLTE----------------------TLATVGLAKSNKYGVIISHRSGETEDT 373 (428)
T ss_dssp HHHHCCHHH----------------------HHHHHHHHHHTTCEEEEECCSBCCSCC
T ss_pred ccccCCHHH----------------------HHHHHHHHHHcCCeEEEeCCCCCchHH
Confidence 999987432 677899999999997788777765443
No 198
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=80.94 E-value=4.6 Score=37.77 Aligned_cols=96 Identities=14% Similarity=0.094 Sum_probs=66.1
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH--HHHHHHHHHHHHhhcCCC-CcceeeccCC-C-HHH-HHHHhhh-cC
Q 006566 111 TNDTKDVAGTVEEVMRIADQGADLVRITVQGK--READACFEIKNSLVQKNY-NIPLVADIHF-A-PSV-ALRVAEC-FD 183 (640)
Q Consensus 111 ~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~--~~A~~l~~I~~~L~~~g~-~iPLVADIHF-~-~~~-Al~Aa~~-v~ 183 (640)
.-|..|.+.+++-++++.+ |++++=+..+-. .-.+.++.|++. + +.|+++|.-+ | |+- +..|+++ ++
T Consensus 6 a~d~~~~~~~~~~~~~~~~-~v~~iev~~~~~~~~g~~~i~~l~~~-----~~~~~i~~~l~~~di~~~~~~~a~~~Gad 79 (207)
T 3ajx_A 6 AIDLLSTEAALELAGKVAE-YVDIIELGTPLIKAEGLSVITAVKKA-----HPDKIVFADMKTMDAGELEADIAFKAGAD 79 (207)
T ss_dssp EECCSCHHHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHH-----STTSEEEEEEEECSCHHHHHHHHHHTTCS
T ss_pred EeCCCCHHHHHHHHHHhhc-cCCEEEECcHHHHhhCHHHHHHHHHh-----CCCCeEEEEEEecCccHHHHHHHHhCCCC
Confidence 3456788999999999988 999988876531 112334444442 4 6899987542 5 444 7888888 88
Q ss_pred ceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 184 KIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 184 KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
-|=+.|+.- + . .+.++++.|+++|..+ |+
T Consensus 80 ~v~vh~~~~-~-~----------------------~~~~~~~~~~~~g~~~--gv 108 (207)
T 3ajx_A 80 LVTVLGSAD-D-S----------------------TIAGAVKAAQAHNKGV--VV 108 (207)
T ss_dssp EEEEETTSC-H-H----------------------HHHHHHHHHHHHTCEE--EE
T ss_pred EEEEeccCC-h-H----------------------HHHHHHHHHHHcCCce--EE
Confidence 887766532 1 1 2567888999998874 77
No 199
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=80.61 E-value=2.5 Score=45.10 Aligned_cols=106 Identities=9% Similarity=0.019 Sum_probs=79.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-||+|= .| .--+.+.+++-+++|.+.|.+.+==-+|. .+.+.+..|++ .+++|+++|=.+ ++.-+.
T Consensus 225 ~G~d~~L~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEeP~~~-~d~~~~~~l~~-----~~~iPIa~dE~~~~~~~~~ 295 (426)
T 4e4f_A 225 FGFNEHLLHD--MH-HRLTPIEAARFGKSVEDYRLFWMEDPTPA-ENQACFRLIRQ-----HTVTPIAVGEVFNSIWDCK 295 (426)
T ss_dssp HTTSSEEEEE--CT-TCSCHHHHHHHHHHTGGGCCSEEECCSCC-SSGGGGHHHHT-----TCCSCEEECTTCCSGGGTH
T ss_pred hCCCCEEEEE--CC-CCCCHHHHHHHHHHHhhcCCCEEECCCCh-HHHHHHHHHHh-----cCCCCEEeCCCcCCHHHHH
Confidence 4667788773 22 23577888888899999999887644442 34566777777 488999999553 566666
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
.+++. ++-|.|.|+..|.-.. ...+...|+++|+++
T Consensus 296 ~~i~~ga~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~v 333 (426)
T 4e4f_A 296 QLIEEQLIDYIRTTITHAGGITG----------------------MRRIADFASLYQVRT 333 (426)
T ss_dssp HHHHTTCCSEECCCTTTTTHHHH----------------------HHHHHHHHHTTTCEE
T ss_pred HHHHcCCCCEEEeCccccCCHHH----------------------HHHHHHHHHHcCCEE
Confidence 66653 9999999999987442 678999999999986
No 200
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=80.48 E-value=4.2 Score=42.05 Aligned_cols=69 Identities=14% Similarity=0.245 Sum_probs=53.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC---------HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhc
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQG---------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECF 182 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~---------~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v 182 (640)
..+.+..+++++++.++|.+.|.+-+-. ..+.+.++.|++.+ |.++||..|.| |++.-|...++.+
T Consensus 147 ~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~---g~d~~l~vDan~~~~~~~a~~~~~~l 223 (382)
T 1rvk_A 147 LATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV---GPDIRLMIDAFHWYSRTDALALGRGL 223 (382)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH---CTTSEEEEECCTTCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHHH
Confidence 3678999999999999999999998653 45677788888753 66899999998 5666666655555
Q ss_pred Cce
Q 006566 183 DKI 185 (640)
Q Consensus 183 ~KV 185 (640)
++.
T Consensus 224 ~~~ 226 (382)
T 1rvk_A 224 EKL 226 (382)
T ss_dssp HTT
T ss_pred Hhc
Confidence 543
No 201
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=80.47 E-value=3.4 Score=42.85 Aligned_cols=110 Identities=12% Similarity=0.127 Sum_probs=78.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+.+++|=- | ..-+.+.+++-+++|.+.|.+++==-++ ..+.+.+..++++ +++|+++|=.+ ++.-+.
T Consensus 182 ~g~~~~l~vDa--n-~~~~~~~a~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 252 (367)
T 3dg3_A 182 FGDAIELYVDG--N-RGWSAAESLRAMREMADLDLLFAEELCP-ADDVLSRRRLVGQ-----LDMPFIADESVPTPADVT 252 (367)
T ss_dssp HGGGSEEEEEC--T-TCSCHHHHHHHHHHTTTSCCSCEESCSC-TTSHHHHHHHHHH-----CSSCEEECTTCSSHHHHH
T ss_pred hCCCCEEEEEC--C-CCCCHHHHHHHHHHHHHhCCCEEECCCC-cccHHHHHHHHHh-----CCCCEEecCCcCCHHHHH
Confidence 46677777731 2 2346777888888899999887642222 2356777888875 78999999654 577676
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
.+++. ++-|.|.|... .-. ....+...|+++|+++=+|.+
T Consensus 253 ~~i~~~~~d~v~~k~~~~-Git----------------------~~~~ia~~A~~~gi~~~~~~~ 294 (367)
T 3dg3_A 253 REVLGGSATAISIKTART-GFT----------------------GSTRVHHLAEGLGLDMVMGNQ 294 (367)
T ss_dssp HHHHHTSCSEEEECHHHH-TTH----------------------HHHHHHHHHHHHTCEEEECCS
T ss_pred HHHHcCCCCEEEeehhhh-hHH----------------------HHHHHHHHHHHcCCeEEECCc
Confidence 66654 89999999887 322 267789999999999977653
No 202
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=80.43 E-value=5 Score=41.91 Aligned_cols=67 Identities=16% Similarity=0.088 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC--CH-HHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCc
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQ--GK-READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDK 184 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp--~~-~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~K 184 (640)
.|.+..++++.++.++|.+.|.+-+- +. .+.+.++.|++. -|.++||..|.| |++.-|...++.+++
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a---~G~~~~l~vDan~~~~~~~a~~~~~~l~~ 215 (389)
T 2oz8_A 144 LDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTC---VPAGSKVMIDPNEAWTSKEALTKLVAIRE 215 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTT---SCTTCEEEEECTTCBCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHh---hCCCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 37899999999999999999999874 33 455677777764 366899999998 566666666666665
No 203
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=80.38 E-value=3.2 Score=39.72 Aligned_cols=163 Identities=10% Similarity=0.108 Sum_probs=95.7
Q ss_pred HHHHHHHHHHcCCCEEEEec------CCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHHHHhhh-cCceeeCCCC
Q 006566 120 TVEEVMRIADQGADLVRITV------QGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAEC-FDKIRVNPGN 191 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtv------p~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al~Aa~~-v~KVRINPGN 191 (640)
.++.++++.++|++.+=+.. +.... +.++.|++. +++|+++.-- .+|.-+..+++. ++.|=+.-..
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~-----~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~ 106 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGK-----LDVQVELSGGIRDDESLAAALATGCARVNVGTAA 106 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHH-----CSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHh-----cCCcEEEECCCCCHHHHHHHHHcCCCEEEECchH
Confidence 46677799999999998864 33334 778888874 7899987533 357778888888 8888765544
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCC------CCCcHhHHHHhCCChHHHHHHHHHH
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH------GSLSDRIMSYYGDSPRGMVESAFEF 265 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNh------GSLs~ril~ryGdtp~gMVeSAle~ 265 (640)
+.+.. .+.+..+++|..+.+|++. |++--| .+-+.. +...|+
T Consensus 107 l~~p~-------------------------~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~---g~~~~~----~~~~e~ 154 (244)
T 2y88_A 107 LENPQ-------------------------WCARVIGEHGDQVAVGLDVQIIDGEHRLRGR---GWETDG----GDLWDV 154 (244)
T ss_dssp HHCHH-------------------------HHHHHHHHHGGGEEEEEEEEEETTEEEEEEG---GGTEEE----EEHHHH
T ss_pred hhChH-------------------------HHHHHHHHcCCCEEEEEeccccCCCCEEEEC---CccCCC----CCHHHH
Confidence 43321 1334444455456666653 122111 000100 034677
Q ss_pred HHHHHHCCCCcEEEEEEeCCh-----hhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHHHHHHHhhh
Q 006566 266 ARICRKLDFHNFLFSMKASNP-----VVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQD 336 (640)
Q Consensus 266 ~~i~e~~~F~diviSmKsSn~-----~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAiGIG~LL~D 336 (640)
++.+++.|+.-|.+.- .+. ....+.++.+.+. .+.|+-- +|=|++.-.+-.++.-
T Consensus 155 ~~~~~~~G~~~i~~~~--~~~~~~~~g~~~~~~~~l~~~-----~~ipvia---------~GGI~~~~d~~~~~~~ 214 (244)
T 2y88_A 155 LERLDSEGCSRFVVTD--ITKDGTLGGPNLDLLAGVADR-----TDAPVIA---------SGGVSSLDDLRAIATL 214 (244)
T ss_dssp HHHHHHTTCCCEEEEE--TTTTTTTSCCCHHHHHHHHTT-----CSSCEEE---------ESCCCSHHHHHHHHTT
T ss_pred HHHHHhCCCCEEEEEe--cCCccccCCCCHHHHHHHHHh-----CCCCEEE---------ECCCCCHHHHHHHHhh
Confidence 7888889998887653 121 1234555555543 5677632 3455665566666554
No 204
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=80.32 E-value=5.7 Score=42.54 Aligned_cols=68 Identities=16% Similarity=0.284 Sum_probs=51.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---------------HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHH
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG---------------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALR 177 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~---------------~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~ 177 (640)
.+.+..++++++..+.|...+++-+-. .++.+.++.||+. -|-++||..|.| |++.-|..
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~a---vG~d~~L~vDan~~~t~~~A~~ 221 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAA---VGDKADLLFGTHGQFTTAGAIR 221 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHH---HTTSSEEEECCCSCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHH---hCCCCeEEEeCCCCCCHHHHHH
Confidence 688999999999999999999996521 2355666777764 367899999998 55666666
Q ss_pred HhhhcCce
Q 006566 178 VAECFDKI 185 (640)
Q Consensus 178 Aa~~v~KV 185 (640)
.++.+++.
T Consensus 222 ~~~~Le~~ 229 (433)
T 3rcy_A 222 LGQAIEPY 229 (433)
T ss_dssp HHHHHGGG
T ss_pred HHHHhhhc
Confidence 66666654
No 205
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=80.21 E-value=5.4 Score=40.03 Aligned_cols=55 Identities=25% Similarity=0.420 Sum_probs=43.0
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEec--CCHHHHHHHHHHHHHhhcCCCCcceee
Q 006566 112 NDTKDVAGTVEEVMRIADQGADLVRITV--QGKREADACFEIKNSLVQKNYNIPLVA 166 (640)
Q Consensus 112 t~T~Dv~atv~Qi~rl~~aGceiVRvtv--p~~~~A~~l~~I~~~L~~~g~~iPLVA 166 (640)
..|-+.+..++.+.++.+.|||||.|++ ++.+|.-.|-+...++++...+.|+||
T Consensus 150 ~~TP~~~el~~~~~~~~~~gaDIvKia~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~ 206 (258)
T 4h3d_A 150 NKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIIT 206 (258)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCSSCBEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEEEEccCCHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 4466677888999999999999999986 577777777777766666666788864
No 206
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=79.96 E-value=23 Score=35.42 Aligned_cols=136 Identities=14% Similarity=0.084 Sum_probs=69.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC-HH-HHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG-KR-EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 191 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~-~~-~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN 191 (640)
.+.+..++++..+.+.|+.-|-++--. .. ..+.+.+|.+.+++.++.+-+-.. ..++..+..-.++ ++.+-++.-.
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g-~l~~e~l~~L~~ag~~~v~i~let 162 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLG-EWPREYYEKWKEAGADRYLLRHET 162 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECC-CCCHHHHHHHHHHTCCEEECCCBC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecC-CCCHHHHHHHHHhCCCEEeeeeee
Confidence 478999999999999999988887433 11 125566666666655433322111 2345555544444 5444332211
Q ss_pred CCchhhhccccccchHHHHHHHh--hhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHH
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQ--HIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARIC 269 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele--~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~ 269 (640)
+ +++-|. .+- +--++..+.++.+++.|+.+.+++--|.- |+|++.+. +.++.+
T Consensus 163 ~------------~~~~~~-~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p--------~et~e~~~----~~~~~l 217 (348)
T 3iix_A 163 A------------NPVLHR-KLRPDTSFENRLNCLLTLKELGYETGAGSMVGLP--------GQTIDDLV----DDLLFL 217 (348)
T ss_dssp S------------CHHHHH-HHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCT--------TCCHHHHH----HHHHHH
T ss_pred C------------CHHHHH-HhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCC--------CCCHHHHH----HHHHHH
Confidence 1 111111 111 11233455566677777766665533331 34554433 344455
Q ss_pred HHCCCCc
Q 006566 270 RKLDFHN 276 (640)
Q Consensus 270 e~~~F~d 276 (640)
++++.+.
T Consensus 218 ~~l~~~~ 224 (348)
T 3iix_A 218 KEHDFDM 224 (348)
T ss_dssp HHHTCSE
T ss_pred HhcCCCE
Confidence 5555443
No 207
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=79.92 E-value=34 Score=35.71 Aligned_cols=210 Identities=16% Similarity=0.185 Sum_probs=124.3
Q ss_pred eEEEceeecCCCCceEEEeccCCCC--CC---HHHHHHHHHHHHHcCCCEE-----EEecC-----------CHHHHHHH
Q 006566 90 TVMVGNVAIGSEHPIRVQTMTTNDT--KD---VAGTVEEVMRIADQGADLV-----RITVQ-----------GKREADAC 148 (640)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T--~D---v~atv~Qi~rl~~aGceiV-----Rvtvp-----------~~~~A~~l 148 (640)
.++||++.+ .|.|..-.||.... .| ++..++...+.+ |+-+| -+.-. +.+..+.+
T Consensus 8 P~~ig~~~l--~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA--g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~ 83 (364)
T 1vyr_A 8 PLKVGAVTA--PNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRA--SAGLIISEATQISAQAKGYAGAPGLHSPEQIAAW 83 (364)
T ss_dssp CEEETTEEE--SSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTT--TSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHH
T ss_pred CeeECCEEE--CCccEECCCCCCcccCCCCCCCHHHHHHHHHHh--cCCEEEEccccccccccCCCCCcccCCHHHHHHH
Confidence 478888888 79999999998653 23 566677666666 55554 22211 34556789
Q ss_pred HHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchh-------------hhc-cccccchHHHHHHHh
Q 006566 149 FEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRR-------------AQF-EQLEYTDDEYQKELQ 214 (640)
Q Consensus 149 ~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~-------------k~F-~~~eYtdeeY~~Ele 214 (640)
+.+.+..++.|. ++++=++-.-+.+......-..--+-|-.+.... ..| .-.+.|.+ |++
T Consensus 84 ~~l~~~vh~~g~--~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~----eI~ 157 (364)
T 1vyr_A 84 KKITAGVHAEDG--RIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELD----EIP 157 (364)
T ss_dssp HHHHHHHHHTTC--CEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGG----GHH
T ss_pred HHHHHHHHhcCC--eEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHH----HHH
Confidence 999888888776 5555553221111100000000011222221100 011 12355555 666
Q ss_pred hhHhhHHHHHHHHHHcCC-eEEEeeCCCCCcHhHH--------HHhCCChHHHHHHHHHHHHHHH-HCCCCcEEEEEEeC
Q 006566 215 HIEEVFSPLVEKCKKYGR-AVRIGTNHGSLSDRIM--------SYYGDSPRGMVESAFEFARICR-KLDFHNFLFSMKAS 284 (640)
Q Consensus 215 ~I~~~f~~lV~~~Ke~g~-aIRIGvNhGSLs~ril--------~ryGdtp~gMVeSAle~~~i~e-~~~F~diviSmKsS 284 (640)
.+.+.|..-.+.|++.|. .|-|=.-||-|=...+ .+||.+.+.=..-++|-++-++ ..|=+ .|++|=|
T Consensus 158 ~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~--~v~vrls 235 (364)
T 1vyr_A 158 GIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD--RIGIRVS 235 (364)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG--GEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC--cEEEEEc
Confidence 777788888888899885 7888666887755554 4688666555555666665443 34433 4666655
Q ss_pred Ch---------hhHHHHHHHHHHHHHHcCCCcceEEE
Q 006566 285 NP---------VVMVQAYRLLVAEMYVHGWDYPLHLG 312 (640)
Q Consensus 285 n~---------~~mV~AyRlL~~~m~~~g~dyPLHLG 312 (640)
-- ....+.+..+++++++.|.+| ||+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~-i~v~ 271 (364)
T 1vyr_A 236 PIGTFQNVDNGPNEEADALYLIEELAKRGIAY-LHMS 271 (364)
T ss_dssp CSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSE-EEEE
T ss_pred cccccccccCCCCCHHHHHHHHHHHHHhCCCE-EEEe
Confidence 31 125667888999999999997 6664
No 208
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=79.91 E-value=3.7 Score=43.28 Aligned_cols=115 Identities=12% Similarity=0.090 Sum_probs=80.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+-+++|=- | ..-+.+.+++-+++|.+.|.+.+==-+| ..+-+.++.++++ +++|+.+|=+ +++.-+.
T Consensus 196 vG~d~~l~vDa--N-~~~~~~~A~~~~~~l~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 266 (388)
T 3tcs_A 196 LGDDVDLLIDA--N-SCYTPDRAIEVGHMLQDHGFCHFEEPCP-YWELAQTKQVTDA-----LDIDVTGGEQDCDLPTWQ 266 (388)
T ss_dssp HCSSSEEEEEC--T-TCCCHHHHHHHHHHHHHTTCCEEECCSC-TTCHHHHHHHHHH-----CSSCEEECTTCCCHHHHH
T ss_pred hCCCCeEEEeC--C-CCcCHHHHHHHHHHHhhcCCeEEECCCC-ccCHHHHHHHHHh-----cCCCEEcCCccCCHHHHH
Confidence 46666666631 1 1235677777788888888877643333 2356778888875 7899999965 4566666
Q ss_pred HHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCC
Q 006566 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (640)
Q Consensus 177 ~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSL 243 (640)
.+++ .++-|.+.|+..|.-.. ...+...|+++|+++=++...+|+
T Consensus 267 ~~i~~~a~d~v~~d~~~~GGit~----------------------a~kia~~A~~~gv~~~~h~~~~~~ 313 (388)
T 3tcs_A 267 RMIDMRAVDIVQPDILYLGGICR----------------------TLRVVEMARAAGLPVTPHCANWSL 313 (388)
T ss_dssp HHHHHTCCSEECCCHHHHTSHHH----------------------HHHHHHHHHHTTCCBCCCCCSTTT
T ss_pred HHHHcCCCCEEEeCccccCCHHH----------------------HHHHHHHHHHcCCEEEecCCCcHH
Confidence 6665 48999999988887442 678999999999998665544443
No 209
>1xfc_A Alanine racemase; alpha-beta barrel, beta-structure for C-terminal domain, INT aldimine form, isomerase; HET: PLP; 1.90A {Mycobacterium tuberculosis}
Probab=79.57 E-value=4.8 Score=41.65 Aligned_cols=144 Identities=17% Similarity=0.202 Sum_probs=72.8
Q ss_pred HHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhcccccc
Q 006566 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204 (640)
Q Consensus 125 ~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eY 204 (640)
+.+.++||+ .+.|-+..||..+. +.|++-|++.=-|..++-...|+++ .+.++ +-+ .
T Consensus 55 ~~l~~~G~~--~~~vas~~Ea~~~~-------~~G~~~~Il~~g~~~~~~~~~~~~~--~i~~~---vds-~-------- 111 (384)
T 1xfc_A 55 QTALGAGAA--ELGVATVDEALALR-------ADGITAPVLAWLHPPGIDFGPALLA--DVQVA---VSS-L-------- 111 (384)
T ss_dssp HHHHHTTCC--EEEESCHHHHHHHH-------HTTCCSCEEECCCCTTCCCHHHHHT--TCEEE---ECS-H--------
T ss_pred HHHHHCCCC--EEEEeEHHHHHHHH-------hcCCCCCEEEEcCCCHHHHHHHHHc--CcEEE---ECC-H--------
Confidence 345678875 57888888887654 2367656553222222222233331 12221 111 1
Q ss_pred chHHHHHHHhhhHhhHHHHHHHHHHcCC--eEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEE---
Q 006566 205 TDDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF--- 279 (640)
Q Consensus 205 tdeeY~~Ele~I~~~f~~lV~~~Ke~g~--aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~divi--- 279 (640)
+ + +..+-+.|++.|. .+.|=+|.| |+|+|-.|.. .+.+.+.++.+.++. ++.+
T Consensus 112 ---~---~-------l~~l~~~a~~~~~~~~V~l~vdtG------~~R~G~~~~~-~~~~~~~~~~i~~~~--~l~l~Gl 169 (384)
T 1xfc_A 112 ---R---Q-------LDELLHAVRRTGRTATVTVKVDTG------LNRNGVGPAQ-FPAMLTALRQAMAED--AVRLRGL 169 (384)
T ss_dssp ---H---H-------HHHHHHHHHHHCCCEEEEEEBCSS------CCSSSBCTTT-HHHHHHHHHHHHHTT--SEEEEEE
T ss_pred ---H---H-------HHHHHHHHHhcCCceEEEEEEECC------CCccCCCcCc-HHHHHHHHHHHHhCC--CCcEEEE
Confidence 1 1 3334445666554 566778888 5889966510 012445555555542 1211
Q ss_pred -----EEEeCCh---hhHHHHHHHHHHHHHHcCCCcc-eEEEe
Q 006566 280 -----SMKASNP---VVMVQAYRLLVAEMYVHGWDYP-LHLGV 313 (640)
Q Consensus 280 -----SmKsSn~---~~mV~AyRlL~~~m~~~g~dyP-LHLGV 313 (640)
|--..+. ....+.++.+++++.+.|++.| +|+|-
T Consensus 170 ~tH~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~~g~ 212 (384)
T 1xfc_A 170 MSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSN 212 (384)
T ss_dssp ECCC-----CCSHHHHHHHHHHHHHHHHHHHTTCCCSEEECBC
T ss_pred EecCCCcCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCeEEEec
Confidence 1111121 2234556667777888888766 57663
No 210
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=79.27 E-value=7.2 Score=40.74 Aligned_cols=85 Identities=9% Similarity=0.083 Sum_probs=59.2
Q ss_pred cCCCCceEEEecc--CCC-CCCHHHHHHHHHHHHHcCCCEEEEecC-C--HHHHHHHHHHHHHhhcCCCCcceeeccC--
Q 006566 98 IGSEHPIRVQTMT--TND-TKDVAGTVEEVMRIADQGADLVRITVQ-G--KREADACFEIKNSLVQKNYNIPLVADIH-- 169 (640)
Q Consensus 98 IGG~~PI~VQSMt--~t~-T~Dv~atv~Qi~rl~~aGceiVRvtvp-~--~~~A~~l~~I~~~L~~~g~~iPLVADIH-- 169 (640)
+||...-+|.+.+ ... ..+.+..++++.++.++|.+.|.|-+- + ..+.+.++.|++. -|.++||..|.|
T Consensus 128 lGg~~~~~vp~~~~g~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a---~G~d~~l~vDan~~ 204 (391)
T 2qgy_A 128 LTKSPKPNVPIYATCWSDLKKDTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREI---VGDELPLMLDLAVP 204 (391)
T ss_dssp HCSSCCSEEEEEEECCCSSCCCHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHH---HCSSSCEEEECCCC
T ss_pred cCCCcCCCcceEEecccCCCCCHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHH---hCCCCEEEEEcCCC
Confidence 4664333444443 222 368899999999999999999998742 2 4567777888775 367899999988
Q ss_pred CCHHHHHHHhhhcCce
Q 006566 170 FAPSVALRVAECFDKI 185 (640)
Q Consensus 170 F~~~~Al~Aa~~v~KV 185 (640)
|++.-|...++.+++.
T Consensus 205 ~~~~~a~~~~~~l~~~ 220 (391)
T 2qgy_A 205 EDLDQTKSFLKEVSSF 220 (391)
T ss_dssp SCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHhc
Confidence 5666666666666554
No 211
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=78.86 E-value=6.5 Score=40.83 Aligned_cols=84 Identities=13% Similarity=0.159 Sum_probs=57.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPS 173 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~--~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~ 173 (640)
+||..+=+|....+..-.|.+..++++.++.++|.+.|.+-+-+ ..+.+.++.|++. -| ++||..|.| |++.
T Consensus 129 lGg~~~~~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a---~g-d~~l~vD~n~~~~~~ 204 (384)
T 2pgw_A 129 LGGAHRKAVGYFYFLQGETAEELARDAAVGHAQGERVFYLKVGRGEKLDLEITAAVRGE---IG-DARLRLDANEGWSVH 204 (384)
T ss_dssp TTCCSSSEEEBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHTT---ST-TCEEEEECTTCCCHH
T ss_pred cCCCCCCceEEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCCCHHHHHHHHHHHHHH---cC-CcEEEEecCCCCCHH
Confidence 46643334444433334688999999999999999999998753 3455677777764 35 899999987 5566
Q ss_pred HHHHHhhhcCce
Q 006566 174 VALRVAECFDKI 185 (640)
Q Consensus 174 ~Al~Aa~~v~KV 185 (640)
-|...++.+++.
T Consensus 205 ~a~~~~~~l~~~ 216 (384)
T 2pgw_A 205 DAINMCRKLEKY 216 (384)
T ss_dssp HHHHHHHHHGGG
T ss_pred HHHHHHHHHHhc
Confidence 565555555554
No 212
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=78.61 E-value=5.3 Score=42.48 Aligned_cols=85 Identities=9% Similarity=0.116 Sum_probs=60.0
Q ss_pred cCCCCceEEEeccCC-CCCCHHHHHHHHHHHHHcCCCEEEEecCC---------HHHHHHHHHHHHHhhcCCCCcceeec
Q 006566 98 IGSEHPIRVQTMTTN-DTKDVAGTVEEVMRIADQGADLVRITVQG---------KREADACFEIKNSLVQKNYNIPLVAD 167 (640)
Q Consensus 98 IGG~~PI~VQSMt~t-~T~Dv~atv~Qi~rl~~aGceiVRvtvp~---------~~~A~~l~~I~~~L~~~g~~iPLVAD 167 (640)
+||...=+|...++. ...|.+..++++++..++|...+.+-+.. .++.+.++.||+. -|-++||..|
T Consensus 160 LGG~~r~~v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avRea---vG~d~~L~vD 236 (412)
T 3stp_A 160 LGGRTKDRIPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREV---IGYDNDLMLE 236 (412)
T ss_dssp HTCCSSSSEEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHH---HCSSSEEEEE
T ss_pred cCCCCCceEEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHH---cCCCCeEEEE
Confidence 566422223333332 23578999999999999999999998743 4667777777774 3678999999
Q ss_pred cC--CCHHHHHHHhhhcCce
Q 006566 168 IH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 168 IH--F~~~~Al~Aa~~v~KV 185 (640)
.| |++.-|+..++.+++.
T Consensus 237 aN~~~~~~~Ai~~~~~Le~~ 256 (412)
T 3stp_A 237 CYMGWNLDYAKRMLPKLAPY 256 (412)
T ss_dssp CTTCSCHHHHHHHHHHHGGG
T ss_pred CCCCCCHHHHHHHHHHHHhc
Confidence 88 5677676666666654
No 213
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=78.57 E-value=4.1 Score=42.07 Aligned_cols=85 Identities=12% Similarity=0.186 Sum_probs=57.2
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPS 173 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~--~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~ 173 (640)
+||..+=+|.+..+..-.|.+..+++++++.++|.+.+.+-+-+ ..+.+.++.|++. -|.++||..|.| |++.
T Consensus 128 lGg~~~~~vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a---~g~~~~l~vDan~~~~~~ 204 (371)
T 2ps2_A 128 LGGRTNTRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISGEPVTDAKRITAALAN---QQPDEFFIVDANGKLSVE 204 (371)
T ss_dssp TTCCCSSCEEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCSCHHHHHHHHHHHTTT---CCTTCEEEEECTTBCCHH
T ss_pred hCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecCCCHHHHHHHHHHHHHh---cCCCCEEEEECCCCcCHH
Confidence 35533223333333333578999999999999999999997743 3344555555543 466899999988 6666
Q ss_pred HHHHHhhhc-Cce
Q 006566 174 VALRVAECF-DKI 185 (640)
Q Consensus 174 ~Al~Aa~~v-~KV 185 (640)
-|...++.+ ++.
T Consensus 205 ~a~~~~~~l~~~~ 217 (371)
T 2ps2_A 205 TALRLLRLLPHGL 217 (371)
T ss_dssp HHHHHHHHSCTTC
T ss_pred HHHHHHHHHHhhc
Confidence 666666666 664
No 214
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=78.54 E-value=8.1 Score=39.94 Aligned_cols=106 Identities=13% Similarity=0.150 Sum_probs=73.1
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (640)
+|.+-+|+|=- |. .-|.+.+++-+++|.+.|-+.+===++ ..+-+.+++++++ +++|+.+|=+.. +.-+.
T Consensus 185 ~g~~~~l~vDa--N~-~~~~~~A~~~~~~l~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 255 (378)
T 4hpn_A 185 IGPDMRLMIDA--NH-GYTVTEAITLGDRAAGFGIDWFEEPVV-PEQLDAYARVRAG-----QPIPVAGGETWHGRYGMW 255 (378)
T ss_dssp HTTTSEEEEEC--TT-CCCHHHHHHHHHHHGGGCCSCEECCSC-TTCHHHHHHHHHH-----SSSCEEECTTCCHHHHHH
T ss_pred cCCcEEEEEec--Cc-ccCHHHHHHHHhhhhhcccchhhcCCC-ccchhhhHHHHhh-----CCceeeCCcCccchHhHH
Confidence 46666666632 11 235677777777777777665432222 2356777888875 899999997654 44455
Q ss_pred HHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 177 ~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
.+++ +++=|.+.|+..|.-.. ...+...|+++|+++
T Consensus 256 ~~i~~~a~d~i~~d~~~~GGit~----------------------~~~ia~~A~~~gi~v 293 (378)
T 4hpn_A 256 QALSAGAVDILQPDLCGCGGFSE----------------------IQKIATLATLHGVRI 293 (378)
T ss_dssp HHHHTTCCSEECCBTTTTTHHHH----------------------HHHHHHHHHHHTCEE
T ss_pred HHHHcCCCCEEeeCCeeCCChhH----------------------HHHHHHHHHHcCCeE
Confidence 5554 49999999999987442 678899999999987
No 215
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=78.48 E-value=4.5 Score=43.37 Aligned_cols=106 Identities=7% Similarity=0.017 Sum_probs=76.1
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+.+|+|= .| ..-|.+.+++-+++|.+.|.+.+==-+| ..+.+.+..|+++ +++|+.+|=. +++.-+.
T Consensus 237 ~G~d~~L~vD--aN-~~~~~~~A~~~~~~L~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 307 (440)
T 3t6c_A 237 LGFSVELLHD--AH-ERITPINAIHMAKALEPYQLFFLEDPVA-PENTEWLKMLRQQ-----SSTPIAMGELFVNVNEWK 307 (440)
T ss_dssp HCSSSEEEEE--CT-TCSCHHHHHHHHHHTGGGCCSEEECSSC-GGGGGGHHHHHHH-----CCSCEEECTTCCSHHHHH
T ss_pred cCCCCeEEEE--CC-CCCCHHHHHHHHHHhhhcCCCEEECCCC-hhhHHHHHHHHhh-----cCCCEEeCcccCCHHHHH
Confidence 4555566653 11 2235677777778888888887754343 2356667788875 8899999954 4577777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
.+++. ++-|.|.|+..|.-.. ...+...|+++|+++
T Consensus 308 ~~i~~~a~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~ 345 (440)
T 3t6c_A 308 PLIDNKLIDYIRCHISSIGGITP----------------------AKKIAIYSELNGVRT 345 (440)
T ss_dssp HHHHTTCCSEECCCGGGGTSHHH----------------------HHHHHHHHHHTTCEE
T ss_pred HHHHcCCccceeechhhhCCHHH----------------------HHHHHHHHHHcCCEE
Confidence 77654 9999999999987442 678999999999987
No 216
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=78.43 E-value=9.9 Score=36.37 Aligned_cols=130 Identities=12% Similarity=0.099 Sum_probs=75.4
Q ss_pred HHHHHHHHHcCCCEEEEecCCHH-------HHHHHHHHHHHhhcCCC-Ccceeec--cCC--CHHH----------H-HH
Q 006566 121 VEEVMRIADQGADLVRITVQGKR-------EADACFEIKNSLVQKNY-NIPLVAD--IHF--APSV----------A-LR 177 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~~~-------~A~~l~~I~~~L~~~g~-~iPLVAD--IHF--~~~~----------A-l~ 177 (640)
.+.+..+.++|++-|-+-..+.. ..+.++++++.+.+.|. .+-+-+. +.+ ++.. + ..
T Consensus 17 ~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~~~i~~ 96 (270)
T 3aam_A 17 AGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVNLGAEGELWEKSVASLADDLEK 96 (270)
T ss_dssp HHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCCTTCSSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 34456667789999988653321 13566677777777777 4333232 212 3321 1 23
Q ss_pred Hhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHH-HcCCeEEEeeCC-CCCcHhHHHHhCCC
Q 006566 178 VAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCK-KYGRAVRIGTNH-GSLSDRIMSYYGDS 254 (640)
Q Consensus 178 Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~K-e~g~aIRIGvNh-GSLs~ril~ryGdt 254 (640)
|.+. +..|.+.||.. +. +++.+.+.++++.|+ ++|+.+-|= |+ |.- ..++.|
T Consensus 97 a~~lGa~~vv~h~g~~-~~------------------~~~~~~l~~l~~~a~~~~gv~l~lE-n~~~~~-----~~~~~~ 151 (270)
T 3aam_A 97 AALLGVEYVVVHPGSG-RP------------------ERVKEGALKALRLAGVRSRPVLLVE-NTAGGG-----EKVGAR 151 (270)
T ss_dssp HHHHTCCEEEECCCBS-CH------------------HHHHHHHHHHHHHHTCCSSSEEEEE-CCCCCT-----TBSCCS
T ss_pred HHHcCCCEEEECCCCC-CH------------------HHHHHHHHHHHHhhcccCCCEEEEe-cCCCCC-----CccCCC
Confidence 3344 78899999976 21 567788899999998 888755443 33 210 112334
Q ss_pred hHHHHHHHHHHHHHHHHCCCCcEEEEEEeCC
Q 006566 255 PRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (640)
Q Consensus 255 p~gMVeSAle~~~i~e~~~F~diviSmKsSn 285 (640)
+ -+..+++++. ++-+-+=..+
T Consensus 152 ~-------~~~~~l~~~v---~vg~~lD~~H 172 (270)
T 3aam_A 152 F-------EELAWLVADT---PLQVCLDTCH 172 (270)
T ss_dssp H-------HHHHHHHTTS---SCEEEEEHHH
T ss_pred H-------HHHHHHHHhC---CEEEEEehhh
Confidence 4 3455666665 5556554444
No 217
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=78.37 E-value=7.5 Score=40.77 Aligned_cols=106 Identities=12% Similarity=0.158 Sum_probs=78.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (640)
+|.+-+++|=- | ..-+.+.+++-+++|.+.|.+++==-+|- .+-+.+..++++ +++|+.+|=.+. +.-+.
T Consensus 210 ~G~~~~l~vDa--N-~~~~~~~A~~~~~~l~~~~i~~iEeP~~~-~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 280 (383)
T 3toy_A 210 LGPDIALMLDF--N-QSLDPAEATRRIARLADYDLTWIEEPVPQ-ENLSGHAAVRER-----SEIPIQAGENWWFPRGFA 280 (383)
T ss_dssp HCTTSEEEEEC--T-TCSCHHHHHHHHHHHGGGCCSEEECCSCT-TCHHHHHHHHHH-----CSSCEEECTTCCHHHHHH
T ss_pred hCCCCeEEEeC--C-CCCCHHHHHHHHHHHHhhCCCEEECCCCc-chHHHHHHHHhh-----cCCCEEeCCCcCCHHHHH
Confidence 57777887742 2 23457788888889999998887533331 346677888875 789999996654 66666
Q ss_pred HHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 177 ~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
.+++ .++-|.|.|+..|.-.. ...+...|+++|+++
T Consensus 281 ~~i~~~a~d~v~ik~~~~GGit~----------------------~~~ia~~A~~~gi~~ 318 (383)
T 3toy_A 281 EAIAAGASDFIMPDLMKVGGITG----------------------WLNVAGQADAASIPM 318 (383)
T ss_dssp HHHHHTCCSEECCCTTTTTHHHH----------------------HHHHHHHHHHHTCCB
T ss_pred HHHHcCCCCEEEeCccccCCHHH----------------------HHHHHHHHHHcCCEE
Confidence 6664 49999999999987442 678999999999987
No 218
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=78.32 E-value=6.3 Score=41.76 Aligned_cols=68 Identities=12% Similarity=0.159 Sum_probs=51.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC------------HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHh
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQG------------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVA 179 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~------------~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa 179 (640)
-.+.+..+++++++.+.|...+.+ +-. .++.+.++.||+. -|-++||..|.| |++.-|+..+
T Consensus 123 ~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~~~~~~~~~d~e~v~avR~a---vG~d~~L~vDaN~~~~~~~A~~~~ 198 (405)
T 3rr1_A 123 GDRPADVIAGMKALQAGGFDHFKL-NGCEEMGIIDTSRAVDAAVARVAEIRSA---FGNTVEFGLDFHGRVSAPMAKVLI 198 (405)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCBCSHHHHHHHHHHHHHHHHT---TGGGSEEEEECCSCBCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccccccchhHHHHHHHHHHHHHH---hCCCceEEEECCCCCCHHHHHHHH
Confidence 456899999999999999999999 433 2456677777764 356899999998 5676676666
Q ss_pred hhcCce
Q 006566 180 ECFDKI 185 (640)
Q Consensus 180 ~~v~KV 185 (640)
+.+++.
T Consensus 199 ~~L~~~ 204 (405)
T 3rr1_A 199 KELEPY 204 (405)
T ss_dssp HHHGGG
T ss_pred HHHHhc
Confidence 666654
No 219
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=78.29 E-value=4.7 Score=42.79 Aligned_cols=85 Identities=19% Similarity=0.289 Sum_probs=58.2
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC-------------------------C----------H
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ-------------------------G----------K 142 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp-------------------------~----------~ 142 (640)
+||..+=+|..-++....|.+..++++++..+.|...+.+-+- + .
T Consensus 125 LGG~~r~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 204 (418)
T 3r4e_A 125 LGGRSRDGIMVYGHANGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALN 204 (418)
T ss_dssp HTCCSCSSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHH
T ss_pred hCCccCCeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHH
Confidence 5664322222222333467899999999999999999998652 1 2
Q ss_pred HHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 143 READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 143 ~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
++.+.++.||+. -|-++||..|.| |++.-|+..++.+++.
T Consensus 205 ~d~~~v~avR~a---~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~ 246 (418)
T 3r4e_A 205 YVPKLFEELRKT---YGFDHHLLHDGHHRYTPQEAANLGKMLEPY 246 (418)
T ss_dssp HHHHHHHHHHHH---HCSSSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHH---cCCCCeEEEeCCCCCCHHHHHHHHHHHHhh
Confidence 356667777764 367899999998 6677777766666654
No 220
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=78.23 E-value=2.8 Score=44.18 Aligned_cols=106 Identities=10% Similarity=0.100 Sum_probs=76.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+.||+|= .| .--+.+.+++-+++|.+.|.+.+==-+| ..+.+.+..|++ .+++|+.+|=. +++.-+.
T Consensus 198 ~G~d~~l~vD--an-~~~~~~~A~~~~~~L~~~~i~~iEqP~~-~~~~~~~~~l~~-----~~~iPIa~dE~~~~~~~~~ 268 (401)
T 3sbf_A 198 YGNQFHILHD--VH-ERLFPNQAIQFAKEVEQYKPYFIEDILP-PNQTEWLDNIRS-----QSSVSLGLGELFNNPEEWK 268 (401)
T ss_dssp HTTSSEEEEE--CT-TCSCHHHHHHHHHHHGGGCCSCEECSSC-TTCGGGHHHHHT-----TCCCCEEECTTCCSHHHHH
T ss_pred cCCCCEEEEE--CC-CCCCHHHHHHHHHHHHhcCCCEEECCCC-hhHHHHHHHHHh-----hCCCCEEeCCccCCHHHHH
Confidence 4566677663 12 2346777777788888888887754343 134556677776 48899999955 4577777
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
.+++. ++-|.|.|+..|.-.. ...+...|+++|+++
T Consensus 269 ~~i~~~~~d~v~~k~~~~GGit~----------------------~~kia~~A~~~gi~~ 306 (401)
T 3sbf_A 269 SLIANRRIDFIRCHVSQIGGITP----------------------ALKLGHLCQNFGVRI 306 (401)
T ss_dssp HHHHTTCCSEECCCGGGGTSHHH----------------------HHHHHHHHHHHTCEE
T ss_pred HHHhcCCCCEEecCccccCCHHH----------------------HHHHHHHHHHcCCEE
Confidence 77754 9999999999987442 678999999999987
No 221
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=78.13 E-value=5.5 Score=41.81 Aligned_cols=111 Identities=10% Similarity=0.199 Sum_probs=81.9
Q ss_pred cCCCCceE-EEeccCCCCCCHHHHHHHHHHHHHcCC--CEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHH
Q 006566 98 IGSEHPIR-VQTMTTNDTKDVAGTVEEVMRIADQGA--DLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSV 174 (640)
Q Consensus 98 IGG~~PI~-VQSMt~t~T~Dv~atv~Qi~rl~~aGc--eiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~ 174 (640)
+|.+-+|+ |=- | ..-|.+.+++-+++|.+.|. +.+==-++ ..+.+.++.|+++ +++|+ ----+++.-
T Consensus 183 ~g~~~~l~~vDa--n-~~~~~~~A~~~~~~l~~~~i~~~~iEqP~~-~~d~~~~~~l~~~-----~~iPI-dE~~~~~~~ 252 (391)
T 3gd6_A 183 FGSRVRIKSYDF--S-HLLNWKDAHRAIKRLTKYDLGLEMIESPAP-RNDFDGLYQLRLK-----TDYPI-SEHVWSFKQ 252 (391)
T ss_dssp HGGGCEEEEEEC--T-TCSCHHHHHHHHHHHTTCCSSCCEEECCSC-TTCHHHHHHHHHH-----CSSCE-EEECCCHHH
T ss_pred cCCCCcEEEecC--C-CCcCHHHHHHHHHHHHhcCCCcceecCCCC-hhhHHHHHHHHHH-----cCCCc-CCCCCCHHH
Confidence 46677787 632 2 23467888888899999998 76643232 2357788888885 78999 445577888
Q ss_pred HHHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCC
Q 006566 175 ALRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (640)
Q Consensus 175 Al~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNh 240 (640)
+..+++. ++-|.|.|+..|.-.. ...+...|+++|+++=+|.+.
T Consensus 253 ~~~~~~~~~~d~v~~k~~~~GGit~----------------------~~~ia~~A~~~gi~~~~~~~~ 298 (391)
T 3gd6_A 253 QQEMIKKDAIDIFNISPVFIGGLTS----------------------AKKAAYAAEVASKDVVLGTTQ 298 (391)
T ss_dssp HHHHHHHTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECchhcCCHHH----------------------HHHHHHHHHHcCCEEEecCCC
Confidence 8777754 9999999999987443 678999999999999776543
No 222
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=78.12 E-value=7 Score=37.34 Aligned_cols=108 Identities=13% Similarity=0.149 Sum_probs=64.9
Q ss_pred EEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEec------CCHHH-HHHHHHHHHHhhcCCCCcceeeccCCCH--HHH
Q 006566 105 RVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV------QGKRE-ADACFEIKNSLVQKNYNIPLVADIHFAP--SVA 175 (640)
Q Consensus 105 ~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtv------p~~~~-A~~l~~I~~~L~~~g~~iPLVADIHF~~--~~A 175 (640)
-+-|++..|. ....+++..+.++|++++-+.+ |+.+. .+.+++|++ . ++.|+.++.=+|+ +.+
T Consensus 13 i~p~i~a~d~---~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~----~-~~~~~~v~l~vnd~~~~v 84 (230)
T 1rpx_A 13 VSPSILSANF---SKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRP----I-TDLPLDVHLMIVEPDQRV 84 (230)
T ss_dssp EEEBGGGSCG---GGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGG----G-CCSCEEEEEESSSHHHHH
T ss_pred EEEEeecCCH---HHHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHh----c-cCCcEEEEEEecCHHHHH
Confidence 4567777664 4566778888999999998873 55431 233344443 2 4678888766664 356
Q ss_pred HHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCC
Q 006566 176 LRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (640)
Q Consensus 176 l~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSL 243 (640)
..|+++ ++-|=+ ++...... ...++++.|+++|..+=+-+|.++-
T Consensus 85 ~~~~~~Gad~v~v-h~~~~~~~----------------------~~~~~~~~~~~~g~~ig~~~~p~t~ 130 (230)
T 1rpx_A 85 PDFIKAGADIVSV-HCEQSSTI----------------------HLHRTINQIKSLGAKAGVVLNPGTP 130 (230)
T ss_dssp HHHHHTTCSEEEE-ECSTTTCS----------------------CHHHHHHHHHHTTSEEEEEECTTCC
T ss_pred HHHHHcCCCEEEE-EecCccch----------------------hHHHHHHHHHHcCCcEEEEeCCCCC
Confidence 666666 777732 33310101 1456788899988665444543443
No 223
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=77.94 E-value=16 Score=39.77 Aligned_cols=104 Identities=14% Similarity=0.182 Sum_probs=79.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC-CHHHHHHHHHHHHHhhcCCCCcceeeccCC--CHHHHHHHhhh--cCceeeCC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAEC--FDKIRVNP 189 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp-~~~~A~~l~~I~~~L~~~g~~iPLVADIHF--~~~~Al~Aa~~--v~KVRINP 189 (640)
.+.+..++-.+++.+. ..|+-|-=| ..++-+.++.+++++ + ++|+|+|=.| ||+.+..+++. ++.|.|-+
T Consensus 279 ~t~~elid~y~~lle~-ypI~~IEDPl~~dD~eg~a~Lt~~l---g-~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKv 353 (441)
T 3qtp_A 279 KDVDGLIAEYVDYGKH-YPIASIEDPFAEDDWAAWNKFTVEH---G-NFQIVGDDLLVTNPARVQMAMDKNACNSVLIKV 353 (441)
T ss_dssp ECHHHHHHHHHHHHHH-SCEEEEESCSCTTCHHHHHHHHHHT---T-TSEEEESTTTTTCHHHHHHHHHHTCCSEEEECG
T ss_pred cCHHHHHHHHHHHhhh-cceeeecCCCChHHHHHHHHHHHhc---C-CceEEeccccccCHHHHHHHHHcCCCCEEEecc
Confidence 3567777777775543 348888655 456789999999974 3 6999999655 89999888875 99999999
Q ss_pred CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcH
Q 006566 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245 (640)
Q Consensus 190 GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ 245 (640)
..+|.-.. ..++++.|+.+|+.+=+|-.+|--++
T Consensus 354 nqiGGITE----------------------alkaa~lA~~~G~~vmvsHrsgETeD 387 (441)
T 3qtp_A 354 NQIGTLTE----------------------TFKTIKMAQEKGWGVMASHRSGETED 387 (441)
T ss_dssp GGTCCHHH----------------------HHHHHHHHHHTTCEEEEECCSSCCSC
T ss_pred cccccHHH----------------------HHHHHHHHHHcCCeEEEeCCCCCccH
Confidence 99998432 56788999999998877766654433
No 224
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=77.87 E-value=12 Score=38.86 Aligned_cols=214 Identities=15% Similarity=0.130 Sum_probs=133.0
Q ss_pred eEEEceeecCCCCceEEEeccCCCCCC---HHHHHHHHHHHHHcCCCEEEEe----------------cCCHHHHHHHHH
Q 006566 90 TVMVGNVAIGSEHPIRVQTMTTNDTKD---VAGTVEEVMRIADQGADLVRIT----------------VQGKREADACFE 150 (640)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T~D---v~atv~Qi~rl~~aGceiVRvt----------------vp~~~~A~~l~~ 150 (640)
.++||++.+ .|-|..-.||+....| ++..++--.+.++-|+-+|=.- .-+.+..+.+++
T Consensus 7 P~~ig~~~l--~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~ 84 (363)
T 3l5l_A 7 PYTLKDVTL--RNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQAFVP 84 (363)
T ss_dssp CEEETTEEE--SSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHHHHHH
T ss_pred CeeECCEEe--eCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHHHHHH
Confidence 477888887 7899999998754433 4566666677777777666321 124567889999
Q ss_pred HHHHhhcCCCCcceeeccCCCHHHHHHHhhh-----c-----Cc-eeeCCCCCCchhhhc-cccccchHHHHHHHhhhHh
Q 006566 151 IKNSLVQKNYNIPLVADIHFAPSVALRVAEC-----F-----DK-IRVNPGNFADRRAQF-EQLEYTDDEYQKELQHIEE 218 (640)
Q Consensus 151 I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-----v-----~K-VRINPGN~~d~~k~F-~~~eYtdeeY~~Ele~I~~ 218 (640)
|.+..++.|..+ ++=++-.-+.+.....+ + .. --+-|-.+......+ .-.+.|. +|++.|.+
T Consensus 85 ~~~~vh~~G~~i--~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt~----~eI~~ii~ 158 (363)
T 3l5l_A 85 VVQAIKAAGSVP--GIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTL----DDIARVKQ 158 (363)
T ss_dssp HHHHHHHTTCEE--EEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECCH----HHHHHHHH
T ss_pred HHHHHHhcCCEE--EEEeccCCccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCCH----HHHHHHHH
Confidence 999999988753 33333222222100000 0 00 012333332211001 1234453 57778888
Q ss_pred hHHHHHHHHHHcCC-eEEEeeCCCCCcHhHHH--------HhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCCh---
Q 006566 219 VFSPLVEKCKKYGR-AVRIGTNHGSLSDRIMS--------YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP--- 286 (640)
Q Consensus 219 ~f~~lV~~~Ke~g~-aIRIGvNhGSLs~ril~--------ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~--- 286 (640)
.|..-.+.|++.|- .|-|=.-||-|-+.+++ +||.+.+.=..-++|-++-+++.==.++.|++|-|-.
T Consensus 159 ~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~ 238 (363)
T 3l5l_A 159 DFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYD 238 (363)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcC
Confidence 89999999999884 46666678888666555 5887776666667777776665411355677776621
Q ss_pred --h-hHHHHHHHHHHHHHHcCCCcceEEE
Q 006566 287 --V-VMVQAYRLLVAEMYVHGWDYPLHLG 312 (640)
Q Consensus 287 --~-~mV~AyRlL~~~m~~~g~dyPLHLG 312 (640)
- ...+.+..++++|++.|.+| ||+.
T Consensus 239 ~~G~~~~~~~~~la~~L~~~Gvd~-i~vs 266 (363)
T 3l5l_A 239 GRDEQTLEESIELARRFKAGGLDL-LSVS 266 (363)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCCE-EEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCE-EEEe
Confidence 1 45778888999999999997 6654
No 225
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=77.84 E-value=42 Score=37.33 Aligned_cols=152 Identities=13% Similarity=0.074 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecC----------CHHHHHHHHHHHHHhhcCCCCcceeecc---------CCC----HH
Q 006566 117 VAGTVEEVMRIADQGADLVRITVQ----------GKREADACFEIKNSLVQKNYNIPLVADI---------HFA----PS 173 (640)
Q Consensus 117 v~atv~Qi~rl~~aGceiVRvtvp----------~~~~A~~l~~I~~~L~~~g~~iPLVADI---------HF~----~~ 173 (640)
++.-++=+.+|.++|.+.|=+.-| +.++.+.++.|++.+. ++++.+=+ |+. -+
T Consensus 46 tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~----~~~l~~L~R~~N~~G~~~ypddv~~~ 121 (539)
T 1rqb_A 46 MEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMP----NSRLQMLLRGQNLLGYRHYNDEVVDR 121 (539)
T ss_dssp GGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCT----TSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCC----CCEEEEEeccccccCcccCcccccHH
Confidence 344455567788899999999876 5578888999998532 34443322 221 22
Q ss_pred HHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee--CCCCCcHhHHHH
Q 006566 174 VALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT--NHGSLSDRIMSY 250 (640)
Q Consensus 174 ~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv--NhGSLs~ril~r 250 (640)
-...|+++ ++-|||- ..-.. + +.+.+.++.||++|..++.-+ -.|+ +
T Consensus 122 ~ve~a~~aGvd~vrIf----~s~sd-~------------------~ni~~~i~~ak~~G~~v~~~i~~~~~~-------~ 171 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVF----DAMND-P------------------RNMAHAMAAVKKAGKHAQGTICYTISP-------V 171 (539)
T ss_dssp HHHHHHHTTCCEEEEC----CTTCC-T------------------HHHHHHHHHHHHTTCEEEEEEECCCST-------T
T ss_pred HHHHHHhCCCCEEEEE----EehhH-H------------------HHHHHHHHHHHHCCCeEEEEEEeeeCC-------C
Confidence 23456667 8999973 11110 0 236789999999999887444 2221 2
Q ss_pred hCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCC--CcceEE
Q 006566 251 YGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW--DYPLHL 311 (640)
Q Consensus 251 yGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~--dyPLHL 311 (640)
| +| +-+++.++-+.+.|-+ .|++|.++=..+=..++.+++.+.++ + +-|||+
T Consensus 172 ~--~~----e~~~~~a~~l~~~Gad--~I~L~DT~G~~~P~~v~~lv~~l~~~-~p~~i~I~~ 225 (539)
T 1rqb_A 172 H--TV----EGYVKLAGQLLDMGAD--SIALKDMAALLKPQPAYDIIKAIKDT-YGQKTQINL 225 (539)
T ss_dssp C--CH----HHHHHHHHHHHHTTCS--EEEEEETTCCCCHHHHHHHHHHHHHH-HCTTCCEEE
T ss_pred C--CH----HHHHHHHHHHHHcCCC--EEEeCCCCCCcCHHHHHHHHHHHHHh-cCCCceEEE
Confidence 2 44 5666777777888876 78899877655555666666665433 2 456655
No 226
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=77.74 E-value=9.1 Score=41.54 Aligned_cols=103 Identities=14% Similarity=0.087 Sum_probs=78.2
Q ss_pred CHHHHHHHHHH-HHHcCCCEEEEecC-CHHHHHHHHHHHHHhhcCCCCcceeeccCC--CHHHHHHHhhh--cCceeeCC
Q 006566 116 DVAGTVEEVMR-IADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAEC--FDKIRVNP 189 (640)
Q Consensus 116 Dv~atv~Qi~r-l~~aGceiVRvtvp-~~~~A~~l~~I~~~L~~~g~~iPLVADIHF--~~~~Al~Aa~~--v~KVRINP 189 (640)
+.+..++-+++ |.+.+ |+=|-=| ..++-+.++.+++++ +.++||++|=.| ++.-...+++. ++-|.|-+
T Consensus 290 t~~eai~~~~~lle~y~--i~~IEdPl~~dD~eg~~~L~~~~---~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv 364 (449)
T 3uj2_A 290 ASEELVAHWKSLCERYP--IVSIEDGLDEEDWEGWQYMTREL---GDKIQLVGDDLFVTNTERLNKGIKERCGNSILIKL 364 (449)
T ss_dssp EHHHHHHHHHHHHHHSC--EEEEESCSCTTCHHHHHHHHHHH---TTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH
T ss_pred CHHHHHHHHHHHHHhcC--ceEEECCCCcchHHHHHHHHHHh---CCCceEECCcceeCCHHHHHHHHHcCCCCEEEECc
Confidence 45666666666 66665 7767645 345788899998863 458999999776 79888888764 99999999
Q ss_pred CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcH
Q 006566 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD 245 (640)
Q Consensus 190 GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ 245 (640)
..+|.-.. ..++++.|+++|+++=+|-++|--++
T Consensus 365 ~~iGGiTe----------------------a~kia~lA~~~Gi~~~v~H~sgET~d 398 (449)
T 3uj2_A 365 NQIGTVSE----------------------TLEAIKMAHKAGYTAVVSHRSGETED 398 (449)
T ss_dssp HHHCSHHH----------------------HHHHHHHHHHTTCEEEEECCSBCCSC
T ss_pred cccCCHHH----------------------HHHHHHHHHHcCCeEEEeCCCCCchH
Confidence 99987432 67889999999999778877775544
No 227
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=77.59 E-value=3.9 Score=42.62 Aligned_cols=113 Identities=17% Similarity=0.207 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHH----HHhhcCCC-CcceeeccC--CCHHHHHHHhhhcCceeeCCCC
Q 006566 119 GTVEEVMRIADQGADLVRITVQGKREADACFEIK----NSLVQKNY-NIPLVADIH--FAPSVALRVAECFDKIRVNPGN 191 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~----~~L~~~g~-~iPLVADIH--F~~~~Al~Aa~~v~KVRINPGN 191 (640)
.-++-.++=.+||||. +-+|=.=+++.+.+.. ++.++.|+ ++|+|+=|= -+++-|.-. . -||-
T Consensus 166 ~d~~~Lk~KvdAGAdf--~ITQ~ffD~e~~~~f~~~~~~~~r~~Gi~~vPIipGImPi~s~k~~~f~-~-------~~G~ 235 (315)
T 3ijd_A 166 DEHLRIIDKINKGCKY--FITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLTPCGSTKTLEFM-K-------WLGI 235 (315)
T ss_dssp CHHHHHHHHHHTTCCE--EEESCCCCHHHHHHHHHHHHHHHHHTTBCCCCEEEEECCCCSHHHHHHH-H-------HHTC
T ss_pred HHHHHHHHHHHCCCCE--EEccccCCHHHHHHHHHHHHHHHHHCCCCCCcEEEEeeecCCHHHHHHH-h-------cCCC
Confidence 3456667778999995 5677666666666666 67888999 999999975 256654321 1 3443
Q ss_pred CCchh--hhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHh
Q 006566 192 FADRR--AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDR 246 (640)
Q Consensus 192 ~~d~~--k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~r 246 (640)
-...+ +.++ .+.| .-+..++-..+.+..|++.|...|+|| |.|-=|+|.|
T Consensus 236 ~IP~~l~~~l~--~~~d-~~~~Gi~~a~e~~~~L~~~~~g~~~p~--G~niesv~~r 287 (315)
T 3ijd_A 236 SIPRWLENDLM--NCED-ILNKSVSLSKSIFNELMEFCLEKGIPI--GCNIESVSVR 287 (315)
T ss_dssp CCCHHHHHHHH--TTCC-CHHHHHHHHHHHHHHHHHHHHHHTCCE--EEEEEECCSC
T ss_pred CCCHHHHHHHH--hCCC-HHHHHHHHHHHHHHHHHHhcCcCCcCC--CccHHHHHhH
Confidence 33322 0122 2333 345678888889999999999999885 9999999988
No 228
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=77.56 E-value=8.7 Score=39.68 Aligned_cols=68 Identities=19% Similarity=0.302 Sum_probs=52.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC--CH-HHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQ--GK-READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp--~~-~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.|.+..++++.++.++|.+.+.+-+- +. .+.+.++.|++.+ |.++||..|.| |++.-|...++.+++.
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---G~d~~l~vDan~~~~~~~a~~~~~~l~~~ 217 (371)
T 2ovl_A 145 LPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL---GDSFPLMVDANMKWTVDGAIRAARALAPF 217 (371)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH---CTTSCEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 37899999999999999999998764 33 4667788888753 66899999988 6666666666666654
No 229
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=77.53 E-value=7.2 Score=40.90 Aligned_cols=67 Identities=13% Similarity=0.316 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecC---C----------------HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHH
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQ---G----------------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSV 174 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp---~----------------~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~ 174 (640)
+.+..++++.++.++|.+-|.+-+- + ..+.+.++.|++. -|.++||..|.| |++.-
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea---~G~d~~l~vDan~~~~~~~ 225 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREA---VGPEVEVAIDMHGRFDIPS 225 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHH---HCSSSEEEEECTTCCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHh---cCCCCEEEEECCCCCCHHH
Confidence 6788999999999999999999872 3 2355667777764 377899999998 55665
Q ss_pred HHHHhhhcCce
Q 006566 175 ALRVAECFDKI 185 (640)
Q Consensus 175 Al~Aa~~v~KV 185 (640)
|...++.+++.
T Consensus 226 a~~~~~~l~~~ 236 (410)
T 2qq6_A 226 SIRFARAMEPF 236 (410)
T ss_dssp HHHHHHHHGGG
T ss_pred HHHHHHHHhhc
Confidence 65555556554
No 230
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=77.10 E-value=8.8 Score=40.20 Aligned_cols=84 Identities=15% Similarity=0.301 Sum_probs=59.5
Q ss_pred cCCCCceEEEeccCC--C-CCCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccC--
Q 006566 98 IGSEHPIRVQTMTTN--D-TKDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH-- 169 (640)
Q Consensus 98 IGG~~PI~VQSMt~t--~-T~Dv~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIH-- 169 (640)
+||. .-+|..+++. . ..|.+..++++.++.++|.+.|.+-+-. ..+.+.++.|++.+ |-++||..|.|
T Consensus 155 LGg~-~~~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~av---G~d~~l~vDan~~ 230 (398)
T 2pp0_A 155 LGAH-RDSVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREAL---GDEFPLMVDANQQ 230 (398)
T ss_dssp HCCS-CSEEEEEECTTSCTTSCHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHH---CSSSCEEEECTTC
T ss_pred hCCC-CCCeeEEEecCCcCCCCHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHc---CCCCeEEEECCCC
Confidence 4654 3355555542 2 1388999999999999999999997753 34567777777753 67899999988
Q ss_pred CCHHHHHHHhhhcCce
Q 006566 170 FAPSVALRVAECFDKI 185 (640)
Q Consensus 170 F~~~~Al~Aa~~v~KV 185 (640)
|++.-|...++.+++.
T Consensus 231 ~~~~~ai~~~~~l~~~ 246 (398)
T 2pp0_A 231 WDRETAIRMGRKMEQF 246 (398)
T ss_dssp SCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHHc
Confidence 6666666666656654
No 231
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=77.10 E-value=3.4 Score=43.48 Aligned_cols=106 Identities=13% Similarity=0.236 Sum_probs=79.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+.+++|=- | ..-+.+.+++-+++|.+.|.+.+==-+| ..+.+.+..++++ +++|+.+|=. +++.-+.
T Consensus 216 ~G~~~~l~vDa--N-~~~~~~~A~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 286 (390)
T 3ugv_A 216 VGRDTALMVDF--N-QGLDMAEAMHRTRQIDDLGLEWIEEPVV-YDNFDGYAQLRHD-----LKTPLMIGENFYGPREMH 286 (390)
T ss_dssp HCTTSEEEEEC--T-TCCCHHHHHHHHHHHTTSCCSEEECCSC-TTCHHHHHHHHHH-----CSSCEEECTTCCSHHHHH
T ss_pred hCCCCEEEEEC--C-CCCCHHHHHHHHHHHHhhCCCEEECCCC-cccHHHHHHHHHh-----cCCCEEeCCCcCCHHHHH
Confidence 57778888742 2 2346788888889999999888754343 2356777888875 7899999955 4566776
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
.+++. ++-|.|.|+..|.-.. ...+...|+++|+++
T Consensus 287 ~~i~~~a~d~v~ik~~~~GGit~----------------------~~~i~~~A~~~gi~~ 324 (390)
T 3ugv_A 287 QALQAGACDLVMPDFMRIGGVSG----------------------WMRAAGVAGAWGIPM 324 (390)
T ss_dssp HHHHTTCCSEECCBHHHHTHHHH----------------------HHHHHHHHHHHTCCB
T ss_pred HHHHcCCCCEEEeCccccCCHHH----------------------HHHHHHHHHHcCCEE
Confidence 66653 9999999999887432 678999999999987
No 232
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=77.00 E-value=4.4 Score=43.19 Aligned_cols=84 Identities=15% Similarity=0.320 Sum_probs=59.9
Q ss_pred ecCCCC--ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC---------------------------------
Q 006566 97 AIGSEH--PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG--------------------------------- 141 (640)
Q Consensus 97 ~IGG~~--PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~--------------------------------- 141 (640)
.+||.. .|++ -.+....+.+..+++++++.+.|...+.+-+-.
T Consensus 131 LLGG~~r~~v~~--y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~ 208 (425)
T 3vcn_A 131 LLGGACRTGVTV--YGHANGETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAK 208 (425)
T ss_dssp GTTCCSSSSEEE--EEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHH
T ss_pred HcCCCCCCeeeE--EEeCCCCCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchh
Confidence 356653 3444 223334678999999999999999999986521
Q ss_pred --HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 142 --KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 142 --~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.++.+.++.||+.+ |-++||..|.| |++.-|+..++.+++.
T Consensus 209 ~~~~d~e~v~avR~a~---G~d~~l~vDaN~~~~~~~A~~~~~~L~~~ 253 (425)
T 3vcn_A 209 YLNSVPKLFERAREVL---GWDVHLLHDVHHRLTPIEAARLGKDLEPY 253 (425)
T ss_dssp HHTTTHHHHHHHHHHH---CSSSEEEEECTTCCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHc---CCCCEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 24567788888753 66899999998 6777777776766654
No 233
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=76.98 E-value=9.2 Score=40.95 Aligned_cols=101 Identities=13% Similarity=0.083 Sum_probs=74.9
Q ss_pred CHHHHHHHH-HHHHHcCCCEEEEecC-CHHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhh--cCceeeCC
Q 006566 116 DVAGTVEEV-MRIADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAEC--FDKIRVNP 189 (640)
Q Consensus 116 Dv~atv~Qi-~rl~~aGceiVRvtvp-~~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~--v~KVRINP 189 (640)
+.+..++-. +.|.+.+ |+=|-=| ..++-+.++.+++++ |.++||++|=. +++.-...+++. ++-|.|.|
T Consensus 273 ~a~~~~~~~~~~l~~y~--i~~iEdPl~~~D~~g~~~l~~~~---g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik~ 347 (432)
T 2ptz_A 273 TAEQLRETYCKWAHDYP--IVSIEDPYDQDDFAGFAGITEAL---KGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLKI 347 (432)
T ss_dssp CHHHHHHHHHHHHHHSC--EEEEECCSCTTCHHHHHHHHHHT---TTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH
T ss_pred CHHHHHHHHHHHHHhCC--ceEEECCCCcchHHHHHHHHHhc---CCCCeEEecCcccCCHHHHHHHHHcCCCCEEEecc
Confidence 334444333 4555664 7777766 456788999999863 34899999976 788887777765 99999999
Q ss_pred CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCC
Q 006566 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (640)
Q Consensus 190 GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSL 243 (640)
..+|.=.. ...+++.|+++|+++=+|-.+|.-
T Consensus 348 ~~~GGite----------------------a~~i~~lA~~~g~~v~~~h~~get 379 (432)
T 2ptz_A 348 NQIGTISE----------------------AIASSKLCMENGWSVMVSHRSGET 379 (432)
T ss_dssp HHHCCHHH----------------------HHHHHHHHHHTTCEEEEECCSBCC
T ss_pred cccCCHHH----------------------HHHHHHHHHHcCCeEEecCCCCcc
Confidence 99987442 677999999999999777666653
No 234
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=76.57 E-value=5.6 Score=42.37 Aligned_cols=83 Identities=23% Similarity=0.392 Sum_probs=58.3
Q ss_pred cCCCC--ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC-------------------------C---------
Q 006566 98 IGSEH--PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ-------------------------G--------- 141 (640)
Q Consensus 98 IGG~~--PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp-------------------------~--------- 141 (640)
+||.. .|.+ -++....+.+..++++++..+.|...+.+-+- +
T Consensus 131 LGG~~r~~v~~--y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~ 208 (424)
T 3v3w_A 131 LGGKSRERILS--YTHANGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKY 208 (424)
T ss_dssp HTCCSCSSEEE--EEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHH
T ss_pred hCCcCCCceeE--EEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhH
Confidence 56643 3444 22333467899999999999999999998652 1
Q ss_pred -HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 142 -KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 142 -~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.++.+.++.||+. -|-++||..|.| |++.-|+..++.+++.
T Consensus 209 ~~~d~e~v~avR~a---vG~d~~l~vDaN~~~~~~~A~~~~~~L~~~ 252 (424)
T 3v3w_A 209 LNYIPDVFAAVRKE---FGPDIHLLHDVHHRLTPIEAARLGKALEPY 252 (424)
T ss_dssp HHHHHHHHHHHHHH---HCSSSEEEEECTTCCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHH---cCCCCcEEEeCCCCCCHHHHHHHHHHHHhc
Confidence 2456667777774 367899999998 5666676666666654
No 235
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=76.44 E-value=5.9 Score=41.37 Aligned_cols=69 Identities=16% Similarity=0.312 Sum_probs=52.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC-CH-HHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCcee
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQ-GK-READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIR 186 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp-~~-~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KVR 186 (640)
.|.+..++++.++.++|.+.|.+-+- +. .+.+.++.|++.+ |-++||..|.| |++.-|...++.+++..
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v~avR~a~---g~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 216 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMVAEVRRAV---GDDVDLFIDINGAWTYDQALTTIRALEKYN 216 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHHHHHHHHH---CTTSCEEEECTTCCCHHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHHHHHHHhh---CCCCEEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 57899999999999999999999764 33 3556777777753 66899999988 66666666666666643
No 236
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=76.35 E-value=7.6 Score=40.51 Aligned_cols=69 Identities=19% Similarity=0.329 Sum_probs=51.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEec-----CC----------------HHHHHHHHHHHHHhhcCCCCcceeeccC--CC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITV-----QG----------------KREADACFEIKNSLVQKNYNIPLVADIH--FA 171 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtv-----p~----------------~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~ 171 (640)
.|.+..++++.++.++|.+.|.+-+ .+ ..+.+.++.|++. -|.++||..|.| |+
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~a---vG~d~~l~vDan~~~~ 221 (403)
T 2ox4_A 145 GRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNA---VGPDVDIIVENHGHTD 221 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHH---HCTTSEEEEECTTCSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHH---hCCCCeEEEECCCCCC
Confidence 3889999999999999999999975 23 2355667777764 377899999998 45
Q ss_pred HHHHHHHhhhcCcee
Q 006566 172 PSVALRVAECFDKIR 186 (640)
Q Consensus 172 ~~~Al~Aa~~v~KVR 186 (640)
+.-|...++.+++..
T Consensus 222 ~~~ai~~~~~l~~~~ 236 (403)
T 2ox4_A 222 LVSAIQFAKAIEEFN 236 (403)
T ss_dssp HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHhhC
Confidence 555555555566543
No 237
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=76.27 E-value=6.4 Score=38.35 Aligned_cols=77 Identities=17% Similarity=0.157 Sum_probs=53.1
Q ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEec---CCHHHHHHHHHHHHHhhcCCCCcceeec--cCCCHHHHHH
Q 006566 103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV---QGKREADACFEIKNSLVQKNYNIPLVAD--IHFAPSVALR 177 (640)
Q Consensus 103 PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtv---p~~~~A~~l~~I~~~L~~~g~~iPLVAD--IHF~~~~Al~ 177 (640)
|+.|.=+..+.-.|.+..++-++.+.++|+|.|+..+ ++-...+.++.+++.+ +.++|++|- |+ ++.-|++
T Consensus 117 pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v---~~~ipVia~GGI~-t~~da~~ 192 (225)
T 1mzh_A 117 SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSA---KGRIKVKASGGIR-DLETAIS 192 (225)
T ss_dssp TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHH---TTSSEEEEESSCC-SHHHHHH
T ss_pred CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHh---CCCCcEEEECCCC-CHHHHHH
Confidence 5544444444445556677778888999999998776 2223557777777753 346888875 55 6888888
Q ss_pred Hhhh-cC
Q 006566 178 VAEC-FD 183 (640)
Q Consensus 178 Aa~~-v~ 183 (640)
.++. ++
T Consensus 193 ~l~aGA~ 199 (225)
T 1mzh_A 193 MIEAGAD 199 (225)
T ss_dssp HHHTTCS
T ss_pred HHHhCch
Confidence 8877 66
No 238
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=76.27 E-value=47 Score=34.38 Aligned_cols=159 Identities=14% Similarity=0.191 Sum_probs=97.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCC-CCcceeeccC--CCHHHHHHHhhhcCceeeC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKN-YNIPLVADIH--FAPSVALRVAECFDKIRVN 188 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g-~~iPLVADIH--F~~~~Al~Aa~~v~KVRIN 188 (640)
.|.+..++++.++.+.|..-+.+-+-. .++.+.++.+++. -| -+++|..|-| |++.-|...++.+++..|
T Consensus 161 ~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avr~~---~g~~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i- 236 (377)
T 2pge_A 161 GEAAFMQEQIEAKLAEGYGCLKLKIGAIDFDKECALLAGIRES---FSPQQLEIRVDANGAFSPANAPQRLKRLSQFHL- 236 (377)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEC---CHHHHHHHHHHHHHH---SCTTTCEEEEECTTBBCTTTHHHHHHHHHTTCC-
T ss_pred CCHHHHHHHHHHHHHHhhhhheeecCCCChHHHHHHHHHHHHH---cCCCCceEEEECCCCCCHHHHHHHHHHHhcCCC-
Confidence 467889999999999999999988753 4566777777775 36 5699999977 555556555555655432
Q ss_pred CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcH----hHHHHhC-C----Ch--HH
Q 006566 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD----RIMSYYG-D----SP--RG 257 (640)
Q Consensus 189 PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~----ril~ryG-d----tp--~g 257 (640)
.- +|+=.- .+.+..+.+.+++.++||=.|=+.-++.+ +.++.-. | .| .|
T Consensus 237 ----~~----iEqP~~------------~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ik~~~~G 296 (377)
T 2pge_A 237 ----HS----IEQPIR------------QHQWSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQYIILKPSLLG 296 (377)
T ss_dssp ----SE----EECCBC------------SSCHHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHHHHT
T ss_pred ----cE----EEccCC------------cccHHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCCEEEECchhcC
Confidence 11 111000 00133344555666788876766666666 4444322 2 12 23
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHH
Q 006566 258 MVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299 (640)
Q Consensus 258 MVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~ 299 (640)
=+..+++.+++|++.|+. +++|.=. ...+...+.-.|+..
T Consensus 297 Git~~~~i~~~A~~~g~~-~~~~~~~-es~i~~~a~~hlaa~ 336 (377)
T 2pge_A 297 GFHYAGQWIELARERGIG-FWITSAL-ESNLGLAAIAQWTAL 336 (377)
T ss_dssp SHHHHHHHHHHHHHTTCE-EEEBCCS-CCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCe-EEecCCc-ccHHHHHHHHHHHHC
Confidence 367788999999999986 4444212 234455555556655
No 239
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=76.24 E-value=12 Score=39.51 Aligned_cols=99 Identities=15% Similarity=0.260 Sum_probs=63.8
Q ss_pred HHHHHHHHHHcCCCEEEEec---CCHHHHHHHHHHHHHhhcCCCCcceee-ccCCCHHHHHHHhhh-cCceee--CCCCC
Q 006566 120 TVEEVMRIADQGADLVRITV---QGKREADACFEIKNSLVQKNYNIPLVA-DIHFAPSVALRVAEC-FDKIRV--NPGNF 192 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtv---p~~~~A~~l~~I~~~L~~~g~~iPLVA-DIHF~~~~Al~Aa~~-v~KVRI--NPGN~ 192 (640)
..+++..+.++|+++|=|.+ ++..-.+.++.||+. .-++|+++ .+ .++..|..+.++ +|-|.+ -||-.
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~----~p~v~Vi~G~v-~t~e~A~~a~~aGAD~I~vG~gpGs~ 183 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA----YPHLEIIGGNV-ATAEGARALIEAGVSAVKVGIGPGSI 183 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH----CTTCEEEEEEE-CSHHHHHHHHHHTCSEEEECSSCSTT
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHh----cCCCceEeeee-CCHHHHHHHHHcCCCEEEEecCCCCC
Confidence 56788999999999998854 234445667778775 12689876 44 489999999999 999998 36644
Q ss_pred CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 193 ~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
...+. ....-. .--+.+.++.+.|++.++|+
T Consensus 184 ~~tr~-~~g~g~----------p~~~~l~~v~~~~~~~~iPV 214 (366)
T 4fo4_A 184 CTTRI-VTGVGV----------PQITAIADAAGVANEYGIPV 214 (366)
T ss_dssp BCHHH-HHCCCC----------CHHHHHHHHHHHHGGGTCCE
T ss_pred CCccc-ccCccc----------chHHHHHHHHHHHhhcCCeE
Confidence 22110 000000 00123455666777889998
No 240
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=76.23 E-value=10 Score=38.73 Aligned_cols=157 Identities=13% Similarity=0.171 Sum_probs=90.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC-CH-HHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCceeeCCC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQ-GK-READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIRVNPG 190 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp-~~-~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KVRINPG 190 (640)
.|.+..++++.++.++|.+.+.+-+- +. ++.+.++.|++. |-++||..|.| |++.-|...++.+++.+|-+|
T Consensus 138 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v~avr~~----g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~ 213 (345)
T 2zad_A 138 DTVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKV----TRGAKYIVDANMGYTQKEAVEFARAVYQKGIDIA 213 (345)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHH----STTCEEEEECTTCSCHHHHHHHHHHHHHTTCCCS
T ss_pred CCHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHHHHHHhh----CCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCee
Confidence 46788899999999999999999774 33 345566666653 78899999987 566666666666666555533
Q ss_pred CCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcH-----hHHHHhC-C--C---hHHHH
Q 006566 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSD-----RIMSYYG-D--S---PRGMV 259 (640)
Q Consensus 191 N~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~-----ril~ryG-d--t---p~gMV 259 (640)
-|-++ +. ..| +..+-+..++.++||=.| +|+.. ++++.-. | . ..|=+
T Consensus 214 ~iE~P---~~---~~~-------------~~~~~~l~~~~~ipia~d---E~~~~~~~~~~~i~~~~~d~v~ik~~~GGi 271 (345)
T 2zad_A 214 VYEQP---VR---RED-------------IEGLKFVRFHSPFPVAAD---ESARTKFDVMRLVKEEAVDYVNIKLMKSGI 271 (345)
T ss_dssp EEECC---SC---TTC-------------HHHHHHHHHHSSSCEEES---TTCCSHHHHHHHHHHTCCSEEEECHHHHHH
T ss_pred eeeCC---CC---ccc-------------HHHHHHHHHhCCCCEEEe---CCcCCHHHHHHHHHhCCCCEEEEecccccH
Confidence 33221 11 011 222233344456776333 33321 2222211 2 1 13667
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHH
Q 006566 260 ESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAE 299 (640)
Q Consensus 260 eSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~ 299 (640)
..+++-+++|+++|.. ++++.= ....+...+.-.|+..
T Consensus 272 t~~~~i~~~A~~~g~~-~~~~~~-~es~i~~aa~~hlaa~ 309 (345)
T 2zad_A 272 SDALAIVEIAESSGLK-LMIGCM-GESSLGINQSVHFALG 309 (345)
T ss_dssp HHHHHHHHHHHTTTCE-EEECCS-SCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCe-EEEecC-cccHHHHHHHHHHHHc
Confidence 7788888888888874 444421 1223445555555554
No 241
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=76.21 E-value=7.3 Score=40.39 Aligned_cols=69 Identities=17% Similarity=0.262 Sum_probs=53.9
Q ss_pred CCCHHHHHHHHHHHHHc-CCCEEEEecC--CH-HHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 114 TKDVAGTVEEVMRIADQ-GADLVRITVQ--GK-READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~a-GceiVRvtvp--~~-~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
-.+.+..+++++++.+. |...+.+-+- .. ++.+.++.|++.+ |-++||..|.| |++.-|...++.+++.
T Consensus 137 ~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~---g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 211 (367)
T 3dg3_A 137 FDDPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERF---GDAIELYVDGNRGWSAAESLRAMREMADL 211 (367)
T ss_dssp SSCHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHH---GGGSEEEEECTTCSCHHHHHHHHHHTTTS
T ss_pred CCCHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHh---CCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 35789999999999999 9999999873 23 7888888888853 56799999988 5566666666666654
No 242
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=75.88 E-value=8.9 Score=39.88 Aligned_cols=85 Identities=13% Similarity=0.169 Sum_probs=60.8
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC--C-HHHHHHHHHHHHHhhcCCCCcceeeccC--CCH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ--G-KREADACFEIKNSLVQKNYNIPLVADIH--FAP 172 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp--~-~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~ 172 (640)
+||...=+|..=.+....+.+..++|+.+..+.|..-+.+-+- + .++.+.++.|++.++ |-+++|..|-| |++
T Consensus 132 LGG~~r~~v~~y~s~~~~~~~~~~~~a~~~~~~G~~~~KiKvg~~~~~~di~~v~~vr~a~~--g~~~~l~vDaN~~~~~ 209 (376)
T 4h2h_A 132 LGGALTDSVSSYYSLGVMEPDEAARQALEKQREGYSRLQVKLGARPIEIDIEAIRKVWEAVR--GTGIALAADGNRGWTT 209 (376)
T ss_dssp TTCCSCSEEECEEEECSCCHHHHHHHHHHHHHHTCSEEEEECCSSCHHHHHHHHHHHHHHHT--TSCCEEEEECTTCCCH
T ss_pred CCCCcCCceeEeeecccCCHHHHHHHHHHHHhcCceEEEEecCCCCHHHHHHHHHHHHhhcc--CCeeEEEEeeccCCCH
Confidence 4554433344333445567899999999999999999988763 3 457788888887653 77899999988 666
Q ss_pred HHHHHHhhhcCc
Q 006566 173 SVALRVAECFDK 184 (640)
Q Consensus 173 ~~Al~Aa~~v~K 184 (640)
.-|+..++.++.
T Consensus 210 ~~A~~~~~~l~~ 221 (376)
T 4h2h_A 210 RDALRFSRECPD 221 (376)
T ss_dssp HHHHHHHHHCTT
T ss_pred HHHHHHHHHHhh
Confidence 666666665543
No 243
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=75.72 E-value=8.2 Score=39.66 Aligned_cols=67 Identities=15% Similarity=0.225 Sum_probs=51.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCc
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDK 184 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~K 184 (640)
.|.+..++++.++.++|...+.+-+-. ..+.+.++.|++.+ |.++||..|.| |++.-|...++.+++
T Consensus 139 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~---g~~~~l~vDan~~~~~~~a~~~~~~l~~ 210 (366)
T 1tkk_A 139 NSPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV---GSAVKLRLDANQGWRPKEAVTAIRKMED 210 (366)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHH---CSSSEEEEECTTCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHHHhh
Confidence 467888999999999999999997653 34667778887753 66899999987 556666666655554
No 244
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=75.57 E-value=3.4 Score=42.59 Aligned_cols=94 Identities=12% Similarity=0.165 Sum_probs=68.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHHHHhhh--cCceeeCCCCC
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAEC--FDKIRVNPGNF 192 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al~Aa~~--v~KVRINPGN~ 192 (640)
+.+. ++-+++|.+.|.+++===+| ..+.+.++.++++ +++|+++|=. +++.-+..+++. ++-|.|.|...
T Consensus 194 ~~~~-~~~~~~l~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 266 (369)
T 2zc8_A 194 SLAN-LAQLKRLDELRLDYIEQPLA-YDDLLDHAKLQRE-----LSTPICLDESLTGAEKARKAIELGAGRVFNVKPARL 266 (369)
T ss_dssp CGGG-HHHHHGGGGGCCSCEECCSC-TTCSHHHHHHHHH-----CSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHH
T ss_pred CHHH-HHHHHHHHhCCCcEEECCCC-cccHHHHHHHHhh-----CCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhh
Confidence 4455 66677777788777653333 2456677778775 7899999965 467777777754 99999999988
Q ss_pred CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 193 ~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
|.-.. ...+...|+++|+++=+|-
T Consensus 267 GGit~----------------------~~~i~~~A~~~g~~~~~~~ 290 (369)
T 2zc8_A 267 GGHGE----------------------SLRVHALAESAGIPLWMGG 290 (369)
T ss_dssp TSHHH----------------------HHHHHHHHHHTTCCEEECC
T ss_pred CCHHH----------------------HHHHHHHHHHcCCcEEecC
Confidence 87432 6789999999999964544
No 245
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=75.54 E-value=10 Score=41.57 Aligned_cols=100 Identities=12% Similarity=0.213 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHHhhcCCCCcceee-ccCCCHHHHHHHhhh-cCceee--CCCC
Q 006566 119 GTVEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNYNIPLVA-DIHFAPSVALRVAEC-FDKIRV--NPGN 191 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvtvp~~---~~A~~l~~I~~~L~~~g~~iPLVA-DIHF~~~~Al~Aa~~-v~KVRI--NPGN 191 (640)
.+.+.+..|.++|++.|=|.+... .-.+.+++|++. --++|+|+ ++. ++..|..++++ +|-|.+ -||.
T Consensus 256 d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~----~~~~~vi~g~v~-t~e~a~~~~~aGad~i~vg~g~gs 330 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAK----YPSLNIIAGNVA-TAEATKALIEAGANVVKVGIGPGS 330 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH----CTTSEEEEEEEC-SHHHHHHHHHHTCSEEEECSSCST
T ss_pred chHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHh----CCCceEEeeeec-cHHHHHHHHHhCCCEEEECCCCcc
Confidence 357889999999999999976543 333466666664 22489998 665 89999999999 998886 4444
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
+...+. +.... ..--+.+.++.+.|+++++|+
T Consensus 331 i~~~~~-~~g~g----------~p~~~~l~~v~~~~~~~~iPV 362 (511)
T 3usb_A 331 ICTTRV-VAGVG----------VPQLTAVYDCATEARKHGIPV 362 (511)
T ss_dssp TCCHHH-HHCCC----------CCHHHHHHHHHHHHHTTTCCE
T ss_pred cccccc-ccCCC----------CCcHHHHHHHHHHHHhCCCcE
Confidence 432110 00000 000123556777889999998
No 246
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=75.30 E-value=6.2 Score=39.87 Aligned_cols=48 Identities=15% Similarity=0.196 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHcCCCEEEEec--CCHHHHHHHHHHHHHhhcCCCCcceee
Q 006566 119 GTVEEVMRIADQGADLVRITV--QGKREADACFEIKNSLVQKNYNIPLVA 166 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvtv--p~~~~A~~l~~I~~~L~~~g~~iPLVA 166 (640)
..++...++.+.|||||+|++ .+.+|.-.|-+..++.++...+.|+||
T Consensus 160 el~~~~~~~~~~GaDIvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa 209 (259)
T 3l9c_A 160 NLMEVFSELTALAPRVVKIAVMPKNEQDVLDLMNYTRGFKTLNPNQEYVT 209 (259)
T ss_dssp THHHHHHHHHHTCCSEEEEEECCSSHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEecCCCHHHHHHHHHHHHHHHhccCCCCEEE
Confidence 466777888899999999986 456777777777776655455688875
No 247
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=75.24 E-value=2.4 Score=47.46 Aligned_cols=66 Identities=24% Similarity=0.381 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCCCEEEEec--------C-----CHHHHHHHHHHHHHhhcCCCCcceeec--cCCCHHHHHHHhhh-c
Q 006566 119 GTVEEVMRIADQGADLVRITV--------Q-----GKREADACFEIKNSLVQKNYNIPLVAD--IHFAPSVALRVAEC-F 182 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvtv--------p-----~~~~A~~l~~I~~~L~~~g~~iPLVAD--IHF~~~~Al~Aa~~-v 182 (640)
+|-++.+.|+++|+|.|+|-+ . +.-.+.++.++.+.. +++.+|+||| |++.-.+| +|+-+ +
T Consensus 331 aT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a--~~~~vpvIADGGI~~sGDi~-KAlaaGA 407 (556)
T 4af0_A 331 VTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFA--SRFGIPCIADGGIGNIGHIA-KALALGA 407 (556)
T ss_dssp CSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHH--GGGTCCEEEESCCCSHHHHH-HHHHTTC
T ss_pred cCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHH--HHcCCCEEecCCcCcchHHH-HHhhcCC
Confidence 355677888999999999842 1 123455555555542 2577999999 88888888 44555 7
Q ss_pred Cceee
Q 006566 183 DKIRV 187 (640)
Q Consensus 183 ~KVRI 187 (640)
+.|=+
T Consensus 408 d~VMl 412 (556)
T 4af0_A 408 SAVMM 412 (556)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 87876
No 248
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=75.10 E-value=10 Score=39.36 Aligned_cols=86 Identities=12% Similarity=0.177 Sum_probs=58.4
Q ss_pred cCCCCceEEEeccC--C-CCCCHHHHHHHHHHHHHcCCCEEEEecC-------------------C-HHHHHHHHHHHHH
Q 006566 98 IGSEHPIRVQTMTT--N-DTKDVAGTVEEVMRIADQGADLVRITVQ-------------------G-KREADACFEIKNS 154 (640)
Q Consensus 98 IGG~~PI~VQSMt~--t-~T~Dv~atv~Qi~rl~~aGceiVRvtvp-------------------~-~~~A~~l~~I~~~ 154 (640)
+||...=+|.++++ + ...|.+..++++.++.++|.+.|.+-+- + ..+.+.++.|++.
T Consensus 116 LGg~~~~~v~~y~~g~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a 195 (392)
T 2poz_A 116 FGGKIRDRVRAYANGWYGAADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDA 195 (392)
T ss_dssp TTCCSCSEEEEEECSCCTTCCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCccCceEEEEeccccCCCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHh
Confidence 46643224555543 2 2468899999999999999999998764 1 2345666666664
Q ss_pred hhcCCCCcceeeccC--CCHHHHHHHhhhcCcee
Q 006566 155 LVQKNYNIPLVADIH--FAPSVALRVAECFDKIR 186 (640)
Q Consensus 155 L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KVR 186 (640)
-|.++||..|.| |++.-|...++.+++..
T Consensus 196 ---~G~d~~l~vD~n~~~~~~~a~~~~~~l~~~~ 226 (392)
T 2poz_A 196 ---AGPEIELMVDLSGGLTTDETIRFCRKIGELD 226 (392)
T ss_dssp ---HCTTSEEEEECTTCSCHHHHHHHHHHHGGGC
T ss_pred ---cCCCCEEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 367899999998 55666666666566543
No 249
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=75.07 E-value=14 Score=38.44 Aligned_cols=95 Identities=14% Similarity=0.098 Sum_probs=66.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCH-HHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHHHHhh--hcCceeeCCCC
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGK-READACFEIKNSLVQKNYNIPLVADIH-FAPSVALRVAE--CFDKIRVNPGN 191 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~-~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al~Aa~--~v~KVRINPGN 191 (640)
+.+.+++-+++|.+++.++.=|-=|-. ++-+.+.+++++ +++|+.+|=. +++.-+..+++ .++-|.|.|..
T Consensus 199 ~~~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~ 273 (365)
T 3ik4_A 199 DVERALAFCAACKAESIPMVLFEQPLPREDWAGMAQVTAQ-----SGFAVAADESARSAHDVLRIAREGTASVINIKLMK 273 (365)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHH-----SSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH
T ss_pred CHHHHHHHHHHHhhCCCCceEEECCCCcccHHHHHHHHhh-----CCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc
Confidence 466666667777445555555554422 356677777774 7899999955 45655555554 49999999999
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
|.-.. ...+...|+++|+++=+|.
T Consensus 274 -GGit~----------------------~~~i~~~A~~~gi~~~~~~ 297 (365)
T 3ik4_A 274 -AGVAE----------------------GLKMIAIAQAAGLGLMIGG 297 (365)
T ss_dssp -HCHHH----------------------HHHHHHHHHHHTCEEEECC
T ss_pred -cCHHH----------------------HHHHHHHHHHcCCeEEecC
Confidence 77432 6778999999999997765
No 250
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=74.85 E-value=5.6 Score=40.77 Aligned_cols=89 Identities=15% Similarity=0.147 Sum_probs=61.3
Q ss_pred CCCCceEEE--eccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHH---------------------------H
Q 006566 99 GSEHPIRVQ--TMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADAC---------------------------F 149 (640)
Q Consensus 99 GG~~PI~VQ--SMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l---------------------------~ 149 (640)
+|.+=|.+. |-..+-..|...|++-+++|.++|-..+=++++|...|+.+ +
T Consensus 101 ~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~ 180 (265)
T 1wv2_A 101 DGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLR 180 (265)
T ss_dssp TSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHH
T ss_pred CCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHH
Confidence 445544443 44455568999998888887666666655555555555444 4
Q ss_pred HHHHHhhcCCCCcceeeccCCC-HHHHHHHhhh-cCceeeCCCCC
Q 006566 150 EIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNPGNF 192 (640)
Q Consensus 150 ~I~~~L~~~g~~iPLVADIHF~-~~~Al~Aa~~-v~KVRINPGN~ 192 (640)
.|++ ..++|+|+|-... |.-|-.|++. ++.|=+|=+=.
T Consensus 181 ~I~e-----~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~ 220 (265)
T 1wv2_A 181 IILE-----EAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIA 220 (265)
T ss_dssp HHHH-----HCSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred HHHh-----cCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 4554 3789999997765 8889999999 99998886543
No 251
>2vd8_A Alanine racemase; pyridoxal 5'-phosphate, peptidoglycan synthesis, PLP, OPPF, L-alanine, isomerase, D- alanine, pyridoxal phosphate; HET: MLY LLP; 1.47A {Bacillus anthracis} PDB: 2vd9_A* 3ha1_A*
Probab=74.78 E-value=6.4 Score=40.97 Aligned_cols=140 Identities=14% Similarity=0.061 Sum_probs=76.7
Q ss_pred HHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhcccccc
Q 006566 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204 (640)
Q Consensus 125 ~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eY 204 (640)
+.+.++||+ .+.|-+..||..+. +.|++-|++-=-|+.+.-...++++ .+. + ++-+.+
T Consensus 56 ~~l~~~G~~--~f~vas~~Ea~~lr-------~~G~~~~il~~g~~~~~~~~~~~~~--~i~--~-~vds~~-------- 113 (391)
T 2vd8_A 56 XIALEAGAT--RLAVAFLDEALVLR-------RAGITAPILVLGPSPPRDINVAAEN--DVA--L-TVFQXE-------- 113 (391)
T ss_dssp HHHHHTTCC--EEEESSHHHHHHHH-------HTTCCSCEEECSCCCGGGHHHHHHT--TEE--E-ECCCHH--------
T ss_pred HHHHHcCCC--eEEeecHHHHHHHH-------hcCCCCceEEecCCChHHHHHHHHC--CeE--E-EEcCHH--------
Confidence 346789985 47888888988654 3477766542135555555555543 233 2 333311
Q ss_pred chHHHHHHHhhhHhhHHHHHHHHHHcCC--eEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEE---
Q 006566 205 TDDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF--- 279 (640)
Q Consensus 205 tdeeY~~Ele~I~~~f~~lV~~~Ke~g~--aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~divi--- 279 (640)
.+..+-+ |++.|. .+.|=+|.| |+|+|-.|. +.+.+.++.+.++. ++.+
T Consensus 114 --------------~l~~l~~-a~~~~~~~~V~lkvdtG------m~R~G~~~~---~e~~~~~~~i~~~~--~l~l~Gl 167 (391)
T 2vd8_A 114 --------------WVDEAIX-LWDGSSTMXYHINFDSG------MGRIGIRER---XELXGFLXSLEGAP--FLELEGV 167 (391)
T ss_dssp --------------HHHHHHH-HCCSSCCEEEEEEBCSS------CCSSSBCCH---HHHHHHHHHHTTCT--TEEEEEE
T ss_pred --------------HHHHHHH-HHhcCCceEEEEEEeCC------CCCCCCCch---hhHHHHHHHHhhcC--CceEEEe
Confidence 1344445 666665 456667888 578996542 33555566555532 2322
Q ss_pred -EE-EeCC------hhhHHHHHHHHHHHHHHcCCCcc-eEEE
Q 006566 280 -SM-KASN------PVVMVQAYRLLVAEMYVHGWDYP-LHLG 312 (640)
Q Consensus 280 -Sm-KsSn------~~~mV~AyRlL~~~m~~~g~dyP-LHLG 312 (640)
+. =+++ ...-.+.++.+++.+.+.|++.| +|+|
T Consensus 168 ~tH~~~~d~~~~~~~~~q~~~f~~~~~~l~~~g~~~~~~~~g 209 (391)
T 2vd8_A 168 YTHFATADEVETSYFDXQYNTFLEQLSWLXEFGVDPXFVHTA 209 (391)
T ss_dssp ECCCSSTTSSSCHHHHHHHHHHHHHHHHHHHTTCCCCSEECC
T ss_pred eeccccccCCCcHHHHHHHHHHHHHHHHHHhccCCcceEEec
Confidence 11 1121 11134556667777777787654 5765
No 252
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=74.68 E-value=1.8 Score=41.58 Aligned_cols=127 Identities=14% Similarity=0.185 Sum_probs=77.2
Q ss_pred HHHHHHHHcCCCEEEEecCCHH-HHHHHHHHHHHhhcCCCCcceee-------ccCC--CHHHHH-HHhhh-cCceeeCC
Q 006566 122 EEVMRIADQGADLVRITVQGKR-EADACFEIKNSLVQKNYNIPLVA-------DIHF--APSVAL-RVAEC-FDKIRVNP 189 (640)
Q Consensus 122 ~Qi~rl~~aGceiVRvtvp~~~-~A~~l~~I~~~L~~~g~~iPLVA-------DIHF--~~~~Al-~Aa~~-v~KVRINP 189 (640)
+.+..++++|++-|=+...-.. .. .++++++.|.+.|..+..++ |-.+ .-+-++ .|.+. +..|++.|
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~ 105 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLECVFSSPLELWREDGQLNPELEPTLRRAEACGAGWLKVSL 105 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEEEEecchhhcCCchhHHHHHHHHHHHHHHcCCCEEEEec
Confidence 4566678889999887642111 11 56777888888887654332 1123 123333 34444 99999999
Q ss_pred CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee-CCCCCcHhHHHHhCCChHHHHHHHHHHHHH
Q 006566 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARI 268 (640)
Q Consensus 190 GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv-NhGSLs~ril~ryGdtp~gMVeSAle~~~i 268 (640)
|.+.... .+..+.+.|+++|+ +|++ ||+.- ++.|+ +.+.++++.
T Consensus 106 g~~~~~~----------------------~l~~l~~~a~~~Gv--~l~lEn~~~~-------~~~~~----~~~~~ll~~ 150 (264)
T 1yx1_A 106 GLLPEQP----------------------DLAALGRRLARHGL--QLLVENDQTP-------QGGRI----EVLERFFRL 150 (264)
T ss_dssp ECCCSSC----------------------CHHHHHHHHTTSSC--EEEEECCSSH-------HHHCH----HHHHHHHHH
T ss_pred CCCCcHH----------------------HHHHHHHHHHhcCC--EEEEecCCCC-------CCCCH----HHHHHHHHH
Confidence 9775421 48889999999996 5576 77641 12233 344555555
Q ss_pred HHHCCCCcEEEEEEeCC
Q 006566 269 CRKLDFHNFLFSMKASN 285 (640)
Q Consensus 269 ~e~~~F~diviSmKsSn 285 (640)
+++.|-. +-+-+=.+|
T Consensus 151 v~~~~~~-vg~~~D~g~ 166 (264)
T 1yx1_A 151 AERQQLD-LAMTFDIGN 166 (264)
T ss_dssp HHHTTCS-EEEEEETTG
T ss_pred HHhcCCC-eEEEEehhh
Confidence 5554644 777666655
No 253
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=74.57 E-value=28 Score=34.06 Aligned_cols=138 Identities=11% Similarity=0.088 Sum_probs=74.3
Q ss_pred HHHHHHHHcCCCEEEEecCCHH-------HHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCc
Q 006566 122 EEVMRIADQGADLVRITVQGKR-------EADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFAD 194 (640)
Q Consensus 122 ~Qi~rl~~aGceiVRvtvp~~~-------~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d 194 (640)
+.+.++.++|++-|-+...+.. +.+.+.++++.|.+.|.. +++ +|-.+ .+|+++
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~--~h~~~-------------~~nl~s--- 82 (303)
T 3aal_A 22 AASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIE-EIV--VHAPY-------------IINIGN--- 82 (303)
T ss_dssp HHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCC-EEE--EECCT-------------TCCTTC---
T ss_pred HHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCc-eEE--Eeccc-------------cccCCC---
Confidence 3445667889999999433221 123455666666666662 222 24211 134433
Q ss_pred hhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCC
Q 006566 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDF 274 (640)
Q Consensus 195 ~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F 274 (640)
.. |.+..++-.+.++..++.|++.|.+. |-+..|+.. +..++.-.+.+.+.++-+-+.-
T Consensus 83 ~d------------~~~~r~~~~~~~~~~i~~A~~lGa~~-vv~h~g~~~-------~~~~~~~~~~~~~~l~~l~~~a- 141 (303)
T 3aal_A 83 TT------------NLDTFSLGVDFLRAEIERTEAIGAKQ-LVLHPGAHV-------GAGVEAGLRQIIRGLNEVLTRE- 141 (303)
T ss_dssp SS------------CHHHHHHHHHHHHHHHHHHHHHTCSE-EEECCEECT-------TSCHHHHHHHHHHHHHHHCCSS-
T ss_pred CC------------cHHHHHHHHHHHHHHHHHHHHcCCCE-EEECCCcCC-------CCCHHHHHHHHHHHHHHHHHhC-
Confidence 11 11223444556778889999999874 445556542 2233444455555555444343
Q ss_pred CcEEEEEEeCC-----hhhHHHHHHHHHHH
Q 006566 275 HNFLFSMKASN-----PVVMVQAYRLLVAE 299 (640)
Q Consensus 275 ~diviSmKsSn-----~~~mV~AyRlL~~~ 299 (640)
+.+.|.+-..+ ...+.+..+.|.+.
T Consensus 142 ~gv~l~lEn~~~~~~~~~~t~~~~~~li~~ 171 (303)
T 3aal_A 142 QNVQIALETMAGKGSECGRTFEELAYIIDG 171 (303)
T ss_dssp CSCEEEEECCCCCTTEECSSHHHHHHHHHH
T ss_pred CCCEEEEecCCCCCCccCCCHHHHHHHHHh
Confidence 67888887653 11245555556665
No 254
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=74.54 E-value=14 Score=36.75 Aligned_cols=109 Identities=17% Similarity=0.202 Sum_probs=85.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCC-cceeeccCCCHHHHHHHhhh-cCceeeCCCCC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYN-IPLVADIHFAPSVALRVAEC-FDKIRVNPGNF 192 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~-iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~ 192 (640)
.|.+..+.-.+.|.+.|...++||-.+....++++.|+++ ++ +-+-|..=.++.-|..|+++ ++=| +-||-
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~-----~p~~~IGAGTVlt~~~a~~ai~AGA~fi-vsP~~- 94 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKA-----VPEAIVGAGTVCTADDFQKAIDAGAQFI-VSPGL- 94 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHH-----CTTSEEEEECCCSHHHHHHHHHHTCSEE-EESSC-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHH-----CCCCeEeeccccCHHHHHHHHHcCCCEE-EeCCC-
Confidence 5778899999999999999999999999999999999996 44 33557777899999999998 5444 66871
Q ss_pred CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCC------eEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHH
Q 006566 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR------AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFA 266 (640)
Q Consensus 193 ~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~------aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~ 266 (640)
+ .++++.|+++|+ ++==|+ .||..+.
T Consensus 95 -~--------------------------~evi~~~~~~~v~~~~~~~~~PG~--------------~TptE~~------- 126 (217)
T 3lab_A 95 -T--------------------------PELIEKAKQVKLDGQWQGVFLPGV--------------ATASEVM------- 126 (217)
T ss_dssp -C--------------------------HHHHHHHHHHHHHCSCCCEEEEEE--------------CSHHHHH-------
T ss_pred -c--------------------------HHHHHHHHHcCCCccCCCeEeCCC--------------CCHHHHH-------
Confidence 1 358999999999 775565 4664333
Q ss_pred HHHHHCCCCcEEE
Q 006566 267 RICRKLDFHNFLF 279 (640)
Q Consensus 267 ~i~e~~~F~divi 279 (640)
-+.+.|++-+.+
T Consensus 127 -~A~~~Gad~vK~ 138 (217)
T 3lab_A 127 -IAAQAGITQLKC 138 (217)
T ss_dssp -HHHHTTCCEEEE
T ss_pred -HHHHcCCCEEEE
Confidence 347789988765
No 255
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=74.48 E-value=11 Score=40.93 Aligned_cols=100 Identities=17% Similarity=0.267 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCC-CcceeeccCCCHHHHHHHhhh-cCceee--CCCC
Q 006566 119 GTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNY-NIPLVADIHFAPSVALRVAEC-FDKIRV--NPGN 191 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~-~iPLVADIHF~~~~Al~Aa~~-v~KVRI--NPGN 191 (640)
.+.+++.+|.++|+|+|=|.+-. ....+.++.|++. + ++|+++=--.++..|..++++ +|.|.+ -||.
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~-----~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs 303 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQT-----FPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGS 303 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHH-----CTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCST
T ss_pred chHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHH-----CCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCc
Confidence 45788999999999999875432 3445777777775 5 689988544678999999999 999997 4555
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
+...+. +...-..+ -+.+.++++.|++.++|+
T Consensus 304 ~~~t~~-~~g~g~p~----------~~~l~~v~~~~~~~~iPV 335 (490)
T 4avf_A 304 ICTTRI-VAGVGVPQ----------ISAIANVAAALEGTGVPL 335 (490)
T ss_dssp TCHHHH-HTCBCCCH----------HHHHHHHHHHHTTTTCCE
T ss_pred CCCccc-cCCCCccH----------HHHHHHHHHHhccCCCcE
Confidence 432211 00000000 123566777787889998
No 256
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=74.45 E-value=4.3 Score=42.75 Aligned_cols=95 Identities=8% Similarity=0.060 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCCC
Q 006566 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNFA 193 (640)
Q Consensus 117 v~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~--~v~KVRINPGN~~ 193 (640)
.+.+++-+++|.+.|. . |-=| ..+.+.+..+++ .+++|+.+|=.+ ++.-+..+++ .++-|.|.|+..|
T Consensus 223 ~~~A~~~~~~L~~~~i-~--iEeP-~~~~~~~~~l~~-----~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~G 293 (391)
T 4e8g_A 223 SRDALRLSRECPEIPF-V--LEQP-CNTLEEIAAIRG-----RVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIG 293 (391)
T ss_dssp HHHHHHHHHHCTTSCE-E--EESC-SSSHHHHHHHGG-----GCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHT
T ss_pred HHHHHHHHHHHhhcCe-E--EecC-CccHHHHHHHHh-----hCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccC
Confidence 3444444444444432 2 3333 234445555554 478999999654 5655666664 4999999999998
Q ss_pred chhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCC
Q 006566 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (640)
Q Consensus 194 d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGS 242 (640)
.-.. ...+...|+++|+++=+|.+.+|
T Consensus 294 Git~----------------------~~~ia~~A~~~gi~~~~~~~~es 320 (391)
T 4e8g_A 294 GLQQ----------------------MAAFRDICEARALPHSCDDAWGG 320 (391)
T ss_dssp SHHH----------------------HHHHHHHHHHTTCCEEEECSSCS
T ss_pred CHHH----------------------HHHHHHHHHHcCCeEEeCCcCCC
Confidence 7432 67799999999999988865543
No 257
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=74.38 E-value=9.5 Score=39.48 Aligned_cols=66 Identities=12% Similarity=0.138 Sum_probs=48.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC--CH-HHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQ--GK-READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFD 183 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp--~~-~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~ 183 (640)
.|.+..++++.++.++|.+.|.+-+- +. .+.+.++.|++. -|.++||..|.| |++.-|...++.++
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a---~g~~~~l~vDan~~~~~~~a~~~~~~l~ 214 (378)
T 2qdd_A 144 GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAG---LPDGHRVTFDVNRAWTPAIAVEVLNSVR 214 (378)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHS---CCTTCEEEEECTTCCCHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHH---hCCCCEEEEeCCCCCCHHHHHHHHHHhC
Confidence 57788999999999999999998765 33 456777777764 356899999988 45554544444444
No 258
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=74.37 E-value=57 Score=32.56 Aligned_cols=144 Identities=13% Similarity=0.149 Sum_probs=76.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCHHH-------HHHHHHHHHHhhcC-CCC-ccee-ec-cCCCHHHHHHHhhh-
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQGKRE-------ADACFEIKNSLVQK-NYN-IPLV-AD-IHFAPSVALRVAEC- 181 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~-------A~~l~~I~~~L~~~-g~~-iPLV-AD-IHF~~~~Al~Aa~~- 181 (640)
.+.++..+++++.+.+.|+.-|.++-++.-. .+.+.++-+.|++. |.. +=+. +. -.+++.++..-++.
T Consensus 32 ~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~~ir~~~~~p~~l~~e~l~~l~~~g 111 (304)
T 2qgq_A 32 SRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISAMLELD 111 (304)
T ss_dssp BCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSCEEEECCCCGGGCCHHHHHHHHHCT
T ss_pred eeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhcCCCcEEEEeeeecccCCHHHHHHHHhCC
Confidence 4578999999999999999999988654321 23466666666554 332 1111 11 12455555443332
Q ss_pred --cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHH--cCCeEEEeeCCCCCcHhHHHHhCCChHH
Q 006566 182 --FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKK--YGRAVRIGTNHGSLSDRIMSYYGDSPRG 257 (640)
Q Consensus 182 --v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke--~g~aIRIGvNhGSLs~ril~ryGdtp~g 257 (640)
+.-|-|..-..-++--+.-...||- +.+...++.+++ .|+.++..+=-|= -|.|.
T Consensus 112 ~~~~~l~i~lqs~s~~vl~~m~r~~t~-----------e~~~~~i~~l~~~~~gi~i~~~~IvG~--------PgEt~-- 170 (304)
T 2qgq_A 112 KVVKYFDVPVQHGSDKILKLMGRTKSS-----------EELKKMLSSIRERFPDAVLRTSIIVGF--------PGETE-- 170 (304)
T ss_dssp TBCCEEECCCBCSCHHHHHHTTCCSCH-----------HHHHHHHHHHHHHCTTCEEEEEEEECC--------TTCCH--
T ss_pred CCccEEEEecccCCHHHHHHhCCCCCH-----------HHHHHHHHHHHhhCCCCEEEEEEEEeC--------CCCCH--
Confidence 3334443333322111111122332 335556666666 6777765542331 14565
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEE
Q 006566 258 MVESAFEFARICRKLDFHNFLFS 280 (640)
Q Consensus 258 MVeSAle~~~i~e~~~F~diviS 280 (640)
|...+.++.+++++|+.+-+.
T Consensus 171 --ed~~~t~~~l~~l~~~~v~~~ 191 (304)
T 2qgq_A 171 --EDFEELKQFVEEIQFDKLGAF 191 (304)
T ss_dssp --HHHHHHHHHHHHHCCSEEEEE
T ss_pred --HHHHHHHHHHHHcCCCEEEEE
Confidence 334455666778888766554
No 259
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=74.33 E-value=9 Score=39.99 Aligned_cols=68 Identities=12% Similarity=0.323 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecC-----C----------------HHHHHHHHHHHHHhhcCCCCcceeeccC--CCH
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQ-----G----------------KREADACFEIKNSLVQKNYNIPLVADIH--FAP 172 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp-----~----------------~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~ 172 (640)
|.+..++++.++.++|.+-|.+-+- + ..+.+.++.|++. -|.++||..|.| |++
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a---~G~d~~l~vDan~~~~~ 228 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDA---VGPDVDIIAEMHAFTDT 228 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHH---HCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHh---cCCCCEEEEECCCCCCH
Confidence 7899999999999999999999752 3 2355667777764 377899999998 456
Q ss_pred HHHHHHhhhcCcee
Q 006566 173 SVALRVAECFDKIR 186 (640)
Q Consensus 173 ~~Al~Aa~~v~KVR 186 (640)
.-|...++.+++..
T Consensus 229 ~~a~~~~~~l~~~~ 242 (407)
T 2o56_A 229 TSAIQFGRMIEELG 242 (407)
T ss_dssp HHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHhcC
Confidence 66666666666543
No 260
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=74.29 E-value=4.2 Score=38.02 Aligned_cols=61 Identities=13% Similarity=0.310 Sum_probs=45.6
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCC
Q 006566 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGN 191 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN 191 (640)
.+|+....++|+|+| +. |+.. .+.++..++ +.+|+++++| ++.-+..|.+. ++-|-++|++
T Consensus 73 ~~~~~~a~~~Gad~i-v~-~~~~-~~~~~~~~~------~g~~vi~g~~-t~~e~~~a~~~Gad~vk~~~~~ 134 (205)
T 1wa3_A 73 VEQCRKAVESGAEFI-VS-PHLD-EEISQFCKE------KGVFYMPGVM-TPTELVKAMKLGHTILKLFPGE 134 (205)
T ss_dssp HHHHHHHHHHTCSEE-EC-SSCC-HHHHHHHHH------HTCEEECEEC-SHHHHHHHHHTTCCEEEETTHH
T ss_pred HHHHHHHHHcCCCEE-Ec-CCCC-HHHHHHHHH------cCCcEECCcC-CHHHHHHHHHcCCCEEEEcCcc
Confidence 457888889999999 54 5443 344444443 6799999997 68878888888 9999998853
No 261
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=74.28 E-value=8 Score=40.40 Aligned_cols=68 Identities=13% Similarity=0.208 Sum_probs=50.7
Q ss_pred CCCHHHHHHHHHHHHHc-CCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCc
Q 006566 114 TKDVAGTVEEVMRIADQ-GADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDK 184 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~a-GceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~K 184 (640)
..+.+..++++.+..+. |...+.+-+-. .++.+.++.|++. -|-++||..|.| |++.-|+..++.+++
T Consensus 146 ~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a---~g~~~~l~vDan~~~~~~~A~~~~~~l~~ 219 (383)
T 3i4k_A 146 VLPLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELARE---VGDRVSLRIDINARWDRRTALHYLPILAE 219 (383)
T ss_dssp SCCHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHT---TTTTSEEEEECTTCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHH---cCCCCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 45789999999999888 99999998744 5667777777764 366799999998 555555555554444
No 262
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=73.98 E-value=9.4 Score=39.89 Aligned_cols=69 Identities=17% Similarity=0.326 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecC-----C---------------------HHHHHHHHHHHHHhhcCCCCcceeeccC
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQ-----G---------------------KREADACFEIKNSLVQKNYNIPLVADIH 169 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp-----~---------------------~~~A~~l~~I~~~L~~~g~~iPLVADIH 169 (640)
|.+..++++.+..++|.+-|.+-+- + ..+.+.++.|++. -|.++||..|.|
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a---~G~d~~l~vDan 226 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREA---MGDDADIIVEIH 226 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHH---HCSSSEEEEECT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHh---cCCCCEEEEECC
Confidence 8899999999999999999999752 3 2355666666664 377899999998
Q ss_pred --CCHHHHHHHhhhcCceee
Q 006566 170 --FAPSVALRVAECFDKIRV 187 (640)
Q Consensus 170 --F~~~~Al~Aa~~v~KVRI 187 (640)
|++.-|...++.+++..|
T Consensus 227 ~~~~~~~ai~~~~~l~~~~i 246 (410)
T 2gl5_A 227 SLLGTNSAIQFAKAIEKYRI 246 (410)
T ss_dssp TCSCHHHHHHHHHHHGGGCE
T ss_pred CCCCHHHHHHHHHHHHhcCC
Confidence 556666666666665433
No 263
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=73.61 E-value=9.5 Score=42.74 Aligned_cols=102 Identities=15% Similarity=0.190 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC---CHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCcee--eCCCC
Q 006566 118 AGTVEEVMRIADQGADLVRITVQ---GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIR--VNPGN 191 (640)
Q Consensus 118 ~atv~Qi~rl~~aGceiVRvtvp---~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVR--INPGN 191 (640)
+.+.+.+..|.+||+|++=|-+- +..-.+.++.||+. .-++|+||=-=-++..|..-+++ +|.|+ |-||-
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~----~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGS 355 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQT----YPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGS 355 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHH----CTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCST
T ss_pred ccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhh----CCcceEEeccccCHHHHHHHHHcCCCEEeecCCCCc
Confidence 45788999999999999877644 34556777777775 34699999888889999998898 88888 78887
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
+--.+.. .-.-+- --..+.++.+.|+++|+||
T Consensus 356 iCtTr~v-~GvG~P----------Q~tAi~~~a~~a~~~~vpv 387 (556)
T 4af0_A 356 ICITQEV-MAVGRP----------QGTAVYAVAEFASRFGIPC 387 (556)
T ss_dssp TBCCTTT-CCSCCC----------HHHHHHHHHHHHGGGTCCE
T ss_pred ccccccc-cCCCCc----------HHHHHHHHHHHHHHcCCCE
Confidence 6432210 000000 0113556778889999998
No 264
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=73.46 E-value=14 Score=38.48 Aligned_cols=68 Identities=13% Similarity=0.282 Sum_probs=51.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCcee
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIR 186 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KVR 186 (640)
+.+..++++.++.++|.+.|.+-+-. ..+.+.++.|++.+ |-++||..|.| |++.-|...++.+++..
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~av---g~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 234 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL---GDAVPLMVDANQQWDRPTAQRMCRIFEPFN 234 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHH---CTTSCEEEECTTCCCHHHHHHHHHHHGGGC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHc---CCCCEEEEECCCCCCHHHHHHHHHHHHhhC
Confidence 88999999999999999999997653 34566677777653 67899999988 56666666666566543
No 265
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=73.40 E-value=8.9 Score=39.44 Aligned_cols=69 Identities=13% Similarity=0.278 Sum_probs=51.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC-C-HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHH-HHhhhcCcee
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQ-G-KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVAL-RVAECFDKIR 186 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp-~-~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al-~Aa~~v~KVR 186 (640)
.|.+..++++.++.++|.+.+.+-+- + ..+.+.++.|++.+ |.++||..|.| |++.-|. ..++.+++..
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~---g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~ 213 (369)
T 2p8b_A 140 ADPENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRIEAVRERV---GNDIAIRVDVNQGWKNSANTLTALRSLGHLN 213 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHH---CTTSEEEEECTTTTBSHHHHHHHHHTSTTSC
T ss_pred CChHHHHHHHHHHHHcCcCEEEEEeCCCHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 36788899999999999999999764 2 34667777777753 66899999988 5566666 6666666643
No 266
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=73.39 E-value=14 Score=39.75 Aligned_cols=114 Identities=14% Similarity=0.185 Sum_probs=77.2
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al 176 (640)
+|.+-+++|= .| ..-+.+.+++-+++|.+.|.+.+===++ .++.+.+.+++++|. .+++|+.+|=++ ++.-+.
T Consensus 242 ~G~~~~l~vD--aN-~~~~~~~A~~~~~~L~~~~~~~iEeP~~-~~d~~~~~~l~~~l~--~~~iPIa~gE~~~~~~~~~ 315 (441)
T 4a35_A 242 IGPEKTLMMD--AN-QRWDVPEAVEWMSKLAKFKPLWIEEPTS-PDDILGHATISKALV--PLGIGIATGEQCHNRVIFK 315 (441)
T ss_dssp HCTTSEEEEE--CT-TCCCHHHHHHHHHHHGGGCCSEEECCSC-TTCHHHHHHHHHHHG--GGTCEEEECTTCCSHHHHH
T ss_pred hCCCCeEEEE--CC-CCCCHHHHHHHHHhhcccCccEEeCCCC-cccHHHHHHHHHhcc--CCCCCEEeCCccccHHHHH
Confidence 4556666653 11 1235666777777777777766643333 345677777877543 267999999654 555555
Q ss_pred HHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCC
Q 006566 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (640)
Q Consensus 177 ~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGS 242 (640)
.+++ +++-|.+.|+..|.-.. ...+...|+++|+++ .-|++
T Consensus 316 ~~l~~~a~div~~d~~~~GGit~----------------------~~kia~lA~~~gv~v---~~H~~ 358 (441)
T 4a35_A 316 QLLQAKALQFLQIDSCRLGSVNE----------------------NLSVLLMAKKFEIPV---CPHAG 358 (441)
T ss_dssp HHHHTTCCSEECCCTTTSSHHHH----------------------HHHHHHHHHHTTCCB---CCCCC
T ss_pred HHHHcCCCCEEEECccccCCHHH----------------------HHHHHHHHHHcCCEE---EEeCC
Confidence 5655 49999999999997442 678999999999998 45643
No 267
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=73.32 E-value=13 Score=38.71 Aligned_cols=65 Identities=14% Similarity=0.343 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 118 AGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 118 ~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
+..++++.++.++|.+.|.+-+-. ..+.+.++.|++.+ |.++||..|.| |++.-|...++.+++.
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~---G~d~~l~vDan~~~~~~~a~~~~~~l~~~ 210 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA---GSSITMILDANQSYDAAAAFKWERYFSEW 210 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---CTTSEEEEECTTCCCHHHHHTTHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh---CCCCEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 888999999999999999998743 45677888888753 67899999988 4555555555555554
No 268
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=73.15 E-value=8 Score=40.16 Aligned_cols=69 Identities=13% Similarity=0.296 Sum_probs=53.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~--~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
-.+.+..++++.++.+.|...+.+-+-. .++.+.++.|++. -|-++||..|.| |++.-|+..++.+++.
T Consensus 138 ~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~---~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~ 210 (368)
T 3q45_A 138 IDEPHKMAADAVQIKKNGFEIIKVKVGGSKELDVERIRMIREA---AGDSITLRIDANQGWSVETAIETLTLLEPY 210 (368)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHH---HCSSSEEEEECTTCBCHHHHHHHHHHHGGG
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEecCCHHHHHHHHHHHHHH---hCCCCeEEEECCCCCChHHHHHHHHHHhhc
Confidence 3578999999999999999999998643 5778888888875 356899999987 5566666666666553
No 269
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=72.95 E-value=7.6 Score=40.70 Aligned_cols=68 Identities=13% Similarity=0.262 Sum_probs=52.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCc
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDK 184 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~--~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~K 184 (640)
-.+.+..++++.++.+.|...+.+-+-. .++.+.++.||+.+ |-++||..|.| |++.-|...++.+++
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~---g~d~~l~vDan~~~~~~~A~~~~~~l~~ 220 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRV---GADVEILVDANQSLGRHDALAMLRILDE 220 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH---CTTSEEEEECTTCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHc---CCCceEEEECCCCcCHHHHHHHHHHHHh
Confidence 4678999999999999999999998743 56777788888753 56799999988 566666655555554
No 270
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=72.95 E-value=5.8 Score=41.77 Aligned_cols=85 Identities=14% Similarity=0.286 Sum_probs=57.7
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC--C------------------------HHHHHHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ--G------------------------KREADACFEI 151 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp--~------------------------~~~A~~l~~I 151 (640)
+||..+=+|...++....+.+..++++++..+.|...+.+-+- + .++.+.++.|
T Consensus 115 LGG~~r~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~av 194 (401)
T 3sbf_A 115 FGGKSRDAIPVYTHATSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSL 194 (401)
T ss_dssp HTCCSSSSEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHH
T ss_pred hCCCcCCeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHH
Confidence 5664322222222333467899999999999999999998751 1 2456667777
Q ss_pred HHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 152 KNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 152 ~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
|+. -|-++||..|.| |++.-|+..++.+++.
T Consensus 195 R~a---~G~d~~l~vDan~~~~~~~A~~~~~~L~~~ 227 (401)
T 3sbf_A 195 REK---YGNQFHILHDVHERLFPNQAIQFAKEVEQY 227 (401)
T ss_dssp HHH---HTTSSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred HHH---cCCCCEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 774 366899999998 5666666666666654
No 271
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=72.94 E-value=11 Score=39.38 Aligned_cols=67 Identities=18% Similarity=0.200 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCC-----------HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCc
Q 006566 118 AGTVEEVMRIADQGADLVRITVQG-----------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDK 184 (640)
Q Consensus 118 ~atv~Qi~rl~~aGceiVRvtvp~-----------~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~K 184 (640)
+..++++.+..++|.+-+.+-+-. ..+.+.++.|++. -|.++||..|.| |++.-|...++.+++
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~---~g~d~~l~vDan~~~~~~~ai~~~~~l~~ 226 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEV---AGPAGKIMIDANNAYNLNLTKEVLAALSD 226 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHH---HCTTCCEEEECTTCCCHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHH---hCCCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 778899999999999999998764 3455666666664 377899999998 566666666666776
Q ss_pred eee
Q 006566 185 IRV 187 (640)
Q Consensus 185 VRI 187 (640)
.+|
T Consensus 227 ~~i 229 (392)
T 3p3b_A 227 VNL 229 (392)
T ss_dssp SCE
T ss_pred cCC
Confidence 543
No 272
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=72.87 E-value=6.3 Score=42.01 Aligned_cols=86 Identities=13% Similarity=0.309 Sum_probs=59.1
Q ss_pred ecCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC--C------------------------HHHHHHHHH
Q 006566 97 AIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ--G------------------------KREADACFE 150 (640)
Q Consensus 97 ~IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp--~------------------------~~~A~~l~~ 150 (640)
.+||..+=+|...++....+.+..+++++++.+.|...+.+-+- + .++.+.++.
T Consensus 135 LLGG~~r~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~a 214 (422)
T 3tji_A 135 LFGGKSRDAIPAYSHASGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHA 214 (422)
T ss_dssp HTTCCSSSCEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHH
T ss_pred HcCCCCCCeEEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHH
Confidence 35775332333333334567899999999999999999998751 1 235666777
Q ss_pred HHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 151 IKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 151 I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
||+. -|-++||..|.| |++.-|+..++.+++.
T Consensus 215 vR~a---vG~d~~L~vDaN~~~~~~~A~~~~~~Le~~ 248 (422)
T 3tji_A 215 LREK---YGWKLHILHDVHERLFPQQAVQLAKQLEPF 248 (422)
T ss_dssp HHHH---HCSSSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred HHHH---cCCCCEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 7764 367899999998 5666666666666654
No 273
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=72.80 E-value=14 Score=39.90 Aligned_cols=99 Identities=13% Similarity=0.076 Sum_probs=76.3
Q ss_pred CCHHHHHHHHHHHH-HcCCCEEEEecC-CHHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhh--cCceeeC
Q 006566 115 KDVAGTVEEVMRIA-DQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAEC--FDKIRVN 188 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~-~aGceiVRvtvp-~~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~--v~KVRIN 188 (640)
.+.+..++.+.++. +. .|+-|-=| ..++-+.++.++++ .++||++|=- ++|.-+..+++. ++-|.|.
T Consensus 270 ~t~~e~~~~~~~ll~~y--~i~~IEdPl~~dD~~g~~~L~~~-----~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iK 342 (439)
T 2akz_A 270 ITGDQLGALYQDFVRDY--PVVSIEDPFDQDDWAAWSKFTAN-----VGIQIVGDDLTVTNPKRIERAVEEKACNCLLLK 342 (439)
T ss_dssp BCHHHHHHHHHHHHHHS--CEEEEECCSCTTCHHHHHHHHHT-----CSSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC
T ss_pred CCHHHHHHHHHHHHHhC--CCcEEECCCCcccHHHHHHHHhC-----CCCEEEeCCCccCCHHHHHHHHHhCCCCEEEec
Confidence 35666777777654 45 48888766 55678889999884 8899999975 489888888875 9999999
Q ss_pred CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCC
Q 006566 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (640)
Q Consensus 189 PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGS 242 (640)
|..+|.=.. ..++++.|+++|+.+=+|-.+|.
T Consensus 343 v~qiGGite----------------------a~~ia~lA~~~g~~~~~sh~~gE 374 (439)
T 2akz_A 343 VNQIGSVTE----------------------AIQACKLAQENGWGVMVSHRSGE 374 (439)
T ss_dssp HHHHCCHHH----------------------HHHHHHHHHHTTCEEEEECCSBC
T ss_pred hhhcCCHHH----------------------HHHHHHHHHHCCCeEEeecCCCc
Confidence 999988442 67789999999998766644444
No 274
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=72.73 E-value=3.3 Score=39.91 Aligned_cols=171 Identities=9% Similarity=0.073 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCHHH---HHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cCceeeCCCCCC
Q 006566 119 GTVEEVMRIADQGADLVRITVQGKRE---ADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDKIRVNPGNFA 193 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvtvp~~~~---A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~KVRINPGN~~ 193 (640)
..++.++++.++|++.+=++-++... -.++..|++ ++ .+++|+++.--+ ++.-+..+++. +++|=+.-..+.
T Consensus 31 ~~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~-i~--~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 107 (241)
T 1qo2_A 31 DPVELVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEK-LS--EFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLE 107 (241)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEHHHHHHCCCTTHHHHHH-GG--GGGGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecccccccCCchhHHHHHH-HH--hcCCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhh
Confidence 35677888999999998887432211 123444443 33 378999985443 46677777777 888844332222
Q ss_pred chhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCC
Q 006566 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD 273 (640)
Q Consensus 194 d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~ 273 (640)
+++ .+-+. +++|-.+.+|+..-- .++.- .|-.. .--.+..|+++.+++.|
T Consensus 108 ~p~-------------------------~~~~~-~~~g~~i~~~~d~~~--~~v~~-~g~~~-~~~~~~~e~~~~~~~~G 157 (241)
T 1qo2_A 108 DPS-------------------------FLKSL-REIDVEPVFSLDTRG--GRVAF-KGWLA-EEEIDPVSLLKRLKEYG 157 (241)
T ss_dssp CTT-------------------------HHHHH-HTTTCEEEEEEEEET--TEECC-TTCSS-CSCCCHHHHHHHHHTTT
T ss_pred ChH-------------------------HHHHH-HHcCCcEEEEEEecC--CEEEE-CCcee-cCCCCHHHHHHHHHhCC
Confidence 211 12233 556656777763210 01111 12100 00014567788888899
Q ss_pred CCcEEEEEEeCCh---hhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHHHHHHHhhh
Q 006566 274 FHNFLFSMKASNP---VVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQD 336 (640)
Q Consensus 274 F~diviSmKsSn~---~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAiGIG~LL~D 336 (640)
+.-|.+.=-..+- ..-.+.++.+.+. .+.|+--+ |=|.+.-.+-.|+.-
T Consensus 158 ~~~i~~t~~~~~g~~~g~~~~~i~~l~~~-----~~iPvia~---------GGI~~~~d~~~~~~~ 209 (241)
T 1qo2_A 158 LEEIVHTEIEKDGTLQEHDFSLTKKIAIE-----AEVKVLAA---------GGISSENSLKTAQKV 209 (241)
T ss_dssp CCEEEEEETTHHHHTCCCCHHHHHHHHHH-----HTCEEEEE---------SSCCSHHHHHHHHHH
T ss_pred CCEEEEEeecccccCCcCCHHHHHHHHHh-----cCCcEEEE---------CCCCCHHHHHHHHhc
Confidence 9988884311110 0125666777766 46787431 345555555555543
No 275
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=72.66 E-value=8.1 Score=39.74 Aligned_cols=68 Identities=7% Similarity=0.181 Sum_probs=50.7
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEEecC--CH-HHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 115 KDVAGTVEEVMRIAD-QGADLVRITVQ--GK-READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~-aGceiVRvtvp--~~-~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.|.+..++++.+..+ +|.+.+.+-+- +. ++.+.++.|++.+ |-++||..|.| |++.-|...++.+++.
T Consensus 141 ~~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 214 (370)
T 1nu5_A 141 GDTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---GDRASVRVDVNQGWDEQTASIWIPRLEEA 214 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---GGGCEEEEECTTCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc---CCCCEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 467889999999999 99999998764 33 4667888888753 55789999987 5566665555555553
No 276
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=72.61 E-value=10 Score=39.67 Aligned_cols=107 Identities=16% Similarity=0.173 Sum_probs=75.9
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC-CCHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH-FAPSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH-F~~~~Al 176 (640)
+|.+-+++|=- |. .-|.+.+++-+++|.+.|.+.+===++-.++.+.++.++++ +++||.+|=+ +++.-+.
T Consensus 206 ~G~~~~l~vDa--N~-~~~~~~A~~~~~~l~~~~~~~iEeP~~~~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 277 (388)
T 4h83_A 206 AGDDFIICIDA--NQ-GYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQ-----GSVPVCAGQTEFSASGCR 277 (388)
T ss_dssp HCSSSEEEEEC--TT-CBCHHHHHHHHHHTTTSCCCCEESCBCSTTHHHHHHHHHHH-----SSSCEEECTTCSSHHHHH
T ss_pred cCCCeEEEEec--Cc-CCCHHHHHHHHHHhhhcCcceeecCcccccchHHHHHHHhh-----cCCCccCCccccChHhHH
Confidence 55666666532 21 23677777888888888877654444445677888888885 8999999955 4565555
Q ss_pred HHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 177 RVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 177 ~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
..++. +|=|.+.++..|.-.. ...+...|+.+|+++
T Consensus 278 ~~i~~~a~d~i~~d~~~~GGit~----------------------~~kia~~A~~~gv~v 315 (388)
T 4h83_A 278 DLMETGAIDVCNFDSSWSGGPTA----------------------WLRTAAIATSYDVQM 315 (388)
T ss_dssp HHHHHTCCSEECCCGGGTTCHHH----------------------HHHHHHHHHHTTCEE
T ss_pred HHHHcCCCCeEeecceeCCCHHH----------------------HHHHHHHHHHCCCEE
Confidence 66554 8989999999987332 677889999999865
No 277
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=72.18 E-value=9.2 Score=40.36 Aligned_cols=85 Identities=15% Similarity=0.261 Sum_probs=61.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC--------------------------HHHHHHHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG--------------------------KREADACFEI 151 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~--------------------------~~~A~~l~~I 151 (640)
+||...=+|...++....+.+..++++.++.+.|...+++-+-. .++.+.++.|
T Consensus 135 LGG~~r~~v~~y~~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~av 214 (421)
T 4hnl_A 135 LGGKARTAIPAYTHAVADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAI 214 (421)
T ss_dssp TTCCSSSCEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHH
T ss_pred cCCccCcccceecccCCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHH
Confidence 56654434444444445678999999999999999999987632 3466777777
Q ss_pred HHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 152 KNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 152 ~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
++. -|-+++|..|.| |++.-|+..++.+++.
T Consensus 215 R~a---~G~~~~l~vDan~~~~~~~A~~~~~~l~~~ 247 (421)
T 4hnl_A 215 KEK---YGNQFQMLHDVHERLHPNQAIQFAKAAEPY 247 (421)
T ss_dssp HHH---HTTSSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred HHH---hCCCceEeccccccCCHHHHHHHHHHhhhh
Confidence 775 377899999987 5666677766666654
No 278
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=72.16 E-value=5.3 Score=41.06 Aligned_cols=101 Identities=15% Similarity=0.174 Sum_probs=70.5
Q ss_pred cCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC-HHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHHHHhhhcCceee
Q 006566 110 TTNDTKDVAGTVEEVMRIADQGADLVRITVQG-KREADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAECFDKIRV 187 (640)
Q Consensus 110 t~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~-~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al~Aa~~v~KVRI 187 (640)
.|..-.|.+.+++-+++|.+.|.+.+ -=|= .++-+.+++++++ +++|+.+|=++. +.-+..++..++-|.+
T Consensus 180 aN~~~t~~~~A~~~~~~l~~~~i~~i--EeP~~~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~~~a~d~i~~ 252 (338)
T 3ijl_A 180 ANQGWKDRQYALDMIHWLKEKGIVMI--EQPMPKEQLDDIAWVTQQ-----SPLPVFADESLQRLGDVAALKGAFTGINI 252 (338)
T ss_dssp CTTCCCCHHHHHHHHHHHHHTTEEEE--ECCSCTTCHHHHHHHHHT-----CSSCEEESTTCCSGGGTGGGBTTBSEEEE
T ss_pred CcCCCCCHHHHHHHHHHHhhCCCCEE--ECCCCCCcHHHHHHHHhc-----CCCCEEECCCCCCHHHHHHHHhhCCEEEe
Confidence 34444477888888888888775443 3232 2346778888874 889999995443 3323334466888999
Q ss_pred CCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeC
Q 006566 188 NPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTN 239 (640)
Q Consensus 188 NPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvN 239 (640)
.|+..|.-.. ...+...|+++|+++=+|..
T Consensus 253 k~~~~GGit~----------------------~~~ia~~A~~~gi~~~~~~~ 282 (338)
T 3ijl_A 253 KLMKCTGMRE----------------------AWKMVTLAHALGMRVMVGCM 282 (338)
T ss_dssp CHHHHTSHHH----------------------HHHHHHHHHHTTCEEEECCC
T ss_pred cccccCCHHH----------------------HHHHHHHHHHcCCEEEecCC
Confidence 9999887442 67889999999999977653
No 279
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=72.04 E-value=16 Score=39.30 Aligned_cols=104 Identities=13% Similarity=0.160 Sum_probs=79.4
Q ss_pred CHHHHHHHHHH-HHHcCCCEEEEecC-CHHHHHHHHHHHHHhhcCCCCcceeeccCCC--HHHHHHHhhh--cCceeeCC
Q 006566 116 DVAGTVEEVMR-IADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAEC--FDKIRVNP 189 (640)
Q Consensus 116 Dv~atv~Qi~r-l~~aGceiVRvtvp-~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~--~~~Al~Aa~~--v~KVRINP 189 (640)
+.+..++-.++ +.+.+ |+=|-=| ..++-+.++.+++++ |.++||++|=.|. |+-...+++. ++-|.|-+
T Consensus 262 t~~eai~~~~~ll~~y~--i~~IEdPl~~dD~e~~~~L~~~~---g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv 336 (417)
T 3qn3_A 262 SSEALIERYVELCAKYP--ICSIEDGLAENDFEGWIKLTEKL---GNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKP 336 (417)
T ss_dssp CHHHHHHHHHHHHHHSC--EEEEESSSCTTCHHHHHHHHHHH---TTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECH
T ss_pred CHHHHHHHHHHHHhhcc--eeEEecCCCcccHHHHHHHHHhh---CCCCceecCCcccCCHHHHHHHHHhCCCCEEEecC
Confidence 46777777777 66665 7777644 345788899998863 3479999997654 8777777664 99999999
Q ss_pred CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHh
Q 006566 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDR 246 (640)
Q Consensus 190 GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~r 246 (640)
..+|.-.. ..++++.|+++|+.+=||-.+|.-++.
T Consensus 337 ~qiGGiTe----------------------a~kia~lA~~~G~~v~vsh~sgEt~d~ 371 (417)
T 3qn3_A 337 NQIGTITQ----------------------TMRTVRLAQRNNYKCVMSHRSGESEDA 371 (417)
T ss_dssp HHHCSHHH----------------------HHHHHHHHHHTTCEEEEECCSSCCSCC
T ss_pred CCCCCHHH----------------------HHHHHHHHHHcCCeEEEeCCCCCchHH
Confidence 99997432 677899999999998888888876554
No 280
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=71.85 E-value=4.5 Score=41.68 Aligned_cols=62 Identities=16% Similarity=0.142 Sum_probs=43.7
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeC
Q 006566 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVN 188 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRIN 188 (640)
++.+..+.++|+|.| -+... ..++++.+.+++.+..+|+|+|+|=- .=|+.|++. ++-|++|
T Consensus 90 ide~qil~aaGAD~I-d~s~~----~~~~~li~~i~~~~~g~~vvv~v~~~-~Ea~~a~~~Gad~I~v~ 152 (297)
T 4adt_A 90 FVEAQILEELKVDML-DESEV----LTMADEYNHINKHKFKTPFVCGCTNL-GEALRRISEGASMIRTK 152 (297)
T ss_dssp HHHHHHHHHTTCSEE-EEETT----SCCSCSSCCCCGGGCSSCEEEEESSH-HHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEE-EcCCC----CCHHHHHHHHHhcCCCCeEEEEeCCH-HHHHHHHhCCCCEEEEC
Confidence 677888889999999 33222 12334445555556789999999854 446677776 9999999
No 281
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=71.76 E-value=10 Score=41.20 Aligned_cols=49 Identities=27% Similarity=0.423 Sum_probs=38.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceee
Q 006566 113 DTKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVA 166 (640)
Q Consensus 113 ~T~Dv~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVA 166 (640)
.|-+.+...+...++.+.||||||+++. +.+|...|-+...+ .++|+||
T Consensus 129 ~tp~~~~~~~~~~~~~~~gaDivKia~~a~~~~D~~~l~~~~~~-----~~~p~i~ 179 (523)
T 2o7s_A 129 NTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSK-----AQVPTIG 179 (523)
T ss_dssp CCCCHHHHHHHHHHHHTTTCSEEEEEEECSSGGGHHHHHHHHHH-----CSSCEEE
T ss_pred CCcCHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHHHHHHhh-----cCCCEEE
Confidence 3446688888999999999999999965 55677777776664 4688877
No 282
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=71.64 E-value=21 Score=37.10 Aligned_cols=68 Identities=9% Similarity=0.159 Sum_probs=52.9
Q ss_pred CCHHHHHHHHHHHHHc-CCCEEEEecC--C-HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 115 KDVAGTVEEVMRIADQ-GADLVRITVQ--G-KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~a-GceiVRvtvp--~-~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.+.+..++++.+..+. |...+.+-+- + .++.+.++.|++. -|-++||..|.| |++.-|+..++.+++.
T Consensus 150 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~---~g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 223 (372)
T 3tj4_A 150 FTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRER---VDSAVRIAIDGNGKWDLPTCQRFCAAAKDL 223 (372)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHH---SCTTCEEEEECTTCCCHHHHHHHHHHTTTS
T ss_pred CCHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHH---cCCCCcEEeeCCCCCCHHHHHHHHHHHhhc
Confidence 3789999999999999 9999999874 3 4677788888874 356899999988 5566666666666654
No 283
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=71.55 E-value=15 Score=38.32 Aligned_cols=68 Identities=15% Similarity=0.249 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.+.+..+++++++.++|.+.+.+-+-. ..+.+.++.|++.+ |.++||..|.| |++.-|...++.+++.
T Consensus 164 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 236 (392)
T 1tzz_A 164 KGLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI---GKDAQLAVDANGRFNLETGIAYAKMLRDY 236 (392)
T ss_dssp -CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH---TTTCEEEEECTTCCCHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc---CCCCeEEEECCCCCCHHHHHHHHHHHHHc
Confidence 378999999999999999999987653 34667788888753 66899999988 5566666666666654
No 284
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=71.37 E-value=22 Score=36.78 Aligned_cols=213 Identities=12% Similarity=0.109 Sum_probs=130.5
Q ss_pred eEEEceeecCCCCceEEEeccCCCCC----CHHHHHHHHHHHHHcCCCEEEEe----------------cCCHHHHHHHH
Q 006566 90 TVMVGNVAIGSEHPIRVQTMTTNDTK----DVAGTVEEVMRIADQGADLVRIT----------------VQGKREADACF 149 (640)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T~----Dv~atv~Qi~rl~~aGceiVRvt----------------vp~~~~A~~l~ 149 (640)
.++||++.+ .|-|..-.||+.... =++..++--.+.++-|+-+|=.- .-+.+..+.++
T Consensus 7 p~~ig~~~l--~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~ 84 (349)
T 3hgj_A 7 PLELGGLRL--KNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLK 84 (349)
T ss_dssp CEEETTEEE--SSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHHH
T ss_pred CeeECCEEe--cCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHHHHH
Confidence 477888887 688999999875432 25666666777777777666321 12446788999
Q ss_pred HHHHHhhcCCCCcceeeccCCCHHHHHHHhhhc-----CceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHH
Q 006566 150 EIKNSLVQKNYNIPLVADIHFAPSVALRVAECF-----DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLV 224 (640)
Q Consensus 150 ~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v-----~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV 224 (640)
+|.+..++.|..+ ++=++-.-+.+.....+. ..--+-|-.+......-.-.+.|. +|++.|.+.|..-.
T Consensus 85 ~~~~~vh~~G~~i--~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~----~eI~~ii~~f~~aA 158 (349)
T 3hgj_A 85 ELARRIREAGAVP--GIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDE----AGMERILQAFVEGA 158 (349)
T ss_dssp HHHHHHHHTTCEE--EEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCeE--EEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccCCH----HHHHHHHHHHHHHH
Confidence 9999999888753 433332222211000000 000122332221110001234553 56778888999999
Q ss_pred HHHHHcCC-eEEEeeCCCCCcHhHHH--------HhCCChHHHHHHHHHHHHHHHH-CCCCcEEEEEEeCCh-----hhH
Q 006566 225 EKCKKYGR-AVRIGTNHGSLSDRIMS--------YYGDSPRGMVESAFEFARICRK-LDFHNFLFSMKASNP-----VVM 289 (640)
Q Consensus 225 ~~~Ke~g~-aIRIGvNhGSLs~ril~--------ryGdtp~gMVeSAle~~~i~e~-~~F~diviSmKsSn~-----~~m 289 (640)
+.|++.|. .|-|=.-||-|-+.+++ +||.+.+.=..-++|-++-+++ .| .++.|++|-|-. -..
T Consensus 159 ~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG-~d~pV~vRls~~~~~~~g~~ 237 (349)
T 3hgj_A 159 RRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVP-RELPLFVRVSATDWGEGGWS 237 (349)
T ss_dssp HHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSC-TTSCEEEEEESCCCSTTSCC
T ss_pred HHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhc-CCceEEEEeccccccCCCCC
Confidence 99999885 56777778877665554 5777766666667777765544 44 455677777631 123
Q ss_pred HHHHHHHHHHHHHcCCCcceEEE
Q 006566 290 VQAYRLLVAEMYVHGWDYPLHLG 312 (640)
Q Consensus 290 V~AyRlL~~~m~~~g~dyPLHLG 312 (640)
.+....++++|++.|.+| ||+.
T Consensus 238 ~~~~~~la~~L~~~Gvd~-i~vs 259 (349)
T 3hgj_A 238 LEDTLAFARRLKELGVDL-LDCS 259 (349)
T ss_dssp HHHHHHHHHHHHHTTCCE-EEEE
T ss_pred HHHHHHHHHHHHHcCCCE-EEEe
Confidence 556778899999999998 6654
No 285
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=71.28 E-value=15 Score=39.65 Aligned_cols=62 Identities=18% Similarity=0.373 Sum_probs=49.0
Q ss_pred HHHHHHHHHHcCCCEEEE-ecCC-HH-HHHHHHHHHHHhhcCCC-Ccceee-ccCCCHHHHHHHhhh-cCceee
Q 006566 120 TVEEVMRIADQGADLVRI-TVQG-KR-EADACFEIKNSLVQKNY-NIPLVA-DIHFAPSVALRVAEC-FDKIRV 187 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRv-tvp~-~~-~A~~l~~I~~~L~~~g~-~iPLVA-DIHF~~~~Al~Aa~~-v~KVRI 187 (640)
..+++.++.++|++.|=| +..+ .+ ..+.++.|++. + ++|+++ ++ .++..|..+.++ +|.|-+
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~-----~~~~pvi~~~v-~t~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK-----YPHLQVIGGNV-VTAAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH-----CTTCEEEEEEE-CSHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh-----CCCCceEeccc-chHHHHHHHHHcCCCEEEE
Confidence 578889999999999988 3333 22 34678888875 4 699997 67 678999999999 999988
No 286
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=71.04 E-value=8.8 Score=39.21 Aligned_cols=191 Identities=17% Similarity=0.199 Sum_probs=99.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHH-----HHHHHHHHHHHhhcCCCCcceeeccC-----CCHHHHHHHhhh-cCc
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKR-----EADACFEIKNSLVQKNYNIPLVADIH-----FAPSVALRVAEC-FDK 184 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~-----~A~~l~~I~~~L~~~g~~iPLVADIH-----F~~~~Al~Aa~~-v~K 184 (640)
-.+..+++..+|.+||+-+|-+-+-+.+ +.+.+.++.+.+|++--++.+=-=-. ..-+..+ .+. -|-
T Consensus 28 TpeEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~Ttg~~~~~~e~R~~~--~~~~Pe~ 105 (275)
T 3no5_A 28 TVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAGNERGAM--LSLRPDM 105 (275)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCCCTTCCGGGGTT--GGGCCSE
T ss_pred CHHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHHhhH--hhcCCCE
Confidence 3688999999999999999999887653 45556666665555421232210000 1111000 111 233
Q ss_pred eeeCCC--CCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHH
Q 006566 185 IRVNPG--NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262 (640)
Q Consensus 185 VRINPG--N~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSA 262 (640)
.=+|.| ||++.- |.+- .+.+..+.+.++|+|+..=|.+ | + .++++.+
T Consensus 106 aSl~~gs~Nf~~~v--~~N~--------------~~~~~~~~~~~~e~Gi~pE~e~------------f--d-~g~l~~~ 154 (275)
T 3no5_A 106 ASLATGSVNFPTRV--YDNP--------------PELVDWLAAEMKTYGIKPEVEA------------F--D-LSMIFQA 154 (275)
T ss_dssp EEEECSCEECSSSE--ECCC--------------HHHHHHHHHHHHHTTCEEEEEE------------S--S-THHHHHH
T ss_pred EEecCccccccccc--ccCC--------------HHHHHHHHHHHHHcCCeeEEEE------------E--c-HHHHHHH
Confidence 446777 565421 2211 1235667788888888887777 2 1 2555555
Q ss_pred HHHHH--HHHHCCCCcEEEEEEe---CChhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHHHHHHHhhhc
Q 006566 263 FEFAR--ICRKLDFHNFLFSMKA---SNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDG 337 (640)
Q Consensus 263 le~~~--i~e~~~F~diviSmKs---Sn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAiGIG~LL~DG 337 (640)
..+++ ++..--|-++|+-++. +++.. ... +.+.+++.+-+ .+..++=.|..+--....|+.+|.-.-=|
T Consensus 155 ~~l~~~Gl~~~p~~~~~vlGv~~g~~~~~~~-l~~---~~~~l~~~~~~--~~w~v~g~Gr~~~p~~~~A~~~GGhvRVG 228 (275)
T 3no5_A 155 AAMQAAGAIVGPLHIQFVMGIKNAMPVDREV-LEF---YVQTLKRLSPD--ATWTGAGIGRHQLTMARWSLELGGHCRTG 228 (275)
T ss_dssp HHHHHHTSSCSSCEEEEEECCTTSCCCCHHH-HHH---HHHHHHHHCTT--CEEEEEECGGGHHHHHHHHHHHTCEEEES
T ss_pred HHHHHCCCCCCCeeEEEEeCCCCCCCCCHHH-HHH---HHHHHHhCCCC--CeEEEEecCHhhHHHHHHHHHhCCCeEEc
Confidence 44443 1222223455554432 23322 222 22332221222 35566555555555566677777666677
Q ss_pred CCcEEEee
Q 006566 338 LGDTIRVS 345 (640)
Q Consensus 338 IGDTIRVS 345 (640)
+.|+++.+
T Consensus 229 lEDnl~~~ 236 (275)
T 3no5_A 229 LEDNVRLD 236 (275)
T ss_dssp TTTCCBSS
T ss_pred CCcceeCC
Confidence 77777654
No 287
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=70.91 E-value=73 Score=36.66 Aligned_cols=161 Identities=15% Similarity=0.117 Sum_probs=101.6
Q ss_pred CCHHHHHHHHHHHHHcCCCE--EEEe----------cCCHHHHHHHHHHHHHhhcCCCCccee---------eccCCCHH
Q 006566 115 KDVAGTVEEVMRIADQGADL--VRIT----------VQGKREADACFEIKNSLVQKNYNIPLV---------ADIHFAPS 173 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGcei--VRvt----------vp~~~~A~~l~~I~~~L~~~g~~iPLV---------ADIHF~~~ 173 (640)
..++.-++=+..|.++|+++ +=+. .++..+-+.++.|++.+.+ +++. .=-|+..+
T Consensus 122 ~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~l~~~~~~----~~l~~l~R~~n~vgy~~~p~~ 197 (718)
T 3bg3_A 122 VRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELIPN----IPFQMLLRGANAVGYTNYPDN 197 (718)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCSS----SCEEEEECGGGTTSSSCCCHH
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHHHHHHccc----chHHHHhcccccccccccCCc
Confidence 45666677788889998777 7776 6666777889999887432 3332 22244443
Q ss_pred H----HHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHH
Q 006566 174 V----ALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248 (640)
Q Consensus 174 ~----Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril 248 (640)
+ ...|+++ ++-|||.= . - + .+ +++.+.++.||+.|..++..+.+.. ++.
T Consensus 198 ~~~~~i~~a~~~Gvd~irIf~----s-~--------n---------~l-~~l~~~i~~ak~~G~~v~~~i~~~~---d~~ 251 (718)
T 3bg3_A 198 VVFKFCEVAKENGMDVFRVFD----S-L--------N---------YL-PNMLLGMEAAGSAGGVVEAAISYTG---DVA 251 (718)
T ss_dssp HHHHHHHHHHHHTCCEEEEEC----S-S--------C---------CH-HHHHHHHHHHHTTTSEEEEEEECCS---CTT
T ss_pred chHHHHHHHHhcCcCEEEEEe----c-H--------H---------HH-HHHHHHHHHHHHcCCeEEEEEEeec---ccc
Confidence 2 2456677 99999851 1 0 0 12 2588889999999998887776652 111
Q ss_pred HHhCC--ChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCC-CcceEEE
Q 006566 249 SYYGD--SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGW-DYPLHLG 312 (640)
Q Consensus 249 ~ryGd--tp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~-dyPLHLG 312 (640)
+-|.. +| +-.++.++.+++.|-+ .|++|-++=..+=+.++.+++.+.++ + +-|+|+-
T Consensus 252 dp~r~~~~~----e~~~~~a~~l~~~Ga~--~I~l~DT~G~~~P~~v~~lV~~lk~~-~p~~~I~~H 311 (718)
T 3bg3_A 252 DPSRTKYSL----QYYMGLAEELVRAGTH--ILCIKDMAGLLKPTACTMLVSSLRDR-FPDLPLHIH 311 (718)
T ss_dssp CTTCCTTCH----HHHHHHHHHHHHHTCS--EEEEECTTSCCCHHHHHHHHHHHHHH-STTCCEEEE
T ss_pred CCCCCCCCH----HHHHHHHHHHHHcCCC--EEEEcCcCCCcCHHHHHHHHHHHHHh-CCCCeEEEE
Confidence 11211 44 4455666777777876 78899887665556666666665443 3 5677653
No 288
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=70.88 E-value=10 Score=38.80 Aligned_cols=68 Identities=12% Similarity=0.232 Sum_probs=51.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecC--CH-HHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQ--GK-READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp--~~-~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.|.+..++++.++.++|.+.|.+-+- +. .+.+.++.|++.+ |.++||..|.| |++.-|...++.+++.
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 215 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAV---GDDFGIMVDYNQSLDVPAAIKRSQALQQE 215 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHH---CSSSEEEEECTTCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHh---CCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 57788899999999999999999764 43 3567788888753 66899999988 5666565555555543
No 289
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=70.52 E-value=6.7 Score=42.91 Aligned_cols=105 Identities=7% Similarity=0.006 Sum_probs=79.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecC-CHHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhh--cCceeeCCC
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAEC--FDKIRVNPG 190 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp-~~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~--v~KVRINPG 190 (640)
+.+..++-.++|.+. ..|+=|-=| ..++-+.++.+.+++ +.++|||+|=- .||+.+..+++. ++.|.|-|.
T Consensus 282 t~~Elid~y~~lle~-ypIv~IEDPl~~dD~eg~a~Lt~~l---g~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIKvn 357 (452)
T 3otr_A 282 TGEKLKEVYEGWLKK-YPIISVEDPFDQDDFASFSAFTKDV---GEKTQVIGDDILVTNILRIEKALKDKACNCLLLKVN 357 (452)
T ss_dssp CHHHHHHHHHHHHHH-SCEEEEECCSCTTCHHHHHHHHHHH---TTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHH
T ss_pred cHHHHHHHHHHHHhh-hCceEEecCCChhhHHHHHHHHHhh---CCCeEEEeCccccCCHHHHHHHHhcCCCCEEEeecc
Confidence 457777777775442 347777544 467788999999874 34699999954 489999988875 999999999
Q ss_pred CCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHh
Q 006566 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDR 246 (640)
Q Consensus 191 N~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~r 246 (640)
.+|.-.. ..++++.|+++|..+=||--+|--+|.
T Consensus 358 QIGgITE----------------------alka~~lA~~~G~~vmvshrSGETeD~ 391 (452)
T 3otr_A 358 QIGSVTE----------------------AIEACLLAQKSGWGVQVSHRSGETEDS 391 (452)
T ss_dssp HHCCHHH----------------------HHHHHHHHHHTTCEEEEECCSSCCSCC
T ss_pred ccccHHH----------------------HHHHHHHHHHcCCeEEEeCCCCCCchh
Confidence 9998432 567889999999998788777755443
No 290
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=70.42 E-value=9.6 Score=35.98 Aligned_cols=62 Identities=21% Similarity=0.229 Sum_probs=45.9
Q ss_pred HHHHHHHHHcCCCEEEEecC-----------CHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cCceee
Q 006566 121 VEEVMRIADQGADLVRITVQ-----------GKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDKIRV 187 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp-----------~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~KVRI 187 (640)
.+++.++.++|+|+|-+..+ .....+.++++++. +++|++|+-=. ++.-+..+++. ++-|=+
T Consensus 129 ~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~-----~~ipvia~GGI~~~~~~~~~~~~Gad~v~v 203 (223)
T 1y0e_A 129 VEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQS-----VDAKVIAEGNVITPDMYKRVMDLGVHCSVV 203 (223)
T ss_dssp HHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHH-----CCSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhh-----CCCCEEEecCCCCHHHHHHHHHcCCCEEEE
Confidence 56778899999999966432 12334556666664 57999999988 89998888877 776655
No 291
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=70.40 E-value=5.7 Score=39.65 Aligned_cols=63 Identities=17% Similarity=0.296 Sum_probs=50.8
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCC
Q 006566 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNF 192 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~ 192 (640)
+.+|.+..++|||++|= .|+. +.+-++.+++ +.+|+++++. +|.=++.|.+. +|-|-+-|...
T Consensus 95 t~~~a~~Ai~AGA~fIv--sP~~-~~~vi~~~~~------~gi~~ipGv~-TptEi~~A~~~Gad~vK~FPa~~ 158 (232)
T 4e38_A 95 NGEQALAAKEAGATFVV--SPGF-NPNTVRACQE------IGIDIVPGVN-NPSTVEAALEMGLTTLKFFPAEA 158 (232)
T ss_dssp SHHHHHHHHHHTCSEEE--CSSC-CHHHHHHHHH------HTCEEECEEC-SHHHHHHHHHTTCCEEEECSTTT
T ss_pred CHHHHHHHHHcCCCEEE--eCCC-CHHHHHHHHH------cCCCEEcCCC-CHHHHHHHHHcCCCEEEECcCcc
Confidence 57899999999999993 4553 3444555555 6899999997 99999999999 99999999754
No 292
>2nva_A Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=69.88 E-value=13 Score=38.14 Aligned_cols=153 Identities=12% Similarity=0.158 Sum_probs=77.7
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCc-ceeeccCC-CHHHHHHHhhhcCceeeCCCCCCchhh
Q 006566 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNI-PLVADIHF-APSVALRVAECFDKIRVNPGNFADRRA 197 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~i-PLVADIHF-~~~~Al~Aa~~v~KVRINPGN~~d~~k 197 (640)
+.+=++.|.++|| .+.|-+..||..+.+ .|++- +++---.+ .+.-...|+++ .|++ + ++-+ .
T Consensus 52 ~~~v~~~l~~~G~---g~~vas~~E~~~~~~-------~G~~~~~I~~~~~~k~~~~l~~a~~~--~v~~-~-~vds-~- 115 (372)
T 2nva_A 52 DEVLLKTMCDKNV---NFDCASSSEIKKVIQ-------IGVSPSRIIFAHTMKTIDDLIFAKDQ--GVDI-A-TFDS-S- 115 (372)
T ss_dssp CHHHHHHHHHTTC---EEEECSHHHHHHHHH-------HTCCGGGEEECCSCCCHHHHHHHHHH--TCCE-E-EECS-H-
T ss_pred CHHHHHHHHHcCC---cEEEcCHHHHHHHHH-------cCCCHHHEEECCCCCCHHHHHHHHHC--CCCE-E-EeCC-H-
Confidence 3444566778896 789999999988764 26654 34433332 34444455554 1221 1 3322 1
Q ss_pred hccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcE
Q 006566 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNF 277 (640)
Q Consensus 198 ~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~di 277 (640)
+|+++|. +.+++.++.+||-+..+.-.-+..+|+|-+++. +.+.++.+.+.+..=.
T Consensus 116 -------------~~l~~l~-------~~~~~~~v~lrv~~~~~~~~~~~~~R~G~~~~~----~~~~~~~~~~~~l~~~ 171 (372)
T 2nva_A 116 -------------FELDKIH-------TYHPNCKMILRIRCDDPNATVQLGNKFGANEDE----IRHLLEYAKQLDIEVI 171 (372)
T ss_dssp -------------HHHHHHH-------HHCTTCEEEEEBCCCCTTCSBCCTTTSSBCGGG----HHHHHHHHHHTTCCEE
T ss_pred -------------HHHHHHH-------HhCCCCeEEEEEecCCCCCcccCCCCCCCCHHH----HHHHHHHHHHcCCeEE
Confidence 2344443 334455667776654311001123889976654 3345555555554321
Q ss_pred EEEE--EeC--ChhhH---HHHHHHHHHHHHHcCCCcc-eEEE
Q 006566 278 LFSM--KAS--NPVVM---VQAYRLLVAEMYVHGWDYP-LHLG 312 (640)
Q Consensus 278 viSm--KsS--n~~~m---V~AyRlL~~~m~~~g~dyP-LHLG 312 (640)
=|.. =+. ++... ++..+.+++++.+.|++.+ +|+|
T Consensus 172 Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~G 214 (372)
T 2nva_A 172 GISFHVGSGSRNPEAYYRAIKSSKEAFNEAISVGHKPYILDIG 214 (372)
T ss_dssp EEECCCCBSBCCHHHHHHHHHHHHHHHHHHHHHTCCCCEEECC
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeC
Confidence 1211 111 22222 3344446667777788766 3663
No 293
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=69.83 E-value=21 Score=36.85 Aligned_cols=93 Identities=15% Similarity=0.154 Sum_probs=66.1
Q ss_pred cCCCCceEEEeccCC----CCCCHHHHHHHHHHHHHcCCCEEEEecCC-----------HHHHHHHHHHHHHhhcCCCCc
Q 006566 98 IGSEHPIRVQTMTTN----DTKDVAGTVEEVMRIADQGADLVRITVQG-----------KREADACFEIKNSLVQKNYNI 162 (640)
Q Consensus 98 IGG~~PI~VQSMt~t----~T~Dv~atv~Qi~rl~~aGceiVRvtvp~-----------~~~A~~l~~I~~~L~~~g~~i 162 (640)
+|.+.||-|= +... .-.+.+.+++-+++|.++|+++|=++..+ .-..+.++.||+. +++
T Consensus 216 vG~d~pV~vR-ls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-----~~i 289 (349)
T 3hgj_A 216 VPRELPLFVR-VSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKR-----VGL 289 (349)
T ss_dssp SCTTSCEEEE-EESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHH-----HCC
T ss_pred hcCCceEEEE-eccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHH-----cCc
Confidence 4666777662 1111 23567889999999999999999988421 1234567778875 679
Q ss_pred ceeeccCC-CHHHHHHHhhh--cCceeeCCCCCCchh
Q 006566 163 PLVADIHF-APSVALRVAEC--FDKIRVNPGNFADRR 196 (640)
Q Consensus 163 PLVADIHF-~~~~Al~Aa~~--v~KVRINPGN~~d~~ 196 (640)
|+++.--+ ++.-|.++++. +|-|=+-=+-+.+++
T Consensus 290 PVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPd 326 (349)
T 3hgj_A 290 RTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPY 326 (349)
T ss_dssp EEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTT
T ss_pred eEEEECCCCCHHHHHHHHHCCCceEEEecHHHHhCch
Confidence 99999875 79999998876 888877666666544
No 294
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=69.77 E-value=9.1 Score=40.35 Aligned_cols=154 Identities=21% Similarity=0.273 Sum_probs=88.1
Q ss_pred HHHHHHHHHcCCCEEEEe-cCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCC----CCCCch
Q 006566 121 VEEVMRIADQGADLVRIT-VQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP----GNFADR 195 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvt-vp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINP----GN~~d~ 195 (640)
+....-++++|+|+|=.+ +.+. ++.+..|. ++.+++|+++|.|=-..++..+.+-++-||.-. ||+..-
T Consensus 86 ~~e~qilea~GaD~Id~s~~l~p--~d~~~~i~----k~~~~~~~~~~a~~lgea~r~~~~Ga~~i~t~ge~g~~~~ve~ 159 (330)
T 2yzr_A 86 TTEALVLEAIGVDMIDESEVLTQ--ADPFFHIY----KKKFNVPFVCGARNLGEAVRRIWEGAAMIRTKGEAGTGNIVEA 159 (330)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCC--SCSSCCCC----GGGCSSCEEEECSSHHHHHHHHHHTCSEEEECCCTTSCCTHHH
T ss_pred hHHHHHHHHcCCCEEehhccCCH--HHHHHHhh----hhhcccchhhccccHHHHHHHHhcCcceeeccCCCCcccchhH
Confidence 456666777999999432 1222 22223332 236899999999977777666633399999988 787753
Q ss_pred hh---h-----ccccccchHHHHHHHhhhHhhHH------------------------------------HHHHHHHH-c
Q 006566 196 RA---Q-----FEQLEYTDDEYQKELQHIEEVFS------------------------------------PLVEKCKK-Y 230 (640)
Q Consensus 196 ~k---~-----F~~~eYtdeeY~~Ele~I~~~f~------------------------------------~lV~~~Ke-~ 230 (640)
-+ + -....|+++|....-++....+. +++...++ .
T Consensus 160 v~H~r~~~~~~~~~s~~~~~El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~ 239 (330)
T 2yzr_A 160 VRHMRLMNEAIAQLQRMTDEEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLG 239 (330)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhC
Confidence 11 0 01124566664332233333342 33333333 2
Q ss_pred CCeEE-EeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEE---EEeCChhhHHHHHHHHHHH
Q 006566 231 GRAVR-IGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFS---MKASNPVVMVQAYRLLVAE 299 (640)
Q Consensus 231 g~aIR-IGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviS---mKsSn~~~mV~AyRlL~~~ 299 (640)
.+|+= |+- .| + .|| +.+.-+.+.|.+-+.|. ||+.||..+.++++...+.
T Consensus 240 ~IPVV~VAe-GG-I---------~Tp--------eda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~~ 293 (330)
T 2yzr_A 240 RLPVVNFAA-GG-V---------ATP--------ADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYN 293 (330)
T ss_dssp SCSSEEEEC-SC-C---------CSH--------HHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHT
T ss_pred CCCeEEEEE-CC-C---------CCH--------HHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHHh
Confidence 33331 111 11 1 134 34455556799888775 8999999888877776655
No 295
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=69.59 E-value=20 Score=38.03 Aligned_cols=96 Identities=9% Similarity=0.049 Sum_probs=72.0
Q ss_pred CHHHHHHHHH-HHHHcCCCEEEEecC-CHHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhh--cCceeeCC
Q 006566 116 DVAGTVEEVM-RIADQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAEC--FDKIRVNP 189 (640)
Q Consensus 116 Dv~atv~Qi~-rl~~aGceiVRvtvp-~~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~--v~KVRINP 189 (640)
+.+..++-+. .|.+.+ +.=|-=| ..++-+.+++++++ +++||++|=+ .++.-...+++. ++-|.|.|
T Consensus 268 ~~~~ai~~~~~~l~~~~--i~~iEeP~~~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~ 340 (427)
T 2pa6_A 268 TREELLDYYKALVDEYP--IVSIEDPFHEEDFEGFAMITKE-----LDIQIVGDDLFVTNVERLRKGIEMKAANALLLKV 340 (427)
T ss_dssp CHHHHHHHHHHHHHHSC--EEEEECCSCTTCHHHHHHHHHH-----SSSEEEESTTTTTCHHHHHHHHHHTCCSEEEECH
T ss_pred CHHHHHHHHHHHHhhCC--CcEEEcCCChhhHHHHHHHHhh-----CCCeEEeCccccCCHHHHHHHHHhCCCCEEEEcc
Confidence 5666777665 566665 6666655 34567889999885 8899999975 447777766654 99999999
Q ss_pred CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCC
Q 006566 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (640)
Q Consensus 190 GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNh 240 (640)
...|.-.. ...++..|+++|+++=+|-+.
T Consensus 341 ~~~GGite----------------------a~~ia~lA~~~g~~~~~~h~~ 369 (427)
T 2pa6_A 341 NQIGTLSE----------------------AVDAAQLAFRNGYGVVVSHRS 369 (427)
T ss_dssp HHHCSHHH----------------------HHHHHHHHHTTTCEEEEECCS
T ss_pred cccCCHHH----------------------HHHHHHHHHHcCCeEEEeCCC
Confidence 99987442 678999999999999776544
No 296
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=69.38 E-value=12 Score=40.25 Aligned_cols=84 Identities=18% Similarity=0.329 Sum_probs=59.4
Q ss_pred ecCCCC--ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC--C-------------------------------
Q 006566 97 AIGSEH--PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ--G------------------------------- 141 (640)
Q Consensus 97 ~IGG~~--PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp--~------------------------------- 141 (640)
.+||.. .|++ -+++...+.+..++++.++.+.|...+.+-+- +
T Consensus 136 LLGG~~r~~v~~--y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (440)
T 3t6c_A 136 LLGGKCRDGIAL--YVHTDGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAP 213 (440)
T ss_dssp HTTCCSCSSEEE--EEEECCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCS
T ss_pred HcCCCCCCeeEE--EEECCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccc
Confidence 357753 4444 33345578899999999999999999998642 1
Q ss_pred ----------HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 142 ----------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 142 ----------~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.++.+.++.||+. -|-++||..|.| |++.-|+..++.+++.
T Consensus 214 ~~~~~~~~~~~~d~~~v~avR~a---~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~ 266 (440)
T 3t6c_A 214 GIYFDPEAYAKSIPRLFDHLRNK---LGFSVELLHDAHERITPINAIHMAKALEPY 266 (440)
T ss_dssp SEECCHHHHHHHHHHHHHHHHHH---HCSSSEEEEECTTCSCHHHHHHHHHHTGGG
T ss_pred cccccchhhHHHHHHHHHHHHHh---cCCCCeEEEECCCCCCHHHHHHHHHHhhhc
Confidence 2456667777774 367899999998 6666676666666654
No 297
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=69.30 E-value=12 Score=38.58 Aligned_cols=192 Identities=15% Similarity=0.137 Sum_probs=99.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHH-----HHHHHHHHHHHhhcCCCCcceeeccCC---CH--HHHHHHhhh-cCc
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKR-----EADACFEIKNSLVQKNYNIPLVADIHF---AP--SVALRVAEC-FDK 184 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~-----~A~~l~~I~~~L~~~g~~iPLVADIHF---~~--~~Al~Aa~~-v~K 184 (640)
-.+..+++..++.+||+-+|-+-+-+.+ +++.+.++.+.+|++..++.+=---.. ++ +++.. +. =|-
T Consensus 32 TpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~~~eeR~~~~--~~~Pe~ 109 (284)
T 3chv_A 32 TVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQARGGML--PLKPDM 109 (284)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTG--GGCCSE
T ss_pred CHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHHHHhh--hcCCCE
Confidence 4688999999999999999999988765 566666666666665434433211111 11 11111 11 122
Q ss_pred eeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHH
Q 006566 185 IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264 (640)
Q Consensus 185 VRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle 264 (640)
.=+|.|-+.-.+..|.+- .+.+..+.+.|+|+|+..=|.+ | + .|++..+.
T Consensus 110 aSl~~Gs~Nf~~~v~~n~--------------~~~~~~~~~~~~e~Gv~pE~e~------------f--d-~g~l~~~~- 159 (284)
T 3chv_A 110 ASLSVGSNNFPSRVYENP--------------PDLVDWLAAQMRSYRVTPEIEA------------F--D-LSHILRAI- 159 (284)
T ss_dssp EEECCSCEECSSSEECCC--------------HHHHHHHHHHHHHHTCEEEEEE------------S--S-HHHHHHHH-
T ss_pred EEecCcccccCCccccCC--------------HHHHHHHHHHHHHcCCEEEEEE------------E--C-HHHHHHHH-
Confidence 235555432111112111 1235667777888888877777 2 1 24544443
Q ss_pred HHHHHHHCCC------CcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHHHHHHHhhhcC
Q 006566 265 FARICRKLDF------HNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGL 338 (640)
Q Consensus 265 ~~~i~e~~~F------~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAiGIG~LL~DGI 338 (640)
-+.+.|. -++|+-++..- .-..+....+.+.+-. |+ .+.++.++=.|..+--....|+..|.-.-=|+
T Consensus 160 ---~l~~~Gll~~p~~~~~vlGv~~g~-~~~~~~L~~~~~~~p~-~~-~~~~ws~~g~Gr~q~p~~~~A~~~GGhvRVGl 233 (284)
T 3chv_A 160 ---DMHGRGLLYGKLYVQFVMGVKNAM-PADREVFDFYVRMMRT-RA-PQAEWCAAGIGANQLTVNEWAIAAGGHTRTGL 233 (284)
T ss_dssp ---HHHHTTCSCSSCEEEEEECCTTSC-CCCHHHHHHHHHHHHH-HC-TTSEEEEEECTTHHHHHHHHHHHTTCEEEEST
T ss_pred ---HHHHcCCCCCCceEEEEEecCCCC-CCCHHHHHHHHHhccC-CC-CCceEEEEecCcchhHHHHHHHHcCCCeEEec
Confidence 3333443 45565543211 1122333333333321 11 01235555555544455566666666666677
Q ss_pred CcEEEee
Q 006566 339 GDTIRVS 345 (640)
Q Consensus 339 GDTIRVS 345 (640)
.|+++.+
T Consensus 234 EDnl~~~ 240 (284)
T 3chv_A 234 EDNIRLD 240 (284)
T ss_dssp TTCCBSS
T ss_pred ccccCCC
Confidence 7777765
No 298
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=69.30 E-value=78 Score=38.21 Aligned_cols=162 Identities=12% Similarity=0.071 Sum_probs=100.4
Q ss_pred CCHHHHHHHHHHHHHcCCCE--EEE----ecC------CHHHHHHHHHHHHHhhcCCCCccee---------eccCCCHH
Q 006566 115 KDVAGTVEEVMRIADQGADL--VRI----TVQ------GKREADACFEIKNSLVQKNYNIPLV---------ADIHFAPS 173 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGcei--VRv----tvp------~~~~A~~l~~I~~~L~~~g~~iPLV---------ADIHF~~~ 173 (640)
..++.-++=+..|.++|.++ +=+ +.| +..+-+.|..+++.+.. +++. .=.|.-.+
T Consensus 570 ~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~e~l~~~~~~~~~----~~~~~l~R~~n~vg~~~~~~~ 645 (1165)
T 2qf7_A 570 MRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPWERLALIREGAPN----LLLQMLLRGANGVGYTNYPDN 645 (1165)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHHHHHHHHHHHCTT----SEEEEEEETTTBTCSSCCCHH
T ss_pred CCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHHHHHHHHHHHchh----hHHHHHhccccccccccCCch
Confidence 44555556678889998777 565 333 55567788888887432 3332 22344443
Q ss_pred H----HHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCC-CCcHhH
Q 006566 174 V----ALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG-SLSDRI 247 (640)
Q Consensus 174 ~----Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhG-SLs~ri 247 (640)
+ ...|+++ ++.|||- .. -. . -+++.+.++.+|++|..++..+... ++.+
T Consensus 646 ~~~~~i~~a~~~g~d~irif----~s-l~-----------------~-~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d-- 700 (1165)
T 2qf7_A 646 VVKYFVRQAAKGGIDLFRVF----DC-LN-----------------W-VENMRVSMDAIAEENKLCEAAICYTGDILN-- 700 (1165)
T ss_dssp HHHHHHHHHHHHTCCEEEEE----CT-TC-----------------C-GGGGHHHHHHHHHTTCEEEEEEECCSCTTC--
T ss_pred hHHHHHHHHHhcCcCEEEEE----ee-HH-----------------H-HHHHHHHHHHHHhccceEEEEEEEeccccC--
Confidence 3 3467777 9999982 21 10 1 1368889999999998887665432 2322
Q ss_pred HHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEEE
Q 006566 248 MSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312 (640)
Q Consensus 248 l~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLG 312 (640)
-| .+..=.+-+++.++-+.+.|-+ .|++|-++=..+=..++.|++.+.++ ++-|||+-
T Consensus 701 --~~--r~~~~~~~~~~~~~~~~~~Ga~--~i~l~DT~G~~~P~~~~~lv~~l~~~-~~~~i~~H 758 (1165)
T 2qf7_A 701 --SA--RPKYDLKYYTNLAVELEKAGAH--IIAVKDMAGLLKPAAAKVLFKALREA-TGLPIHFH 758 (1165)
T ss_dssp --TT--SGGGCHHHHHHHHHHHHHTTCS--EEEEEETTCCCCHHHHHHHHHHHHHH-CSSCEEEE
T ss_pred --CC--CCCCCHHHHHHHHHHHHHcCCC--EEEEeCccCCcCHHHHHHHHHHHHHh-cCCeEEEE
Confidence 11 1112245667778888889987 68899887665555666666665443 36777664
No 299
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=69.26 E-value=15 Score=38.27 Aligned_cols=68 Identities=16% Similarity=0.216 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~--~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.|.+..++++.++.++|.+.|.+-+-+ .+..+.++.|++.+ |.++||..|.| |++.-|...++.+++.
T Consensus 163 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v~avr~a~---g~d~~l~vDan~~~~~~~a~~~~~~l~~~ 234 (388)
T 2nql_A 163 RTLKARGELAKYWQDRGFNAFKFATPVADDGPAAEIANLRQVL---GPQAKIAADMHWNQTPERALELIAEMQPF 234 (388)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHH---CTTSEEEEECCSCSCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCCCCChHHHHHHHHHHHHh---CCCCEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 588999999999999999999987542 22267777777643 66899999988 5666565555555554
No 300
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=69.25 E-value=14 Score=38.94 Aligned_cols=85 Identities=14% Similarity=0.143 Sum_probs=60.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCC-CCcceeeccCC--C
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKN-YNIPLVADIHF--A 171 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g-~~iPLVADIHF--~ 171 (640)
+||..+=+|.+-.+....|.+..++++.++.+.|...+.+-+-. .++.+.++.|++. -| -+++|..|.|- +
T Consensus 146 LGg~~r~~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a---~gg~~~~L~vDaN~~w~ 222 (391)
T 4e8g_A 146 LGGVAAERVPSYYATGIGQPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWER---IRGTGTRLAVDGNRSLP 222 (391)
T ss_dssp TTCCSCSEEECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHH---HTTTTCEEEEECTTCCC
T ss_pred cCCCCCCcEEEeEEcCCCCHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHH---hCCCCCeEEEeCCCCCC
Confidence 46654444444444445688999999999999999999998753 3667777777664 24 77999999884 5
Q ss_pred HHHHHHHhhhcCce
Q 006566 172 PSVALRVAECFDKI 185 (640)
Q Consensus 172 ~~~Al~Aa~~v~KV 185 (640)
+.-|+..++.++..
T Consensus 223 ~~~A~~~~~~L~~~ 236 (391)
T 4e8g_A 223 SRDALRLSRECPEI 236 (391)
T ss_dssp HHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHhhc
Confidence 56566666666643
No 301
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=69.10 E-value=9.6 Score=39.96 Aligned_cols=82 Identities=17% Similarity=0.114 Sum_probs=54.0
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC-----C--HHHHHHHHHHHHHhhcCCCCcceeeccCC
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ-----G--KREADACFEIKNSLVQKNYNIPLVADIHF 170 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp-----~--~~~A~~l~~I~~~L~~~g~~iPLVADIHF 170 (640)
+||..+=+|.+-.+....|.+..++++.++.+.|...+.+-+- . .++.+.++.|++ +-|-+++|..|.|-
T Consensus 127 LGg~~~~~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~v~avR~---a~G~~~~L~vDaN~ 203 (386)
T 3fv9_G 127 TGGRVAGPVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLA---DRQPGEWYLADANN 203 (386)
T ss_dssp TTCCCSSCBCEEEEECSCCHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHHHHHHTT---TCCTTCEEEEECTT
T ss_pred hCCCCCCceeeeEecCCCCHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHHHHHHHH---HcCCCCeEEEECCC
Confidence 3554333333333334567899999999999999999999874 1 344455555544 23678999999985
Q ss_pred C--HHHHHHHhhhc
Q 006566 171 A--PSVALRVAECF 182 (640)
Q Consensus 171 ~--~~~Al~Aa~~v 182 (640)
. +.-|+..++.+
T Consensus 204 ~~~~~~A~~~~~~l 217 (386)
T 3fv9_G 204 GLTVEHALRMLSLL 217 (386)
T ss_dssp CCCHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHh
Confidence 5 55555555555
No 302
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=68.93 E-value=5.4 Score=39.62 Aligned_cols=63 Identities=14% Similarity=0.296 Sum_probs=50.9
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCc------ceeeccCCCHHHHHHHhhh-cCceeeCCCCC
Q 006566 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNI------PLVADIHFAPSVALRVAEC-FDKIRVNPGNF 192 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~i------PLVADIHF~~~~Al~Aa~~-v~KVRINPGN~ 192 (640)
|.+|.++.++|||+++ -.|+. ..+-++..++ +.+ |++.++ ++|.=++.|.++ ++-|-+-|+..
T Consensus 74 t~~~a~~ai~AGA~fi--vsP~~-~~evi~~~~~------~~v~~~~~~~~~PG~-~TptE~~~A~~~Gad~vK~FPa~~ 143 (217)
T 3lab_A 74 TADDFQKAIDAGAQFI--VSPGL-TPELIEKAKQ------VKLDGQWQGVFLPGV-ATASEVMIAAQAGITQLKCFPASA 143 (217)
T ss_dssp SHHHHHHHHHHTCSEE--EESSC-CHHHHHHHHH------HHHHCSCCCEEEEEE-CSHHHHHHHHHTTCCEEEETTTTT
T ss_pred CHHHHHHHHHcCCCEE--EeCCC-cHHHHHHHHH------cCCCccCCCeEeCCC-CCHHHHHHHHHcCCCEEEECcccc
Confidence 6889999999999998 34664 2334444444 568 999999 999999999999 99999999874
No 303
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=68.76 E-value=12 Score=37.48 Aligned_cols=142 Identities=11% Similarity=0.211 Sum_probs=87.4
Q ss_pred HHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhc---------------CCC------------CcceeeccCCCHHH
Q 006566 122 EEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ---------------KNY------------NIPLVADIHFAPSV 174 (640)
Q Consensus 122 ~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~---------------~g~------------~iPLVADIHF~~~~ 174 (640)
.+++++.++|++ .|-+|-.+.++.++.+.+.++. .++ ++++++=| =+|..
T Consensus 81 ~~i~~~l~~g~~--~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~I-Et~~a 157 (267)
T 2vws_A 81 PLIKQVLDIGAQ--TLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQV-ESKTA 157 (267)
T ss_dssp HHHHHHHHTTCC--EEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEEC-CSHHH
T ss_pred HHHHHHHHhCCC--EEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEE-CCHHH
Confidence 678899999999 5666777777777777776531 111 26677666 45555
Q ss_pred HHHHhhh-----cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHH
Q 006566 175 ALRVAEC-----FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMS 249 (640)
Q Consensus 175 Al~Aa~~-----v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ 249 (640)
...+-++ +|-+=|-|+.+.-.-. ..|+ .+...+......++..|+++|++. |+.
T Consensus 158 v~~~~eIa~~~gvd~l~iG~~DL~~~lg----~~~~-----~~~p~v~~a~~~iv~aa~aaG~~~--~v~---------- 216 (267)
T 2vws_A 158 LDNLDEILDVEGIDGVFIGPADLSASLG----YPDN-----AGHPEVQRIIETSIRRIRAAGKAA--GFL---------- 216 (267)
T ss_dssp HHTHHHHHTSTTCCEEEECHHHHHHHTT----CSSS-----CCTHHHHHHHHHHHHHHHHTTCEE--EEE----------
T ss_pred HHHHHHHhCCCCCCEEEEChHHHHHHhC----CCCC-----CCCHHHHHHHHHHHHHHHHhCCeE--EEe----------
Confidence 4433222 4555566654432110 0111 011224455677899999999997 662
Q ss_pred HhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHH
Q 006566 250 YYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300 (640)
Q Consensus 250 ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m 300 (640)
..+| +.++.+.++||+-+.++ +|...+.++.+.+.+.+
T Consensus 217 --~~d~--------~~a~~~~~~G~~~~s~~---~d~~~l~~~~~~~~~~~ 254 (267)
T 2vws_A 217 --AVAP--------DMAQQCLAWGANFVAVG---VDTMLYSDALDQRLAMF 254 (267)
T ss_dssp --CSSH--------HHHHHHHHTTCCEEEEE---EHHHHHHHHHHHHHHTT
T ss_pred --cCCH--------HHHHHHHHCCCCEEEEc---hHHHHHHHHHHHHHHHH
Confidence 1234 46778889999876655 46666777777777763
No 304
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=68.67 E-value=1.1e+02 Score=31.25 Aligned_cols=155 Identities=18% Similarity=0.235 Sum_probs=100.1
Q ss_pred HHHHcCCCEEEEe------cCC---------HHHHHHHHHHHHHhhcCCCC-cceeeccCC----CHHHHHH----Hhhh
Q 006566 126 RIADQGADLVRIT------VQG---------KREADACFEIKNSLVQKNYN-IPLVADIHF----APSVALR----VAEC 181 (640)
Q Consensus 126 rl~~aGceiVRvt------vp~---------~~~A~~l~~I~~~L~~~g~~-iPLVADIHF----~~~~Al~----Aa~~ 181 (640)
-+.++|+|++=+. +.+ .+-....+.|++ +.+ .|+|||.=| +|.-|.. -++.
T Consensus 32 l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r-----~~~~~~vvaD~pfgsy~~~~~a~~~a~rl~ka 106 (264)
T 1m3u_A 32 LFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRR-----GAPNCLLLADLPFMAYATPEQAFENAATVMRA 106 (264)
T ss_dssp HHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHH-----HCTTSEEEEECCTTSSSSHHHHHHHHHHHHHT
T ss_pred HHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHh-----hCCCCcEEEECCCCCcCCHHHHHHHHHHHHHc
Confidence 3557899999663 111 122334555555 576 578999999 6665553 2233
Q ss_pred -cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE--EEeeCCCCCcHhHHHHh---CCCh
Q 006566 182 -FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV--RIGTNHGSLSDRIMSYY---GDSP 255 (640)
Q Consensus 182 -v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI--RIGvNhGSLs~ril~ry---Gdtp 255 (640)
++.|-|-=| . .+.+.|+.+.+.|+|+ .||.+-=|...+ .-| |.|
T Consensus 107 Ga~aVklEgg-----~----------------------e~~~~I~al~~agipV~gHiGLtPq~v~~~--ggf~v~grt- 156 (264)
T 1m3u_A 107 GANMVKIEGG-----E----------------------WLVETVQMLTERAVPVCGHLGLTPQSVNIF--GGYKVQGRG- 156 (264)
T ss_dssp TCSEEECCCS-----G----------------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHH--TSSCCCCCS-
T ss_pred CCCEEEECCc-----H----------------------HHHHHHHHHHHCCCCeEeeecCCceeeccc--CCeEEEeCC-
Confidence 566655544 1 2667788888999987 588754332111 112 234
Q ss_pred HHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHH
Q 006566 256 RGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAI 328 (640)
Q Consensus 256 ~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAi 328 (640)
++-.+.+++-++-+++.|=.-+++-+-.+ +..+.+.++ ++-|+- | -=||..-||+|--.-
T Consensus 157 ~~~a~~~i~rA~a~~eAGA~~ivlE~vp~------~~a~~it~~-----l~iP~i-g-IGag~~~dgQvLV~~ 216 (264)
T 1m3u_A 157 DEAGDQLLSDALALEAAGAQLLVLECVPV------ELAKRITEA-----LAIPVI-G-IGAGNVTDGQILVMH 216 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEESCCH------HHHHHHHHH-----CSSCEE-E-ESSCTTSSEEEECHH
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEecCCH------HHHHHHHHh-----CCCCEE-E-eCCCCCCCcceeeHH
Confidence 34469999999999999999998876322 345677887 788863 3 348999999986544
No 305
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=68.37 E-value=9.3 Score=40.05 Aligned_cols=111 Identities=8% Similarity=0.048 Sum_probs=69.0
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHH-HHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRI-ADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl-~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~A 175 (640)
+|.+-+++|=- |. .-+.+.+++-+++| .+.+ + =|-=|-. +.+.+..+++ .+++|+.+|=.+ ++.-+
T Consensus 191 ~G~~~~L~vDa--N~-~~~~~~A~~~~~~l~~~~~--i-~iEeP~~-~~~~~~~l~~-----~~~iPIa~dE~~~~~~~~ 258 (386)
T 3fv9_G 191 RQPGEWYLADA--NN-GLTVEHALRMLSLLPPGLD--I-VLEAPCA-SWAETKSLRA-----RCALPLLLDELIQTETDL 258 (386)
T ss_dssp CCTTCEEEEEC--TT-CCCHHHHHHHHHHSCSSCC--C-EEECCCS-SHHHHHHHHT-----TCCSCEEESTTCCSHHHH
T ss_pred cCCCCeEEEEC--CC-CCCHHHHHHHHHHhhccCC--c-EEecCCC-CHHHHHHHHh-----hCCCCEEeCCCcCCHHHH
Confidence 45555666531 11 12344444444555 3333 3 2232222 4455555655 478999999654 46666
Q ss_pred HHHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCC
Q 006566 176 LRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (640)
Q Consensus 176 l~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGS 242 (640)
..+++ .++-|.|.|+..|.-.. ...+...|+++|+++=+|-+.+|
T Consensus 259 ~~~~~~~a~d~v~~k~~~~GGit~----------------------~~~i~~~A~~~gi~~~~~~~~es 305 (386)
T 3fv9_G 259 IAAIRDDLCDGVGLKVSKQGGITP----------------------MLRQRAIAAAAGMVMSVQDTVGS 305 (386)
T ss_dssp HHHHHTTCCSEEEEEHHHHTSHHH----------------------HHHHHHHHHHTTCEEEEECSSCC
T ss_pred HHHHHhCCCCEEEECccccCCHHH----------------------HHHHHHHHHHcCCEEEeCCCCCC
Confidence 66664 49999999999987442 67799999999999988865543
No 306
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=68.34 E-value=14 Score=37.87 Aligned_cols=83 Identities=19% Similarity=0.152 Sum_probs=60.6
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHH-----------------------HHHHhhcCCCC-cceee
Q 006566 111 TNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFE-----------------------IKNSLVQKNYN-IPLVA 166 (640)
Q Consensus 111 ~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~-----------------------I~~~L~~~g~~-iPLVA 166 (640)
.+-.-|+.+|++..+.|.+.|-+.+=.+++|...|+.+.+ .-+.+++...+ +|+|+
T Consensus 104 ~~l~pD~~~tv~aa~~L~k~Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~ 183 (268)
T 2htm_A 104 TYLLPDPLETLKAAERLIEEDFLVLPYMGPDLVLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVV 183 (268)
T ss_dssp TTTCCCHHHHHHHHHHHHHTTCEECCEECSCHHHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEE
T ss_pred cccCcCHHHHHHHHHHHHHCCCEEeeccCCCHHHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEE
Confidence 4456788888888888888887777556778776665521 12334443467 99999
Q ss_pred ccCCC-HHHHHHHhhh-cCceeeCCCCCC
Q 006566 167 DIHFA-PSVALRVAEC-FDKIRVNPGNFA 193 (640)
Q Consensus 167 DIHF~-~~~Al~Aa~~-v~KVRINPGN~~ 193 (640)
|-... |.-|-.|++. ++.|=+|=+=..
T Consensus 184 ~GGI~tpsDAa~AmeLGAdgVlVgSAI~~ 212 (268)
T 2htm_A 184 DAGLGLPSHAAEVMELGLDAVLVNTAIAE 212 (268)
T ss_dssp ESCCCSHHHHHHHHHTTCCEEEESHHHHT
T ss_pred eCCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 98876 8999999999 999998876553
No 307
>1vfs_A Alanine racemase; TIM-barrel, greek-KEY motief, isomerase; HET: KCX DCS; 1.90A {Streptomyces lavendulae} SCOP: b.49.2.2 c.1.6.1 PDB: 1vfh_A* 1vft_A*
Probab=68.23 E-value=20 Score=37.13 Aligned_cols=145 Identities=14% Similarity=0.118 Sum_probs=75.1
Q ss_pred HHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccccc
Q 006566 126 RIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEYT 205 (640)
Q Consensus 126 rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eYt 205 (640)
.+.++||+ .+.|-+..||..+. +.|++-|++-=-|..++-...++++ .+. + ++-+ ..
T Consensus 52 ~l~~~G~~--~f~vas~~Ea~~~~-------~~G~~~~il~~~~~~~~~~~~~~~~--~i~--~-~vds-~~-------- 108 (386)
T 1vfs_A 52 AAQEAGAA--WLGTATPEEALELR-------AAGIQGRIMCWLWTPGGPWREAIET--DID--V-SVSG-MW-------- 108 (386)
T ss_dssp HHHHHTCC--EEEESSHHHHHHHH-------HTTCCSEEEECCCCTTCCHHHHHHT--TCE--E-EECS-HH--------
T ss_pred HHHHCCCC--EEEEeeHHHHHHHH-------hcCCCCCEEEECCCCHHHHHHHHHc--CCE--E-EECC-HH--------
Confidence 46788975 58888888887654 3477656552112222222233332 222 2 2322 11
Q ss_pred hHHHHHHHhhhHhhHHHHHHHHHHcCC--eEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEE-E-EE
Q 006566 206 DDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFL-F-SM 281 (640)
Q Consensus 206 deeY~~Ele~I~~~f~~lV~~~Ke~g~--aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~div-i-Sm 281 (640)
+ +..+-+.|++.|. .+.|=+|.| |+|+|-.|+. ++.+.+.++.+.++.-=+++ | +.
T Consensus 109 ------~-------l~~l~~~a~~~~~~~~V~l~vdtG------~~R~G~~~~e-~~~~~~~~~~i~~~~~l~l~Gl~tH 168 (386)
T 1vfs_A 109 ------A-------LDEVRAAARAAGRTARIQLKADTG------LGRNGCQPAD-WAELVGAAVAAQAEGTVQVTGVWSH 168 (386)
T ss_dssp ------H-------HHHHHHHHHHHTSCEEEEEEBCSS------CCSSSBCHHH-HHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred ------H-------HHHHHHHHHhcCCceEEEEEEcCC------CCCCCCCHhH-HHHHHHHHHHHHhCCCceEEEEEec
Confidence 1 3334445665554 567778888 4789977754 33455566666664321111 1 11
Q ss_pred -EeCC-h-----hhHHHHHHHHHHHHHHcCCCcc-eEEEe
Q 006566 282 -KASN-P-----VVMVQAYRLLVAEMYVHGWDYP-LHLGV 313 (640)
Q Consensus 282 -KsSn-~-----~~mV~AyRlL~~~m~~~g~dyP-LHLGV 313 (640)
=+.+ + ....+.++.+++++.+.|++.| +|+|-
T Consensus 169 ~~~~~~~~~~~~~~~~~~f~~~~~~l~~~g~~~~~~~~g~ 208 (386)
T 1vfs_A 169 FACADEPGHPSIRLQLDAFRDMLAYAEKEGVDPEVRHIAN 208 (386)
T ss_dssp CSSTTSTTCHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEC
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCeEEecC
Confidence 1111 1 1234455556677777787654 47664
No 308
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=68.22 E-value=20 Score=37.47 Aligned_cols=71 Identities=13% Similarity=0.140 Sum_probs=54.6
Q ss_pred CCCCCHHHHHHHHHHHHHc-CCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 112 NDTKDVAGTVEEVMRIADQ-GADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 112 t~T~Dv~atv~Qi~rl~~a-GceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
..-.+.+..++++.++.+. |...+.+-+-. .++.+.++.||+. -|-+++|..|.| |++.-|+..++.+++.
T Consensus 163 ~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a---~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~ 239 (383)
T 3toy_A 163 YGVLDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRAL---LGPDIALMLDFNQSLDPAEATRRIARLADY 239 (383)
T ss_dssp CSSCCHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHH---HCTTSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred cCCCCHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHH---hCCCCeEEEeCCCCCCHHHHHHHHHHHHhh
Confidence 3337889999999999999 99999998743 4677888888875 367899999988 5566666666666654
No 309
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=67.94 E-value=11 Score=39.01 Aligned_cols=68 Identities=15% Similarity=0.179 Sum_probs=51.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHHhhcCCCCcceeeccCC--CHHHHHHHhhhcCc
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDK 184 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~--~~~A~~l~~I~~~L~~~g~~iPLVADIHF--~~~~Al~Aa~~v~K 184 (640)
-.+.+..++++.++.+.|...+.+-+-. .++.+.++.|++.+ |-++||..|.|- ++.-|+..++.++.
T Consensus 138 ~~~~~~~~~~a~~~~~~G~~~~K~K~G~~~~~d~~~v~avR~~~---g~~~~l~vDan~~~~~~~a~~~~~~l~~ 209 (356)
T 3ro6_B 138 IKPVEETLAEAREHLALGFRVLKVKLCGDEEQDFERLRRLHETL---AGRAVVRVDPNQSYDRDGLLRLDRLVQE 209 (356)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHH---TTSSEEEEECTTCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHHh---CCCCEEEEeCCCCCCHHHHHHHHHHHHh
Confidence 4578999999999999999999998743 46778888888753 568999999884 45555554554444
No 310
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=67.67 E-value=12 Score=39.98 Aligned_cols=62 Identities=21% Similarity=0.371 Sum_probs=48.6
Q ss_pred HHHHHHHHHcCCCEEEE-ecCC--HHHHHHHHHHHHHhhcCCCCcceee-ccCCCHHHHHHHhhh-cCceeeC
Q 006566 121 VEEVMRIADQGADLVRI-TVQG--KREADACFEIKNSLVQKNYNIPLVA-DIHFAPSVALRVAEC-FDKIRVN 188 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRv-tvp~--~~~A~~l~~I~~~L~~~g~~iPLVA-DIHF~~~~Al~Aa~~-v~KVRIN 188 (640)
.+++..+.++|+++|=+ +..+ ....+.++.|++. +++|+++ .+ -++..|..++++ +|-|-+.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~-----~~i~Vi~g~V-~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK-----MNIDVIVGNV-VTEEATKELIENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTT-----CCCEEEEEEE-CSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhc-----CCCeEEEeec-CCHHHHHHHHHcCCCEEEEe
Confidence 68899999999999976 2333 2335677777763 5899996 66 479999999999 9999995
No 311
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=67.57 E-value=13 Score=39.41 Aligned_cols=68 Identities=22% Similarity=0.258 Sum_probs=50.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---------------HHHHHHHHHHHHHhhcCCCCcceeeccCC--CHHHHHH
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG---------------KREADACFEIKNSLVQKNYNIPLVADIHF--APSVALR 177 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~---------------~~~A~~l~~I~~~L~~~g~~iPLVADIHF--~~~~Al~ 177 (640)
.+.+..+++++++.+.|...+.+-+-+ .++.+.++.||+. -|-++||..|.|- ++.-|+.
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a---~G~d~~l~vDaN~~~~~~~A~~ 219 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREA---VGSKADLLFGTHGQMVPSSAIR 219 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHH---HTTSSEEEECCCSCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHH---hCCCCeEEEECCCCCCHHHHHH
Confidence 578999999999999999999997532 2456677777764 3678999999984 4555555
Q ss_pred HhhhcCce
Q 006566 178 VAECFDKI 185 (640)
Q Consensus 178 Aa~~v~KV 185 (640)
.++.+++.
T Consensus 220 ~~~~L~~~ 227 (412)
T 4e4u_A 220 LAKRLEKY 227 (412)
T ss_dssp HHHHHGGG
T ss_pred HHHHhhhc
Confidence 55656554
No 312
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=67.49 E-value=75 Score=34.12 Aligned_cols=146 Identities=11% Similarity=0.034 Sum_probs=79.0
Q ss_pred HHHHcCCCEEEEecCCH----H----H----HHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCC
Q 006566 126 RIADQGADLVRITVQGK----R----E----ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFA 193 (640)
Q Consensus 126 rl~~aGceiVRvtvp~~----~----~----A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~ 193 (640)
.++++|.+.|=+..|+. . . .+....+++.|.+.|..+-+..---|++. .+. -||+.
T Consensus 88 ~~a~lG~~~VE~~~~~~~p~~~~~~e~~~~l~~~~~~lk~~l~~~GL~~~~~t~nl~~h~------~y~------~G~~~ 155 (438)
T 1a0c_A 88 FFDKINAPYFCFHDRDIAPEGDTLRETNKNLDTIVAMIKDYLKTSKTKVLWGTANLFSNP------RFV------HGAST 155 (438)
T ss_dssp HHHHHTCSEEEEEHHHHSCCCSSHHHHHHHHHHHHHHHHHHHTTCSCEEEEEECCCSSSG------GGT------TCSTT
T ss_pred HHHHcCCCEEEeccccccccccchhhhhccHHHHHHHHHHHHHHhCCceEeccccccCCC------ccc------cCCCC
Confidence 38999999998874332 1 1 23345677777766665443322122211 111 15554
Q ss_pred chhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCCh----HHHHHHHHHHHHHH
Q 006566 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSP----RGMVESAFEFARIC 269 (640)
Q Consensus 194 d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp----~gMVeSAle~~~i~ 269 (640)
+... +..++-.+.++.-++.|++.|.. .+-+-.|+-... ..++... +-++++--+-++.+
T Consensus 156 spd~-------------evR~~ai~~lk~aId~A~~LGa~-~vv~~~G~~G~~--~~~~~~~~~~~~~~~e~L~~~~~~A 219 (438)
T 1a0c_A 156 SCNA-------------DVFAYSAAQVKKALEITKELGGE-NYVFWGGREGYE--TLLNTDMEFELDNFARFLHMAVDYA 219 (438)
T ss_dssp CSCH-------------HHHHHHHHHHHHHHHHHHHTTCS-EEEECCTTSEES--CGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCH-------------HHHHHHHHHHHHHHHHHHHcCCC-EEEEccCCCccc--cCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4331 11233445577789999999988 466655652100 0011111 33566666666777
Q ss_pred HHCCCC-cEEEEEEe-----CChhhHHHHHHHHHHH
Q 006566 270 RKLDFH-NFLFSMKA-----SNPVVMVQAYRLLVAE 299 (640)
Q Consensus 270 e~~~F~-diviSmKs-----Sn~~~mV~AyRlL~~~ 299 (640)
++.|+. .+.|--|. ++...+++....|+++
T Consensus 220 ~~~Gv~v~l~IEp~p~~~~~~~~~~t~~~al~li~~ 255 (438)
T 1a0c_A 220 KEIGFEGQFLIEPKPKEPTKHQYDFDVANVLAFLRK 255 (438)
T ss_dssp HHTTCCSEEEECCCSCSSSSEESSCSHHHHHHHHHH
T ss_pred HhcCCCcEEEEeeCCCCCCCCcccCCHHHHHHHHHH
Confidence 888885 77777664 2233345555555555
No 313
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=67.42 E-value=22 Score=37.32 Aligned_cols=68 Identities=12% Similarity=0.161 Sum_probs=53.0
Q ss_pred CCHHHHHHHHHHHHHc---CCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 115 KDVAGTVEEVMRIADQ---GADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~a---GceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.+.+..++++++..+. |...+.+-+-. .++.+.++.||+. -|-+++|..|.| |++.-|+..++.+++.
T Consensus 170 ~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a---~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~ 245 (390)
T 3ugv_A 170 SPAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDA---VGRDTALMVDFNQGLDMAEAMHRTRQIDDL 245 (390)
T ss_dssp CHHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHH---HCTTSEEEEECTTCCCHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHH---hCCCCEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 6789999999999999 99999998743 4677888888875 366899999988 4555566666666654
No 314
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=67.11 E-value=9.4 Score=39.27 Aligned_cols=110 Identities=18% Similarity=0.238 Sum_probs=74.4
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (640)
+|.+-.|+|=- |. .-|.+.+++-+++|.+.+-+.+===++ .++-+.+++++++ +++|+.+|=++. +.-+.
T Consensus 185 ~g~~~~l~vDa--N~-~~~~~~A~~~~~~l~~~~~~~iEeP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~ 255 (370)
T 2chr_A 185 LGSKAYLRVDV--NQ-AWDEQVASVYIPELEALGVELIEQPVG-RENTQALRRLSDN-----NRVAIMADESLSTLASAF 255 (370)
T ss_dssp TTTTSEEEEEC--TT-CCCTHHHHHHHHHHHTTTCCEEECCSC-SSCHHHHHHHHHH-----CSSEEEESSSCCSHHHHH
T ss_pred cCCCcEEEecC--CC-CCCHHHHHHHHHHHHhcCCceecCCCC-hhhhhhhhHHhhh-----ccCCccCCccCCCHHHHH
Confidence 45666666532 22 235667777777888877776542222 2356778888875 889999997654 44455
Q ss_pred HHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 177 ~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
..++ ++|=|++.|...|.-.. ...+...|+++|+++=+|.
T Consensus 256 ~~~~~~a~d~i~~d~~~~GGit~----------------------~~~ia~~A~~~gi~~~~~~ 297 (370)
T 2chr_A 256 DLARDRSVDVFSLKLCNMGGVSA----------------------TQKIAAVAEASGIASYGGT 297 (370)
T ss_dssp HHHTTTCCSEECCCHHHHTSHHH----------------------HHHHHHHHHHHTCEECCCC
T ss_pred HHHHcCCCcEEEeCCcccCCHHH----------------------HHHHHHHHHHcCCeEEeCC
Confidence 5554 38889999998887432 6788999999999874443
No 315
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=66.96 E-value=26 Score=34.21 Aligned_cols=142 Identities=18% Similarity=0.204 Sum_probs=83.5
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeecc-C--------CC---HHHHHHHhhh-cCce--
Q 006566 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI-H--------FA---PSVALRVAEC-FDKI-- 185 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADI-H--------F~---~~~Al~Aa~~-v~KV-- 185 (640)
.+.+..+.+.|+..|-++ + ..++.+++.+ .-++|++..+ | .+ ...+..|++. ++.|
T Consensus 48 ~~~~~~~~~~g~~~i~~~-~-----~~~~~~~~~~---~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~v~~ 118 (273)
T 2qjg_A 48 RKTVNDVAEGGANAVLLH-K-----GIVRHGHRGY---GKDVGLIIHLSGGTAISPNPLKKVIVTTVEEAIRMGADAVSI 118 (273)
T ss_dssp HHHHHHHHHHTCSEEEEC-H-----HHHHSCCCSS---SCCCEEEEECEECCTTSSSTTCCEECSCHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEeC-H-----HHHHHHHHhh---cCCCCEEEEEcCCCcCCCCcccchHHHHHHHHHHcCCCEEEE
Confidence 456777788999999743 2 1222222211 2257877432 1 12 4567788888 9999
Q ss_pred eeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCC-CCCcHhHHHHhCCChHHHHHHHHH
Q 006566 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH-GSLSDRIMSYYGDSPRGMVESAFE 264 (640)
Q Consensus 186 RINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNh-GSLs~ril~ryGdtp~gMVeSAle 264 (640)
.+|+|.... + ...+.+..+++.|+++|+++=|.+.. |- .+ +-|.++ ++..+
T Consensus 119 ~l~~~~~~~-~------------------~~~~~~~~v~~~~~~~g~~viv~~~~~G~---~l--~~~~~~----~~~~~ 170 (273)
T 2qjg_A 119 HVNVGSDED-W------------------EAYRDLGMIAETCEYWGMPLIAMMYPRGK---HI--QNERDP----ELVAH 170 (273)
T ss_dssp EEEETSTTH-H------------------HHHHHHHHHHHHHHHHTCCEEEEEEECST---TC--SCTTCH----HHHHH
T ss_pred EEecCCCCH-H------------------HHHHHHHHHHHHHHHcCCCEEEEeCCCCc---cc--CCCCCH----hHHHH
Confidence 999886522 1 12245778999999999998665421 11 00 012233 23334
Q ss_pred HHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcce
Q 006566 265 FARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPL 309 (640)
Q Consensus 265 ~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPL 309 (640)
.++.+++.|-+=+.++- + .-++..+.+.+. .+.|+
T Consensus 171 ~a~~a~~~Gad~i~~~~----~-~~~~~l~~i~~~-----~~ipv 205 (273)
T 2qjg_A 171 AARLGAELGADIVKTSY----T-GDIDSFRDVVKG-----CPAPV 205 (273)
T ss_dssp HHHHHHHTTCSEEEECC----C-SSHHHHHHHHHH-----CSSCE
T ss_pred HHHHHHHcCCCEEEECC----C-CCHHHHHHHHHh-----CCCCE
Confidence 45889999998666652 1 235555666665 56776
No 316
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=66.58 E-value=45 Score=34.51 Aligned_cols=158 Identities=14% Similarity=0.075 Sum_probs=92.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCH-H----------HHHHHHHHHHHhhcCCCCcceeecc--CC--CHHHHHH
Q 006566 113 DTKDVAGTVEEVMRIADQGADLVRITVQGK-R----------EADACFEIKNSLVQKNYNIPLVADI--HF--APSVALR 177 (640)
Q Consensus 113 ~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~-~----------~A~~l~~I~~~L~~~g~~iPLVADI--HF--~~~~Al~ 177 (640)
....++.-++=+.+|.++|.++|=++.|.- + ..+.++.|++ + .+..+...+.- +. |-+-+..
T Consensus 19 ~~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~-~--~~~~~~~L~r~~~~~~~dv~~~~~ 95 (320)
T 3dxi_A 19 WDFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRN-I--STKKIAIMLNEKNTTPEDLNHLLL 95 (320)
T ss_dssp TCCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHH-H--CCSEEEEEEEGGGCCGGGHHHHHG
T ss_pred CcCCHHHHHHHHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhh-c--cCCeEEEEecCCCCChhhHHHHHH
Confidence 346788888889999999999999996431 1 1577788876 2 34444333321 11 2233444
Q ss_pred Hhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChH
Q 006566 178 VAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPR 256 (640)
Q Consensus 178 Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~ 256 (640)
|... ++-|||- +..+ + -+.+.++|+.||++|..++..+-.. +.|- +++
T Consensus 96 a~~~Gvd~~ri~-----~~~~--------------n----le~~~~~v~~ak~~G~~v~~~~~~~-------~~~~-~~~ 144 (320)
T 3dxi_A 96 PIIGLVDMIRIA-----IDPQ--------------N----IDRAIVLAKAIKTMGFEVGFNVMYM-------SKWA-EMN 144 (320)
T ss_dssp GGTTTCSEEEEE-----ECGG--------------G----HHHHHHHHHHHHTTTCEEEEEECCT-------TTGG-GST
T ss_pred hhhcCCCEEEEE-----ecHH--------------H----HHHHHHHHHHHHHCCCEEEEEEEeC-------CCCC-CHH
Confidence 4445 8888875 1111 0 2347789999999999988766432 1111 122
Q ss_pred HHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEEE
Q 006566 257 GMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLG 312 (640)
Q Consensus 257 gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLG 312 (640)
..++-+.+ + +.|-+ .|++|-+.=..+=+.++.+++.+.++ ++-|+|+.
T Consensus 145 ~~l~~~~~---~--~~G~~--~i~l~Dt~G~~~P~~~~~lv~~l~~~-~~~~i~~H 192 (320)
T 3dxi_A 145 GFLSKLKA---I--DKIAD--LFCMVDSFGGITPKEVKNLLKEVRKY-THVPVGFH 192 (320)
T ss_dssp TSGGGGGG---G--TTTCS--EEEEECTTSCCCHHHHHHHHHHHHHH-CCSCEEEE
T ss_pred HHHHHHHH---h--hCCCC--EEEECcccCCCCHHHHHHHHHHHHHh-CCCeEEEE
Confidence 22222222 1 34654 78999876554555555555555443 45677654
No 317
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=66.29 E-value=52 Score=35.11 Aligned_cols=92 Identities=14% Similarity=0.332 Sum_probs=52.2
Q ss_pred HHHHHHHcCCCEEEEec-------------CCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCC
Q 006566 123 EVMRIADQGADLVRITV-------------QGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189 (640)
Q Consensus 123 Qi~rl~~aGceiVRvtv-------------p~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINP 189 (640)
....|.++|+..|||.+ ++.-+.+.+..+-++-++.| +-++-|+||... ++ .|
T Consensus 53 ~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~G--LkVlldfHysD~-------Wa-----dP 118 (399)
T 1ur4_A 53 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANG--MKLLADFHYSDF-------WA-----DP 118 (399)
T ss_dssp HHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTT--CEEEEEECSSSS-------CC-----SS
T ss_pred HHHHHHHCCCCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCC--CEEEEEeccCCc-------cC-----Cc
Confidence 36677889999999842 12222333333333334445 456669999752 12 36
Q ss_pred CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 190 GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
|.-..++ .|... + +.+-.+.+.+.-..+++..|++|..+
T Consensus 119 g~Q~~P~-aW~~~--~---~~~l~~~~~~yt~~~l~~l~~~g~~~ 157 (399)
T 1ur4_A 119 AKQKAPK-AWANL--N---FEDKKTALYQYTKQSLKAMKAAGIDI 157 (399)
T ss_dssp SCCCCCG-GGTTC--C---HHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred ccccCcc-ccccC--C---HHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 6554433 35542 2 23333455666667778888888643
No 318
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=66.26 E-value=9.6 Score=40.00 Aligned_cols=66 Identities=17% Similarity=0.253 Sum_probs=43.8
Q ss_pred HHHHHHHHHHcCCCEEEEec-C------------CHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cCc
Q 006566 120 TVEEVMRIADQGADLVRITV-Q------------GKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDK 184 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtv-p------------~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~K 184 (640)
|.+++++++++|+|.|-+.. | +.-...++.++.+... .+++|+|||-=. ++.-+.+|+.. ++.
T Consensus 155 t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~--~~~iPVIA~GGI~~~~di~kala~GAd~ 232 (361)
T 3khj_A 155 TEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVAS--KFGIPIIADGGIRYSGDIGKALAVGASS 232 (361)
T ss_dssp SHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHH--HHTCCEEEESCCCSHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHh--hcCCeEEEECCCCCHHHHHHHHHcCCCE
Confidence 56788999999999999841 0 1224556666654322 257999998554 56666666666 776
Q ss_pred eee
Q 006566 185 IRV 187 (640)
Q Consensus 185 VRI 187 (640)
|=+
T Consensus 233 V~v 235 (361)
T 3khj_A 233 VMI 235 (361)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 319
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=66.02 E-value=26 Score=37.48 Aligned_cols=99 Identities=12% Similarity=0.131 Sum_probs=75.6
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEEecC-CHHHHHHHHHHHHHhhcCCCCcceeecc--CCCHHHHHHHhhh--cCceeeC
Q 006566 115 KDVAGTVEEVMRIAD-QGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADI--HFAPSVALRVAEC--FDKIRVN 188 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~-aGceiVRvtvp-~~~~A~~l~~I~~~L~~~g~~iPLVADI--HF~~~~Al~Aa~~--v~KVRIN 188 (640)
-+.+..++-+++|.+ .+ |.=|-=| ..++-+.+..+++++ |.++||++|= .+++.-...+++. ++-|.|.
T Consensus 279 ~t~~eai~~~~~l~~~~~--i~~iEePl~~~d~~~~~~l~~~~---~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik 353 (444)
T 1w6t_A 279 RTSAEQIDYLEELVNKYP--IITIEDGMDENDWDGWKALTERL---GKKVQLVGDDFFVTNTDYLARGIQEGAANSILIK 353 (444)
T ss_dssp ECHHHHHHHHHHHHHHSC--EEEEESCSCTTCHHHHHHHHHHH---TTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC
T ss_pred CCHHHHHHHHHHHHHhCC--cEEEECCCChhhHHHHHHHHHhh---CCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEc
Confidence 467778888888875 54 6666655 345788999999863 3489999995 5677777777754 9999999
Q ss_pred CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCC
Q 006566 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH 240 (640)
Q Consensus 189 PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNh 240 (640)
|..+|.-.. ...++..|+++|+++=+|-+.
T Consensus 354 ~~~~GGite----------------------a~~ia~lA~~~g~~v~~~h~~ 383 (444)
T 1w6t_A 354 VNQIGTLTE----------------------TFEAIEMAKEAGYTAVVSHRS 383 (444)
T ss_dssp HHHHCSHHH----------------------HHHHHHHHHHTTCEEEEECCS
T ss_pred ccccCCHHH----------------------HHHHHHHHHHCCCeEEecCCC
Confidence 999987432 677899999999999887655
No 320
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=65.71 E-value=20 Score=38.54 Aligned_cols=99 Identities=13% Similarity=0.070 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHHH-HcCCCEEEEecC-CHHHHHHHHHHHHHhhcCCCCcceeeccCC--CHHHHHHHhhh--cCceeeCC
Q 006566 116 DVAGTVEEVMRIA-DQGADLVRITVQ-GKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAEC--FDKIRVNP 189 (640)
Q Consensus 116 Dv~atv~Qi~rl~-~aGceiVRvtvp-~~~~A~~l~~I~~~L~~~g~~iPLVADIHF--~~~~Al~Aa~~--v~KVRINP 189 (640)
+.+..++...++. +.+ |+=|-=| ..++-+.++.++++ .++||++|=-| +++-+..+++. ++-|.|.|
T Consensus 274 t~~eai~~~~~~l~~y~--i~~iEdPl~~dD~~g~~~l~~~-----~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv 346 (436)
T 2al1_A 274 TGPQLADLYHSLMKRYP--IVSIEDPFAEDDWEAWSHFFKT-----AGIQIVADDLTVTNPKRIATAIEKKAADALLLKV 346 (436)
T ss_dssp CHHHHHHHHHHHHHHSC--EEEEECCSCTTCHHHHHHHHTT-----CCSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH
T ss_pred CHHHHHHHHHHHHHhCC--cEEEECCCCCcCHHHHHHHHhc-----CCCeEEECCcccCCHHHHHHHHHhCCCCEEEech
Confidence 5566677766654 454 6666655 55678888888874 88999999754 78888888876 99999999
Q ss_pred CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCC
Q 006566 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (640)
Q Consensus 190 GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSL 243 (640)
..+|.=.. ...+++.|+.+|+.+=+|-.+|.-
T Consensus 347 ~qiGGite----------------------a~~ia~lA~~~g~~~~~sh~sgEt 378 (436)
T 2al1_A 347 NQIGTLSE----------------------SIKAAQDSFAAGWGVMVSHRSGET 378 (436)
T ss_dssp HHHCCHHH----------------------HHHHHHHHHHTTCEEEEECCSBCC
T ss_pred hhcCCHHH----------------------HHHHHHHHHHcCCeEEEecCCCch
Confidence 99988432 677899999999988666555543
No 321
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=65.52 E-value=14 Score=38.67 Aligned_cols=67 Identities=10% Similarity=0.060 Sum_probs=50.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccCC--CHHHHHHHhhhcCc
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDK 184 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIHF--~~~~Al~Aa~~v~K 184 (640)
..|.+..++++.++.+.|...+.+-+-. .++.+.++.|++.+ -+++|..|.|- ++.-|+..++.++.
T Consensus 146 ~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~----~~~~l~vDan~~~~~~~A~~~~~~L~~ 217 (385)
T 3i6e_A 146 NPDFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDF----PEFRVRVDYNQGLEIDEAVPRVLDVAQ 217 (385)
T ss_dssp CSSHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHC----TTSEEEEECTTCCCGGGHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhC----CCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 3578889999999999999999998753 46888888888864 45899999874 45555555554444
No 322
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=65.35 E-value=79 Score=32.51 Aligned_cols=153 Identities=16% Similarity=0.185 Sum_probs=95.6
Q ss_pred HHHHcCCCEEEEecCC---------------H-HHHHHHHHHHHHhhcCCCC-cceeeccCC-----CHHHHHH----Hh
Q 006566 126 RIADQGADLVRITVQG---------------K-READACFEIKNSLVQKNYN-IPLVADIHF-----APSVALR----VA 179 (640)
Q Consensus 126 rl~~aGceiVRvtvp~---------------~-~~A~~l~~I~~~L~~~g~~-iPLVADIHF-----~~~~Al~----Aa 179 (640)
-+.++|+|++ ++--+ + +-....+.|++ +.+ .++|||.=| +|.-|.. .+
T Consensus 49 l~e~aG~d~i-lvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r-----~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~ 122 (281)
T 1oy0_A 49 IFDEAGIPVL-LVGDSAANVVYGYDTTVPISIDELIPLVRGVVR-----GAPHALVVADLPFGSYEAGPTAALAAATRFL 122 (281)
T ss_dssp HHHTTTCCEE-EECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHH-----HCTTSEEEEECCTTSSTTCHHHHHHHHHHHH
T ss_pred HHHHcCCCEE-EECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHh-----cCCCCeEEEECCCCcccCCHHHHHHHHHHHH
Confidence 3567999999 43211 1 22345666666 576 557799999 4554433 23
Q ss_pred h-h-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE--EEeeCCCCCcHhHHHHh---C
Q 006566 180 E-C-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV--RIGTNHGSLSDRIMSYY---G 252 (640)
Q Consensus 180 ~-~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI--RIGvNhGSLs~ril~ry---G 252 (640)
+ . ++.|-|-=| . .+.+.|+.+.+.|+|+ -||.+-=|.... .-| |
T Consensus 123 ~eaGa~aVklEdg-----~----------------------e~~~~I~al~~agIpV~gHiGLtPqsv~~~--ggf~v~g 173 (281)
T 1oy0_A 123 KDGGAHAVKLEGG-----E----------------------RVAEQIACLTAAGIPVMAHIGFTPQSVNTL--GGFRVQG 173 (281)
T ss_dssp HTTCCSEEEEEBS-----G----------------------GGHHHHHHHHHHTCCEEEEEECCC---------------
T ss_pred HHhCCeEEEECCc-----H----------------------HHHHHHHHHHHCCCCEEeeecCCcceeccc--CCeEEEe
Confidence 3 3 566655544 1 2566778888899986 578765554322 112 3
Q ss_pred CChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHH
Q 006566 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAI 328 (640)
Q Consensus 253 dtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAi 328 (640)
.|. -.+.+++-++-+++.|=.-+++-+-. -+..+.+.++ ++-|+- | -=||..-||+|--.-
T Consensus 174 rt~--~a~~~i~rA~a~~eAGA~~ivlE~vp------~~~a~~it~~-----l~iP~i-g-IGaG~~~dgQvLV~~ 234 (281)
T 1oy0_A 174 RGD--AAEQTIADAIAVAEAGAFAVVMEMVP------AELATQITGK-----LTIPTV-G-IGAGPNCDGQVLVWQ 234 (281)
T ss_dssp -CH--HHHHHHHHHHHHHHHTCSEEEEESCC------HHHHHHHHHH-----CSSCEE-E-ESSCSCSSEEEECHH
T ss_pred CcH--HHHHHHHHHHHHHHcCCcEEEEecCC------HHHHHHHHHh-----CCCCEE-E-eCCCCCCCcceeeHh
Confidence 344 45999999999999999999987632 1345677787 788863 3 348999999986544
No 323
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=64.90 E-value=9.3 Score=40.37 Aligned_cols=66 Identities=18% Similarity=0.229 Sum_probs=47.0
Q ss_pred HHHHHHHHHHcCCCEEEEe--------c-----CCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cCc
Q 006566 120 TVEEVMRIADQGADLVRIT--------V-----QGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDK 184 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvt--------v-----p~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~K 184 (640)
|.+++++++++|+|.|.+. + .+.....++.++++.++ .+++|+|||-=. ++.-+.+|+.. ++.
T Consensus 159 t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~--~~~iPVIA~GGI~~~~di~kala~GAd~ 236 (366)
T 4fo4_A 159 TAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVAN--EYGIPVIADGGIRFSGDISKAIAAGASC 236 (366)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHG--GGTCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHh--hcCCeEEEeCCCCCHHHHHHHHHcCCCE
Confidence 5788999999999999992 1 11235667777776432 367999998666 56666677776 777
Q ss_pred eee
Q 006566 185 IRV 187 (640)
Q Consensus 185 VRI 187 (640)
|=+
T Consensus 237 V~v 239 (366)
T 4fo4_A 237 VMV 239 (366)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 324
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=64.89 E-value=19 Score=38.08 Aligned_cols=65 Identities=18% Similarity=0.220 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC-C--HHHHHHHHHHHHHhhcCCCCcceee-ccCCCHHHHHHHhhh-cCceee
Q 006566 118 AGTVEEVMRIADQGADLVRITVQ-G--KREADACFEIKNSLVQKNYNIPLVA-DIHFAPSVALRVAEC-FDKIRV 187 (640)
Q Consensus 118 ~atv~Qi~rl~~aGceiVRvtvp-~--~~~A~~l~~I~~~L~~~g~~iPLVA-DIHF~~~~Al~Aa~~-v~KVRI 187 (640)
+.+.+.+.++.++|+|+|=+.++ + ..-.+.++.||+. .-++|+++ .+ .++..|..++++ +|-|-+
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~----~~~~~Vi~G~V-~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL----LGSRCIMAGNV-ATYAGADYLASCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH----HTTCEEEEEEE-CSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh----cCCCeEEEcCc-CCHHHHHHHHHcCCCEEEE
Confidence 56788999999999999877433 1 2223456666664 22699999 66 579999999999 999997
No 325
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=64.67 E-value=20 Score=34.27 Aligned_cols=95 Identities=13% Similarity=0.118 Sum_probs=62.2
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH-H-HHHHHHHHHHHhhcCCCCcceeeccCCC--H-HHHHHHhhh-cCc
Q 006566 111 TNDTKDVAGTVEEVMRIADQGADLVRITVQGK-R-EADACFEIKNSLVQKNYNIPLVADIHFA--P-SVALRVAEC-FDK 184 (640)
Q Consensus 111 ~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~-~-~A~~l~~I~~~L~~~g~~iPLVADIHF~--~-~~Al~Aa~~-v~K 184 (640)
.-|..|.+.+++.++++ +.|++++=+..|-. . --+.++.||+ ...+.|++.|.|+. | ..+..++++ ++-
T Consensus 12 alD~~~~~~~~~~~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~----~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~ 86 (218)
T 3jr2_A 12 ALDQTNLTDAVAVASNV-ASYVDVIEVGTILAFAEGMKAVSTLRH----NHPNHILVCDMKTTDGGAILSRMAFEAGADW 86 (218)
T ss_dssp EECCSSHHHHHHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHH----HCTTSEEEEEEEECSCHHHHHHHHHHHTCSE
T ss_pred EeCCCCHHHHHHHHHHh-cCCceEEEeCcHHHHhcCHHHHHHHHH----hCCCCcEEEEEeecccHHHHHHHHHhcCCCE
Confidence 34778999999999996 67999999985421 1 1233444444 33468999999985 3 345666666 666
Q ss_pred eeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 185 IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 185 VRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
|=+-.-. .. +.+.++++.||++|+..
T Consensus 87 i~vh~~~-~~-----------------------~~~~~~~~~~~~~g~~~ 112 (218)
T 3jr2_A 87 ITVSAAA-HI-----------------------ATIAACKKVADELNGEI 112 (218)
T ss_dssp EEEETTS-CH-----------------------HHHHHHHHHHHHHTCEE
T ss_pred EEEecCC-CH-----------------------HHHHHHHHHHHHhCCcc
Confidence 5442211 11 12567889999999865
No 326
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=64.58 E-value=10 Score=40.01 Aligned_cols=96 Identities=9% Similarity=0.087 Sum_probs=65.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh--cCceeeCCCC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC--FDKIRVNPGN 191 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~--v~KVRINPGN 191 (640)
-|.+.+++-+++|.+.|...+===+| .++.+.++++++ .+++||.+|=++ ++.-+..+++. ++-|.|.+..
T Consensus 232 ~~~~~A~~~~~~l~~~~i~~iEeP~~-~~d~~~~~~l~~-----~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~ 305 (421)
T 4hnl_A 232 LHPNQAIQFAKAAEPYQLFFLEDILP-PDQSHWLTQLRS-----QSATPIATGELFNNPMEWQELVKNRQIDFMRAHVSQ 305 (421)
T ss_dssp SCHHHHHHHHHHHGGGCCSEEECCSC-GGGGGGHHHHHT-----TCCCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGG
T ss_pred CCHHHHHHHHHHhhhhhhcccccCCc-ccchHHHHHHHh-----cCCCCeecCcceehhHHHHHHHhcCCceEEEeCCCC
Confidence 35666666667777766655432222 345666777776 488999999655 45555555554 8999999999
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.|.-.. ...+...|+++|+++=++.
T Consensus 306 ~GGite----------------------~~~ia~~A~~~gi~v~~h~ 330 (421)
T 4hnl_A 306 IGGITP----------------------ALKLAHFCDAMGVRIAWHT 330 (421)
T ss_dssp GTSHHH----------------------HHHHHHHHHHTTCEECCCC
T ss_pred CCCHHH----------------------HHHHHHHHHHCCCeEEEeC
Confidence 987432 6789999999999984443
No 327
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=64.01 E-value=12 Score=38.80 Aligned_cols=113 Identities=19% Similarity=0.263 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHcCCCEEEEe------------------------cC---CHHH-----------HHHHHHHHHHhhcCCC
Q 006566 119 GTVEEVMRIADQGADLVRIT------------------------VQ---GKRE-----------ADACFEIKNSLVQKNY 160 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvt------------------------vp---~~~~-----------A~~l~~I~~~L~~~g~ 160 (640)
.++.+..|-+++||++||-| .. +.++ -+.+++|++. .
T Consensus 123 ~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~-----~ 197 (291)
T 3o07_A 123 KDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEK-----G 197 (291)
T ss_dssp SSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHH-----T
T ss_pred CCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHc-----c
Confidence 35677888888999999987 11 2221 2345556553 5
Q ss_pred Ccceee--ccCC-CHHHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEE
Q 006566 161 NIPLVA--DIHF-APSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (640)
Q Consensus 161 ~iPLVA--DIHF-~~~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRI 236 (640)
++|+|+ --.. +|.-|..+++. ++.|=|.=|=+..+.- ...-..|.+.+++-++ -.-|.+..+.+|-+| .
T Consensus 198 ~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP-----~~~Akafv~Av~~~~~-~~~~~~~s~~l~~~m-~ 270 (291)
T 3o07_A 198 KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNP-----VRLATAVVEATTHFDN-PSKLLEVSSDLGELM-G 270 (291)
T ss_dssp SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCH-----HHHHHHHHHHHHTTTC-HHHHHHHHSSCCCC---
T ss_pred CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCH-----HHHHHHHHHHHHhccC-HHHHHHHHhcccccc-c
Confidence 788863 3444 68888888887 9999998888764321 1123446666665544 567889999999999 4
Q ss_pred eeCCCCC
Q 006566 237 GTNHGSL 243 (640)
Q Consensus 237 GvNhGSL 243 (640)
|.|--+|
T Consensus 271 g~~~~~~ 277 (291)
T 3o07_A 271 GVSIESI 277 (291)
T ss_dssp -------
T ss_pred Ccchhhh
Confidence 8988888
No 328
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=63.79 E-value=23 Score=37.27 Aligned_cols=68 Identities=19% Similarity=0.322 Sum_probs=51.5
Q ss_pred CCHHHHHHHH-HHHHHcCCCEEEEecCC---------HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhc
Q 006566 115 KDVAGTVEEV-MRIADQGADLVRITVQG---------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECF 182 (640)
Q Consensus 115 ~Dv~atv~Qi-~rl~~aGceiVRvtvp~---------~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v 182 (640)
.+.+..++++ ++..+.|...+.+-+-. .++.+.++.||+.+ |-++||..|.| |++.-|+..++.+
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~---g~~~~l~vDaN~~~~~~~A~~~~~~L 214 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELL---GPDAVIGFDANNGYSVGGAIRVGRAL 214 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHH---CTTCCEEEECTTCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHHH
Confidence 4578999999 99999999999998743 45677777777742 66899999988 5566666655555
Q ss_pred Cce
Q 006566 183 DKI 185 (640)
Q Consensus 183 ~KV 185 (640)
++.
T Consensus 215 ~~~ 217 (393)
T 4dwd_A 215 EDL 217 (393)
T ss_dssp HHT
T ss_pred Hhh
Confidence 543
No 329
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=63.49 E-value=18 Score=37.69 Aligned_cols=84 Identities=19% Similarity=0.293 Sum_probs=55.9
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHH-cCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccCCC--
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD-QGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHFA-- 171 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~-aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-- 171 (640)
+||..+=+|..-.+....|.+..++++.+..+ .|...+.+-+-. .++.+.++.|++.+ |-+++|..|.|-.
T Consensus 130 LGg~~r~~v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~---g~~~~l~vDaN~~~~ 206 (382)
T 3dgb_A 130 LGGRVRDALPVAWTLASGDTAKDIAEAQKMLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKAL---GDSASVRVDVNQAWD 206 (382)
T ss_dssp TTCCSCSEEEBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHH---GGGSEEEEECTTCBC
T ss_pred hCCCCCCeeeEEEEecCCChHHHHHHHHHHHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHc---CCCCeEEEeCCCCCC
Confidence 46644333333322334578889999998877 699999998743 56788888888753 5679999998755
Q ss_pred HHHHHHHhhhcCc
Q 006566 172 PSVALRVAECFDK 184 (640)
Q Consensus 172 ~~~Al~Aa~~v~K 184 (640)
+.-|+..++.+++
T Consensus 207 ~~~A~~~~~~l~~ 219 (382)
T 3dgb_A 207 EAVALRACRILGG 219 (382)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh
Confidence 4445444444444
No 330
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=63.48 E-value=1e+02 Score=31.59 Aligned_cols=153 Identities=16% Similarity=0.178 Sum_probs=95.8
Q ss_pred HHHHcCCCEEEEecCC---------------HH-HHHHHHHHHHHhhcCCCC-cceeeccCC-----CHHHHHH----Hh
Q 006566 126 RIADQGADLVRITVQG---------------KR-EADACFEIKNSLVQKNYN-IPLVADIHF-----APSVALR----VA 179 (640)
Q Consensus 126 rl~~aGceiVRvtvp~---------------~~-~A~~l~~I~~~L~~~g~~-iPLVADIHF-----~~~~Al~----Aa 179 (640)
-+.++|+|++ ++--+ ++ -....+.|++ +.+ .|+|||.=| +|.-|.. .+
T Consensus 32 l~e~aG~d~i-lvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r-----~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~ 105 (275)
T 1o66_A 32 LMDDAGVEML-LVGDSLGMAVQGRKSTLPVSLRDMCYHTECVAR-----GAKNAMIVSDLPFGAYQQSKEQAFAAAAELM 105 (275)
T ss_dssp HHHHTTCCEE-EECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHH-----HCSSSEEEEECCTTSSSSCHHHHHHHHHHHH
T ss_pred HHHHcCCCEE-EECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHh-----hCCCCeEEEECCCCCccCCHHHHHHHHHHHH
Confidence 3567999999 43211 22 2334555665 577 468899999 4554543 23
Q ss_pred hh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE--EEeeCCCCCcHhHHHHh---CC
Q 006566 180 EC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV--RIGTNHGSLSDRIMSYY---GD 253 (640)
Q Consensus 180 ~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI--RIGvNhGSLs~ril~ry---Gd 253 (640)
+. ++.|-|-=| . .+.+.|+.+.+.|+|+ -||.+-=|.... .-| |.
T Consensus 106 kaGa~aVklEdg-----~----------------------e~~~~I~al~~agIpV~gHiGLtPQs~~~~--ggf~v~gr 156 (275)
T 1o66_A 106 AAGAHMVKLEGG-----V----------------------WMAETTEFLQMRGIPVCAHIGLTPQSVFAF--GGYKVQGR 156 (275)
T ss_dssp HTTCSEEEEECS-----G----------------------GGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------
T ss_pred HcCCcEEEECCc-----H----------------------HHHHHHHHHHHcCCCeEeeeccCceeeccc--CCeEEEeC
Confidence 33 566655544 1 2567788888999986 577655443211 111 43
Q ss_pred ChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHH
Q 006566 254 SPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAI 328 (640)
Q Consensus 254 tp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAi 328 (640)
| +. .+.+++-++-+++.|=.-+++-+-. -+..+.+.++ ++-|+- | -=||..-||+|--.-
T Consensus 157 t-~~-a~~~i~rA~a~~eAGA~~ivlE~vp------~~~a~~it~~-----l~iP~i-g-IGaG~~~dgQvLV~~ 216 (275)
T 1o66_A 157 G-GK-AQALLNDAKAHDDAGAAVVLMECVL------AELAKKVTET-----VSCPTI-G-IGAGADCDGQVLVMH 216 (275)
T ss_dssp ---C-HHHHHHHHHHHHHTTCSEEEEESCC------HHHHHHHHHH-----CSSCEE-E-ESSCSCSSEEEECHH
T ss_pred h-HH-HHHHHHHHHHHHHcCCcEEEEecCC------HHHHHHHHHh-----CCCCEE-E-ECCCCCCCcceeeHH
Confidence 4 22 4899999999999999999987632 1345677887 788863 3 348999999986544
No 331
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=63.48 E-value=26 Score=35.74 Aligned_cols=155 Identities=14% Similarity=0.202 Sum_probs=93.1
Q ss_pred HHHHHHc-CCCEEEEecCCH-----HHHHHHHHHHHHhhcCCCCcceeeccCCCH-----------------HHHHHHhh
Q 006566 124 VMRIADQ-GADLVRITVQGK-----READACFEIKNSLVQKNYNIPLVADIHFAP-----------------SVALRVAE 180 (640)
Q Consensus 124 i~rl~~a-GceiVRvtvp~~-----~~A~~l~~I~~~L~~~g~~iPLVADIHF~~-----------------~~Al~Aa~ 180 (640)
+..+.++ |.+-|=++.+.. -..+.+.++++.|.+.|..+..+.++-+.+ +....|.+
T Consensus 27 L~~i~~~~G~~~ve~~~~~~~~g~~~~~~~~~~~~~~l~~~GL~i~~~~~~~~~~~~~~~~~~r~~~i~~~~~~i~~a~~ 106 (367)
T 1tz9_A 27 LKHIRQIPGITGVVGTLLNKLPGDVWTVAEIQALKQSVEQEGLALLGIESVAIHDAIKAGTDQRDHYIDNYRQTLRNLGK 106 (367)
T ss_dssp HHHHTTSTTCCEEEECCSSSCTTCCCCHHHHHHHHHHHHHTTCEEEEECSCCCCHHHHHTCSTHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCeEEecCCCCCCCCCCCHHHHHHHHHHHHHCCCeEEEEecCCCcHHHhcCCcCHHHHHHHHHHHHHHHHH
Confidence 4566778 998887765432 123467778888888898888766554443 11223444
Q ss_pred h-cCceeeC--C-CCCCchhh-----------hc-----ccc----------------------------------ccch
Q 006566 181 C-FDKIRVN--P-GNFADRRA-----------QF-----EQL----------------------------------EYTD 206 (640)
Q Consensus 181 ~-v~KVRIN--P-GN~~d~~k-----------~F-----~~~----------------------------------eYtd 206 (640)
. +.-|.+| | ++...... .| +.. .|.+
T Consensus 107 lG~~~v~~n~~p~~~w~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~lg~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 186 (367)
T 1tz9_A 107 CGISLVCYSFKPIFGWAKTDLAYENEDGSLSLLFDQAVVENMQPEDMYQLIHSQSKGFRLPGWEEERLQQFQELKAMYAG 186 (367)
T ss_dssp TTCCEEEECCCSSCSCCCSEEEEECTTSCEEEEEEHHHHHTSCHHHHHHHTTC---------CCHHHHHHHHHHHHHSTT
T ss_pred cCCCEEEEeCCCcCCccCccccccCCCcchhhhccHHHHhhcCHHHHHHHhcchhhcccCCCCccchHHHHHHHHhhccC
Confidence 4 7778884 3 22211000 00 100 0222
Q ss_pred HHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee-CCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCC
Q 006566 207 DEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT-NHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASN 285 (640)
Q Consensus 207 eeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv-NhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn 285 (640)
..+++..+++.+.+.++++.|+++|+ +|++ ||..-- ..+|. + .++.+.-+..+++++.|-.++-+-+=..+
T Consensus 187 ~~~~~~~~~~~~~l~~l~~~A~~~Gv--~l~lE~~~~~~----~~~g~-~-~~~~t~~~~~~l~~~v~~~~vgl~~D~~h 258 (367)
T 1tz9_A 187 VTEEDLVENLRYFLERVIPVCEEENI--KMGIHPDDPPW----EIFGL-P-RITKNLADLKRILSLVDSPANGITFCTGS 258 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTC--EEEECCCSSSS----CBTTB-C-CCTTSHHHHHHHHHHTCSTTEECCEETTH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCC--EEEEEECCCcc----cccCC-C-cccCCHHHHHHHHHhcCCCCEEEEEecCc
Confidence 23445578889999999999999997 5677 442110 11221 1 24566778889999999888888877766
Q ss_pred h
Q 006566 286 P 286 (640)
Q Consensus 286 ~ 286 (640)
.
T Consensus 259 ~ 259 (367)
T 1tz9_A 259 L 259 (367)
T ss_dssp H
T ss_pred h
Confidence 5
No 332
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=63.31 E-value=27 Score=35.68 Aligned_cols=107 Identities=8% Similarity=0.051 Sum_probs=67.4
Q ss_pred CCCCceEEEeccCCCCCCHHHHHHHHHHHHHc-CCCEEEEecCC-HHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHH
Q 006566 99 GSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQ-GADLVRITVQG-KREADACFEIKNSLVQKNYNIPLVADIHF-APSVA 175 (640)
Q Consensus 99 GG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~a-GceiVRvtvp~-~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~A 175 (640)
|.+-+++|= .|.. -+.+..++-+++|.+. +.++.=|-=|= .++-+.++.++++ +++||++|=.+ ++.-.
T Consensus 159 g~~~~L~vD--aN~~-~~~~~A~~~~~~l~~~~~~~i~~iEqP~~~~d~~~~~~l~~~-----~~ipIa~dEs~~~~~~~ 230 (332)
T 2ozt_A 159 PPGAKLRLD--ANGS-WDRATANRWFAWLDRHGNGKIEYVEQPLPPDQWQALLSLAQT-----VTTAIALDESVVSAAEV 230 (332)
T ss_dssp CTTCEEEEE--CTTC-CCHHHHHHHHHHHHHHCCTTEEEEECCSCTTCHHHHHHHHHH-----CSSCEEESTTCCSHHHH
T ss_pred CCCCEEEEc--ccCC-CCHHHHHHHHHHHHhhccCCcceeECCCCCCCHHHHHHHHHh-----CCCCEEeCCCCCCHHHH
Confidence 555555552 1211 2456666666666665 22333333331 2345666667664 78999999654 56655
Q ss_pred HHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHc--CCeEEEee
Q 006566 176 LRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY--GRAVRIGT 238 (640)
Q Consensus 176 l~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~--g~aIRIGv 238 (640)
..+++. ++-|.|.|+..|. +..+.+.|+++ |+++=+|.
T Consensus 231 ~~~~~~~a~~~i~ik~~~~GG-------------------------i~~i~~~A~~~~~gi~~~~~~ 272 (332)
T 2ozt_A 231 QRWVDRGWPGFFVIKTALFGD-------------------------PDSLSLLLRRGLEPQRLVFSS 272 (332)
T ss_dssp HHHHHTTCCSEEEECHHHHSC-------------------------HHHHHHHHHTTCCGGGEEEBC
T ss_pred HHHHHhCCCCEEEEChhhhCC-------------------------HHHHHHHHHHhCCCCcEEEeC
Confidence 555554 6777999988876 34578899999 99998874
No 333
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=63.25 E-value=11 Score=39.34 Aligned_cols=67 Identities=18% Similarity=0.218 Sum_probs=49.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEe---cCC---HHHHHHHHHHHHHhhcCCCCcceeeccC--C--CHHHHHHHhhhcCc
Q 006566 115 KDVAGTVEEVMRIADQGADLVRIT---VQG---KREADACFEIKNSLVQKNYNIPLVADIH--F--APSVALRVAECFDK 184 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvt---vp~---~~~A~~l~~I~~~L~~~g~~iPLVADIH--F--~~~~Al~Aa~~v~K 184 (640)
.|.+..++++.++.++|.+.|.+- +-+ ..+.+.++.|++.+ |.++||..|.| | ++.-|...++.+++
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a~---G~d~~l~vDan~~~~~~~~~a~~~~~~l~~ 220 (401)
T 2hzg_A 144 DTPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGL---GPDGDLMVDVGQIFGEDVEAAAARLPTLDA 220 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHHH---CSSSEEEEECTTTTTTCHHHHHTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCCCHHHHHHHHHHHHh
Confidence 478999999999999999999997 421 45667788888753 67899999998 4 44544444444443
No 334
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=62.89 E-value=24 Score=36.88 Aligned_cols=77 Identities=14% Similarity=0.183 Sum_probs=55.6
Q ss_pred EEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhh
Q 006566 105 RVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAE 180 (640)
Q Consensus 105 ~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~--~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~ 180 (640)
+|.+-.+..-.+.+..++++++..+.|...+.+-+-. .++.+.++.|++. -|.+++|..|.| |++.-|+..++
T Consensus 131 ~v~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~~~~~d~~~v~avR~a---~g~~~~L~vDaN~~w~~~~A~~~~~ 207 (379)
T 3r0u_A 131 SIVTDVSISCGNVAETIQNIQNGVEANFTAIKVKTGADFNRDIQLLKALDNE---FSKNIKFRFDANQGWNLAQTKQFIE 207 (379)
T ss_dssp EEEBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHH---CCTTSEEEEECTTCCCHHHHHHHHH
T ss_pred eEEEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecCCCHHHHHHHHHHHHHh---cCCCCeEEEeCCCCcCHHHHHHHHH
Confidence 3443333344578999999999999999999998743 4677788888874 356799999987 55555555555
Q ss_pred hcCc
Q 006566 181 CFDK 184 (640)
Q Consensus 181 ~v~K 184 (640)
.++.
T Consensus 208 ~l~~ 211 (379)
T 3r0u_A 208 EINK 211 (379)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 5554
No 335
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=62.16 E-value=12 Score=38.79 Aligned_cols=68 Identities=15% Similarity=0.215 Sum_probs=50.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccCC--CHHHHHHHhhhcCc
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDK 184 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIHF--~~~~Al~Aa~~v~K 184 (640)
..|.+..++++.+..+.|...+.+-+-. .++.+.++.|++.+ |-++||..|.|- ++.-|...++.+++
T Consensus 144 ~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~---g~~~~l~vDan~~~~~~~A~~~~~~l~~ 216 (377)
T 3my9_A 144 DPDFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEF---GERIDLRLDFNQALTPFGAMKILRDVDA 216 (377)
T ss_dssp CSSHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---GGGSEEEEECTTCCCTTTHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHh---CCCCeEEEeCCCCcCHHHHHHHHHHHhh
Confidence 3477889999999999999999998743 46788888888753 567999999874 44445554554444
No 336
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=61.80 E-value=12 Score=40.67 Aligned_cols=68 Identities=21% Similarity=0.259 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHcCCCEEEEe-----c--------CCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cC
Q 006566 119 GTVEEVMRIADQGADLVRIT-----V--------QGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FD 183 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvt-----v--------p~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~ 183 (640)
.+.+++++++++|+|.|.+. . .+.....++.++.+.+++ +++|+|||--. ++.=+.+|+.. ++
T Consensus 279 ~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~--~~iPVIa~GGI~~~~di~kal~~GAd 356 (490)
T 4avf_A 279 ATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEG--TGVPLIADGGIRFSGDLAKAMVAGAY 356 (490)
T ss_dssp CSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTT--TTCCEEEESCCCSHHHHHHHHHHTCS
T ss_pred CcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhcc--CCCcEEEeCCCCCHHHHHHHHHcCCC
Confidence 35678899999999999982 1 112366778888876543 57999998555 56666677776 77
Q ss_pred ceeeC
Q 006566 184 KIRVN 188 (640)
Q Consensus 184 KVRIN 188 (640)
.|=|-
T Consensus 357 ~V~vG 361 (490)
T 4avf_A 357 CVMMG 361 (490)
T ss_dssp EEEEC
T ss_pred eeeec
Confidence 77764
No 337
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=61.19 E-value=25 Score=36.89 Aligned_cols=85 Identities=12% Similarity=0.123 Sum_probs=57.6
Q ss_pred cCCCCceEEEeccCC-----CCCCHH----HHHHHHHHHHHcCCCEEEE-ecC-----CHHHHHHHHHHHHHhhcCCCCc
Q 006566 98 IGSEHPIRVQTMTTN-----DTKDVA----GTVEEVMRIADQGADLVRI-TVQ-----GKREADACFEIKNSLVQKNYNI 162 (640)
Q Consensus 98 IGG~~PI~VQSMt~t-----~T~Dv~----atv~Qi~rl~~aGceiVRv-tvp-----~~~~A~~l~~I~~~L~~~g~~i 162 (640)
+||..+=+|.+..+. .+.+.+ ...+++++..+.|...+.+ -+- -.++.+.++.||+. -|-++
T Consensus 130 LGG~~r~~v~~y~s~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a---~G~d~ 206 (394)
T 3mkc_A 130 LGGTNKDKVHPYLTLYPAIPVDASLDVAIKGYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGI---LGHDT 206 (394)
T ss_dssp TTCCSCSEECCEEECCCSCC-CCCHHHHHHHHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHH---HCSSS
T ss_pred cCCCcCCeeEEEEecCCcCCCCcchhhhHHHHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHH---hCCCC
Confidence 566543334333222 234545 5666999999999999999 553 24567778888875 36789
Q ss_pred ceeeccCC---CHHHHHHHhhhcCce
Q 006566 163 PLVADIHF---APSVALRVAECFDKI 185 (640)
Q Consensus 163 PLVADIHF---~~~~Al~Aa~~v~KV 185 (640)
||..|.|- ++.-|...++.+++.
T Consensus 207 ~l~vDaN~~~~~~~~A~~~~~~L~~~ 232 (394)
T 3mkc_A 207 DMMVDYLYRFTDWYEVARLLNSIEDL 232 (394)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHTGGG
T ss_pred eEEEeCCCCCCCHHHHHHHHHHhhhc
Confidence 99999984 667777777777664
No 338
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=60.82 E-value=80 Score=31.76 Aligned_cols=65 Identities=15% Similarity=0.249 Sum_probs=44.3
Q ss_pred HHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCC
Q 006566 122 EEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNF 192 (640)
Q Consensus 122 ~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~ 192 (640)
.|+....++|+|.|=+-+. +.++.+.+.+..+ + +.+.+++++| ++.-+..|.+. ++=|=|||-|.
T Consensus 126 ~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~---~--lGl~~lvev~-t~ee~~~A~~~Gad~IGv~~r~l 193 (272)
T 3qja_A 126 YQIHEARAHGADMLLLIVAALEQSVLVSMLDRTE---S--LGMTALVEVH-TEQEADRALKAGAKVIGVNARDL 193 (272)
T ss_dssp HHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHH---H--TTCEEEEEES-SHHHHHHHHHHTCSEEEEESBCT
T ss_pred HHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHH---H--CCCcEEEEcC-CHHHHHHHHHCCCCEEEECCCcc
Confidence 4788888999999988433 3444444333333 2 5677889998 55666677777 88888997554
No 339
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=60.52 E-value=79 Score=33.04 Aligned_cols=25 Identities=16% Similarity=-0.142 Sum_probs=14.2
Q ss_pred HHHHHHHHHHc-CCeEE-EeeCCCCCc
Q 006566 220 FSPLVEKCKKY-GRAVR-IGTNHGSLS 244 (640)
Q Consensus 220 f~~lV~~~Ke~-g~aIR-IGvNhGSLs 244 (640)
+.++++.+++. ++.++ |-+.-||-.
T Consensus 184 ~~~l~~~~~~~~~l~l~Gl~~H~gs~~ 210 (425)
T 2qgh_A 184 ALEMFLWAKKSAFLEPVSVHFHIGSQL 210 (425)
T ss_dssp HHHHHHHHHHCSSEEEEEEECCCBSSB
T ss_pred HHHHHHHHHhCCCccEEEEEEECCCCC
Confidence 45677778876 54432 333347753
No 340
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=60.42 E-value=19 Score=34.59 Aligned_cols=180 Identities=12% Similarity=0.109 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHHHHhhh-cCceeeCCCCCC
Q 006566 119 GTVEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNPGNFA 193 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvtvp~~---~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al~Aa~~-v~KVRINPGN~~ 193 (640)
..++.++++.++|++.+=+...+. ....++..|++ +++ .+++|+++.--++ |.-+..+++. +++|=|.-..+.
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~-i~~-~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEK-VAE-QIDIPFTVGGGIHDFETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHH-HHT-TCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHH-HHH-hCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 346667889999999987776542 22233333332 222 4789999864444 7778888887 888855333332
Q ss_pred chhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCC-eEEEeeCCCCCcH--hHHHHhCCChHHHHHHHHHHHHHHH
Q 006566 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR-AVRIGTNHGSLSD--RIMSYYGDSPRGMVESAFEFARICR 270 (640)
Q Consensus 194 d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~-aIRIGvNhGSLs~--ril~ryGdtp~gMVeSAle~~~i~e 270 (640)
+.. .+.+.++++|. .+.+|++..+.+. .+.- .|-. +..-.+..|+++.++
T Consensus 109 ~p~-------------------------~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~-~g~~-~~~~~~~~e~~~~~~ 161 (253)
T 1thf_D 109 NPS-------------------------LITQIAQTFGSQAVVVAIDAKRVDGEFMVFT-YSGK-KNTGILLRDWVVEVE 161 (253)
T ss_dssp CTH-------------------------HHHHHHHHHCGGGEEEEEEEEEETTEEEEEE-TTTT-EEEEEEHHHHHHHHH
T ss_pred ChH-------------------------HHHHHHHHcCCCcEEEEEEEEccCCcEEEEE-CCCc-cccCCCHHHHHHHHH
Confidence 211 13334444553 4566765421000 0000 1110 000013467778888
Q ss_pred HCCCCcEEEEEEeCChh-----hHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHHHHHHHhhhcCCcEEEe
Q 006566 271 KLDFHNFLFSMKASNPV-----VMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRV 344 (640)
Q Consensus 271 ~~~F~diviSmKsSn~~-----~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAiGIG~LL~DGIGDTIRV 344 (640)
+.|+.-|++.- .+.. .-.+.++.+.+. .+.|+-- +|=|.+.-.+-.++.-|. |.+-|
T Consensus 162 ~~G~~~i~~~~--~~~~g~~~g~~~~~~~~l~~~-----~~ipvia---------~GGI~~~~d~~~~~~~Ga-dgv~v 223 (253)
T 1thf_D 162 KRGAGEILLTS--IDRDGTKSGYDTEMIRFVRPL-----TTLPIIA---------SGGAGKMEHFLEAFLAGA-DAALA 223 (253)
T ss_dssp HTTCSEEEEEE--TTTTTSCSCCCHHHHHHHGGG-----CCSCEEE---------ESCCCSHHHHHHHHHTTC-SEEEE
T ss_pred HCCCCEEEEEe--ccCCCCCCCCCHHHHHHHHHh-----cCCCEEE---------ECCCCCHHHHHHHHHcCC-hHHHH
Confidence 89999888852 2211 124455555543 5677743 244555555555554443 45444
No 341
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=60.35 E-value=18 Score=36.29 Aligned_cols=148 Identities=14% Similarity=0.145 Sum_probs=80.9
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH-HHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHH
Q 006566 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR-EADACFEIKNSLVQKNYNIPLVADIH--FAPSVALR 177 (640)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~-~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~ 177 (640)
+.|+-+.=|++.+ +. -+..++++|||+|=|-.-..+ -.+.++.||+ .|...= || ++ ........
T Consensus 86 ~~~ldvHLmv~~p----~~---~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~----~G~k~G-va-lnp~Tp~e~l~~ 152 (246)
T 3inp_A 86 TAGMDVHLMVKPV----DA---LIESFAKAGATSIVFHPEASEHIDRSLQLIKS----FGIQAG-LA-LNPATGIDCLKY 152 (246)
T ss_dssp CSCEEEEEECSSC----HH---HHHHHHHHTCSEEEECGGGCSCHHHHHHHHHT----TTSEEE-EE-ECTTCCSGGGTT
T ss_pred CCeEEEEEeeCCH----HH---HHHHHHHcCCCEEEEccccchhHHHHHHHHHH----cCCeEE-EE-ecCCCCHHHHHH
Confidence 4688888886554 33 466788999999877543222 2345556654 466432 22 43 22333333
Q ss_pred HhhhcCce---eeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCC
Q 006566 178 VAECFDKI---RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS 254 (640)
Q Consensus 178 Aa~~v~KV---RINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdt 254 (640)
-++.+|-| -+||| ++. . +|... -++| ++.+-+.++++|..++|-|-.| ++..
T Consensus 153 ~l~~vD~VlvMsV~PG-fgG-Q-~fi~~---------~l~K----I~~lr~~~~~~~~~~~I~VDGG-I~~~-------- 207 (246)
T 3inp_A 153 VESNIDRVLIMSVNPG-FGG-Q-KFIPA---------MLDK----AKEISKWISSTDRDILLEIDGG-VNPY-------- 207 (246)
T ss_dssp TGGGCSEEEEECSCTT-C---C-CCCTT---------HHHH----HHHHHHHHHHHTSCCEEEEESS-CCTT--------
T ss_pred HHhcCCEEEEeeecCC-CCC-c-ccchH---------HHHH----HHHHHHHHHhcCCCeeEEEECC-cCHH--------
Confidence 33346666 57999 554 2 25421 1333 4445666667777777777333 3321
Q ss_pred hHHHHHHHHHHHHHHHHCCCCcEEEE---EEeCChhhHHHHHHHH
Q 006566 255 PRGMVESAFEFARICRKLDFHNFLFS---MKASNPVVMVQAYRLL 296 (640)
Q Consensus 255 p~gMVeSAle~~~i~e~~~F~diviS---mKsSn~~~mV~AyRlL 296 (640)
.++-|.+.|-+-+|+- .|+.|+...++..|..
T Consensus 208 ----------ti~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~ 242 (246)
T 3inp_A 208 ----------NIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDE 242 (246)
T ss_dssp ----------THHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred ----------HHHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHH
Confidence 3455566665544442 3666776666655543
No 342
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=60.08 E-value=15 Score=37.91 Aligned_cols=81 Identities=22% Similarity=0.229 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHH
Q 006566 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFS 221 (640)
Q Consensus 143 ~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~ 221 (640)
...+.|+.+.++|++.|+.+-|--| =++..-..|.+. ++.|=+--|.|++. |++++-++||++|.+
T Consensus 139 ~~~~~L~~~i~~L~~~GIrVSLFID--pd~~qI~aA~~~GAd~IELhTG~YA~a--------~~~~~~~~el~rl~~--- 205 (278)
T 3gk0_A 139 GHFDAVRAACKQLADAGVRVSLFID--PDEAQIRAAHETGAPVIELHTGRYADA--------HDAAEQQREFERIAT--- 205 (278)
T ss_dssp TTHHHHHHHHHHHHHTTCEEEEEEC--SCHHHHHHHHHHTCSEEEECCHHHHTC--------SSHHHHHHHHHHHHH---
T ss_pred ccHHHHHHHHHHHHHCCCEEEEEeC--CCHHHHHHHHHhCcCEEEEecchhhcc--------CCchhHHHHHHHHHH---
Confidence 3577899999999999999999988 345555566677 99999999999873 345566778877665
Q ss_pred HHHHHHHHcCCeEEEeeCCC
Q 006566 222 PLVEKCKKYGRAVRIGTNHG 241 (640)
Q Consensus 222 ~lV~~~Ke~g~aIRIGvNhG 241 (640)
-.+.|.++|. |||.|
T Consensus 206 -aA~~A~~lGL----~VnAG 220 (278)
T 3gk0_A 206 -GVDAGIALGL----KVNAG 220 (278)
T ss_dssp -HHHHHHHTTC----EEEEC
T ss_pred -HHHHHHHcCC----EEecC
Confidence 5678888885 56655
No 343
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=59.92 E-value=36 Score=33.10 Aligned_cols=138 Identities=15% Similarity=0.237 Sum_probs=80.3
Q ss_pred CCCCCHHHHHHHHHHHHHcC--CCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC--HH----HHHHHhhh-c
Q 006566 112 NDTKDVAGTVEEVMRIADQG--ADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PS----VALRVAEC-F 182 (640)
Q Consensus 112 t~T~Dv~atv~Qi~rl~~aG--ceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~--~~----~Al~Aa~~-v 182 (640)
-|..|.+.+++.+. ++| ++.+-+-++=. .+.-. .+.+.|++. ..+++.|.||- |+ .+..++++ +
T Consensus 10 lD~~~l~~~~~~~~---~~~~~v~~~Kv~~d~~-~~~G~-~~v~~l~~~--~~~v~lD~kl~Dip~t~~~~~~~~~~~Ga 82 (239)
T 1dbt_A 10 LDFASAEETLAFLA---PFQQEPLFVKVGMELF-YQEGP-SIVKQLKER--NCELFLDLKLHDIPTTVNKAMKRLASLGV 82 (239)
T ss_dssp CCCSSHHHHHHHTG---GGTTSCCEEEECHHHH-HHHTH-HHHHHHHHT--TCEEEEEEEECSCHHHHHHHHHHHHTTTC
T ss_pred eCCCCHHHHHHHHH---HhcccCcEEEECHHHH-HHhCH-HHHHHHHHC--CCcEEEEeccccchHHHHHHHHHHHhcCC
Confidence 45556665444443 445 36654443333 11111 233345544 46788999997 65 44466667 8
Q ss_pred CceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHc---CC--eEEEeeCCC-CCcHhHH-HHhCCCh
Q 006566 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY---GR--AVRIGTNHG-SLSDRIM-SYYGDSP 255 (640)
Q Consensus 183 ~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~---g~--aIRIGvNhG-SLs~ril-~ryGdtp 255 (640)
|-|=++|- +... -+.++++.+|++ |. |.=+||+-- |.+..-+ ..+|-.
T Consensus 83 d~vtvH~~--~g~~----------------------~l~~~~~~~~~~~~~g~~~~~~~~V~~~ts~~~~~l~~~~~~~- 137 (239)
T 1dbt_A 83 DLVNVHAA--GGKK----------------------MMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIE- 137 (239)
T ss_dssp SEEEEEGG--GCHH----------------------HHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBC-
T ss_pred CEEEEeCc--CCHH----------------------HHHHHHHHHHhhhccCCCCccEEEEEEcCCCCHHHHHHHhccC-
Confidence 88888772 2211 256788888888 76 545687765 6665556 655411
Q ss_pred HHHHHHHHHHHHHHHHCCCCcEEEEE
Q 006566 256 RGMVESAFEFARICRKLDFHNFLFSM 281 (640)
Q Consensus 256 ~gMVeSAle~~~i~e~~~F~diviSm 281 (640)
...++..+...+...+.|+.-+|.|.
T Consensus 138 ~~~~d~Vl~ma~~~~~~G~~g~v~~~ 163 (239)
T 1dbt_A 138 KSLIDTVVHYSKQAEESGLDGVVCSV 163 (239)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEECCG
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEECH
Confidence 02455556666777889998877664
No 344
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=59.59 E-value=1.8e+02 Score=30.76 Aligned_cols=232 Identities=14% Similarity=0.120 Sum_probs=126.0
Q ss_pred eEEEceeecCCCCceEEEeccCCCCCC---HHHHHHHHHHHHHcCCCEE-----EEec-----------CCHHHHHHHHH
Q 006566 90 TVMVGNVAIGSEHPIRVQTMTTNDTKD---VAGTVEEVMRIADQGADLV-----RITV-----------QGKREADACFE 150 (640)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T~D---v~atv~Qi~rl~~aGceiV-----Rvtv-----------p~~~~A~~l~~ 150 (640)
.++||++.+ .|.|..-.||.....| ++..++--.+.+. |+-+| -+.- -+.+..+.+++
T Consensus 21 P~~ig~~~L--~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~-G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~ 97 (402)
T 2hsa_B 21 PYKMGKFNL--SHRVVLAPMTRCRALNNIPQAALGEYYEQRAT-AGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKK 97 (402)
T ss_dssp CEEETTEEE--SCSEEECCCCCCCSGGGCCCHHHHHHHHHHCC-TTCEEECCCEESSTTCCCSTTCCBCSSHHHHHHHHH
T ss_pred CeeECCEEe--cCCeEECCCCCCcCCCCCCCHHHHHHHHHHhc-cCCEEEecceeeccccccCCCCcccCCHHHHHHHHH
Confidence 478888888 7899999998765322 3444554555554 34444 2221 13455678888
Q ss_pred HHHHhhcCCCC--c------------------ceee------c-------------cCCCH----------------HHH
Q 006566 151 IKNSLVQKNYN--I------------------PLVA------D-------------IHFAP----------------SVA 175 (640)
Q Consensus 151 I~~~L~~~g~~--i------------------PLVA------D-------------IHF~~----------------~~A 175 (640)
+.+...+.|.. + |.|| + -+-.| ++|
T Consensus 98 l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii~~f~~AA 177 (402)
T 2hsa_B 98 IVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSA 177 (402)
T ss_dssp HHHHHHHTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEeccCCcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHH
Confidence 87777776643 1 1111 0 01234 566
Q ss_pred HHHhhh-cCceeeCCCC------CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHH
Q 006566 176 LRVAEC-FDKIRVNPGN------FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIM 248 (640)
Q Consensus 176 l~Aa~~-v~KVRINPGN------~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril 248 (640)
..|.++ +|-|-||-|| |-++.-+-...+|-- ..+.....+.|.++.+.+.+.+.-+.+||..+.. ... +
T Consensus 178 ~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGG-slenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~-~~g-~- 253 (402)
T 2hsa_B 178 LNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGG-SLANRCKFITQVVQAVVSAIGADRVGVRVSPAID-HLD-A- 253 (402)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCC-STT-C-
T ss_pred HHHHHcCCCEEEECCccchHHHhccCCccCccCCccCc-ChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccc-cCC-C-
Confidence 677777 9999999987 001110001123321 1344455566666666666643357788876421 100 0
Q ss_pred HHhCCChHHHHHHHHHHHHHHHHCC------CCcEEEEEEeCCh----hh-H---HHHHHHHHHHHHHcCCCcceEEEee
Q 006566 249 SYYGDSPRGMVESAFEFARICRKLD------FHNFLFSMKASNP----VV-M---VQAYRLLVAEMYVHGWDYPLHLGVT 314 (640)
Q Consensus 249 ~ryGdtp~gMVeSAle~~~i~e~~~------F~diviSmKsSn~----~~-m---V~AyRlL~~~m~~~g~dyPLHLGVT 314 (640)
.-|++ .+.+.++++.+++.| .+-+.+|--.-+. .. + -...-.+++++.+ -++-|+-..
T Consensus 254 -~~~~~----~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~-~~~iPvi~~-- 325 (402)
T 2hsa_B 254 -MDSNP----LSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRN-AYQGTFICS-- 325 (402)
T ss_dssp -CCSCH----HHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHH-HCSSCEEEE--
T ss_pred -CCCCC----HHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHH-HCCCCEEEe--
Confidence 00122 456889999999999 8777776432110 10 0 0011122333322 256676432
Q ss_pred cCCCCCcceeehHHHHHHHhhhcCCcEEEe
Q 006566 315 EAGEGEDGRMKSAIGIGTLLQDGLGDTIRV 344 (640)
Q Consensus 315 EAG~gedGrIKSAiGIG~LL~DGIGDTIRV 344 (640)
|.| +.-..-.+|.+|--|-|-+
T Consensus 326 -------G~i-~~~~a~~~l~~g~aD~V~i 347 (402)
T 2hsa_B 326 -------GGY-TRELGIEAVAQGDADLVSY 347 (402)
T ss_dssp -------SSC-CHHHHHHHHHTTSCSEEEE
T ss_pred -------CCC-CHHHHHHHHHCCCCceeee
Confidence 446 6666677788887777654
No 345
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=59.02 E-value=16 Score=38.17 Aligned_cols=57 Identities=11% Similarity=0.080 Sum_probs=44.5
Q ss_pred CCCcceeeccCC-CHHHHHHHhhh--cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEE
Q 006566 159 NYNIPLVADIHF-APSVALRVAEC--FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (640)
Q Consensus 159 g~~iPLVADIHF-~~~~Al~Aa~~--v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIR 235 (640)
.+++||++|=.+ ++.-+..+++. ++-|.|.|...|.-.. ...+++.|+++|+++=
T Consensus 250 ~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~----------------------~~~ia~~A~~~gi~~~ 307 (393)
T 1wuf_A 250 QLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSS----------------------ALKIAEYCALNEILVW 307 (393)
T ss_dssp TCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHH----------------------HHHHHHHHHHTTCEEE
T ss_pred hCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHHH----------------------HHHHHHHHHHcCCeEE
Confidence 478999999654 56666666644 8999999999987442 6789999999999984
Q ss_pred Ee
Q 006566 236 IG 237 (640)
Q Consensus 236 IG 237 (640)
+|
T Consensus 308 ~~ 309 (393)
T 1wuf_A 308 CG 309 (393)
T ss_dssp EC
T ss_pred ec
Confidence 44
No 346
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=58.87 E-value=39 Score=34.86 Aligned_cols=69 Identities=16% Similarity=0.193 Sum_probs=51.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceeeccCC--CHHHHHHHhhhcCce
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDKI 185 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVADIHF--~~~~Al~Aa~~v~KV 185 (640)
+.|.+..++++.++.+.|..-+.+-+- -.++.+.++.|++.+ |.+++|..|-|- ++.-|+..++.+++.
T Consensus 142 ~~~~~~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~avr~a~---g~~~~l~vDaN~~~~~~~a~~~~~~l~~~ 214 (372)
T 3cyj_A 142 SYPLRRLQEQLGGWAAAGIPRVKMKVGREPEKDPERVRAAREAI---GESVELMVDANGAYTRKQALYWAGAFARE 214 (372)
T ss_dssp TSCHHHHHHHHHHHHHTTCCEEEEECCSSGGGHHHHHHHHHHHH---CTTSEEEEECTTCSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHHHh---CCCCeEEEECCCCCCHHHHHHHHHHHHhh
Confidence 346788999999999999999999773 245678888888864 668999999874 455555555555553
No 347
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=58.85 E-value=18 Score=34.64 Aligned_cols=90 Identities=17% Similarity=0.098 Sum_probs=58.6
Q ss_pred HHHHHHHHHHcCCCEEEEecCCH------HHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHHHHhhh-cCceeeCCCC
Q 006566 120 TVEEVMRIADQGADLVRITVQGK------READACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNPGN 191 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~------~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al~Aa~~-v~KVRINPGN 191 (640)
+++.++++.++|++.|=+|.-+. -+-+.+++|++. +++|+||+--.+ +.-+.++.+. ++.|=+-=+=
T Consensus 153 ~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~-----~~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal 227 (253)
T 1thf_D 153 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-----TTLPIIASGGAGKMEHFLEAFLAGADAALAASVF 227 (253)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGG-----CCSCEEEESCCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHh-----cCCCEEEECCCCCHHHHHHHHHcCChHHHHHHHH
Confidence 46777888899999888774221 134566666653 689999987666 5666666666 6666442221
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEE
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRI 236 (640)
+..+. .+.+.++.+++.|+++|.
T Consensus 228 ~~~~~----------------------~~~~~~~~l~~~g~~~~~ 250 (253)
T 1thf_D 228 HFREI----------------------DVRELKEYLKKHGVNVRL 250 (253)
T ss_dssp HTTCS----------------------CHHHHHHHHHHTTCCCCC
T ss_pred HcCCC----------------------CHHHHHHHHHHcCCcccc
Confidence 21110 166677888999999985
No 348
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=58.63 E-value=42 Score=34.05 Aligned_cols=90 Identities=13% Similarity=0.150 Sum_probs=64.5
Q ss_pred HHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHHhhcCCCCcceee-ccCCCHHHHHHHhhh-cCceeeCCCCCCch
Q 006566 121 VEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNYNIPLVA-DIHFAPSVALRVAEC-FDKIRVNPGNFADR 195 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~~---~~A~~l~~I~~~L~~~g~~iPLVA-DIHF~~~~Al~Aa~~-v~KVRINPGN~~d~ 195 (640)
+++.+..+++|+.-++|-+-.. -..+.|..|++. +++|++. |.=.+|.-..+|..+ +|.|=++---+.+
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~-----v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~- 155 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQA-----CSLPALRKDFLFDPYQVYEARSWGADCILIIMASVDD- 155 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHT-----SSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCH-
T ss_pred HHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHh-----cCCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCH-
Confidence 6778889999999999865322 266788889874 8899864 544666666677777 9998877665532
Q ss_pred hhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 196 RAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 196 ~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
. .+..+++.|+++|.-.=+=|
T Consensus 156 ~----------------------~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 156 D----------------------LAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp H----------------------HHHHHHHHHHHTTCEEEEEE
T ss_pred H----------------------HHHHHHHHHHHcCCeEEEEe
Confidence 1 37788889999887543444
No 349
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=58.45 E-value=48 Score=31.80 Aligned_cols=109 Identities=16% Similarity=0.139 Sum_probs=59.9
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCE--EEEe----cCCHH-HHHHHHHHHHHhhcCCCCcceeeccCC-CH
Q 006566 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADL--VRIT----VQGKR-EADACFEIKNSLVQKNYNIPLVADIHF-AP 172 (640)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGcei--VRvt----vp~~~-~A~~l~~I~~~L~~~g~~iPLVADIHF-~~ 172 (640)
.+|+-+=|++..|..+ ..++++++.++|+++ +|+. +|... ..+.++.|++. ++.|+.++.=- ||
T Consensus 5 ~~~~i~psi~a~d~~~---l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~-----~~~~~~v~lmv~d~ 76 (228)
T 1h1y_A 5 AAAKIAPSMLSSDFAN---LAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKH-----TKAYLDCHLMVTNP 76 (228)
T ss_dssp -CCEEEEBGGGSCGGG---HHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTT-----CCSEEEEEEESSCG
T ss_pred cCCeEEEEeeeCCHHH---HHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhh-----cCCcEEEEEEecCH
Confidence 4677788998888444 456778889999999 5652 34421 12444445542 23444333211 22
Q ss_pred -HHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhH-HHHHHHHHHcCCeEEEeeCCCC
Q 006566 173 -SVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVF-SPLVEKCKKYGRAVRIGTNHGS 242 (640)
Q Consensus 173 -~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f-~~lV~~~Ke~g~aIRIGvNhGS 242 (640)
+....++++ ++-|=+-.+-. + .. .++++.+|++|..+=+-+|..+
T Consensus 77 ~~~i~~~~~agad~v~vH~~~~-~------------------------~~~~~~~~~i~~~g~~igv~~~p~t 124 (228)
T 1h1y_A 77 SDYVEPLAKAGASGFTFHIEVS-R------------------------DNWQELIQSIKAKGMRPGVSLRPGT 124 (228)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGC-T------------------------TTHHHHHHHHHHTTCEEEEEECTTS
T ss_pred HHHHHHHHHcCCCEEEECCCCc-c------------------------cHHHHHHHHHHHcCCCEEEEEeCCC
Confidence 234455555 66554332211 0 13 5678888998866544554443
No 350
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=58.31 E-value=24 Score=37.04 Aligned_cols=64 Identities=13% Similarity=0.198 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHcCCCEEEE-ecC----C-HHHHHHHHHHHHHhhcCCCCcceeeccC--C-CHHHHHHHhhhcCce
Q 006566 119 GTVEEVMRIADQGADLVRI-TVQ----G-KREADACFEIKNSLVQKNYNIPLVADIH--F-APSVALRVAECFDKI 185 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRv-tvp----~-~~~A~~l~~I~~~L~~~g~~iPLVADIH--F-~~~~Al~Aa~~v~KV 185 (640)
...+++++..+.|...+.+ -+- + .++.+.++.||+. -|-++||..|.| | ++.-|...++.+++.
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a---~G~d~~l~vDan~~~~~~~~A~~~~~~L~~~ 227 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREV---IGWDMDMMVDCLYRWTDWQKARWTFRQLEDI 227 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHH---HCSSSEEEEECTTCCSCHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHH---hCCCCeEEEECCCCCCCHHHHHHHHHHHhhc
Confidence 5667999999999999999 554 2 3567778888875 367899999998 4 566677777777664
No 351
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=58.25 E-value=27 Score=36.12 Aligned_cols=68 Identities=10% Similarity=0.131 Sum_probs=49.6
Q ss_pred CCCHHHHHHHHHHHHH-cCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCc
Q 006566 114 TKDVAGTVEEVMRIAD-QGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDK 184 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~-aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~K 184 (640)
..|.+..++++.+..+ .|...+.+-+-. .++.+.++.|++. -|-++||..|.| |++.-|+..++.+++
T Consensus 140 ~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~~---~g~~~~l~vDan~~~~~~~a~~~~~~l~~ 213 (370)
T 1chr_A 140 SGDTKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNS---LGSKAYLRVDVNQAWDEQVASVYIPELEA 213 (370)
T ss_dssp SSSHHHHHHHHHHHHHTTCCCEEEEECSSSCSHHHHHHHHHHHHH---SSTTCCEEEECTTCCCTTHHHHHTHHHHT
T ss_pred CCCcHHHHHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHh---cCCCCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 3467788888888777 899999988743 5778888888875 356799999987 455555555555544
No 352
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=58.08 E-value=35 Score=35.31 Aligned_cols=74 Identities=16% Similarity=0.204 Sum_probs=54.8
Q ss_pred EEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHh
Q 006566 105 RVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVA 179 (640)
Q Consensus 105 ~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~---~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa 179 (640)
+|.+-.+....+.+..++++.++.+.|...+.+-+-.. ++.+.++.|++.+ -+++|..|-| |++.-|+..+
T Consensus 132 ~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~----~~~~l~vDaN~~~~~~~A~~~~ 207 (365)
T 3ik4_A 132 QLETDMTITAGDEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAA----PTAPLIVDGNCGYDVERALAFC 207 (365)
T ss_dssp EEEBCEEECCSCHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHS----SSCCEEEECTTCCCHHHHHHHH
T ss_pred ceeeeEEecCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhC----CCCeEEEECCCCCCHHHHHHHH
Confidence 34433333446889999999999999999999987654 7888888888874 2479999987 5566665555
Q ss_pred hhc
Q 006566 180 ECF 182 (640)
Q Consensus 180 ~~v 182 (640)
+.+
T Consensus 208 ~~L 210 (365)
T 3ik4_A 208 AAC 210 (365)
T ss_dssp HHH
T ss_pred HHH
Confidence 555
No 353
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=57.96 E-value=23 Score=36.35 Aligned_cols=67 Identities=9% Similarity=0.184 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.|.+..++++.++.++|.+-|.+-+--..+.+.++.|++.+ |.++||..|.| |++.- ...++.+++.
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~e~v~avr~~~---g~~~~l~vDan~~~~~~~-~~~~~~l~~~ 208 (368)
T 1sjd_A 140 DTIPQLLDVVGGYLDEGYVRIKLKIEPGWDVEPVRAVRERF---GDDVLLQVDANTAYTLGD-APQLARLDPF 208 (368)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECBTTBSHHHHHHHHHHH---CTTSEEEEECTTCCCGGG-HHHHHTTGGG
T ss_pred CCHHHHHHHHHHHHHhCccEEEEecCchhHHHHHHHHHHhc---CCCceEEEeccCCCCHHH-HHHHHHHHhc
Confidence 37888999999999999999999774355778888888853 66799999987 44443 4444445543
No 354
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=57.77 E-value=25 Score=37.03 Aligned_cols=69 Identities=25% Similarity=0.337 Sum_probs=51.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCC---------------HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHH
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQG---------------KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVAL 176 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~---------------~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al 176 (640)
-.+.+..++++++..+.|...+.+-+-+ .++.+.++.||+. -|-++||..|.| |++.-|+
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a---~G~d~~l~vDan~~~~~~~A~ 225 (404)
T 4e5t_A 149 YNDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAA---VGTKADLLFGTHGQFTVSGAK 225 (404)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHH---HGGGSEEEECCCSCBCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHH---cCCCCeEEEeCCCCcCHHHHH
Confidence 3578999999999999999999997532 2456677777764 356799999988 5566666
Q ss_pred HHhhhcCce
Q 006566 177 RVAECFDKI 185 (640)
Q Consensus 177 ~Aa~~v~KV 185 (640)
..++.+++.
T Consensus 226 ~~~~~l~~~ 234 (404)
T 4e5t_A 226 RLARRLEAY 234 (404)
T ss_dssp HHHHHHGGG
T ss_pred HHHHHHhhc
Confidence 666666654
No 355
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=57.72 E-value=32 Score=36.16 Aligned_cols=209 Identities=17% Similarity=0.191 Sum_probs=120.9
Q ss_pred eEEEceeecCCCCceEEEeccCCCCCC---HHHHHHHHHHHHHcCCCEE-----EEec-----------CCHHHHHHHHH
Q 006566 90 TVMVGNVAIGSEHPIRVQTMTTNDTKD---VAGTVEEVMRIADQGADLV-----RITV-----------QGKREADACFE 150 (640)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T~D---v~atv~Qi~rl~~aGceiV-----Rvtv-----------p~~~~A~~l~~ 150 (640)
.++||++.+ .|.|..-.||.....| ++..++--.+.++ |+-+| -+.- -+.+..+.++.
T Consensus 19 P~~ig~~~l--~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~-g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~ 95 (376)
T 1icp_A 19 PCKMGKFEL--CHRVVLAPLTRQRSYGYIPQPHAILHYSQRST-NGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKP 95 (376)
T ss_dssp CEEETTEEE--SCSEEECCCCCCCCGGGSCCHHHHHHHHHTCC-TTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHH
T ss_pred CeeECCEEE--CCccEECCcCcCcCCCCCCCHHHHHHHHHhcC-CeeEEEECceeeccccccCcccCccCCHHHHHHHHH
Confidence 478888888 7899999998765433 3333333344443 55554 2211 13455678888
Q ss_pred HHHHhhcCCCCcceeeccCCCHHHHHHHhh-----h--cCceeeCCCCCCchh---hhc-cccccchHHHHHHHhhhHhh
Q 006566 151 IKNSLVQKNYNIPLVADIHFAPSVALRVAE-----C--FDKIRVNPGNFADRR---AQF-EQLEYTDDEYQKELQHIEEV 219 (640)
Q Consensus 151 I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~-----~--v~KVRINPGN~~d~~---k~F-~~~eYtdeeY~~Ele~I~~~ 219 (640)
+.+...+.|. ++++=|+-.-+.+..... . -..|.. ||++.... ..| ...+.|.+ |++.+.+.
T Consensus 96 l~~avh~~G~--~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~-~~~~~~~~~~~~~~~~p~~mt~~----eI~~~i~~ 168 (376)
T 1icp_A 96 IVDAVHAKGG--IFFCQIWHVGRVSNKDFQPNGEDPISCTDRGL-TPQIMSNGIDIAHFTRPRRLTTD----EIPQIVNE 168 (376)
T ss_dssp HHHHHHHTTC--EEEEEEECCTTSSCTTTSGGGCCCEESSSCCC-CCEECTTSSCEECCCCCEECCTT----THHHHHHH
T ss_pred HHHHHHhcCC--eEEEEeecCCCCcCcccccCCCceecCCCCCC-ccccccccccccCCCCCCcCCHH----HHHHHHHH
Confidence 8887777775 555544332221110000 0 111111 11110000 001 12345554 56667778
Q ss_pred HHHHHHHHHHcCC-eEEEeeCCCCCcHhHH--------HHhCCChHHHHHHHHHHHHHHHH-CCCCcEEEEEEeCC----
Q 006566 220 FSPLVEKCKKYGR-AVRIGTNHGSLSDRIM--------SYYGDSPRGMVESAFEFARICRK-LDFHNFLFSMKASN---- 285 (640)
Q Consensus 220 f~~lV~~~Ke~g~-aIRIGvNhGSLs~ril--------~ryGdtp~gMVeSAle~~~i~e~-~~F~diviSmKsSn---- 285 (640)
|..-.+.|++.|- .|-|=.-||-|=+.++ .+||.+.+.=..-++|-++-+++ .|= + .|++|-|-
T Consensus 169 f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~-~-~V~vrls~~~~~ 246 (376)
T 1icp_A 169 FRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGS-D-RVGIRISPFAHY 246 (376)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCG-G-GEEEEECTTCCT
T ss_pred HHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcC-C-ceEEEecccccc
Confidence 8888889999885 7888777888766666 46886665555566666664433 442 3 46677762
Q ss_pred ----hhhHHHHHHHHHHHHHHcCCCcceEE
Q 006566 286 ----PVVMVQAYRLLVAEMYVHGWDYPLHL 311 (640)
Q Consensus 286 ----~~~mV~AyRlL~~~m~~~g~dyPLHL 311 (640)
-....+.+..|++++++.|.+| ||+
T Consensus 247 ~g~~~~~~~~~~~~la~~le~~Gvd~-i~v 275 (376)
T 1icp_A 247 NEAGDTNPTALGLYMVESLNKYDLAY-CHV 275 (376)
T ss_dssp TTCCCSCHHHHHHHHHHHHGGGCCSE-EEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCE-EEE
Confidence 1235667888999999999986 555
No 356
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=57.05 E-value=19 Score=37.85 Aligned_cols=86 Identities=13% Similarity=0.155 Sum_probs=55.8
Q ss_pred HHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCCCchhhhcc
Q 006566 124 VMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNFADRRAQFE 200 (640)
Q Consensus 124 i~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~--~v~KVRINPGN~~d~~k~F~ 200 (640)
+++|.+.|-+.+===++ .++-+.+..++++ +++|+.+|=.+ ++.-...+++ .++-|.|.|...|.-..
T Consensus 209 ~~~l~~~~i~~iEeP~~-~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~--- 279 (388)
T 3qld_A 209 LRQLDAYDLQFIEQPLP-EDDWFDLAKLQAS-----LRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGA--- 279 (388)
T ss_dssp HHHGGGGCCSCEECCSC-TTCHHHHHHHHHH-----CSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHH---
T ss_pred HHHHhhCCCcEEECCCC-cccHHHHHHHHHh-----CCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHH---
Confidence 45555544433321121 1234556666664 78999999554 4554555554 48999999999987442
Q ss_pred ccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe
Q 006566 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG 237 (640)
Q Consensus 201 ~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG 237 (640)
...+...|+++|+++=+|
T Consensus 280 -------------------~~~ia~~A~~~gi~~~~~ 297 (388)
T 3qld_A 280 -------------------TLRALDVAGEAGMAAWVG 297 (388)
T ss_dssp -------------------HHHHHHHHHHTTCEEEEC
T ss_pred -------------------HHHHHHHHHHCCCeEEec
Confidence 678999999999998544
No 357
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=57.03 E-value=12 Score=37.87 Aligned_cols=81 Identities=23% Similarity=0.263 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHH
Q 006566 143 READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFS 221 (640)
Q Consensus 143 ~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~ 221 (640)
...+.|+.+.++|++.|+.+-|--| =++.--..|.+. ++-|=+--|.|++. |++.+-++||++|.+
T Consensus 111 ~~~~~l~~~i~~L~~~GIrVSLFID--pd~~qi~aA~~~GA~~IELhTG~Ya~a--------~~~~~~~~el~~i~~--- 177 (243)
T 1m5w_A 111 GQRDKMRDACKRLADAGIQVSLFID--ADEEQIKAAAEVGAPFIEIHTGCYADA--------KTDAEQAQELARIAK--- 177 (243)
T ss_dssp GGHHHHHHHHHHHHHTTCEEEEEEC--SCHHHHHHHHHTTCSEEEEECHHHHHC--------CSHHHHHHHHHHHHH---
T ss_pred hhHHHHHHHHHHHHHCCCEEEEEeC--CCHHHHHHHHHhCcCEEEEechhhhcC--------CCchhHHHHHHHHHH---
Confidence 4677888888999999999999888 456666667777 99999999999984 334455678777665
Q ss_pred HHHHHHHHcCCeEEEeeCCC
Q 006566 222 PLVEKCKKYGRAVRIGTNHG 241 (640)
Q Consensus 222 ~lV~~~Ke~g~aIRIGvNhG 241 (640)
-.+.|+++|. |||.|
T Consensus 178 -aa~~A~~lGL----~VnAG 192 (243)
T 1m5w_A 178 -AATFAASLGL----KVNAG 192 (243)
T ss_dssp -HHHHHHHTTC----EEEEE
T ss_pred -HHHHHHHcCC----EEecC
Confidence 5688889885 55655
No 358
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=56.79 E-value=27 Score=37.02 Aligned_cols=68 Identities=13% Similarity=0.263 Sum_probs=50.2
Q ss_pred CCH-HHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 115 KDV-AGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 115 ~Dv-~atv~Qi~rl~~aGceiVRvtvp~--~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.+. +..++++.++.++|.+-|.+-+-. ..+.+.++.|++.+ |.++||..|.| |++.-|...++.+++.
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v~avR~av---G~d~~l~vDan~~~~~~eai~~~~~L~~~ 255 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGDAARVDIERVRHVRKVL---GDEVDILTDANTAYTMADARRVLPVLAEI 255 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHHHHHHHHH---CTTSEEEEECTTCCCHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHhc---CCCCEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 345 888999999999999999997652 34567777777753 66899999987 5566665555555553
No 359
>3llx_A Predicted amino acid aldolase or racemase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: LLP TRS; 1.50A {Idiomarina loihiensis}
Probab=56.60 E-value=13 Score=38.37 Aligned_cols=151 Identities=22% Similarity=0.219 Sum_probs=76.2
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcC-ceeeCCCCCCchhhh
Q 006566 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFD-KIRVNPGNFADRRAQ 198 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~-KVRINPGN~~d~~k~ 198 (640)
+++=++.+.++|++ .++|.+..||+.+. +.|++-|+++ .++.+.-...+++..+ +.+|-+ ..|...
T Consensus 51 ~~~va~~l~~~G~~--~~~va~~~Ea~~l~-------~~Gi~~~il~-~~~~~~~~~~~~~l~~~~~~l~~--~Vds~~- 117 (376)
T 3llx_A 51 TLEAAGYLLDSKSA--PATVSTLAEAEAYA-------KAGYTDLLYA-VGIAPAKLKRVAALRQQGINLHI--LLDNIT- 117 (376)
T ss_dssp BHHHHHHHCSSTTS--CEEESSHHHHHHHH-------HTTCCEEEEE-EECCGGGHHHHHHHHHTTCEEEE--EECSHH-
T ss_pred CHHHHHHHHhcCCC--cEEEecHHHHHHHH-------hCCCCcEEEe-CCCCHHHHHHHHHhhccCCeEEE--EECCHH-
Confidence 33444567788987 46888999998653 3478878887 3444543333433221 122211 012111
Q ss_pred ccccccchHHHHHHHhhhHhhHHHHHHHHHHcCC--eEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCc
Q 006566 199 FEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHN 276 (640)
Q Consensus 199 F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~--aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~d 276 (640)
.+..+-+.|++.|. .+-|=+|.| |+|.|-.|+.- .+.+.++.+ +++=
T Consensus 118 --------------------~l~~l~~~a~~~~~~~~V~l~vdtG------~~R~G~~~~~~--~l~~~~~~l---~l~l 166 (376)
T 3llx_A 118 --------------------QAQAVVDYAAEFGQDFSVFIEIDSD------DHRGGIKPSDS--KLLTIAKTL---GEHF 166 (376)
T ss_dssp --------------------HHHHHHHHHHHHTCCCEEEEEBCSS------SSSSCBCTTCT--HHHHHHHHH---GGGE
T ss_pred --------------------HHHHHHHHHHhcCCceEEEEEECCC------CCCCCCCCchH--HHHHHHHHh---CCEE
Confidence 14445556666654 444566777 46889655421 122333333 2211
Q ss_pred E-EEEEEe----CC-h-------hhHHHHHHHHHHHHHHcCCCcc-eEEEee
Q 006566 277 F-LFSMKA----SN-P-------VVMVQAYRLLVAEMYVHGWDYP-LHLGVT 314 (640)
Q Consensus 277 i-viSmKs----Sn-~-------~~mV~AyRlL~~~m~~~g~dyP-LHLGVT 314 (640)
. +.+.=+ .+ + ....+.++.+++.+.+.|.+.| +|+|=|
T Consensus 167 ~Gl~th~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~l~~~g~~~~~vs~g~S 218 (376)
T 3llx_A 167 TGLMTHAGGSYACNTEQGLKNFAKQECDAVRIARNNLETAGIHCAITSVGST 218 (376)
T ss_dssp EEEECCCGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEECCH
T ss_pred eEEEEecccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCC
Confidence 1 111111 11 1 1223444556677777887765 587754
No 360
>2p3e_A Diaminopimelate decarboxylase; southeast collaboratory for struct genomics, riken spring-8 center; 1.99A {Aquifex aeolicus}
Probab=56.52 E-value=31 Score=35.83 Aligned_cols=48 Identities=10% Similarity=-0.047 Sum_probs=29.0
Q ss_pred HHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcc-eeeccC-CCHHHHHHHhh
Q 006566 123 EVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIP-LVADIH-FAPSVALRVAE 180 (640)
Q Consensus 123 Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iP-LVADIH-F~~~~Al~Aa~ 180 (640)
=++.|.++|| .+.|-+..||..+.+ .|++-| ++---+ +.+.-...|++
T Consensus 72 v~~~l~~~G~---~~~vas~~E~~~~~~-------~G~~~~~Il~~g~~~~~~~l~~a~~ 121 (420)
T 2p3e_A 72 LVKLLGELGA---GADIVSGGELYLAKK-------AGIPPERIVYAGVGKTEKELTDAVD 121 (420)
T ss_dssp HHHHHHHTTC---EEEESSHHHHHHHHH-------TTCCGGGEEECSSCCCHHHHHHHHH
T ss_pred HHHHHHHcCC---eEEEeCHHHHHHHHH-------cCCChhHEEEeCCCCCHHHHHHHHH
Confidence 3356788997 699999999986643 366543 333222 33444444444
No 361
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=56.22 E-value=2e+02 Score=30.84 Aligned_cols=51 Identities=18% Similarity=0.272 Sum_probs=37.4
Q ss_pred HHHHHHHHHHcCCCEEEEecC-------------CHHHHHHHHHHHHHhhcCCCCcceeeccCCCH
Q 006566 120 TVEEVMRIADQGADLVRITVQ-------------GKREADACFEIKNSLVQKNYNIPLVADIHFAP 172 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp-------------~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~ 172 (640)
+-+.+..|+++|...|||.+. +.+--+.+.++.+.+++.|+ =+|-|+|-.+
T Consensus 47 t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi--~vildlH~~~ 110 (515)
T 3icg_A 47 THAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDM--YVIINLHHEN 110 (515)
T ss_dssp CHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTC--EEEEECCSCT
T ss_pred CHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCC--EEEEecCCCC
Confidence 345566678899999999643 33445788888888888775 4567999765
No 362
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=55.93 E-value=1.8 Score=43.42 Aligned_cols=62 Identities=18% Similarity=0.212 Sum_probs=44.7
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceeeC
Q 006566 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRVN 188 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRIN 188 (640)
.+++..+.++|+|.|=.+ .. .++..+.+.+++.+..+|+++|+| +|.-+..+++. ++-|-++
T Consensus 90 ~~~~~~~~~aGad~v~~~-~~----~~~~~~~~~~~~~~~~i~l~~~v~-~~~~~~~a~~~Gad~I~v~ 152 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDES-EV----LTPADEEHHIDKWKFKVPFVCGAR-NLGEALRRIAEGAAMIRTK 152 (297)
T ss_dssp HHHHHHHHHTTCSEEEEE-TT----SCCSCSSCCCCGGGCSSCEEEEES-SHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEeee-CC----CChHHHHHHHHHhCCCceEEeecC-CHHHHHHHHHcCCCEEEEc
Confidence 688899999999999322 21 122334444555456899999988 78788888888 8888887
No 363
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=55.53 E-value=41 Score=33.45 Aligned_cols=92 Identities=14% Similarity=0.188 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHHhhcCCCCcc-eeeccCCCHHHHHHHhhh-cCceeeCCCCC
Q 006566 118 AGTVEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNYNIP-LVADIHFAPSVALRVAEC-FDKIRVNPGNF 192 (640)
Q Consensus 118 ~atv~Qi~rl~~aGceiVRvtvp~~---~~A~~l~~I~~~L~~~g~~iP-LVADIHF~~~~Al~Aa~~-v~KVRINPGN~ 192 (640)
..-+++.+..+++|+..+++-+-.. -..++|..|++. +++| ++=|.=.|+.-..+|.++ +|.|=+.--.+
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~-----v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREA-----VDLPLLRKDFVVDPFMLEEARAFGASAALLIVALL 139 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHH-----CCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHh-----cCCCEEECCcCCCHHHHHHHHHcCCCEEEECccch
Confidence 3457888999999999999943322 267899999985 7888 455666777555667777 88876643222
Q ss_pred CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 193 ~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
. +.++.+++.|+++|....+-|
T Consensus 140 ~------------------------~~l~~l~~~a~~lGl~~lvev 161 (254)
T 1vc4_A 140 G------------------------ELTGAYLEEARRLGLEALVEV 161 (254)
T ss_dssp G------------------------GGHHHHHHHHHHHTCEEEEEE
T ss_pred H------------------------HHHHHHHHHHHHCCCeEEEEE
Confidence 1 248889999999998887666
No 364
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=55.29 E-value=17 Score=38.33 Aligned_cols=113 Identities=10% Similarity=0.085 Sum_probs=70.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (640)
+|.+-.|+|=- | -.-|.+.+++-+++|.+.|.+.+===+| .++-+.+++++++ +++||.+|=++. +.-+.
T Consensus 229 ~g~~~~l~vDa--N-~~~~~~~A~~~~~~l~~~~l~~iEqP~~-~~d~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~ 299 (412)
T 4h1z_A 229 LGPAVRIACDM--H-WAHTASEAVALIKAMEPHGLWFAEAPVR-TEDIDGLARVAAS-----VSTAIAVGEEWRTVHDMV 299 (412)
T ss_dssp HCSSSEEEEEC--C-SCCCHHHHHHHHHHHGGGCEEEEECCSC-TTCHHHHHHHHHH-----CSSEEEECTTCCSHHHHH
T ss_pred cCCeEEEEecc--c-cCCCHHHHHHHHHhhcccccceecCCCC-ccchHHHHHHHhh-----cCCccccCCcccchHhHH
Confidence 45555555521 1 1246777788888888887655431122 2456778888885 889999996654 44444
Q ss_pred HHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCC
Q 006566 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (640)
Q Consensus 177 ~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGS 242 (640)
.+++ +++=|.+.++. |.-. ....+...|+.+|+++=+|.+.||
T Consensus 300 ~~i~~~a~div~~d~~~-GGit----------------------~~~kia~~A~~~gi~v~~h~~~~~ 344 (412)
T 4h1z_A 300 PRVARRALAIVQPEMGH-KGIT----------------------QFMRIGAYAHVHHIKVIPHATIGA 344 (412)
T ss_dssp HHHHTTCCSEECCCHHH-HHHH----------------------HHHHHHHHHHHTTCEECCCCCSSC
T ss_pred HHHHcCCCCEEEecCCC-CChH----------------------HHHHHHHHHHHCCCcEEecCCcch
Confidence 4443 37766665542 3211 266788999999999966655444
No 365
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=54.62 E-value=31 Score=33.33 Aligned_cols=68 Identities=13% Similarity=0.083 Sum_probs=48.1
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHHHHhhh-cCceeeCCCC
Q 006566 120 TVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNPGN 191 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~~------~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al~Aa~~-v~KVRINPGN 191 (640)
.++.++++.++|++.+-++-++.. ..+.++.|++ .+++|+++.--++ +.-+..+.+. +++|=+.-.-
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~-----~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~ 106 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRP-----LTTLPIIASGGAGKMEHFLEAFLAGADKALAASVF 106 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGG-----GCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHH-----hcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHH
Confidence 577888999999999999865532 2566666665 3789999976655 3445566666 8888776544
Q ss_pred C
Q 006566 192 F 192 (640)
Q Consensus 192 ~ 192 (640)
+
T Consensus 107 ~ 107 (266)
T 2w6r_A 107 H 107 (266)
T ss_dssp -
T ss_pred H
Confidence 4
No 366
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=54.44 E-value=30 Score=35.90 Aligned_cols=67 Identities=10% Similarity=0.160 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecC----C-HHHHHHHHHHHHHhhcCCCCcceeeccC--CC-HHHHHHHhhhcCce
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQ----G-KREADACFEIKNSLVQKNYNIPLVADIH--FA-PSVALRVAECFDKI 185 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp----~-~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~-~~~Al~Aa~~v~KV 185 (640)
|.+..++++++..++|...+.+-+- + .++.+.++.||+. -|-++||..|.| |+ +.-|+..++.+++.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a---~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~ 220 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREA---AGPEMEVQIDLASKWHTCGHSAMMAKRLEEF 220 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHH---HCSSSEEEEECTTTTCSHHHHHHHHHHSGGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHH---hCCCCeEEEECCCCCCCHHHHHHHHHHhhhc
Confidence 4488899999999999999999874 2 4566777777764 267899999998 55 66666666666654
No 367
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=54.12 E-value=1e+02 Score=30.94 Aligned_cols=91 Identities=14% Similarity=0.245 Sum_probs=64.3
Q ss_pred HHHHHHHHHHcCCCEEEEecCCH---HHHHHHHHHHHHhhcCCCCccee-eccCCCHHHHHHHhhh-cCceeeCCCCCCc
Q 006566 120 TVEEVMRIADQGADLVRITVQGK---READACFEIKNSLVQKNYNIPLV-ADIHFAPSVALRVAEC-FDKIRVNPGNFAD 194 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~---~~A~~l~~I~~~L~~~g~~iPLV-ADIHF~~~~Al~Aa~~-v~KVRINPGN~~d 194 (640)
-+++.+..+++|+..++|-+... -..+.|+.|++. +++|++ -|.=.|+.-..+|..+ +|.|=+.-.-+.+
T Consensus 74 p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~-----v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~ 148 (272)
T 3qja_A 74 PAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRAS-----VSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQ 148 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHH-----CSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCH
T ss_pred HHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHh-----CCCCEEECccccCHHHHHHHHHcCCCEEEEecccCCH
Confidence 36778889999999999987655 246788888875 778875 5666777645667677 8888764222222
Q ss_pred hhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 195 ~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
. .+.++++.|+++|...=+.+
T Consensus 149 -~----------------------~l~~l~~~a~~lGl~~lvev 169 (272)
T 3qja_A 149 -S----------------------VLVSMLDRTESLGMTALVEV 169 (272)
T ss_dssp -H----------------------HHHHHHHHHHHTTCEEEEEE
T ss_pred -H----------------------HHHHHHHHHHHCCCcEEEEc
Confidence 1 27788999999988763333
No 368
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=53.52 E-value=37 Score=35.51 Aligned_cols=62 Identities=29% Similarity=0.457 Sum_probs=46.8
Q ss_pred HHHHHHHHHHcCCCEEEE-ecCC--HHHHHHHHHHHHHhhcCCC-Ccceee-ccCCCHHHHHHHhhh-cCceee
Q 006566 120 TVEEVMRIADQGADLVRI-TVQG--KREADACFEIKNSLVQKNY-NIPLVA-DIHFAPSVALRVAEC-FDKIRV 187 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRv-tvp~--~~~A~~l~~I~~~L~~~g~-~iPLVA-DIHF~~~~Al~Aa~~-v~KVRI 187 (640)
+.+++.++.++|++.|=+ +.++ ..-.+.++.|++. + ++|+++ +++ ++..|..|.++ +|-|-+
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~-----~~~~pviv~~v~-~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK-----YPNLDLIAGNIV-TKEAALDLISVGADCLKV 221 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH-----CTTCEEEEEEEC-SHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH-----CCCCeEEEcCCC-cHHHHHHHHhcCCCEEEE
Confidence 467888899999999987 3333 2345566667764 4 689996 665 58999999998 999988
No 369
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=53.06 E-value=59 Score=34.27 Aligned_cols=86 Identities=13% Similarity=0.171 Sum_probs=61.0
Q ss_pred cCCCCceEEEeccCCCCCC-HHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceeeccC--CCH
Q 006566 98 IGSEHPIRVQTMTTNDTKD-VAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIH--FAP 172 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~D-v~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~ 172 (640)
+||...=+|..-++.-..| .+...+++.++.+.|..-+.+-++ ...+.+.++.|++. -|-++.|..|-| |++
T Consensus 169 LGG~~~~~v~~y~s~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v~~vR~~---~g~~~~l~vDaN~~~~~ 245 (412)
T 4h1z_A 169 LGGQRRDRIAAYISGLPEDTRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEMEILRER---LGPAVRIACDMHWAHTA 245 (412)
T ss_dssp TTCCCCSEEEEEECCCCCSSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHH---HCSSSEEEEECCSCCCH
T ss_pred cCCCCCceEEEEeccCCCCcHHHHHHHHHHHHhcCcceeccccccchhhHHHHHHHHHhc---cCCeEEEEeccccCCCH
Confidence 6776655565555544444 456677788999999999999864 34457778888775 367899999998 466
Q ss_pred HHHHHHhhhcCcee
Q 006566 173 SVALRVAECFDKIR 186 (640)
Q Consensus 173 ~~Al~Aa~~v~KVR 186 (640)
.-|+..++.+++..
T Consensus 246 ~~A~~~~~~l~~~~ 259 (412)
T 4h1z_A 246 SEAVALIKAMEPHG 259 (412)
T ss_dssp HHHHHHHHHHGGGC
T ss_pred HHHHHHHHhhcccc
Confidence 77777777666543
No 370
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=52.92 E-value=20 Score=40.34 Aligned_cols=159 Identities=18% Similarity=0.215 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCC-CcceeeccCCCHHH--HHHHhhhcCceeeCCCCCC
Q 006566 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNY-NIPLVADIHFAPSV--ALRVAECFDKIRVNPGNFA 193 (640)
Q Consensus 117 v~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~-~iPLVADIHF~~~~--Al~Aa~~v~KVRINPGN~~ 193 (640)
++.-.+.|+...+.|+|.|=+. =.+.|+.+.++++.|.+.|. +++++|=|--.--+ ..+-++..|.|=|-||.++
T Consensus 172 tekD~~di~~~l~~g~d~v~~s--fV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~DgImVargDLg 249 (587)
T 2e28_A 172 TEKDRADILFGIRQGIDFIAAS--FVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADGLMVARGDLG 249 (587)
T ss_dssp CHHHHHHHHHHHHHTCSEEEES--SCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHH
T ss_pred CcccHHHHHHHHHcCCCEEEEC--CCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCEEEEcCchhh
Confidence 3555677888999999997554 44455555555666667786 89999998432222 1122334799999999887
Q ss_pred chhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHH--
Q 006566 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRK-- 271 (640)
Q Consensus 194 d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~-- 271 (640)
-.-. ++++-..-+.++++|+++|+|+=+.|. =|+.= -+. ..|. =-|--+++.-
T Consensus 250 vei~---------------~~~v~~~qk~ii~~~~~~gkpvi~ATQ--mLeSM--i~~-p~PT-----RAE~sDvanav~ 304 (587)
T 2e28_A 250 VEIP---------------AEEVPLIQKLLIKKSNMLGKPVITATQ--MLDSM--QRN-PRPT-----RAEASDVANAIF 304 (587)
T ss_dssp HHSC---------------GGGHHHHHHHHHHHHHHHTCCEEEESS--SSGGG--GTC-SSCC-----HHHHHHHHHHHH
T ss_pred hhcC---------------HHHHHHHHHHHHHHHHHcCCCeEEech--hhHhh--ccC-CCcc-----HHHHhccchhhh
Confidence 5221 134445557899999999999955552 23221 111 1220 0122233322
Q ss_pred CCCCcEEEE---EEeCChhhHHHHHHHHHHHHHH
Q 006566 272 LDFHNFLFS---MKASNPVVMVQAYRLLVAEMYV 302 (640)
Q Consensus 272 ~~F~diviS---mKsSn~~~mV~AyRlL~~~m~~ 302 (640)
-|-+-+.+| .+-.-|...|+....++.+.++
T Consensus 305 dG~DavMLSgETA~G~yPveaV~~m~~I~~~~E~ 338 (587)
T 2e28_A 305 DGTDAVMLSGETAAGQYPVEAVKTMHQIALRTEQ 338 (587)
T ss_dssp HTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHT
T ss_pred hCcceeeecccccCCCCHHHHHHHHHHHHHHHhh
Confidence 366777776 4556677778888888877654
No 371
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=52.69 E-value=39 Score=33.39 Aligned_cols=140 Identities=16% Similarity=0.094 Sum_probs=84.9
Q ss_pred HHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhc-----C---------------------CCCcceeeccCCCHHHHHH
Q 006566 124 VMRIADQGADLVRITVQGKREADACFEIKNSLVQ-----K---------------------NYNIPLVADIHFAPSVALR 177 (640)
Q Consensus 124 i~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~-----~---------------------g~~iPLVADIHF~~~~Al~ 177 (640)
|+++.++|++- |-+|-.+.++.++.+.+.++. + +-++++++=| =+|.....
T Consensus 84 i~~~l~~g~~g--I~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~I-Et~~av~~ 160 (256)
T 1dxe_A 84 IKRLLDIGFYN--FLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQI-ESQQGVDN 160 (256)
T ss_dssp HHHHHHTTCCE--EEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEE-CSHHHHHT
T ss_pred HHHHHhcCCce--eeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEE-CCHHHHHh
Confidence 78888999987 566888878777888777642 1 1246666655 34544443
Q ss_pred Hhhh-----cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhC
Q 006566 178 VAEC-----FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYG 252 (640)
Q Consensus 178 Aa~~-----v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryG 252 (640)
+-++ +|-+=|-|+.+.-.-. ..|+ .+...+......++..|+++|++. |+-.
T Consensus 161 ~~eIa~~~~vd~l~iG~~DL~~~lg----~~~~-----~~~p~v~~a~~~iv~aa~a~G~~~--~v~~------------ 217 (256)
T 1dxe_A 161 VDAIAATEGVDGIFVGPSDLAAALG----HLGN-----ASHPDVQKAIQHIFNRASAHGKPS--GILA------------ 217 (256)
T ss_dssp HHHHHTSTTCCEEEECHHHHHHHTT----CTTC-----TTSHHHHHHHHHHHHHHHHTTCCE--EEEC------------
T ss_pred HHHHhCCCCCCEEEEChHHHHHHhC----CCCC-----CCCHHHHHHHHHHHHHHHHhCCce--EEec------------
Confidence 2222 5555566654432110 1111 111224455677899999999997 5522
Q ss_pred CChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHH
Q 006566 253 DSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300 (640)
Q Consensus 253 dtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m 300 (640)
.+| +.++.+.++||+-+.++ +|...+.++.+.+++.+
T Consensus 218 ~d~--------~~~~~~~~~G~~~~s~~---~d~~~l~~~~~~~~~~~ 254 (256)
T 1dxe_A 218 PVE--------ADARRYLEWGATFVAVG---SDLGVFRSATQKLADTF 254 (256)
T ss_dssp CSH--------HHHHHHHHTTCCEEEEE---EHHHHHHHHHHHHHHHH
T ss_pred CCH--------HHHHHHHHcCCCEEEec---hHHHHHHHHHHHHHHHh
Confidence 223 36677789999977665 45566667777766653
No 372
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=52.65 E-value=40 Score=35.73 Aligned_cols=68 Identities=10% Similarity=0.179 Sum_probs=51.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC--HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG--KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~--~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.+.+..++++.++.++|.+.|.|-+-+ ..+.+.++.|++.+ |-++||..|.| |++.-|...++.+++.
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v~avR~a~---G~d~~l~vDan~~~~~~~a~~~~~~l~~~ 268 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVGANVQDDIRRCRLARAAI---GPDIAMAVDANQRWDVGPAIDWMRQLAEF 268 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH---CSSSEEEEECTTCCCHHHHHHHHHTTGGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCCHHHHHHHHHHHHHhc---CCCCeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 477899999999999999999998753 34567777777753 67899999987 5566566666666654
No 373
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=52.61 E-value=38 Score=32.17 Aligned_cols=97 Identities=16% Similarity=0.132 Sum_probs=61.1
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHH--HHHHHHHHHHHhhcCCC-CcceeeccCCC---HHHHHHHhhh
Q 006566 108 TMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKR--EADACFEIKNSLVQKNY-NIPLVADIHFA---PSVALRVAEC 181 (640)
Q Consensus 108 SMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~--~A~~l~~I~~~L~~~g~-~iPLVADIHF~---~~~Al~Aa~~ 181 (640)
|+-.-|..|.+..++.++++.+ .++.+=+-.+-.. -.+.++.||+ . + +.|++.|.||. ...+..++++
T Consensus 6 ~ilalD~~~~~~~~~~~~~~~~-~v~~~kv~~~~f~~~G~~~i~~l~~----~-~p~~~v~lD~kl~dip~t~~~~~~~~ 79 (216)
T 1q6o_A 6 LQVALDNQTMDSAYETTRLIAE-EVDIIEVGTILCVGEGVRAVRDLKA----L-YPHKIVLADAKIADAGKILSRMCFEA 79 (216)
T ss_dssp EEEEECCSSHHHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHH----H-CTTSEEEEEEEECSCHHHHHHHHHHT
T ss_pred eEEEECCCCHHHHHHHHHHhcc-cCCEEEECHHHHHHhCHHHHHHHHH----h-CCCCeEEEEEEecccHHHHHHHHHhC
Confidence 5566677888888887777753 4576655432111 1123444444 2 3 47888999995 3445567777
Q ss_pred -cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 182 -FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 182 -v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
+|-|=+.+.- +. . .+.++++.|+++|...
T Consensus 80 Gad~itvh~~~-g~-~----------------------~l~~~~~~~~~~g~~~ 109 (216)
T 1q6o_A 80 NADWVTVICCA-DI-N----------------------TAKGALDVAKEFNGDV 109 (216)
T ss_dssp TCSEEEEETTS-CH-H----------------------HHHHHHHHHHHTTCEE
T ss_pred CCCEEEEeccC-CH-H----------------------HHHHHHHHHHHcCCCc
Confidence 8888887742 11 1 2667889999998875
No 374
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=52.58 E-value=67 Score=33.80 Aligned_cols=69 Identities=7% Similarity=0.199 Sum_probs=51.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEec--------------------CC--------HHHHHHHHHHHHHhhcCCCCccee
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITV--------------------QG--------KREADACFEIKNSLVQKNYNIPLV 165 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtv--------------------p~--------~~~A~~l~~I~~~L~~~g~~iPLV 165 (640)
..+.+..++++++..+.|...+.+-+ |+ ..+.+.++.||+. -|-++||.
T Consensus 141 ~~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~a---vG~d~~l~ 217 (409)
T 3go2_A 141 VTDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDG---AGPDVEIL 217 (409)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHH---HCTTSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHH---hCCCCEEE
Confidence 45789999999999999999999987 11 1235666666664 36789999
Q ss_pred eccC--CCHHHHHHHhhhcCce
Q 006566 166 ADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 166 ADIH--F~~~~Al~Aa~~v~KV 185 (640)
.|.| |++.-|+..++.+++.
T Consensus 218 vDaN~~~~~~~A~~~~~~L~~~ 239 (409)
T 3go2_A 218 LDLNFNAKPEGYLKILRELADF 239 (409)
T ss_dssp EECTTCSCHHHHHHHHHHTTTS
T ss_pred EECCCCCCHHHHHHHHHHHhhc
Confidence 9988 5566666666666654
No 375
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=52.49 E-value=24 Score=33.57 Aligned_cols=67 Identities=22% Similarity=0.239 Sum_probs=47.2
Q ss_pred HHHHHHHHHHcCCCEEEEec-----C-CHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCce-----ee
Q 006566 120 TVEEVMRIADQGADLVRITV-----Q-GKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKI-----RV 187 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtv-----p-~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KV-----RI 187 (640)
..+|+..+.++|+|.|=+-+ | +..-.+-++.+++.+ -.+|++.++| ++.-|..|.+. +|-| -+
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~----~~~~v~~~~~-t~~ea~~a~~~Gad~i~~~v~g~ 164 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKY----PNQLLMADIS-TFDEGLVAHQAGIDFVGTTLSGY 164 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHC----TTCEEEEECS-SHHHHHHHHHTTCSEEECTTTTS
T ss_pred hHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhC----CCCeEEEeCC-CHHHHHHHHHcCCCEEeeecccc
Confidence 57899999999999886543 2 122356677777642 2688999998 56668888777 8877 45
Q ss_pred CCCC
Q 006566 188 NPGN 191 (640)
Q Consensus 188 NPGN 191 (640)
|||.
T Consensus 165 ~~~~ 168 (234)
T 1yxy_A 165 TPYS 168 (234)
T ss_dssp STTS
T ss_pred CCCC
Confidence 5654
No 376
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=52.42 E-value=1.3e+02 Score=27.03 Aligned_cols=47 Identities=11% Similarity=0.210 Sum_probs=32.1
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChh
Q 006566 221 SPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPV 287 (640)
Q Consensus 221 ~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~ 287 (640)
.++++.||++|+.+.|=|| |+|+++.+.+ ++ +. .+.+.||+|+.|..
T Consensus 22 ~~l~~~~~~~g~~~~l~TN-G~l~~~~~~~-----------------l~-~~-~d~v~isld~~~~~ 68 (182)
T 3can_A 22 IDILKRCGQQGIHRAVDTT-LLARKETVDE-----------------VM-RN-CELLLIDLKSMDST 68 (182)
T ss_dssp HHHHHHHHHTTCCEEEECT-TCCCHHHHHH-----------------HH-HT-CSEEEEECCCSCHH
T ss_pred HHHHHHHHHCCCcEEEECC-CCCCHHHHHH-----------------HH-hh-CCEEEEECCCCCHH
Confidence 6899999999999888887 5676432211 22 22 45578888887643
No 377
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=52.34 E-value=24 Score=36.69 Aligned_cols=84 Identities=10% Similarity=0.110 Sum_probs=53.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHH-cCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccCCC--
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIAD-QGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHFA-- 171 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~-aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-- 171 (640)
+||..+=+|..-.+....|.+..++++.+..+ .|...+.+-+-. .++.+.++.|++. -|-+++|..|.|-.
T Consensus 129 LGg~~r~~v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a---~g~~~~l~vDaN~~~~ 205 (381)
T 3fcp_A 129 LGGALQTALPVLWTLASGDTAKDIAEGEKLLAEGRHRAFKLKIGARELATDLRHTRAIVEA---LGDRASIRVDVNQAWD 205 (381)
T ss_dssp TTCCSCSEEEBCEEECSSCHHHHHHHHHHHTC----CEEEEECCSSCHHHHHHHHHHHHHH---TCTTCEEEEECTTCBC
T ss_pred hCCCCCCceeeEEEecCCChHHHHHHHHHHHHhCCCCEEEEecCCCChHHHHHHHHHHHHH---cCCCCeEEEECCCCCC
Confidence 35543333333222233478888999988877 699999988743 5677888888874 36679999998855
Q ss_pred HHHHHHHhhhcCc
Q 006566 172 PSVALRVAECFDK 184 (640)
Q Consensus 172 ~~~Al~Aa~~v~K 184 (640)
+.-|+..++.+++
T Consensus 206 ~~~A~~~~~~l~~ 218 (381)
T 3fcp_A 206 AATGAKGCRELAA 218 (381)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 5555555554544
No 378
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=52.26 E-value=60 Score=33.22 Aligned_cols=99 Identities=16% Similarity=0.191 Sum_probs=65.0
Q ss_pred HHHhhhHhhHHHHHHHHHHcCC-eEEEeeCCCCCcHhHH--------HHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEE
Q 006566 211 KELQHIEEVFSPLVEKCKKYGR-AVRIGTNHGSLSDRIM--------SYYGDSPRGMVESAFEFARICRKLDFHNFLFSM 281 (640)
Q Consensus 211 ~Ele~I~~~f~~lV~~~Ke~g~-aIRIGvNhGSLs~ril--------~ryGdtp~gMVeSAle~~~i~e~~~F~diviSm 281 (640)
+|++.+-+.|..-.+.|++.|- .|-|=..||-|=..++ .+||.+.+.=..-++|-++-.++.= ++-|++
T Consensus 137 ~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v--~~pv~v 214 (338)
T 1z41_A 137 EKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW--DGPLFV 214 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC--CSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc--CCcEEE
Confidence 3577777888888888888774 5667677886644444 3477665544555566665444332 556788
Q ss_pred EeCCh-----hhHHHHHHHHHHHHHHcCCCcceEEE
Q 006566 282 KASNP-----VVMVQAYRLLVAEMYVHGWDYPLHLG 312 (640)
Q Consensus 282 KsSn~-----~~mV~AyRlL~~~m~~~g~dyPLHLG 312 (640)
|-|-. -...+....+++++++.|.+| ||+.
T Consensus 215 ris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~-i~v~ 249 (338)
T 1z41_A 215 RVSASDYTDKGLDIADHIGFAKWMKEQGVDL-IDCS 249 (338)
T ss_dssp EEECCCCSTTSCCHHHHHHHHHHHHHTTCCE-EEEE
T ss_pred EecCcccCCCCCCHHHHHHHHHHHHHcCCCE-EEEe
Confidence 85431 123556778899999999998 6764
No 379
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=51.86 E-value=28 Score=32.72 Aligned_cols=90 Identities=17% Similarity=0.141 Sum_probs=55.5
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHH------HHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHHHHhhh-cCceeeCCCC
Q 006566 120 TVEEVMRIADQGADLVRITVQGKR------EADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNPGN 191 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~~------~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al~Aa~~-v~KVRINPGN 191 (640)
.++.++++.++|++.|=++.-+.. +-+.++++++. .++|++|+--.+ +.=+.++++. ++.|=+--.=
T Consensus 156 ~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~-----~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal 230 (253)
T 1h5y_A 156 AVKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADS-----VRIPVIASGGAGRVEHFYEAAAAGADAVLAASLF 230 (253)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHH-----CSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHh-----cCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHH
Confidence 456678889999999988643321 34566777764 589999987665 4555555555 6655331100
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEE
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRI 236 (640)
+.. . ..+.++.+.++++|.++|+
T Consensus 231 ~~~-~---------------------~~~~~~~~~l~~~g~~~~~ 253 (253)
T 1h5y_A 231 HFR-V---------------------LSIAQVKRYLKERGVEVRI 253 (253)
T ss_dssp HTT-S---------------------SCHHHHHHHHHHTTCBCCC
T ss_pred HcC-C---------------------CCHHHHHHHHHHcCCCCCC
Confidence 000 0 0145677778889988873
No 380
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=51.56 E-value=1.1e+02 Score=32.02 Aligned_cols=145 Identities=10% Similarity=0.094 Sum_probs=81.0
Q ss_pred HHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhc-----CCC---------------------------CcceeeccC
Q 006566 122 EEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ-----KNY---------------------------NIPLVADIH 169 (640)
Q Consensus 122 ~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~-----~g~---------------------------~iPLVADIH 169 (640)
.+|+++.++|++- |-+|-.+.++-+..+++.++. +|+ +++|++=|
T Consensus 108 ~di~~~LdaGa~g--ImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mI- 184 (339)
T 1izc_A 108 VSLSTALDAGAAG--IVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQI- 184 (339)
T ss_dssp HHHHHHHHHTCSE--EEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEE-
T ss_pred HHHHHHHhCCCCE--EEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEE-
Confidence 5899999999996 556777777777777666543 222 24455544
Q ss_pred CCHHHHHHHhhh-----cCceeeCCCCCCchhhhcc--ccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCC
Q 006566 170 FAPSVALRVAEC-----FDKIRVNPGNFADRRAQFE--QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS 242 (640)
Q Consensus 170 F~~~~Al~Aa~~-----v~KVRINPGN~~d~~k~F~--~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGS 242 (640)
=+|.....+-++ +|-|=|-|+.+.-.-..-. .+-+.. . ..+......++..|+++|++. |+-.++
T Consensus 185 Et~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~---~---p~v~~a~~~iv~aaraaGk~~--g~~~~d 256 (339)
T 1izc_A 185 ESVKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVP---H---PTFVEAMTKFSTAAQRNGVPI--FGGALS 256 (339)
T ss_dssp CSHHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCC---C---HHHHHHHHHHHHHHHHTTCCE--EEECSS
T ss_pred ChHHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCC---C---HHHHHHHHHHHHHHHHhCCce--eEecCC
Confidence 334433322222 4455555554432100000 000110 1 234556678899999999998 553322
Q ss_pred CcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHH
Q 006566 243 LSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEM 300 (640)
Q Consensus 243 Ls~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m 300 (640)
| +.++.+..+||+-+ ++ ++++..+.++++..++.+
T Consensus 257 ------------~--------~~a~~~~~~Gf~~l--~~-~~di~~l~~~~~~~v~~a 291 (339)
T 1izc_A 257 ------------V--------DMVPSLIEQGYRAI--AV-QFDVWGLSRLVHGSLAQA 291 (339)
T ss_dssp ------------G--------GGHHHHHHTTEEEE--EE-EEHHHHHHHHHHHHHHHH
T ss_pred ------------H--------HHHHHHHHhCCCEE--Ee-cHHHHHHHHHHHHHHHHH
Confidence 2 46677889999864 44 346555556665555444
No 381
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=51.39 E-value=25 Score=36.41 Aligned_cols=92 Identities=8% Similarity=0.059 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC--HHH-HHHHh--hhcCceeeCCCCCC
Q 006566 119 GTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PSV-ALRVA--ECFDKIRVNPGNFA 193 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~--~~~-Al~Aa--~~v~KVRINPGN~~ 193 (640)
..++-+++|.+.+-+.+===+ ..++-+.+..++++ +++||++|=.+. +.. +..++ .+++-|.|.|..+|
T Consensus 223 ~a~~~~~~l~~~~i~~iEqP~-~~~d~~~~~~l~~~-----~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ik~~~~G 296 (377)
T 2pge_A 223 NAPQRLKRLSQFHLHSIEQPI-RQHQWSEMAALCAN-----SPLAIALDEELIGLGAEQRSAMLDAIRPQYIILKPSLLG 296 (377)
T ss_dssp THHHHHHHHHTTCCSEEECCB-CSSCHHHHHHHHHH-----CSSCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHHHHT
T ss_pred HHHHHHHHHhcCCCcEEEccC-CcccHHHHHHHHhh-----CCCcEEECCccCCcchHHHHHHHHhCCCCEEEECchhcC
Confidence 334444555554443332111 11345566666664 689999995542 222 23333 44999999999988
Q ss_pred chhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 194 DRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 194 d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.-.. ...++..|+++|+++=+|.
T Consensus 297 Git~----------------------~~~i~~~A~~~g~~~~~~~ 319 (377)
T 2pge_A 297 GFHY----------------------AGQWIELARERGIGFWITS 319 (377)
T ss_dssp SHHH----------------------HHHHHHHHHHTTCEEEEBC
T ss_pred CHHH----------------------HHHHHHHHHHCCCeEEecC
Confidence 7442 6778999999999987765
No 382
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=51.16 E-value=46 Score=32.82 Aligned_cols=46 Identities=22% Similarity=0.315 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChh
Q 006566 219 VFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPV 287 (640)
Q Consensus 219 ~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~ 287 (640)
.+.++++.++++|+.+.|-|| |++++ . +++++...+.||+++.|..
T Consensus 144 ~l~~li~~~~~~g~~~~l~TN-G~~~~-~---------------------l~~L~~~~v~isld~~~~~ 189 (311)
T 2z2u_A 144 YLDELIKIFHKNGFTTFVVSN-GILTD-V---------------------IEKIEPTQLYISLDAYDLD 189 (311)
T ss_dssp THHHHHHHHHHTTCEEEEEEC-SCCHH-H---------------------HHHCCCSEEEEECCCSSTT
T ss_pred hHHHHHHHHHHCCCcEEEECC-CCCHH-H---------------------HHhCCCCEEEEEeecCCHH
Confidence 488899999999999999888 77621 1 1223668899999997643
No 383
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=51.00 E-value=92 Score=31.15 Aligned_cols=49 Identities=16% Similarity=0.224 Sum_probs=35.4
Q ss_pred HHHHHHHHHHcCC--eEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChh
Q 006566 220 FSPLVEKCKKYGR--AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPV 287 (640)
Q Consensus 220 f~~lV~~~Ke~g~--aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~ 287 (640)
|.++++.+++++. .+.|-|| |++-+ +.++.+.+.|...+.||+.+.++.
T Consensus 83 l~~li~~~~~~~~~~~i~i~TN-G~ll~------------------~~~~~L~~~g~~~v~iSld~~~~~ 133 (340)
T 1tv8_A 83 LDVLIAKLNQIDGIEDIGLTTN-GLLLK------------------KHGQKLYDAGLRRINVSLDAIDDT 133 (340)
T ss_dssp HHHHHHHHTTCTTCCEEEEEEC-STTHH------------------HHHHHHHHHTCCEEEEECCCSSHH
T ss_pred HHHHHHHHHhCCCCCeEEEEeC-ccchH------------------HHHHHHHHCCCCEEEEecCCCCHH
Confidence 6788899988866 7888888 45421 133445567888999999998754
No 384
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=50.89 E-value=28 Score=33.96 Aligned_cols=49 Identities=12% Similarity=-0.023 Sum_probs=35.2
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceee
Q 006566 112 NDTKDVAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVA 166 (640)
Q Consensus 112 t~T~Dv~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVA 166 (640)
..|-+.+...+...++.+.|| ||++++. +.+|.-.|-+..++ .+.|+||
T Consensus 119 ~~tp~~~el~~~~~~~~~~ga-ivKia~~a~~~~D~l~ll~~~~~-----~~~P~I~ 169 (219)
T 2egz_A 119 ELTPPNWIIREVLREGYRYGG-IPKIAVKANSYEDVARLLCISRQ-----VEGEKIL 169 (219)
T ss_dssp SCCCCHHHHHHHHHHHHHTTS-EEEEEEECSSHHHHHHHHHHHTT-----SCSCBEE
T ss_pred CCCcCHHHHHHHHHHHHHcCC-EEEEEEccCCHHHHHHHHHHHHh-----CCCCEEE
Confidence 334457888899999999999 9999965 55566666665543 4567765
No 385
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=50.83 E-value=38 Score=31.79 Aligned_cols=58 Identities=14% Similarity=0.182 Sum_probs=43.3
Q ss_pred cCCCCCCHHHHHHHHHHHHHcCCC-EEEEecCCHHHHHHHHHHHHHhhcCCC--CcceeeccCCCHHHH
Q 006566 110 TTNDTKDVAGTVEEVMRIADQGAD-LVRITVQGKREADACFEIKNSLVQKNY--NIPLVADIHFAPSVA 175 (640)
Q Consensus 110 t~t~T~Dv~atv~Qi~rl~~aGce-iVRvtvp~~~~A~~l~~I~~~L~~~g~--~iPLVADIHF~~~~A 175 (640)
|-+.|..+.+-.+...++.+.||+ ++=|++.+...-++..+=. +. ++||++|-+ -++|
T Consensus 55 Tp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~------~~~~~f~lLSD~~--~~~a 115 (171)
T 2xhf_A 55 VPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTV------DPEHKIRMLADMH--GEFT 115 (171)
T ss_dssp CTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHH------CTTCCSEEEECTT--SHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhc------CCCCCeEEEEeCC--chHH
Confidence 444566677777888889999998 9999999998877765421 34 799999944 4444
No 386
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=50.76 E-value=6.5 Score=40.31 Aligned_cols=140 Identities=15% Similarity=0.198 Sum_probs=87.4
Q ss_pred cCCCCceEEEecc--CCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhc--------CCCC-ccee-
Q 006566 98 IGSEHPIRVQTMT--TNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ--------KNYN-IPLV- 165 (640)
Q Consensus 98 IGG~~PI~VQSMt--~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~--------~g~~-iPLV- 165 (640)
|||+. +.|.+|. ..+..+.+.+-+++++|.+| |+|=..=.+.+ .-+.++.+.+.. +|+. +|+-
T Consensus 55 I~Gd~-v~V~~lv~~g~dPH~yeptp~d~~~l~~A--Dlvv~~G~~lE--~w~~~~~~~~~~~~~~v~~s~~i~~~~~~~ 129 (313)
T 1toa_A 55 IAQGD-VHLKGLMGPGVDPHLYTATAGDVEWLGNA--DLILYNGLHLE--TKMGEVFSKLRGSRLVVAVSETIPVSQRLS 129 (313)
T ss_dssp HHGGG-SEEEESCCTTCCTTTCCCCHHHHHHHHHC--SEEEECCTTCS--TTCHHHHHHHTTSSEEEEGGGGSCGGGSCB
T ss_pred HcCCc-eEEEEccCCCCCcccCCCCHHHHHHHHcC--CEEEEcCCCcH--HHHHHHHHhccCCCeEEEeecCcccccccc
Confidence 56665 8899995 45679999999999999775 66654434443 223333332211 1221 1221
Q ss_pred -----eccC--CCHHHHHHHhhh-cCc-eeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEE
Q 006566 166 -----ADIH--FAPSVALRVAEC-FDK-IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (640)
Q Consensus 166 -----ADIH--F~~~~Al~Aa~~-v~K-VRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRI 236 (640)
-|=| ++|..|...++. .+. +.+.|.|=..=++ .-+.|.++|+.+.+.++..+..+++.++.+
T Consensus 130 ~~~~~~DPHvWldp~n~~~~a~~I~~~L~~~DP~~a~~Y~~-------N~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~-- 200 (313)
T 1toa_A 130 LEEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTREFTQ-------RYQAYQQQLDKLDAYVRRKAQSLPAERRVL-- 200 (313)
T ss_dssp STTSCBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTSCGGGCEE--
T ss_pred cCCCCCCCceeCCHHHHHHHHHHHHHHHHHHChhhHHHHHH-------HHHHHHHHHHHHHHHHHHHHhhCCccCCEE--
Confidence 1333 678888877765 333 2377765322111 135699999999999999998888666665
Q ss_pred eeCCCCCcHhHHHHhC
Q 006566 237 GTNHGSLSDRIMSYYG 252 (640)
Q Consensus 237 GvNhGSLs~ril~ryG 252 (640)
=|.|.++ .-+.++||
T Consensus 201 v~~H~af-~Yfa~~yG 215 (313)
T 1toa_A 201 VTAHDAF-GYFSRAYG 215 (313)
T ss_dssp EEEESCC-HHHHHHHT
T ss_pred EEECCcH-HHHHHHCC
Confidence 6778887 34667776
No 387
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=50.67 E-value=48 Score=32.28 Aligned_cols=68 Identities=25% Similarity=0.277 Sum_probs=38.6
Q ss_pred HHHHHHHHHHcCCCEE--EEecCCHHHHH---HHHHHHHHhhcCCCCcceeecc-----C----CCHH----HHHHHhhh
Q 006566 120 TVEEVMRIADQGADLV--RITVQGKREAD---ACFEIKNSLVQKNYNIPLVADI-----H----FAPS----VALRVAEC 181 (640)
Q Consensus 120 tv~Qi~rl~~aGceiV--Rvtvp~~~~A~---~l~~I~~~L~~~g~~iPLVADI-----H----F~~~----~Al~Aa~~ 181 (640)
.++|+++..++|++.| .+...+....+ .++++++..++ +.+|++.-+ | +++. +|..|.+.
T Consensus 101 ~~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~--~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~ 178 (273)
T 2qjg_A 101 IVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEY--WGMPLIAMMYPRGKHIQNERDPELVAHAARLGAEL 178 (273)
T ss_dssp ECSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHH--HTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHH--cCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHc
Confidence 3678888999999988 54433333222 33344443332 567777543 3 3442 22555555
Q ss_pred -cCceeeCC
Q 006566 182 -FDKIRVNP 189 (640)
Q Consensus 182 -v~KVRINP 189 (640)
++-|=++|
T Consensus 179 Gad~i~~~~ 187 (273)
T 2qjg_A 179 GADIVKTSY 187 (273)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEECC
Confidence 77777775
No 388
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=50.62 E-value=42 Score=35.03 Aligned_cols=76 Identities=8% Similarity=0.125 Sum_probs=56.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCH-----HHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh--cCceeeC
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGK-----READACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC--FDKIRVN 188 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~-----~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~--v~KVRIN 188 (640)
+.+.+++-+++|+++|+++|=+...+. ...+.++.||+. +++|+++=--+++.-|.++++. +|-|=+-
T Consensus 249 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~-----~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 249 EEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRER-----FHGVIIGAGAYTAEKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHH-----CCSEEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHH-----CCCCEEEECCcCHHHHHHHHHCCCccEEEEC
Confidence 566778889999999999999886321 124567778875 7899999766699999998886 7777665
Q ss_pred CCCCCchh
Q 006566 189 PGNFADRR 196 (640)
Q Consensus 189 PGN~~d~~ 196 (640)
=+-+++++
T Consensus 324 R~~l~~P~ 331 (364)
T 1vyr_A 324 RDYIANPD 331 (364)
T ss_dssp HHHHHCTT
T ss_pred HHHHhChh
Confidence 55555543
No 389
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=50.51 E-value=81 Score=32.31 Aligned_cols=211 Identities=14% Similarity=0.126 Sum_probs=108.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHH-----HHHHHHHHHHHhhcCCCCccee----eccCCCHHHHHHHhhh-cCce
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKR-----EADACFEIKNSLVQKNYNIPLV----ADIHFAPSVALRVAEC-FDKI 185 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~-----~A~~l~~I~~~L~~~g~~iPLV----ADIHF~~~~Al~Aa~~-v~KV 185 (640)
-.+..+++..++.+||+-+|-+-+-+.+ +++.+.++.+.+|++..++.+= +....++.-=+..++. =|-.
T Consensus 32 TpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~~~~Pe~a 111 (282)
T 2y7e_A 32 TPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPLALKPEMA 111 (282)
T ss_dssp SHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGGGGCCSEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHhhcCCCEE
Confidence 3689999999999999999999887732 4566666666666654344432 1222222211122222 2333
Q ss_pred eeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHH
Q 006566 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEF 265 (640)
Q Consensus 186 RINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~ 265 (640)
=+|.|-+.-.+..|.+- .+.+..+.+.|+|+|+..=|.+ | + .|++..+..+
T Consensus 112 sl~~gs~Nf~~~v~~n~--------------~~~~~~~~~~~~e~Gv~pE~e~------------f--d-~g~l~~~~~l 162 (282)
T 2y7e_A 112 TLNAGTLNFGDDIFINH--------------PADIIRLAEAFKQYNVVPEVEV------------Y--E-SGMVDAVARL 162 (282)
T ss_dssp EEECCCEEETTEEECCC--------------HHHHHHHHHHHHHTTCEEEEEE------------C--S-HHHHHHHHHH
T ss_pred EecccccccccccccCC--------------HHHHHHHHHHHHHcCCeEEEEE------------E--C-HHHHHHHHHH
Confidence 35555322111112111 1236667888888888888877 2 1 2555554443
Q ss_pred HHHHHHCCCC-------cEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEEEeecCCCCCcceeehHHHHHHHhhhcC
Q 006566 266 ARICRKLDFH-------NFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGL 338 (640)
Q Consensus 266 ~~i~e~~~F~-------diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAiGIG~LL~DGI 338 (640)
.+.|.- ++|+-++..-+ -..+....+.+.+-...-++| +.+.=.|..+--....|+..|.=.-=|+
T Consensus 163 ----~~~Gl~p~~p~~~~~VlGv~~g~~-~~~~~L~~~~~~lp~~~~~~~--wsv~g~Gr~q~p~~~~A~~~GGhvRVGl 235 (282)
T 2y7e_A 163 ----IKKGIITQNPLHIQFVLGVPGGMS-GKPKNLMYMMEHLKEEIPTAT--WAVAGIGRWHIPTSLIAMVTGGHIRCGF 235 (282)
T ss_dssp ----HHTTSCCCSSCEEEEEECCTTSCC-CCHHHHHHHHHHHHHHSTTCE--EEEEECGGGHHHHHHHHHTTTCEEEEST
T ss_pred ----HHcCCCCCCCeEEEEEEecCCCCC-CCHHHHHHHHHhcccccCCCe--EEEEecCcchHHHHHHHHHcCCCeEEcc
Confidence 334443 56665432211 112222222222221100344 5555455444445556666666666677
Q ss_pred CcEEEeec---CCCCchhhHHHHHHHh
Q 006566 339 GDTIRVSL---TEPPEKEIDPCRRLAN 362 (640)
Q Consensus 339 GDTIRVSL---TedP~~Ei~va~~ILq 362 (640)
.|+++.+- ..+-.+-|.-+.+|++
T Consensus 236 EDnl~~~~G~~A~sNa~lV~~~~~i~~ 262 (282)
T 2y7e_A 236 EDNIFYHKGVIAESNAQLVARLARIAK 262 (282)
T ss_dssp TTCCEEETTEECSCHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCCHHHHHHHHHHHHH
Confidence 77777762 1111223555556655
No 390
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=50.46 E-value=58 Score=33.59 Aligned_cols=95 Identities=8% Similarity=0.045 Sum_probs=59.3
Q ss_pred CHHHHHHHHHHHHHc-CCCEEEEecCCHHHHHHHHHHHHHhhcCCCC--cceeeccCCC-HHHHHHHhhhcCceeeCCCC
Q 006566 116 DVAGTVEEVMRIADQ-GADLVRITVQGKREADACFEIKNSLVQKNYN--IPLVADIHFA-PSVALRVAECFDKIRVNPGN 191 (640)
Q Consensus 116 Dv~atv~Qi~rl~~a-GceiVRvtvp~~~~A~~l~~I~~~L~~~g~~--iPLVADIHF~-~~~Al~Aa~~v~KVRINPGN 191 (640)
+.+..++-+++|.+. +.+.+===++ .++-+.+..++++ ++ +|+++|=.+. ..-...+..+++-|.|.|..
T Consensus 200 ~~~~a~~~~~~l~~~~~i~~iEqP~~-~~d~~~~~~l~~~-----~~~~ipIa~dE~~~~~~~~~~~~~a~d~i~ik~~~ 273 (372)
T 3cyj_A 200 TRKQALYWAGAFAREAGISYLEEPVS-SEDREGLRLLRDR-----GPGGVAIAAGEYEWTLPQLHDLAGCVDILQADVTR 273 (372)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEECSSC-TTCHHHHHHHHHH-----SCTTCEEEECTTCCSHHHHHHHHTTCSEEEECTTT
T ss_pred CHHHHHHHHHHHHhhcCCcEEECCCC-cccHHHHHHHHHh-----CCCCCCEECCCCccCHHHHHHHhCCCCEEecCchh
Confidence 445555555555555 5444321111 1234555555554 55 7999996654 33333334459999999999
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
.|.-.. ...+++.|+++|+++=+|.
T Consensus 274 ~GGit~----------------------~~~i~~~A~~~gi~~~~~~ 298 (372)
T 3cyj_A 274 CGGITG----------------------LLRVDGICRGHQIPFSAHC 298 (372)
T ss_dssp TTHHHH----------------------HTTHHHHHHHHTCCEEECS
T ss_pred hCCHHH----------------------HHHHHHHHHHcCCeecccc
Confidence 987432 5678999999999986664
No 391
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=50.42 E-value=25 Score=37.69 Aligned_cols=67 Identities=16% Similarity=0.233 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHcCCCEEEEec-C------------CHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cC
Q 006566 119 GTVEEVMRIADQGADLVRITV-Q------------GKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FD 183 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvtv-p------------~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~ 183 (640)
.|++++++++++|+|.|-+-. | +.-...++.++.+.++ ..++|+|||-=. ++.-+.+|+.. ++
T Consensus 193 ~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~--~~~IPVIA~GGI~~~~di~kalalGAd 270 (400)
T 3ffs_A 193 VTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVAS--KFGIPIIADGGIRYSGDIGKALAVGAS 270 (400)
T ss_dssp CSHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHT--TTTCCEEEESCCCSHHHHHHHHTTTCS
T ss_pred CCHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHH--hcCCCEEecCCCCCHHHHHHHHHcCCC
Confidence 367899999999999999821 0 1234567777777543 367999998554 46666677776 77
Q ss_pred ceee
Q 006566 184 KIRV 187 (640)
Q Consensus 184 KVRI 187 (640)
.|=|
T Consensus 271 ~V~v 274 (400)
T 3ffs_A 271 SVMI 274 (400)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7755
No 392
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=50.42 E-value=70 Score=33.99 Aligned_cols=50 Identities=12% Similarity=0.141 Sum_probs=31.4
Q ss_pred HHHHHHHHHHc-----CCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChh
Q 006566 220 FSPLVEKCKKY-----GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPV 287 (640)
Q Consensus 220 f~~lV~~~Ke~-----g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~ 287 (640)
+..+++.++++ +..|+|.+|-+++++. .++.+.+.|+..+-|++-|-|..
T Consensus 123 l~~ll~~i~~~~~~~~~~eitie~~p~~l~~e------------------~l~~L~~~G~~rislGvQS~~~~ 177 (457)
T 1olt_A 123 ISRLMKLLRENFQFNADAEISIEVDPREIELD------------------VLDHLRAEGFNRLSMGVQDFNKE 177 (457)
T ss_dssp HHHHHHHHHHHSCEEEEEEEEEEECSSSCCTH------------------HHHHHHHTTCCEEEEEEECCCHH
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEEccCcCCHH------------------HHHHHHHcCCCEEEEeeccCCHH
Confidence 56666666662 3568888888888654 44455556666666666665544
No 393
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=50.34 E-value=61 Score=31.44 Aligned_cols=152 Identities=17% Similarity=0.148 Sum_probs=82.6
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHcCCCE--EEEe----cCCHHH-HHHHHHHHHHhhcCCCCcceeeccC-CCH-HHHH
Q 006566 106 VQTMTTNDTKDVAGTVEEVMRIADQGADL--VRIT----VQGKRE-ADACFEIKNSLVQKNYNIPLVADIH-FAP-SVAL 176 (640)
Q Consensus 106 VQSMt~t~T~Dv~atv~Qi~rl~~aGcei--VRvt----vp~~~~-A~~l~~I~~~L~~~g~~iPLVADIH-F~~-~~Al 176 (640)
.=|++..| .....++++++.++|+++ +|+. +|+... .+.++.||+. ++.|+.++.= .|| +...
T Consensus 8 ~psila~D---~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~-----~~~~~~vhlmv~dp~~~i~ 79 (230)
T 1tqj_A 8 APSILSAD---FSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPL-----TKKTLDVHLMIVEPEKYVE 79 (230)
T ss_dssp EEBGGGSC---GGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGG-----CCSEEEEEEESSSGGGTHH
T ss_pred EEEeeecC---HhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhh-----cCCcEEEEEEccCHHHHHH
Confidence 45777766 555567888899999998 5664 233221 1344444442 4556544421 233 2345
Q ss_pred HHhhh-cCceeeCCC--CCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCC
Q 006566 177 RVAEC-FDKIRVNPG--NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGD 253 (640)
Q Consensus 177 ~Aa~~-v~KVRINPG--N~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGd 253 (640)
.|+++ ++-|=+-.. .. + ...++++.++++|..+=+-+|-.+..+++ ..
T Consensus 80 ~~~~aGadgv~vh~e~~~~-~------------------------~~~~~~~~i~~~g~~~gv~~~p~t~~e~~-~~--- 130 (230)
T 1tqj_A 80 DFAKAGADIISVHVEHNAS-P------------------------HLHRTLCQIRELGKKAGAVLNPSTPLDFL-EY--- 130 (230)
T ss_dssp HHHHHTCSEEEEECSTTTC-T------------------------THHHHHHHHHHTTCEEEEEECTTCCGGGG-TT---
T ss_pred HHHHcCCCEEEECcccccc-h------------------------hHHHHHHHHHHcCCcEEEEEeCCCcHHHH-HH---
Confidence 66666 777755544 21 1 14568899999998764445544443332 11
Q ss_pred ChHHHHHHHHHHHHHHHHCCCCcEEEEE-------EeCChhhHHHHHHHHHHHHHHcCCCcceEE
Q 006566 254 SPRGMVESAFEFARICRKLDFHNFLFSM-------KASNPVVMVQAYRLLVAEMYVHGWDYPLHL 311 (640)
Q Consensus 254 tp~gMVeSAle~~~i~e~~~F~diviSm-------KsSn~~~mV~AyRlL~~~m~~~g~dyPLHL 311 (640)
+++..+ ++.-| +.+-...+.+-.+.+.+...+.|.++|+-.
T Consensus 131 --------------~~~~~D---~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v 178 (230)
T 1tqj_A 131 --------------VLPVCD---LILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEV 178 (230)
T ss_dssp --------------TGGGCS---EEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEE
T ss_pred --------------HHhcCC---EEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 112222 33222 222234566666777766666677777643
No 394
>7odc_A Protein (ornithine decarboxylase); pyridoxal-5'-phosphate, PLP, group IV decarboxylase, polyami parasitical, chemotherapy target, putrescine; HET: PLP; 1.60A {Mus musculus} SCOP: b.49.2.3 c.1.6.1 PDB: 2on3_A 1d7k_A*
Probab=50.07 E-value=76 Score=33.49 Aligned_cols=149 Identities=17% Similarity=0.163 Sum_probs=70.0
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCc-ceeeccC-CCHHHHHHHhhhcCcee-eCCCCCCchhh
Q 006566 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNI-PLVADIH-FAPSVALRVAECFDKIR-VNPGNFADRRA 197 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~i-PLVADIH-F~~~~Al~Aa~~v~KVR-INPGN~~d~~k 197 (640)
.+=++.|.++|| .+.|-+..|++.+. +.|++- +++---. ..+.-...|++. .|+ + |+-+ .
T Consensus 74 ~~v~~~l~~~G~---g~dvaS~~E~~~~~-------~~G~~~~~Ii~~g~~k~~~ei~~a~~~--gv~~~---~vds-~- 136 (424)
T 7odc_A 74 RAIVSTLAAIGT---GFDCASKTEIQLVQ-------GLGVPAERVIYANPCKQVSQIKYAASN--GVQMM---TFDS-E- 136 (424)
T ss_dssp HHHHHHHHHHTC---EEEECSHHHHHHHH-------HTTCCGGGEEECCSSCCHHHHHHHHHT--TCCEE---EECS-H-
T ss_pred HHHHHHHHHcCC---cEEECCHHHHHHHH-------HcCCChhhEEECCCCCCHHHHHHHHHC--CCCEE---EeCC-H-
Confidence 344455678896 88999999887653 236653 3332222 223333344443 222 2 2222 1
Q ss_pred hccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCC-C-cHhHHHHhCCChHHHHHHHHHHHHHHHHCCCC
Q 006566 198 QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGS-L-SDRIMSYYGDSPRGMVESAFEFARICRKLDFH 275 (640)
Q Consensus 198 ~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGS-L-s~ril~ryGdtp~gMVeSAle~~~i~e~~~F~ 275 (640)
+||++|.+ .+++..+.+|| |.|. . .-..++|+|-+++. +.+.++.+.+.+..
T Consensus 137 -------------~el~~l~~-------~~~~~~v~lRv--n~~~~~~~~~~~skfG~~~~~----~~~~~~~~~~~~l~ 190 (424)
T 7odc_A 137 -------------IELMKVAR-------AHPKAKLVLRI--ATDDSKAVCRLSVKFGATLKT----SRLLLERAKELNID 190 (424)
T ss_dssp -------------HHHHHHHH-------HCTTCEEEEEB--CC-----------CCCBCHHH----HHHHHHHHHHTTCE
T ss_pred -------------HHHHHHHH-------hCCCCeEEEEE--CCCCCCCCCCCCCCCCCCHHH----HHHHHHHHHhCCCC
Confidence 24555544 34444455555 5441 1 12347999987743 45555666666542
Q ss_pred cEEEEE--Ee--CChhhHHHHH---HHHHHHHHHcCCCcce-EEE
Q 006566 276 NFLFSM--KA--SNPVVMVQAY---RLLVAEMYVHGWDYPL-HLG 312 (640)
Q Consensus 276 diviSm--Ks--Sn~~~mV~Ay---RlL~~~m~~~g~dyPL-HLG 312 (640)
=.=|+. =| .|+....++. +.+++.+.+.|++.+. ++|
T Consensus 191 l~Glh~H~gsq~~d~~~~~~a~~~~~~~~~~~~~~G~~~~~ldiG 235 (424)
T 7odc_A 191 VIGVSFHVGSGCTDPDTFVQAVSDARCVFDMATEVGFSMHLLDIG 235 (424)
T ss_dssp EEEEECCCCSSCCCTHHHHHHHHHHHHHHHHHHHHTCCCCEEECC
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCEEEeC
Confidence 122221 11 3444444443 3455566677765443 443
No 395
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=49.99 E-value=33 Score=35.70 Aligned_cols=76 Identities=18% Similarity=0.310 Sum_probs=56.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC----------H-HHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG----------K-READACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC- 181 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~----------~-~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~- 181 (640)
.+.+.+++-+++|.++|+++|=++..+ . -..+.++.||+. +++|+++---+ ++.-|.++++.
T Consensus 243 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-----~~iPVi~~GgI~s~e~a~~~l~~G 317 (363)
T 3l5l_A 243 QTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRRE-----AKLPVTSAWGFGTPQLAEAALQAN 317 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-----HTCCEEECSSTTSHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHH-----cCCcEEEeCCCCCHHHHHHHHHCC
Confidence 356788888999999999999988521 1 134566777875 57999999876 69999998876
Q ss_pred -cCceeeCCCCCCch
Q 006566 182 -FDKIRVNPGNFADR 195 (640)
Q Consensus 182 -v~KVRINPGN~~d~ 195 (640)
+|-|=+-=+-+.++
T Consensus 318 ~aD~V~iGR~~lanP 332 (363)
T 3l5l_A 318 QLDLVSVGRAHLADP 332 (363)
T ss_dssp SCSEEECCHHHHHCT
T ss_pred CccEEEecHHHHhCc
Confidence 78776654444443
No 396
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=49.91 E-value=84 Score=28.97 Aligned_cols=47 Identities=21% Similarity=0.355 Sum_probs=32.7
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCC--cHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCCh
Q 006566 220 FSPLVEKCKKYGRAVRIGTNHGSL--SDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNP 286 (640)
Q Consensus 220 f~~lV~~~Ke~g~aIRIGvNhGSL--s~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~ 286 (640)
+.++++.+|++|+.+.|-+| |++ .++.+. ++.+ . .+.+.||+++.|.
T Consensus 87 l~~l~~~~~~~~~~i~i~Tn-g~~~~~~~~~~-----------------~l~~-~-~~~v~isld~~~~ 135 (245)
T 3c8f_A 87 VRDWFRACKKEGIHTCLDTN-GFVRRYDPVID-----------------ELLE-V-TDLVMLDLKQMND 135 (245)
T ss_dssp HHHHHHHHHTTTCCEEEEEC-CCCCCCCHHHH-----------------HHHH-T-CSEEEEECCCSSH
T ss_pred HHHHHHHHHHcCCcEEEEeC-CCcCcCHHHHH-----------------HHHH-h-CCEEEEeCCCCCH
Confidence 57899999999999999999 676 332111 1222 2 4568899988764
No 397
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=49.59 E-value=24 Score=36.16 Aligned_cols=90 Identities=18% Similarity=0.251 Sum_probs=53.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHHHHh--hhcCceeeCCCCC
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVA--ECFDKIRVNPGNF 192 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al~Aa--~~v~KVRINPGN~ 192 (640)
+.+.+++-+++|.+.|.+++===+++ -+.+..++++ +++|+.+|=... +.-+...+ .+++-|.|.|...
T Consensus 136 ~~~~A~~~~~~L~~~~l~~iEqP~~~---~~~~~~l~~~-----~~iPIa~dEs~~~~~~~~~~i~~~a~d~i~ik~~~~ 207 (327)
T 2opj_A 136 DVDTAVRMIRLLDRFELEYVEQPCAT---VDELAEVRRR-----VSVPIAADESIRRAEDPLRVRDAEAADVVVLKVQPL 207 (327)
T ss_dssp CHHHHHHHHHHHGGGCEEEEECCSSS---HHHHHHHHHH-----CSSCEEC-----------CTTTTTCCSBEEECHHHH
T ss_pred CHHHHHHHHHHHHhcCCcEEeCCCCC---HHHHHHHHhh-----CCCCEEcCCCCCCHHHHHHHHHhCCCCEEEeCcccc
Confidence 45666666677776654443322332 4566777764 789999996543 33333333 3488899999988
Q ss_pred CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 193 ~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
|. +.+..+.|+.+|+++=+|.
T Consensus 208 GG-------------------------it~~~~ia~~~gi~~~~~~ 228 (327)
T 2opj_A 208 GG-------------------------VRAALRLAEECGLPVVVSS 228 (327)
T ss_dssp TS-------------------------HHHHHHHHHHTCSCEEEBC
T ss_pred CC-------------------------HHHHHHHHHHcCCcEEEcC
Confidence 87 5566677888898886654
No 398
>2dy3_A Alanine racemase; alpha/beta barrel, isomerase; HET: PLP; 2.10A {Corynebacterium glutamicum}
Probab=49.55 E-value=16 Score=37.29 Aligned_cols=70 Identities=16% Similarity=0.140 Sum_probs=38.8
Q ss_pred CCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEE-----EEeC---C---hhhHHHHHHHHHHH
Q 006566 231 GRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFS-----MKAS---N---PVVMVQAYRLLVAE 299 (640)
Q Consensus 231 g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviS-----mKsS---n---~~~mV~AyRlL~~~ 299 (640)
...+.|=+|.| |+|+|-+|+. +.+.++.+.++. ++.+. +-+. + .....+..+.+++.
T Consensus 116 ~~~v~l~vdtG------~~R~G~~~~~----~~~~~~~~~~~~--~l~~~Gl~tH~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (361)
T 2dy3_A 116 HIRVSIKIDSG------LHRSGVDEQE----WEGVFSALAAAP--HIEVTGMFTHLACADEPENPETDRQIIAFRRALAL 183 (361)
T ss_dssp CEEEEEEBCCS------SCSSSBCHHH----HHHHHHHHHTCT--TEEEEEEECCCC--------CHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCC------CCCCCCCHHH----HHHHHHHHHhCC--CCCEEEEEecCCCcCCCCcHHHHHHHHHHHHHHHH
Confidence 45677778888 5799977753 445555555542 22211 1111 1 12234445556677
Q ss_pred HHHcCCCcc-eEEE
Q 006566 300 MYVHGWDYP-LHLG 312 (640)
Q Consensus 300 m~~~g~dyP-LHLG 312 (640)
+.+.|++.| +|+|
T Consensus 184 l~~~g~~~~~~~~g 197 (361)
T 2dy3_A 184 ARKHGLECPVNHVC 197 (361)
T ss_dssp HHHTTCCCCSCBCC
T ss_pred HHhcCCCCCeEEEe
Confidence 777787766 5765
No 399
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=49.49 E-value=48 Score=34.81 Aligned_cols=67 Identities=21% Similarity=0.178 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC-----------HHHHHHHHHHHHHhhcCCCCcceeeccCCC--HHHHHHHhhhc
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQG-----------KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECF 182 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~-----------~~~A~~l~~I~~~L~~~g~~iPLVADIHF~--~~~Al~Aa~~v 182 (640)
+.+..++++.+..+.|...+.+-+-. .++.+.++.||+. .|-+++|..|-|-. +.-|+..++.+
T Consensus 148 ~~e~~~~~a~~~~~~Gf~~~KlKvg~~~~~~~~~~~~~~d~~~v~avR~a---~g~~~~l~vDaN~~w~~~~A~~~~~~L 224 (392)
T 3v5c_A 148 AVALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEV---AGPAGKIMIDANNAYNLNLTKEVLAAL 224 (392)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEECCTTTTTSCHHHHHHHHHHHHHHHHHH---HCTTCCEEEECTTCCCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCccccccccHHHHHHHHHHHHHH---cCCCCcEEeeCCCCcCHHHHHHHHHhc
Confidence 45777889999999999999998754 4667777777763 37789999998855 55555666666
Q ss_pred Cce
Q 006566 183 DKI 185 (640)
Q Consensus 183 ~KV 185 (640)
+..
T Consensus 225 ~~~ 227 (392)
T 3v5c_A 225 SDV 227 (392)
T ss_dssp TTS
T ss_pred ccC
Confidence 654
No 400
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=49.44 E-value=30 Score=33.32 Aligned_cols=68 Identities=15% Similarity=0.158 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCCEEEEecCCH------HHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cCceeeCCCC
Q 006566 120 TVEEVMRIADQGADLVRITVQGK------READACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDKIRVNPGN 191 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~------~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~KVRINPGN 191 (640)
.++.++++.++|++.+=++-.+. ...+.+++|++. +++|+++.--. ++.-|..+++. ++.|=|.=..
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~-----~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~ 111 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-----TTLPIIASGGAGKMEHFLEAFLRGADKVSINTAA 111 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGG-----CCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHH
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHh-----CCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHH
Confidence 46788899999999998875432 234566666663 78999998554 47778888777 8888665443
Q ss_pred C
Q 006566 192 F 192 (640)
Q Consensus 192 ~ 192 (640)
+
T Consensus 112 l 112 (247)
T 3tdn_A 112 V 112 (247)
T ss_dssp H
T ss_pred h
Confidence 4
No 401
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=49.26 E-value=36 Score=35.17 Aligned_cols=77 Identities=17% Similarity=0.096 Sum_probs=58.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC----------HHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh--
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG----------KREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-- 181 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~----------~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-- 181 (640)
.+.+.+++-+++|.++|+|+|=++... .-..+.++.||+. +++|+++---+ ++..|.++++.
T Consensus 226 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~-----~~iPVi~~GgI~s~e~a~~~L~~G~ 300 (340)
T 3gr7_A 226 LTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRRE-----ADIPTGAVGLITSGWQAEEILQNGR 300 (340)
T ss_dssp CCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-----TTCCEEEESSCCCHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHH-----cCCcEEeeCCCCCHHHHHHHHHCCC
Confidence 457788999999999999999987421 1134567778875 67999997665 69999998886
Q ss_pred cCceeeCCCCCCchh
Q 006566 182 FDKIRVNPGNFADRR 196 (640)
Q Consensus 182 v~KVRINPGN~~d~~ 196 (640)
+|.|=|.=+.+.|++
T Consensus 301 aD~V~iGR~~lanPd 315 (340)
T 3gr7_A 301 ADLVFLGRELLRNPY 315 (340)
T ss_dssp CSEEEECHHHHHCTT
T ss_pred eeEEEecHHHHhCch
Confidence 888877666666654
No 402
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=48.85 E-value=31 Score=36.96 Aligned_cols=66 Identities=23% Similarity=0.343 Sum_probs=47.5
Q ss_pred HHHHHHHHHHcCCCEEEEecC-------------CHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cCc
Q 006566 120 TVEEVMRIADQGADLVRITVQ-------------GKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDK 184 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp-------------~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~K 184 (640)
+.++++++.++|+|.|-++.- +.....++..+.+.+. ++++|++||-=. ++.-+.+|+.. ++-
T Consensus 288 t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~--~~~ipvia~GGI~~~~di~kala~GAd~ 365 (494)
T 1vrd_A 288 TPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVAR--KYDVPIIADGGIRYSGDIVKALAAGAES 365 (494)
T ss_dssp SHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHH--TTTCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHh--hcCCCEEEECCcCCHHHHHHHHHcCCCE
Confidence 355678999999999998431 1235667777776543 468999998766 67777788777 777
Q ss_pred eee
Q 006566 185 IRV 187 (640)
Q Consensus 185 VRI 187 (640)
|=+
T Consensus 366 V~i 368 (494)
T 1vrd_A 366 VMV 368 (494)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 403
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=48.79 E-value=1.1e+02 Score=29.78 Aligned_cols=141 Identities=16% Similarity=0.204 Sum_probs=82.4
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcC--CCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC--HHH----HHHHh
Q 006566 108 TMTTNDTKDVAGTVEEVMRIADQG--ADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PSV----ALRVA 179 (640)
Q Consensus 108 SMt~t~T~Dv~atv~Qi~rl~~aG--ceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~--~~~----Al~Aa 179 (640)
|+..-|..|.+..++-+.+ +| ++.+-+-.+=. .+.-. .+.+.|++. ..+++.|.||- |+- +..++
T Consensus 7 lilalD~~~l~~~~~~v~~---~~~~v~~~Kv~~d~~-~~~G~-~~v~~lr~~--~~~v~lD~kl~Dip~t~~~~~~~~~ 79 (246)
T 2yyu_A 7 FIVALDFPSKQEVERFLRP---FAGTPLFVKVGMELY-YQEGP-AIVAFLKEQ--GHAVFLDLKLHDIPNTVKQAMKGLA 79 (246)
T ss_dssp EEEECCCSSHHHHHHHHGG---GTTSCCEEEECHHHH-HHHTH-HHHHHHHHT--TCEEEEEEEECSCHHHHHHHHHHHH
T ss_pred eEEEeCCCCHHHHHHHHHH---hcccccEEEeCHHHH-HHhCH-HHHHHHHHC--CCeEEEEeecccchHHHHHHHHHHH
Confidence 5556677777765554444 45 36644443333 11111 233345554 46788999998 553 33555
Q ss_pred hh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHH---cC--CeEEEeeCC-CCCcHhHH-HHh
Q 006566 180 EC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKK---YG--RAVRIGTNH-GSLSDRIM-SYY 251 (640)
Q Consensus 180 ~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke---~g--~aIRIGvNh-GSLs~ril-~ry 251 (640)
++ +|-|=++|- +... -+.++++.+|+ +| .+-=|++|- =|++..-+ ..|
T Consensus 80 ~~Gad~vTvH~~--~g~~----------------------~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts~~~~~l~~~~ 135 (246)
T 2yyu_A 80 RVGADLVNVHAA--GGRR----------------------MMEAAIEGLDAGTPSGRMRPRCIAVTQLTSTDERMLHEEL 135 (246)
T ss_dssp HTTCSEEEEEGG--GCHH----------------------HHHHHHHHHHHHSCSSSCCCEEEEESSCTTCCHHHHHHTS
T ss_pred hcCCCEEEEECC--CCHH----------------------HHHHHHHHHHhhcccCCcCCCEEEEEeCCCCCHHHHHHHh
Confidence 66 788888772 2211 15678888888 77 343478884 35555666 777
Q ss_pred CCChHHHHHHHHHHHHHHHHCCCCcEEEE
Q 006566 252 GDSPRGMVESAFEFARICRKLDFHNFLFS 280 (640)
Q Consensus 252 Gdtp~gMVeSAle~~~i~e~~~F~diviS 280 (640)
|-+ ..+++..+...+...+.|+.-+|.|
T Consensus 136 ~~~-~~~~d~Vl~ma~~~~~~G~~g~V~~ 163 (246)
T 2yyu_A 136 WIS-RPLVETVAHYAALAKESGLDGVVCS 163 (246)
T ss_dssp CCC-SCHHHHHHHHHHHHHHHTCCEEECC
T ss_pred cCC-CCHHHHHHHHHHHHHHhCCCEEEeC
Confidence 631 1345555666666778898887655
No 404
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=48.47 E-value=24 Score=38.76 Aligned_cols=158 Identities=18% Similarity=0.201 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcC-CCCcceeeccCCCHHHHH---HHhhhcCceeeCCCCC
Q 006566 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQK-NYNIPLVADIHFAPSVAL---RVAECFDKIRVNPGNF 192 (640)
Q Consensus 117 v~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~-g~~iPLVADIHF~~~~Al---~Aa~~v~KVRINPGN~ 192 (640)
++.-.+-++...+.|+|.|-+. =.+.|+.+.++++.|.+. |.+++++|=|- ++..-. +-++.+|.|=|-||.+
T Consensus 171 tekD~~Di~~~l~~gvD~I~ls--fV~saeDv~~~~~~l~~~~~~~i~IiakIE-t~eav~nldeI~~~sDgImVargDL 247 (470)
T 1e0t_A 171 AEKDKQDLIFGCEQGVDFVAAS--FIRKRSDVIEIREHLKAHGGENIHIISKIE-NQEGLNNFDEILEASDGIMVARGDL 247 (470)
T ss_dssp CHHHHHHHHHHHHHTCSEEEES--SCCSHHHHHHHHHHHHTTTCTTCEEEEEEC-SHHHHHTHHHHHHHSSEEEEEHHHH
T ss_pred CcCCHHHHHHHHHcCCCEEEEC--CCCCHHHHHHHHHHHHHhcCCCceEEEEEC-CHHHHHhHHHHHHHCCEEEECchHh
Confidence 3556667788888899998655 445556666666667677 77899999883 333221 2223377777888877
Q ss_pred CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHH-
Q 006566 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRK- 271 (640)
Q Consensus 193 ~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~- 271 (640)
+-.-. .+++-...+.++.+|+++|+|.=+.| ==|+.= -+. ..|. =-|--+++.-
T Consensus 248 gveig---------------~e~v~~~qk~ii~~araaGkpvI~AT--QMLeSM--i~~-p~PT-----RAEvsDVanAV 302 (470)
T 1e0t_A 248 GVEIP---------------VEEVIFAQKMMIEKCIRARKVVITAT--MMLDSM--IKN-PRPT-----DAEAGDVANAI 302 (470)
T ss_dssp HHHSC---------------HHHHHHHHHHHHHHHHHHTCEEEEEC--C------------CCC-----HHHHHHHHHHH
T ss_pred hhhcC---------------HHHHHHHHHHHHHHHHHcCCCEEEec--hhhHhh--ccC-CCcc-----HHHHhhhhHhh
Confidence 64221 13355556789999999999973333 112110 000 1110 0133344433
Q ss_pred -CCCCcEEEE---EEeCChhhHHHHHHHHHHHHHH
Q 006566 272 -LDFHNFLFS---MKASNPVVMVQAYRLLVAEMYV 302 (640)
Q Consensus 272 -~~F~diviS---mKsSn~~~mV~AyRlL~~~m~~ 302 (640)
-|-+-+.+| .+-.-|...|+.....+.+.++
T Consensus 303 ~dG~DavMLSgETA~G~yPveaV~~m~~I~~~~E~ 337 (470)
T 1e0t_A 303 LDGTDAVMLSGESAKGKYPLEAVSIMATICERTDR 337 (470)
T ss_dssp HHTCSEEEECCC------CHHHHHHHHHHHHHHHT
T ss_pred hcCccEEEecccccCCCCHHHHHHHHHHHHHHHHh
Confidence 477888887 4556678888888888888765
No 405
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=48.31 E-value=75 Score=32.70 Aligned_cols=139 Identities=13% Similarity=0.096 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhh------hcCceeeC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE------CFDKIRVN 188 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~------~v~KVRIN 188 (640)
.|+....+++.++.++|.-+-.|-+|-.+.++.+..+.+.|...+-++++++=| =+|...+.+-+ -++.++|-
T Consensus 111 ~~t~~~~~Dl~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~I-ET~~gv~~~~eIa~a~~~v~~l~~G 189 (316)
T 3qll_A 111 LDTRAGIEDIHALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGII-ESVRGLNAVESIAAATPKLAGLIFG 189 (316)
T ss_dssp TTSHHHHHHHHHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEE-CSHHHHHTHHHHHTSCTTEEEEEEC
T ss_pred CCCchhHHHHHHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEE-cCHHHHHHHHHHHhcCCCceEEEEC
Confidence 355667778888999997344567788888888888877776555467777654 34544443222 25567777
Q ss_pred CCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHH
Q 006566 189 PGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARI 268 (640)
Q Consensus 189 PGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i 268 (640)
|..|...-. ..-+++ ++. .....+|..|+.+|++. |+.=++-+.+ ++|+- +.++.
T Consensus 190 ~~DL~~~lG----~~~~~~----~l~---~ar~~iv~AaraaGi~~-id~v~~~~~D---------~~gl~----~e~~~ 244 (316)
T 3qll_A 190 AADMAADIG----AASTWE----PLA---LARARLVSACAMNGIPA-IDAPFFDVHD---------VSGLQ----SETLR 244 (316)
T ss_dssp HHHHHHHHT----CCSSHH----HHH---HHHHHHHHHHHHHTCCE-EECCCSCSSC---------HHHHH----HHHHH
T ss_pred HHHHHHHhC----CCCCcH----HHH---HHHHHHHHHHHHcCCce-eeccccCcCC---------HHHHH----HHHHH
Confidence 766543211 111222 232 34557899999999998 8876666643 45554 46677
Q ss_pred HHHCCCC-cEEE
Q 006566 269 CRKLDFH-NFLF 279 (640)
Q Consensus 269 ~e~~~F~-divi 279 (640)
.+.+||. ..+|
T Consensus 245 ~r~lGf~Gk~~I 256 (316)
T 3qll_A 245 ASDFGFSAKAAI 256 (316)
T ss_dssp HHHHTCCEEEES
T ss_pred HHHCCCCeEEee
Confidence 8899997 5444
No 406
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=48.26 E-value=82 Score=31.40 Aligned_cols=134 Identities=11% Similarity=0.084 Sum_probs=82.2
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhh-----hcCceeeCCCCCCc
Q 006566 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE-----CFDKIRVNPGNFAD 194 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~-----~v~KVRINPGN~~d 194 (640)
..+++..+.+ |.+-| -+|-.+.++.+..+++.|...|.++++++=| =+|.....+-+ .++.+.|-|+.+..
T Consensus 83 ~~~dl~~~l~-g~~~i--~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~I-Et~~av~~~~eIa~~~~vd~l~iG~~DL~~ 158 (284)
T 1sgj_A 83 FEDDLSVLTP-ELSGV--VVPKLEMGAEARQVAQMLQERSLPLPILAGL-ETGAGVWNAREIMEVPEVAWAYFGAEDYTT 158 (284)
T ss_dssp HHHHGGGCCT-TSSEE--EECSCCSHHHHHHHHHHHHHTTCCCCEEEEE-CSHHHHHTHHHHHTSTTEEEEEECHHHHHH
T ss_pred HHHHHHHHhc-cCCEE--EeCCCCCHHHHHHHHHHHHhcCCCeEEEEEe-cCHHHHHHHHHHHcCCCCcEEEECHHHHHH
Confidence 5567777777 88865 4566666666666666665546678888877 56665543322 36677777766543
Q ss_pred hhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCC
Q 006566 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDF 274 (640)
Q Consensus 195 ~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F 274 (640)
.-. .. ..... ..+......++..|+.+|++. |+.=+|.+.+ ++|+-+ .++....+||
T Consensus 159 ~lg-~~-~~~~~-------~~~~~a~~~iv~aa~a~G~~~-i~~v~~~~~d---------~~~l~~----~~~~~~~~Gf 215 (284)
T 1sgj_A 159 DLG-GK-RTPGG-------LEVLYARSQVALAARLTGVAA-LDIVVTALND---------PETFRA----DAEQGRALGY 215 (284)
T ss_dssp HHT-CC-CCSSC-------GGGHHHHHHHHHHHHHHTCEE-EECCCCCCSC---------HHHHHH----HHHHHHHTTC
T ss_pred HhC-CC-CCCCh-------HHHHHHHHHHHHHHHHcCCCe-eeCCcCCCCC---------HHHHHH----HHHHHHhCCC
Confidence 111 00 01111 224445667899999999998 8665665532 345444 4566779999
Q ss_pred C-cEEEE
Q 006566 275 H-NFLFS 280 (640)
Q Consensus 275 ~-diviS 280 (640)
+ ..++.
T Consensus 216 ~Gk~~ih 222 (284)
T 1sgj_A 216 SGKLCIH 222 (284)
T ss_dssp SEEEESS
T ss_pred CcccccC
Confidence 8 66543
No 407
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=48.25 E-value=50 Score=30.93 Aligned_cols=61 Identities=15% Similarity=0.165 Sum_probs=38.5
Q ss_pred HHHHHHHHHHcCCCEEEEecCCH--HHH----HHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCceee
Q 006566 120 TVEEVMRIADQGADLVRITVQGK--REA----DACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKIRV 187 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~--~~A----~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KVRI 187 (640)
.+++++++.++|+++|=+..++. ++. +..+.+++... .+.+|++.+=+ . ..|.+. ++-|.+
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~--~~~v~v~v~~~--~---~~a~~~gad~v~l 100 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACR--EAGVPFIVNDD--V---ELALNLKADGIHI 100 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHH--HHTCCEEEESC--H---HHHHHHTCSEEEE
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHH--HcCCeEEEcCH--H---HHHHHcCCCEEEE
Confidence 78899999999999998886542 222 33333433222 36788887522 2 344455 777877
No 408
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=48.21 E-value=24 Score=36.13 Aligned_cols=62 Identities=18% Similarity=0.138 Sum_probs=43.7
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCce
Q 006566 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKI 185 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KV 185 (640)
++|+.+..++|+|+||+-..+.+ .++++++.++...-++|++|---.++.-+.+-++. +|-|
T Consensus 207 lee~~~A~~aGaD~I~ld~~~~~---~l~~~v~~l~~~~~~~~I~ASGGIt~~ni~~~~~aGaD~i 269 (299)
T 2jbm_A 207 LQEAVQAAEAGADLVLLDNFKPE---ELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVI 269 (299)
T ss_dssp HHHHHHHHHTTCSEEEEESCCHH---HHHHHHHHHHHHCTTSEEEEESSCCTTTHHHHCCTTCCEE
T ss_pred HHHHHHHHHcCCCEEEECCCCHH---HHHHHHHHhhccCCCeeEEEECCCCHHHHHHHHHCCCCEE
Confidence 46777777899999999998864 45555555554334589999877787766666665 6544
No 409
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=48.16 E-value=33 Score=35.32 Aligned_cols=65 Identities=17% Similarity=0.256 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCc
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDK 184 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~K 184 (640)
.|.+..++++.++.++|...+.+-+.-.++.+.++.|++.+ -+++|..|.| |++.- ...++.+++
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v~avr~a~----~~~~l~vDan~~~~~~~-~~~~~~l~~ 213 (375)
T 1r0m_A 147 ADEQATVDLVRRHVEQGYRRIKLKIKPGWDVQPVRATREAF----PDIRLTVDANSAYTLAD-AGRLRQLDE 213 (375)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHHHHHHHHC----TTSCEEEECTTCCCGGG-HHHHHTTGG
T ss_pred CCHHHHHHHHHHHHHhcccEEEEecChHHHHHHHHHHHHHc----CCCeEEEeCCCCCCHHH-HHHHHHHHh
Confidence 37888999999999999999998774345778888898864 3689999987 44444 444444444
No 410
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=48.02 E-value=2e+02 Score=27.90 Aligned_cols=129 Identities=10% Similarity=0.046 Sum_probs=67.6
Q ss_pred HHHHHHHHhhcCCCCcceeeccCCCHHHHHHHh----h-hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHH
Q 006566 147 ACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA----E-CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFS 221 (640)
Q Consensus 147 ~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa----~-~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~ 221 (640)
-+..|.+.+.+.||.+ ++.+.+.++......+ . .+|.|=+.|....+ .
T Consensus 81 ~~~gi~~~a~~~g~~~-~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~--------------------------~ 133 (338)
T 3dbi_A 81 LLFHAARMAEEKGRQL-LLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSV--------------------------D 133 (338)
T ss_dssp HHHHHHHHHHHTTCEE-EEEECTTSHHHHHHHHHHHHHTTCSEEEECCSSSCH--------------------------H
T ss_pred HHHHHHHHHHHCCCEE-EEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCCh--------------------------H
Confidence 3444444455555543 3444555544322222 2 37777777765432 2
Q ss_pred HHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHH
Q 006566 222 PLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMY 301 (640)
Q Consensus 222 ~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~ 301 (640)
++.+.+++.++|+ |-+|...-+.. ....+.........|.++ +.+.|+.+|.+-.-..+.....+-++-+.+.|.
T Consensus 134 ~~~~~~~~~~iPv-V~~~~~~~~~~-~~~V~~D~~~~~~~a~~~---L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~ 208 (338)
T 3dbi_A 134 EIDDIIDAHSQPI-MVLNRRLRKNS-SHSVWCDHKQTSFNAVAE---LINAGHQEIAFLTGSMDSPTSIERLAGYKDALA 208 (338)
T ss_dssp HHHHHHHHCSSCE-EEESSCCSSSG-GGEECBCHHHHHHHHHHH---HHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCE-EEEcCCCCCCC-CCEEEEChHHHHHHHHHH---HHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHH
Confidence 3567788889885 34444322222 223342333444445444 456799999886544343333333444667777
Q ss_pred HcCCCc
Q 006566 302 VHGWDY 307 (640)
Q Consensus 302 ~~g~dy 307 (640)
+.|+++
T Consensus 209 ~~g~~~ 214 (338)
T 3dbi_A 209 QHGIAL 214 (338)
T ss_dssp HTTCCC
T ss_pred HCCCCC
Confidence 777654
No 411
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=47.95 E-value=22 Score=37.29 Aligned_cols=66 Identities=18% Similarity=0.269 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 117 VAGTVEEVMRIADQGADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 117 v~atv~Qi~rl~~aGceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.+..++++.++.+.|...+.+-+- -.++.+.++.||+. -|-++||..|.| |++.-|...++.+++.
T Consensus 156 ~e~~~~~a~~~~~~G~~~iKlK~g~~~~~d~~~v~avR~a---~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~ 225 (392)
T 3ddm_A 156 PENPEDVVARKAAEGYRAFKLKVGFDDARDVRNALHVREL---LGAATPLMADANQGWDLPRARQMAQRLGPA 225 (392)
T ss_dssp SSSHHHHHHHHHHHTCCCEEEECSSCHHHHHHHHHHHHHH---HCSSSCEEEECTTCCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCHHHHHHHHHHHHHh---cCCCceEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 567888999999999999999865 34567777777764 267899999988 5566666656656554
No 412
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=47.92 E-value=43 Score=34.30 Aligned_cols=61 Identities=18% Similarity=0.103 Sum_probs=44.5
Q ss_pred ceEEEeccCCC--CCCHHHHHHHHHHHHHcCCCEEEEec--CCHHHHHHHHHHHHHhhcCCCCcceeeccC
Q 006566 103 PIRVQTMTTND--TKDVAGTVEEVMRIADQGADLVRITV--QGKREADACFEIKNSLVQKNYNIPLVADIH 169 (640)
Q Consensus 103 PI~VQSMt~t~--T~Dv~atv~Qi~rl~~aGceiVRvtv--p~~~~A~~l~~I~~~L~~~g~~iPLVADIH 169 (640)
+.+||-=|... ....+.+++..+.+++||||.|=+-. |+.+++ ++|.+.+. -++|++|-.-
T Consensus 149 ~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~---~~i~~~~~---~~vP~i~n~~ 213 (290)
T 2hjp_A 149 DFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQKTPDEI---LAFVKSWP---GKVPLVLVPT 213 (290)
T ss_dssp TSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCCSSSHHH---HHHHHHCC---CSSCEEECGG
T ss_pred CcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCCCCCHHHH---HHHHHHcC---CCCCEEEecc
Confidence 57777666543 35689999999999999999998754 555665 56777632 1399998753
No 413
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=47.61 E-value=34 Score=35.89 Aligned_cols=64 Identities=17% Similarity=0.199 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC--CHHHHHHHhhhcCc
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDK 184 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF--~~~~Al~Aa~~v~K 184 (640)
+.+..++++.+..+.|...+.+-+...++.+.++.|++.+ -++.|..|-|- ++.-|.. ++.++.
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv~~~~d~~~v~avR~~~----~~~~l~vDaN~~~~~~~A~~-~~~l~~ 214 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKIAPGRDRAAIKAVRLRY----PDLAIAADANGSYRPEDAPV-LRQLDA 214 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECBTTBSHHHHHHHHHHC----TTSEEEEECTTCCCGGGHHH-HHHGGG
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHHC----CCCeEEEECCCCCChHHHHH-HHHHhh
Confidence 4899999999999999999999886667889999999874 24899999774 4555554 444554
No 414
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=47.54 E-value=51 Score=32.53 Aligned_cols=82 Identities=15% Similarity=0.235 Sum_probs=50.7
Q ss_pred CCceEEEeccCCCCCCHHHHHHHHHHHHH-cCCCEEEEecCCH----------HHHHHHHHHHHHhhcCCCCcceee---
Q 006566 101 EHPIRVQTMTTNDTKDVAGTVEEVMRIAD-QGADLVRITVQGK----------READACFEIKNSLVQKNYNIPLVA--- 166 (640)
Q Consensus 101 ~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~-aGceiVRvtvp~~----------~~A~~l~~I~~~L~~~g~~iPLVA--- 166 (640)
+.|+.+|=+.. +.+...+-++++.+ +|+|.|-|.+-+. .+.+.+.++.+.+++. +++|++.
T Consensus 98 ~~p~~v~l~~~----~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~-~~~pv~vk~~ 172 (311)
T 1ep3_A 98 ELPIIANVAGS----EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV-SKVPLYVKLS 172 (311)
T ss_dssp TSCEEEEECCS----SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH-CSSCEEEEEC
T ss_pred CCcEEEEEcCC----CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh-cCCCEEEEEC
Confidence 45666666543 46666666677777 9999998865321 1223334444444432 4688887
Q ss_pred -ccCCCHHHHHHHhhh-cCceee
Q 006566 167 -DIHFAPSVALRVAEC-FDKIRV 187 (640)
Q Consensus 167 -DIHF~~~~Al~Aa~~-v~KVRI 187 (640)
++.=-..+|..+.++ ++-|=+
T Consensus 173 ~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 173 PNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp SCSSCSHHHHHHHHHTTCSEEEE
T ss_pred CChHHHHHHHHHHHHcCCCEEEE
Confidence 654335667777777 888876
No 415
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=47.53 E-value=36 Score=34.90 Aligned_cols=66 Identities=15% Similarity=0.276 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
.+.+..++++.++.++|...+.+-+.-.++.+.++.|++.+ -+++|..|.| |++.- ...++.+++.
T Consensus 140 ~~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v~avr~a~----~~~~l~vDan~~~~~~~-~~~~~~l~~~ 207 (369)
T 2zc8_A 140 PSVEDTLRVVERHLEEGYRRIKLKIKPGWDYEVLKAVREAF----PEATLTADANSAYSLAN-LAQLKRLDEL 207 (369)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHHHHHHHHC----TTSCEEEECTTCCCGGG-HHHHHGGGGG
T ss_pred CCHHHHHHHHHHHHHhhhheeeeecChhHHHHHHHHHHHHc----CCCeEEEecCCCCCHHH-HHHHHHHHhC
Confidence 37888999999999999999998763345778888898864 3689999987 55544 4444445543
No 416
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=47.29 E-value=17 Score=37.51 Aligned_cols=59 Identities=15% Similarity=0.356 Sum_probs=41.1
Q ss_pred ceEEEeccCCC-CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeecc
Q 006566 103 PIRVQTMTTND-TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168 (640)
Q Consensus 103 PI~VQSMt~t~-T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADI 168 (640)
+..|+-=|.+- ..+++.+++..+..++||+|.|=+- +.++.+-++.+.+. +++||++.+
T Consensus 155 ~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~--~~~~~ee~~~~~~~-----~~~Pl~~n~ 214 (298)
T 3eoo_A 155 TFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPE--AMKTLDDYRRFKEA-----VKVPILANL 214 (298)
T ss_dssp TSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEEC--CCCSHHHHHHHHHH-----HCSCBEEEC
T ss_pred CeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEeC--CCCCHHHHHHHHHH-----cCCCeEEEe
Confidence 44444333322 2468899999999999999999664 44566677778876 458887754
No 417
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=47.20 E-value=39 Score=35.95 Aligned_cols=84 Identities=19% Similarity=0.364 Sum_probs=56.1
Q ss_pred cCCCC--ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEec--CCHH------------------------------
Q 006566 98 IGSEH--PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITV--QGKR------------------------------ 143 (640)
Q Consensus 98 IGG~~--PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtv--p~~~------------------------------ 143 (640)
+||.. .|++=..+ ...|.+..++++.+..+.|...+.+-+ ++.+
T Consensus 131 LGG~~r~~v~~y~~~--~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (426)
T 4e4f_A 131 LGGASRTGVMVYCHT--TGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTE 208 (426)
T ss_dssp HTCCSSSSEEEEEEE--CCSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHH
T ss_pred cCCCCCCceeEeEeC--CCCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchh
Confidence 57653 45554322 336789999999999999999999875 2110
Q ss_pred -----HHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCcee
Q 006566 144 -----EADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIR 186 (640)
Q Consensus 144 -----~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KVR 186 (640)
+.+.++.||+. -|-++||..|.| |++.-|+..++.+++..
T Consensus 209 ~~~~~~~e~v~avR~a---~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~ 255 (426)
T 4e4f_A 209 KYLDFTPKLFEAVRDK---FGFNEHLLHDMHHRLTPIEAARFGKSVEDYR 255 (426)
T ss_dssp HHHHHHHHHHHHHHHH---HTTSSEEEEECTTCSCHHHHHHHHHHTGGGC
T ss_pred HHHHHHHHHHHHHHHH---hCCCCEEEEECCCCCCHHHHHHHHHHHhhcC
Confidence 23556666664 366899999988 55666666666666543
No 418
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=47.18 E-value=1.1e+02 Score=28.81 Aligned_cols=91 Identities=12% Similarity=0.096 Sum_probs=50.8
Q ss_pred EEEecCCHHHHHHHHHHHHHhhcCCCCcceeecc-CCCHHHHH-HHhhhc-CceeeCCC----CCCchhhhccccccchH
Q 006566 135 VRITVQGKREADACFEIKNSLVQKNYNIPLVADI-HFAPSVAL-RVAECF-DKIRVNPG----NFADRRAQFEQLEYTDD 207 (640)
Q Consensus 135 VRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADI-HF~~~~Al-~Aa~~v-~KVRINPG----N~~d~~k~F~~~eYtde 207 (640)
||+.+|...-.+.++.+++. |+++=|..+- |+++...+ ...+.. ..+-+..+ |+.+. |+
T Consensus 3 ~~~~~p~~~l~~~l~~~~~~----G~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~~----------~~ 68 (254)
T 3ayv_A 3 VRLAFPLSRAEEALPRLQAL----GLGAEVYLDPALLEEDALFQSLRRRFSGKLSVHLPFWNLDLLSP----------DP 68 (254)
T ss_dssp EEEEEEGGGHHHHHHHHHHH----TCEEEEECCGGGTTCHHHHHHHHHHCCSCEEEECCCTTCCTTCS----------SH
T ss_pred ccccCCHHHHHHHHHHHHhc----CCCEEEeccccccCcHHHHHHHHHHhCCCeEEecCccCCCCCCC----------CH
Confidence 57788888777888888775 8875443332 45553212 222223 23433322 33321 22
Q ss_pred HHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCC
Q 006566 208 EYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (640)
Q Consensus 208 eY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSL 243 (640)
+..++..+.++..++.|++.|.+. |-+..|..
T Consensus 69 ---~~r~~~~~~~~~~i~~A~~lGa~~-v~~~~g~~ 100 (254)
T 3ayv_A 69 ---EVRGLTLRRLLFGLDRAAELGADR-AVFHSGIP 100 (254)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHTTCSE-EEEECCCC
T ss_pred ---HHHHHHHHHHHHHHHHHHHhCCCE-EEECCCCC
Confidence 123344456788999999999873 44444554
No 419
>2plj_A Lysine/ornithine decarboxylase; type IV decarboxylase, beta/alpha barrel, beta barrel, lyase; HET: P3T; 1.70A {Vibrio vulnificus} PDB: 2plk_A*
Probab=46.97 E-value=33 Score=36.13 Aligned_cols=150 Identities=11% Similarity=0.139 Sum_probs=73.7
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCc-ceeeccC-CCHHHHHHHhhh-cCceeeCCCCCCchh
Q 006566 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNI-PLVADIH-FAPSVALRVAEC-FDKIRVNPGNFADRR 196 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~i-PLVADIH-F~~~~Al~Aa~~-v~KVRINPGN~~d~~ 196 (640)
+.+=++.|.++| ..+.|-+..||..+.+ .|++- +++---. +.+.-...|+++ +. +++ +-+
T Consensus 90 ~~~v~~~l~~~G---~g~~vas~~E~~~~r~-------~G~~~~~Il~~g~~k~~~~l~~a~~~~v~--~~~---vds-- 152 (419)
T 2plj_A 90 HPVVVRTLLAEG---ASFDLATTGEVELVAS-------EGVPADLTIHTHPIKRDADIRDALAYGCN--VFV---VDN-- 152 (419)
T ss_dssp CHHHHHHHHHHT---CEEEECSHHHHHHHHH-------TTCCGGGEEECCSSCCHHHHHHHHHHTCC--EEE---ECS--
T ss_pred CHHHHHHHHHcC---CcEEEeCHHHHHHHHH-------cCCChhhEEEeCCCCCHHHHHHHHHCCCC--EEE---eCC--
Confidence 344455677889 3899999999987663 37764 3443222 234444455554 22 122 211
Q ss_pred hhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCC-CCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCC
Q 006566 197 AQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNH-GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFH 275 (640)
Q Consensus 197 k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNh-GSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~ 275 (640)
.+|+++|.+. |++..+.+||-+.. |+- -..|+|+|-+++. +.+.++.+.+.+..
T Consensus 153 -------------~~el~~l~~~-------a~~~~v~lrvd~g~~~~~-~~~~~RfG~~~~e----~~~~~~~~~~~~l~ 207 (419)
T 2plj_A 153 -------------LNELEKFKAY-------RDDVELLVRLSFRNSEAF-ADLSKKFGCSPEQ----ALVIIETAKEWNIR 207 (419)
T ss_dssp -------------HHHHHTTGGG-------TTTCEEEEEBCC----------CCCSCBCHHH----HHHHHHHHHHTTCE
T ss_pred -------------HHHHHHHHHh-------cCCCCEEEEEcCCCCCCC-CCCCCCCcCCHHH----HHHHHHHHHhCCCc
Confidence 1245555542 23344555554431 111 1247899977743 44556666665543
Q ss_pred cEEEE--EEeC--ChhhH---HHHHHHHHHHHHHcCC-Ccc-eEE
Q 006566 276 NFLFS--MKAS--NPVVM---VQAYRLLVAEMYVHGW-DYP-LHL 311 (640)
Q Consensus 276 diviS--mKsS--n~~~m---V~AyRlL~~~m~~~g~-dyP-LHL 311 (640)
=.=|. +=+. ++... ++..+.+++++.+.|+ +.+ +|+
T Consensus 208 l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~l~~ 252 (419)
T 2plj_A 208 IKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDI 252 (419)
T ss_dssp EEEEECCCCTTCCCTHHHHHHHHHHHHHHHHHHHTTCCCCCEEEC
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 11121 1111 22222 3334445667777787 555 354
No 420
>2oo0_A ODC, ornithine decarboxylase; beta-alpha barrel, sheet, lyase; HET: PLP; 1.90A {Homo sapiens}
Probab=46.71 E-value=62 Score=34.76 Aligned_cols=147 Identities=14% Similarity=0.105 Sum_probs=0.0
Q ss_pred HHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC---CHHHHHHHhhh-cCceeeCCCCCCchhhhc
Q 006566 124 VMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF---APSVALRVAEC-FDKIRVNPGNFADRRAQF 199 (640)
Q Consensus 124 i~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF---~~~~Al~Aa~~-v~KVRINPGN~~d~~k~F 199 (640)
++.|.++| ..+.|-+..|++.+.+. |++-|.+- .|- .+.-...|+++ +. +++=.|+..
T Consensus 87 ~~~l~~~G---~g~dvaS~~E~~~~~~a-------G~~~~~iv-~~g~~k~~~ei~~a~~~gv~--~~~vds~~e----- 148 (471)
T 2oo0_A 87 VKTLAATG---TGFDCASKTEIQLVQSL-------GVPPERII-YANPCKQVSQIKYAANNGVQ--MMTFDSEVE----- 148 (471)
T ss_dssp HHHHHHHT---CEEEECSHHHHHHHHHT-------TCCGGGEE-ECCSSCCHHHHHHHHHTTCC--EEEECSHHH-----
T ss_pred HHHHHHcC---CcEEEeCHHHHHHHHHc-------CCChhhEE-EeCCCCCHHHHHHHHHCCCC--EEEECCHHH-----
Q ss_pred cccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEE
Q 006566 200 EQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLF 279 (640)
Q Consensus 200 ~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~divi 279 (640)
+..+.+.+++..+.+||=+....-.-..|+|+|-++ +.+.+.++.+.+.+.+=.=|
T Consensus 149 --------------------l~~l~~~~~~~~V~lRvn~g~~~~~~~~~~RfG~~~----~~~~~~~~~~~~~~l~l~Gl 204 (471)
T 2oo0_A 149 --------------------LMKVARAHPKAKLVLRIATDDSKAVCRLSVKFGATL----RTSRLLLERAKELNIDVVGV 204 (471)
T ss_dssp --------------------HHHHHHHCTTCEEEEEECCCCTTSSBCCTTTSCBCH----HHHHHHHHHHHHTTCEEEEE
T ss_pred --------------------HHHHHHhCCCCeEEEEEcCCCCCCCCCCCCCCCCCH----HHHHHHHHHHHhCCCcEEEE
Q ss_pred EE-------EeCChhhHHHHHHHHHHHHHHcCCCcce-EEE
Q 006566 280 SM-------KASNPVVMVQAYRLLVAEMYVHGWDYPL-HLG 312 (640)
Q Consensus 280 Sm-------KsSn~~~mV~AyRlL~~~m~~~g~dyPL-HLG 312 (640)
.. ........++..+.+++.+.+.|++.+. |+|
T Consensus 205 h~H~gs~~~~~~~~~~a~~~~~~~~~~~~~~G~~~~~ldiG 245 (471)
T 2oo0_A 205 SFHVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIG 245 (471)
T ss_dssp EECCCBSCCCTHHHHHHHHHHHHHHHHHHHHTCCCCEEECC
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEC
No 421
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=46.53 E-value=37 Score=35.46 Aligned_cols=67 Identities=15% Similarity=0.305 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
+.+...+++.++.+.|..-+.+-+-+ .++.+.++.|++. -|-+++|..|-| |++.-|+..++.+++.
T Consensus 164 ~~~~~~~~~~~~~~~G~~~~Kikvg~~~~~~d~~~v~avR~~---~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~ 235 (388)
T 4h83_A 164 PLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREA---AGDDFIICIDANQGYKPAVAVDLSRRIADL 235 (388)
T ss_dssp TTCSHHHHHHHHHHHTBSEEEEECSSSCHHHHHHHHHHHHHH---HCSSSEEEEECTTCBCHHHHHHHHHHTTTS
T ss_pred CHHHHHHHHHHHHHcCCceEeecCCCCCHHHHHHHHHHHHHh---cCCCeEEEEecCcCCCHHHHHHHHHHhhhc
Confidence 44567789999999999999998743 4567777777775 377899999988 5666677777766654
No 422
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=46.19 E-value=1.1e+02 Score=31.68 Aligned_cols=138 Identities=13% Similarity=0.258 Sum_probs=81.5
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC--HHHHH----HHhhh-cCc
Q 006566 112 NDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PSVAL----RVAEC-FDK 184 (640)
Q Consensus 112 t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~--~~~Al----~Aa~~-v~K 184 (640)
-|+.|.+.+++-+.++.+ .+..+-+-+|-... .- ..+.+.|++. ++.++++|.||. |+-.. .+++. ++-
T Consensus 31 LD~~~~~eal~l~~~l~~-~v~~vKVG~~lf~~-~G-~~~V~~Lk~~-~g~~IflDlKl~DIpnTv~~av~~~a~lGaD~ 106 (303)
T 3ru6_A 31 LDLSTKEECLQLAKELKN-LDIWLKVGLRAYLR-DG-FKFIEELKKV-DDFKIFLDLKFHDIPNTMADACEEVSKLGVDM 106 (303)
T ss_dssp CCCSSHHHHHHHHHHTTT-SSCEEEECHHHHHH-HT-HHHHHHHHHH-CCCEEEEEEEECSCHHHHHHHHHHHHTTTCSE
T ss_pred eCCCCHHHHHHHHHHhCC-CccEEEeCHHHHHH-hC-HHHHHHHHHh-hCCCEEEEeeeccCchhHHHHHHHHHhcCCCE
Confidence 455666666655555432 34556654333211 11 1233334443 368999999998 64433 33444 777
Q ss_pred eeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCC-eEEEee-CCCCCcHhHHHH-hCCChHHHHHH
Q 006566 185 IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR-AVRIGT-NHGSLSDRIMSY-YGDSPRGMVES 261 (640)
Q Consensus 185 VRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~-aIRIGv-NhGSLs~ril~r-yGdtp~gMVeS 261 (640)
|=++| ++..+ -++++++.+++++. +.=+|| ---|.|..-+.. +. ..+-+.
T Consensus 107 vTVHa--~~G~~----------------------~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~---~~~~e~ 159 (303)
T 3ru6_A 107 INIHA--SAGKI----------------------AIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYR---QKIEEA 159 (303)
T ss_dssp EEEEG--GGCHH----------------------HHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHS---SCHHHH
T ss_pred EEEec--cCCHH----------------------HHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHc---CCHHHH
Confidence 87877 33322 37888999988764 444675 334555443322 42 245677
Q ss_pred HHHHHHHHHHCCCCcEEEE
Q 006566 262 AFEFARICRKLDFHNFLFS 280 (640)
Q Consensus 262 Ale~~~i~e~~~F~diviS 280 (640)
+++.++.+.+.|.+-+|-|
T Consensus 160 V~~lA~~a~~~G~dGvV~s 178 (303)
T 3ru6_A 160 VINFSKISYENGLDGMVCS 178 (303)
T ss_dssp HHHHHHHHHHTTCSEEECC
T ss_pred HHHHHHHHHHcCCCEEEEC
Confidence 8899999999998776663
No 423
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=46.16 E-value=42 Score=32.04 Aligned_cols=90 Identities=13% Similarity=0.080 Sum_probs=57.2
Q ss_pred HHHHHHHHHHcCCCEEEEecCCH------HHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHHHHhhh-cCceeeCCCC
Q 006566 120 TVEEVMRIADQGADLVRITVQGK------READACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDKIRVNPGN 191 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~------~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al~Aa~~-v~KVRINPGN 191 (640)
+.+.++++.++|++.+=+|.-+. -+-+.++++++. .++|+||---.. +.=+..+.+. ++.|=+-=+=
T Consensus 154 ~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~-----~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal 228 (252)
T 1ka9_F 154 AVEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEA-----VGVPVIASGGAGRMEHFLEAFQAGAEAALAASVF 228 (252)
T ss_dssp HHHHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHH-----CSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHH-----cCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHH
Confidence 57778888899999888773221 135677777774 689999954333 4444445555 6666542221
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEE
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRI 236 (640)
+..+. .+.+..+.+++.|+++|.
T Consensus 229 ~~~~~----------------------~~~~~~~~l~~~~~~~~~ 251 (252)
T 1ka9_F 229 HFGEI----------------------PIPKLKRYLAEKGVHVRL 251 (252)
T ss_dssp HTTSS----------------------CHHHHHHHHHHTTCCBCC
T ss_pred HcCCC----------------------CHHHHHHHHHHCCCCcCC
Confidence 22111 266777888999998874
No 424
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=46.06 E-value=28 Score=35.11 Aligned_cols=62 Identities=21% Similarity=0.075 Sum_probs=43.2
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-cCce
Q 006566 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC-FDKI 185 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~-v~KV 185 (640)
++|+.+..++|+|+|++-..+.+ .++++++.++...-++|++|---.++.-+.+-++. +|-|
T Consensus 192 lee~~~A~~aGaD~I~ld~~~~~---~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~~~~~aGaD~i 254 (273)
T 2b7n_A 192 FEEAKNAMNAGADIVMCDNLSVL---ETKEIAAYRDAHYPFVLLEASGNISLESINAYAKSGVDAI 254 (273)
T ss_dssp HHHHHHHHHHTCSEEEEETCCHH---HHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHTTTCSEE
T ss_pred HHHHHHHHHcCCCEEEECCCCHH---HHHHHHHHhhccCCCcEEEEECCCCHHHHHHHHHcCCcEE
Confidence 36777777899999999988764 45555555554333489998877787666665555 6543
No 425
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=46.06 E-value=78 Score=32.67 Aligned_cols=90 Identities=14% Similarity=0.242 Sum_probs=62.6
Q ss_pred CceEEEe-ccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCH--------------HHHHHHHHHHHHhhcCCC-Cccee
Q 006566 102 HPIRVQT-MTTNDTKDVAGTVEEVMRIADQGADLVRITVQGK--------------READACFEIKNSLVQKNY-NIPLV 165 (640)
Q Consensus 102 ~PI~VQS-Mt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~--------------~~A~~l~~I~~~L~~~g~-~iPLV 165 (640)
-||.|-- +...+....+.+++-++++.++||+.|=|+.-+. -..+.++.|++. + ++|++
T Consensus 127 ~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~-----~~~iPVi 201 (350)
T 3b0p_A 127 VPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGD-----FPQLTFV 201 (350)
T ss_dssp SCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHH-----CTTSEEE
T ss_pred CceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHh-----CCCCeEE
Confidence 4666632 3333334567888999999999999998775321 135567778775 5 79999
Q ss_pred eccCC-CHHHHHHHhhhcCceeeCCCCCCchh
Q 006566 166 ADIHF-APSVALRVAECFDKIRVNPGNFADRR 196 (640)
Q Consensus 166 ADIHF-~~~~Al~Aa~~v~KVRINPGN~~d~~ 196 (640)
|.-=. ++.-|.++++-+|.|=|-=+-+.+++
T Consensus 202 anGgI~s~eda~~~l~GaD~V~iGRa~l~~P~ 233 (350)
T 3b0p_A 202 TNGGIRSLEEALFHLKRVDGVMLGRAVYEDPF 233 (350)
T ss_dssp EESSCCSHHHHHHHHTTSSEEEECHHHHHCGG
T ss_pred EECCcCCHHHHHHHHhCCCEEEECHHHHhCcH
Confidence 98774 78888888876888877555555544
No 426
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=46.02 E-value=1e+02 Score=31.97 Aligned_cols=98 Identities=10% Similarity=0.199 Sum_probs=63.0
Q ss_pred HHHHHHHHHHc--CCCEEEEecC---CHHHHHHHHHHHHHhhcCCC-Ccceee-ccCCCHHHHHHHhhh-cCceee-C-C
Q 006566 120 TVEEVMRIADQ--GADLVRITVQ---GKREADACFEIKNSLVQKNY-NIPLVA-DIHFAPSVALRVAEC-FDKIRV-N-P 189 (640)
Q Consensus 120 tv~Qi~rl~~a--GceiVRvtvp---~~~~A~~l~~I~~~L~~~g~-~iPLVA-DIHF~~~~Al~Aa~~-v~KVRI-N-P 189 (640)
..+++..+.++ |++++=+.+. ...-.+.++.||+. + ++|+++ ++ .++.-|..|+++ +|-|-+ | |
T Consensus 119 ~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~-----~~~~~vi~g~v-~t~e~A~~a~~aGaD~I~v~~g~ 192 (351)
T 2c6q_A 119 DFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKR-----FPQHTIMAGNV-VTGEMVEELILSGADIIKVGIGP 192 (351)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHH-----CTTSEEEEEEE-CSHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHh-----cCCCeEEEEeC-CCHHHHHHHHHhCCCEEEECCCC
Confidence 35778888887 9999888643 23345667777774 4 689885 55 689999999999 999887 2 4
Q ss_pred CCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 190 GNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 190 GN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
|.+... +.+...-. ..-..+.++.+.|++.++|+
T Consensus 193 G~~~~~-r~~~g~~~----------p~~~~l~~v~~~~~~~~ipv 226 (351)
T 2c6q_A 193 GSVCTT-RKKTGVGY----------PQLSAVMECADAAHGLKGHI 226 (351)
T ss_dssp STTBCH-HHHHCBCC----------CHHHHHHHHHHHHHHTTCEE
T ss_pred CcCcCc-cccCCCCc----------cHHHHHHHHHHHHhhcCCcE
Confidence 443211 11111000 01223566777788888988
No 427
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=45.92 E-value=43 Score=34.35 Aligned_cols=59 Identities=10% Similarity=0.095 Sum_probs=41.9
Q ss_pred CceEEEeccCCC--CCCHHHHHHHHHHHHHcCCCEEEEe--cCCHHHHHHHHHHHHHhhcCCCCcceee
Q 006566 102 HPIRVQTMTTND--TKDVAGTVEEVMRIADQGADLVRIT--VQGKREADACFEIKNSLVQKNYNIPLVA 166 (640)
Q Consensus 102 ~PI~VQSMt~t~--T~Dv~atv~Qi~rl~~aGceiVRvt--vp~~~~A~~l~~I~~~L~~~g~~iPLVA 166 (640)
-+.+||-=|... ....+.+++..+.+++||||.|=+- +|+.++++. |.+.+. -++|+++
T Consensus 152 ~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~---i~~~~~---~~~P~i~ 214 (295)
T 1s2w_A 152 PDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEA---FMKAWN---NQGPVVI 214 (295)
T ss_dssp TTCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHH---HHHHHT---TCSCEEE
T ss_pred CCcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHH---HHHHcC---CCCCEEE
Confidence 346777666553 4568999999999999999999994 577777654 445432 2378753
No 428
>3gwq_A D-serine deaminase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; HET: MSE; 2.00A {Burkholderia xenovorans LB400}
Probab=45.90 E-value=80 Score=33.48 Aligned_cols=150 Identities=14% Similarity=0.090 Sum_probs=79.5
Q ss_pred HHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhhcCceeeCCCC-C---Cc
Q 006566 120 TVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGN-F---AD 194 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~v~KVRINPGN-~---~d 194 (640)
+.+=++.+.++||+ .++|-+..||+.+.+ .|++-++++ .|+ .|.-...+++.++ .||. + .|
T Consensus 83 ~~~va~~l~~~G~~--g~~vas~~Ea~~l~~-------~Gi~~ill~-~~~~~~~~~~~~~~l~~----~~~~~l~~~Vd 148 (426)
T 3gwq_A 83 APQLFRRQLETGAW--GITLATAHQVRAAYH-------GGVSRVLMA-NQLVGRRNMMMVAELLS----DPEFEFFCLVD 148 (426)
T ss_dssp CHHHHHHHHHTTCC--CEEESSHHHHHHHHH-------TTCCEEEEC-SCCCSHHHHHHHHHHTT----CTTCEEEEEEC
T ss_pred CHHHHHHHHHCCCC--eEEEeCHHHHHHHHH-------CCCCeEEEE-CCcCCHHHHHHHHHHhh----cCCccEEEEeC
Confidence 33334567788975 578999999987643 366433444 233 3444434444432 1321 1 23
Q ss_pred hhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEE--eeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHC
Q 006566 195 RRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI--GTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL 272 (640)
Q Consensus 195 ~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRI--GvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~ 272 (640)
..+ .+..+-+.|++.+.++|| =+|.| |+|.|-.|. +.+.+.++.+.++
T Consensus 149 s~~---------------------~l~~L~~~a~~~~~~~~V~l~VdtG------~~R~Gv~~~---~e~~~l~~~i~~~ 198 (426)
T 3gwq_A 149 SVE---------------------GVEQLGEFFKSVNKQLQVLLELGVP------GGRTGVRDA---AQRNAVLEAITRY 198 (426)
T ss_dssp CHH---------------------HHHHHHHHHHHTTCCEEEEEEECCT------TSSSSBCSH---HHHHHHHHHHHTS
T ss_pred CHH---------------------HHHHHHHHHHHCCCeeEEEEEeCCC------CCcCCCCCH---HHHHHHHHHHHcC
Confidence 222 245556667777776654 56777 568896542 3455666666654
Q ss_pred CCCcEEE----EEEeC--Chhh---HHHHHHHHHHHHHHcCC---Ccc-eEEEee
Q 006566 273 DFHNFLF----SMKAS--NPVV---MVQAYRLLVAEMYVHGW---DYP-LHLGVT 314 (640)
Q Consensus 273 ~F~divi----SmKsS--n~~~---mV~AyRlL~~~m~~~g~---dyP-LHLGVT 314 (640)
. .++.+ +.=++ ++.. ..+..+.+++++.+.|+ +.| ||.|-|
T Consensus 199 ~-~~l~l~Gl~th~g~~~~~~~~~~~~~~l~~l~~~L~~~g~~~~~~~~lS~G~S 252 (426)
T 3gwq_A 199 P-DTLKLAGVELYEGVLKEEHEVREFLQSAVAVTRELVEQERFARAPAVLSGAGS 252 (426)
T ss_dssp T-TTEEEEEEEECGGGCCSHHHHHHHHHHHHHHHHHHHHHTCCSSSSEEEEECCS
T ss_pred C-CCEEEEeEEEEccccCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEecCC
Confidence 3 02222 22222 2222 23444556677777775 444 477644
No 429
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=45.55 E-value=32 Score=37.63 Aligned_cols=66 Identities=17% Similarity=0.296 Sum_probs=44.7
Q ss_pred HHHHHHHHHHcCCCEEEEec-------------CCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cCc
Q 006566 120 TVEEVMRIADQGADLVRITV-------------QGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDK 184 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtv-------------p~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~K 184 (640)
+.++.++++++|+|.|.+-. -+.....++.++.+.++ .+.+|+|||--. ++.=+.+|+.. ++.
T Consensus 307 t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~--~~~iPVIa~GGI~~~~di~kala~GA~~ 384 (511)
T 3usb_A 307 TAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEAR--KHGIPVIADGGIKYSGDMVKALAAGAHV 384 (511)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHH--TTTCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred cHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHH--hCCCcEEEeCCCCCHHHHHHHHHhCchh
Confidence 56778889999999998721 11234556666655433 357999998665 56666667666 777
Q ss_pred eee
Q 006566 185 IRV 187 (640)
Q Consensus 185 VRI 187 (640)
|=+
T Consensus 385 V~v 387 (511)
T 3usb_A 385 VML 387 (511)
T ss_dssp EEE
T ss_pred hee
Confidence 755
No 430
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=45.43 E-value=6.3 Score=38.34 Aligned_cols=125 Identities=13% Similarity=0.152 Sum_probs=74.4
Q ss_pred eccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC--HHHH----HHHhhh
Q 006566 108 TMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PSVA----LRVAEC 181 (640)
Q Consensus 108 SMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~--~~~A----l~Aa~~ 181 (640)
-||..|..|.+.+.+=+.++.+. ..+-+-.+=.. .-. .+.+.|+++ ..|+++|.||. |+-. ..++++
T Consensus 12 ~~~~~D~~~~~~a~~i~~~~~~~--~~~Kvg~~l~~--~G~-~~v~~l~~~--~~~v~lD~K~~DI~nT~~~~v~~~~~~ 84 (213)
T 1vqt_A 12 HMTPVLSLDMEDPIRFIDENGSF--EVVKVGHNLAI--HGK-KIFDELAKR--NLKIILDLKFCDIPSTVERSIKSWDHP 84 (213)
T ss_dssp CCEEEEECCSSSHHHHHHHHCCC--SEEEECHHHHT--TCT-HHHHHHHTT--TCEEEEEEEECSCHHHHHHHHHHHCCT
T ss_pred CCCCCCCCCHHHHHHHHHHhCCC--CEEEECHHHHh--hCH-HHHHHHHHC--CCCEEEEeecccCchHHHHHHHHHHHC
Confidence 58888888888888888887554 33554433222 111 223335544 57999999984 5533 345566
Q ss_pred -cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCC-CCcHhHHHHhCCChHHHH
Q 006566 182 -FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHG-SLSDRIMSYYGDSPRGMV 259 (640)
Q Consensus 182 -v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhG-SLs~ril~ryGdtp~gMV 259 (640)
+|-|=++| +.|. + -++++++.|+ +.-+||.-= |++.. +.
T Consensus 85 GaD~vTvh~-~~G~-~----------------------~l~~~~~~~~----~~~~~V~~lts~~~~-l~---------- 125 (213)
T 1vqt_A 85 AIIGFTVHS-CAGY-E----------------------SVERALSATD----KHVFVVVKLTSMEGS-LE---------- 125 (213)
T ss_dssp TEEEEEEEG-GGCH-H----------------------HHHHHHHHCS----SEEEEECCCTTSCCC-HH----------
T ss_pred CCCEEEEec-cCCH-H----------------------HHHHHHHhcC----CCeEEEEEeCCCCHH-HH----------
Confidence 77787776 2222 1 1555666554 445676321 44333 22
Q ss_pred HHHHHHHHHHHHCCCCcEEEE
Q 006566 260 ESAFEFARICRKLDFHNFLFS 280 (640)
Q Consensus 260 eSAle~~~i~e~~~F~diviS 280 (640)
+.+.+.+++ .+.|++ +|.|
T Consensus 126 ~~v~~~a~~-~e~G~d-vV~~ 144 (213)
T 1vqt_A 126 DYMDRIEKL-NKLGCD-FVLP 144 (213)
T ss_dssp HHHHHHHHH-HHHTCE-EECC
T ss_pred HHHHHHHHH-hcCCCE-EEEc
Confidence 667777888 889988 6543
No 431
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=45.36 E-value=2.5e+02 Score=28.18 Aligned_cols=27 Identities=15% Similarity=0.203 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG 141 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~ 141 (640)
.+.+..+++++++.+.|+.-|-++-..
T Consensus 91 ls~eei~~~~~~~~~~G~~~i~l~gGe 117 (350)
T 3t7v_A 91 LTMEEIKETCKTLKGAGFHMVDLTMGE 117 (350)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeeCC
Confidence 578999999999999999999887544
No 432
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=45.29 E-value=10 Score=38.95 Aligned_cols=139 Identities=17% Similarity=0.264 Sum_probs=87.1
Q ss_pred ecCCCCceEEEeccC--CCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhc-----CCCCccee----
Q 006566 97 AIGSEHPIRVQTMTT--NDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQ-----KNYNIPLV---- 165 (640)
Q Consensus 97 ~IGG~~PI~VQSMt~--t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~-----~g~~iPLV---- 165 (640)
.|||++ +.|.+|.. .+.++.+.+-.++++|.+| |+|=..=.+.+. -+.++.+.+.. ..-.+.+.
T Consensus 61 ~I~Gd~-v~V~~lvp~g~dPH~yeptp~d~~~l~~A--Dlvv~nG~~lE~--wl~k~~~~~~~~~~v~~s~gi~~~~~~~ 135 (321)
T 1xvl_A 61 NVAGDK-LVVESITRIGAEIHGYEPTPSDIVKAQDA--DLILYNGMNLER--WFEQFLGNVKDVPSVVLTEGIEPIPIAD 135 (321)
T ss_dssp HHHTTT-SEEEESSCSSCCCSSCCCCHHHHHHHHTC--SEEEECCTTSST--THHHHHHTSSSCCEEETTTTCCCCBCCS
T ss_pred HHhCCc-eEEEEecCCCCCcccccCCHHHHHHHhcC--CEEEECCCChHH--HHHHHHHhcCCCcEEEccCCcccccccc
Confidence 367776 89999964 5789999999999999865 777555455552 55555554320 00012222
Q ss_pred ------ecc--CCCHHHHHHHhhh-cCc-eeeCCCCCCchhhhccccccc--hHHHHHHHhhhHhhHHHHHHHHHHcCCe
Q 006566 166 ------ADI--HFAPSVALRVAEC-FDK-IRVNPGNFADRRAQFEQLEYT--DDEYQKELQHIEEVFSPLVEKCKKYGRA 233 (640)
Q Consensus 166 ------ADI--HF~~~~Al~Aa~~-v~K-VRINPGN~~d~~k~F~~~eYt--deeY~~Ele~I~~~f~~lV~~~Ke~g~a 233 (640)
-|= .++|..|...++. .+. +.+.|.|=.. |. -+.|.++|+.+.+.++..+..++..++.
T Consensus 136 ~~~~~~~DPHvWldp~n~~~~a~~I~~~L~~~DP~~a~~---------Y~~Na~~~~~~L~~Ld~~~~~~l~~~~~~~r~ 206 (321)
T 1xvl_A 136 GPYTDKPNPHAWMSPRNALVYVENIRQAFVELDPDNAKY---------YNANAAVYSEQLKAIDRQLGADLEQVPANQRF 206 (321)
T ss_dssp SSSTTSBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHH---------HHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCE
T ss_pred cCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHHCcccHHH---------HHHHHHHHHHHHHHHHHHHHHHHhhCcccCCE
Confidence 132 3567777766665 333 2377765221 32 3569999999999998888877655555
Q ss_pred EEEeeCCCCCcHhHHHHhC
Q 006566 234 VRIGTNHGSLSDRIMSYYG 252 (640)
Q Consensus 234 IRIGvNhGSLs~ril~ryG 252 (640)
+ =|.|.++. -+.++||
T Consensus 207 ~--v~~H~af~-Yfa~~yG 222 (321)
T 1xvl_A 207 L--VSCEGAFS-YLARDYG 222 (321)
T ss_dssp E--EEEESTTH-HHHHHTT
T ss_pred E--EEECchHH-HHHHHCC
Confidence 4 67777763 3455555
No 433
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=45.24 E-value=29 Score=37.77 Aligned_cols=66 Identities=18% Similarity=0.240 Sum_probs=45.0
Q ss_pred HHHHHHHHHHcCCCEEEEe------cC-------CHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cCc
Q 006566 120 TVEEVMRIADQGADLVRIT------VQ-------GKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDK 184 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvt------vp-------~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~K 184 (640)
+.+++++++++|+|.|.+. .. +.-...++.++.+.+++ +++|+|||-=. ++.=+.+|+.. ++.
T Consensus 282 t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~--~~iPVIa~GGI~~~~di~kala~GAd~ 359 (496)
T 4fxs_A 282 TAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANE--YGIPVIADGGIRFSGDISKAIAAGASC 359 (496)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGG--GTCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred cHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhcc--CCCeEEEeCCCCCHHHHHHHHHcCCCe
Confidence 5578899999999999984 11 12356777777776543 56999997332 35555566665 776
Q ss_pred eee
Q 006566 185 IRV 187 (640)
Q Consensus 185 VRI 187 (640)
|=|
T Consensus 360 V~i 362 (496)
T 4fxs_A 360 VMV 362 (496)
T ss_dssp EEE
T ss_pred EEe
Confidence 665
No 434
>1bd0_A Alanine racemase; isomerase, pyridoxal phosphate, alanine phosphonate; HET: IN5; 1.60A {Geobacillus stearothermophilus} SCOP: b.49.2.2 c.1.6.1 PDB: 1sft_A* 2sfp_A* 1l6g_A* 1niu_A* 1l6f_A* 1xql_A* 1xqk_A* 1epv_A* 1ftx_A* 3uw6_A
Probab=45.24 E-value=50 Score=34.32 Aligned_cols=102 Identities=17% Similarity=0.108 Sum_probs=56.3
Q ss_pred HHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhcccccc
Q 006566 125 MRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEY 204 (640)
Q Consensus 125 ~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~eY 204 (640)
+.+.++||+ .+.|-+..||..+. +.|++-|++-=-|+.+.-...++++ .+.++ +-+ ..
T Consensus 52 ~~l~~~G~~--~f~vas~~Ea~~lr-------~aG~~~~Il~~g~~~~~~~~~~~~~--~i~~~---vds-~~------- 109 (388)
T 1bd0_A 52 RTALEAGAS--RLAVAFLDEALALR-------EKGIEAPILVLGASRPADAALAAQQ--RIALT---VFR-SD------- 109 (388)
T ss_dssp HHHHHHTCC--EEEESSHHHHHHHH-------HTTCCSCEEECSCCCGGGHHHHHHT--TEEEE---ECC-HH-------
T ss_pred HHHHHCCCC--EEEEeeHHHHHHHH-------hCCcCCCEEEECCCCHHHHHHHHHc--CCEEE---ECC-HH-------
Confidence 346688985 47888888888653 3467656542234555544455542 23322 211 11
Q ss_pred chHHHHHHHhhhHhhHHHHHHHHHHcCC--eEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHC
Q 006566 205 TDDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL 272 (640)
Q Consensus 205 tdeeY~~Ele~I~~~f~~lV~~~Ke~g~--aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~ 272 (640)
+ +..+-+.| +.+. .+.|=+|.| |+|+|-.|. +.+.+.++.+.++
T Consensus 110 -------~-------l~~l~~~a-~~~~~~~V~lkvdtG------m~R~G~~~~---~e~~~~~~~i~~~ 155 (388)
T 1bd0_A 110 -------W-------LEEASALY-SGPFPIHFHLKMDTG------MGRLGVKDE---EETKRIVALIERH 155 (388)
T ss_dssp -------H-------HHHHHHHC-CCSSCEEEEEEBCSS------SCSSSBCSH---HHHHHHHHHHHHS
T ss_pred -------H-------HHHHHHHh-ccCCCeEEEEEEcCC------CCcCCCCCH---HHHHHHHHHHHhC
Confidence 1 33344445 5554 566778888 478996542 3355566666554
No 435
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=45.02 E-value=82 Score=32.35 Aligned_cols=48 Identities=10% Similarity=0.181 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC-----CHHH-----HHHHHHHHHHhh-cC---CC-Cccee
Q 006566 118 AGTVEEVMRIADQGADLVRITVQ-----GKRE-----ADACFEIKNSLV-QK---NY-NIPLV 165 (640)
Q Consensus 118 ~atv~Qi~rl~~aGceiVRvtvp-----~~~~-----A~~l~~I~~~L~-~~---g~-~iPLV 165 (640)
+.+++-++..+++|++.|-+.-+ +.++ ...+++|.+.++ +. |. .+|++
T Consensus 197 ~~~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i 259 (367)
T 1r3s_A 197 DALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMI 259 (367)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEE
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeE
Confidence 44666777888999999998755 3333 234566677666 44 32 36664
No 436
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=44.85 E-value=1.9e+02 Score=29.45 Aligned_cols=74 Identities=14% Similarity=0.168 Sum_probs=53.5
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcC--CCEEEEec-C--CHHHHHHHHHHHHHhhcCCCC-cceeec-cCCCHHH
Q 006566 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQG--ADLVRITV-Q--GKREADACFEIKNSLVQKNYN-IPLVAD-IHFAPSV 174 (640)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aG--ceiVRvtv-p--~~~~A~~l~~I~~~L~~~g~~-iPLVAD-IHF~~~~ 174 (640)
.|+-+|-.. + +..+++++++.++| ++++=+.. . .....+.++.|++. ++ +|+++. | -++..
T Consensus 95 ~~v~v~~g~-----~-~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~-----~~~~~vi~G~v-~s~e~ 162 (336)
T 1ypf_A 95 LIASISVGV-----K-EDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH-----LPESFVIAGNV-GTPEA 162 (336)
T ss_dssp CCCEEEECC-----S-HHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH-----CTTSEEEEEEE-CSHHH
T ss_pred CeEEEeCCC-----C-HHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh-----CCCCEEEECCc-CCHHH
Confidence 377777322 1 34567899999999 99987764 1 23455677777775 54 777776 5 46899
Q ss_pred HHHHhhh-cCceee
Q 006566 175 ALRVAEC-FDKIRV 187 (640)
Q Consensus 175 Al~Aa~~-v~KVRI 187 (640)
|..|.++ +|.|-+
T Consensus 163 A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 163 VRELENAGADATKV 176 (336)
T ss_dssp HHHHHHHTCSEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 9999999 999998
No 437
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=44.81 E-value=27 Score=36.75 Aligned_cols=74 Identities=9% Similarity=0.043 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh--cCceeeCCCCCCc
Q 006566 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC--FDKIRVNPGNFAD 194 (640)
Q Consensus 117 v~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~--v~KVRINPGN~~d 194 (640)
.+.+++-+++|.++|++++=++..... .+.++.||+. +++|+|+---++|..|.++++. +|-|=+-=+.++|
T Consensus 249 ~~~~~~la~~l~~~Gvd~i~v~~~~~~-~~~~~~ik~~-----~~iPvi~~Ggit~e~a~~~l~~G~aD~V~iGR~~lad 322 (361)
T 3gka_A 249 AATFGHVARELGRRRIAFLFARESFGG-DAIGQQLKAA-----FGGPFIVNENFTLDSAQAALDAGQADAVAWGKLFIAN 322 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCST-TCCHHHHHHH-----HCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCC-HHHHHHHHHH-----cCCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhC
Confidence 566788899999999999999876521 2456778875 6789998877799999999886 7877765555555
Q ss_pred hh
Q 006566 195 RR 196 (640)
Q Consensus 195 ~~ 196 (640)
++
T Consensus 323 Pd 324 (361)
T 3gka_A 323 PD 324 (361)
T ss_dssp TT
T ss_pred cH
Confidence 44
No 438
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=44.61 E-value=62 Score=30.48 Aligned_cols=113 Identities=15% Similarity=0.132 Sum_probs=65.0
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEe---CChhhH-HHHHHH
Q 006566 220 FSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKA---SNPVVM-VQAYRL 295 (640)
Q Consensus 220 f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKs---Sn~~~m-V~AyRl 295 (640)
...+.+.++++|+.+- ++ |...+ +.+..+..++...+.+++|.++|-..+++.--. .....+ ++..+.
T Consensus 53 ~~~~~~~~~~~gl~~~-~~-~~~~~------~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~ 124 (272)
T 2q02_A 53 YNQVRNLAEKYGLEIV-TI-NAVYP------FNQLTEEVVKKTEGLLRDAQGVGARALVLCPLNDGTIVPPEVTVEAIKR 124 (272)
T ss_dssp HHHHHHHHHHTTCEEE-EE-EEETT------TTSCCHHHHHHHHHHHHHHHHHTCSEEEECCCCSSBCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEE-ec-hhhhc------cCCcHHHHHHHHHHHHHHHHHhCCCEEEEccCCCchhHHHHHHHHHHHH
Confidence 5667778889988762 22 21111 122124567888899999999999888874221 123455 888888
Q ss_pred HHHHHHHcCCCcceEEEeecCCCCCcceeehHHHHHHHhhhcCCcEEEeec
Q 006566 296 LVAEMYVHGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQDGLGDTIRVSL 346 (640)
Q Consensus 296 L~~~m~~~g~dyPLHLGVTEAG~gedGrIKSAiGIG~LL~DGIGDTIRVSL 346 (640)
+++...+.|+. |++ |.-..+...+.+.-.+-.| .+.+|+-+.+-+
T Consensus 125 l~~~a~~~gv~----l~~-E~~~~~~~~~~~~~~~~~l-~~~v~~~~g~~~ 169 (272)
T 2q02_A 125 LSDLFARYDIQ----GLV-EPLGFRVSSLRSAVWAQQL-IREAGSPFKVLL 169 (272)
T ss_dssp HHHHHHTTTCE----EEE-CCCCSTTCSCCCHHHHHHH-HHHHTCCCEEEE
T ss_pred HHHHHHHcCCE----EEE-EecCCCcccccCHHHHHHH-HHHhCcCeEEEE
Confidence 88887776754 333 1111122344555444444 455665444443
No 439
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=44.60 E-value=38 Score=35.25 Aligned_cols=64 Identities=19% Similarity=0.239 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcCCCEEEEec-CC------------HHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHHHHhhh-cCc
Q 006566 120 TVEEVMRIADQGADLVRITV-QG------------KREADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAEC-FDK 184 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtv-p~------------~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al~Aa~~-v~K 184 (640)
|+++.++++++|+|.|-++. ++ .-...+|.++.+...+ .++|+|||--.. +.-+.+|+.. ++.
T Consensus 171 t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~g~di~kAlalGA~~ 248 (351)
T 2c6q_A 171 TGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHG--LKGHIISDGGCSCPGDVAKAFGAGADF 248 (351)
T ss_dssp SHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHH--TTCEEEEESCCCSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhh--cCCcEEEeCCCCCHHHHHHHHHcCCCc
Confidence 57888999999999998864 21 2245677777765333 569999997665 7777788777 888
Q ss_pred e
Q 006566 185 I 185 (640)
Q Consensus 185 V 185 (640)
|
T Consensus 249 V 249 (351)
T 2c6q_A 249 V 249 (351)
T ss_dssp E
T ss_pred e
Confidence 7
No 440
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=44.57 E-value=2.1e+02 Score=27.06 Aligned_cols=136 Identities=8% Similarity=-0.001 Sum_probs=77.0
Q ss_pred HHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhh----h-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhh
Q 006566 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE----C-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEV 219 (640)
Q Consensus 145 A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~----~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~ 219 (640)
.+-+..|.+.+.+.|+++=++.+-+.++.-....++ . +|.|=+.|.+-..
T Consensus 20 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~------------------------- 74 (305)
T 3g1w_A 20 KRCLKGFEDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPVE------------------------- 74 (305)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTT-------------------------
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHHH-------------------------
Confidence 455566677777777777555677777654443332 3 8888888765321
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHC--CCCcEEEEEEeCChhhHHHHHHHHH
Q 006566 220 FSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL--DFHNFLFSMKASNPVVMVQAYRLLV 297 (640)
Q Consensus 220 f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~--~F~diviSmKsSn~~~mV~AyRlL~ 297 (640)
+.+.++.+++.|+|+ |-+|...-...-....+.........|.++ +-+. |..+|.+-.-..+ ....+-++-+.
T Consensus 75 ~~~~~~~~~~~~iPv-V~~~~~~~~~~~~~~V~~d~~~~g~~~~~~---l~~~~~g~~~i~~i~~~~~-~~~~~R~~gf~ 149 (305)
T 3g1w_A 75 LTDTINKAVDAGIPI-VLFDSGAPDSHAHSFLGTNNYNAGMNAAYK---MAELLDGEGEVAVITLPNQ-LNHQERTTGFK 149 (305)
T ss_dssp THHHHHHHHHTTCCE-EEESSCCTTSCCSCEEECCHHHHHHHHHHH---HHHHTTTCEEEEEEECTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCcE-EEECCCCCCCceeEEECcCHHHHHHHHHHH---HHHHhCCCcEEEEEeCCCc-ccHHHHHHHHH
Confidence 456788899999998 555543221111122232233444444443 3445 8888887653332 33333444466
Q ss_pred HHHHHcCCCcceE
Q 006566 298 AEMYVHGWDYPLH 310 (640)
Q Consensus 298 ~~m~~~g~dyPLH 310 (640)
+.|.+.|.++...
T Consensus 150 ~~l~~~~~~~~~~ 162 (305)
T 3g1w_A 150 ETLEAEFPAIEVI 162 (305)
T ss_dssp HHHHHHCTTEEEE
T ss_pred HHHHhhCCCCEEE
Confidence 6777777665443
No 441
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=44.53 E-value=1.9e+02 Score=28.60 Aligned_cols=27 Identities=15% Similarity=0.315 Sum_probs=23.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEec
Q 006566 113 DTKDVAGTVEEVMRIADQGADLVRITV 139 (640)
Q Consensus 113 ~T~Dv~atv~Qi~rl~~aGceiVRvtv 139 (640)
...+.+...+.++++.+.|++.+.+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~g~~~ik~~~ 188 (403)
T 3gnh_A 162 NSDSPDEARKAVRTLKKYGAQVIKICA 188 (403)
T ss_dssp CCCSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEee
Confidence 346778889999999999999999975
No 442
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=44.38 E-value=26 Score=36.98 Aligned_cols=75 Identities=11% Similarity=0.024 Sum_probs=56.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC-----HHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh--cCceee
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG-----KREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC--FDKIRV 187 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~-----~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~--v~KVRI 187 (640)
.+.+.+++-+++|+++|+++|=++..+ ... + ++.||+. +++|+++---|++.-|.++++. +|-|=|
T Consensus 263 ~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~-~-~~~ir~~-----~~iPvi~~G~it~~~a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 263 NPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD-V-VAWVRGS-----YSGVKISNLRYDFEEADQQIREGKVDAVAF 335 (379)
T ss_dssp CHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC-H-HHHHHTT-----CCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH-H-HHHHHHH-----CCCcEEEECCCCHHHHHHHHHcCCCeEEEe
Confidence 356778888999999999999998743 112 4 6777774 7899999877799999998886 787776
Q ss_pred CCCCCCchh
Q 006566 188 NPGNFADRR 196 (640)
Q Consensus 188 NPGN~~d~~ 196 (640)
-=+.+++++
T Consensus 336 gR~~l~~P~ 344 (379)
T 3aty_A 336 GAKFIANPD 344 (379)
T ss_dssp SHHHHHCTT
T ss_pred cHHHHhCcH
Confidence 555555543
No 443
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=44.10 E-value=2.3e+02 Score=29.58 Aligned_cols=38 Identities=11% Similarity=0.032 Sum_probs=24.4
Q ss_pred HHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCH
Q 006566 122 EEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAP 172 (640)
Q Consensus 122 ~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~ 172 (640)
+=++.+.++|| .+.|-+..|++.+.+ .|++-| +|||..
T Consensus 72 ~v~~~l~~~G~---g~~vas~~E~~~~~~-------~G~~~~---~i~~~g 109 (425)
T 2qgh_A 72 SILSLLAHLES---GADCVSIGEIQRALK-------AGIKPY---RIVFSG 109 (425)
T ss_dssp HHHHHHHHTTC---EEEESSHHHHHHHHH-------TTCCGG---GEEECC
T ss_pred HHHHHHHHcCC---eEEEeCHHHHHHHHH-------cCCChh---HEEEcC
Confidence 33445678997 677888888876553 366543 466743
No 444
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=43.73 E-value=37 Score=34.65 Aligned_cols=67 Identities=15% Similarity=0.101 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCce
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKI 185 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KV 185 (640)
+.+..++++.++.+.|...+.+-+-. .++.+.++.|++.+ |.+++|..|-| |++.-|+..++.+++.
T Consensus 116 ~~e~~~~~a~~~~~~G~~~~KiKvg~~~~~~d~~~v~avr~~~---g~~~~L~vDaN~~~~~~~A~~~~~~l~~~ 187 (332)
T 2ozt_A 116 SGQAALEQWQQSWQRGQTTFKWKVGVMSPEEEQAILKALLAAL---PPGAKLRLDANGSWDRATANRWFAWLDRH 187 (332)
T ss_dssp TGGGHHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHHHHHHHS---CTTCEEEEECTTCCCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCcEEEEEeCCCChHHHHHHHHHHHHHc---CCCCEEEEcccCCCCHHHHHHHHHHHHhh
Confidence 55778899999999999999998653 46777888888753 56699999987 5666666666666554
No 445
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=43.61 E-value=1.9e+02 Score=27.10 Aligned_cols=132 Identities=12% Similarity=-0.006 Sum_probs=65.8
Q ss_pred HHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhh----h-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhh
Q 006566 145 ADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAE----C-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEV 219 (640)
Q Consensus 145 A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~----~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~ 219 (640)
.+.+.-|.+.+.+.|+.+ ++.|...++......++ . +|.|=+.|.+...
T Consensus 18 ~~~~~gi~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~------------------------- 71 (290)
T 2fn9_A 18 VVLAETAKQRAEQLGYEA-TIFDSQNDTAKESAHFDAIIAAGYDAIIFNPTDADG------------------------- 71 (290)
T ss_dssp HHHHHHHHHHHHHTTCEE-EEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCTTT-------------------------
T ss_pred HHHHHHHHHHHHHcCCEE-EEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCChHH-------------------------
Confidence 455666677777778765 45666677654333222 2 7777777754321
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCcHhHHHH-hCCChHHHHHHHHHHHH-HHHHC--CCCc--EEEEEEeCChhhHHHHH
Q 006566 220 FSPLVEKCKKYGRAVRIGTNHGSLSDRIMSY-YGDSPRGMVESAFEFAR-ICRKL--DFHN--FLFSMKASNPVVMVQAY 293 (640)
Q Consensus 220 f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~r-yGdtp~gMVeSAle~~~-i~e~~--~F~d--iviSmKsSn~~~mV~Ay 293 (640)
+.+.++.+++.|+|+ |-+|...-+...... .+.......+.|.+++- .+-.. |+.+ |.+-.-..+.....+-+
T Consensus 72 ~~~~~~~~~~~~iPv-V~~~~~~~~~~~~~~~V~~D~~~~~~~~~~~L~~~~g~~~~G~r~i~i~~l~g~~~~~~~~~R~ 150 (290)
T 2fn9_A 72 SIANVKRAKEAGIPV-FCVDRGINARGLAVAQIYSDNYYGGVLAGEYFVKFLKEKYPDAKEIPYAELLGILSAQPTWDRS 150 (290)
T ss_dssp THHHHHHHHHTTCCE-EEESSCCSCSSSSSEEEEECHHHHHHHHHHHHHHHHHHHCSSCSCEEEEEEECCTTCHHHHHHH
T ss_pred HHHHHHHHHHCCCeE-EEEecCCCCCCceEEEEeCCHHHHHHHHHHHHHHHhcccCCcccceeEEEEEcCCCCchHHHHH
Confidence 345677888899997 555543221111122 33222334444545432 21111 7888 44322122222233333
Q ss_pred HHHHHHHHHc
Q 006566 294 RLLVAEMYVH 303 (640)
Q Consensus 294 RlL~~~m~~~ 303 (640)
+-+.+.|.+.
T Consensus 151 ~gf~~~l~~~ 160 (290)
T 2fn9_A 151 NGFHSVVDQY 160 (290)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHHhC
Confidence 3355555544
No 446
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=43.60 E-value=19 Score=36.99 Aligned_cols=67 Identities=16% Similarity=0.181 Sum_probs=47.3
Q ss_pred HHHHHHHHHHcCCCEEEEecCC-----H--H--------HHHHHHHHHHHhhcCCCCcceeec--cCCCHHHHHHHhhh-
Q 006566 120 TVEEVMRIADQGADLVRITVQG-----K--R--------EADACFEIKNSLVQKNYNIPLVAD--IHFAPSVALRVAEC- 181 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~-----~--~--------~A~~l~~I~~~L~~~g~~iPLVAD--IHF~~~~Al~Aa~~- 181 (640)
+++++++++++|+|.|-++.-+ . . ..+.+.+|++. .++|++|| |. ++.-+.+|+..
T Consensus 159 s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~-----~~ipVIa~GGI~-~g~Dv~kalalG 232 (336)
T 1ypf_A 159 TPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKA-----ASKPIIADGGIR-TNGDVAKSIRFG 232 (336)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHT-----CSSCEEEESCCC-STHHHHHHHHTT
T ss_pred CHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHH-----cCCcEEEeCCCC-CHHHHHHHHHcC
Confidence 4578999999999999984211 0 1 57788888885 48999995 44 46666677766
Q ss_pred cCceeeCCCCC
Q 006566 182 FDKIRVNPGNF 192 (640)
Q Consensus 182 v~KVRINPGN~ 192 (640)
++.|=|-=..+
T Consensus 233 AdaV~iGr~~l 243 (336)
T 1ypf_A 233 ATMVMIGSLFA 243 (336)
T ss_dssp CSEEEESGGGT
T ss_pred CCEEEeChhhh
Confidence 88776654444
No 447
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=43.32 E-value=48 Score=35.66 Aligned_cols=92 Identities=9% Similarity=0.133 Sum_probs=59.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHHHHhh--hcCceeeCCCCC
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAE--CFDKIRVNPGNF 192 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al~Aa~--~v~KVRINPGN~ 192 (640)
+++.+++-+++|++. .+.+===++ +-+.+..++++ +++|+.+|=+.. +.-+..+++ .++-|.+.|...
T Consensus 250 ~~~~Ai~~~~~L~~~-l~~iEeP~~---~~~~~~~l~~~-----~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~ 320 (445)
T 3vdg_A 250 TPQTSVKVAAGLEGV-LEYLEDPTP---GLDGMAEVAAQ-----APMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYW 320 (445)
T ss_dssp CHHHHHHHHHHTTTT-CSEEECCSS---SHHHHHHHHHH-----CSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHH
T ss_pred CHHHHHHHHHHHhhH-HHeeeCCCC---CHHHHHHHHhc-----CCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCccee
Confidence 345555555555544 333222222 45667777774 789999996643 444444444 488899999988
Q ss_pred CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 193 ~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
|.-.. ...+...|+++|+++=++.
T Consensus 321 GGite----------------------a~kia~lA~~~gv~v~~h~ 344 (445)
T 3vdg_A 321 GGLQR----------------------SRLLAGICDTFGLGLSMHS 344 (445)
T ss_dssp TSHHH----------------------HHHHHHHHHHHTCEEEECC
T ss_pred CCHHH----------------------HHHHHHHHHHcCCEEEEeC
Confidence 87332 6789999999999874443
No 448
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=43.32 E-value=33 Score=37.09 Aligned_cols=74 Identities=15% Similarity=0.261 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHcCCCEEEEec-C------------CHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cC
Q 006566 119 GTVEEVMRIADQGADLVRITV-Q------------GKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FD 183 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvtv-p------------~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~ 183 (640)
.+.+++++++++|+|.|-+.. + +.....++..+.+-.. .+++|++||-=. ++.-+.+|+.. ++
T Consensus 305 ~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~--~~~ipVia~GGI~~~~di~kala~GAd 382 (514)
T 1jcn_A 305 VTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYAR--RFGVPIIADGGIQTVGHVVKALALGAS 382 (514)
T ss_dssp CSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHG--GGTCCEEEESCCCSHHHHHHHHHTTCS
T ss_pred chHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHh--hCCCCEEEECCCCCHHHHHHHHHcCCC
Confidence 356789999999999999954 2 1113344444443221 367999998766 47777788777 88
Q ss_pred ceeeCCCCCCc
Q 006566 184 KIRVNPGNFAD 194 (640)
Q Consensus 184 KVRINPGN~~d 194 (640)
.|=+-=.-+++
T Consensus 383 ~V~iG~~~l~~ 393 (514)
T 1jcn_A 383 TVMMGSLLAAT 393 (514)
T ss_dssp EEEESTTTTTS
T ss_pred eeeECHHHHcC
Confidence 88765554544
No 449
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=43.13 E-value=82 Score=30.68 Aligned_cols=133 Identities=17% Similarity=0.190 Sum_probs=73.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC--HHH----HHHHhhh-cCc
Q 006566 112 NDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PSV----ALRVAEC-FDK 184 (640)
Q Consensus 112 t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~--~~~----Al~Aa~~-v~K 184 (640)
-|..|.+.+++-+.++.+ .++.+-+-.+-.. +.-. .+.+.|++. ...++++|.||- |+- +..+++. +|-
T Consensus 19 lD~~~~~~a~~~v~~~~~-~v~~~Kvg~~lf~-~~G~-~~v~~l~~~-~g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~ 94 (228)
T 3m47_A 19 MDLMNRDDALRVTGEVRE-YIDTVKIGYPLVL-SEGM-DIIAEFRKR-FGCRIIADFKVADIPETNEKICRATFKAGADA 94 (228)
T ss_dssp CCCCSHHHHHHHHHTTTT-TCSEEEEEHHHHH-HHCT-HHHHHHHHH-HCCEEEEEEEECSCHHHHHHHHHHHHHTTCSE
T ss_pred eCCCCHHHHHHHHHHcCC-cccEEEEcHHHHH-hcCH-HHHHHHHhc-CCCeEEEEEeecccHhHHHHHHHHHHhCCCCE
Confidence 456666655555544321 2577777443221 1111 222334441 246889999998 763 4445555 777
Q ss_pred eeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHH
Q 006566 185 IRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFE 264 (640)
Q Consensus 185 VRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle 264 (640)
|=++| ++..+ -+.++++.++++|..+=+ +++-|=..- . +. +-+-+.+
T Consensus 95 vtvh~--~~G~~----------------------~l~~~~~~~~~~g~~v~v-Lt~~s~~~~-~----~~---~~~~~~~ 141 (228)
T 3m47_A 95 IIVHG--FPGAD----------------------SVRACLNVAEEMGREVFL-LTEMSHPGA-E----MF---IQGAADE 141 (228)
T ss_dssp EEEES--TTCHH----------------------HHHHHHHHHHHHTCEEEE-ECCCCSGGG-G----TT---HHHHHHH
T ss_pred EEEec--cCCHH----------------------HHHHHHHHHHhcCCCeEE-EEeCCCccH-H----HH---HHHHHHH
Confidence 77776 33212 377888888888864311 222222110 0 01 1144567
Q ss_pred HHHHHHHCCCCcEEEEE
Q 006566 265 FARICRKLDFHNFLFSM 281 (640)
Q Consensus 265 ~~~i~e~~~F~diviSm 281 (640)
.++++.+.|+.-+|.|.
T Consensus 142 ~a~~a~~~G~~GvV~~a 158 (228)
T 3m47_A 142 IARMGVDLGVKNYVGPS 158 (228)
T ss_dssp HHHHHHHTTCCEEECCS
T ss_pred HHHHHHHhCCcEEEECC
Confidence 88899999998888764
No 450
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=43.05 E-value=37 Score=35.59 Aligned_cols=65 Identities=18% Similarity=0.283 Sum_probs=47.8
Q ss_pred HHHHHHHHHcCCCEEEEec-------------CCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cCce
Q 006566 121 VEEVMRIADQGADLVRITV-------------QGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDKI 185 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtv-------------p~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~KV 185 (640)
+++++++.++|+|.|-++. -+....+.+..+++.+. ..++|+|||-=. ++.-+.+|+.. ++-|
T Consensus 205 ~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~--~~~ipVia~GGI~~~~d~~~ala~GAd~V 282 (404)
T 1eep_A 205 KEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACN--NTNICIIADGGIRFSGDVVKAIAAGADSV 282 (404)
T ss_dssp HHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHT--TSSCEEEEESCCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHh--hcCceEEEECCCCCHHHHHHHHHcCCCHH
Confidence 5788999999999999931 12335677788876433 357999998665 47777788777 8877
Q ss_pred ee
Q 006566 186 RV 187 (640)
Q Consensus 186 RI 187 (640)
=|
T Consensus 283 ~i 284 (404)
T 1eep_A 283 MI 284 (404)
T ss_dssp EE
T ss_pred hh
Confidence 66
No 451
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=42.99 E-value=74 Score=33.84 Aligned_cols=151 Identities=13% Similarity=0.110 Sum_probs=0.0
Q ss_pred HHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC--CCHHHHHHHhhhcCcee-eCCCCCCchhhhcc
Q 006566 124 VMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH--FAPSVALRVAECFDKIR-VNPGNFADRRAQFE 200 (640)
Q Consensus 124 i~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH--F~~~~Al~Aa~~v~KVR-INPGN~~d~~k~F~ 200 (640)
++.|.++|| .+.|-+..|++.+.+. |++-+.|.=.. ..+.-...|+++ .|+ +|=.|+..
T Consensus 93 ~~~l~~~G~---g~dvaS~~E~~~~~~~-------G~~~~~I~~~g~~k~~~ei~~a~~~--gv~~~~vds~~e------ 154 (441)
T 3n2b_A 93 LNTLARLGS---GFDIVSVGELERVLAA-------GGDPSKVVFSGVGKTEAEMKRALQL--KIKCFNVESEPE------ 154 (441)
T ss_dssp HHHHHHTTC---EEEESSHHHHHHHHHT-------TCCGGGEEECCTTCCHHHHHHHHHT--TCSEEEECSHHH------
T ss_pred HHHHHHcCC---cEEEeCHHHHHHHHHc-------CCCcccEEEcCCCCCHHHHHHHHHC--CCCEEEEcCHHH------
Q ss_pred ccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEe--eCCCCCcH--------hHHHHhCCChHHHHHHHHHHHHHHH
Q 006566 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIG--TNHGSLSD--------RIMSYYGDSPRGMVESAFEFARICR 270 (640)
Q Consensus 201 ~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIG--vNhGSLs~--------ril~ryGdtp~gMVeSAle~~~i~e 270 (640)
+..+.+.|++.|...+|+ +|.|.-.. .-++|+|-+++. +..+++.++-+.
T Consensus 155 -------------------l~~l~~~a~~~~~~~~V~lRvn~~~~~~~~~~i~tG~~~sKfG~~~~~-~~~~~~~~~~~~ 214 (441)
T 3n2b_A 155 -------------------LQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDR-AAQVYRLAHSLP 214 (441)
T ss_dssp -------------------HHHHHHHHHHHTCCEEEEEEBCCCCCTTTCHHHHHHHHTSSSSBCGGG-HHHHHHHHHHCT
T ss_pred -------------------HHHHHHHHHhcCCCcEEEEEeccCCCcCCCcccccCCCCCcccCCHHH-HHHHHHHHhcCC
Q ss_pred HCCCCcEEEEEEeCC-----hhhHHHHHHHHHHHHHHcCCCcce-EEE
Q 006566 271 KLDFHNFLFSMKASN-----PVVMVQAYRLLVAEMYVHGWDYPL-HLG 312 (640)
Q Consensus 271 ~~~F~diviSmKsSn-----~~~mV~AyRlL~~~m~~~g~dyPL-HLG 312 (640)
.+.+.=+-+-+=|.. ....++..+.+++++.+.|++.+. ++|
T Consensus 215 ~l~l~Glh~H~gs~~~d~~~~~~a~~~~~~l~~~l~~~G~~l~~LdiG 262 (441)
T 3n2b_A 215 NLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVG 262 (441)
T ss_dssp TEEEEEEECCTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECC
T ss_pred CeEEEEEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEC
No 452
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=42.99 E-value=1.2e+02 Score=32.43 Aligned_cols=65 Identities=26% Similarity=0.436 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHcCCCEEEEecC-C--HHHHHHHHHHHHHhhcCCC-CcceeeccCCCHHHHHHHhhh-cCceeeC
Q 006566 119 GTVEEVMRIADQGADLVRITVQ-G--KREADACFEIKNSLVQKNY-NIPLVADIHFAPSVALRVAEC-FDKIRVN 188 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRvtvp-~--~~~A~~l~~I~~~L~~~g~-~iPLVADIHF~~~~Al~Aa~~-v~KVRIN 188 (640)
...+++.++.++|++.|=+.+- + ....+.++.|++. + ++|+++--=.++..|..+.++ +|-|-+.
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~-----~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD-----YPDLPVVAGNVATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH-----CTTSCEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred hHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH-----CCCceEEeCCcCCHHHHHHHHHcCCCEEEEc
Confidence 3567999999999999888442 2 3466778888875 4 588875433568888888888 9999983
No 453
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=42.57 E-value=1.5e+02 Score=32.85 Aligned_cols=143 Identities=17% Similarity=0.240 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHcCCCEEEE-ecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC----------HHHHHHHhhh--cCce
Q 006566 119 GTVEEVMRIADQGADLVRI-TVQGKREADACFEIKNSLVQKNYNIPLVADIHFA----------PSVALRVAEC--FDKI 185 (640)
Q Consensus 119 atv~Qi~rl~~aGceiVRv-tvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~----------~~~Al~Aa~~--v~KV 185 (640)
.--+|+..|.++|+|++=+ |.|+..||++.-..-++. ...+|++.=.-|+ +..|..+++. ++.|
T Consensus 127 ~~~~qi~~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~---~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~~~~~av 203 (566)
T 1q7z_A 127 NFRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREV---SRDVFLIAHMTFDEKGRSLTGTDPANFAITFDELDIDAL 203 (566)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHH---CSSSCEEEEECCCTTSCCTTSCCHHHHHHHHHTSSCSEE
T ss_pred HHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHh---CCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhhccCCCEE
Confidence 3457899999999999988 588999998766554431 2368998877774 3444444443 5566
Q ss_pred eeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHc-CCeEEEeeCCCCCc--HhHHHHhCCChHHHHHHH
Q 006566 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY-GRAVRIGTNHGSLS--DRIMSYYGDSPRGMVESA 262 (640)
Q Consensus 186 RINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~-g~aIRIGvNhGSLs--~ril~ryGdtp~gMVeSA 262 (640)
=+|=+ . +.+ .+.++++..++. ++|+=+=-|.|.-. +. ...|-.+|+.|.+.+
T Consensus 204 G~NC~-~-gp~----------------------~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~-~~~~~~~p~~~a~~~ 258 (566)
T 1q7z_A 204 GINCS-L-GPE----------------------EILPIFQELSQYTDKFLVVEPNAGKPIVENG-KTVYPLKPHDFAVHI 258 (566)
T ss_dssp EEESS-S-CHH----------------------HHHHHHHHHHHTCCSEEEEECCSSSCEEETT-EEECCCCHHHHHTTH
T ss_pred EEeCC-C-CHH----------------------HHHHHHHHHHhcCCCEEEEEcCCCCCcccCC-ccccCCCHHHHHHHH
Confidence 66654 1 112 256666666554 66765556887431 22 124655888887777
Q ss_pred HHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHH
Q 006566 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRL 295 (640)
Q Consensus 263 le~~~i~e~~~F~diviSmKsSn~~~mV~AyRl 295 (640)
.+|+ +.| =+++==+=-++|. .|++.+.
T Consensus 259 ~~~~----~~G-~~iiGGCCGTtP~-hI~aia~ 285 (566)
T 1q7z_A 259 DSYY----ELG-VNIFGGCCGTTPE-HVKLFRK 285 (566)
T ss_dssp HHHH----HTT-CSEECCCTTCCHH-HHHHHHH
T ss_pred HHHH----HcC-CcEEccccCCCHH-HHHHHHH
Confidence 7765 345 4444333334433 4555433
No 454
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=42.53 E-value=45 Score=35.87 Aligned_cols=92 Identities=11% Similarity=0.133 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCC
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNF 192 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~--~v~KVRINPGN~ 192 (640)
+.+.+++-+++|++. .+.+ -=|- .+-+.++++++ .+++|+.+|=+. ++.-+..+++ +++-|.+.|...
T Consensus 248 ~~~~Ai~~~~~L~~~-l~~i--EeP~-~d~~~~~~l~~-----~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~ 318 (445)
T 3va8_A 248 TVETSKWVAKELEGI-VEYL--EDPA-GEIEGMAAVAK-----EASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFW 318 (445)
T ss_dssp CHHHHHHHHHHTTTT-CSEE--ESCB-SHHHHHHHHHT-----TCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHH
T ss_pred CHHHHHHHHHHHhhh-cCeE--eecC-cCHHHHHHHHH-----cCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhc
Confidence 344555555555544 3332 2232 25566666666 488999999654 4554444444 488899999988
Q ss_pred CchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEee
Q 006566 193 ADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 193 ~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGv 238 (640)
|.-.. ...+...|+++|+++=++.
T Consensus 319 GGite----------------------a~kia~lA~~~gv~v~~h~ 342 (445)
T 3va8_A 319 GGLRK----------------------SQTLASICATWGLRLSMHS 342 (445)
T ss_dssp TSHHH----------------------HHHHHHHHHHHTCEEEECC
T ss_pred CCHHH----------------------HHHHHHHHHHcCCEEEEeC
Confidence 86332 6789999999999875544
No 455
>3btn_A Antizyme inhibitor 1; TIM-like A/B barrel domain and A sheet domain, structural genomics, israel structural proteomics center, ISPC; 2.05A {Mus musculus}
Probab=42.19 E-value=58 Score=34.61 Aligned_cols=150 Identities=12% Similarity=0.105 Sum_probs=0.0
Q ss_pred HHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcc--eeeccCCCHHHHHHHhhh-cCceeeCCCCCCchhhhcc
Q 006566 124 VMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIP--LVADIHFAPSVALRVAEC-FDKIRVNPGNFADRRAQFE 200 (640)
Q Consensus 124 i~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iP--LVADIHF~~~~Al~Aa~~-v~KVRINPGN~~d~~k~F~ 200 (640)
++.+.++| ..+.|-+..|++ .+++.|++-| +.+=-...+.-...|+++ +. +++=.|+..
T Consensus 77 ~~~l~~~G---~g~~vaS~~E~~-------~~~~aG~~~~~iv~~g~~k~~~ei~~a~~~gv~--~~~vds~~e------ 138 (448)
T 3btn_A 77 LEILAALG---TGFACSSKNEMA-------LVQELGVSPENIIFTSPCKQVSQIKYAAKVGVN--IMTCDNEIE------ 138 (448)
T ss_dssp HHHHHHHT---CEEEESSHHHHH-------HHHHTTCCGGGEEECCSSCCHHHHHHHHHHTCC--EEEECSHHH------
T ss_pred HHHHHHcC---CcEEEeCHHHHH-------HHHHcCCChhhEEEcCCCCCHHHHHHHHHcCCC--EEEeCCHHH------
Q ss_pred ccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEE
Q 006566 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFS 280 (640)
Q Consensus 201 ~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviS 280 (640)
+..+-+.++...+.+||=+..+.-.-..++|+|-+++... .+++.++-+ .+.+.=+-+-
T Consensus 139 -------------------l~~l~~~~~~~~v~lRin~g~~~~~~~~~~RfG~~~~~~~-~~~~~~~~~-~l~~~Gl~~H 197 (448)
T 3btn_A 139 -------------------LKKIARNHPNAKVLLHIATEDNIGGEDGNMKFGTTLKNCR-HLLECAKEL-DVQIIGVKFH 197 (448)
T ss_dssp -------------------HHHHHHHCTTCEEEEEBCCCC--------CCCCBCHHHHH-HHHHHHHHH-TCEEEEEECC
T ss_pred -------------------HHHHHHhCCCCeEEEEEecCCCccCCCCCCcCCCCHHHHH-HHHHHHHhC-CCCEEEEEEE
Q ss_pred EEeC--ChhhHHHHHH---HHHHHHHHcCCCcce-EEE
Q 006566 281 MKAS--NPVVMVQAYR---LLVAEMYVHGWDYPL-HLG 312 (640)
Q Consensus 281 mKsS--n~~~mV~AyR---lL~~~m~~~g~dyPL-HLG 312 (640)
+=|. |+....++.+ .+++.+.+.|++.+. |+|
T Consensus 198 ~gs~~~d~~~~~~~~~~~~~~~~~~~~~G~~~~~ldiG 235 (448)
T 3btn_A 198 VSSACKEYQVYVHALSDARCVFDMAGEFGFTMNMLDIG 235 (448)
T ss_dssp CCTTCCCTTHHHHHHHHHHHHHHHHHHTTCCCCEEECC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEeC
No 456
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=41.87 E-value=50 Score=30.72 Aligned_cols=152 Identities=14% Similarity=0.141 Sum_probs=0.0
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceee--------ccCC----CHH
Q 006566 106 VQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVA--------DIHF----APS 173 (640)
Q Consensus 106 VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVA--------DIHF----~~~ 173 (640)
.+-+......|.+.-.+++..+...++|-|=+...+....+.++.+++ ..+|+|. ++++ ++.
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~------~~iPvV~~~~~~~~~~~~~V~~d~~~ 106 (272)
T 3o74_A 33 YQLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPEDDSYRELQD------KGLPVIAIDRRLDPAHFCSVISDDRD 106 (272)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSSCCHHHHHHH------TTCCEEEESSCCCTTTCEEEEECHHH
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCccccHHHHHHHHH------cCCCEEEEccCCCccccCEEEEchHH
Q ss_pred HHHHHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCc--------
Q 006566 174 VALRVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLS-------- 244 (640)
Q Consensus 174 ~Al~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs-------- 244 (640)
.+..|+++ +++ ..++|+--... ......+++..-+.+.++++|++..+ +-.+..+
T Consensus 107 ~~~~a~~~L~~~---G~~~i~~i~~~------------~~~~~~~~R~~gf~~~l~~~~~~~~~-~~~~~~~~~~~~~~~ 170 (272)
T 3o74_A 107 ASRQLAASLLSS---APRSIALIGAR------------PELSVSQARAGGFDEALQGYTGEVRR-YQGEAFSRECGQRLM 170 (272)
T ss_dssp HHHHHHHHHHTT---CCSEEEEEEEC------------TTSHHHHHHHHHHHHHTTTCCSEEEE-EEESSSSHHHHHHHH
T ss_pred HHHHHHHHHHHC---CCcEEEEEecC------------CCCccHHHHHHHHHHHHHHcCCChhe-eecCCCCHHHHHHHH
Q ss_pred HhHHHHhCCChHHHH----HHHHHHHHHHHHCCC--CcEEE
Q 006566 245 DRIMSYYGDSPRGMV----ESAFEFARICRKLDF--HNFLF 279 (640)
Q Consensus 245 ~ril~ryGdtp~gMV----eSAle~~~i~e~~~F--~divi 279 (640)
.+++.++...|.+++ ..|+..++.|++.|+ .|+.|
T Consensus 171 ~~~l~~~~~~~~ai~~~~d~~a~g~~~al~~~g~vp~di~v 211 (272)
T 3o74_A 171 QQLIDDLGGLPDALVTTSYVLLQGVFDTLQARPVDSRQLQL 211 (272)
T ss_dssp HHHHHHHTSCCSEEEESSHHHHHHHHHHHHTSCGGGCCCEE
T ss_pred HHHHhcCCCCCcEEEEeCchHHHHHHHHHHHcCCCccceEE
No 457
>4a3q_A Alanine racemase 1; isomerase, PLP-dependent enzymes; HET: PLP; 2.15A {Staphylococcus aureus} PDB: 3oo2_A
Probab=41.73 E-value=40 Score=35.48 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=61.5
Q ss_pred HHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccccc
Q 006566 124 VMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLE 203 (640)
Q Consensus 124 i~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~~e 203 (640)
++.+.++||+ .++|-+.+||..| |+.|++.|++.=-|+.+.-+..++++ +|-| .+-+ ..
T Consensus 51 a~~l~~~G~~--~f~Va~~~Ea~~l-------r~aGi~~~ilvlg~~~~~~~~~~~~~----~i~~-~V~s-~~------ 109 (382)
T 4a3q_A 51 ARHLMENGAT--FFAVATLDEAIEL-------RMHGITAKILVLGVLPAKDIDKAIQH----RVAL-TVPS-KQ------ 109 (382)
T ss_dssp HHHHHHTTCC--EEEESSHHHHHHH-------HTTTCCSEEEECSCCCGGGHHHHHHT----TCBE-EECC-HH------
T ss_pred HHHHHHCCCC--EEEEeEHHHHHHH-------HhCCCCCCEEEEeCCCHHHHHHHHHc----CCEE-EECC-HH------
Confidence 4567889987 4788888888764 44588877654356666554455443 2222 1212 11
Q ss_pred cchHHHHHHHhhhHhhHHHHHHHHHHcCC-e--EEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHC
Q 006566 204 YTDDEYQKELQHIEEVFSPLVEKCKKYGR-A--VRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL 272 (640)
Q Consensus 204 YtdeeY~~Ele~I~~~f~~lV~~~Ke~g~-a--IRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~ 272 (640)
.+..+-+.|++.|. + +-|=+|.| |+|.|-.|+. .+.++++.+.++
T Consensus 110 ---------------~l~~l~~~a~~~~~~~~~V~lkvDtG------m~R~G~~~~e---~~~~~~~~i~~~ 157 (382)
T 4a3q_A 110 ---------------WLKEAIKNISGEQEKKLWLHIKLDTG------MGRLGIKDTN---TYQEVIEIIQQY 157 (382)
T ss_dssp ---------------HHHHHHHTCCTTCCSCEEEEEEBCSS------SSSSSBCCHH---HHHHHHHHHHHC
T ss_pred ---------------HHHHHHHHHHHcCCCceeEEEEECCC------CCcCCCChHH---HHHHHHHHHHhC
Confidence 14445556666666 4 44568888 5789976643 245555555554
No 458
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=41.65 E-value=61 Score=34.16 Aligned_cols=65 Identities=14% Similarity=0.217 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHHc-CCCEEEEecC--CHHHHHHHHHHHHHhhcCCCCcceeeccCC--CHHHHHHHhhhcCc
Q 006566 116 DVAGTVEEVMRIADQ-GADLVRITVQ--GKREADACFEIKNSLVQKNYNIPLVADIHF--APSVALRVAECFDK 184 (640)
Q Consensus 116 Dv~atv~Qi~rl~~a-GceiVRvtvp--~~~~A~~l~~I~~~L~~~g~~iPLVADIHF--~~~~Al~Aa~~v~K 184 (640)
+.+..++++++..+. |...+.+-+- -.++.+.++.|++.+ -+++|..|.|- ++.-|+..++.++.
T Consensus 168 ~~e~~~~~a~~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~----~~~~l~vDaN~~w~~~~A~~~~~~l~~ 237 (398)
T 4dye_A 168 LPKAMAEHAVRVVEEGGFDAVKLKGTTDCAGDVAILRAVREAL----PGVNLRVDPNAAWSVPDSVRAGIALEE 237 (398)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEECCSCHHHHHHHHHHHHHHC----TTSEEEEECTTCSCHHHHHHHHHHHGG
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhC----CCCeEEeeCCCCCCHHHHHHHHHHHhh
Confidence 358999999999999 9999999883 357788888888864 45899999874 45555555555554
No 459
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=41.61 E-value=27 Score=35.95 Aligned_cols=61 Identities=13% Similarity=0.234 Sum_probs=43.2
Q ss_pred CceEEEeccCCC-CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC
Q 006566 102 HPIRVQTMTTND-TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH 169 (640)
Q Consensus 102 ~PI~VQSMt~t~-T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH 169 (640)
-+.+||-=|... ..+++.+++..+++++||||.|=+-. ..+.+-+++|.+. .++|++|.+-
T Consensus 150 ~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~--~~~~~~~~~i~~~-----~~iP~~~N~~ 211 (295)
T 1xg4_A 150 PDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEA--ITELAMYRQFADA-----VQVPILANIT 211 (295)
T ss_dssp TTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEETT--CCSHHHHHHHHHH-----HCSCBEEECC
T ss_pred CCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeC--CCCHHHHHHHHHH-----cCCCEEEEec
Confidence 457777655432 34678999999999999999987743 3445556667775 5589987543
No 460
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=41.44 E-value=73 Score=32.89 Aligned_cols=63 Identities=10% Similarity=0.003 Sum_probs=38.3
Q ss_pred hhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCC----hHHHHHHHHHHHHHHHHCCCCcEEEEE
Q 006566 215 HIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDS----PRGMVESAFEFARICRKLDFHNFLFSM 281 (640)
Q Consensus 215 ~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdt----p~gMVeSAle~~~i~e~~~F~diviSm 281 (640)
+-.+.++..++.|++.|.. .|-+..|+-..+.. .+.. -+-++++--+.++++++.|+ ++.|.+
T Consensus 113 ~~i~~~~~~i~~A~~LGa~-~vvv~~G~~g~~~~--~~~~~~~~~~~~~e~L~~l~~~A~~~G~-~v~l~l 179 (394)
T 1xla_A 113 FALAKVLHNIDLAAEMGAE-TFVMWGGREGSEYD--GSKDLAAALDRMREGVDTAAGYIKDKGY-NLRIAL 179 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCS-EEEECCTTCEESSG--GGCCHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEE
T ss_pred HHHHHHHHHHHHHHHhCCC-EEEECCCCCccccc--cccCHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEE
Confidence 3345677899999999998 36676675411000 0011 14466777777788888886 344444
No 461
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=41.41 E-value=1.3e+02 Score=32.16 Aligned_cols=212 Identities=13% Similarity=0.209 Sum_probs=120.7
Q ss_pred eEEE-ceeecCCCCceEEEeccCCCCCC----HHHHHHHHHHHHHcCCCEEEE--e--------------cCCHHHHHHH
Q 006566 90 TVMV-GNVAIGSEHPIRVQTMTTNDTKD----VAGTVEEVMRIADQGADLVRI--T--------------VQGKREADAC 148 (640)
Q Consensus 90 ~V~V-G~v~IGG~~PI~VQSMt~t~T~D----v~atv~Qi~rl~~aGceiVRv--t--------------vp~~~~A~~l 148 (640)
.+++ |++.+ .|-|..-.||+....+ ++..++--.+.+. |+=+|=. | .-+.+..+.+
T Consensus 30 P~~i~g~~~l--kNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~-G~GLiIte~~~V~~~g~~~~~~~gi~~d~~i~~~ 106 (419)
T 3l5a_A 30 SIHLPNGIKI--SNRFVLSPMTVNASTKEGYITKADLAYAARRSN-SAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGL 106 (419)
T ss_dssp CEECTTSCEE--SSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTT-SCSEEEEEEEESSGGGCCSTTCEECSSGGGHHHH
T ss_pred CEEeCCCCEE--CCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhc-CCcEEEecceEeCcccccCCCccccccHHHHHHH
Confidence 4667 77766 6778887887654321 3444444444443 5555411 1 1245678889
Q ss_pred HHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhh-ccccccchHHHHHHHhhhHhhHHHHHHHH
Q 006566 149 FEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQ-FEQLEYTDDEYQKELQHIEEVFSPLVEKC 227 (640)
Q Consensus 149 ~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~-F~~~eYtdeeY~~Ele~I~~~f~~lV~~~ 227 (640)
+++.+...+.|.. +++=|+-.-+.|......- .-=+-|-.+...... -...+.|. +|++.|-+.|..=.+.|
T Consensus 107 k~l~~avh~~G~~--i~~QL~H~Gr~~~~~~~~~-~~~vapS~i~~~~~~~~~pr~mt~----~eI~~ii~~F~~AA~rA 179 (419)
T 3l5a_A 107 TNMASTMKQHGSL--AIIQLAHAGRFSNQAILNF-GKVYGPSPMTLHSPIEHVVIAMSH----EKINSIIQQYRDATLRA 179 (419)
T ss_dssp HHHHHHHHTTSCE--EEEEEECCGGGCHHHHHHH-SEEEESSCEEECSSSSEEEEECCH----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCE--EEEEeccCCCcccccccCC-CceeCCCCCccccCCCCCCccCCH----HHHHHHHHHHHHHHHHH
Confidence 9999888888864 4555554444333221100 001222222111000 01234554 46778888899889999
Q ss_pred HHcCCe-EEEeeCCCCCcHhHHH--------HhCCCh-HHHHHHHHHHHHHHHHC-C---CCcEEEEEEeCCh-------
Q 006566 228 KKYGRA-VRIGTNHGSLSDRIMS--------YYGDSP-RGMVESAFEFARICRKL-D---FHNFLFSMKASNP------- 286 (640)
Q Consensus 228 Ke~g~a-IRIGvNhGSLs~ril~--------ryGdtp-~gMVeSAle~~~i~e~~-~---F~diviSmKsSn~------- 286 (640)
++.|-- |=|=.-||-|=+.+++ +||.+. +.=..-++|-++-.++. + =.++.|++|-|-.
T Consensus 180 ~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~ 259 (419)
T 3l5a_A 180 IKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDL 259 (419)
T ss_dssp HHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEE
T ss_pred HHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCC
Confidence 998854 5555567766666655 377665 44444444444433331 1 2466888887631
Q ss_pred hhHHHHHHHHHHHHHH-cCCCcceEEE
Q 006566 287 VVMVQAYRLLVAEMYV-HGWDYPLHLG 312 (640)
Q Consensus 287 ~~mV~AyRlL~~~m~~-~g~dyPLHLG 312 (640)
-...+.+..++++|.+ .|++| ||+-
T Consensus 260 G~~~ed~~~la~~L~~~~Gvd~-I~vs 285 (419)
T 3l5a_A 260 GYTIDEFNQLIDWVMDVSNIQY-LAIA 285 (419)
T ss_dssp EECHHHHHHHHHHHHHHSCCCC-EEEC
T ss_pred CCCHHHHHHHHHHHHhhcCCcE-EEEe
Confidence 2246778889999999 99999 7763
No 462
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=41.27 E-value=32 Score=36.18 Aligned_cols=74 Identities=11% Similarity=0.104 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh--cCceeeCCCCCCc
Q 006566 117 VAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC--FDKIRVNPGNFAD 194 (640)
Q Consensus 117 v~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~--v~KVRINPGN~~d 194 (640)
.+.+++=+++|.++|+++|=++.++. ..+.++.||+. +++|+|+---++|..|.++++. +|-|=+-=+.++|
T Consensus 241 ~~~~~~la~~l~~~Gvd~i~v~~~~~-~~~~~~~ik~~-----~~iPvi~~Ggit~e~a~~~l~~g~aD~V~iGR~~lan 314 (362)
T 4ab4_A 241 AETFTYVARELGKRGIAFICSREREA-DDSIGPLIKEA-----FGGPYIVNERFDKASANAALASGKADAVAFGVPFIAN 314 (362)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCC-TTCCHHHHHHH-----HCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHHHHHHHHHHhCCCEEEECCCCC-CHHHHHHHHHH-----CCCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhC
Confidence 56678889999999999999987652 11456777775 6789988766699999998876 7777665555555
Q ss_pred hh
Q 006566 195 RR 196 (640)
Q Consensus 195 ~~ 196 (640)
++
T Consensus 315 Pd 316 (362)
T 4ab4_A 315 PD 316 (362)
T ss_dssp TT
T ss_pred cH
Confidence 43
No 463
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=41.20 E-value=34 Score=35.21 Aligned_cols=55 Identities=15% Similarity=0.258 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC
Q 006566 113 DTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH 169 (640)
Q Consensus 113 ~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH 169 (640)
...|.+.-++-.++=.+|||+. +-+|=.=+++.+.+..+++++.|+++|+++=|=
T Consensus 158 ~a~~~~~d~~~Lk~KvdAGAdf--~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GIm 212 (304)
T 3fst_A 158 EAKSAQADLLNLKRKVDAGANR--AITQFFFDVESYLRFRDRCVSAGIDVEIIPGIL 212 (304)
T ss_dssp TCSCHHHHHHHHHHHHHHTCCE--EEECCCSCHHHHHHHHHHHHHTTCCSCEECEEC
T ss_pred CCCCHHHHHHHHHHHHHcCCCE--EEeCccCCHHHHHHHHHHHHhcCCCCcEEEEec
Confidence 3467777777888888999997 778888888999999999999999999886553
No 464
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=41.17 E-value=27 Score=36.23 Aligned_cols=47 Identities=21% Similarity=0.316 Sum_probs=36.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeec
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVAD 167 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVAD 167 (640)
.+++.+++..+..++||+|.|=+ ++.++.+-+++|.+.+. ++|+++.
T Consensus 175 ~gldeAi~Ra~ay~eAGAD~ifi--~~~~~~~~~~~i~~~~~----~~Pv~~n 221 (307)
T 3lye_A 175 LGYEECIERLRAARDEGADVGLL--EGFRSKEQAAAAVAALA----PWPLLLN 221 (307)
T ss_dssp HCHHHHHHHHHHHHHTTCSEEEE--CCCSCHHHHHHHHHHHT----TSCBEEE
T ss_pred cCHHHHHHHHHHHHHCCCCEEEe--cCCCCHHHHHHHHHHcc----CCceeEE
Confidence 47899999999999999999955 45566667777888643 3787665
No 465
>3kw3_A Alanine racemase; niaid, ssgcid, seattle structural genomics center for infect disease, iodide SOAK, LLP, CAT-scratch DI isomerase; HET: LLP; 2.04A {Bartonella henselae}
Probab=41.11 E-value=44 Score=35.11 Aligned_cols=93 Identities=16% Similarity=0.100 Sum_probs=51.6
Q ss_pred HHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCC-CCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhhhccc
Q 006566 123 EVMRIADQGADLVRITVQGKREADACFEIKNSLVQKN-YNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQ 201 (640)
Q Consensus 123 Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g-~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k~F~~ 201 (640)
=++.+.++||+. ++|-+.+||..|.+ .| ++.|++-=-|+.++-+..++++ ++-| .+-+ ..
T Consensus 62 va~~l~~~G~~~--f~Va~~~Ea~~lr~-------ag~~~~~ilvl~~~~~~~~~~~~~~----~i~~-~V~s-~~---- 122 (376)
T 3kw3_A 62 IAPALYQAGCRT--FFVAQIEEALQLKA-------VLPENVMIALLNGFPHKAEEFVAQS----GIIP-LLNS-WS---- 122 (376)
T ss_dssp HHHHHHHTTCCE--EEESSHHHHHHHHH-------HSCSSCEEEETTCCCTTCHHHHHHT----TCEE-EECS-HH----
T ss_pred HHHHHHHcCCCE--EEEeEHHHHHHHHh-------cCCCCCCEEEEeCCCHHHHHHHHHC----CCEE-EECC-HH----
Confidence 346778899884 78888888876543 25 6656542223333333333332 1112 1211 11
Q ss_pred cccchHHHHHHHhhhHhhHHHHHHHHHHcCC--eEEEeeCCCCCcHhHHHHhCCChHH
Q 006566 202 LEYTDDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNHGSLSDRIMSYYGDSPRG 257 (640)
Q Consensus 202 ~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~--aIRIGvNhGSLs~ril~ryGdtp~g 257 (640)
.+..+-+.|++.|. .+-|=+|.| |+|.|-.|+.
T Consensus 123 -----------------~l~~l~~~a~~~~~~~~V~lkVdtG------m~R~G~~~~e 157 (376)
T 3kw3_A 123 -----------------TIEDWQTLCQKKNKKFPAIIQVDTN------MSRLGLDKKE 157 (376)
T ss_dssp -----------------HHHHHHHHHHHHTCCCEEEEEBCSS------CCSSSBCHHH
T ss_pred -----------------HHHHHHHHHHHcCCCeEEEEEECCC------CCcccCCHHH
Confidence 24445566666654 455678888 5789977753
No 466
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=41.02 E-value=47 Score=35.27 Aligned_cols=93 Identities=14% Similarity=0.105 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCC--cceeeccCC-CHHHHHHHhhh-cCceeeCCCC
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYN--IPLVADIHF-APSVALRVAEC-FDKIRVNPGN 191 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~--iPLVADIHF-~~~~Al~Aa~~-v~KVRINPGN 191 (640)
+.+.+++-+++|.+.+.+.+===+ ..++-+.+..++++ ++ +||++|=++ ++.-...+++. ++-|.|.|..
T Consensus 234 ~~~~Ai~~~~~l~~~~i~~iEqPl-~~~d~~~~~~l~~~-----~~~~ipIa~dE~~~~~~~~~~~i~~~~d~i~ik~~~ 307 (415)
T 2p3z_A 234 DVNYATKLAHACAPFNLKWIEECL-PPQQYEGYRELKRN-----APAGMMVTSGEHHGTLQSFRTLAETGIDIMQPDVGW 307 (415)
T ss_dssp CHHHHHHHHHHHGGGTCCEEECCS-CTTCHHHHHHHHHH-----SCTTCEEEECTTCCSHHHHHHHHHTTCSEECCCHHH
T ss_pred CHHHHHHHHHHHhhcCCceEeCCC-CcchHHHHHHHHHh-----cCCCCcEEcCCCCCCHHHHHHHHHcCCCEEEeCccc
Confidence 344444445555554433332111 12345566666664 44 899999665 45545555444 8889999988
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEE
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRI 236 (640)
+|.-.. ...+++.|+++|+++=+
T Consensus 308 ~GGite----------------------a~~ia~lA~~~gi~v~~ 330 (415)
T 2p3z_A 308 CGGLTT----------------------LVEIAALAKSRGQLVVP 330 (415)
T ss_dssp HTCHHH----------------------HHHHHHHHHHTTCCBCC
T ss_pred cCCHHH----------------------HHHHHHHHHHcCCEEEe
Confidence 877432 67899999999998744
No 467
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=40.98 E-value=69 Score=31.37 Aligned_cols=166 Identities=13% Similarity=0.154 Sum_probs=94.8
Q ss_pred ccCCCCCCHHHHHHHHHHHHHcC--CCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC--HH----HHHHHhh
Q 006566 109 MTTNDTKDVAGTVEEVMRIADQG--ADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PS----VALRVAE 180 (640)
Q Consensus 109 Mt~t~T~Dv~atv~Qi~rl~~aG--ceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~--~~----~Al~Aa~ 180 (640)
+..-|..+.+.++ ..+.++| ++++-+-++=. .+.-.. +.+.|++. ..++++|.||- |+ .+..+++
T Consensus 18 ilalD~~~l~~~~---~~~~~~~~~v~~~Kv~~d~~-~~~G~~-~v~~lr~~--~~~v~lD~kl~Dip~t~~~~i~~~~~ 90 (245)
T 1eix_A 18 VVALDYHNRDDAL---AFVDKIDPRDCRLKVGKEMF-TLFGPQ-FVRELQQR--GFDIFLDLKFHDIPNTAAHAVAAAAD 90 (245)
T ss_dssp EEEECCSSHHHHH---HHHTTSCTTTCEEEEEHHHH-HHHHHH-HHHHHHHT--TCCEEEEEEECSCHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHH---HHHHHhCccCcEEEEcHHHH-HHhCHH-HHHHHHHC--CCcEEEEeeccccHHHHHHHHHHHHh
Confidence 3444555655433 3344556 78855554434 222222 33345554 46788999997 55 4446667
Q ss_pred h-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCC--eEEEeeCC-CCCcHhHHHHhCCChH
Q 006566 181 C-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNH-GSLSDRIMSYYGDSPR 256 (640)
Q Consensus 181 ~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~--aIRIGvNh-GSLs~ril~ryGdtp~ 256 (640)
+ +|-|=++|- +... -+.++++.+|++|. +-=||++- =|.+..-+..+|-+ .
T Consensus 91 ~Gad~vTvH~~--~g~~----------------------~l~~~~~~~~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~-~ 145 (245)
T 1eix_A 91 LGVWMVNVHAS--GGAR----------------------MMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMT-L 145 (245)
T ss_dssp HTCSEEEEBGG--GCHH----------------------HHHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTCC-S
T ss_pred CCCCEEEEecc--CCHH----------------------HHHHHHHHHHHcCCCCCcEEEEEecCCCCHHHHHHhccC-C
Confidence 7 888888873 2211 26678889999886 42357763 24555667777621 1
Q ss_pred HHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEE--EeecCCCC
Q 006566 257 GMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHL--GVTEAGEG 319 (640)
Q Consensus 257 gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHL--GVTEAG~g 319 (640)
.+++..+...+...+.|+.-+|.|. .. ++..| +.. + +.++.+ ||...|..
T Consensus 146 ~~~d~Vl~ma~~~~~~G~~g~V~~~-----~e-i~~lr---~~~---~-~~~i~v~gGI~~~g~~ 197 (245)
T 1eix_A 146 SPADYAERLAALTQKCGLDGVVCSA-----QE-AVRFK---QVF---G-QEFKLVTPGIRPQGSE 197 (245)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEECCG-----GG-HHHHH---HHH---C-SSSEEEECCBCCTTCC
T ss_pred CHHHHHHHHHHHHHHcCCCeEEeCH-----HH-HHHHH---Hhc---C-CCCEEEECCcCCCCCC
Confidence 2455556666668889998877653 22 43333 332 2 346655 77766543
No 468
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A
Probab=40.60 E-value=58 Score=34.39 Aligned_cols=81 Identities=12% Similarity=0.060 Sum_probs=59.9
Q ss_pred HhhhHhhHHHHH--HHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCC--cEEEEEEeCChhh
Q 006566 213 LQHIEEVFSPLV--EKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFH--NFLFSMKASNPVV 288 (640)
Q Consensus 213 le~I~~~f~~lV--~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~--diviSmKsSn~~~ 288 (640)
++..-++|.+.. ++|+- ..|-+|-.+..++..+.++||+.|.+..+++++.|.. |++|-+-++. .
T Consensus 97 v~~a~D~l~v~~g~ei~~~---------v~G~VS~EV~~~ls~d~e~~i~eA~~l~~l~~~~gi~~~nv~IKIP~T~--e 165 (345)
T 3tkf_A 97 VKEIAIEILVSFGIKILDV---------IEGKVSSEVDARVSFNSATTIDYAKRIIARYESNGIPKDRVLIMIAATW--E 165 (345)
T ss_dssp HHHHHHHHHHHHHHHHHTT---------CSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSH--H
T ss_pred HHHHHHHHHHHHHHHHhcC---------CCCCEEEEEcCCccCCHHHHHHHHHHHHHHhhhcCCCCCcEEEEeCCCH--H
Confidence 455566676666 55543 2577777777777778899999999999999999996 8998888875 5
Q ss_pred HHHHHHHHHHHHHHcCCCcc
Q 006566 289 MVQAYRLLVAEMYVHGWDYP 308 (640)
Q Consensus 289 mV~AyRlL~~~m~~~g~dyP 308 (640)
-++|-+.|. ++|+..=
T Consensus 166 Gi~A~~~L~----~eGI~vN 181 (345)
T 3tkf_A 166 GIKAAKLLQ----KEGINCN 181 (345)
T ss_dssp HHHHHHHHH----HTTCCEE
T ss_pred HHHHHHHHH----HCCCcEE
Confidence 677776655 4576533
No 469
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=40.41 E-value=26 Score=35.92 Aligned_cols=54 Identities=13% Similarity=0.163 Sum_probs=45.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccC
Q 006566 114 TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIH 169 (640)
Q Consensus 114 T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIH 169 (640)
..|.+.-++.+++=.+|||| .+-+|=.=+++.+.+..+++++.|+++|+++=|=
T Consensus 156 ~~~~~~d~~~Lk~Kv~aGAd--f~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GIm 209 (310)
T 3apt_A 156 SESLEADLRHFKAKVEAGLD--FAITQLFFNNAHYFGFLERARRAGIGIPILPGIM 209 (310)
T ss_dssp SSCHHHHHHHHHHHHHHHCS--EEEECCCSCHHHHHHHHHHHHHTTCCSCEECEEC
T ss_pred CCCHHHHHHHHHHHHHcCCC--EEEecccCCHHHHHHHHHHHHHcCCCCeEEEEec
Confidence 45677778888888899999 5678888889999999999999999999987764
No 470
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=40.40 E-value=1.1e+02 Score=32.83 Aligned_cols=66 Identities=21% Similarity=0.269 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHHHc-CCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeeccCCC--HHHHHHHhhhcCc
Q 006566 115 KDVAGTVEEVMRIADQ-GADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADIHFA--PSVALRVAECFDK 184 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~a-GceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADIHF~--~~~Al~Aa~~v~K 184 (640)
.+.+..++++++..++ |...+.+-+-. .++.+.++.|++.+ -+++|..|-|-. +.-|+..++.++.
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~----~~~~L~vDaN~~w~~~~Ai~~~~~L~~ 261 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAF----PGVPLRLDPNAAWTVETSKWVAKELEG 261 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHS----TTCCEEEECTTCBCHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC----CCCcEeeeCCCCCCHHHHHHHHHHHhh
Confidence 6789999999999875 99999998744 67788889999875 358999998855 5555555555654
No 471
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=40.40 E-value=1.3e+02 Score=31.54 Aligned_cols=98 Identities=17% Similarity=0.252 Sum_probs=68.2
Q ss_pred HHHhhhHhhHHHHHHHHHHcCC-eEEEeeCCCCCcHhHHHH--------hCCChHHHHHHHHHHHHHHHH-CCCCcEEEE
Q 006566 211 KELQHIEEVFSPLVEKCKKYGR-AVRIGTNHGSLSDRIMSY--------YGDSPRGMVESAFEFARICRK-LDFHNFLFS 280 (640)
Q Consensus 211 ~Ele~I~~~f~~lV~~~Ke~g~-aIRIGvNhGSLs~ril~r--------yGdtp~gMVeSAle~~~i~e~-~~F~diviS 280 (640)
+|++.|.+.|..-.+.|++.|- .|-|=.-||-|=+.+|+- ||.+.+.=..-++|-++-+++ .| .+ .|+
T Consensus 146 ~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg-~~-~v~ 223 (362)
T 4ab4_A 146 EEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWG-AQ-RVG 223 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC-GG-GEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcC-CC-ceE
Confidence 4777888889999999999885 577777788777666654 676665555556666654443 34 23 466
Q ss_pred EEeCCh--------hhHHHHHHHHHHHHHHcCCCcceEE
Q 006566 281 MKASNP--------VVMVQAYRLLVAEMYVHGWDYPLHL 311 (640)
Q Consensus 281 mKsSn~--------~~mV~AyRlL~~~m~~~g~dyPLHL 311 (640)
+|-|-. ....+.+..|++.|++.|++| ||+
T Consensus 224 vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~-i~v 261 (362)
T 4ab4_A 224 VHLAPRADAHDMGDADRAETFTYVARELGKRGIAF-ICS 261 (362)
T ss_dssp EEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSE-EEE
T ss_pred EEeeccccccccCCCCcHHHHHHHHHHHHHhCCCE-EEE
Confidence 776521 123667888999999999998 665
No 472
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=40.34 E-value=31 Score=35.76 Aligned_cols=59 Identities=15% Similarity=0.236 Sum_probs=42.0
Q ss_pred ceEEEeccCCC-CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeecc
Q 006566 103 PIRVQTMTTND-TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADI 168 (640)
Q Consensus 103 PI~VQSMt~t~-T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADI 168 (640)
+..||-=|... ..+.+.+++..+.+++||||.|=+- +..+.+-+++|.+. +++|+++.+
T Consensus 159 ~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e--~~~~~~~~~~i~~~-----~~~P~~~n~ 218 (305)
T 3ih1_A 159 SLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPE--ALQSEEEFRLFNSK-----VNAPLLANM 218 (305)
T ss_dssp TSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEET--TCCSHHHHHHHHHH-----SCSCBEEEC
T ss_pred CeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEc--CCCCHHHHHHHHHH-----cCCCEEEee
Confidence 56777544432 2468999999999999999999773 23344556677775 668998764
No 473
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=40.32 E-value=1.5e+02 Score=31.44 Aligned_cols=101 Identities=19% Similarity=0.272 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCC-CcceeeccCCCHHHHHHHhhh-cCceeeC--CC
Q 006566 118 AGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNY-NIPLVADIHFAPSVALRVAEC-FDKIRVN--PG 190 (640)
Q Consensus 118 ~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~-~iPLVADIHF~~~~Al~Aa~~-v~KVRIN--PG 190 (640)
..+.+++.++.++|+|.|=+..-. ..-.+.++.|++. + ++|+++=-=-++..|..+++. ++.|.+. ||
T Consensus 232 ~~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~-----~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g 306 (491)
T 1zfj_A 232 SDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAH-----FPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPG 306 (491)
T ss_dssp TTHHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHH-----CSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCC
T ss_pred hhHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHH-----CCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCC
Confidence 345788999999999987766521 2234556666664 5 689886545568899889888 9999984 44
Q ss_pred CCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 191 NFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 191 N~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
.+.... .+..... ..-+.+.++.+.|++.++|+
T Consensus 307 ~~~~tr-~~~~~~~----------p~~~~l~~~~~~~~~~~ipv 339 (491)
T 1zfj_A 307 SICTTR-VVAGVGV----------PQVTAIYDAAAVAREYGKTI 339 (491)
T ss_dssp TTBCHH-HHTCCCC----------CHHHHHHHHHHHHHHTTCEE
T ss_pred cceEEe-eecCCCC----------CcHHHHHHHHHHHhhcCCCE
Confidence 433321 1111110 01122456667778888888
No 474
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=40.23 E-value=1.1e+02 Score=30.22 Aligned_cols=138 Identities=15% Similarity=0.166 Sum_probs=85.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC--HHHH----HHHhhh-cCce
Q 006566 113 DTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA--PSVA----LRVAEC-FDKI 185 (640)
Q Consensus 113 ~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~--~~~A----l~Aa~~-v~KV 185 (640)
|+.|.+.+++-+.++.+ .+..+-+-.+=.. +.-. ++.+.|+++ ..++++|.||. |+-. ..++++ ++-|
T Consensus 16 D~~~~~~al~l~~~~~~-~v~~~Kvg~~lf~-~~G~-~~v~~L~~~--g~~iflDlK~~DI~nTv~~~~~~~~~~gad~v 90 (239)
T 3tr2_A 16 DAGTVEQARAQINPLTP-ELCHLKIGSILFT-RYGP-AFVEELMQK--GYRIFLDLKFYDIPQTVAGACRAVAELGVWMM 90 (239)
T ss_dssp CCSSHHHHHHHHTTCCT-TTCEEEEEHHHHH-HHHH-HHHHHHHHT--TCCEEEEEEECSCHHHHHHHHHHHHHTTCSEE
T ss_pred CCCCHHHHHHHHHHhCC-cccEEEeCHHHHH-hhCH-HHHHHHHhc--CCCEEEEecccccchHHHHHHHHHHhCCCCEE
Confidence 44555555444443321 2334444443332 2222 233345554 57899999994 5543 345556 8888
Q ss_pred eeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcC---CeEEEee-CCCCCcHhHHHHhCCChHHHHHH
Q 006566 186 RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYG---RAVRIGT-NHGSLSDRIMSYYGDSPRGMVES 261 (640)
Q Consensus 186 RINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g---~aIRIGv-NhGSLs~ril~ryGdtp~gMVeS 261 (640)
=++| ++..+ -++++++.+++++ .+.=+|| ---|.|..-+...|-+ ..+-+.
T Consensus 91 Tvh~--~~G~~----------------------~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~l~~~g~~-~~~~~~ 145 (239)
T 3tr2_A 91 NIHI--SGGRT----------------------MMETVVNALQSITLKEKPLLIGVTILTSLDGSDLKTLGIQ-EKVPDI 145 (239)
T ss_dssp EEEG--GGCHH----------------------HHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHHHHHTTCC-SCHHHH
T ss_pred EEec--cCCHH----------------------HHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHHHHhcCCC-CCHHHH
Confidence 8887 44322 3788888888864 4544674 6778887666555632 356788
Q ss_pred HHHHHHHHHHCCCCcEEEE
Q 006566 262 AFEFARICRKLDFHNFLFS 280 (640)
Q Consensus 262 Ale~~~i~e~~~F~diviS 280 (640)
+++.++.+.+.|..-+|.|
T Consensus 146 v~~~A~~a~~~g~~GvV~s 164 (239)
T 3tr2_A 146 VCRMATLAKSAGLDGVVCS 164 (239)
T ss_dssp HHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHHcCCCEEEEC
Confidence 8999999999998888866
No 475
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=40.03 E-value=74 Score=32.34 Aligned_cols=51 Identities=25% Similarity=0.271 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEecC-----CHHH-----HHHHHHHHHHhhcCCCCcceeeccCCC
Q 006566 118 AGTVEEVMRIADQGADLVRITVQ-----GKRE-----ADACFEIKNSLVQKNYNIPLVADIHFA 171 (640)
Q Consensus 118 ~atv~Qi~rl~~aGceiVRvtvp-----~~~~-----A~~l~~I~~~L~~~g~~iPLVADIHF~ 171 (640)
+.+++-++.+.++||+.|-+.-+ +.++ ...+++|.+.+++.+-.+|+ |||-
T Consensus 193 ~~~~~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~---ih~c 253 (353)
T 1j93_A 193 TSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPL---ILYA 253 (353)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCE---EEEC
T ss_pred HHHHHHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCE---EEEC
Confidence 35666778889999999988632 3443 34556677776655323565 3654
No 476
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=39.89 E-value=2e+02 Score=28.91 Aligned_cols=75 Identities=15% Similarity=0.200 Sum_probs=51.2
Q ss_pred CceEEEeccCCC--CCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHh
Q 006566 102 HPIRVQTMTTND--TKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVA 179 (640)
Q Consensus 102 ~PI~VQSMt~t~--T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa 179 (640)
.|+.|+-|.+.. ..+. .+++..+.++|+++|=+..... .+-++.+++ ..+|++.+++ ++..|..+.
T Consensus 68 ~p~~v~l~v~~~~~~~~~---~~~~~~~~~~g~d~V~~~~g~p--~~~~~~l~~------~gi~vi~~v~-t~~~a~~~~ 135 (328)
T 2gjl_A 68 RPFGVNLTLLPTQKPVPY---AEYRAAIIEAGIRVVETAGNDP--GEHIAEFRR------HGVKVIHKCT-AVRHALKAE 135 (328)
T ss_dssp SCCEEEEEECCCSSCCCH---HHHHHHHHHTTCCEEEEEESCC--HHHHHHHHH------TTCEEEEEES-SHHHHHHHH
T ss_pred CCeEEEEeccccccCccH---HHHHHHHHhcCCCEEEEcCCCc--HHHHHHHHH------cCCCEEeeCC-CHHHHHHHH
Confidence 455666666521 1232 4567778889999999987553 344555554 3688898875 678888888
Q ss_pred hh-cCceeeC
Q 006566 180 EC-FDKIRVN 188 (640)
Q Consensus 180 ~~-v~KVRIN 188 (640)
+. +|-|=+.
T Consensus 136 ~~GaD~i~v~ 145 (328)
T 2gjl_A 136 RLGVDAVSID 145 (328)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCCEEEEE
Confidence 87 8988883
No 477
>3anu_A D-serine dehydratase; PLP-dependent fold-type III enzyme, PL binding, zinc binding, lyase; HET: PLP; 1.90A {Gallus gallus} PDB: 3anv_A* 3awn_A* 3awo_A*
Probab=39.86 E-value=50 Score=33.67 Aligned_cols=148 Identities=20% Similarity=0.161 Sum_probs=74.0
Q ss_pred HHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhc---CceeeCCCCCCchhhhcc
Q 006566 124 VMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECF---DKIRVNPGNFADRRAQFE 200 (640)
Q Consensus 124 i~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v---~KVRINPGN~~d~~k~F~ 200 (640)
++.+.++|+ -.++|-+..||+.+.+ .|++-++++=-+. +.-...+++.. ..|.++ + |..
T Consensus 53 ~~~l~~~G~--~~~~vas~~Ea~~~~~-------~G~~~ii~~~~~~-~~~l~~~~~l~~~~~~i~~~---v-ds~---- 114 (376)
T 3anu_A 53 GLLATGGTR--RGIAVSTLAEARFFAD-------GGFDDILLAYPVP-TARLEECAGLARRLDAFHVL---L-DRP---- 114 (376)
T ss_dssp HHHHTTTCC--EEEEESSHHHHHHHHH-------TTCEEEEEEEECC-GGGHHHHHHHHHHSSCEEEE---E-CCH----
T ss_pred HHHHHHCCC--CeEEEccHHHHHHHHH-------CCCCeEEEECCCc-HHHHHHHHHHHhcCCcEEEE---e-CCH----
Confidence 344557786 4799999999988643 3676555544444 43333444432 123332 1 211
Q ss_pred ccccchHHHHHHHhhhHhhHHHHHHHHHHcCC--eEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHC---CCC
Q 006566 201 QLEYTDDEYQKELQHIEEVFSPLVEKCKKYGR--AVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKL---DFH 275 (640)
Q Consensus 201 ~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~--aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~---~F~ 275 (640)
+ + +..+-+.|++.|. .+.|=+|.| |+|+|-+|+.- .+.+.++.+.+. +.+
T Consensus 115 -------~---~-------l~~l~~~a~~~~~~~~V~l~vd~g------~~R~G~~~~~~--~~~~l~~~i~~~~~~~l~ 169 (376)
T 3anu_A 115 -------E---A-------LASLRQRPLGHGKRWLVWLKLDCG------NGRAGVRPTDP--AALELAQAIANDAPEEVT 169 (376)
T ss_dssp -------H---H-------HHHHHTSCCCTTCCEEEEEEECCC--------CSSBCTTSH--HHHHHHHHHHHSCTTTEE
T ss_pred -------H---H-------HHHHHHHHHhCCCceEEEEEECCC------CCcCCCCCCch--hHHHHHHHHhCCCCCceE
Confidence 1 2 2233334445554 345556776 57899666420 244555555443 221
Q ss_pred cE-EEEE-----EeCChh-------hHHHHHHHHHHHHHHcCCCcc-eEEEee
Q 006566 276 NF-LFSM-----KASNPV-------VMVQAYRLLVAEMYVHGWDYP-LHLGVT 314 (640)
Q Consensus 276 di-viSm-----KsSn~~-------~mV~AyRlL~~~m~~~g~dyP-LHLGVT 314 (640)
=. +.+. ..++.. .-++.++.+++.+.+.|++.| +|+|=|
T Consensus 170 l~Gl~~h~g~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~vs~Ggs 222 (376)
T 3anu_A 170 LVGVYAHCGNTYGCSGADTIQAIARTTTNAVLSFVAALRQAGVPCPQASIGST 222 (376)
T ss_dssp EEEEEECCGGGC-CCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEECCH
T ss_pred EEEEEeeCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEccC
Confidence 11 1122 112321 124455667778888888766 577744
No 478
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=39.70 E-value=2.5e+02 Score=26.47 Aligned_cols=138 Identities=12% Similarity=0.035 Sum_probs=73.9
Q ss_pred HHHHHHHHHHhhcCCC-CcceeeccCCCHHHHHHHhh----h-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHh
Q 006566 145 ADACFEIKNSLVQKNY-NIPLVADIHFAPSVALRVAE----C-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEE 218 (640)
Q Consensus 145 A~~l~~I~~~L~~~g~-~iPLVADIHF~~~~Al~Aa~----~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~ 218 (640)
.+.+..|.+.+.+.|+ .+ ++.|.+.++......++ . ++.|=+.|.+...
T Consensus 18 ~~~~~gi~~~a~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~------------------------ 72 (309)
T 2fvy_A 18 SVVRKAIEQDAKAAPDVQL-LMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAA------------------------ 72 (309)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSGGG------------------------
T ss_pred HHHHHHHHHHHHhcCCeEE-EEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcch------------------------
Confidence 4566677777777887 65 45566777654433322 2 7777777754321
Q ss_pred hHHHHHHHHHHcCCeEEEeeCCCCCcHhH-----HHHhCCChHHHHHHHHHH-HHHHHH--------CCCCcEEEEEEeC
Q 006566 219 VFSPLVEKCKKYGRAVRIGTNHGSLSDRI-----MSYYGDSPRGMVESAFEF-ARICRK--------LDFHNFLFSMKAS 284 (640)
Q Consensus 219 ~f~~lV~~~Ke~g~aIRIGvNhGSLs~ri-----l~ryGdtp~gMVeSAle~-~~i~e~--------~~F~diviSmKsS 284 (640)
..+.++.+++.|+|+ |-+|...-...+ ....+-........|.++ ++.+.+ .|..+|.+-.-..
T Consensus 73 -~~~~~~~~~~~~iPv-V~~~~~~~~~~~~~~~~~~~V~~d~~~~g~~~~~~L~~~~~~~~~~~~~g~g~~~i~~i~~~~ 150 (309)
T 2fvy_A 73 -AGTVIEKARGQNVPV-VFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEP 150 (309)
T ss_dssp -HHHHHHHHHTTTCCE-EEESSCCCHHHHHTCTTEEEEECCHHHHHHHHHHHHHHHHHHCGGGCTTCSSSEEEEEEECST
T ss_pred -hHHHHHHHHHCCCcE-EEecCCCCcccccccCccEEEecCHHHHHHHHHHHHHHHHhhcccccccCCCceEEEEEEcCC
Confidence 345678888899997 555553221111 112232223344444444 444433 6777776543322
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcce
Q 006566 285 NPVVMVQAYRLLVAEMYVHGWDYPL 309 (640)
Q Consensus 285 n~~~mV~AyRlL~~~m~~~g~dyPL 309 (640)
+.....+-++-+.+.|.+.|.++..
T Consensus 151 ~~~~~~~R~~gf~~~l~~~g~~~~~ 175 (309)
T 2fvy_A 151 GHPDAEARTTYVIKELNDKGIKTEQ 175 (309)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCccHHHHHHHHHHHHHhcCCceEE
Confidence 2233333344466677777766543
No 479
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=39.67 E-value=2.4e+02 Score=26.32 Aligned_cols=99 Identities=13% Similarity=-0.049 Sum_probs=56.2
Q ss_pred cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHH
Q 006566 182 FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVES 261 (640)
Q Consensus 182 v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeS 261 (640)
+|.|=+.|.+-..... ..++++.+++.|+|+ |-++.-.-+.. ....+.........
T Consensus 72 vdgiIi~~~~~~~~~~----------------------~~~~~~~~~~~~iPv-V~~~~~~~~~~-~~~V~~d~~~~~~~ 127 (298)
T 3tb6_A 72 IDGLIVEPTKSALQTP----------------------NIGYYLNLEKNGIPF-AMINASYAELA-APSFTLDDVKGGMM 127 (298)
T ss_dssp CSEEEECCSSTTSCCT----------------------THHHHHHHHHTTCCE-EEESSCCTTCS-SCEEEECHHHHHHH
T ss_pred CCEEEEecccccccCC----------------------cHHHHHHHHhcCCCE-EEEecCcCCCC-CCEEEeCcHHHHHH
Confidence 7888888876532111 345778888999997 44443211111 11122123344444
Q ss_pred HHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcc
Q 006566 262 AFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYP 308 (640)
Q Consensus 262 Ale~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyP 308 (640)
|.++ +.+.|..+|.+-.-..+ ....+-++-+.+.|.+.|+.++
T Consensus 128 a~~~---L~~~G~~~i~~i~~~~~-~~~~~R~~gf~~~l~~~g~~~~ 170 (298)
T 3tb6_A 128 AAEH---LLSLGHTHMMGIFKADD-TQGVKRMNGFIQAHRERELFPS 170 (298)
T ss_dssp HHHH---HHHTTCCSEEEEEESSS-HHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHH---HHHCCCCcEEEEcCCCC-ccHHHHHHHHHHHHHHcCCCCC
Confidence 4444 45679999987766555 3344444446677888887654
No 480
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=39.57 E-value=77 Score=31.52 Aligned_cols=69 Identities=25% Similarity=0.388 Sum_probs=53.0
Q ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh
Q 006566 103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 181 (640)
Q Consensus 103 PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~ 181 (640)
||.+|-. ..|.+++++|.++|.+.+-. |-|-+|.-.+ .++.|++ |.++|+++ =+=.=|.+.=|+.|+++
T Consensus 56 ~Vs~EV~----a~d~e~mi~eA~~L~~~~~n-v~IKIP~T~e--Gl~A~~~-L~~~GI~v--n~TlifS~~QA~~Aa~A 124 (223)
T 3s1x_A 56 PVSVEVV----STKYEGMVEEARKIHGLGDN-AVVKIPMTED--GLRAIKT-LSSEHINT--NCTLVFNPIQALLAAKA 124 (223)
T ss_dssp CEEEECC----CCSHHHHHHHHHHHHHTCTT-EEEEEESSHH--HHHHHHH-HHHTTCCE--EEEEECSHHHHHHHHHT
T ss_pred CEEEEEc----cCCHHHHHHHHHHHHHhCCC-EEEEeCCCHH--HHHHHHH-HHHCCCcE--EEEEeCCHHHHHHHHHc
Confidence 9999965 48999999999999999854 5588888764 4555553 55667653 34455999999999987
No 481
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=39.42 E-value=1.3e+02 Score=31.97 Aligned_cols=109 Identities=11% Similarity=0.057 Sum_probs=69.3
Q ss_pred cCCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHH
Q 006566 98 IGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFA-PSVAL 176 (640)
Q Consensus 98 IGG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al 176 (640)
+|.+.+++|=- |. .-+.+.+++-+++|.+.|.+.+===++ .++-+.++.+++++ ..+||+.+|=++. +.-+.
T Consensus 207 ~G~~~~L~vDa--N~-~w~~~~A~~~~~~Le~~~l~~iEeP~~-~~d~~~~a~l~~~~---~~pi~Ia~gE~~~~~~~~~ 279 (404)
T 3ekg_A 207 VGPDFWLMFDC--WM-SLDLNYATRLARGAREYGLKWIEEALP-PDDYWGYAELRRNA---PTGMMVTTGEHEATRWGFR 279 (404)
T ss_dssp HCSSSEEEEEC--TT-CCCHHHHHHHHHHHGGGTCCEEECCSC-TTCHHHHHHHHHHS---CTTCEEEECTTCCHHHHHH
T ss_pred hCCCCeEEecC--CC-CCCHHHHHHHHHHHhhcCCcEEecCCC-cccHHHHHHHHHhc---CCCeEEEecCccCCHHHHH
Confidence 45555555531 11 235666677777777777665543332 23566777777751 2334588897654 33333
Q ss_pred HHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEE
Q 006566 177 RVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (640)
Q Consensus 177 ~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIR 235 (640)
.+++ +++-|++.|...|.-.. ...+...|+++|+++=
T Consensus 280 ~li~~~a~dii~~d~~~~GGite----------------------a~kia~lA~a~gv~v~ 318 (404)
T 3ekg_A 280 MLLEMGCCDIIQPDVGWCGGVTE----------------------LLKISALADAHNALVV 318 (404)
T ss_dssp HHHHTTCCSEECCCTTTTTHHHH----------------------HHHHHHHHHHTTCEEC
T ss_pred HHHHcCCCCeEecChhhcCCccH----------------------HHHHHHHHHHcCCEEE
Confidence 4433 49999999999987432 6779999999999983
No 482
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=39.38 E-value=38 Score=32.14 Aligned_cols=63 Identities=11% Similarity=0.134 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCC
Q 006566 121 VEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNP 189 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINP 189 (640)
.+++.++.++|+++|=+..++....+..+.|++ |.+ .+.+|++-+=| +.+|.++ -++-|=++.
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k~~~~~~~~~~i~~-l~~-~~~~~livnd~--~~~A~~~--gadgvhl~~ 78 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKPETPAMYSERLLTL-IPE-KYHRRIVTHEH--FYLKEEF--NLMGIHLNA 78 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHH-SCG-GGGGGEEESSC--TTHHHHT--TCSEEECCS
T ss_pred HHHHHHHHHCCCCEEEEccCCCCHHHHHHHHHH-HHH-HhCCeEEEeCC--HHHHHHc--CCCEEEECc
Confidence 488899999999999999887655555555544 554 37899997544 3555442 156665543
No 483
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=39.38 E-value=3.7e+02 Score=29.01 Aligned_cols=159 Identities=16% Similarity=0.197 Sum_probs=83.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC---HHHHHHHHHHHHHhhcCCCCcceeecc-------CCC--HHHHHHHhhhc
Q 006566 115 KDVAGTVEEVMRIADQGADLVRITVQG---KREADACFEIKNSLVQKNYNIPLVADI-------HFA--PSVALRVAECF 182 (640)
Q Consensus 115 ~Dv~atv~Qi~rl~~aGceiVRvtvp~---~~~A~~l~~I~~~L~~~g~~iPLVADI-------HF~--~~~Al~Aa~~v 182 (640)
.|++..++++.+..+.|||+|=+-+.- ...++.+..+++ ..++|+|.-+ +|+ ...-++..+.
T Consensus 14 ~~~~~~~~~~~~~~~~g~D~vElRvD~l~~~~~~~~l~~l~~-----~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~- 87 (523)
T 2o7s_A 14 DSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIK-----KSPLPTLFTYRPKWEGGQYEGDENERRDVLRL- 87 (523)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEEGGGCSSCCHHHHHHHHHH-----HCSSCEEEECCBGGGTSSBCSCHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHhhhcCCCEEEEEEecccccChHHHHHHHHh-----cCCCcEEEEecccccCCCCCCCHHHHHHHHHH-
Confidence 578889999999999999999777632 223556666654 3779998643 121 1111111111
Q ss_pred CceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHH
Q 006566 183 DKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESA 262 (640)
Q Consensus 183 ~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSA 262 (640)
.+|.+| .|.| +|++ .-++.+..+++ .|..++.| |+-.|= |..||. .+..
T Consensus 88 -~~~~~~-~yiD-------vEl~---------~~~~~~~~~~~-~~~~~~ki-I~S~H~---------f~~tp~--~~~~ 136 (523)
T 2o7s_A 88 -AMELGA-DYID-------VELQ---------VASEFIKSIDG-KKPGKFKV-IVSSHN---------YQNTPS--VEDL 136 (523)
T ss_dssp -HHHHTC-SEEE-------EEHH---------HHHHHHHHTTT-CCCTTCEE-EEEEEC---------SSCCCC--HHHH
T ss_pred -HHHhCC-CEEE-------EECC---------CchHHHHHHHH-hccCCCEE-EEEccc---------CCCCcC--HHHH
Confidence 123332 2333 1211 00111111111 12223433 565551 123552 1455
Q ss_pred HHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcce-EEEeecC
Q 006566 263 FEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPL-HLGVTEA 316 (640)
Q Consensus 263 le~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPL-HLGVTEA 316 (640)
++.++-+++.|-+=++|-..+.+......-.+. ..+ .+.|+ -+..-|.
T Consensus 137 ~~~~~~~~~~gaDivKia~~a~~~~D~~~l~~~-~~~-----~~~p~i~~~MG~~ 185 (523)
T 2o7s_A 137 DGLVARIQQTGADIVKIATTAVDIADVARMFHI-TSK-----AQVPTIGLVMGER 185 (523)
T ss_dssp HHHHHHHHTTTCSEEEEEEECSSGGGHHHHHHH-HHH-----CSSCEEEEEESGG
T ss_pred HHHHHHHHHhCCCEEEEEecCCCHHHHHHHHHH-Hhh-----cCCCEEEEEcCCC
Confidence 666777888898888888888887765443332 233 35675 3444443
No 484
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=39.38 E-value=99 Score=30.47 Aligned_cols=71 Identities=11% Similarity=0.166 Sum_probs=53.4
Q ss_pred ceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh-
Q 006566 103 PIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC- 181 (640)
Q Consensus 103 PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~- 181 (640)
||.+|- -..|.+++++|.++|.+.+-. |-|-+|.-.+ .++.|++ |.++|+++ =+=.=|.+.=|+.|+++
T Consensus 54 ~Vs~EV----~a~d~e~mi~ea~~l~~~~~n-v~IKIP~T~e--Gl~A~~~-L~~~GI~v--n~TlifS~~Qa~~Aa~AG 123 (212)
T 3r8r_A 54 SVSAEV----ISLKAEEMIEEGKELAKIAPN-ITVKIPMTSD--GLKAVRA-LTDLGIKT--NVTLIFNANQALLAARAG 123 (212)
T ss_dssp CEEEEC----CCSSHHHHHHHHHHHHTTCTT-EEEEEESSHH--HHHHHHH-HHHTTCCE--EEEEECSHHHHHHHHHHT
T ss_pred CEEEEE----ecCCHHHHHHHHHHHHHhCCC-EEEEeCCCHH--HHHHHHH-HHHCCCcE--EEEEeCCHHHHHHHHHcC
Confidence 999998 357999999999999999754 5588888764 4555543 55667653 34455999999999998
Q ss_pred cC
Q 006566 182 FD 183 (640)
Q Consensus 182 v~ 183 (640)
+.
T Consensus 124 a~ 125 (212)
T 3r8r_A 124 AT 125 (212)
T ss_dssp CS
T ss_pred Ce
Confidence 53
No 485
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=39.24 E-value=1.7e+02 Score=29.54 Aligned_cols=86 Identities=13% Similarity=0.116 Sum_probs=57.9
Q ss_pred CCCCceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecC--------------------C----HHHHHHHHHHHHH
Q 006566 99 GSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQ--------------------G----KREADACFEIKNS 154 (640)
Q Consensus 99 GG~~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp--------------------~----~~~A~~l~~I~~~ 154 (640)
|.+-||.|- ++ ...+.+.+++-++.+.++|+|.|=++-- + ....+.+++|++.
T Consensus 209 g~~~Pv~vK-i~--~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~ 285 (336)
T 1f76_A 209 HKYVPIAVK-IA--PDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLE 285 (336)
T ss_dssp TSCCCEEEE-CC--SCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHH
T ss_pred cccCceEEE-ec--CCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHH
Confidence 346788876 32 2244566777789999999999988621 1 0123667778775
Q ss_pred hhcCCCCcceeeccCC-CHHHHHHHhhh-cCceeeCCC
Q 006566 155 LVQKNYNIPLVADIHF-APSVALRVAEC-FDKIRVNPG 190 (640)
Q Consensus 155 L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~KVRINPG 190 (640)
+. -++|++|.--. ++.-|.++++. ++-|=|-=+
T Consensus 286 ~~---~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~ 320 (336)
T 1f76_A 286 LN---GRLPIIGVGGIDSVIAAREKIAAGASLVQIYSG 320 (336)
T ss_dssp HT---TSSCEEEESSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred hC---CCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHH
Confidence 31 16999998654 69999998887 877755333
No 486
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=39.21 E-value=1.7e+02 Score=29.37 Aligned_cols=48 Identities=29% Similarity=0.247 Sum_probs=36.4
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCC--CCcEEEEEEeCChh
Q 006566 220 FSPLVEKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLD--FHNFLFSMKASNPV 287 (640)
Q Consensus 220 f~~lV~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~--F~diviSmKsSn~~ 287 (640)
+.++++.++++|+.+.|-|| |++ + +.++-+.+.| ...+.||+++.|..
T Consensus 159 l~~ll~~~~~~g~~i~l~TN-G~~-~------------------e~l~~L~~~g~~~~~l~isld~~~~e 208 (342)
T 2yx0_A 159 MGDLVEEFHKRGFTTFIVTN-GTI-P------------------ERLEEMIKEDKLPTQLYVSITAPDIE 208 (342)
T ss_dssp HHHHHHHHHHTTCEEEEEEC-SCC-H------------------HHHHHHHHTTCCCSEEEEEECCSSHH
T ss_pred HHHHHHHHHHCCCcEEEEcC-CCc-H------------------HHHHHHHhcCCCCCEEEEEccCCCHH
Confidence 78899999999998988887 555 2 1334445555 78999999998754
No 487
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=38.99 E-value=1.2e+02 Score=28.16 Aligned_cols=105 Identities=17% Similarity=0.223 Sum_probs=59.4
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHcCCCE--EEEe----cCCHHH-HHHHHHHHHHhhcCCCCcceeeccCCC-H-HHHH
Q 006566 106 VQTMTTNDTKDVAGTVEEVMRIADQGADL--VRIT----VQGKRE-ADACFEIKNSLVQKNYNIPLVADIHFA-P-SVAL 176 (640)
Q Consensus 106 VQSMt~t~T~Dv~atv~Qi~rl~~aGcei--VRvt----vp~~~~-A~~l~~I~~~L~~~g~~iPLVADIHF~-~-~~Al 176 (640)
.-|+..-|. ....++++.+.++|+++ +|+- .+.... .+.+++|++. ++.|+.+|.=.+ + +...
T Consensus 7 ~~~i~a~D~---~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~-----~~~~~~v~l~v~d~~~~i~ 78 (220)
T 2fli_A 7 APSILAADY---ANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH-----SKLVFDCHLMVVDPERYVE 78 (220)
T ss_dssp EEBGGGSCG---GGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTT-----CCSEEEEEEESSSGGGGHH
T ss_pred EEEEEeCCH---HHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHh-----CCCCEEEEEeecCHHHHHH
Confidence 456666665 44456777888899999 5652 232111 4455556552 467877765433 2 3346
Q ss_pred HHhhh-cCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEEeeCCCCC
Q 006566 177 RVAEC-FDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRIGTNHGSL 243 (640)
Q Consensus 177 ~Aa~~-v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRIGvNhGSL 243 (640)
.++++ ++-|=+-.+-. + ....+++.++++|..+=+.+|..+.
T Consensus 79 ~~~~~gad~v~vh~~~~-~------------------------~~~~~~~~~~~~g~~i~~~~~~~t~ 121 (220)
T 2fli_A 79 AFAQAGADIMTIHTEST-R------------------------HIHGALQKIKAAGMKAGVVINPGTP 121 (220)
T ss_dssp HHHHHTCSEEEEEGGGC-S------------------------CHHHHHHHHHHTTSEEEEEECTTSC
T ss_pred HHHHcCCCEEEEccCcc-c------------------------cHHHHHHHHHHcCCcEEEEEcCCCC
Confidence 66666 77665432211 1 1445778888888654444454443
No 488
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=38.95 E-value=75 Score=33.58 Aligned_cols=71 Identities=18% Similarity=0.253 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHc-CC-eEEEeeCC-CCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHH
Q 006566 219 VFSPLVEKCKKY-GR-AVRIGTNH-GSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRL 295 (640)
Q Consensus 219 ~f~~lV~~~Ke~-g~-aIRIGvNh-GSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRl 295 (640)
.+..+++.+++. ++ .|||++|. =.++.++ | -+.++.+.+. +.+.||+.+.++..+.+....
T Consensus 180 ~L~~il~~l~~~~~v~~i~i~Tng~~~~p~~i------t--------~e~l~~L~~~--~~v~Isl~~~~~~ei~~~v~~ 243 (416)
T 2a5h_A 180 TLEYIIAKLREIPHVEIVRIGSRTPVVLPQRI------T--------PELVNMLKKY--HPVWLNTHFNHPNEITEESTR 243 (416)
T ss_dssp HHHHHHHHHHTSTTCCEEEEECSHHHHCGGGC------C--------HHHHHHHGGG--CSEEEEECCCSGGGCCHHHHH
T ss_pred HHHHHHHHHHhcCCccEEEEEecccccccccC------C--------HHHHHHHHhc--CcEEEEEecCCHHHHhHHHHH
Confidence 377788888876 44 69999986 1222221 1 1344445554 667888888776443344444
Q ss_pred HHHHHHHcCC
Q 006566 296 LVAEMYVHGW 305 (640)
Q Consensus 296 L~~~m~~~g~ 305 (640)
-.+++.+.|+
T Consensus 244 ai~~L~~aGi 253 (416)
T 2a5h_A 244 ACQLLADAGV 253 (416)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 4445555554
No 489
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=38.95 E-value=30 Score=36.58 Aligned_cols=63 Identities=16% Similarity=0.177 Sum_probs=44.5
Q ss_pred HHHHHHHHHHcCCCEEEEecCC-------------HHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhhh-cCc
Q 006566 120 TVEEVMRIADQGADLVRITVQG-------------KREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAEC-FDK 184 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp~-------------~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~~-v~K 184 (640)
|.+++++++++|||.|-+..-. ...+.++.++.+. .. |++||-=. ++.-+.+|+.. ++-
T Consensus 151 T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~-----~~-PVIAdGGI~~~~di~kALa~GAd~ 224 (361)
T 3r2g_A 151 TYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRA-----DR-SIVADGGIKTSGDIVKALAFGADF 224 (361)
T ss_dssp SHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTS-----SS-EEEEESCCCSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHh-----CC-CEEEECCCCCHHHHHHHHHcCCCE
Confidence 5788999999999999985321 1234555555442 22 99999776 47777788877 888
Q ss_pred eeeC
Q 006566 185 IRVN 188 (640)
Q Consensus 185 VRIN 188 (640)
|=|-
T Consensus 225 V~iG 228 (361)
T 3r2g_A 225 VMIG 228 (361)
T ss_dssp EEES
T ss_pred EEEC
Confidence 7664
No 490
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}
Probab=38.89 E-value=62 Score=34.05 Aligned_cols=79 Identities=15% Similarity=0.190 Sum_probs=58.8
Q ss_pred HhhhHhhHHHHH--HHHHHcCCeEEEeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCC--cEEEEEEeCChhh
Q 006566 213 LQHIEEVFSPLV--EKCKKYGRAVRIGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFH--NFLFSMKASNPVV 288 (640)
Q Consensus 213 le~I~~~f~~lV--~~~Ke~g~aIRIGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~--diviSmKsSn~~~ 288 (640)
++..-++|.+.. ++|+- ..|-+|-.+..++..+.++||+.|.+..+++++.|.+ |++|-+-++. .
T Consensus 74 v~~a~D~l~v~~g~ei~~~---------v~G~VS~EV~~~ls~d~e~~i~eA~~l~~l~~~~gi~~~nv~IKIP~T~--e 142 (334)
T 3hjz_A 74 IKETVDQVSVFFGKEILKI---------ISGRVSTEVDARLSFDTEATVKKARKLINLYKNFGIEKERILIKIAATW--E 142 (334)
T ss_dssp HHHHHHHHHHHHHHHHHTT---------CSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSH--H
T ss_pred HHHHHHHHHHHHHHHHhcC---------CCCCEEEEEcCCccCCHHHHHHHHHHHHHHhhhhCCCCCcEEEEeCCCH--H
Confidence 344555666666 44442 2677777777777778899999999999999999997 8998888875 5
Q ss_pred HHHHHHHHHHHHHHcCCC
Q 006566 289 MVQAYRLLVAEMYVHGWD 306 (640)
Q Consensus 289 mV~AyRlL~~~m~~~g~d 306 (640)
-++|-+.|. ++|+.
T Consensus 143 Gl~A~~~L~----~~GI~ 156 (334)
T 3hjz_A 143 GIKAAEILE----KEGIK 156 (334)
T ss_dssp HHHHHHHHH----HTTCC
T ss_pred HHHHHHHHH----HCCCc
Confidence 688877664 45654
No 491
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=38.81 E-value=32 Score=35.01 Aligned_cols=120 Identities=23% Similarity=0.283 Sum_probs=79.6
Q ss_pred CCcceeeccCCCHHHHH----HHhhhcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEE
Q 006566 160 YNIPLVADIHFAPSVAL----RVAECFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (640)
Q Consensus 160 ~~iPLVADIHF~~~~Al----~Aa~~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIR 235 (640)
..+..|=|=++.++... .|.+++|-+-+-=|...=-. ++.+++.++.|++||+.+=
T Consensus 13 ~GlT~v~dkglg~~~~~d~Le~~g~yID~lKfg~Gt~~l~~--------------------~~~l~eki~l~~~~gV~v~ 72 (251)
T 1qwg_A 13 RGLTVVLDKGLPPKFVEDYLKVCGDYIDFVKFGWGTSAVID--------------------RDVVKEKINYYKDWGIKVY 72 (251)
T ss_dssp CCCEEEEESSCCHHHHHHHHHHHGGGCSEEEECTTGGGGSC--------------------HHHHHHHHHHHHTTTCEEE
T ss_pred cCeeEEecCCCCHHHHHHHHHHhhhhcceEEecCceeeecC--------------------HHHHHHHHHHHHHcCCeEE
Confidence 33456667777766554 45556777777666544322 2358889999999999983
Q ss_pred EeeCCCCCcHhHHHHhCCChHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChhhHHHHHHHHHHHHHHcCCCcceEEEeec
Q 006566 236 IGTNHGSLSDRIMSYYGDSPRGMVESAFEFARICRKLDFHNFLFSMKASNPVVMVQAYRLLVAEMYVHGWDYPLHLGVTE 315 (640)
Q Consensus 236 IGvNhGSLs~ril~ryGdtp~gMVeSAle~~~i~e~~~F~diviSmKsSn~~~mV~AyRlL~~~m~~~g~dyPLHLGVTE 315 (640)
-| |.|=+..+.+ + +.-+|++.|+++||+-|-||-=+-+.. -.....+.++..++|+.- .||
T Consensus 73 ~G---GTl~E~~~~q------g---~~~~yl~~~k~lGf~~iEiS~G~i~l~--~~~~~~~I~~~~~~G~~v-----~~E 133 (251)
T 1qwg_A 73 PG---GTLFEYAYSK------G---KFDEFLNECEKLGFEAVEISDGSSDIS--LEERNNAIKRAKDNGFMV-----LTE 133 (251)
T ss_dssp EC---HHHHHHHHHT------T---CHHHHHHHHHHHTCCEEEECCSSSCCC--HHHHHHHHHHHHHTTCEE-----EEE
T ss_pred CC---cHHHHHHHHc------C---cHHHHHHHHHHcCCCEEEECCCcccCC--HHHHHHHHHHHHHCCCEE-----eee
Confidence 33 3343333322 1 556899999999999999986555432 444555888888888765 677
Q ss_pred CCC
Q 006566 316 AGE 318 (640)
Q Consensus 316 AG~ 318 (640)
-|.
T Consensus 134 vG~ 136 (251)
T 1qwg_A 134 VGK 136 (251)
T ss_dssp ECC
T ss_pred ccc
Confidence 763
No 492
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=38.47 E-value=4.4e+02 Score=29.51 Aligned_cols=211 Identities=9% Similarity=0.090 Sum_probs=119.1
Q ss_pred eEEEceeecCCCCceEEEeccCCCCCCHH-HHHHHHHHHHHcCCCEEE-----Ee-----cC-------CHHHHHHHHHH
Q 006566 90 TVMVGNVAIGSEHPIRVQTMTTNDTKDVA-GTVEEVMRIADQGADLVR-----IT-----VQ-------GKREADACFEI 151 (640)
Q Consensus 90 ~V~VG~v~IGG~~PI~VQSMt~t~T~Dv~-atv~Qi~rl~~aGceiVR-----vt-----vp-------~~~~A~~l~~I 151 (640)
.++||++.+ .|+|..-+|++..+.+.. ..++--.+.++-|+-+|= +. .| +.+..+.++++
T Consensus 12 p~~ig~~~l--~NRiv~apm~~~~~~~~~~~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (729)
T 1o94_A 12 PIQIGPKTL--RNRFYQVPHCIGAGSDKPGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAM 89 (729)
T ss_dssp CEEETTEEE--SSSEEECCCCCSCTTTCHHHHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHH
T ss_pred CeeECCEEE--CCccEECCCcCCcCCCCcHHHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHH
Confidence 478899888 799999999886554332 333334455666776652 21 11 24556789999
Q ss_pred HHHhhcCCCCcceeeccCCCHHHHHHHhhhcCceeeCCCCCCchhh-hccccccchHHHHHHHhhhHhhHHHHHHHHHHc
Q 006566 152 KNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRA-QFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKY 230 (640)
Q Consensus 152 ~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~v~KVRINPGN~~d~~k-~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~ 230 (640)
.+..++.|. |+++=|+-.-+.+.... -..--+-|-.+..... ...-.+.|. +|++.|-+.|..-.+.|++.
T Consensus 90 ~~~vh~~g~--~i~~Ql~h~Gr~~~~~~--~~~~~~~ps~~~~~~~~~~~p~~~t~----~eI~~~i~~f~~aA~~a~~a 161 (729)
T 1o94_A 90 TDEVHKYGA--LAGVELWYGGAHAPNME--SRATPRGPSQYASEFETLSYCKEMDL----SDIAQVQQFYVDAAKRSRDA 161 (729)
T ss_dssp HHHHHTTTC--EEEEEEECCGGGSCCTT--TCCCCEESSCCBCSSSTTCBCEECCH----HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCC--eEEEEecCCCccccccc--cCCCCcCCCcccccccCCCCCCcCCH----HHHHHHHHHHHHHHHHHHHc
Confidence 888887764 56666654333221000 0001122333322110 012234554 46888888899999999998
Q ss_pred CC-eEEEeeCCCCCcHhHHH--------HhCCChHHHHHHHHHHHHHHHH-CCCCcEEEEEEeCCh------hhH-HHHH
Q 006566 231 GR-AVRIGTNHGSLSDRIMS--------YYGDSPRGMVESAFEFARICRK-LDFHNFLFSMKASNP------VVM-VQAY 293 (640)
Q Consensus 231 g~-aIRIGvNhGSLs~ril~--------ryGdtp~gMVeSAle~~~i~e~-~~F~diviSmKsSn~------~~m-V~Ay 293 (640)
|. .|-|=.-||-|=+.+|+ +||.+.+.=..-++|-++-.++ .| .|+.|.+|=|-. -.. .+..
T Consensus 162 GfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg-~~~pv~vrls~~~~~~~~G~~~~~~~ 240 (729)
T 1o94_A 162 GFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVG-SDCAIATRFGVDTVYGPGQIEAEVDG 240 (729)
T ss_dssp TCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHT-TTSEEEEEEEEECSSCTTSCCTTTHH
T ss_pred CCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhC-CCceEEEEEccccCcCCCCCCchHHH
Confidence 75 56776678887666664 4786655545555565554433 32 244566665410 001 2223
Q ss_pred HHHHHHHHHcCCC-cceEEE
Q 006566 294 RLLVAEMYVHGWD-YPLHLG 312 (640)
Q Consensus 294 RlL~~~m~~~g~d-yPLHLG 312 (640)
..+++.+++ +.| +-+|.|
T Consensus 241 ~~~~~~l~~-~~d~~~v~~g 259 (729)
T 1o94_A 241 QKFVEMADS-LVDMWDITIG 259 (729)
T ss_dssp HHHHHHHGG-GCSEEEEEEC
T ss_pred HHHHHHHHh-hcCEEEEeee
Confidence 346666655 677 456766
No 493
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=38.45 E-value=23 Score=36.26 Aligned_cols=140 Identities=16% Similarity=0.252 Sum_probs=85.5
Q ss_pred cCCCCceEEEecc--CCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcC-----CCCcceee----
Q 006566 98 IGSEHPIRVQTMT--TNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQK-----NYNIPLVA---- 166 (640)
Q Consensus 98 IGG~~PI~VQSMt--~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~-----g~~iPLVA---- 166 (640)
|||+ -+.|+||. ..+.++.+.+-.++++|.+| |+|=..=.+.+ .-+.++.+.+.+. .-.++++.
T Consensus 48 I~Gd-~v~V~~Lv~pg~dPH~yeptp~d~~~l~~A--Dlvv~nG~~lE--~wl~k~~~~~~~~~~v~~s~gi~~~~~~~~ 122 (307)
T 3ujp_A 48 VAGD-KLVVESITRIGAEIHGYEPTPSDIVKAQDA--DLILYNGMNLE--RWFEQFLGNVKDVPSVVLTEGIEPIPIADG 122 (307)
T ss_dssp HHTT-SSEEEESSCSSCCSSSCCCCHHHHHHHHHC--SEEEECCTTSS--TTHHHHHHTSCSCCEEETTTTCCCCBCCSS
T ss_pred HcCC-ceEEEEcCCCCCCCcccCCCHHHHHHHhcC--CEEEEcCCChH--HHHHHHHHhCCCCCEEEeeCCccccccccc
Confidence 5665 58999996 45779999999999999986 66655444555 3555555543110 00111111
Q ss_pred ------c--cCCCHHHHHHHhhh-cCce-eeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEEE
Q 006566 167 ------D--IHFAPSVALRVAEC-FDKI-RVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVRI 236 (640)
Q Consensus 167 ------D--IHF~~~~Al~Aa~~-v~KV-RINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIRI 236 (640)
| +.++|..|...++. .+++ ++.|.|=.. |+. .-+.|.++|+.+.++++..+..++..++.+
T Consensus 123 ~~~~~~DPHvWldp~n~~~~a~~I~~~L~~~DP~~a~~----Y~~---Na~~~~~~L~~Ld~~~~~~l~~~p~~~~~~-- 193 (307)
T 3ujp_A 123 PYTDKPNPHAWMSPRNALVYVENIRQAFVELDPDNAKY----YNA---NAAVYSEQLKAIDRQLGADLEQVPANQRFL-- 193 (307)
T ss_dssp SSTTSBCCCCTTCHHHHHHHHHHHHHHHHHHCGGGHHH----HHH---HHHHHHHHHHHHHHHHHHHHSSSCGGGCEE--
T ss_pred cCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCchhHHH----HHH---HHHHHHHHHHHHHHHHHHHHhhccccCCEE--
Confidence 3 33678888877776 3333 477866322 111 135699999999999988887765444444
Q ss_pred eeCCCCCcHhHHHHhC
Q 006566 237 GTNHGSLSDRIMSYYG 252 (640)
Q Consensus 237 GvNhGSLs~ril~ryG 252 (640)
=|.|.++. -+..+||
T Consensus 194 v~~H~af~-Yfa~~yG 208 (307)
T 3ujp_A 194 VSCEGAFS-YLARDYG 208 (307)
T ss_dssp EEEESTTH-HHHHHTT
T ss_pred EEECchHH-HHHHHCC
Confidence 56677662 2344444
No 494
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=38.35 E-value=78 Score=32.26 Aligned_cols=50 Identities=16% Similarity=0.098 Sum_probs=34.8
Q ss_pred HHHHHHHHHcCCCEEEEecCCH--------HHHHHHHHHHHHhhcCCCCcceeeccCCCH
Q 006566 121 VEEVMRIADQGADLVRITVQGK--------READACFEIKNSLVQKNYNIPLVADIHFAP 172 (640)
Q Consensus 121 v~Qi~rl~~aGceiVRvtvp~~--------~~A~~l~~I~~~L~~~g~~iPLVADIHF~~ 172 (640)
.+.+..|.++|+..||+.+.-. ...+.|.++.+.+.+.|+- +|-|.|-.+
T Consensus 88 ~~di~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~--Vild~H~~~ 145 (359)
T 4hty_A 88 KKHFEVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNELGIY--TILDWHSIG 145 (359)
T ss_dssp HHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEEEECCEE
T ss_pred HHHHHHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHCCCE--EEEEcCCCC
Confidence 3456778999999999986532 2344556677777776654 678888643
No 495
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=38.16 E-value=57 Score=35.01 Aligned_cols=68 Identities=10% Similarity=0.229 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhhcCCCCcceeeccCCC-HHHHHHHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhH
Q 006566 144 EADACFEIKNSLVQKNYNIPLVADIHFA-PSVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVF 220 (640)
Q Consensus 144 ~A~~l~~I~~~L~~~g~~iPLVADIHF~-~~~Al~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f 220 (640)
+-+.++++++ .+++|+.+|=+.. +.-+..+++ .++=|.+.|...|.-.. .
T Consensus 269 ~~~~~~~l~~-----~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d~~~~GGite----------------------a 321 (441)
T 3vc5_A 269 GIDGMARVAA-----EVPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLVR----------------------S 321 (441)
T ss_dssp SHHHHHHHHT-----TSSSCEEESSSCCSGGGHHHHHHHCCCSEEEECHHHHTSHHH----------------------H
T ss_pred CHHHHHHHHh-----cCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeechhhcCCHHH----------------------H
Confidence 3455666665 4889999996543 444444444 48889999988886332 6
Q ss_pred HHHHHHHHHcCCeEEEee
Q 006566 221 SPLVEKCKKYGRAVRIGT 238 (640)
Q Consensus 221 ~~lV~~~Ke~g~aIRIGv 238 (640)
..+...|+++|+++=++.
T Consensus 322 ~kia~lA~~~gv~v~~h~ 339 (441)
T 3vc5_A 322 AHIATLCATFGIELSMHS 339 (441)
T ss_dssp HHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHcCCEEEecC
Confidence 789999999999875544
No 496
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=38.14 E-value=78 Score=34.39 Aligned_cols=91 Identities=15% Similarity=0.097 Sum_probs=59.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCC-CcceeeccCCC-HHHHHHHhh--hcCceeeCCCC
Q 006566 116 DVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNY-NIPLVADIHFA-PSVALRVAE--CFDKIRVNPGN 191 (640)
Q Consensus 116 Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~-~iPLVADIHF~-~~~Al~Aa~--~v~KVRINPGN 191 (640)
+.+.+++-+++|.+.|.+.+==-++ .++.+.++.++++ + .+|+.+|=++. +.-+..+++ +++-|++.|..
T Consensus 228 t~~~Ai~~~~~Le~~~l~~iEEPl~-~dd~~~la~L~~~-----~~~iPIA~gEs~~s~~d~~~li~~~avDiiq~d~~~ 301 (455)
T 3fxg_A 228 NVSYTIELVKACLDLNINWWEECLS-PDDTDGFALIKRA-----HPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQPDVMW 301 (455)
T ss_dssp CHHHHHHHHHHTGGGCCSEEECCSC-GGGGGGHHHHHHH-----CTTSEEEECTTCCHHHHHHHHHTTCCCSEECCCTTT
T ss_pred CHHHHHHHHHhcccCCcceecCCCC-cchHHHHHHHHHh-----CCCCeEECCCccCCHHHHHHHHHcCCCCEEEECccc
Confidence 4455555555555555544432222 2345566666664 4 48999998765 333444444 49999999999
Q ss_pred CCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeE
Q 006566 192 FADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAV 234 (640)
Q Consensus 192 ~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aI 234 (640)
.|.-.. ...+...|+.+|+++
T Consensus 302 ~GGIte----------------------a~kIa~lA~a~Gv~v 322 (455)
T 3fxg_A 302 LGGLTE----------------------LLKVAALAAAYDVPV 322 (455)
T ss_dssp SSCHHH----------------------HHHHHHHHHTTTCCB
T ss_pred cCCHHH----------------------HHHHHHHHHHcCCEE
Confidence 987442 678999999999998
No 497
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=38.04 E-value=63 Score=33.33 Aligned_cols=68 Identities=21% Similarity=0.183 Sum_probs=49.7
Q ss_pred HHHHHHHHHHcCCCEEEEecC------C------------HHHHHHHHHHHHHhhcCCCCcceeeccCC-CHHHHHHHhh
Q 006566 120 TVEEVMRIADQGADLVRITVQ------G------------KREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAE 180 (640)
Q Consensus 120 tv~Qi~rl~~aGceiVRvtvp------~------------~~~A~~l~~I~~~L~~~g~~iPLVADIHF-~~~~Al~Aa~ 180 (640)
++++++++.++|+|+|=+.-+ + ....+.+++|++. .++|++|+-=. ++.-+..+++
T Consensus 154 t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~-----~~iPViaaGGI~~~~~~~~~l~ 228 (369)
T 3bw2_A 154 TPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREA-----VDIPVVAAGGIMRGGQIAAVLA 228 (369)
T ss_dssp SHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHH-----CSSCEEEESSCCSHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHh-----cCceEEEECCCCCHHHHHHHHH
Confidence 456788999999999988432 1 1125667788775 68999999988 8998888887
Q ss_pred h-cCceeeCCCCC
Q 006566 181 C-FDKIRVNPGNF 192 (640)
Q Consensus 181 ~-v~KVRINPGN~ 192 (640)
. ++-|=+-=+-+
T Consensus 229 ~GAd~V~vGs~~~ 241 (369)
T 3bw2_A 229 AGADAAQLGTAFL 241 (369)
T ss_dssp TTCSEEEESHHHH
T ss_pred cCCCEEEEChHHh
Confidence 7 77766543333
No 498
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=37.99 E-value=1.9e+02 Score=30.06 Aligned_cols=25 Identities=12% Similarity=-0.035 Sum_probs=14.2
Q ss_pred HHHHHHHHHHc-CCeEE-EeeCCCCCc
Q 006566 220 FSPLVEKCKKY-GRAVR-IGTNHGSLS 244 (640)
Q Consensus 220 f~~lV~~~Ke~-g~aIR-IGvNhGSLs 244 (640)
+.++++.+++. ++.++ |-+.-||-.
T Consensus 189 ~~~~~~~~~~~~~l~l~Gl~~H~gs~~ 215 (434)
T 1twi_A 189 AMKAIKMALEMEYVNVVGVHCHIGSQL 215 (434)
T ss_dssp HHHHHHHHHHCSSEEEEEEECCCCSSB
T ss_pred HHHHHHHHHhCCCCCEEEEEEECCCCC
Confidence 55677788876 55432 333337753
No 499
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=37.89 E-value=1.6e+02 Score=30.02 Aligned_cols=78 Identities=13% Similarity=0.096 Sum_probs=53.5
Q ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHHhhcCCCCcceeeccCCCHHHHHHHhhh
Q 006566 102 HPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAEC 181 (640)
Q Consensus 102 ~PI~VQSMt~t~T~Dv~atv~Qi~rl~~aGceiVRvtvp~~~~A~~l~~I~~~L~~~g~~iPLVADIHF~~~~Al~Aa~~ 181 (640)
.|+-|+-|...+ + .-+++..+.++|+++|-+..-.. .+-++.+++ ..+|++..++ ++..|..+.+.
T Consensus 78 ~p~gVnl~~~~~--~---~~~~~~~~~~~g~d~V~l~~g~p--~~~~~~l~~------~g~~v~~~v~-s~~~a~~a~~~ 143 (326)
T 3bo9_A 78 KPFGVNIILVSP--W---ADDLVKVCIEEKVPVVTFGAGNP--TKYIRELKE------NGTKVIPVVA-SDSLARMVERA 143 (326)
T ss_dssp SCEEEEEETTST--T---HHHHHHHHHHTTCSEEEEESSCC--HHHHHHHHH------TTCEEEEEES-SHHHHHHHHHT
T ss_pred CCEEEEEeccCC--C---HHHHHHHHHHCCCCEEEECCCCc--HHHHHHHHH------cCCcEEEEcC-CHHHHHHHHHc
Confidence 466666665322 2 34566777889999999987554 334455554 4688888885 68888888888
Q ss_pred -cCceeeCCCCCC
Q 006566 182 -FDKIRVNPGNFA 193 (640)
Q Consensus 182 -v~KVRINPGN~~ 193 (640)
+|-|=+.....+
T Consensus 144 GaD~i~v~g~~~G 156 (326)
T 3bo9_A 144 GADAVIAEGMESG 156 (326)
T ss_dssp TCSCEEEECTTSS
T ss_pred CCCEEEEECCCCC
Confidence 999998543333
No 500
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=37.83 E-value=41 Score=34.93 Aligned_cols=57 Identities=9% Similarity=0.085 Sum_probs=43.8
Q ss_pred CCCcceeeccCC-CHHHHHHHhh--hcCceeeCCCCCCchhhhccccccchHHHHHHHhhhHhhHHHHHHHHHHcCCeEE
Q 006566 159 NYNIPLVADIHF-APSVALRVAE--CFDKIRVNPGNFADRRAQFEQLEYTDDEYQKELQHIEEVFSPLVEKCKKYGRAVR 235 (640)
Q Consensus 159 g~~iPLVADIHF-~~~~Al~Aa~--~v~KVRINPGN~~d~~k~F~~~eYtdeeY~~Ele~I~~~f~~lV~~~Ke~g~aIR 235 (640)
.+++|+++|=.+ ++.-...+++ +++-|.|.|...|.-.. ...+++.|+++|+++=
T Consensus 250 ~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~----------------------~~~i~~~A~~~gi~~~ 307 (386)
T 1wue_A 250 ELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHE----------------------ALKIAAFCQENDLLVW 307 (386)
T ss_dssp TCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHH----------------------HHHHHHHHHHTTCEEE
T ss_pred hcCCCEEeCCccCCHHHHHHHHHcCCCCEEEEchhhhCCHHH----------------------HHHHHHHHHHCCCeEE
Confidence 468999999654 5665666664 49999999999887442 6789999999999985
Q ss_pred Ee
Q 006566 236 IG 237 (640)
Q Consensus 236 IG 237 (640)
+|
T Consensus 308 ~~ 309 (386)
T 1wue_A 308 LG 309 (386)
T ss_dssp EC
T ss_pred EC
Confidence 44
Done!