Query 006569
Match_columns 640
No_of_seqs 357 out of 1680
Neff 5.9
Searched_HMMs 46136
Date Thu Mar 28 11:19:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006569.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006569hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0520 Uncharacterized conser 100.0 1E-106 2E-111 922.2 28.4 608 1-629 5-667 (975)
2 PF03859 CG-1: CG-1 domain; I 100.0 4.4E-63 9.6E-68 443.0 9.7 117 25-142 2-118 (118)
3 KOG4412 26S proteasome regulat 99.7 4.4E-16 9.5E-21 150.0 10.4 120 509-631 74-200 (226)
4 cd01175 IPT_COE IPT domain of 99.5 3.2E-14 7E-19 120.5 8.8 82 365-453 1-84 (85)
5 KOG4412 26S proteasome regulat 99.5 8.5E-14 1.8E-18 134.4 8.2 120 514-635 45-176 (226)
6 PF12796 Ank_2: Ankyrin repeat 99.4 4.2E-13 9.2E-18 115.1 9.9 86 540-632 1-88 (89)
7 KOG0509 Ankyrin repeat and DHH 99.4 3.7E-13 8E-18 149.8 8.9 104 534-640 76-188 (600)
8 PF13637 Ank_4: Ankyrin repeat 99.3 2.1E-12 4.5E-17 101.8 6.6 54 570-623 1-54 (54)
9 KOG0512 Fetal globin-inducing 99.3 1.6E-12 3.5E-17 124.8 6.6 95 536-633 63-160 (228)
10 PHA02791 ankyrin-like protein; 99.3 6.1E-12 1.3E-16 132.1 10.3 111 514-627 37-152 (284)
11 PHA02791 ankyrin-like protein; 99.3 1.2E-11 2.5E-16 130.0 11.2 117 511-632 98-223 (284)
12 PHA02743 Viral ankyrin protein 99.3 2.2E-11 4.8E-16 117.6 10.8 98 534-634 55-159 (166)
13 PHA02875 ankyrin repeat protei 99.3 2.3E-11 4.9E-16 132.7 11.6 112 516-630 111-229 (413)
14 PHA02741 hypothetical protein; 99.3 2.3E-11 4.9E-16 117.6 9.8 112 514-628 28-157 (169)
15 KOG4214 Myotrophin and similar 99.2 1.6E-11 3.5E-16 107.2 6.9 76 559-635 24-99 (117)
16 KOG0508 Ankyrin repeat protein 99.2 1.3E-11 2.8E-16 133.2 7.3 111 514-627 91-207 (615)
17 PHA02875 ankyrin repeat protei 99.2 5.1E-11 1.1E-15 129.9 12.0 117 512-631 73-196 (413)
18 PHA02736 Viral ankyrin protein 99.2 1.9E-11 4E-16 115.8 7.4 92 535-629 54-152 (154)
19 KOG0515 p53-interacting protei 99.2 1.4E-11 3.1E-16 133.9 6.8 90 540-631 554-644 (752)
20 PHA02795 ankyrin-like protein; 99.2 4.6E-11 1E-15 131.5 10.8 114 513-629 155-288 (437)
21 PHA02859 ankyrin repeat protei 99.2 8.5E-11 1.8E-15 117.8 10.6 111 518-631 64-187 (209)
22 PF01833 TIG: IPT/TIG domain; 99.2 5.7E-11 1.2E-15 100.6 7.9 84 365-452 1-85 (85)
23 PHA02878 ankyrin repeat protei 99.2 9.1E-11 2E-15 130.9 11.7 109 521-632 148-264 (477)
24 PHA02741 hypothetical protein; 99.2 1.6E-10 3.5E-15 111.7 11.7 98 534-631 19-127 (169)
25 PHA02743 Viral ankyrin protein 99.2 7.2E-11 1.6E-15 114.1 9.2 97 535-631 19-123 (166)
26 PHA03100 ankyrin repeat protei 99.2 1.3E-10 2.9E-15 128.7 12.0 117 511-630 180-310 (480)
27 PHA02859 ankyrin repeat protei 99.2 1.7E-10 3.7E-15 115.6 11.0 94 534-630 49-152 (209)
28 PHA03095 ankyrin-like protein; 99.2 1.6E-10 3.5E-15 127.6 11.9 111 519-629 201-316 (471)
29 PHA02874 ankyrin repeat protei 99.2 1.2E-10 2.6E-15 128.3 10.8 91 536-629 124-216 (434)
30 PHA02874 ankyrin repeat protei 99.2 1.7E-10 3.7E-15 127.1 11.8 118 513-635 130-258 (434)
31 PF13857 Ank_5: Ankyrin repeat 99.2 3.7E-11 8.1E-16 95.8 4.8 50 561-610 7-56 (56)
32 KOG0509 Ankyrin repeat and DHH 99.1 1E-10 2.2E-15 130.5 9.8 117 514-633 85-208 (600)
33 PHA02736 Viral ankyrin protein 99.1 5E-11 1.1E-15 112.9 6.3 97 534-630 15-120 (154)
34 PLN03192 Voltage-dependent pot 99.1 2.8E-10 6.2E-15 135.4 11.7 117 513-632 531-684 (823)
35 PHA02798 ankyrin-like protein; 99.1 2.9E-10 6.2E-15 127.4 10.9 113 517-632 48-177 (489)
36 PHA02946 ankyin-like protein; 99.1 5E-10 1.1E-14 124.6 11.5 90 535-628 71-165 (446)
37 PHA03095 ankyrin-like protein; 99.1 5E-10 1.1E-14 123.7 11.0 109 519-630 62-181 (471)
38 PHA03100 ankyrin repeat protei 99.1 4.5E-10 9.8E-15 124.5 10.6 116 514-632 80-205 (480)
39 PHA02989 ankyrin repeat protei 99.1 5E-10 1.1E-14 125.7 11.0 112 517-631 47-175 (494)
40 PHA02884 ankyrin repeat protei 99.1 5.3E-10 1.2E-14 118.2 10.4 116 517-635 43-169 (300)
41 PHA02878 ankyrin repeat protei 99.1 4.8E-10 1.1E-14 125.1 10.7 116 511-631 172-295 (477)
42 KOG0510 Ankyrin repeat protein 99.1 2E-10 4.3E-15 130.7 7.5 121 510-631 276-405 (929)
43 cd01179 IPT_plexin_repeat2 Sec 99.0 1.4E-09 3E-14 94.1 9.7 84 365-454 1-85 (85)
44 KOG4177 Ankyrin [Cell wall/mem 99.0 8.9E-10 1.9E-14 131.6 11.4 111 515-628 482-598 (1143)
45 KOG0508 Ankyrin repeat protein 99.0 2.5E-10 5.5E-15 123.4 6.0 122 510-634 45-181 (615)
46 PHA02884 ankyrin repeat protei 99.0 1.2E-09 2.6E-14 115.6 10.7 94 536-632 32-133 (300)
47 PHA02716 CPXV016; CPX019; EVM0 99.0 1.3E-09 2.9E-14 127.3 11.4 90 518-610 153-254 (764)
48 KOG0514 Ankyrin repeat protein 99.0 8E-10 1.7E-14 116.5 8.5 107 520-626 281-396 (452)
49 PHA02795 ankyrin-like protein; 99.0 1.3E-09 2.9E-14 120.1 10.3 113 517-632 128-250 (437)
50 PHA02730 ankyrin-like protein; 99.0 8.8E-10 1.9E-14 126.8 9.1 64 565-628 36-104 (672)
51 PLN03192 Voltage-dependent pot 99.0 1E-09 2.2E-14 130.7 10.0 89 536-627 525-615 (823)
52 KOG0502 Integral membrane anky 99.0 5.5E-10 1.2E-14 111.1 5.8 95 534-631 158-254 (296)
53 cd00102 IPT Immunoglobulin-lik 99.0 3.1E-09 6.7E-14 91.2 9.5 84 365-453 1-88 (89)
54 PHA02989 ankyrin repeat protei 99.0 3.4E-09 7.3E-14 119.0 12.0 71 558-628 244-314 (494)
55 PHA02798 ankyrin-like protein; 99.0 3.1E-09 6.7E-14 119.1 11.6 114 517-630 196-318 (489)
56 KOG0195 Integrin-linked kinase 99.0 1.2E-09 2.6E-14 112.1 7.4 95 532-629 30-126 (448)
57 PTZ00322 6-phosphofructo-2-kin 98.9 2.3E-09 4.9E-14 124.9 10.4 85 538-625 84-170 (664)
58 KOG4177 Ankyrin [Cell wall/mem 98.9 1.7E-09 3.7E-14 129.3 9.2 112 514-628 514-631 (1143)
59 PHA02716 CPXV016; CPX019; EVM0 98.9 2.8E-09 6.1E-14 124.6 10.7 94 534-630 210-346 (764)
60 PHA02946 ankyin-like protein; 98.9 4.1E-09 8.9E-14 117.3 11.6 117 510-630 75-202 (446)
61 PHA02876 ankyrin repeat protei 98.9 3.4E-09 7.3E-14 123.5 10.8 94 535-631 374-471 (682)
62 PHA02730 ankyrin-like protein; 98.9 7E-09 1.5E-13 119.5 9.7 70 559-628 451-523 (672)
63 PHA02876 ankyrin repeat protei 98.8 1.2E-08 2.6E-13 118.9 11.7 92 535-629 340-435 (682)
64 COG0666 Arp FOG: Ankyrin repea 98.8 1.3E-08 2.8E-13 98.1 9.7 94 536-632 73-176 (235)
65 PHA02917 ankyrin-like protein; 98.8 1.2E-08 2.5E-13 118.9 10.8 112 514-629 110-256 (661)
66 cd00204 ANK ankyrin repeats; 98.8 2.5E-08 5.5E-13 87.5 10.2 89 535-626 6-96 (126)
67 KOG1710 MYND Zn-finger and ank 98.8 9.2E-09 2E-13 105.8 8.1 98 534-633 10-109 (396)
68 PHA02792 ankyrin-like protein; 98.8 1.5E-08 3.2E-13 115.9 10.1 110 519-631 320-438 (631)
69 KOG0505 Myosin phosphatase, re 98.8 6.3E-09 1.4E-13 114.4 6.3 76 549-628 181-256 (527)
70 TIGR00870 trp transient-recept 98.8 2.3E-08 5E-13 117.8 11.3 118 513-630 59-202 (743)
71 PHA02917 ankyrin-like protein; 98.8 3E-08 6.5E-13 115.5 11.2 73 557-629 439-512 (661)
72 KOG0505 Myosin phosphatase, re 98.7 1.4E-08 3E-13 111.8 6.7 95 538-635 42-138 (527)
73 KOG0512 Fetal globin-inducing 98.7 2.6E-08 5.7E-13 96.2 7.6 87 534-623 95-184 (228)
74 KOG0510 Ankyrin repeat protein 98.7 3.6E-08 7.8E-13 112.7 9.2 93 535-630 272-368 (929)
75 PF12796 Ank_2: Ankyrin repeat 98.7 3E-08 6.6E-13 84.9 6.4 55 574-632 1-55 (89)
76 COG0666 Arp FOG: Ankyrin repea 98.7 8.3E-08 1.8E-12 92.4 9.8 97 527-626 97-203 (235)
77 KOG0502 Integral membrane anky 98.6 4.2E-08 9E-13 97.9 6.4 92 536-630 129-220 (296)
78 PF13857 Ank_5: Ankyrin repeat 98.6 1.8E-08 3.9E-13 80.3 3.1 45 589-633 1-46 (56)
79 PHA02792 ankyrin-like protein; 98.6 8.7E-08 1.9E-12 109.7 9.5 113 514-629 346-479 (631)
80 KOG0705 GTPase-activating prot 98.6 1.1E-07 2.5E-12 105.0 8.2 91 536-627 624-718 (749)
81 cd00603 IPT_PCSR IPT domain of 98.6 3.2E-07 7E-12 79.5 9.5 85 365-453 1-89 (90)
82 KOG0195 Integrin-linked kinase 98.5 1E-07 2.2E-12 98.2 6.0 65 566-630 30-94 (448)
83 smart00429 IPT ig-like, plexin 98.5 3.3E-07 7.3E-12 79.3 8.2 84 365-453 2-90 (90)
84 cd01180 IPT_plexin_repeat1 Fir 98.5 4E-07 8.7E-12 80.4 8.8 88 365-454 1-94 (94)
85 KOG0514 Ankyrin repeat protein 98.5 2.5E-07 5.5E-12 98.0 8.7 89 534-625 338-429 (452)
86 PF13606 Ank_3: Ankyrin repeat 98.5 1.1E-07 2.3E-12 66.7 2.9 28 602-629 1-28 (30)
87 cd00204 ANK ankyrin repeats; 98.5 1.7E-06 3.6E-11 75.9 11.0 87 534-623 38-126 (126)
88 KOG0507 CASK-interacting adapt 98.4 1.6E-07 3.5E-12 106.8 3.7 94 536-632 49-144 (854)
89 TIGR00870 trp transient-recept 98.3 8.7E-07 1.9E-11 104.5 8.2 91 535-628 127-242 (743)
90 PF00023 Ank: Ankyrin repeat H 98.3 4.4E-07 9.4E-12 64.5 2.8 30 602-631 1-30 (33)
91 KOG0783 Uncharacterized conser 98.3 3.3E-07 7.2E-12 104.7 2.6 65 564-628 46-111 (1267)
92 PF00023 Ank: Ankyrin repeat H 98.3 1.1E-06 2.3E-11 62.4 4.2 33 569-601 1-33 (33)
93 cd01181 IPT_plexin_repeat3 Thi 98.3 3.3E-06 7.1E-11 75.5 8.1 73 365-440 1-81 (99)
94 PTZ00322 6-phosphofructo-2-kin 98.2 1.3E-06 2.8E-11 102.1 6.2 61 572-632 84-144 (664)
95 cd02849 CGTase_C_term Cgtase ( 98.2 6.5E-06 1.4E-10 71.0 8.7 79 365-452 3-81 (81)
96 KOG1710 MYND Zn-finger and ank 98.2 5.5E-06 1.2E-10 85.7 9.1 89 533-624 42-133 (396)
97 PF13606 Ank_3: Ankyrin repeat 98.2 2E-06 4.3E-11 60.3 4.0 30 569-598 1-30 (30)
98 KOG0818 GTPase-activating prot 98.2 1.2E-05 2.6E-10 88.0 12.0 98 537-635 134-232 (669)
99 KOG0522 Ankyrin repeat protein 98.2 4.9E-06 1.1E-10 91.9 8.4 64 562-625 47-110 (560)
100 KOG3676 Ca2+-permeable cation 98.0 9.7E-06 2.1E-10 93.5 7.0 98 535-632 142-269 (782)
101 KOG0515 p53-interacting protei 97.9 2.7E-05 6E-10 85.9 8.5 120 517-639 560-690 (752)
102 PF13637 Ank_4: Ankyrin repeat 97.9 2.9E-05 6.3E-10 60.9 6.2 52 536-590 1-54 (54)
103 cd00604 IPT_CGTD IPT domain (d 97.9 7.6E-05 1.7E-09 64.4 8.8 80 365-453 1-80 (81)
104 KOG0507 CASK-interacting adapt 97.8 1.7E-05 3.8E-10 90.7 5.6 117 506-625 48-170 (854)
105 KOG3676 Ca2+-permeable cation 97.7 6.7E-05 1.5E-09 86.8 8.1 90 536-628 184-298 (782)
106 KOG0506 Glutaminase (contains 97.7 2.7E-05 5.8E-10 85.1 4.5 85 536-624 506-594 (622)
107 KOG0506 Glutaminase (contains 97.7 1.9E-05 4.2E-10 86.2 3.1 70 566-635 502-577 (622)
108 KOG0511 Ankyrin repeat protein 97.7 5.2E-05 1.1E-09 81.0 5.8 57 571-627 37-93 (516)
109 KOG0782 Predicted diacylglycer 97.6 0.00012 2.5E-09 81.4 6.7 90 538-628 868-959 (1004)
110 KOG4369 RTK signaling protein 97.5 4.2E-05 9E-10 90.1 2.1 70 558-627 778-848 (2131)
111 KOG4214 Myotrophin and similar 97.5 0.00025 5.4E-09 62.7 6.3 71 535-608 33-105 (117)
112 KOG4369 RTK signaling protein 97.4 9E-05 1.9E-09 87.5 2.9 120 512-634 762-888 (2131)
113 KOG2384 Major histocompatibili 97.2 0.00066 1.4E-08 67.0 6.2 65 561-625 3-68 (223)
114 KOG0521 Putative GTPase activa 96.6 0.00093 2E-08 79.3 2.3 66 568-633 654-719 (785)
115 smart00248 ANK ankyrin repeats 96.4 0.0038 8.3E-08 39.8 3.1 28 602-629 1-28 (30)
116 KOG0818 GTPase-activating prot 96.4 0.0042 9.1E-08 68.7 5.1 64 566-629 123-193 (669)
117 KOG0783 Uncharacterized conser 96.1 0.0049 1.1E-07 71.7 4.1 74 536-612 52-128 (1267)
118 KOG3609 Receptor-activated Ca2 95.7 0.0086 1.9E-07 70.2 4.0 59 571-629 89-157 (822)
119 cd01178 IPT_NFAT IPT domain of 95.7 0.031 6.8E-07 50.2 6.6 82 364-453 1-100 (101)
120 KOG0522 Ankyrin repeat protein 95.6 0.0089 1.9E-07 66.8 3.6 61 572-632 22-84 (560)
121 KOG0521 Putative GTPase activa 95.6 0.012 2.5E-07 70.2 4.6 88 535-625 655-744 (785)
122 KOG0520 Uncharacterized conser 95.5 0.15 3.3E-06 61.2 13.5 68 560-627 631-704 (975)
123 KOG3610 Plexins (functional se 95.4 0.038 8.2E-07 67.0 8.2 88 362-454 140-230 (1025)
124 smart00248 ANK ankyrin repeats 95.4 0.028 6E-07 35.6 4.0 29 569-597 1-29 (30)
125 cd00602 IPT_TF IPT domain of e 95.1 0.086 1.9E-06 47.5 7.4 82 366-453 2-100 (101)
126 KOG0511 Ankyrin repeat protein 94.4 0.11 2.4E-06 56.3 7.4 82 537-624 37-120 (516)
127 KOG0782 Predicted diacylglycer 93.9 0.099 2.1E-06 59.0 6.0 86 537-625 900-989 (1004)
128 KOG0705 GTPase-activating prot 93.4 0.09 1.9E-06 59.6 4.7 58 574-631 628-689 (749)
129 cd01176 IPT_RBP-Jkappa IPT dom 93.1 0.3 6.6E-06 43.0 6.4 66 381-453 20-96 (97)
130 cd01177 IPT_NFkappaB IPT domai 92.3 0.58 1.3E-05 42.2 7.4 82 366-453 2-101 (102)
131 PF08549 SWI-SNF_Ssr4: Fungal 91.9 0.37 8.1E-06 55.9 7.1 101 33-143 30-155 (669)
132 KOG2505 Ankyrin repeat protein 90.7 0.23 5E-06 55.6 3.8 46 566-611 426-471 (591)
133 KOG2505 Ankyrin repeat protein 87.1 0.88 1.9E-05 51.2 5.1 49 583-631 404-458 (591)
134 KOG3609 Receptor-activated Ca2 78.3 6.6 0.00014 47.0 8.0 83 511-597 66-158 (822)
135 PF03158 DUF249: Multigene fam 71.2 6 0.00013 39.5 4.6 46 573-624 146-191 (192)
136 KOG3610 Plexins (functional se 59.5 11 0.00024 46.6 4.6 76 361-437 46-125 (1025)
137 PF06128 Shigella_OspC: Shigel 57.7 17 0.00036 37.7 4.9 46 582-627 229-278 (284)
138 PF11929 DUF3447: Domain of un 49.9 30 0.00064 29.1 4.5 48 571-625 7-54 (76)
139 PF14545 DBB: Dof, BCAP, and B 39.1 89 0.0019 30.1 6.4 76 370-453 3-87 (142)
140 KOG2384 Major histocompatibili 38.1 65 0.0014 32.7 5.4 67 536-605 12-81 (223)
141 PF03106 WRKY: WRKY DNA -bindi 37.6 14 0.00031 30.2 0.7 8 76-83 2-9 (60)
142 PF09099 Qn_am_d_aIII: Quinohe 32.6 1.1E+02 0.0023 26.8 5.2 64 365-437 2-70 (81)
143 smart00774 WRKY DNA binding do 30.1 20 0.00043 29.4 0.4 15 76-91 2-16 (59)
144 PF05587 Anth_Ig: Anthrax rece 28.6 19 0.00041 32.9 0.0 76 365-442 6-88 (105)
145 KOG3743 Recombination signal b 25.1 79 0.0017 36.5 4.0 70 378-454 505-585 (622)
146 KOG3836 HLH transcription fact 23.2 20 0.00044 41.6 -1.0 56 577-632 403-458 (605)
147 COG3514 Uncharacterized protei 20.9 32 0.00069 30.7 -0.1 23 64-86 60-82 (93)
148 PF01913 FTR: Formylmethanofur 20.4 42 0.00091 32.3 0.6 20 69-89 119-138 (144)
No 1
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=100.00 E-value=1e-106 Score=922.16 Aligned_cols=608 Identities=37% Similarity=0.561 Sum_probs=421.7
Q ss_pred CccccccccccCCCCCchhhHHHHHHHHHHhcCChhHHHHHHhCCCcceeccCCCCCCCCccEEEeehhhhhhccccCcc
Q 006569 1 MAELLVGSEIHGFHTLKDLDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHN 80 (640)
Q Consensus 1 ~~~~~~~~e~~~~~~~~~~d~~~~~~~~~~rwl~~~ei~~il~~~~~~~~~~~~~~~p~~g~~~l~~r~~~~~fr~dg~~ 80 (640)
+++++..++++.|.+.+.||+..+++++++|||+|+||+.||+||++|.|+.+||+||.+||+||||||+|||||||||+
T Consensus 5 ~~n~~~is~~l~~~sl~~l~~~~ll~~~~~rWl~~~EI~~il~n~~~~~lt~~s~trp~sGS~flfnRk~lr~fRKDGh~ 84 (975)
T KOG0520|consen 5 SSNRHIISIILPFKSLQDLDIQTLLPEAKSRWLTPEEILAILINHEKFTLTVSSPTRPQSGSIFLFNRKVLRYFRKDGHN 84 (975)
T ss_pred cccccccceeechhhhhhhhhhhhhHHHHhccCChHHHHHHHhcccccccccCCCCCCCCCceeeeccHHHHHHhhcchh
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceecCCCCchhhhhhhcccCCEeeEEEEeeecCCCCccceeeeecccCCCCceEEEeccccCCCCCC----CCCCCCCCC
Q 006569 81 WKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETHEGTPA----TPPNSHSSS 156 (640)
Q Consensus 81 w~kkk~g~~~~e~h~~lkv~~~~~~~~~y~~~~~~~~f~rr~y~~~~~~~~~ivlvhy~~~~~g~~~----~~~~s~~~~ 156 (640)
|||||||||||||||||||||+|+||||||||+++|||||||||||++.++||||||||||++.+.. .+..+ +.
T Consensus 85 WkKkkDGKtirEaHe~LKvg~~~~l~~~Y~Hg~~~ptF~RRcYwllq~~~~hIVLVHYl~v~~~~~~~~~~~~~~~--s~ 162 (975)
T KOG0520|consen 85 WKKKKDGKTIREAHEKLKVGGVEVLHCYYAHGEINPTFQRRCYWLLQQELEHIVLVHYLNVKGNEDAAKGAGEIFS--SI 162 (975)
T ss_pred hhhcCCCCcChHHHHhhccCCccceeeeeecccccchHHHHHHHhhccccCceEEEEEeecccccccccCcccccc--cc
Confidence 9999999999999999999999999999999999999999999999999999999999999984422 11111 11
Q ss_pred CCCC----------CCC-----ccccccccCCCCcccCCCCccccCCCCCccccccccccccccccc-cccccccCCCCC
Q 006569 157 ISDQ----------SAP-----LLLSEEFNSGAGHAYSAGGKELQAPNESLTVQNHEMRLHELNTLE-WDDLVVTNDSND 220 (640)
Q Consensus 157 ~~~~----------~~~-----~~~~e~~~s~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~ 220 (640)
.++. ++| ....++.+++.+.+ ....-....+ ...+|..++++.++.+ |..+..+.+...
T Consensus 163 ~sd~~~S~~~~~~q~~~~~~~~~s~~~~v~~i~s~~----~~~~~g~~~~-~s~~h~i~~~~~~s~~~~~~~p~s~~s~~ 237 (975)
T KOG0520|consen 163 ISDKAWSLNQLAGQLSPIFHNHSSVNEDVAEINSNQ----TGNALGSVFG-NSRNHRIRLHEVNSLDPLYKLPVSDDSLN 237 (975)
T ss_pred cccccccHHHhhcccCcchhcccchHHHHHHHhhhc----cccccccccC-cchhhhhcccccCCccccccccccCCccc
Confidence 1111 111 11223333322110 0000000001 1224666777776665 888776554322
Q ss_pred CCCCCCCCCc------ccccccccc-----ccCCCCCCCCCCCCC-CccccccCCccCCCCccccccCCcccCCCccccc
Q 006569 221 STEPRGDKFS------HFDQQNHTA-----IKGAASNGSFFPSHD-SYAEVSSGGCLTSLSQPIDRSNNTQFNNLDGVYS 288 (640)
Q Consensus 221 ~~~~~~~~~~------~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (640)
...+.....+ ...+.+... +|.+......+++.. ....|- .+..+..+..... +..+.+.+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~rs~~~s~~te~l~n~~~~~~~~g~s~s~~l~~i~---~~~~~~~~~~~~p--~~~nf~~~ss 312 (975)
T KOG0520|consen 238 LSAPKPIDLPKGPTSVKQRSSSPSYFTEILGNAPSGLVSQGNSLSSSLQRIS---SFTGLDNAAYEQP--NSQNFEPNSS 312 (975)
T ss_pred cccCCCcccccCCcchhhcCCCCcchhhhcccCCCcccccccccccchhhcc---cccccccccccCC--cccccccccc
Confidence 2222111000 000000000 000000000001000 000000 0111100000000 0011112222
Q ss_pred ccccccCcccccc--ccCC-ccccCCc----cc-ccccCCCCCcCchhhhhhhhh--CCCC-----CCCCCCCCCCCCCC
Q 006569 289 ELMGTQSSVSSQR--NEFG-EVCTGDS----LD-ILAGDGLQSQDSFGKWMNYIM--TDSP-----GSVDDPVLEPSISS 353 (640)
Q Consensus 289 ~~~~~~~~~~~~~--~~~~-~~~~~~~----~~-~~~~~~l~~~dsf~~w~~~~~--~~s~-----~~~~~~~~~~~~~~ 353 (640)
+..+..+....+. ++++ ......+ .+ .+.++|+++.|+|++||+..+ .|.. +..-.++.+...+.
T Consensus 313 ~~s~~~~~~~g~g~~~~~~sa~~~~~P~~~~~~~~~~~~~l~sgdsf~~~~~t~~e~~d~~q~~s~~~~~~p~~~~~~~~ 392 (975)
T KOG0520|consen 313 LNSHVTGQSYGQGLQARSPSATSESRPITSAADAALSELGLKSGDSFSRWASTFGEISDLGQDPSGEAVWTPENDPMGPP 392 (975)
T ss_pred CCCCccccccCccccCCCcccccccCCcchhhccccccccccccccccchhhhhcccccCCCCCccccccccCCCcCCCc
Confidence 2222222211111 1111 1111122 22 245789999999999998632 1111 11111121222222
Q ss_pred --CCCCCCCCCccceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCCCce
Q 006569 354 --GHHQFTVPEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGL 431 (640)
Q Consensus 354 --~~~~s~~q~qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~pG~ 431 (640)
.+++| +++|+|+|+||||+|+|++||+||||+|.+- +..+++|+||||+++|||++||+|||||+||||.||+
T Consensus 393 ~s~~~~S-~p~qlf~I~DfSP~Wsy~~ggvKVlV~G~~~----~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~ 467 (975)
T KOG0520|consen 393 GSFLSPS-SPEQLFTITDFSPEWSYLDGGVKVLVTGFPQ----DETRSNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGV 467 (975)
T ss_pred ccccCCC-CCcceeeeeccCcccccCCCCcEEEEecCcc----ccCCCceEEEeCCccccHHHhhcceeeeecCccCCCe
Confidence 45555 4499999999999999999999999999732 3468899999999999999999999999999999999
Q ss_pred eEEEEEeC-CCCCcccceeeeecCCCCCCCCCcccccchhHHHHHHHHHHHHhhccCCCcccccCCCCCCChHHHhh--h
Q 006569 432 FLLYMSLD-GHKPISQVLNFEYRSPQLHAPVASSEDKSKWEEFQVQMRLAHLLFSSFKGLNILSSKVPPNSLKEAKK--F 508 (640)
Q Consensus 432 Vpl~Vt~~-n~~~~Sev~~FEYr~~~l~~~~~~~~~~~~~~e~~Lq~Rl~~lL~s~~~~~~ils~~~~~~~~~e~~~--~ 508 (640)
|+|||+|+ ++.+|||+|+|+|...+....+... -.....++.++.|+..|+..+ .+++.++..+.+..+... +
T Consensus 468 V~l~V~c~~~~~~~se~ref~~~~~~~~~~d~~s-~~d~~~~~sl~~rl~~~~~r~---~~~~~s~~~~~n~~~~~~~~l 543 (975)
T KOG0520|consen 468 VNLQVTCRISGLACSEVREFAYLVQPSQQIDKLS-WEDFLFQMSLLHRLETMLNRK---QSILSSKPSTENTSDAESGNL 543 (975)
T ss_pred EEEEEEecccceeeeeehheeecccCcccccccc-cccchhhhHHHHHHHHHHHHh---HhHhhccCCccccccccchhH
Confidence 99999999 9999999999999984311111000 011233455666666665433 235566777777777776 8
Q ss_pred hcccccccccHHH-HHHHhccCCCCccccccHHHHHHHhCcHHHHHHHHHhcC-CCccc-CCCCCCCHHHHHHHhCCHHH
Q 006569 509 ASKSTCISNSWAY-LFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVEG-SKTTE-YDVHGQGVIHLCAMLGYTWA 585 (640)
Q Consensus 509 ~~k~~a~~~~w~~-ll~~l~~~~~~~~~~~~~L~~a~l~~~L~~~Ll~kl~~g-~~~~~-~D~~G~TpLHlAA~lG~~~i 585 (640)
..|+.++.+.|.+ .+....++.....+.+..+++.++++.++.||++++.+. +.+.. .|.+|++.+|++|.+|+.|+
T Consensus 544 ~skv~~l~~~~~~r~~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA 623 (975)
T KOG0520|consen 544 ASKVVHLLNEWAYRLLKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWA 623 (975)
T ss_pred HHHHHHHHHHHHHHHHhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCcee
Confidence 8899999999999 899988888889999999999999999999999999885 44444 99999999999999999999
Q ss_pred HHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhh
Q 006569 586 ILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQ 629 (640)
Q Consensus 586 v~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~ 629 (640)
+.+++++|..++++|.+||||||||+.+||+.++..|+.-|++.
T Consensus 624 ~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~ 667 (975)
T KOG0520|consen 624 FLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADP 667 (975)
T ss_pred EEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999988864
No 2
>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin-binding domain and ankyrins [].; GO: 0005516 calmodulin binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=100.00 E-value=4.4e-63 Score=443.04 Aligned_cols=117 Identities=62% Similarity=1.077 Sum_probs=114.4
Q ss_pred HHHHHHhcCChhHHHHHHhCCCcceeccCCCCCCCCccEEEeehhhhhhccccCccceecCCCCchhhhhhhcccCCEee
Q 006569 25 MEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEER 104 (640)
Q Consensus 25 ~~~~~~rwl~~~ei~~il~~~~~~~~~~~~~~~p~~g~~~l~~r~~~~~fr~dg~~w~kkk~g~~~~e~h~~lkv~~~~~ 104 (640)
++| ++|||+|+||++||+||++|++..+||+||+|||+|||||+++||||||||+|||||||||||||||||||||+|+
T Consensus 2 ~~~-~~rWl~~~Ei~~IL~n~~~~~~~~~~~~rP~sGslfLf~Rk~~r~fRkDG~~WrKkkdgktvRE~HekLKv~~~e~ 80 (118)
T PF03859_consen 2 LKE-KTRWLKPEEIAFILLNYEKFQIWLEPPNRPPSGSLFLFNRKVVRFFRKDGHNWRKKKDGKTVREDHEKLKVGGVEV 80 (118)
T ss_pred chH-hcccCCHHHHHHHHHhHHhCCcccCCCCCCCCceEEEEEchHhhhhhcccceeEEcCCCCchhhhhhhhccCceee
Confidence 445 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeecCCCCccceeeeecccCCCCceEEEeccccC
Q 006569 105 IHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETH 142 (640)
Q Consensus 105 ~~~~y~~~~~~~~f~rr~y~~~~~~~~~ivlvhy~~~~ 142 (640)
||||||||+++||||||||||||++|+||||||||||+
T Consensus 81 l~~~Yah~~~~~~F~RR~Ywll~~~~~~iVLVHY~~v~ 118 (118)
T PF03859_consen 81 LNCYYAHSEDNPTFHRRCYWLLDPPYEHIVLVHYLDVK 118 (118)
T ss_pred eEEEEEeeccCCCeeeEEEEccCCCCceEEEEEeeecC
Confidence 99999999999999999999999999999999999985
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=4.4e-16 Score=150.03 Aligned_cols=120 Identities=23% Similarity=0.234 Sum_probs=98.7
Q ss_pred hcccccccccHHHHHHHhccC-----CCCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhC
Q 006569 509 ASKSTCISNSWAYLFKSVGDK-----RTSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLG 581 (640)
Q Consensus 509 ~~k~~a~~~~w~~ll~~l~~~-----~~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG 581 (640)
.+...++..+-.++++.|... +.....++++|+.|+-|+++. ++|++ .|+.+..+|+.|+||||.||..|
T Consensus 74 tPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle---~ga~i~~kD~~~qtplHRAAavG 150 (226)
T KOG4412|consen 74 TPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLE---KGALIRIKDKQGQTPLHRAAAVG 150 (226)
T ss_pred chhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHh---cCCCCcccccccCchhHHHHhcc
Confidence 333444444555666666444 334566999999999999987 66643 45555559999999999999999
Q ss_pred CHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 582 YTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 582 ~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
...+|++|+..|+.+|.+|+.||||||.|..-||.+++.+|+.+|||..+
T Consensus 151 klkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~ 200 (226)
T KOG4412|consen 151 KLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDR 200 (226)
T ss_pred chhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHHhccceee
Confidence 99999999999999999999999999999999999999999999998654
No 4
>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors. COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.
Probab=99.53 E-value=3.2e-14 Score=120.48 Aligned_cols=82 Identities=22% Similarity=0.332 Sum_probs=72.4
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCC-CCCceeEEEEEeCCCCC
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPP-HSPGLFLLYMSLDGHKP 443 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pp-h~pG~Vpl~Vt~~n~~~ 443 (640)
+.|+.++|+||++.|||+|+|+|..|.+ .+.||||+..|=.|+|++.+|+|.+|| |.||.|.+.++.....-
T Consensus 1 P~I~ai~P~eG~~tGGt~VtI~GenF~~-------gl~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~~~~~~ 73 (85)
T cd01175 1 PCIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQF 73 (85)
T ss_pred CcccEecCCCCcccCCeEEEEECCCCCC-------CcEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEECceee
Confidence 3699999999999999999999987765 599999999999999999999999999 99999999999888776
Q ss_pred ccc-ceeeeec
Q 006569 444 ISQ-VLNFEYR 453 (640)
Q Consensus 444 ~Se-v~~FEYr 453 (640)
|.. +..|-|.
T Consensus 74 ~~~~p~~f~y~ 84 (85)
T cd01175 74 CKGTPGRFVYT 84 (85)
T ss_pred ccCCCceEEec
Confidence 643 4566664
No 5
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.47 E-value=8.5e-14 Score=134.39 Aligned_cols=120 Identities=21% Similarity=0.130 Sum_probs=99.3
Q ss_pred cccccHHHHHHHhcc-CCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHH
Q 006569 514 CISNSWAYLFKSVGD-KRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAI 586 (640)
Q Consensus 514 a~~~~w~~ll~~l~~-~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv 586 (640)
+..-++.+++..|+. .++. .+.+++||+.++..+... +-|+.| .+.+.+..++.|+|+||+||..|..+++
T Consensus 45 a~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r--~~advna~tn~G~T~LHyAagK~r~eIa 122 (226)
T KOG4412|consen 45 ACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNR--SGADVNATTNGGQTCLHYAAGKGRLEIA 122 (226)
T ss_pred eeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcC--CCCCcceecCCCcceehhhhcCChhhHH
Confidence 456788888888762 2222 355899999999887654 566543 2556666889999999999999999999
Q ss_pred HHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhch-----hhhhhhcc
Q 006569 587 LLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQIS-----MQLVRLSL 635 (640)
Q Consensus 587 ~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~Ga-----D~l~r~gl 635 (640)
.+|+.+|+.|+.+|..|.||||-||.-|..+++++||..|| |-.+.+||
T Consensus 123 qlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL 176 (226)
T KOG4412|consen 123 QLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPL 176 (226)
T ss_pred HHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHH
Confidence 99999999999999999999999999999999999999996 55666666
No 6
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.45 E-value=4.2e-13 Score=115.06 Aligned_cols=86 Identities=27% Similarity=0.349 Sum_probs=71.3
Q ss_pred HHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHH
Q 006569 540 FFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYE 617 (640)
Q Consensus 540 L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~e 617 (640)
|+.|+..+++. ++|++ .+.+. +. |.||||+||..|+.+++++|+.+|++++.+|..|+||||+|+..|+.+
T Consensus 1 L~~A~~~~~~~~~~~ll~---~~~~~---~~-~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 73 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLE---KGADI---NL-GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLE 73 (89)
T ss_dssp HHHHHHTTTHHHHHHHHH---TTSTT---TS-SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHH
T ss_pred CHHHHHcCCHHHHHHHHH---CcCCC---CC-CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHH
Confidence 56677777766 66653 22222 22 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhchhhhhh
Q 006569 618 SSSYHIYQISMQLVR 632 (640)
Q Consensus 618 iV~lLLs~GaD~l~r 632 (640)
++++|+++|+|...|
T Consensus 74 ~~~~Ll~~g~~~~~~ 88 (89)
T PF12796_consen 74 IVKLLLEHGADVNIR 88 (89)
T ss_dssp HHHHHHHTTT-TTSS
T ss_pred HHHHHHHcCCCCCCc
Confidence 999999999997654
No 7
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.41 E-value=3.7e-13 Score=149.75 Aligned_cols=104 Identities=25% Similarity=0.338 Sum_probs=75.5
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCC-CCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 610 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D-~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~A 610 (640)
.++.+.|+.|+++|++. ++|++ .|++++..+ .-+.||||+||++|+..+|.+|+++|||++.+|..|.||||.|
T Consensus 76 ~~g~tlLHWAAiNNrl~v~r~li~---~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla 152 (600)
T KOG0509|consen 76 REGVTLLHWAAINNRLDVARYLIS---HGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLA 152 (600)
T ss_pred cCCccceeHHHHcCcHHHHHHHHH---cCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHH
Confidence 45677777777777765 67743 566666643 6677777777777777777777777777777777777777777
Q ss_pred HHcCCHHHHHHHHHhch-----hhhhhhcc-ccccC
Q 006569 611 AYYGRYESSSYHIYQIS-----MQLVRLSL-YALYK 640 (640)
Q Consensus 611 A~~Gh~eiV~lLLs~Ga-----D~l~r~gl-~~~~~ 640 (640)
|..||.-+|.+||.+|+ |..+|++| +|.||
T Consensus 153 ~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAayk 188 (600)
T KOG0509|consen 153 AQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYK 188 (600)
T ss_pred HHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHh
Confidence 77777777777777776 35666777 66665
No 8
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.34 E-value=2.1e-12 Score=101.75 Aligned_cols=54 Identities=26% Similarity=0.373 Sum_probs=46.9
Q ss_pred CCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHH
Q 006569 570 GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHI 623 (640)
Q Consensus 570 G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLL 623 (640)
|+||||+||..|+.+++++|+++|+++|.+|..|+||||+|+.+|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 789999999999999999999999999999999999999999999999999997
No 9
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.33 E-value=1.6e-12 Score=124.85 Aligned_cols=95 Identities=19% Similarity=0.187 Sum_probs=80.7
Q ss_pred cccHHHHHHHhCcHH--HHHHHHHhcCCC-cccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHH
Q 006569 536 AKDSFFELTLKSKLK--EWLLERVVEGSK-TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~--~~Ll~kl~~g~~-~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~ 612 (640)
...-++.++.++++. +-|+ .+.++ ++.+|++|.||||.||..|+.++|+.|+..|++++++...||||||-||.
T Consensus 63 p~rl~lwaae~nrl~eV~~lL---~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAck 139 (228)
T KOG0512|consen 63 PIRLLLWAAEKNRLTEVQRLL---SEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACK 139 (228)
T ss_pred HHHHHHHHHhhccHHHHHHHH---HhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhc
Confidence 345567888888876 3332 23444 44499999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhchhhhhhh
Q 006569 613 YGRYESSSYHIYQISMQLVRL 633 (640)
Q Consensus 613 ~Gh~eiV~lLLs~GaD~l~r~ 633 (640)
.++.+++.+||++|||+...+
T Consensus 140 WnN~~va~~LLqhgaDVnA~t 160 (228)
T KOG0512|consen 140 WNNFEVAGRLLQHGADVNAQT 160 (228)
T ss_pred ccchhHHHHHHhccCcccccc
Confidence 999999999999999976543
No 10
>PHA02791 ankyrin-like protein; Provisional
Probab=99.31 E-value=6.1e-12 Score=132.08 Aligned_cols=111 Identities=21% Similarity=0.272 Sum_probs=67.7
Q ss_pred cccccHHHHHHHhccCCCC--ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHH
Q 006569 514 CISNSWAYLFKSVGDKRTS--LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLF 589 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~--~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lL 589 (640)
|+..+..++++.+...+.. ..++.++|+.|+..++.. ++|+ ..|++.+.+|..|.||||+||..|+.+++++|
T Consensus 37 Aa~~g~~eiv~~Ll~~ga~~n~~d~~TpLh~Aa~~g~~eiV~lLL---~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~L 113 (284)
T PHA02791 37 AIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILL---FSGMDDSQFDDKGNTALYYAVDSGNMQTVKLF 113 (284)
T ss_pred HHHcCCHHHHHHHHHCcCCCcCCCCCCHHHHHHHCCCHHHHHHHH---HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3345555555555433221 123466777776666544 4443 24444445666777777777777777777777
Q ss_pred HHCCCCcccccCCCC-cHHHHHHHcCCHHHHHHHHHhch
Q 006569 590 SWSGLSLDFRDKYGW-TALHWAAYYGRYESSSYHIYQIS 627 (640)
Q Consensus 590 L~~Gadin~rD~~G~-TpLH~AA~~Gh~eiV~lLLs~Ga 627 (640)
+.+|+++|.++..|| ||||+||..|+.++|++||++|+
T Consensus 114 l~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~ 152 (284)
T PHA02791 114 VKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP 152 (284)
T ss_pred HHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCC
Confidence 777777777666665 66777777777777777766654
No 11
>PHA02791 ankyrin-like protein; Provisional
Probab=99.29 E-value=1.2e-11 Score=129.99 Aligned_cols=117 Identities=15% Similarity=0.043 Sum_probs=93.0
Q ss_pred ccccccccHHHHHHHhccCCCCc----ccc-ccHHHHHHHhCcHH--HHHHHHHhcCCCcccCC-CCCCCHHHHHHHhCC
Q 006569 511 KSTCISNSWAYLFKSVGDKRTSL----PEA-KDSFFELTLKSKLK--EWLLERVVEGSKTTEYD-VHGQGVIHLCAMLGY 582 (640)
Q Consensus 511 k~~a~~~~w~~ll~~l~~~~~~~----~~~-~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D-~~G~TpLHlAA~lG~ 582 (640)
...|+..++.++++.|...+... ..+ .++|+.|+..++.. ++|++ .+... .| ..|.||||+||..|+
T Consensus 98 Lh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~---~~~~~--~d~~~g~TpLh~Aa~~g~ 172 (284)
T PHA02791 98 LYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLS---EIPST--FDLAILLSCIHITIKNGH 172 (284)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHh---cCCcc--cccccCccHHHHHHHcCC
Confidence 34455677888888886654432 123 47999999988765 67754 23222 23 358999999999999
Q ss_pred HHHHHHHHHCCCCcccccCCCCcH-HHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 583 TWAILLFSWSGLSLDFRDKYGWTA-LHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 583 ~~iv~lLL~~Gadin~rD~~G~Tp-LH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
.+++++|+.+|+++|.+|..|+|| ||+||..|+.++|++||++|||....
T Consensus 173 ~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~ 223 (284)
T PHA02791 173 VDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSV 223 (284)
T ss_pred HHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccC
Confidence 999999999999999999999987 99999999999999999999987543
No 12
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.27 E-value=2.2e-11 Score=117.63 Aligned_cols=98 Identities=14% Similarity=0.014 Sum_probs=83.7
Q ss_pred cccccHHHHHHHhCcH-----HHHHHHHHhcCCCcccCC-CCCCCHHHHHHHhCCHHHHHHHHH-CCCCcccccCCCCcH
Q 006569 534 PEAKDSFFELTLKSKL-----KEWLLERVVEGSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTA 606 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L-----~~~Ll~kl~~g~~~~~~D-~~G~TpLHlAA~lG~~~iv~lLL~-~Gadin~rD~~G~Tp 606 (640)
..++++|+.|+..+.. .++|+ ..|+.++.+| ..|.||||+|+..|+.+++++|+. .|++++.+|..|+||
T Consensus 55 ~~g~t~Lh~Aa~~g~~~~~~~i~~Ll---~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tp 131 (166)
T PHA02743 55 HHGRQCTHMVAWYDRANAVMKIELLV---NMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETA 131 (166)
T ss_pred CCCCcHHHHHHHhCccCHHHHHHHHH---HcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCH
Confidence 4588999999987652 35774 3566666677 589999999999999999999995 899999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhchhhhhhhc
Q 006569 607 LHWAAYYGRYESSSYHIYQISMQLVRLS 634 (640)
Q Consensus 607 LH~AA~~Gh~eiV~lLLs~GaD~l~r~g 634 (640)
||+|+..|+.+++++|+.+||+..-..+
T Consensus 132 L~~A~~~~~~~iv~~Ll~~ga~~~~~~~ 159 (166)
T PHA02743 132 YHIAYKMRDRRMMEILRANGAVCDDPLS 159 (166)
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCccc
Confidence 9999999999999999999998654443
No 13
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.26 E-value=2.3e-11 Score=132.69 Aligned_cols=112 Identities=14% Similarity=0.057 Sum_probs=62.1
Q ss_pred cccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHH
Q 006569 516 SNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLF 589 (640)
Q Consensus 516 ~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lL 589 (640)
..+..++++.|.+.+.. ...+.++|+.|+..++.. ++|+ ..|...+..|..|.||||+|+..|+.+++++|
T Consensus 111 ~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll---~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~L 187 (413)
T PHA02875 111 ILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLI---DHKACLDIEDCCGCTPLIIAMAKGDIAICKML 187 (413)
T ss_pred HhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH---hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34445555555433222 223556666666555544 4443 23343444566666666666666666666666
Q ss_pred HHCCCCcccccCCCC-cHHHHHHHcCCHHHHHHHHHhchhhh
Q 006569 590 SWSGLSLDFRDKYGW-TALHWAAYYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 590 L~~Gadin~rD~~G~-TpLH~AA~~Gh~eiV~lLLs~GaD~l 630 (640)
+.+|+++|..+..|. ||||+|+..|+.++|++|+.+|||..
T Consensus 188 l~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n 229 (413)
T PHA02875 188 LDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCN 229 (413)
T ss_pred HhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcc
Confidence 666666666665553 56666666666666666666666643
No 14
>PHA02741 hypothetical protein; Provisional
Probab=99.25 E-value=2.3e-11 Score=117.59 Aligned_cols=112 Identities=10% Similarity=0.031 Sum_probs=80.3
Q ss_pred cccccHHHHHHHhcc----------CCCCccccccHHHHHHHhCcH------HHHHHHHHhcCCCcccCCC-CCCCHHHH
Q 006569 514 CISNSWAYLFKSVGD----------KRTSLPEAKDSFFELTLKSKL------KEWLLERVVEGSKTTEYDV-HGQGVIHL 576 (640)
Q Consensus 514 a~~~~w~~ll~~l~~----------~~~~~~~~~~~L~~a~l~~~L------~~~Ll~kl~~g~~~~~~D~-~G~TpLHl 576 (640)
++..++.++++.+.. .+.....+.++|+.|+..++. .++|+ ..|++.+.++. .|.||||+
T Consensus 28 Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll---~~gadin~~~~~~g~TpLh~ 104 (169)
T PHA02741 28 AARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLI---ELGADINAQEMLEGDTALHL 104 (169)
T ss_pred HHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHH---HcCCCCCCCCcCCCCCHHHH
Confidence 445667777665421 112233577888888877652 24553 34555555664 78888888
Q ss_pred HHHhCCHHHHHHHHH-CCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchh
Q 006569 577 CAMLGYTWAILLFSW-SGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISM 628 (640)
Q Consensus 577 AA~lG~~~iv~lLL~-~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD 628 (640)
|+..|+.+++++|+. .|++++.+|..|+||||+|+..|+.+++++|+..++-
T Consensus 105 A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 105 AAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred HHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence 888888888888886 5888888888888888888888888888888887654
No 15
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.23 E-value=1.6e-11 Score=107.18 Aligned_cols=76 Identities=21% Similarity=0.227 Sum_probs=68.4
Q ss_pred cCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhhhcc
Q 006569 559 EGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVRLSL 635 (640)
Q Consensus 559 ~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r~gl 635 (640)
+|-+++. -..|++|||+||-.|...++++|+..|++|+.+|++|-|||--|...||.++|++||++|||...+.|=
T Consensus 24 ~g~nVn~-~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~Pd 99 (117)
T KOG4214|consen 24 EGLNVNE-IYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPD 99 (117)
T ss_pred ccccHHH-HhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCC
Confidence 4434433 347999999999999999999999999999999999999999999999999999999999999988763
No 16
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.23 E-value=1.3e-11 Score=133.23 Aligned_cols=111 Identities=15% Similarity=0.150 Sum_probs=94.1
Q ss_pred cccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q 006569 514 CISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAIL 587 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~ 587 (640)
|...||.++++.|...+.. +..-.+||..|+..+++. +||++ .|++..-.|+.|.|.||+||..|+.++++
T Consensus 91 AsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE---~gad~~IanrhGhTcLmIa~ykGh~~I~q 167 (615)
T KOG0508|consen 91 ASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVE---HGADPEIANRHGHTCLMIACYKGHVDIAQ 167 (615)
T ss_pred HhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHH---cCCCCcccccCCCeeEEeeeccCchHHHH
Confidence 3457899999988554432 222348999999999977 78864 34444449999999999999999999999
Q ss_pred HHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhch
Q 006569 588 LFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQIS 627 (640)
Q Consensus 588 lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~Ga 627 (640)
+|++.|+|+|.++..|.||||.||..||.+++++||.+|+
T Consensus 168 yLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga 207 (615)
T KOG0508|consen 168 YLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGA 207 (615)
T ss_pred HHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999999886
No 17
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.22 E-value=5.1e-11 Score=129.92 Aligned_cols=117 Identities=17% Similarity=0.110 Sum_probs=95.2
Q ss_pred cccccccHHHHHHHhccCCCC-----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHH
Q 006569 512 STCISNSWAYLFKSVGDKRTS-----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTW 584 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~~~-----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~ 584 (640)
..|+..+..++++.+.+.+.. ...+.++|+.|+..++.. ++|+ ..|++.+..+..|.||||+|+..|..+
T Consensus 73 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll---~~gad~~~~~~~g~tpLh~A~~~~~~~ 149 (413)
T PHA02875 73 HDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLI---ARGADPDIPNTDKFSPLHLAVMMGDIK 149 (413)
T ss_pred HHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHH---hCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 344456677777777654332 234789999999888765 6664 356655558889999999999999999
Q ss_pred HHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 585 AILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 585 iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
++++|+.+|++++.+|..|+||||+|+..|+.+++++||.+|+|...
T Consensus 150 ~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~ 196 (413)
T PHA02875 150 GIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDY 196 (413)
T ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999999999999999999999998654
No 18
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.22 E-value=1.9e-11 Score=115.84 Aligned_cols=92 Identities=11% Similarity=0.002 Sum_probs=78.7
Q ss_pred ccccHHHHHHHhCcHH-----HHHHHHHhcCCCcccCC-CCCCCHHHHHHHhCCHHHHHHHHH-CCCCcccccCCCCcHH
Q 006569 535 EAKDSFFELTLKSKLK-----EWLLERVVEGSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTAL 607 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~-----~~Ll~kl~~g~~~~~~D-~~G~TpLHlAA~lG~~~iv~lLL~-~Gadin~rD~~G~TpL 607 (640)
.+.++|+.++..+++. ++| +..|++.+.++ ..|.||||+|+..|+.+++++|+. .|++++.+|..|+|||
T Consensus 54 ~g~t~Lh~a~~~~~~~~~e~v~~L---l~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL 130 (154)
T PHA02736 54 HGKQCVHIVSNPDKADPQEKLKLL---MEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPY 130 (154)
T ss_pred CCCEEEEeecccCchhHHHHHHHH---HHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHH
Confidence 4678888888776642 445 34566666677 589999999999999999999997 5999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhchhh
Q 006569 608 HWAAYYGRYESSSYHIYQISMQ 629 (640)
Q Consensus 608 H~AA~~Gh~eiV~lLLs~GaD~ 629 (640)
|+|+..|+.+++++|+.+||+.
T Consensus 131 ~~A~~~~~~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 131 YVACERHDAKMMNILRAKGAQC 152 (154)
T ss_pred HHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999874
No 19
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.21 E-value=1.4e-11 Score=133.91 Aligned_cols=90 Identities=18% Similarity=0.241 Sum_probs=73.7
Q ss_pred HHHHHHhCcHHHHHHHHHhcCCCccc-CCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHH
Q 006569 540 FFELTLKSKLKEWLLERVVEGSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYES 618 (640)
Q Consensus 540 L~~a~l~~~L~~~Ll~kl~~g~~~~~-~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~ei 618 (640)
|+.++|.+.+. |++++...-.++. .+..|.|+||-|.-.||.+||++|+..|+|||+.|.+||||||+||.+++.-+
T Consensus 554 LLDaaLeGEld--lVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ 631 (752)
T KOG0515|consen 554 LLDAALEGELD--LVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPM 631 (752)
T ss_pred HHhhhhcchHH--HHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHH
Confidence 45666666654 2223322234444 67889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhhhh
Q 006569 619 SSYHIYQISMQLV 631 (640)
Q Consensus 619 V~lLLs~GaD~l~ 631 (640)
++.|+.+||-++.
T Consensus 632 ckqLVe~GaavfA 644 (752)
T KOG0515|consen 632 CKQLVESGAAVFA 644 (752)
T ss_pred HHHHHhccceEEe
Confidence 9999999986543
No 20
>PHA02795 ankyrin-like protein; Provisional
Probab=99.21 E-value=4.6e-11 Score=131.47 Aligned_cols=114 Identities=11% Similarity=0.036 Sum_probs=89.5
Q ss_pred ccccccHHHHHHHhccCCCCccc----------cccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHh
Q 006569 513 TCISNSWAYLFKSVGDKRTSLPE----------AKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAML 580 (640)
Q Consensus 513 ~a~~~~w~~ll~~l~~~~~~~~~----------~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~l 580 (640)
.++..++.++++.+...+....+ +.++++.+...+.+. ++|+ ..|++++.+|..|.||||+||..
T Consensus 155 ~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LI---s~GADIN~kD~~G~TpLh~Aa~~ 231 (437)
T PHA02795 155 RGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCI---PYIEDINQLDAGGRTLLYRAIYA 231 (437)
T ss_pred HHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHH---hCcCCcCcCCCCCCCHHHHHHHc
Confidence 34456788888888666542211 223444444444433 6664 46777777999999999999999
Q ss_pred CCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcC--------CHHHHHHHHHhchhh
Q 006569 581 GYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG--------RYESSSYHIYQISMQ 629 (640)
Q Consensus 581 G~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~G--------h~eiV~lLLs~GaD~ 629 (640)
|+.+++++|+.+|+++|.+|..|+||||+|+..| |.+++++|+++|++.
T Consensus 232 g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI 288 (437)
T PHA02795 232 GYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSI 288 (437)
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999998 579999999999863
No 21
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.19 E-value=8.5e-11 Score=117.75 Aligned_cols=111 Identities=14% Similarity=0.028 Sum_probs=85.7
Q ss_pred cHHHHHHHhccCCCCc-----cccccHHHHHHHhC-----cHHHHHHHHHhcCCCcccCCCCCCCHHHHHHH--hCCHHH
Q 006569 518 SWAYLFKSVGDKRTSL-----PEAKDSFFELTLKS-----KLKEWLLERVVEGSKTTEYDVHGQGVIHLCAM--LGYTWA 585 (640)
Q Consensus 518 ~w~~ll~~l~~~~~~~-----~~~~~~L~~a~l~~-----~L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~--lG~~~i 585 (640)
+..++++.+.+.+... ..+.++|+.++... .+.++|+ ..|++++.+|..|.||||+|+. .++.++
T Consensus 64 ~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll---~~gadin~~d~~G~TpLh~a~~~~~~~~~i 140 (209)
T PHA02859 64 VNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILI---DSGSSITEEDEDGKNLLHMYMCNFNVRINV 140 (209)
T ss_pred CCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHH---HCCCCCCCcCCCCCCHHHHHHHhccCCHHH
Confidence 4678888876654432 24678999876543 2335564 3566676799999999999876 468899
Q ss_pred HHHHHHCCCCcccccCCCCcHHHH-HHHcCCHHHHHHHHHhchhhhh
Q 006569 586 ILLFSWSGLSLDFRDKYGWTALHW-AAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 586 v~lLL~~Gadin~rD~~G~TpLH~-AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+++|+.+|++++.+|..|.||||. |+..++.++|++|+.+|+|...
T Consensus 141 v~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~ 187 (209)
T PHA02859 141 IKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINE 187 (209)
T ss_pred HHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCC
Confidence 999999999999999999999994 6678899999999999986543
No 22
>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....
Probab=99.19 E-value=5.7e-11 Score=100.63 Aligned_cols=84 Identities=23% Similarity=0.278 Sum_probs=75.2
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCccccee-eeeCCceeecCCCCCCceeEEEEEeCCCCC
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAE-FVQAGVYRCFLPPHSPGLFLLYMSLDGHKP 443 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpae-iiq~GVLrC~~Pph~pG~Vpl~Vt~~n~~~ 443 (640)
+.|++|+|.|++..||++|+|.|.+|.. ....+.|+||+.+.++. .+.+..++|.+|++.+|.+++.|..++...
T Consensus 1 P~I~si~P~~~~~~gg~~ItI~G~~f~~----~~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~~~~ 76 (85)
T PF01833_consen 1 PVITSISPNSGSISGGTNITITGSNFGS----NSSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNGQQI 76 (85)
T ss_dssp SEEEEEESSEEETTCTSEEEEEEESSES----SSTTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETTSEE
T ss_pred CEEEEEECCeEecCCCEEEEEEEEeecc----cCCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECCcCe
Confidence 4799999999999999999999999922 24589999999999988 999999999999999999999999999778
Q ss_pred cccceeeee
Q 006569 444 ISQVLNFEY 452 (640)
Q Consensus 444 ~Sev~~FEY 452 (640)
+++...|+|
T Consensus 77 ~~~~~~F~Y 85 (85)
T PF01833_consen 77 YSNNTSFTY 85 (85)
T ss_dssp EEEEEEEEE
T ss_pred EECCeeeEC
Confidence 899999998
No 23
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.18 E-value=9.1e-11 Score=130.86 Aligned_cols=109 Identities=18% Similarity=0.105 Sum_probs=81.2
Q ss_pred HHHHHhccCCCC----ccc-cccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCC
Q 006569 521 YLFKSVGDKRTS----LPE-AKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG 593 (640)
Q Consensus 521 ~ll~~l~~~~~~----~~~-~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~G 593 (640)
++++.+.+.+.. ... +.++|+.|+..+++. ++|+ ..|++.+..|..|.||||+|+..|+.+++++|+..|
T Consensus 148 ~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll---~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g 224 (477)
T PHA02878 148 EITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLL---SYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENG 224 (477)
T ss_pred HHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHH---HCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 355555444332 233 778888888877655 5664 345555558888888888888888888888888888
Q ss_pred CCcccccCCCCcHHHHHHHc-CCHHHHHHHHHhchhhhhh
Q 006569 594 LSLDFRDKYGWTALHWAAYY-GRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 594 adin~rD~~G~TpLH~AA~~-Gh~eiV~lLLs~GaD~l~r 632 (640)
+++|.+|..|+||||+|+.. ++.++|++||.+|+|+..+
T Consensus 225 a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~ 264 (477)
T PHA02878 225 ASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAK 264 (477)
T ss_pred CCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCcc
Confidence 88888888888888888875 6888888888888876443
No 24
>PHA02741 hypothetical protein; Provisional
Probab=99.18 E-value=1.6e-10 Score=111.67 Aligned_cols=98 Identities=19% Similarity=0.082 Sum_probs=81.0
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHH---hcCCCcccCCCCCCCHHHHHHHhCC----HHHHHHHHHCCCCcccccC-CC
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERV---VEGSKTTEYDVHGQGVIHLCAMLGY----TWAILLFSWSGLSLDFRDK-YG 603 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl---~~g~~~~~~D~~G~TpLHlAA~lG~----~~iv~lLL~~Gadin~rD~-~G 603 (640)
..+.++|+.++..+.+. +.|+..+ ..++..+.+|..|+||||+||..|+ .+++++|+..|+++|.+|. .|
T Consensus 19 ~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g 98 (169)
T PHA02741 19 SEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEG 98 (169)
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCC
Confidence 45889999999988866 5554322 1234455589999999999999998 5889999999999999995 99
Q ss_pred CcHHHHHHHcCCHHHHHHHHHh-chhhhh
Q 006569 604 WTALHWAAYYGRYESSSYHIYQ-ISMQLV 631 (640)
Q Consensus 604 ~TpLH~AA~~Gh~eiV~lLLs~-GaD~l~ 631 (640)
+||||+|+..++.+++++||.+ |+|...
T Consensus 99 ~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~ 127 (169)
T PHA02741 99 DTALHLAAHRRDHDLAEWLCCQPGIDLHF 127 (169)
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCc
Confidence 9999999999999999999984 877543
No 25
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.18 E-value=7.2e-11 Score=114.05 Aligned_cols=97 Identities=23% Similarity=0.255 Sum_probs=77.0
Q ss_pred ccccHHHHHHHhCcHHH--HHHHHH-hcCCCcccCCCCCCCHHHHHHHhCCHHH---HHHHHHCCCCccccc-CCCCcHH
Q 006569 535 EAKDSFFELTLKSKLKE--WLLERV-VEGSKTTEYDVHGQGVIHLCAMLGYTWA---ILLFSWSGLSLDFRD-KYGWTAL 607 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~~--~Ll~kl-~~g~~~~~~D~~G~TpLHlAA~lG~~~i---v~lLL~~Gadin~rD-~~G~TpL 607 (640)
+..+.++.++..+.+.. .++..+ ..+...+.+|..|+||||+||..|..++ +++|+..|+++|.+| ..|+|||
T Consensus 19 ~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpL 98 (166)
T PHA02743 19 DEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLL 98 (166)
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHH
Confidence 45678888888887642 122112 3444455589999999999999998654 789999999999999 5899999
Q ss_pred HHHHHcCCHHHHHHHHH-hchhhhh
Q 006569 608 HWAAYYGRYESSSYHIY-QISMQLV 631 (640)
Q Consensus 608 H~AA~~Gh~eiV~lLLs-~GaD~l~ 631 (640)
|+|+..|+.+++++|+. .|+|...
T Consensus 99 h~A~~~g~~~iv~~Ll~~~gad~~~ 123 (166)
T PHA02743 99 HIAASTKNYELAEWLCRQLGVNLGA 123 (166)
T ss_pred HHHHHhCCHHHHHHHHhccCCCccC
Confidence 99999999999999996 7987654
No 26
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.17 E-value=1.3e-10 Score=128.70 Aligned_cols=117 Identities=17% Similarity=0.109 Sum_probs=96.1
Q ss_pred ccccccccHHHHHHHhccCCCCcc----cc------ccHHHHHHHhCc--H--HHHHHHHHhcCCCcccCCCCCCCHHHH
Q 006569 511 KSTCISNSWAYLFKSVGDKRTSLP----EA------KDSFFELTLKSK--L--KEWLLERVVEGSKTTEYDVHGQGVIHL 576 (640)
Q Consensus 511 k~~a~~~~w~~ll~~l~~~~~~~~----~~------~~~L~~a~l~~~--L--~~~Ll~kl~~g~~~~~~D~~G~TpLHl 576 (640)
...|+..+..++++.+.+.+.... .+ .++|+.++..+. + .++|+ ..|++.+.+|..|.||||+
T Consensus 180 L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll---~~g~din~~d~~g~TpL~~ 256 (480)
T PHA03100 180 LHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLL---SYGVPINIKDVYGFTPLHY 256 (480)
T ss_pred HHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHH---HcCCCCCCCCCCCCCHHHH
Confidence 334455667788888766554332 23 788888888877 3 36775 3566666799999999999
Q ss_pred HHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhh
Q 006569 577 CAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 577 AA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l 630 (640)
|+..|+.+++++|+.+|+++|.+|..|.||||+|+..++.+++++|+.+|++.-
T Consensus 257 A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~ 310 (480)
T PHA03100 257 AVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIK 310 (480)
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHH
Confidence 999999999999999999999999999999999999999999999999999754
No 27
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.16 E-value=1.7e-10 Score=115.62 Aligned_cols=94 Identities=17% Similarity=0.084 Sum_probs=76.8
Q ss_pred cccccHHHHHHH--hC--cHHHHHHHHHhcCCCcccCC-CCCCCHHHHHHHh---CCHHHHHHHHHCCCCcccccCCCCc
Q 006569 534 PEAKDSFFELTL--KS--KLKEWLLERVVEGSKTTEYD-VHGQGVIHLCAML---GYTWAILLFSWSGLSLDFRDKYGWT 605 (640)
Q Consensus 534 ~~~~~~L~~a~l--~~--~L~~~Ll~kl~~g~~~~~~D-~~G~TpLHlAA~l---G~~~iv~lLL~~Gadin~rD~~G~T 605 (640)
..+.++|+.++. .. .+.++|++ .|++.+.++ ..|.||||+|+.. ++.+++++|+.+|+++|.+|..|+|
T Consensus 49 ~~g~TpLh~a~~~~~~~~eiv~~Ll~---~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~T 125 (209)
T PHA02859 49 DLYETPIFSCLEKDKVNVEILKFLIE---NGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKN 125 (209)
T ss_pred ccCCCHHHHHHHcCCCCHHHHHHHHH---CCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCC
Confidence 457889988875 33 45577753 566676675 5899999998864 4789999999999999999999999
Q ss_pred HHHHHHH--cCCHHHHHHHHHhchhhh
Q 006569 606 ALHWAAY--YGRYESSSYHIYQISMQL 630 (640)
Q Consensus 606 pLH~AA~--~Gh~eiV~lLLs~GaD~l 630 (640)
|||+|+. .++.+++++||.+|+|..
T Consensus 126 pLh~a~~~~~~~~~iv~~Li~~gadin 152 (209)
T PHA02859 126 LLHMYMCNFNVRINVIKLLIDSGVSFL 152 (209)
T ss_pred HHHHHHHhccCCHHHHHHHHHcCCCcc
Confidence 9999986 478999999999998853
No 28
>PHA03095 ankyrin-like protein; Provisional
Probab=99.16 E-value=1.6e-10 Score=127.57 Aligned_cols=111 Identities=13% Similarity=0.062 Sum_probs=88.4
Q ss_pred HHHHHHHhccC----CCCccccccHHHHHHHhCcHHHHHHHH-HhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCC
Q 006569 519 WAYLFKSVGDK----RTSLPEAKDSFFELTLKSKLKEWLLER-VVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG 593 (640)
Q Consensus 519 w~~ll~~l~~~----~~~~~~~~~~L~~a~l~~~L~~~Ll~k-l~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~G 593 (640)
...+++.+.+. +.....+.++|+.++..+.....++.. +..|.+.+.+|..|.||||+||..|+.+++++|+.+|
T Consensus 201 ~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~g 280 (471)
T PHA03095 201 RARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALG 280 (471)
T ss_pred cHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 34455554333 233456889999999887643211111 3356666669999999999999999999999999999
Q ss_pred CCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhh
Q 006569 594 LSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQ 629 (640)
Q Consensus 594 adin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~ 629 (640)
+++|.+|.+|+||||+|+..|+.++|++||.++++.
T Consensus 281 ad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~ 316 (471)
T PHA03095 281 ADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSA 316 (471)
T ss_pred CCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCH
Confidence 999999999999999999999999999999999875
No 29
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.15 E-value=1.2e-10 Score=128.31 Aligned_cols=91 Identities=24% Similarity=0.208 Sum_probs=55.0
Q ss_pred cccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHc
Q 006569 536 AKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 613 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~ 613 (640)
+.++|+.|+..+++. ++|+ ..|++.+.+|..|.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|+..
T Consensus 124 g~T~Lh~A~~~~~~~~v~~Ll---~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~ 200 (434)
T PHA02874 124 LKTFLHYAIKKGDLESIKMLF---EYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEY 200 (434)
T ss_pred CccHHHHHHHCCCHHHHHHHH---hCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 455666666555543 4443 23444444566666666666666666666666666666666666666666666666
Q ss_pred CCHHHHHHHHHhchhh
Q 006569 614 GRYESSSYHIYQISMQ 629 (640)
Q Consensus 614 Gh~eiV~lLLs~GaD~ 629 (640)
|+.++|++|+.+|++.
T Consensus 201 g~~~iv~~Ll~~g~~i 216 (434)
T PHA02874 201 GDYACIKLLIDHGNHI 216 (434)
T ss_pred CCHHHHHHHHhCCCCC
Confidence 6666666666666553
No 30
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.15 E-value=1.7e-10 Score=127.12 Aligned_cols=118 Identities=19% Similarity=0.065 Sum_probs=91.0
Q ss_pred ccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHH
Q 006569 513 TCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAI 586 (640)
Q Consensus 513 ~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv 586 (640)
.|+..+..++++.+...+.. ...+.++|+.|+..+.+. ++|+ ..|+..+..|..|.||||+|+..|+.+++
T Consensus 130 ~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll---~~g~~~n~~~~~g~tpL~~A~~~g~~~iv 206 (434)
T PHA02874 130 YAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLL---EKGAYANVKDNNGESPLHNAAEYGDYACI 206 (434)
T ss_pred HHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHH---HCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 34456677778877655432 345789999999888765 6664 34555556889999999999999999999
Q ss_pred HHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhh-----hhhhcc
Q 006569 587 LLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQ-----LVRLSL 635 (640)
Q Consensus 587 ~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~-----l~r~gl 635 (640)
++|+..|++++.++..|+||||+|+..++. ++.+|+ .|++. .++++|
T Consensus 207 ~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~-~i~~Ll-~~~~in~~d~~G~TpL 258 (434)
T PHA02874 207 KLLIDHGNHIMNKCKNGFTPLHNAIIHNRS-AIELLI-NNASINDQDIDGSTPL 258 (434)
T ss_pred HHHHhCCCCCcCCCCCCCCHHHHHHHCChH-HHHHHH-cCCCCCCcCCCCCCHH
Confidence 999999999999999999999999998774 566665 46643 445555
No 31
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.15 E-value=3.7e-11 Score=95.78 Aligned_cols=50 Identities=28% Similarity=0.362 Sum_probs=32.6
Q ss_pred CCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHH
Q 006569 561 SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 610 (640)
Q Consensus 561 ~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~A 610 (640)
...+..|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|
T Consensus 7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp --TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 34445999999999999999999999999999999999999999999998
No 32
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.15 E-value=1e-10 Score=130.53 Aligned_cols=117 Identities=21% Similarity=0.210 Sum_probs=96.7
Q ss_pred cccccHHHHHHHhccCCCCc-----cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHH
Q 006569 514 CISNSWAYLFKSVGDKRTSL-----PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAI 586 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~~-----~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv 586 (640)
|+-++-.++++.+.+.+.+. .-+.+||+.|+.++++. +.| ++.|++.+.+|++|.|+||+||..|+.-+|
T Consensus 85 AAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lL---lqhGAdpt~~D~~G~~~lHla~~~~~~~~v 161 (600)
T KOG0509|consen 85 AAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLL---LQHGADPTLKDKQGLTPLHLAAQFGHTALV 161 (600)
T ss_pred HHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHH---HHcCCCCceecCCCCcHHHHHHHhCchHHH
Confidence 33466677888775554432 23578999999999987 455 446666666999999999999999999999
Q ss_pred HHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhhh
Q 006569 587 LLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVRL 633 (640)
Q Consensus 587 ~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r~ 633 (640)
-+||.+|+++|.+|.+|+|||||||++|+...++.||.-|++...+-
T Consensus 162 ayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d 208 (600)
T KOG0509|consen 162 AYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTD 208 (600)
T ss_pred HHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccc
Confidence 99999999999999999999999999999998999999898766544
No 33
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.15 E-value=5e-11 Score=112.90 Aligned_cols=97 Identities=20% Similarity=0.242 Sum_probs=77.0
Q ss_pred cccccHHHHHHHhCcHHHHHHHHHh-cCCC---cccCCCCCCCHHHHHHHhCCHH---HHHHHHHCCCCccccc-CCCCc
Q 006569 534 PEAKDSFFELTLKSKLKEWLLERVV-EGSK---TTEYDVHGQGVIHLCAMLGYTW---AILLFSWSGLSLDFRD-KYGWT 605 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~~~Ll~kl~-~g~~---~~~~D~~G~TpLHlAA~lG~~~---iv~lLL~~Gadin~rD-~~G~T 605 (640)
..+.++|+.|+..+++.+.+..+-. .... ....|..|+||||+||..|..+ ++++|+..|+++|.+| ..|+|
T Consensus 15 ~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T 94 (154)
T PHA02736 15 IEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNT 94 (154)
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCc
Confidence 3588999999999986654432211 0111 1236889999999999999864 6789999999999998 59999
Q ss_pred HHHHHHHcCCHHHHHHHHHh-chhhh
Q 006569 606 ALHWAAYYGRYESSSYHIYQ-ISMQL 630 (640)
Q Consensus 606 pLH~AA~~Gh~eiV~lLLs~-GaD~l 630 (640)
|||+|+..|+.+++++||.+ |+|..
T Consensus 95 ~Lh~A~~~~~~~i~~~Ll~~~g~d~n 120 (154)
T PHA02736 95 PLHIAVYTQNYELATWLCNQPGVNME 120 (154)
T ss_pred HHHHHHHhCCHHHHHHHHhCCCCCCc
Confidence 99999999999999999985 88753
No 34
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.11 E-value=2.8e-10 Score=135.39 Aligned_cols=117 Identities=17% Similarity=0.037 Sum_probs=87.7
Q ss_pred ccccccHHHHHHHhccC----CCCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHH-------
Q 006569 513 TCISNSWAYLFKSVGDK----RTSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAM------- 579 (640)
Q Consensus 513 ~a~~~~w~~ll~~l~~~----~~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~------- 579 (640)
.++..+..++++.+... +.....++++|+.|+.+++.. ++|+ ..|++.+.+|.+|.||||+||.
T Consensus 531 ~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll---~~gadin~~d~~G~TpL~~A~~~g~~~iv 607 (823)
T PLN03192 531 TVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLL---KHACNVHIRDANGNTALWNAISAKHHKIF 607 (823)
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH---hcCCCCCCcCCCCCCHHHHHHHhCCHHHH
Confidence 34445566666665433 333455888898888888755 4553 3455555588888888875554
Q ss_pred ------------------------hCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 580 ------------------------LGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 580 ------------------------lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
.|+.++++.|+.+|+++|.+|.+|+||||+|+..|+.++|++|+.+|||...+
T Consensus 608 ~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~ 684 (823)
T PLN03192 608 RILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKA 684 (823)
T ss_pred HHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCC
Confidence 45555667788899999999999999999999999999999999999987554
No 35
>PHA02798 ankyrin-like protein; Provisional
Probab=99.10 E-value=2.9e-10 Score=127.44 Aligned_cols=113 Identities=12% Similarity=0.043 Sum_probs=90.9
Q ss_pred ccHHHHHHHhccCCCC----ccccccHHHHHHHh-------CcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhC---C
Q 006569 517 NSWAYLFKSVGDKRTS----LPEAKDSFFELTLK-------SKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLG---Y 582 (640)
Q Consensus 517 ~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~-------~~L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG---~ 582 (640)
....++++.+.+.+.. ...+.++|+.++.. .++.++|+ ..|++++.+|..|.||||+|+..| +
T Consensus 48 ~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll---~~GadiN~~d~~G~TpLh~a~~~~~~~~ 124 (489)
T PHA02798 48 SPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILI---ENGADINKKNSDGETPLYCLLSNGYINN 124 (489)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHH---HCCCCCCCCCCCcCcHHHHHHHcCCcCh
Confidence 3456777777555443 34588999887643 23446664 467777779999999999999886 6
Q ss_pred HHHHHHHHHCCCCcccccCCCCcHHHHHHHcCC---HHHHHHHHHhchhhhhh
Q 006569 583 TWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR---YESSSYHIYQISMQLVR 632 (640)
Q Consensus 583 ~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh---~eiV~lLLs~GaD~l~r 632 (640)
.+++++|+.+|+++|.+|..|+||||+|+..|+ .++|++|+.+|+|...+
T Consensus 125 ~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~ 177 (489)
T PHA02798 125 LEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTH 177 (489)
T ss_pred HHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccc
Confidence 899999999999999999999999999999998 99999999999987544
No 36
>PHA02946 ankyin-like protein; Provisional
Probab=99.08 E-value=5e-10 Score=124.60 Aligned_cols=90 Identities=12% Similarity=-0.016 Sum_probs=48.4
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCC--HHHHHHHHHCCCCccc-ccCCCCcHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGY--TWAILLFSWSGLSLDF-RDKYGWTALHW 609 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~--~~iv~lLL~~Gadin~-rD~~G~TpLH~ 609 (640)
.+.++|+.|+..++.. ++|+ ..|++++.+|+.|+||||+|+..+. .+++++|+.+|+++|. .|..|.||||
T Consensus 71 ~G~TpLh~Aa~~g~~eiv~lLL---~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~- 146 (446)
T PHA02946 71 DGNYPLHIASKINNNRIVAMLL---THGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL- 146 (446)
T ss_pred CCCCHHHHHHHcCCHHHHHHHH---HCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-
Confidence 3555666655555433 4443 2344444455556666665555442 4555556666666653 4555666664
Q ss_pred HHHcCCHHHHHHHHHhchh
Q 006569 610 AAYYGRYESSSYHIYQISM 628 (640)
Q Consensus 610 AA~~Gh~eiV~lLLs~GaD 628 (640)
||..|+.+++++|+++|+|
T Consensus 147 aa~~~~~~vv~~Ll~~gad 165 (446)
T PHA02946 147 ACTDPSERVFKKIMSIGFE 165 (446)
T ss_pred HHHCCChHHHHHHHhcccc
Confidence 4445556666666665554
No 37
>PHA03095 ankyrin-like protein; Provisional
Probab=99.07 E-value=5e-10 Score=123.72 Aligned_cols=109 Identities=15% Similarity=0.065 Sum_probs=71.3
Q ss_pred HHHHHHHhccCCCC----ccccccHHHHHHHhCc-HH--HHHHHHHhcCCCcccCCCCCCCHHHHHH--HhCCHHHHHHH
Q 006569 519 WAYLFKSVGDKRTS----LPEAKDSFFELTLKSK-LK--EWLLERVVEGSKTTEYDVHGQGVIHLCA--MLGYTWAILLF 589 (640)
Q Consensus 519 w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~-L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA--~lG~~~iv~lL 589 (640)
..++++.+.+.+.. ...+.++|+.|+..+. .. ++|+ ..|++.+..|..|.||||+|+ ..++.+++++|
T Consensus 62 ~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl---~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~L 138 (471)
T PHA03095 62 VKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLI---KAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLL 138 (471)
T ss_pred hHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHH---HcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHH
Confidence 56666666544332 2346777777777663 22 4453 345555557777777777777 44566777777
Q ss_pred HHCCCCcccccCCCCcHHHHHHHcC--CHHHHHHHHHhchhhh
Q 006569 590 SWSGLSLDFRDKYGWTALHWAAYYG--RYESSSYHIYQISMQL 630 (640)
Q Consensus 590 L~~Gadin~rD~~G~TpLH~AA~~G--h~eiV~lLLs~GaD~l 630 (640)
+.+|++++.+|..|+||||+|+..+ +.+++++|+.+|++..
T Consensus 139 l~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~ 181 (471)
T PHA03095 139 LRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVY 181 (471)
T ss_pred HHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCc
Confidence 7777777777777777777777654 5677777777777654
No 38
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.07 E-value=4.5e-10 Score=124.50 Aligned_cols=116 Identities=15% Similarity=0.171 Sum_probs=84.1
Q ss_pred cccccHHHHHHHhccCCCC----ccccccHHHHHH--HhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhC--CH
Q 006569 514 CISNSWAYLFKSVGDKRTS----LPEAKDSFFELT--LKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLG--YT 583 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~--l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG--~~ 583 (640)
+...+..++++.+.+.+.. ...+.++|+.|+ ..++.. ++|+ ..|++.+..+..|.||||+|+..| ..
T Consensus 80 a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll---~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 156 (480)
T PHA03100 80 YNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLL---DNGANVNIKNSDGENLLHLYLESNKIDL 156 (480)
T ss_pred HHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHH---HcCCCCCccCCCCCcHHHHHHHcCCChH
Confidence 3445666777766555433 234677888888 555544 5554 345555557788888888888888 88
Q ss_pred HHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 584 WAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 584 ~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+++++|+.+|+++|.+|..|+||||+|+..|+.++|++|+.+|+|...+
T Consensus 157 ~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~ 205 (480)
T PHA03100 157 KILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAG 205 (480)
T ss_pred HHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCC
Confidence 8888888888888888888888888888888888888888888876543
No 39
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.07 E-value=5e-10 Score=125.66 Aligned_cols=112 Identities=11% Similarity=0.050 Sum_probs=85.4
Q ss_pred ccHHHHHHHhccCCCCc---cccccHHHHHHHhCc--------HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHh---CC
Q 006569 517 NSWAYLFKSVGDKRTSL---PEAKDSFFELTLKSK--------LKEWLLERVVEGSKTTEYDVHGQGVIHLCAML---GY 582 (640)
Q Consensus 517 ~~w~~ll~~l~~~~~~~---~~~~~~L~~a~l~~~--------L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~l---G~ 582 (640)
.+..++++.|.+.+... ..+.++|+.++.... +.++|+ ..|++++.+|..|.||||+|+.. |+
T Consensus 47 ~~~~~iv~~Ll~~GAdvn~~~~~~tpL~~a~~~~~~~~~~~~~iv~~Ll---~~Gadin~~d~~g~tpL~~a~~~~~~~~ 123 (494)
T PHA02989 47 DVKIKIVKLLIDNGADVNYKGYIETPLCAVLRNREITSNKIKKIVKLLL---KFGADINLKTFNGVSPIVCFIYNSNINN 123 (494)
T ss_pred CCChHHHHHHHHcCCCccCCCCCCCcHHHHHhccCcchhhHHHHHHHHH---HCCCCCCCCCCCCCcHHHHHHHhcccCc
Confidence 34678888887665542 235688886654322 345563 45777777899999999988765 67
Q ss_pred HHHHHHHHHCCCCc-ccccCCCCcHHHHHHHc--CCHHHHHHHHHhchhhhh
Q 006569 583 TWAILLFSWSGLSL-DFRDKYGWTALHWAAYY--GRYESSSYHIYQISMQLV 631 (640)
Q Consensus 583 ~~iv~lLL~~Gadi-n~rD~~G~TpLH~AA~~--Gh~eiV~lLLs~GaD~l~ 631 (640)
.+++++|+++|+++ +.+|..|+||||+|+.. ++.++|++||++|||...
T Consensus 124 ~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~ 175 (494)
T PHA02989 124 CDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFE 175 (494)
T ss_pred HHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc
Confidence 89999999999999 79999999999998764 689999999999998654
No 40
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.07 E-value=5.3e-10 Score=118.23 Aligned_cols=116 Identities=6% Similarity=-0.007 Sum_probs=64.2
Q ss_pred ccHHHHHHHhccCCCCc--------cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccC-CCCCCCHHHHHHHhCCHHH
Q 006569 517 NSWAYLFKSVGDKRTSL--------PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEY-DVHGQGVIHLCAMLGYTWA 585 (640)
Q Consensus 517 ~~w~~ll~~l~~~~~~~--------~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~-D~~G~TpLHlAA~lG~~~i 585 (640)
.+..++++.|.+.+... ..+.++|+.|+..+.+. ++|+ ..|++++.. +..|.||||+|+..|+.++
T Consensus 43 ~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL---~~GADVN~~~~~~g~TpLh~Aa~~~~~ei 119 (300)
T PHA02884 43 FHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLI---RYGADVNRYAEEAKITPLYISVLHGCLKC 119 (300)
T ss_pred cCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHH---HcCCCcCcccCCCCCCHHHHHHHcCCHHH
Confidence 34455555554433221 13556666666655544 4443 234444433 3456666666666666666
Q ss_pred HHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhhhcc
Q 006569 586 ILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVRLSL 635 (640)
Q Consensus 586 v~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r~gl 635 (640)
+++|+.+|++++.+|..|+||||+|+..++.+++.++...+.+.+...|.
T Consensus 120 vklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (300)
T PHA02884 120 LEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDNEISNFYKHPK 169 (300)
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCCcccccccChh
Confidence 66666666666666666666666666666666655554444444444443
No 41
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.06 E-value=4.8e-10 Score=125.07 Aligned_cols=116 Identities=14% Similarity=0.024 Sum_probs=94.3
Q ss_pred ccccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHh-CCH
Q 006569 511 KSTCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAML-GYT 583 (640)
Q Consensus 511 k~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~l-G~~ 583 (640)
...|+..+..++++.+...+.. ...+.++|+.|+..++.. ++|+ ..|++.+.+|..|.||||+|+.. ++.
T Consensus 172 Lh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll---~~ga~in~~d~~g~TpLh~A~~~~~~~ 248 (477)
T PHA02878 172 LHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILL---ENGASTDARDKCGNTPLHISVGYCKDY 248 (477)
T ss_pred HHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHH---HcCCCCCCCCCCCCCHHHHHHHhcCCH
Confidence 3445567778888887655433 345889999999888755 6664 35666666999999999999976 689
Q ss_pred HHHHHHHHCCCCcccccC-CCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 584 WAILLFSWSGLSLDFRDK-YGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 584 ~iv~lLL~~Gadin~rD~-~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+++++|+.+|+++|.++. .|+||||+| .++.+++++|+.+|||...
T Consensus 249 ~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~ 295 (477)
T PHA02878 249 DILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINS 295 (477)
T ss_pred HHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCC
Confidence 999999999999999986 899999999 5789999999999998554
No 42
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.06 E-value=2e-10 Score=130.70 Aligned_cols=121 Identities=21% Similarity=0.154 Sum_probs=95.2
Q ss_pred cccccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCH
Q 006569 510 SKSTCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYT 583 (640)
Q Consensus 510 ~k~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~ 583 (640)
+...++++|....+..+..-+.+ ..+..++|+-|+.-+++. +-|++ ..+....+..|-.|+||||+|+..||.
T Consensus 276 pLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~-~~~~rllne~D~~g~tpLHlaa~~gH~ 354 (929)
T KOG0510|consen 276 PLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQ-ESDTRLLNESDLHGMTPLHLAAKSGHD 354 (929)
T ss_pred hHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHh-CcCccccccccccCCCchhhhhhcCHH
Confidence 34445567777666666444332 355788999999998866 45543 222233455889999999999999999
Q ss_pred HHHHHHHHCCCCcc---cccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 584 WAILLFSWSGLSLD---FRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 584 ~iv~lLL~~Gadin---~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+++++|+.+|++.+ .+|.+|.||||.||..|+..+|++||++|||.-.
T Consensus 355 ~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~ 405 (929)
T KOG0510|consen 355 RVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGV 405 (929)
T ss_pred HHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceee
Confidence 99999999999987 5799999999999999999999999999999743
No 43
>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=99.03 E-value=1.4e-09 Score=94.15 Aligned_cols=84 Identities=25% Similarity=0.359 Sum_probs=71.2
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCC-CceeEEEEEeCCCCC
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS-PGLFLLYMSLDGHKP 443 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~-pG~Vpl~Vt~~n~~~ 443 (640)
+.|++|+|..|+..|||+|+|.|.+|.. .....|+||+.+.....+.+..+.|.+|++. +|.++|.|.-++..
T Consensus 1 P~I~~i~P~~Gp~~GGT~vtI~G~~~~~-----~~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~~~- 74 (85)
T cd01179 1 PSITSLSPSYGPQSGGTRLTITGKHLNA-----GSSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDGAR- 74 (85)
T ss_pred CeeeEEcCCCCCCCCCEEEEEEEECCCC-----CCeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECCcc-
Confidence 4799999999999999999999999976 2358999999977666678889999999987 78999999988873
Q ss_pred cccceeeeecC
Q 006569 444 ISQVLNFEYRS 454 (640)
Q Consensus 444 ~Sev~~FEYr~ 454 (640)
.+....|+|.+
T Consensus 75 ~~~~~~F~Y~~ 85 (85)
T cd01179 75 RLAPLVFTYTE 85 (85)
T ss_pred cCCCccEEEeC
Confidence 44457899974
No 44
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.03 E-value=8.9e-10 Score=131.61 Aligned_cols=111 Identities=14% Similarity=0.162 Sum_probs=59.9
Q ss_pred ccccHHHHHHHhccCC----CCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHH
Q 006569 515 ISNSWAYLFKSVGDKR----TSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILL 588 (640)
Q Consensus 515 ~~~~w~~ll~~l~~~~----~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~l 588 (640)
+..+|.++...+.+.. .....+-+.++.+...+... +-+ +..|..+..++..|.||||.||..|+..+|++
T Consensus 482 aq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l---~~~ga~v~~~~~r~~TpLh~A~~~g~v~~Vkf 558 (1143)
T KOG4177|consen 482 AQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKIL---LEHGANVDLRTGRGYTPLHVAVHYGNVDLVKF 558 (1143)
T ss_pred hccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHH---hhcCCceehhcccccchHHHHHhcCCchHHHH
Confidence 3456666666554432 12223334444444443332 111 12333344455666666666666666666666
Q ss_pred HHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchh
Q 006569 589 FSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISM 628 (640)
Q Consensus 589 LL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD 628 (640)
|+++|++++.+|+.||||||.||..||.+|+.+|+.+||+
T Consensus 559 LLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~ 598 (1143)
T KOG4177|consen 559 LLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGAS 598 (1143)
T ss_pred hhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCC
Confidence 6666666666666666666666666666666666666654
No 45
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.03 E-value=2.5e-10 Score=123.40 Aligned_cols=122 Identities=14% Similarity=0.134 Sum_probs=102.2
Q ss_pred cccccccccHHHHHHHhccCCC-------------CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHH
Q 006569 510 SKSTCISNSWAYLFKSVGDKRT-------------SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVI 574 (640)
Q Consensus 510 ~k~~a~~~~w~~ll~~l~~~~~-------------~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpL 574 (640)
+.+.++++||.+++..+++... ...++-.+|.-|.--+++. +.|+ ..|+.++.......|||
T Consensus 45 PL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~---~~ga~VN~tT~TNStPL 121 (615)
T KOG0508|consen 45 PLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLL---RRGASVNDTTRTNSTPL 121 (615)
T ss_pred ceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHH---HhcCccccccccCCccH
Confidence 4566778999999988866311 1244667888888788876 6664 35777777777788999
Q ss_pred HHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhhhc
Q 006569 575 HLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVRLS 634 (640)
Q Consensus 575 HlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r~g 634 (640)
--||.-|+.++++.|+++|+|++..|.+|.|-||+||+.||.+|+++|+++|||++.+.-
T Consensus 122 raACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~ 181 (615)
T KOG0508|consen 122 RAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSY 181 (615)
T ss_pred HHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcc
Confidence 999999999999999999999999999999999999999999999999999999887653
No 46
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.02 E-value=1.2e-09 Score=115.57 Aligned_cols=94 Identities=10% Similarity=-0.022 Sum_probs=76.8
Q ss_pred cccHHHHHHHh-Cc--HHHHHHHHHhcCCCcccC----CCCCCCHHHHHHHhCCHHHHHHHHHCCCCccccc-CCCCcHH
Q 006569 536 AKDSFFELTLK-SK--LKEWLLERVVEGSKTTEY----DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTAL 607 (640)
Q Consensus 536 ~~~~L~~a~l~-~~--L~~~Ll~kl~~g~~~~~~----D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD-~~G~TpL 607 (640)
+.++++.++.+ +. +.++|+ ..|++.+.+ ++.|.||||+||..|+.+++++|+.+|+++|.++ ..|+|||
T Consensus 32 ~~~~lL~~A~~~~~~eivk~LL---~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpL 108 (300)
T PHA02884 32 CIANILYSSIKFHYTDIIDAIL---KLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPL 108 (300)
T ss_pred CCCHHHHHHHHcCCHHHHHHHH---HCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHH
Confidence 55656555555 33 336774 456666555 4689999999999999999999999999999964 6899999
Q ss_pred HHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 608 HWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 608 H~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
|+|+..|+.+++++|+.+|||...+
T Consensus 109 h~Aa~~~~~eivklLL~~GAdin~k 133 (300)
T PHA02884 109 YISVLHGCLKCLEILLSYGADINIQ 133 (300)
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 9999999999999999999986543
No 47
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.00 E-value=1.3e-09 Score=127.30 Aligned_cols=90 Identities=16% Similarity=0.073 Sum_probs=49.7
Q ss_pred cHHHHHHHhccCC-CC-----ccccccHHHHHHHhC----cHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhCC--HHH
Q 006569 518 SWAYLFKSVGDKR-TS-----LPEAKDSFFELTLKS----KLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGY--TWA 585 (640)
Q Consensus 518 ~w~~ll~~l~~~~-~~-----~~~~~~~L~~a~l~~----~L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~--~~i 585 (640)
+..++++.|.+.+ .. ...+.++|+.++-.. .+.++|+ ..|++++..|..|.||||+||..|+ .++
T Consensus 153 v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLL---e~GADVN~kD~~G~TPLH~Aa~~g~~~~eI 229 (764)
T PHA02716 153 IDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLC---NNGVNVNLQNNHLITPLHTYLITGNVCASV 229 (764)
T ss_pred CCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHH---HcCCCCCCCCCCCCCHHHHHHHcCCCCHHH
Confidence 4445555554443 11 223556666543221 2345553 2455555566666666666666663 366
Q ss_pred HHHHHHCCCCcccccCCCCcHHHHH
Q 006569 586 ILLFSWSGLSLDFRDKYGWTALHWA 610 (640)
Q Consensus 586 v~lLL~~Gadin~rD~~G~TpLH~A 610 (640)
|++|+++|+++|.+|..|+||||+|
T Consensus 230 VklLLe~GADVN~kD~~G~TPLh~A 254 (764)
T PHA02716 230 IKKIIELGGDMDMKCVNGMSPIMTY 254 (764)
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 6666666666666666666666654
No 48
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.00 E-value=8e-10 Score=116.53 Aligned_cols=107 Identities=18% Similarity=0.114 Sum_probs=84.6
Q ss_pred HHHHHHhccCCCC-----ccccccHHHHHHHhC---cHHHHHHHHHhcCCCccc-CCCCCCCHHHHHHHhCCHHHHHHHH
Q 006569 520 AYLFKSVGDKRTS-----LPEAKDSFFELTLKS---KLKEWLLERVVEGSKTTE-YDVHGQGVIHLCAMLGYTWAILLFS 590 (640)
Q Consensus 520 ~~ll~~l~~~~~~-----~~~~~~~L~~a~l~~---~L~~~Ll~kl~~g~~~~~-~D~~G~TpLHlAA~lG~~~iv~lLL 590 (640)
-+++..|+|.++= ...+.++++-++|-. ....-.++++..-+++|. ....|||+|.+|+..|..++|+.||
T Consensus 281 F~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAVSHGr~d~vk~LL 360 (452)
T KOG0514|consen 281 FDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALMLAVSHGRVDMVKALL 360 (452)
T ss_pred hHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhhhhhcCcHHHHHHHH
Confidence 3566677665432 123778888776642 222334455666678877 6678999999999999999999999
Q ss_pred HCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 006569 591 WSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQI 626 (640)
Q Consensus 591 ~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~G 626 (640)
..|+|||.+|.+|-|||++||.+||.|+|++||..-
T Consensus 361 acgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p 396 (452)
T KOG0514|consen 361 ACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVP 396 (452)
T ss_pred HccCCCccccCCccHHHhhhhhhChHHHHHHHhccC
Confidence 999999999999999999999999999999999653
No 49
>PHA02795 ankyrin-like protein; Provisional
Probab=99.00 E-value=1.3e-09 Score=120.09 Aligned_cols=113 Identities=15% Similarity=-0.002 Sum_probs=92.8
Q ss_pred ccHHHHHHHhccCCCCc--cccccHHHHHHHhCcH--HHHHHHHHhcCCCccc-C-----CCCCCCHHHHHHHhCCHHHH
Q 006569 517 NSWAYLFKSVGDKRTSL--PEAKDSFFELTLKSKL--KEWLLERVVEGSKTTE-Y-----DVHGQGVIHLCAMLGYTWAI 586 (640)
Q Consensus 517 ~~w~~ll~~l~~~~~~~--~~~~~~L~~a~l~~~L--~~~Ll~kl~~g~~~~~-~-----D~~G~TpLHlAA~lG~~~iv 586 (640)
.+..++++.|.+.+... ....++++.++.+++. .++|+. .|+...+ . +..|.|++|+|+..|+.+++
T Consensus 128 ~n~~eiV~~LI~~GADIn~~~~~t~lh~A~~~~~~eIVk~Lls---~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIv 204 (437)
T PHA02795 128 YVEIDIVDFMVDHGAVIYKIECLNAYFRGICKKESSVVEFILN---CGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIY 204 (437)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHh---cCCcccccccchhhhhhccchhHHHHhcCHHHHH
Confidence 68889999987776653 2347899999987654 488854 4543322 2 23588999999999999999
Q ss_pred HHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 587 LLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 587 ~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
++|+.+|+++|.+|..|+||||+|+..|+.++|++||++|||...+
T Consensus 205 e~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~ 250 (437)
T PHA02795 205 KLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAV 250 (437)
T ss_pred HHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 9999999999999999999999999999999999999999986543
No 50
>PHA02730 ankyrin-like protein; Provisional
Probab=98.99 E-value=8.8e-10 Score=126.80 Aligned_cols=64 Identities=17% Similarity=0.076 Sum_probs=47.7
Q ss_pred cCCCCCCCHHHHHHHhC---CHHHHHHHHHCCCCcccccCCCCcHHHHHHHcC--CHHHHHHHHHhchh
Q 006569 565 EYDVHGQGVIHLCAMLG---YTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG--RYESSSYHIYQISM 628 (640)
Q Consensus 565 ~~D~~G~TpLHlAA~lG---~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~G--h~eiV~lLLs~GaD 628 (640)
.+|..|.||||+|+..| +.++|++|+++||+++++|..|+||||+||..| +.++|++||++||+
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~ 104 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSN 104 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCC
Confidence 36777777777777776 377777777777777777777777777777755 67777777777653
No 51
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.99 E-value=1e-09 Score=130.72 Aligned_cols=89 Identities=19% Similarity=0.138 Sum_probs=73.9
Q ss_pred cccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHc
Q 006569 536 AKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 613 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~ 613 (640)
....|+.++..++.. +.| +..|.+.+..|..|+||||+||..|+.+++++|+.+|+++|.+|.+|+||||+|+..
T Consensus 525 ~~~~L~~Aa~~g~~~~l~~L---l~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~ 601 (823)
T PLN03192 525 MASNLLTVASTGNAALLEEL---LKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISA 601 (823)
T ss_pred chhHHHHHHHcCCHHHHHHH---HHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHh
Confidence 457788888888755 444 335666666999999999999999999999999999999999999999999988888
Q ss_pred CCHHHHHHHHHhch
Q 006569 614 GRYESSSYHIYQIS 627 (640)
Q Consensus 614 Gh~eiV~lLLs~Ga 627 (640)
||.+++++|+..++
T Consensus 602 g~~~iv~~L~~~~~ 615 (823)
T PLN03192 602 KHHKIFRILYHFAS 615 (823)
T ss_pred CCHHHHHHHHhcCc
Confidence 88777777665443
No 52
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.98 E-value=5.5e-10 Score=111.06 Aligned_cols=95 Identities=15% Similarity=0.104 Sum_probs=84.5
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
+.+-++|++|+.++++. ++|++ .|++.....+...++|.+|+..||.++|++|+.+++|||.-|-+|-|||-+|+
T Consensus 158 e~GfTpLiWAaa~G~i~vV~fLL~---~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAv 234 (296)
T KOG0502|consen 158 EFGFTPLIWAAAKGHIPVVQFLLN---SGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAV 234 (296)
T ss_pred ccCchHhHHHHhcCchHHHHHHHH---cCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeee
Confidence 45789999999999987 78753 45444448888899999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHhchhhhh
Q 006569 612 YYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 612 ~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+.||.+||+.||..|||...
T Consensus 235 rgnhvkcve~Ll~sGAd~t~ 254 (296)
T KOG0502|consen 235 RGNHVKCVESLLNSGADVTQ 254 (296)
T ss_pred cCChHHHHHHHHhcCCCccc
Confidence 99999999999999998653
No 53
>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.
Probab=98.97 E-value=3.1e-09 Score=91.16 Aligned_cols=84 Identities=24% Similarity=0.243 Sum_probs=71.1
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEe-CCcccceeeeeCCceeecCCCCCC---ceeEEEEEeCC
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVC-GEVRVPAEFVQAGVYRCFLPPHSP---GLFLLYMSLDG 440 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmF-GdveVpaeiiq~GVLrC~~Pph~p---G~Vpl~Vt~~n 440 (640)
+.|+.|+|.+++..|||+|+|.|.+|... ..+.|+| |+.......+.+..+.|.+|++.. |.|.+.|...+
T Consensus 1 P~I~~i~P~~g~~~GGt~itI~G~~f~~~-----~~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~ 75 (89)
T cd00102 1 PVITSISPSSGPVSGGTEVTITGSNFGSG-----SNLRVTFGGGVPCSVLSVSSTAIVCTTPPYANPGPGPVEVTVDRGN 75 (89)
T ss_pred CEEeEEECCcCCCCCCeEEEEEEECCCCC-----CcEEEEEeCCCeEEEEEecCCEEEEECCCCCCCCcEEEEEEEeCCC
Confidence 47999999999999999999999998762 2689999 898777777789999999999875 88888887766
Q ss_pred CCCcccceeeeec
Q 006569 441 HKPISQVLNFEYR 453 (640)
Q Consensus 441 ~~~~Sev~~FEYr 453 (640)
....+....|+|.
T Consensus 76 ~~~~~~~~~F~Y~ 88 (89)
T cd00102 76 GGITSSPLTFTYV 88 (89)
T ss_pred CcccCCCccEEee
Confidence 3356778889996
No 54
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.96 E-value=3.4e-09 Score=119.01 Aligned_cols=71 Identities=17% Similarity=0.021 Sum_probs=66.2
Q ss_pred hcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchh
Q 006569 558 VEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISM 628 (640)
Q Consensus 558 ~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD 628 (640)
..+++++.+|..|.||||+||..|+.+++++|+.+|+|+|.+|..|+||||+|+..|+.++|+.||.+++.
T Consensus 244 ~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~ 314 (494)
T PHA02989 244 LKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPG 314 (494)
T ss_pred HhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence 35666777999999999999999999999999999999999999999999999999999999999998864
No 55
>PHA02798 ankyrin-like protein; Provisional
Probab=98.96 E-value=3.1e-09 Score=119.14 Aligned_cols=114 Identities=13% Similarity=0.009 Sum_probs=84.7
Q ss_pred ccHHHHHHHhccCCCCc----cccccHHHHHHH-----hCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q 006569 517 NSWAYLFKSVGDKRTSL----PEAKDSFFELTL-----KSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAIL 587 (640)
Q Consensus 517 ~~w~~ll~~l~~~~~~~----~~~~~~L~~a~l-----~~~L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~ 587 (640)
....++++.+.+.+... ..+.+.+++.+. ......-++..+..+++++.+|..|.||||+||..|+.++++
T Consensus 196 ~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~ 275 (489)
T PHA02798 196 RIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFE 275 (489)
T ss_pred cCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHH
Confidence 34567777776665432 224555553211 111111111113345667779999999999999999999999
Q ss_pred HHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhh
Q 006569 588 LFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 588 lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l 630 (640)
+|+..|+|+|.+|..|+||||+|+..|+.++++.|+.++++.-
T Consensus 276 ~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~ 318 (489)
T PHA02798 276 YLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKN 318 (489)
T ss_pred HHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHH
Confidence 9999999999999999999999999999999999999998753
No 56
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.95 E-value=1.2e-09 Score=112.11 Aligned_cols=95 Identities=16% Similarity=0.154 Sum_probs=83.7
Q ss_pred CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHH
Q 006569 532 SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHW 609 (640)
Q Consensus 532 ~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~ 609 (640)
-.+.+-.+|+.++-.++.. +.|+ ..|+.++..+....||||+||..|+.++|..|+...+|+|+.+.+|.||||+
T Consensus 30 gddhgfsplhwaakegh~aivemll---~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhy 106 (448)
T KOG0195|consen 30 GDDHGFSPLHWAAKEGHVAIVEMLL---SRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHY 106 (448)
T ss_pred ccccCcchhhhhhhcccHHHHHHHH---hcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhh
Confidence 3456778899998888754 6774 4688888788888999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHhchhh
Q 006569 610 AAYYGRYESSSYHIYQISMQ 629 (640)
Q Consensus 610 AA~~Gh~eiV~lLLs~GaD~ 629 (640)
||+.|...+++-||+.||.+
T Consensus 107 acfwgydqiaedli~~ga~v 126 (448)
T KOG0195|consen 107 ACFWGYDQIAEDLISCGAAV 126 (448)
T ss_pred hhhhcHHHHHHHHHhcccee
Confidence 99999999999999999754
No 57
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.95 E-value=2.3e-09 Score=124.93 Aligned_cols=85 Identities=20% Similarity=0.168 Sum_probs=75.4
Q ss_pred cHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCC
Q 006569 538 DSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR 615 (640)
Q Consensus 538 ~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh 615 (640)
..|+.++..+++. +.|+ ..|++.+.+|..|.||||+||..|+.+++++|+.+|+++|.+|..|+||||+|+..|+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL---~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~ 160 (664)
T PTZ00322 84 VELCQLAASGDAVGARILL---TGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGF 160 (664)
T ss_pred HHHHHHHHcCCHHHHHHHH---HCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCc
Confidence 3477888888766 4453 3566666699999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 006569 616 YESSSYHIYQ 625 (640)
Q Consensus 616 ~eiV~lLLs~ 625 (640)
.+++++|+.+
T Consensus 161 ~~iv~~Ll~~ 170 (664)
T PTZ00322 161 REVVQLLSRH 170 (664)
T ss_pred HHHHHHHHhC
Confidence 9999999999
No 58
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.94 E-value=1.7e-09 Score=129.25 Aligned_cols=112 Identities=18% Similarity=0.148 Sum_probs=95.0
Q ss_pred cccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q 006569 514 CISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAIL 587 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~ 587 (640)
+.+.+....++.+.+.+.. ...+.++|+.|+-.+++. ++|++ .|++++.+|+.|+||||.||..|+.+++.
T Consensus 514 a~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe---~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~ 590 (1143)
T KOG4177|consen 514 AADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLE---HGADVNAKDKLGYTPLHQAAQQGHNDIAE 590 (1143)
T ss_pred hhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhh---CCccccccCCCCCChhhHHHHcChHHHHH
Confidence 3345555566666544443 334678999999999865 89954 67788889999999999999999999999
Q ss_pred HHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchh
Q 006569 588 LFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISM 628 (640)
Q Consensus 588 lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD 628 (640)
+|+.+|+++|+.|.+|.||||.|++.|+.+++++|+..+++
T Consensus 591 LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 591 LLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred HHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence 99999999999999999999999999999999999999987
No 59
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.94 E-value=2.8e-09 Score=124.61 Aligned_cols=94 Identities=14% Similarity=0.024 Sum_probs=72.4
Q ss_pred cccccHHHHHHHhCc----HHHHHHHHHhcCCCcccCCCCCCCHHHHH--------------------------------
Q 006569 534 PEAKDSFFELTLKSK----LKEWLLERVVEGSKTTEYDVHGQGVIHLC-------------------------------- 577 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~----L~~~Ll~kl~~g~~~~~~D~~G~TpLHlA-------------------------------- 577 (640)
..+.++|+.|+..+. +.++|+ ..|++++.+|..|+||||+|
T Consensus 210 ~~G~TPLH~Aa~~g~~~~eIVklLL---e~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~ 286 (764)
T PHA02716 210 NHLITPLHTYLITGNVCASVIKKII---ELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILH 286 (764)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHH---HcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhH
Confidence 346777777777663 335553 35666555777788888754
Q ss_pred -----HHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHH--cCCHHHHHHHHHhchhhh
Q 006569 578 -----AMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY--YGRYESSSYHIYQISMQL 630 (640)
Q Consensus 578 -----A~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~--~Gh~eiV~lLLs~GaD~l 630 (640)
|..|+.+++++|+.+|+++|.+|..|+||||+|+. .++.++|++||++|||..
T Consensus 287 ~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN 346 (764)
T PHA02716 287 SYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLN 346 (764)
T ss_pred HHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCc
Confidence 45578889999999999999999999999999875 468999999999998754
No 60
>PHA02946 ankyin-like protein; Provisional
Probab=98.94 E-value=4.1e-09 Score=117.34 Aligned_cols=117 Identities=12% Similarity=0.067 Sum_probs=91.7
Q ss_pred cccccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCc--H--HHHHHHHHhcCCCccc-CCCCCCCHHHHHHHh
Q 006569 510 SKSTCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSK--L--KEWLLERVVEGSKTTE-YDVHGQGVIHLCAML 580 (640)
Q Consensus 510 ~k~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~--L--~~~Ll~kl~~g~~~~~-~D~~G~TpLHlAA~l 580 (640)
+...|+..+..++++.|.+.+.. ...+.++|+.++..+. + .++|+ ..|++++. .|..|.|||| ||..
T Consensus 75 pLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl---~~Gadin~~~d~~g~tpL~-aa~~ 150 (446)
T PHA02946 75 PLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLV---QYGAKINNSVDEEGCGPLL-ACTD 150 (446)
T ss_pred HHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHH---HcCCCcccccCCCCCcHHH-HHHC
Confidence 34455567788888888655432 3458899998876543 2 35564 46777765 7899999998 6777
Q ss_pred CCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcC--CHHHHHHHHHhchhhh
Q 006569 581 GYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG--RYESSSYHIYQISMQL 630 (640)
Q Consensus 581 G~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~G--h~eiV~lLLs~GaD~l 630 (640)
|+.+++++|+..|++++.+|..|+||||+|+..+ +.+++++|+++|+|..
T Consensus 151 ~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin 202 (446)
T PHA02946 151 PSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPS 202 (446)
T ss_pred CChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCc
Confidence 9999999999999999999999999999998854 4799999999999754
No 61
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.93 E-value=3.4e-09 Score=123.52 Aligned_cols=94 Identities=12% Similarity=0.042 Sum_probs=59.7
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCC-HHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGY-TWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~-~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
.+.++|+.|+..+++. ++|+ ..|++.+..+..|.||||+|+..+. ..++++|+..|+++|.+|..|+||||+||
T Consensus 374 ~G~TpLh~Aa~~~~~~iv~~Ll---~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa 450 (682)
T PHA02876 374 CDKTPIHYAAVRNNVVIINTLL---DYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYAC 450 (682)
T ss_pred CCCCHHHHHHHcCCHHHHHHHH---HCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHH
Confidence 4667777777666554 4453 2444444466667777777766554 34566777777777777777777777777
Q ss_pred HcC-CHHHHHHHHHhchhhhh
Q 006569 612 YYG-RYESSSYHIYQISMQLV 631 (640)
Q Consensus 612 ~~G-h~eiV~lLLs~GaD~l~ 631 (640)
..| +.+++++|+.+|||...
T Consensus 451 ~~~~~~~iv~lLl~~Gad~n~ 471 (682)
T PHA02876 451 KKNCKLDVIEMLLDNGADVNA 471 (682)
T ss_pred HhCCcHHHHHHHHHCCCCCCC
Confidence 655 56777777777766443
No 62
>PHA02730 ankyrin-like protein; Provisional
Probab=98.85 E-value=7e-09 Score=119.47 Aligned_cols=70 Identities=9% Similarity=-0.041 Sum_probs=50.9
Q ss_pred cCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccC-CCCcHHHHHHHc--CCHHHHHHHHHhchh
Q 006569 559 EGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK-YGWTALHWAAYY--GRYESSSYHIYQISM 628 (640)
Q Consensus 559 ~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~-~G~TpLH~AA~~--Gh~eiV~lLLs~GaD 628 (640)
.|++++.+|+.|.||||+||..++.+++++|+.+|+++|.+|. .|+||||+|+.. |+.+++++||++|++
T Consensus 451 ~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~ 523 (672)
T PHA02730 451 YMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPT 523 (672)
T ss_pred cccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCC
Confidence 4555666777777777777777777777777777777777775 477777777763 677777777777765
No 63
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.85 E-value=1.2e-08 Score=118.90 Aligned_cols=92 Identities=18% Similarity=0.047 Sum_probs=53.3
Q ss_pred ccccHHHHHHHhCcHH---HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 535 EAKDSFFELTLKSKLK---EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~---~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
.+.++|+.|+..+... +.| +..|++.+.+|..|.||||+||..|+.+++++|+.+|++++..+..|.||||+|+
T Consensus 340 ~g~TpLh~A~~~~~~~~iv~lL---l~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~ 416 (682)
T PHA02876 340 LYITPLHQASTLDRNKDIVITL---LELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFAL 416 (682)
T ss_pred CCCcHHHHHHHhCCcHHHHHHH---HHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHH
Confidence 3556666665533211 223 2344444446666666666666666666666666666666666666666666666
Q ss_pred HcCC-HHHHHHHHHhchhh
Q 006569 612 YYGR-YESSSYHIYQISMQ 629 (640)
Q Consensus 612 ~~Gh-~eiV~lLLs~GaD~ 629 (640)
..++ ..++++|+.+|+|.
T Consensus 417 ~~~~~~~~vk~Ll~~gadi 435 (682)
T PHA02876 417 CGTNPYMSVKTLIDRGANV 435 (682)
T ss_pred HcCCHHHHHHHHHhCCCCC
Confidence 5443 34566666666653
No 64
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.84 E-value=1.3e-08 Score=98.13 Aligned_cols=94 Identities=24% Similarity=0.293 Sum_probs=65.2
Q ss_pred cccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCC-----HHHHHHHHHCCC---CcccccCCCCc
Q 006569 536 AKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGY-----TWAILLFSWSGL---SLDFRDKYGWT 605 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~-----~~iv~lLL~~Ga---din~rD~~G~T 605 (640)
....++.+....... .++ +..+...+..|..|.||||+|+..|+ .+++++|+..|+ ..+.+|..|+|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~t 149 (235)
T COG0666 73 GRLPLHSAASKGDDKIVKLL---LASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNT 149 (235)
T ss_pred ccCHHHHHHHcCcHHHHHHH---HHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCc
Confidence 456666665555433 234 33455554477788888888888887 788888888888 45556888888
Q ss_pred HHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 606 ALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 606 pLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
|||||+..|+.+++++|+..|++...+
T Consensus 150 pl~~A~~~~~~~~~~~ll~~~~~~~~~ 176 (235)
T COG0666 150 PLHWAALNGDADIVELLLEAGADPNSR 176 (235)
T ss_pred hhHHHHHcCchHHHHHHHhcCCCCccc
Confidence 888888888888888888887765544
No 65
>PHA02917 ankyrin-like protein; Provisional
Probab=98.83 E-value=1.2e-08 Score=118.86 Aligned_cols=112 Identities=13% Similarity=0.054 Sum_probs=85.8
Q ss_pred cccccHHHHHHHhccCCCC----ccccccHHHHHHHh--Cc--HHHHHHHHHhcCCCcccCC---CCC-----------C
Q 006569 514 CISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLK--SK--LKEWLLERVVEGSKTTEYD---VHG-----------Q 571 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~--~~--L~~~Ll~kl~~g~~~~~~D---~~G-----------~ 571 (640)
++..+..++++.|.+.+.. ...++++|+.++.. ++ +.++|+ ..|++++..| ..| .
T Consensus 110 a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi---~~Ga~vn~~d~~~~~g~~~~~~~~~~~~ 186 (661)
T PHA02917 110 KSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFI---ENGCSVLYEDEDDEYGYAYDDYQPRNCG 186 (661)
T ss_pred HhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHH---HcCCCccccccccccccccccccccccc
Confidence 4456778888888666543 34588999876543 23 447775 3676665333 334 5
Q ss_pred CHHHHHHH-----------hCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCH--HHHHHHHHhchhh
Q 006569 572 GVIHLCAM-----------LGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRY--ESSSYHIYQISMQ 629 (640)
Q Consensus 572 TpLHlAA~-----------lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~--eiV~lLLs~GaD~ 629 (640)
||||+|+. .|+.+++++|+.+|+++|.+|.+|+||||+|+..|+. ++|++|+ +|+|.
T Consensus 187 t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li-~g~d~ 256 (661)
T PHA02917 187 TVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLM-KGIDN 256 (661)
T ss_pred cHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHH-hCCcc
Confidence 99999986 5689999999999999999999999999999999995 7999997 48764
No 66
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.82 E-value=2.5e-08 Score=87.53 Aligned_cols=89 Identities=26% Similarity=0.319 Sum_probs=74.4
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~ 612 (640)
.+.++|+.++..+... ++|++ .+...+..+..|.||||+|+..+..++++.|+..|++++..+..|.||+|+|+.
T Consensus 6 ~g~t~l~~a~~~~~~~~i~~li~---~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~ 82 (126)
T cd00204 6 DGRTPLHLAASNGHLEVVKLLLE---NGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR 82 (126)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHH---cCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 4678888888887754 56643 344445588889999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhc
Q 006569 613 YGRYESSSYHIYQI 626 (640)
Q Consensus 613 ~Gh~eiV~lLLs~G 626 (640)
.++.+++++|+.+|
T Consensus 83 ~~~~~~~~~L~~~~ 96 (126)
T cd00204 83 NGNLDVVKLLLKHG 96 (126)
T ss_pred cCcHHHHHHHHHcC
Confidence 99999999999987
No 67
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.81 E-value=9.2e-09 Score=105.77 Aligned_cols=98 Identities=16% Similarity=0.122 Sum_probs=79.8
Q ss_pred cccccHHHHHHHhCcHHHHHHHHHhcCCC-cccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCccc-ccCCCCcHHHHHH
Q 006569 534 PEAKDSFFELTLKSKLKEWLLERVVEGSK-TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDF-RDKYGWTALHWAA 611 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~~~Ll~kl~~g~~-~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~-rD~~G~TpLH~AA 611 (640)
+....+|++++-++....++- +..+.. ++.+|..|+++|..||..|+.+++++|+..|+|||. ++..++||||+||
T Consensus 10 d~~~~~Lle~i~Kndt~~a~~--LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAA 87 (396)
T KOG1710|consen 10 DAPKSPLLEAIDKNDTEAALA--LLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAA 87 (396)
T ss_pred cchhhHHHHHHccCcHHHHHH--HHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHH
Confidence 445678999999988875442 222333 455899999999999999999999999999999986 7889999999999
Q ss_pred HcCCHHHHHHHHHhchhhhhhh
Q 006569 612 YYGRYESSSYHIYQISMQLVRL 633 (640)
Q Consensus 612 ~~Gh~eiV~lLLs~GaD~l~r~ 633 (640)
..|+.++.++|+..||...+-.
T Consensus 88 LSGn~dvcrllldaGa~~~~vN 109 (396)
T KOG1710|consen 88 LSGNQDVCRLLLDAGARMYLVN 109 (396)
T ss_pred HcCCchHHHHHHhccCcccccc
Confidence 9999999999999998654443
No 68
>PHA02792 ankyrin-like protein; Provisional
Probab=98.80 E-value=1.5e-08 Score=115.89 Aligned_cols=110 Identities=15% Similarity=0.049 Sum_probs=80.1
Q ss_pred HHHHHHHhccCCCCcc--ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCC--CCHHHHHHHhCCHH---HHHHH
Q 006569 519 WAYLFKSVGDKRTSLP--EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHG--QGVIHLCAMLGYTW---AILLF 589 (640)
Q Consensus 519 w~~ll~~l~~~~~~~~--~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G--~TpLHlAA~lG~~~---iv~lL 589 (640)
.-++++.+.+.+.... ...+.++.++.++... ++|+ ..|++++.+|..| .||||+|+...... ++++|
T Consensus 320 ~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLI---s~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklL 396 (631)
T PHA02792 320 YINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYIL---KNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLC 396 (631)
T ss_pred cHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHH---HcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHH
Confidence 4456666666655432 2455678887766544 7774 3577776677664 68888877665543 46788
Q ss_pred HHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 590 SWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 590 L~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+.+|+++|.+|..|+||||+|+..++.+++++|+++|||...
T Consensus 397 Is~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~ 438 (631)
T PHA02792 397 KPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINI 438 (631)
T ss_pred HhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 889999999999999999999999999999999999987543
No 69
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.79 E-value=6.3e-09 Score=114.42 Aligned_cols=76 Identities=28% Similarity=0.480 Sum_probs=65.7
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchh
Q 006569 549 LKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISM 628 (640)
Q Consensus 549 L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD 628 (640)
..+|+. .|......+..|.|.||.|+.+||.++.++|+.+|.+++.+|.+||||||.||..|+.+++++|+.+|+|
T Consensus 181 ~~q~l~----~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~ 256 (527)
T KOG0505|consen 181 ARQWLN----AGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGAD 256 (527)
T ss_pred HHHHHh----ccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcc
Confidence 446662 3333333555599999999999999999999999999999999999999999999999999999999986
No 70
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.78 E-value=2.3e-08 Score=117.78 Aligned_cols=118 Identities=17% Similarity=0.046 Sum_probs=87.7
Q ss_pred ccccccHHHHHHHhccCCCCccccccHHHHHHHhCc-HHHHHHHHHhcCCCc-------c----cCCCCCCCHHHHHHHh
Q 006569 513 TCISNSWAYLFKSVGDKRTSLPEAKDSFFELTLKSK-LKEWLLERVVEGSKT-------T----EYDVHGQGVIHLCAML 580 (640)
Q Consensus 513 ~a~~~~w~~ll~~l~~~~~~~~~~~~~L~~a~l~~~-L~~~Ll~kl~~g~~~-------~----~~D~~G~TpLHlAA~l 580 (640)
.|..++..++++.+...+.....+.++|+.++.... ..+.++..+...... + .....|.||||+||..
T Consensus 59 ~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~ 138 (743)
T TIGR00870 59 AAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHR 138 (743)
T ss_pred HHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHh
Confidence 455688899999887776544568888988876321 122233222222211 1 1235799999999999
Q ss_pred CCHHHHHHHHHCCCCccccc--------------CCCCcHHHHHHHcCCHHHHHHHHHhchhhh
Q 006569 581 GYTWAILLFSWSGLSLDFRD--------------KYGWTALHWAAYYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 581 G~~~iv~lLL~~Gadin~rD--------------~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l 630 (640)
|+.++|++|+.+|+++|.++ .+|.||||+|+..|+.+++++|+.+|||..
T Consensus 139 ~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin 202 (743)
T TIGR00870 139 QNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADIL 202 (743)
T ss_pred CCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchh
Confidence 99999999999999999764 369999999999999999999999996644
No 71
>PHA02917 ankyrin-like protein; Provisional
Probab=98.76 E-value=3e-08 Score=115.46 Aligned_cols=73 Identities=15% Similarity=0.130 Sum_probs=67.5
Q ss_pred HhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHH-cCCHHHHHHHHHhchhh
Q 006569 557 VVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY-YGRYESSSYHIYQISMQ 629 (640)
Q Consensus 557 l~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~-~Gh~eiV~lLLs~GaD~ 629 (640)
+..|++++.+|..|.||||+|+..+..+++++|+.+|+++|.+|..|+||||+|+. .++.+++++|+++|++.
T Consensus 439 l~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i 512 (661)
T PHA02917 439 LPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPTL 512 (661)
T ss_pred HHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCh
Confidence 34677777799999999999999999999999999999999999999999999996 78999999999999865
No 72
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.73 E-value=1.4e-08 Score=111.75 Aligned_cols=95 Identities=24% Similarity=0.291 Sum_probs=79.9
Q ss_pred cHHHHHHHhCcHHH--HHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCC
Q 006569 538 DSFFELTLKSKLKE--WLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR 615 (640)
Q Consensus 538 ~~L~~a~l~~~L~~--~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh 615 (640)
..+++++..+.+.+ .| +..|+.++..+.+|.|+||-||.-.+.++|++|+++|++||..|..||||||-||.+||
T Consensus 42 a~~l~A~~~~d~~ev~~l---l~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~ 118 (527)
T KOG0505|consen 42 AVFLEACSRGDLEEVRKL---LNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGY 118 (527)
T ss_pred HHHHhccccccHHHHHHH---hccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhccccc
Confidence 44667777776663 33 23444444488999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhhhhhhcc
Q 006569 616 YESSSYHIYQISMQLVRLSL 635 (640)
Q Consensus 616 ~eiV~lLLs~GaD~l~r~gl 635 (640)
..+|++||++||+.+.-.+=
T Consensus 119 ~~i~~~li~~gA~~~avNsd 138 (527)
T KOG0505|consen 119 LNIVEYLIQHGANLLAVNSD 138 (527)
T ss_pred HHHHHHHHHhhhhhhhccCC
Confidence 99999999999997765443
No 73
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=98.72 E-value=2.6e-08 Score=96.18 Aligned_cols=87 Identities=14% Similarity=0.083 Sum_probs=73.1
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
.++.++|+.|+.++++. +-| +..|++...+...|+||||-||...+.+++.+||.+|+|||+..+..+||||.||
T Consensus 95 ~D~YTpLHRAaYn~h~div~~l---l~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa 171 (228)
T KOG0512|consen 95 EDEYTPLHRAAYNGHLDIVHEL---LLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAA 171 (228)
T ss_pred cccccHHHHHHhcCchHHHHHH---HHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhh
Confidence 45789999999999876 333 3456665558899999999999999999999999999999999999999999999
Q ss_pred HcCCH-HHHHHHH
Q 006569 612 YYGRY-ESSSYHI 623 (640)
Q Consensus 612 ~~Gh~-eiV~lLL 623 (640)
...+. .++.+|+
T Consensus 172 ~~rn~r~t~~~Ll 184 (228)
T KOG0512|consen 172 GNRNSRDTLELLL 184 (228)
T ss_pred cccchHHHHHHHh
Confidence 87654 4555554
No 74
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.70 E-value=3.6e-08 Score=112.72 Aligned_cols=93 Identities=17% Similarity=0.139 Sum_probs=78.9
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHH-CCC-CcccccCCCCcHHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SGL-SLDFRDKYGWTALHWA 610 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~-~Ga-din~rD~~G~TpLH~A 610 (640)
++-++|++++-.+... +-| +..|+.++.+++++.||||.||..|...+|+-||. .|. .+|..|-.|.||||.|
T Consensus 272 dg~tpLH~a~r~G~~~svd~L---l~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHla 348 (929)
T KOG0510|consen 272 DGCTPLHYAARQGGPESVDNL---LGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLA 348 (929)
T ss_pred cCCchHHHHHHcCChhHHHHH---HHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhh
Confidence 4678999999888877 444 34677777788999999999999999999998887 554 4588999999999999
Q ss_pred HHcCCHHHHHHHHHhchhhh
Q 006569 611 AYYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 611 A~~Gh~eiV~lLLs~GaD~l 630 (640)
+..||.+++++||.+||+.+
T Consensus 349 a~~gH~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 349 AKSGHDRVVQLLLNKGALFL 368 (929)
T ss_pred hhcCHHHHHHHHHhcChhhh
Confidence 99999999999999999877
No 75
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.69 E-value=3e-08 Score=84.85 Aligned_cols=55 Identities=24% Similarity=0.239 Sum_probs=51.5
Q ss_pred HHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 574 IHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 574 LHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
||+||..|+.++++.|+..+.+++. |.||||+||..|+.+++++|+++|+|...+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 55 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQ 55 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-B
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhccccccc
Confidence 8999999999999999999999987 999999999999999999999999987665
No 76
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.68 E-value=8.3e-08 Score=92.45 Aligned_cols=97 Identities=24% Similarity=0.274 Sum_probs=82.7
Q ss_pred ccCCCCccccccHHHHHHHhCc-----HH--HHHHHHHhcCC--Cccc-CCCCCCCHHHHHHHhCCHHHHHHHHHCCCCc
Q 006569 527 GDKRTSLPEAKDSFFELTLKSK-----LK--EWLLERVVEGS--KTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSL 596 (640)
Q Consensus 527 ~~~~~~~~~~~~~L~~a~l~~~-----L~--~~Ll~kl~~g~--~~~~-~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadi 596 (640)
.+.......+.++++.++..++ .. +.|+ ..|+ .... .|..|.||||+|+..|+..++++|+..|+++
T Consensus 97 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll---~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~ 173 (235)
T COG0666 97 ADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLL---EAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADP 173 (235)
T ss_pred CCcccccCCCCcHHHHHHhcCCcccchHHHHHHHH---HcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCC
Confidence 3334445668899999999998 44 4553 3555 3555 6999999999999999999999999999999
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 006569 597 DFRDKYGWTALHWAAYYGRYESSSYHIYQI 626 (640)
Q Consensus 597 n~rD~~G~TpLH~AA~~Gh~eiV~lLLs~G 626 (640)
+.++..|+|+|++|+..++.++++.|+..+
T Consensus 174 ~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 174 NSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred cccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 999999999999999999999999999975
No 77
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.64 E-value=4.2e-08 Score=97.88 Aligned_cols=92 Identities=17% Similarity=0.022 Sum_probs=77.1
Q ss_pred cccHHHHHHHhCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCC
Q 006569 536 AKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR 615 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh 615 (640)
...++..++-+.+|..-++ .....++..|+.|.|||.+||+.|+..+|++|+..|++++..-+...|||..|++.|.
T Consensus 129 p~s~~slsVhql~L~~~~~---~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggy 205 (296)
T KOG0502|consen 129 PWSPLSLSVHQLHLDVVDL---LVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGY 205 (296)
T ss_pred cCChhhHHHHHHHHHHHHH---HhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCCh
Confidence 4456666666665554331 1335667799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhhh
Q 006569 616 YESSSYHIYQISMQL 630 (640)
Q Consensus 616 ~eiV~lLLs~GaD~l 630 (640)
.++|++||..+.|+.
T Consensus 206 tdiV~lLL~r~vdVN 220 (296)
T KOG0502|consen 206 TDIVELLLTREVDVN 220 (296)
T ss_pred HHHHHHHHhcCCCcc
Confidence 999999999997643
No 78
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.64 E-value=1.8e-08 Score=80.31 Aligned_cols=45 Identities=31% Similarity=0.422 Sum_probs=26.1
Q ss_pred HHHCC-CCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhhh
Q 006569 589 FSWSG-LSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVRL 633 (640)
Q Consensus 589 LL~~G-adin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r~ 633 (640)
||++| +++|.+|..|.|||||||.+|+.++|++||.+|+|...+.
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d 46 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKD 46 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCc
Confidence 57778 9999999999999999999999999999999999866553
No 79
>PHA02792 ankyrin-like protein; Provisional
Probab=98.63 E-value=8.7e-08 Score=109.69 Aligned_cols=113 Identities=10% Similarity=0.035 Sum_probs=85.7
Q ss_pred cccccHHHHHHHhccCCCCcc----c--cccHHHHHHHhCcH-----HHHHHHHHhcCCCcccCCCCCCCHHHHHHHhCC
Q 006569 514 CISNSWAYLFKSVGDKRTSLP----E--AKDSFFELTLKSKL-----KEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGY 582 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~~~----~--~~~~L~~a~l~~~L-----~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~ 582 (640)
++..+..++++.|...+.... . +.++|+.+.....- .++| +..|++++.+|..|.||||+|+..|+
T Consensus 346 Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklL---Is~GADIN~kD~~G~TPLh~Aa~~~n 422 (631)
T PHA02792 346 KFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLC---KPYIDDINKIDKHGRSILYYCIESHS 422 (631)
T ss_pred HHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHH---HhcCCccccccccCcchHHHHHHcCC
Confidence 345677788888866554421 1 24778765544332 2333 34567777799999999999999999
Q ss_pred HHHHHHHHHCCCCcccccCCCCcHHHHHHH----------cCCHHHHHHHHHhchhh
Q 006569 583 TWAILLFSWSGLSLDFRDKYGWTALHWAAY----------YGRYESSSYHIYQISMQ 629 (640)
Q Consensus 583 ~~iv~lLL~~Gadin~rD~~G~TpLH~AA~----------~Gh~eiV~lLLs~GaD~ 629 (640)
.+++++|+.+|+++|.+|..|.||||+|+. ....+++++||++|++.
T Consensus 423 ~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i 479 (631)
T PHA02792 423 VSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTI 479 (631)
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence 999999999999999999999999999986 22356789999998664
No 80
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.58 E-value=1.1e-07 Score=104.99 Aligned_cols=91 Identities=24% Similarity=0.303 Sum_probs=76.0
Q ss_pred cccHHHHHHHhCcHHHHHHHHHhcCCC--ccc--CCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 536 AKDSFFELTLKSKLKEWLLERVVEGSK--TTE--YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~~~Ll~kl~~g~~--~~~--~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
.-.+|+.|+..+++...++- +..|.. +++ .+.+|+|+||+||..|+..+.++|+++|+|+-.+|.+|+|||.||-
T Consensus 624 lgqqLl~A~~~~Dl~t~~lL-LAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar 702 (749)
T KOG0705|consen 624 LGQQLLRAVAAEDLQTAILL-LAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYAR 702 (749)
T ss_pred hHHHHHHHHHHHHHHHHHHH-HhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHh
Confidence 55688888888888853331 334432 233 5667899999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHhch
Q 006569 612 YYGRYESSSYHIYQIS 627 (640)
Q Consensus 612 ~~Gh~eiV~lLLs~Ga 627 (640)
..|..+++.+||.+|+
T Consensus 703 ~a~sqec~d~llq~gc 718 (749)
T KOG0705|consen 703 QAGSQECIDVLLQYGC 718 (749)
T ss_pred hcccHHHHHHHHHcCC
Confidence 9999999999999885
No 81
>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.58 E-value=3.2e-07 Score=79.48 Aligned_cols=85 Identities=21% Similarity=0.235 Sum_probs=65.1
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCC-CceeEEEEEeCCCC-
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS-PGLFLLYMSLDGHK- 442 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~-pG~Vpl~Vt~~n~~- 442 (640)
+.|+.|+|.+|+..|||.|+|.|.+|... .....|.||+.+....-+.+..+.|.+|+.. +|..++.|.-++..
T Consensus 1 P~I~~i~P~~g~~~Ggt~vtI~G~~f~~~----~~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~ 76 (90)
T cd00603 1 PVITSISPSSGPLSGGTRLTITGSNLGSG----SPRVRVTVGGVPCKVLNVSSTEIVCRTPAAATPGEGPVEVTVDGANV 76 (90)
T ss_pred CeEEEEcCCCCCCCCCeEEEEEEECCCCC----CceEEEEECCEECcEEecCCCEEEEECCCCCCCCcEeEEEEECCccc
Confidence 47999999999999999999999998773 2368999999876666667899999999977 32344555544442
Q ss_pred --Ccccceeeeec
Q 006569 443 --PISQVLNFEYR 453 (640)
Q Consensus 443 --~~Sev~~FEYr 453 (640)
..+....|+|.
T Consensus 77 ~~~~~~~~~F~Y~ 89 (90)
T cd00603 77 SARVLSNTTFTYV 89 (90)
T ss_pred cccccCCcceEEe
Confidence 24556678885
No 82
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.53 E-value=1e-07 Score=98.17 Aligned_cols=65 Identities=20% Similarity=0.097 Sum_probs=62.3
Q ss_pred CCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhh
Q 006569 566 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 566 ~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l 630 (640)
-|..|.+|||+||+.|+..+++.|+.+|+.+|..+...-||||+||.+||.++|..||+.-||+.
T Consensus 30 gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvn 94 (448)
T KOG0195|consen 30 GDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVN 94 (448)
T ss_pred ccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccc
Confidence 77889999999999999999999999999999999999999999999999999999999998754
No 83
>smart00429 IPT ig-like, plexins, transcription factors.
Probab=98.53 E-value=3.3e-07 Score=79.28 Aligned_cols=84 Identities=25% Similarity=0.291 Sum_probs=66.6
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeee--eCCceeecCCCCC--CceeEE-EEEeC
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFV--QAGVYRCFLPPHS--PGLFLL-YMSLD 439 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeii--q~GVLrC~~Pph~--pG~Vpl-~Vt~~ 439 (640)
+.|+.|+|.+++..|||+|+|+|..|.. .....|.|+...+++.++ .+..+.|.+|+.. ++.+++ .+...
T Consensus 2 P~I~~i~P~~g~~~GGt~iti~G~nf~~-----~~~~~~~~~~~~~~c~~~~~~~~~i~C~tp~~~~~~~~~~v~~v~~~ 76 (90)
T smart00429 2 PVITRISPTSGPVSGGTEITLCGKNLDS-----ISVVFVEVGVGEAPCTFLPSSSTAIVCKTPPYHTIPGSVPVREVGLR 76 (90)
T ss_pred CEEEEEccCcCcCCCCeEEEEeeecCCc-----ceEEEEEEEeCCEEeEEeCCcceEEEEECCCCCCCCCCcCeEEEEEe
Confidence 5899999999999999999999998876 346778888767777776 4688999999864 788888 77776
Q ss_pred CCCCcccceeeeec
Q 006569 440 GHKPISQVLNFEYR 453 (640)
Q Consensus 440 n~~~~Sev~~FEYr 453 (640)
+...-++...|+|.
T Consensus 77 ~~~~~~~~~~f~y~ 90 (90)
T smart00429 77 NGGVPSSPQPFTYV 90 (90)
T ss_pred CCCccCcccCeEEC
Confidence 66544555668773
No 84
>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.52 E-value=4e-07 Score=80.39 Aligned_cols=88 Identities=14% Similarity=0.047 Sum_probs=68.2
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcc-cce--eeeeCCceeecCCCCCC--ceeEEEEEeC
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVR-VPA--EFVQAGVYRCFLPPHSP--GLFLLYMSLD 439 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdve-Vpa--eiiq~GVLrC~~Pph~p--G~Vpl~Vt~~ 439 (640)
+.|++|+|..|+..|||+|+|.|.+|..... .....+++|+.+ .+. .......+.|.+||+.+ +..++.|.-+
T Consensus 1 P~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~~--~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~~~~~~~~V~V~v~ 78 (94)
T cd01180 1 PVITEFFPLSGPLEGGTRLTICGSNLGLRKN--DVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAGNPVFNGPVEVTVG 78 (94)
T ss_pred CeeEEEeCCCCCCCCCEEEEEEEEcCCCCcc--cceeEEEECCEECcccCCCcCcCCEEEEECCCCCCCCcceEEEEEEC
Confidence 4799999999999999999999999976321 245789999984 222 25567789999999873 7888888887
Q ss_pred CCC-CcccceeeeecC
Q 006569 440 GHK-PISQVLNFEYRS 454 (640)
Q Consensus 440 n~~-~~Sev~~FEYr~ 454 (640)
+.. .++.-..|+|.+
T Consensus 79 ~~~~~~~~~~~F~Y~~ 94 (94)
T cd01180 79 HGSFRTESSEGFSFVD 94 (94)
T ss_pred CceecccccCceEEeC
Confidence 763 456667899864
No 85
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.52 E-value=2.5e-07 Score=97.97 Aligned_cols=89 Identities=18% Similarity=0.139 Sum_probs=78.3
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHH-CCCCcccccCCCCcHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALHWA 610 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~-~Gadin~rD~~G~TpLH~A 610 (640)
..+.+.|+-|+..++.. +.|+ ..|+++|..|.+|.|+|.+||..||.+++++||. .++|+...|.+|-|||.+|
T Consensus 338 Q~gQTALMLAVSHGr~d~vk~LL---acgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IA 414 (452)
T KOG0514|consen 338 QHGQTALMLAVSHGRVDMVKALL---ACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIA 414 (452)
T ss_pred hhcchhhhhhhhcCcHHHHHHHH---HccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhH
Confidence 45789999999988865 6663 4677888899999999999999999999998886 5899999999999999999
Q ss_pred HHcCCHHHHHHHHHh
Q 006569 611 AYYGRYESSSYHIYQ 625 (640)
Q Consensus 611 A~~Gh~eiV~lLLs~ 625 (640)
-..||.||.-+|-.+
T Consensus 415 leagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 415 LEAGHREIAVMLYAH 429 (452)
T ss_pred HhcCchHHHHHHHHH
Confidence 999999998888654
No 86
>PF13606 Ank_3: Ankyrin repeat
Probab=98.47 E-value=1.1e-07 Score=66.71 Aligned_cols=28 Identities=32% Similarity=0.259 Sum_probs=25.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhchhh
Q 006569 602 YGWTALHWAAYYGRYESSSYHIYQISMQ 629 (640)
Q Consensus 602 ~G~TpLH~AA~~Gh~eiV~lLLs~GaD~ 629 (640)
+|+||||+||+.|+.++|++||++|+|+
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 5899999999999999999999999885
No 87
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.46 E-value=1.7e-06 Score=75.90 Aligned_cols=87 Identities=28% Similarity=0.359 Sum_probs=74.5
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
..+.++++.++..+... ++|+. .+...+..+..|.||+|+|+..++..++++|+.+|.+++..|..|.|||++|.
T Consensus 38 ~~g~~~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~ 114 (126)
T cd00204 38 NDGRTPLHLAAKNGHLEIVKLLLE---KGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAA 114 (126)
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHH---cCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 35778999999998765 55543 34344447788999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHH
Q 006569 612 YYGRYESSSYHI 623 (640)
Q Consensus 612 ~~Gh~eiV~lLL 623 (640)
..++.+++++|+
T Consensus 115 ~~~~~~~~~~Ll 126 (126)
T cd00204 115 KNGHLEVVKLLL 126 (126)
T ss_pred hcCCHHHHHHhC
Confidence 999999999885
No 88
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.40 E-value=1.6e-07 Score=106.78 Aligned_cols=94 Identities=20% Similarity=0.149 Sum_probs=53.8
Q ss_pred cccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHc
Q 006569 536 AKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 613 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~ 613 (640)
+-+.|+.++++++.. ..|++ ..+...-+|..|++|||+||-.|+.+++++|+.++..+|.....|.||||.||.+
T Consensus 49 gfTalhha~Lng~~~is~llle---~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqh 125 (854)
T KOG0507|consen 49 GFTLLHHAVLNGQNQISKLLLD---YEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQH 125 (854)
T ss_pred chhHHHHHHhcCchHHHHHHhc---chhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhh
Confidence 445566666665544 22211 1122222455666666666666666666666666666666666666666666666
Q ss_pred CCHHHHHHHHHhchhhhhh
Q 006569 614 GRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 614 Gh~eiV~lLLs~GaD~l~r 632 (640)
||.++|.+||.+|+|...|
T Consensus 126 gh~dvv~~Ll~~~adp~i~ 144 (854)
T KOG0507|consen 126 GHLEVVFYLLKKNADPFIR 144 (854)
T ss_pred cchHHHHHHHhcCCCcccc
Confidence 6666666666666655444
No 89
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.34 E-value=8.7e-07 Score=104.53 Aligned_cols=91 Identities=16% Similarity=0.182 Sum_probs=73.6
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccC--------------CCCCCCHHHHHHHhCCHHHHHHHHHCCCCccc
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEY--------------DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDF 598 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~--------------D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~ 598 (640)
.+.++|+.|+..++.. +.|+ ..|++++.+ ...|.||||+|+..|+.+++++|+.+|+|+|.
T Consensus 127 ~G~TpLhlAa~~~~~eiVklLL---~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~ 203 (743)
T TIGR00870 127 PGITALHLAAHRQNYEIVKLLL---ERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILT 203 (743)
T ss_pred CCCcHHHHHHHhCCHHHHHHHH---hCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh
Confidence 4889999999999866 6664 356655432 13699999999999999999999999999999
Q ss_pred ccCCCCcHHHHHHHcC---------CHHHHHHHHHhchh
Q 006569 599 RDKYGWTALHWAAYYG---------RYESSSYHIYQISM 628 (640)
Q Consensus 599 rD~~G~TpLH~AA~~G---------h~eiV~lLLs~GaD 628 (640)
+|..|+||||+|+..+ ...+.++++..+++
T Consensus 204 ~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~ 242 (743)
T TIGR00870 204 ADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDK 242 (743)
T ss_pred HhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999987 33455666655543
No 90
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.30 E-value=4.4e-07 Score=64.48 Aligned_cols=30 Identities=23% Similarity=0.128 Sum_probs=18.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 602 YGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 602 ~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+|+|||||||..|+.++|++||.+|||...
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~ 30 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINA 30 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCC
Confidence 356666666666666666666666665543
No 91
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.28 E-value=3.3e-07 Score=104.67 Aligned_cols=65 Identities=23% Similarity=0.320 Sum_probs=61.3
Q ss_pred ccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccC-CCCcHHHHHHHcCCHHHHHHHHHhchh
Q 006569 564 TEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK-YGWTALHWAAYYGRYESSSYHIYQISM 628 (640)
Q Consensus 564 ~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~-~G~TpLH~AA~~Gh~eiV~lLLs~GaD 628 (640)
+.+|..|+|+||+|+..|...+++.||.+|++++.+|. .||||||-|.++||.+++-+||++|+-
T Consensus 46 nikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S 111 (1267)
T KOG0783|consen 46 NIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRS 111 (1267)
T ss_pred hHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCc
Confidence 34899999999999999999999999999999999996 799999999999999999999999963
No 92
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.27 E-value=1.1e-06 Score=62.43 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=31.4
Q ss_pred CCCCHHHHHHHhCCHHHHHHHHHCCCCcccccC
Q 006569 569 HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK 601 (640)
Q Consensus 569 ~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~ 601 (640)
+|.||||+||..|+.+++++|+.+|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999999885
No 93
>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.26 E-value=3.3e-06 Score=75.50 Aligned_cols=73 Identities=25% Similarity=0.394 Sum_probs=56.9
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCc-ccceeeeeCCceeecCCCCCC-------ceeEEEE
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-RVPAEFVQAGVYRCFLPPHSP-------GLFLLYM 436 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdv-eVpaeiiq~GVLrC~~Pph~p-------G~Vpl~V 436 (640)
++|++++|.|+|.+|||.|+|+|..|.. +....+.++||+. .++..+..+..++|.+|+... +..++.+
T Consensus 1 P~I~~i~P~~g~~SGGt~itV~G~~Lds---~q~p~~~V~~~~~~~~~C~v~s~~~i~C~tP~~~~~~~~~~~~~~~~~~ 77 (99)
T cd01181 1 PTITRIEPEWSFLSGGTPITVTGTNLNT---VQEPRIRVKYGGVEKTSCKVRNSTLMTCPAPSLALLNRSPEPGERPVEF 77 (99)
T ss_pred CEEEEeccCCCccCCCEEEEEEeeccCc---ccccEEEEEECCceeccceeCCCCEEEeCCCCCcccccccCCCCcCeEE
Confidence 4799999999999999999999999976 2233688899995 356667788899999997653 4555555
Q ss_pred EeCC
Q 006569 437 SLDG 440 (640)
Q Consensus 437 t~~n 440 (640)
..++
T Consensus 78 ~fd~ 81 (99)
T cd01181 78 GLDG 81 (99)
T ss_pred EEec
Confidence 5443
No 94
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.23 E-value=1.3e-06 Score=102.07 Aligned_cols=61 Identities=18% Similarity=0.048 Sum_probs=57.1
Q ss_pred CHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 572 GVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 572 TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+.||.||..|+.+++++|+..|+++|.+|..|+||||+||..|+.++|++||.+|+|...+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~ 144 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLL 144 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCC
Confidence 4589999999999999999999999999999999999999999999999999999986543
No 95
>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain. Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d
Probab=98.22 E-value=6.5e-06 Score=71.00 Aligned_cols=79 Identities=14% Similarity=0.055 Sum_probs=67.8
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCCCceeEEEEEeCCCCCc
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPI 444 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~pG~Vpl~Vt~~n~~~~ 444 (640)
+.|..++|.-|.. |++|+|+|+.|... .-.++||+.+.+...|.+..+.|.+|.+.+|..++.|+..++. -
T Consensus 3 P~I~~i~P~~g~~--G~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~vP~~~aG~~~V~V~~~~G~-~ 73 (81)
T cd02849 3 PLIGHVGPMMGKA--GNTVTISGEGFGSA------PGTVYFGTTAATVISWSDTRIVVTVPNVPAGNYDVTVKTADGA-T 73 (81)
T ss_pred CEEeeEcCCCCCC--CCEEEEEEECCCCC------CcEEEECCEEeEEEEECCCEEEEEeCCCCCceEEEEEEeCCCc-c
Confidence 6899999999987 88999999999752 3578999999888899999999999999999999999987553 3
Q ss_pred ccceeeee
Q 006569 445 SQVLNFEY 452 (640)
Q Consensus 445 Sev~~FEY 452 (640)
|....|+|
T Consensus 74 Sn~~~f~~ 81 (81)
T cd02849 74 SNGYNFEV 81 (81)
T ss_pred cCcEeeEC
Confidence 66666764
No 96
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.19 E-value=5.5e-06 Score=85.71 Aligned_cols=89 Identities=20% Similarity=0.165 Sum_probs=78.3
Q ss_pred ccccccHHHHHHHhCcHH--HHHHHHHhcCCCccc-CCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHH
Q 006569 533 LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHW 609 (640)
Q Consensus 533 ~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~-~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~ 609 (640)
.+.+-..|..|+.++++. +.|+ ..|++++. .+..+.||||+||..|+.++.++|+++|+.+...+.-|+||-..
T Consensus 42 D~sGMs~LahAaykGnl~~v~lll---~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqm 118 (396)
T KOG1710|consen 42 DPSGMSVLAHAAYKGNLTLVELLL---ELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQM 118 (396)
T ss_pred CCCcccHHHHHHhcCcHHHHHHHH---HhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHH
Confidence 355788999999999876 5553 35777776 77889999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHH
Q 006569 610 AAYYGRYESSSYHIY 624 (640)
Q Consensus 610 AA~~Gh~eiV~lLLs 624 (640)
||+-||.++|..+=.
T Consensus 119 AAFVG~H~CV~iINN 133 (396)
T KOG1710|consen 119 AAFVGHHECVAIINN 133 (396)
T ss_pred HHHhcchHHHHHHhc
Confidence 999999999987643
No 97
>PF13606 Ank_3: Ankyrin repeat
Probab=98.19 E-value=2e-06 Score=60.29 Aligned_cols=30 Identities=20% Similarity=0.229 Sum_probs=28.4
Q ss_pred CCCCHHHHHHHhCCHHHHHHHHHCCCCccc
Q 006569 569 HGQGVIHLCAMLGYTWAILLFSWSGLSLDF 598 (640)
Q Consensus 569 ~G~TpLHlAA~lG~~~iv~lLL~~Gadin~ 598 (640)
+|+||||+||..|+.+++++|+++|+|||.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999999984
No 98
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.19 E-value=1.2e-05 Score=88.03 Aligned_cols=98 Identities=17% Similarity=0.150 Sum_probs=78.2
Q ss_pred ccHHHHHHHhCcHHHHHHHHHhcCCCccc-CCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCC
Q 006569 537 KDSFFELTLKSKLKEWLLERVVEGSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR 615 (640)
Q Consensus 537 ~~~L~~a~l~~~L~~~Ll~kl~~g~~~~~-~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh 615 (640)
..+|+..+-.+.+..-| ..+..|+..+- --..|.||||+||+.|...-+++|+-.|+|+++.|.+|.||+.+|-..||
T Consensus 134 srQLhasvRt~nlet~L-Rll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH 212 (669)
T KOG0818|consen 134 SKQLHSSVRTGNLETCL-RLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGH 212 (669)
T ss_pred HHHHHHHhhcccHHHHH-HHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCc
Confidence 34556555556655322 12345666665 44679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhhhhhhcc
Q 006569 616 YESSSYHIYQISMQLVRLSL 635 (640)
Q Consensus 616 ~eiV~lLLs~GaD~l~r~gl 635 (640)
-++++.|+.---++..|...
T Consensus 213 ~~laeRl~e~~y~vtDR~~f 232 (669)
T KOG0818|consen 213 HELAERLVEIQYELTDRLAF 232 (669)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 99999999877777766544
No 99
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.16 E-value=4.9e-06 Score=91.95 Aligned_cols=64 Identities=22% Similarity=0.311 Sum_probs=58.7
Q ss_pred CcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHh
Q 006569 562 KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQ 625 (640)
Q Consensus 562 ~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~ 625 (640)
.+...|..|.||||+|+.+|+...++.|+.+|+++..+++.||+|||-|+..|+.+++..+|.+
T Consensus 47 ~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 47 VIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred eeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 3444888999999999999999999999999999999999999999999999999998877754
No 100
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.99 E-value=9.7e-06 Score=93.52 Aligned_cols=98 Identities=17% Similarity=0.131 Sum_probs=72.0
Q ss_pred ccccHHHHHHHhCc-----HHHHHHHHHhcCCCccc--CCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccc--------
Q 006569 535 EAKDSFFELTLKSK-----LKEWLLERVVEGSKTTE--YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR-------- 599 (640)
Q Consensus 535 ~~~~~L~~a~l~~~-----L~~~Ll~kl~~g~~~~~--~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~r-------- 599 (640)
.+++.|+.++++.. +..-|++.-.+=.+... -...|+||||+|...-+.++|++|+++||||++|
T Consensus 142 ~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~ 221 (782)
T KOG3676|consen 142 TGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCP 221 (782)
T ss_pred hhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCc
Confidence 47788888888432 22333321111111122 2347999999999999999999999999999865
Q ss_pred -cC--------------CCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 600 -DK--------------YGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 600 -D~--------------~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
|. .|..||-+||-.+.++++++|+.+|||.-.+
T Consensus 222 ~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aq 269 (782)
T KOG3676|consen 222 DDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQ 269 (782)
T ss_pred ccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCcc
Confidence 22 3678999999999999999999999986544
No 101
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=97.92 E-value=2.7e-05 Score=85.88 Aligned_cols=120 Identities=19% Similarity=0.091 Sum_probs=87.1
Q ss_pred ccHHHHHH----HhccCCCCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHH
Q 006569 517 NSWAYLFK----SVGDKRTSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFS 590 (640)
Q Consensus 517 ~~w~~ll~----~l~~~~~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL 590 (640)
+|-.+++. .+.|..-..+++.+.|+.|+.-.+.. +||+ ..|++++..|.+|+||||+||..++..+++.|+
T Consensus 560 eGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi---~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLV 636 (752)
T KOG0515|consen 560 EGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLI---EFGANVNAADSDGWTPLHCAASCNNVPMCKQLV 636 (752)
T ss_pred cchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHH---hcCCcccCccCCCCchhhhhhhcCchHHHHHHH
Confidence 44444444 34555556688999999999888754 8884 578888889999999999999999999999999
Q ss_pred HCCCCccc-ccCCCCcHHHHHH--HcCCHHHHHHHHH-hchhhhhhhcc-cccc
Q 006569 591 WSGLSLDF-RDKYGWTALHWAA--YYGRYESSSYHIY-QISMQLVRLSL-YALY 639 (640)
Q Consensus 591 ~~Gadin~-rD~~G~TpLH~AA--~~Gh~eiV~lLLs-~GaD~l~r~gl-~~~~ 639 (640)
..|+-|-+ .=.++.||.--+- ..|..+|.++|-. +-...+.-.|. ||||
T Consensus 637 e~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~vqesmG~mN~G~vYAlw 690 (752)
T KOG0515|consen 637 ESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGVQESMGSMNKGVVYALW 690 (752)
T ss_pred hccceEEeeecccccchhhhcchhhhhHHHHHHHHHHHHHhhcccccceeEEee
Confidence 99998865 3456778755433 2477888888842 11222333344 8876
No 102
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=97.90 E-value=2.9e-05 Score=60.93 Aligned_cols=52 Identities=19% Similarity=0.265 Sum_probs=38.5
Q ss_pred cccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHH
Q 006569 536 AKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFS 590 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL 590 (640)
++++|+.++..+++. +||++ .+.+.+.+|.+|.||||+||..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~---~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLE---HGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHH---TTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHH---CCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 468899999998876 77754 46666669999999999999999999999886
No 103
>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes. These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.
Probab=97.87 E-value=7.6e-05 Score=64.41 Aligned_cols=80 Identities=15% Similarity=0.066 Sum_probs=67.6
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCCCceeEEEEEeCCCCCc
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPI 444 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~pG~Vpl~Vt~~n~~~~ 444 (640)
+.|..++|.-|. -|+.|+|.|+.|.+. .-.++||+.+.+...|.+..+.|.+|.+.+|..++.|+..++. -
T Consensus 1 P~I~~i~P~~g~--pG~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~VP~~~~g~~~i~V~~~~G~-~ 71 (81)
T cd00604 1 PLIGSVGPVMGK--PGNTVTISGEGFGST------GGTVYFGGTAAEVLSWSDTSIVVEVPRVAPGNYNISVTTVDGV-T 71 (81)
T ss_pred CeEeeEcCCCCC--CCCEEEEEEECCCCC------ccEEEECCEEEEEEEECCCEEEEEeCCCCCCceEEEEEECCCc-c
Confidence 468899999887 678999999988762 2468999998888889999999999999999999999986653 4
Q ss_pred ccceeeeec
Q 006569 445 SQVLNFEYR 453 (640)
Q Consensus 445 Sev~~FEYr 453 (640)
|....|+|.
T Consensus 72 Sn~~~f~~l 80 (81)
T cd00604 72 SNGYNFEVL 80 (81)
T ss_pred cCcEeEEEc
Confidence 777779885
No 104
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=97.85 E-value=1.7e-05 Score=90.74 Aligned_cols=117 Identities=15% Similarity=0.128 Sum_probs=91.5
Q ss_pred hhhhcccccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHH
Q 006569 506 KKFASKSTCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAM 579 (640)
Q Consensus 506 ~~~~~k~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~ 579 (640)
..+....++.-++...+++++.+-+.. ...+..+|+.++-.+++. +.|+ ..+...+.....|.||||+||.
T Consensus 48 ~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll---~q~d~~na~~~e~~tplhlaaq 124 (854)
T KOG0507|consen 48 SGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLL---LQTDILNAVNIENETPLHLAAQ 124 (854)
T ss_pred cchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHH---hcccCCCcccccCcCccchhhh
Confidence 334444455557777787777555332 245677888888777765 4442 3444444477889999999999
Q ss_pred hCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHh
Q 006569 580 LGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQ 625 (640)
Q Consensus 580 lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~ 625 (640)
.|+.+++.+|+.+|+|.-.+|+.+.|+|-.||..|+.++|++|+++
T Consensus 125 hgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~ 170 (854)
T KOG0507|consen 125 HGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQK 170 (854)
T ss_pred hcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999988
No 105
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.73 E-value=6.7e-05 Score=86.77 Aligned_cols=90 Identities=16% Similarity=0.096 Sum_probs=74.5
Q ss_pred cccHHHHHHHhCcHH--HHHHHHHhcCCCccc--------CC---------------CCCCCHHHHHHHhCCHHHHHHHH
Q 006569 536 AKDSFFELTLKSKLK--EWLLERVVEGSKTTE--------YD---------------VHGQGVIHLCAMLGYTWAILLFS 590 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~--------~D---------------~~G~TpLHlAA~lG~~~iv~lLL 590 (640)
+.++|+.|+.+.+.. .+|+ ..|+++.. .+ ..|..||-+||-.+..+++++|+
T Consensus 184 GqSaLHiAIv~~~~~~V~lLl---~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl 260 (782)
T KOG3676|consen 184 GQSALHIAIVNRDAELVRLLL---AAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL 260 (782)
T ss_pred CcchHHHHHHhccHHHHHHHH---HcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence 778899998887755 5553 35555421 11 24678999999999999999999
Q ss_pred HCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchh
Q 006569 591 WSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISM 628 (640)
Q Consensus 591 ~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD 628 (640)
++|+|+|++|.+|+|.||.-+.+-..++-.++|++|++
T Consensus 261 ~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~ 298 (782)
T KOG3676|consen 261 AHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN 298 (782)
T ss_pred hcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999998
No 106
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.73 E-value=2.7e-05 Score=85.12 Aligned_cols=85 Identities=16% Similarity=0.161 Sum_probs=71.7
Q ss_pred cccHHHHHHHhCcHH---HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHH-CCCCcccccCCCCcHHHHHH
Q 006569 536 AKDSFFELTLKSKLK---EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~---~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~-~Gadin~rD~~G~TpLH~AA 611 (640)
..-.++.++..+++. .+++ .|.+...+|.+.+|+||.||+.|+.+++++|+. .+++++.+|..|+|||--|-
T Consensus 506 ~~i~~~~aa~~GD~~alrRf~l----~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~ 581 (622)
T KOG0506|consen 506 TVINVMYAAKNGDLSALRRFAL----QGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK 581 (622)
T ss_pred chhhhhhhhhcCCHHHHHHHHH----hcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence 445677777777765 3443 556666699999999999999999999998886 68999999999999999999
Q ss_pred HcCCHHHHHHHHH
Q 006569 612 YYGRYESSSYHIY 624 (640)
Q Consensus 612 ~~Gh~eiV~lLLs 624 (640)
..+|.+++++|-.
T Consensus 582 ~F~h~~v~k~L~~ 594 (622)
T KOG0506|consen 582 HFKHKEVVKLLEE 594 (622)
T ss_pred hcCcHHHHHHHHH
Confidence 9999999999864
No 107
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.71 E-value=1.9e-05 Score=86.15 Aligned_cols=70 Identities=24% Similarity=0.187 Sum_probs=62.7
Q ss_pred CCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhc------hhhhhhhcc
Q 006569 566 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQI------SMQLVRLSL 635 (640)
Q Consensus 566 ~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~G------aD~l~r~gl 635 (640)
++.++.-.+.+||+.|...+++-+.-.|.|++.+|.+.+|+||.||+.||+++|++||+.+ -|++.|+||
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPl 577 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPL 577 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcc
Confidence 3456778899999999999999888899999999999999999999999999999999988 366777766
No 108
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.69 E-value=5.2e-05 Score=80.99 Aligned_cols=57 Identities=12% Similarity=0.125 Sum_probs=54.4
Q ss_pred CCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhch
Q 006569 571 QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQIS 627 (640)
Q Consensus 571 ~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~Ga 627 (640)
..-|..||+.|..+.|+.|++.|++||.+|.....||.+|+.+||+.+|++||..||
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGA 93 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGA 93 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCC
Confidence 567899999999999999999999999999999999999999999999999999997
No 109
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.58 E-value=0.00012 Score=81.45 Aligned_cols=90 Identities=23% Similarity=0.182 Sum_probs=76.6
Q ss_pred cHHHHHHHhCcHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCC--cccccCCCCcHHHHHHHcCC
Q 006569 538 DSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS--LDFRDKYGWTALHWAAYYGR 615 (640)
Q Consensus 538 ~~L~~a~l~~~L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gad--in~rD~~G~TpLH~AA~~Gh 615 (640)
+.++++++.+++.+ |.+.-..|+..-.++.+..+.||+||..|+.++|++||++|-. ++..|..|.|+||-||..++
T Consensus 868 eeil~av~~~D~~k-lqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 868 EEILRAVLSSDLMK-LQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRN 946 (1004)
T ss_pred HHHHHHHHhccHHH-HHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc
Confidence 45788998888775 2232346666666888999999999999999999999999975 58899999999999999999
Q ss_pred HHHHHHHHHhchh
Q 006569 616 YESSSYHIYQISM 628 (640)
Q Consensus 616 ~eiV~lLLs~GaD 628 (640)
..+..+|+..||.
T Consensus 947 r~vc~~lvdagas 959 (1004)
T KOG0782|consen 947 RAVCQLLVDAGAS 959 (1004)
T ss_pred hHHHHHHHhcchh
Confidence 9999999999984
No 110
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.50 E-value=4.2e-05 Score=90.15 Aligned_cols=70 Identities=17% Similarity=0.086 Sum_probs=36.6
Q ss_pred hcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCccc-ccCCCCcHHHHHHHcCCHHHHHHHHHhch
Q 006569 558 VEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDF-RDKYGWTALHWAAYYGRYESSSYHIYQIS 627 (640)
Q Consensus 558 ~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~-rD~~G~TpLH~AA~~Gh~eiV~lLLs~Ga 627 (640)
.+|+++..+|+.|.+||.+||-.||..+|+.|+.+.++|++ .|+.+.|+|-+||..|+.++|.+||.+||
T Consensus 778 ~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~ga 848 (2131)
T KOG4369|consen 778 VRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGA 848 (2131)
T ss_pred HhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhc
Confidence 34444444555555555555555555555555555555543 34555555555555555555555555554
No 111
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=97.49 E-value=0.00025 Score=62.72 Aligned_cols=71 Identities=14% Similarity=0.135 Sum_probs=62.1
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALH 608 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH 608 (640)
.++++|+.|+--+.+. +||+ .-|+++..+|+.|.|||.-|.-.||..+|++|+.+|++-..+-.+|.+.+-
T Consensus 33 ggR~plhyAAD~GQl~ilefli---~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~e 105 (117)
T KOG4214|consen 33 GGRTPLHYAADYGQLSILEFLI---SIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIE 105 (117)
T ss_pred CCcccchHhhhcchHHHHHHHH---HhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHh
Confidence 5889999999888776 7885 457888889999999999999999999999999999999888888866543
No 112
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.38 E-value=9e-05 Score=87.46 Aligned_cols=120 Identities=13% Similarity=0.047 Sum_probs=64.5
Q ss_pred cccccccHHHHHHHhccCCCCc----cccccHHHHHHHhCcHH--HHHHHHHhcCCCccc-CCCCCCCHHHHHHHhCCHH
Q 006569 512 STCISNSWAYLFKSVGDKRTSL----PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTE-YDVHGQGVIHLCAMLGYTW 584 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~~~~----~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~-~D~~G~TpLHlAA~lG~~~ 584 (640)
+.+..+++.+++..+...+... -.+..+|+-++.-.+.. +-|+ ...+++.. .|+.+.|+|-+||..|..+
T Consensus 762 T~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~ll---k~ha~veaQsdrtkdt~lSlacsggr~~ 838 (2131)
T KOG4369|consen 762 TSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLL---KAHADVEAQSDRTKDTMLSLACSGGRTR 838 (2131)
T ss_pred cccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHH---hhhhhhhhhcccccCceEEEecCCCcch
Confidence 3344577877777664332221 12445555554444432 2221 12222222 5555666666666666666
Q ss_pred HHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhhhc
Q 006569 585 AILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVRLS 634 (640)
Q Consensus 585 iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r~g 634 (640)
+|++||.+|++-..|+-..+|||-.|+..|..++|++||++|+++.-|+|
T Consensus 839 vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtg 888 (2131)
T KOG4369|consen 839 VVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTG 888 (2131)
T ss_pred HHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccc
Confidence 66666666666666666666666666666666666666666655555444
No 113
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.19 E-value=0.00066 Score=67.04 Aligned_cols=65 Identities=17% Similarity=0.068 Sum_probs=61.3
Q ss_pred CCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCC-CCcccccCCCCcHHHHHHHcCCHHHHHHHHHh
Q 006569 561 SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG-LSLDFRDKYGWTALHWAAYYGRYESSSYHIYQ 625 (640)
Q Consensus 561 ~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~G-adin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~ 625 (640)
++++.+|..|+|+|.+||..|..+++.+|+.+| +.+.++|..|.+++.+|-..|+.++|++|-+.
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 466779999999999999999999999999999 89999999999999999999999999999865
No 114
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.63 E-value=0.00093 Score=79.28 Aligned_cols=66 Identities=20% Similarity=0.150 Sum_probs=55.9
Q ss_pred CCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhhh
Q 006569 568 VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVRL 633 (640)
Q Consensus 568 ~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r~ 633 (640)
..|.|+||.|+..|-.-++++|+.+|+++|.+|..|.||||.+...||...+..|+.+||+.....
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~ 719 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFD 719 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccC
Confidence 456888999998888888888999999999999999999999999999998888888888765443
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.37 E-value=0.0038 Score=39.83 Aligned_cols=28 Identities=29% Similarity=0.179 Sum_probs=24.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhchhh
Q 006569 602 YGWTALHWAAYYGRYESSSYHIYQISMQ 629 (640)
Q Consensus 602 ~G~TpLH~AA~~Gh~eiV~lLLs~GaD~ 629 (640)
+|+||||+|+..|+.+++++|+.+|.+.
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 4789999999999999999999888753
No 116
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=96.36 E-value=0.0042 Score=68.71 Aligned_cols=64 Identities=20% Similarity=0.073 Sum_probs=56.7
Q ss_pred CCCCCCC------HHHHHHHhCCHHHHHHHHHCCCCccccc-CCCCcHHHHHHHcCCHHHHHHHHHhchhh
Q 006569 566 YDVHGQG------VIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTALHWAAYYGRYESSSYHIYQISMQ 629 (640)
Q Consensus 566 ~D~~G~T------pLHlAA~lG~~~iv~lLL~~Gadin~rD-~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~ 629 (640)
+|.+|.| -||-+++-|+.++.--||.-|+++|+-+ ..|.||||.||..|..--|++|+..|||+
T Consensus 123 rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~ 193 (669)
T KOG0818|consen 123 RDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADP 193 (669)
T ss_pred CCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCC
Confidence 5555555 4899999999999988999999999866 57999999999999999999999999984
No 117
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=96.11 E-value=0.0049 Score=71.72 Aligned_cols=74 Identities=23% Similarity=0.311 Sum_probs=63.2
Q ss_pred cccHHHHHHHhCcH--HHHHHHHHhcCCCcccCCC-CCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHH
Q 006569 536 AKDSFFELTLKSKL--KEWLLERVVEGSKTTEYDV-HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (640)
Q Consensus 536 ~~~~L~~a~l~~~L--~~~Ll~kl~~g~~~~~~D~-~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~ 612 (640)
+++.|+-++..++. .+||++ .|.++..+|+ .|.||||.|...|+.+++-+||.+|+.+-.+|+.|..||..-++
T Consensus 52 GR~alH~~~S~~k~~~l~wLlq---hGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 52 GRTALHIAVSENKNSFLRWLLQ---HGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred ccceeeeeeccchhHHHHHHHh---cCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHHhh
Confidence 67777777666654 489964 5777777775 69999999999999999999999999999999999999998877
No 118
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.71 E-value=0.0086 Score=70.21 Aligned_cols=59 Identities=14% Similarity=-0.029 Sum_probs=44.2
Q ss_pred CCHHHHHHHhCCHHHHHHHHHCCCCc----------ccccCCCCcHHHHHHHcCCHHHHHHHHHhchhh
Q 006569 571 QGVIHLCAMLGYTWAILLFSWSGLSL----------DFRDKYGWTALHWAAYYGRYESSSYHIYQISMQ 629 (640)
Q Consensus 571 ~TpLHlAA~lG~~~iv~lLL~~Gadi----------n~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~ 629 (640)
.-+|.+|...|+.++|++++.+-... -..-..+-|||.+||..++.||+++||.+|++.
T Consensus 89 gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i 157 (822)
T KOG3609|consen 89 GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCI 157 (822)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCC
Confidence 45667777777777777777643222 133456689999999999999999999999864
No 119
>cd01178 IPT_NFAT IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.
Probab=95.70 E-value=0.031 Score=50.23 Aligned_cols=82 Identities=22% Similarity=0.199 Sum_probs=60.4
Q ss_pred cceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCc--------c----cceeeeeCCceeecCCC-CC--
Q 006569 364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV--------R----VPAEFVQAGVYRCFLPP-HS-- 428 (640)
Q Consensus 364 lfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdv--------e----Vpaeiiq~GVLrC~~Pp-h~-- 428 (640)
++.|...|-.-+...||-+|+++|..+.. .--+.|-+. | +..+.++..-|+|.+|| |.
T Consensus 1 lp~I~r~s~~s~sv~GG~Ev~Ll~~k~~k-------DikV~F~E~~~dG~~~WE~~a~f~~~~~hQ~aIvf~tPpY~~~~ 73 (101)
T cd01178 1 LPEIEKKSLNSCSVNGGEELFLTGKNFLK-------DSKVVFQEKGQDGEAQWEAEATIDKEKSHQNHLVVEVPPYHNKH 73 (101)
T ss_pred CCeeEEeccCceeecCCCEEEEEehhcCC-------CCEEEEEEeCCCCccceEEEEEeChHhceeeeEEEecCCCCCCC
Confidence 46799999999999999999999995422 123444321 1 12344567889999998 43
Q ss_pred ---CceeEEEEEeCCCCCcccceeeeec
Q 006569 429 ---PGLFLLYMSLDGHKPISQVLNFEYR 453 (640)
Q Consensus 429 ---pG~Vpl~Vt~~n~~~~Sev~~FEYr 453 (640)
|=.|-|++..+.+ ..|++..|+|.
T Consensus 74 I~~pV~V~~~l~~~~~-~~S~~~~FtY~ 100 (101)
T cd01178 74 VAAPVQVQFYVVNGKR-KRSQPQTFTYT 100 (101)
T ss_pred cCCceEEEEEEEcCCC-CcCCCCCcEec
Confidence 7888899876544 68999999996
No 120
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.65 E-value=0.0089 Score=66.84 Aligned_cols=61 Identities=21% Similarity=0.215 Sum_probs=50.4
Q ss_pred CHHHHHHHhCCHHHHH--HHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 572 GVIHLCAMLGYTWAIL--LFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 572 TpLHlAA~lG~~~iv~--lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
-|||+++......-+. ++...+..|+.+|..|.||||.|+.-||.+.++.|+.+|||.-++
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~k 84 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIK 84 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCcccc
Confidence 4599998877655544 334456788999999999999999999999999999999987654
No 121
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=95.60 E-value=0.012 Score=70.23 Aligned_cols=88 Identities=17% Similarity=0.059 Sum_probs=73.8
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~ 612 (640)
.+.+.|+.++...... ++|+ ..|++++.+|..|+||||.+...|+...+.+|+.+|++.++.|..|.+||++|..
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll---~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~ 731 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLL---QNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAME 731 (785)
T ss_pred cccchhhhhhccchHHHHHHHH---hcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhh
Confidence 3567778887776543 6664 4677777799999999999999999999999999999999999999999999988
Q ss_pred cCCHHHHHHHHHh
Q 006569 613 YGRYESSSYHIYQ 625 (640)
Q Consensus 613 ~Gh~eiV~lLLs~ 625 (640)
..+.+++-+|..-
T Consensus 732 ~~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 732 AANADIVLLLRLA 744 (785)
T ss_pred hccccHHHHHhhh
Confidence 8888877666544
No 122
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=95.54 E-value=0.15 Score=61.24 Aligned_cols=68 Identities=19% Similarity=0.068 Sum_probs=57.4
Q ss_pred CCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcc------cccCCCCcHHHHHHHcCCHHHHHHHHHhch
Q 006569 560 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD------FRDKYGWTALHWAAYYGRYESSSYHIYQIS 627 (640)
Q Consensus 560 g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin------~rD~~G~TpLH~AA~~Gh~eiV~lLLs~Ga 627 (640)
+.+++-+|..|+||||+|+..|+..++..|+.-|++.+ ..+-.|.|+--.|...||..+..+|-+++.
T Consensus 631 ~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L 704 (975)
T KOG0520|consen 631 GVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKAL 704 (975)
T ss_pred ccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHH
Confidence 34455599999999999999999999999998776543 455679999999999999999999988743
No 123
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=95.44 E-value=0.038 Score=66.98 Aligned_cols=88 Identities=17% Similarity=0.140 Sum_probs=74.6
Q ss_pred CccceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCc-ccceeeeeCCc-eeecCCCCCC-ceeEEEEEe
Q 006569 362 EHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-RVPAEFVQAGV-YRCFLPPHSP-GLFLLYMSL 438 (640)
Q Consensus 362 ~qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdv-eVpaeiiq~GV-LrC~~Pph~p-G~Vpl~Vt~ 438 (640)
-|.+.|..+.|.||+..|||.|+|+|+.+-. ++.-.|++|+. .-+....+++. ++|.+++-.+ +.-|+.|..
T Consensus 140 ~~~~~~~~~~P~~Gp~~ggt~v~~~Gs~l~~-----gs~~~~vv~~~~~c~~~~~~~~~~~~c~t~~~~~~~~~~~~v~f 214 (1025)
T KOG3610|consen 140 LQGPCFLSAEPVNGPASGGTQVHCTGSPLDT-----GSCPDCVVSGLGPCVISVVQDSAVIFCVTSSQGAGSEAPVLVSF 214 (1025)
T ss_pred ecceeEEeeccCcCCCCCCcceEEecccccc-----CCCceEEecCCccceeEeecCceEEEEecCCCCCCCccceEEEe
Confidence 5577999999999999999999999998865 46799999999 77777778886 9999998775 889999999
Q ss_pred CCCCCcccceeeeecC
Q 006569 439 DGHKPISQVLNFEYRS 454 (640)
Q Consensus 439 ~n~~~~Sev~~FEYr~ 454 (640)
++...-.....|+|..
T Consensus 215 ~~~~~~~~~~~f~y~~ 230 (1025)
T KOG3610|consen 215 DRTPQKLTPLAFNYTA 230 (1025)
T ss_pred cccccccCCCCccccc
Confidence 8875434468899987
No 124
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.39 E-value=0.028 Score=35.63 Aligned_cols=29 Identities=24% Similarity=0.309 Sum_probs=26.5
Q ss_pred CCCCHHHHHHHhCCHHHHHHHHHCCCCcc
Q 006569 569 HGQGVIHLCAMLGYTWAILLFSWSGLSLD 597 (640)
Q Consensus 569 ~G~TpLHlAA~lG~~~iv~lLL~~Gadin 597 (640)
.|.|+||+|+..|..++++.|+..|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 37899999999999999999999998775
No 125
>cd00602 IPT_TF IPT domain of eukaryotic transcription factors NF-kappaB/Rel, nuclear factor of activated Tcells (NFAT), and recombination signal J-kappa binding protein (RBP-Jkappa). The IPT domains in these proteins are involved in DNA binding. Most NF-kappaB/Rel proteins form homo- and heterodimers, while NFAT proteins are largely monomeric (with TonEBP being an exception). While the majority of sequence-specific DNA binding elements are found in the N-terminal domain, several are found in the IPT domain in loops adjacent to, and including, the linker region.
Probab=95.09 E-value=0.086 Score=47.54 Aligned_cols=82 Identities=20% Similarity=0.186 Sum_probs=64.3
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCC-------cccceeee----eCCceeecCCC-CC-----
Q 006569 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-------VRVPAEFV----QAGVYRCFLPP-HS----- 428 (640)
Q Consensus 366 sI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd-------veVpaeii----q~GVLrC~~Pp-h~----- 428 (640)
.|..+|-.-+...||-+|.++|..+.- ...-+.|++ .|+-|.+- +..-++|-+|| |.
T Consensus 2 ~I~r~s~~s~~~~GG~ev~Ll~~k~~k------~dikV~F~e~~~g~~~WE~~~~f~~~dv~q~aiv~~tP~y~~~~i~~ 75 (101)
T cd00602 2 PICRVSSLSGSVNGGDEVFLLCDKVNK------PDIKVWFGEKGPGETVWEAEAMFRQEDVRQVAIVFKTPPYHNKWITR 75 (101)
T ss_pred ceEEEeCCeeEcCCCcEEEEEecCCCC------CCCEEEEEecCCCCCeEEEEEEECHHHceEeEEEecCCCcCCCCccc
Confidence 578888899999999999999995432 247799999 55544443 55568888887 33
Q ss_pred CceeEEEEEeCCCCCcccceeeeec
Q 006569 429 PGLFLLYMSLDGHKPISQVLNFEYR 453 (640)
Q Consensus 429 pG~Vpl~Vt~~n~~~~Sev~~FEYr 453 (640)
|=.|+|++....+..+|+...|+|.
T Consensus 76 pV~V~i~L~r~~~~~~S~~~~FtY~ 100 (101)
T cd00602 76 PVQVPIQLVRPDDRKRSEPLTFTYT 100 (101)
T ss_pred cEEEEEEEEeCCCCeecCCcCeEEc
Confidence 7789999998867789999999996
No 126
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.40 E-value=0.11 Score=56.33 Aligned_cols=82 Identities=16% Similarity=0.193 Sum_probs=63.1
Q ss_pred ccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcC
Q 006569 537 KDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG 614 (640)
Q Consensus 537 ~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~G 614 (640)
-..|++++-.+++. .+|+ .-|.++|..|+....||.+|+..||..+|++|+++|+-. .||...----|++|.+.
T Consensus 37 f~elceacR~GD~d~v~~LV---etgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC-~rdtf~G~RC~YgaLnd 112 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLV---ETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAIC-SRDTFDGDRCHYGALND 112 (516)
T ss_pred hHHHHHHhhcccHHHHHHHH---HhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcc-cccccCcchhhhhhhhH
Confidence 34578888888776 6774 367777889999999999999999999999999999955 46655555668888876
Q ss_pred CHHHHHHHHH
Q 006569 615 RYESSSYHIY 624 (640)
Q Consensus 615 h~eiV~lLLs 624 (640)
+.. ++||+
T Consensus 113 ~IR--~mlls 120 (516)
T KOG0511|consen 113 RIR--RMLLS 120 (516)
T ss_pred HHH--HHHHH
Confidence 654 44543
No 127
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=93.88 E-value=0.099 Score=58.98 Aligned_cols=86 Identities=19% Similarity=0.163 Sum_probs=68.0
Q ss_pred ccHHHHHHHhC--cHHHHHHHHHhcCCC-c-ccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHH
Q 006569 537 KDSFFELTLKS--KLKEWLLERVVEGSK-T-TEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (640)
Q Consensus 537 ~~~L~~a~l~~--~L~~~Ll~kl~~g~~-~-~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~ 612 (640)
.+-|+.++..+ .+.+|++. .+-. . ...|+.|.|+||-||..++..++++|+++|+.+...|..|.||-.-|-.
T Consensus 900 ~sllh~a~~tg~~eivkyild---h~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqq 976 (1004)
T KOG0782|consen 900 CSLLHYAAKTGNGEIVKYILD---HGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQ 976 (1004)
T ss_pred hhHHHHHHhcCChHHHHHHHh---cCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHh
Confidence 34455555443 35577753 2211 1 1267899999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHh
Q 006569 613 YGRYESSSYHIYQ 625 (640)
Q Consensus 613 ~Gh~eiV~lLLs~ 625 (640)
.|..+.+.+|-+.
T Consensus 977 a~d~dlaayle~r 989 (1004)
T KOG0782|consen 977 AGDPDLAAYLESR 989 (1004)
T ss_pred cCCchHHHHHhhh
Confidence 9999999998653
No 128
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=93.42 E-value=0.09 Score=59.55 Aligned_cols=58 Identities=19% Similarity=0.082 Sum_probs=45.2
Q ss_pred HHHHHHhCCHHHHHHHHHCCCCc--c--cccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 574 IHLCAMLGYTWAILLFSWSGLSL--D--FRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 574 LHlAA~lG~~~iv~lLL~~Gadi--n--~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
|.-|........+-+||.+|... | +-+.+|+||||+||+.|+..+..+||=+|+|+..
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~ 689 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMA 689 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcccee
Confidence 33444555566677888988653 2 4678899999999999999999999999987554
No 129
>cd01176 IPT_RBP-Jkappa IPT domain of the recombination signal Jkappa binding protein (RBP-Jkappa). RBP-J kappa, was initially considered to be involved in V(D)J recombination because of its DNA binding specificity and structural similarity to site-specific recombinases known as the integrase family. Further studies indicated that RBP-J kappa functions as a repressor of transcription, via destabilization of the general transcription factor IID and recruitment of histone deacetylase complexes.
Probab=93.07 E-value=0.3 Score=42.96 Aligned_cols=66 Identities=17% Similarity=0.206 Sum_probs=53.1
Q ss_pred eEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCC-----------CceeEEEEEeCCCCCccccee
Q 006569 381 TKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS-----------PGLFLLYMSLDGHKPISQVLN 449 (640)
Q Consensus 381 tKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~-----------pG~Vpl~Vt~~n~~~~Sev~~ 449 (640)
.-+-++|..|.. ++.+.||++++-+..=.+-.|-|.+|+-+ |..||+.+...++..-+--..
T Consensus 20 amlEl~GenF~p-------nLkVWFG~veaeTmyR~~e~l~CvvPdis~f~~~w~~~~~p~~VPisLVR~DGvIY~T~lt 92 (97)
T cd01176 20 AMLELHGENFTP-------NLKVWFGDVEAETMYRCEESLLCVVPDISAFREEWRWVRQPVQVPISLVRNDGIIYPTGLT 92 (97)
T ss_pred EEEEEecCcCCC-------CceEEECCcceEEEEEccceeEEecCCHHHhccCceEecCceEeeEEEEecCCeEecCCce
Confidence 567789998866 68999999999887777888999999752 788999998888765566667
Q ss_pred eeec
Q 006569 450 FEYR 453 (640)
Q Consensus 450 FEYr 453 (640)
|+|.
T Consensus 93 FtYt 96 (97)
T cd01176 93 FTYT 96 (97)
T ss_pred EEec
Confidence 7775
No 130
>cd01177 IPT_NFkappaB IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to certain chemicals. NFkappaB blocking cell apoptosis in several cell types, gives it an important role in cell proliferation and differentiation.
Probab=92.30 E-value=0.58 Score=42.24 Aligned_cols=82 Identities=12% Similarity=0.079 Sum_probs=58.5
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCc-------cc-----ceeeeeCCceeecCCC-CC----
Q 006569 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-------RV-----PAEFVQAGVYRCFLPP-HS---- 428 (640)
Q Consensus 366 sI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdv-------eV-----paeiiq~GVLrC~~Pp-h~---- 428 (640)
.|..+|=.-|.+.||.+|.+++.-.. +-...+.|-+. |. |+.+...-.+++.+|| |.
T Consensus 2 ~I~r~s~~sgsv~GG~Ev~LLcdKV~------K~dI~VrF~e~~~~~~~We~~g~f~~~dVH~Q~AIvfkTPpY~~~~I~ 75 (102)
T cd01177 2 KICRLDKTSGSVKGGDEVYLLCDKVQ------KEDIQVRFFEEDEEETVWEAFGDFSQTDVHRQYAIVFRTPPYHDPDIT 75 (102)
T ss_pred EEEEecCcccccCCCcEEEEEecccC------CCCCEEEEEEcCCCCCceEEEeeECHHHcccceEEEEeCCCCCCCcCC
Confidence 68999999999999999999987442 11344555442 22 3334445568888998 44
Q ss_pred -CceeEEEEEeCCCCCcccceeeeec
Q 006569 429 -PGLFLLYMSLDGHKPISQVLNFEYR 453 (640)
Q Consensus 429 -pG~Vpl~Vt~~n~~~~Sev~~FEYr 453 (640)
|=.|-+++.......+|++..|+|.
T Consensus 76 ~pV~V~iqL~Rpsd~~~Sep~~F~Y~ 101 (102)
T cd01177 76 EPVKVKIQLKRPSDGERSESVPFTYV 101 (102)
T ss_pred CceEEEEEEEeCCCCCccCCcceEEc
Confidence 6677788877545579999999996
No 131
>PF08549 SWI-SNF_Ssr4: Fungal domain of unknown function (DUF1750); InterPro: IPR013859 This is a fungal protein of unknown function.
Probab=91.86 E-value=0.37 Score=55.89 Aligned_cols=101 Identities=26% Similarity=0.456 Sum_probs=66.5
Q ss_pred CChhHHHHHHhCCCc-------ceeccCCCCCCCCccEEE-ee--hhhhhhccccCccceecCCCCchhhhhhhcccCCE
Q 006569 33 LRPNEIHAILCNSKY-------FSINAKPVNLPKSGTVVL-FD--RKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNE 102 (640)
Q Consensus 33 l~~~ei~~il~~~~~-------~~~~~~~~~~p~~g~~~l-~~--r~~~~~fr~dg~~w~kkk~g~~~~e~h~~lkv~~~ 102 (640)
|..++|.++|..-.+ |..+. ..+|+-||||| |- -++.-.|-.|||.|.- -|.--+..|+|.
T Consensus 30 l~~~~~~~~Ll~ap~i~r~~~P~~Wty--lD~P~DGtv~L~wqp~~~lg~~fasDGy~wad-------~E~~y~~~~~G~ 100 (669)
T PF08549_consen 30 LPPETVVEYLLKAPQIARDTAPFFWTY--LDKPPDGTVLLTWQPLNRLGTNFASDGYVWAD-------PEQAYTHEVNGY 100 (669)
T ss_pred CCHHHHHHHHHhchhhhccCCCeEeec--ccCCCCCcEEEEecCchhcCCcCCCCcceecC-------hhheeeecCCCe
Confidence 455566666654332 22222 46799999987 42 2445779999999974 344455556665
Q ss_pred eeEEEEeee------cCCCCccceeeeecccCCC---------CceEEEeccccCC
Q 006569 103 ERIHVYYAH------GEDSPTFVRRCYWLLDKTL---------ENIVLVHYRETHE 143 (640)
Q Consensus 103 ~~~~~~y~~------~~~~~~f~rr~y~~~~~~~---------~~ivlvhy~~~~~ 143 (640)
. |-.||.. +|.....-||.|-|+-... +..+||||-.-..
T Consensus 101 ~-lEi~~~k~G~~p~~e~~a~h~RrRyRL~~~~~p~pn~P~~DpsLwiVHY~~a~~ 155 (669)
T PF08549_consen 101 T-LEIYEHKSGYHPPGEQYASHSRRRYRLVPGKVPNPNAPPPDPSLWIVHYGPAPP 155 (669)
T ss_pred E-EEEEEeecCcCCCCCchhheeeeeeEecCCCCCCCCCCCCCCcEEEEEecCCCc
Confidence 5 3333333 5788899999999995433 5689999987654
No 132
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=90.72 E-value=0.23 Score=55.62 Aligned_cols=46 Identities=22% Similarity=0.197 Sum_probs=41.8
Q ss_pred CCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 566 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 566 ~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
.+.--.|+||+||..|...+|..||..|+|+-.+|..|.||-..++
T Consensus 426 ~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 426 NDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred cccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 4444679999999999999999999999999999999999988877
No 133
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=87.07 E-value=0.88 Score=51.16 Aligned_cols=49 Identities=24% Similarity=0.130 Sum_probs=42.1
Q ss_pred HHHHHHHHHCCCCcccc------cCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 583 TWAILLFSWSGLSLDFR------DKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 583 ~~iv~lLL~~Gadin~r------D~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
...|+.|..++++.|++ |..--|+||+||..|..++|.+||..|+|.-.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~ 458 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPST 458 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchh
Confidence 66788999999988754 55678999999999999999999999998543
No 134
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=78.31 E-value=6.6 Score=46.99 Aligned_cols=83 Identities=14% Similarity=0.030 Sum_probs=58.8
Q ss_pred ccccccccHHHHHHHhccCCCCccccccHHHHHHHhCcHH--HHHHHHHhcCC-------Cccc-CCCCCCCHHHHHHHh
Q 006569 511 KSTCISNSWAYLFKSVGDKRTSLPEAKDSFFELTLKSKLK--EWLLERVVEGS-------KTTE-YDVHGQGVIHLCAML 580 (640)
Q Consensus 511 k~~a~~~~w~~ll~~l~~~~~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~-------~~~~-~D~~G~TpLHlAA~l 580 (640)
.+.+.+++..++...+++.+... .+.|+.++-++-.. +.++.. ..+. +.+. .=..+.|||.+||..
T Consensus 66 l~iai~nenle~~eLLl~~~~~~---gdALL~aI~~~~v~~VE~ll~~-~~~~~~~~~~~d~~~~~ft~ditPliLAAh~ 141 (822)
T KOG3609|consen 66 LHIAIDNENLELQELLLDTSSEE---GDALLLAIAVGSVPLVELLLVH-FVDAPYLERSGDANSPHFTPDITPLMLAAHL 141 (822)
T ss_pred eecccccccHHHHHHHhcCcccc---chHHHHHHHHHHHHHHHHHHhc-ccccchhccccccCcccCCCCccHHHHHHHh
Confidence 45566788899988888775433 78888888877544 555421 1111 1111 334678999999999
Q ss_pred CCHHHHHHHHHCCCCcc
Q 006569 581 GYTWAILLFSWSGLSLD 597 (640)
Q Consensus 581 G~~~iv~lLL~~Gadin 597 (640)
++.+++++|+.+|+.+-
T Consensus 142 NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 142 NNFEILQCLLTRGHCIP 158 (822)
T ss_pred cchHHHHHHHHcCCCCC
Confidence 99999999999999874
No 135
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=71.20 E-value=6 Score=39.51 Aligned_cols=46 Identities=22% Similarity=0.133 Sum_probs=41.9
Q ss_pred HHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHH
Q 006569 573 VIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIY 624 (640)
Q Consensus 573 pLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs 624 (640)
-|+.||..|+...+--.+..|.+++. ++|-.|+.++|..++.+++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 57899999999999999999999974 99999999999999998875
No 136
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=59.48 E-value=11 Score=46.56 Aligned_cols=76 Identities=21% Similarity=0.171 Sum_probs=52.5
Q ss_pred CCccceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCC--cccceeeeeCCceeecCCCCC--CceeEEEE
Q 006569 361 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE--VRVPAEFVQAGVYRCFLPPHS--PGLFLLYM 436 (640)
Q Consensus 361 q~qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd--veVpaeiiq~GVLrC~~Pph~--pG~Vpl~V 436 (640)
.-+.|+|++|+|.-++.+|||.|+|.|..+...-+...+.-.+ =|- ..|+++..-..-+.|..-++. ||.|.+.|
T Consensus 46 ~c~~P~i~~~~P~~g~~eggt~iti~g~nlg~~~~dv~~~v~V-a~v~c~~~~~~y~~~~~i~C~~~~~~~~~g~v~~~v 124 (1025)
T KOG3610|consen 46 VCPLPSITALSPLNGPIEGGTNISIVGTNLGNSLNDVSDGVKV-AGVRCSPVAEEYDCSPCIACSPGANGSWPGPINVAV 124 (1025)
T ss_pred ecCCCcccceeeccccccCCceeeeeeeehhhhhhhccCCceE-eeeecCCCccccccccceeeccCCCCCCCCceeEEe
Confidence 3567899999999999999999999999887632222111111 111 123444555566788888888 78888888
Q ss_pred E
Q 006569 437 S 437 (640)
Q Consensus 437 t 437 (640)
-
T Consensus 125 ~ 125 (1025)
T KOG3610|consen 125 G 125 (1025)
T ss_pred c
Confidence 7
No 137
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=57.72 E-value=17 Score=37.69 Aligned_cols=46 Identities=17% Similarity=0.086 Sum_probs=39.7
Q ss_pred CHHHHHHHHHCC-CCccc---ccCCCCcHHHHHHHcCCHHHHHHHHHhch
Q 006569 582 YTWAILLFSWSG-LSLDF---RDKYGWTALHWAAYYGRYESSSYHIYQIS 627 (640)
Q Consensus 582 ~~~iv~lLL~~G-adin~---rD~~G~TpLH~AA~~Gh~eiV~lLLs~Ga 627 (640)
...+++.++.+| +++|. +-+.|.|-|--|..++..+++.+||.+||
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 556778888888 57774 56889999999999999999999999998
No 138
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=49.87 E-value=30 Score=29.12 Aligned_cols=48 Identities=15% Similarity=0.057 Sum_probs=39.6
Q ss_pred CCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHh
Q 006569 571 QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQ 625 (640)
Q Consensus 571 ~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~ 625 (640)
...|..|...|+.++++.++..+ .++ ...|..|...-+-++++.|+.+
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 35689999999999999888655 332 4679999999999999999886
No 139
>PF14545 DBB: Dof, BCAP, and BANK (DBB) motif,
Probab=39.12 E-value=89 Score=30.08 Aligned_cols=76 Identities=16% Similarity=0.179 Sum_probs=55.7
Q ss_pred ecCCCccCCCCeEEEEECCCCCCccccC-CcceEEEeCC----c-ccceeeeeCCceeecCCCC---CCceeEEEEEeCC
Q 006569 370 VSPAWAFSNEKTKILVTGFFHKDCLHLS-KSNMFCVCGE----V-RVPAEFVQAGVYRCFLPPH---SPGLFLLYMSLDG 440 (640)
Q Consensus 370 ~SP~w~~~~ggtKVlI~G~f~~~~~~~~-~~~~~cmFGd----v-eVpaeiiq~GVLrC~~Pph---~pG~Vpl~Vt~~n 440 (640)
+-|+-=.++.. ||.|+=.- ++. +....+.|-- + .+++.++-+=|++.-+|.. .+|.|.+.|.|++
T Consensus 3 V~P~rI~cg~~-~vfIiL~~-----~l~~~~~~eVef~~~n~~~~~~~~~~~N~yt~~~~aPd~~~~pag~V~v~v~~~g 76 (142)
T PF14545_consen 3 VQPSRIRCGQP-EVFIILRD-----PLDEEDTVEVEFESNNKPIRRVPAKWENPYTLQFKAPDFCLEPAGSVNVRVYCDG 76 (142)
T ss_pred ecCceeecCCC-EEEEEEeC-----CCCCCCeEEEEEEeCCCeeEeccceEECCEEEEEECchhcCCCCceEEEEEEECC
Confidence 45777778888 88888332 222 3457776644 2 5889999999999999999 8999999999999
Q ss_pred CCCcccceeeeec
Q 006569 441 HKPISQVLNFEYR 453 (640)
Q Consensus 441 ~~~~Sev~~FEYr 453 (640)
-..|. +...|-
T Consensus 77 ~~~~~--~~ikyy 87 (142)
T PF14545_consen 77 VSLGT--RQIKYY 87 (142)
T ss_pred EEEEE--EeEEEE
Confidence 75443 444444
No 140
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=38.08 E-value=65 Score=32.70 Aligned_cols=67 Identities=9% Similarity=-0.021 Sum_probs=47.9
Q ss_pred cccHHHHHHHhCcH--HHHHHHHHhcCCCccc-CCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCc
Q 006569 536 AKDSFFELTLKSKL--KEWLLERVVEGSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWT 605 (640)
Q Consensus 536 ~~~~L~~a~l~~~L--~~~Ll~kl~~g~~~~~-~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~T 605 (640)
+.++++-++..... +.||+. .|..... .|..|.+++.+|-+.|+..+++.|-+.-.+-...++.-.+
T Consensus 12 gWTalmcaa~eg~~eavsyllg---rg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~nss~~ 81 (223)
T KOG2384|consen 12 GWTALMCAAMEGSNEAVSYLLG---RGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPMNSSRD 81 (223)
T ss_pred cchHHHHHhhhcchhHHHHHhc---cCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCcccCCCC
Confidence 56666666666543 478854 5644444 8999999999999999999999998875555544444333
No 141
>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif. The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.
Probab=37.60 E-value=14 Score=30.16 Aligned_cols=8 Identities=50% Similarity=1.248 Sum_probs=5.4
Q ss_pred ccCcccee
Q 006569 76 KDGHNWKK 83 (640)
Q Consensus 76 ~dg~~w~k 83 (640)
.|||.|||
T Consensus 2 ~Dgy~WRK 9 (60)
T PF03106_consen 2 DDGYRWRK 9 (60)
T ss_dssp -SSS-EEE
T ss_pred CCCCchhh
Confidence 49999986
No 142
>PF09099 Qn_am_d_aIII: Quinohemoprotein amine dehydrogenase, alpha subunit domain III; InterPro: IPR015183 This domain is predominantly found in the prokaryotic protein quinohemoprotein amine dehydrogenase, adopting an immunoglobulin-like beta-sandwich fold, with seven strands arranged into two beta sheets; the fold is possibly related to the immunoglobulin and/or fibronectin type III superfamilies. The precise function of this domain has not, as yet, been defined []. ; PDB: 1JMZ_A 1JMX_A 1PBY_A 1JJU_A.
Probab=32.65 E-value=1.1e+02 Score=26.76 Aligned_cols=64 Identities=23% Similarity=0.210 Sum_probs=38.5
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCC-cccceee-eeCC--ceeecCCCCC-CceeEEEEE
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-VRVPAEF-VQAG--VYRCFLPPHS-PGLFLLYMS 437 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd-veVpaei-iq~G--VLrC~~Pph~-pG~Vpl~Vt 437 (640)
+.|.-++|.---.+++++|+|.|+.|.. .+.||. ++|-.-. ..++ +++-.+..-. ||..++.+.
T Consensus 2 p~i~aV~P~~lkaG~~t~vti~Gt~L~~---------~v~l~~Gv~v~~v~~~s~~~v~v~V~~aa~a~~G~~~v~vg 70 (81)
T PF09099_consen 2 PTILAVSPAGLKAGEETTVTIVGTGLAG---------TVDLGPGVEVLKVVSASPDEVVVRVKAAADAAPGIRTVRVG 70 (81)
T ss_dssp SEEEEEESSEEETTCEEEEEEEEES-TT----------EE--TTEEEEEEEEE-STCEEEEEEEECTSSSEEEEEEET
T ss_pred CeEEEECchhccCCCeEEEEEEecCccc---------ceecCCCeEEEEEEEeCCCEEEEEEEEcCCCCCccEEEEec
Confidence 5789999999999999999999999944 256665 3443321 2222 2333444433 566666653
No 143
>smart00774 WRKY DNA binding domain. The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
Probab=30.14 E-value=20 Score=29.38 Aligned_cols=15 Identities=40% Similarity=0.820 Sum_probs=9.4
Q ss_pred ccCccceecCCCCchh
Q 006569 76 KDGHNWKKKKDGKTVK 91 (640)
Q Consensus 76 ~dg~~w~kkk~g~~~~ 91 (640)
.|||.|||= .-|.|+
T Consensus 2 ~DGy~WRKY-GQK~ik 16 (59)
T smart00774 2 DDGYQWRKY-GQKVIK 16 (59)
T ss_pred CCccccccc-CcEecC
Confidence 599999863 224444
No 144
>PF05587 Anth_Ig: Anthrax receptor extracellular domain; InterPro: IPR008400 Anthrax is an acute disease in humans and animals caused by the bacterium Bacillus anthracis, which can be lethal. There are effective vaccines against anthrax, and some forms of the disease respond well to antibiotic treatment. The anthrax bacillus is one of only a few that can form long-lived spores. The anthrax toxin consists of the proteins protective antigen (PA) lethal factor (LF) and oedema factor (EF). The first step of toxin entry into host cells is the recognition by PA of a receptor on the surface of the target cell. The subsequent cleavage of receptor-bound PA enables EF and LF to bind and form a heptameric PA63 pre-pore, which triggers endocytosis. PA has been shown to bind to two cellular receptors: anthrax toxin receptor/tumour endothelial marker 8 and capillary morphogenesis protein 2 (CMG2), which are closely related host cell receptors. Both bind to PA with high affinity and are capable of mediating toxicity [, ], and both are type 1 membrane proteins that include an approximately 200-aa extracellular von Willebrand factor A (VWA) domain with a metal ion-dependent adhesion site (MIDAS) motif []. This region is found in the putatively extracellular N-terminal half of the anthrax receptor. It is probably part of the Ig superfamily and most closely related to IPR002909 from INTERPRO.; GO: 0004872 receptor activity, 0016021 integral to membrane; PDB: 3N2N_E 1SHT_X 1TZN_o 1SHU_X.
Probab=28.63 E-value=19 Score=32.87 Aligned_cols=76 Identities=20% Similarity=0.296 Sum_probs=0.0
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEE--eCCc---ccceeeeeCCceeecCC-CCCCcee-EEEEE
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCV--CGEV---RVPAEFVQAGVYRCFLP-PHSPGLF-LLYMS 437 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cm--FGdv---eVpaeiiq~GVLrC~~P-ph~pG~V-pl~Vt 437 (640)
..|..+-|+--.+++.-.|.|.|..|..... ...-.|- |.+. ..-+..++++.|.|-+| -++||++ .++|+
T Consensus 6 ~Eil~~ePSsvC~ge~f~Vvv~G~GF~~~~~--~d~ViC~F~~n~t~~~~~KP~~v~dt~llCPaP~l~~~G~~~~v~VS 83 (105)
T PF05587_consen 6 IEILSVEPSSVCVGESFQVVVRGNGFNNARN--VDQVICRFKFNDTKTVDEKPVSVEDTYLLCPAPVLEEPGQTIFVEVS 83 (105)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeEEEEcCCceECCCceEEEEECccccccCC--CCeEEEEEEECCeeEEEeCCcEEcCCEEECCCccccCCCCEEEEEEE
Confidence 4688888999999999999999996655332 2245564 4543 22233889999999999 4779975 77888
Q ss_pred eCCCC
Q 006569 438 LDGHK 442 (640)
Q Consensus 438 ~~n~~ 442 (640)
..|+.
T Consensus 84 lNnG~ 88 (105)
T PF05587_consen 84 LNNGK 88 (105)
T ss_dssp -----
T ss_pred EcCCE
Confidence 77764
No 145
>KOG3743 consensus Recombination signal binding protein-J kappa(CBF1, Su(H), HS2NF5) [Transcription]
Probab=25.10 E-value=79 Score=36.46 Aligned_cols=70 Identities=14% Similarity=0.195 Sum_probs=48.1
Q ss_pred CCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCCCce-----------eEEEEEeCCCCCccc
Q 006569 378 NEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGL-----------FLLYMSLDGHKPISQ 446 (640)
Q Consensus 378 ~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~pG~-----------Vpl~Vt~~n~~~~Se 446 (640)
.+-+-+.+.|..|.. ...+.||++|+++..=..-+|.|.+|.-.+++ ||+-.+...+..-+-
T Consensus 505 gd~amlel~g~nf~p-------~l~vwfg~~e~et~~r~~~sl~c~Vp~vs~f~~~w~~~~~P~~~~islvr~dg~vy~~ 577 (622)
T KOG3743|consen 505 GDVAMLELHGQNFVP-------NLQVWFGDVEAETYYRSGESLQCVVPDVSAFRQEWLWTRGPTFVPISLVRTDGTVYAS 577 (622)
T ss_pred cceeEEEecCCCCCC-------CceeeccccCchhhhcccceEEEEeCChhhcccchhcccCceeeeeeheeccceEEec
Confidence 345677888998766 68899999999998777779999999866443 344444333332233
Q ss_pred ceeeeecC
Q 006569 447 VLNFEYRS 454 (640)
Q Consensus 447 v~~FEYr~ 454 (640)
-..|.|..
T Consensus 578 ~~~fty~p 585 (622)
T KOG3743|consen 578 GLTFTYTP 585 (622)
T ss_pred cceEEecc
Confidence 45677764
No 146
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=23.18 E-value=20 Score=41.64 Aligned_cols=56 Identities=16% Similarity=0.150 Sum_probs=40.0
Q ss_pred HHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 577 CAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 577 AA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
|+..+....+-.|+.+|+..+.+|..|.||+|+++..|..++++.++..-.+..++
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~ 458 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLK 458 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcc
Confidence 45555555666777778888888888888888888888888887777655444433
No 147
>COG3514 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.85 E-value=32 Score=30.67 Aligned_cols=23 Identities=26% Similarity=0.719 Sum_probs=19.7
Q ss_pred EEeehhhhhhccccCccceecCC
Q 006569 64 VLFDRKMLRNFRKDGHNWKKKKD 86 (640)
Q Consensus 64 ~l~~r~~~~~fr~dg~~w~kkk~ 86 (640)
+=.|..||.+||.+|--|+.|=|
T Consensus 60 lRiDaDVle~fra~GkGwQtRiN 82 (93)
T COG3514 60 LRIDADVLEKFRAGGKGWQTRIN 82 (93)
T ss_pred eEecHHHHHHHHcCCccHHHHHH
Confidence 34699999999999999998743
No 148
>PF01913 FTR: Formylmethanofuran-tetrahydromethanopterin formyltransferase; InterPro: IPR022667 Formylmethanofuran:tetrahyromethanopterin formyltransferase (Ftr) is involved in C1 metabolism in methanogenic archaea, sulphate-reducing archaea and methylotrophic bacteria. It catalyses the following reversible reaction: N-formylmethanofuran + 5,6,7,8-tetrahydromethanopterin = methanofuran + 5-formyl-5,6,7,8-tetrahydromethanopterin Ftr from the thermophilic methanogen Methanopyrus kandleri (optimum growth temperature 98 degrees C) is a hyperthermophilic enzyme that is absolutely dependent on the presence of lyotropic salts for activity and thermostability. The crystal structure of Ftr, determined to a reveals a homotetramer composed essentially of two dimers. Each subunit is subdivided into two tightly associated lobes both consisting of a predominantly antiparallel beta sheet flanked by alpha helices forming an alpha/beta sandwich structure. The approximate location of the active site was detected in a region close to the dimer interface []. Ftr from the mesophilic methanogen Methanosarcina barkeri and the sulphate-reducing archaeon Archaeoglobus fulgidus have a similar structure []. In the methylotrophic bacterium Methylobacterium extorquens, Ftr interacts with three other polypeptides to form an Ftr/cyclohydrolase complex which catalyses the hydrolysis of formyl-tetrahydromethanopterin to formate during growth on C1 substrates [].; GO: 0016740 transferase activity, 0006730 one-carbon metabolic process; PDB: 1M5H_E 1M5S_C 1FTR_C 2FHJ_B 2FHK_D.
Probab=20.45 E-value=42 Score=32.27 Aligned_cols=20 Identities=40% Similarity=0.549 Sum_probs=14.6
Q ss_pred hhhhhccccCccceecCCCCc
Q 006569 69 KMLRNFRKDGHNWKKKKDGKT 89 (640)
Q Consensus 69 ~~~~~fr~dg~~w~kkk~g~~ 89 (640)
+.|||| =|||.|.|+-+||.
T Consensus 119 ~~lr~F-GDG~q~sk~~~grr 138 (144)
T PF01913_consen 119 KKLRFF-GDGYQISKEIGGRR 138 (144)
T ss_dssp HHHHGG-GTT--EEEEETTEE
T ss_pred ccccCc-cCCceEEEEECCEE
Confidence 467886 69999999999964
Done!