Query 006569
Match_columns 640
No_of_seqs 357 out of 1680
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 03:05:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006569.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006569hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cxk_A Camta1, calmodulin bind 99.9 2.8E-27 9.5E-32 207.6 8.8 86 363-454 5-90 (95)
2 1n0q_A 3ANK, 3 ankyrin repeats 99.7 4E-16 1.4E-20 132.3 11.3 90 536-628 2-93 (93)
3 4gpm_A Engineered protein OR26 99.7 5.3E-16 1.8E-20 148.1 12.5 113 514-629 44-162 (169)
4 4gpm_A Engineered protein OR26 99.6 7.5E-16 2.5E-20 147.0 12.2 118 512-632 9-132 (169)
5 3aaa_C Myotrophin, protein V-1 99.6 1.1E-14 3.8E-19 129.2 10.3 95 535-632 6-102 (123)
6 3twr_A Tankyrase-2; ankyrin re 99.5 3.6E-14 1.2E-18 131.6 11.7 118 512-632 13-137 (165)
7 1d9s_A Cyclin-dependent kinase 99.5 2E-14 6.7E-19 130.1 8.8 109 516-628 21-136 (136)
8 3c5r_A BARD-1, BRCA1-associate 99.5 4.2E-14 1.4E-18 127.6 10.7 97 533-632 7-105 (137)
9 2jab_A H10-2-G3; HER2, darpin, 99.5 4.1E-14 1.4E-18 127.9 10.6 111 513-626 20-136 (136)
10 1awc_B Protein (GA binding pro 99.5 4.2E-14 1.4E-18 130.0 10.7 114 516-632 11-129 (153)
11 1n0r_A 4ANK, 4 ankyrin repeats 99.5 1.3E-13 4.6E-18 120.6 13.3 92 534-628 33-126 (126)
12 2jab_A H10-2-G3; HER2, darpin, 99.5 7.9E-14 2.7E-18 126.0 12.0 95 534-631 12-108 (136)
13 3f6q_A Integrin-linked protein 99.5 5.8E-14 2E-18 132.4 11.2 115 514-631 12-133 (179)
14 3v30_A DNA-binding protein rfx 99.5 6.8E-14 2.3E-18 130.6 11.2 116 514-632 43-164 (172)
15 2l6b_A NR1C; ankyrin, consensu 99.5 2.3E-14 7.9E-19 125.5 7.6 97 534-633 7-105 (115)
16 2y1l_E Darpin-8.4; hydrolase-i 99.5 9E-14 3.1E-18 130.1 11.6 113 516-631 23-141 (169)
17 1dcq_A PYK2-associated protein 99.5 8.3E-14 2.9E-18 142.8 12.2 93 534-629 167-264 (278)
18 1ihb_A P18-INK4C(INK6), cyclin 99.5 1.5E-13 5.2E-18 126.5 12.7 111 514-628 45-162 (162)
19 1ycs_B 53BP2, P53BP2; ankyrin 99.5 4.7E-14 1.6E-18 140.0 9.7 92 536-630 70-166 (239)
20 1oy3_D Transcription factor in 99.5 1E-13 3.5E-18 138.1 12.2 96 534-632 156-254 (282)
21 3v31_A Ankyrin repeat family A 99.5 1.2E-13 4E-18 128.4 11.3 112 516-630 45-162 (167)
22 1d9s_A Cyclin-dependent kinase 99.5 3.5E-14 1.2E-18 128.4 7.1 94 534-631 10-106 (136)
23 1bi7_B P16INK4A, MTS1, multipl 99.5 3.4E-14 1.1E-18 131.5 6.7 115 514-632 19-140 (156)
24 4b93_B Ankyrin repeat domain-c 99.5 1.4E-13 4.7E-18 140.2 11.2 115 514-631 93-213 (269)
25 1ihb_A P18-INK4C(INK6), cyclin 99.5 1.3E-13 4.6E-18 126.9 9.9 112 514-629 12-129 (162)
26 2rfm_A Putative ankyrin repeat 99.5 3.5E-13 1.2E-17 128.2 12.9 94 534-630 66-161 (192)
27 3deo_A Signal recognition part 99.5 1.5E-13 5.3E-18 130.6 10.0 93 535-631 43-138 (183)
28 3v30_A DNA-binding protein rfx 99.5 5.5E-13 1.9E-17 124.4 13.4 114 516-632 11-131 (172)
29 3lvq_E ARF-GAP with SH3 domain 99.4 1.6E-13 5.5E-18 151.6 11.0 121 514-638 139-274 (497)
30 1bd8_A P19INK4D CDK4/6 inhibit 99.4 1.9E-13 6.4E-18 125.4 9.6 90 535-629 35-126 (156)
31 3ehr_A Osteoclast-stimulating 99.4 1.8E-13 6.2E-18 133.4 10.0 93 535-630 72-167 (222)
32 4g8k_A 2-5A-dependent ribonucl 99.4 2.4E-13 8.2E-18 140.7 11.2 119 514-635 175-305 (337)
33 1n0r_A 4ANK, 4 ankyrin repeats 99.4 4.2E-13 1.5E-17 117.4 11.0 93 536-631 2-96 (126)
34 2vge_A RELA-associated inhibit 99.4 3.1E-13 1.1E-17 134.2 11.1 119 511-632 25-152 (229)
35 2b0o_E UPLC1; arfgap, structur 99.4 4.2E-13 1.4E-17 139.3 12.5 99 534-636 188-291 (301)
36 2pnn_A Transient receptor pote 99.4 1.9E-13 6.4E-18 137.3 8.9 123 511-633 105-264 (273)
37 2dzn_A Probable 26S proteasome 99.4 4.7E-13 1.6E-17 129.6 11.5 117 513-632 78-204 (228)
38 2y1l_E Darpin-8.4; hydrolase-i 99.4 6.5E-13 2.2E-17 124.2 12.0 112 512-626 52-169 (169)
39 2zgd_A 3 repeat synthetic anky 99.4 5.7E-13 1.9E-17 116.8 10.9 86 534-622 22-109 (110)
40 2f8y_A Notch homolog 1, transl 99.4 7E-13 2.4E-17 128.2 12.3 91 536-629 92-184 (223)
41 1yyh_A HN1;, notch 1, ankyrin 99.4 4E-13 1.4E-17 133.8 10.5 116 513-631 96-218 (253)
42 2rfa_A Transient receptor pote 99.4 6.8E-13 2.3E-17 129.3 12.0 120 512-634 80-228 (232)
43 3aji_A 26S proteasome non-ATPa 99.4 6.7E-13 2.3E-17 129.0 11.5 116 514-632 80-201 (231)
44 1k1a_A B-cell lymphoma 3-encod 99.4 9.3E-13 3.2E-17 128.3 12.5 116 514-632 86-212 (241)
45 3ui2_A Signal recognition part 99.4 2.9E-13 9.9E-18 135.2 9.1 93 535-631 44-139 (244)
46 3jxi_A Vanilloid receptor-rela 99.4 4.2E-13 1.4E-17 133.3 9.9 120 512-631 98-253 (260)
47 1bi7_B P16INK4A, MTS1, multipl 99.4 2.1E-13 7.1E-18 126.1 6.7 94 534-631 10-106 (156)
48 3v31_A Ankyrin repeat family A 99.4 1.8E-12 6.1E-17 120.4 13.1 114 516-632 12-131 (167)
49 2etb_A Transient receptor pote 99.4 4.3E-13 1.5E-17 133.1 9.4 122 511-632 94-250 (256)
50 1ikn_D Protein (I-kappa-B-alph 99.4 2.5E-13 8.5E-18 133.2 7.1 116 512-630 83-211 (236)
51 3jxi_A Vanilloid receptor-rela 99.4 1E-12 3.5E-17 130.5 11.6 92 535-629 92-211 (260)
52 3hra_A Ankyrin repeat family p 99.4 1.2E-12 4.3E-17 124.4 11.7 109 515-626 80-201 (201)
53 1wdy_A 2-5A-dependent ribonucl 99.4 7.2E-13 2.5E-17 131.3 10.3 116 514-632 155-282 (285)
54 2pnn_A Transient receptor pote 99.4 6.1E-13 2.1E-17 133.6 9.8 93 535-630 100-220 (273)
55 2f8y_A Notch homolog 1, transl 99.4 1.6E-12 5.5E-17 125.6 12.2 119 511-632 29-154 (223)
56 3f6q_A Integrin-linked protein 99.4 8.9E-13 3.1E-17 124.2 10.0 94 535-631 4-100 (179)
57 2etb_A Transient receptor pote 99.4 2E-12 6.8E-17 128.3 13.0 93 534-629 88-207 (256)
58 1n0q_A 3ANK, 3 ankyrin repeats 99.4 4.8E-13 1.6E-17 113.2 7.2 63 569-631 1-63 (93)
59 2rfm_A Putative ankyrin repeat 99.4 3.1E-12 1.1E-16 121.7 13.7 111 513-626 74-190 (192)
60 3twr_A Tankyrase-2; ankyrin re 99.4 5.1E-13 1.7E-17 123.8 7.9 113 511-627 46-164 (165)
61 3b7b_A Euchromatic histone-lys 99.4 1.8E-12 6.3E-17 126.4 11.8 117 513-632 83-206 (237)
62 2rfa_A Transient receptor pote 99.4 1.8E-12 6.1E-17 126.3 11.7 115 514-631 10-149 (232)
63 3utm_A Tankyrase-1; tankyrase, 99.4 1.4E-12 4.7E-17 133.5 11.0 96 534-632 209-309 (351)
64 3t8k_A Uncharacterized protein 99.4 1.5E-13 5.1E-18 132.9 3.5 90 535-627 74-178 (186)
65 3utm_A Tankyrase-1; tankyrase, 99.4 2.3E-12 7.8E-17 131.9 12.6 117 512-631 29-152 (351)
66 1yyh_A HN1;, notch 1, ankyrin 99.4 9.9E-13 3.4E-17 131.0 9.5 117 512-631 62-185 (253)
67 1awc_B Protein (GA binding pro 99.4 3.1E-12 1E-16 117.5 12.1 108 512-622 39-152 (153)
68 4hbd_A KN motif and ankyrin re 99.4 5.4E-13 1.8E-17 135.7 7.6 115 514-631 118-245 (276)
69 2dzn_A Probable 26S proteasome 99.4 9.1E-13 3.1E-17 127.6 8.6 115 512-629 41-167 (228)
70 1n11_A Ankyrin; clathrin, BAND 99.4 1.6E-12 5.5E-17 139.0 11.3 116 513-631 251-372 (437)
71 3ljn_A Hypothetical protein; a 99.4 2.3E-12 8E-17 134.6 12.3 117 513-632 144-273 (364)
72 4hbd_A KN motif and ankyrin re 99.4 3.4E-12 1.2E-16 129.8 13.1 90 534-626 181-273 (276)
73 1s70_B 130 kDa myosin-binding 99.4 1.5E-12 5.2E-17 131.5 10.4 93 535-630 39-133 (299)
74 3hra_A Ankyrin repeat family p 99.4 1.9E-12 6.5E-17 123.1 10.5 120 511-632 43-174 (201)
75 1bd8_A P19INK4D CDK4/6 inhibit 99.4 3.9E-12 1.3E-16 116.5 12.2 107 515-625 43-155 (156)
76 1ikn_D Protein (I-kappa-B-alph 99.4 1.7E-12 5.8E-17 127.3 10.3 116 514-632 52-180 (236)
77 2xai_A ASB-9, ankyrin repeat a 99.4 2.3E-12 8E-17 129.0 11.3 115 514-632 10-130 (261)
78 2xai_A ASB-9, ankyrin repeat a 99.4 1.9E-12 6.3E-17 129.8 10.4 115 513-631 75-194 (261)
79 2vge_A RELA-associated inhibit 99.4 1.4E-12 4.6E-17 129.6 9.3 95 535-632 20-116 (229)
80 1wdy_A 2-5A-dependent ribonucl 99.3 3.2E-12 1.1E-16 126.6 11.9 116 514-632 12-134 (285)
81 3kea_A K1L; tropism, ANK repea 99.3 8.3E-13 2.8E-17 134.8 7.7 113 514-629 38-155 (285)
82 1ycs_B 53BP2, P53BP2; ankyrin 99.3 1.5E-12 5.2E-17 129.1 9.3 95 535-632 36-132 (239)
83 1s70_B 130 kDa myosin-binding 99.3 2.9E-12 9.9E-17 129.4 11.5 66 566-631 195-260 (299)
84 3kea_A K1L; tropism, ANK repea 99.3 3.2E-12 1.1E-16 130.4 11.8 107 520-631 13-123 (285)
85 1oy3_D Transcription factor in 99.3 1.2E-12 4.2E-17 130.2 8.0 118 512-632 50-221 (282)
86 3ljn_A Hypothetical protein; a 99.3 1.4E-12 4.7E-17 136.4 8.3 95 535-632 137-240 (364)
87 2fo1_E LIN-12 protein; beta-ba 99.3 3.6E-12 1.2E-16 134.9 11.5 109 519-629 250-372 (373)
88 4b93_B Ankyrin repeat domain-c 99.3 2.3E-12 7.9E-17 131.2 9.2 97 532-631 82-180 (269)
89 3d9h_A CDNA FLJ77766, highly s 99.3 4.7E-12 1.6E-16 129.0 11.0 115 513-631 131-250 (285)
90 3ui2_A Signal recognition part 99.3 5E-12 1.7E-16 126.3 10.3 113 513-628 51-185 (244)
91 1k1a_A B-cell lymphoma 3-encod 99.3 8.6E-12 2.9E-16 121.5 11.5 118 512-632 14-145 (241)
92 1dcq_A PYK2-associated protein 99.3 5.3E-12 1.8E-16 129.4 10.4 97 535-632 129-234 (278)
93 1sw6_A Regulatory protein SWI6 99.3 2.6E-12 8.9E-17 133.8 8.2 121 510-632 134-312 (327)
94 4g8k_A 2-5A-dependent ribonucl 99.3 6.3E-12 2.2E-16 130.0 10.6 110 517-633 216-331 (337)
95 3ehr_A Osteoclast-stimulating 99.3 2.5E-12 8.5E-17 125.3 7.1 115 516-633 82-203 (222)
96 3aji_A 26S proteasome non-ATPa 99.3 1.4E-11 5E-16 119.5 12.2 115 514-631 47-167 (231)
97 3b7b_A Euchromatic histone-lys 99.3 1.2E-11 4.3E-16 120.5 11.8 117 512-631 49-172 (237)
98 3d9h_A CDNA FLJ77766, highly s 99.3 1E-11 3.6E-16 126.4 11.4 117 511-631 63-185 (285)
99 3lvq_E ARF-GAP with SH3 domain 99.3 6.1E-12 2.1E-16 138.9 8.7 92 537-631 133-235 (497)
100 3deo_A Signal recognition part 99.3 1.6E-11 5.4E-16 116.6 10.4 107 518-627 55-167 (183)
101 2fo1_E LIN-12 protein; beta-ba 99.3 1.1E-11 3.7E-16 131.3 10.2 119 511-632 203-342 (373)
102 1n11_A Ankyrin; clathrin, BAND 99.3 1.4E-11 4.7E-16 131.8 10.8 117 511-630 18-140 (437)
103 3jue_A Arfgap with coiled-coil 99.2 2.8E-11 9.6E-16 129.7 13.1 92 534-628 233-326 (368)
104 2b0o_E UPLC1; arfgap, structur 99.2 9.7E-12 3.3E-16 129.0 9.2 93 536-631 151-254 (301)
105 3c5r_A BARD-1, BRCA1-associate 99.2 1E-11 3.6E-16 111.8 8.0 66 565-630 5-70 (137)
106 2zgd_A 3 repeat synthetic anky 99.2 5.6E-12 1.9E-16 110.4 5.6 67 565-631 19-85 (110)
107 3eu9_A Huntingtin-interacting 99.2 3.6E-11 1.2E-15 116.3 11.2 60 569-628 75-134 (240)
108 3jue_A Arfgap with coiled-coil 99.2 1.9E-11 6.4E-16 131.1 9.8 93 536-631 199-296 (368)
109 3aaa_C Myotrophin, protein V-1 99.2 1.9E-11 6.4E-16 108.2 7.7 99 516-617 16-120 (123)
110 3t8k_A Uncharacterized protein 99.2 1.3E-11 4.5E-16 119.2 7.1 94 535-631 37-149 (186)
111 2l6b_A NR1C; ankyrin, consensu 99.2 7.4E-12 2.5E-16 109.4 4.3 66 566-631 5-70 (115)
112 3eu9_A Huntingtin-interacting 99.2 8.5E-11 2.9E-15 113.6 11.1 208 401-629 15-236 (240)
113 1sw6_A Regulatory protein SWI6 99.1 6.7E-11 2.3E-15 123.1 9.3 113 516-631 106-233 (327)
114 2aja_A Ankyrin repeat family p 99.1 2E-11 6.9E-16 131.1 1.1 118 512-635 97-229 (376)
115 2aja_A Ankyrin repeat family p 98.9 3.2E-10 1.1E-14 121.8 2.9 91 536-630 92-190 (376)
116 3muj_A Transcription factor CO 98.9 3.5E-09 1.2E-13 97.1 8.2 84 364-454 5-90 (138)
117 3mlp_A Transcription factor CO 98.6 1.7E-07 5.8E-12 97.3 9.7 84 364-454 231-316 (402)
118 1uad_C RSEC5, exocyst complex 98.1 9.3E-06 3.2E-10 71.3 8.0 84 364-455 7-95 (99)
119 3tc9_A Hypothetical hydrolase; 97.9 2.6E-05 8.8E-10 84.6 8.8 88 361-455 14-106 (430)
120 3kya_A Putative phosphatase; s 97.7 4.7E-05 1.6E-09 84.7 7.1 88 361-455 14-104 (496)
121 3hrp_A Uncharacterized protein 97.6 8.5E-05 2.9E-09 79.8 7.7 88 361-455 14-105 (409)
122 2uzx_B Hepatocyte growth facto 97.4 9.3E-05 3.2E-09 85.9 5.9 95 363-457 540-638 (727)
123 4hw6_A Hypothetical protein, I 97.3 0.00035 1.2E-08 75.9 8.4 89 361-455 16-108 (433)
124 2uzx_B Hepatocyte growth facto 97.2 4.9E-05 1.7E-09 88.2 0.0 74 364-442 635-709 (727)
125 2yrp_A Nuclear factor of activ 96.8 0.0038 1.3E-07 56.0 8.5 86 361-454 5-108 (114)
126 1ikn_C P50D, protein (NF-kappa 94.8 0.087 3E-06 47.5 8.2 89 365-455 4-106 (119)
127 1u36_A DNA-binding, nuclear fa 93.9 0.17 5.8E-06 44.8 7.8 83 365-454 4-105 (106)
128 1my7_A NF-kappab P65 (RELA) su 93.0 0.24 8.1E-06 44.4 7.3 88 365-454 4-100 (114)
129 1zk9_A Transcription factor RE 92.5 0.087 3E-06 46.9 3.8 89 364-454 12-109 (110)
130 1oy3_C Transcription factor P6 91.3 0.47 1.6E-05 43.6 7.3 88 365-454 4-100 (136)
131 2v2t_A RELB, transcription fac 88.9 0.8 2.7E-05 47.2 7.5 86 363-454 189-287 (288)
132 1a3q_A Protein (nuclear factor 88.7 1.2 4E-05 46.0 8.5 88 364-453 185-284 (285)
133 1nfk_A Protein (nuclear factor 88.4 1.2 4.2E-05 46.6 8.6 85 364-455 209-312 (325)
134 3iag_C Recombining binding pro 87.9 0.91 3.1E-05 48.6 7.3 67 381-454 343-420 (422)
135 2o61_A Transcription factor P6 86.8 1.1 3.6E-05 50.1 7.3 86 364-455 176-274 (540)
136 1svc_P Protein (nuclear factor 86.8 1.4 4.7E-05 46.8 7.9 86 364-455 249-352 (365)
137 3orj_A Sugar-binding protein; 86.4 1 3.4E-05 48.6 6.6 78 363-454 112-196 (439)
138 1ikn_A P65, protein (NF-kappa- 86.3 1.6 5.4E-05 45.0 7.9 90 364-455 175-273 (286)
139 1p7h_L Nuclear factor of activ 85.6 1.6 5.3E-05 45.0 7.4 86 363-454 184-285 (286)
140 1gji_A C-REL protein, C-REL pr 82.1 2.3 7.7E-05 43.6 6.8 90 363-454 177-274 (275)
141 1imh_C NF-AT5, tonebp, nuclear 77.7 4.9 0.00017 41.2 7.6 88 363-454 180-280 (281)
142 3oky_A Plexin-A2; transmembran 66.0 13 0.00045 42.6 8.5 86 362-454 526-624 (681)
143 2d9z_A Protein kinase C, NU ty 64.3 4.3 0.00015 36.9 3.2 29 107-137 12-40 (129)
144 3brd_A LIN-12 and GLP-1 phenot 39.2 47 0.0016 36.2 6.7 83 364-454 375-474 (477)
145 3orj_A Sugar-binding protein; 35.5 41 0.0014 36.3 5.5 69 376-454 34-111 (439)
146 2ayd_A WRKY transcription fact 33.6 12 0.0004 31.0 0.8 9 75-83 14-22 (76)
147 1wj2_A Probable WRKY transcrip 32.4 12 0.0004 31.2 0.5 10 75-84 17-26 (78)
148 2coa_A Protein kinase C, D2 ty 30.0 40 0.0014 30.4 3.7 30 106-137 11-40 (125)
No 1
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=99.94 E-value=2.8e-27 Score=207.61 Aligned_cols=86 Identities=35% Similarity=0.722 Sum_probs=81.3
Q ss_pred ccceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCCCceeEEEEEeCCCC
Q 006569 363 HLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHK 442 (640)
Q Consensus 363 qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~pG~Vpl~Vt~~n~~ 442 (640)
.+++|+||||+|||.+|||||+|+|.||.. ..+|+||||+++|||+++++|||||++|||.||+|||+|+|+++.
T Consensus 5 ~~~~Itd~sP~~gp~sGGTkv~I~G~~L~~-----gs~~~~~fG~~~vpa~~~s~~vl~C~tPp~~~G~v~~~v~~d~~~ 79 (95)
T 2cxk_A 5 SSGMVTDYSPEWSYPEGGVKVLITGPWQEA-----SNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQI 79 (95)
T ss_dssp CCSCCCEEECSEECTTCCCEEEEESSCCCC-----SSCEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTEE
T ss_pred CcEEEEEECCCcccCCCCEEEEEEeECCCC-----CccEEEEECCEEEeEEEeECCEEEEEecCCCCceEeEEEEECCee
Confidence 367999999999999999999999999976 458999999999999999999999999999999999999999986
Q ss_pred CcccceeeeecC
Q 006569 443 PISQVLNFEYRS 454 (640)
Q Consensus 443 ~~Sev~~FEYr~ 454 (640)
+|++++||||+
T Consensus 80 -~s~~~~FeY~~ 90 (95)
T 2cxk_A 80 -ISNSVVFEYKS 90 (95)
T ss_dssp -CSCCEEEEECC
T ss_pred -cCCceEEEEeC
Confidence 69999999996
No 2
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.66 E-value=4e-16 Score=132.34 Aligned_cols=90 Identities=24% Similarity=0.298 Sum_probs=81.7
Q ss_pred cccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHc
Q 006569 536 AKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 613 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~ 613 (640)
+.++|+.++..+++. ++|+ ..|.+.+.+|..|.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|+..
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll---~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLL---EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHH---HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCcHHHHHHHcCCHHHHHHHH---HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 578999999988866 6775 35666667999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhchh
Q 006569 614 GRYESSSYHIYQISM 628 (640)
Q Consensus 614 Gh~eiV~lLLs~GaD 628 (640)
|+.+++++|+.+|||
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999999985
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.65 E-value=5.3e-16 Score=148.06 Aligned_cols=113 Identities=18% Similarity=0.150 Sum_probs=89.4
Q ss_pred cccccHHHHHHHhccCCC----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q 006569 514 CISNSWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAIL 587 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~ 587 (640)
+...+..++++.+.+.+. ....+.++|+.|+..++.. ++|+ ..|++++.+|..|+||||+||..|+.++++
T Consensus 44 a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll---~~gadvn~~d~~G~TpLh~A~~~g~~~~v~ 120 (169)
T 4gpm_A 44 AAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLI---SKGADVNAKDSDGRTPLHHAAENGHKEVVK 120 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH---HTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHH---HCcCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 344555666666644432 3345889999999988765 6774 356666669999999999999999999999
Q ss_pred HHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhh
Q 006569 588 LFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQ 629 (640)
Q Consensus 588 lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~ 629 (640)
+|+.+|++++.+|..|+||||+|+..|+.++|++|+++|||.
T Consensus 121 ~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 121 LLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 999999999999999999999999999999999999999974
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.64 E-value=7.5e-16 Score=147.03 Aligned_cols=118 Identities=19% Similarity=0.172 Sum_probs=100.1
Q ss_pred cccccccHHHHHHHhccCCC----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHH
Q 006569 512 STCISNSWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWA 585 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~i 585 (640)
+.|+..|..++++.|.+.+. ....+.++|+.++..+... ++|+ ..|++.+.+|..|+||||+||..|+.++
T Consensus 9 ~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll---~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 9 IEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLI---SKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH---HTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH---hcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 44556777888888765543 3456899999999998866 5554 4567777799999999999999999999
Q ss_pred HHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 586 ILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 586 v~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+++|+++|+++|.+|..|+||||+||..|+.++|++||.+|+|...+
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~ 132 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTS 132 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 99999999999999999999999999999999999999999976543
No 5
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.56 E-value=1.1e-14 Score=129.22 Aligned_cols=95 Identities=17% Similarity=0.147 Sum_probs=83.7
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~ 612 (640)
.+.++|+.++..+++. ++|+ ..+.+.+..|..|.||||+||..|+.+++++|+.+|+++|.+|..|+||||+|+.
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll---~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYV---AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHH---HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHH---HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 3568899999998876 5664 3566666689999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhchhhhhh
Q 006569 613 YGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 613 ~Gh~eiV~lLLs~GaD~l~r 632 (640)
.|+.++|++|+.+|+|...+
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~ 102 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVK 102 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCC
T ss_pred cCCHHHHHHHHHcCCCCCCc
Confidence 99999999999999986543
No 6
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.53 E-value=3.6e-14 Score=131.59 Aligned_cols=118 Identities=17% Similarity=0.141 Sum_probs=95.4
Q ss_pred cccccccHHHHHHHhccCCC-----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHH
Q 006569 512 STCISNSWAYLFKSVGDKRT-----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTW 584 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~~-----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~ 584 (640)
..++..+..++++.+..... ....+.++|+.++..+++. ++|++ .|.+.+..|..|.||||+||..|+.+
T Consensus 13 ~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~ 89 (165)
T 3twr_A 13 LEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQ---HGADVHAKDKGGLVPLHNACSYGHYE 89 (165)
T ss_dssp HHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHh---cCCCCCccCCCCCCHHHHHHHcCcHH
Confidence 33444556666776654211 1233679999999998866 67753 56666668999999999999999999
Q ss_pred HHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 585 AILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 585 iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
++++|+.+|++++.+|..|+||||+|+..|+.++|++|+.+|+|...+
T Consensus 90 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 137 (165)
T 3twr_A 90 VAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKK 137 (165)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence 999999999999999999999999999999999999999999976543
No 7
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.52 E-value=2e-14 Score=130.07 Aligned_cols=109 Identities=15% Similarity=0.146 Sum_probs=89.6
Q ss_pred cccHHHHHHHhccCCC----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCC-CCCHHHHHHHhCCHHHHHH
Q 006569 516 SNSWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVH-GQGVIHLCAMLGYTWAILL 588 (640)
Q Consensus 516 ~~~w~~ll~~l~~~~~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~-G~TpLHlAA~lG~~~iv~l 588 (640)
..+..++++.+.+.+. ....+.++|+.++. ++.. ++|++ .|.+.+.+|.. |.||||+|+..|+.+++++
T Consensus 21 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~---~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 96 (136)
T 1d9s_A 21 ARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLL---HGAEPNCADPATLTRPVHDAAREGFLDTLVV 96 (136)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHH---HTCCSSCCBTTTTBCHHHHHHHHTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHH---CCCCCCCcCCCCCCCHHHHHHHcCCHHHHHH
Confidence 3445555565544322 23457889999888 7655 67754 56666668888 9999999999999999999
Q ss_pred HHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchh
Q 006569 589 FSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISM 628 (640)
Q Consensus 589 LL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD 628 (640)
|+.+|++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 97 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 97 LHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999986
No 8
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.52 E-value=4.2e-14 Score=127.63 Aligned_cols=97 Identities=16% Similarity=0.096 Sum_probs=86.3
Q ss_pred ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHH
Q 006569 533 LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 610 (640)
Q Consensus 533 ~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~A 610 (640)
...+.++|+.++..+++. ++|++ .|.+.+..|..|.||||+||..|+.+++++|+.+|++++.+|..|+||||+|
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 83 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQ---NGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDA 83 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHH---TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH---cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHH
Confidence 356889999999999866 67753 5666666899999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHhchhhhhh
Q 006569 611 AYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 611 A~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+..|+.++|++|+.+|+|...+
T Consensus 84 ~~~~~~~~v~~Ll~~ga~~~~~ 105 (137)
T 3c5r_A 84 AKNGHVDIVKLLLSYGASRNAV 105 (137)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHcCCHHHHHHHHHcCCCCCCC
Confidence 9999999999999999986543
No 9
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.51 E-value=4.1e-14 Score=127.92 Aligned_cols=111 Identities=17% Similarity=0.150 Sum_probs=77.2
Q ss_pred ccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHH
Q 006569 513 TCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAI 586 (640)
Q Consensus 513 ~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv 586 (640)
.|+..+..++++.+.+.+.. ...+.++|+.|+..++.. ++|++ .|.+.+..|..|.||||+||..|+.+++
T Consensus 20 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~d~~g~t~L~~A~~~~~~~~v 96 (136)
T 2jab_A 20 EAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLK---NGADVNAVDAIGFTPLHLAAFIGHLEIA 96 (136)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH---TTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH---cCCCCCcCCCCCCCHHHHHHHcCCHHHH
Confidence 34455666666666444322 234677888887777655 55643 4555555777788888888888888888
Q ss_pred HHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 006569 587 LLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQI 626 (640)
Q Consensus 587 ~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~G 626 (640)
++|+.+|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 97 ~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 97 EVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 8888888888888888888888888888888888887765
No 10
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.51 E-value=4.2e-14 Score=130.02 Aligned_cols=114 Identities=15% Similarity=0.074 Sum_probs=91.8
Q ss_pred cccHHHHHHHhccCCC---CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHH
Q 006569 516 SNSWAYLFKSVGDKRT---SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFS 590 (640)
Q Consensus 516 ~~~w~~ll~~l~~~~~---~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL 590 (640)
..+..++++.+.+.+. ....+.++|+.|+..+++. ++|+ ..|.+.+..|..|.||||+||..|+.+++++|+
T Consensus 11 ~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll---~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 87 (153)
T 1awc_B 11 RAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLL---RAGVSRDARTKVDRTPLHMAASEGHANIVEVLL 87 (153)
T ss_dssp HHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHH---TTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH---HcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH
Confidence 3444555555533322 2335789999999998866 6774 355566668899999999999999999999999
Q ss_pred HCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 591 WSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 591 ~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
.+|++++.+|..|+||||+|+..|+.++|++|+.+|+|...+
T Consensus 88 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 129 (153)
T 1awc_B 88 KHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQ 129 (153)
T ss_dssp TTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 999999999999999999999999999999999999886543
No 11
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.51 E-value=1.3e-13 Score=120.56 Aligned_cols=92 Identities=25% Similarity=0.312 Sum_probs=82.9
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
..+.++|+.++..++.. ++|++ .+...+..|..|.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|+
T Consensus 33 ~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~ 109 (126)
T 1n0r_A 33 KNGRTPLHLAARNGHLEVVKLLLE---AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAA 109 (126)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCcHHHHHHHcCcHHHHHHHHH---cCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 45789999999988766 67753 56666668999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHhchh
Q 006569 612 YYGRYESSSYHIYQISM 628 (640)
Q Consensus 612 ~~Gh~eiV~lLLs~GaD 628 (640)
..|+.+++++|+++|||
T Consensus 110 ~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 110 RNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HTTCHHHHHHHHHHTCC
T ss_pred HcCcHHHHHHHHHcCCC
Confidence 99999999999999986
No 12
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.51 E-value=7.9e-14 Score=126.05 Aligned_cols=95 Identities=18% Similarity=0.210 Sum_probs=85.4
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
..+.++|+.|+..+++. ++|++ .|.+.+..|..|.||||+||..|+.+++++|+.+|+++|.+|..|+||||+|+
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMA---NGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHH---cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 34789999999999876 67753 56666668999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHhchhhhh
Q 006569 612 YYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 612 ~~Gh~eiV~lLLs~GaD~l~ 631 (640)
..|+.++|++|+.+|+|...
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~ 108 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNA 108 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTC
T ss_pred HcCCHHHHHHHHHcCCCCcC
Confidence 99999999999999988643
No 13
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.50 E-value=5.8e-14 Score=132.39 Aligned_cols=115 Identities=12% Similarity=0.101 Sum_probs=93.0
Q ss_pred cccccHHHHHHHhccC-----CCCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHH
Q 006569 514 CISNSWAYLFKSVGDK-----RTSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAI 586 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~-----~~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv 586 (640)
++..+..++++.+.+. +.....+.++|+.++..++.. ++|++ .|.+.+..|..|.||||+||..|+.+++
T Consensus 12 A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~v 88 (179)
T 3f6q_A 12 QCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIM---RGARINVMNRGDDTPLHLAASHGHRDIV 88 (179)
T ss_dssp HHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHH---cCCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 3445556666666443 222345789999999988766 66743 4666666889999999999999999999
Q ss_pred HHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 587 LLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 587 ~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
++|+.+|+++|.+|..|+||||+|+..|+.++|++|+.+|+|...
T Consensus 89 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 133 (179)
T 3f6q_A 89 QKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI 133 (179)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB
T ss_pred HHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch
Confidence 999999999999999999999999999999999999999987543
No 14
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.50 E-value=6.8e-14 Score=130.63 Aligned_cols=116 Identities=11% Similarity=-0.001 Sum_probs=78.8
Q ss_pred cccccHHHHHHHhccCCC----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q 006569 514 CISNSWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAIL 587 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~ 587 (640)
++..+..++++.+.+.+. ....+.++|+.++..++.. ++|+ ..|.+.+..|..|.||||+|+..|+.++++
T Consensus 43 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll---~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 119 (172)
T 3v30_A 43 ASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLL---ERDVDINIYDWNGGTPLLYAVRGNHVKCVE 119 (172)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH---TTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHH---HcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 344556666666544322 2234667777777777655 5553 345555557777777777777777777777
Q ss_pred HHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 588 LFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 588 lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+|+.+|++++.+|..|+||||+|+..|+.+++++|+.+|++...+
T Consensus 120 ~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~ 164 (172)
T 3v30_A 120 ALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQS 164 (172)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcc
Confidence 777777777777777777777777777777777777777775543
No 15
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.50 E-value=2.3e-14 Score=125.46 Aligned_cols=97 Identities=20% Similarity=0.160 Sum_probs=86.6
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
..+.++|+.++..+++. ++|+ ..+.+.+..|..|.||||+||..|+.+++++|+.+|++++.+|..|+||||+|+
T Consensus 7 ~~g~t~L~~A~~~~~~~~~~~Ll---~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 7 KDGNTPLHNAAKNGHAEEVKKLL---SKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSSCCHHHHHHHHTCHHHHHHHT---TTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHH---HcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 45789999999998866 5663 356666668999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHhchhhhhhh
Q 006569 612 YYGRYESSSYHIYQISMQLVRL 633 (640)
Q Consensus 612 ~~Gh~eiV~lLLs~GaD~l~r~ 633 (640)
..|+.+++++|+++|||...+.
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~ 105 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARS 105 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHS
T ss_pred HCCCHHHHHHHHHcCCCCCcCC
Confidence 9999999999999999977654
No 16
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.50 E-value=9e-14 Score=130.11 Aligned_cols=113 Identities=18% Similarity=0.182 Sum_probs=81.3
Q ss_pred cccHHHHHHHhccCCC----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHH
Q 006569 516 SNSWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLF 589 (640)
Q Consensus 516 ~~~w~~ll~~l~~~~~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lL 589 (640)
..+..++++.+.+.+. ....+.++|+.|+..+++. ++|++ .|.+.+..|..|.||||+|+..|+.+++++|
T Consensus 23 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 99 (169)
T 2y1l_E 23 RAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLK---NGADVNAVDHAGMTPLRLAALFGHLEIVEVL 99 (169)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH---cCCCCCccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3445555565544432 2234677888888877755 56643 4555555777888888888888888888888
Q ss_pred HHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 590 SWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 590 L~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+.+|++++.+|..|+||||+|+..|+.++|++|+.+|+|...
T Consensus 100 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 141 (169)
T 2y1l_E 100 LKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA 141 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 888888888888888888888888888888888888877543
No 17
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.49 E-value=8.3e-14 Score=142.81 Aligned_cols=93 Identities=13% Similarity=0.193 Sum_probs=84.0
Q ss_pred cccccHHHHHHHh---CcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHH
Q 006569 534 PEAKDSFFELTLK---SKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALH 608 (640)
Q Consensus 534 ~~~~~~L~~a~l~---~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH 608 (640)
..+.++|+.|+.. +.+. ++|++ .|++++.+|..|.||||+||..|+.+++++|+.+|++++.+|..|+||||
T Consensus 167 ~~g~t~Lh~A~~~~~~~~~~~v~~Ll~---~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~ 243 (278)
T 1dcq_A 167 EPDETALHLAVRSVDRTSLHIVDFLVQ---NSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLD 243 (278)
T ss_dssp STTCBHHHHHHHHCCTTTHHHHHHHHH---HCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cCCCCcchHHHHhcccchHHHHHHHHH---CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHH
Confidence 4578999999998 5544 77754 57777779999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhchhh
Q 006569 609 WAAYYGRYESSSYHIYQISMQ 629 (640)
Q Consensus 609 ~AA~~Gh~eiV~lLLs~GaD~ 629 (640)
+|+..|+.++|++|+.+|++.
T Consensus 244 ~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 244 IAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999974
No 18
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.49 E-value=1.5e-13 Score=126.49 Aligned_cols=111 Identities=19% Similarity=0.073 Sum_probs=92.5
Q ss_pred cccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q 006569 514 CISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAIL 587 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~ 587 (640)
+.. +..++++.+.+.+.. ...+.++|+.++..+++. ++|++ .|.+.+.+|..|.||||+|+..|+.++++
T Consensus 45 A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 120 (162)
T 1ihb_A 45 MKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLE---FQADVNIEDNEGNLPLHLAAKEGHLRVVE 120 (162)
T ss_dssp CCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 334 777888877655332 345789999999998766 67753 56666668999999999999999999999
Q ss_pred HHHHCCCC-cccccCCCCcHHHHHHHcCCHHHHHHHHHhchh
Q 006569 588 LFSWSGLS-LDFRDKYGWTALHWAAYYGRYESSSYHIYQISM 628 (640)
Q Consensus 588 lLL~~Gad-in~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD 628 (640)
+|+.+|++ ++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 121 ~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 121 FLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999998 699999999999999999999999999999997
No 19
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.49 E-value=4.7e-14 Score=140.00 Aligned_cols=92 Identities=13% Similarity=0.021 Sum_probs=48.7
Q ss_pred cccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCC-cHHHHH--
Q 006569 536 AKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGW-TALHWA-- 610 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~-TpLH~A-- 610 (640)
+.++|+.|+..+++. ++|++ .|++.+.+|..|.||||+||..|+.+++++|+.+|++++.+|..|. ||||+|
T Consensus 70 g~t~L~~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~ 146 (239)
T 1ycs_B 70 GITALHNAVCAGHTEIVKFLVQ---FGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEE 146 (239)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHH---HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCS
T ss_pred CCCHHHHHHHcCCHHHHHHHHH---cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHH
Confidence 455555555555433 44432 2444444555555555555555555555555555555555555444 555555
Q ss_pred HHcCCHHHHHHHHHhchhhh
Q 006569 611 AYYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 611 A~~Gh~eiV~lLLs~GaD~l 630 (640)
+..|+.++|++|+.+|++..
T Consensus 147 ~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 147 MEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp SSTTCCCHHHHHHHHHHHTT
T ss_pred hhhccHHHHHHHHHhhhccc
Confidence 44555555555555555543
No 20
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.49 E-value=1e-13 Score=138.11 Aligned_cols=96 Identities=13% Similarity=0.022 Sum_probs=84.7
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCC-CCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDV-HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 610 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~-~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~A 610 (640)
..+.++|+.|+..++.. ++|++ .|.+.+..+. .|.||||+||..|+.+++++|+.+|++++.+|..|+||||+|
T Consensus 156 ~~g~t~L~~A~~~g~~~~v~~Ll~---~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A 232 (282)
T 1oy3_D 156 YDGHTPLHVAVIHKDAEMVRLLRD---AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSA 232 (282)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH---HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHH
Confidence 45789999999998765 77754 5666666664 599999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHhchhhhhh
Q 006569 611 AYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 611 A~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+..|+.++|++|+.+|||...+
T Consensus 233 ~~~~~~~~v~~Ll~~ga~~~~~ 254 (282)
T 1oy3_D 233 LLRPNPILARLLRAHGAPEPED 254 (282)
T ss_dssp HTSSCHHHHHHHHHTTCCCCCC
T ss_pred HHcCCcHHHHHHHHcCCCcCcC
Confidence 9999999999999999986543
No 21
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.48 E-value=1.2e-13 Score=128.36 Aligned_cols=112 Identities=13% Similarity=0.083 Sum_probs=63.1
Q ss_pred cccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHH
Q 006569 516 SNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLF 589 (640)
Q Consensus 516 ~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lL 589 (640)
..+..++++.+.+.+.. ...+.++|+.++..++.. ++|++ .|.+.+..|..|.||||+|+..|+.+++++|
T Consensus 45 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 121 (167)
T 3v31_A 45 AHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLD---CGVDVNEYDWNGGTPLLYAVHGNHVKCVKML 121 (167)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH---HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH---CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34445555555433221 223456666666655544 44532 3444444566666666666666666666666
Q ss_pred HHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhh
Q 006569 590 SWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 590 L~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l 630 (640)
+.+|++++.+|..|+||||+|+..|+.+++++|+.++++.+
T Consensus 122 l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 122 LESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 66666666666666666666666666666666666665544
No 22
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.48 E-value=3.5e-14 Score=128.38 Aligned_cols=94 Identities=17% Similarity=0.116 Sum_probs=84.4
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCC-CCcHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKY-GWTALHWA 610 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~-G~TpLH~A 610 (640)
..+.++|+.++..+++. ++|++ .|.+.+.+|..|+||||+||. |+.+++++|+.+|++++.+|.. |+||||+|
T Consensus 10 ~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 85 (136)
T 1d9s_A 10 GSSDAGLATAAARGQVETVRQLLE---AGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDA 85 (136)
T ss_dssp CCCSCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHH
T ss_pred CCCccHHHHHHHcCCHHHHHHHHH---cCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHH
Confidence 45789999999999876 67753 566666689999999999999 9999999999999999999999 99999999
Q ss_pred HHcCCHHHHHHHHHhchhhhh
Q 006569 611 AYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 611 A~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+..|+.++|++|+.+|+|...
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~ 106 (136)
T 1d9s_A 86 AREGFLDTLVVLHRAGARLDV 106 (136)
T ss_dssp HHHTCHHHHHHHHHTCCCCCC
T ss_pred HHcCCHHHHHHHHHcCCCCCc
Confidence 999999999999999998544
No 23
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.47 E-value=3.4e-14 Score=131.51 Aligned_cols=115 Identities=15% Similarity=0.172 Sum_probs=89.1
Q ss_pred cccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCC-HHHHHHHhCCHHHH
Q 006569 514 CISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQG-VIHLCAMLGYTWAI 586 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~T-pLHlAA~lG~~~iv 586 (640)
|+..+..++++.+.+.+.. ...+.++|+.++ .+++. ++|+ ..|.+.+.+|..|.| |||+||..|+.+++
T Consensus 19 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll---~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v 94 (156)
T 1bi7_B 19 AAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLL---LHGAEPNCADPATLTRPVHDAAREGFLDTL 94 (156)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHH---TTTCCCCCCCTTTCCCHHHHHHHHTCHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHH---HcCCCCCCcCCCCCcHHHHHHHHCCCHHHH
Confidence 3345566777776554332 345778888874 55544 6774 356666669999999 99999999999999
Q ss_pred HHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 587 LLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 587 ~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
++|+.+|++++.+|..|+||||+|+..|+.++|++|+.+|+|...+
T Consensus 95 ~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~ 140 (156)
T 1bi7_B 95 VVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS 140 (156)
T ss_dssp HHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------
T ss_pred HHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCcc
Confidence 9999999999999999999999999999999999999999987654
No 24
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.47 E-value=1.4e-13 Score=140.21 Aligned_cols=115 Identities=16% Similarity=0.083 Sum_probs=92.9
Q ss_pred cccccHHHHHHHhccCC----CCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q 006569 514 CISNSWAYLFKSVGDKR----TSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAIL 587 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~----~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~ 587 (640)
|+..+..++++.|...+ .....+.++++.++...... ++|+ ..|.+.+.+|..|+||||+||..|+.++++
T Consensus 93 A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll---~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~ 169 (269)
T 4b93_B 93 AALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLL---DSNAKPNKKDLSGNTPLIYACSGGHHELVA 169 (269)
T ss_dssp HHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH---HTTCCSCCCCTTCCCHHHHHHHTTCGGGHH
T ss_pred HHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHH---HCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 33455556666654433 23345788999998888765 5664 356666669999999999999999999999
Q ss_pred HHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 588 LFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 588 lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+|+.+|+++|.+|..|+||||+||..|+.++|++||.+|||...
T Consensus 170 ~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 170 LLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV 213 (269)
T ss_dssp HHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999999999999999999997543
No 25
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.46 E-value=1.3e-13 Score=126.88 Aligned_cols=112 Identities=17% Similarity=0.143 Sum_probs=92.8
Q ss_pred cccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q 006569 514 CISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAIL 587 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~ 587 (640)
++..+..++++.+.+.+.. ...+.++|+.++. ++.. ++|++ .|.+.+..|..|.||||+|+..|+.++++
T Consensus 12 A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 87 (162)
T 1ihb_A 12 AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLL---RGANPDLKDRTGFAVIHDAARAGFLDTLQ 87 (162)
T ss_dssp HHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHH---cCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 3445666777777655432 3457899998877 6655 67753 46666668999999999999999999999
Q ss_pred HHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhh
Q 006569 588 LFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQ 629 (640)
Q Consensus 588 lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~ 629 (640)
+|+.+|++++.+|..|+||||+|+..|+.++|++|+.+|++.
T Consensus 88 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 129 (162)
T 1ihb_A 88 TLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129 (162)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC
Confidence 999999999999999999999999999999999999999874
No 26
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.46 E-value=3.5e-13 Score=128.19 Aligned_cols=94 Identities=22% Similarity=0.213 Sum_probs=61.7
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
..+.++|+.|+..+++. ++|++ .|.+.+..|..|.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|+
T Consensus 66 ~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 142 (192)
T 2rfm_A 66 IEGSTALIWAVKNNRLGIAEKLLS---KGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVAS 142 (192)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH---HTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHH
T ss_pred ccCccHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 34666777776666544 45543 34444446666777777777777777777777777777777777777777777
Q ss_pred HcCCHHHHHHHHHhchhhh
Q 006569 612 YYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 612 ~~Gh~eiV~lLLs~GaD~l 630 (640)
..|+.++|++|+.+|+|..
T Consensus 143 ~~~~~~~v~~Ll~~ga~~~ 161 (192)
T 2rfm_A 143 KYGRSEIVKKLLELGADIS 161 (192)
T ss_dssp HHTCHHHHHHHHHTTCCTT
T ss_pred HcCCHHHHHHHHHCCCCCC
Confidence 7777777777777776644
No 27
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.46 E-value=1.5e-13 Score=130.58 Aligned_cols=93 Identities=29% Similarity=0.291 Sum_probs=79.5
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCccccc-CCCCcHHHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTALHWAA 611 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD-~~G~TpLH~AA 611 (640)
.+.++|+.++..+++. ++|+ ++.+.+..|..|+||||+||..|+.+++++|+.+|+++|.+| ..|+||||+|+
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll----~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLL----EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHT----TTSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHH----hcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4678899999888766 4442 355666688999999999999999999999999999999998 88999999999
Q ss_pred HcCCHHHHHHHHHhchhhhh
Q 006569 612 YYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 612 ~~Gh~eiV~lLLs~GaD~l~ 631 (640)
..|+.++|++|+.+|+|...
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~ 138 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEV 138 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTC
T ss_pred hcCcHHHHHHHHHcCCCCcC
Confidence 99999999999999987643
No 28
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.45 E-value=5.5e-13 Score=124.41 Aligned_cols=114 Identities=14% Similarity=0.060 Sum_probs=94.1
Q ss_pred cccHHHHHHHhccCCC-----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHH
Q 006569 516 SNSWAYLFKSVGDKRT-----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILL 588 (640)
Q Consensus 516 ~~~w~~ll~~l~~~~~-----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~l 588 (640)
..+..++++.+..... ....+.++|+.|+..+++. ++|++ .|.+.+..|..|.||||+|+..|+.+++++
T Consensus 11 ~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 87 (172)
T 3v30_A 11 AQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLE---WGADPHILAKERESALSLASTGGYTDIVGL 87 (172)
T ss_dssp HTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH---HTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHH---cCCCchhhcccCCCHHHHHHHCCCHHHHHH
Confidence 3444555555543322 2345789999999998876 77754 466666689999999999999999999999
Q ss_pred HHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 589 FSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 589 LL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
|+.+|++++.+|..|+||||+|+..|+.++|++|+.+|+|...+
T Consensus 88 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 131 (172)
T 3v30_A 88 LLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTE 131 (172)
T ss_dssp HHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 99999999999999999999999999999999999999986543
No 29
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.45 E-value=1.6e-13 Score=151.60 Aligned_cols=121 Identities=12% Similarity=0.055 Sum_probs=92.2
Q ss_pred cccccHHHHHHHhccCCCC----------ccccccHHHHHHH---hCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHH
Q 006569 514 CISNSWAYLFKSVGDKRTS----------LPEAKDSFFELTL---KSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCA 578 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~----------~~~~~~~L~~a~l---~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA 578 (640)
|+..+..+.++.+...+.. ...+.++|+.|+. .+++. ++|++ .|++++.+|..|+||||+||
T Consensus 139 A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~---~ga~vn~~d~~g~TpLh~A~ 215 (497)
T 3lvq_E 139 AICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ---NGGHLDAKAADGNTALHYAA 215 (497)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHH---HSCCTTCCCSSSCCHHHHHT
T ss_pred HHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHH---cCCCCCccCCCCCcHHHHHH
Confidence 3445555666665444332 3468899999976 55544 77754 57777779999999999999
Q ss_pred HhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhhhccccc
Q 006569 579 MLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVRLSLYAL 638 (640)
Q Consensus 579 ~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r~gl~~~ 638 (640)
..|+.+++++|+.+|+++|.+|..|+||||+|+..|+.+++++|+.+|||... +++|..
T Consensus 216 ~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~-~~~h~~ 274 (497)
T 3lvq_E 216 LYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA-FPLHVD 274 (497)
T ss_dssp TTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC-Ccceee
Confidence 99999999999999999999999999999999999999999999999999765 466543
No 30
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.45 E-value=1.9e-13 Score=125.37 Aligned_cols=90 Identities=19% Similarity=0.181 Sum_probs=51.4
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~ 612 (640)
.+.++|+. +..++.. ++|++ .|.+.+..|..|.||||+||..|+.+++++|+.+|++++.+|..|+||||+|+.
T Consensus 35 ~g~t~L~~-~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 110 (156)
T 1bd8_A 35 FGKTALQV-MMFGSTAIALELLK---QGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQ 110 (156)
T ss_dssp TSCCHHHH-SCTTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred CCCcHHHH-HHcCCHHHHHHHHH---CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 35555655 4444433 44432 344444455666666666666666666666666666666666666666666666
Q ss_pred cCCHHHHHHHHHhchhh
Q 006569 613 YGRYESSSYHIYQISMQ 629 (640)
Q Consensus 613 ~Gh~eiV~lLLs~GaD~ 629 (640)
.|+.++|++|+.+ +|.
T Consensus 111 ~~~~~~v~~Ll~~-~~~ 126 (156)
T 1bd8_A 111 EGHTAVVSFLAAE-SDL 126 (156)
T ss_dssp HTCHHHHHHHHTT-SCT
T ss_pred hChHHHHHHHHhc-cCC
Confidence 6666666666655 443
No 31
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.45 E-value=1.8e-13 Score=133.40 Aligned_cols=93 Identities=17% Similarity=0.125 Sum_probs=67.8
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHC-CCCcccccCCCCcHHHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWS-GLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~-Gadin~rD~~G~TpLH~AA 611 (640)
.+.++|+.|+..+++. ++|+ ..|.+.+.+|..|.||||+||..|+.+++++|+.. |+++|.+|..|+||||+||
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll---~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECL---DNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHH---HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred ccccccccccccCcHHHHHHHH---hCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 4567777777777655 4553 24555555777778888888888888888877777 7788888888888888888
Q ss_pred HcCCHHHHHHHHHhchhhh
Q 006569 612 YYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 612 ~~Gh~eiV~lLLs~GaD~l 630 (640)
..|+.++|++||.+|+|..
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~ 167 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTD 167 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSC
T ss_pred HcCCHHHHHHHHHcCCCCc
Confidence 8888888888888777643
No 32
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.44 E-value=2.4e-13 Score=140.67 Aligned_cols=119 Identities=13% Similarity=0.027 Sum_probs=82.8
Q ss_pred cccccHHHHHHHhccC-----CCCccccccHHHHHHHhCc------HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhCC
Q 006569 514 CISNSWAYLFKSVGDK-----RTSLPEAKDSFFELTLKSK------LKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGY 582 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~-----~~~~~~~~~~L~~a~l~~~------L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~ 582 (640)
|+..++.++++.|.+. +.....+.++++.++.... +.++|+ ..|++.+.+|..|+||||+||..|+
T Consensus 175 A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl---~~gad~n~~d~~g~t~L~~a~~~~~ 251 (337)
T 4g8k_A 175 AAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLL---DHGADVNVRGERGKTPLILAVEKKH 251 (337)
T ss_dssp HHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHH---HTTCCTTCCCGGGCCHHHHHHHTTC
T ss_pred HHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHH---HCCCCCCCcCCCCCCHHHHHHHhhh
Confidence 4456667777766432 1222346677776665443 234443 3455555578888888888888888
Q ss_pred HHHHHHHHH-CCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhhhcc
Q 006569 583 TWAILLFSW-SGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVRLSL 635 (640)
Q Consensus 583 ~~iv~lLL~-~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r~gl 635 (640)
.++++.|+. .|+++|.+|..|+||||+||..|+.++|++||.+|||.-.+.+|
T Consensus 252 ~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~~L 305 (337)
T 4g8k_A 252 LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLV 305 (337)
T ss_dssp HHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCCHH
T ss_pred hHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHH
Confidence 888887776 47888888888888888888888888888888888887776665
No 33
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.44 E-value=4.2e-13 Score=117.36 Aligned_cols=93 Identities=25% Similarity=0.282 Sum_probs=83.7
Q ss_pred cccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHc
Q 006569 536 AKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 613 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~ 613 (640)
+.++|+.|+..+++. ++|++ .+.+.+..|..|.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|+..
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLE---AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHH---HTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CccHHHHHHHcCcHHHHHHHHH---cCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Confidence 678999999998866 77754 4666666899999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhchhhhh
Q 006569 614 GRYESSSYHIYQISMQLV 631 (640)
Q Consensus 614 Gh~eiV~lLLs~GaD~l~ 631 (640)
|+.+++++|+.+|++...
T Consensus 79 ~~~~~~~~Ll~~g~~~~~ 96 (126)
T 1n0r_A 79 GHLEVVKLLLEAGADVNA 96 (126)
T ss_dssp TCHHHHHHHHHTTCCTTC
T ss_pred ChHHHHHHHHHcCCCCcc
Confidence 999999999999987543
No 34
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.44 E-value=3.1e-13 Score=134.24 Aligned_cols=119 Identities=13% Similarity=0.057 Sum_probs=94.9
Q ss_pred ccccccccHHHHHHHhccCCC----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHH
Q 006569 511 KSTCISNSWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTW 584 (640)
Q Consensus 511 k~~a~~~~w~~ll~~l~~~~~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~ 584 (640)
...|+..+..++++.+.+.+. ....+.++|+.|+..+++. ++|++ .|++.+..|..|.||||+||..|+.+
T Consensus 25 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~---~ga~~n~~d~~g~tpLh~A~~~g~~~ 101 (229)
T 2vge_A 25 LLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLIT---AGANVNSPDSHGWTPLHCAASCNDTV 101 (229)
T ss_dssp HHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 334555677777777754432 2345789999999888766 67753 46666668889999999999999999
Q ss_pred HHHHHHHCCCCccccc-CCCCcHHHHH--HHcCCHHHHHHHHHhchhhhhh
Q 006569 585 AILLFSWSGLSLDFRD-KYGWTALHWA--AYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 585 iv~lLL~~Gadin~rD-~~G~TpLH~A--A~~Gh~eiV~lLLs~GaD~l~r 632 (640)
++++|+.+|++++.+| ..|+||||+| +..|+.+++++|+.+|+|...+
T Consensus 102 ~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~ 152 (229)
T 2vge_A 102 ICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLM 152 (229)
T ss_dssp HHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccc
Confidence 9999999999999987 5999999999 8999999999999999986554
No 35
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.44 E-value=4.2e-13 Score=139.26 Aligned_cols=99 Identities=13% Similarity=0.086 Sum_probs=87.0
Q ss_pred cccccHHHHHHHh---CcH--HHHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHH
Q 006569 534 PEAKDSFFELTLK---SKL--KEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALH 608 (640)
Q Consensus 534 ~~~~~~L~~a~l~---~~L--~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH 608 (640)
..+.++|+.|+.. +.+ .++|++ .|++++.+|..|.||||+||..|+.+++++|+.+|++++.+|..|+||||
T Consensus 188 ~~g~t~Lh~A~~~~~~~~~~iv~~Ll~---~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~ 264 (301)
T 2b0o_E 188 APEELVLHLAVKVANQASLPLVDFIIQ---NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALD 264 (301)
T ss_dssp SCEECHHHHHHHTCCTTTHHHHHHHHH---HSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHH
T ss_pred CCCccHHHHHHHhcccCcHHHHHHHHh---cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 4578999999986 443 477754 57777779999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhchhhhhhhccc
Q 006569 609 WAAYYGRYESSSYHIYQISMQLVRLSLY 636 (640)
Q Consensus 609 ~AA~~Gh~eiV~lLLs~GaD~l~r~gl~ 636 (640)
+|+..|+.+++++|+.+|++. ..++|+
T Consensus 265 ~A~~~~~~~iv~~Ll~~ga~~-g~tpLh 291 (301)
T 2b0o_E 265 IARKKHHKECEELLEQAQAGT-FAFPLH 291 (301)
T ss_dssp HHHHHTCHHHHHHHHHHHHHT-TSSCCC
T ss_pred HHHHcCCHHHHHHHHHhcCCC-CCChhH
Confidence 999999999999999999993 556663
No 36
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.43 E-value=1.9e-13 Score=137.27 Aligned_cols=123 Identities=16% Similarity=0.120 Sum_probs=94.2
Q ss_pred ccccccccHHHHHHHhccCCCCc---c---------------ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCC
Q 006569 511 KSTCISNSWAYLFKSVGDKRTSL---P---------------EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHG 570 (640)
Q Consensus 511 k~~a~~~~w~~ll~~l~~~~~~~---~---------------~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G 570 (640)
...|+..++.++++.|.+.+... + .+.++|+.|+..+++. ++|+++...|++.+.+|..|
T Consensus 105 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g 184 (273)
T 2pnn_A 105 LHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVG 184 (273)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTS
T ss_pred HHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCC
Confidence 34455577788888876554332 1 4889999999998766 67743100456666699999
Q ss_pred CCHHHHHHHhCC---------HHHHHHHHHCCCCcc-------cccCCCCcHHHHHHHcCCHHHHHHHHHhch-hhhhhh
Q 006569 571 QGVIHLCAMLGY---------TWAILLFSWSGLSLD-------FRDKYGWTALHWAAYYGRYESSSYHIYQIS-MQLVRL 633 (640)
Q Consensus 571 ~TpLHlAA~lG~---------~~iv~lLL~~Gadin-------~rD~~G~TpLH~AA~~Gh~eiV~lLLs~Ga-D~l~r~ 633 (640)
+||||+||..|+ .+++++|+.+|+++| .+|..|+||||+|+..|+.++|++||.+|| |...+-
T Consensus 185 ~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~ 264 (273)
T 2pnn_A 185 NTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRH 264 (273)
T ss_dssp CCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC------
T ss_pred CcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhh
Confidence 999999999998 789999999999997 499999999999999999999999999999 665543
No 37
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.43 E-value=4.7e-13 Score=129.60 Aligned_cols=117 Identities=21% Similarity=0.180 Sum_probs=97.8
Q ss_pred ccccccHHHHHHHhccCC--C----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHH
Q 006569 513 TCISNSWAYLFKSVGDKR--T----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTW 584 (640)
Q Consensus 513 ~a~~~~w~~ll~~l~~~~--~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~ 584 (640)
.++..+..++++.+.+.+ . ....+.++|+.++..+++. ++|++ .|.+.+..|..|.||||+|+..|+.+
T Consensus 78 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 78 IACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIE---NGASVRIKDKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp HHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH---TTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHH---cCCCccccCCCCCCHHHHHHHcCCHH
Confidence 344566777888876653 2 2345889999999988766 67754 46666669999999999999999999
Q ss_pred HHHHHHHCC-CCcccccCCCCcHHHHHHHcCCHHHHHHHH-Hhchhhhhh
Q 006569 585 AILLFSWSG-LSLDFRDKYGWTALHWAAYYGRYESSSYHI-YQISMQLVR 632 (640)
Q Consensus 585 iv~lLL~~G-adin~rD~~G~TpLH~AA~~Gh~eiV~lLL-s~GaD~l~r 632 (640)
++++|+..| +++|.+|..|+||||+|+..|+.++|++|+ .+|+|...+
T Consensus 155 ~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~ 204 (228)
T 2dzn_A 155 LIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLV 204 (228)
T ss_dssp HHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCB
T ss_pred HHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCcc
Confidence 999999999 999999999999999999999999999999 899986543
No 38
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.43 E-value=6.5e-13 Score=124.20 Aligned_cols=112 Identities=19% Similarity=0.195 Sum_probs=94.1
Q ss_pred cccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHH
Q 006569 512 STCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWA 585 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~i 585 (640)
..++..+..++++.+.+.+.. ...+.++|+.++..++.. ++|++ .|.+.+..|..|.||||+|+..|+.++
T Consensus 52 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~ 128 (169)
T 2y1l_E 52 HLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLK---NGADVNANDMEGHTPLHLAAMFGHLEI 128 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 344556777888887655432 345789999999998866 67753 566666689999999999999999999
Q ss_pred HHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 006569 586 ILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQI 626 (640)
Q Consensus 586 v~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~G 626 (640)
+++|+.+|++++.+|..|+||||+|+..|+.+++++|++.|
T Consensus 129 v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 129 VEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999876
No 39
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.43 E-value=5.7e-13 Score=116.77 Aligned_cols=86 Identities=20% Similarity=0.256 Sum_probs=77.1
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
.++.++|+.++..+++. ++|+ ..+.+.+.+|..|.||||+||..|+.+++++|+.+|++++.+|..|+||||+|+
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll---~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILM---ANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHH---HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CccchHHHHHHHcCCHHHHHHHH---HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHH
Confidence 35788999999998866 6674 356666668999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHH
Q 006569 612 YYGRYESSSYH 622 (640)
Q Consensus 612 ~~Gh~eiV~lL 622 (640)
..|+.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999987
No 40
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.42 E-value=7e-13 Score=128.20 Aligned_cols=91 Identities=18% Similarity=0.182 Sum_probs=47.6
Q ss_pred cccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHc
Q 006569 536 AKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 613 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~ 613 (640)
+.++|+.++..++.. ++|++ .+...+..|..|.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|+..
T Consensus 92 g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 168 (223)
T 2f8y_A 92 GTTPLILAARLAVEGMLEDLIN---SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAARE 168 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHH---TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCcHHHHHHHhCcHHHHHHHHH---cCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHc
Confidence 445555555555433 34422 3333333555555555555555555555555555555555555555555555555
Q ss_pred CCHHHHHHHHHhchhh
Q 006569 614 GRYESSSYHIYQISMQ 629 (640)
Q Consensus 614 Gh~eiV~lLLs~GaD~ 629 (640)
|+.++|++|+.+|+|.
T Consensus 169 ~~~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 169 GSYETAKVLLDHFANR 184 (223)
T ss_dssp TCHHHHHHHHHTTCCT
T ss_pred CCHHHHHHHHHcCCCC
Confidence 5555555555555543
No 41
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.42 E-value=4e-13 Score=133.84 Aligned_cols=116 Identities=16% Similarity=0.196 Sum_probs=96.0
Q ss_pred ccccccHHHHHHHhccCCC-----CccccccHHHHHHHhCc--HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHH
Q 006569 513 TCISNSWAYLFKSVGDKRT-----SLPEAKDSFFELTLKSK--LKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWA 585 (640)
Q Consensus 513 ~a~~~~w~~ll~~l~~~~~-----~~~~~~~~L~~a~l~~~--L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~i 585 (640)
.++..+..++++.+...+. ....+.++|+.++..++ +.++|++ .|.+.+..|..|.||||+||..|+.++
T Consensus 96 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~d~~g~t~L~~A~~~~~~~~ 172 (253)
T 1yyh_A 96 AAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN---SHADVNAVDDLGKSALHWAAAVNNVDA 172 (253)
T ss_dssp HHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHH---TTCCTTCBCTTSCBHHHHHHHHTCHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHH---cCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 3445666777777754432 23458899999998876 4477753 566666689999999999999999999
Q ss_pred HHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 586 ILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 586 v~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+++|+.+|++++.+|..|+||||+|+..|+.++|++|+.+|+|...
T Consensus 173 v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 218 (253)
T 1yyh_A 173 AVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI 218 (253)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc
Confidence 9999999999999999999999999999999999999999988654
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.42 E-value=6.8e-13 Score=129.30 Aligned_cols=120 Identities=13% Similarity=0.041 Sum_probs=92.8
Q ss_pred cccccccHHHHHHHhccCCCCcc-----------------ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCC
Q 006569 512 STCISNSWAYLFKSVGDKRTSLP-----------------EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQG 572 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~~~~~-----------------~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~T 572 (640)
..|+..+..++++.+.+.+.... .+.++|+.|+..++.. ++|++ .|++.+.+|..|.|
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~ga~~~~~d~~g~t 156 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE---HGADIRAQDSLGNT 156 (232)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH---TTCCTTCCCTTSCC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCCC
Confidence 33445666777777755433321 4789999999988765 67753 56666668999999
Q ss_pred HHHHHHHhCCHHHH----HHHHHCCCCc------ccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhhhc
Q 006569 573 VIHLCAMLGYTWAI----LLFSWSGLSL------DFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVRLS 634 (640)
Q Consensus 573 pLHlAA~lG~~~iv----~lLL~~Gadi------n~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r~g 634 (640)
|||+|+..|+.+++ ++|+.+|+++ +.+|..|+||||+|+..|+.++|++||++|++...+.+
T Consensus 157 ~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 228 (232)
T 2rfa_A 157 VLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAHH 228 (232)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhhc
Confidence 99999999999887 8999999988 68999999999999999999999999999988665543
No 43
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.41 E-value=6.7e-13 Score=129.00 Aligned_cols=116 Identities=19% Similarity=0.159 Sum_probs=94.0
Q ss_pred cccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q 006569 514 CISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAIL 587 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~ 587 (640)
++..+..++++.+.+.+.. ...+.++|+.++..++.. ++|++ .|.+.+..|..|.||||+|+..|+.++++
T Consensus 80 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 156 (231)
T 3aji_A 80 AASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLE---GGANPDAKDHYDATAMHRAAAKGNLKMVH 156 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 4445666777777554332 345789999999888765 66743 45555568889999999999999999999
Q ss_pred HHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 588 LFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 588 lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+|+.+|++++.+|..|+||||+|+..|+.+++++|+.+|+|...+
T Consensus 157 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 201 (231)
T 3aji_A 157 ILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIE 201 (231)
T ss_dssp HHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred HHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC
Confidence 999999999999999999999999999999999999999986543
No 44
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.41 E-value=9.3e-13 Score=128.32 Aligned_cols=116 Identities=13% Similarity=0.056 Sum_probs=95.1
Q ss_pred cccccHHHHHHHhccCC--------CCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCC-CCCCCHHHHHHHhCC
Q 006569 514 CISNSWAYLFKSVGDKR--------TSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYD-VHGQGVIHLCAMLGY 582 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~--------~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D-~~G~TpLHlAA~lG~ 582 (640)
++..+..++++.+.+.. .....+.++|+.++..+... ++|++ .|.+.+..+ ..|.||||+|+..|+
T Consensus 86 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 86 ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLE---RGADIDAVDIKSGRSPLIHAVENNS 162 (241)
T ss_dssp HHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH---TTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHH---cCCCcccccccCCCcHHHHHHHcCC
Confidence 44456666766664332 22345889999999998765 67753 566666666 789999999999999
Q ss_pred HHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 583 TWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 583 ~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
.+++++|+.+|+++|.+|..|+||||+|+..|+.++|++|+.+|+|...+
T Consensus 163 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 212 (241)
T 1k1a_A 163 LSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLK 212 (241)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCc
Confidence 99999999999999999999999999999999999999999999986543
No 45
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.41 E-value=2.9e-13 Score=135.25 Aligned_cols=93 Identities=28% Similarity=0.283 Sum_probs=79.7
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCccccc-CCCCcHHHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTALHWAA 611 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD-~~G~TpLH~AA 611 (640)
.+.++|+.|+..+++. ++| .++.+.+..|..|+||||+||..|+.+++++|+.+|+++|.+| ..|+||||+||
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~L----l~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQL----LEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHT----TTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHH----HcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4678899999888766 344 3456666689999999999999999999999999999999998 88999999999
Q ss_pred HcCCHHHHHHHHHhchhhhh
Q 006569 612 YYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 612 ~~Gh~eiV~lLLs~GaD~l~ 631 (640)
..|+.++|++||.+|+|...
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~ 139 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEV 139 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTC
T ss_pred HcCCHHHHHHHHHCCCCCCC
Confidence 99999999999999987643
No 46
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.41 E-value=4.2e-13 Score=133.30 Aligned_cols=120 Identities=14% Similarity=0.060 Sum_probs=97.0
Q ss_pred cccccccHHHHHHHhccCCCCc------------------cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCC
Q 006569 512 STCISNSWAYLFKSVGDKRTSL------------------PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQ 571 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~~~~------------------~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~ 571 (640)
..|+..++.++++.|.+.+... ..+.++|+.|+..++.. ++|+++-..|++.+.+|..|+
T Consensus 98 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~ 177 (260)
T 3jxi_A 98 HIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGN 177 (260)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred HHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCC
Confidence 3445577788888876554331 24789999999998866 677430004666666999999
Q ss_pred CHHHHHHHhCC---------HHHHHHHHHCCCCc-------ccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 572 GVIHLCAMLGY---------TWAILLFSWSGLSL-------DFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 572 TpLHlAA~lG~---------~~iv~lLL~~Gadi-------n~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
||||+||..|+ .+++++|+.+|+++ +.+|..|+||||+|+..|+.++|++||.+|++.--
T Consensus 178 TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 178 TVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp CHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCccc
Confidence 99999999888 78999999999999 78999999999999999999999999999998643
No 47
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.40 E-value=2.1e-13 Score=126.14 Aligned_cols=94 Identities=17% Similarity=0.116 Sum_probs=83.5
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCc-HHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWT-ALHWA 610 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~T-pLH~A 610 (640)
..+.++|+.|+..+++. ++|+ ..|.+.+..|..|.||||+|+ .|+.+++++|+.+|+++|.+|..|+| |||+|
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll---~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALL---EAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHH---TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred ccchHHHHHHHHcCCHHHHHHHH---HcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 45789999999999876 6774 356666668999999999986 99999999999999999999999999 99999
Q ss_pred HHcCCHHHHHHHHHhchhhhh
Q 006569 611 AYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 611 A~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+..|+.++|++||.+|+|...
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~ 106 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDV 106 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSC
T ss_pred HHCCCHHHHHHHHHcCCCCcc
Confidence 999999999999999987554
No 48
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.40 E-value=1.8e-12 Score=120.37 Aligned_cols=114 Identities=13% Similarity=0.127 Sum_probs=93.3
Q ss_pred cccHHHHHHHhccC----CCCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHH
Q 006569 516 SNSWAYLFKSVGDK----RTSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLF 589 (640)
Q Consensus 516 ~~~w~~ll~~l~~~----~~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lL 589 (640)
..+..++++.+.+. +.....+.++|+.|+..+++. ++|++ .|.+.+..|..|.||||+|+..|+.+++++|
T Consensus 12 ~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 88 (167)
T 3v31_A 12 AQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQ---NGADPQLLGKGRESALSLACSKGYTDIVKML 88 (167)
T ss_dssp HTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHH---cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 34445555554332 223345789999999998866 67753 4666666899999999999999999999999
Q ss_pred HHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 590 SWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 590 L~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+.+|++++.+|..|+||||+|+..|+.++|++|+.+|+|...+
T Consensus 89 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 131 (167)
T 3v31_A 89 LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIE 131 (167)
T ss_dssp HHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 9999999999999999999999999999999999999986543
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.40 E-value=4.3e-13 Score=133.13 Aligned_cols=122 Identities=16% Similarity=0.058 Sum_probs=94.2
Q ss_pred ccccccccHHHHHHHhccCCCCc----cc-------------cccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCC
Q 006569 511 KSTCISNSWAYLFKSVGDKRTSL----PE-------------AKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQ 571 (640)
Q Consensus 511 k~~a~~~~w~~ll~~l~~~~~~~----~~-------------~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~ 571 (640)
...|+..+..++++.|.+.+... .. +.++|+.|+..+++. ++|+++-..|++.+.+|..|+
T Consensus 94 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~ 173 (256)
T 2etb_A 94 LHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGN 173 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCC
Confidence 33445567778888775554331 11 789999999988766 677421004566666899999
Q ss_pred CHHHHHHH--hCCHH-------HHHHHHHCCCCc-------ccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 572 GVIHLCAM--LGYTW-------AILLFSWSGLSL-------DFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 572 TpLHlAA~--lG~~~-------iv~lLL~~Gadi-------n~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
||||+||. .|+.+ ++++|+.+|+++ +.+|..|+||||+|+..|+.++|++||++|++..-.
T Consensus 174 TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~ 250 (256)
T 2etb_A 174 TVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAAA 250 (256)
T ss_dssp CHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCc
Confidence 99999998 77877 999999999999 899999999999999999999999999999886543
No 50
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.40 E-value=2.5e-13 Score=133.21 Aligned_cols=116 Identities=11% Similarity=0.039 Sum_probs=96.7
Q ss_pred cccccccHHHHHHHhccCCC----------CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCC-CCCCHHHHHH
Q 006569 512 STCISNSWAYLFKSVGDKRT----------SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDV-HGQGVIHLCA 578 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~~----------~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~-~G~TpLHlAA 578 (640)
..++..+..++++.+...+. ....+.++|+.|+..+++. ++|++ .|++.+..+. .|.||||+|+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~~g~tpL~~A~ 159 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS---LGADVNAQEPCNGRTALHLAV 159 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH---HTCCTTCCCTTTCCCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCCCCCHHHHHH
Confidence 33445666777777755432 2234889999999998865 77754 5666666776 9999999999
Q ss_pred HhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhh
Q 006569 579 MLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 579 ~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l 630 (640)
..|+.+++++|+.+|++++.+|..|+||||+|+..|+.+++++|+.+|++.+
T Consensus 160 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 160 DLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp HTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred HcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 9999999999999999999999999999999999999999999999999877
No 51
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.39 E-value=1e-12 Score=130.51 Aligned_cols=92 Identities=14% Similarity=0.105 Sum_probs=82.9
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCC--------------CCCCCHHHHHHHhCCHHHHHHHHH---CCCC
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYD--------------VHGQGVIHLCAMLGYTWAILLFSW---SGLS 595 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D--------------~~G~TpLHlAA~lG~~~iv~lLL~---~Gad 595 (640)
.+.++|+.|+..+++. ++|++ .|++.+..+ ..|.||||+||..|+.+++++|+. +|++
T Consensus 92 ~g~t~L~~A~~~g~~~~v~~Ll~---~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~ 168 (260)
T 3jxi_A 92 RGQTALHIAIERRCKHYVELLVE---KGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD 168 (260)
T ss_dssp ESBCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh---CCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC
Confidence 6889999999999866 67753 566666566 589999999999999999999999 9999
Q ss_pred cccccCCCCcHHHHHHHcCC---------HHHHHHHHHhchhh
Q 006569 596 LDFRDKYGWTALHWAAYYGR---------YESSSYHIYQISMQ 629 (640)
Q Consensus 596 in~rD~~G~TpLH~AA~~Gh---------~eiV~lLLs~GaD~ 629 (640)
+|.+|..|+||||+||..|+ .+++++||.+|+|.
T Consensus 169 ~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 169 LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccc
Confidence 99999999999999999988 79999999999987
No 52
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.39 E-value=1.2e-12 Score=124.38 Aligned_cols=109 Identities=16% Similarity=0.103 Sum_probs=70.8
Q ss_pred ccccHHHHHHHhccC-----CCCccccccHHHHHHHhCcHH--HHHHHHHhcC-CCcccCCCCCCCHHHHHHHhCC----
Q 006569 515 ISNSWAYLFKSVGDK-----RTSLPEAKDSFFELTLKSKLK--EWLLERVVEG-SKTTEYDVHGQGVIHLCAMLGY---- 582 (640)
Q Consensus 515 ~~~~w~~ll~~l~~~-----~~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g-~~~~~~D~~G~TpLHlAA~lG~---- 582 (640)
+..+..++++.+... +.....+.++|+.++..++.. ++|++ .+ ...+..|..|.||||+|+..|.
T Consensus 80 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~~g~t~L~~A~~~~~~~~~ 156 (201)
T 3hra_A 80 GAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLE---DGREDIDFQNDFGYTALIEAVGLREGNQL 156 (201)
T ss_dssp HHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHH---HCCCCTTCCCTTSCCHHHHHHHSSCCSHH
T ss_pred HHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHH---cCCCCcCCCCCCCCCHHHHHHHhccchhh
Confidence 345555666655421 122234667777777776654 56643 34 3344467777777777777776
Q ss_pred -HHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 006569 583 -TWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQI 626 (640)
Q Consensus 583 -~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~G 626 (640)
.+++++|+.+|++++.+|..|+||||+|+..|+.+++++|+.+|
T Consensus 157 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 157 YQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 77777777777777777777777777777777777777777655
No 53
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.39 E-value=7.2e-13 Score=131.33 Aligned_cols=116 Identities=13% Similarity=0.036 Sum_probs=95.6
Q ss_pred cccccHHHHHHHhccC-CC----CccccccHHHHHHHhCc------HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhCC
Q 006569 514 CISNSWAYLFKSVGDK-RT----SLPEAKDSFFELTLKSK------LKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGY 582 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~-~~----~~~~~~~~L~~a~l~~~------L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~ 582 (640)
++..+..++++.+.+. +. ....+.++|+.++..+. +.++|+ ..|.+.+.+|..|.||||+|+..|+
T Consensus 155 A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll---~~g~~~~~~~~~g~t~L~~A~~~~~ 231 (285)
T 1wdy_A 155 AAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLL---DHGADVNVRGERGKTPLILAVEKKH 231 (285)
T ss_dssp HHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHH---HTTCCSSCCCTTSCCHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHH---HcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 4456677788777643 22 23457899999998876 335664 3566666689999999999999999
Q ss_pred HHHHHHHHH-CCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 583 TWAILLFSW-SGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 583 ~~iv~lLL~-~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
.+++++|+. .|++++.+|..|+||||+|+..|+.++|++|+.+|||...+
T Consensus 232 ~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~ 282 (285)
T 1wdy_A 232 LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282 (285)
T ss_dssp HHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCS
T ss_pred HHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcc
Confidence 999999999 89999999999999999999999999999999999986543
No 54
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.39 E-value=6.1e-13 Score=133.55 Aligned_cols=93 Identities=13% Similarity=0.068 Sum_probs=83.4
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCC--------------CCCCHHHHHHHhCCHHHHHHHHH---CCCC
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDV--------------HGQGVIHLCAMLGYTWAILLFSW---SGLS 595 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~--------------~G~TpLHlAA~lG~~~iv~lLL~---~Gad 595 (640)
.+.++|+.|+..+++. ++|++ .|++.+..+. .|.||||+||..|+.+++++|+. +|++
T Consensus 100 ~g~tpL~~A~~~g~~~~v~~Ll~---~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad 176 (273)
T 2pnn_A 100 KGQTALHIAIERRNMTLVTLLVE---NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD 176 (273)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH---CCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC
Confidence 5889999999999866 67754 4666665665 79999999999999999999999 9999
Q ss_pred cccccCCCCcHHHHHHHcCC---------HHHHHHHHHhchhhh
Q 006569 596 LDFRDKYGWTALHWAAYYGR---------YESSSYHIYQISMQL 630 (640)
Q Consensus 596 in~rD~~G~TpLH~AA~~Gh---------~eiV~lLLs~GaD~l 630 (640)
+|.+|..|+||||+||..|+ .++|++||.+|+|..
T Consensus 177 ~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 177 ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999 899999999999874
No 55
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.39 E-value=1.6e-12 Score=125.64 Aligned_cols=119 Identities=13% Similarity=0.064 Sum_probs=97.6
Q ss_pred ccccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCC-CcccCCCCCCCHHHHHHHhCCH
Q 006569 511 KSTCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGS-KTTEYDVHGQGVIHLCAMLGYT 583 (640)
Q Consensus 511 k~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~-~~~~~D~~G~TpLHlAA~lG~~ 583 (640)
...|+..+..++++.+.+.+.. ...+.++|+.|+..++.. ++|++ .+. ..+..+..|.||||+|+..|+.
T Consensus 29 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~~g~t~L~~A~~~~~~ 105 (223)
T 2f8y_A 29 LHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIR---NRATDLDARMHDGTTPLILAARLAVE 105 (223)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---BTTSCTTCCCTTCCCHHHHHHHHTCH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH---cCCCCcccCCCCCCcHHHHHHHhCcH
Confidence 3445556777788877554332 345789999999998866 67753 454 3444889999999999999999
Q ss_pred HHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 584 WAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 584 ~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+++++|+.+|++++.+|..|+||||+|+..|+.+++++|+.+|+|...+
T Consensus 106 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 154 (223)
T 2f8y_A 106 GMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQ 154 (223)
T ss_dssp HHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 9999999999999999999999999999999999999999999886543
No 56
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.39 E-value=8.9e-13 Score=124.21 Aligned_cols=94 Identities=17% Similarity=0.147 Sum_probs=80.5
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCC-cccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSK-TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~-~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
+..++|+.++..+++. ++|++ .++. .+..|..|.||||+||..|+.+++++|+.+|++++.+|..|+||||+|+
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~---~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLD---NTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAA 80 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHH---CTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHh---cCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 4668899999999877 56643 4333 4448999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHhchhhhh
Q 006569 612 YYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 612 ~~Gh~eiV~lLLs~GaD~l~ 631 (640)
..|+.++|++||.+|+|...
T Consensus 81 ~~~~~~~v~~Ll~~g~~~~~ 100 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKADINA 100 (179)
T ss_dssp HTTCHHHHHHHHHTTCCTTC
T ss_pred HcCCHHHHHHHHHcCCCCCc
Confidence 99999999999999987643
No 57
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.39 E-value=2e-12 Score=128.34 Aligned_cols=93 Identities=17% Similarity=0.053 Sum_probs=82.8
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCC-------------CCCHHHHHHHhCCHHHHHHHHH---CCCC
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVH-------------GQGVIHLCAMLGYTWAILLFSW---SGLS 595 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~-------------G~TpLHlAA~lG~~~iv~lLL~---~Gad 595 (640)
..+.++|+.|+..+++. ++|++ .|++.+..|.. |.||||+||..|+.+++++|+. +|++
T Consensus 88 ~~g~t~L~~A~~~g~~~~v~~Ll~---~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~ 164 (256)
T 2etb_A 88 YQGHSALHIAIEKRSLQCVKLLVE---NGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS 164 (256)
T ss_dssp TTTCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHH---cCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC
Confidence 35889999999999866 67753 56666656665 9999999999999999999999 9999
Q ss_pred cccccCCCCcHHHHHHH--cCCHH-------HHHHHHHhchhh
Q 006569 596 LDFRDKYGWTALHWAAY--YGRYE-------SSSYHIYQISMQ 629 (640)
Q Consensus 596 in~rD~~G~TpLH~AA~--~Gh~e-------iV~lLLs~GaD~ 629 (640)
+|.+|..|+||||+||. .++.+ +|++|+.+|+|.
T Consensus 165 ~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 165 LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 99999999999999999 88988 999999999998
No 58
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.38 E-value=4.8e-13 Score=113.20 Aligned_cols=63 Identities=27% Similarity=0.264 Sum_probs=58.8
Q ss_pred CCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 569 HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 569 ~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+|+||||+||..|+.+++++|+..|+++|.+|..|+||||+|+..|+.++|++|+.+|+|...
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 63 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 489999999999999999999999999999999999999999999999999999999987543
No 59
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.38 E-value=3.1e-12 Score=121.66 Aligned_cols=111 Identities=16% Similarity=0.122 Sum_probs=93.1
Q ss_pred ccccccHHHHHHHhccCCC----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHH
Q 006569 513 TCISNSWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAI 586 (640)
Q Consensus 513 ~a~~~~w~~ll~~l~~~~~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv 586 (640)
.++..+..++++.+.+.+. ....+.++|+.++..++.. ++|+ ..|.+.+..|..|.||||+|+..|+.+++
T Consensus 74 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll---~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 150 (192)
T 2rfm_A 74 WAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLL---EHGANVNDRNLEGETPLIVASKYGRSEIV 150 (192)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH---HTTCCSSCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH---HCCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 3445666777777654432 2345789999999988866 6775 35666666999999999999999999999
Q ss_pred HHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 006569 587 LLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQI 626 (640)
Q Consensus 587 ~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~G 626 (640)
++|+.+|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 151 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 151 KKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999976
No 60
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.38 E-value=5.1e-13 Score=123.79 Aligned_cols=113 Identities=12% Similarity=0.018 Sum_probs=93.3
Q ss_pred ccccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHH
Q 006569 511 KSTCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTW 584 (640)
Q Consensus 511 k~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~ 584 (640)
...++..+..++++.+.+.+.. ...+.++|+.++..++.. ++|++ .|.+.+..|..|.||||+|+..|+.+
T Consensus 46 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~ 122 (165)
T 3twr_A 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVK---HGAVVNVADLWKFTPLHEAAAKGKYE 122 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHh---CCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 3445556778888887655433 345789999999998866 67753 56666669999999999999999999
Q ss_pred HHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhch
Q 006569 585 AILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQIS 627 (640)
Q Consensus 585 iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~Ga 627 (640)
++++|+.+|++++.+|..|+||||+|+. |+.+++++|+.+||
T Consensus 123 ~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 123 ICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999999999999999999999877 99999999999886
No 61
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.38 E-value=1.8e-12 Score=126.39 Aligned_cols=117 Identities=15% Similarity=0.068 Sum_probs=97.6
Q ss_pred ccccccHHHHHHHhccCC-C----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHH
Q 006569 513 TCISNSWAYLFKSVGDKR-T----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWA 585 (640)
Q Consensus 513 ~a~~~~w~~ll~~l~~~~-~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~i 585 (640)
.++..+..++++.+...+ . ....+.++|+.++..++.. ++|++ .|.+.+..|..|.||||+|+..|+.++
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~ 159 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLS---KGSDINIRDNEENICLHWAAFSGCVDI 159 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHHCCHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH---CCCCCCccCCCCCCHHHHHHHCCCHHH
Confidence 344566778888876554 2 2345789999999988765 67753 566666689999999999999999999
Q ss_pred HHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 586 ILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 586 v~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+++|+.+|++++.+|..|+||||+|+..|+.+++++|+.+|+|...+
T Consensus 160 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~ 206 (237)
T 3b7b_A 160 AEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLK 206 (237)
T ss_dssp HHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCcc
Confidence 99999999999999999999999999999999999999999986543
No 62
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.37 E-value=1.8e-12 Score=126.29 Aligned_cols=115 Identities=17% Similarity=0.091 Sum_probs=91.3
Q ss_pred cccccHHHHHHHhccC-C----CCccccccHHHHHHHhCcHH--HHHHHHHhcCCCc-----ccCCCCCCCHHHHHHHhC
Q 006569 514 CISNSWAYLFKSVGDK-R----TSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKT-----TEYDVHGQGVIHLCAMLG 581 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~-~----~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~-----~~~D~~G~TpLHlAA~lG 581 (640)
|+..+..++++.+... + .....+.++|+.|+..+++. ++|++ .+... ...|..|.||||+||..|
T Consensus 10 A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 86 (232)
T 2rfa_A 10 AAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLME---AAPELVFEPMTSELYEGQTALHIAVINQ 86 (232)
T ss_dssp HHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---HCGGGGGCCCCSTTTTTCCHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH---cCchhccccccccCCCCcCHHHHHHHcC
Confidence 3345556666666543 2 22345889999999998866 67754 34433 336789999999999999
Q ss_pred CHHHHHHHHHCCCCcccccC-------------CCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 582 YTWAILLFSWSGLSLDFRDK-------------YGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 582 ~~~iv~lLL~~Gadin~rD~-------------~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+.+++++|+.+|++++.++. .|+||||+|+..|+.++|++||.+|+|...
T Consensus 87 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 149 (232)
T 2rfa_A 87 NVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA 149 (232)
T ss_dssp CHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 99999999999999999876 799999999999999999999999987543
No 63
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.37 E-value=1.4e-12 Score=133.54 Aligned_cols=96 Identities=19% Similarity=0.156 Sum_probs=83.5
Q ss_pred cccccHHHHHHHhCc-----HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHH
Q 006569 534 PEAKDSFFELTLKSK-----LKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALH 608 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~-----L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH 608 (640)
..+.++|+.++...+ +.++|+ ..|.+.+.+|..|+||||+||..|+.+++++|+.+|+++|.+|..|+||||
T Consensus 209 ~~~~t~L~~A~~~~~~~~~~~~~~Ll---~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~ 285 (351)
T 3utm_A 209 QSHETALHCAVASLHPKRKQVAELLL---RKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALH 285 (351)
T ss_dssp TTCCCHHHHHHHCCSTTHHHHHHHHH---HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHHhCccHHHHHHHHH---HcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 446789999988732 346664 356666669999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhchhhhhh
Q 006569 609 WAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 609 ~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+|+..|+.++|++|+.+|+|...+
T Consensus 286 ~A~~~~~~~~v~~Ll~~gad~~~~ 309 (351)
T 3utm_A 286 RAALAGHLQTCRLLLSYGSDPSII 309 (351)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHcCcHHHHHHHHHcCCCCCCc
Confidence 999999999999999999986543
No 64
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.37 E-value=1.5e-13 Score=132.90 Aligned_cols=90 Identities=23% Similarity=0.125 Sum_probs=48.6
Q ss_pred ccccHHHHHHHhCc--------HHHHHHHHHhcCCCcccCCCCCC-CHHHHHHHhCC-----HHHHHHHHH-CCCCcccc
Q 006569 535 EAKDSFFELTLKSK--------LKEWLLERVVEGSKTTEYDVHGQ-GVIHLCAMLGY-----TWAILLFSW-SGLSLDFR 599 (640)
Q Consensus 535 ~~~~~L~~a~l~~~--------L~~~Ll~kl~~g~~~~~~D~~G~-TpLHlAA~lG~-----~~iv~lLL~-~Gadin~r 599 (640)
.++++|+.++..++ +.++|+ ..|++++.+|+.|+ ||||+|+..|+ .+++++|+. +|+++|.+
T Consensus 74 ~g~TpLh~a~~~~~~~~~~~~~iv~~Ll---~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~ 150 (186)
T 3t8k_A 74 EGTTLFFPLFQGGGNDITGTTELCKIFL---EKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIK 150 (186)
T ss_dssp TCCCTHHHHHHHCTTCHHHHHHHHHHHH---HTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCC
T ss_pred CCCcHHHHHHHcCCcchhhHHHHHHHHH---HCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCccc
Confidence 35566665555442 123342 23444444555666 66666655332 335555665 56666666
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhch
Q 006569 600 DKYGWTALHWAAYYGRYESSSYHIYQIS 627 (640)
Q Consensus 600 D~~G~TpLH~AA~~Gh~eiV~lLLs~Ga 627 (640)
|..|+||||+|+..|+.++|++|+..+.
T Consensus 151 d~~G~TpL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 151 DKWGLTALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp CTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence 6666666666666666666666655443
No 65
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.37 E-value=2.3e-12 Score=131.90 Aligned_cols=117 Identities=16% Similarity=0.096 Sum_probs=95.0
Q ss_pred cccccccHHHHHHHhccC-C----CCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHH
Q 006569 512 STCISNSWAYLFKSVGDK-R----TSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTW 584 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~-~----~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~ 584 (640)
+.++..+..+.++.+... + .....+.++|+.|+..+++. ++|++ .|.+.+..|..|.||||+||..|+.+
T Consensus 29 ~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~g~~~ 105 (351)
T 3utm_A 29 LEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQ---HGADVHAKDKGGLVPLHNACSYGHYE 105 (351)
T ss_dssp HHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH---cCCCCCccCCCCCcHHHHHHHCCCHH
Confidence 334444445555554332 2 22345789999999999876 77754 56666669999999999999999999
Q ss_pred HHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 585 AILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 585 iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
++++|+.+|++++.+|..|+||||+|+..|+.++|++|+.+|++...
T Consensus 106 iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 152 (351)
T 3utm_A 106 VTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTL 152 (351)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 99999999999999999999999999999999999999999998654
No 66
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.37 E-value=9.9e-13 Score=130.95 Aligned_cols=117 Identities=14% Similarity=0.067 Sum_probs=97.0
Q ss_pred cccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCC-CcccCCCCCCCHHHHHHHhCCHH
Q 006569 512 STCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGS-KTTEYDVHGQGVIHLCAMLGYTW 584 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~-~~~~~D~~G~TpLHlAA~lG~~~ 584 (640)
..|+..+..++++.|.+.+.. ...+.++|+.|+..++.. ++|++ .+. ..+..+..|.||||+|+..|+.+
T Consensus 62 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~~g~t~L~~A~~~~~~~ 138 (253)
T 1yyh_A 62 HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIR---NRATDLDARMHDGTTPLILAARLAVEG 138 (253)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH---STTSCTTCCCTTCCCHHHHHHHHTCSS
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH---cCCCCccccCCCCCcHHHHHHHcChHH
Confidence 344556777888877655332 345789999999998866 66743 454 44448899999999999999999
Q ss_pred HHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 585 AILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 585 iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
++++|+.+|+++|.+|..|+||||+|+..|+.++|++||.+|+|...
T Consensus 139 ~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 185 (253)
T 1yyh_A 139 MLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM 185 (253)
T ss_dssp HHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999998654
No 67
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.37 E-value=3.1e-12 Score=117.47 Aligned_cols=108 Identities=12% Similarity=0.048 Sum_probs=90.6
Q ss_pred cccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHH
Q 006569 512 STCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWA 585 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~i 585 (640)
..++..+..++++.+.+.+.. ...+.++|+.++..++.. ++|+ ..|.+.+.+|..|.||||+|+..|+.++
T Consensus 39 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll---~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 115 (153)
T 1awc_B 39 HLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLL---KHGADVNAKDMLKMTALHWATEHNHQEV 115 (153)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH---TTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH---HcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 334456677888887665432 345789999999988866 6774 3566666699999999999999999999
Q ss_pred HHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHH
Q 006569 586 ILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYH 622 (640)
Q Consensus 586 v~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lL 622 (640)
+++|+.+|++++.+|..|+||||+|+..|+.+++++|
T Consensus 116 v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 116 VELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999999999999999999987
No 68
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.37 E-value=5.4e-13 Score=135.71 Aligned_cols=115 Identities=15% Similarity=0.082 Sum_probs=84.4
Q ss_pred cccccHHHHHHHhccCCC-----CccccccHHHHHHHh-----CcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhC
Q 006569 514 CISNSWAYLFKSVGDKRT-----SLPEAKDSFFELTLK-----SKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLG 581 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~-----~~~~~~~~L~~a~l~-----~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG 581 (640)
|+..+..++++.+.+.+. ....+.++|+.+++. +.+. ++|+ ..|......|..|+||||+||..|
T Consensus 118 A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll---~~g~~~~~~~~~g~tpLh~A~~~g 194 (276)
T 4hbd_A 118 SVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLF---RLGNINAKASQAGQTALMLAVSHG 194 (276)
T ss_dssp HHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHH---HHSCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHH---HcCCCccccCCCCCCHHHHHHHcC
Confidence 445666777777755433 234577888887743 2222 4443 334444447788999999999999
Q ss_pred CHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHH-hchhhhh
Q 006569 582 YTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIY-QISMQLV 631 (640)
Q Consensus 582 ~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs-~GaD~l~ 631 (640)
+.+++++|+.+|+++|.+|..|+||||+||..|+.++|++||. +|+|...
T Consensus 195 ~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~ 245 (276)
T 4hbd_A 195 RVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL 245 (276)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC
T ss_pred CHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC
Confidence 9999999999999999999999999999999999999999998 7877543
No 69
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.36 E-value=9.1e-13 Score=127.56 Aligned_cols=115 Identities=16% Similarity=0.040 Sum_probs=94.8
Q ss_pred cccccccHHHHHHHhccCC--C-----CccccccHHHHHHHhCcHH--HHHHHHHhcC--CCcccCCCCCCCHHHHHHHh
Q 006569 512 STCISNSWAYLFKSVGDKR--T-----SLPEAKDSFFELTLKSKLK--EWLLERVVEG--SKTTEYDVHGQGVIHLCAML 580 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~--~-----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g--~~~~~~D~~G~TpLHlAA~l 580 (640)
..++..+..++++.+...+ . ....+.++|+.++..+++. ++|+ ..+ ...+..|..|.||||+|+..
T Consensus 41 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll---~~g~~~~~~~~~~~g~t~L~~A~~~ 117 (228)
T 2dzn_A 41 HWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLY---DRPLKPDLNKITNQGVTCLHLAVGK 117 (228)
T ss_dssp HHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHH---SSSSCCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHH---hCCCCcccccCCcCCCCHHHHHHHc
Confidence 3344567778888876554 2 2245789999999998866 5664 344 44455889999999999999
Q ss_pred CCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhc-hhh
Q 006569 581 GYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQI-SMQ 629 (640)
Q Consensus 581 G~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~G-aD~ 629 (640)
|+.+++++|+.+|++++.+|..|+||||+|+..|+.+++++|+.+| ++.
T Consensus 118 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 167 (228)
T 2dzn_A 118 KWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAV 167 (228)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCS
T ss_pred CCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccc
Confidence 9999999999999999999999999999999999999999999999 543
No 70
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.36 E-value=1.6e-12 Score=139.02 Aligned_cols=116 Identities=12% Similarity=0.132 Sum_probs=99.1
Q ss_pred ccccccHHHHHHHhccCCC----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHH
Q 006569 513 TCISNSWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAI 586 (640)
Q Consensus 513 ~a~~~~w~~ll~~l~~~~~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv 586 (640)
.++..++.++++.+...+. ....+.++|+.++..+++. ++|++ .|...+..|..|+||||+||..|+.++|
T Consensus 251 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~L~~A~~~g~~~~v 327 (437)
T 1n11_A 251 LAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK---HGVMVDATTRMGYTPLHVASHYGNIKLV 327 (437)
T ss_dssp HHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH---HTCCTTCCCSSCCCHHHHHHHSSCSHHH
T ss_pred HHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh---CCccCCCCCCCCCCHHHHHHHcCcHHHH
Confidence 3445777888888865543 2345789999999998866 77754 5667777899999999999999999999
Q ss_pred HHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 587 LLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 587 ~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
++|+.+|+++|.+|..|+||||+|+..|+.++|++|+.+|||...
T Consensus 328 ~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 328 KFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCC
Confidence 999999999999999999999999999999999999999998654
No 71
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.36 E-value=2.3e-12 Score=134.65 Aligned_cols=117 Identities=9% Similarity=0.115 Sum_probs=98.0
Q ss_pred cccccc--HHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCC-----cccCCCCCCCHHHHHHH
Q 006569 513 TCISNS--WAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSK-----TTEYDVHGQGVIHLCAM 579 (640)
Q Consensus 513 ~a~~~~--w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~-----~~~~D~~G~TpLHlAA~ 579 (640)
.++..+ +.++++.|.+.+.. ...+.++|+.|+..++.. ++|++ .+.. .+..|..|.||||+||.
T Consensus 144 ~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~---~g~~~~~~~~~~~~~~g~t~L~~A~~ 220 (364)
T 3ljn_A 144 WCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMD---TVPSKSSLRLDYANKQGNSHLHWAIL 220 (364)
T ss_dssp HHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---HCSCSSSCCTTCCCTTCCCTTHHHHT
T ss_pred HHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHh---cccccccccccccCCCCCcHHHHHHH
Confidence 344566 78888887554332 345889999999998866 77754 4555 55589999999999999
Q ss_pred hCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 580 LGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 580 lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
.|+.+++++|+.+|+++|.+|..|+||||+|+..|+.++|++||.+|++...+
T Consensus 221 ~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~ 273 (364)
T 3ljn_A 221 INWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQ 273 (364)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhh
Confidence 99999999999999999999999999999999999999999999999886443
No 72
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.36 E-value=3.4e-12 Score=129.81 Aligned_cols=90 Identities=17% Similarity=0.117 Sum_probs=81.6
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHH-CCCCcccccCCCCcHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALHWA 610 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~-~Gadin~rD~~G~TpLH~A 610 (640)
..+.++|+.|+..++.. ++|+ ..|++.+.+|..|.||||+||..|+.+++++|+. .|++++.+|..|+||||+|
T Consensus 181 ~~g~tpLh~A~~~g~~~~v~~Ll---~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A 257 (276)
T 4hbd_A 181 QAGQTALMLAVSHGRVDVVKALL---ACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVA 257 (276)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHH---HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHH---hCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHH
Confidence 45889999999998866 6775 3566666699999999999999999999999999 8999999999999999999
Q ss_pred HHcCCHHHHHHHHHhc
Q 006569 611 AYYGRYESSSYHIYQI 626 (640)
Q Consensus 611 A~~Gh~eiV~lLLs~G 626 (640)
+..|+.++|++|++++
T Consensus 258 ~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 258 LDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHTCHHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHhcc
Confidence 9999999999999875
No 73
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.36 E-value=1.5e-12 Score=131.46 Aligned_cols=93 Identities=22% Similarity=0.267 Sum_probs=75.5
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~ 612 (640)
.+.++|+.|+..+++. ++|++ .|.+.+..|..|.||||+||..|+.+++++|+.+|+++|.+|..|+||||+|+.
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLE---RGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAAS 115 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHH---HCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHH---cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 3567788888888766 56643 466666688888889998888888888888888888888888888899998888
Q ss_pred cCCHHHHHHHHHhchhhh
Q 006569 613 YGRYESSSYHIYQISMQL 630 (640)
Q Consensus 613 ~Gh~eiV~lLLs~GaD~l 630 (640)
.|+.++|++|+.+|++..
T Consensus 116 ~g~~~~v~~Ll~~g~~~~ 133 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHVG 133 (299)
T ss_dssp HTCHHHHHHHHHTTCCTT
T ss_pred cCCHHHHHHHHhCCCCCC
Confidence 888888888888888654
No 74
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.36 E-value=1.9e-12 Score=123.11 Aligned_cols=120 Identities=14% Similarity=0.161 Sum_probs=98.1
Q ss_pred ccccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHH
Q 006569 511 KSTCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTW 584 (640)
Q Consensus 511 k~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~ 584 (640)
...|+..+..++++.+.+.+.. ...+.++|+.++..++.. ++|+++ .+...+..|..|.||||+|+..|+.+
T Consensus 43 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~--~~~~~~~~~~~g~t~L~~A~~~~~~~ 120 (201)
T 3hra_A 43 LNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKH--ATPDLNKHNRYGGNALIPAAEKGHID 120 (201)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH--SCCCTTCCCTTSCCSHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc--cCcccccccCCCCcHHHHHHHcCCHH
Confidence 3344556778888887655433 345789999999998866 677532 33344558999999999999999999
Q ss_pred HHHHHHHCC-CCcccccCCCCcHHHHHHHcCC-----HHHHHHHHHhchhhhhh
Q 006569 585 AILLFSWSG-LSLDFRDKYGWTALHWAAYYGR-----YESSSYHIYQISMQLVR 632 (640)
Q Consensus 585 iv~lLL~~G-adin~rD~~G~TpLH~AA~~Gh-----~eiV~lLLs~GaD~l~r 632 (640)
++++|+.+| ++++.+|..|+||||+|+..|+ .++|++|+.+|+|...+
T Consensus 121 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~ 174 (201)
T 3hra_A 121 NVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIK 174 (201)
T ss_dssp HHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCcc
Confidence 999999999 9999999999999999999998 99999999999986544
No 75
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.36 E-value=3.9e-12 Score=116.52 Aligned_cols=107 Identities=18% Similarity=0.100 Sum_probs=90.2
Q ss_pred ccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHH
Q 006569 515 ISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILL 588 (640)
Q Consensus 515 ~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~l 588 (640)
+..+..++++.+.+.+.. ...+.++|+.|+..++.. ++|+ ..|.+.+..|..|.||||+|+..|+.+++++
T Consensus 43 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll---~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 119 (156)
T 1bd8_A 43 MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLV---EHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119 (156)
T ss_dssp SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH---HTTCCSCCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH---HcCCCCCCcCCCCCcHHHHHHHhChHHHHHH
Confidence 445667777777554332 345889999999998866 6775 3566666689999999999999999999999
Q ss_pred HHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHh
Q 006569 589 FSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQ 625 (640)
Q Consensus 589 LL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~ 625 (640)
|+.. ++++.+|..|+||||+|+..|+.++|++|+++
T Consensus 120 Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 120 LAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999 99999999999999999999999999999875
No 76
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.36 E-value=1.7e-12 Score=127.26 Aligned_cols=116 Identities=14% Similarity=0.079 Sum_probs=94.1
Q ss_pred cccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCC------cccCCCCCCCHHHHHHHhC
Q 006569 514 CISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSK------TTEYDVHGQGVIHLCAMLG 581 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~------~~~~D~~G~TpLHlAA~lG 581 (640)
|+..+..++++.|.+.+.. ...+.++|+.++..+.+. ++|++ .+.. ....+..|.||||+||..|
T Consensus 52 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 128 (236)
T 1ikn_D 52 AVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQ---SCTTPHLHSILKATNYNGHTCLHLASIHG 128 (236)
T ss_dssp HHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHH---STTTTSSSCGGGCCCTTCCCHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHh---cccchhHHHHhhccCCCCCCHHHHHHHcC
Confidence 3345566777777655432 345789999999998866 67754 3322 2337889999999999999
Q ss_pred CHHHHHHHHHCCCCcccccC-CCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 582 YTWAILLFSWSGLSLDFRDK-YGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 582 ~~~iv~lLL~~Gadin~rD~-~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+.+++++|+.+|++++.+|. .|+||||+|+..|+.++|++||.+|+|...+
T Consensus 129 ~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 180 (236)
T 1ikn_D 129 YLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 180 (236)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCC
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Confidence 99999999999999999998 9999999999999999999999999975443
No 77
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.35 E-value=2.3e-12 Score=129.03 Aligned_cols=115 Identities=14% Similarity=0.051 Sum_probs=92.2
Q ss_pred cccccHHHHHHHhccCCC----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q 006569 514 CISNSWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAIL 587 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~ 587 (640)
|+..+..++++.+.+.+. ....+.++|+.|+..++.. ++|++ .|++.+..|..|.||||+|+..|+.++++
T Consensus 10 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 86 (261)
T 2xai_A 10 AAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLK---HGAQVNGVTADWHTPLFNACVSGSWDCVN 86 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 444566777777754432 3346889999999988866 67753 56666668999999999999999999999
Q ss_pred HHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 588 LFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 588 lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+|+.+|++++. +..|+||||+|+..|+.++|++|+.+|+|...+
T Consensus 87 ~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 130 (261)
T 2xai_A 87 LLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHK 130 (261)
T ss_dssp HHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcC
Confidence 99999999985 456999999999999999999999999876543
No 78
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.35 E-value=1.9e-12 Score=129.76 Aligned_cols=115 Identities=11% Similarity=-0.047 Sum_probs=94.4
Q ss_pred ccccccHHHHHHHhccCCCC---ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q 006569 513 TCISNSWAYLFKSVGDKRTS---LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAIL 587 (640)
Q Consensus 513 ~a~~~~w~~ll~~l~~~~~~---~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~ 587 (640)
.++..+..++++.+.+.+.. ...+.++|+.++..++.. ++|+ ..|.+.+..|..|.||||+|+..|+.++++
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll---~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 151 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLI---AYGGNIDHKISHLGTPLYLACENQQRACVK 151 (261)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHH---HTTCCTTCCBTTTBCHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHH---HcCCCCCcCCCCCCCHHHHHHHhCCHHHHH
Confidence 34456667777777555433 234789999999988765 6674 356666668999999999999999999999
Q ss_pred HHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 588 LFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 588 lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+|+.+|+++|. |..|+||||+|+..|+.++|++|+.+|+|...
T Consensus 152 ~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~ 194 (261)
T 2xai_A 152 KLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQA 194 (261)
T ss_dssp HHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999995 89999999999999999999999999998654
No 79
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.35 E-value=1.4e-12 Score=129.63 Aligned_cols=95 Identities=15% Similarity=0.149 Sum_probs=85.2
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~ 612 (640)
.+.++|+.|+..+++. ++|++ .|.+.+..|..|+||||+||..|+.+++++|+.+|+++|.+|..|+||||+||.
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~---~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~ 96 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVK---EMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAAS 96 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHH---HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred chhHHHHHHHHcCCHHHHHHHHh---cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 4667899999999876 67753 566666699999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhchhhhhh
Q 006569 613 YGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 613 ~Gh~eiV~lLLs~GaD~l~r 632 (640)
.|+.++|++||.+|+|...+
T Consensus 97 ~g~~~~v~~Ll~~ga~~~~~ 116 (229)
T 2vge_A 97 CNDTVICMALVQHGAAIFAT 116 (229)
T ss_dssp TTCHHHHHHHHTTTCCTTCC
T ss_pred cCCHHHHHHHHHcCCCcccc
Confidence 99999999999999987554
No 80
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.35 E-value=3.2e-12 Score=126.60 Aligned_cols=116 Identities=21% Similarity=0.218 Sum_probs=96.2
Q ss_pred cccccHHHHHHHhccCCCC-----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHH
Q 006569 514 CISNSWAYLFKSVGDKRTS-----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAI 586 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~-----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv 586 (640)
++..+..++++.+.+.+.. ...+.++|+.|+..++.. ++|++ .|.+.+..|..|.||||+|+..|+.+++
T Consensus 12 A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~v 88 (285)
T 1wdy_A 12 AVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR---HGADPVLRKKNGATPFLLAAIAGSVKLL 88 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH---cCCCCcccCCCCCCHHHHHHHcCCHHHH
Confidence 4445566677766554332 234689999999998866 67753 5666666899999999999999999999
Q ss_pred HHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 587 LLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 587 ~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
++|+.+|++++.+|..|+||||+|+..|+.+++++|+.+|++...+
T Consensus 89 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 134 (285)
T 1wdy_A 89 KLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLR 134 (285)
T ss_dssp HHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccc
Confidence 9999999999999999999999999999999999999999986644
No 81
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.35 E-value=8.3e-13 Score=134.77 Aligned_cols=113 Identities=19% Similarity=0.197 Sum_probs=70.5
Q ss_pred cccccHHHHHHHhccCCCC--ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHH
Q 006569 514 CISNSWAYLFKSVGDKRTS--LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLF 589 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~--~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lL 589 (640)
|+..+..++++.+.+.+.. ..++.++|+.|+..+++. ++|++ .|++.+..|..|.||||+||..|+.+++++|
T Consensus 38 A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~L 114 (285)
T 3kea_A 38 AIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLF---SGLDDSQFDDKGNTALYYAVDSGNMQTVKLF 114 (285)
T ss_dssp HHHTTCHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH---CCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 3345555666665443221 123566777776665543 55532 3555445666777777777777777777777
Q ss_pred HHCCCCcccccCCC-CcHHHHHHHcCCHHHHHHHHHhchhh
Q 006569 590 SWSGLSLDFRDKYG-WTALHWAAYYGRYESSSYHIYQISMQ 629 (640)
Q Consensus 590 L~~Gadin~rD~~G-~TpLH~AA~~Gh~eiV~lLLs~GaD~ 629 (640)
+.+|++++.+|..| .||||+|+..|+.++|++|+.+|++.
T Consensus 115 l~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 115 VKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp HHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred HhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 77777777777777 47777777777777777777766655
No 82
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.35 E-value=1.5e-12 Score=129.10 Aligned_cols=95 Identities=16% Similarity=0.228 Sum_probs=84.1
Q ss_pred ccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHH
Q 006569 535 EAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~ 612 (640)
.+.++|+.++..+++. ++|+ ..|.+.+..|..|+||||+||..|+.+++++|+.+|+++|.+|..|+||||+||.
T Consensus 36 ~~~t~L~~A~~~g~~~~v~~Ll---~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~ 112 (239)
T 1ycs_B 36 LPLALLLDSSLEGEFDLVQRII---YEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAAS 112 (239)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHT---STTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHH
T ss_pred hhhHHHHHHHHcCCHHHHHHHH---HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 3578999999998876 5563 4555666699999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhchhhhhh
Q 006569 613 YGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 613 ~Gh~eiV~lLLs~GaD~l~r 632 (640)
.|+.++|++||.+|+|...+
T Consensus 113 ~~~~~~v~~Ll~~ga~~~~~ 132 (239)
T 1ycs_B 113 CNNVQVCKFLVESGAAVFAM 132 (239)
T ss_dssp TTCHHHHHHHHHTTCCTTCC
T ss_pred cCCHHHHHHHHHcCCCccee
Confidence 99999999999999987644
No 83
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.35 E-value=2.9e-12 Score=129.40 Aligned_cols=66 Identities=26% Similarity=0.388 Sum_probs=62.0
Q ss_pred CCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 566 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 566 ~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
.+..|.||||+||..|+.+++++|+.+|+++|.+|..|+||||+|+..|+.++|++||.+|+|...
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~ 260 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA 260 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC
Confidence 346789999999999999999999999999999999999999999999999999999999998654
No 84
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.34 E-value=3.2e-12 Score=130.38 Aligned_cols=107 Identities=18% Similarity=0.138 Sum_probs=88.1
Q ss_pred HHHHHHhccCC--CCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCC
Q 006569 520 AYLFKSVGDKR--TSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS 595 (640)
Q Consensus 520 ~~ll~~l~~~~--~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gad 595 (640)
.++.+.+...+ .....+.++|+.|+..+++. ++|++ .|.+.+.. +|.||||+||..|+.+++++|+.+|++
T Consensus 13 ~~v~~lL~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~---~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 87 (285)
T 3kea_A 13 KQLKSFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLLN---AGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLD 87 (285)
T ss_dssp HHHHHHHHSTTTTCCCTTSCCHHHHHHHTTCHHHHHHHHH---TTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCccCCCCCCHHHHHHHcCCHHHHHHHHh---CCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 44444443332 23356899999999999876 67753 45544445 499999999999999999999999999
Q ss_pred cccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 596 LDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 596 in~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+|.+|..|+||||+||..|+.++|++|+.+|+|...
T Consensus 88 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 123 (285)
T 3kea_A 88 DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF 123 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG
T ss_pred CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCc
Confidence 999999999999999999999999999999998765
No 85
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.34 E-value=1.2e-12 Score=130.24 Aligned_cols=118 Identities=12% Similarity=0.001 Sum_probs=94.5
Q ss_pred cccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCC-----------------------
Q 006569 512 STCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSK----------------------- 562 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~----------------------- 562 (640)
..|+..+..++++.|.+.+.. ...+.++|+.|+..++.. ++|++ .+..
T Consensus 50 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (282)
T 1oy3_D 50 HLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQ---PRPSHPRDASDTYLTQSQDCTPDTSHA 126 (282)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSS---SCCSSCCCC------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhc---cCCCCchhhHHHHhhcccccCcchhcc
Confidence 344457778888887655433 345789999999888765 56643 2322
Q ss_pred ------------------------cccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCC-CCcHHHHHHHcCCHH
Q 006569 563 ------------------------TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKY-GWTALHWAAYYGRYE 617 (640)
Q Consensus 563 ------------------------~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~-G~TpLH~AA~~Gh~e 617 (640)
.+..|..|.||||+||..|+.+++++|+.+|++++.+|.. |+||||+||..|+.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~ 206 (282)
T 1oy3_D 127 PAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAAS 206 (282)
T ss_dssp -----------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred hhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHH
Confidence 2337889999999999999999999999999999999865 999999999999999
Q ss_pred HHHHHHHhchhhhhh
Q 006569 618 SSSYHIYQISMQLVR 632 (640)
Q Consensus 618 iV~lLLs~GaD~l~r 632 (640)
+|++||.+|+|...+
T Consensus 207 ~v~~Ll~~gad~~~~ 221 (282)
T 1oy3_D 207 VLELLLKAGADPTAR 221 (282)
T ss_dssp HHHHHHHTTCCTTCC
T ss_pred HHHHHHHcCCCCccc
Confidence 999999999987654
No 86
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.33 E-value=1.4e-12 Score=136.40 Aligned_cols=95 Identities=17% Similarity=0.109 Sum_probs=85.1
Q ss_pred ccccHHHHHHHhC--cHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCC-----cccccCCCCc
Q 006569 535 EAKDSFFELTLKS--KLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS-----LDFRDKYGWT 605 (640)
Q Consensus 535 ~~~~~L~~a~l~~--~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gad-----in~rD~~G~T 605 (640)
.+.++|+.++..+ ++. ++|++ .|++.+..|..|.||||+||..|+.+++++|+.+|++ +|.+|..|+|
T Consensus 137 ~g~t~L~~A~~~g~~~~~~v~~Ll~---~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t 213 (364)
T 3ljn_A 137 KGQTALHWCVGLGPEYLEMIKILVQ---LGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNS 213 (364)
T ss_dssp SCCCHHHHHHHSCGGGHHHHHHHHH---HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCC
T ss_pred CCCCHHHHHHHcCCchHHHHHHHHH---cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCc
Confidence 4789999999988 554 77864 4667667999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 606 ALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 606 pLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
|||+||..|+.++|++||.+|+|...+
T Consensus 214 ~L~~A~~~g~~~~v~~Ll~~gad~~~~ 240 (364)
T 3ljn_A 214 HLHWAILINWEDVAMRFVEMGIDVNME 240 (364)
T ss_dssp TTHHHHTTTCHHHHHHHHTTTCCTTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999986543
No 87
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.33 E-value=3.6e-12 Score=134.94 Aligned_cols=109 Identities=17% Similarity=0.115 Sum_probs=89.8
Q ss_pred HHHHHHHhccCCCCc------------cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHH
Q 006569 519 WAYLFKSVGDKRTSL------------PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTW 584 (640)
Q Consensus 519 w~~ll~~l~~~~~~~------------~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~ 584 (640)
..++++.|.+.+... ..+.++|+.|+..+++. ++|+++ .+.+.+..|..|.||||+||..|+.+
T Consensus 250 ~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~--~~~~~n~~d~~g~TpL~~A~~~g~~~ 327 (373)
T 2fo1_E 250 QVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE--KGSNKDKQDEDGKTPIMLAAQEGRIE 327 (373)
T ss_dssp HHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH--SCCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred hHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHh--cCCCccCcCCCCCCHHHHHHHcCCHH
Confidence 667777765544332 25789999999988866 677542 23555569999999999999999999
Q ss_pred HHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhh
Q 006569 585 AILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQ 629 (640)
Q Consensus 585 iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~ 629 (640)
++++|+.+|++++.+|..|+||||+|+.+||.++|++|+.+|++.
T Consensus 328 iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 328 VVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp HHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred HHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 999999999999999999999999999999999999999999874
No 88
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.32 E-value=2.3e-12 Score=131.17 Aligned_cols=97 Identities=15% Similarity=0.107 Sum_probs=86.1
Q ss_pred CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHH
Q 006569 532 SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHW 609 (640)
Q Consensus 532 ~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~ 609 (640)
....+.++|+.|+..++.. ++|+ ..+++....+..|.||||+|+..|+.+++++|+.+|+++|.+|..|+||||+
T Consensus 82 ~d~~G~TpLh~A~~~g~~~~v~~Ll---~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~ 158 (269)
T 4b93_B 82 TSQDGSSPLHVAALHGRADLIPLLL---KHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIY 158 (269)
T ss_dssp CCTTSCCHHHHHHHTTCTTHHHHHH---HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHH
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHH---hcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 3456899999999988744 7775 3566666689999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHhchhhhh
Q 006569 610 AAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 610 AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
||..|+.++|++||.+|+|+..
T Consensus 159 A~~~g~~~~v~~Ll~~gadvn~ 180 (269)
T 4b93_B 159 ACSGGHHELVALLLQHGASINA 180 (269)
T ss_dssp HHHTTCGGGHHHHHHTTCCTTC
T ss_pred HHHCCCHHHHHHHHHCCCCCCc
Confidence 9999999999999999997643
No 89
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.31 E-value=4.7e-12 Score=128.98 Aligned_cols=115 Identities=10% Similarity=-0.053 Sum_probs=93.3
Q ss_pred ccccccHHHHHHHhccCCCC---ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q 006569 513 TCISNSWAYLFKSVGDKRTS---LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAIL 587 (640)
Q Consensus 513 ~a~~~~w~~ll~~l~~~~~~---~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~ 587 (640)
.++..+..++++.+.+.+.. ...+.++|+.++..+++. ++|+ ..|.+.+..|..|.||||+|+..|+.++++
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll---~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~ 207 (285)
T 3d9h_A 131 NACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLI---AYGGNIDHKISHLGTPLYLACENQQRACVK 207 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHH---HTTCCTTCCBTTTBCHHHHHHHTTCHHHHH
T ss_pred HHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH---HCCCCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 34455667777777555332 234789999999988766 6674 356666668999999999999999999999
Q ss_pred HHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 588 LFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 588 lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+|+.+|+++|. |..|+||||+|+..|+.++|++|+.+|+|...
T Consensus 208 ~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~ 250 (285)
T 3d9h_A 208 KLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQA 250 (285)
T ss_dssp HHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 99999999994 89999999999999999999999999988654
No 90
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.30 E-value=5e-12 Score=126.26 Aligned_cols=113 Identities=15% Similarity=0.071 Sum_probs=91.7
Q ss_pred ccccccHHHHHHHhccC---CCCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCC-CCCCCHHHHHHHhCCHHHH
Q 006569 513 TCISNSWAYLFKSVGDK---RTSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYD-VHGQGVIHLCAMLGYTWAI 586 (640)
Q Consensus 513 ~a~~~~w~~ll~~l~~~---~~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D-~~G~TpLHlAA~lG~~~iv 586 (640)
.++..+..++++.+..+ +.....+.++|+.|+..+++. ++|+ ..|++.+..| ..|.||||+||..|+.+++
T Consensus 51 ~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll---~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v 127 (244)
T 3ui2_A 51 TAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLA---EAGADLDHRDMRGGLTALHMAAGYVRPEVV 127 (244)
T ss_dssp HHHTTTCHHHHHHTTTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH---HTTCCTTCCCSSSCCCHHHHHHHTTCHHHH
T ss_pred HHHHcCCHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH---HcCCCCCcCCCCCCCCHHHHHHHcCCHHHH
Confidence 34455666777776552 122345889999999999876 6775 3566666666 8899999999999999999
Q ss_pred HHHHHCCCCcccccCCCCcHHHHHH----------------HcCCHHHHHHHHHhchh
Q 006569 587 LLFSWSGLSLDFRDKYGWTALHWAA----------------YYGRYESSSYHIYQISM 628 (640)
Q Consensus 587 ~lLL~~Gadin~rD~~G~TpLH~AA----------------~~Gh~eiV~lLLs~GaD 628 (640)
++|+.+|++++.+|..|+||||+|+ ..|+.+++++|+.++.+
T Consensus 128 ~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 128 EALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 9999999999999999999999988 67999999999998654
No 91
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.30 E-value=8.6e-12 Score=121.47 Aligned_cols=118 Identities=15% Similarity=0.056 Sum_probs=93.9
Q ss_pred cccccccHHHHHHHhcc----C----CCCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhC
Q 006569 512 STCISNSWAYLFKSVGD----K----RTSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLG 581 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~----~----~~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG 581 (640)
..|+..+..++++.+.+ . +.....+.++|+.|+..++.. ++|++ .|.+.+..|..|.||||+|+..|
T Consensus 14 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~l~~A~~~~ 90 (241)
T 1k1a_A 14 HIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT---AGASPMALDRHGQTAAHLACEHR 90 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHH---cCCCccccCCCCCCHHHHHHHcC
Confidence 33445566666665532 2 222345889999999988766 67753 56666668899999999999999
Q ss_pred CHHHHHHHHHCCC----CcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 582 YTWAILLFSWSGL----SLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 582 ~~~iv~lLL~~Ga----din~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
+.++++.|+..|. +++.+|..|+||||+|+..|+.+++++|+.+|++...+
T Consensus 91 ~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 145 (241)
T 1k1a_A 91 SPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAV 145 (241)
T ss_dssp CHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred CHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 9999999999987 89999999999999999999999999999999986543
No 92
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.30 E-value=5.3e-12 Score=129.39 Aligned_cols=97 Identities=15% Similarity=0.100 Sum_probs=80.4
Q ss_pred ccccHHHHHHHhCcHHHHHHHHHhcCCCcc------cCCCCCCCHHHHHHHh---CCHHHHHHHHHCCCCcccccCCCCc
Q 006569 535 EAKDSFFELTLKSKLKEWLLERVVEGSKTT------EYDVHGQGVIHLCAML---GYTWAILLFSWSGLSLDFRDKYGWT 605 (640)
Q Consensus 535 ~~~~~L~~a~l~~~L~~~Ll~kl~~g~~~~------~~D~~G~TpLHlAA~l---G~~~iv~lLL~~Gadin~rD~~G~T 605 (640)
....+|+.++..+++.... ..+..|.+.+ ..|..|.||||+||.. |+.+++++|+.+|+++|.+|..|+|
T Consensus 129 ~~l~~l~~a~~~~d~~~~~-~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~T 207 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLL-QAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHH-HHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCC
T ss_pred hhhhhhhhHhhhcccHHHH-HHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCC
Confidence 3456788888888877422 1134555532 2488999999999999 8999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 606 ALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 606 pLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
|||+||..|+.++|++||.+|||...+
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~~~ 234 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIEIA 234 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 999999999999999999999986543
No 93
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.30 E-value=2.6e-12 Score=133.80 Aligned_cols=121 Identities=15% Similarity=0.027 Sum_probs=94.8
Q ss_pred cccccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCc-----HHHHHHHHHhcCCCcccCCCCCCCHHHHHHH-
Q 006569 510 SKSTCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSK-----LKEWLLERVVEGSKTTEYDVHGQGVIHLCAM- 579 (640)
Q Consensus 510 ~k~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~-----L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~- 579 (640)
..+.|+..++.++++.|.+.+.. ...+.++|+.|+..++ ..+.|++... .+.+.+|..|.||||+||.
T Consensus 134 pLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~--~~~~~~d~~g~tpLh~A~~~ 211 (327)
T 1sw6_A 134 PLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY--PCLILEDSMNRTILHHIIIT 211 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG--GGGGEECTTCCCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhh--ccccCCCCCCCCHHHHHHHH
Confidence 34455667888899888666543 3458899999998754 2244544321 2345589999999999999
Q ss_pred ---hCCHHHHHHHHHCCC---------------------------------------------CcccccCCCCcHHHHHH
Q 006569 580 ---LGYTWAILLFSWSGL---------------------------------------------SLDFRDKYGWTALHWAA 611 (640)
Q Consensus 580 ---lG~~~iv~lLL~~Ga---------------------------------------------din~rD~~G~TpLH~AA 611 (640)
.|+.+++++|+..++ ++|.+|..|+||||+||
T Consensus 212 ~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~ 291 (327)
T 1sw6_A 212 SGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAA 291 (327)
T ss_dssp HTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHH
Confidence 899999999987743 58889999999999999
Q ss_pred HcCCHHHHHHHHHhchhhhhh
Q 006569 612 YYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 612 ~~Gh~eiV~lLLs~GaD~l~r 632 (640)
..|+.++|++||.+|||...+
T Consensus 292 ~~g~~~~v~~Ll~~Gad~~~~ 312 (327)
T 1sw6_A 292 RLGNISIVDALLDYGADPFIA 312 (327)
T ss_dssp HHCCHHHHHHHHHTTCCTTCC
T ss_pred HcCCHHHHHHHHHcCCCCccc
Confidence 999999999999999986543
No 94
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.29 E-value=6.3e-12 Score=129.97 Aligned_cols=110 Identities=15% Similarity=0.030 Sum_probs=85.7
Q ss_pred ccHHHHHHHhccCC----CCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHH
Q 006569 517 NSWAYLFKSVGDKR----TSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFS 590 (640)
Q Consensus 517 ~~w~~ll~~l~~~~----~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL 590 (640)
.....+++.|.+.+ .....+.++|+.++..+... ++|++ ..+.+++.+|..|+||||+||..|+.++|++|+
T Consensus 216 ~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~--~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll 293 (337)
T 4g8k_A 216 SDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE--QEHIEINDTDSDGKTALLLAVELKLKKIAELLC 293 (337)
T ss_dssp TTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHT--STTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHH--hcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 34455666654433 33456899999999998866 45532 135556669999999999999999999999999
Q ss_pred HCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhhh
Q 006569 591 WSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVRL 633 (640)
Q Consensus 591 ~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r~ 633 (640)
++|+++|.+ ||||+|+..|+.++|++||++|||+-...
T Consensus 294 ~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d~~~ 331 (337)
T 4g8k_A 294 KRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKEDFHP 331 (337)
T ss_dssp TTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC----
T ss_pred HCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCCCCC
Confidence 999999765 59999999999999999999999875543
No 95
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.29 E-value=2.5e-12 Score=125.34 Aligned_cols=115 Identities=13% Similarity=0.066 Sum_probs=84.3
Q ss_pred cccHHHHHHHhccCCC----CccccccHHHHHHHhCcHH--HHHHHHHhc-CCCcccCCCCCCCHHHHHHHhCCHHHHHH
Q 006569 516 SNSWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLK--EWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILL 588 (640)
Q Consensus 516 ~~~w~~ll~~l~~~~~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~-g~~~~~~D~~G~TpLHlAA~lG~~~iv~l 588 (640)
..+..++++.+.+.+. ....+.++|+.|+..+++. ++|+ .. |.+.+.+|..|.||||+||..|+.+++++
T Consensus 82 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll---~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~ 158 (222)
T 3ehr_A 82 KRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLF---TQPNIELNQQNKLGDTALHAAAWKGYADIVQL 158 (222)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHT---TSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred ccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHH---cCCCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 3445566666544332 2345889999999998866 6663 34 55666699999999999999999999999
Q ss_pred HHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhhh
Q 006569 589 FSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVRL 633 (640)
Q Consensus 589 LL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r~ 633 (640)
|+.+|++++.+|..|+||||+|+..|+.++++.|+.+|++..++.
T Consensus 159 Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 159 LLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp HHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred HHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 999999999999999999999999999999999999999876653
No 96
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.29 E-value=1.4e-11 Score=119.53 Aligned_cols=115 Identities=15% Similarity=0.110 Sum_probs=96.2
Q ss_pred cccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHH
Q 006569 514 CISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAIL 587 (640)
Q Consensus 514 a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~ 587 (640)
|+..+..++++.+.+.+.. ...+.++|+.++..++.. ++|++ .|.+.+..|..|.||||+|+..|+.++++
T Consensus 47 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 123 (231)
T 3aji_A 47 ACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLV---KGAHVNAVNQNGCTPLHYAASKNRHEIAV 123 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHH---TTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHH---cCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 4456667777777554332 345789999999998866 67753 56666668999999999999999999999
Q ss_pred HHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 588 LFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 588 lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+|+.+|++++.+|..|+||||+|+..|+.+++++|+.+|+|...
T Consensus 124 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 167 (231)
T 3aji_A 124 MLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI 167 (231)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred HHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc
Confidence 99999999999999999999999999999999999999987543
No 97
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.29 E-value=1.2e-11 Score=120.47 Aligned_cols=117 Identities=16% Similarity=0.132 Sum_probs=97.0
Q ss_pred cccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcC-CCcccCCCCCCCHHHHHHHhCCHH
Q 006569 512 STCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEG-SKTTEYDVHGQGVIHLCAMLGYTW 584 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g-~~~~~~D~~G~TpLHlAA~lG~~~ 584 (640)
..++..+..++++.+.+.+.. ...+.++|+.++..++.. ++|++ .+ ...+..+..|.||||+|+..|+.+
T Consensus 49 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~---~~~~~~~~~~~~g~t~L~~A~~~~~~~ 125 (237)
T 3b7b_A 49 MEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLS---NGQMDVNCQDDGGWTPMIWATEYKHVD 125 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHT---TTCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh---CCCCCcccCCCCCCCHHHHHHHcCCHH
Confidence 344556777888888665432 345789999999998866 67743 44 344448899999999999999999
Q ss_pred HHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 585 AILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 585 iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
++++|+.+|++++.+|..|+||||+|+..|+.+++++|+.+|+|...
T Consensus 126 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 172 (237)
T 3b7b_A 126 LVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHA 172 (237)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTC
T ss_pred HHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999988653
No 98
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.28 E-value=1e-11 Score=126.41 Aligned_cols=117 Identities=14% Similarity=0.041 Sum_probs=93.4
Q ss_pred ccccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHH
Q 006569 511 KSTCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTW 584 (640)
Q Consensus 511 k~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~ 584 (640)
...|+..+..++++.+.+.+.. ...+.++|+.|+..+++. ++|++ .|++.+..|..|.||||+|+..|+.+
T Consensus 63 L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~---~ga~~~~~~~~g~t~L~~A~~~~~~~ 139 (285)
T 3d9h_A 63 MHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLK---HGAQVNGVTADWHTPLFNACVSGSWD 139 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHH---TTCCSSCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHH---CCCCCCCCCCCCCCHHHHHHHcCHHH
Confidence 3445556777888877655332 245789999999988766 67753 46666668999999999999999999
Q ss_pred HHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 585 AILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 585 iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
++++|+.+|++++..+ .|+||||+|+..|+.+++++|+.+|++...
T Consensus 140 ~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 185 (285)
T 3d9h_A 140 CVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDH 185 (285)
T ss_dssp HHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 9999999999998654 499999999999999999999999987644
No 99
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.26 E-value=6.1e-12 Score=138.94 Aligned_cols=92 Identities=17% Similarity=0.131 Sum_probs=80.2
Q ss_pred ccHHHHHHHhCcHH--HHHHHHHhcCCCcccC------CCCCCCHHHHHHH---hCCHHHHHHHHHCCCCcccccCCCCc
Q 006569 537 KDSFFELTLKSKLK--EWLLERVVEGSKTTEY------DVHGQGVIHLCAM---LGYTWAILLFSWSGLSLDFRDKYGWT 605 (640)
Q Consensus 537 ~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~------D~~G~TpLHlAA~---lG~~~iv~lLL~~Gadin~rD~~G~T 605 (640)
.+.|+.|+..+++. +.| +..|.+.+.. |..|.||||+||. .|+.+++++|+.+|+++|.+|..|+|
T Consensus 133 ~~~L~~A~~~g~~~~v~~l---l~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~T 209 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEA---FANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNT 209 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHH---HHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCC
T ss_pred HHHHHHHHhccCHHHHHHH---HhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCc
Confidence 36799999999877 445 3456655444 8899999999966 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 606 ALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 606 pLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
|||+||..|+.++|++||.+|||...
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~~~~ 235 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRALVGT 235 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCCCSC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999998554
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.26 E-value=1.6e-11 Score=116.61 Aligned_cols=107 Identities=14% Similarity=0.068 Sum_probs=81.5
Q ss_pred cHHHHHHHhccC---CCCccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCC-CCCCCHHHHHHHhCCHHHHHHHHH
Q 006569 518 SWAYLFKSVGDK---RTSLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSW 591 (640)
Q Consensus 518 ~w~~ll~~l~~~---~~~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D-~~G~TpLHlAA~lG~~~iv~lLL~ 591 (640)
+..++++.+.++ +.....+.++|+.++..++.. ++|++ .|++.+..| ..|.||||+|+..|+.+++++|+.
T Consensus 55 g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~---~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 131 (183)
T 3deo_A 55 ADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAE---AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVE 131 (183)
T ss_dssp TCHHHHHHHTTTSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH---TTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH---cCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHH
Confidence 334445554431 222345889999999998866 67753 566666676 899999999999999999999999
Q ss_pred CCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhch
Q 006569 592 SGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQIS 627 (640)
Q Consensus 592 ~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~Ga 627 (640)
+|++++.+|..|+||||+|+..++.+.+..++..++
T Consensus 132 ~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~ 167 (183)
T 3deo_A 132 LGADIEVEDERGLTALELAREILKTTPKGNPMQFGR 167 (183)
T ss_dssp HTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHH
T ss_pred cCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHH
Confidence 999999999999999999988755555545544443
No 101
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.26 E-value=1.1e-11 Score=131.32 Aligned_cols=119 Identities=17% Similarity=0.106 Sum_probs=95.2
Q ss_pred ccccccccHHHHHHHhccC-------CCCccccccHHHHHHHhC---cHH--HHHHHHHhcCCCccc--------CCCCC
Q 006569 511 KSTCISNSWAYLFKSVGDK-------RTSLPEAKDSFFELTLKS---KLK--EWLLERVVEGSKTTE--------YDVHG 570 (640)
Q Consensus 511 k~~a~~~~w~~ll~~l~~~-------~~~~~~~~~~L~~a~l~~---~L~--~~Ll~kl~~g~~~~~--------~D~~G 570 (640)
...++..+..++++.+... +.....+.++|+.++..+ .+. ++|++ .|.+.+. .|..|
T Consensus 203 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~---~g~~~~~~~~~~~~~~d~~g 279 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVE---KGAKVDYDGAARKDSEKYKG 279 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHH---HTCCSSCCSGGGTSSSSCCC
T ss_pred HHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHH---CCCCcccccccccCcccccC
Confidence 3344556777888887553 223456889999999876 443 67754 4555432 57789
Q ss_pred CCHHHHHHHhCCHHHHHHHHHCC-CCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhhh
Q 006569 571 QGVIHLCAMLGYTWAILLFSWSG-LSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLVR 632 (640)
Q Consensus 571 ~TpLHlAA~lG~~~iv~lLL~~G-adin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~r 632 (640)
.||||+||..|+.++|++|+.+| +++|.+|..|+||||+|+..|+.++|++||.+|+|...+
T Consensus 280 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~ 342 (373)
T 2fo1_E 280 RTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAV 342 (373)
T ss_dssp CCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCC
T ss_pred CCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCC
Confidence 99999999999999999999876 999999999999999999999999999999999986543
No 102
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.25 E-value=1.4e-11 Score=131.80 Aligned_cols=117 Identities=17% Similarity=0.127 Sum_probs=98.8
Q ss_pred ccccccccHHHHHHHhccCCC----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHH
Q 006569 511 KSTCISNSWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTW 584 (640)
Q Consensus 511 k~~a~~~~w~~ll~~l~~~~~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~ 584 (640)
...|+..+..++++.+.+.+. ....+.++|+.|+..+++. ++|++ .+.+.+.+|..|+||||+||..|+.+
T Consensus 18 L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~---~g~~~~~~~~~g~t~L~~A~~~g~~~ 94 (437)
T 1n11_A 18 LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQ---NKAKVNAKAKDDQTPLHCAARIGHTN 94 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHH---HTCCSSCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh---CCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence 444556788888888865533 2345789999999999866 78854 56677778999999999999999999
Q ss_pred HHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhh
Q 006569 585 AILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 585 iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l 630 (640)
++++|+.+|++++.+|..|+||||+|+..|+.++|++|+.+|++..
T Consensus 95 ~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 140 (437)
T 1n11_A 95 MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQA 140 (437)
T ss_dssp HHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC
T ss_pred HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc
Confidence 9999999999999999999999999999999999999999998643
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.25 E-value=2.8e-11 Score=129.69 Aligned_cols=92 Identities=24% Similarity=0.279 Sum_probs=82.6
Q ss_pred cccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHH
Q 006569 534 PEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (640)
Q Consensus 534 ~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA 611 (640)
..+.++|+.|+..+++. ++|+ ..|++++..|..|.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|+
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL---~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~ 309 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLL---QNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAM 309 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHH---HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHH---HcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHH
Confidence 45789999999998766 6774 357777779999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHhchh
Q 006569 612 YYGRYESSSYHIYQISM 628 (640)
Q Consensus 612 ~~Gh~eiV~lLLs~GaD 628 (640)
..|+.++|++|+..++.
T Consensus 310 ~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 310 ETANADIVTLLRLAKMR 326 (368)
T ss_dssp HTTCHHHHHHHHHHHC-
T ss_pred HCCCHHHHHHHHHcCCC
Confidence 99999999999988743
No 104
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.25 E-value=9.7e-12 Score=128.95 Aligned_cols=93 Identities=17% Similarity=0.145 Sum_probs=80.7
Q ss_pred cccHHHHHHHhCcHH--HHHHHHHhcCCCccc------CCCCCCCHHHHHHHh---CCHHHHHHHHHCCCCcccccCCCC
Q 006569 536 AKDSFFELTLKSKLK--EWLLERVVEGSKTTE------YDVHGQGVIHLCAML---GYTWAILLFSWSGLSLDFRDKYGW 604 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~------~D~~G~TpLHlAA~l---G~~~iv~lLL~~Gadin~rD~~G~ 604 (640)
..++|+.|+..+++. ++| +..|.+.+. .+..|.||||+||.. |+.+++++|+.+|+++|.+|..|+
T Consensus 151 ~~~~L~~A~~~g~~~~v~~l---l~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~ 227 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEA---FANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 227 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHH---HHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCC
T ss_pred hHHHHhhhhhccCHHHHHHH---HhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCC
Confidence 456799999999876 344 345655554 588999999999997 899999999999999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 605 TALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 605 TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
||||+||..|+.++|++||.+|||...
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~gad~~~ 254 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRALVGT 254 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCCSC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 999999999999999999999998544
No 105
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.24 E-value=1e-11 Score=111.77 Aligned_cols=66 Identities=18% Similarity=0.300 Sum_probs=63.2
Q ss_pred cCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhh
Q 006569 565 EYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 565 ~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l 630 (640)
.+|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+|++..
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 70 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN 70 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc
Confidence 578999999999999999999999999999999999999999999999999999999999998654
No 106
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.24 E-value=5.6e-12 Score=110.40 Aligned_cols=67 Identities=19% Similarity=0.106 Sum_probs=61.6
Q ss_pred cCCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 565 EYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 565 ~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+.|.+|.|+||+||..|+.+++++|+..|+++|.+|..|+||||+||..|+.++|++||.+|+|...
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~ 85 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA 85 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 4788999999999999999999999999999999999999999999999999999999999988643
No 107
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.22 E-value=3.6e-11 Score=116.27 Aligned_cols=60 Identities=18% Similarity=0.188 Sum_probs=31.0
Q ss_pred CCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchh
Q 006569 569 HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISM 628 (640)
Q Consensus 569 ~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD 628 (640)
.|.||||+|+..|+.+++++|+..|++++.+|..|+||||+|+..|+.+++++|+.+|++
T Consensus 75 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~ 134 (240)
T 3eu9_A 75 LNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD 134 (240)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC
Confidence 345555555555555555555555555555555555555555555555555555555444
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.22 E-value=1.9e-11 Score=131.05 Aligned_cols=93 Identities=13% Similarity=0.069 Sum_probs=80.7
Q ss_pred cccHHHHHHHh-CcHH--HHHHHHHhcCCCcccCC--CCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHH
Q 006569 536 AKDSFFELTLK-SKLK--EWLLERVVEGSKTTEYD--VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 610 (640)
Q Consensus 536 ~~~~L~~a~l~-~~L~--~~Ll~kl~~g~~~~~~D--~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~A 610 (640)
..+.|+.|+.. +++. ++|+ ..|.+++..+ ..|.||||+||..|+.+++++|+.+|+++|.+|..|+||||+|
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL---~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADAL---AHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHH---HTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHH---HcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 45678888877 6665 4553 4666666666 8999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHhchhhhh
Q 006569 611 AYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 611 A~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+..|+.++|++||.+|||...
T Consensus 276 ~~~g~~~~v~~LL~~Gad~~~ 296 (368)
T 3jue_A 276 TILGHTGLACLFLKRGADLGA 296 (368)
T ss_dssp HHHTCHHHHHHHHHTTCCTTC
T ss_pred HHcCcHHHHHHHHHCcCCCCC
Confidence 999999999999999998654
No 109
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.21 E-value=1.9e-11 Score=108.25 Aligned_cols=99 Identities=17% Similarity=0.112 Sum_probs=77.0
Q ss_pred cccHHHHHHHhccCCC----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCCHHHHHHH
Q 006569 516 SNSWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLF 589 (640)
Q Consensus 516 ~~~w~~ll~~l~~~~~----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~~~iv~lL 589 (640)
..+..++++.+.+.+. ....+.++|+.++..++.. ++|+ ..|.+.+.+|..|.||||+|+..|+.+++++|
T Consensus 16 ~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll---~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~L 92 (123)
T 3aaa_C 16 KNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLL---LKGADINAPDKHHITPLLSAVYEGHVSCVKLL 92 (123)
T ss_dssp HTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHH---TTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHH---HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3444555555543322 2345889999999998866 6774 35666666999999999999999999999999
Q ss_pred HHCCCCcccccCCCCcHHHHHHHcCCHH
Q 006569 590 SWSGLSLDFRDKYGWTALHWAAYYGRYE 617 (640)
Q Consensus 590 L~~Gadin~rD~~G~TpLH~AA~~Gh~e 617 (640)
+.+|++++.+|..|+||||+|+..+..+
T Consensus 93 l~~ga~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 93 LSKGADKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HHTTCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred HHcCCCCCCcCCCCCCHHHHhCCHHHHH
Confidence 9999999999999999999995444433
No 110
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.21 E-value=1.3e-11 Score=119.17 Aligned_cols=94 Identities=11% Similarity=0.010 Sum_probs=81.9
Q ss_pred ccccHHHHHHHhCc------HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHhCC------HHHHHHHHHCCCCcccccCC
Q 006569 535 EAKDSFFELTLKSK------LKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGY------TWAILLFSWSGLSLDFRDKY 602 (640)
Q Consensus 535 ~~~~~L~~a~l~~~------L~~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~------~~iv~lLL~~Gadin~rD~~ 602 (640)
.+.++|+.|+..+. +.++|++ .|++++.+|..|+||||+|+..|+ .+++++|+.+|+++|.+|..
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~---~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~ 113 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLIN---KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKP 113 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHH---TTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGG
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCC
Confidence 48899999988763 8898964 677777799999999999999997 57899999999999999999
Q ss_pred CC-cHHHHHHHcC-----CHHHHHHHHH-hchhhhh
Q 006569 603 GW-TALHWAAYYG-----RYESSSYHIY-QISMQLV 631 (640)
Q Consensus 603 G~-TpLH~AA~~G-----h~eiV~lLLs-~GaD~l~ 631 (640)
|+ ||||+|+..| +.+++++||. +|+|...
T Consensus 114 g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~ 149 (186)
T 3t8k_A 114 YKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI 149 (186)
T ss_dssp GTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC
T ss_pred cCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc
Confidence 99 9999999954 4679999999 9998654
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.20 E-value=7.4e-12 Score=109.37 Aligned_cols=66 Identities=23% Similarity=0.129 Sum_probs=62.9
Q ss_pred CCCCCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhchhhhh
Q 006569 566 YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 566 ~D~~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~GaD~l~ 631 (640)
+|+.|+||||+||..|+.+++++|+.+|++++.+|..|+||||+|+..|+.+++++||.+|++...
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 70 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA 70 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc
Confidence 688999999999999999999999999999999999999999999999999999999999997543
No 112
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.17 E-value=8.5e-11 Score=113.61 Aligned_cols=208 Identities=12% Similarity=0.046 Sum_probs=129.9
Q ss_pred eEEEeCCcccceeeeeCCceeecCCCCCCceeEEEEEeCCCCCcccceeeeecCCC-CCCCCCcccccchhHHHHHH---
Q 006569 401 MFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPISQVLNFEYRSPQ-LHAPVASSEDKSKWEEFQVQ--- 476 (640)
Q Consensus 401 ~~cmFGdveVpaeiiq~GVLrC~~Pph~pG~Vpl~Vt~~n~~~~Sev~~FEYr~~~-l~~~~~~~~~~~~~~e~~Lq--- 476 (640)
+.|..|+.++...+++.|.-.. -...-|..||++++..+. .++..+-..... .... ....+...+++.
T Consensus 15 ~A~~~g~~~~~~~Ll~~g~~~~--~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~~~~~~~~----~~~~~~t~L~~A~~~ 86 (240)
T 3eu9_A 15 KATQYGIYERCRELVEAGYDVR--QPDKENVTLLHWAAINNR--IDLVKYYISKGAIVDQL----GGDLNSTPLHWATRQ 86 (240)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTT--CCCTTSCCHHHHHHHTTC--HHHHHHHHHTTCCTTCC----BTTTTBCHHHHHHHH
T ss_pred HHHHcCChHHHHHHHHcCCCcC--CCCCCCCCHHHHHHHhCC--HHHHHHHHHcCCcchhh----cCCcCCChhHHHHHc
Confidence 5567788887777777774321 123468888888876653 222222111111 1100 011122333333
Q ss_pred --HHHHHHhhccCCCcccccCCCCCCChHHHhhhhcccccccccHHHHHHHhccCCCC----ccccccHHHHHHHhCc--
Q 006569 477 --MRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSK-- 548 (640)
Q Consensus 477 --~Rl~~lL~s~~~~~~ils~~~~~~~~~e~~~~~~k~~a~~~~w~~ll~~l~~~~~~----~~~~~~~L~~a~l~~~-- 548 (640)
..++++|....... +.. +.........++..+..++++.+.+.+.. ...+.++|+.++..+.
T Consensus 87 ~~~~~v~~Ll~~g~~~---------~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~ 156 (240)
T 3eu9_A 87 GHLSMVVQLMKYGADP---------SLI-DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSV 156 (240)
T ss_dssp TCHHHHHHHHHTTCCT---------TCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSS
T ss_pred CCHHHHHHHHHcCCCC---------ccc-CCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChH
Confidence 33444444332221 110 11111122334456677788877554332 3457899999997765
Q ss_pred -HHHHHHHHHhcCCCcccCCC-CCCCHHHHHHHhCCHHHHHHHHHCCCCcccccCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 006569 549 -LKEWLLERVVEGSKTTEYDV-HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRYESSSYHIYQI 626 (640)
Q Consensus 549 -L~~~Ll~kl~~g~~~~~~D~-~G~TpLHlAA~lG~~~iv~lLL~~Gadin~rD~~G~TpLH~AA~~Gh~eiV~lLLs~G 626 (640)
+.++|+ ..+...+..+. .|.||||+|+..|+.+++++|+.+|++++.+|..|+||||+|+..|+.++|++|+.++
T Consensus 157 ~~~~~L~---~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~ 233 (240)
T 3eu9_A 157 DPTRLLL---TFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEAR 233 (240)
T ss_dssp TTHHHHH---HTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHH---hcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhh
Confidence 346664 35666666665 8999999999999999999999999999999999999999999999999999999999
Q ss_pred hhh
Q 006569 627 SMQ 629 (640)
Q Consensus 627 aD~ 629 (640)
++.
T Consensus 234 ~~~ 236 (240)
T 3eu9_A 234 QAK 236 (240)
T ss_dssp ---
T ss_pred hcc
Confidence 875
No 113
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.14 E-value=6.7e-11 Score=123.13 Aligned_cols=113 Identities=14% Similarity=0.046 Sum_probs=91.5
Q ss_pred cccHHHHHHHhccCCC-----CccccccHHHHHHHhCcHH--HHHHHHHhcCCCcccCCCCCCCHHHHHHHhCC---HHH
Q 006569 516 SNSWAYLFKSVGDKRT-----SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKTTEYDVHGQGVIHLCAMLGY---TWA 585 (640)
Q Consensus 516 ~~~w~~ll~~l~~~~~-----~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~~~~D~~G~TpLHlAA~lG~---~~i 585 (640)
.+...++++.+.+.+. ....+.++|+.|+..+++. ++|++ .|++.+.+|..|.||||+||..|+ .++
T Consensus 106 ~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~---~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~ 182 (327)
T 1sw6_A 106 DSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVK---HGSNRLYGDNMGESCLVKAVKSVNNYDSGT 182 (327)
T ss_dssp HHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHH---TTCCTTBCCTTCCCHHHHHHHSSHHHHTTC
T ss_pred HhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH---cCCCCCCcCCCCCCHHHHHHHhcccccHHH
Confidence 3455667776655433 3456899999999999866 77753 576776799999999999999998 577
Q ss_pred HHHHHHCC-CCcccccCCCCcHHHHHHH----cCCHHHHHHHHHhchhhhh
Q 006569 586 ILLFSWSG-LSLDFRDKYGWTALHWAAY----YGRYESSSYHIYQISMQLV 631 (640)
Q Consensus 586 v~lLL~~G-adin~rD~~G~TpLH~AA~----~Gh~eiV~lLLs~GaD~l~ 631 (640)
++.|+..+ ++++.+|..|+||||+||. .|+.++|++|+..+++.+.
T Consensus 183 ~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~ 233 (327)
T 1sw6_A 183 FEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIV 233 (327)
T ss_dssp HHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHh
Confidence 77777776 7899999999999999999 9999999999999765443
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.06 E-value=2e-11 Score=131.10 Aligned_cols=118 Identities=13% Similarity=0.015 Sum_probs=90.5
Q ss_pred cccccccHHHHHHHhccCCC-------CccccccHHHHHHHhCcHH--HHHHHHHhcCCCc---ccCCCCCCCHHHHHHH
Q 006569 512 STCISNSWAYLFKSVGDKRT-------SLPEAKDSFFELTLKSKLK--EWLLERVVEGSKT---TEYDVHGQGVIHLCAM 579 (640)
Q Consensus 512 ~~a~~~~w~~ll~~l~~~~~-------~~~~~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~---~~~D~~G~TpLHlAA~ 579 (640)
..|+..|..++++.+.+.+. ....+.++|+.|+..+++. ++|++ .|++. +..+++ .||||+||.
T Consensus 97 h~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~---~gad~~~~~i~~~~-~TpLh~Aa~ 172 (376)
T 2aja_A 97 FVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCE---LAPTEIMAMIQAEN-YHAFRLAAE 172 (376)
T ss_dssp HHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHH---SCTTTHHHHHSHHH-HHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHh---CCCCccccccCCCC-CCHHHHHHH
Confidence 34556788888888866643 1234677999999999876 77753 44321 112222 899999999
Q ss_pred hCCHHHHHHHHHCCCCccc--ccCCCCcHHHHHH-HcCCHHHHHHHHHhchhhhhhhcc
Q 006569 580 LGYTWAILLFSWSGLSLDF--RDKYGWTALHWAA-YYGRYESSSYHIYQISMQLVRLSL 635 (640)
Q Consensus 580 lG~~~iv~lLL~~Gadin~--rD~~G~TpLH~AA-~~Gh~eiV~lLLs~GaD~l~r~gl 635 (640)
.|+.++|++|+.+|++++. +|..|+||||+|| ..||.++|++|+++|++ .+++|
T Consensus 173 ~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~--~~taL 229 (376)
T 2aja_A 173 NGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM--LAYAE 229 (376)
T ss_dssp TTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH--HHHHH
T ss_pred CCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc--cchHH
Confidence 9999999999999999988 9999999999999 99999999999998875 44444
No 115
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.91 E-value=3.2e-10 Score=121.80 Aligned_cols=91 Identities=10% Similarity=-0.030 Sum_probs=71.6
Q ss_pred cccHHHHHHHhCcHH--HHHHHHHhcCCCc---ccCCCCCCCHHHHHHHhCCHHHHHHHHHCCCC---cccccCCCCcHH
Q 006569 536 AKDSFFELTLKSKLK--EWLLERVVEGSKT---TEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS---LDFRDKYGWTAL 607 (640)
Q Consensus 536 ~~~~L~~a~l~~~L~--~~Ll~kl~~g~~~---~~~D~~G~TpLHlAA~lG~~~iv~lLL~~Gad---in~rD~~G~TpL 607 (640)
.+++|+.|+..+++. ++|++ .|+.. ...+..|.||||+||..|+.++|++|+.+|++ .+..+.+ +|||
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~---~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCL---LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTT---C--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred cCCHHHHHHHcCCHHHHHHHHH---cCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 569999999999877 67743 34311 13556788999999999999999999999976 2333333 9999
Q ss_pred HHHHHcCCHHHHHHHHHhchhhh
Q 006569 608 HWAAYYGRYESSSYHIYQISMQL 630 (640)
Q Consensus 608 H~AA~~Gh~eiV~lLLs~GaD~l 630 (640)
|+||..||.++|++|+++|+|..
T Consensus 168 h~Aa~~G~~eiv~~Ll~~ga~~~ 190 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELAPTEA 190 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCGGGH
T ss_pred HHHHHCCCHHHHHHHHHcCCccc
Confidence 99999999999999999999854
No 116
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A
Probab=98.88 E-value=3.5e-09 Score=97.14 Aligned_cols=84 Identities=20% Similarity=0.309 Sum_probs=75.5
Q ss_pred cceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCC-CceeEEEEEeCCCC
Q 006569 364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS-PGLFLLYMSLDGHK 442 (640)
Q Consensus 364 lfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~-pG~Vpl~Vt~~n~~ 442 (640)
.+.|+.++|+.|...||+.|+|.|..|.+ +..|+||+..+=.+.+.+..+||++||+. ||.|.+.++..++.
T Consensus 5 ~P~I~~i~P~eG~~~GG~~V~I~G~nF~~-------GlqV~FG~t~~w~e~itphairv~~PP~~~pG~V~VTl~~k~kq 77 (138)
T 3muj_A 5 TPCIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQ 77 (138)
T ss_dssp CCEEEEEESSEEETTCCCEEEEEEESCCT-------TCEEEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETTEE
T ss_pred CCceeEecCCCCCccCCeEEEEeCCCccc-------CCEEEECCeeeeeeeecccceEEECCCCCCCCceEEEEeecCcc
Confidence 36899999999999999999999998766 68999999999999999999999999866 99999999988887
Q ss_pred Cccc-ceeeeecC
Q 006569 443 PISQ-VLNFEYRS 454 (640)
Q Consensus 443 ~~Se-v~~FEYr~ 454 (640)
.|.. ...|.|..
T Consensus 78 f~~g~p~~F~Y~~ 90 (138)
T 3muj_A 78 FCKGAPGRFVYTA 90 (138)
T ss_dssp ECTTSCEEEEEEC
T ss_pred cccCCCceEEEec
Confidence 7754 47899985
No 117
>3mlp_A Transcription factor COE1; transcription factor, pseudo-IG-fold, TIG-domain, IPT-domain loop-helix; HET: DNA CIT; 2.80A {Mus musculus} PDB: 3n50_A
Probab=98.55 E-value=1.7e-07 Score=97.29 Aligned_cols=84 Identities=19% Similarity=0.308 Sum_probs=75.2
Q ss_pred cceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCC-CceeEEEEEeCCCC
Q 006569 364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS-PGLFLLYMSLDGHK 442 (640)
Q Consensus 364 lfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~-pG~Vpl~Vt~~n~~ 442 (640)
.+.|+-++|..|+..||+.|+|.|..|.+ +..|+||..+|-.+++.+..|||++||+. ||.|.+.+.-.++.
T Consensus 231 tP~IkaIsPnEG~~tGG~tV~IiGenFf~-------GLQVvFGtt~vWselITphAIRV~tPPr~~PGvVdVTLs~ksKq 303 (402)
T 3mlp_A 231 TPCIKAISPSEGWTTGGATVIIIGDNFFD-------GLQVIFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQ 303 (402)
T ss_dssp CCEEEECSSCEECTTCCCEEEEEEECCCT-------TCEEEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETTEE
T ss_pred CcceEEecCCCCCccCCeEEEEeCCCccc-------CCEEEEccEeeeeEEecccceEEECCCCCCCCceEEEEEecCcc
Confidence 46999999999999999999999998866 68999999999999999999999999966 99999999988887
Q ss_pred Ccc-cceeeeecC
Q 006569 443 PIS-QVLNFEYRS 454 (640)
Q Consensus 443 ~~S-ev~~FEYr~ 454 (640)
.|- .+..|.|..
T Consensus 304 f~kg~pgrF~YtA 316 (402)
T 3mlp_A 304 FCKGTPGRFIYTA 316 (402)
T ss_dssp ESTTSCEEEEEC-
T ss_pred cccCCCCceeeec
Confidence 774 357899886
No 118
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=98.06 E-value=9.3e-06 Score=71.29 Aligned_cols=84 Identities=18% Similarity=0.181 Sum_probs=62.2
Q ss_pred cceeEEecCCCccCCCCeEEEEECCCCCCccccCCcc-eEEEeCCccc-c-eeeeeCCceeecCCCCC--CceeEEEEEe
Q 006569 364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSN-MFCVCGEVRV-P-AEFVQAGVYRCFLPPHS--PGLFLLYMSL 438 (640)
Q Consensus 364 lfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~-~~cmFGdveV-p-aeiiq~GVLrC~~Pph~--pG~Vpl~Vt~ 438 (640)
.+.|++|+|..|+. ||+|+|.|+.|... .+. ..+.+|+++- + ++......|.|.++|+. .|.|.++|..
T Consensus 7 ~P~It~i~P~~Gp~--GT~vTI~G~nlg~~----~sdv~~V~vgg~~C~~~~~~~s~~~IvC~~~~~~~~~g~V~V~v~~ 80 (99)
T 1uad_C 7 PPLVTGISPNEGIP--WTKVTIRGENLGTG----PTDLIGLTICGHNCLLTAEWMSASKIVCRVGQAKNDKGDIIVTTKS 80 (99)
T ss_dssp CCEEEEEESSEEST--TCEEEEEEECSCSS----GGGEEEEEETTEECGGGCEEEETTEEEEECCCCSSSSCCEEEEETT
T ss_pred CCEEEEEECCCcCC--CCEEEEEEEeCCCC----cccceEEEECCEEceEeeceeecCEEEEEeCCCCCcceeEEEEECC
Confidence 57999999999988 79999999988663 112 4699999742 2 46788899999999887 5666666632
Q ss_pred CCCCCcccceeeeecCC
Q 006569 439 DGHKPISQVLNFEYRSP 455 (640)
Q Consensus 439 ~n~~~~Sev~~FEYr~~ 455 (640)
++.+-|. ..|+|.++
T Consensus 81 -~~~~~s~-~~F~y~~P 95 (99)
T 1uad_C 81 -GGRGTST-VSFKLLKP 95 (99)
T ss_dssp -TEECEES-SCCEECCC
T ss_pred -CCcEEec-ceEEEeCc
Confidence 2234454 38999864
No 119
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.86 E-value=2.6e-05 Score=84.63 Aligned_cols=88 Identities=18% Similarity=0.166 Sum_probs=72.3
Q ss_pred CCccceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCCC-ceeEEEEEeC
Q 006569 361 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSP-GLFLLYMSLD 439 (640)
Q Consensus 361 q~qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~p-G~Vpl~Vt~~ 439 (640)
..+...|++|+|..|. .||+|+|.|+.|... .....++||+.+.....+.+..|.|.+|.+++ |.+++.|...
T Consensus 14 ~~~p~~i~~~~P~~g~--~~~~~~i~G~nfg~~----~~~~~v~~~~~~~~v~~~~~~~i~~~vp~~~~~g~~~v~~~~~ 87 (430)
T 3tc9_A 14 PNKPVVISEFSPKEGG--LGTRMLLYGENFGSD----ISKIKVTIGGQDSKVVGAKGKSLYCVVPAKAYDGDIKLSILND 87 (430)
T ss_dssp TTSCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEEECT
T ss_pred CCCCCEEEEEcCCCCC--CCCEEEEEEEcCCCC----ccceEEEECCEEEEEEEECCCEEEEEeCCCCCCccEEEEEecC
Confidence 3456699999999999 799999999988762 35789999998877777899999999999998 9999999877
Q ss_pred CCC----CcccceeeeecCC
Q 006569 440 GHK----PISQVLNFEYRSP 455 (640)
Q Consensus 440 n~~----~~Sev~~FEYr~~ 455 (640)
++. +.+ ...|+|..+
T Consensus 88 ~~~~~~~~~~-~~~F~y~~~ 106 (430)
T 3tc9_A 88 EGEEIANTEA-NEKFVYQKK 106 (430)
T ss_dssp TSCEEEEEEC-SSCCEECCC
T ss_pred CcceeeEEEE-eeEEEEEEE
Confidence 643 222 467998864
No 120
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.67 E-value=4.7e-05 Score=84.66 Aligned_cols=88 Identities=18% Similarity=0.216 Sum_probs=69.9
Q ss_pred CCccceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCCC-ceeEEEEEeC
Q 006569 361 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSP-GLFLLYMSLD 439 (640)
Q Consensus 361 q~qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~p-G~Vpl~Vt~~ 439 (640)
+.|...|++|+|..|.. ||+|+|+|+.|... .+...|+||+++....-+.+..|.|.+|.|+. |.+++.|...
T Consensus 14 p~~p~~i~~~~P~~G~~--~t~~~I~G~nFg~d----~~~i~V~~~~~~a~v~~~~~~~i~~~vp~~~~~G~~~v~v~~~ 87 (496)
T 3kya_A 14 PSKPVAISDFTPKEGGA--YQKLLIYGENFGTD----VSKVKVKIGGKDAIVINVKSTYVYCFVPSGAFSGEIEITVGEG 87 (496)
T ss_dssp TTSCCEEEEEECSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEESCG
T ss_pred CCCCcEEEEEcCCCCCC--CCEEEEEeecCCCC----cceeEEEECCEEEEEEEECCCEEEEEECCCCCCCcEEEEEEec
Confidence 35566999999999998 79999999988762 35799999996665555679999999999997 9999999765
Q ss_pred CC--CCcccceeeeecCC
Q 006569 440 GH--KPISQVLNFEYRSP 455 (640)
Q Consensus 440 n~--~~~Sev~~FEYr~~ 455 (640)
.+ .+.+ -..|+|..+
T Consensus 88 ~~~~~~~~-~~~F~Y~~~ 104 (496)
T 3kya_A 88 ENAVTTTA-STTFSYEKK 104 (496)
T ss_dssp GGCEEEEC-SSCCEECCC
T ss_pred CCceEEEe-cceEEEEEE
Confidence 53 2333 378999763
No 121
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.60 E-value=8.5e-05 Score=79.76 Aligned_cols=88 Identities=17% Similarity=0.226 Sum_probs=69.9
Q ss_pred CCccceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCC----cccceeeeeCCceeecCCCCCCceeEEEE
Q 006569 361 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE----VRVPAEFVQAGVYRCFLPPHSPGLFLLYM 436 (640)
Q Consensus 361 q~qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd----veVpaeiiq~GVLrC~~Pph~pG~Vpl~V 436 (640)
..+...|++|+|..|. .|+||+|.|+.|... .+...++||+ .+....-+....|.|++|.+.+|.+++.|
T Consensus 14 ~~~~~~~~~~~p~~g~--~~~~~~i~g~nfg~~----~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~vp~~~~g~~~i~v 87 (409)
T 3hrp_A 14 PNQPVTVESFMPVEGK--LREKVIVKGSNFGTD----KSKVKVYFVDEAAERLSTVIGIDNNTLYCLAPRQLPGGNRIKV 87 (409)
T ss_dssp TTSCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEEECSSCEEEEEEEEEETTEEEEECCSCCSEEEEEEE
T ss_pred CCCCcEEEEEcCCCCC--CCcEEEEEeEcCCCC----ccceEEEECCcccceEEEEEEECCCEEEEEECCCCCCcEEEEE
Confidence 3556699999999988 799999999988762 3578999999 55554456788999999999999999999
Q ss_pred EeCCCCCcccceeeeecCC
Q 006569 437 SLDGHKPISQVLNFEYRSP 455 (640)
Q Consensus 437 t~~n~~~~Sev~~FEYr~~ 455 (640)
.-.+..+.+ -..|.|..+
T Consensus 88 ~~~~~~~~~-~~~F~y~~~ 105 (409)
T 3hrp_A 88 IVDGKEVTT-DGTFKYEQA 105 (409)
T ss_dssp EETTEEEEC-SSCEEECCC
T ss_pred EECCeeEEE-eeeEEEecc
Confidence 877764322 356888763
No 122
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=97.45 E-value=9.3e-05 Score=85.92 Aligned_cols=95 Identities=16% Similarity=0.177 Sum_probs=61.9
Q ss_pred ccceeEEecCCCccCCCCeEEEEECCCCCCccc--cCCcceEEEeCCcccce--eeeeCCceeecCCCCCCceeEEEEEe
Q 006569 363 HLFSITDVSPAWAFSNEKTKILVTGFFHKDCLH--LSKSNMFCVCGEVRVPA--EFVQAGVYRCFLPPHSPGLFLLYMSL 438 (640)
Q Consensus 363 qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~--~~~~~~~cmFGdveVpa--eiiq~GVLrC~~Pph~pG~Vpl~Vt~ 438 (640)
..+.|+.|+|..|+..|||.|+|+|..|..... .......|.||+++... +.+....|.|.+||..+|.+++.|+-
T Consensus 540 ~~P~ItsI~P~~Gp~~GGT~vTI~G~nf~~~~~~~~~~~~~~V~igg~~C~~~~~~~s~t~I~C~tp~~~~~~~~v~V~v 619 (727)
T 2uzx_B 540 CLPAIYKVFPNSAPLEGGTRLTICGWDFGFRRNNKFDLKKTRVLLGNESCTLTLSESTMNTLKCTVGPAMNKHFNMSIII 619 (727)
T ss_dssp CCCEEEEEESSBCCSSCCCEEEEEEECCCEEETTEEESTTCEEEETTEECEECGGGCCSSEEEEECCC-----CCCEEEE
T ss_pred eCCEEeccCCCcccCCCCEEEEEEEecCCCCcccccCCcccEEEECCCccceeeeeccCCEEEEEeCCCCCCCccEEEEE
Confidence 357999999999999999999999998874210 00235789999974322 24567889999999875554444444
Q ss_pred CCCCCcccceeeeecCCCC
Q 006569 439 DGHKPISQVLNFEYRSPQL 457 (640)
Q Consensus 439 ~n~~~~Sev~~FEYr~~~l 457 (640)
.++...+....|+|.+|.+
T Consensus 620 ~~~~~~~~~~~FtY~~P~I 638 (727)
T 2uzx_B 620 SNGHGTTQYSTFSYVDPVI 638 (727)
T ss_dssp ECSSCEEEEECCBCCCC--
T ss_pred eCCcceeccccccccccee
Confidence 4333234456799986543
No 123
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.33 E-value=0.00035 Score=75.87 Aligned_cols=89 Identities=16% Similarity=0.155 Sum_probs=69.7
Q ss_pred CCccceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCCC-ceeEEEEEeC
Q 006569 361 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSP-GLFLLYMSLD 439 (640)
Q Consensus 361 q~qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~p-G~Vpl~Vt~~ 439 (640)
+.+...|++|+|..|.. ||||+|.|..|... .....++||+.+....-+....|.|.+|+.+. |.|.+.|..+
T Consensus 16 ~~~p~~i~~~~P~~g~~--~~~~~i~G~nfg~~----~~~~~v~~~~~~a~v~~~~~~~i~~~vp~~~~~g~~~v~v~~~ 89 (433)
T 4hw6_A 16 PKEEIVVEKFLPTEGRK--GTRVVVYGRNFGND----VSKVKVTIGGYPAKVINVKGESLLCICPSKAYEGDVKVSVVGD 89 (433)
T ss_dssp TTSCCEEEEEESSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEEEEEEECSSEEEEECCTTCTTCCEEEEEECT
T ss_pred CCCCCEEEEECCCCCCC--CCEEEEEeECCCCC----cceeEEEECCEEEEEEEeCCCEEEEEeCCCCCCCCEEEEEecC
Confidence 34556999999999987 99999999988762 35789999997766556778899999999995 9999999876
Q ss_pred CCC---CcccceeeeecCC
Q 006569 440 GHK---PISQVLNFEYRSP 455 (640)
Q Consensus 440 n~~---~~Sev~~FEYr~~ 455 (640)
+.. ...--..|+|..+
T Consensus 90 ~~~~~~~~~~~~~F~y~~~ 108 (433)
T 4hw6_A 90 DEAELKSGVCEAKFDYQYN 108 (433)
T ss_dssp TSCEEEEEECSSCCEECCC
T ss_pred CcceeeEEEeeeEEEEEee
Confidence 642 1122367888763
No 124
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=97.22 E-value=4.9e-05 Score=88.21 Aligned_cols=74 Identities=18% Similarity=0.272 Sum_probs=1.3
Q ss_pred cceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCC-CceeEEEEEeCCCC
Q 006569 364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS-PGLFLLYMSLDGHK 442 (640)
Q Consensus 364 lfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~-pG~Vpl~Vt~~n~~ 442 (640)
.++|+.|+|.+|+..|||.|+|+|+.|.. .....|.||+.+.....+.+..++|.+|++. +|.|+|.|+-++..
T Consensus 635 ~P~I~sisP~~G~~sGGt~ITI~G~nf~~-----~~~~~V~ig~~~C~i~~~s~t~I~C~tP~~~~~g~~~V~V~idg~~ 709 (727)
T 2uzx_B 635 DPVITSISPKYGPMAGGTLLTLTGNYLNS-----GNSRHISIGGKTCTLKSVSNSILECYTPAQTISTEFAVKLKIDLAN 709 (727)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred cceeEEECCCccccCCCEEEEEEEECCCC-----CCceEEEECCEEeeEEeecCCEEEEEcCCCCCCceEEEEEEECCEE
Confidence 56899999999999999999999999876 2357789999866666788999999999987 89999999987764
No 125
>2yrp_A Nuclear factor of activated T-cells, cytoplasmic 4; beta-sandwich, immunoglobulin-like fold, TIG domain, IPT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.83 E-value=0.0038 Score=55.98 Aligned_cols=86 Identities=16% Similarity=0.166 Sum_probs=64.9
Q ss_pred CCccceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCC------------cccceeeeeCCceeecCCC-C
Q 006569 361 PEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE------------VRVPAEFVQAGVYRCFLPP-H 427 (640)
Q Consensus 361 q~qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd------------veVpaeiiq~GVLrC~~Pp-h 427 (640)
...++.|...|-.-+++.||-+|+++|..+.. .-.++|=+ ..+-+++.+..-|+|.+|| |
T Consensus 5 a~~~P~I~k~s~~s~~v~GG~Ev~Ll~~k~~k-------d~kV~F~E~~~dG~~~WE~~a~f~~d~~~q~aivf~tPpY~ 77 (114)
T 2yrp_A 5 SSGLPQVEAYSPSACSVRGGEELVLTGSNFLP-------DSKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPEYS 77 (114)
T ss_dssp CCSCCEEEEEESSCEETTCCSEEEEEEESCCT-------TCEEEEECBCTTSCBCCCCBCCBCTTTCBTTEEEEECCCCS
T ss_pred CCCCCEEEEecCcccccCCCCEEEEEecccCC-------CCEEEEEEECCCCCcceEEeeEEChHHcccccEEEecCCCC
Confidence 34588999999999999999999999995532 12344422 1122466778899999998 3
Q ss_pred C-----CceeEEEEEeCCCCCcccceeeeecC
Q 006569 428 S-----PGLFLLYMSLDGHKPISQVLNFEYRS 454 (640)
Q Consensus 428 ~-----pG~Vpl~Vt~~n~~~~Sev~~FEYr~ 454 (640)
. |=.|.||+ |.+...+|+...|+|..
T Consensus 78 ~~~I~~pV~V~~~l-~~~~rk~Se~~~FtY~P 108 (114)
T 2yrp_A 78 NKRVSRPVQVYFYV-SNGRRKRSPTQSFRFLP 108 (114)
T ss_dssp CCSCSSCEEEEEEE-ECSSSCBCCCEEEEEEC
T ss_pred CCccCCCeEEEEEE-CCCCCcccCCcCcEEec
Confidence 3 78889999 55545689999999986
No 126
>1ikn_C P50D, protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Mus musculus} SCOP: b.1.18.1
Probab=94.83 E-value=0.087 Score=47.54 Aligned_cols=89 Identities=11% Similarity=0.094 Sum_probs=61.5
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCC-Ccccc-----C--CcceEEEeCCcccceeeeeCCceeecCCC-CC-----Cc
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHK-DCLHL-----S--KSNMFCVCGEVRVPAEFVQAGVYRCFLPP-HS-----PG 430 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~-~~~~~-----~--~~~~~cmFGdveVpaeiiq~GVLrC~~Pp-h~-----pG 430 (640)
..|...|=.-|++.||.+|+++|..+. +.-.+ . +..| -+||++. ++.+....-|+|.+|| |. |=
T Consensus 4 l~I~r~s~~s~~v~GG~Ev~Llc~kv~K~dikV~F~e~~~~g~~W-E~~~~f~-~~dvh~Q~aIvf~tPpY~~~~I~~pV 81 (119)
T 1ikn_C 4 LKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVW-EGFGDFS-PTDVHRQFAIVFKTPKYKDVNITKPA 81 (119)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCTTSEEEEEEEECTTSCEE-EEECCCC-GGGEETTTEEEEECCCCSCTTCSSCE
T ss_pred CEEEEeeCCccccCCCCEEEEEeccccCCCCEEEEEEeCCCCCce-EEeEEeC-hhhccccceEEEECCCCCCCCcCCCE
Confidence 479999999999999999999999543 21000 0 0112 1233321 4556667889999998 33 67
Q ss_pred eeEEEEEeCCCCCcccceeeeecCC
Q 006569 431 LFLLYMSLDGHKPISQVLNFEYRSP 455 (640)
Q Consensus 431 ~Vpl~Vt~~n~~~~Sev~~FEYr~~ 455 (640)
.|.|++.......+|+...|+|...
T Consensus 82 ~V~i~L~r~sd~~~Sep~~FtY~P~ 106 (119)
T 1ikn_C 82 SVFVQLRRKSDLETSEPKPFLYYPE 106 (119)
T ss_dssp EEEEEEEETTTCCBCCCEEEEEECC
T ss_pred EEEEEEEcCCCCCccCCcccEeecC
Confidence 7788887644446899999999973
No 127
>1u36_A DNA-binding, nuclear factor NF-kappa-B P105 subunit; transcription factor, NF-KB, dimerization domain, intertwined folding; 1.89A {Mus musculus} SCOP: b.1.18.1 PDB: 1u3z_A 1u3y_A 3jv4_B 1bfs_A 1u3j_A 1u42_A 1u41_A 1nfi_B
Probab=93.90 E-value=0.17 Score=44.76 Aligned_cols=83 Identities=12% Similarity=0.076 Sum_probs=59.7
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCCC-CccccCCcceEEEeCCc-------c----c-ceeeeeCCceeecCCC-CC--
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFHK-DCLHLSKSNMFCVCGEV-------R----V-PAEFVQAGVYRCFLPP-HS-- 428 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~~-~~~~~~~~~~~cmFGdv-------e----V-paeiiq~GVLrC~~Pp-h~-- 428 (640)
..|...|=.-|++.||.+|.++|..+. + .-.+.|=+. | + ++.+....-++|.+|| |.
T Consensus 4 l~I~r~s~~s~~v~GG~Ev~Llc~kv~K~-------dikV~F~E~~~~g~~WE~~~~f~~~dvh~Q~aIvf~tPpY~~~~ 76 (106)
T 1u36_A 4 LKIVRMDRTAGCVTGGEEIWLLCDKVQKD-------DIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAICFKTPKYKDVN 76 (106)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCTT-------SCEEEEEECC----CEEEECBCCGGGEETTTEEEEECCCCSCTT
T ss_pred CEEEEeeCCccccCCCCEEEEEeccccCC-------CCEEEEEEeCCCCCceEEeeecCHHHcccceEEEEECCCCCCCc
Confidence 479999999999999999999999543 2 122333221 1 1 3456667889999998 33
Q ss_pred ---CceeEEEEEeCCCCCcccceeeeecC
Q 006569 429 ---PGLFLLYMSLDGHKPISQVLNFEYRS 454 (640)
Q Consensus 429 ---pG~Vpl~Vt~~n~~~~Sev~~FEYr~ 454 (640)
|=.|.|++.......+|++..|+|..
T Consensus 77 I~~pV~V~~~l~r~sd~~~Sep~~FtY~P 105 (106)
T 1u36_A 77 ITKPASVFVQLRRKSDLETSEPKPFLYYP 105 (106)
T ss_dssp CSSCEEEEEEEECTTTCCBCCCEEEEEEC
T ss_pred cCCCEEEEEEEEcCCCCCccCCcCcEEcC
Confidence 66777777764444689999999974
No 128
>1my7_A NF-kappab P65 (RELA) subunit; immunoglobulin, IG, beta-sandwich, beta-sheet, homodimerdna- binding, transcription regulation, activator; 1.49A {Mus musculus} SCOP: b.1.18.1 PDB: 1my5_A 1bft_A
Probab=93.02 E-value=0.24 Score=44.36 Aligned_cols=88 Identities=14% Similarity=0.131 Sum_probs=62.4
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCC-CCccccC--CcceEEEeCCcccceeeeeCCceeecCCC-CC-----CceeEEE
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFH-KDCLHLS--KSNMFCVCGEVRVPAEFVQAGVYRCFLPP-HS-----PGLFLLY 435 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~-~~~~~~~--~~~~~cmFGdveVpaeiiq~GVLrC~~Pp-h~-----pG~Vpl~ 435 (640)
..|...|=.-|++.||.+|.++|..+ ++--.+- ...|. +||++. |+++.....++|.+|| |. |=.|-++
T Consensus 4 L~I~r~s~~sg~v~GG~Ev~LLc~kv~K~Di~VrF~e~~WE-~~g~f~-~~Dvh~Q~aIvfktPpY~~~~I~~pV~V~i~ 81 (114)
T 1my7_A 4 LKICRVNRRSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWE-ARGSFS-QADVHRQVAIVFRTPPYADPSLQAPVRVSMQ 81 (114)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCTTSCEEEEEETTEE-EECBCC-GGGBCTTSEEEEECCCCSCTTCCSCEEEEEE
T ss_pred cEEEEecCCceecCCCcEEEEEecccccCCCEEEEEccCeE-EecccC-hhhcccceeEEEECCCCCCCccCCCEEEEEE
Confidence 47999999999999999999999844 3210000 11342 344432 4677788899999998 33 6677777
Q ss_pred EEeCCCCCcccceeeeecC
Q 006569 436 MSLDGHKPISQVLNFEYRS 454 (640)
Q Consensus 436 Vt~~n~~~~Sev~~FEYr~ 454 (640)
+..-....+|++..|+|..
T Consensus 82 L~r~sd~~~Sep~~FtY~P 100 (114)
T 1my7_A 82 LRRPSDRELSEPMEFQYLP 100 (114)
T ss_dssp EEETTTTEECCCEEEEEEC
T ss_pred EEeCCCCCcCCCcccEEec
Confidence 7663334789999999997
No 129
>1zk9_A Transcription factor RELB; NF-KB, transcription factors, intertwined dimer; 2.18A {Mus musculus} PDB: 1zka_A 3jv6_A 3jv4_A 3jss_A 3juz_A 3jv0_A
Probab=92.55 E-value=0.087 Score=46.88 Aligned_cols=89 Identities=11% Similarity=0.090 Sum_probs=62.3
Q ss_pred cceeEEecCCCccCCCCeEEEEECC-CCCCccccC--CcceEEEeCCcccceeeeeCCceeecCCC-CC-----CceeEE
Q 006569 364 LFSITDVSPAWAFSNEKTKILVTGF-FHKDCLHLS--KSNMFCVCGEVRVPAEFVQAGVYRCFLPP-HS-----PGLFLL 434 (640)
Q Consensus 364 lfsI~d~SP~w~~~~ggtKVlI~G~-f~~~~~~~~--~~~~~cmFGdveVpaeiiq~GVLrC~~Pp-h~-----pG~Vpl 434 (640)
...|...|=.-|++.||.+|.++|. |.++--.+- .-.|.. ||++ .++++.....++|.+|| |. |=.|.+
T Consensus 12 ~L~I~r~s~~sg~v~GG~Ev~LLc~kv~K~Di~V~F~e~~WE~-~~~f-~~~Dvh~Q~aIvf~tPpY~~~~I~~pV~V~i 89 (110)
T 1zk9_A 12 ELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSTASWEG-RADF-SQADVHRQIAIVFKTPPYEDLEISEPVTVNV 89 (110)
T ss_dssp TSCEEEESCSCCCTTCCCCCCEEESCCCTTSCCCEEEETTEEE-ECCC-CGGGCCCCCCCCCCCCCCSCTTCSSCEEEEE
T ss_pred CCEEEEecCCccccCCCCEEEEEecccccCCcEEEEechheee-cccc-CcccccccceEEEECCCCCCcccCCCeEEEE
Confidence 4689999999999999999999998 444211000 113432 4543 25677888899999998 33 556667
Q ss_pred EEEeCCCCCcccceeeeecC
Q 006569 435 YMSLDGHKPISQVLNFEYRS 454 (640)
Q Consensus 435 ~Vt~~n~~~~Sev~~FEYr~ 454 (640)
++..-....+||...|+|..
T Consensus 90 ~L~r~sd~~~Sep~~FtY~P 109 (110)
T 1zk9_A 90 FLQRLTDGVCSEPLPFTYLP 109 (110)
T ss_dssp CCBCTTTCCBCCCEEEEECC
T ss_pred EEEeCCCCCccCCcCcEEcC
Confidence 77653444699999999974
No 130
>1oy3_C Transcription factor P65; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: b.1.18.1 PDB: 1k3z_A
Probab=91.32 E-value=0.47 Score=43.60 Aligned_cols=88 Identities=14% Similarity=0.132 Sum_probs=61.6
Q ss_pred ceeEEecCCCccCCCCeEEEEECCCC-CCccccC--CcceEEEeCCcccceeeeeCCceeecCCC-CC-----CceeEEE
Q 006569 365 FSITDVSPAWAFSNEKTKILVTGFFH-KDCLHLS--KSNMFCVCGEVRVPAEFVQAGVYRCFLPP-HS-----PGLFLLY 435 (640)
Q Consensus 365 fsI~d~SP~w~~~~ggtKVlI~G~f~-~~~~~~~--~~~~~cmFGdveVpaeiiq~GVLrC~~Pp-h~-----pG~Vpl~ 435 (640)
..|...|=.-|++.||.+|.++|.-. ++--.+. ...|. .||++. |+++.....++|.+|| |. |=.|-++
T Consensus 4 L~I~r~s~~sg~v~GG~Ev~LLceKv~K~Di~VrF~e~~WE-~~g~f~-~~dVh~Q~AIvfkTPpY~~~~I~~pV~V~iq 81 (136)
T 1oy3_C 4 LKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWE-ARGSFS-QADVHRQVAIVFRTPPYADPSLQAPVRVSMQ 81 (136)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESCCCTTSCEEEEEETTEE-EECBCC-GGGBCTTSEEEEECCCCSCTTCCSCEEEEEE
T ss_pred cEEEEecCCccccCCCcEEEEEccccccCCCEEEEEccCeE-EecccC-hhheecceEEEEECCCCCCccCCCCeEEEEE
Confidence 47999999999999999999999844 3210000 11242 233332 4667778889999998 33 6777788
Q ss_pred EEeCCCCCcccceeeeecC
Q 006569 436 MSLDGHKPISQVLNFEYRS 454 (640)
Q Consensus 436 Vt~~n~~~~Sev~~FEYr~ 454 (640)
+..-....+||...|+|..
T Consensus 82 L~rpsd~~~Sep~~F~Y~P 100 (136)
T 1oy3_C 82 LRRPSDRELSEPMEFQYLP 100 (136)
T ss_dssp EEETTTTEECCCEEEEEEC
T ss_pred EEeCCCCCccCCcceEEec
Confidence 8763444789999999996
No 131
>2v2t_A RELB, transcription factor RELB; 4-diphosphocytidyl-2C-methyl-D-erythritol, aquifex aeolicus, nucleotide-binding, isoprene biosynthesis; 3.05A {Mus musculus} PDB: 3do7_A
Probab=88.95 E-value=0.8 Score=47.21 Aligned_cols=86 Identities=12% Similarity=0.077 Sum_probs=62.7
Q ss_pred ccceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCc--cc-----ceeeeeCCceeecCCC-CC-----C
Q 006569 363 HLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV--RV-----PAEFVQAGVYRCFLPP-HS-----P 429 (640)
Q Consensus 363 qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdv--eV-----paeiiq~GVLrC~~Pp-h~-----p 429 (640)
+...|..+|=.-|++.||.+|.++|..+.- ...-+.|=+. |. ++.+.....++|.+|| |. |
T Consensus 189 ~eL~I~r~s~~sgsv~GG~Ev~LLc~kv~K------~dikV~F~e~~WE~~~~f~~~Dvh~Q~aIvf~tPpY~~~~I~~p 262 (288)
T 2v2t_A 189 SELRICRINKESGPCTGGEELYLLCDKVQK------EDISVVFSTASWEGRADFSQADVHRQIAIVFKTPPYEDLEISEP 262 (288)
T ss_dssp SCCCBCCCSCSCCCSSCCCEEEEEBSSCCT------TSEEEEEECSSCEEECCCCGGGEETTTEEEEECCCCTTCCCSSC
T ss_pred CCCeEEEeeCCccccCCCCEEEEEeccccc------CCCEEEEEecceEEeeEeChhhccceeEEEEECCCCCCCCcCCC
Confidence 345899999999999999999999985431 1244444331 11 4556667789999998 33 7
Q ss_pred ceeEEEEEeCCCCCcccceeeeecC
Q 006569 430 GLFLLYMSLDGHKPISQVLNFEYRS 454 (640)
Q Consensus 430 G~Vpl~Vt~~n~~~~Sev~~FEYr~ 454 (640)
=.|-|++.......|||...|+|..
T Consensus 263 V~V~iqL~r~sd~~~Sep~~FtY~P 287 (288)
T 2v2t_A 263 VTVNVFLQRLTDGVCSEPLPFTYLP 287 (288)
T ss_dssp CBCCEEEEETTTCCBCCCBCCBCCC
T ss_pred eEEEEEEEeCCCCCcCCCcCcEEcC
Confidence 7888888874434799999999974
No 132
>1a3q_A Protein (nuclear factor kappa-B P52); transcription factor, immune response, DNA-protein complex, transcription/DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3 PDB: 3do7_B 3jv6_B 3jv5_A
Probab=88.70 E-value=1.2 Score=45.96 Aligned_cols=88 Identities=14% Similarity=0.158 Sum_probs=60.5
Q ss_pred cceeEEecCCCccCCCCeEEEEECCCCC-Ccc-----ccCCcceEEEeCCcccceeeeeCCceeecCCC-CC-----Cce
Q 006569 364 LFSITDVSPAWAFSNEKTKILVTGFFHK-DCL-----HLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPP-HS-----PGL 431 (640)
Q Consensus 364 lfsI~d~SP~w~~~~ggtKVlI~G~f~~-~~~-----~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pp-h~-----pG~ 431 (640)
...|..+|=.-|++.||.+|.++|..+. +.- +....+| -+||++ -++.+.....++|.+|| +. |=.
T Consensus 185 eL~I~r~s~~sg~v~GG~Ev~Llc~kv~K~Di~V~F~E~~~~gW-E~~~~f-~~~dvh~Q~aIvf~tPpY~~~~I~~pV~ 262 (285)
T 1a3q_A 185 NLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGW-QAFGDF-SPTDVHKQYAIVFRTPPYHKMKIERPVT 262 (285)
T ss_dssp CCCEEEESCSEEETTCCCEEEEEESSCCTTTEEEEEEECSSSCE-EEECBC-CGGGEETTTEEEEECCCCSCTTCSSCEE
T ss_pred CCeEEEecCCccccCCCCEEEEEeccccCCCCEEEEEecCCCCC-EEeeEe-CHHHccceeeEEEECCCCCCCCCCCCeE
Confidence 3489999999999999999999998543 200 0001124 233332 13445557789999998 33 677
Q ss_pred eEEEEEeCCCCCcccceeeeec
Q 006569 432 FLLYMSLDGHKPISQVLNFEYR 453 (640)
Q Consensus 432 Vpl~Vt~~n~~~~Sev~~FEYr 453 (640)
|-|++.......+|++..|+|.
T Consensus 263 V~iqL~r~sd~~~Sep~~FtY~ 284 (285)
T 1a3q_A 263 VFLQLKRKRGGDVSDSKQFTYY 284 (285)
T ss_dssp EEEEEEETTTCCBCCCEEEEEE
T ss_pred EEEEEEeCCCCCccCCCCceeC
Confidence 8888877444479999999996
No 133
>1nfk_A Protein (nuclear factor kappa-B (NF-KB)); NF-KB P50, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA; 2.30A {Mus musculus} SCOP: b.1.18.1 b.2.5.3 PDB: 2v2t_B 1ooa_A 1lei_B* 1le9_B 1le5_B* 2i9t_B 1vkx_B* 3gut_B 2o61_B
Probab=88.40 E-value=1.2 Score=46.58 Aligned_cols=85 Identities=11% Similarity=0.090 Sum_probs=61.7
Q ss_pred cceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEe-------------CCcccceeeeeCCceeecCCC-CC-
Q 006569 364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVC-------------GEVRVPAEFVQAGVYRCFLPP-HS- 428 (640)
Q Consensus 364 lfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmF-------------GdveVpaeiiq~GVLrC~~Pp-h~- 428 (640)
...|..+|-.-|++.||.+|.++|.-+.- ...-+.| |++ -++.+.....++|.+|| |.
T Consensus 209 eL~I~r~s~~sg~v~GG~Ev~LLc~kv~K------~Di~VrF~E~~~~g~~WE~~g~f-~~~Dvh~Q~AIvfkTPpY~~~ 281 (325)
T 1nfk_A 209 NLKIVRMDRTAGCVTGGEEIYLLCDKVQK------DDIQIRFYEEEENGGVWEGFGDF-SPTDVHRQFAIVFKTPKYKDV 281 (325)
T ss_dssp CCCEEEESCSCEESSCCCEEEEEESCCCT------TTEEEEEEECCCSSCCEEEECBC-CGGGBCTTSEEEEECCCTTSS
T ss_pred CCeEEEecCCccccCCCCEEEEEeccccc------CCCEEEEEEeCCCCCeeEEeeee-CHHHccceeEEEEECCCCCCC
Confidence 44899999999999999999999984431 1223333 322 14555567789999998 33
Q ss_pred ----CceeEEEEEeCCCCCcccceeeeecCC
Q 006569 429 ----PGLFLLYMSLDGHKPISQVLNFEYRSP 455 (640)
Q Consensus 429 ----pG~Vpl~Vt~~n~~~~Sev~~FEYr~~ 455 (640)
|=.|-|++.......||++..|+|...
T Consensus 282 ~I~~pV~V~iqL~r~sd~~~Sep~~FtY~P~ 312 (325)
T 1nfk_A 282 NITKPASVFVQLRRKSDLETSEPKPFLYYPE 312 (325)
T ss_dssp CCCSSEEEEEEEEETTTCCBCCCEEEEEECC
T ss_pred CcCCCeEEEEEEEcCCCCCccCCccceeecC
Confidence 677778887644447999999999973
No 134
>3iag_C Recombining binding protein suppressor of hairless; protein-DNA complex, signaling, transcription, notch, activator, alternative splicing; HET: XYL; 2.00A {Mus musculus} PDB: 3brg_C* 3nbn_A 2f8x_C 3v79_C*
Probab=87.89 E-value=0.91 Score=48.60 Aligned_cols=67 Identities=18% Similarity=0.235 Sum_probs=56.4
Q ss_pred eEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCC-----------CCceeEEEEEeCCCCCccccee
Q 006569 381 TKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-----------SPGLFLLYMSLDGHKPISQVLN 449 (640)
Q Consensus 381 tKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph-----------~pG~Vpl~Vt~~n~~~~Sev~~ 449 (640)
.-|-|.|..|.. ++.+.||++++-+.+-.+-.|.|.+|+- .|-.||+-+...++..-+--..
T Consensus 343 amlEl~G~nF~~-------~L~VWFG~v~aeT~yR~~e~l~c~vP~~~~~~~~w~~~~~~~~Vpi~LVR~DGviy~t~~t 415 (422)
T 3iag_C 343 AMLELTGQNFTP-------NLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLT 415 (422)
T ss_dssp CEEEEEEESCCT-------TEEEEETTEECCEEEEETTEEEEECCCGGGTSTTCSSCCSCEEEEEEEEETTSEEEEEEEE
T ss_pred eEEEEEccCCCC-------CceEEECCCCceeEEeccceEEEeCCCHHHhccCccccCCceEEEEEEEecCCEEeeCCcc
Confidence 568899998765 6999999999999999999999999982 2678999999888875566678
Q ss_pred eeecC
Q 006569 450 FEYRS 454 (640)
Q Consensus 450 FEYr~ 454 (640)
|+|..
T Consensus 416 fty~p 420 (422)
T 3iag_C 416 FTYTP 420 (422)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 88875
No 135
>2o61_A Transcription factor P65/interferon regulatory FA 7/interferon regulatory factor...; protein-DNA complex, transcription-DNA complex; 2.80A {Homo sapiens}
Probab=86.80 E-value=1.1 Score=50.06 Aligned_cols=86 Identities=12% Similarity=0.082 Sum_probs=62.0
Q ss_pred cceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCC------ccc-ceeeeeCCceeecCCCCC------Cc
Q 006569 364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE------VRV-PAEFVQAGVYRCFLPPHS------PG 430 (640)
Q Consensus 364 lfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd------veV-paeiiq~GVLrC~~Pph~------pG 430 (640)
-..|..+|-.-|++.||.+|.++|..+.- ...-|.|=+ ..+ ++++.....|+|.+||=. |=
T Consensus 176 eL~I~r~s~~sgsv~GG~Ev~LLc~kv~K------~DikVrF~e~~WE~~a~f~~~Dvh~Q~AIvfkTPpY~~~~I~~pV 249 (540)
T 2o61_A 176 ELKICRVNRNSGSCLGGDEIFLLCDKVQK------EDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPV 249 (540)
T ss_dssp CCCEEEESCSEEETTCCCEEEEEESSCBT------TBCEEEEEETTEEEECBCCGGGEETTTEEEEECCCCSSSCCSSCE
T ss_pred CCeEEEecCCccccCCCCeEEEEeccccc------CCcEEEEecccceeccccChhhhcceeeEEEeCCCCCCCCCCCCe
Confidence 34799999999999999999999985432 123333322 122 466777888999999832 66
Q ss_pred eeEEEEEeCCCCCcccceeeeecCC
Q 006569 431 LFLLYMSLDGHKPISQVLNFEYRSP 455 (640)
Q Consensus 431 ~Vpl~Vt~~n~~~~Sev~~FEYr~~ 455 (640)
.|-|++..-....+||+..|+|...
T Consensus 250 ~V~iqL~r~sd~~~Sep~~FtY~P~ 274 (540)
T 2o61_A 250 RVSMQLRRPSDRELSEPMEFQYLPD 274 (540)
T ss_dssp EEEEEEECGGGCCBCCCEEEEEECC
T ss_pred EEEEEEEeCCCCCcCCCcCcEEecC
Confidence 7777777523346899999999973
No 136
>1svc_P Protein (nuclear factor kappa-B (NF-KB)); DNA-binding, transcription regulation, activator, nuclear protein, phosphorylation, repeat, DNA; HET: DNA; 2.60A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3
Probab=86.76 E-value=1.4 Score=46.80 Aligned_cols=86 Identities=10% Similarity=0.047 Sum_probs=61.8
Q ss_pred cceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCc-----------cc-ceeeeeCCceeecCCC-CC--
Q 006569 364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-----------RV-PAEFVQAGVYRCFLPP-HS-- 428 (640)
Q Consensus 364 lfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdv-----------eV-paeiiq~GVLrC~~Pp-h~-- 428 (640)
...|...|-.-|++.||.+|.++|..+.- ...-+.|=+. .+ ++.+.....++|.+|| +.
T Consensus 249 eL~I~R~s~~sgsv~GG~Ev~LLc~Kv~K------~DikVrF~E~~~~g~~WE~~g~f~~~DVH~Q~AIvfkTPpY~~~~ 322 (365)
T 1svc_P 249 NLKIVRMDRTAGCVTGGEEIYLLCDKVQK------DDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDIN 322 (365)
T ss_dssp CCCEEEESCSEEETTCCCEEEEEESSCCG------GGCEEEEEEEETTTEEEEEECBCCGGGEETTTEEEEECCCCSCSC
T ss_pred CCeEEEecCCccccCCCCEEEEEeccccc------CCCEEEEEEeCCCCCeeEEeeeeChHHhcceeeEEEECCCCCCCC
Confidence 45899999999999999999999985431 1223333221 22 4556667789999998 32
Q ss_pred ---CceeEEEEEeCCCCCcccceeeeecCC
Q 006569 429 ---PGLFLLYMSLDGHKPISQVLNFEYRSP 455 (640)
Q Consensus 429 ---pG~Vpl~Vt~~n~~~~Sev~~FEYr~~ 455 (640)
|=.|-|++.......|||...|+|...
T Consensus 323 I~~pV~V~iqL~R~sd~~~Sep~~FtY~P~ 352 (365)
T 1svc_P 323 ITKPASVFVQLRRKSDLETSEPKPFLYYPE 352 (365)
T ss_dssp CSSCEEEEEEEECTTTCCBCCCEEEEEECC
T ss_pred cCCCeEEEEEEEcCCCCCccCCccceeecC
Confidence 677777776643447999999999963
No 137
>3orj_A Sugar-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.16A {Bacteroides ovatus}
Probab=86.41 E-value=1 Score=48.63 Aligned_cols=78 Identities=17% Similarity=0.076 Sum_probs=55.8
Q ss_pred ccceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCC-cccc-eeee--eCCceeecCCCCCC---ceeEEE
Q 006569 363 HLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-VRVP-AEFV--QAGVYRCFLPPHSP---GLFLLY 435 (640)
Q Consensus 363 qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGd-veVp-aeii--q~GVLrC~~Pph~p---G~Vpl~ 435 (640)
..++|+.+||+.+ ..|..|+|+|.+|.. .-.+.||. +++. ...+ ....|+-.+|.-+. |.|.+
T Consensus 112 PaPtITSISpe~~--~aGd~VTItGsNF~~-------iskV~FgG~veaT~~~svs~S~T~ItVtVPaGA~~~sG~ItV- 181 (439)
T 3orj_A 112 AAPSITKISNCMP--NVGEPIIVYGSGLTE-------IAKVVFPGNVVVTEGIISDLDGEYFMVDMPAGVSEEGGSIFV- 181 (439)
T ss_dssp SCCEEEEESCSSC--CTTCEEEEEEECCTT-------CCEEEETTTEEECSSCEECTTSSEEEEECCTTCCTTCBCCEE-
T ss_pred CCCEEEEeCCCCC--CCCCEEEEEccCCCc-------eeEEEECCCeeEEEEEEecCCCCEEEEEecCCCcCCCceEEE-
Confidence 4689999999976 578999999999977 36799985 5554 2233 67889999998665 66654
Q ss_pred EEeCCCCCcccceeeeecC
Q 006569 436 MSLDGHKPISQVLNFEYRS 454 (640)
Q Consensus 436 Vt~~n~~~~Sev~~FEYr~ 454 (640)
...++.+. ..|.|++
T Consensus 182 -vT~~GtA~---S~~~f~d 196 (439)
T 3orj_A 182 -EGSNGGAY---SPAYFNY 196 (439)
T ss_dssp -EETTEEEE---CCSCBTC
T ss_pred -EeCCCcEe---eeEEEcc
Confidence 45555443 3366665
No 138
>1ikn_A P65, protein (NF-kappa-B P65 subunit); transcription factor, IKB/NFKB complex; 2.30A {Mus musculus} SCOP: b.1.18.1 b.2.5.3 PDB: 1nfi_A 2ram_A* 1ram_A* 2i9t_A 1lei_A* 1le9_A 1le5_A* 1vkx_A* 3gut_A
Probab=86.34 E-value=1.6 Score=44.96 Aligned_cols=90 Identities=13% Similarity=0.113 Sum_probs=61.1
Q ss_pred cceeEEecCCCccCCCCeEEEEECCCC-CCccccC--CcceEEEeCCcccceeeeeCCceeecCCC-CC-----CceeEE
Q 006569 364 LFSITDVSPAWAFSNEKTKILVTGFFH-KDCLHLS--KSNMFCVCGEVRVPAEFVQAGVYRCFLPP-HS-----PGLFLL 434 (640)
Q Consensus 364 lfsI~d~SP~w~~~~ggtKVlI~G~f~-~~~~~~~--~~~~~cmFGdveVpaeiiq~GVLrC~~Pp-h~-----pG~Vpl 434 (640)
...|..+|=.-|++.||.+|.++|..+ ++--.+- ...|. +||++ -++.+....-++|.+|| |. |=.|-|
T Consensus 175 eL~I~r~s~~sg~v~GG~Ev~Llc~kv~K~di~V~F~e~~WE-~~~~f-~~~dvh~Q~aIvf~tPpY~~~~I~~pV~V~i 252 (286)
T 1ikn_A 175 ELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWE-ARGSF-SQADVHRQVAIVFRTPPYADPSLQAPVRVSM 252 (286)
T ss_dssp CCCEEEESCSEEETTCCCEEEEEESCCCTTSCEEEEEETTEE-EECBC-CGGGBCTTSEEEEECCCCSCTTCSSCEEEEE
T ss_pred CCeEEEecCCccccCCCCEEEEEecccccCCCEEEEeccceE-Eeeec-CHHHhccceeEEEECCCCCCCCcCCCEEEEE
Confidence 458999999999999999999999855 3210000 01232 23322 13445556789999998 33 667777
Q ss_pred EEEeCCCCCcccceeeeecCC
Q 006569 435 YMSLDGHKPISQVLNFEYRSP 455 (640)
Q Consensus 435 ~Vt~~n~~~~Sev~~FEYr~~ 455 (640)
++.......+||+..|+|...
T Consensus 253 ~L~r~sd~~~Sep~~FtY~P~ 273 (286)
T 1ikn_A 253 QLRRPSDRELSEPMEFQYLPD 273 (286)
T ss_dssp EEECTTTCCBCCCEEEEEECC
T ss_pred EEEeCCCCCcCCCcCcEEecC
Confidence 777633447899999999973
No 139
>1p7h_L Nuclear factor of activated T-cells, cytoplasmic 2; DNA binding protein, transcription regulation, activator, transcription/DNA complex; 2.60A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3 PDB: 2o93_L 1a02_N* 1pzu_B 1owr_M 2as5_N 1s9k_C 3qrf_N 1nfa_A 1a66_A*
Probab=85.59 E-value=1.6 Score=45.02 Aligned_cols=86 Identities=14% Similarity=0.129 Sum_probs=63.7
Q ss_pred ccceeEEecCCCccCCCCeEEEEECCCCCCccccC--------C--cceEEEeCCcccceeeeeCCceeecCCC-CC---
Q 006569 363 HLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLS--------K--SNMFCVCGEVRVPAEFVQAGVYRCFLPP-HS--- 428 (640)
Q Consensus 363 qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~--------~--~~~~cmFGdveVpaeiiq~GVLrC~~Pp-h~--- 428 (640)
.++.|...|-.-|++.||.+|.++|..+.. ++. + ..| -+||++. .++.+..-++|.+|| |.
T Consensus 184 ~~l~I~r~s~~sg~v~GG~Ei~Llc~kv~K--DikVrF~E~~~dg~~~W-e~~g~f~--~dvh~Q~AIvfkTPpY~~~~I 258 (286)
T 1p7h_L 184 ELPMVERQDTDSCLVYGGQQMILTGQNFTS--ESKVVFTEKTTDGQQIW-EMEATVD--KDKSQPNMLFVEIPEYRNKHI 258 (286)
T ss_dssp CCCEEEEESCSEEETTCCCEEEEEEESCCS--SCEEEEEEECSSSCEEE-EEEECBC--TTTCBTTEEEEECCCCSCTTC
T ss_pred CCCeEEEeccccccccCCcEEEEEecccCC--CcEEEEEEECCCCCcce-EEeEEeC--ccccccceEEEECCCCccCcc
Confidence 357999999999999999999999985531 111 1 124 2455543 366777889999998 33
Q ss_pred --CceeEEEEEeCCCCCcccceeeeecC
Q 006569 429 --PGLFLLYMSLDGHKPISQVLNFEYRS 454 (640)
Q Consensus 429 --pG~Vpl~Vt~~n~~~~Sev~~FEYr~ 454 (640)
|=.|-|++...+ ..+||...|+|..
T Consensus 259 ~~pV~V~~~l~r~d-~~~Sep~~FtY~P 285 (286)
T 1p7h_L 259 RTPVKVNFYVINGK-RKRSQPQHFTYHP 285 (286)
T ss_dssp SSCEEEEEEEEETT-TEECCCEEEEEEC
T ss_pred CCCeEEEEEEeCCC-CCcCCCcCceEec
Confidence 778888887764 4799999999973
No 140
>1gji_A C-REL protein, C-REL proto-oncogene protein; NF-KB/DNA complex, transcription factor, C-REL homodimer, transcription/DNA complex; 2.85A {Gallus gallus} SCOP: b.1.18.1 b.2.5.3
Probab=82.06 E-value=2.3 Score=43.59 Aligned_cols=90 Identities=14% Similarity=0.139 Sum_probs=60.6
Q ss_pred ccceeEEecCCCccCCCCeEEEEECCCCC-CccccC--CcceEEEeCCcccceeeeeCCceeecCCCCC-----CceeEE
Q 006569 363 HLFSITDVSPAWAFSNEKTKILVTGFFHK-DCLHLS--KSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS-----PGLFLL 434 (640)
Q Consensus 363 qlfsI~d~SP~w~~~~ggtKVlI~G~f~~-~~~~~~--~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~-----pG~Vpl 434 (640)
....|.+.|=.-|++.||.+|.++|.-+. +--.+- .-.|. +||++ -++.+....-++|.+||=. |=.|-+
T Consensus 177 ~eL~I~r~s~~sg~v~GG~Ev~LLc~kv~K~di~VrF~e~~We-~~~~f-~~~Dvh~Q~AIvf~TPpY~~~I~~pV~V~i 254 (275)
T 1gji_A 177 AELRICRVNKNCGSVKGGDEIFILCDKVQKDDIEVRFVLDNWE-AKGSF-SQADVHRQVAIVFRTPPFLRDITEPITVKM 254 (275)
T ss_dssp SCCCEEEESCSEEETTCCCEEEEEESCCCGGGCEEEEEETTEE-EECBC-CGGGEETTTEEEEECCCCSSCCSSCEEEEE
T ss_pred CCCEEEEeeCCccccCCCCEEEEEecccccCCCEEEEEcccee-ecccc-ChhhhcceeeEEEeCCCCCcCCCCCEEEEE
Confidence 34579999999999999999999998543 200000 00232 23322 1456677788999999833 666777
Q ss_pred EEEeCCCCCcccceeeeecC
Q 006569 435 YMSLDGHKPISQVLNFEYRS 454 (640)
Q Consensus 435 ~Vt~~n~~~~Sev~~FEYr~ 454 (640)
++..-....+||+..|+|..
T Consensus 255 qL~r~sd~~~Sep~~FtY~P 274 (275)
T 1gji_A 255 QLRRPSDQEVSEPMDFRYLP 274 (275)
T ss_dssp EEEEGGGTEECCCEEEEEEC
T ss_pred EEEcCCCCCccCCcCcEEcC
Confidence 77663333599999999974
No 141
>1imh_C NF-AT5, tonebp, nuclear factor of activated T cells 5; beta barrel, protein-DNA complex, double helix, DNA encirclement, transcription/DNA complex; 2.86A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3
Probab=77.66 E-value=4.9 Score=41.20 Aligned_cols=88 Identities=14% Similarity=0.146 Sum_probs=61.2
Q ss_pred ccceeEEecCCCccCCCCeEEEEECCCCCCcccc-------CCcceEEEeCCcccceeeeeCCceeecCCC-CC-----C
Q 006569 363 HLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHL-------SKSNMFCVCGEVRVPAEFVQAGVYRCFLPP-HS-----P 429 (640)
Q Consensus 363 qlfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~-------~~~~~~cmFGdveVpaeiiq~GVLrC~~Pp-h~-----p 429 (640)
-.+.|..+|-.-|++.||.+|.++|..+..--.+ .+..|. +||++. ++ .+....++|.+|| |. |
T Consensus 180 ~~l~I~r~s~~sg~v~GG~Ev~Llc~kv~KdikVrF~E~~~d~~~WE-~~~~f~-~~-dvhQ~aIvf~tPpY~~~~I~~p 256 (281)
T 1imh_C 180 GVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWK-SEAEID-ME-LFHQNHLIVKVPPYHDQHITLP 256 (281)
T ss_dssp CCCEEEEESCCEEETTCCCEEEEEEECCCTTCEEEEESSSCTTCSCE-EEECBC-GG-GCCSSEEEEECCCCSCTTCSSC
T ss_pred CCCeEEEEecCccccCCCcEEEEEeeccCCCcEEEEEEeCCCCCceE-EeEEeC-hh-hcccceEEEECCCCccCccCCC
Confidence 3679999999999999999999999844320000 012453 355543 22 3346789999998 33 7
Q ss_pred ceeEEEEEeCCCCCcccceeeeecC
Q 006569 430 GLFLLYMSLDGHKPISQVLNFEYRS 454 (640)
Q Consensus 430 G~Vpl~Vt~~n~~~~Sev~~FEYr~ 454 (640)
=.|-|++..+ ...+|+...|+|..
T Consensus 257 V~V~iqL~rs-d~~~S~p~~FtY~P 280 (281)
T 1imh_C 257 VSVGIYVVTN-AGRSHDVQPFTYTP 280 (281)
T ss_dssp EEEEEEEEET-TEECCSCEEEEEEC
T ss_pred eEEEEEEEeC-CCCccCCcCceecC
Confidence 7888888764 44689999999974
No 142
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=66.03 E-value=13 Score=42.64 Aligned_cols=86 Identities=15% Similarity=0.189 Sum_probs=54.9
Q ss_pred CccceeEEecCCCccC-CCCeEEEEECCCCCCccccCCcceEEEeCCc-ccceeeeeCCceeecCCCC------CCc---
Q 006569 362 EHLFSITDVSPAWAFS-NEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-RVPAEFVQAGVYRCFLPPH------SPG--- 430 (640)
Q Consensus 362 ~qlfsI~d~SP~w~~~-~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdv-eVpaeiiq~GVLrC~~Pph------~pG--- 430 (640)
.|-..|+ +.|.--.. ...+.|++....+.. +.. +|.|.||+. +.+|.+ ..+.+.|..|+- .+|
T Consensus 526 ~qC~~i~-~~P~~~s~~~~~~~v~l~v~~lP~---l~~-~~~C~fg~~~~~~a~~-~~~~v~C~sP~~~~~p~~p~g~d~ 599 (681)
T 3oky_A 526 SQCMSLE-VHPNSISVSDHSRLLSLVVNDAPN---LSE-GIACAFGNLTEVEGQV-SGSQVICISPGPKDVPVIPLDQDW 599 (681)
T ss_dssp GGCCEEE-EESSEEETTSCSCEEEEEEETCCC---CTT-CEEEEETTTEEEECEE-ETTEEEEECCCTTTSCCCC--CCE
T ss_pred Cccceee-ecCccccccccccEEEEeccCCCC---CCC-CCEEEcCCccccccee-cCCeeEeCCCCHHhCCCCCCCceE
Confidence 5777886 88875554 457788877777754 333 599999996 677765 666778987753 245
Q ss_pred -eeEEEEEeCC-CCCcccceeeeecC
Q 006569 431 -LFLLYMSLDG-HKPISQVLNFEYRS 454 (640)
Q Consensus 431 -~Vpl~Vt~~n-~~~~Sev~~FEYr~ 454 (640)
.|+|++.... +.. --...|.|-+
T Consensus 600 ~~v~l~l~~~~~~~~-~~s~~f~FYd 624 (681)
T 3oky_A 600 FGLELQLRSKETGKI-FVSTEFKFYN 624 (681)
T ss_dssp EEEEEEEEETTTCCE-EEEEEEEEEC
T ss_pred EEEEEEEEeccCCCc-eeEEeeEEEc
Confidence 3677887642 321 2235677654
No 143
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.31 E-value=4.3 Score=36.94 Aligned_cols=29 Identities=24% Similarity=0.517 Sum_probs=21.9
Q ss_pred EEeeecCCCCccceeeeecccCCCCceEEEe
Q 006569 107 VYYAHGEDSPTFVRRCYWLLDKTLENIVLVH 137 (640)
Q Consensus 107 ~~y~~~~~~~~f~rr~y~~~~~~~~~ivlvh 137 (640)
+|-+|--..-+-+||-||.||. ..|.|.+
T Consensus 12 GWmVH~t~~d~~rKRHYWrLD~--K~Itlf~ 40 (129)
T 2d9z_A 12 GWMVHYTSRDNLRKRHYWRLDS--KCLTLFQ 40 (129)
T ss_dssp EEEEEEESSCCCCEEEEEEEES--SCEEEES
T ss_pred ceEEEEccCCccccceeeEecC--CeEEEEe
Confidence 6777865555669999999997 5687754
No 144
>3brd_A LIN-12 and GLP-1 phenotype protein 1, isoform A; protein-DNA complex, signaling, transcription, notch; HET: DNA; 2.21A {Caenorhabditis elegans} SCOP: b.1.18.1 b.2.5.8 b.42.7.1 PDB: 2fo1_A 1ttu_A* 3brf_A*
Probab=39.19 E-value=47 Score=36.20 Aligned_cols=83 Identities=20% Similarity=0.231 Sum_probs=56.8
Q ss_pred cceeEEecCCCccCCCCeEEEEECCCCCCccccCCcceEEEeCCcccceeeeeCCceeecCCCCC---------------
Q 006569 364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHS--------------- 428 (640)
Q Consensus 364 lfsI~d~SP~w~~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveVpaeiiq~GVLrC~~Pph~--------------- 428 (640)
.+-|.+..|.-+-- +-.-+-++|..|.. ++.+.||++++-+.+-.+-.|.|.+|+-.
T Consensus 375 PvP~V~~~~~~g~g-~~~mlel~G~nF~~-------~l~VWfG~~~aeT~~r~~e~l~c~vP~~s~~~~~~~~w~~~~~~ 446 (477)
T 3brd_A 375 PCPVVGSLEVDGHG-EASRVELHGRDFKP-------NLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRT 446 (477)
T ss_dssp SCCEEEEEEEECSG-GGCEEEEEEECCCT-------TEEEEETTEEECEEEEETTEEEEECCCHHHHSCTTTHHHHBCTT
T ss_pred CCCeeeEEeecCCC-ceeEEEEEcccCCC-------CCeEEECCccceeeEEccceeeccCCCHHHhCcccccccccccc
Confidence 34466666654321 12556788887755 68999999977777667777999999633
Q ss_pred --CceeEEEEEeCCCCCcccceeeeecC
Q 006569 429 --PGLFLLYMSLDGHKPISQVLNFEYRS 454 (640)
Q Consensus 429 --pG~Vpl~Vt~~n~~~~Sev~~FEYr~ 454 (640)
|=.||+-+...++..-.--..|+|..
T Consensus 447 ~~~~~vPl~LVr~dGviy~t~~tf~y~p 474 (477)
T 3brd_A 447 TGDVEVPISLVRDDGVVYSSGLTFSYKS 474 (477)
T ss_dssp TCCBEEEEEEEETTSEEEEEEEEEETTC
T ss_pred CCceEeeEEEEecCCEEEecCceEEecc
Confidence 33499988887776555556777764
No 145
>3orj_A Sugar-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.16A {Bacteroides ovatus}
Probab=35.51 E-value=41 Score=36.32 Aligned_cols=69 Identities=16% Similarity=0.149 Sum_probs=52.5
Q ss_pred cCCCCeEEEEECCCCCCccccCCcceEEEeCCccc--ceeeeeCCceeecCCCCCC-c------eeEEEEEeCCCCCccc
Q 006569 376 FSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRV--PAEFVQAGVYRCFLPPHSP-G------LFLLYMSLDGHKPISQ 446 (640)
Q Consensus 376 ~~~ggtKVlI~G~f~~~~~~~~~~~~~cmFGdveV--paeiiq~GVLrC~~Pph~p-G------~Vpl~Vt~~n~~~~Se 446 (640)
...-|..|+|.|..|.+ .-.+.||+++| ....+.+..|+-.+|...| | ...++|..+++. .
T Consensus 34 ~a~pGd~ItItGsNL~~-------vtkV~FNdvea~fnstyiTdtsI~VtIPs~aP~G~vd~~VtnkI~VvTdgGt---~ 103 (439)
T 3orj_A 34 FARLGQLIRIEGEGFNG-------LKKVYINGYNCYFNPVFVSNKSFLVSVNSKVPTTEADENVRNTIRLVKDGGE---Y 103 (439)
T ss_dssp EEETTCEEEEEEECCTT-------CCEEEETTEECCBCGGGCCSSEEEEECCTTCCSTTSCTTTTTEEEEEETTEE---E
T ss_pred cccCCCEEEEEeeCCCC-------eeEEEECCEEeeeccccccCCEEEEEcCCCCCCccccccccceEEEEECCCE---E
Confidence 45579999999999977 35899999987 4557799999999998774 4 347788776653 2
Q ss_pred ceeeeecC
Q 006569 447 VLNFEYRS 454 (640)
Q Consensus 447 v~~FEYr~ 454 (640)
...|.+..
T Consensus 104 ty~FtVla 111 (439)
T 3orj_A 104 VYDFQIRA 111 (439)
T ss_dssp EEECEEEC
T ss_pred eeeeEEec
Confidence 34677665
No 146
>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}
Probab=33.56 E-value=12 Score=31.04 Aligned_cols=9 Identities=44% Similarity=1.047 Sum_probs=7.7
Q ss_pred cccCcccee
Q 006569 75 RKDGHNWKK 83 (640)
Q Consensus 75 r~dg~~w~k 83 (640)
=.|||+|||
T Consensus 14 ~~DGy~WRK 22 (76)
T 2ayd_A 14 VNDGYRWRK 22 (76)
T ss_dssp CCCSSCEEE
T ss_pred CCCCchhhh
Confidence 469999997
No 147
>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*
Probab=32.40 E-value=12 Score=31.24 Aligned_cols=10 Identities=40% Similarity=0.856 Sum_probs=8.0
Q ss_pred cccCccceec
Q 006569 75 RKDGHNWKKK 84 (640)
Q Consensus 75 r~dg~~w~kk 84 (640)
-.|||+|||=
T Consensus 17 ~dDGy~WRKY 26 (78)
T 1wj2_A 17 LDDGYRWRKY 26 (78)
T ss_dssp CCSSSCBCCC
T ss_pred CCCCchhhhC
Confidence 4699999864
No 148
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=30.03 E-value=40 Score=30.42 Aligned_cols=30 Identities=30% Similarity=0.523 Sum_probs=23.3
Q ss_pred EEEeeecCCCCccceeeeecccCCCCceEEEe
Q 006569 106 HVYYAHGEDSPTFVRRCYWLLDKTLENIVLVH 137 (640)
Q Consensus 106 ~~~y~~~~~~~~f~rr~y~~~~~~~~~ivlvh 137 (640)
-+|-+|--..-+=+||-||.||. ..|.|-+
T Consensus 11 eGW~VH~t~~d~~rKRHYWrLD~--K~Itlf~ 40 (125)
T 2coa_A 11 EGWVVHYSNKDTLRKRHYWRLDC--KCITLFQ 40 (125)
T ss_dssp EEEEEECCSSSCCCEEEEEEECS--SEEEEES
T ss_pred cceEEEEccCCccccceeeEecC--CeEEEEe
Confidence 47788877777778999999997 5677643
Done!