BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006570
(640 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 100/182 (54%), Gaps = 26/182 (14%)
Query: 435 LPPFRGFS--LEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ 492
L PF + L ++EEATNNFD LIG G G++YKG L DG++V++K R P+
Sbjct: 21 LVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK------RRTPE 74
Query: 493 S------LMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
S +E LS RH HLVS++G C + + + L+ +++ NG+L+ +L
Sbjct: 75 SSQGIEEFETEIETLSFCRHPHLVSLIGFC--------DERNEMILIYKYMENGNLKRHL 126
Query: 547 TDWKKKDM-LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
M + W QR+ I IGA RG+ +LHT I ++K+ NILLD+ K++ +
Sbjct: 127 YGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDF 183
Query: 606 NI 607
I
Sbjct: 184 GI 185
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 26/182 (14%)
Query: 435 LPPFRGFS--LEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ 492
L PF + L ++EEATNNFD LIG G G++YKG L DG++V++K R P+
Sbjct: 21 LVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK------RRTPE 74
Query: 493 S------LMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
S +E LS RH HLVS++G C D N + L+ +++ NG+L+ +L
Sbjct: 75 SSQGIEEFETEIETLSFCRHPHLVSLIGFC-----DERN---EMILIYKYMENGNLKRHL 126
Query: 547 TDWKKKDM-LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
M + W QR+ I IGA RG+ +LHT I ++K+ NILLD+ K++ +
Sbjct: 127 YGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDF 183
Query: 606 NI 607
I
Sbjct: 184 GI 185
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 98/177 (55%), Gaps = 10/177 (5%)
Query: 433 IGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ 492
+ L + FSL E++ A++NF N++G G G++YKG L DG+ V+VK LK ++ +
Sbjct: 20 VHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGE 79
Query: 493 SLMQ-HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDW-K 550
Q VE++S HR+L+ + G C+ T + LV +++NGS+ L + +
Sbjct: 80 LQFQTEVEMISMAVHRNLLRLRGFCM--------TPTERLLVYPYMANGSVASCLRERPE 131
Query: 551 KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ L WP+R I +G+ RG+ +LH P I ++K NILLD+ A + + +
Sbjct: 132 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 188
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 10/177 (5%)
Query: 433 IGLPPFRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ 492
+ L + FSL E++ A++NF N++G G G++YKG L DG V+VK LK ++ +
Sbjct: 12 VHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGE 71
Query: 493 SLMQ-HVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDW-K 550
Q VE++S HR+L+ + G C+ T + LV +++NGS+ L + +
Sbjct: 72 LQFQTEVEMISMAVHRNLLRLRGFCM--------TPTERLLVYPYMANGSVASCLRERPE 123
Query: 551 KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ L WP+R I +G+ RG+ +LH P I ++K NILLD+ A + + +
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 438 FRGFSLEEIEEATNNFDPT------NLIGEGSQGQLYKGFLTDGSRVSVKCL----KLKQ 487
F FS E++ TNNFD N +GEG G +YKG++ + + V+VK L +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 70
Query: 488 RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLT 547
L Q Q +++++K +H +LV +LG + G + LV ++ NGSL D L+
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGF--------SSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 548 DWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
L W R I GA G+ FLH ++K+ NILLD+A TAK+S + +
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 179
Query: 608 PLPSK 612
S+
Sbjct: 180 ARASE 184
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 438 FRGFSLEEIEEATNNFDPT------NLIGEGSQGQLYKGFLTDGSRVSVKCL----KLKQ 487
F FS E++ TNNFD N +GEG G +YKG++ + + V+VK L +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 70
Query: 488 RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLT 547
L Q Q +++++K +H +LV +LG + G + LV ++ NGSL D L+
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGF--------SSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 548 DWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
L W R I GA G+ FLH ++K+ NILLD+A TAK+S + +
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 179
Query: 608 PLPSK 612
S+
Sbjct: 180 ARASE 184
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 438 FRGFSLEEIEEATNNFDPT------NLIGEGSQGQLYKGFLTDGSRVSVKCL----KLKQ 487
F FS E++ TNNFD N +GEG G +YKG++ + + V+VK L +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 64
Query: 488 RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLT 547
L Q Q +++++K +H +LV +LG + G + LV ++ NGSL D L+
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGF--------SSDGDDLCLVYVYMPNGSLLDRLS 116
Query: 548 DWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
L W R I GA G+ FLH ++K+ NILLD+A TAK+S + +
Sbjct: 117 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 173
Query: 608 PLPSK 612
S+
Sbjct: 174 ARASE 178
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 90/185 (48%), Gaps = 22/185 (11%)
Query: 438 FRGFSLEEIEEATNNFDPT------NLIGEGSQGQLYKGFLTDGSRVSVKCL----KLKQ 487
F FS E++ TNNFD N GEG G +YKG++ + + V+VK L +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 61
Query: 488 RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLT 547
L Q Q +++ +K +H +LV +LG + G + LV + NGSL D L+
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGF--------SSDGDDLCLVYVYXPNGSLLDRLS 113
Query: 548 DWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
L W R I GA G+ FLH ++K+ NILLD+A TAK+S + +
Sbjct: 114 CLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 170
Query: 608 PLPSK 612
S+
Sbjct: 171 ARASE 175
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 153 LNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVXXXXXXXXXXDFGPKFP 212
L++S N++ G IP + SL L+ + L N+L G +P Q L+
Sbjct: 420 LHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP--QELMYV--------------- 462
Query: 213 SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLA 272
K + ++IL N L EIPSGL N L +S+N G I ++ L ++ L L+
Sbjct: 463 ---KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 519
Query: 273 GNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCI 308
N S +P + L +++++ NL G +P+ +
Sbjct: 520 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 146 RFWSLEVLNISSNFIYGEIPMEITSLK-NLKSIVLADNLLNGSV-PDLQRLVXXXXXXXX 203
+ L+VL++S N GE+P +T+L +L ++ L+ N +G + P+L +
Sbjct: 338 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 397
Query: 204 XXD--FGPKFPSLSKN---IVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS 258
+ F K P N +VS+ L N L IPS L + +L+ + N G I
Sbjct: 398 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Query: 259 FLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIG 309
L + ++ L L N L+ +P +S LN++ +S+N L G++P IG
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 508
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 149 SLEVLNISSNFIYGEIPMEIT---SLKNLKSIVLADNLLNGSVPDLQRLVXXXXXXXXXX 205
SLEVL++S+N I G + LK + ++ N ++G V D+ R V
Sbjct: 149 SLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV-DVSRCVNLEFLDVSSN 207
Query: 206 DFGPKFPSLSK--NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSL 263
+F P L + + + N L + + +LK +ISSN FVGPI L
Sbjct: 208 NFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPL 265
Query: 264 PSILYLNLAGNQLSEALPVNISCSAK-LNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWN 322
S+ YL+LA N+ + +P +S + L +++S N G +P GS SL ++ + N
Sbjct: 266 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN 325
Query: 323 CLSG 326
SG
Sbjct: 326 NFSG 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 144 INRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDL------------ 191
I R +L +L +S+N G IP E+ ++L + L NL NG++P
Sbjct: 507 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 566
Query: 192 ---QRLVXXXXXXXXXXDFGP----KFPSL-SKNIVSVILRN-NSLRSEIPSG-----LK 237
+R V G +F + S+ + + RN ++ S + G
Sbjct: 567 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 626
Query: 238 NFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297
N + D+S N G I + S+P + LNL N +S ++P + LN +++S
Sbjct: 627 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 686
Query: 298 NLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326
N L G++P + + ++ + + N LSG
Sbjct: 687 NKLDGRIPQAMSALTMLTEIDLSNNNLSG 715
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 20/108 (18%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVXXXXXXXXXXDFG 208
S+ L++S N + G IP EI S+ L + L N ++GS+PD D
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD------------EVGDL- 676
Query: 209 PKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI 256
+ + + L +N L IP + L + D+S+NN GPI
Sbjct: 677 -------RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 717
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 85/172 (49%), Gaps = 22/172 (12%)
Query: 158 NFIYGEIPME-ITSLKNLKSIVLADNLLNGSVPDLQRLVXXXXXXXXXXDFGPKFPSLSK 216
N GE+PM+ + ++ LK + L+ N +G +P+ +LS
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE-------------------SLTNLSA 365
Query: 217 NIVSVILRNNSLRSEI-PSGLKN-FDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274
+++++ L +N+ I P+ +N + L++ + +N F G I L + ++ L+L+ N
Sbjct: 366 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 425
Query: 275 QLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326
LS +P ++ +KL +++ N+L G++P + T++ +N L+G
Sbjct: 426 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 477
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 24/162 (14%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVXXXXXXXXXXDFG 208
+L+ L+IS N + G+ I++ LK + ++ N G +P L
Sbjct: 221 ALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL--------------- 265
Query: 209 PKFPSLSKNIVSVILRNNSLRSEIPSGLKN-FDQLKQFDISSNNFVGPIQSFLFSLPSIL 267
K++ + L N EIP L D L D+S N+F G + F S +
Sbjct: 266 -------KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 318
Query: 268 YLNLAGNQLSEALPVNISCSAK-LNFVEISHNLLIGKLPSCI 308
L L+ N S LP++ + L +++S N G+LP +
Sbjct: 319 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESL 360
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 34/191 (17%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP----DLQRLVXXXXXXXXX 204
+L +++S+N + GEIP I L+NL + L++N +G++P D + L+
Sbjct: 488 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNL- 546
Query: 205 XDFGPKFPS--------LSKNIVS----VILRNNSLRSEIPSGLKNF--------DQLKQ 244
F P+ ++ N ++ V ++N+ ++ E G N +QL +
Sbjct: 547 --FNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKEC-HGAGNLLEFQGIRSEQLNR 603
Query: 245 F------DISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHN 298
+I+S + G + S+++L+++ N LS +P I L + + HN
Sbjct: 604 LSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHN 663
Query: 299 LLIGKLPSCIG 309
+ G +P +G
Sbjct: 664 DISGSIPDEVG 674
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 143 KINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRL 194
++ L +L++SSN + G IP +++L L I L++N L+G +P++ +
Sbjct: 672 EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQF 723
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 234 SGLKNFDQLKQFDISSNNFVGPIQSF--LFSLPSILYLNLAGNQLSEALPVNISCSAKLN 291
SG K L D+S N+ GP+ + L S + +LN++ N L P +S KLN
Sbjct: 91 SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLN 148
Query: 292 FVEI 295
+E+
Sbjct: 149 SLEV 152
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 226 NSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285
N L IP + + L ++ N+ G I + L + L+L+ N+L +P +S
Sbjct: 639 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 698
Query: 286 CSAKLNFVEISHNLLIGKLP 305
L +++S+N L G +P
Sbjct: 699 ALTMLTEIDLSNNNLSGPIP 718
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 153 LNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVXXXXXXXXXXDFGPKFP 212
L++S N++ G IP + SL L+ + L N+L G +P Q L+
Sbjct: 423 LHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP--QELMYV--------------- 465
Query: 213 SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLA 272
K + ++IL N L EIPSGL N L +S+N G I ++ L ++ L L+
Sbjct: 466 ---KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 522
Query: 273 GNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCI 308
N S +P + L +++++ NL G +P+ +
Sbjct: 523 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 146 RFWSLEVLNISSNFIYGEIPMEITSLK-NLKSIVLADNLLNGSV-PDLQRLVXXXXXXXX 203
+ L+VL++S N GE+P +T+L +L ++ L+ N +G + P+L +
Sbjct: 341 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400
Query: 204 XXD--FGPKFPSLSKN---IVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS 258
+ F K P N +VS+ L N L IPS L + +L+ + N G I
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 259 FLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIG 309
L + ++ L L N L+ +P +S LN++ +S+N L G++P IG
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 149 SLEVLNISSNFIYGEIPMEIT---SLKNLKSIVLADNLLNGSVPDLQRLVXXXXXXXXXX 205
SLEVL++S+N I G + LK + ++ N ++G V D+ R V
Sbjct: 152 SLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV-DVSRCVNLEFLDVSSN 210
Query: 206 DFGPKFPSLSK--NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSL 263
+F P L + + + N L + + +LK +ISSN FVGPI L
Sbjct: 211 NFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPL 268
Query: 264 PSILYLNLAGNQLSEALPVNISCSAK-LNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWN 322
S+ YL+LA N+ + +P +S + L +++S N G +P GS SL ++ + N
Sbjct: 269 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN 328
Query: 323 CLSG 326
SG
Sbjct: 329 NFSG 332
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 144 INRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDL------------ 191
I R +L +L +S+N G IP E+ ++L + L NL NG++P
Sbjct: 510 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569
Query: 192 ---QRLVXXXXXXXXXXDFGP----KFPSL-SKNIVSVILRN-NSLRSEIPSG-----LK 237
+R V G +F + S+ + + RN ++ S + G
Sbjct: 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 629
Query: 238 NFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISH 297
N + D+S N G I + S+P + LNL N +S ++P + LN +++S
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689
Query: 298 NLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326
N L G++P + + ++ + + N LSG
Sbjct: 690 NKLDGRIPQAMSALTMLTEIDLSNNNLSG 718
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 20/108 (18%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVXXXXXXXXXXDFG 208
S+ L++S N + G IP EI S+ L + L N ++GS+PD D
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD------------EVGDL- 679
Query: 209 PKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI 256
+ + + L +N L IP + L + D+S+NN GPI
Sbjct: 680 -------RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 720
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 85/172 (49%), Gaps = 22/172 (12%)
Query: 158 NFIYGEIPME-ITSLKNLKSIVLADNLLNGSVPDLQRLVXXXXXXXXXXDFGPKFPSLSK 216
N GE+PM+ + ++ LK + L+ N +G +P+ +LS
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE-------------------SLTNLSA 368
Query: 217 NIVSVILRNNSLRSEI-PSGLKN-FDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274
+++++ L +N+ I P+ +N + L++ + +N F G I L + ++ L+L+ N
Sbjct: 369 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 428
Query: 275 QLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326
LS +P ++ +KL +++ N+L G++P + T++ +N L+G
Sbjct: 429 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 24/162 (14%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVXXXXXXXXXXDFG 208
+L+ L+IS N + G+ I++ LK + ++ N G +P L
Sbjct: 224 ALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL--------------- 268
Query: 209 PKFPSLSKNIVSVILRNNSLRSEIPSGLKN-FDQLKQFDISSNNFVGPIQSFLFSLPSIL 267
K++ + L N EIP L D L D+S N+F G + F S +
Sbjct: 269 -------KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 321
Query: 268 YLNLAGNQLSEALPVNISCSAK-LNFVEISHNLLIGKLPSCI 308
L L+ N S LP++ + L +++S N G+LP +
Sbjct: 322 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESL 363
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 34/191 (17%)
Query: 149 SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP----DLQRLVXXXXXXXXX 204
+L +++S+N + GEIP I L+NL + L++N +G++P D + L+
Sbjct: 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNL- 549
Query: 205 XDFGPKFPS--------LSKNIVS----VILRNNSLRSEIPSGLKNF--------DQLKQ 244
F P+ ++ N ++ V ++N+ ++ E G N +QL +
Sbjct: 550 --FNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKEC-HGAGNLLEFQGIRSEQLNR 606
Query: 245 F------DISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHN 298
+I+S + G + S+++L+++ N LS +P I L + + HN
Sbjct: 607 LSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHN 666
Query: 299 LLIGKLPSCIG 309
+ G +P +G
Sbjct: 667 DISGSIPDEVG 677
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 143 KINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRL 194
++ L +L++SSN + G IP +++L L I L++N L+G +P++ +
Sbjct: 675 EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQF 726
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 234 SGLKNFDQLKQFDISSNNFVGPIQSF--LFSLPSILYLNLAGNQLSEALPVNISCSAKLN 291
SG K L D+S N+ GP+ + L S + +LN++ N L P +S KLN
Sbjct: 94 SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLN 151
Query: 292 FVEI 295
+E+
Sbjct: 152 SLEV 155
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 12/151 (7%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ--SLMQHVELLSKLRHRHLVSILGHC 516
IG GS G +++ GS V+VK L + H + ++ V ++ +LRH ++V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG-- 101
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
PN + +V E++S GSL L ++ L +R+++ +G+ +LH
Sbjct: 102 --AVTQPPN----LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
P I NLK+ N+L+DK T K+ + +
Sbjct: 156 R-NPPIVHRNLKSPNLLVDKKYTVKVCDFGL 185
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR 505
+E +DP ++IG G + + G +VK +++ L ++ V ++
Sbjct: 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRE 149
Query: 506 HRHLVSILGH-CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
L + GH I+T D + S +FLV + + G L DYLT+ K L + +I+
Sbjct: 150 THILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIM 206
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
V FLH A I +LK ENILLD + +LS +
Sbjct: 207 RSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGF 246
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ--SLMQHVELLSKLRHRHLVSILGHC 516
IG GS G +++ GS V+VK L + H + ++ V ++ +LRH ++V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG-- 101
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
PN +V E++S GSL L ++ L +R+++ +G+ +LH
Sbjct: 102 --AVTQPPNLS----IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
P I +LK+ N+L+DK T K+ + +
Sbjct: 156 R-NPPIVHRDLKSPNLLVDKKYTVKVCDFGL 185
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 80
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V+E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 81 VVSEEP-----IYIVIEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERM- 133
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGL 160
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 80
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V+E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 81 VVSEEP-----IYIVIEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERM- 133
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGL 160
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 73
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 74 VVSEEP-----IYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVERM- 126
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 127 --NYVHRDLRAANILVGENLVCKVADFGL 153
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 77/149 (51%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV + + ++
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQL--YAVV 331
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ + P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 332 S--EEP-----IYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVER-- 381
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 382 -MNYVHRDLRAANILVGENLVCKVADFGL 409
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 246
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 247 VVSEEP-----IYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVER-- 298
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 299 -MNYVHRDLRAANILVGENLVCKVADFGL 326
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 69
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 70 VVSEEP-----IYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERM- 122
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 123 --NYVHRDLRAANILVGENLVCKVADFGL 149
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 246
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 247 VVSEEP-----IYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVER-- 298
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 299 -MNYVHRDLRAANILVGENLVCKVADFGL 326
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 247
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 248 VVSEEP-----IYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVER-- 299
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 300 -MNYVHRDLRAANILVGENLVCKVADFGL 327
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 71
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 72 VVSEEP-----IYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERM- 124
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 125 --NYVHRDLRAANILVGENLVCKVADFGL 151
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 80
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 81 VVSEEP-----IYIVCEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERM- 133
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGL 160
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 80
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V+E++S G L D+L K L+ PQ + + G+ ++
Sbjct: 81 VVSEEP-----IYIVMEYMSKGCLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERM- 133
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGL 160
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 80
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 81 VVSEEP-----IYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERM- 133
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGL 160
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 246
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 247 VVSEEP-----IYIVGEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVER-- 298
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 299 -MNYVHRDLRAANILVGENLVCKVADFGL 326
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ K+RH LV +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKIRHEKLVQLYA---- 80
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 81 VVSEEP-----IYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERM- 133
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 134 --NYVHRDLRAANILVGENLVCKVADFGL 160
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKL- 504
AT+ ++P IG G+ G +YK G V++K +++ + LP S ++ V LL +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 505 --RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
H ++V ++ C + D V LV EH+ LR YL D L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDR---EIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKD 116
Query: 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
++ RG+ FLH I +LK ENIL+ T KL+ + +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKL- 504
AT+ ++P IG G+ G +YK G V++K +++ + LP S ++ V LL +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 505 --RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
H ++V ++ C + D V LV EH+ LR YL D L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDR---EIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKD 116
Query: 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
++ RG+ FLH I +LK ENIL+ T KL+ + +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKL- 504
AT+ ++P IG G+ G +YK G V++K +++ + LP S ++ V LL +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 505 --RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
H ++V ++ C + D V LV EH+ LR YL D L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDR---EIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKD 116
Query: 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
++ RG+ FLH I +LK ENIL+ T KL+ + +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 158
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 70
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P + +V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 71 VVSEEP-----IXIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVERM- 123
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 124 --NYVHRDLRAANILVGENLVCKVADFGL 150
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 80
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E++S GSL D+L K L+ PQ + + G+ ++
Sbjct: 81 VVSEEP-----IYIVTEYMSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERM- 133
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L NIL+ + L K++ + +
Sbjct: 134 --NYVHRDLAAANILVGENLVCKVADFGL 160
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 77
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E+++ GSL D+L K L+ PQ + + G+ ++
Sbjct: 78 VVSEEP-----IYIVTEYMNKGSLLDFLKGETGK-YLRLPQLVDMSAQIASGMAYVERM- 130
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 131 --NYVHRDLRAANILVGENLVCKVADFGL 157
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G+G G+++ G +RV++K LK P++ +Q +++ KLRH LV +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYA---- 77
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E+++ GSL D+L + L+ PQ + + G+ ++
Sbjct: 78 VVSEEP-----IYIVTEYMNKGSLLDFLKG-ETGKYLRLPQLVDMSAQIASGMAYVERM- 130
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ + L K++ + +
Sbjct: 131 --NYVHRDLRAANILVGENLVCKVADFGL 157
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G ++V++K LK P+S ++ +++ KL+H LV +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMS-PESFLEEAQIMKKLKHDKLVQLYA---- 71
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+ P +++V E+++ GSL D+L D + + LK P + + G+ ++
Sbjct: 72 VVSEEP-----IYIVTEYMNKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIERM- 124
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L++ NIL+ L K++ + +
Sbjct: 125 --NYIHRDLRSANILVGNGLICKIADFGL 151
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 71/168 (42%), Gaps = 17/168 (10%)
Query: 449 ATNNFDPTNLIGEGSQGQLYK------GFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLS 502
AT+ ++P IG G+ G +YK G V V LP S ++ V LL
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 503 KL---RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
+L H ++V ++ C + D V LV EH+ LR YL D L
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDR---EIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAET 121
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
++ RG+ FLH I +LK ENIL+ T KL+ + +
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL 166
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IG+G+ G +Y + G V+++ + L+Q+ + ++ + ++ + ++ ++V+
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN------ 82
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
Y D G +++V+E+++ GSL D +T+ + Q A+ + ++FLH+
Sbjct: 83 --YLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN 136
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGY 605
+ N+K++NILL + KL+ +
Sbjct: 137 ---QVIHRNIKSDNILLGMDGSVKLTDF 161
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 457 NLIGEGSQGQLYKG-FLTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+ +G G+ G++ G G +V+VK L K++ + + + ++ L RH H++ +
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
YQ +T S +F+V+E++S G L DY+ K L + + GV
Sbjct: 82 -------YQV-ISTPSDIFMVMEYVSGGELFDYIC---KNGRLDEKESRRLFQQILSGVD 130
Query: 573 FLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ H + + +LK EN+LLD + AK++ + +
Sbjct: 131 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGL 162
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 19/143 (13%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQ----HVELLSKLRHRHLVSILG 514
IG GS +YKG T+ + V V +L+ R L +S Q E L L+H ++V
Sbjct: 34 IGRGSFKTVYKGLDTETT-VEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK---KDMLKWPQRMAIIIGATRGV 571
+++ + LV E ++G+L+ YL +K K + W +++ +G+
Sbjct: 93 ----SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQIL------KGL 142
Query: 572 QFLHTGVAPGIFGNNLKTENILL 594
QFLHT P I +LK +NI +
Sbjct: 143 QFLHTRTPP-IIHRDLKCDNIFI 164
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 73
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 74 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
NL+ NIL+ L+ K++ + +
Sbjct: 124 R---NYIHRNLRAANILVSDTLSCKIADFGL 151
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 79/150 (52%), Gaps = 15/150 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ + ++V+VK LK + Q+ ++ L+ L+H LV + + ++
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRL--YAVV 77
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYL-TDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
T ++ P ++++ E+++ GSL D+L +D K +L P+ + G+ ++
Sbjct: 78 T-REEP-----IYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIER- 128
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ N+L+ ++L K++ + +
Sbjct: 129 --KNYIHRDLRAANVLVSESLMCKIADFGL 156
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 14/173 (8%)
Query: 442 SLEEIE-----EATNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRHLPQSLM 495
SL+EI+ + F+ L+G G+ GQ+YKG + G ++K + + + +
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIK 68
Query: 496 QHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
Q + +L K HR++ + G I ++ P ++LV+E GS+ D + + K +
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFI--KKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNT 125
Query: 555 LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
LK I RG+ LH + ++K +N+LL + KL + +
Sbjct: 126 LKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 175
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IG+G+ G +Y + G V+++ + L+Q+ + ++ + ++ + ++ ++V+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN------ 81
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
Y D G +++V+E+++ GSL D +T+ + Q A+ + ++FLH+
Sbjct: 82 --YLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGY 605
+ ++K++NILL + KL+ +
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDF 160
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IG+G+ G +Y + G V+++ + L+Q+ + ++ + ++ + ++ ++V+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN------ 81
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
Y D G +++V+E+++ GSL D +T+ + Q A+ + ++FLH+
Sbjct: 82 --YLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGY 605
+ ++K++NILL + KL+ +
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDF 160
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IG+G+ G +Y + G V+++ + L+Q+ + ++ + ++ + ++ ++V+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN------ 81
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
Y D G +++V+E+++ GSL D +T+ + Q A+ + ++FLH+
Sbjct: 82 --YLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGY 605
+ ++K++NILL + KL+ +
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDF 160
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
Query: 459 IGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IG+G+ G +Y + G V+++ + L+Q+ + ++ + ++ + ++ ++V+
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN------ 82
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
Y D G +++V+E+++ GSL D +T+ + Q A+ + ++FLH+
Sbjct: 83 --YLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN 136
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGY 605
+ ++K++NILL + KL+ +
Sbjct: 137 ---QVIHRDIKSDNILLGMDGSVKLTDF 161
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 77
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 78 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L+ K++ + +
Sbjct: 128 R---NYIHRDLRAANILVSDTLSCKIADFGL 155
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 64 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 112 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ + ++V+VK LK + Q+ ++ L+ L+H LV + + ++
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRL--YAVV 76
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYL-TDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
T ++ P ++++ E ++ GSL D+L +D K +L P+ + G+ ++
Sbjct: 77 T-KEEP-----IYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIER- 127
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ N+L+ ++L K++ + +
Sbjct: 128 --KNYIHRDLRAANVLVSESLMCKIADFGL 155
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 64 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 112 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 65 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 113 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 86
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 87 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L+ K++ + +
Sbjct: 137 R---NYIHRDLRAANILVSDTLSCKIADFGL 164
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 79
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 80 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L+ K++ + +
Sbjct: 130 R---NYIHRDLRAANILVSDTLSCKIADFGL 157
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 77
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 78 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L+ K++ + +
Sbjct: 128 R---NYIHRDLRAANILVSDTLSCKIADFGL 155
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 77
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 78 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L+ K++ + +
Sbjct: 128 R---NYIHRDLRAANILVSDTLSCKIADFGL 155
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 78
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 79 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L+ K++ + +
Sbjct: 129 R---NYIHRDLRAANILVSDTLSCKIADFGL 156
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 77
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 78 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L+ K++ + +
Sbjct: 128 R---NYIHRDLRAANILVSDTLSCKIADFGL 155
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLK----LKQRHLPQSLMQHVE 499
+I+ +F+ ++G+GS G+++ F ++K LK L + ++++
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
L H L H T+Q T +F V+E+++ G L ++ K D+ +
Sbjct: 72 LSLAWEH----PFLTHMFCTFQ----TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF 123
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A II G+QFLH+ GI +LK +NILLDK K++ + +
Sbjct: 124 YAAEII---LGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGM 165
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 83
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 84 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L+ K++ + +
Sbjct: 134 R---NYIHRDLRAANILVSDTLSCKIADFGL 161
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 85
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 86 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L+ K++ + +
Sbjct: 136 R---NYIHRDLRAANILVSDTLSCKIADFGL 163
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 24/154 (15%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G + G G++V+VKC+K Q+ + ++++LRH +LV +LG +
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIV- 75
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+++V E+++ GSL DYL + + +L + + +++L
Sbjct: 76 ------EEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLE--- 125
Query: 579 APGIFGNN-----LKTENILLDKALTAKLSGYNI 607
GNN L N+L+ + AK+S + +
Sbjct: 126 -----GNNFVHRDLAARNVLVSEDNVAKVSDFGL 154
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 82
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 83 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L+ K++ + +
Sbjct: 133 R---NYIHRDLRAANILVSDTLSCKIADFGL 160
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 24/154 (15%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G + G G++V+VKC+K Q+ + ++++LRH +LV +LG +
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIV- 84
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+++V E+++ GSL DYL + + +L + + +++L
Sbjct: 85 ------EEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLE--- 134
Query: 579 APGIFGNN-----LKTENILLDKALTAKLSGYNI 607
GNN L N+L+ + AK+S + +
Sbjct: 135 -----GNNFVHRDLAARNVLVSEDNVAKVSDFGL 163
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINAMLNH 64
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 65 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 113 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 83
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 84 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L+ K++ + +
Sbjct: 134 R---NYIHRDLRAANILVSDTLSCKIADFGL 161
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 72
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 73 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L+ K++ + +
Sbjct: 123 R---NYIHRDLRAANILVSDTLSCKIADFGL 150
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 24/154 (15%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G + G G++V+VKC+K Q+ + ++++LRH +LV +LG +
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIV- 256
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+++V E+++ GSL DYL + + +L + + +++L
Sbjct: 257 ------EEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLE--- 306
Query: 579 APGIFGNN-----LKTENILLDKALTAKLSGYNI 607
GNN L N+L+ + AK+S + +
Sbjct: 307 -----GNNFVHRDLAARNVLVSEDNVAKVSDFGL 335
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 64 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 112 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 24/154 (15%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G + G G++V+VKC+K Q+ + ++++LRH +LV +LG +
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIV- 69
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
+++V E+++ GSL DYL + + +L + + +++L
Sbjct: 70 ------EEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLE--- 119
Query: 579 APGIFGNN-----LKTENILLDKALTAKLSGYNI 607
GNN L N+L+ + AK+S + +
Sbjct: 120 -----GNNFVHRDLAARNVLVSEDNVAKVSDFGL 148
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 64 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 112 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 62
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 63 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 110
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 111 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 149
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 64 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 112 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 64 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 112 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ G+ ++V+VK LK + P + + L+ +L+H+ LV + + ++
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRL--YAVV 87
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHT 576
T + ++++ E++ NGSL D+L K +K + + A G+ F+
Sbjct: 88 TQE-------PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ L+ K++ + +
Sbjct: 138 R---NYIHRDLRAANILVSDTLSCKIADFGL 165
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 64 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 112 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 65 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 113 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 64 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 112 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 65 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 113 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 65 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 113 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 65 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 113 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 65 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 113 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 65 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 112
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 113 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 151
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 64 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 112 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 64 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 112 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 64 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 112 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 450 TNNFDPTNLIGEGSQG--QLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH 506
++D +GEG+ G QL +T+ + V+VK + +K+ P+++ + + + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM-LKWPQRMAIII 565
++V GH G+ +L LE+ S G L D + + D+ + P
Sbjct: 64 ENVVKFYGH--------RREGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFH 111
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
GV +LH G+ GI ++K EN+LLD+ K+S + +
Sbjct: 112 QLMAGVVYLH-GI--GITHRDIKPENLLLDERDNLKISDFGL 150
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 457 NLIGEGSQGQLYKG-FLTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+ +G G+ G++ G G +V+VK L K++ + + + ++ L RH H++ +
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
YQ +T + F+V+E++S G L DY+ + + ++ + I+ A V
Sbjct: 77 -------YQV-ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA---VD 125
Query: 573 FLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ H + + +LK EN+LLD + AK++ + +
Sbjct: 126 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGL 157
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 457 NLIGEGSQGQLYKG-FLTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+ +G G+ G++ G G +V+VK L K++ + + + ++ L RH H++ +
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ 572
YQ +T + F+V+E++S G L DY+ + + ++ + I+ A V
Sbjct: 77 -------YQV-ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA---VD 125
Query: 573 FLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ H + + +LK EN+LLD + AK++ + +
Sbjct: 126 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGL 157
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 454 DPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
DP+ L IG G G ++ G+ + +V++K ++ + + ++ E++ KL H
Sbjct: 3 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPK 61
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
LV + G C+ + + LV E + +G L DYL ++ + + + +
Sbjct: 62 LVQLYGVCL--------EQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVC 111
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ +L + +L N L+ + K+S + +
Sbjct: 112 EGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGM 147
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 454 DPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
DP+ L IG G G ++ G+ + +V++K ++ + + ++ E++ KL H
Sbjct: 5 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPK 63
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
LV + G C+ + + LV E + +G L DYL ++ + + + +
Sbjct: 64 LVQLYGVCL--------EQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVC 113
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ +L + +L N L+ + K+S + +
Sbjct: 114 EGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGM 149
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IGEGS G + + + G V+VK + L+++ + L V ++ +H ++V + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
+ G +++V+E + G+L D +T + + Q A+ + + + LH
Sbjct: 88 V--------GDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLH-- 133
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYN 606
A G+ ++K+++ILL KLS +
Sbjct: 134 -AQGVIHRDIKSDSILLTHDGRVKLSDFG 161
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 23/147 (15%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G+++ G G +V+VK + S + E+ + RH +ILG
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRH-ENILG---F 96
Query: 519 TYQDHPNTGS--TVFLVLEHISNGSLRDYL--TDWKKKDMLKWPQRMAIIIGATRGVQFL 574
D TGS ++L+ ++ NGSL DYL T K MLK + + G+ L
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLK------LAYSSVSGLCHL 150
Query: 575 HTGV-----APGIFGNNLKTENILLDK 596
HT + P I +LK++NIL+ K
Sbjct: 151 HTEIFSTQGKPAIAHRDLKSKNILVKK 177
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 29/148 (19%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLP--------QSLMQHVELLSKLRHRH 508
+IG G G++Y+ F G V+VK RH P +++ Q +L + L+H +
Sbjct: 13 EIIGIGGFGKVYRAFWI-GDEVAVKA----ARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-KKDML-KWPQRMAIIIG 566
++++ G C+ PN + LV+E G L L+ + D+L W ++A
Sbjct: 68 IIALRGVCL----KEPN----LCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIA---- 115
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILL 594
RG+ +LH I +LK+ NIL+
Sbjct: 116 --RGMNYLHDEAIVPIIHRDLKSSNILI 141
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IGEGS G + + + G V+VK + L+++ + L V ++ +H ++V + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
+ G +++V+E + G+L D +T + + Q A+ + + + LH
Sbjct: 97 V--------GDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLH-- 142
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYN 606
A G+ ++K+++ILL KLS +
Sbjct: 143 -AQGVIHRDIKSDSILLTHDGRVKLSDFG 170
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 454 DPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
DP+ L IG G G ++ G+ + +V++K ++ + + ++ E++ KL H
Sbjct: 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPK 66
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
LV + G C+ + + LV E + +G L DYL ++ + + + +
Sbjct: 67 LVQLYGVCL--------EQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVC 116
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ +L + +L N L+ + K+S + +
Sbjct: 117 EGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGM 152
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IGEGS G + + + G V+VK + L+++ + L V ++ +H ++V + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
+ G +++V+E + G+L D +T + + Q A+ + + + LH
Sbjct: 99 V--------GDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLH-- 144
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYN 606
A G+ ++K+++ILL KLS +
Sbjct: 145 -AQGVIHRDIKSDSILLTHDGRVKLSDFG 172
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
L +L H ++T D + V L+LE +S G L D+L +K+ L + + I
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLA---QKESLSEEEATSFIKQIL 125
Query: 569 RGVQFLHTGVAPGIFGNNLKTENI-LLDKALTAKLSGYNIPLP 610
GV +LHT I +LK ENI LLDK NIP+P
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDK---------NIPIP 156
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 19/159 (11%)
Query: 454 DPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
DP+ L IG G G ++ G+ + +V++K ++ + + ++ E++ KL H
Sbjct: 5 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPK 63
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
LV + G C+ + P + LV E + +G L DYL ++ + + + +
Sbjct: 64 LVQLYGVCL---EQAP-----ICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVC 113
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ +L + +L N L+ + K+S + +
Sbjct: 114 EGMAYLEEA---SVIHRDLAARNCLVGENQVIKVSDFGM 149
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 93
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T NL T NIL
Sbjct: 94 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRNLATRNIL 147
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 148 VENENRVKIGDFGL 161
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IGEGS G + + + G V+VK + L+++ + L V ++ +H ++V + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
+ G +++V+E + G+L D +T + + Q A+ + + + LH
Sbjct: 219 V--------GDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLH-- 264
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYN 606
A G+ ++K+++ILL KLS +
Sbjct: 265 -AQGVIHRDIKSDSILLTHDGRVKLSDFG 292
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IGEGS G + + + G V+VK + L+++ + L V ++ +H ++V + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
+ G +++V+E + G+L D +T + + Q A+ + + + LH
Sbjct: 92 V--------GDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLH-- 137
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYN 606
A G+ ++K+++ILL KLS +
Sbjct: 138 -AQGVIHRDIKSDSILLTHDGRVKLSDFG 165
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 19/159 (11%)
Query: 454 DPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
DP+ L IG G G ++ G+ + +V++K +K + ++ E++ KL H
Sbjct: 25 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPK 83
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
LV + G C+ + + LV E + +G L DYL ++ + + + +
Sbjct: 84 LVQLYGVCL--------EQAPICLVFEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVC 133
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ +L + +L N L+ + K+S + +
Sbjct: 134 EGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGM 169
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
L +L H ++T D + V L+LE +S G L D+L +K+ L + + I
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLA---QKESLSEEEATSFIKQIL 125
Query: 569 RGVQFLHTGVAPGIFGNNLKTENI-LLDKALTAKLSGYNIPLP 610
GV +LHT I +LK ENI LLDK NIP+P
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDK---------NIPIP 156
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
L +L H ++T D + V L+LE +S G L D+L +K+ L + + I
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLA---QKESLSEEEATSFIKQIL 125
Query: 569 RGVQFLHTGVAPGIFGNNLKTENI-LLDKALTAKLSGYNIPLP 610
GV +LHT I +LK ENI LLDK NIP+P
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDK---------NIPIP 156
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV EH+ L+ ++ D + P + +
Sbjct: 63 NHPNIVKLL--------DVIHTENKLYLVFEHVDQ-DLKKFM-DASALTGIPLPLIKSYL 112
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 452 NFDPTNLIGEG--SQGQLYKGFLTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKLRHR 507
N+ IG+G ++ +L + LT G V+VK + Q + Q L + V ++ L H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLT--DWKKKDMLKWPQRMAIII 565
++V + + T T++LV+E+ S G + DYL W K+ + R +
Sbjct: 67 NIVKLF--------EVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIV-- 116
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
VQ+ H I +LK EN+LLD + K++ +
Sbjct: 117 ---SAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADF 150
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
L +L H ++T D + V L+LE +S G L D+L +K+ L + + I
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLA---QKESLSEEEATSFIKQIL 125
Query: 569 RGVQFLHTGVAPGIFGNNLKTENI-LLDKALTAKLSGYNIPLP 610
GV +LHT I +LK ENI LLDK NIP+P
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDK---------NIPIP 156
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+D++ D + P + +
Sbjct: 60 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKDFM-DASALTGIPLPLIKSYL 109
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK EN+L++ KL+ + +
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGL 149
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
L +L H ++T D + V L+LE +S G L D+L +K+ L + + I
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLA---QKESLSEEEATSFIKQIL 125
Query: 569 RGVQFLHTGVAPGIFGNNLKTENI-LLDKALTAKLSGYNIPLP 610
GV +LHT I +LK ENI LLDK NIP+P
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDK---------NIPIP 156
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E +S L+D++ D + P + +
Sbjct: 63 NHPNIVKLL--------DVIHTENKLYLVFEFLSM-DLKDFM-DASALTGIPLPLIKSYL 112
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 452 NFDPTNLIGEG--SQGQLYKGFLTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKLRHR 507
N+ IG+G ++ +L + LT G V+VK + Q + Q L + V ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V + + T T++LV+E+ S G + DYL + + + I+ A
Sbjct: 74 NIVKLF--------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
VQ+ H I +LK EN+LLD + K++ +
Sbjct: 126 ---VQYCHQKF---IVHRDLKAENLLLDADMNIKIADF 157
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 462 GSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521
G GQL++ + V +K L R+ +S + ++SKL H+HLV G C+
Sbjct: 33 GDYGQLHE------TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCV---- 82
Query: 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG 581
G LV E + GSL YL K + W +A + A + FL
Sbjct: 83 ----CGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAA--AMHFLEENT--- 133
Query: 582 IFGNNLKTENILL 594
+ N+ +NILL
Sbjct: 134 LIHGNVCAKNILL 146
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 452 NFDPTNLIGEG--SQGQLYKGFLTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKLRHR 507
N+ IG+G ++ +L + LT G V+VK + Q + Q L + V ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V + + T T++LV+E+ S G + DYL + + + I+ A
Sbjct: 74 NIVKLF--------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
VQ+ H I +LK EN+LLD + K++ +
Sbjct: 126 ---VQYCHQKF---IVHRDLKAENLLLDADMNIKIADF 157
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 19/171 (11%)
Query: 452 NFDPTNLIGEG--SQGQLYKGFLTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKLRHR 507
N+ IG+G ++ +L + LT G V+VK + Q + Q L + V ++ L H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V + + T T++LV+E+ S G + DYL + + + I+ A
Sbjct: 75 NIVKLF--------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 126
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTLS 618
VQ+ H I +LK EN+LLD + K++ + V N L
Sbjct: 127 ---VQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLD 171
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 452 NFDPTNLIGEG--SQGQLYKGFLTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKLRHR 507
N+ IG+G ++ +L + LT G V+VK + Q + Q L + V ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V + + T T++LV+E+ S G + DYL + + + I+ A
Sbjct: 74 NIVKLF--------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
VQ+ H I +LK EN+LLD + K++ +
Sbjct: 126 ---VQYCHQKF---IVHRDLKAENLLLDADMNIKIADF 157
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 454 DPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
DP+ L IG G G ++ G+ + +V++K ++ + + ++ E++ KL H
Sbjct: 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPK 64
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
LV + G C+ + + LV E + +G L DYL ++ + + + +
Sbjct: 65 LVQLYGVCL--------EQAPICLVTEFMEHGCLSDYLR--TQRGLFAAETLLGMCLDVC 114
Query: 569 RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ +L + +L N L+ + K+S + +
Sbjct: 115 EGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGM 150
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLK----LKQRHLPQSLMQHVE 499
+I+ +F ++G+GS G+++ F ++K LK L + ++++
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
L H L H T+Q T +F V+E+++ G L ++ K D+ +
Sbjct: 71 LSLAWEH----PFLTHMFCTFQ----TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF 122
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A II G+QFLH+ GI +LK +NILLDK K++ + +
Sbjct: 123 YAAEII---LGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGM 164
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRH 506
NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V +L D +T + ++LV EH+ L+ ++ D + P + +
Sbjct: 61 PNIVKLL--------DVIHTENKLYLVFEHVHQ-DLKTFM-DASALTGIPLPLIKSYLFQ 110
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E +S L+D++ D + P + +
Sbjct: 62 NHPNIVKLL--------DVIHTENKLYLVFEFLSM-DLKDFM-DASALTGIPLPLIKSYL 111
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 112 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 151
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 459 IGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IGEGS G + + + G V+VK + L+++ + L V ++ +H ++V + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
+ G +++V+E + G+L D +T + + Q A+ + + + LH
Sbjct: 142 V--------GDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLH-- 187
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYN 606
A G+ ++K+++ILL KLS +
Sbjct: 188 -AQGVIHRDIKSDSILLTHDGRVKLSDFG 215
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 32/158 (20%)
Query: 453 FDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ---SLMQHVELLSKLRHRHL 509
+DPTN +G+ G V+VK LK PQ Q +++L L H H+
Sbjct: 52 YDPTN---DGT-----------GEMVAVKALKADAG--PQHRSGWKQEIDILRTLYHEHI 95
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
+ G C +++ LV+E++ GSLRDYL + + Q +
Sbjct: 96 IKYKGCC------EDAGAASLQLVMEYVPLGSLRDYLP----RHSIGLAQLLLFAQQICE 145
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ +LH A +L N+LLD K+ + +
Sbjct: 146 GMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGL 180
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Query: 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGH 515
++ EG +Y+ + G ++K L + ++++Q V + KL H ++V
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
+ ++ +TG FL+L + G L ++L + + L + I R VQ +H
Sbjct: 95 ASIG-KEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLSGYN 606
P I +LK EN+LL T KL +
Sbjct: 154 RQKPP-IIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 123
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 124 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 177
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 178 VENENRVKIGDFGL 191
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQ-----HVELLSKLR 505
N+ +GEGS G++ + T G +V++K + ++ L +S MQ + L LR
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN--KKVLAKSDMQGRIEREISYLRLLR 71
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
H H++ + D + + +V+E+ N L DY+ K + + II
Sbjct: 72 HPHIIKLY--------DVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQII 122
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A V++ H I +LK EN+LLD+ L K++ + +
Sbjct: 123 SA---VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 158
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 452 NFDPTNLIGEG--SQGQLYKGFLTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKLRHR 507
N+ IG+G ++ +L + LT G V+V+ + Q + Q L + V ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V + + T T++LV+E+ S G + DYL + + + I+ A
Sbjct: 74 NIVKLF--------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
VQ+ H I +LK EN+LLD + K++ +
Sbjct: 126 ---VQYCHQKF---IVHRDLKAENLLLDADMNIKIADF 157
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 452 NFDPTNLIGEG--SQGQLYKGFLTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKLRHR 507
N+ IG+G ++ +L + LT G V+V+ + Q + Q L + V ++ L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V + + T T++LV+E+ S G + DYL + + + I+ A
Sbjct: 74 NIVKLF--------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
VQ+ H I +LK EN+LLD + K++ +
Sbjct: 126 ---VQYCHQKF---IVHRDLKAENLLLDADMNIKIADF 157
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 99
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 100 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 153
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 154 VENENRVKIGDFGL 167
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 92
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 93 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 146
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 147 VENENRVKIGDFGL 160
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 97
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 98 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 151
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 152 VENENRVKIGDFGL 165
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 32/158 (20%)
Query: 453 FDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ---SLMQHVELLSKLRHRHL 509
+DPTN +G+ G V+VK LK PQ Q +++L L H H+
Sbjct: 35 YDPTN---DGT-----------GEMVAVKALKADCG--PQHRSGWKQEIDILRTLYHEHI 78
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
+ G C +D ++ LV+E++ GSLRDYL + + Q +
Sbjct: 79 IKYKGCC----EDQGE--KSLQLVMEYVPLGSLRDYLP----RHSIGLAQLLLFAQQICE 128
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ +LH A NL N+LLD K+ + +
Sbjct: 129 GMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGL 163
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQ-----HVELLSKLR 505
N+ +GEGS G++ + T G +V++K + ++ L +S MQ + L LR
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN--KKVLAKSDMQGRIEREISYLRLLR 72
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
H H++ + D + + +V+E+ N L DY+ K + + II
Sbjct: 73 HPHIIKLY--------DVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQII 123
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A V++ H I +LK EN+LLD+ L K++ + +
Sbjct: 124 SA---VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 159
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 98
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 99 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 152
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 153 VENENRVKIGDFGL 166
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQ-----HVELLSKLR 505
N+ +GEGS G++ + T G +V++K + ++ L +S MQ + L LR
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN--KKVLAKSDMQGRIEREISYLRLLR 62
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
H H++ + D + + +V+E+ N L DY+ K + + II
Sbjct: 63 HPHIIKLY--------DVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQII 113
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A V++ H I +LK EN+LLD+ L K++ + +
Sbjct: 114 SA---VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 149
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 95
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 96 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 149
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 150 VENENRVKIGDFGL 163
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 92
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 93 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 146
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 147 VENENRVKIGDFGL 160
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 32/158 (20%)
Query: 453 FDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ---SLMQHVELLSKLRHRHL 509
+DPTN DG+ V LK+ PQ + +E+L L H H+
Sbjct: 30 YDPTN----------------DGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
V G C +D +V LV+E++ GSLRDYL + + Q +
Sbjct: 74 VKYKGCC----EDQGE--KSVQLVMEYVPLGSLRDYLP----RHCVGLAQLLLFAQQICE 123
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ +LH A L N+LLD K+ + +
Sbjct: 124 GMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGL 158
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 452 NFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQ-----HVELLSKLR 505
N+ +GEGS G++ + T G +V++K + ++ L +S MQ + L LR
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN--KKVLAKSDMQGRIEREISYLRLLR 66
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
H H++ + D + + +V+E+ N L DY+ K + + II
Sbjct: 67 HPHIIKLY--------DVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQII 117
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A V++ H I +LK EN+LLD+ L K++ + +
Sbjct: 118 SA---VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGL 153
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 30/184 (16%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRHRH 508
+N LIG G G +YKG L D V+VK +Q + + + V L+ H +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLME---HDN 68
Query: 509 LVS-ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
+ I+G +T + LV+E+ NGSL YL+ W +
Sbjct: 69 IARFIVGDERVT----ADGRMEYLLVMEYYPNGSLXKYLS----LHTSDWVSSCRLAHSV 120
Query: 568 TRGVQFLHTGV------APGIFGNNLKTENILL---------DKALTAKLSGYNIPLPSK 612
TRG+ +LHT + P I +L + N+L+ D L+ +L+G + P +
Sbjct: 121 TRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGE 180
Query: 613 VRNT 616
N
Sbjct: 181 EDNA 184
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 96
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 97 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 150
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 151 VENENRVKIGDFGL 164
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 91
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 92 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 145
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 146 VENENRVKIGDFGL 159
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 90
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 91 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 144
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 145 VENENRVKIGDFGL 158
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 92
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 93 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 146
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 147 VENENRVKIGDFGL 160
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 32/158 (20%)
Query: 453 FDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ---SLMQHVELLSKLRHRHL 509
+DPTN DG+ V LK+ PQ + +E+L L H H+
Sbjct: 29 YDPTN----------------DGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
V G C +D +V LV+E++ GSLRDYL + + Q +
Sbjct: 73 VKYKGCC----EDQGE--KSVQLVMEYVPLGSLRDYLP----RHCVGLAQLLLFAQQICE 122
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ +LH A L N+LLD K+ + +
Sbjct: 123 GMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGL 157
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E +S L+ ++ D + P + +
Sbjct: 63 NHPNIVKLL--------DVIHTENKLYLVFEFLSM-DLKKFM-DASALTGIPLPLIKSYL 112
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK EN+L++ KL+ + +
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGL 152
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLK---LKQRHLPQSLMQHVELLSKL 504
+NF+ ++G+GS G++ + + G +VK LK + Q + M +LS
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
R+ ++ L C T +F V+E ++ G L ++ ++ D + A I
Sbjct: 81 RNHPFLTQLFCCF-------QTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEI 133
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
I A + FLH GI +LK +N+LLD KL+ + +
Sbjct: 134 ISA---LMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGM 170
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E +S L+ ++ D + P + +
Sbjct: 61 NHPNIVKLL--------DVIHTENKLYLVFEFLSM-DLKKFM-DASALTGIPLPLIKSYL 110
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK EN+L++ KL+ + +
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGL 150
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 110
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 111 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 164
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 165 VENENRVKIGDFGL 178
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 110
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 111 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 164
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 165 VENENRVKIGDFGL 178
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 14/135 (10%)
Query: 475 GSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532
G +V+VK LK + H+ L + +E+L L H ++V G C + G+ + L
Sbjct: 50 GEQVAVKSLKPESGGNHIA-DLKKEIEILRNLYHENIVKYKGICT------EDGGNGIKL 102
Query: 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592
++E + +GSL++YL K K+ + Q++ + +G+ +L + +L N+
Sbjct: 103 IMEFLPSGSLKEYLP--KNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNV 157
Query: 593 LLDKALTAKLSGYNI 607
L++ K+ + +
Sbjct: 158 LVESEHQVKIGDFGL 172
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G + L K D QR A
Sbjct: 71 RHPNILRLYGY----FHD----ATRVYLILEYAPRGEVYKELQKLSKFD----EQRTATY 118
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R TL
Sbjct: 119 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 14/135 (10%)
Query: 475 GSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFL 532
G +V+VK LK + H+ L + +E+L L H ++V G C + G+ + L
Sbjct: 38 GEQVAVKSLKPESGGNHIA-DLKKEIEILRNLYHENIVKYKGICT------EDGGNGIKL 90
Query: 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592
++E + +GSL++YL K K+ + Q++ + +G+ +L + +L N+
Sbjct: 91 IMEFLPSGSLKEYLP--KNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNV 145
Query: 593 LLDKALTAKLSGYNI 607
L++ K+ + +
Sbjct: 146 LVESEHQVKIGDFGL 160
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 451 NNFDPTNLIGEG--SQGQLYKGFLTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKLRH 506
N+ IG+G ++ +L + LT G V++K + Q + Q L + V ++ L H
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V + + T T++L++E+ S G + DYL + + + I+
Sbjct: 74 PNIVKLF--------EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 125
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606
A VQ+ H I +LK EN+LLD + K++ +
Sbjct: 126 A---VQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFG 159
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 67 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 114
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R+TL
Sbjct: 115 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL 167
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 28/161 (17%)
Query: 457 NLIGEGSQGQLYKG-FLTDGSRVSVK-CLKLKQ----RHLPQSLMQHVELLSKLRHRHLV 510
++G G G ++KG ++ +G + + C+K+ + R Q++ H+ + L H H+V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK----KDMLKWPQRMAIIIG 566
+LG C GS++ LV +++ GSL D++ + + +L W ++A
Sbjct: 97 RLLGLC---------PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIA---- 143
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ +L G+ NL N+LL +++ + +
Sbjct: 144 --KGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGV 179
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 498 VELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKW 557
+E L LRH+H+ L H + T + +F+VLE+ G L DY+ +D L
Sbjct: 59 IEALKNLRHQHICQ-LYHVL-------ETANKIFMVLEYCPGGELFDYII---SQDRLSE 107
Query: 558 PQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTL 617
+ + V ++H+ G +LK EN+L D+ KL + L +K +
Sbjct: 108 EETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFG--LCAKPKGNK 162
Query: 618 SFH 620
+H
Sbjct: 163 DYH 165
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLK------LKQRHLPQSLMQHVELLS 502
A +F+ +G+G G +Y + R + LK L++ + L + VE+ S
Sbjct: 3 ALEDFEIGRPLGKGKFGNVY--LAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
LRH +++ + G+ + + V+L+LE+ G++ L K D QR A
Sbjct: 61 HLRHPNILRLYGYF--------HDATRVYLILEYAPLGTVYRELQKLSKFD----EQRTA 108
Query: 563 IIIGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R TL
Sbjct: 109 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 163
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 451 NNFDPTNLIGEG--SQGQLYKGFLTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKLRH 506
N+ IG+G ++ +L + LT G V++K + Q + Q L + V ++ L H
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 70
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V + + T T++L++E+ S G + DYL + + + I+
Sbjct: 71 PNIVKLF--------EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 122
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606
A VQ+ H I +LK EN+LLD + K++ +
Sbjct: 123 A---VQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFG 156
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 32/158 (20%)
Query: 453 FDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ---SLMQHVELLSKLRHRHL 509
+DPTN +G+ G V+VK LK PQ Q +++L L H H+
Sbjct: 35 YDPTN---DGT-----------GEMVAVKALKADCG--PQHRSGWKQEIDILRTLYHEHI 78
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
+ G C +D ++ LV+E++ GSLRDYL + + Q +
Sbjct: 79 IKYKGCC----EDQGE--KSLQLVMEYVPLGSLRDYLP----RHSIGLAQLLLFAQQICE 128
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ +LH+ NL N+LLD K+ + +
Sbjct: 129 GMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGL 163
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 19/133 (14%)
Query: 462 GSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521
G GQL++ + V +K L R+ +S + ++SKL H+HLV G C
Sbjct: 33 GDYGQLHE------TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCF---- 82
Query: 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG 581
G LV E + GSL YL K K+ + ++ + + FL
Sbjct: 83 ----CGDENILVQEFVKFGSLDTYLK--KNKNCINILWKLEVAKQLAWAMHFLEENT--- 133
Query: 582 IFGNNLKTENILL 594
+ N+ +NILL
Sbjct: 134 LIHGNVCAKNILL 146
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 28/206 (13%)
Query: 425 PQTMRSAAIGLPPFRGFSLEEIEE------ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV 478
PQ + SA P S ++ EE A +F+ +G+G G +Y +
Sbjct: 2 PQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFI 61
Query: 479 -SVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
++K L +L++ + L + VE+ S LRH +++ + G+ + D + V+L+L
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY----FHD----ATRVYLIL 113
Query: 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA-TRGVQFLHTGVAPGIFGNNLKTENIL 593
E+ G++ L K D QR A I + + H+ + ++K EN+L
Sbjct: 114 EYAPLGTVYRELQKLSKFDE----QRTATYITELANALSYCHSK---RVIHRDIKPENLL 166
Query: 594 LDKALTAKLS--GYNIPLPSKVRNTL 617
L A K++ G+++ PS R TL
Sbjct: 167 LGSAGELKIADFGWSVHAPSSRRTTL 192
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 62 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYL 111
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK EN+L++ KL+ + +
Sbjct: 112 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGL 151
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 28/161 (17%)
Query: 457 NLIGEGSQGQLYKG-FLTDGSRVSVK-CLKLKQ----RHLPQSLMQHVELLSKLRHRHLV 510
++G G G ++KG ++ +G + + C+K+ + R Q++ H+ + L H H+V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK----KDMLKWPQRMAIIIG 566
+LG C GS++ LV +++ GSL D++ + + +L W ++A
Sbjct: 79 RLLGLC---------PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIA---- 125
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ +L G+ NL N+LL +++ + +
Sbjct: 126 --KGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGV 161
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 61 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYL 110
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK EN+L++ KL+ + +
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGL 150
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 68 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 115
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R TL
Sbjct: 116 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL 168
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 69 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 116
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R TL
Sbjct: 117 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 169
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 83 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 130
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R TL
Sbjct: 131 ITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 183
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 66 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 113
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R TL
Sbjct: 114 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 166
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 69 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 116
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R TL
Sbjct: 117 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL 169
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 14/149 (9%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G + G V+VK +K + Q + + KL H LV G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV 578
Y +++V E+ISNG L +YL K L+ Q + + G+ FL +
Sbjct: 75 EY--------PIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLES-- 122
Query: 579 APGIFGNNLKTENILLDKALTAKLSGYNI 607
+L N L+D+ L K+S + +
Sbjct: 123 -HQFIHRDLAARNCLVDRDLCVKVSDFGM 150
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 71 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 118
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R TL
Sbjct: 119 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 448 EATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSK 503
E NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKE 65
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
L H ++V +L D +T + ++LV E + L+ ++ D + P +
Sbjct: 66 LNHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSY 115
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ +G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 116 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 156
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + + V+L+LE+ G++ L K D QR A
Sbjct: 65 RHPNILRLYGYF--------HDATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 112
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R TL
Sbjct: 113 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 165
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 459 IGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
IGEGS G + G +V+VK + L+++ + L V ++ H ++V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
+ G +++V+E + G+L D +T + + Q + + R + +LH
Sbjct: 113 V--------GDELWVVMEFLEGGALTDIVTHTRMNE----EQIATVCLSVLRALSYLHN- 159
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYN 606
G+ ++K+++ILL KLS +
Sbjct: 160 --QGVIHRDIKSDSILLTSDGRIKLSDFG 186
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 446 IEEATNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRH---LPQSLMQHVELL 501
I E +F NL+G+GS +Y+ + G V++K + K + + Q + V++
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 502 SKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
+L+H ++ + + ++D + V+LVLE NG + YL + K +
Sbjct: 66 CQLKHPSILELYNY----FED----SNYVYLVLEMCHNGEMNRYLKNRVKP--FSENEAR 115
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKV 613
+ G+ +LH+ GI +L N+LL + + K++ + + K+
Sbjct: 116 HFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + + V+L+LE+ G++ L K D QR A
Sbjct: 69 RHPNILRLYGYF--------HDATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 116
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R TL
Sbjct: 117 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 169
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 22/158 (13%)
Query: 462 GSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSK--LRHRHLVSILGHCILT 519
G G ++K L + V+VK L+ + QS E+ S ++H +L+ I
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDK---QSWQSEREIFSTPGMKHENLLQF----IAA 77
Query: 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH---- 575
+ N ++L+ GSL DYL K +++ W + + +RG+ +LH
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVP 133
Query: 576 ----TGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609
G P I + K++N+LL LTA L+ + + +
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAV 171
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 448 EATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSK 503
E NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKE 65
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
L H ++V +L D +T + ++LV E + L+ ++ D + P +
Sbjct: 66 LNHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSY 115
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ +G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 116 LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 156
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + + V+L+LE+ G++ L K D QR A
Sbjct: 67 RHPNILRLYGYF--------HDATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 114
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTLS 618
I + + H+ + ++K EN+LL A K++ G++ PS R TLS
Sbjct: 115 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS 168
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + + V+L+LE+ G++ L K D QR A
Sbjct: 70 RHPNILRLYGYF--------HDATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 117
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R TL
Sbjct: 118 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 170
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 71 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 118
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R TL
Sbjct: 119 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 171
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT 568
L +L I+T D + V L+LE +S G L D+L +K+ L + + I
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLA---QKESLSEEEATSFIKQIL 125
Query: 569 RGVQFLHTGVAPGIFGNNLKTENI-LLDKALTAKLSGYNIPLP 610
GV +LHT I +LK ENI LLDK NIP+P
Sbjct: 126 DGVNYLHT---KKIAHFDLKPENIMLLDK---------NIPIP 156
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVEL 500
SL++ E + + +G G G++Y+G S V+VK LK + + ++ +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 60
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
+ +++H +LV +LG C ++ P ++++E ++ G+L DYL + ++++
Sbjct: 61 MKEIKHPNLVQLLGVCT---REPP-----FYIIIEFMTYGNLLDYLRECNRQEV 106
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 39/171 (22%)
Query: 459 IGEGSQGQLYKGFL------TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G+++ D V+VK LK + + + ELL+ L+H H+V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL----------------TDWKKKDMLK 556
G C+ G + +V E++ +G L +L T+ + ML
Sbjct: 81 YGVCV--------EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 557 WPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
Q++A + F+H +L T N L+ + L K+ + +
Sbjct: 133 IAQQIAAGMVYLASQHFVH---------RDLATRNCLVGENLLVKIGDFGM 174
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 95
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E++ GSLRDYL ++ D +K Q + I +G+++L T +L T NIL
Sbjct: 96 EYLPYGSLRDYLQAHAERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 149
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 150 VENENRVKIGDFGL 163
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 452 NFDPTNLIGEG--SQGQLYKGFLTDGSRVSVKCLKLKQRHLP--QSLMQHVELLSKLRHR 507
N+ IG+G ++ +L + LT G V+VK + Q + Q L + V + L H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
++V + + T T++LV E+ S G + DYL + + + I+ A
Sbjct: 74 NIVKLF--------EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSA 125
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
VQ+ H I +LK EN+LLD K++ +
Sbjct: 126 ---VQYCHQKF---IVHRDLKAENLLLDADXNIKIADF 157
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 29/167 (17%)
Query: 459 IGEGSQGQLYKGFL------TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G+++ D V+VK LK Q + ELL+ L+H+H+V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLT----DWK----KKDMLKWP----QR 560
G C G + +V E++ +G L +L D K +D+ P Q
Sbjct: 80 FGVC--------TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 131
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+A+ G+ +L +L T N L+ + L K+ + +
Sbjct: 132 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM 175
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 29/167 (17%)
Query: 459 IGEGSQGQLYKGFL------TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G+++ D V+VK LK Q + ELL+ L+H+H+V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLT----DWK----KKDMLKWP----QR 560
G C G + +V E++ +G L +L D K +D+ P Q
Sbjct: 109 FGVC--------TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+A+ G+ +L +L T N L+ + L K+ + +
Sbjct: 161 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM 204
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 29/167 (17%)
Query: 459 IGEGSQGQLYKGFL------TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G+++ D V+VK LK Q + ELL+ L+H+H+V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLT----DWK----KKDMLKWP----QR 560
G C G + +V E++ +G L +L D K +D+ P Q
Sbjct: 86 FGVC--------TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 137
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+A+ G+ +L +L T N L+ + L K+ + +
Sbjct: 138 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM 181
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 60 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYL 109
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 28/206 (13%)
Query: 425 PQTMRSAAIGLPPFRGFSLEEIEE------ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV 478
PQ + SA P S ++ EE A +F+ +G+G G +Y +
Sbjct: 2 PQPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFI 61
Query: 479 -SVKCL---KLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
++K L +L++ + L + VE+ S LRH +++ + G+ + + V+L+L
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF--------HDATRVYLIL 113
Query: 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA-TRGVQFLHTGVAPGIFGNNLKTENIL 593
E+ G++ L K D QR A I + + H+ + ++K EN+L
Sbjct: 114 EYAPLGTVYRELQKLSKFDE----QRTATYITELANALSYCHSK---RVIHRDIKPENLL 166
Query: 594 LDKALTAKLS--GYNIPLPSKVRNTL 617
L A K++ G+++ PS R+ L
Sbjct: 167 LGSAGELKIADFGWSVHAPSSRRDDL 192
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 62 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYL 111
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 112 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 151
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 60 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYL 109
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 63 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYL 112
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 60 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYL 109
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 61 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYL 110
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 150
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G++++G G V+VK ++ +S + E+ + RH +ILG
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRH-ENILGFIAA 104
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDW--KKKDMLKWPQRMAIIIGATRGVQFLHT 576
+D+ T + ++LV ++ +GSL DYL + + M+K + + G+ LH
Sbjct: 105 DNKDN-GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASGLAHLHM 157
Query: 577 GVA-----PGIFGNNLKTENILLDK 596
+ P I +LK++NIL+ K
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKK 182
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 63 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYL 112
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 62 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYL 111
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 112 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 151
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 60 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYL 109
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 110 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 64 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYL 113
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 114 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 153
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G++++G G V+VK ++ +S + E+ + RH +ILG
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRH-ENILGFIAA 66
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDW--KKKDMLKWPQRMAIIIGATRGVQFLHT 576
+D+ T + ++LV ++ +GSL DYL + + M+K + + G+ LH
Sbjct: 67 DNKDN-GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASGLAHLHM 119
Query: 577 GVA-----PGIFGNNLKTENILLDK 596
+ P I +LK++NIL+ K
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKK 144
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRH 506
NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 61 PNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQ 110
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRH 506
NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 62 PNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQ 111
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + + V+L+LE+ G + L K D QR A
Sbjct: 71 RHPNILRLYGYF--------HDATRVYLILEYAPRGEVYKELQKLSKFD----EQRTATY 118
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R L
Sbjct: 119 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 171
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 63 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKTFM-DASALTGIPLPLIKSYL 112
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 152
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRH 506
NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 61 PNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQ 110
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKL 504
+ NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
H ++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 61 NHPNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYL 110
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 150
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRH 506
NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 62 PNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQ 111
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 112 LLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G++++G G V+VK ++ +S + E+ + RH +ILG
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRH-ENILGFIAA 65
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDW--KKKDMLKWPQRMAIIIGATRGVQFLHT 576
+D+ T + ++LV ++ +GSL DYL + + M+K + + G+ LH
Sbjct: 66 DNKDN-GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASGLAHLHM 118
Query: 577 GVA-----PGIFGNNLKTENILLDK 596
+ P I +LK++NIL+ K
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKK 143
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRH 506
NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 61 PNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQ 110
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRH 506
NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 61 PNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQ 110
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRH 506
NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 66 PNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQ 115
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 116 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 153
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVEL 500
S+++ E + + +G G G++Y G S V+VK LK + + ++ +
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAV 81
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
+ +++H +LV +LG C L ++V E++ G+L DYL + ++++
Sbjct: 82 MKEIKHPNLVQLLGVCTLE--------PPFYIVTEYMPYGNLLDYLRECNREEV 127
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 475 GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534
G V+VK L+ + + +E+L L+H ++V G C + + L++
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC------YSAGRRNLKLIM 95
Query: 535 EHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593
E + GSLR+YL K++ D +K Q + I +G+++L T +L T NIL
Sbjct: 96 EFLPYGSLREYLQKHKERIDHIKLLQYTSQI---CKGMEYLGT---KRYIHRDLATRNIL 149
Query: 594 LDKALTAKLSGYNI 607
++ K+ + +
Sbjct: 150 VENENRVKIGDFGL 163
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRH 506
NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 62 PNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQ 111
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRH 506
NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 63 PNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQ 112
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 150
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRH 506
NF IGEG+ G +YK LT G V++K ++L + +P + ++ + LL +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 62 PNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQ 111
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G++++G G V+VK ++ +S + E+ + RH +ILG
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRH-ENILGFIAA 91
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDW--KKKDMLKWPQRMAIIIGATRGVQFLHT 576
+D+ T + ++LV ++ +GSL DYL + + M+K + + G+ LH
Sbjct: 92 DNKDN-GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASGLAHLHM 144
Query: 577 GVA-----PGIFGNNLKTENILLDK 596
+ P I +LK++NIL+ K
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKK 169
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G++++G G V+VK ++ +S + E+ + RH +ILG
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRH-ENILGFIAA 68
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDW--KKKDMLKWPQRMAIIIGATRGVQFLHT 576
+D+ T + ++LV ++ +GSL DYL + + M+K + + G+ LH
Sbjct: 69 DNKDN-GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASGLAHLHM 121
Query: 577 GVA-----PGIFGNNLKTENILLDK 596
+ P I +LK++NIL+ K
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKK 146
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG+G G++++G G V+VK ++ +S + E+ + RH +ILG
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRH-ENILGFIAA 71
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDW--KKKDMLKWPQRMAIIIGATRGVQFLHT 576
+D+ T + ++LV ++ +GSL DYL + + M+K + + G+ LH
Sbjct: 72 DNKDN-GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK------LALSTASGLAHLHM 124
Query: 577 GVA-----PGIFGNNLKTENILLDK 596
+ P I +LK++NIL+ K
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKK 149
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P ++++E ++ G+L DYL + ++++
Sbjct: 85 ---REPP-----FYIIIEFMTYGNLLDYLRECNRQEV 113
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + + V+L+LE+ G++ L K D QR A
Sbjct: 69 RHPNILRLYGYF--------HDATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 116
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R+ L
Sbjct: 117 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL 169
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 75/157 (47%), Gaps = 18/157 (11%)
Query: 453 FDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVS 511
FD +GEGS G +YK + G V++K + ++ Q +++ + ++ + H+V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVK 88
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGAT-RG 570
G + +++V+E+ GS+ D + + ++ +A I+ +T +G
Sbjct: 89 YYGSYF--------KNTDLWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQSTLKG 137
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+++LH ++K NILL+ AKL+ + +
Sbjct: 138 LEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGV 171
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P ++++E ++ G+L DYL + ++++
Sbjct: 81 ---REPP-----FYIIIEFMTYGNLLDYLRECNRQEV 109
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 33/170 (19%)
Query: 448 EATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSV--KCLKLKQRHLPQSL-MQHVELLSKL 504
++ ++ L+GEGS G + K D R+ K L+ + + + M+ ++LL +L
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 505 RHRHLVSILGHC--------ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLK 556
RH +LV++L C + + DH T+ LE NG L
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDH-----TILDDLELFPNG--------------LD 122
Query: 557 WPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606
+ + G+ F H+ I ++K ENIL+ ++ KL +
Sbjct: 123 YQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFG 169
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVE 499
SL++ E + + +G G G++Y+G S V+VK LK + + ++
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAA 59
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ +++H +LV +LG C ++ P +++ E ++ G+L DYL + ++++
Sbjct: 60 VMKEIKHPNLVQLLGVCT---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 106
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 66 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 113
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R L
Sbjct: 114 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL 166
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P ++++E ++ G+L DYL + ++++
Sbjct: 80 ---REPP-----FYIIIEFMTYGNLLDYLRECNRQEV 108
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ ++V+VK +K + ++ + ++ L+H LV + H ++
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKL--HAVV 79
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYL-TDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
T + ++++ E ++ GSL D+L +D K L P+ + G+ F+
Sbjct: 80 TKE-------PIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR 130
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ +L K++ + +
Sbjct: 131 ---NYIHRDLRAANILVSASLVCKIADFGL 157
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 67 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 114
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R L
Sbjct: 115 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 167
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 208 GPKFPSLSK--NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPS 265
GP P+++K + + + + ++ IP L L D S N G + + SLP+
Sbjct: 91 GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150
Query: 266 ILYLNLAGNQLSEALPVNISCSAKL-NFVEISHNLLIGKLP 305
++ + GN++S A+P + +KL + IS N L GK+P
Sbjct: 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP 191
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 232 IPSGLKNFDQLKQFDISS-NNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKL 290
IPS L N L I NN VGPI + L + YL + +S A+P +S L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 291 NFVEISHNLLIGKLPSCIGS 310
++ S+N L G LP I S
Sbjct: 128 VTLDFSYNALSGTLPPSISS 147
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 153 LNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDL---QRLVXXXXXXXXXXDFGP 209
+ IS N + G+IP +L NL + L+ N+L G L + F
Sbjct: 179 MTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237
Query: 210 KFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI 256
LSKN+ + LRNN + +P GL L ++S NN G I
Sbjct: 238 GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 99/288 (34%), Gaps = 79/288 (27%)
Query: 31 PSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNS----RVTELTVIGNK 86
P + + L Q++K L P L W T+ C + + L ++C RV L + G
Sbjct: 5 PQDKQALLQIKKDLGNPTTLSSWLPTTDCC---NRTWLGVLCDTDTQTYRVNNLDLSG-- 59
Query: 87 SSPAHSPKPTFGKFSASQQSLSANFNIDRFFTIXXXXXXXXXXXXXXXXXXXXXXXKINR 146
+ PKP S AN F I I +
Sbjct: 60 ---LNLPKP------YPIPSSLANLPYLNFLYIGGINNLVGPIPP-----------AIAK 99
Query: 147 FWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVXXXXXXXXXXD 206
L L I+ + G IP ++ +K L ++ + N L+G++P
Sbjct: 100 LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLP----------------- 142
Query: 207 FGPKFPSLSK--NIVSVILRNNSLRSEIPSGLKNFDQL-KQFDISSNNFVGPIQSFLFSL 263
PS+S N+V + N + IP +F +L IS N G I
Sbjct: 143 -----PSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP------ 191
Query: 264 PSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSN 311
P+ LNLA FV++S N+L G GS+
Sbjct: 192 PTFANLNLA-------------------FVDLSRNMLEGDASVLFGSD 220
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 255 PIQSFLFSLPSILYLNLAG-NQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313
PI S L +LP + +L + G N L +P I+ +L+++ I+H + G +P +
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 314 NRTVVSTWNCLSGV 327
T+ ++N LSG
Sbjct: 127 LVTLDFSYNALSGT 140
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 69 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 116
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R L
Sbjct: 117 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 169
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + + ++K L +L++ + L + VE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + + V+L+LE+ G++ L K D QR A
Sbjct: 66 RHPNILRLYGYF--------HDSTRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 113
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R L
Sbjct: 114 ITELANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 166
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P ++++E ++ G+L DYL + ++++
Sbjct: 80 ---REPP-----FYIIIEFMTYGNLLDYLRECNRQEV 108
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHC 516
IG GS G +YKG V+VK LK+ Q+ V +L K RH +++ +G+
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
T + +V + SL +L + K + Q + I +G+ +LH
Sbjct: 102 ---------TKDNLAIVTQWCEGSSLYKHLHVQETK--FQMFQLIDIARQTAQGMDYLH- 149
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A I ++K+ NI L + LT K+ + +
Sbjct: 150 --AKNIIHRDMKSNNIFLHEGLTVKIGDFGL 178
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 66 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 113
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R L
Sbjct: 114 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 166
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 66 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 113
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R L
Sbjct: 114 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 166
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 459 IGEGSQGQL-YKGFLTDGSRVSVKCLK---LKQRHLPQSLMQHVELLSKLRHRHLVSILG 514
+GEGS G++ +V++K + LK+ + + + + L LRH H++ +
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLY- 75
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFL 574
D T + + +V+E+ + G L DY+ + K+ + + II A +++
Sbjct: 76 -------DVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA---IEYC 124
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
H I +LK EN+LLD L K++ + +
Sbjct: 125 HRH---KIVHRDLKPENLLLDDNLNVKIADFGL 154
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 21/123 (17%)
Query: 488 RHLPQSLMQHVELLSKLRHRHLVSILGH-CILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+ L ++ ++ V++L K + GH I+ +D T + FLV + + G L DYL
Sbjct: 51 QELREATLKEVDILRK--------VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 102
Query: 547 TD---WKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
T+ +K+ K + + +I A + +H +LK ENILLD + KL+
Sbjct: 103 TEKVTLSEKETRKIMRALLEVICALHKLNIVH---------RDLKPENILLDDDMNIKLT 153
Query: 604 GYN 606
+
Sbjct: 154 DFG 156
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 68 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 115
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R L
Sbjct: 116 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 168
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + + V+L+LE+ G++ L K D QR A
Sbjct: 66 RHPNILRLYGYF--------HDATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 113
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R L
Sbjct: 114 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL 166
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + + V+L+LE+ G++ L K D QR A
Sbjct: 66 RHPNILRLYGYF--------HDATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 113
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R L
Sbjct: 114 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL 166
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + D + V+L+LE+ G++ L K D QR A
Sbjct: 71 RHPNILRLYGY----FHD----ATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 118
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R L
Sbjct: 119 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 171
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 21/157 (13%)
Query: 462 GSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLS--KLRHRHLVSILGHCILT 519
G G ++K L + V+VK ++ + QS E+ S ++H +++ +G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDK---QSWQNEYEVYSLPGMKHENILQFIG----A 86
Query: 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT--- 576
+ + ++L+ GSL D+L K +++ W + I RG+ +LH
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIP 142
Query: 577 ----GVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609
G P I ++K++N+LL LTA ++ + + L
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 21/124 (16%)
Query: 488 RHLPQSLMQHVELLSKLRHRHLVSILGH-CILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+ L ++ ++ V++L K + GH I+ +D T + FLV + + G L DYL
Sbjct: 64 QELREATLKEVDILRK--------VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 115
Query: 547 TD---WKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
T+ +K+ K + + +I A + +H +LK ENILLD + KL+
Sbjct: 116 TEKVTLSEKETRKIMRALLEVICALHKLNIVH---------RDLKPENILLDDDMNIKLT 166
Query: 604 GYNI 607
+
Sbjct: 167 DFGF 170
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 21/124 (16%)
Query: 488 RHLPQSLMQHVELLSKLRHRHLVSILGH-CILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+ L ++ ++ V++L K + GH I+ +D T + FLV + + G L DYL
Sbjct: 64 QELREATLKEVDILRK--------VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 115
Query: 547 TD---WKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603
T+ +K+ K + + +I A + +H +LK ENILLD + KL+
Sbjct: 116 TEKVTLSEKETRKIMRALLEVICALHKLNIVH---------RDLKPENILLDDDMNIKLT 166
Query: 604 GYNI 607
+
Sbjct: 167 DFGF 170
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 457 NLIGEGSQGQLY--KGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILG 514
++G G+ +++ K LT G ++KC+K SL + +L K++H ++V++
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTL-- 71
Query: 515 HCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD---WKKKDMLKWPQRMAIIIGATRGV 571
+D + + +LV++ +S G L D + + + +KD +I V
Sbjct: 72 ------EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDA------SLVIQQVLSAV 119
Query: 572 QFLHTGVAPGIFGNNLKTENIL 593
++LH GI +LK EN+L
Sbjct: 120 KYLHEN---GIVHRDLKPENLL 138
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + + V+L+LE+ G++ L K D QR A
Sbjct: 66 RHPNILRLYGYF--------HDATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 113
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R L
Sbjct: 114 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 166
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 22/176 (12%)
Query: 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKL 504
A +F+ +G+G G +Y + ++K L +L++ + L + VE+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
RH +++ + G+ + + V+L+LE+ G++ L K D QR A
Sbjct: 69 RHPNILRLYGYF--------HDATRVYLILEYAPLGTVYRELQKLSKFD----EQRTATY 116
Query: 565 IGA-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
I + + H+ + ++K EN+LL A K++ G+++ PS R L
Sbjct: 117 ITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL 169
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 287 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 315
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 81 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 109
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 85 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 113
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 85 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 113
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 19/166 (11%)
Query: 452 NFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
+F LIG G GQ++K DG +K +K + + V+ L+KL H ++V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIV 67
Query: 511 SILGHCILTYQDHPNTGST---------VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM 561
G C + P T S +F+ +E G+L ++ + ++ + L +
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLAL 125
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ T+GV ++H + + +LK NI L K+ + +
Sbjct: 126 ELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 84 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 112
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVE 499
SL++ E + + +G G G++Y+G S V+VK LK + + ++
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAA 59
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ +++H +LV +LG C ++ P +++ E ++ G+L DYL + ++++
Sbjct: 60 VMKEIKHPNLVQLLGVCT---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 106
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLY--------KGFLTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ K + V+VK LK ++ L L+ +E++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 102 NIITLLGACT---QDGP-----LYVIVEYASKGNLREYL 132
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 80 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 108
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 80 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 108
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Query: 445 EIEEATNNFDPTNL------IGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQH 497
E E + DP + +G+G+ G++YK + G+ + K ++ K + +
Sbjct: 7 EYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVE 66
Query: 498 VELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKW 557
+E+L+ H ++V +LG Y D +++++E G++ + + + L
Sbjct: 67 IEILATCDHPYIVKLLG---AYYHD-----GKLWIMIEFCPGGAVDAIMLELDRG--LTE 116
Query: 558 PQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
PQ + + FLH+ I +LK N+L+ +L+ + +
Sbjct: 117 PQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGV 163
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 85 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 113
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 85 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 113
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 82 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 110
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 93 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 121
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 80 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 108
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ ++V+VK +K + ++ + ++ L+H LV + H ++
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKL--HAVV 252
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYL-TDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
T + ++++ E ++ GSL D+L +D K L P+ + G+ F+
Sbjct: 253 TKE-------PIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR 303
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ +L K++ + +
Sbjct: 304 ---NYIHRDLRAANILVSASLVCKIADFGL 330
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 80 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 108
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 82 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 110
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 284 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 312
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
+G G G+++ ++V+VK +K + ++ + ++ L+H LV + H ++
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKL--HAVV 246
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYL-TDWKKKDMLKWPQRMAIIIGATRGVQFLHTG 577
T + ++++ E ++ GSL D+L +D K L P+ + G+ F+
Sbjct: 247 TKE-------PIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR 297
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+L+ NIL+ +L K++ + +
Sbjct: 298 ---NYIHRDLRAANILVSASLVCKIADFGL 324
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 22/174 (12%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKLRH 506
+FD +G+G G +Y + ++K L +L++ + L + VE+ S LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
+++ + G+ + + V+L+LE+ G++ L + D QR A I
Sbjct: 72 PNILRLYGYF--------HDATRVYLILEYAPLGTVYRELQKLSRFD----EQRTATYIT 119
Query: 567 A-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
+ + H+ + ++K EN+LL K++ G+++ PS R+TL
Sbjct: 120 ELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTL 170
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRH 506
NF IGEG+ G +YK LT G V++ ++L + +P + ++ + LL +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 62 PNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQ 111
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGF--LTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRH 506
NF IGEG+ G +YK LT G V++ ++L + +P + ++ + LL +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
++V +L D +T + ++LV E + L+ ++ D + P + +
Sbjct: 61 PNIVKLL--------DVIHTENKLYLVFEFLHQ-DLKKFM-DASALTGIPLPLIKSYLFQ 110
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ F H+ + +LK +N+L++ KL+ + +
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 148
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLY--------KGFLTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ K + V+VK LK ++ L L+ +E++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 102 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 132
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLY--------KGFLTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ K + V+VK LK ++ L L+ +E++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 102 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 132
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLYK----GFLTDGSR----VSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ G D + V+VK LK ++ L L+ +E++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 102 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 132
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLY--------KGFLTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ K + V+VK LK ++ L L+ +E++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 102 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 132
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
+GEG+ G +YK + G V++K ++L + +P + ++ + LL +L H ++VS++
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI--- 85
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
D ++ + LV E + L+ L + K L+ Q + RGV H
Sbjct: 86 -----DVIHSERCLTLVFEFMEK-DLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
I +LK +N+L++ KL+ + +
Sbjct: 138 H---RILHRDLKPQNLLINSDGALKLADFGL 165
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 326 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 354
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLYK----GFLTDG----SRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ G D ++V+VK LK ++ L L+ +E++ + +H+
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL-SDLISEMEMMKMIGKHK 135
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 136 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 166
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKL--KQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
+GEG+ G +YK + G V++K ++L + +P + ++ + LL +L H ++VS++
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLI--- 85
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
D ++ + LV E + L+ L + K L+ Q + RGV H
Sbjct: 86 -----DVIHSERCLTLVFEFMEK-DLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 577 GVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
I +LK +N+L++ KL+ + +
Sbjct: 138 H---RILHRDLKPQNLLINSDGALKLADFGL 165
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 459 IGEGSQGQLYKGFLTDGS-RVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCI 517
+G G G++Y+G S V+VK LK + + ++ ++ +++H +LV +LG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ P +++ E ++ G+L DYL + ++++
Sbjct: 82 ---REPP-----FYIITEFMTYGNLLDYLRECNRQEV 110
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 457 NLIGEGSQGQLYKGFLTDGSR-----VSVKCLKL----KQRHLPQSLMQHVELLSKLRHR 507
+IG G G++YKG L S V++K LK KQR + ++ + H
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR---VDFLGEAGIMGQFSHH 106
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA 567
+++ + G I Y+ + ++ E++ NG+L +L + K Q + ++ G
Sbjct: 107 NIIRLEG-VISKYK-------PMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGI 156
Query: 568 TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+++L +L NIL++ L K+S + +
Sbjct: 157 AAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGL 193
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 18/98 (18%)
Query: 459 IGEGSQGQLYK----GFLTDGSR----VSVKCLKLKQRHLPQS-LMQHVELLSKL-RHRH 508
+GEG+ GQ+ G D + V+VK LK S L+ +E++ + +H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 103 IINLLGACT---QDGP-----LYVIVEYASKGNLREYL 132
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
++F+ ++G+G+ GQ+ K D ++K ++ + L +++ V LL+ L H++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLASLNHQY 63
Query: 509 LVSILGHCILTYQD--HPNTG----STVFLVLEHISNGSLRDYL--TDWKKKDMLKWPQR 560
+V L ++ P T ST+F+ +E+ NG+L D + + ++ W
Sbjct: 64 VVRYYA-AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
I+ + ++H+ GI +LK NI +D++ K+ + +
Sbjct: 123 RQIL----EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGL 162
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLYK----GFLTDG----SRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ G D ++V+VK LK ++ L L+ +E++ + +H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL-SDLISEMEMMKMIGKHK 94
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 95 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 125
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLY--------KGFLTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG GQ+ K + V+VK LK ++ L L+ +E++ + +H+
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 147
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 148 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 178
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM---QHVELLSKLRHRHLVSILGH 515
IG GS G +YKG V+VK L + PQ L V +L K RH +++ +G+
Sbjct: 16 IGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFL 574
+T + +V + SL +L + K +M+K + I +G+ +L
Sbjct: 73 ---------STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYL 120
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
H A I +LK+ NI L + LT K+ + +
Sbjct: 121 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGL 150
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
++G G+ G + K V++K ++ + ++ + + LS++ H ++V + G C
Sbjct: 15 EVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
+ + V LV+E+ GSL + L + M+ + ++GV +LH+
Sbjct: 72 L----------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 121
Query: 577 GVAPGIFGNNLKTENILL 594
+ +LK N+LL
Sbjct: 122 MQPKALIHRDLKPPNLLL 139
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 66/172 (38%), Gaps = 38/172 (22%)
Query: 459 IGEGSQGQLYKGFL------TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G+++ D V+VK LK + + ELL+ L+H H+V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV- 571
G C G + +V E++ +G L +L P M ++ G R
Sbjct: 83 YGVC--------GDGDPLIMVFEYMKHGDLNKFLR-------AHGPDAMILVDGQPRQAK 127
Query: 572 ------QFLHTG--VAPGI--------FGNNLKTENILLDKALTAKLSGYNI 607
Q LH +A G+ +L T N L+ L K+ + +
Sbjct: 128 GELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGM 179
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLYK----GFLTDG----SRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ G D ++V+VK LK ++ L L+ +E++ + +H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL-SDLISEMEMMKMIGKHK 94
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 95 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 125
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKLRH 506
+FD +G+G G +Y + ++K L +L++ + L + VE+ S LRH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
+++ + G+ + + V+L+LE+ G++ L + D QR A I
Sbjct: 72 PNILRLYGYF--------HDATRVYLILEYAPLGTVYRELQKLSRFD----EQRTATYIT 119
Query: 567 A-TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS--GYNIPLPSKVRNTL 617
+ + H+ + ++K EN+LL K++ G+++ PS R TL
Sbjct: 120 ELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTL 170
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 24/158 (15%)
Query: 458 LIGEGSQGQLYKGFLT-DGSR---VSVKCLKL----KQRHLPQSLMQHVELLSKLRHRHL 509
+IG G G++ G L G R V++K LK+ KQR + + ++ + H ++
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQR---RDFLCEASIMGQFDHPNV 106
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATR 569
V + G ++T G V +V+E + NG+L +L K Q + ++ G
Sbjct: 107 VHLEG--VVT------RGKPVMIVIEFMENGALDAFLR--KHDGQFTVIQLVGMLRGIAA 156
Query: 570 GVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+++L G +L NIL++ L K+S + +
Sbjct: 157 GMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGL 191
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLYK----GFLTDG----SRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ G D ++V+VK LK ++ L L+ +E++ + +H+
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL-SDLISEMEMMKMIGKHK 86
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 87 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 117
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLY--------KGFLTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG GQ+ K + V+VK LK ++ L L+ +E++ + +H+
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 93
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 94 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 124
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLYK----GFLTDG----SRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ G D ++V+VK LK ++ L L+ +E++ + +H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL-SDLISEMEMMKMIGKHK 94
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 95 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 125
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLYK----GFLTDG----SRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ G D ++V+VK LK ++ L L+ +E++ + +H+
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL-SDLISEMEMMKMIGKHK 87
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 88 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 118
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+IG G G +Y G L D + C +K R + Q L + + ++ H +++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 153
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
S+LG C+ + + +VL ++ +G LR+++ + +K + + +G
Sbjct: 154 SLLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKG 204
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
++FL + +L N +LD+ T K++ + +
Sbjct: 205 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 238
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLY--------KGFLTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ K + V+VK LK ++ L L+ +E++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++ +LG C QD P +++++E+ S G+LR+YL
Sbjct: 102 NIIHLLGACT---QDGP-----LYVIVEYASKGNLREYL 132
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLYK----GFLTDG----SRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ G D ++V+VK LK ++ L L+ +E++ + +H+
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL-SDLISEMEMMKMIGKHK 83
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 84 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 114
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLYK----GFLTDG----SRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ G D ++V+VK LK ++ L L+ +E++ + +H+
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL-SDLISEMEMMKMIGKHK 79
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 80 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 110
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC 516
++G G+ G + K V++K +++ ++ + + LS++ H ++V + G C
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT 576
+ + V LV+E+ GSL + L + M+ + ++GV +LH+
Sbjct: 71 L----------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 577 GVAPGIFGNNLKTENILL 594
+ +LK N+LL
Sbjct: 121 MQPKALIHRDLKPPNLLL 138
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLYK----GFLTDG----SRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ G D ++V+VK LK ++ L L+ +E++ + +H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL-SDLISEMEMMKMIGKHK 94
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 95 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 125
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/166 (18%), Positives = 80/166 (48%), Gaps = 15/166 (9%)
Query: 448 EATNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVK--CLKLKQRHLPQSLMQHVELLSKL 504
+ + ++ IG+G+ G+++K G +V++K ++ ++ P + ++ +++L L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVL---EHISNGSLRDYLTDWKKKDMLKWPQRM 561
+H ++V+++ C + ++++LV EH G L + L + ++ + Q +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ ++H I ++K N+L+ + KL+ + +
Sbjct: 135 ------LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLY--------KGFLTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG GQ+ K + V+VK LK ++ L L+ +E++ + +H+
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 88
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 89 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 119
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 19/156 (12%)
Query: 458 LIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLVS 511
+IG G G +Y G L D + C +K R + Q L + + ++ H +++S
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLS 93
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
+LG C+ + + +VL ++ +G LR+++ + +K + + +G+
Sbjct: 94 LLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGM 144
Query: 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+FL + +L N +LD+ T K++ + +
Sbjct: 145 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 177
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLY--------KGFLTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG GQ+ K + V+VK LK ++ L L+ +E++ + +H+
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 90
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++E+ S G+LR+YL
Sbjct: 91 NIINLLGACT---QDGP-----LYVIVEYASKGNLREYL 121
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+IG G G +Y G L D + C +K R + Q L + + ++ H +++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 94
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
S+LG C+ + + +VL ++ +G LR+++ + +K + + +G
Sbjct: 95 SLLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKG 145
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
++FL + +L N +LD+ T K++ + +
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 179
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 447 EEATNNFDPTNL------IGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVE 499
E + DP + +G+G+ G++YK + G+ + K ++ K + + +E
Sbjct: 1 EHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE 60
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
+L+ H ++V +LG Y D +++++E G++ + + + L PQ
Sbjct: 61 ILATCDHPYIVKLLG---AYYHD-----GKLWIMIEFCPGGAVDAIMLELDRG--LTEPQ 110
Query: 560 RMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ + FLH+ I +LK N+L+ +L+ + +
Sbjct: 111 IQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGV 155
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 19/156 (12%)
Query: 458 LIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLVS 511
+IG G G +Y G L D + C +K R + Q L + + ++ H +++S
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLS 100
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
+LG C+ + + +VL ++ +G LR+++ + +K + + +G+
Sbjct: 101 LLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGM 151
Query: 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+FL + +L N +LD+ T K++ + +
Sbjct: 152 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 184
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 19/156 (12%)
Query: 458 LIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLVS 511
+IG G G +Y G L D + C +K R + Q L + + ++ H +++S
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLS 96
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
+LG C+ + + +VL ++ +G LR+++ + +K + + +G+
Sbjct: 97 LLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGM 147
Query: 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+FL + +L N +LD+ T K++ + +
Sbjct: 148 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 180
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 19/156 (12%)
Query: 458 LIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLVS 511
+IG G G +Y G L D + C +K R + Q L + + ++ H +++S
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLS 95
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
+LG C+ + + +VL ++ +G LR+++ + +K + + +G+
Sbjct: 96 LLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGM 146
Query: 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+FL + +L N +LD+ T K++ + +
Sbjct: 147 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 179
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 19/156 (12%)
Query: 458 LIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLVS 511
+IG G G +Y G L D + C +K R + Q L + + ++ H +++S
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVLS 96
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
+LG C+ + + +VL ++ +G LR+++ + +K + + +G+
Sbjct: 97 LLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGM 147
Query: 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+FL + +L N +LD+ T K++ + +
Sbjct: 148 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 180
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 20/152 (13%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM---QHVELLSKLRHRHLVSILGH 515
IG GS G +YKG V+VK L + PQ L V +L K RH +++ +G+
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
+T + +V + SL +L + K +K + + I RG+ +LH
Sbjct: 89 ---------STAPQLAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYLH 137
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A I +LK+ NI L + T K+ + +
Sbjct: 138 ---AKSIIHRDLKSNNIFLHEDNTVKIGDFGL 166
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM---QHVELLSKLRHRHLVSILGH 515
IG GS G +YKG V+VK L + PQ L V +L K RH +++ +G+
Sbjct: 21 IGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFL 574
+T + +V + SL +L + K +M+K + I +G+ +L
Sbjct: 78 ---------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYL 125
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
H A I +LK+ NI L + LT K+ + +
Sbjct: 126 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGL 155
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 16/150 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG GS G +YKG V + + Q+ V +L K RH +++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 72
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTG 577
+T + +V + SL +L + K +M+K + I +G+ +LH
Sbjct: 73 ------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLH-- 121
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A I +LK+ NI L + LT K+ + +
Sbjct: 122 -AKSIIHRDLKSNNIFLHEDLTVKIGDFGL 150
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 16/150 (10%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518
IG GS G +YKG V + + Q+ V +L K RH +++ +G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--- 72
Query: 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFLHTG 577
+T + +V + SL +L + K +M+K + I +G+ +LH
Sbjct: 73 ------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLH-- 121
Query: 578 VAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A I +LK+ NI L + LT K+ + +
Sbjct: 122 -AKSIIHRDLKSNNIFLHEDLTVKIGDFGL 150
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/166 (18%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 448 EATNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVK--CLKLKQRHLPQSLMQHVELLSKL 504
+ + ++ IG+G+ G+++K G +V++K ++ ++ P + ++ +++L L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVL---EHISNGSLRDYLTDWKKKDMLKWPQRM 561
+H ++V+++ C + +++LV EH G L + L + ++ + Q +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ ++H I ++K N+L+ + KL+ + +
Sbjct: 135 ------LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 44/195 (22%)
Query: 446 IEEATNNFDPTNLI-----GEGSQGQLYKG--FLTDG--SRVSVKCLKLKQRHLP---QS 493
+E+ F NL+ GEG G++ K F G +V LK+ P +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 494 LMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-- 551
L+ +L ++ H H++ + G C QD P + L++E+ GSLR +L + +K
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGAC---SQDGP-----LLLIVEYAKYGSLRGFLRESRKVG 124
Query: 552 -----------KDMLKWPQRMAIIIG--------ATRGVQFLHTGVAPGIFGNNLKTENI 592
L P A+ +G ++G+Q+L + +L NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNI 181
Query: 593 LLDKALTAKLSGYNI 607
L+ + K+S + +
Sbjct: 182 LVAEGRKMKISDFGL 196
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/166 (18%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 448 EATNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVK--CLKLKQRHLPQSLMQHVELLSKL 504
+ + ++ IG+G+ G+++K G +V++K ++ ++ P + ++ +++L L
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVL---EHISNGSLRDYLTDWKKKDMLKWPQRM 561
+H ++V+++ C + +++LV EH G L + L + ++ + Q +
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ ++H I ++K N+L+ + KL+ + +
Sbjct: 135 ------LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 171
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM---QHVELLSKLRHRHLVSILGH 515
IG GS G +YKG V+VK L + PQ L V +L K RH +++ +G+
Sbjct: 18 IGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFL 574
+T + +V + SL +L + K +M+K + I +G+ +L
Sbjct: 75 ---------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYL 122
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
H A I +LK+ NI L + LT K+ + +
Sbjct: 123 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGL 152
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/166 (18%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 448 EATNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVK--CLKLKQRHLPQSLMQHVELLSKL 504
+ + ++ IG+G+ G+++K G +V++K ++ ++ P + ++ +++L L
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 73
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVL---EHISNGSLRDYLTDWKKKDMLKWPQRM 561
+H ++V+++ C + +++LV EH G L + L + ++ + Q +
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 133
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
G+ ++H I ++K N+L+ + KL+ + +
Sbjct: 134 ------LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM---QHVELLSKLRHRHLVSILGH 515
IG GS G +YKG V+VK L + PQ L V +L K RH +++ +G+
Sbjct: 21 IGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFL 574
+T + +V + SL +L + K +M+K + I +G+ +L
Sbjct: 78 ---------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYL 125
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
H A I +LK+ NI L + LT K+ + +
Sbjct: 126 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGL 155
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 20/152 (13%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM---QHVELLSKLRHRHLVSILGH 515
IG GS G +YKG V+VK L + PQ L V +L K RH +++ +G+
Sbjct: 20 IGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
+T + +V + SL +L + K +K + + I RG+ +LH
Sbjct: 77 ---------STKPQLAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYLH 125
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A I +LK+ NI L + T K+ + +
Sbjct: 126 ---AKSIIHRDLKSNNIFLHEDNTVKIGDFGL 154
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM---QHVELLSKLRHRHLVSILGH 515
IG GS G +YKG V+VK L + PQ L V +L K RH +++ +G+
Sbjct: 36 IGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFL 574
+T + +V + SL +L + K +M+K + I +G+ +L
Sbjct: 93 ---------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYL 140
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
H A I +LK+ NI L + LT K+ + +
Sbjct: 141 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGL 170
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM---QHVELLSKLRHRHLVSILGH 515
IG GS G +YKG V+VK L + PQ L V +L K RH +++ +G+
Sbjct: 43 IGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFL 574
+T + +V + SL +L + K +M+K + I +G+ +L
Sbjct: 100 ---------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYL 147
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
H A I +LK+ NI L + LT K+ + +
Sbjct: 148 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGL 177
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+IG G G +Y G L D + C +K R + Q L + + ++ H +++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 93
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
S+LG C+ + + +VL ++ +G LR+++ + +K + + +G
Sbjct: 94 SLLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKG 144
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTLSFH 620
+++L + +L N +LD+ T K++ + + + S H
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVH 191
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+IG G G +Y G L D + C +K R + Q L + + ++ H +++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 86
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
S+LG C+ + + +VL ++ +G LR+++ + +K + + +G
Sbjct: 87 SLLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKG 137
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTLSFH 620
+++L + +L N +LD+ T K++ + + + S H
Sbjct: 138 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 184
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM---QHVELLSKLRHRHLVSILGH 515
IG GS G +YKG V+VK L + PQ L V +L K RH +++ +G+
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFL 574
+T + +V + SL +L + K +M+K + I +G+ +L
Sbjct: 101 ---------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYL 148
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
H A I +LK+ NI L + LT K+ + +
Sbjct: 149 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGL 178
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+IG G G +Y G L D + C +K R + Q L + + ++ H +++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 94
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
S+LG C+ + + +VL ++ +G LR+++ + +K + + +G
Sbjct: 95 SLLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKG 145
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTLSFH 620
+++L + +L N +LD+ T K++ + + + S H
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 192
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 44/195 (22%)
Query: 446 IEEATNNFDPTNLI-----GEGSQGQLYKG--FLTDG--SRVSVKCLKLKQRHLP---QS 493
+E+ F NL+ GEG G++ K F G +V LK+ P +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 494 LMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-- 551
L+ +L ++ H H++ + G C QD P + L++E+ GSLR +L + +K
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGAC---SQDGP-----LLLIVEYAKYGSLRGFLRESRKVG 124
Query: 552 -----------KDMLKWPQRMAIIIG--------ATRGVQFLHTGVAPGIFGNNLKTENI 592
L P A+ +G ++G+Q+L + +L NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNI 181
Query: 593 LLDKALTAKLSGYNI 607
L+ + K+S + +
Sbjct: 182 LVAEGRKMKISDFGL 196
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM---QHVELLSKLRHRHLVSILGH 515
IG GS G +YKG V+VK L + PQ L V +L K RH +++ +G+
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK-DMLKWPQRMAIIIGATRGVQFL 574
+T + +V + SL +L + K +M+K + I +G+ +L
Sbjct: 101 ---------STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYL 148
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
H A I +LK+ NI L + LT K+ + +
Sbjct: 149 H---AKSIIHRDLKSNNIFLHEDLTVKIGDFGL 178
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+IG G G +Y G L D + C +K R + Q L + + ++ H +++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 92
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
S+LG C+ + + +VL ++ +G LR+++ + +K + + +G
Sbjct: 93 SLLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKG 143
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTLSFH 620
+++L + +L N +LD+ T K++ + + + S H
Sbjct: 144 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 190
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+IG G G +Y G L D + C +K R + Q L + + ++ H +++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 112
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
S+LG C+ + + +VL ++ +G LR+++ + +K + + +G
Sbjct: 113 SLLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKG 163
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTLSFH 620
+++L + +L N +LD+ T K++ + + + S H
Sbjct: 164 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 210
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 44/195 (22%)
Query: 446 IEEATNNFDPTNLI-----GEGSQGQLYKG--FLTDG--SRVSVKCLKLKQRHLP---QS 493
+E+ F NL+ GEG G++ K F G +V LK+ P +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 494 LMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-- 551
L+ +L ++ H H++ + G C QD P + L++E+ GSLR +L + +K
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGAC---SQDGP-----LLLIVEYAKYGSLRGFLRESRKVG 124
Query: 552 -----------KDMLKWPQRMAIIIG--------ATRGVQFLHTGVAPGIFGNNLKTENI 592
L P A+ +G ++G+Q+L + +L NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNI 181
Query: 593 LLDKALTAKLSGYNI 607
L+ + K+S + +
Sbjct: 182 LVAEGRKMKISDFGL 196
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 20/152 (13%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLM---QHVELLSKLRHRHLVSILGH 515
IG GS G +YKG V+VK L + PQ L V +L K RH +++ +G+
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH 575
+T + +V + SL +L + K +K + + I RG+ +LH
Sbjct: 89 ---------STKPQLAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYLH 137
Query: 576 TGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A I +LK+ NI L + T K+ + +
Sbjct: 138 ---AKSIIHRDLKSNNIFLHEDNTVKIGDFGL 166
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+IG G G +Y G L D + C +K R + Q L + + ++ H +++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 91
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
S+LG C+ + + +VL ++ +G LR+++ + +K + + +G
Sbjct: 92 SLLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKG 142
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTLSFH 620
+++L + +L N +LD+ T K++ + + + S H
Sbjct: 143 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 189
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+IG G G +Y G L D + C +K R + Q L + + ++ H +++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 113
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
S+LG C+ + + +VL ++ +G LR+++ + +K + + +G
Sbjct: 114 SLLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKG 164
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTLSFH 620
+++L + +L N +LD+ T K++ + + + S H
Sbjct: 165 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 211
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+IG G G +Y G L D + C +K R + Q L + + ++ H +++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 89
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
S+LG C+ + + +VL ++ +G LR+++ + +K + + +G
Sbjct: 90 SLLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKG 140
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTLSFH 620
+++L + +L N +LD+ T K++ + + + S H
Sbjct: 141 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 187
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+IG G G +Y G L D + C +K R + Q L + + ++ H +++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 93
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
S+LG C+ + + +VL ++ +G LR+++ + +K + + +G
Sbjct: 94 SLLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKG 144
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTLSFH 620
+++L + +L N +LD+ T K++ + + + S H
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 191
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 459 IGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSI 512
+GEG+ G++YK T V++K ++L+ +P + ++ V LL +L+HR+++ +
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIEL 98
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKC-LKLKQR-----HLPQSLMQHVELLSKLRHRHLV 510
+IG G G +Y G L D + C +K R + Q L + + ++ H +++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 94
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
S+LG C+ + + +VL ++ +G LR+++ + +K + + +G
Sbjct: 95 SLLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKG 145
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTLSFH 620
+++L + +L N +LD+ T K++ + + + S H
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 192
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLY--------KGFLTDGSRVSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ K + V+VK LK ++ L L+ +E++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++ + S G+LR+YL
Sbjct: 102 NIINLLGACT---QDGP-----LYVIVAYASKGNLREYL 132
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L ++RH + I+T D + V L+LE +S G L D+L +
Sbjct: 60 EEIEREVNILREIRHPN--------IITLHDIFENKTDVVLILELVSGGELFDFLAE--- 108
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI-LLDK 596
K+ L + + GV +LH+ I +LK ENI LLDK
Sbjct: 109 KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDK 151
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 24/120 (20%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L ++RH + I+T D + V L+LE +S G L D+L +
Sbjct: 74 EEIEREVNILREIRHPN--------IITLHDIFENKTDVVLILELVSGGELFDFLAE--- 122
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI-LLDKALTAKLSGYNIPLP 610
K+ L + + GV +LH+ I +LK ENI LLDK N+P P
Sbjct: 123 KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDK---------NVPNP 170
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 15/106 (14%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L ++RH + I+T D + V L+LE +S G L D+L +
Sbjct: 53 EEIEREVNILREIRHPN--------IITLHDIFENKTDVVLILELVSGGELFDFLAE--- 101
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI-LLDK 596
K+ L + + GV +LH+ I +LK ENI LLDK
Sbjct: 102 KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDK 144
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 72/156 (46%), Gaps = 26/156 (16%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHC 516
IGEG+ G +YK G ++K ++L++ +P + ++ + +L +L+H ++V +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY--- 66
Query: 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-----KDMLKWPQRMAIIIGATRGV 571
D +T + LV EH+ D KK + L+ + ++ G+
Sbjct: 67 -----DVIHTKKRLVLVFEHLDQ--------DLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ H + +LK +N+L+++ K++ + +
Sbjct: 114 AYCHD---RRVLHRDLKPQNLLINREGELKIADFGL 146
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHC 516
IGEG+ G +YK G ++K ++L++ +P + ++ + +L +L+H ++V +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY--- 66
Query: 517 ILTYQDHPNTGSTVFLVLEHIS 538
D +T + LV EH+
Sbjct: 67 -----DVIHTKKRLVLVFEHLD 83
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 459 IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHC 516
IGEG+ G +YK G ++K ++L++ +P + ++ + +L +L+H ++V +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY--- 66
Query: 517 ILTYQDHPNTGSTVFLVLEHIS 538
D +T + LV EH+
Sbjct: 67 -----DVIHTKKRLVLVFEHLD 83
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 83/166 (50%), Gaps = 25/166 (15%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSV--KCLKLKQRHLP-QSLMQHVELLSKLRHR 507
+ ++ +LIG GS G + + + RV K L++ + + + +++ + +L++L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRD------YLTDWKKKDMLKWPQRM 561
H+V +L I+ +D +++VLE I++ + YLT+ K +L
Sbjct: 113 HVVKVLD--IVIPKD-VEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKTLL-----Y 163
Query: 562 AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+++ GV+++H+ GI +LK N L+++ + K+ + +
Sbjct: 164 NLLV----GVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGL 202
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 20/99 (20%)
Query: 459 IGEGSQGQLYK----GFLTDGSR----VSVKCLK--LKQRHLPQSLMQHVELLSKL-RHR 507
+GEG+ GQ+ G D + V+VK LK ++ L L+ +E++ + +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL-SDLVSEMEMMKMIGKHK 101
Query: 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+++++LG C QD P +++++ + S G+LR+YL
Sbjct: 102 NIINLLGACT---QDGP-----LYVIVGYASKGNLREYL 132
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 438 FRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSR-VSVKCLKLKQRHL--PQSL 494
F+G ++ ++ +N++ +LIG GS G +Y + + ++ V++K + L + +
Sbjct: 16 FQGAIIKNVK-VPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRI 74
Query: 495 MQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDM 554
++ + +L++L+ +++ + H ++ +D +++VLE I++ L+ +K
Sbjct: 75 LREITILNRLKSDYIIRL--HDLIIPEDLLKFDE-LYIVLE-IADSDLKKL---FKTPIF 127
Query: 555 LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
L I+ G +F+H GI +LK N LL++ + K+ + +
Sbjct: 128 LTEQHVKTILYNLLLGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGL 177
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSR-VSVKCLKLKQRH-----LPQSLMQHV 498
+++ ++ + +GEG +YK + ++ V++K +KL R + ++ ++ +
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 499 ELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558
+LL +L H +++ +L H + S VF +E D K ++ P
Sbjct: 64 KLLQELSHPNIIGLLDAF-----GHKSNISLVFDFME-------TDLEVIIKDNSLVLTP 111
Query: 559 QRM-AIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ A ++ +G+++LH I +LK N+LLD+ KL+ + +
Sbjct: 112 SHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGL 158
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
+FD +IG GS ++ L R+ ++K +K EL++
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVK-------------KELVNDDEDIDW 66
Query: 510 VSILGHCILTYQDHP---------NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR 560
V H +HP T S +F V+E+++ G L ++ +K P+
Sbjct: 67 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-----LPEE 121
Query: 561 MAIIIGA--TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A A + + +LH GI +LK +N+LLD KL+ Y +
Sbjct: 122 HARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGM 167
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 76/193 (39%), Gaps = 45/193 (23%)
Query: 440 GFSLEEIEEATN--------------NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKL 485
G +EE +EA N +FD +IG GS ++V + LK
Sbjct: 27 GSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSY-----------AKVLLVRLKK 75
Query: 486 KQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP---------NTGSTVFLVLEH 536
R +++ EL++ V H +HP T S +F V+E+
Sbjct: 76 TDRIYAMRVVKK-ELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY 134
Query: 537 ISNGSLRDYLTDWKKKDMLKWPQRMAIIIGA--TRGVQFLHTGVAPGIFGNNLKTENILL 594
++ G L ++ +K P+ A A + + +LH GI +LK +N+LL
Sbjct: 135 VNGGDLMFHMQRQRK-----LPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLL 186
Query: 595 DKALTAKLSGYNI 607
D KL+ Y +
Sbjct: 187 DSEGHIKLTDYGM 199
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
+FD +IG GS ++ L R+ ++K +K EL++
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVK-------------KELVNDDEDIDW 51
Query: 510 VSILGHCILTYQDHP---------NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR 560
V H +HP T S +F V+E+++ G L ++ +K P+
Sbjct: 52 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-----LPEE 106
Query: 561 MAIIIGA--TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A A + + +LH GI +LK +N+LLD KL+ Y +
Sbjct: 107 HARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGM 152
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 454 DPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
DP +L +G G G + G V++K +K + ++ +++ L H
Sbjct: 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD----WKKKDMLKWPQRMAII 564
LV + G C + P +F++ E+++NG L +YL + ++ + +L+ + +
Sbjct: 81 LVQLYGVCT---KQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ QFLH +L N L++ K+S + +
Sbjct: 133 MEYLESKQFLH---------RDLAARNCLVNDQGVVKVSDFGL 166
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 454 DPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
DP +L +G G G + G V++K +K + ++ +++ L H
Sbjct: 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD----WKKKDMLKWPQRMAII 564
LV + G C + P +F++ E+++NG L +YL + ++ + +L+ + +
Sbjct: 81 LVQLYGVCT---KQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ QFLH +L N L++ K+S + +
Sbjct: 133 MEYLESKQFLH---------RDLAARNCLVNDQGVVKVSDFGL 166
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCLKLKQRHLPQSLMQHVELLSKLRHRHL 509
+FD +IG GS ++ L R+ ++K +K EL++
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVK-------------KELVNDDEDIDW 55
Query: 510 VSILGHCILTYQDHP---------NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR 560
V H +HP T S +F V+E+++ G L ++ +K P+
Sbjct: 56 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-----LPEE 110
Query: 561 MAIIIGA--TRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
A A + + +LH GI +LK +N+LLD KL+ Y +
Sbjct: 111 HARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGM 156
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 454 DPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
DP +L +G G G + G V++K +K + ++ +++ L H
Sbjct: 2 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 60
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD----WKKKDMLKWPQRMAII 564
LV + G C + P +F++ E+++NG L +YL + ++ + +L+ + +
Sbjct: 61 LVQLYGVCT---KQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 112
Query: 565 IGATRGVQFLHTGVA 579
+ QFLH +A
Sbjct: 113 MEYLESKQFLHRDLA 127
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 454 DPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
DP +L +G G G + G V++K +K + ++ +++ L H
Sbjct: 6 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 64
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD----WKKKDMLKWPQRMAII 564
LV + G C + P +F++ E+++NG L +YL + ++ + +L+ + +
Sbjct: 65 LVQLYGVCT---KQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 116
Query: 565 IGATRGVQFLHTGVA 579
+ QFLH +A
Sbjct: 117 MEYLESKQFLHRDLA 131
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 27/163 (16%)
Query: 454 DPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
DP +L +G G G + G V++K +K + ++ +++ L H
Sbjct: 13 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 71
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD----WKKKDMLKWPQRMAII 564
LV + G C + P +F++ E+++NG L +YL + ++ + +L+ + +
Sbjct: 72 LVQLYGVCT---KQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 123
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ QFLH +L N L++ K+S + +
Sbjct: 124 MEYLESKQFLH---------RDLAARNCLVNDQGVVKVSDFGL 157
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Query: 454 DPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
DP +L +G G G + G V++K +K + ++ +++ L H
Sbjct: 7 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD----WKKKDMLKWPQRMAII 564
LV + G C + P +F++ E+++NG L +YL + ++ + +L+ + +
Sbjct: 66 LVQLYGVCT---KQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 117
Query: 565 IGATRGVQFLHTGVAP 580
+ QFLH +A
Sbjct: 118 MEYLESKQFLHRDLAA 133
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 456 TNLIGEGSQGQLYKG-FLTDGS--RVSVKCLKLKQRHLPQS---LMQHVELLSKLRHRHL 509
++G G+ G +YKG ++ +G ++ V L + P++ M +++ + H HL
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK 550
V +LG C+ T+ LV + + +G L +Y+ + K
Sbjct: 80 VRLLGVCL---------SPTIQLVTQLMPHGCLLEYVHEHK 111
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 454 DPTNL-----IGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508
DP +L +G G G + G V++K +K + ++ +++ L H
Sbjct: 7 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTD----WKKKDMLKWPQRMAII 564
LV + G C + P +F++ E+++NG L +YL + ++ + +L+ + +
Sbjct: 66 LVQLYGVCT---KQRP-----IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 117
Query: 565 IGATRGVQFLHTGVA 579
+ QFLH +A
Sbjct: 118 MEYLESKQFLHRDLA 132
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 456 TNLIGEGSQGQLYKG-FLTDGS--RVSVKCLKLKQRHLPQS---LMQHVELLSKLRHRHL 509
++G G+ G +YKG ++ +G ++ V L + P++ M +++ + H HL
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 510 VSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK 550
V +LG C+ T+ LV + + +G L +Y+ + K
Sbjct: 103 VRLLGVCL---------SPTIQLVTQLMPHGCLLEYVHEHK 134
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 18/108 (16%)
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQ 559
+LS + H ++ + G T+QD +F+++++I G L L + ++P
Sbjct: 59 MLSIVTHPFIIRMWG----TFQD----AQQIFMIMDYIEGGELFSLL-----RKSQRFPN 105
Query: 560 RMAIIIGAT--RGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605
+A A +++LH+ I +LK ENILLDK K++ +
Sbjct: 106 PVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDF 150
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 458 LIGEGSQGQLYKGFLTD--GSRVSVK---CLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
++GEG G++Y+G T+ G +++V C K + M ++ L H H+V +
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+G ++ P ++++E G L YL
Sbjct: 75 IG----IIEEEPT-----WIIMELYPYGELGHYL 99
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 458 LIGEGSQGQLYKGFLTD--GSRVSVK---CLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
++GEG G++Y+G T+ G +++V C K + M ++ L H H+V +
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+G ++ P ++++E G L YL
Sbjct: 79 IG----IIEEEPT-----WIIMELYPYGELGHYL 103
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 458 LIGEGSQGQLYKGFLTD--GSRVSVK---CLKLKQRHLPQSLMQHVELLSKLRHRHLVSI 512
++GEG G++Y+G T+ G +++V C K + M ++ L H H+V +
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+G ++ P ++++E G L YL
Sbjct: 91 IG----IIEEEPT-----WIIMELYPYGELGHYL 115
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFG 584
T ++ V+E+++ G L ++ K K PQ + + G+ FLH GI
Sbjct: 90 QTVDRLYFVMEYVNGGDLMYHIQQVGK---FKEPQAVFYAAEISIGLFFLHKR---GIIY 143
Query: 585 NNLKTENILLDKALTAKLSGYNI 607
+LK +N++LD K++ + +
Sbjct: 144 RDLKLDNVMLDSEGHIKIADFGM 166
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYK----GFL--TDGSRVSVKCLKLKQRHLPQSLMQ-HVE 499
E NN + IGEG+ G++++ G L + V+VK LK + Q+ Q
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 500 LLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
L+++ + ++V +LG C + G + L+ E+++ G L ++L
Sbjct: 103 LMAEFDNPNIVKLLGVCAV--------GKPMCLLFEYMAYGDLNEFL 141
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 451 NNFDPTNL------IGEGSQGQLYKGFLTDGSR-VSVKCLKLKQRHLPQSLMQH-VELLS 502
N DP L IG+GS G+++KG + V++K + L++ +Q + +LS
Sbjct: 17 NIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLS 76
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
+ ++ G + GS +++++E++ GS D L + Q
Sbjct: 77 QCDSSYVTKYYGSYL--------KGSKLWIIMEYLGGGSALDLLRAGPFDEF----QIAT 124
Query: 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
++ +G+ +LH+ ++K N+LL + KL+ + +
Sbjct: 125 MLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGV 166
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 230 SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274
SE+PSGL LK+ +S+N F Q + PS+ +L++ GN
Sbjct: 291 SELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGN 335
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 232 IPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAK-- 289
+PSG+K + LK+ +S N+F Q + PS+ +L + GN + L + + C K
Sbjct: 290 LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGN--VKKLHLGVGCLEKLG 347
Query: 290 -LNFVEISHN 298
L +++SHN
Sbjct: 348 NLQTLDLSHN 357
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 17/155 (10%)
Query: 443 LEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQ--SLMQHVEL 500
L+E + + LIG+G GQ+Y G V+++ + +++ + Q + + V
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMA 82
Query: 501 LSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR 560
+ RH ++V +G C+ P+ L +RD K +L +
Sbjct: 83 YRQTRHENVVLFMGACM----SPPHLAIITSLCKGRTLYSVVRD------AKIVLDVNKT 132
Query: 561 MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595
I +G+ +LH A GI +LK++N+ D
Sbjct: 133 RQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD 164
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 453 FDPTNLIGEGSQGQLYKGFLTDGSR-VSVKCLKL-KQRHLPQSLMQHVELLSKLRHRHLV 510
F + IG+GS G++YKG V++K + L + + + Q + +LS+ ++
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 511 SILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
G + + +++++E++ GS D L K L+ I+ +G
Sbjct: 81 RYFGSYL--------KSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKG 128
Query: 571 VQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ +LH+ ++K N+LL + KL+ + +
Sbjct: 129 LDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGV 162
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 451 NNFDPTNLIGEGSQGQLY---KGFLTD-GSRVSVKCLK---LKQRHLPQSLMQHVELLSK 503
++F+ ++G+GS G+++ K D G ++K LK LK R ++ M+ ++L+
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER-DILAD 86
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
+ H +V + H T ++L+L+ + G D T K+ M
Sbjct: 87 VNHPFVVKL--HYAF------QTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFY 135
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ G+ LH+ GI +LK ENILLD+ KL+ + +
Sbjct: 136 LAELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGL 176
>pdb|1JQK|A Chain A, Crystal Structure Of Carbon Monoxide Dehydrogenase From
Rhodospirillum Rubrum
pdb|1JQK|B Chain B, Crystal Structure Of Carbon Monoxide Dehydrogenase From
Rhodospirillum Rubrum
pdb|1JQK|C Chain C, Crystal Structure Of Carbon Monoxide Dehydrogenase From
Rhodospirillum Rubrum
pdb|1JQK|D Chain D, Crystal Structure Of Carbon Monoxide Dehydrogenase From
Rhodospirillum Rubrum
pdb|1JQK|E Chain E, Crystal Structure Of Carbon Monoxide Dehydrogenase From
Rhodospirillum Rubrum
pdb|1JQK|F Chain F, Crystal Structure Of Carbon Monoxide Dehydrogenase From
Rhodospirillum Rubrum
Length = 639
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDY 545
RHLV ++ + +H G + L ++HIS G L DY
Sbjct: 82 RHLVRMIAAGTAAHSEH---GRHIALAMQHISQGELHDY 117
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/156 (17%), Positives = 75/156 (48%), Gaps = 17/156 (10%)
Query: 457 NLIGEGSQGQLYKGFLTDGSRVSVKCL-----KLKQRHLPQSLMQHVELLSKLRHRHLVS 511
+IG+G G +Y G D ++ ++C ++ + ++ ++ L+ L H ++++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGV 571
++G +L + P+ ++L ++ +G L ++ ++ +K ++ + RG+
Sbjct: 87 LIG-IMLPPEGLPH------VLLPYMCHGDLLQFIRSPQRNPTVK--DLISFGLQVARGM 137
Query: 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
++L +L N +LD++ T K++ + +
Sbjct: 138 EYL---AEQKFVHRDLAARNCMLDESFTVKVADFGL 170
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 11/69 (15%)
Query: 242 LKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLI 301
L+ F+IS+N F + + LYLN GN L+E LP I + L +++SHN L
Sbjct: 234 LQIFNISAN-------IFKYDFLTRLYLN--GNSLTE-LPAEIKNLSNLRVLDLSHNRLT 283
Query: 302 GKLPSCIGS 310
LP+ +GS
Sbjct: 284 S-LPAELGS 291
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L +++H +++++ H + Y++ + V L+LE ++ G L D+L +
Sbjct: 59 EDIEREVSILKEIQHPNVITL--HEV--YENKTD----VILILELVAGGELFDFLAE--- 107
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + GV +LH+ I +LK ENI+L
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIML 147
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L +++H +++++ H + Y++ + V L+LE ++ G L D+L +
Sbjct: 59 EDIEREVSILKEIQHPNVITL--HEV--YENKTD----VILILELVAGGELFDFLAE--- 107
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + GV +LH+ I +LK ENI+L
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIML 147
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L +++H +++++ H + Y++ + V L+LE ++ G L D+L +
Sbjct: 59 EDIEREVSILKEIQHPNVITL--HEV--YENKTD----VILILELVAGGELFDFLAE--- 107
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + GV +LH+ I +LK ENI+L
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIML 147
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L +++H +++++ H + Y++ + V L+LE ++ G L D+L +
Sbjct: 59 EDIEREVSILKEIQHPNVITL--HEV--YENKTD----VILILELVAGGELFDFLAE--- 107
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + GV +LH+ I +LK ENI+L
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIML 147
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L +++H +++++ H + Y++ + V L+LE ++ G L D+L +
Sbjct: 59 EDIEREVSILKEIQHPNVITL--HEV--YENKTD----VILILELVAGGELFDFLAE--- 107
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + GV +LH+ I +LK ENI+L
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIML 147
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L +++H +++++ H + Y++ + V L+LE ++ G L D+L +
Sbjct: 59 EDIEREVSILKEIQHPNVITL--HEV--YENK----TDVILILELVAGGELFDFLAE--- 107
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + GV +LH+ I +LK ENI+L
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIML 147
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L +++H +++++ H + Y++ + V L+LE ++ G L D+L +
Sbjct: 59 EDIEREVSILKEIQHPNVITL--HEV--YENK----TDVILILELVAGGELFDFLAE--- 107
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + GV +LH+ I +LK ENI+L
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIML 147
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 77/153 (50%), Gaps = 19/153 (12%)
Query: 459 IGEGSQGQLYKGFLTDGSR-VSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGH 515
IGEG+ G ++K + V++K ++L +P S ++ + LL +L+H+++V + H
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL--H 67
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM-AIIIGATRGVQFL 574
+L ++ + LV E + L+ Y D D+ P+ + + + +G+ F
Sbjct: 68 DVL------HSDKKLTLVFE-FCDQDLKKYF-DSCNGDLD--PEIVKSFLFQLLKGLGFC 117
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
H+ + +LK +N+L+++ KL+ + +
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLANFGL 147
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L +++H +++++ H + Y++ + V L+LE ++ G L D+L +
Sbjct: 59 EDIEREVSILKEIQHPNVITL--HEV--YENKTD----VILILELVAGGELFDFLAE--- 107
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + GV +LH+ I +LK ENI+L
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIML 147
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L +++H +++++ H + Y++ + V L+LE ++ G L D+L +
Sbjct: 58 EDIEREVSILKEIQHPNVITL--HEV--YENKTD----VILILELVAGGELFDFLAE--- 106
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + GV +LH+ I +LK ENI+L
Sbjct: 107 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIML 146
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L +++H +++++ H + Y++ + V L+LE ++ G L D+L +
Sbjct: 59 EDIEREVSILKEIQHPNVITL--HEV--YENKTD----VILILELVAGGELFDFLAE--- 107
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + GV +LH+ I +LK ENI+L
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIML 147
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L +++H +++++ H + Y++ + V L+LE ++ G L D+L +
Sbjct: 58 EDIEREVSILKEIQHPNVITL--HEV--YENKTD----VILILELVAGGELFDFLAE--- 106
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + GV +LH+ I +LK ENI+L
Sbjct: 107 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIML 146
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L +++H +++++ H + Y++ + V L+LE ++ G L D+L +
Sbjct: 59 EDIEREVSILKEIQHPNVITL--HEV--YENKTD----VILILELVAGGELFDFLAE--- 107
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + GV +LH+ I +LK ENI+L
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIML 147
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 492 QSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK 551
+ + + V +L +++H +++++ H + Y++ + V L+LE ++ G L D+L +
Sbjct: 59 EDIEREVSILKEIQHPNVITL--HEV--YENKTD----VILILELVAGGELFDFLAE--- 107
Query: 552 KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
K+ L + + GV +LH+ I +LK ENI+L
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIML 147
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 32/179 (17%)
Query: 452 NFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLV 510
+F LIG G GQ++K DG ++ +K + + V+ L+KL H ++V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIV 68
Query: 511 SILGHCILTYQDHPNTGST----------------------VFLVLEHISNGSLRDYLTD 548
G C + P T +F+ +E G+L ++ +
Sbjct: 69 HYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-E 126
Query: 549 WKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
++ + L + + T+GV ++H + + +LK NI L K+ + +
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGL 182
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 77/153 (50%), Gaps = 19/153 (12%)
Query: 459 IGEGSQGQLYKGFLTDGSR-VSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGH 515
IGEG+ G ++K + V++K ++L +P S ++ + LL +L+H+++V + H
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL--H 67
Query: 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRM-AIIIGATRGVQFL 574
+L ++ + LV E + L+ Y D D+ P+ + + + +G+ F
Sbjct: 68 DVL------HSDKKLTLVFE-FCDQDLKKYF-DSCNGDLD--PEIVKSFLFQLLKGLGFC 117
Query: 575 HTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
H+ + +LK +N+L+++ KL+ + +
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLADFGL 147
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 451 NNFDPTNL------IGEGSQGQLYKGFLTDGSR-VSVKCLKL-KQRHLPQSLMQHVELLS 502
+ DP L IG+GS G+++KG + V++K + L + + + Q + +LS
Sbjct: 21 QSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 80
Query: 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMA 562
+ ++ G + + +++++E++ GS D L + L Q
Sbjct: 81 QCDSPYVTKYYGSYL--------KDTKLWIIMEYLGGGSALDLL----EPGPLDETQIAT 128
Query: 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
I+ +G+ +LH+ ++K N+LL + KL+ + +
Sbjct: 129 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGV 170
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 21/156 (13%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR 505
E+ + ++ +LIG+GS GQ+ K + + V++K +K K+ L Q+ ++ V LL +L
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIE-VRLL-ELM 107
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL--TDWKKKDM---LKWPQR 560
++H + + I+ + H + + LV E +S +L D L T+++ + K+ Q+
Sbjct: 108 NKHDTE-MKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 561 M--AIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
M A++ AT + +H +LK ENILL
Sbjct: 166 MCTALLFLATPELSIIHC---------DLKPENILL 192
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 453 FDPTNLIGEGSQGQLYKGFLTDGSRV----SVKCLK--LKQRHLPQSLMQHVE--LLSKL 504
F+ ++G+G G++++ G+ ++K LK + R+ + E +L ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
+H +V + I +Q TG ++L+LE++S G L +++ + +
Sbjct: 79 KHPFIVDL----IYAFQ----TGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYL 127
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ + LH GI +LK ENI+L+ KL+ + +
Sbjct: 128 AEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 21/156 (13%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR 505
E+ + ++ +LIG+GS GQ+ K + + V++K +K K+ L Q+ ++ V LL +L
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIE-VRLL-ELM 107
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL--TDWKKKDM---LKWPQR 560
++H + + I+ + H + + LV E +S +L D L T+++ + K+ Q+
Sbjct: 108 NKHDTE-MKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 561 M--AIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
M A++ AT + +H +LK ENILL
Sbjct: 166 MCTALLFLATPELSIIHC---------DLKPENILL 192
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 21/116 (18%)
Query: 441 FSLEEIEEATNNFDPTNLIGEGSQGQLY----KGFLTD--GSRVSVKCL----KLKQRHL 490
F +E E A + +G+GS G +Y KG + D +RV++K + +++R
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI- 64
Query: 491 PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL 546
+ ++ + H+V +LG + G +++E ++ G L+ YL
Sbjct: 65 --EFLNEASVMKEFNCHHVVRLLGVV--------SQGQPTLVIMELMTRGDLKSYL 110
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 452 NFDPTNL------IGEGSQGQLYKGFLTDGSR-VSVKCLKL-KQRHLPQSLMQHVELLSK 503
+ DP L IG+GS G+++KG + V++K + L + + + Q + +LS+
Sbjct: 2 SLDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 61
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
++ G + + +++++E++ GS D L + L Q I
Sbjct: 62 CDSPYVTKYYGSYL--------KDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATI 109
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ +G+ +LH+ ++K N+LL + KL+ + +
Sbjct: 110 LREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGV 150
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 453 FDPTNLIGEGSQGQLYKGFLTDGSRV----SVKCLK--LKQRHLPQSLMQHVE--LLSKL 504
F+ ++G+G G++++ G+ ++K LK + R+ + E +L ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 505 RHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAII 564
+H +V + I +Q TG ++L+LE++S G L +++ + +
Sbjct: 79 KHPFIVDL----IYAFQ----TGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYL 127
Query: 565 IGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ + LH GI +LK ENI+L+ KL+ + +
Sbjct: 128 AEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|2RH3|A Chain A, Crystal Structure Of Plasmid Ptic58 Virc2
Length = 121
Score = 30.0 bits (66), Expect = 3.7, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 401 YERSVADKMSVRGSPKPAIDSRRVPQTMRSAAIGLPPFRGFSLEEIEEATNNFDPTNL 458
+E +AD S R +PK S +P T +I + R F + IE A N+FDP L
Sbjct: 42 FENMLADG-SFRAAPK----SYPIPHTAFEKSIIVQTSRMFPVSLIEAARNHFDPLGL 94
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 452 NFDPTNL------IGEGSQGQLYKGFLTDGSR-VSVKCLKL-KQRHLPQSLMQHVELLSK 503
+ DP L IG+GS G+++KG + V++K + L + + + Q + +LS+
Sbjct: 2 SLDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 61
Query: 504 LRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAI 563
++ G + + +++++E++ GS D L + L Q I
Sbjct: 62 CDSPYVTKYYGSYL--------KDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATI 109
Query: 564 IIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ +G+ +LH+ ++K N+LL + KL+ + +
Sbjct: 110 LREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGV 150
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 21/156 (13%)
Query: 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR 505
E+ + ++ +LIG+GS GQ+ K + + V++K +K K+ L Q+ ++ V LL +L
Sbjct: 31 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIE-VRLL-ELM 88
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYL--TDWKKKDM---LKWPQR 560
++H + + I+ + H + + LV E +S +L D L T+++ + K+ Q+
Sbjct: 89 NKHDTE-MKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQ 146
Query: 561 M--AIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594
M A++ AT + +H +LK ENILL
Sbjct: 147 MCTALLFLATPELSIIHC---------DLKPENILL 173
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 23/162 (14%)
Query: 454 DPTNL------IGEGSQGQLYKGFLTDGSR-VSVKCLKL-KQRHLPQSLMQHVELLSKLR 505
DP L IG+GS G+++KG + V++K + L + + + Q + +LS+
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 78
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
++ G + + +++++E++ GS D L + L Q I+
Sbjct: 79 SPYVTKYYGSYL--------KDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILR 126
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+G+ +LH+ ++K N+LL + KL+ + +
Sbjct: 127 EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGV 165
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 27/174 (15%)
Query: 446 IEEATNNFDPTN-----LIGEGSQGQLYKGFLTDGSRV----SVKCLK---LKQRHLPQS 493
++E DP+ ++G+GS G+++ GS ++K LK LK R ++
Sbjct: 14 VKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT 73
Query: 494 LMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKD 553
M+ ++L ++ H +V + H T ++L+L+ + G D T K+
Sbjct: 74 KMER-DILVEVNHPFIVKL--HYAF------QTEGKLYLILDFLRGG---DLFTRLSKEV 121
Query: 554 MLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
M + + LH+ GI +LK ENILLD+ KL+ + +
Sbjct: 122 MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGL 172
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 459 IGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQ---HVELLSKLRHRHLVSIL- 513
+G G G + + D G +V++K + +Q P++ + ++++ KL H ++VS
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIK--QCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 514 ---GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
G L D P L +E+ G LR YL ++ LK ++ +
Sbjct: 80 VPDGLQKLAPNDLP------LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 571 VQFLHTGVAPGIFGNNLKTENILL 594
+++LH I +LK ENI+L
Sbjct: 134 LRYLHEN---RIIHRDLKPENIVL 154
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 459 IGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQ---HVELLSKLRHRHLVSIL- 513
+G G G + + D G +V++K + +Q P++ + ++++ KL H ++VS
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIK--QCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 514 ---GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570
G L D P L +E+ G LR YL ++ LK ++ +
Sbjct: 81 VPDGLQKLAPNDLP------LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 571 VQFLHTGVAPGIFGNNLKTENILL 594
+++LH I +LK ENI+L
Sbjct: 135 LRYLHEN---RIIHRDLKPENIVL 155
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 20/176 (11%)
Query: 450 TNNFDPTNLIGEGSQGQLYKG-FLTDGSRVSVKCL---KLKQRHLPQSLMQHVELLSKLR 505
++N+D +G+G+ + + T G + K + KL R Q L + + KL+
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF-QKLEREARICRKLQ 86
Query: 506 HRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIII 565
H ++V + D S +LV + ++ G L D ++ I
Sbjct: 87 HPNIVRL--------HDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQ 135
Query: 566 GATRGVQFLHTGVAPGIFGNNLKTENILL-DKALTAKLSGYNIPLPSKVRNTLSFH 620
+ + H+ GI NLK EN+LL KA A + + L +V ++ ++H
Sbjct: 136 QILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 188
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 496 QHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDML 555
+ ++LL +LRH++++ ++ + Y + +++V+E+ G +++ L +K
Sbjct: 55 KEIQLLRRLRHKNVIQLVD---VLYNEEKQ---KMYMVMEYCVCG-MQEMLDSVPEK--- 104
Query: 556 KWP--QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
++P Q G+++LH+ GI ++K N+LL T K+S +
Sbjct: 105 RFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGV 155
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 27/174 (15%)
Query: 446 IEEATNNFDPTN-----LIGEGSQGQLYKGFLTDGSRV----SVKCLK---LKQRHLPQS 493
++E DP+ ++G+GS G+++ GS ++K LK LK R ++
Sbjct: 15 VKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT 74
Query: 494 LMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKD 553
M+ ++L ++ H +V + H T ++L+L+ + G D T K+
Sbjct: 75 KMER-DILVEVNHPFIVKL--HYAF------QTEGKLYLILDFLRGG---DLFTRLSKEV 122
Query: 554 MLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
M + + LH+ GI +LK ENILLD+ KL+ + +
Sbjct: 123 MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGL 173
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRV-SVKCL---KLKQRHLPQSLMQHVELLSKLRH 506
++F+ IG+GS G++ D ++ ++K + K +R+ +++ + ++++ L H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIG 566
LV++ ++QD + +F+V++ + G LR +L ++ K I
Sbjct: 75 PFLVNLW----YSFQDEED----MFMVVDLLLGGDLRYHL---QQNVHFKEETVKLFICE 123
Query: 567 ATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
+ +L I ++K +NILLD+ ++ +NI
Sbjct: 124 LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNI 161
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 27/174 (15%)
Query: 446 IEEATNNFDPTN-----LIGEGSQGQLYKGFLTDGSRV----SVKCLK---LKQRHLPQS 493
++E DP+ ++G+GS G+++ GS ++K LK LK R ++
Sbjct: 14 VKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT 73
Query: 494 LMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKD 553
M+ ++L ++ H +V + H T ++L+L+ + G D T K+
Sbjct: 74 KMER-DILVEVNHPFIVKL--HYAF------QTEGKLYLILDFLRGG---DLFTRLSKEV 121
Query: 554 MLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607
M + + LH+ GI +LK ENILLD+ KL+ + +
Sbjct: 122 MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGL 172
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,063,160
Number of Sequences: 62578
Number of extensions: 605037
Number of successful extensions: 2102
Number of sequences better than 100.0: 445
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 412
Number of HSP's that attempted gapping in prelim test: 1866
Number of HSP's gapped (non-prelim): 521
length of query: 640
length of database: 14,973,337
effective HSP length: 105
effective length of query: 535
effective length of database: 8,402,647
effective search space: 4495416145
effective search space used: 4495416145
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)