Query 006570
Match_columns 640
No_of_seqs 779 out of 4967
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 03:07:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006570.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006570hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-43 4E-48 366.3 19.9 292 28-327 2-307 (313)
2 4asz_A BDNF/NT-3 growth factor 100.0 3.6E-42 1.2E-46 350.3 10.5 179 451-640 13-228 (299)
3 4aoj_A High affinity nerve gro 100.0 1.7E-41 5.7E-46 350.2 12.6 179 451-640 41-258 (329)
4 3omv_A RAF proto-oncogene seri 100.0 7.3E-41 2.5E-45 340.8 15.4 175 450-640 35-234 (307)
5 4gt4_A Tyrosine-protein kinase 100.0 3.5E-41 1.2E-45 344.5 12.4 177 452-639 27-244 (308)
6 4fih_A Serine/threonine-protei 100.0 1.9E-40 6.4E-45 342.1 13.0 175 451-640 74-267 (346)
7 3rgz_A Protein brassinosteroid 100.0 8.3E-40 2.8E-44 378.1 19.9 295 25-327 5-333 (768)
8 4b9d_A Serine/threonine-protei 100.0 1.3E-40 4.6E-45 343.7 10.9 178 451-640 24-222 (350)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.8E-40 2.3E-44 332.9 11.9 176 451-640 32-231 (311)
10 4fie_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 343.7 14.6 175 451-640 151-344 (423)
11 3fpq_A Serine/threonine-protei 100.0 2.2E-39 7.7E-44 327.4 12.7 179 454-640 29-226 (290)
12 3hmm_A TGF-beta receptor type- 100.0 1.4E-39 4.7E-44 333.3 10.2 177 452-640 4-215 (303)
13 3hyh_A Carbon catabolite-derep 100.0 1E-38 3.5E-43 319.8 15.3 175 451-640 13-209 (275)
14 4ase_A Vascular endothelial gr 100.0 1.3E-39 4.4E-44 338.8 9.0 190 441-640 54-285 (353)
15 4g3f_A NF-kappa-beta-inducing 100.0 5.3E-39 1.8E-43 330.3 11.2 171 451-640 58-253 (336)
16 3ubd_A Ribosomal protein S6 ki 100.0 2.2E-39 7.5E-44 329.1 6.3 176 451-640 24-223 (304)
17 4g31_A Eukaryotic translation 100.0 2.1E-38 7.2E-43 323.1 12.7 185 451-638 5-225 (299)
18 4eco_A Uncharacterized protein 100.0 1.4E-37 4.9E-42 351.6 16.3 293 28-328 26-449 (636)
19 4ecn_A Leucine-rich repeat pro 100.0 2.5E-36 8.5E-41 348.0 17.0 291 27-327 264-688 (876)
20 4b99_A Mitogen-activated prote 100.0 3.1E-36 1.1E-40 318.8 14.2 181 451-640 54-260 (398)
21 3rgz_A Protein brassinosteroid 100.0 7.3E-35 2.5E-39 336.8 19.4 272 76-348 395-745 (768)
22 3v5w_A G-protein coupled recep 100.0 5E-35 1.7E-39 322.6 14.4 177 450-640 188-388 (689)
23 4fcg_A Uncharacterized protein 100.0 5.6E-35 1.9E-39 303.2 14.0 266 27-327 22-316 (328)
24 4f9c_A Cell division cycle 7-r 100.0 6.9E-35 2.4E-39 305.1 13.5 174 448-640 18-244 (361)
25 3uto_A Twitchin; kinase, muscl 100.0 1.5E-34 5.2E-39 320.7 12.3 178 450-640 156-353 (573)
26 1ogq_A PGIP-2, polygalacturona 100.0 2.7E-33 9.1E-38 288.8 14.3 229 100-330 50-286 (313)
27 3uim_A Brassinosteroid insensi 100.0 3.3E-33 1.1E-37 289.8 14.7 195 438-640 17-232 (326)
28 2qkw_B Protein kinase; three-h 100.0 3.3E-33 1.1E-37 289.3 13.5 188 442-640 30-238 (321)
29 3fxz_A Serine/threonine-protei 100.0 1.3E-32 4.5E-37 281.5 16.3 176 450-640 19-213 (297)
30 2c30_A Serine/threonine-protei 100.0 2.3E-32 7.8E-37 282.9 16.7 186 440-640 24-238 (321)
31 3v47_A TOLL-like receptor 5B a 100.0 1.1E-31 3.6E-36 291.6 22.3 267 57-327 5-386 (455)
32 4aw2_A Serine/threonine-protei 100.0 1E-32 3.6E-37 296.3 12.2 185 443-640 66-278 (437)
33 2nru_A Interleukin-1 receptor- 100.0 9.1E-32 3.1E-36 276.4 18.0 191 438-640 12-231 (307)
34 3fe3_A MAP/microtubule affinit 100.0 1.8E-32 6.3E-37 284.2 12.9 177 450-640 14-211 (328)
35 1o6l_A RAC-beta serine/threoni 100.0 3.5E-32 1.2E-36 283.0 14.9 176 451-640 5-202 (337)
36 3s95_A LIMK-1, LIM domain kina 100.0 3.6E-32 1.2E-36 280.0 14.0 177 451-640 10-219 (310)
37 3zgw_A Maternal embryonic leuc 100.0 4E-32 1.4E-36 283.5 13.7 178 449-640 8-207 (347)
38 1fot_A TPK1 delta, CAMP-depend 100.0 6.7E-32 2.3E-36 278.7 15.1 176 451-640 6-200 (318)
39 3p86_A Serine/threonine-protei 100.0 1.6E-32 5.6E-37 282.4 9.4 184 445-640 31-236 (309)
40 3qd2_B Eukaryotic translation 100.0 6.5E-32 2.2E-36 280.4 14.0 188 450-640 5-273 (332)
41 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.7E-32 1.3E-36 284.7 12.1 178 449-640 21-221 (353)
42 3v8s_A RHO-associated protein 100.0 2.2E-32 7.5E-37 291.6 10.2 182 444-640 62-270 (410)
43 2psq_A Fibroblast growth facto 100.0 5.3E-32 1.8E-36 285.8 12.8 179 450-639 80-302 (370)
44 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.4E-32 1.8E-36 285.4 12.9 177 450-640 64-282 (365)
45 3v47_A TOLL-like receptor 5B a 100.0 7.2E-31 2.5E-35 285.1 22.1 255 75-329 54-412 (455)
46 2qol_A Ephrin receptor; recept 100.0 4.7E-32 1.6E-36 286.4 12.2 177 450-639 44-247 (373)
47 4eqm_A Protein kinase; transfe 100.0 1.3E-31 4.3E-36 273.8 14.7 177 450-640 10-209 (294)
48 2vd5_A DMPK protein; serine/th 100.0 3.4E-32 1.2E-36 290.2 10.8 185 443-640 53-267 (412)
49 3ugc_A Tyrosine-protein kinase 100.0 2.6E-32 9E-37 278.9 9.4 179 451-640 10-214 (295)
50 1xjd_A Protein kinase C, theta 100.0 1.1E-31 3.6E-36 280.2 14.0 179 448-640 14-215 (345)
51 2yab_A Death-associated protei 100.0 2E-31 6.8E-36 279.9 16.2 177 450-640 11-215 (361)
52 4euu_A Serine/threonine-protei 100.0 1.4E-31 4.8E-36 276.8 14.7 181 451-640 9-220 (319)
53 4fr4_A YANK1, serine/threonine 100.0 1.3E-31 4.6E-36 283.0 14.8 176 451-640 15-214 (384)
54 4dc2_A Protein kinase C IOTA t 100.0 9.2E-32 3.1E-36 285.2 13.2 177 450-640 51-250 (396)
55 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.5E-31 5.1E-36 279.9 14.4 176 451-640 41-235 (350)
56 3niz_A Rhodanese family protei 100.0 1.8E-31 6.1E-36 275.0 14.2 177 450-640 20-217 (311)
57 3kul_A Ephrin type-A receptor 100.0 8.1E-32 2.8E-36 279.3 11.6 177 450-639 48-251 (325)
58 3soc_A Activin receptor type-2 100.0 5.9E-32 2E-36 280.0 10.5 181 450-640 23-235 (322)
59 3q4u_A Activin receptor type-1 100.0 1.2E-31 4.1E-36 274.6 12.2 175 450-639 7-219 (301)
60 1k9a_A Carboxyl-terminal SRC k 100.0 1.8E-31 6E-36 289.2 13.9 177 450-640 192-384 (450)
61 2y0a_A Death-associated protei 100.0 3.2E-31 1.1E-35 274.9 15.3 176 451-640 11-214 (326)
62 1tki_A Titin; serine kinase, m 100.0 1.6E-31 5.6E-36 276.4 12.8 177 450-640 4-200 (321)
63 3a8x_A Protein kinase C IOTA t 100.0 1.4E-31 4.8E-36 279.6 12.2 176 451-640 9-207 (345)
64 1qcf_A Haematopoetic cell kina 100.0 6E-32 2E-36 293.3 9.7 181 446-640 183-383 (454)
65 4hcu_A Tyrosine-protein kinase 100.0 1.5E-31 5E-36 269.5 11.8 175 451-639 10-204 (269)
66 2pmi_A Negative RE, cyclin-dep 100.0 5.3E-31 1.8E-35 272.2 16.2 179 450-640 4-206 (317)
67 2i0e_A Protein kinase C-beta I 100.0 2.1E-31 7.3E-36 278.8 13.4 178 449-640 18-218 (353)
68 3a62_A Ribosomal protein S6 ki 100.0 1.7E-31 5.7E-36 277.2 12.2 177 450-640 16-218 (327)
69 3tki_A Serine/threonine-protei 100.0 1.3E-31 4.3E-36 277.6 11.0 177 450-640 6-205 (323)
70 1kob_A Twitchin; kinase, intra 100.0 3.2E-31 1.1E-35 280.9 13.7 178 450-640 50-247 (387)
71 3ork_A Serine/threonine protei 100.0 1.3E-31 4.6E-36 275.9 10.6 181 450-640 11-216 (311)
72 1opk_A P150, C-ABL, proto-onco 100.0 1.8E-31 6.2E-36 292.4 12.1 178 449-639 218-416 (495)
73 3zyj_A Leucine-rich repeat-con 100.0 5.2E-30 1.8E-34 277.2 23.3 225 100-326 64-293 (440)
74 3vhe_A Vascular endothelial gr 100.0 8.7E-32 3E-36 283.0 8.9 189 441-639 12-292 (359)
75 3cbl_A C-FES, proto-oncogene t 100.0 4.7E-32 1.6E-36 287.0 6.6 177 450-639 113-312 (377)
76 2zv2_A Calcium/calmodulin-depe 100.0 3.3E-31 1.1E-35 271.1 12.7 178 450-640 12-237 (298)
77 2bdw_A Hypothetical protein K1 100.0 5.3E-31 1.8E-35 277.2 14.5 178 449-640 27-227 (362)
78 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.9E-31 9.8E-36 275.9 12.3 176 450-640 8-205 (336)
79 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.6E-31 8.8E-36 267.5 11.6 177 450-640 7-203 (268)
80 2z66_A Variable lymphocyte rec 100.0 1.1E-30 3.7E-35 268.4 16.4 227 100-327 28-263 (306)
81 3c0i_A Peripheral plasma membr 100.0 2.1E-31 7.2E-36 279.2 11.3 179 451-640 24-230 (351)
82 1ob3_A PFPK5, cell division co 100.0 2.8E-31 9.5E-36 270.4 11.8 176 451-640 2-198 (288)
83 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.8E-32 2.7E-36 292.2 8.0 178 448-639 181-378 (452)
84 3o0g_A Cell division protein k 100.0 6.7E-31 2.3E-35 268.0 14.5 176 451-640 2-199 (292)
85 2x4f_A Myosin light chain kina 100.0 5.3E-31 1.8E-35 278.3 13.7 172 456-640 94-285 (373)
86 2acx_A G protein-coupled recep 100.0 5E-31 1.7E-35 290.2 14.0 179 450-640 183-382 (576)
87 3zyi_A Leucine-rich repeat-con 100.0 9.6E-30 3.3E-34 276.0 23.8 225 100-326 75-304 (452)
88 2r5t_A Serine/threonine-protei 100.0 3.4E-31 1.2E-35 279.2 11.8 177 450-640 37-236 (373)
89 3f3z_A Calcium/calmodulin-depe 100.0 9.3E-31 3.2E-35 264.7 14.4 177 450-640 8-204 (277)
90 3gen_A Tyrosine-protein kinase 100.0 3.5E-31 1.2E-35 268.7 11.3 177 450-640 23-219 (283)
91 2id5_A Lingo-1, leucine rich r 100.0 7.8E-30 2.7E-34 278.8 22.7 260 67-327 13-311 (477)
92 3soa_A Calcium/calmodulin-depe 100.0 6.9E-31 2.4E-35 283.1 13.6 178 449-640 9-210 (444)
93 3uc3_A Serine/threonine-protei 100.0 8.2E-31 2.8E-35 275.7 13.8 176 450-640 19-215 (361)
94 2w4o_A Calcium/calmodulin-depe 100.0 6.3E-31 2.2E-35 275.3 12.7 176 449-640 51-247 (349)
95 2y94_A 5'-AMP-activated protei 100.0 1.1E-30 3.9E-35 283.3 15.1 176 451-640 16-213 (476)
96 1luf_A Muscle-specific tyrosin 100.0 2.1E-31 7.1E-36 278.1 8.8 184 446-640 42-274 (343)
97 4fvq_A Tyrosine-protein kinase 100.0 2.9E-31 1E-35 270.1 9.5 176 451-639 8-214 (289)
98 3g33_A Cell division protein k 100.0 2.4E-30 8.2E-35 266.0 16.4 184 449-640 7-216 (308)
99 4e5w_A Tyrosine-protein kinase 100.0 6.7E-31 2.3E-35 269.2 12.1 179 451-640 21-226 (302)
100 2eva_A TAK1 kinase - TAB1 chim 100.0 5.8E-31 2E-35 270.6 11.6 177 451-640 8-200 (307)
101 3rp9_A Mitogen-activated prote 100.0 1E-30 3.4E-35 284.3 14.0 179 451-639 53-280 (458)
102 4ejn_A RAC-alpha serine/threon 100.0 2.5E-31 8.4E-36 288.0 9.1 178 450-640 147-346 (446)
103 3llt_A Serine/threonine kinase 100.0 3.9E-31 1.3E-35 278.2 10.3 187 440-640 24-256 (360)
104 3tt0_A Basic fibroblast growth 100.0 9.7E-31 3.3E-35 277.5 13.0 179 450-639 68-290 (382)
105 3qup_A Tyrosine-protein kinase 100.0 5.4E-31 1.8E-35 272.8 10.8 186 449-639 21-236 (323)
106 1qpc_A LCK kinase; alpha beta 100.0 2.5E-31 8.5E-36 269.2 8.1 177 449-639 11-207 (279)
107 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.6E-30 5.3E-35 285.6 15.0 179 451-640 185-386 (543)
108 2h8h_A Proto-oncogene tyrosine 100.0 1.3E-31 4.3E-36 296.4 6.3 178 448-639 264-461 (535)
109 2izr_A Casein kinase I isoform 100.0 1E-30 3.4E-35 271.7 12.6 174 451-640 9-214 (330)
110 2eue_A Carbon catabolite derep 100.0 3E-30 1E-34 260.8 15.7 175 451-640 13-209 (275)
111 3is5_A Calcium-dependent prote 100.0 1.2E-30 4.2E-35 265.2 12.8 179 451-640 22-222 (285)
112 1u5q_A Serine/threonine protei 100.0 1E-30 3.5E-35 273.4 12.5 176 451-640 54-250 (348)
113 3kex_A Receptor tyrosine-prote 100.0 5E-31 1.7E-35 273.4 9.9 176 451-640 13-215 (325)
114 3gni_B Strad alpha; kinase fol 100.0 7.6E-31 2.6E-35 279.0 11.5 178 451-640 25-234 (389)
115 3lb7_A RAF proto-oncogene seri 100.0 1.4E-30 4.9E-35 267.7 13.1 175 450-640 35-234 (307)
116 2ac3_A MAP kinase-interacting 100.0 2.6E-30 9.1E-35 266.6 15.1 176 451-640 12-223 (316)
117 3kn6_A Ribosomal protein S6 ki 100.0 3E-30 1E-34 267.5 15.5 168 456-640 16-206 (325)
118 3cok_A Serine/threonine-protei 100.0 2.3E-30 7.8E-35 262.0 14.2 178 450-640 10-209 (278)
119 2ivs_A Proto-oncogene tyrosine 100.0 6.9E-31 2.4E-35 270.6 10.5 179 450-639 22-249 (314)
120 3poz_A Epidermal growth factor 100.0 3.9E-31 1.3E-35 274.5 8.6 176 451-640 15-217 (327)
121 3pg1_A Mitogen-activated prote 100.0 2.6E-30 9E-35 272.1 15.0 189 443-640 14-231 (362)
122 3lxl_A Tyrosine-protein kinase 100.0 4.8E-31 1.6E-35 273.7 9.1 179 451-640 23-227 (327)
123 3ttj_A Mitogen-activated prote 100.0 1.5E-30 5.2E-35 282.5 13.4 180 450-640 61-260 (464)
124 2a2a_A Death-associated protei 100.0 2.3E-30 7.7E-35 268.0 14.0 176 451-640 12-215 (321)
125 3dls_A PAS domain-containing s 100.0 1.1E-30 3.7E-35 271.9 11.6 178 449-640 22-227 (335)
126 1rjb_A FL cytokine receptor; k 100.0 1.1E-30 3.8E-35 272.9 11.6 181 449-640 43-272 (344)
127 3l9p_A Anaplastic lymphoma kin 100.0 3.4E-31 1.2E-35 279.3 7.8 179 450-639 70-283 (367)
128 4f0f_A Serine/threonine-protei 100.0 3.2E-30 1.1E-34 262.2 14.6 175 451-640 19-225 (287)
129 2clq_A Mitogen-activated prote 100.0 4.3E-30 1.5E-34 262.2 15.6 178 452-640 23-222 (295)
130 4eut_A Serine/threonine-protei 100.0 6.4E-31 2.2E-35 280.2 9.9 181 451-640 9-220 (396)
131 3c1x_A Hepatocyte growth facto 100.0 7.2E-31 2.5E-35 277.1 9.8 176 452-639 90-292 (373)
132 1xku_A Decorin; proteoglycan, 100.0 9.2E-29 3.1E-33 256.9 25.5 223 100-329 52-280 (330)
133 3fdn_A Serine/threonine-protei 100.0 1.7E-30 5.7E-35 263.2 12.1 177 450-640 8-204 (279)
134 3hko_A Calcium/calmodulin-depe 100.0 9E-31 3.1E-35 273.6 10.3 184 446-640 21-273 (345)
135 2ft3_A Biglycan; proteoglycan, 100.0 4.6E-29 1.6E-33 259.4 23.2 223 100-329 54-281 (332)
136 1nxk_A MAP kinase-activated pr 100.0 1.8E-30 6.3E-35 276.7 12.8 177 451-640 61-260 (400)
137 3oja_B Anopheles plasmodium-re 100.0 7.6E-30 2.6E-34 286.5 18.4 274 49-326 8-338 (597)
138 2a19_B Interferon-induced, dou 100.0 1.8E-30 6.2E-35 263.3 12.0 184 449-640 9-218 (284)
139 3ll6_A Cyclin G-associated kin 100.0 1.6E-30 5.4E-35 270.5 11.8 187 450-640 27-250 (337)
140 1mp8_A Focal adhesion kinase 1 100.0 1E-30 3.5E-35 265.1 10.0 176 450-639 14-214 (281)
141 3i6u_A CDS1, serine/threonine- 100.0 1.7E-30 5.6E-35 278.9 12.1 178 448-640 132-341 (419)
142 3gxj_A TGF-beta receptor type- 100.0 3.3E-31 1.1E-35 271.5 6.3 177 451-639 3-214 (303)
143 3p1a_A MYT1 kinase, membrane-a 100.0 8.4E-31 2.9E-35 269.9 9.4 175 451-639 57-251 (311)
144 4agu_A Cyclin-dependent kinase 100.0 2.6E-30 8.8E-35 266.1 12.9 176 451-640 3-200 (311)
145 3op5_A Serine/threonine-protei 100.0 1.4E-30 5E-35 274.3 11.2 181 450-640 34-258 (364)
146 3t9t_A Tyrosine-protein kinase 100.0 1.3E-30 4.5E-35 262.0 10.2 175 451-639 8-202 (267)
147 3eb0_A Putative uncharacterize 100.0 3.5E-30 1.2E-34 273.3 13.7 186 447-640 3-239 (383)
148 3mi9_A Cell division protein k 100.0 6E-30 2E-34 268.2 15.2 184 451-640 17-226 (351)
149 2vgo_A Serine/threonine-protei 100.0 4.7E-30 1.6E-34 260.6 13.8 176 451-640 14-209 (284)
150 3kmu_A ILK, integrin-linked ki 100.0 3.7E-30 1.3E-34 259.1 12.8 179 451-640 10-208 (271)
151 2w1i_A JAK2; chromosomal rearr 100.0 2E-30 6.8E-35 268.9 11.1 179 451-640 41-245 (326)
152 2ozo_A Tyrosine-protein kinase 100.0 4.3E-30 1.5E-34 288.3 14.6 169 458-640 343-537 (613)
153 3uqc_A Probable conserved tran 100.0 4E-30 1.4E-34 261.4 13.0 165 451-640 31-199 (286)
154 3kfa_A Tyrosine-protein kinase 100.0 2E-30 6.9E-35 263.8 10.8 178 449-639 11-209 (288)
155 1vzo_A Ribosomal protein S6 ki 100.0 8E-31 2.7E-35 275.2 8.1 176 451-640 54-259 (355)
156 1t46_A HOMO sapiens V-KIT hard 100.0 1.9E-30 6.5E-35 267.2 10.8 180 449-639 21-244 (313)
157 2z80_A TOLL-like receptor 2, v 100.0 6.7E-30 2.3E-34 268.0 15.1 259 52-329 22-318 (353)
158 2pvf_A Fibroblast growth facto 100.0 2.3E-30 8E-35 269.4 11.4 179 450-639 34-256 (334)
159 3g2f_A Bone morphogenetic prot 100.0 3.5E-30 1.2E-34 268.1 12.8 180 450-640 12-232 (336)
160 1x8b_A WEE1HU, WEE1-like prote 100.0 1.8E-30 6.2E-35 263.7 10.2 181 449-640 9-228 (289)
161 2owb_A Serine/threonine-protei 100.0 3.4E-30 1.2E-34 268.3 12.5 177 450-640 40-238 (335)
162 3pfq_A PKC-B, PKC-beta, protei 100.0 5.5E-30 1.9E-34 290.1 15.2 178 449-640 339-539 (674)
163 1xku_A Decorin; proteoglycan, 100.0 1E-28 3.4E-33 256.6 23.4 253 69-326 35-307 (330)
164 1p4o_A Insulin-like growth fac 100.0 5.5E-31 1.9E-35 272.5 6.3 183 445-638 19-235 (322)
165 3bhy_A Death-associated protei 100.0 5.9E-30 2E-34 259.6 13.8 176 451-640 5-208 (283)
166 2rku_A Serine/threonine-protei 100.0 4.4E-30 1.5E-34 262.2 12.9 176 451-640 15-212 (294)
167 3dtc_A Mitogen-activated prote 100.0 3.1E-30 1.1E-34 260.0 11.5 177 451-640 7-211 (271)
168 3oz6_A Mitogen-activated prote 100.0 4.6E-30 1.6E-34 272.9 13.2 179 448-640 6-228 (388)
169 1cm8_A Phosphorylated MAP kina 100.0 3.3E-30 1.1E-34 271.7 11.9 181 450-640 24-223 (367)
170 3f66_A Hepatocyte growth facto 100.0 2.9E-30 9.8E-35 264.0 11.1 177 451-639 25-228 (298)
171 2jam_A Calcium/calmodulin-depe 100.0 3.9E-30 1.3E-34 264.0 11.9 177 450-640 8-204 (304)
172 1wwl_A Monocyte differentiatio 100.0 5.5E-31 1.9E-35 271.4 5.5 264 50-327 21-311 (312)
173 2h34_A Serine/threonine-protei 100.0 5.8E-30 2E-34 263.4 13.1 177 450-640 33-232 (309)
174 3og7_A AKAP9-BRAF fusion prote 100.0 4E-30 1.4E-34 262.0 11.7 175 450-640 23-222 (289)
175 1ua2_A CAK, cell division prot 100.0 3.8E-30 1.3E-34 269.2 11.7 179 448-640 7-210 (346)
176 2buj_A Serine/threonine-protei 100.0 3E-30 1E-34 266.3 10.8 184 450-640 28-243 (317)
177 3kk8_A Calcium/calmodulin depe 100.0 8.3E-30 2.9E-34 258.6 13.9 177 450-640 5-204 (284)
178 1t4h_A Serine/threonine-protei 100.0 6.8E-30 2.3E-34 260.3 13.2 178 453-640 28-226 (290)
179 3mtl_A Cell division protein k 100.0 1.7E-30 6E-35 269.2 8.9 176 451-640 2-198 (324)
180 2y7j_A Phosphorylase B kinase 100.0 1E-29 3.6E-34 267.7 14.9 183 444-640 87-302 (365)
181 3e3p_A Protein kinase, putativ 100.0 1.8E-29 6.3E-34 265.3 16.7 191 444-640 16-229 (360)
182 3nsz_A CK II alpha, casein kin 100.0 1.1E-29 3.7E-34 263.7 14.7 172 451-640 36-228 (330)
183 3mdy_A Bone morphogenetic prot 100.0 8E-30 2.7E-34 265.3 13.8 181 447-639 33-248 (337)
184 3lxp_A Non-receptor tyrosine-p 100.0 5.3E-30 1.8E-34 264.8 12.1 175 453-640 33-234 (318)
185 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-29 4.6E-34 259.8 15.1 175 451-640 22-216 (303)
186 3dbq_A Dual specificity protei 100.0 4.7E-30 1.6E-34 268.1 11.8 174 451-640 9-217 (343)
187 3o6n_A APL1; leucine-rich repe 100.0 2.5E-29 8.6E-34 267.4 17.6 246 76-328 46-311 (390)
188 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.4E-30 8.4E-35 268.7 9.6 177 449-640 32-235 (329)
189 3brb_A Proto-oncogene tyrosine 100.0 7.5E-30 2.6E-34 262.9 13.1 186 448-639 31-246 (313)
190 1j1b_A Glycogen synthase kinas 100.0 5.9E-30 2E-34 274.7 12.8 180 451-640 54-254 (420)
191 2xir_A Vascular endothelial gr 100.0 2E-30 6.7E-35 267.4 8.4 190 441-640 17-248 (316)
192 2wtk_C Serine/threonine-protei 100.0 1.8E-29 6.3E-34 258.9 15.6 180 450-640 4-210 (305)
193 3pls_A Macrophage-stimulating 100.0 6.7E-30 2.3E-34 261.1 12.2 175 453-639 23-224 (298)
194 1ozn_A Reticulon 4 receptor; N 100.0 9.7E-29 3.3E-33 251.2 20.8 229 69-301 5-238 (285)
195 4aaa_A Cyclin-dependent kinase 100.0 7.9E-30 2.7E-34 265.0 13.0 177 450-640 24-222 (331)
196 3lij_A Calcium/calmodulin depe 100.0 9E-30 3.1E-34 279.3 14.0 177 450-640 36-234 (494)
197 3n9x_A Phosphotransferase; mal 100.0 5.4E-30 1.8E-34 276.1 11.9 180 450-639 25-248 (432)
198 1mqb_A Ephrin type-A receptor 100.0 5.7E-30 1.9E-34 266.4 11.6 177 451-640 44-248 (333)
199 4e7w_A Glycogen synthase kinas 100.0 6.7E-30 2.3E-34 272.0 12.4 181 451-640 40-239 (394)
200 2yex_A Serine/threonine-protei 100.0 5.4E-30 1.8E-34 258.8 11.0 177 450-640 6-205 (276)
201 3eqc_A Dual specificity mitoge 100.0 2.1E-30 7.3E-35 272.6 8.3 177 451-640 33-227 (360)
202 1byg_A CSK, protein (C-termina 100.0 2.1E-30 7.1E-35 262.4 7.9 176 450-639 20-211 (278)
203 2x7f_A TRAF2 and NCK-interacti 100.0 3.1E-30 1.1E-34 267.3 9.4 189 445-640 18-231 (326)
204 3cc6_A Protein tyrosine kinase 100.0 3.5E-30 1.2E-34 261.2 9.6 177 450-640 11-212 (281)
205 3lzb_A Epidermal growth factor 100.0 4.7E-30 1.6E-34 266.3 10.7 176 451-640 15-217 (327)
206 2qr7_A Ribosomal protein S6 ki 100.0 2.7E-30 9.1E-35 269.6 8.9 174 449-640 20-217 (342)
207 4fl3_A Tyrosine-protein kinase 100.0 4.1E-30 1.4E-34 289.2 11.1 169 457-640 375-570 (635)
208 2i6l_A Mitogen-activated prote 100.0 1E-29 3.4E-34 262.4 13.0 182 451-640 11-222 (320)
209 1csn_A Casein kinase-1; phosph 100.0 1.3E-29 4.6E-34 258.9 13.7 175 450-640 9-215 (298)
210 1u59_A Tyrosine-protein kinase 100.0 6E-30 2.1E-34 260.3 11.1 176 451-640 9-211 (287)
211 3q5i_A Protein kinase; CDPK, m 100.0 1.6E-29 5.6E-34 277.9 15.3 177 450-640 35-244 (504)
212 3byv_A Rhoptry kinase; malaria 100.0 6E-31 2.1E-35 278.6 3.7 187 450-640 72-310 (377)
213 2h6d_A 5'-AMP-activated protei 100.0 9.9E-30 3.4E-34 256.9 12.4 177 450-640 10-208 (276)
214 2j7t_A Serine/threonine-protei 100.0 3.8E-30 1.3E-34 263.5 9.3 178 450-640 18-219 (302)
215 3m2w_A MAP kinase-activated pr 100.0 1.3E-29 4.5E-34 259.4 13.2 172 451-640 17-195 (299)
216 3mwu_A Calmodulin-domain prote 100.0 1.1E-29 3.9E-34 278.0 13.4 177 450-640 21-219 (486)
217 3nyv_A Calmodulin-domain prote 100.0 7.5E-30 2.6E-34 279.4 12.0 177 450-640 25-224 (484)
218 1fvr_A Tyrosine-protein kinase 100.0 7.6E-30 2.6E-34 264.7 11.4 179 451-640 25-239 (327)
219 2w5a_A Serine/threonine-protei 100.0 3.2E-30 1.1E-34 260.9 8.2 182 450-640 5-213 (279)
220 2wqm_A Serine/threonine-protei 100.0 8.9E-30 3E-34 262.0 11.5 180 450-640 31-233 (310)
221 3com_A Serine/threonine-protei 100.0 2.2E-29 7.5E-34 259.5 14.4 177 449-640 27-222 (314)
222 2v62_A Serine/threonine-protei 100.0 6.7E-30 2.3E-34 267.2 10.6 179 451-640 37-257 (345)
223 1xbb_A Tyrosine-protein kinase 100.0 4.5E-30 1.5E-34 261.7 8.9 176 450-640 15-218 (291)
224 2ft3_A Biglycan; proteoglycan, 100.0 1.5E-28 5E-33 255.6 20.5 255 60-325 33-307 (332)
225 2id5_A Lingo-1, leucine rich r 100.0 6.9E-29 2.4E-33 271.3 18.8 251 76-327 57-335 (477)
226 2ycf_A Serine/threonine-protei 100.0 8.1E-30 2.8E-34 263.9 10.8 176 450-640 9-216 (322)
227 2r3i_A Cell division protein k 100.0 1.3E-29 4.5E-34 259.2 12.0 177 451-640 3-201 (299)
228 1phk_A Phosphorylase kinase; g 100.0 1.9E-29 6.5E-34 257.9 13.1 178 449-640 15-226 (298)
229 2zmd_A Dual specificity protei 100.0 1.5E-29 5.1E-34 268.9 12.7 174 451-640 56-264 (390)
230 2xrw_A Mitogen-activated prote 100.0 1.5E-29 5.2E-34 267.2 12.5 180 450-640 24-223 (371)
231 2fst_X Mitogen-activated prote 100.0 6.4E-30 2.2E-34 269.3 9.5 181 450-640 28-227 (367)
232 1b6c_B TGF-B superfamily recep 100.0 2.3E-29 8E-34 262.5 13.6 182 446-639 37-253 (342)
233 2vwi_A Serine/threonine-protei 100.0 5.4E-30 1.8E-34 262.4 8.6 181 449-640 13-224 (303)
234 2i1m_A Macrophage colony-stimu 100.0 3.7E-30 1.3E-34 267.6 7.5 181 448-639 43-263 (333)
235 2pml_X PFPK7, Ser/Thr protein 100.0 1.3E-29 4.4E-34 265.1 11.5 179 450-640 30-249 (348)
236 3lm5_A Serine/threonine-protei 100.0 1.9E-29 6.6E-34 261.7 12.1 182 447-640 24-230 (327)
237 1zy4_A Serine/threonine-protei 100.0 2.1E-29 7.3E-34 257.7 12.0 184 450-639 5-227 (303)
238 3kvw_A DYRK2, dual specificity 100.0 2E-29 6.8E-34 271.3 12.1 177 450-640 96-296 (429)
239 3qyz_A Mitogen-activated prote 100.0 2.2E-29 7.5E-34 265.3 12.2 180 450-640 26-229 (364)
240 4hgt_A Casein kinase I isoform 100.0 2.4E-29 8.3E-34 256.6 11.9 177 449-640 7-212 (296)
241 3j0a_A TOLL-like receptor 5; m 100.0 4.1E-28 1.4E-32 283.1 24.0 251 75-326 24-376 (844)
242 3t6q_A CD180 antigen; protein- 100.0 4.6E-28 1.6E-32 272.8 23.4 251 76-328 255-516 (606)
243 1blx_A Cyclin-dependent kinase 100.0 4.2E-29 1.4E-33 258.7 13.4 184 449-640 9-216 (326)
244 2jii_A Serine/threonine-protei 100.0 5.5E-30 1.9E-34 268.6 6.7 173 451-640 42-265 (352)
245 3rgf_A Cyclin-dependent kinase 100.0 3.6E-29 1.2E-33 267.5 13.0 176 453-640 22-233 (405)
246 3uzp_A CKI-delta, CKID, casein 100.0 3.7E-29 1.3E-33 255.4 12.2 176 450-640 8-212 (296)
247 3fme_A Dual specificity mitoge 100.0 1.4E-29 4.8E-34 257.7 8.9 179 450-640 6-210 (290)
248 2yfx_A Tyrosine-protein kinase 100.0 1.4E-29 4.7E-34 262.7 8.7 179 450-639 29-242 (327)
249 4fcg_A Uncharacterized protein 100.0 3.7E-28 1.3E-32 251.9 18.7 204 122-329 79-294 (328)
250 3an0_A Dual specificity mitoge 100.0 1.7E-29 5.9E-34 263.4 8.5 181 449-640 49-254 (340)
251 1u46_A ACK-1, activated CDC42 100.0 1.8E-29 6.3E-34 257.0 8.5 176 451-640 18-222 (291)
252 1wak_A Serine/threonine-protei 100.0 2.9E-29 9.8E-34 267.2 10.3 181 450-640 36-290 (397)
253 3t6q_A CD180 antigen; protein- 100.0 8.1E-28 2.8E-32 270.8 22.6 252 75-329 278-540 (606)
254 4exu_A Mitogen-activated prote 100.0 6.1E-29 2.1E-33 262.5 12.5 180 450-640 41-239 (371)
255 2wei_A Calmodulin-domain prote 100.0 1.1E-28 3.7E-33 251.0 13.9 178 449-640 20-219 (287)
256 3sv0_A Casein kinase I-like; t 100.0 1.1E-28 3.6E-33 268.3 14.2 176 450-640 6-210 (483)
257 4eco_A Uncharacterized protein 100.0 3E-28 1E-32 275.3 18.3 247 75-327 249-528 (636)
258 3q60_A ROP5B; pseudokinase, tr 100.0 6.8E-30 2.3E-34 269.9 4.4 183 451-640 62-290 (371)
259 2b9h_A MAP kinase FUS3, mitoge 100.0 5.8E-29 2E-33 260.7 11.4 180 450-640 10-220 (353)
260 2z81_A CD282 antigen, TOLL-lik 100.0 1.8E-28 6E-33 272.8 15.8 137 76-213 27-166 (549)
261 2z7x_B TOLL-like receptor 1, v 100.0 3.7E-28 1.3E-32 268.4 18.0 126 76-207 22-150 (520)
262 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.4E-28 2.2E-32 269.1 19.8 242 78-326 34-417 (562)
263 3zyi_A Leucine-rich repeat-con 100.0 1.5E-27 5E-32 258.8 21.7 233 67-301 56-303 (452)
264 2j0j_A Focal adhesion kinase 1 100.0 8.8E-29 3E-33 279.4 12.5 177 449-639 388-589 (656)
265 1ozn_A Reticulon 4 receptor; N 100.0 1.4E-27 4.9E-32 242.5 20.1 222 103-327 14-240 (285)
266 3coi_A Mitogen-activated prote 100.0 1.1E-28 3.7E-33 258.9 12.0 179 451-640 24-221 (353)
267 2iwi_A Serine/threonine-protei 100.0 2.4E-29 8.4E-34 259.0 6.8 181 446-640 26-236 (312)
268 1ziw_A TOLL-like receptor 3; i 100.0 1.2E-27 4.1E-32 273.1 21.4 251 75-326 25-310 (680)
269 4g8a_A TOLL-like receptor 4; l 100.0 1.7E-27 5.9E-32 269.0 22.2 158 49-208 12-186 (635)
270 3qa8_A MGC80376 protein; kinas 100.0 9.4E-29 3.2E-33 274.8 11.4 185 451-640 14-220 (676)
271 1z57_A Dual specificity protei 100.0 1.1E-28 3.9E-33 256.5 11.3 177 450-640 13-231 (339)
272 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.7E-29 2.3E-33 256.4 9.1 179 446-640 28-240 (319)
273 3zyj_A Leucine-rich repeat-con 100.0 3.5E-27 1.2E-31 255.0 22.5 233 67-301 45-292 (440)
274 3a99_A Proto-oncogene serine/t 100.0 7E-29 2.4E-33 256.6 8.8 180 447-640 39-246 (320)
275 3aln_A Dual specificity mitoge 100.0 2.7E-28 9.2E-33 252.9 13.1 178 451-640 22-226 (327)
276 3fhr_A MAP kinase-activated pr 100.0 2.2E-28 7.4E-33 254.7 12.1 179 450-640 27-226 (336)
277 2z7x_B TOLL-like receptor 1, v 99.9 7.7E-28 2.6E-32 265.8 16.4 243 79-328 4-390 (520)
278 2vx3_A Dual specificity tyrosi 99.9 2.7E-28 9.1E-33 258.7 11.9 180 449-640 52-255 (382)
279 4ecn_A Leucine-rich repeat pro 99.9 2.9E-28 9.8E-33 280.9 12.9 225 100-329 323-661 (876)
280 1q8y_A SR protein kinase; tran 99.9 1.6E-28 5.5E-33 259.3 9.1 180 451-640 19-232 (373)
281 3cek_A Dual specificity protei 99.9 3.4E-28 1.2E-32 250.6 11.2 176 449-640 26-236 (313)
282 3oja_B Anopheles plasmodium-re 99.9 3.1E-27 1.1E-31 265.2 19.9 246 75-327 75-360 (597)
283 3o6n_A APL1; leucine-rich repe 99.9 5E-27 1.7E-31 249.6 20.2 247 75-328 69-334 (390)
284 2vuw_A Serine/threonine-protei 99.9 2.7E-29 9.2E-34 261.6 2.5 182 450-639 19-273 (336)
285 2pzi_A Probable serine/threoni 99.9 1.4E-28 4.9E-33 280.1 8.8 178 451-640 80-273 (681)
286 2o6q_A Variable lymphocyte rec 99.9 6E-27 2E-31 236.0 19.6 212 57-301 2-218 (270)
287 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 3.9E-27 1.3E-31 262.7 20.1 249 75-329 52-445 (562)
288 2eu9_A Dual specificity protei 99.9 4.5E-28 1.6E-32 253.8 11.3 177 450-640 18-236 (355)
289 2z66_A Variable lymphocyte rec 99.9 3.7E-27 1.3E-31 242.0 17.5 237 60-303 7-263 (306)
290 3vq2_A TLR4, TOLL-like recepto 99.9 3.1E-27 1E-31 266.1 18.2 246 75-328 285-537 (606)
291 2rio_A Serine/threonine-protei 99.9 4.8E-28 1.6E-32 261.0 10.9 172 453-639 17-236 (434)
292 3j0a_A TOLL-like receptor 5; m 99.9 8.9E-27 3E-31 271.9 21.5 138 99-236 23-168 (844)
293 1ziw_A TOLL-like receptor 3; i 99.9 8.1E-27 2.8E-31 266.3 20.6 230 100-329 25-289 (680)
294 2z62_A TOLL-like receptor 4, v 99.9 7.3E-27 2.5E-31 236.1 17.3 206 101-327 29-239 (276)
295 3vq2_A TLR4, TOLL-like recepto 99.9 5.8E-27 2E-31 263.8 18.1 245 75-327 307-560 (606)
296 3p23_A Serine/threonine-protei 99.9 5.3E-28 1.8E-32 260.1 8.7 172 451-639 24-226 (432)
297 2dyl_A Dual specificity mitoge 99.9 1.2E-27 4.1E-32 246.8 11.0 178 450-640 24-226 (318)
298 3oja_A Leucine-rich immune mol 99.9 1E-26 3.5E-31 254.1 14.8 212 101-325 35-250 (487)
299 2z63_A TOLL-like receptor 4, v 99.9 6.2E-26 2.1E-30 253.3 21.2 111 218-329 375-487 (570)
300 1wwl_A Monocyte differentiatio 99.9 2.2E-27 7.4E-32 244.5 7.7 221 100-327 43-289 (312)
301 2z81_A CD282 antigen, TOLL-lik 99.9 1.8E-26 6.1E-31 256.6 15.4 179 100-278 26-210 (549)
302 2z63_A TOLL-like receptor 4, v 99.9 3.9E-26 1.3E-30 255.0 16.8 247 75-329 282-535 (570)
303 2o6q_A Variable lymphocyte rec 99.9 4.7E-25 1.6E-29 222.1 22.8 200 125-327 17-220 (270)
304 1p9a_G Platelet glycoprotein I 99.9 2.7E-25 9.3E-30 226.1 20.9 203 119-326 5-209 (290)
305 4g8a_A TOLL-like receptor 4; l 99.9 2.5E-25 8.6E-30 251.3 22.9 254 75-329 76-559 (635)
306 3o53_A Protein LRIM1, AGAP0063 99.9 1.2E-26 4.2E-31 239.4 11.0 213 100-325 34-250 (317)
307 3o53_A Protein LRIM1, AGAP0063 99.9 3.3E-26 1.1E-30 236.2 14.1 219 101-328 11-230 (317)
308 2z80_A TOLL-like receptor 2, v 99.9 1.4E-26 4.8E-31 242.8 11.3 228 75-305 52-318 (353)
309 3oja_A Leucine-rich immune mol 99.9 1.9E-26 6.6E-31 251.9 12.8 200 121-329 31-231 (487)
310 3bz5_A Internalin-J, INLJ; leu 99.9 7.7E-25 2.6E-29 237.1 24.2 230 75-327 42-279 (457)
311 3rfs_A Internalin B, repeat mo 99.9 1.5E-25 5.2E-30 225.9 16.6 214 103-329 22-239 (272)
312 3rfs_A Internalin B, repeat mo 99.9 1.5E-25 5E-30 226.1 16.1 204 99-313 40-247 (272)
313 4fmz_A Internalin; leucine ric 99.9 3.4E-25 1.2E-29 231.5 18.7 240 75-329 88-328 (347)
314 4fmz_A Internalin; leucine ric 99.9 6.4E-25 2.2E-29 229.4 20.1 238 75-329 66-304 (347)
315 4glp_A Monocyte differentiatio 99.9 2.5E-25 8.5E-30 228.9 15.9 220 101-326 65-308 (310)
316 3bz5_A Internalin-J, INLJ; leu 99.9 1.2E-24 3.9E-29 235.8 21.7 233 75-329 64-303 (457)
317 1o6v_A Internalin A; bacterial 99.9 1.2E-24 3.9E-29 237.0 20.7 237 75-328 68-325 (466)
318 3dzo_A Rhoptry kinase domain; 99.9 1.8E-26 6.2E-31 247.0 6.1 186 451-640 78-314 (413)
319 4azs_A Methyltransferase WBDD; 99.9 5.8E-26 2E-30 251.8 9.8 165 458-639 241-434 (569)
320 3g06_A SSPH2 (leucine-rich rep 99.9 7.9E-25 2.7E-29 244.3 16.7 253 50-329 12-301 (622)
321 1o6v_A Internalin A; bacterial 99.9 4.6E-24 1.6E-28 232.3 21.2 237 75-328 46-303 (466)
322 1jl5_A Outer protein YOPM; leu 99.9 7.8E-24 2.7E-28 229.0 21.4 226 75-327 131-372 (454)
323 1jl5_A Outer protein YOPM; leu 99.9 9.5E-24 3.2E-28 228.4 21.8 222 75-327 91-312 (454)
324 4glp_A Monocyte differentiatio 99.9 8.2E-25 2.8E-29 225.0 12.6 198 100-302 91-308 (310)
325 1p9a_G Platelet glycoprotein I 99.9 7.3E-24 2.5E-28 215.6 19.4 198 75-301 10-208 (290)
326 3m19_A Variable lymphocyte rec 99.9 2.9E-24 9.8E-29 213.9 15.4 159 124-303 35-194 (251)
327 2xwt_C Thyrotropin receptor; s 99.9 3.5E-24 1.2E-28 211.6 15.7 199 101-322 32-236 (239)
328 2xwt_C Thyrotropin receptor; s 99.9 5.2E-24 1.8E-28 210.4 15.8 181 125-329 32-222 (239)
329 3m19_A Variable lymphocyte rec 99.9 2.6E-23 8.8E-28 207.0 20.0 179 125-327 15-194 (251)
330 2z62_A TOLL-like receptor 4, v 99.9 1.7E-23 5.7E-28 211.4 17.1 206 76-304 29-240 (276)
331 1h6u_A Internalin H; cell adhe 99.9 8.9E-24 3E-28 216.9 15.3 196 120-328 37-233 (308)
332 3cvr_A Invasion plasmid antige 99.9 2.2E-24 7.5E-29 237.9 10.2 213 50-311 33-253 (571)
333 2ca6_A RAN GTPase-activating p 99.9 3E-25 1E-29 235.6 0.3 229 100-328 32-319 (386)
334 1h6u_A Internalin H; cell adhe 99.9 6.2E-23 2.1E-27 210.6 16.4 189 101-302 42-231 (308)
335 3goz_A Leucine-rich repeat-con 99.9 1.1E-24 3.8E-29 229.1 -0.5 246 80-327 3-299 (362)
336 2ast_B S-phase kinase-associat 99.9 6.1E-25 2.1E-29 228.5 -2.6 253 68-329 40-310 (336)
337 3cvr_A Invasion plasmid antige 99.9 2.4E-22 8.3E-27 221.6 16.4 181 125-329 60-247 (571)
338 2o6s_A Variable lymphocyte rec 99.9 1.7E-22 5.9E-27 195.0 12.4 162 124-313 28-190 (208)
339 4ay9_X Follicle-stimulating ho 99.9 4.8E-22 1.6E-26 207.9 16.4 219 100-323 30-257 (350)
340 2o6s_A Variable lymphocyte rec 99.9 5.3E-22 1.8E-26 191.5 15.0 173 127-330 10-183 (208)
341 3goz_A Leucine-rich repeat-con 99.9 2.1E-23 7.1E-28 219.4 3.4 224 105-328 3-269 (362)
342 4b8c_D Glucose-repressible alc 99.9 2.9E-23 9.9E-28 237.0 2.2 262 30-327 130-406 (727)
343 1zar_A RIO2 kinase; serine kin 99.9 1.5E-22 5.1E-27 204.7 6.9 144 445-614 84-245 (282)
344 3g06_A SSPH2 (leucine-rich rep 99.9 8.3E-21 2.9E-25 211.9 20.9 198 101-326 41-255 (622)
345 2ast_B S-phase kinase-associat 99.9 1.2E-22 4.1E-27 211.1 4.0 218 101-322 48-282 (336)
346 2ca6_A RAN GTPase-activating p 99.9 1.9E-23 6.6E-28 221.6 -2.4 231 75-305 32-320 (386)
347 3en9_A Glycoprotease, O-sialog 99.8 5.2E-22 1.8E-26 218.8 8.4 159 454-637 339-532 (540)
348 1m9s_A Internalin B; cell inva 99.8 2.4E-21 8.1E-26 216.0 13.5 194 101-308 22-217 (605)
349 1h6t_A Internalin B; cell adhe 99.8 2.6E-21 8.8E-26 196.8 11.9 185 104-302 28-214 (291)
350 3e6j_A Variable lymphocyte rec 99.8 1.1E-20 3.9E-25 185.0 15.6 133 124-278 40-173 (229)
351 4ay9_X Follicle-stimulating ho 99.8 1E-20 3.4E-25 197.8 16.0 193 124-317 30-231 (350)
352 1h6t_A Internalin B; cell adhe 99.8 1.2E-20 4.2E-25 191.8 13.3 193 123-328 23-216 (291)
353 1z7x_W Ribonuclease inhibitor; 99.8 4.8E-23 1.6E-27 223.7 -6.0 252 76-327 4-299 (461)
354 2xot_A Amphoterin-induced prot 99.8 1.8E-20 6E-25 196.9 13.2 152 150-301 41-202 (361)
355 2v70_A SLIT-2, SLIT homolog 2 99.8 3.8E-20 1.3E-24 180.1 14.6 153 127-303 14-168 (220)
356 2v9t_B SLIT homolog 2 protein 99.8 8.2E-20 2.8E-24 177.7 16.5 150 128-301 15-165 (220)
357 1m9s_A Internalin B; cell inva 99.8 4.4E-20 1.5E-24 205.8 16.0 168 100-279 43-212 (605)
358 1z7x_W Ribonuclease inhibitor; 99.8 1.3E-22 4.6E-27 220.2 -5.4 251 76-326 86-384 (461)
359 1xeu_A Internalin C; cellular 99.8 1.8E-20 6.1E-25 187.6 10.0 171 122-303 17-187 (263)
360 2v9t_B SLIT homolog 2 protein 99.8 1.6E-19 5.4E-24 175.7 16.4 152 151-326 14-166 (220)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 1.4E-19 4.9E-24 176.0 16.1 153 151-327 14-168 (220)
362 3e6j_A Variable lymphocyte rec 99.8 2.2E-19 7.5E-24 175.9 17.2 153 127-304 22-175 (229)
363 2xot_A Amphoterin-induced prot 99.8 4.7E-20 1.6E-24 193.6 12.4 173 151-326 21-203 (361)
364 1dce_A Protein (RAB geranylger 99.8 2.6E-22 9.1E-27 222.3 -6.9 180 121-305 346-550 (567)
365 1xeu_A Internalin C; cellular 99.8 4.8E-20 1.6E-24 184.5 7.9 167 100-279 19-187 (263)
366 1dce_A Protein (RAB geranylger 99.8 1.2E-22 4.1E-27 225.1 -12.5 179 145-329 346-550 (567)
367 1zth_A RIO1 serine protein kin 99.8 1.2E-19 4.3E-24 181.0 8.5 139 453-614 49-222 (258)
368 4ezg_A Putative uncharacterize 99.8 3.9E-19 1.3E-23 169.8 11.0 153 121-301 41-194 (197)
369 4ezg_A Putative uncharacterize 99.8 1E-18 3.5E-23 166.9 11.7 157 143-327 39-196 (197)
370 1w8a_A SLIT protein; signaling 99.7 9.7E-18 3.3E-22 159.4 13.4 128 127-278 11-140 (192)
371 1w8a_A SLIT protein; signaling 99.7 1.8E-17 6.3E-22 157.4 13.7 126 175-302 11-140 (192)
372 4b8c_D Glucose-repressible alc 99.7 1.5E-18 5E-23 198.2 6.3 188 106-302 207-405 (727)
373 2ell_A Acidic leucine-rich nuc 99.7 2.8E-17 9.5E-22 152.6 11.6 135 122-278 22-161 (168)
374 2ell_A Acidic leucine-rich nuc 99.7 4.6E-17 1.6E-21 151.1 9.6 134 100-253 24-160 (168)
375 2wfh_A SLIT homolog 2 protein 99.7 2E-16 6.9E-21 150.3 13.8 128 198-326 13-140 (193)
376 2o6r_A Variable lymphocyte rec 99.7 2.8E-16 9.6E-21 147.1 14.1 130 198-327 10-139 (177)
377 2je0_A Acidic leucine-rich nuc 99.7 4.7E-17 1.6E-21 147.8 8.5 128 123-272 16-148 (149)
378 2wfh_A SLIT homolog 2 protein 99.7 2.8E-16 9.4E-21 149.4 13.6 127 127-301 13-139 (193)
379 3sb4_A Hypothetical leucine ri 99.7 1.4E-16 4.7E-21 164.9 11.1 169 147-318 100-327 (329)
380 2o6r_A Variable lymphocyte rec 99.7 4.9E-16 1.7E-20 145.5 13.8 70 235-304 71-140 (177)
381 3ogk_B Coronatine-insensitive 99.6 4.1E-18 1.4E-22 190.8 -3.6 227 100-327 270-528 (592)
382 1ds9_A Outer arm dynein; leuci 99.6 1.9E-18 6.4E-23 165.2 -5.6 134 119-255 13-155 (198)
383 2je0_A Acidic leucine-rich nuc 99.6 2E-16 6.7E-21 143.6 8.0 129 100-248 17-148 (149)
384 4gyi_A RIO2 kinase; protein ki 99.6 1.1E-16 3.9E-21 166.0 5.0 142 451-614 95-268 (397)
385 3ogk_B Coronatine-insensitive 99.6 1.2E-17 4.3E-22 186.9 -3.3 112 215-326 377-502 (592)
386 1a9n_A U2A', U2A'; complex (nu 99.6 6E-16 2.1E-20 144.7 8.5 131 120-277 15-153 (176)
387 1ds9_A Outer arm dynein; leuci 99.6 5.1E-18 1.7E-22 162.2 -7.1 135 144-282 14-158 (198)
388 1a9n_A U2A', U2A'; complex (nu 99.6 1.1E-15 3.7E-20 143.0 8.0 133 143-301 14-153 (176)
389 3sb4_A Hypothetical leucine ri 99.6 6.9E-15 2.3E-19 152.1 10.8 175 118-295 87-328 (329)
390 3g39_A Variable lymphocyte rec 99.6 1.4E-14 4.7E-19 134.6 11.7 107 197-303 11-117 (170)
391 2r9u_A Variable lymphocyte rec 99.5 4E-14 1.4E-18 131.9 11.9 105 198-302 15-119 (174)
392 3g39_A Variable lymphocyte rec 99.5 9.7E-14 3.3E-18 128.8 12.1 109 217-328 10-118 (170)
393 4fdw_A Leucine rich hypothetic 99.5 8.5E-13 2.9E-17 139.7 19.3 218 99-326 134-359 (401)
394 2r9u_A Variable lymphocyte rec 99.5 2E-13 6.7E-18 127.3 12.1 108 217-327 13-120 (174)
395 4fdw_A Leucine rich hypothetic 99.5 1.3E-12 4.4E-17 138.3 18.9 237 77-325 137-383 (401)
396 2p1m_B Transport inhibitor res 99.4 2E-15 6.8E-20 169.0 -5.2 179 146-326 287-495 (594)
397 2p1m_B Transport inhibitor res 99.4 2E-15 6.7E-20 169.0 -6.9 208 116-325 281-519 (594)
398 3un9_A NLR family member X1; l 99.3 2E-14 6.8E-19 150.8 -5.4 87 217-303 156-254 (372)
399 2ifg_A High affinity nerve gro 99.3 3E-12 1E-16 133.2 10.4 92 116-209 24-117 (347)
400 2ifg_A High affinity nerve gro 99.3 4.5E-12 1.5E-16 131.8 10.7 101 199-301 12-116 (347)
401 3un9_A NLR family member X1; l 99.3 1.2E-13 4E-18 144.9 -4.6 159 148-327 72-254 (372)
402 3tm0_A Aminoglycoside 3'-phosp 99.3 1.8E-11 6.1E-16 121.9 11.0 148 446-610 9-213 (263)
403 1nd4_A Aminoglycoside 3'-phosp 99.1 6.9E-11 2.4E-15 117.2 6.6 130 460-611 29-215 (264)
404 2ra8_A Uncharacterized protein 99.0 6.9E-11 2.4E-15 122.9 1.2 186 117-323 132-341 (362)
405 3dxp_A Putative acyl-COA dehyd 98.9 2.2E-09 7.4E-14 112.0 10.6 144 456-610 43-248 (359)
406 2ra8_A Uncharacterized protein 98.9 4.6E-10 1.6E-14 116.6 3.6 180 124-326 107-321 (362)
407 4fs7_A Uncharacterized protein 98.9 5E-08 1.7E-12 103.0 18.4 126 75-205 71-218 (394)
408 4fs7_A Uncharacterized protein 98.8 3.9E-08 1.3E-12 103.9 16.4 217 95-322 157-376 (394)
409 4gt6_A Cell surface protein; l 98.6 1.2E-06 4E-11 92.4 19.6 86 234-322 282-367 (394)
410 3rw6_A Nuclear RNA export fact 98.6 3.8E-09 1.3E-13 104.3 -0.4 92 120-212 137-237 (267)
411 3sg8_A APH(2'')-ID; antibiotic 98.6 4.7E-08 1.6E-12 99.3 6.7 168 456-639 25-283 (304)
412 3rw6_A Nuclear RNA export fact 98.5 2.1E-08 7.2E-13 98.9 2.9 79 121-201 167-257 (267)
413 3d1u_A Putative fructosamine-3 98.5 4.2E-07 1.4E-11 91.3 11.2 140 456-609 20-215 (288)
414 4gt6_A Cell surface protein; l 98.5 4.5E-06 1.5E-10 87.9 18.3 86 233-321 258-343 (394)
415 3r70_A Aminoglycoside phosphot 98.4 5.3E-07 1.8E-11 92.2 8.8 137 452-611 38-238 (320)
416 1io0_A Tropomodulin; LRR prote 98.4 4E-08 1.4E-12 92.0 0.2 121 116-253 28-164 (185)
417 1io0_A Tropomodulin; LRR prote 98.4 5.9E-08 2E-12 90.8 0.6 109 100-208 36-164 (185)
418 4h09_A Hypothetical leucine ri 98.2 4.4E-05 1.5E-09 79.7 19.0 86 233-320 233-318 (379)
419 4gkh_A Aminoglycoside 3'-phosp 98.2 5.6E-06 1.9E-10 82.1 11.4 136 458-611 31-224 (272)
420 3tdw_A Gentamicin resistance p 98.2 3.4E-06 1.2E-10 85.5 9.8 138 456-611 24-225 (306)
421 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.3E-05 4.3E-10 83.3 9.5 143 454-611 44-244 (362)
422 3ats_A Putative uncharacterize 98.0 1.3E-05 4.5E-10 83.0 8.4 82 457-543 26-121 (357)
423 4h09_A Hypothetical leucine ri 98.0 0.00016 5.5E-09 75.4 16.7 218 98-322 111-343 (379)
424 2olc_A MTR kinase, methylthior 97.8 7.5E-05 2.6E-09 78.5 11.1 75 456-540 35-120 (397)
425 3f7w_A Putative fructosamine-3 97.7 0.00014 4.8E-09 72.8 11.0 76 455-542 19-97 (288)
426 2q83_A YTAA protein; 2635576, 97.6 7.2E-05 2.4E-09 76.7 7.2 147 457-610 38-252 (346)
427 3e4g_A ATP synthase subunit S, 97.4 4.6E-05 1.6E-09 69.6 1.8 33 102-134 63-95 (176)
428 3e4g_A ATP synthase subunit S, 97.3 5.9E-05 2E-09 68.9 1.3 83 124-206 61-150 (176)
429 1zyl_A Hypothetical protein YI 97.2 0.0036 1.2E-07 63.5 14.2 166 439-611 9-224 (328)
430 3jr1_A Putative fructosamine-3 97.2 0.0022 7.4E-08 64.7 12.3 138 456-606 41-232 (312)
431 2ppq_A HSK, HK, homoserine kin 97.1 0.0016 5.4E-08 66.0 9.7 166 440-610 6-217 (322)
432 2pyw_A Uncharacterized protein 97.0 0.002 6.8E-08 68.1 10.2 31 580-611 232-262 (420)
433 3rfe_A Platelet glycoprotein I 97.0 0.00084 2.9E-08 58.3 6.0 36 241-276 32-67 (130)
434 3rfe_A Platelet glycoprotein I 97.0 0.001 3.6E-08 57.7 6.2 35 173-207 32-67 (130)
435 3csv_A Aminoglycoside phosphot 96.8 0.013 4.4E-07 59.5 13.4 32 580-611 183-218 (333)
436 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00039 1.3E-08 64.7 0.8 89 235-323 65-168 (197)
437 1pgv_A TMD-1, tropomodulin TMD 96.6 0.0003 1E-08 65.5 -0.0 87 118-204 35-135 (197)
438 3dxq_A Choline/ethanolamine ki 96.4 0.0071 2.4E-07 60.6 8.2 137 456-611 23-203 (301)
439 1nw1_A Choline kinase (49.2 KD 96.3 0.0098 3.3E-07 62.9 9.0 73 456-542 78-159 (429)
440 2qg7_A Ethanolamine kinase PV0 96.2 0.02 6.7E-07 61.0 11.0 73 457-542 114-188 (458)
441 3feg_A Choline/ethanolamine ki 96.0 0.035 1.2E-06 57.4 11.3 141 457-610 56-254 (379)
442 3c5i_A Choline kinase; choline 95.7 0.0092 3.1E-07 61.7 5.5 73 457-542 39-121 (369)
443 3i1a_A Spectinomycin phosphotr 95.4 0.026 8.8E-07 57.6 7.3 32 580-611 206-237 (339)
444 3f2s_A CK, chetk-alpha, cholin 94.1 0.16 5.5E-06 52.7 9.4 31 580-610 244-280 (401)
445 3mes_A Choline kinase; malaria 92.3 0.35 1.2E-05 50.6 8.7 73 457-542 76-157 (424)
446 2ks1_B Epidermal growth factor 81.6 0.15 5.1E-06 34.2 -1.4 26 367-393 15-40 (44)
447 2k1k_A Ephrin type-A receptor 80.9 0.083 2.9E-06 34.3 -2.7 29 362-390 9-37 (38)
448 3cxl_A N-chimerin; SH2, RHO-GA 80.7 0.33 1.1E-05 51.6 0.0 64 455-521 146-218 (463)
449 2l2t_A Receptor tyrosine-prote 78.2 0.13 4.6E-06 34.4 -2.5 25 368-393 15-39 (44)
450 2yle_A Protein spire homolog 1 76.3 2.8 9.6E-05 39.1 4.9 93 540-637 33-130 (229)
451 2jwa_A Receptor tyrosine-prote 73.0 0.16 5.4E-06 34.0 -3.2 27 366-393 14-40 (44)
452 4ano_A ESSB; membrane protein, 70.9 10 0.00035 35.3 7.4 74 527-611 60-134 (219)
453 4ann_A ESSB; membrane protein, 63.8 20 0.00067 33.3 7.7 53 555-612 78-130 (215)
454 3g15_A CK, chetk-alpha, cholin 52.1 6.9 0.00024 40.3 2.8 30 581-610 245-280 (401)
455 1iij_A ERBB-2 receptor protein 36.0 1.1 3.8E-05 28.3 -3.8 18 374-391 17-34 (35)
456 1cja_A Protein (actin-fragmin 35.8 2.5E+02 0.0084 27.8 10.8 139 462-612 79-239 (342)
457 2lz0_A Uncharacterized protein 35.4 46 0.0016 26.5 4.7 37 119-156 15-51 (100)
458 2lz0_A Uncharacterized protein 35.2 71 0.0024 25.3 5.8 41 232-273 12-52 (100)
459 2klu_A T-cell surface glycopro 22.9 8.1 0.00028 27.9 -1.7 17 369-385 13-29 (70)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.2e-43 Score=366.35 Aligned_cols=292 Identities=22% Similarity=0.307 Sum_probs=259.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC--CCCCCcccEEeCC----CcEEEEEecCCCCCC--CCCCCCcCCC
Q 006570 28 QLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCY--LPSSSSLKIVCTN----SRVTELTVIGNKSSP--AHSPKPTFGK 99 (640)
Q Consensus 28 ~~~~~~~~~l~~~k~~~~~~~~l~~W~~~~~~C~--~~~~~~~gv~C~~----~~v~~l~l~~~~~~~--~~~~~~~~~~ 99 (640)
.|.++|++||++||+++.+|..+.+|+.+++||. |. ||.|+. ++|+.|+|+++.+++ .++. .....
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~-----gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l 75 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWL-----GVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANL 75 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCST-----TEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGC
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCc-----ceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCC
Confidence 5788999999999999988878899988889998 76 899975 789999999999976 4432 23445
Q ss_pred ccccccccCc-cCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 006570 100 FSASQQSLSA-NFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 100 ~~l~~l~l~~-n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 178 (640)
+.|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|.+++.+|..|.++++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 8899999995 888889999999999999999999999989999999999999999999999999999999999999999
Q ss_pred ccCccCCccCCC-ccCcC-cCCeeEccCCCCCCCCCCcc--cccceeecccCcccccCCccccCCCCccEEEccCCcccC
Q 006570 179 LADNLLNGSVPD-LQRLV-LLEELNLGGNDFGPKFPSLS--KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (640)
Q Consensus 179 L~~N~l~~~~~~-~~~l~-~L~~L~L~~N~l~~~~~~~~--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 254 (640)
|++|++++.+|. +..++ +|++|+|++|++++.+|..+ .+|+.|++++|++++.+|..|.++++|+.|+|++|++++
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceee
Confidence 999999987776 88887 99999999999998887753 238999999999999999999999999999999999998
Q ss_pred cCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccc-ccCc
Q 006570 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC-LSGV 327 (640)
Q Consensus 255 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~-l~~~ 327 (640)
.+|. +..+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.+|.. ..+++|+.+++++|. ++|.
T Consensus 236 ~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 236 DLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp BGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred ecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCC
Confidence 7776 788999999999999999899999999999999999999999999987 788899999999997 7774
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.6e-42 Score=350.33 Aligned_cols=179 Identities=22% Similarity=0.356 Sum_probs=151.7
Q ss_pred cCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|.+.+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~------- 85 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV------- 85 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-------
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEe-------
Confidence 46777899999999999999853 47789999998655555678999999999999999999999995
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccC----------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWK----------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL 594 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl 594 (640)
+++..++|||||++|+|.++|+... ....++|.+++.|+.|||+||+|||+ ++||||||||+|||+
T Consensus 86 -~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl 161 (299)
T 4asz_A 86 -EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLV 161 (299)
T ss_dssp -SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred -eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEE
Confidence 3456899999999999999997532 24579999999999999999999999 799999999999999
Q ss_pred cCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 595 DKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 595 ~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
++++.+||+|||+|+........ +.. +.++|||||||++|||+| |.
T Consensus 162 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~ 228 (299)
T 4asz_A 162 GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228 (299)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCC
Confidence 99999999999999765322110 344 999999999999999998 63
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=350.20 Aligned_cols=179 Identities=22% Similarity=0.341 Sum_probs=147.8
Q ss_pred cCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|...+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~------- 113 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT------- 113 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-------
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-------
Confidence 45666789999999999999864 47889999998655555678999999999999999999999995
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCC------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCce
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKK------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI 592 (640)
++...+||||||++|+|.++++.... ..+++|.+++.|+.|||+||+|||+ .+||||||||+||
T Consensus 114 -~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NI 189 (329)
T 4aoj_A 114 -EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNC 189 (329)
T ss_dssp -SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGE
T ss_pred -ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhE
Confidence 34568999999999999999975321 3469999999999999999999998 7999999999999
Q ss_pred eecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 593 LLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 593 Ll~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
|+++++.+||+|||+|+........ +.. +.++|||||||++|||+| |.
T Consensus 190 Ll~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~ 258 (329)
T 4aoj_A 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258 (329)
T ss_dssp EEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred EECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCC
Confidence 9999999999999999865322110 334 999999999999999998 63
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=7.3e-41 Score=340.82 Aligned_cols=175 Identities=22% Similarity=0.337 Sum_probs=147.2
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.+++...+.||+|+||+||+|++. ..||||+++.... ...++|.+|+++|++++|||||+++|+|. .
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~---------~ 103 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT---------K 103 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---------S
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE---------C
Confidence 456777899999999999999975 3699999975432 23467999999999999999999999873 2
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
+..+||||||++|+|.++++. ....++|.+++.|+.|||+||+|||+ .+||||||||+|||+++++.+||+|||+
T Consensus 104 ~~~~iVmEy~~gGsL~~~l~~--~~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGl 178 (307)
T 3omv_A 104 DNLAIVTQWCEGSSLYKHLHV--QETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGL 178 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHT--SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSS
T ss_pred CeEEEEEEcCCCCCHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccC
Confidence 347999999999999999974 34569999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCC----------Cc------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN----------TL------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~----------~~------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+...... +. ... +.++|||||||+||||+||.
T Consensus 179 a~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~ 234 (307)
T 3omv_A 179 ATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234 (307)
T ss_dssp CBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCC
Confidence 98653211 00 123 77999999999999999985
No 5
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.5e-41 Score=344.52 Aligned_cols=177 Identities=20% Similarity=0.314 Sum_probs=148.9
Q ss_pred CCCCCCccccCCccceEEEEeC------CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
+++..+.||+|+||+||+|++. +++.||||+++... ....++|.+|++++++++|||||+++|+|.
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~------- 99 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT------- 99 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-------
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE-------
Confidence 3445688999999999999863 46789999997543 334678999999999999999999999995
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCc
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTEN 591 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~N 591 (640)
.....++|||||++|+|.++|+.... ...++|.+++.|+.|||+||+|||+ .+||||||||+|
T Consensus 100 -~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~N 175 (308)
T 4gt4_A 100 -KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRN 175 (308)
T ss_dssp -SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGG
T ss_pred -ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccc
Confidence 34558999999999999999975321 2469999999999999999999999 799999999999
Q ss_pred eeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 592 ILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 592 ILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||+++++.+||+|||+|+........ +.. +.++|||||||+||||+| |
T Consensus 176 ILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g 244 (308)
T 4gt4_A 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG 244 (308)
T ss_dssp EEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred eEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCC
Confidence 99999999999999999865322110 344 999999999999999998 5
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.9e-40 Score=342.06 Aligned_cols=175 Identities=20% Similarity=0.360 Sum_probs=154.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+.|+..+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||++++++. +++.
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~--------~~~~ 145 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL--------VGDE 145 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEE--------ETTE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEE--------ECCE
Confidence 4688889999999999999995 569999999998766666778999999999999999999999986 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
+|||||||++|+|.+++.. ..+++.++..|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+
T Consensus 146 ~~ivmEy~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 146 LWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EEEEECCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCce
Confidence 9999999999999999964 358999999999999999999999 799999999999999999999999999998
Q ss_pred cccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ +.. +.++||||+||++|||+||.
T Consensus 219 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~ 267 (346)
T 4fih_A 219 QVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267 (346)
T ss_dssp ECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred ecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 76432211 333 99999999999999999995
No 7
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.3e-40 Score=378.11 Aligned_cols=295 Identities=28% Similarity=0.354 Sum_probs=209.7
Q ss_pred cccCCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCCcccEEeCCCcEEEEEecCCCCCCC---CCC--------
Q 006570 25 SIGQLTPSETRILFQVQKLLEYPEVLQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPA---HSP-------- 93 (640)
Q Consensus 25 ~~~~~~~~~~~~l~~~k~~~~~~~~l~~W~~~~~~C~~~~~~~~gv~C~~~~v~~l~l~~~~~~~~---~~~-------- 93 (640)
+++++.++|++||++||+++.||..+++|+.++|||.|. ||+|+.++|+.|+|++++++|. +++
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~-----gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFD-----GVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGST-----TEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred ccccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCc-----ceEECCCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 344556889999999999998877889999888999998 8999989999999999988764 221
Q ss_pred --------------CCcCCCccccccccCccCCCChhhh--hhcCCCCCcEeecccCcCcCCCCccc-cCCCCCCEEEcc
Q 006570 94 --------------KPTFGKFSASQQSLSANFNIDRFFT--ILTKLSNLKVLSLVSLGLWGPLPSKI-NRFWSLEVLNIS 156 (640)
Q Consensus 94 --------------~~~~~~~~l~~l~l~~n~~~~~~~~--~l~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~Ls 156 (640)
........|++|+|++|.+.+.+|. .++++++|++|+|++|.+.+.+|..+ .++++|++|+|+
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 1122347888899999988888887 88899999999999998888888765 788888888888
Q ss_pred cCcccccCCcc---ccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCccccc
Q 006570 157 SNFIYGEIPME---ITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSE 231 (640)
Q Consensus 157 ~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~ 231 (640)
+|.+++..|.. +.++++|++|++++|.+++.+|. ..+++|++|+|++|++++.+|.. +++|++|+|++|++++.
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~ 238 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV-SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGD 238 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC-TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSC
T ss_pred CCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc-ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCc
Confidence 88888777766 66777777777777777665543 56667777777777776666553 46666677777777666
Q ss_pred CCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCC-CCCCEEeccCccCcccCCCCccC
Q 006570 232 IPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS-AKLNFVEISHNLLIGKLPSCIGS 310 (640)
Q Consensus 232 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~ 310 (640)
+|..++++++|++|+|++|++++.+|.. .+++|++|+|++|++++.+|..+... ++|+.|++++|++++.+|..++.
T Consensus 239 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~ 316 (768)
T 3rgz_A 239 FSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS 316 (768)
T ss_dssp HHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGG
T ss_pred ccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhc
Confidence 6666666666666666666666555543 55555555555555555555555443 55555555555555555555555
Q ss_pred CCCCceeeeccccccCc
Q 006570 311 NSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 311 ~~~l~~l~l~~N~l~~~ 327 (640)
+++|+.|++++|.++|.
T Consensus 317 l~~L~~L~L~~n~l~~~ 333 (768)
T 3rgz_A 317 CSLLESLALSSNNFSGE 333 (768)
T ss_dssp CTTCCEEECCSSEEEEE
T ss_pred CCCccEEECCCCcccCc
Confidence 55555555555555543
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.3e-40 Score=343.70 Aligned_cols=178 Identities=17% Similarity=0.266 Sum_probs=148.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++. +.
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~--------~~ 95 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE--------EN 95 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------ET
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEE--------EC
Confidence 6799999999999999999994 5699999999975432 23467999999999999999999999885 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
+.+|||||||++|+|.++++. +....+++.+++.|+.||+.||+|||+ .+||||||||+|||+++++.+||+|||+
T Consensus 96 ~~~yiVmEy~~gg~L~~~i~~-~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGl 171 (350)
T 4b9d_A 96 GSLYIVMDYCEGGDLFKRINA-QKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGI 171 (350)
T ss_dssp TEEEEEEECCTTCBHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred CEEEEEEeCCCCCcHHHHHHH-cCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEccccc
Confidence 568999999999999999975 234567899999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+...... +. +.. +.++||||+||++|||+||.
T Consensus 172 a~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~ 222 (350)
T 4b9d_A 172 ARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222 (350)
T ss_dssp ESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 98764321 11 334 89999999999999999984
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=6.8e-40 Score=332.90 Aligned_cols=176 Identities=18% Similarity=0.270 Sum_probs=153.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+++|++++|||||++++++. +
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~--------~ 103 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ--------D 103 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE--------C
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------e
Confidence 4699999999999999999994 57999999999753 2345678999999999999999999999875 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
.+.+|+|||||++|+|.+++++ ...+++.++..|+.||+.||+|||+ .+||||||||+|||+++++.+||+|||
T Consensus 104 ~~~~yivmEy~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 104 DEKLYFGLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 5679999999999999999975 3469999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCC----------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT----------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~----------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+....... . +.. +.++||||+||++|||+||.
T Consensus 178 la~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~ 231 (311)
T 4aw0_A 178 TAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 231 (311)
T ss_dssp TCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSS
T ss_pred CceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9986532211 0 333 88999999999999999994
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=343.70 Aligned_cols=175 Identities=20% Similarity=0.360 Sum_probs=155.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+.|+..+.||+|+||.||+|+. .+|+.||||++........+.+.+|+++|++++|||||++++++. .++.
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~--------~~~~ 222 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL--------VGDE 222 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEE--------ETTE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEE--------ECCE
Confidence 5688899999999999999995 569999999998766666778999999999999999999999986 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
+|||||||++|+|.++++. ..+++.++..|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+|+
T Consensus 223 ~~iVmEy~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 223 LWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp EEEEEECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccce
Confidence 9999999999999999964 358999999999999999999999 799999999999999999999999999998
Q ss_pred cccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ +.. +.++|||||||++|||++|.
T Consensus 296 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~ 344 (423)
T 4fie_A 296 QVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344 (423)
T ss_dssp ECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred ECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 76432211 333 99999999999999999995
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-39 Score=327.43 Aligned_cols=179 Identities=21% Similarity=0.283 Sum_probs=148.1
Q ss_pred CCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 454 DPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 454 ~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
...+.||+|+||+||+|+. .++..||+|++..... ...+.|.+|+++|++++|||||++++++..... ....+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~----~~~~~ 104 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK----GKKCI 104 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEET----TEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccC----CCcEE
Confidence 3456799999999999995 4688999999975432 234679999999999999999999998863221 34568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-CCceEEeCCCCCc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLSGYNIPL 609 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl~DfGla~ 609 (640)
|||||||++|+|.+++++ ...+++..+..|+.||+.||+|||+. .++||||||||+|||++. ++.+||+|||+|+
T Consensus 105 ~lvmEy~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 105 VLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 999999999999999975 35689999999999999999999983 123999999999999984 7999999999998
Q ss_pred cccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ ... +.++|||||||++|||+||.
T Consensus 181 ~~~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~ 226 (290)
T 3fpq_A 181 LKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSE 226 (290)
T ss_dssp GCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eCCCCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 65432211 334 89999999999999999995
No 12
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-39 Score=333.26 Aligned_cols=177 Identities=22% Similarity=0.351 Sum_probs=144.1
Q ss_pred CCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHH--HHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSL--MQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+|.+.+.||+|+||+||+|++ +|+.||||+++... .+++ ..|+..+.+++|||||+++|+|..... ....
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~----~~~~ 75 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNG----TWTQ 75 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS----SSEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCC----CceE
Confidence 466778999999999999998 58999999997542 2333 445566678899999999999974221 2245
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC-----CCCeeccCCCCCceeecCCCceEEeC
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV-----APGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+|||||||++|+|.++++. ..++|..+.+|+.|+++||+|||+++ .++||||||||+|||+|+++++||+|
T Consensus 76 ~~lV~Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 76 LWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EEEEecCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 8999999999999999974 35899999999999999999999742 35999999999999999999999999
Q ss_pred CCCCccccCCCC------------c---------cC------C-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT------------L---------SF------H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~------------~---------~~------~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|+....... . +. . +.++|||||||++|||+||+
T Consensus 152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~ 215 (303)
T 3hmm_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC 215 (303)
T ss_dssp CTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTB
T ss_pred CCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCC
Confidence 999976532211 0 11 2 56899999999999999984
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1e-38 Score=319.79 Aligned_cols=175 Identities=22% Similarity=0.363 Sum_probs=143.5
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++. +
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~--------~ 84 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK--------S 84 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE--------C
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE--------E
Confidence 5799999999999999999994 579999999997532 234567999999999999999999999875 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
.+..|+||||| +|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 85 ~~~~~ivmEy~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFG 157 (275)
T 3hyh_A 85 KDEIIMVIEYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp SSEEEEEEECC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSS
T ss_pred CCEEEEEEeCC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecC
Confidence 56799999999 6799999975 4569999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCCc----------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+........ +.. +.++||||+||++|||+||.
T Consensus 158 la~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~ 209 (275)
T 3hyh_A 158 LSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209 (275)
T ss_dssp CC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCC
Confidence 99865432211 222 67999999999999999995
No 14
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.3e-39 Score=338.81 Aligned_cols=190 Identities=21% Similarity=0.325 Sum_probs=158.9
Q ss_pred CCHHHHHHHhcCCCCCCccccCCccceEEEEeCC------CcEEEEEEeecccC-CChHHHHHHHHHHhcCCC-ccccee
Q 006570 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTD------GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRH-RHLVSI 512 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~l 512 (640)
++.++++...++|++.+.||+|+||+||+|++.. ++.||||+++.... ...++|.+|+++|.+++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4566777778899999999999999999998532 36899999975432 234679999999999965 899999
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccC-------------CCCCCCHHHHHHHHHHHHHHhhhcccCCC
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVA 579 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ 579 (640)
+|+|.. .+..+++|||||++|+|.++|+..+ ....++|.+++.|+.|||+||+|||+
T Consensus 134 ~g~~~~-------~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~--- 203 (353)
T 4ase_A 134 LGACTK-------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--- 203 (353)
T ss_dssp EEEECC-------TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---
T ss_pred EEEEEe-------cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---
Confidence 999852 3456899999999999999997532 13458999999999999999999999
Q ss_pred CCeeccCCCCCceeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-
Q 006570 580 PGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL- 638 (640)
Q Consensus 580 ~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt- 638 (640)
.+||||||||+|||+++++.+||+|||+|+........ +.. +.++|||||||+||||+|
T Consensus 204 ~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~ 283 (353)
T 4ase_A 204 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 283 (353)
T ss_dssp TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred CCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhC
Confidence 79999999999999999999999999999876432211 334 999999999999999998
Q ss_pred cC
Q 006570 639 CC 640 (640)
Q Consensus 639 G~ 640 (640)
|.
T Consensus 284 G~ 285 (353)
T 4ase_A 284 GA 285 (353)
T ss_dssp SC
T ss_pred CC
Confidence 63
No 15
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5.3e-39 Score=330.26 Aligned_cols=171 Identities=19% Similarity=0.270 Sum_probs=146.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
+.|+..+.||+|+||+||+|+. .+|+.||||+++.... ..+|+++|++++|||||++++++. ++..
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~--------~~~~ 124 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVR--------EGPW 124 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEE--------ETTE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEE--------ECCE
Confidence 4567778899999999999995 5689999999975432 247999999999999999999885 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC-ceEEeCCCCC
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGYNIP 608 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~-~~kl~DfGla 608 (640)
+|||||||++|+|.++++. ...+++.++..|+.||+.||+|||+ .+||||||||+|||++.++ .+||+|||+|
T Consensus 125 ~~ivmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla 198 (336)
T 4g3f_A 125 VNIFMELLEGGSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHA 198 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTC
T ss_pred EEEEEeccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCC
Confidence 8999999999999999975 3469999999999999999999998 7999999999999999987 6999999999
Q ss_pred ccccCCC-------------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN-------------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~-------------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+...... +. +.. +.++|||||||++|||+||.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~ 253 (336)
T 4g3f_A 199 LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253 (336)
T ss_dssp EEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCc
Confidence 8653211 11 334 89999999999999999995
No 16
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.2e-39 Score=329.13 Aligned_cols=176 Identities=19% Similarity=0.264 Sum_probs=144.1
Q ss_pred cCCCCCCccccCCccceEEEEe----CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|++.+.||+|+||+||+|+. .+++.||||+++... .....++.+|+++|++++|||||++++++.
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~------- 96 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQ------- 96 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEE-------
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-------
Confidence 4688899999999999999984 247899999997532 223357889999999999999999999885
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+.+.+|+|||||++|+|.+++++ ...+++.++..++.|++.||+|||+ .+||||||||+|||+++++.+||+|
T Consensus 97 -~~~~~~ivmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 97 -TEGKLYLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp -ETTEEEEEECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEES
T ss_pred -ECCEEEEEEEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecc
Confidence 34568999999999999999975 3469999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCC--------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT--------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~--------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|+....... . +.. +.++||||+||++|||+||.
T Consensus 170 FGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~ 223 (304)
T 3ubd_A 170 FGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 223 (304)
T ss_dssp SEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCC
Confidence 999986432211 0 334 89999999999999999995
No 17
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.1e-38 Score=323.06 Aligned_cols=185 Identities=17% Similarity=0.352 Sum_probs=145.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCC----C
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH----P 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~----~ 524 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++....... .
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4688899999999999999994 5789999999975432 23467899999999999999999999986432110 1
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
......|+|||||++|+|.++++........++..++.|+.|++.||+|||+ .+||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEcc
Confidence 1234579999999999999999864333456677889999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCC--------------------Cc---------cCC-CCccceehhhHHHHHHhh
Q 006570 605 YNIPLPSKVRN--------------------TL---------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 605 fGla~~~~~~~--------------------~~---------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||+|+...... +. +.. +.++|||||||++|||++
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~ 225 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc
Confidence 99998653211 11 334 899999999999999986
No 18
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.4e-37 Score=351.56 Aligned_cols=293 Identities=14% Similarity=0.130 Sum_probs=253.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCCC---------CCCCCCCCCCCCCCCCCcccEEeCC-CcEEEEEecCCCCCCCCCCCCcC
Q 006570 28 QLTPSETRILFQVQKLLEYPEV---------LQGWTDWTNFCYLPSSSSLKIVCTN-SRVTELTVIGNKSSPAHSPKPTF 97 (640)
Q Consensus 28 ~~~~~~~~~l~~~k~~~~~~~~---------l~~W~~~~~~C~~~~~~~~gv~C~~-~~v~~l~l~~~~~~~~~~~~~~~ 97 (640)
+....|+.||.+++.+++++.+ ..+|+.++++|.|. .+.||+|+. +||++|+|++++++|.+++ ...
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~--~~~GV~C~~~~~V~~L~L~~~~l~g~lp~-~l~ 102 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWG--AQPGVSLNSNGRVTGLSLEGFGASGRVPD-AIG 102 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTT--CCTTEEECTTCCEEEEECTTSCCEEEECG-GGG
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCccccc--CCCCeEEcCCCCEEEEEecCcccCCcCCh-HHh
Confidence 3345799999999999875531 23799889999992 123899965 7999999999999887763 234
Q ss_pred CCccccccccCccCC-----------------------------------------------------------------
Q 006570 98 GKFSASQQSLSANFN----------------------------------------------------------------- 112 (640)
Q Consensus 98 ~~~~l~~l~l~~n~~----------------------------------------------------------------- 112 (640)
..+.|+.|+|++|.+
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 468999999998833
Q ss_pred -------------CChhhhhhcCCCCCcEeecccCcCcCC-----------------CCcccc--CCCCCCEEEcccCcc
Q 006570 113 -------------IDRFFTILTKLSNLKVLSLVSLGLWGP-----------------LPSKIN--RFWSLEVLNISSNFI 160 (640)
Q Consensus 113 -------------~~~~~~~l~~l~~L~~L~L~~n~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N~l 160 (640)
.+ +|..|+++++|++|+|++|.+++. +|..++ ++++|++|+|++|.+
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 24 788899999999999999999986 999999 999999999999999
Q ss_pred cccCCccccCCCCCCEEEccCcc-CCc-cCCC-ccCc------CcCCeeEccCCCCCCCCCC--c---ccccceeecccC
Q 006570 161 YGEIPMEITSLKNLKSIVLADNL-LNG-SVPD-LQRL------VLLEELNLGGNDFGPKFPS--L---SKNIVSVILRNN 226 (640)
Q Consensus 161 ~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~-~~~l------~~L~~L~L~~N~l~~~~~~--~---~~~L~~L~l~~N 226 (640)
.+.+|..|+++++|++|+|++|+ ++| .+|. ++++ ++|++|+|++|+++ .+|. . +++|+.|++++|
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N 340 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYN 340 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSC
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCC
Confidence 99999999999999999999998 998 6664 7666 99999999999999 6666 3 789999999999
Q ss_pred cccccCCccccCCCCccEEEccCCcccCcCCccccCCCC-CcEEEccCCcCCccCCccccCCC--CCCEEeccCccCccc
Q 006570 227 SLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPS-ILYLNLAGNQLSEALPVNISCSA--KLNFVEISHNLLIGK 303 (640)
Q Consensus 227 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~~~--~L~~L~ls~N~l~~~ 303 (640)
+++|.+| .|+++++|+.|+|++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|+.|++++|++++.
T Consensus 341 ~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~ 417 (636)
T 4eco_A 341 QLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSV 417 (636)
T ss_dssp CCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred cCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCc
Confidence 9999999 9999999999999999999 78888999999 999999999998 6888887765 899999999999999
Q ss_pred CCCCcc-------CCCCCceeeeccccccCcc
Q 006570 304 LPSCIG-------SNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 304 ~p~~~~-------~~~~l~~l~l~~N~l~~~~ 328 (640)
+|..+. .+.+|+.|++++|+++..+
T Consensus 418 ~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp 449 (636)
T 4eco_A 418 DGKNFDPLDPTPFKGINVSSINLSNNQISKFP 449 (636)
T ss_dssp TTCSSCTTCSSCCCCCCEEEEECCSSCCCSCC
T ss_pred chhhhcccccccccCCCCCEEECcCCccCcCC
Confidence 999888 7889999999999998543
No 19
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.5e-36 Score=347.97 Aligned_cols=291 Identities=14% Similarity=0.143 Sum_probs=219.8
Q ss_pred cCCCHHHHHHHHHHHHhCCCCCCCCCCCCCC-----CC--CCCCC----CCc---ccEEeC-CCcEEEEEecCCCCCCCC
Q 006570 27 GQLTPSETRILFQVQKLLEYPEVLQGWTDWT-----NF--CYLPS----SSS---LKIVCT-NSRVTELTVIGNKSSPAH 91 (640)
Q Consensus 27 ~~~~~~~~~~l~~~k~~~~~~~~l~~W~~~~-----~~--C~~~~----~~~---~gv~C~-~~~v~~l~l~~~~~~~~~ 91 (640)
++...+|+.||++||+++.+| +|+.++ +| |.|.- ..| .||.|+ .+||+.|+|++++++|.+
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEE
T ss_pred cccchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcC
Confidence 344568999999999999876 786544 66 88800 012 489998 489999999999998877
Q ss_pred CCCCcCCCcccccccc-CccCCCCh-------------------------------------------------------
Q 006570 92 SPKPTFGKFSASQQSL-SANFNIDR------------------------------------------------------- 115 (640)
Q Consensus 92 ~~~~~~~~~~l~~l~l-~~n~~~~~------------------------------------------------------- 115 (640)
++ .....+.|+.|+| ++|.+.|.
T Consensus 340 p~-~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 340 PD-AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp CG-GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred ch-HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 63 2344689999999 66643332
Q ss_pred ---------------------hhhhhcCCCCCcEeecccCcCcC-----------------CCCcccc--CCCCCCEEEc
Q 006570 116 ---------------------FFTILTKLSNLKVLSLVSLGLWG-----------------PLPSKIN--RFWSLEVLNI 155 (640)
Q Consensus 116 ---------------------~~~~l~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~L~L 155 (640)
+|..|++|++|++|+|++|.+++ .+|..++ ++++|++|+|
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~L 498 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVEL 498 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred cccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEEC
Confidence 67778888888888888888877 3787777 8888888888
Q ss_pred ccCcccccCCccccCCCCCCEEEccCcc-CCc-cCCC-ccCcC-------cCCeeEccCCCCCCCCCC--c---ccccce
Q 006570 156 SSNFIYGEIPMEITSLKNLKSIVLADNL-LNG-SVPD-LQRLV-------LLEELNLGGNDFGPKFPS--L---SKNIVS 220 (640)
Q Consensus 156 s~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~-~~~l~-------~L~~L~L~~N~l~~~~~~--~---~~~L~~ 220 (640)
++|.+.+.+|..|+++++|+.|+|++|+ +++ .+|. +.+++ +|++|+|++|+++ .+|. . +++|+.
T Consensus 499 s~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~ 577 (876)
T 4ecn_A 499 YNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGL 577 (876)
T ss_dssp ESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCE
T ss_pred cCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCE
Confidence 8888888888888888888888888887 887 5553 55444 8888888888887 5665 2 678888
Q ss_pred eecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCC-CcEEEccCCcCCccCCccccCCCC--CCEEeccC
Q 006570 221 VILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPS-ILYLNLAGNQLSEALPVNISCSAK--LNFVEISH 297 (640)
Q Consensus 221 L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~~~~--L~~L~ls~ 297 (640)
|+|++|+++ .+| .|+++++|+.|+|++|+++ .+|..+.++++ |+.|+|++|+++ .+|..+..++. |+.|++++
T Consensus 578 L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~ 653 (876)
T 4ecn_A 578 LDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSY 653 (876)
T ss_dssp EECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCS
T ss_pred EECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcC
Confidence 888888887 777 7888888888888888888 67777888887 888888888887 57777766654 88888888
Q ss_pred ccCcccCCCCc---c--CCCCCceeeeccccccCc
Q 006570 298 NLLIGKLPSCI---G--SNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 298 N~l~~~~p~~~---~--~~~~l~~l~l~~N~l~~~ 327 (640)
|++++.+|... . .+.+|+.|++++|+++..
T Consensus 654 N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~l 688 (876)
T 4ecn_A 654 NKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKF 688 (876)
T ss_dssp SCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSC
T ss_pred CcCCCccccchhhhccccCCCcCEEEccCCcCCcc
Confidence 88877666432 2 234677778888777743
No 20
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=318.77 Aligned_cols=181 Identities=16% Similarity=0.272 Sum_probs=150.7
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||+||+|+. .+|+.||||+++.... ...+.+.+|+++|++++|||||++++++... ..+.+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPT--VPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS--SCTTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecc--cccccC
Confidence 4688899999999999999994 5799999999975432 2245788999999999999999999987532 122345
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
..+|||||||+ |+|.+++.. ...+++.++..|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~---~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecce
Confidence 67999999996 689999964 4579999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCC------------Cc---------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN------------TL---------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~------------~~---------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+...... +. +. . +.++||||+||++|||+||.
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~ 260 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTS
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCC
Confidence 98652210 00 22 3 88999999999999999984
No 21
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.3e-35 Score=336.77 Aligned_cols=272 Identities=27% Similarity=0.350 Sum_probs=195.0
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
.++.|++++|.+++.++. .....+.|+.|+|++|.+.+.+|..+.++++|++|+|++|.+++.+|..+..+++|++|+|
T Consensus 395 ~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 473 (768)
T 3rgz_A 395 TLQELYLQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLIL 473 (768)
T ss_dssp CCCEEECCSSEEEEECCG-GGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CccEEECCCCccccccCH-HHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEe
Confidence 344555555544332211 1122355666666666666666666666666666666666666666666666666666666
Q ss_pred ccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCccccc
Q 006570 156 SSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSE 231 (640)
Q Consensus 156 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~ 231 (640)
++|++++.+|..+.++++|++|+|++|++++.+|. ++.+++|++|+|++|++++.+|.. +++|+.|++++|+++|.
T Consensus 474 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 553 (768)
T 3rgz_A 474 DFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGT 553 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESB
T ss_pred cCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCc
Confidence 66666666666666666666666666666666554 666666666666666666666654 45666666666666655
Q ss_pred CCc----------------------------------------------------------------------cccCCCC
Q 006570 232 IPS----------------------------------------------------------------------GLKNFDQ 241 (640)
Q Consensus 232 ~p~----------------------------------------------------------------------~~~~l~~ 241 (640)
+|. .+.++++
T Consensus 554 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~ 633 (768)
T 3rgz_A 554 IPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGS 633 (768)
T ss_dssp CCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBC
T ss_pred CChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhcccc
Confidence 554 4445678
Q ss_pred ccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecc
Q 006570 242 LKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTW 321 (640)
Q Consensus 242 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~ 321 (640)
|+.|||++|+++|.+|..++++++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..++.|+.+++++
T Consensus 634 L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~ 713 (768)
T 3rgz_A 634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713 (768)
T ss_dssp CCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCS
T ss_pred ccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCccCCCCC-----CCCccccccccCCCC
Q 006570 322 NCLSGVNTKYQH-----PYSFCRKEALAVKPP 348 (640)
Q Consensus 322 N~l~~~~~~~~~-----~~~~~~~~~~~~~~~ 348 (640)
|+++|.+|.... +.++.+++.+|+.|.
T Consensus 714 N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l 745 (768)
T 3rgz_A 714 NNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL 745 (768)
T ss_dssp SEEEEECCSSSSGGGSCGGGGCSCTEEESTTS
T ss_pred CcccccCCCchhhccCCHHHhcCCchhcCCCC
Confidence 999998875321 234556666666543
No 22
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5e-35 Score=322.62 Aligned_cols=177 Identities=17% Similarity=0.236 Sum_probs=149.0
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHH---HHHHHhcCCCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQ---HVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.++|++.+.||+|+||+||+|+. .+|+.||||+++... ........+ ++++++.++|||||++++++.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~----- 262 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH----- 262 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE-----
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE-----
Confidence 35788999999999999999994 569999999997532 223333333 466778889999999998874
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
+...+|+|||||+||+|.++|.. ...+++..+..|+.||+.||+|||+ .+||||||||+|||+|.+|.+||
T Consensus 263 ---~~~~lylVmEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL 333 (689)
T 3v5w_A 263 ---TPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRI 333 (689)
T ss_dssp ---CSSEEEEEECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEE
T ss_pred ---ECCEEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEe
Confidence 45679999999999999999975 3569999999999999999999999 79999999999999999999999
Q ss_pred eCCCCCccccCCCCc---------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL---------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~---------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+|+........ .. . +.++||||+||++|||++|.
T Consensus 334 ~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~ 388 (689)
T 3v5w_A 334 SDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388 (689)
T ss_dssp CCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 999999876433221 22 3 88999999999999999994
No 23
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=5.6e-35 Score=303.24 Aligned_cols=266 Identities=18% Similarity=0.244 Sum_probs=218.5
Q ss_pred cCCCHHHHHHHHHHHHhC-CCC-CCCCCC----CCCCCCCCCCCCCcccEEeCC----------CcEEEEEecCCCCCCC
Q 006570 27 GQLTPSETRILFQVQKLL-EYP-EVLQGW----TDWTNFCYLPSSSSLKIVCTN----------SRVTELTVIGNKSSPA 90 (640)
Q Consensus 27 ~~~~~~~~~~l~~~k~~~-~~~-~~l~~W----~~~~~~C~~~~~~~~gv~C~~----------~~v~~l~l~~~~~~~~ 90 (640)
.++..+|++||++||+.+ .++ ..+.+| +.+.++|.|. |+.|+. .+|+.|+|+++.+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~-----g~~~~~~~~~l~~~~~~~l~~L~L~~n~l--- 93 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRT-----GRALKATADLLEDATQPGRVALELRSVPL--- 93 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSH-----HHHHHHHHHHHHHHTSTTCCEEEEESSCC---
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccC-----CcchhhhHHHHhcccccceeEEEccCCCc---
Confidence 445568999999999988 345 356788 3457889887 798842 5677777766655
Q ss_pred CCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccC
Q 006570 91 HSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITS 170 (640)
Q Consensus 91 ~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 170 (640)
. .+|..+.++++|++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..+.+
T Consensus 94 ----------------------~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~ 148 (328)
T 4fcg_A 94 ----------------------P-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIAS 148 (328)
T ss_dssp ----------------------S-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGG
T ss_pred ----------------------h-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhc
Confidence 2 34556777888888888888886 78888888888888888888888 78888888
Q ss_pred CCCCCEEEccCccCCccCCC-cc---------CcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCcccc
Q 006570 171 LKNLKSIVLADNLLNGSVPD-LQ---------RLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLK 237 (640)
Q Consensus 171 l~~L~~L~L~~N~l~~~~~~-~~---------~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~ 237 (640)
+++|++|+|++|++.+.+|. +. ++++|++|+|++|+++ .+|.. +++|+.|+|++|++++ +|..++
T Consensus 149 l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~ 226 (328)
T 4fcg_A 149 LNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIH 226 (328)
T ss_dssp CTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGG
T ss_pred CcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhc
Confidence 88888888888887777765 44 3888999999999887 45543 6788889999999984 677899
Q ss_pred CCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCcee
Q 006570 238 NFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTV 317 (640)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l 317 (640)
++++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..+..+++|+.|++++|++.+.+|..++.+++++.+
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l 306 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCII 306 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEE
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccccCc
Q 006570 318 VSTWNCLSGV 327 (640)
Q Consensus 318 ~l~~N~l~~~ 327 (640)
++..|.+...
T Consensus 307 ~l~~~~~~~l 316 (328)
T 4fcg_A 307 LVPPHLQAQL 316 (328)
T ss_dssp ECCGGGSCC-
T ss_pred eCCHHHHHHH
Confidence 9987766543
No 24
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6.9e-35 Score=305.13 Aligned_cols=174 Identities=15% Similarity=0.228 Sum_probs=147.6
Q ss_pred HHhcCCCCCCccccCCccceEEEEeC----CCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 522 (640)
...+.|++.+.||+|+||+||+|+.+ +++.||||++... ....++.+|+++|+.+ +|||||++++++.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~----- 90 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFR----- 90 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEE-----
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEE-----
Confidence 34578999999999999999999742 4678999998643 3456788999999998 6999999998875
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-CceE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAK 601 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~k 601 (640)
..+.+|+|||||++|+|.++++ .+++.++..++.|++.||+|||+ .+||||||||+|||++.+ +.+|
T Consensus 91 ---~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~k 158 (361)
T 4f9c_A 91 ---KNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYA 158 (361)
T ss_dssp ---ETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEE
T ss_pred ---ECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEE
Confidence 3457999999999999999984 38899999999999999999999 799999999999999887 8999
Q ss_pred EeCCCCCccccCC------------------------------------CCc---------c-CC-CCccceehhhHHHH
Q 006570 602 LSGYNIPLPSKVR------------------------------------NTL---------S-FH-TDRSSLYKIILIIC 634 (640)
Q Consensus 602 l~DfGla~~~~~~------------------------------------~~~---------~-~~-~~~~DvwS~Gvvl~ 634 (640)
|+|||+|+..... ++. + .. +.++||||+||++|
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ 238 (361)
T 4f9c_A 159 LVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238 (361)
T ss_dssp ECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred ECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHH
Confidence 9999999753211 011 2 23 88999999999999
Q ss_pred HHhhcC
Q 006570 635 VITLCC 640 (640)
Q Consensus 635 elltG~ 640 (640)
||+||.
T Consensus 239 ell~G~ 244 (361)
T 4f9c_A 239 SLLSGR 244 (361)
T ss_dssp HHHHTC
T ss_pred HHHHCC
Confidence 999994
No 25
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.5e-34 Score=320.66 Aligned_cols=178 Identities=15% Similarity=0.262 Sum_probs=154.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|++.+.||+|+||+||+|+. .+|+.||+|++........+.+.+|+++|+.++|||||++++++. +..
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~--------~~~ 227 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE--------DDN 227 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEE--------CSS
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEE--------ECC
Confidence 36799999999999999999995 569999999997654445678899999999999999999999885 456
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC--CceEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA--LTAKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~--~~~kl~DfG 606 (640)
.+|+|||||++|+|.+++.. ....+++.++..|+.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||
T Consensus 228 ~~~iv~E~~~gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 228 EMVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp EEEEEEECCCCCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred EEEEEEeecCCCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeecc
Confidence 79999999999999999964 34568999999999999999999999 799999999999999864 899999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|+........ +.. +.++||||+||++|||++|.
T Consensus 303 ~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~ 353 (573)
T 3uto_A 303 LTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 353 (573)
T ss_dssp SCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSC
T ss_pred ceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 99876543211 333 88999999999999999985
No 26
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.7e-33 Score=288.79 Aligned_cols=229 Identities=24% Similarity=0.337 Sum_probs=216.5
Q ss_pred ccccccccCccCCCC--hhhhhhcCCCCCcEeeccc-CcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCE
Q 006570 100 FSASQQSLSANFNID--RFFTILTKLSNLKVLSLVS-LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKS 176 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~--~~~~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 176 (640)
..++.|+|++|.+.+ .+|..|.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 378899999999998 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---cc-ccceeecccCcccccCCccccCCCCccEEEccCCc
Q 006570 177 IVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SK-NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNN 251 (640)
Q Consensus 177 L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 251 (640)
|+|++|.+++.+|. +..+++|++|+|++|++++.+|.. ++ +|+.|++++|++++.+|..+..++ |+.|+|++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999988776 999999999999999999888865 34 899999999999999999999998 9999999999
Q ss_pred ccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccCC
Q 006570 252 FVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTK 330 (640)
Q Consensus 252 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~~ 330 (640)
+++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|++++|++++.+|..+..+++|+.|++++|+++|..|.
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC
Confidence 9999999999999999999999999987776 88899999999999999999999999999999999999999988764
No 27
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.3e-33 Score=289.82 Aligned_cols=195 Identities=29% Similarity=0.542 Sum_probs=165.7
Q ss_pred CCCCCHHHHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEE
Q 006570 438 FRGFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHC 516 (640)
Q Consensus 438 ~~~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~ 516 (640)
.+.++++++....++|+..+.||+|+||.||+|+..+++.||||++..... .....+.+|++++++++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456888999999999999999999999999999988899999999975432 2334799999999999999999999998
Q ss_pred EecccCCCCCCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec
Q 006570 517 ILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (640)
Q Consensus 517 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~ 595 (640)
. .....++||||+++|+|.++++... ....+++..+..++.|++.||+|||+.+.++|+||||||+||+++
T Consensus 97 ~--------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 97 M--------TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168 (326)
T ss_dssp C--------CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC
T ss_pred e--------cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC
Confidence 5 3445799999999999999998643 234599999999999999999999994444999999999999999
Q ss_pred CCCceEEeCCCCCccccCCCCc------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 596 KALTAKLSGYNIPLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ~~~~~kl~DfGla~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.++.+||+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 232 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 232 (326)
T ss_dssp TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCC
Confidence 9999999999999765322111 233 88999999999999999984
No 28
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.3e-33 Score=289.26 Aligned_cols=188 Identities=33% Similarity=0.552 Sum_probs=160.8
Q ss_pred CHHHHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 442 SLEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 442 ~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
++.++...+++|+..+.||+|+||.||+|+..+++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---- 105 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD---- 105 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC----
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc----
Confidence 3345556788999999999999999999998889999999988665556678999999999999999999999884
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCce
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTA 600 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~ 600 (640)
.....++||||+++|+|.+++.... ....++|.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+
T Consensus 106 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~ 178 (321)
T 2qkw_B 106 ----ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVP 178 (321)
T ss_dssp ----CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCE
T ss_pred ----CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCE
Confidence 3456899999999999999997532 23468999999999999999999999 799999999999999999999
Q ss_pred EEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||+++....... + +.. +.++|||||||++|||+||.
T Consensus 179 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~ 238 (321)
T 2qkw_B 179 KITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238 (321)
T ss_dssp EECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCC
T ss_pred EEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCC
Confidence 9999999975432110 0 233 88999999999999999984
No 29
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.3e-32 Score=281.51 Aligned_cols=176 Identities=18% Similarity=0.367 Sum_probs=154.6
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|+..+.||+|+||+||+|+ ..+++.||||++........+.+.+|+.++++++||||+++++++. .+.
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~~~ 90 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL--------VGD 90 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE--------ETT
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEE--------ECC
Confidence 3579999999999999999998 4678999999998766666788999999999999999999999886 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 91 ELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp EEEEEEECCTTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEECCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 68999999999999999974 258999999999999999999999 69999999999999999999999999998
Q ss_pred ccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ +.. +.++|||||||++|||+||.
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 213 (297)
T 3fxz_A 164 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213 (297)
T ss_dssp EECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSS
T ss_pred eecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 765432211 334 88999999999999999984
No 30
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.98 E-value=2.3e-32 Score=282.95 Aligned_cols=186 Identities=19% Similarity=0.315 Sum_probs=160.1
Q ss_pred CCCHHHHHHHhcC----------CCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcc
Q 006570 440 GFSLEEIEEATNN----------FDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH 508 (640)
Q Consensus 440 ~~~~~~l~~~~~~----------~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 508 (640)
.++.++++.+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 4778888877764 556678999999999999965 79999999998766666788999999999999999
Q ss_pred cceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCC
Q 006570 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588 (640)
Q Consensus 509 iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk 588 (640)
|+++++++.. +...++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+|||||
T Consensus 104 iv~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlk 168 (321)
T 2c30_A 104 VVEMYKSYLV--------GEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIK 168 (321)
T ss_dssp BCCEEEEEEE--------TTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred cceEEEEEEE--------CCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCC
Confidence 9999999862 3468999999999999999853 458999999999999999999999 699999999
Q ss_pred CCceeecCCCceEEeCCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 589 TENILLDKALTAKLSGYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 589 ~~NILl~~~~~~kl~DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+||+++.++.+||+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 169 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~ 238 (321)
T 2c30_A 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238 (321)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred HHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999999999999998765432110 233 88999999999999999984
No 31
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.98 E-value=1.1e-31 Score=291.65 Aligned_cols=267 Identities=18% Similarity=0.155 Sum_probs=185.9
Q ss_pred CCCCCCCCCCcccEEeCC----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChh-hhhhcCCCC
Q 006570 57 TNFCYLPSSSSLKIVCTN----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRF-FTILTKLSN 125 (640)
Q Consensus 57 ~~~C~~~~~~~~gv~C~~----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~-~~~l~~l~~ 125 (640)
...|.|.+ ..|.|+. .+++.|+|++|.+++.. +..+...+.|++|+|++|.+.+.+ +..|.++++
T Consensus 5 ~~~c~~~~---~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~-~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~ 80 (455)
T 3v47_A 5 TSECSVIG---YNAICINRGLHQVPELPAHVNYVDLSLNSIAELN-ETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSS 80 (455)
T ss_dssp --CCEEET---TEEECCSSCCSSCCCCCTTCCEEECCSSCCCEEC-TTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTT
T ss_pred cceeEEEc---cccCcCCCCcccCCCCCCccCEEEecCCccCcCC-hhHhccCccccEEECcCCcccceECccccccccc
Confidence 34565542 2488864 35899999999885432 223445688999999999887555 567899999
Q ss_pred CcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCcc--ccCCCCCCEEEccCccCCccCCC--ccCcCcCCeeE
Q 006570 126 LKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPME--ITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELN 201 (640)
Q Consensus 126 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~ 201 (640)
|++|+|++|.+++..|..|+++++|++|+|++|.+++.+|.. |.++++|++|+|++|++++..|. +.++++|++|+
T Consensus 81 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~ 160 (455)
T 3v47_A 81 LIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLD 160 (455)
T ss_dssp CCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEE
T ss_pred CCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEe
Confidence 999999999998888888999999999999999998766655 88899999999999999988775 78889999999
Q ss_pred ccCCCCCCCCCCcc-------------------------------------cccceeecccCcc----------------
Q 006570 202 LGGNDFGPKFPSLS-------------------------------------KNIVSVILRNNSL---------------- 228 (640)
Q Consensus 202 L~~N~l~~~~~~~~-------------------------------------~~L~~L~l~~N~l---------------- 228 (640)
|++|++++..|..+ ++|+.|++++|++
T Consensus 161 L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~ 240 (455)
T 3v47_A 161 LTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTK 240 (455)
T ss_dssp CTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCC
T ss_pred CCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccc
Confidence 99998877655321 2455555555544
Q ss_pred -----------------------------------------------cccCCccccCCCCccEEEccCCcccCcCCcccc
Q 006570 229 -----------------------------------------------RSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261 (640)
Q Consensus 229 -----------------------------------------------~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 261 (640)
++.+|..|.++++|++|+|++|++++..|..|.
T Consensus 241 L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 320 (455)
T 3v47_A 241 IQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFW 320 (455)
T ss_dssp EEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred eeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhc
Confidence 444455555566666666666666655555566
Q ss_pred CCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 262 ~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
++++|++|+|++|++++..|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++.
T Consensus 321 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 321 GLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp TCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccC
Confidence 666666666666666555555555666666666666666655565666666666666666666553
No 32
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.97 E-value=1e-32 Score=296.29 Aligned_cols=185 Identities=14% Similarity=0.176 Sum_probs=156.4
Q ss_pred HHHHHHHhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEe
Q 006570 443 LEEIEEATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518 (640)
Q Consensus 443 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 518 (640)
+.++....++|+..+.||+|+||+||+|+.. +++.||||+++.. .....+.+.+|++++..++||||+++++++.
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~- 144 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ- 144 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE-
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-
Confidence 4455566788999999999999999999965 5789999999752 2223345889999999999999999999885
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
+....|+|||||++|+|.++++. ....+++..+..++.|++.||+|||+ .+||||||||+|||++.++
T Consensus 145 -------~~~~~~lV~Ey~~gg~L~~~l~~--~~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g 212 (437)
T 4aw2_A 145 -------DDNNLYLVMDYYVGGDLLTLLSK--FEDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNG 212 (437)
T ss_dssp -------CSSEEEEEECCCTTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTS
T ss_pred -------eCCEEEEEEecCCCCcHHHHHHH--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCC
Confidence 45678999999999999999974 24569999999999999999999999 7999999999999999999
Q ss_pred ceEEeCCCCCccccCCCC---------c--------c-----C-C-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNT---------L--------S-----F-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~---------~--------~-----~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++....... . . . . +.++|||||||++|||++|.
T Consensus 213 ~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~ 278 (437)
T 4aw2_A 213 HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278 (437)
T ss_dssp CEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSS
T ss_pred CEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCC
Confidence 999999999975432211 0 1 2 2 88999999999999999985
No 33
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.97 E-value=9.1e-32 Score=276.44 Aligned_cols=191 Identities=34% Similarity=0.533 Sum_probs=164.2
Q ss_pred CCCCCHHHHHHHhcCCCCC------CccccCCccceEEEEeCCCcEEEEEEeeccc----CCChHHHHHHHHHHhcCCCc
Q 006570 438 FRGFSLEEIEEATNNFDPT------NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKLRHR 507 (640)
Q Consensus 438 ~~~~~~~~l~~~~~~~~~~------~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~ 507 (640)
...|+++++..++++|... +.||+|+||.||+|+. +++.||||++.... ....+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4568999999999999887 8999999999999997 58899999987532 22356799999999999999
Q ss_pred ccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCC
Q 006570 508 HLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNL 587 (640)
Q Consensus 508 niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl 587 (640)
||+++++++. .....++||||+++|+|.+++........+++..++.++.|++.||+|||+ .+|+||||
T Consensus 91 ~i~~~~~~~~--------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl 159 (307)
T 2nru_A 91 NLVELLGFSS--------DGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDI 159 (307)
T ss_dssp TBCCEEEEEC--------SSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCC
T ss_pred CeEEEEEEEe--------cCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCC
Confidence 9999999884 344589999999999999999754445679999999999999999999999 79999999
Q ss_pred CCCceeecCCCceEEeCCCCCccccCCCC----------c--------cCC-CCccceehhhHHHHHHhhcC
Q 006570 588 KTENILLDKALTAKLSGYNIPLPSKVRNT----------L--------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 588 k~~NILl~~~~~~kl~DfGla~~~~~~~~----------~--------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+||++++++.+||+|||+++....... . ... +.++||||||+++|||++|.
T Consensus 160 kp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~ 231 (307)
T 2nru_A 160 KSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGL 231 (307)
T ss_dssp CGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCC
T ss_pred CHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCC
Confidence 99999999999999999999876533211 0 233 88999999999999999984
No 34
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.97 E-value=1.8e-32 Score=284.23 Aligned_cols=177 Identities=22% Similarity=0.333 Sum_probs=152.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+++++.++||||+++++++. .
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~--------~ 85 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE--------T 85 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------C
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--------E
Confidence 46788899999999999999995 6799999999975432 23467889999999999999999999985 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG 159 (328)
T 3fe3_A 86 EKTLYLIMEYASGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFG 159 (328)
T ss_dssp SSEEEEEECCCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTT
T ss_pred CCEEEEEEECCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeecc
Confidence 4568999999999999999975 3458999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc----------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++||||+||++|||+||.
T Consensus 160 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 211 (328)
T 3fe3_A 160 FSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 211 (328)
T ss_dssp CCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSS
T ss_pred CceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCC
Confidence 99765432111 223 57899999999999999984
No 35
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.97 E-value=3.5e-32 Score=283.00 Aligned_cols=176 Identities=16% Similarity=0.220 Sum_probs=151.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|+. .+|+.||+|+++.. .....+.+.+|+++++.++||||+++++++. .
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~--------~ 76 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ--------T 76 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE--------C
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEE--------e
Confidence 5688889999999999999995 46899999999753 2345678899999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 77 ~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG 150 (337)
T 1o6l_A 77 HDRLCFVMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFG 150 (337)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeecc
Confidence 4578999999999999999975 3468999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 151 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 202 (337)
T 1o6l_A 151 LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202 (337)
T ss_dssp TCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSS
T ss_pred chhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCC
Confidence 99763221110 233 88999999999999999984
No 36
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.97 E-value=3.6e-32 Score=279.98 Aligned_cols=177 Identities=16% Similarity=0.326 Sum_probs=152.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
++|...+.||+|+||+||+|+. .+++.||+|++........+.+.+|++++++++||||+++++++. .+..
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~~~~ 81 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY--------KDKR 81 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE--------ETTE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEe--------cCCe
Confidence 4677889999999999999995 468999999986554455678999999999999999999999986 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.++++. ....+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 156 (310)
T 3s95_A 82 LNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLAR 156 (310)
T ss_dssp EEEEEECCTTCBHHHHHHH--CCTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCE
T ss_pred eEEEEEecCCCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccce
Confidence 8999999999999999975 24568999999999999999999999 699999999999999999999999999997
Q ss_pred cccCCC----------------------C--c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRN----------------------T--L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~----------------------~--~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
...... + + +.. +.++|||||||++|||++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 219 (310)
T 3s95_A 157 LMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219 (310)
T ss_dssp ECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred ecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCC
Confidence 642211 0 0 333 88999999999999999884
No 37
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=4e-32 Score=283.52 Aligned_cols=178 Identities=21% Similarity=0.329 Sum_probs=150.1
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
..++|+..+.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++. .
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~--------~ 79 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLE--------T 79 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEE--------C
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEE--------e
Confidence 356788999999999999999994 5799999999975432 23467899999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 80 ~~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG 153 (347)
T 3zgw_A 80 ANKIFMVLEYCPGGELFDYIIS---QDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFG 153 (347)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEecc
Confidence 4568999999999999999965 3458999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCC---------c---------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT---------L---------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~---------~---------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ . +. . +.++||||+||++|||++|.
T Consensus 154 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~ 207 (347)
T 3zgw_A 154 LCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGF 207 (347)
T ss_dssp TCBC--------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSS
T ss_pred CcccccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCC
Confidence 9876532211 0 22 2 78899999999999999984
No 38
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.97 E-value=6.7e-32 Score=278.75 Aligned_cols=176 Identities=19% Similarity=0.256 Sum_probs=152.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|+. .+|+.||+|+++.. .....+.+.+|+.+++.++||||+++++++. +
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~--------~ 77 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ--------D 77 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE--------C
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEE--------e
Confidence 5688889999999999999995 46899999999753 2344577889999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 78 ~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg 151 (318)
T 1fot_A 78 AQQIFMIMDYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFG 151 (318)
T ss_dssp SSEEEEEECCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCS
T ss_pred CCEEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecC
Confidence 4578999999999999999975 3468999999999999999999998 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 152 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 200 (318)
T 1fot_A 152 FAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY 200 (318)
T ss_dssp SCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred cceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCC
Confidence 99765432211 233 88999999999999999984
No 39
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.97 E-value=1.6e-32 Score=282.43 Aligned_cols=184 Identities=23% Similarity=0.377 Sum_probs=148.2
Q ss_pred HHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 445 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
++.....+|++.+.||+|+||+||+|+. +|+.||||++...... ..+++.+|++++++++||||+++++++.
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----- 104 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT----- 104 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----
Confidence 3344456788899999999999999987 5889999999754322 2357889999999999999999999884
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCC--eeccCCCCCceeecCCCce
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG--IFGNNLKTENILLDKALTA 600 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NILl~~~~~~ 600 (640)
.....++||||+++|+|.+++........+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+
T Consensus 105 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~ 178 (309)
T 3p86_A 105 ---QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTV 178 (309)
T ss_dssp ---STTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCE
T ss_pred ---ECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcE
Confidence 344589999999999999999753222348999999999999999999998 57 9999999999999999999
Q ss_pred EEeCCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 179 kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~ 236 (309)
T 3p86_A 179 KVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236 (309)
T ss_dssp EECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCC
T ss_pred EECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999754322110 333 88999999999999999984
No 40
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.97 E-value=6.5e-32 Score=280.37 Aligned_cols=188 Identities=18% Similarity=0.345 Sum_probs=153.8
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccC-----
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD----- 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----- 522 (640)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++......
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 456888999999999999999964 789999999975432 3457899999999999999999999998643210
Q ss_pred --------------------------------------------CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHH
Q 006570 523 --------------------------------------------HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWP 558 (640)
Q Consensus 523 --------------------------------------------~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~ 558 (640)
........++||||+++|+|.+++.........++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 001223489999999999999999865444556778
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCC--------------------Cc-
Q 006570 559 QRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRN--------------------TL- 617 (640)
Q Consensus 559 ~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~--------------------~~- 617 (640)
.++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...... +.
T Consensus 165 ~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 899999999999999998 699999999999999999999999999998654321 00
Q ss_pred --------cCC-CCccceehhhHHHHHHhhcC
Q 006570 618 --------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 618 --------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.. +.++|||||||++|||++|.
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~ 273 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSF 273 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCC
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcC
Confidence 334 89999999999999999873
No 41
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.97 E-value=3.7e-32 Score=284.70 Aligned_cols=178 Identities=20% Similarity=0.282 Sum_probs=150.7
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 523 (640)
..++|+..+.||+|+||.||+|+. .+++.||||+++.. .....+.+.+|.++++.+ +||||+++++++.
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~------ 94 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ------ 94 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEE------
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEE------
Confidence 346899999999999999999995 46899999999753 234456788999999988 7999999999885
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
.....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 95 --~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~ 166 (353)
T 3txo_A 95 --TPDRLFFVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLA 166 (353)
T ss_dssp --CSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEEC
T ss_pred --eCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEc
Confidence 45578999999999999999975 3458999999999999999999999 699999999999999999999999
Q ss_pred CCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++........ +.. +.++|||||||++|||++|.
T Consensus 167 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~ 221 (353)
T 3txo_A 167 DFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221 (353)
T ss_dssp CCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSS
T ss_pred cccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCC
Confidence 99999864221110 223 88999999999999999984
No 42
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.97 E-value=2.2e-32 Score=291.56 Aligned_cols=182 Identities=13% Similarity=0.184 Sum_probs=154.0
Q ss_pred HHHHHHhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEec
Q 006570 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILT 519 (640)
Q Consensus 444 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 519 (640)
.++....++|+..+.||+|+||+||+|+.. +++.||+|+++.. .....+.+.+|+++++.++||||+++++++.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-- 139 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-- 139 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE--
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--
Confidence 344455678999999999999999999954 5889999999752 2233456889999999999999999999885
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
+....|+|||||++|+|.++++. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.
T Consensus 140 ------~~~~~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ 206 (410)
T 3v8s_A 140 ------DDRYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGH 206 (410)
T ss_dssp ------CSSEEEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSC
T ss_pred ------ECCEEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCC
Confidence 45678999999999999999964 348999999999999999999999 79999999999999999999
Q ss_pred eEEeCCCCCccccCCCC---------c---------c----C-CCCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNT---------L---------S----F-HTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~---------~---------~----~-~~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++....... . . . .+.++|||||||++|||+||.
T Consensus 207 ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~ 270 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 270 (410)
T ss_dssp EEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSS
T ss_pred EEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCC
Confidence 99999999976543210 0 1 1 257999999999999999984
No 43
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.97 E-value=5.3e-32 Score=285.76 Aligned_cols=179 Identities=18% Similarity=0.375 Sum_probs=149.9
Q ss_pred hcCCCCCCccccCCccceEEEEe--------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEec
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL--------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 519 (640)
.++|++.+.||+|+||.||+|+. .++..||||+++.... ...+++.+|+++++++ +||||+++++++.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC--
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc--
Confidence 35788889999999999999984 2356799999975422 2346789999999999 8999999999884
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
.....|+||||+++|+|.++++.... ...+++.+++.++.|++.||+|||+ .+|+|||
T Consensus 158 ------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrD 228 (370)
T 2psq_A 158 ------QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRD 228 (370)
T ss_dssp ------SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred ------cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccc
Confidence 34558999999999999999976321 2458999999999999999999999 7999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|||+|||++.++.+||+|||+++....... + +.. +.++|||||||++|||+| |
T Consensus 229 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g 302 (370)
T 2psq_A 229 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 302 (370)
T ss_dssp CCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred cchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999985532211 1 333 889999999999999998 5
No 44
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.97 E-value=5.4e-32 Score=285.38 Aligned_cols=177 Identities=15% Similarity=0.207 Sum_probs=148.7
Q ss_pred hcCCCCCCccccCCccceEEEE------eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC---CcccceeeeEEEecc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF------LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR---HRHLVSILGHCILTY 520 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~ 520 (640)
.++|.+.+.||+|+||+||+|+ ..+++.||||+++.. ...++.+|++++++++ |+||+++++++.
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~--- 137 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL--- 137 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE---
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeee---
Confidence 4678888999999999999994 446889999999743 4577888888888887 999999999986
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccC--CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC--
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWK--KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-- 596 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-- 596 (640)
.....++|||||++|+|.++++..+ ....+++..++.|+.|++.||+|||+ .+||||||||+|||++.
T Consensus 138 -----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~ 209 (365)
T 3e7e_A 138 -----FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGF 209 (365)
T ss_dssp -----CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGG
T ss_pred -----cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccc
Confidence 3455899999999999999997432 34569999999999999999999999 79999999999999998
Q ss_pred ---------CCceEEeCCCCCccccCCC----------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 597 ---------ALTAKLSGYNIPLPSKVRN----------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 597 ---------~~~~kl~DfGla~~~~~~~----------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++.+||+|||+++...... +. +.. +.++|||||||++|||+||.
T Consensus 210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~ 282 (365)
T 3e7e_A 210 LEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGT 282 (365)
T ss_dssp TCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSS
T ss_pred cCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCC
Confidence 8999999999996542110 10 334 89999999999999999995
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=7.2e-31 Score=285.07 Aligned_cols=255 Identities=16% Similarity=0.100 Sum_probs=203.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCcc--ccCCCCCCE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSK--INRFWSLEV 152 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~ 152 (640)
.+++.|+|++|.+.+.+++..+...++|++|+|++|.+.+..|..|+++++|++|+|++|.+++.+|.. |..+++|++
T Consensus 54 ~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~ 133 (455)
T 3v47_A 54 QDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEM 133 (455)
T ss_dssp TTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCE
T ss_pred ccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCE
Confidence 467778888777755554444445577788888888777777777788888888888888877655544 777788888
Q ss_pred EEcccCcccccCCcc-ccCCCCCCEEEccCccCCccCCC-ccCc----------------------------------Cc
Q 006570 153 LNISSNFIYGEIPME-ITSLKNLKSIVLADNLLNGSVPD-LQRL----------------------------------VL 196 (640)
Q Consensus 153 L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~-~~~l----------------------------------~~ 196 (640)
|+|++|.+++..|.. +.++++|++|+|++|++++..+. +..+ ++
T Consensus 134 L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~ 213 (455)
T 3v47_A 134 LVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTS 213 (455)
T ss_dssp EECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCE
T ss_pred EECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccce
Confidence 888888887666665 67777888888888777776553 3222 34
Q ss_pred ---------------------------------------------------------------CCeeEccCCCCCCCCCC
Q 006570 197 ---------------------------------------------------------------LEELNLGGNDFGPKFPS 213 (640)
Q Consensus 197 ---------------------------------------------------------------L~~L~L~~N~l~~~~~~ 213 (640)
|++|+|++|++++..|.
T Consensus 214 L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 293 (455)
T 3v47_A 214 ITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKS 293 (455)
T ss_dssp EEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTT
T ss_pred eeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchh
Confidence 44444444455444454
Q ss_pred c---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCC
Q 006570 214 L---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKL 290 (640)
Q Consensus 214 ~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L 290 (640)
. +++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..+..+++|
T Consensus 294 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 373 (455)
T 3v47_A 294 VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNL 373 (455)
T ss_dssp TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred hcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccc
Confidence 3 5789999999999999999999999999999999999998889999999999999999999999889999999999
Q ss_pred CEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 291 NFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 291 ~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
++|++++|++++..+..+..+++|+.+++++|++++..|
T Consensus 374 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 374 KELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999999998777788999999999999999998765
No 46
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.97 E-value=4.7e-32 Score=286.41 Aligned_cols=177 Identities=19% Similarity=0.359 Sum_probs=144.2
Q ss_pred hcCCCCCCccccCCccceEEEEeC----CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
..+|++.+.||+|+||.||+|+.. ++..||||+++... ....+++.+|++++++++||||+++++++.
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~------- 116 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT------- 116 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-------
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-------
Confidence 357899999999999999999854 46789999997542 223467999999999999999999999984
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....++||||+++|+|.++++. ....+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 117 -~~~~~~lv~e~~~~~sL~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~D 190 (373)
T 2qol_A 117 -KSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSD 190 (373)
T ss_dssp -SSSSCEEEEECCTTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECC
T ss_pred -eCCceEEEEeCCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECc
Confidence 34568999999999999999974 34568999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 605 YNIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 605 fGla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||+++....... + +.. +.++|||||||++|||++ |
T Consensus 191 fg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g 247 (373)
T 2qol_A 191 FGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247 (373)
T ss_dssp C----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred CccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCC
Confidence 999986543211 1 234 889999999999999987 6
No 47
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.97 E-value=1.3e-31 Score=273.81 Aligned_cols=177 Identities=18% Similarity=0.287 Sum_probs=150.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCC---hHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHL---PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|++.+.||+|+||.||+|+. .+++.||+|++....... .+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-------- 81 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE-------- 81 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE--------
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee--------
Confidence 35688899999999999999994 468999999986543322 367899999999999999999999874
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+...++||||+++|+|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 82 ~~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Df 155 (294)
T 4eqm_A 82 EDDCYYLVMEYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDF 155 (294)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eCCeEEEEEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeC
Confidence 45668999999999999999975 3468999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCC---------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT---------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~---------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||++|||+||.
T Consensus 156 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~ 209 (294)
T 4eqm_A 156 GIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209 (294)
T ss_dssp SSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred CCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence 99976532210 0 333 88999999999999999984
No 48
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.97 E-value=3.4e-32 Score=290.23 Aligned_cols=185 Identities=15% Similarity=0.206 Sum_probs=156.2
Q ss_pred HHHHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEe
Q 006570 443 LEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCIL 518 (640)
Q Consensus 443 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 518 (640)
+++.....++|+..+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|++++..++||||+++++++.
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~- 131 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ- 131 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE-
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe-
Confidence 445555678899999999999999999996 468999999997532 223355889999999999999999999885
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
+....|+||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++
T Consensus 132 -------~~~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g 199 (412)
T 2vd5_A 132 -------DENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCG 199 (412)
T ss_dssp -------CSSEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTS
T ss_pred -------eCCEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCC
Confidence 456789999999999999999752 3468999999999999999999999 7999999999999999999
Q ss_pred ceEEeCCCCCccccCCCC---------c--------c--------CC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNT---------L--------S--------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~---------~--------~--------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++....... . . .. +.++|||||||++|||++|.
T Consensus 200 ~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~ 267 (412)
T 2vd5_A 200 HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267 (412)
T ss_dssp CEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSS
T ss_pred CEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCC
Confidence 999999999976533211 0 1 23 88999999999999999984
No 49
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.97 E-value=2.6e-32 Score=278.87 Aligned_cols=179 Identities=20% Similarity=0.316 Sum_probs=149.7
Q ss_pred cCCCCCCccccCCccceEEEEe-----CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 84 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG----- 84 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH-----
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----
Confidence 5678889999999999999984 358899999998654444578999999999999999999999986322
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 85 -~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Df 158 (295)
T 3ugc_A 85 -RRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDF 158 (295)
T ss_dssp -HTSCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCC
T ss_pred -CCceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccC
Confidence 23479999999999999999752 3458999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... + +.. +.++||||||+++|||+||+
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~ 214 (295)
T 3ugc_A 159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214 (295)
T ss_dssp CSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcc
Confidence 99986533211 0 233 88999999999999999973
No 50
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.97 E-value=1.1e-31 Score=280.19 Aligned_cols=179 Identities=20% Similarity=0.288 Sum_probs=151.9
Q ss_pred HHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 522 (640)
...++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+..|.+++..+ +||||+++++++.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~----- 88 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ----- 88 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE-----
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE-----
Confidence 3457899999999999999999995 468999999997542 34456788899999877 9999999999885
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
+....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||
T Consensus 89 ---~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL 159 (345)
T 1xjd_A 89 ---TKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKI 159 (345)
T ss_dssp ---CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEE
T ss_pred ---eCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEE
Confidence 45578999999999999999975 3458999999999999999999999 69999999999999999999999
Q ss_pred eCCCCCccccCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++...... +. +.. +.++|||||||++|||++|.
T Consensus 160 ~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 215 (345)
T 1xjd_A 160 ADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215 (345)
T ss_dssp CCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred eEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCC
Confidence 9999997642111 00 333 88999999999999999984
No 51
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.97 E-value=2e-31 Score=279.89 Aligned_cols=177 Identities=22% Similarity=0.294 Sum_probs=152.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC------ChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.+.|++.+.||+|+||.||+|+. .+|+.||+|+++..... ..+.+.+|++++++++||||+++++++.
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----- 85 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE----- 85 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE-----
Confidence 45788899999999999999995 46899999999764321 3578999999999999999999999885
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC----
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL---- 598 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~---- 598 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++
T Consensus 86 ---~~~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 86 ---NRTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp ---CSSEEEEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSC
T ss_pred ---eCCEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCcc
Confidence 44678999999999999999964 4569999999999999999999999 6999999999999998876
Q ss_pred ceEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++........ ... +.++|||||||++|||++|.
T Consensus 157 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~ 215 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 215 (361)
T ss_dssp CEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred CEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCC
Confidence 7999999999765432111 233 88999999999999999984
No 52
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.4e-31 Score=276.76 Aligned_cols=181 Identities=19% Similarity=0.258 Sum_probs=153.5
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|.+.+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~ 82 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET------TTR 82 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT------TTC
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecC------CCc
Confidence 46888899999999999999954 58999999997543 34467888999999999999999999988631 234
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee----cCCCceEEeC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL----DKALTAKLSG 604 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----~~~~~~kl~D 604 (640)
..++||||+++|+|.+++........+++.+++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (319)
T 4euu_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (319)
T ss_dssp CEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECC
T ss_pred eEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEcc
Confidence 689999999999999999865445559999999999999999999999 699999999999999 7888999999
Q ss_pred CCCCccccCCCCc------------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL------------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~------------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ ... +.++|||||||++|||+||.
T Consensus 160 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~ 220 (319)
T 4euu_A 160 FGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220 (319)
T ss_dssp CTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred CCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999765432211 123 78999999999999999984
No 53
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.97 E-value=1.3e-31 Score=282.97 Aligned_cols=176 Identities=17% Similarity=0.254 Sum_probs=151.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|+++++.++||||+++++++. .
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~--------~ 86 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ--------D 86 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------C
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE--------e
Confidence 5688899999999999999995 45889999999753 2345578899999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 87 ~~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG 160 (384)
T 4fr4_A 87 EEDMFMVVDLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFN 160 (384)
T ss_dssp SSEEEEEECCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccc
Confidence 4568999999999999999964 4568999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 161 ~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~ 214 (384)
T 4fr4_A 161 IAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214 (384)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred eeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCC
Confidence 99865322110 112 77999999999999999984
No 54
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.97 E-value=9.2e-32 Score=285.20 Aligned_cols=177 Identities=18% Similarity=0.212 Sum_probs=149.6
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc---CCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|+..+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|..++.++ +||||+++++++.
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~------- 123 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ------- 123 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE-------
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE-------
Confidence 457888999999999999999954 58899999998643 22335688999999887 8999999999875
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 124 -~~~~~~lV~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~D 196 (396)
T 4dc2_A 124 -TESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTD 196 (396)
T ss_dssp -CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECC
T ss_pred -ECCEEEEEEEcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEee
Confidence 45678999999999999999975 3468999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ +.. +.++|||||||++|||++|.
T Consensus 197 FGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~ 250 (396)
T 4dc2_A 197 YGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250 (396)
T ss_dssp CTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred cceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence 9999863211110 333 88999999999999999984
No 55
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.97 E-value=1.5e-31 Score=279.85 Aligned_cols=176 Identities=17% Similarity=0.242 Sum_probs=152.8
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|+. .+|+.||||+++.. .....+.+.+|+++++.++||||+++++++. .
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~ 112 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK--------D 112 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE--------C
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------c
Confidence 5688899999999999999995 46899999999753 2345578899999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 113 ~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg 186 (350)
T 1rdq_E 113 NSNLYMVMEYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFG 186 (350)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccc
Confidence 4678999999999999999975 3458999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 187 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 235 (350)
T 1rdq_E 187 FAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235 (350)
T ss_dssp TCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred cceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCC
Confidence 99865433211 333 88999999999999999984
No 56
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.97 E-value=1.8e-31 Score=274.98 Aligned_cols=177 Identities=21% Similarity=0.353 Sum_probs=149.7
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||+||+|+..+|+.||+|++..... ...+.+.+|++++++++||||+++++++. .+
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~~ 91 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH--------SE 91 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC--------CS
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc--------cC
Confidence 467888999999999999999988899999999975432 23467899999999999999999999884 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 165 (311)
T 3niz_A 92 RCLTLVFEFMEK-DLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGL 165 (311)
T ss_dssp SCEEEEEECCSE-EHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEcCCCC-CHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcC
Confidence 568999999985 89888864 34568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc-----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ + .. +.++||||+||++|||++|.
T Consensus 166 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~ 217 (311)
T 3niz_A 166 ARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217 (311)
T ss_dssp CEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred ceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCC
Confidence 9765322110 2 33 88999999999999999984
No 57
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.97 E-value=8.1e-32 Score=279.30 Aligned_cols=177 Identities=19% Similarity=0.358 Sum_probs=149.2
Q ss_pred hcCCCCCCccccCCccceEEEEeC----CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|.+.+.||+|+||.||+|+.. .+..||||+++... ....+.+.+|++++++++||||+++++++.
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------- 120 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT------- 120 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-------
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-------
Confidence 356788899999999999999963 34569999997542 223467999999999999999999999984
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.+...++||||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 121 -~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~D 194 (325)
T 3kul_A 121 -RGRLAMIVTEYMENGSLDTFLRT--HDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSD 194 (325)
T ss_dssp -GGGCCEEEEECCTTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred -eCCccEEEeeCCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECC
Confidence 34557999999999999999964 34568999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 605 YNIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 605 fGla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||+++....... + +.. +.++|||||||++|||++ |
T Consensus 195 fg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g 251 (325)
T 3kul_A 195 FGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG 251 (325)
T ss_dssp CSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred CCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 999986543211 1 233 889999999999999998 6
No 58
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.97 E-value=5.9e-32 Score=280.00 Aligned_cols=181 Identities=20% Similarity=0.369 Sum_probs=148.2
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|+..+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++||||+++++++..... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----~~~~ 96 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS----VDVD 96 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS----SSEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCC----CCce
Confidence 457888999999999999999975 7899999997543 223456678899999999999999999864221 2345
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC-------CCCeeccCCCCCceeecCCCceEE
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV-------APGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
.++||||+++|+|.++++. ..+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 7999999999999999974 34899999999999999999999820 119999999999999999999999
Q ss_pred eCCCCCccccCCCC----------c---------c-----CC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNT----------L---------S-----FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~----------~---------~-----~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++....... . + .. +.++|||||||++|||+||+
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~ 235 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRC 235 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCC
Confidence 99999965432111 0 1 12 66889999999999999983
No 59
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.97 E-value=1.2e-31 Score=274.56 Aligned_cols=175 Identities=21% Similarity=0.378 Sum_probs=146.1
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhc--CCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSK--LRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||+||+|+. +++.||||++... ..+.+.+|.+++.. ++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~----~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRH----SS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET----TE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC----CC
Confidence 46788899999999999999998 6899999998743 34566677777666 799999999999874332 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcc--------cCCCCCeeccCCCCCceeecCCCc
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH--------TGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
...++||||+++|+|.++++ ...+++..++.++.|++.||+||| + .+|+||||||+|||++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCC
Confidence 56899999999999999995 346899999999999999999999 6 79999999999999999999
Q ss_pred eEEeCCCCCccccCCCC------------c---------cC------C-CCccceehhhHHHHHHhhc
Q 006570 600 AKLSGYNIPLPSKVRNT------------L---------SF------H-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~------------~---------~~------~-~~~~DvwS~Gvvl~elltG 639 (640)
+||+|||+++....... . +. . +.++|||||||++|||+||
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg 219 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence 99999999965422110 0 11 2 4689999999999999998
No 60
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.97 E-value=1.8e-31 Score=289.21 Aligned_cols=177 Identities=21% Similarity=0.390 Sum_probs=150.9
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|+..+.||+|+||.||+|+.. ++.||||+++... ..+.|.+|+++|++++||||+++++++.. ....
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------~~~~ 261 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE-------EKGG 261 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEEC-------TTSC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEc-------CCCc
Confidence 456788899999999999999985 7899999997543 45789999999999999999999999862 2335
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++|||||++|+|.++++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++
T Consensus 262 ~~iv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 337 (450)
T 1k9a_A 262 LYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTK 337 (450)
T ss_dssp EEEEEECCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred eEEEEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcc
Confidence 89999999999999999863 23457899999999999999999999 699999999999999999999999999997
Q ss_pred cccCCCCc--------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 610 PSKVRNTL--------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 610 ~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
........ ... +.++|||||||++|||+| |.
T Consensus 338 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~ 384 (450)
T 1k9a_A 338 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 384 (450)
T ss_dssp ECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred cccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 54322111 334 889999999999999998 63
No 61
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.97 E-value=3.2e-31 Score=274.93 Aligned_cols=176 Identities=20% Similarity=0.308 Sum_probs=151.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC------CChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR------HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
+.|+..+.||+|+||.||+|+. .+|+.||+|+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~------ 84 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE------ 84 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE------
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE------
Confidence 4588889999999999999995 4689999999975432 13578999999999999999999999885
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC----c
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL----T 599 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~----~ 599 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .
T Consensus 85 --~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~ 156 (326)
T 2y0a_A 85 --NKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPR 156 (326)
T ss_dssp --CSSEEEEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCC
T ss_pred --eCCEEEEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCC
Confidence 34568999999999999999964 4568999999999999999999998 7999999999999999887 8
Q ss_pred eEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++........ ... +.++|||||||++|||++|.
T Consensus 157 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~ 214 (326)
T 2y0a_A 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214 (326)
T ss_dssp EEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred EEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCc
Confidence 999999999765422110 233 88999999999999999984
No 62
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.6e-31 Score=276.41 Aligned_cols=177 Identities=15% Similarity=0.205 Sum_probs=151.6
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|++.+.||+|+||.||+|+. .+++.||+|.++... ...+.+.+|+++++.++||||+++++++. ...
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~--------~~~ 74 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFE--------SME 74 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEE--------ETT
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEe--------cCC
Confidence 46788899999999999999995 468899999987432 23467889999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC--CCceEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK--ALTAKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~--~~~~kl~DfG 606 (640)
..++||||+++|+|.+++.. ....+++.++..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 75 ELVMIFEFISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEEEEECCCCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEEEEeCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 68999999999999999964 33468999999999999999999999 69999999999999987 7899999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 150 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~ 200 (321)
T 1tki_A 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI 200 (321)
T ss_dssp TCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSS
T ss_pred CCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99876432211 233 88999999999999999984
No 63
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.97 E-value=1.4e-31 Score=279.58 Aligned_cols=176 Identities=19% Similarity=0.213 Sum_probs=149.7
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC---ChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---LPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|+. .+++.||+|+++..... ..+.+.+|++++.++ +||||+++++++.
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-------- 80 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-------- 80 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE--------
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEE--------
Confidence 5688889999999999999995 46889999999865322 235678899999988 8999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....|+||||+++|+|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 81 ~~~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DF 154 (345)
T 3a8x_A 81 TESRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDY 154 (345)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCG
T ss_pred eCCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEec
Confidence 44678999999999999999975 3458999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCC--------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT--------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~--------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||++|||++|.
T Consensus 155 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 207 (345)
T 3a8x_A 155 GMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207 (345)
T ss_dssp GGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred cccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCC
Confidence 99985321110 0 233 88999999999999999984
No 64
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.97 E-value=6e-32 Score=293.35 Aligned_cols=181 Identities=17% Similarity=0.312 Sum_probs=154.3
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++...++|+..+.||+|+||.||+|+..++..||||+++... ...++|.+|+++|++++||||+++++++.
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-------- 253 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-------- 253 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC--------
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe--------
Confidence 344556788899999999999999998888999999998543 35688999999999999999999999873
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
....++|||||++|+|.++++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 254 -~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DF 328 (454)
T 1qcf_A 254 -KEPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADF 328 (454)
T ss_dssp -SSSCEEEECCCTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECST
T ss_pred -CCccEEEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeC
Confidence 23479999999999999999742 12357899999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCC------C-----c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 606 NIPLPSKVRN------T-----L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 606 Gla~~~~~~~------~-----~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
|+++...... . . ... +.++|||||||++|||+| |.
T Consensus 329 G~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~ 383 (454)
T 1qcf_A 329 GLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383 (454)
T ss_dssp TGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCC
Confidence 9998653211 0 0 233 889999999999999998 63
No 65
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=1.5e-31 Score=269.52 Aligned_cols=175 Identities=18% Similarity=0.364 Sum_probs=151.7
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||.||+|+..+++.||+|++.... ...+++.+|++++++++||||+++++++. .....
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~~~ 80 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCL--------EQAPI 80 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEEC--------SSSSE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEe--------cCCce
Confidence 5677889999999999999998888999999998543 34578999999999999999999999884 34558
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 155 (269)
T 4hcu_A 81 CLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRF 155 (269)
T ss_dssp EEEEECCTTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGG
T ss_pred EEEEEeCCCCcHHHHHHh--cCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccc
Confidence 999999999999999974 34568999999999999999999999 7999999999999999999999999999975
Q ss_pred ccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 611 SKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 611 ~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
...... . ... +.++||||+|+++|||++ |
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g 204 (269)
T 4hcu_A 156 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 204 (269)
T ss_dssp BCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred ccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCC
Confidence 532110 1 234 889999999999999998 5
No 66
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.97 E-value=5.3e-31 Score=272.21 Aligned_cols=179 Identities=20% Similarity=0.344 Sum_probs=138.1
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+|+. .+|+.||+|+++... ....+.+.+|++++++++||||+++++++. .+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~~ 75 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIH--------TE 75 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEEC--------CT
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEE--------EC
Confidence 46788999999999999999984 468999999997543 234578899999999999999999999884 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccC---CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWK---KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
...++||||++ |+|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 76 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~D 151 (317)
T 2pmi_A 76 NKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGD 151 (317)
T ss_dssp TEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECC
T ss_pred CeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECc
Confidence 57899999998 59999986532 23458999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++....... + + .. +.++|||||||++|||+||.
T Consensus 152 fg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~ 206 (317)
T 2pmi_A 152 FGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206 (317)
T ss_dssp CSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 999976532110 0 2 23 88999999999999999984
No 67
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.97 E-value=2.1e-31 Score=278.77 Aligned_cols=178 Identities=17% Similarity=0.211 Sum_probs=151.7
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecc---cCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK---QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 523 (640)
..++|+..+.||+|+||.||+|+.. +++.||||+++.. .....+.+..|.+++..+ +||||+++++++.
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~------ 91 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ------ 91 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE------
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE------
Confidence 3467889999999999999999965 4789999999754 234557788999999988 8999999999874
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
.....|+||||+++|+|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 92 --~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~ 163 (353)
T 2i0e_A 92 --TMDRLYFVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIA 163 (353)
T ss_dssp --CSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEEC
T ss_pred --cCCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEE
Confidence 44678999999999999999975 3458999999999999999999999 699999999999999999999999
Q ss_pred CCCCCccccCCCC--------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNT--------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~--------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++....... . +.. +.++|||||||++|||++|.
T Consensus 164 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~ 218 (353)
T 2i0e_A 164 DFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218 (353)
T ss_dssp CCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSS
T ss_pred eCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCC
Confidence 9999986321110 0 233 88999999999999999984
No 68
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.97 E-value=1.7e-31 Score=277.20 Aligned_cols=177 Identities=19% Similarity=0.286 Sum_probs=142.7
Q ss_pred hcCCCCCCccccCCccceEEEEe----CCCcEEEEEEeeccc----CCChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
.++|+..+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++||||+++++++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---- 91 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ---- 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE----
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE----
Confidence 35688899999999999999985 468999999997542 223456889999999999999999999885
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
.....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|
T Consensus 92 ----~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~k 161 (327)
T 3a62_A 92 ----TGGKLYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVK 161 (327)
T ss_dssp ----CSSCEEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEE
T ss_pred ----cCCEEEEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEE
Confidence 34568999999999999999975 3458899999999999999999999 6999999999999999999999
Q ss_pred EeCCCCCccccCCC--------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRN--------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~--------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||+++...... +. +.. +.++|||||||++|||++|.
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 218 (327)
T 3a62_A 162 LTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218 (327)
T ss_dssp ECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCC
Confidence 99999987542211 00 233 88999999999999999984
No 69
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.97 E-value=1.3e-31 Score=277.59 Aligned_cols=177 Identities=23% Similarity=0.366 Sum_probs=148.7
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+++++.++||||+++++++. .+
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~--------~~ 77 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR--------EG 77 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEE--------CS
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEe--------cC
Confidence 367888999999999999999954 789999999975432 23467899999999999999999999885 45
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~ 151 (323)
T 3tki_A 78 NIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151 (323)
T ss_dssp SEEEEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEEcCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeec
Confidence 668999999999999999963 4568999999999999999999998 7999999999999999999999999999
Q ss_pred CccccCCC----------Cc---------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN----------TL---------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~----------~~---------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++...... +. +. . +.++|||||||++|||++|.
T Consensus 152 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~ 205 (323)
T 3tki_A 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205 (323)
T ss_dssp CEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred cceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCC
Confidence 97542111 00 22 2 67899999999999999984
No 70
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.97 E-value=3.2e-31 Score=280.88 Aligned_cols=178 Identities=16% Similarity=0.237 Sum_probs=152.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|++.+.||+|+||.||+|+. .+|+.||+|++..........+.+|++++++++||||+++++++. ...
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~--------~~~ 121 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE--------DKY 121 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE--------CSS
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEE--------eCC
Confidence 45788999999999999999995 468899999997654444567899999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC--CCceEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK--ALTAKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~--~~~~kl~DfG 606 (640)
..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||
T Consensus 122 ~~~lv~E~~~gg~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 122 EMVLILEFLSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp EEEEEEECCCCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEEEEcCCCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecc
Confidence 68999999999999999964 33468999999999999999999999 69999999999999974 4789999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||+||.
T Consensus 197 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 247 (387)
T 1kob_A 197 LATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 247 (387)
T ss_dssp TCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSC
T ss_pred cceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCC
Confidence 99876432211 233 88999999999999999984
No 71
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.97 E-value=1.3e-31 Score=275.89 Aligned_cols=181 Identities=17% Similarity=0.259 Sum_probs=149.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCC---hHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHL---PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|++.+.||+|+||.||+|+. .+++.||||+++...... .+.+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~---- 86 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP---- 86 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET----
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC----
Confidence 35788899999999999999994 678999999997643322 3578899999999999999999998864321
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+...++||||+++|+|.++++. ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 87 ~~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 87 AGPLPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp TEEEEEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCC
T ss_pred CCcccEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeec
Confidence 23346999999999999999975 3468999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCC-----------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-----------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-----------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||++|||+||.
T Consensus 161 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~ 216 (311)
T 3ork_A 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216 (311)
T ss_dssp SCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred cCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence 99976532210 0 334 88999999999999999984
No 72
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.97 E-value=1.8e-31 Score=292.45 Aligned_cols=178 Identities=17% Similarity=0.340 Sum_probs=152.8
Q ss_pred HhcCCCCCCccccCCccceEEEEeCC-CcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
...+|+..+.||+|+||.||+|++.. +..||||+++... ...++|.+|+++|++++||||++++++|. ..
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~--------~~ 288 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT--------RE 288 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC--------SS
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEe--------cC
Confidence 34567888999999999999999654 8899999997543 34688999999999999999999999985 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++|||||++|+|.++++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 289 ~~~~lv~E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~ 364 (495)
T 1opk_A 289 PPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGL 364 (495)
T ss_dssp SSCEEEEECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred CcEEEEEEccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeeccc
Confidence 5589999999999999999753 34568999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCCc------------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 608 PLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 608 a~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
++........ ... +.++|||||||++|||+| |
T Consensus 365 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g 416 (495)
T 1opk_A 365 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 416 (495)
T ss_dssp EECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred ceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCC
Confidence 9865322110 233 889999999999999998 5
No 73
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=5.2e-30 Score=277.18 Aligned_cols=225 Identities=18% Similarity=0.100 Sum_probs=206.3
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..++.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 68899999999999888899999999999999999998888889999999999999999999666668999999999999
Q ss_pred cCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCC----cccccceeecccCcccccCCccccCCCCccEEEccCCcccC
Q 006570 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (640)
Q Consensus 180 ~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 254 (640)
++|.|+..++. |.++++|++|+|++|+..+.++. .+++|+.|+|++|+++ .+| .+..+++|+.|+|++|+|++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCc
Confidence 99999998886 99999999999999655444443 2789999999999998 455 58899999999999999999
Q ss_pred cCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 255 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..+++|+.+++++|.+.-
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 999999999999999999999999999999999999999999999998888889999999999999998753
No 74
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.97 E-value=8.7e-32 Score=282.95 Aligned_cols=189 Identities=21% Similarity=0.339 Sum_probs=156.8
Q ss_pred CCHHHHHHHhcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCccccee
Q 006570 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSI 512 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l 512 (640)
++..+++...++|.+.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|++++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 45667777788999999999999999999973 3467899999975432 2235799999999999 79999999
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-----------------------------------------
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK----------------------------------------- 551 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----------------------------------------- 551 (640)
++++.. .+...++||||+++|+|.++++....
T Consensus 92 ~~~~~~-------~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (359)
T 3vhe_A 92 LGACTK-------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSAS 164 (359)
T ss_dssp EEEECS-------TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------
T ss_pred eeeeec-------CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccc
Confidence 999852 23457999999999999999975321
Q ss_pred ----------------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 552 ----------------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 552 ----------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 241 (359)
T 3vhe_A 165 SGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLAR 241 (359)
T ss_dssp -------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred cccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEecccee
Confidence 1228899999999999999999999 699999999999999999999999999998
Q ss_pred cccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 610 PSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 610 ~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
........ +.. +.++|||||||++|||+| |
T Consensus 242 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 292 (359)
T 3vhe_A 242 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 292 (359)
T ss_dssp CTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred eecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcC
Confidence 65322110 233 889999999999999998 6
No 75
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.97 E-value=4.7e-32 Score=287.00 Aligned_cols=177 Identities=18% Similarity=0.327 Sum_probs=149.7
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|...+.||+|+||.||+|+.. +++.||||.++.... ...+++.+|+++|++++||||+++++++. ..
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--------~~ 184 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT--------QK 184 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC--------SS
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe--------cC
Confidence 456788899999999999999965 689999999875322 22356889999999999999999999984 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.++++.. ...+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 185 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~ 259 (377)
T 3cbl_A 185 QPIYIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGM 259 (377)
T ss_dssp SSCEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred CCcEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCC
Confidence 5589999999999999999752 3458999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 608 PLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 608 a~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
++....... . ... +.++|||||||++|||+| |
T Consensus 260 s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g 312 (377)
T 3cbl_A 260 SREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLG 312 (377)
T ss_dssp CEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTS
T ss_pred ceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 975432110 0 233 889999999999999998 5
No 76
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.97 E-value=3.3e-31 Score=271.14 Aligned_cols=178 Identities=17% Similarity=0.268 Sum_probs=145.8
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--------------------------CChHHHHHHHHHHh
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--------------------------HLPQSLMQHVELLS 502 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 502 (640)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46788899999999999999984 5688999999975321 11356899999999
Q ss_pred cCCCcccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCe
Q 006570 503 KLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGI 582 (640)
Q Consensus 503 ~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 582 (640)
+++||||+++++++... .....++||||+++|+|.+++. ...+++.++..++.|++.||+|||+ .+|
T Consensus 92 ~l~h~~iv~~~~~~~~~------~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i 158 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDP------NEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHY---QKI 158 (298)
T ss_dssp TCCCTTBCCEEEEEECS------SSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hCCCCCCCeEEEEEEcC------CCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCe
Confidence 99999999999998621 2456899999999999988763 3468999999999999999999999 699
Q ss_pred eccCCCCCceeecCCCceEEeCCCCCccccCCCC--------c---------c-C--C-CCccceehhhHHHHHHhhcC
Q 006570 583 FGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT--------L---------S-F--H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 583 iHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~--------~---------~-~--~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||||||+||+++.++.+||+|||+++....... . + . . +.++|||||||++|||++|.
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~ 237 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSS
T ss_pred eccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCC
Confidence 9999999999999999999999999976543211 0 1 1 1 56789999999999999984
No 77
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.97 E-value=5.3e-31 Score=277.16 Aligned_cols=178 Identities=19% Similarity=0.308 Sum_probs=151.4
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|+..+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++.
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-------- 98 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-------- 98 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------
Confidence 346789999999999999999995 4689999999975432 22367889999999999999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC---CceEE
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---LTAKL 602 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl 602 (640)
.....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.+ +.+||
T Consensus 99 ~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl 172 (362)
T 2bdw_A 99 EESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKL 172 (362)
T ss_dssp CSSEEEEEECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEE
T ss_pred eCCEEEEEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEE
Confidence 44568999999999999999964 4568999999999999999999999 699999999999999865 45999
Q ss_pred eCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 173 ~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~ 227 (362)
T 2bdw_A 173 ADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 227 (362)
T ss_dssp CCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCC
Confidence 999999766432211 223 88999999999999999984
No 78
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.9e-31 Score=275.87 Aligned_cols=176 Identities=19% Similarity=0.319 Sum_probs=150.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|.+.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+++++.++||||+++++++.
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-------- 79 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT-------- 79 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEE--------
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------
Confidence 35788899999999999999995 67899999999743 2334568999999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+ +|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+||
T Consensus 80 ~~~~~~lv~E~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DF 152 (336)
T 3h4j_B 80 TPTDIVMVIEYA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADF 152 (336)
T ss_dssp CSSEEEEEECCC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCS
T ss_pred eCCEEEEEEECC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEe
Confidence 345689999999 6899999865 3468999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCCc----------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL----------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
|++......... +.. +.++|||||||++|||++|.
T Consensus 153 G~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~ 205 (336)
T 3h4j_B 153 GLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205 (336)
T ss_dssp SCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSS
T ss_pred ccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCC
Confidence 999765432210 222 67899999999999999984
No 79
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.97 E-value=2.6e-31 Score=267.47 Aligned_cols=177 Identities=22% Similarity=0.328 Sum_probs=152.8
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|+..+.||+|+||.||+|+..++..||+|+++... ...+++.+|++++++++||||+++++++. ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~~ 77 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCS--------KEYP 77 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEEC--------SSSS
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEc--------cCCc
Confidence 35688889999999999999998888899999997543 34578999999999999999999999884 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 152 (268)
T 3sxs_A 78 IYIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTR 152 (268)
T ss_dssp EEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEE
T ss_pred eEEEEEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccce
Confidence 89999999999999999752 3458999999999999999999999 799999999999999999999999999997
Q ss_pred cccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 610 PSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 610 ~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
....... . +.. +.++||||||+++|||+| |.
T Consensus 153 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~ 203 (268)
T 3sxs_A 153 YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGK 203 (268)
T ss_dssp ECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTC
T ss_pred ecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCC
Confidence 6533211 1 224 889999999999999998 63
No 80
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.1e-30 Score=268.44 Aligned_cols=227 Identities=19% Similarity=0.143 Sum_probs=207.8
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcC--CCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEE
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWG--PLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 177 (640)
..++.|+|++|.+....+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++|.+. .+|..+.++++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 589999999999986666678999999999999999963 34677888999999999999999 688889999999999
Q ss_pred EccCccCCccCC--CccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccc-cCCccccCCCCccEEEccCCc
Q 006570 178 VLADNLLNGSVP--DLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRS-EIPSGLKNFDQLKQFDISSNN 251 (640)
Q Consensus 178 ~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~ 251 (640)
++++|++++.++ .+..+++|++|++++|++++..+.. +++|+.|++++|.+++ .+|..+..+++|+.|+|++|+
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 999999999876 4999999999999999998877764 6899999999999987 689999999999999999999
Q ss_pred ccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCC-CCCceeeeccccccCc
Q 006570 252 FVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSN-SLNRTVVSTWNCLSGV 327 (640)
Q Consensus 252 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~-~~l~~l~l~~N~l~~~ 327 (640)
+++..|..+..+++|++|+|++|++++..+..+..+++|+.|++++|++++..|..+..+ ++|+.+++++|.+++.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 999889999999999999999999999877789999999999999999999999999988 4999999999999874
No 81
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.97 E-value=2.1e-31 Score=279.23 Aligned_cols=179 Identities=14% Similarity=0.261 Sum_probs=150.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-----CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-----RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
+.|++.+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|+++++.++||||+++++++.
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~------- 96 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYS------- 96 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEE-------
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEE-------
Confidence 5688899999999999999985 568999999996431 224678999999999999999999999885
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc---e
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT---A 600 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---~ 600 (640)
.....|+|||||++|+|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +
T Consensus 97 -~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 97 -SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp -ETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCE
T ss_pred -eCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcE
Confidence 3456899999999999998886422 34468999999999999999999999 69999999999999987654 9
Q ss_pred EEeCCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||+++........ +.. +.++|||||||++|||++|+
T Consensus 173 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~ 230 (351)
T 3c0i_A 173 KLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGC 230 (351)
T ss_dssp EECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred EEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCC
Confidence 99999999765432210 233 89999999999999999984
No 82
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.97 E-value=2.8e-31 Score=270.35 Aligned_cols=176 Identities=18% Similarity=0.365 Sum_probs=149.8
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||+||+|+..+++.||+|++.... ....+.+.+|++++++++||||+++++++. ...
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~ 73 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH--------TKK 73 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE--------CSS
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEc--------cCC
Confidence 4688889999999999999998789999999996542 233478899999999999999999999985 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (288)
T 1ob3_A 74 RLVLVFEHLDQ-DLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLA 147 (288)
T ss_dssp CEEEEEECCSE-EHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred eEEEEEEecCC-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccc
Confidence 68999999985 99999874 23568999999999999999999999 69999999999999999999999999998
Q ss_pred ccccCCC--------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN--------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~--------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+...... + + + .. +.++|||||||++|||+||.
T Consensus 148 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~ 198 (288)
T 1ob3_A 148 RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198 (288)
T ss_dssp HHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 6543211 0 0 2 23 88999999999999999984
No 83
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.97 E-value=7.8e-32 Score=292.17 Aligned_cols=178 Identities=21% Similarity=0.377 Sum_probs=150.3
Q ss_pred HHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
...++|+..+.||+|+||.||+|+..++..||||+++... ...++|.+|+++|++++||||+++++++. .
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---------~ 250 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS---------E 250 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC---------S
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEc---------C
Confidence 3456788889999999999999998878889999998543 34678999999999999999999999874 1
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.++++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 251 ~~~~iv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~ 326 (452)
T 1fmk_A 251 EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGL 326 (452)
T ss_dssp SSCEEEECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCT
T ss_pred CceEEEehhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCcc
Confidence 3479999999999999999642 23458999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 608 PLPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 608 a~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
++....... . ... +.++|||||||++|||+| |
T Consensus 327 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g 378 (452)
T 1fmk_A 327 ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 378 (452)
T ss_dssp TC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred ceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCC
Confidence 986542211 0 234 889999999999999999 5
No 84
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.97 E-value=6.7e-31 Score=268.02 Aligned_cols=176 Identities=18% Similarity=0.331 Sum_probs=148.0
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.||+|+||+||+|+. .+++.||||+++.... ...+.+.+|++++++++||||+++++++. .+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~ 73 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH--------SD 73 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE--------ET
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEE--------eC
Confidence 4688889999999999999995 4689999999975432 23467889999999999999999999985 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++ ++.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 74 ~~~~lv~e~~~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 74 KKLTLVFEFCDQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp TEEEEEEECCSE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 568999999976 67666653 24569999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ ... +.++|||||||++|||+||.
T Consensus 148 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~ 199 (292)
T 3o0g_A 148 ARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 199 (292)
T ss_dssp CEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTS
T ss_pred ceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcC
Confidence 9765322110 222 88999999999999999873
No 85
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.97 E-value=5.3e-31 Score=278.27 Aligned_cols=172 Identities=20% Similarity=0.301 Sum_probs=142.6
Q ss_pred CCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 456 TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
.+.||+|+||.||+|+. .+|+.||+|+++.......+++.+|++++++++||||+++++++. .....++||
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~--------~~~~~~lv~ 165 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE--------SKNDIVLVM 165 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE--------CSSEEEEEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEE--------ECCEEEEEE
Confidence 56799999999999985 568999999998654445678999999999999999999999985 345689999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee--cCCCceEEeCCCCCcccc
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL--DKALTAKLSGYNIPLPSK 612 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl--~~~~~~kl~DfGla~~~~ 612 (640)
||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++...
T Consensus 166 E~~~~~~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 166 EYVDGGELFDRIID--ESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp ECCTTCEEHHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 99999999999864 23458999999999999999999999 699999999999999 567899999999998654
Q ss_pred CCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 613 VRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 613 ~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..... ... +.++|||||||++|||++|.
T Consensus 241 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~ 285 (373)
T 2x4f_A 241 PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL 285 (373)
T ss_dssp TTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSS
T ss_pred CccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCC
Confidence 32211 233 78999999999999999984
No 86
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.97 E-value=5e-31 Score=290.20 Aligned_cols=179 Identities=20% Similarity=0.241 Sum_probs=153.6
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++|++++||||+++++++.
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~-------- 254 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-------- 254 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEe--------
Confidence 45688889999999999999995 46999999999753 2344577899999999999999999999875
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
+....|+||||+++|+|.+++... ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 255 ~~~~l~lVmEy~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DF 330 (576)
T 2acx_A 255 TKDALCLVLTLMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDL 330 (576)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEec
Confidence 446789999999999999999752 23458999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +.++|||||||++|||++|.
T Consensus 331 Gla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~ 382 (576)
T 2acx_A 331 GLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382 (576)
T ss_dssp TTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSS
T ss_pred ccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCC
Confidence 999865432211 233 89999999999999999984
No 87
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=9.6e-30 Score=276.03 Aligned_cols=225 Identities=18% Similarity=0.099 Sum_probs=206.8
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..++.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.|++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 58999999999999988999999999999999999999888899999999999999999999777777999999999999
Q ss_pred cCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCC----cccccceeecccCcccccCCccccCCCCccEEEccCCcccC
Q 006570 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (640)
Q Consensus 180 ~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 254 (640)
++|+|+..++. |.++++|++|+|++|+..+.++. .+++|+.|+|++|++++ +| .+..+++|+.|+|++|+|++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcc
Confidence 99999988886 99999999999999654444443 27899999999999985 44 58899999999999999999
Q ss_pred cCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 255 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..+++|+.+++++|.+.-
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 999999999999999999999999999999999999999999999998888889999999999999998754
No 88
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.97 E-value=3.4e-31 Score=279.22 Aligned_cols=177 Identities=20% Similarity=0.258 Sum_probs=141.7
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC---CChHHHHHHHHH-HhcCCCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVEL-LSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|+..+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|..+ ++.++||||+++++++.
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~------- 109 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ------- 109 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEE-------
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEE-------
Confidence 357888999999999999999954 588999999976432 233456677776 57789999999999885
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 110 -~~~~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 110 -TADKLYFVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp -CSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECC
T ss_pred -eCCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEee
Confidence 45678999999999999999975 3458899999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++....... + +.. +.++|||||||++|||++|.
T Consensus 183 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~ 236 (373)
T 2r5t_A 183 FGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236 (373)
T ss_dssp CCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCC
Confidence 999975321110 0 233 88999999999999999984
No 89
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.97 E-value=9.3e-31 Score=264.74 Aligned_cols=177 Identities=17% Similarity=0.243 Sum_probs=153.7
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|+..+.||+|+||.||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++. .+.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~ 79 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE--------DNT 79 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------CSS
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEe--------cCC
Confidence 356888999999999999999954 57799999998766666789999999999999999999999985 445
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEEeCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKLSGY 605 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~Df 605 (640)
..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+||
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Df 153 (277)
T 3f3z_A 80 DIYLVMELCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDF 153 (277)
T ss_dssp EEEEEEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEeccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEec
Confidence 68999999999999999875 3458999999999999999999999 699999999999999 78899999999
Q ss_pred CCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++......... ... +.++||||||+++|||++|.
T Consensus 154 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~ 204 (277)
T 3f3z_A 154 GLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGY 204 (277)
T ss_dssp TTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSS
T ss_pred ccceeccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCC
Confidence 999765432211 233 88999999999999999984
No 90
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.97 E-value=3.5e-31 Score=268.69 Aligned_cols=177 Identities=16% Similarity=0.301 Sum_probs=149.8
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|+..+.||+|+||.||+|+..++..||||+++... ...+++.+|++++++++||||+++++++. ....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~~~ 93 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT--------KQRP 93 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEEC--------SSSS
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEe--------cCCC
Confidence 45788889999999999999998888899999998543 34578999999999999999999999884 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 168 (283)
T 3gen_A 94 IFIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSR 168 (283)
T ss_dssp EEEEECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGG
T ss_pred eEEEEeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccc
Confidence 89999999999999999752 3458999999999999999999999 799999999999999999999999999997
Q ss_pred cccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 610 PSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 610 ~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
....... + ... +.++||||||+++|||+| |.
T Consensus 169 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~ 219 (283)
T 3gen_A 169 YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219 (283)
T ss_dssp GBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTC
T ss_pred cccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 5532110 1 233 889999999999999998 63
No 91
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=7.8e-30 Score=278.75 Aligned_cols=260 Identities=19% Similarity=0.132 Sum_probs=194.9
Q ss_pred cccEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCc
Q 006570 67 SLKIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG 135 (640)
Q Consensus 67 ~~gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 135 (640)
|..|.|+. ..++.|+|++|.+++.. +..+...+.|+.|+|++|.+.+..|..|.++++|++|+|++|.
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLN-QDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEEC-TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceEC-HhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 34688863 25788999999885433 2234456899999999999998889999999999999999999
Q ss_pred CcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc
Q 006570 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL 214 (640)
Q Consensus 136 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~ 214 (640)
+++..+..|.++++|++|+|++|.+.+..|..|.++++|+.|+|++|.+++..+. |.++++|++|+|++|++++..+..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 9776666789999999999999999988898999999999999999999998876 899999999999999998766542
Q ss_pred ---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC------------------------ccccCCCCCc
Q 006570 215 ---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ------------------------SFLFSLPSIL 267 (640)
Q Consensus 215 ---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p------------------------~~~~~l~~L~ 267 (640)
+++|+.|+|++|.+++..+..|.++++|+.|++++|.+.+.+| ..+..+++|+
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 251 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLR 251 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCC
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccC
Confidence 6788888888888887777777777666666666554444433 3455555566
Q ss_pred EEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 268 YLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 268 ~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
.|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|.+++.
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 311 (477)
T 2id5_A 252 FLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTL 311 (477)
T ss_dssp EEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCC
T ss_pred eeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCcee
Confidence 666666655555555555555666666666666555555555566666666666655543
No 92
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.97 E-value=6.9e-31 Score=283.07 Aligned_cols=178 Identities=16% Similarity=0.253 Sum_probs=150.2
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|+..+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++.
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-------- 80 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS-------- 80 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE--------
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE--------
Confidence 456788999999999999999984 5789999999975432 23467899999999999999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec---CCCceEE
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD---KALTAKL 602 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~---~~~~~kl 602 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++ +++.+||
T Consensus 81 ~~~~~~lv~E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL 154 (444)
T 3soa_A 81 EEGHHYLIFDLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKL 154 (444)
T ss_dssp CSSEEEEEECCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEE
T ss_pred ECCEEEEEEEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEE
Confidence 45678999999999999999975 3568999999999999999999999 7999999999999998 4588999
Q ss_pred eCCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++........ +.. +.++||||+||++|||++|.
T Consensus 155 ~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~ 210 (444)
T 3soa_A 155 ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGY 210 (444)
T ss_dssp CCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred ccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCC
Confidence 999999765432211 233 88999999999999999984
No 93
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.97 E-value=8.2e-31 Score=275.68 Aligned_cols=176 Identities=18% Similarity=0.225 Sum_probs=146.3
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|+..+.||+|+||+||+++.. +++.||||++.... ...+.+.+|+.++++++||||+++++++. ...
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~--------~~~ 89 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVIL--------TPT 89 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEE--------CSS
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEe--------eCC
Confidence 357888999999999999999954 78999999997543 33477899999999999999999999986 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc--eEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT--AKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~--~kl~DfG 606 (640)
..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||
T Consensus 90 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg 163 (361)
T 3uc3_A 90 HLAIIMEYASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFG 163 (361)
T ss_dssp EEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred EEEEEEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecC
Confidence 68999999999999999965 3458999999999999999999998 79999999999999988765 9999999
Q ss_pred CCccccCCCCc----------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 164 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 215 (361)
T 3uc3_A 164 YSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGA 215 (361)
T ss_dssp CC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCC
Confidence 99743221110 222 44589999999999999984
No 94
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.97 E-value=6.3e-31 Score=275.31 Aligned_cols=176 Identities=18% Similarity=0.280 Sum_probs=139.5
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
..+.|+..+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++. ..
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~--------~~ 120 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFE--------TP 120 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEE--------CS
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEe--------cC
Confidence 3467888999999999999999964 57899999997543 3467889999999999999999999985 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---CCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---ALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~D 604 (640)
...++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|
T Consensus 121 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~D 194 (349)
T 2w4o_A 121 TEISLVLELVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIAD 194 (349)
T ss_dssp SEEEEEECCCCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECC
T ss_pred CeEEEEEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEcc
Confidence 568999999999999999964 4568999999999999999999999 69999999999999975 89999999
Q ss_pred CCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ +.. +.++|||||||++|||++|.
T Consensus 195 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 247 (349)
T 2w4o_A 195 FGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGF 247 (349)
T ss_dssp CC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCC
Confidence 9999865432110 334 88999999999999999984
No 95
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.97 E-value=1.1e-30 Score=283.34 Aligned_cols=176 Identities=22% Similarity=0.345 Sum_probs=152.0
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++. .
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~--------~ 87 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS--------T 87 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE--------C
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE--------E
Confidence 56888899999999999999954 79999999997532 234578999999999999999999999885 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 88 ~~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG 161 (476)
T 2y94_A 88 PSDIFMVMEYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFG 161 (476)
T ss_dssp SSEEEEEEECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCS
T ss_pred CCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEecc
Confidence 4568999999999999999964 4568999999999999999999998 699999999999999999999999999
Q ss_pred CCccccCCCCc----------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +. . +.++||||+||++|||++|.
T Consensus 162 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~ 213 (476)
T 2y94_A 162 LSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGT 213 (476)
T ss_dssp SCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSS
T ss_pred chhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCC
Confidence 99865432110 22 2 67899999999999999984
No 96
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.97 E-value=2.1e-31 Score=278.14 Aligned_cols=184 Identities=20% Similarity=0.344 Sum_probs=153.4
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEe
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCIL 518 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 518 (640)
+....++|+..+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~- 120 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA- 120 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-
Confidence 3445678999999999999999999963 347899999975432 23467899999999999999999999984
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCC---------------------CCCCCHHHHHHHHHHHHHHhhhcccC
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK---------------------KDMLKWPQRMAIIIGATRGVQFLHTG 577 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~yLH~~ 577 (640)
.+...++||||+++|+|.++++.... ...+++.+++.++.|+++||+|||+
T Consensus 121 -------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~- 192 (343)
T 1luf_A 121 -------VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE- 192 (343)
T ss_dssp -------SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred -------cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence 34568999999999999999975321 2568999999999999999999999
Q ss_pred CCCCeeccCCCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHh
Q 006570 578 VAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVIT 637 (640)
Q Consensus 578 ~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ell 637 (640)
.+|+||||||+||++++++.+||+|||+++....... + +.. +.++|||||||++|||+
T Consensus 193 --~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 270 (343)
T 1luf_A 193 --RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270 (343)
T ss_dssp --TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred --CCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHH
Confidence 6999999999999999999999999999875422110 0 233 88999999999999999
Q ss_pred h-cC
Q 006570 638 L-CC 640 (640)
Q Consensus 638 t-G~ 640 (640)
| |.
T Consensus 271 t~g~ 274 (343)
T 1luf_A 271 SYGL 274 (343)
T ss_dssp TTTC
T ss_pred hcCC
Confidence 8 63
No 97
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.97 E-value=2.9e-31 Score=270.08 Aligned_cols=176 Identities=23% Similarity=0.370 Sum_probs=150.4
Q ss_pred cCCCCCCccccCCccceEEEEeC-CC-------cEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DG-------SRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
++|...+.||+|+||.||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 82 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCV----- 82 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEEC-----
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----
Confidence 56788899999999999999853 23 479999997666566788999999999999999999999985
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc---
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT--- 599 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~--- 599 (640)
.+...++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 83 ---~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~ 154 (289)
T 4fvq_A 83 ---CGDENILVQEFVKFGSLDTYLKK--NKNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKT 154 (289)
T ss_dssp ---CTTCCEEEEECCTTCBHHHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGG
T ss_pred ---eCCCCEEEEECCCCCCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccc
Confidence 34457999999999999999975 23348999999999999999999999 69999999999999998887
Q ss_pred -----eEEeCCCCCccccCCCC-------c------c-CC-CCccceehhhHHHHHHhhc
Q 006570 600 -----AKLSGYNIPLPSKVRNT-------L------S-FH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 600 -----~kl~DfGla~~~~~~~~-------~------~-~~-~~~~DvwS~Gvvl~elltG 639 (640)
+||+|||++........ . + .. +.++|||||||++|||++|
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g 214 (289)
T 4fvq_A 155 GNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214 (289)
T ss_dssp TBCCEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTT
T ss_pred cccceeeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcC
Confidence 99999999976533211 0 2 33 8899999999999999996
No 98
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.97 E-value=2.4e-30 Score=266.04 Aligned_cols=184 Identities=27% Similarity=0.391 Sum_probs=148.9
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-----CCChHHHHHHHHHHhcCC---CcccceeeeEEEec
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-----RHLPQSLMQHVELLSKLR---HRHLVSILGHCILT 519 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~ 519 (640)
..++|++.+.||+|+||+||+|+. .+++.||||++.... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999994 568999999997432 122457778888877764 99999999998642
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
.. ......++||||++ |+|.+++... ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 87 ~~---~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 87 RT---DREIKVTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CS---SSEEEEEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSC
T ss_pred CC---CCceeEEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCC
Confidence 21 12235799999997 5999999752 23448999999999999999999999 69999999999999999999
Q ss_pred eEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 159 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~ 216 (308)
T 3g33_A 159 VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216 (308)
T ss_dssp EEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSS
T ss_pred EEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCC
Confidence 999999999865432211 334 88999999999999999984
No 99
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.97 E-value=6.7e-31 Score=269.22 Aligned_cols=179 Identities=20% Similarity=0.373 Sum_probs=149.2
Q ss_pred cCCCCCCccccCCccceEEEEe-----CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
..|+..+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|++++++++||||+++++++...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 95 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED----- 95 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC-----
Confidence 4477789999999999999983 358899999997543 33457899999999999999999999998631
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 96 -~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~D 169 (302)
T 4e5w_A 96 -GGNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGD 169 (302)
T ss_dssp ---CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECC
T ss_pred -CCceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECc
Confidence 234589999999999999999642 3458999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ +.. +.++||||||+++|||+||+
T Consensus 170 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 226 (302)
T 4e5w_A 170 FGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC 226 (302)
T ss_dssp CTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred ccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHcc
Confidence 9999765432210 223 77899999999999999985
No 100
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.97 E-value=5.8e-31 Score=270.64 Aligned_cols=177 Identities=19% Similarity=0.336 Sum_probs=144.6
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||.||+|+.. ++.||||++... ...+.+.+|++++++++||||+++++++. +..
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----------~~~ 74 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL----------NPV 74 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT----------TTT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc----------CCc
Confidence 46777899999999999999975 789999998643 34578999999999999999999999763 126
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc-eEEeCCCCCc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT-AKLSGYNIPL 609 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~-~kl~DfGla~ 609 (640)
++||||+++|+|.++++.......+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++.
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~ 154 (307)
T 2eva_A 75 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC 154 (307)
T ss_dssp EEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--
T ss_pred EEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccc
Confidence 999999999999999986443345789999999999999999999854458999999999999998876 7999999997
Q ss_pred cccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ +.. +.++|||||||++|||+||.
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 200 (307)
T 2eva_A 155 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR 200 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred ccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 65322111 334 88999999999999999984
No 101
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.97 E-value=1e-30 Score=284.25 Aligned_cols=179 Identities=18% Similarity=0.320 Sum_probs=141.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||+||+|+. .+++.||||++..... ...+++.+|+++|++++||||+++++++.... .+..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---~~~~ 129 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKD---VEKF 129 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC---TTTC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCC---cccC
Confidence 6789999999999999999984 4689999999965322 23467889999999999999999999985321 1234
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...|+||||+. |+|.+++.. ...+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 130 DELYVVLEIAD-SDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp CCEEEEECCCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccc-cchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeeccccc
Confidence 56899999985 699999964 4569999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCC-----------------------------------C--c--------cCC-CCccceehhhHHHHHHhhc
Q 006570 608 PLPSKVRN-----------------------------------T--L--------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 608 a~~~~~~~-----------------------------------~--~--------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
++...... + + ... +.++|||||||++|||+||
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 98653110 0 0 233 8899999999999999984
No 102
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.97 E-value=2.5e-31 Score=287.97 Aligned_cols=178 Identities=17% Similarity=0.209 Sum_probs=142.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||+++.. .....+.+.+|+++++.++||||+++++++.
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-------- 218 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-------- 218 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEE--------
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe--------
Confidence 46788899999999999999994 56899999999753 2233466788999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ .+|+||||||+|||++.++.+||+||
T Consensus 219 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DF 293 (446)
T 4ejn_A 219 THDRLCFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDF 293 (446)
T ss_dssp ETTEEEEEECCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCC
T ss_pred eCCEEEEEEeeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccC
Confidence 34568999999999999999975 34689999999999999999999962 48999999999999999999999999
Q ss_pred CCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +.++|||||||++|||++|.
T Consensus 294 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 346 (446)
T 4ejn_A 294 GLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346 (446)
T ss_dssp CCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCC
Confidence 999764221110 334 89999999999999999984
No 103
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=3.9e-31 Score=278.20 Aligned_cols=187 Identities=17% Similarity=0.216 Sum_probs=155.1
Q ss_pred CCCHHHHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-----Ccccceee
Q 006570 440 GFSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-----HRHLVSIL 513 (640)
Q Consensus 440 ~~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~ 513 (640)
.+++.+.....++|.+.+.||+|+||+||+|+. .+++.||||+++... ...+.+..|+++++.++ ||||++++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 344444445668899999999999999999995 568899999997422 23466788999999986 99999999
Q ss_pred eEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCcee
Q 006570 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593 (640)
Q Consensus 514 g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL 593 (640)
+++.. ....++||||+ +|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||
T Consensus 103 ~~~~~--------~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIl 169 (360)
T 3llt_A 103 GKFMY--------YDHMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENIL 169 (360)
T ss_dssp EEEEE--------TTEEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred ceeeE--------CCeeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEE
Confidence 98862 35689999999 88999999762 33458999999999999999999999 79999999999999
Q ss_pred ecC-------------------------CCceEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHH
Q 006570 594 LDK-------------------------ALTAKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILII 633 (640)
Q Consensus 594 l~~-------------------------~~~~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl 633 (640)
++. ++.+||+|||+++........ +.. +.++|||||||++
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 249 (360)
T 3llt_A 170 LDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249 (360)
T ss_dssp ESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred EccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence 976 789999999999865432211 334 8999999999999
Q ss_pred HHHhhcC
Q 006570 634 CVITLCC 640 (640)
Q Consensus 634 ~elltG~ 640 (640)
|||+||.
T Consensus 250 ~ell~g~ 256 (360)
T 3llt_A 250 AELYTGS 256 (360)
T ss_dssp HHHHHSS
T ss_pred HHHHHCC
Confidence 9999984
No 104
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.97 E-value=9.7e-31 Score=277.47 Aligned_cols=179 Identities=19% Similarity=0.363 Sum_probs=150.1
Q ss_pred hcCCCCCCccccCCccceEEEEeC--------CCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEec
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 519 (640)
.++|.+.+.||+|+||.||+|+.. ++..||||+++.... ...+++.+|+++++++ +||||+++++++.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-- 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec--
Confidence 467888899999999999999842 245799999975432 2336789999999999 9999999999884
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
.....++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+ .+|+|||
T Consensus 146 ------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~D 216 (382)
T 3tt0_A 146 ------QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRD 216 (382)
T ss_dssp ------SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred ------cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCC
Confidence 34558999999999999999976321 2459999999999999999999999 6999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|||+|||+++++.+||+|||+++........ +.. +.++|||||||++|||+| |
T Consensus 217 lkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g 290 (382)
T 3tt0_A 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 290 (382)
T ss_dssp CCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999865432110 333 889999999999999998 6
No 105
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.97 E-value=5.4e-31 Score=272.77 Aligned_cols=186 Identities=15% Similarity=0.270 Sum_probs=140.2
Q ss_pred HhcCCCCCCccccCCccceEEEEeCC-Cc---EEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTD-GS---RVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~~---~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
..++|+..+.||+|+||.||+|+... +. .||||+++... ....+++.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 44678899999999999999999543 32 79999997542 23357899999999999999999999998632111
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccC---CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWK---KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
......++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||++++++.
T Consensus 101 --~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 101 --GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSC
T ss_pred --cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCC
Confidence 11123489999999999999996432 22368999999999999999999999 69999999999999999999
Q ss_pred eEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 600 AKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+||+|||+++....... + +.. +.++|||||||++|||++ |
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g 236 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRG 236 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCC
Confidence 99999999976532211 0 233 889999999999999999 5
No 106
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.97 E-value=2.5e-31 Score=269.25 Aligned_cols=177 Identities=19% Similarity=0.371 Sum_probs=151.2
Q ss_pred HhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
..++|+..+.||+|+||.||+|+..++..||||.++... ...+.+.+|++++++++||||+++++++. .+
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---------~~ 80 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT---------QE 80 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC---------SS
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc---------CC
Confidence 346788899999999999999998888899999997543 35678999999999999999999999873 23
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 81 ~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 156 (279)
T 1qpc_A 81 PIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLA 156 (279)
T ss_dssp SCEEEEECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CcEEEEecCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCccc
Confidence 479999999999999999642 12358999999999999999999999 69999999999999999999999999999
Q ss_pred ccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 609 LPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 609 ~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+....... . +.. +.++||||||+++|||++ |
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g 207 (279)
T 1qpc_A 157 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207 (279)
T ss_dssp EECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTT
T ss_pred ccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCC
Confidence 76543211 0 233 789999999999999998 5
No 107
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.97 E-value=1.6e-30 Score=285.55 Aligned_cols=179 Identities=20% Similarity=0.279 Sum_probs=152.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|...+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++. .
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~--------~ 256 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE--------T 256 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE--------C
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEe--------e
Confidence 5677888999999999999996 468999999997532 344578899999999999999999998875 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
....|+||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 257 ~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeec
Confidence 466899999999999999997532 24469999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCC--------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT--------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~--------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||++|||+||.
T Consensus 334 Gla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~ 386 (543)
T 3c4z_A 334 GLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386 (543)
T ss_dssp TTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred ceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCC
Confidence 99976532211 0 333 89999999999999999984
No 108
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.97 E-value=1.3e-31 Score=296.40 Aligned_cols=178 Identities=21% Similarity=0.382 Sum_probs=152.6
Q ss_pred HHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
...++|++.+.||+|+||.||+|++.++..||||+++... ...++|.+|+++|++++||||+++++++. .
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~---------~ 333 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS---------E 333 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC---------S
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEe---------e
Confidence 3456788889999999999999998888889999998543 34678999999999999999999999874 1
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++|||||++|+|.++++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 334 ~~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~ 409 (535)
T 2h8h_A 334 EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGL 409 (535)
T ss_dssp SSCEEEECCCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTS
T ss_pred ccceEeeehhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEccccc
Confidence 3479999999999999999642 23458999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCC------C-----c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 608 PLPSKVRN------T-----L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 608 a~~~~~~~------~-----~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
++...... . . ... +.++|||||||++|||+| |
T Consensus 410 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g 461 (535)
T 2h8h_A 410 ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 461 (535)
T ss_dssp TTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTT
T ss_pred ceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 98654211 0 0 233 889999999999999999 5
No 109
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.97 E-value=1e-30 Score=271.71 Aligned_cols=174 Identities=17% Similarity=0.190 Sum_probs=148.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+++++++ +||||+++++++. .+.
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~--------~~~ 78 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGP--------CGK 78 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEE--------ETT
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEe--------cCC
Confidence 5688899999999999999994 678999999987543 235688999999999 9999999999885 245
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc-----eEEe
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT-----AKLS 603 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~-----~kl~ 603 (640)
..++||||+ +|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++. +||+
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~ 152 (330)
T 2izr_A 79 YNAMVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHII 152 (330)
T ss_dssp EEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred ccEEEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEE
Confidence 689999999 99999999752 4569999999999999999999999 69999999999999999887 9999
Q ss_pred CCCCCccccCCCC---------------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNT---------------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~---------------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++....... . +.. +.++|||||||++|||++|.
T Consensus 153 DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~ 214 (330)
T 2izr_A 153 DFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGS 214 (330)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred EcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCC
Confidence 9999986432110 0 233 88999999999999999984
No 110
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.97 E-value=3e-30 Score=260.76 Aligned_cols=175 Identities=21% Similarity=0.351 Sum_probs=135.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++. .
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~ 84 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK--------S 84 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEE--------C
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe--------c
Confidence 5799999999999999999984 568999999997532 234568899999999999999999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+ +|+|.+++.. ...+++.+++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||
T Consensus 85 ~~~~~lv~e~~-~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg 157 (275)
T 2eue_A 85 KDEIIMVIEYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp SSCEEEEEECC-CEEHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSS
T ss_pred CCeEEEEehhc-CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecc
Confidence 45689999999 6789888864 3568999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc----------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +. . +.++|||||||++|||++|.
T Consensus 158 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 209 (275)
T 2eue_A 158 LSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209 (275)
T ss_dssp CC---------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSS
T ss_pred cceeccCcccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCC
Confidence 99765432110 22 2 68999999999999999984
No 111
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.97 E-value=1.2e-30 Score=265.20 Aligned_cols=179 Identities=15% Similarity=0.242 Sum_probs=149.9
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|...+.||+|+||.||+|+. .++..||+|++.... ....+.+.+|++++++++||||+++++++. ...
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------~~~ 93 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE--------DYH 93 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------CSS
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhee--------cCC
Confidence 4578889999999999999995 568899999997654 335688999999999999999999999985 345
Q ss_pred eEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEEeC
Q 006570 529 TVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKLSG 604 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~D 604 (640)
..++||||+++|+|.+++... .....+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~D 170 (285)
T 3is5_A 94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIID 170 (285)
T ss_dssp EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECC
T ss_pred eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEe
Confidence 689999999999999998642 124568999999999999999999999 699999999999999 4568899999
Q ss_pred CCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ ... +.++|||||||++|||++|+
T Consensus 171 fg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~ 222 (285)
T 3is5_A 171 FGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGC 222 (285)
T ss_dssp CCCCCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSS
T ss_pred eecceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCC
Confidence 9999765432211 233 88999999999999999985
No 112
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.97 E-value=1e-30 Score=273.44 Aligned_cols=176 Identities=23% Similarity=0.316 Sum_probs=149.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC---ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH---LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
+.|+..+.||+|+||+||+|+. .+++.||||++...... ..+++.+|++++++++||||+++++++. .
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--------~ 125 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL--------R 125 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------E
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--------E
Confidence 3477889999999999999994 67899999999754322 2357889999999999999999999986 2
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||++ |+|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 126 ~~~~~lv~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG 199 (348)
T 1u5q_A 126 EHTAWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFG 199 (348)
T ss_dssp TTEEEEEEECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred CCeEEEEEecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeecc
Confidence 356899999997 6898888642 3568999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ ... +.++|||||||++|||+||.
T Consensus 200 ~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~ 250 (348)
T 1u5q_A 200 SASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250 (348)
T ss_dssp TCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred CceecCCCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99865432221 123 88999999999999999984
No 113
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.97 E-value=5e-31 Score=273.35 Aligned_cols=176 Identities=22% Similarity=0.354 Sum_probs=146.7
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcE----EEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSR----VSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|+..+.||+|+||+||+|+. .+++. ||+|.+.... ....+.+.+|+.++++++||||+++++++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------- 85 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------- 85 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-------
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------
Confidence 4677889999999999999995 34543 7888775432 233467789999999999999999999873
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+...++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 86 --~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~D 158 (325)
T 3kex_A 86 --GSSLQLVTQYLPLGSLLDHVRQ--HRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVAD 158 (325)
T ss_dssp --BSSEEEEEECCTTCBSHHHHHS--SGGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECS
T ss_pred --CCccEEEEEeCCCCCHHHHHHH--ccccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECC
Confidence 2348999999999999999974 23468999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 605 YNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 605 fGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
||+++........ +.. +.++|||||||++|||+| |.
T Consensus 159 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~ 215 (325)
T 3kex_A 159 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGA 215 (325)
T ss_dssp CSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCC
Confidence 9999875332211 234 889999999999999999 63
No 114
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.97 E-value=7.6e-31 Score=279.04 Aligned_cols=178 Identities=17% Similarity=0.269 Sum_probs=150.8
Q ss_pred cCCCCCCccccC--CccceEEEEeC-CCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEG--SQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|++.+.||+| +||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-------- 96 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI-------- 96 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE--------
Confidence 568889999999 99999999954 689999999976432 23467888999999999999999999986
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++|||||++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~df 172 (389)
T 3gni_B 97 ADNELWVVTSFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGL 172 (389)
T ss_dssp ETTEEEEEEECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCG
T ss_pred ECCEEEEEEEccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEccc
Confidence 345689999999999999999752 23568999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCC------------------Cc------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRN------------------TL------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~------------------~~------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|.+....... .. + .. +.++|||||||++|||++|.
T Consensus 173 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~ 234 (389)
T 3gni_B 173 RSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH 234 (389)
T ss_dssp GGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSS
T ss_pred ccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCC
Confidence 9875431110 00 2 34 88999999999999999984
No 115
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.97 E-value=1.4e-30 Score=267.67 Aligned_cols=175 Identities=22% Similarity=0.337 Sum_probs=145.9
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|...+.||+|+||.||+|+.. ..+|+|+++.... ...+.+.+|++++++++||||+++++++. .
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---------~ 103 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT---------K 103 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---------S
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc---------c
Confidence 357888999999999999999864 4699998875432 23467899999999999999999999863 2
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 104 ~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~ 178 (307)
T 3lb7_A 104 DNLAIVTQWCEGSSLYKHLHV--QETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGL 178 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHT--SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCS
T ss_pred CcEEEEEecCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCC
Confidence 347999999999999999974 34568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCC----------Cc------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN----------TL------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~----------~~------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++...... +. ... +.++|||||||++|||+||.
T Consensus 179 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~ 234 (307)
T 3lb7_A 179 ATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234 (307)
T ss_dssp SCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 97543210 00 122 67899999999999999984
No 116
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.97 E-value=2.6e-30 Score=266.63 Aligned_cols=176 Identities=19% Similarity=0.381 Sum_probs=147.6
Q ss_pred cCCCC-CCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDP-TNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~-~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
+.|.+ .+.||+|+||.||+|+ ..+++.||||++........+.+.+|++++.++ +||||+++++++. ..
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~--------~~ 83 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFE--------EE 83 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEE--------ET
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEe--------eC
Confidence 45766 4789999999999999 457899999999876556678899999999985 7999999999985 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc---eEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT---AKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~D 604 (640)
...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~D 157 (316)
T 2ac3_A 84 DRFYLVFEKMRGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICD 157 (316)
T ss_dssp TEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECC
T ss_pred CEEEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEE
Confidence 568999999999999999975 3458999999999999999999999 69999999999999998766 99999
Q ss_pred CCCCccccCCC---------------Cc---------c-----CC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRN---------------TL---------S-----FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~---------------~~---------~-----~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++...... +. . .. +.++|||||||++|||++|.
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~ 223 (316)
T 2ac3_A 158 FDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY 223 (316)
T ss_dssp TTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSS
T ss_pred ccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCC
Confidence 99987543110 00 1 23 78999999999999999984
No 117
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.97 E-value=3e-30 Score=267.49 Aligned_cols=168 Identities=18% Similarity=0.245 Sum_probs=142.5
Q ss_pred CCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCCeEEEE
Q 006570 456 TNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGSTVFLV 533 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~~~~lv 533 (640)
.+.||+|+||.||+|+. .+++.||||++... ....+.+|+++++.+. ||||+++++++. .+...++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~--------~~~~~~lv 84 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFH--------DQLHTFLV 84 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEE--------CSSEEEEE
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEE--------cCCEEEEE
Confidence 47899999999999995 46899999999743 3467889999999997 999999999985 44668999
Q ss_pred EEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC---ceEEeCCCCCcc
Q 006570 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL---TAKLSGYNIPLP 610 (640)
Q Consensus 534 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~---~~kl~DfGla~~ 610 (640)
|||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++.
T Consensus 85 ~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 85 MELLNGGELFERIKK---KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp ECCCCSCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred EEccCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 999999999999975 4568999999999999999999998 7999999999999998765 899999999976
Q ss_pred ccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 611 SKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 611 ~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... +.. +.++|||||||++|||++|.
T Consensus 159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~ 206 (325)
T 3kn6_A 159 KPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206 (325)
T ss_dssp CCC----------------------CCCCHHHHHHHHHHHHHHHHHSS
T ss_pred cCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCC
Confidence 5322110 233 88999999999999999984
No 118
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.97 E-value=2.3e-30 Score=262.02 Aligned_cols=178 Identities=20% Similarity=0.368 Sum_probs=149.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 81 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE-------- 81 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE--------
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc--------
Confidence 35688899999999999999995 578999999997532 234578999999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 82 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~df 156 (278)
T 3cok_A 82 DSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADF 156 (278)
T ss_dssp CSSEEEEEEECCTTEEHHHHHHT--CSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCC
T ss_pred cCCeEEEEEecCCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEee
Confidence 34568999999999999999974 33568999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++......... +.. +.++||||||+++|||++|.
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 209 (278)
T 3cok_A 157 GLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209 (278)
T ss_dssp TTCEECC----------------------------CTHHHHHHHHHHHHHHSS
T ss_pred cceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 999765322110 223 78999999999999999984
No 119
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.97 E-value=6.9e-31 Score=270.60 Aligned_cols=179 Identities=21% Similarity=0.369 Sum_probs=149.7
Q ss_pred hcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.++|.+.+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----- 96 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS----- 96 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe-----
Confidence 46788889999999999999984 2357899999975432 23467899999999999999999999884
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCC---------------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCC
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKK---------------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPG 581 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ 581 (640)
.....++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+ .+
T Consensus 97 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ 170 (314)
T 2ivs_A 97 ---QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MK 170 (314)
T ss_dssp ---SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred ---cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CC
Confidence 34558999999999999999976322 2348899999999999999999999 69
Q ss_pred eeccCCCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 582 IFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 582 iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|+||||||+||++++++.+||+|||+++....... + +.. +.++|||||||++|||+| |
T Consensus 171 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 249 (314)
T 2ivs_A 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249 (314)
T ss_dssp EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred CcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999976532211 0 233 889999999999999998 6
No 120
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.97 E-value=3.9e-31 Score=274.46 Aligned_cols=176 Identities=19% Similarity=0.393 Sum_probs=143.4
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcE----EEEEEeecc-cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSR----VSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|+..+.||+|+||+||+|+. .+++. ||+|.++.. .....+++.+|++++++++||||++++++|..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 88 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES------
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec------
Confidence 5688889999999999999995 34443 688887543 23456789999999999999999999999862
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
...++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 89 ---~~~~~v~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~D 160 (327)
T 3poz_A 89 ---STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp ---SSEEEEEECCTTCBHHHHHHH--STTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECC
T ss_pred ---CCeEEEEEecCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEcc
Confidence 237899999999999999975 34568999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 605 YNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 605 fGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
||+++........ +.. +.++|||||||++|||+| |.
T Consensus 161 fg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~ 217 (327)
T 3poz_A 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217 (327)
T ss_dssp TTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCC
Confidence 9999764322110 233 889999999999999999 63
No 121
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.97 E-value=2.6e-30 Score=272.05 Aligned_cols=189 Identities=15% Similarity=0.240 Sum_probs=155.4
Q ss_pred HHHHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCC-----------hHHHHHHHHHHhcCCCcccce
Q 006570 443 LEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL-----------PQSLMQHVELLSKLRHRHLVS 511 (640)
Q Consensus 443 ~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 511 (640)
.+++....++|+..+.||+|+||.||+|+..+|+.||||++....... .+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 567888899999999999999999999998789999999996532211 267899999999999999999
Q ss_pred eeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCc
Q 006570 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTEN 591 (640)
Q Consensus 512 l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~N 591 (640)
+++++..... ......++||||++ |+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+|
T Consensus 94 ~~~~~~~~~~---~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~N 164 (362)
T 3pg1_A 94 LRDIFVHFEE---PAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGN 164 (362)
T ss_dssp CSEEEEECCT---TTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred eeeeEEeccC---CCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHH
Confidence 9999864321 23457899999998 699998874 34568999999999999999999999 699999999999
Q ss_pred eeecCCCceEEeCCCCCccccCCCCc----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 592 ILLDKALTAKLSGYNIPLPSKVRNTL----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 592 ILl~~~~~~kl~DfGla~~~~~~~~~----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++.++.+||+|||+++........ + .. +.++|||||||++|||++|.
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~ 231 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231 (362)
T ss_dssp EEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSS
T ss_pred EEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCC
Confidence 99999999999999999754322110 2 33 88999999999999999984
No 122
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.97 E-value=4.8e-31 Score=273.73 Aligned_cols=179 Identities=17% Similarity=0.296 Sum_probs=153.0
Q ss_pred cCCCCCCccccCCccceEEEEe-----CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. +
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~ 96 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG------P 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC------S
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec------C
Confidence 5678889999999999999984 3588999999986554455779999999999999999999998863 2
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Df 171 (327)
T 3lxl_A 97 GRQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADF 171 (327)
T ss_dssp SSCEEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCG
T ss_pred CCceEEEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEccc
Confidence 345689999999999999999752 2358999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... + +.. +.++|||||||++|||++|+
T Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~ 227 (327)
T 3lxl_A 172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYC 227 (327)
T ss_dssp GGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred ccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCC
Confidence 99986532221 0 223 78999999999999999985
No 123
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.97 E-value=1.5e-30 Score=282.49 Aligned_cols=180 Identities=17% Similarity=0.278 Sum_probs=146.4
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||+||+|+ ..+++.||||++.... ....+++.+|+++++.++||||+++++++... +..+.
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~--~~~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ--KTLEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC--CSTTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccC--Ccccc
Confidence 4678889999999999999998 4568999999997542 22346788999999999999999999988532 11123
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+|||||++ +|.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEE
Confidence 4568999999976 57777742 38999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++||||+||++|||++|.
T Consensus 210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~ 260 (464)
T 3ttj_A 210 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260 (464)
T ss_dssp CC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred eeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCC
Confidence 99876432111 334 88999999999999999984
No 124
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.97 E-value=2.3e-30 Score=267.95 Aligned_cols=176 Identities=22% Similarity=0.296 Sum_probs=151.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC------ChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
++|++.+.||+|+||.||+|+. .+|+.||||+++..... ..+++.+|++++++++||||+++++++.
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------ 85 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE------ 85 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE------
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe------
Confidence 4588899999999999999995 46899999999754321 3578999999999999999999999885
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC----c
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL----T 599 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~----~ 599 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .
T Consensus 86 --~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~ 157 (321)
T 2a2a_A 86 --NRTDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPH 157 (321)
T ss_dssp --CSSEEEEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCC
T ss_pred --cCCEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCC
Confidence 34568999999999999999964 4568999999999999999999999 6999999999999999887 7
Q ss_pred eEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 158 ~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 215 (321)
T 2a2a_A 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 215 (321)
T ss_dssp EEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred EEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCC
Confidence 999999999765432111 233 88999999999999999984
No 125
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.97 E-value=1.1e-30 Score=271.94 Aligned_cols=178 Identities=16% Similarity=0.255 Sum_probs=151.4
Q ss_pred HhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC--------CChHHHHHHHHHHhcCCCcccceeeeEEEec
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--------HLPQSLMQHVELLSKLRHRHLVSILGHCILT 519 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 519 (640)
..++|+..+.||+|+||.||+|+ ..+++.||||+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~-- 99 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE-- 99 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE--
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--
Confidence 45678999999999999999998 45689999999975431 12346788999999999999999999885
Q ss_pred ccCCCCCCCeEEEEEEccCCC-CHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 520 YQDHPNTGSTVFLVLEHISNG-SLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~G-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
.....++||||+.+| +|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++
T Consensus 100 ------~~~~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~ 167 (335)
T 3dls_A 100 ------NQGFFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDF 167 (335)
T ss_dssp ------CSSEEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTS
T ss_pred ------eCCEEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCC
Confidence 455689999999877 99999964 4468999999999999999999999 6999999999999999999
Q ss_pred ceEEeCCCCCccccCCCCc----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNTL----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++........ + .. +.++|||||||++|||++|.
T Consensus 168 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~ 227 (335)
T 3dls_A 168 TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEE 227 (335)
T ss_dssp CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSS
T ss_pred cEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCC
Confidence 9999999999865433211 2 22 67899999999999999984
No 126
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.1e-30 Score=272.88 Aligned_cols=181 Identities=20% Similarity=0.381 Sum_probs=149.3
Q ss_pred HhcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcC-CCcccceeeeEEEecc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 520 (640)
..++|+..+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~--- 119 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT--- 119 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe---
Confidence 456788899999999999999985 245689999997542 23457899999999999 8999999999885
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCCC--------------------CCCCHHHHHHHHHHHHHHhhhcccCCCC
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKK--------------------DMLKWPQRMAIIIGATRGVQFLHTGVAP 580 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 580 (640)
.....++||||+++|+|.+++...... ..+++..++.++.|++.||+|||+ .
T Consensus 120 -----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~ 191 (344)
T 1rjb_A 120 -----LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---K 191 (344)
T ss_dssp -----SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---T
T ss_pred -----eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---C
Confidence 344589999999999999999753221 348999999999999999999999 7
Q ss_pred CeeccCCCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 581 GIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 581 ~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+|+||||||+||+++.++.+||+|||+++....... + +.. +.++|||||||++|||+| |
T Consensus 192 ~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 271 (344)
T 1rjb_A 192 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271 (344)
T ss_dssp TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred CcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999976533221 1 233 889999999999999998 6
Q ss_pred C
Q 006570 640 C 640 (640)
Q Consensus 640 ~ 640 (640)
.
T Consensus 272 ~ 272 (344)
T 1rjb_A 272 V 272 (344)
T ss_dssp C
T ss_pred C
Confidence 3
No 127
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.4e-31 Score=279.29 Aligned_cols=179 Identities=18% Similarity=0.295 Sum_probs=147.2
Q ss_pred hcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.++|+..+.||+|+||.||+|+.. ++..||||+++... .....++.+|+.++++++||||+++++++.
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~----- 144 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL----- 144 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe-----
Confidence 356788899999999999999843 46689999996432 223457889999999999999999999885
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccC----CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWK----KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
.....++||||+++|+|.++++... ....+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++
T Consensus 145 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~ 218 (367)
T 3l9p_A 145 ---QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPG 218 (367)
T ss_dssp ---SSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSS
T ss_pred ---cCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCC
Confidence 3445799999999999999997632 22468999999999999999999999 6999999999999999554
Q ss_pred ---ceEEeCCCCCccccCCC----------C--c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 599 ---TAKLSGYNIPLPSKVRN----------T--L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 599 ---~~kl~DfGla~~~~~~~----------~--~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
.+||+|||+++...... + + +.. +.++|||||||++|||+| |
T Consensus 219 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g 283 (367)
T 3l9p_A 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 283 (367)
T ss_dssp TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 59999999997431110 0 0 333 889999999999999998 6
No 128
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.97 E-value=3.2e-30 Score=262.22 Aligned_cols=175 Identities=25% Similarity=0.397 Sum_probs=146.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCC-------hHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHL-------PQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
++|+..+.||+|+||.||+|+. .+++.||+|++....... .+.+.+|++++++++||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----- 93 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH----- 93 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET-----
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec-----
Confidence 5688889999999999999995 578999999996543221 267899999999999999999999873
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCC--eeccCCCCCceeecCCCc-
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG--IFGNNLKTENILLDKALT- 599 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NILl~~~~~- 599 (640)
.. .++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.
T Consensus 94 ---~~--~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~ 163 (287)
T 4f0f_A 94 ---NP--PRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDEN 163 (287)
T ss_dssp ---TT--TEEEEECCTTCBHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTT
T ss_pred ---CC--CeEEEEecCCCCHHHHHhc--ccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCC
Confidence 11 2799999999999999874 34569999999999999999999998 57 999999999999988776
Q ss_pred ----eEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 ----AKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ----~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++........ ... +.++|||||||++|||++|.
T Consensus 164 ~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~ 225 (287)
T 4f0f_A 164 APVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225 (287)
T ss_dssp CSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSS
T ss_pred CceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCC
Confidence 999999999755332111 122 77999999999999999984
No 129
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.97 E-value=4.3e-30 Score=262.18 Aligned_cols=178 Identities=18% Similarity=0.258 Sum_probs=148.9
Q ss_pred CCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 452 NFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
+|.....||+|+||.||+|+. .+++.||||.+........+.+.+|+++++.++||||+++++++. .....
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------~~~~~ 94 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS--------ENGFI 94 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEE--------ETTEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEE--------eCCcE
Confidence 455567899999999999994 568899999998765556688999999999999999999999985 23568
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-CCceEEeCCCCCc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-ALTAKLSGYNIPL 609 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-~~~~kl~DfGla~ 609 (640)
++||||+++|+|.+++........+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 95 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp EEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred EEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeeccccc
Confidence 9999999999999999864444567799999999999999999999 69999999999999988 8999999999997
Q ss_pred cccCCCC--------c----------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNT--------L----------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~--------~----------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
....... . . .. +.++||||||+++|||++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~ 222 (295)
T 2clq_A 172 RLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222 (295)
T ss_dssp ESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTS
T ss_pred ccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 6532110 0 1 22 78999999999999999984
No 130
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.97 E-value=6.4e-31 Score=280.18 Aligned_cols=181 Identities=19% Similarity=0.257 Sum_probs=152.6
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|.+.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~------~~~ 82 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET------TTR 82 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT------TTC
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccC------CCC
Confidence 46888899999999999999954 58999999997543 34457788999999999999999999988631 234
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee----cCCCceEEeC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL----DKALTAKLSG 604 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----~~~~~~kl~D 604 (640)
..++||||+++|+|.+++........+++..++.++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (396)
T 4eut_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (396)
T ss_dssp CEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECC
T ss_pred eeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEec
Confidence 679999999999999999764444559999999999999999999999 699999999999999 7788899999
Q ss_pred CCCCccccCCCCc----------------c--------CC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL----------------S--------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~----------------~--------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ . .. +.++|||||||++|||+||.
T Consensus 160 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~ 220 (396)
T 4eut_A 160 FGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220 (396)
T ss_dssp GGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCC
Confidence 9999765432211 1 23 67899999999999999984
No 131
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=7.2e-31 Score=277.14 Aligned_cols=176 Identities=19% Similarity=0.366 Sum_probs=140.3
Q ss_pred CCCCCCccccCCccceEEEEeC--CC--cEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLT--DG--SRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.|+..+.||+|+||.||+|+.. ++ ..||||.++.... ...+++.+|++++++++||||++++++|.. .
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------~ 162 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR-------S 162 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC-------C
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc-------C
Confidence 3556688999999999999853 22 3689999875322 334679999999999999999999998852 2
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.++++. ....+++..++.++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 163 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG 237 (373)
T 3c1x_A 163 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFG 237 (373)
T ss_dssp SSCCEEEEECCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred CCCeEEEEECCCCCCHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecc
Confidence 3457999999999999999974 34568899999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCC--------------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 607 IPLPSKVRNT--------------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 607 la~~~~~~~~--------------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
+++....... + +.. +.++|||||||++|||+||
T Consensus 238 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~ 292 (373)
T 3c1x_A 238 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 292 (373)
T ss_dssp --------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhC
Confidence 9975432110 0 233 8899999999999999994
No 132
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=9.2e-29 Score=256.86 Aligned_cols=223 Identities=19% Similarity=0.239 Sum_probs=163.4
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
+.++.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 46777777777777766667777788888888877777766777777788888888888777 5666554 67777777
Q ss_pred cCccCCccCCC-ccCcCcCCeeEccCCCCCC--CCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCccc
Q 006570 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGP--KFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV 253 (640)
Q Consensus 180 ~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~--~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 253 (640)
++|.+++.++. |.++++|++|++++|+++. ..+.. +++|+.|++++|+++. +|..+. ++|++|+|++|+++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCC
Confidence 77777777665 7777777777777777753 33332 5677777777777763 555443 67777777777777
Q ss_pred CcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 254 GPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 254 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
+..|..|..+++|++|+|++|++++..+..+..+++|+.|++++|+++ .+|..+..+++|+.+++++|++++.++
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~ 280 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGS 280 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccCh
Confidence 777777777777777777777777766667777777777777777777 667777777777777777777776543
No 133
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.96 E-value=1.7e-30 Score=263.23 Aligned_cols=177 Identities=18% Similarity=0.287 Sum_probs=150.0
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|++.+.||+|+||.||+|+. .++..||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 79 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-------- 79 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE--------
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe--------
Confidence 46788899999999999999985 45779999998643 2234577999999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~lv~e~~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Df 153 (279)
T 3fdn_A 80 DATRVYLILEYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADF 153 (279)
T ss_dssp CSSEEEEEECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSC
T ss_pred cCCEEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEec
Confidence 34568999999999999999975 3458999999999999999999998 79999999999999999999999999
Q ss_pred CCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++......... +.. +.++||||||+++|||++|.
T Consensus 154 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 204 (279)
T 3fdn_A 154 GWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204 (279)
T ss_dssp CEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred cccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCC
Confidence 998654322111 233 88999999999999999984
No 134
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=9e-31 Score=273.64 Aligned_cols=184 Identities=17% Similarity=0.245 Sum_probs=149.9
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc-----cCCChHHHHHHHHHHhcCCCcccceeeeEEEec
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK-----QRHLPQSLMQHVELLSKLRHRHLVSILGHCILT 519 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 519 (640)
+....++|+..+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-- 98 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE-- 98 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE--
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc--
Confidence 344567799999999999999999995 56889999999753 2334578999999999999999999999985
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------------------------------CCCCCHHHHHH
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------------------------------KDMLKWPQRMA 562 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------------------------------~~~l~~~~~~~ 562 (640)
.....++||||+++|+|.+++..... ...+++..+..
T Consensus 99 ------~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (345)
T 3hko_A 99 ------DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISN 172 (345)
T ss_dssp ------CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHH
T ss_pred ------cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHH
Confidence 34568999999999999999952110 11235677889
Q ss_pred HHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC--ceEEeCCCCCccccCCC------------C--c-------c-
Q 006570 563 IIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL--TAKLSGYNIPLPSKVRN------------T--L-------S- 618 (640)
Q Consensus 563 i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~--~~kl~DfGla~~~~~~~------------~--~-------~- 618 (640)
++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||+++...... + + +
T Consensus 173 i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 249 (345)
T 3hko_A 173 IMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT 249 (345)
T ss_dssp HHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCS
T ss_pred HHHHHHHHHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccC
Confidence 99999999999999 6999999999999998776 89999999997542211 0 0 1
Q ss_pred -CC-CCccceehhhHHHHHHhhcC
Q 006570 619 -FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 619 -~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.. +.++|||||||++|||++|.
T Consensus 250 ~~~~~~~~DiwslG~il~el~~g~ 273 (345)
T 3hko_A 250 NESYGPKCDAWSAGVLLHLLLMGA 273 (345)
T ss_dssp SSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCCCCcHHHHHHHHHHHHHHHHCC
Confidence 33 78999999999999999984
No 135
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=4.6e-29 Score=259.37 Aligned_cols=223 Identities=19% Similarity=0.209 Sum_probs=166.3
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
+.++.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 56777888888777766777888888888888888887777777888888888888888877 6666654 77888888
Q ss_pred cCccCCccCCC-ccCcCcCCeeEccCCCCCC--CCCCccc--ccceeecccCcccccCCccccCCCCccEEEccCCcccC
Q 006570 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGP--KFPSLSK--NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (640)
Q Consensus 180 ~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~--~~~~~~~--~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 254 (640)
++|++++.++. |.++++|++|++++|.++. ..+..+. +|+.|++++|++++ +|..+. ++|++|+|++|++++
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~ 207 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQA 207 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCc
Confidence 88888777665 7778888888888887752 4443321 77777888888774 555543 577778888888877
Q ss_pred cCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 255 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
..|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|+++ .+|..+..+++|+.+++++|.+++.++
T Consensus 208 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~ 281 (332)
T 2ft3_A 208 IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGV 281 (332)
T ss_dssp CCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCT
T ss_pred cCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccCh
Confidence 77777777778888888888887766667777778888888888777 677777777778888888887776543
No 136
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.96 E-value=1.8e-30 Score=276.74 Aligned_cols=177 Identities=19% Similarity=0.320 Sum_probs=143.6
Q ss_pred cCCCCC-CccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhc-CCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPT-NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSK-LRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~-~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|... +.||+|+||+||+|+. .+++.||||+++. ...+.+|++++.+ .+||||+++++++..... +.
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~----~~ 131 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA----GR 131 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET----TE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeeccc----CC
Confidence 445554 6899999999999995 4689999999963 2567788888744 589999999998753221 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---CCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---ALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~D 604 (640)
...|+|||||++|+|.+++.. .....+++..+..|+.|++.||+|||+ .+|+||||||+|||++. ++.+||+|
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHC-C---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred cEEEEEEEeCCCCcHHHHHHH-hCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEe
Confidence 568999999999999999975 223468999999999999999999999 69999999999999998 78999999
Q ss_pred CCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ +.. +.++|||||||++|||++|.
T Consensus 208 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 260 (400)
T 1nxk_A 208 FGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 260 (400)
T ss_dssp CTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSS
T ss_pred cccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCC
Confidence 9999865432110 233 88999999999999999984
No 137
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=7.6e-30 Score=286.51 Aligned_cols=274 Identities=14% Similarity=0.028 Sum_probs=174.6
Q ss_pred CCCCCCCCCCCCCCCCCCcccEEeCC------------------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCcc
Q 006570 49 VLQGWTDWTNFCYLPSSSSLKIVCTN------------------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSAN 110 (640)
Q Consensus 49 ~l~~W~~~~~~C~~~~~~~~gv~C~~------------------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n 110 (640)
.+++|..+.+||.. ...|.++.|+. ..+..++++++.++. +++..+...+.|+.|+|++|
T Consensus 8 ~l~~~~~~~~C~~~-~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~-lp~~~~~~l~~L~~L~L~~n 85 (597)
T 3oja_B 8 NVKPRQPEYKCIDS-NLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDL 85 (597)
T ss_dssp ---CCCSEECCCCC---CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESE-ECTHHHHHCCCCSEEECTTS
T ss_pred cccCCCCCCcCccc-CcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCC-cCHHHHccCCCCcEEECCCC
Confidence 46788876666641 11233444431 234667777766532 22111222468899999999
Q ss_pred CCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC
Q 006570 111 FNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD 190 (640)
Q Consensus 111 ~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 190 (640)
.+.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.|++..|..|+++++|++|+|++|.+++.+|.
T Consensus 86 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 165 (597)
T 3oja_B 86 QIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDD 165 (597)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred CCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChh
Confidence 99888888999999999999999999888888889999999999999999955555578999999999999999998886
Q ss_pred -ccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccc-------------------cC------------------
Q 006570 191 -LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRS-------------------EI------------------ 232 (640)
Q Consensus 191 -~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~-------------------~~------------------ 232 (640)
|..+++|++|+|++|.+++..+..+++|+.|++++|.+++ ..
T Consensus 166 ~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~ 245 (597)
T 3oja_B 166 TFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLT 245 (597)
T ss_dssp TTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCC
T ss_pred hhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCC
Confidence 8899999999999999887554444444443333333332 11
Q ss_pred -CccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCC
Q 006570 233 -PSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSN 311 (640)
Q Consensus 233 -p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~ 311 (640)
+..+..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+
T Consensus 246 ~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l 323 (597)
T 3oja_B 246 DTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQF 323 (597)
T ss_dssp CCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHH
T ss_pred CChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccC
Confidence 2334445555555555555555555555555555555555555544 3444444555555555555554 344444445
Q ss_pred CCCceeeeccccccC
Q 006570 312 SLNRTVVSTWNCLSG 326 (640)
Q Consensus 312 ~~l~~l~l~~N~l~~ 326 (640)
++|+.|++++|.+++
T Consensus 324 ~~L~~L~L~~N~l~~ 338 (597)
T 3oja_B 324 DRLENLYLDHNSIVT 338 (597)
T ss_dssp TTCSEEECCSSCCCC
T ss_pred CCCCEEECCCCCCCC
Confidence 555555555555544
No 138
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.96 E-value=1.8e-30 Score=263.35 Aligned_cols=184 Identities=23% Similarity=0.370 Sum_probs=152.3
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccC-----
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD----- 522 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~----- 522 (640)
...+|+..+.||+|+||.||+|+.. +++.||+|+++... +.+.+|++++++++||||+++++++.....+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3456888999999999999999964 78999999997543 4678999999999999999999987531110
Q ss_pred ---CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc
Q 006570 523 ---HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 523 ---~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~ 599 (640)
........++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||++++++.
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCC
Confidence 001234589999999999999999752 23568999999999999999999999 69999999999999999999
Q ss_pred eEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++........ +.. +.++||||||+++|||++|+
T Consensus 161 ~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~ 218 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVC 218 (284)
T ss_dssp EEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCC
T ss_pred EEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcC
Confidence 999999998765432111 333 88999999999999999985
No 139
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.6e-30 Score=270.48 Aligned_cols=187 Identities=19% Similarity=0.302 Sum_probs=155.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~ 527 (640)
..+|+..+.||+|+||.||+|+. .+++.||||++........+.+.+|+.++.++. ||||+++++++...........
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 34688899999999999999995 568999999987554444577899999999996 9999999999865444333455
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCC--eeccCCCCCceeecCCCceEEeCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG--IFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
...++||||++ |+|.+++........+++..++.++.|++.||+|||+ .+ |+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecC
Confidence 67899999996 6999999764455679999999999999999999998 57 999999999999999999999999
Q ss_pred CCCccccCCCC----------------------c----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT----------------------L----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~----------------------~----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... + +.. +.++|||||||++|||+||.
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~ 250 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ 250 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSS
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCC
Confidence 99976532110 0 122 67999999999999999984
No 140
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.96 E-value=1e-30 Score=265.10 Aligned_cols=176 Identities=17% Similarity=0.289 Sum_probs=140.5
Q ss_pred hcCCCCCCccccCCccceEEEEeCC----CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|+..+.||+|+||.||+|+... +..||+|.++.... ...+.+.+|+.++++++||||+++++++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------- 86 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------- 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-------
Confidence 4578888999999999999998532 45799999875322 23467899999999999999999999873
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
....++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 87 --~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~D 159 (281)
T 1mp8_A 87 --ENPVWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGD 159 (281)
T ss_dssp --SSSCEEEEECCTTEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC
T ss_pred --cCccEEEEecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECc
Confidence 2347999999999999999975 23468999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 605 YNIPLPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 605 fGla~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||+++....... + ... +.++|||||||++|||++ |
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g 214 (281)
T 1mp8_A 160 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 214 (281)
T ss_dssp -------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTS
T ss_pred cccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcC
Confidence 999976543211 1 233 789999999999999997 5
No 141
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.96 E-value=1.7e-30 Score=278.93 Aligned_cols=178 Identities=19% Similarity=0.285 Sum_probs=146.5
Q ss_pred HHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--------CChHHHHHHHHHHhcCCCcccceeeeEEEe
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--------HLPQSLMQHVELLSKLRHRHLVSILGHCIL 518 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 518 (640)
...++|...+.||+|+||+||+|+. .+++.||||++..... .....+.+|+++|++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 3467899999999999999999984 5689999999975321 12235889999999999999999999873
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA- 597 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~- 597 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.+
T Consensus 211 --------~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~ 276 (419)
T 3i6u_A 211 --------AEDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQE 276 (419)
T ss_dssp --------SSEEEEEEECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSS
T ss_pred --------cCceEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCC
Confidence 2347999999999999999864 4568999999999999999999998 699999999999999754
Q ss_pred --CceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 598 --LTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 598 --~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.+||+|||+++........ ... +.++|||||||++|||+||.
T Consensus 277 ~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~ 341 (419)
T 3i6u_A 277 EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 341 (419)
T ss_dssp SSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSS
T ss_pred CcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCC
Confidence 45999999999876432210 122 67999999999999999984
No 142
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.96 E-value=3.3e-31 Score=271.48 Aligned_cols=177 Identities=22% Similarity=0.353 Sum_probs=134.7
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhc--CCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSK--LRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|...+.||+|+||.||+|+.. ++.||||++... ..+++.+|.+++.. ++||||+++++++..... ...
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~----~~~ 74 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG----TWT 74 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECS----SSE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCC----ccc
Confidence 57899999999999999999874 889999998643 35678888888888 799999999999864221 223
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC-----CCCeeccCCCCCceeecCCCceEEe
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV-----APGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
..++||||+++|+|.++++. ..+++..++.++.|++.||+|||... ..+|+||||||+|||++.++.+||+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 150 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHH----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BC
T ss_pred eeEEEEeccCCCCHHHHHhc----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEe
Confidence 68999999999999999964 35788889999999999999999210 1799999999999999999999999
Q ss_pred CCCCCccccCCCC------------c---------cC------C-CCccceehhhHHHHHHhhc
Q 006570 604 GYNIPLPSKVRNT------------L---------SF------H-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 604 DfGla~~~~~~~~------------~---------~~------~-~~~~DvwS~Gvvl~elltG 639 (640)
|||+++....... . +. . +.++|||||||++|||+||
T Consensus 151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g 214 (303)
T 3gxj_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGG
T ss_pred ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhc
Confidence 9999965432211 0 11 2 3689999999999999998
No 143
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.96 E-value=8.4e-31 Score=269.93 Aligned_cols=175 Identities=19% Similarity=0.219 Sum_probs=143.6
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCC--ChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRH--LPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||+||+|+.. +|+.||||++...... ...++..|+..+.++ +||||+++++++. .
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~--------~ 128 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE--------E 128 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------E
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE--------e
Confidence 56888999999999999999964 7999999998653322 223455566555555 8999999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...++||||+ +|+|.+++... ...++|..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 129 ~~~~~lv~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 129 GGILYLQTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCT
T ss_pred CCEEEEEEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccce
Confidence 45689999999 67999998753 3469999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhc
Q 006570 607 IPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 607 la~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
+++........ ... +.++|||||||++|||++|
T Consensus 203 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g 251 (311)
T 3p1a_A 203 LLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACN 251 (311)
T ss_dssp TCEECC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHT
T ss_pred eeeecccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhC
Confidence 98765332111 224 8899999999999999998
No 144
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.96 E-value=2.6e-30 Score=266.10 Aligned_cols=176 Identities=19% Similarity=0.248 Sum_probs=149.4
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.||+|+||+||+|+. .+|+.||||++...... ..+.+.+|++++++++||||+++++++. ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~ 74 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR--------RK 74 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------ET
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheee--------cC
Confidence 5788899999999999999995 45899999998654322 2456889999999999999999999985 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 75 ~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 148 (311)
T 4agu_A 75 RRLHLVFEYCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGF 148 (311)
T ss_dssp TEEEEEEECCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CeEEEEEEeCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCC
Confidence 568999999999999998864 4568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc-----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ + .. +.++|||||||++|||+||.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 200 (311)
T 4agu_A 149 ARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV 200 (311)
T ss_dssp CEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred chhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCC
Confidence 9765422110 2 34 88999999999999999984
No 145
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.96 E-value=1.4e-30 Score=274.32 Aligned_cols=181 Identities=13% Similarity=0.160 Sum_probs=145.3
Q ss_pred hcCCCCCCccccCCccceEEEEeCC------CcEEEEEEeecccCC-----------ChHHHHHHHHHHhcCCCccccee
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTD------GSRVSVKCLKLKQRH-----------LPQSLMQHVELLSKLRHRHLVSI 512 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l 512 (640)
.++|++.+.||+|+||.||+|+... ++.||||++...... ....+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578889999999999999998654 478999998754311 11234456667778889999999
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCce
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI 592 (640)
++++..... .....++||||+ +|+|.+++.. ....+++..++.|+.|++.||+|||+ .+|+||||||+||
T Consensus 114 ~~~~~~~~~----~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Ni 183 (364)
T 3op5_A 114 WGSGLHDKN----GKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNL 183 (364)
T ss_dssp EEEEEEEET----TEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGE
T ss_pred EeeeeeccC----CcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHE
Confidence 999874321 235689999999 9999999975 34569999999999999999999999 6999999999999
Q ss_pred eec--CCCceEEeCCCCCccccCC---------------CCc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 593 LLD--KALTAKLSGYNIPLPSKVR---------------NTL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 593 Ll~--~~~~~kl~DfGla~~~~~~---------------~~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++ .++.+||+|||+++..... .+. +.. +.++|||||||++|||+||.
T Consensus 184 ll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 258 (364)
T 3op5_A 184 LLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGH 258 (364)
T ss_dssp EEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred EEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 999 8899999999999754321 110 333 88999999999999999984
No 146
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.96 E-value=1.3e-30 Score=261.95 Aligned_cols=175 Identities=18% Similarity=0.366 Sum_probs=151.1
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
++|+..+.||+|+||.||+|+..+++.||+|++.... ...+++.+|++++++++||||+++++++. .....
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~~~ 78 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCL--------EQAPI 78 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEEC--------SSSSC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEc--------cCCCe
Confidence 4677889999999999999998888899999998543 34578999999999999999999999885 33458
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 79 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 153 (267)
T 3t9t_A 79 CLVTEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRF 153 (267)
T ss_dssp EEEECCCTTCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGG
T ss_pred EEEEeCCCCCcHHHHHhh--CcccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccc
Confidence 999999999999999975 23568999999999999999999999 6999999999999999999999999999976
Q ss_pred ccCCC------C-----c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 611 SKVRN------T-----L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 611 ~~~~~------~-----~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
..... . . +.. +.++||||||+++|||++ |
T Consensus 154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g 202 (267)
T 3t9t_A 154 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 202 (267)
T ss_dssp BCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred cccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccC
Confidence 53211 0 0 233 889999999999999999 5
No 147
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=3.5e-30 Score=273.28 Aligned_cols=186 Identities=19% Similarity=0.290 Sum_probs=146.8
Q ss_pred HHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCC--
Q 006570 447 EEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH-- 523 (640)
Q Consensus 447 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~-- 523 (640)
+...++|+..+.||+|+||+||+|+. .+|+.||||++..... ...+|+++++.++||||+++++++.......
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999984 6789999999875432 2347999999999999999999986432210
Q ss_pred ----------------------------CCCCCeEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhc
Q 006570 524 ----------------------------PNTGSTVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFL 574 (640)
Q Consensus 524 ----------------------------~~~~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yL 574 (640)
.......++||||++ |+|.+.+... .....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 023455889999998 5888887642 2356799999999999999999999
Q ss_pred ccCCCCCeeccCCCCCceeec-CCCceEEeCCCCCccccCCCCc----------------c-CC-CCccceehhhHHHHH
Q 006570 575 HTGVAPGIFGNNLKTENILLD-KALTAKLSGYNIPLPSKVRNTL----------------S-FH-TDRSSLYKIILIICV 635 (640)
Q Consensus 575 H~~~~~~iiHrDlk~~NILl~-~~~~~kl~DfGla~~~~~~~~~----------------~-~~-~~~~DvwS~Gvvl~e 635 (640)
|+ .+|+||||||+||+++ +++.+||+|||+++........ + .. +.++||||+||++||
T Consensus 158 H~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 158 HS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp HT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred HH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 98 7999999999999998 6899999999999865322111 2 33 889999999999999
Q ss_pred HhhcC
Q 006570 636 ITLCC 640 (640)
Q Consensus 636 lltG~ 640 (640)
|++|.
T Consensus 235 ll~g~ 239 (383)
T 3eb0_A 235 LILGK 239 (383)
T ss_dssp HHHSS
T ss_pred HHhCC
Confidence 99984
No 148
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.96 E-value=6e-30 Score=268.18 Aligned_cols=184 Identities=16% Similarity=0.326 Sum_probs=149.3
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++...........
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788899999999999999995 578999999986543 2335678899999999999999999999864321111124
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++ +|.+.+.. ....+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEeccCC-CHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 568999999975 88888764 33568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCC------------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN------------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~------------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++...... + + + .. +.++|||||||++|||+||.
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 226 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS 226 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCC
Confidence 97543110 0 0 2 33 88999999999999999984
No 149
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.96 E-value=4.7e-30 Score=260.60 Aligned_cols=176 Identities=15% Similarity=0.268 Sum_probs=151.2
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++++. .
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~ 85 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH--------D 85 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------C
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE--------c
Confidence 56888999999999999999954 5789999999653 2334578999999999999999999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg 159 (284)
T 2vgo_A 86 RKRIYLMLEFAPRGELYKELQK---HGRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFG 159 (284)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCT
T ss_pred CCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEeccc
Confidence 4568999999999999999975 2458999999999999999999998 699999999999999999999999999
Q ss_pred CCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++......... +.. +.++||||||+++|||++|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 209 (284)
T 2vgo_A 160 WSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209 (284)
T ss_dssp TCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred ccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCC
Confidence 98654322111 233 88999999999999999984
No 150
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.96 E-value=3.7e-30 Score=259.08 Aligned_cols=179 Identities=18% Similarity=0.350 Sum_probs=148.4
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||.||+|+.. ++.||||+++.... ...+.+.+|++++++++||||+++++++... ...
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~ 82 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP------PAP 82 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT------TSS
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC------CCC
Confidence 56888899999999999999985 88999999976432 2346799999999999999999999988521 235
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCC--eeccCCCCCceeecCCCceEEeCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG--IFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
..++||||+++|+|.++++. .....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~ 158 (271)
T 3kmu_A 83 HPTLITHWMPYGSLYNVLHE-GTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMAD 158 (271)
T ss_dssp SCEEEEECCTTCBHHHHHHS-CSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGG
T ss_pred CeEeeecccCCCcHHHHHhh-cccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEecc
Confidence 67999999999999999975 223468999999999999999999998 57 9999999999999999999999888
Q ss_pred CCccccCCCCc------------cCC----CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL------------SFH----TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~------------~~~----~~~~DvwS~Gvvl~elltG~ 640 (640)
++......... +.. +.++|||||||++|||+||.
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 208 (271)
T 3kmu_A 159 VKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTRE 208 (271)
T ss_dssp SCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCS
T ss_pred ceeeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 87554322211 211 33799999999999999984
No 151
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.96 E-value=2e-30 Score=268.95 Aligned_cols=179 Identities=20% Similarity=0.322 Sum_probs=151.2
Q ss_pred cCCCCCCccccCCccceEEEEe-----CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-----TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 114 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA------ 114 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec------
Confidence 5678889999999999999983 35889999999865544557899999999999999999999988531
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 115 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Df 189 (326)
T 2w1i_A 115 GRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDF 189 (326)
T ss_dssp ---CCEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCC
T ss_pred CCCceEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecC
Confidence 233579999999999999999752 3458999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++||||||+++|||+||.
T Consensus 190 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~ 245 (326)
T 2w1i_A 190 GLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 245 (326)
T ss_dssp TTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTT
T ss_pred cchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcC
Confidence 99976543211 0 223 78999999999999999973
No 152
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.96 E-value=4.3e-30 Score=288.29 Aligned_cols=169 Identities=19% Similarity=0.346 Sum_probs=144.4
Q ss_pred ccccCCccceEEEEeC---CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEEEE
Q 006570 458 LIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLV 533 (640)
Q Consensus 458 ~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~lv 533 (640)
.||+|+||.||+|.+. ++..||||+++... ....+++.+|+++|++++||||++++++|.. +..++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~---------~~~~lv 413 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---------EALMLV 413 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES---------SSEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc---------CCeEEE
Confidence 7999999999999853 45679999998643 3356889999999999999999999999851 348999
Q ss_pred EEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccccC
Q 006570 534 LEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKV 613 (640)
Q Consensus 534 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~ 613 (640)
||||++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 414 ~E~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp EECCTTCBHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EEeCCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 999999999999964 34568999999999999999999999 6999999999999999999999999999987532
Q ss_pred CCC-------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 614 RNT-------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 614 ~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
... . ... +.++|||||||++|||+| |.
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~ 537 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 537 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 211 1 234 889999999999999998 63
No 153
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.96 E-value=4e-30 Score=261.42 Aligned_cols=165 Identities=12% Similarity=0.042 Sum_probs=142.9
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCC---hHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHL---PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|++.+.||+|+||.||+|+.. +++.||||++....... .+.+.+|++.+++++||||+++++++. .
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~--------~ 102 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH--------T 102 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--------E
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE--------E
Confidence 56888999999999999999954 58999999998654322 367899999999999999999999985 2
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
.+..|+||||+++|+|.++++. . ....++.+|+.|++.||+|||+ .+|+||||||+|||++.++.+||+++|
T Consensus 103 ~~~~~lv~e~~~g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~ 174 (286)
T 3uqc_A 103 RAGGLVVAEWIRGGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA 174 (286)
T ss_dssp TTEEEEEEECCCEEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred CCcEEEEEEecCCCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc
Confidence 3568999999999999999953 1 3566789999999999999999 699999999999999999999999877
Q ss_pred CCccccCCCCccCCCCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTLSFHTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~~~~~~~~DvwS~Gvvl~elltG~ 640 (640)
... ..+.++|||||||++|||+||.
T Consensus 175 ~~~---------~~~~~~Di~slG~il~elltg~ 199 (286)
T 3uqc_A 175 TMP---------DANPQDDIRGIGASLYALLVNR 199 (286)
T ss_dssp CCT---------TCCHHHHHHHHHHHHHHHHHSE
T ss_pred ccC---------CCCchhHHHHHHHHHHHHHHCC
Confidence 642 2288999999999999999984
No 154
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.96 E-value=2e-30 Score=263.76 Aligned_cols=178 Identities=16% Similarity=0.331 Sum_probs=152.9
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
..++|+..+.||+|+||.||+|+.. ++..||+|++... ....+.+.+|++++++++||||+++++++. ..
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------~~ 81 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--------RE 81 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEEC--------SS
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEc--------cC
Confidence 4567888899999999999999964 4889999999753 234578999999999999999999999884 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 82 ~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~ 157 (288)
T 3kfa_A 82 PPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGL 157 (288)
T ss_dssp SSEEEEEECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred CCEEEEEEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCcc
Confidence 5689999999999999999762 34568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc------------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 608 PLPSKVRNTL------------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 608 a~~~~~~~~~------------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+......... +.. +.++||||||+++|||++ |
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g 209 (288)
T 3kfa_A 158 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209 (288)
T ss_dssp GGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred ceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 9866433211 233 889999999999999998 5
No 155
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=8e-31 Score=275.24 Aligned_cols=176 Identities=18% Similarity=0.263 Sum_probs=148.6
Q ss_pred cCCCCCCccccCCccceEEEEe----CCCcEEEEEEeeccc----CCChHHHHHHHHHHhcC-CCcccceeeeEEEeccc
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL----TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 521 (640)
++|+..+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~---- 129 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ---- 129 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE----
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe----
Confidence 5688899999999999999986 368999999986432 23456778899999999 6999999999885
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|
T Consensus 130 ----~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~k 199 (355)
T 1vzo_A 130 ----TETKLHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVV 199 (355)
T ss_dssp ----ETTEEEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEE
T ss_pred ----eCceEEEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEE
Confidence 34568999999999999999975 3458999999999999999999998 6999999999999999999999
Q ss_pred EeCCCCCccccCCCC-----------c-------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRNT-----------L-------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~~-----------~-------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||+++....... + + .. +.++|||||||++|||+||.
T Consensus 200 l~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~ 259 (355)
T 1vzo_A 200 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 259 (355)
T ss_dssp ESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSS
T ss_pred EeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCC
Confidence 999999875422110 0 1 22 78999999999999999984
No 156
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.96 E-value=1.9e-30 Score=267.15 Aligned_cols=180 Identities=21% Similarity=0.334 Sum_probs=151.1
Q ss_pred HhcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEecc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILTY 520 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~ 520 (640)
..++|+..+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~--- 97 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT--- 97 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe---
Confidence 346788889999999999999984 3467899999975432 2346789999999999 9999999999885
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCC---------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeecc
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKK---------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGN 585 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHr 585 (640)
.+...++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+|+||
T Consensus 98 -----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~ 169 (313)
T 1t46_A 98 -----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHR 169 (313)
T ss_dssp -----SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCS
T ss_pred -----cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecC
Confidence 34457999999999999999975322 2258999999999999999999999 699999
Q ss_pred CCCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 586 NLKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 586 Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||||+||+++.++.+||+|||+++....... . +.. +.++||||||+++|||+| |
T Consensus 170 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 244 (313)
T 1t46_A 170 DLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 244 (313)
T ss_dssp CCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999986643321 1 233 889999999999999998 5
No 157
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=6.7e-30 Score=268.04 Aligned_cols=259 Identities=18% Similarity=0.114 Sum_probs=198.1
Q ss_pred CCCCCCCCCCCCCCCcccEEeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeec
Q 006570 52 GWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSL 131 (640)
Q Consensus 52 ~W~~~~~~C~~~~~~~~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L 131 (640)
.|.....+|.|. ++ |+ +++++++.. |......++.|+|++|.+.+..+..|.++++|++|+|
T Consensus 22 ~~~~~~~~C~~~-----~~-c~--------~~~~~l~~i----P~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L 83 (353)
T 2z80_A 22 SSNQASLSCDRN-----GI-CK--------GSSGSLNSI----PSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVL 83 (353)
T ss_dssp -----CCEECTT-----SE-EE--------CCSTTCSSC----CTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCccCCCCCCC-----eE-ee--------CCCCCcccc----cccccccCcEEECCCCcCcccCHHHhccCCCCCEEEC
Confidence 354456778886 34 53 344444322 1112257888999999887776678899999999999
Q ss_pred ccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCC--CccCcCcCCeeEccCCC-CC
Q 006570 132 VSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGND-FG 208 (640)
Q Consensus 132 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~-l~ 208 (640)
++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++.++ .+.++++|++|++++|+ ++
T Consensus 84 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~ 163 (353)
T 2z80_A 84 TSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT 163 (353)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC
T ss_pred CCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc
Confidence 9999988778889999999999999999985444448889999999999999988777 38889999999999884 55
Q ss_pred CCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCcc------
Q 006570 209 PKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA------ 279 (640)
Q Consensus 209 ~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~------ 279 (640)
...+.. +++|+.|++++|++++..|..+.++++|++|++++|+++...+..+..+++|+.|++++|++++.
T Consensus 164 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 243 (353)
T 2z80_A 164 KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELS 243 (353)
T ss_dssp EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---
T ss_pred ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccc
Confidence 554443 67888899999999888888899999999999999998754444455688899999999988774
Q ss_pred -------------------------CCccccCCCCCCEEeccCccCcccCCCC-ccCCCCCceeeeccccccCccC
Q 006570 280 -------------------------LPVNISCSAKLNFVEISHNLLIGKLPSC-IGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 280 -------------------------~p~~~~~~~~L~~L~ls~N~l~~~~p~~-~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
+|..+..+++|+.|++++|+++ .+|.. +..+++|+.+++++|.+++..+
T Consensus 244 ~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 244 TGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp ---CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 3444667889999999999998 45555 5889999999999998887543
No 158
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.96 E-value=2.3e-30 Score=269.40 Aligned_cols=179 Identities=18% Similarity=0.377 Sum_probs=148.3
Q ss_pred hcCCCCCCccccCCccceEEEEe--------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEec
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL--------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 519 (640)
.++|+..+.||+|+||.||+|+. .++..||||+++.... ...+++.+|+++++++ +||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-- 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc--
Confidence 46788899999999999999985 2467899999975432 2346789999999999 8999999999884
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
.....++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+|+|||
T Consensus 112 ------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~D 182 (334)
T 2pvf_A 112 ------QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRD 182 (334)
T ss_dssp ------SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred ------cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCC
Confidence 34568999999999999999975321 2348999999999999999999999 6999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|||+||+++.++.+||+|||+++....... + +.. +.++|||||||++|||+| |
T Consensus 183 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 256 (334)
T 2pvf_A 183 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256 (334)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred CccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999976533211 0 233 889999999999999998 5
No 159
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.96 E-value=3.5e-30 Score=268.08 Aligned_cols=180 Identities=25% Similarity=0.425 Sum_probs=143.3
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHH--HhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVEL--LSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+|+. +++.||||++.... .+.+..|.++ +..++||||+++++++..... ...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~---~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTA---DGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECT---TSC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheeccccccc---CCC
Confidence 35788899999999999999987 58999999997432 3455555555 445899999999987653222 234
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC------CCCeeccCCCCCceeecCCCceE
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV------APGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~iiHrDlk~~NILl~~~~~~k 601 (640)
...++||||+++|+|.+++.. ...++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+|
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 567899999999999999964 23589999999999999999999831 12999999999999999999999
Q ss_pred EeCCCCCccccCCC----------------Cc---------c-------CC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRN----------------TL---------S-------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~----------------~~---------~-------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||+++...... +. + .. +.++|||||||++|||+||+
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~ 232 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRC 232 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcC
Confidence 99999997653211 00 1 12 57899999999999999984
No 160
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.96 E-value=1.8e-30 Score=263.68 Aligned_cols=181 Identities=17% Similarity=0.256 Sum_probs=150.0
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC--CChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~ 524 (640)
..++|+..+.||+|+||+||+|+.. +++.||||+++.... ....++.+|+..+..+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~------- 81 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA------- 81 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEE-------
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeee-------
Confidence 3467888999999999999999954 789999999985432 2346788999999999 9999999999985
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC------
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA------ 597 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~------ 597 (640)
.....++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 82 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~ 157 (289)
T 1x8b_A 82 -EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAA 157 (289)
T ss_dssp -ETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC--------
T ss_pred -cCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCccc
Confidence 3456899999999999999997532 12568999999999999999999999 699999999999999844
Q ss_pred -------------CceEEeCCCCCccccCCCCc-------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 598 -------------LTAKLSGYNIPLPSKVRNTL-------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 598 -------------~~~kl~DfGla~~~~~~~~~-------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..+||+|||.+......... +. . +.++|||||||++|||++|.
T Consensus 158 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~ 228 (289)
T 1x8b_A 158 SEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE 228 (289)
T ss_dssp ------------CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccccccccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCC
Confidence 47999999999776433221 22 2 57999999999999999884
No 161
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.96 E-value=3.4e-30 Score=268.32 Aligned_cols=177 Identities=17% Similarity=0.246 Sum_probs=151.4
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..+|...+.||+|+||.||+++.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------- 111 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-------- 111 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--------
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--------
Confidence 356888999999999999999954 578999999975432 23467889999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++++|.+++.. ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 112 DNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCC
T ss_pred cCCeEEEEEecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeec
Confidence 34568999999999999999864 3468999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +.++||||||+++|||++|.
T Consensus 186 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 238 (335)
T 2owb_A 186 GLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238 (335)
T ss_dssp TTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSS
T ss_pred cCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCc
Confidence 999765322110 233 88999999999999999984
No 162
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.96 E-value=5.5e-30 Score=290.15 Aligned_cols=178 Identities=17% Similarity=0.213 Sum_probs=151.3
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~ 523 (640)
..++|+..+.||+|+||.||+|+. .+++.||||+++.. .....+.+..|.+++..+ +||+|+++++++.
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~------ 412 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ------ 412 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB------
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE------
Confidence 456788999999999999999995 46889999999753 234457788999999988 7999999998763
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
+....|+||||+++|+|.++++. ...+++..++.|+.||+.||+|||+ .+||||||||+|||++.++.+||+
T Consensus 413 --~~~~~~lV~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 413 --TMDRLYFVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp --CSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEEC
T ss_pred --eCCEEEEEEeCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEe
Confidence 45678999999999999999975 3458999999999999999999999 799999999999999999999999
Q ss_pred CCCCCccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++....... + +.. +.++|||||||++|||++|.
T Consensus 485 DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~ 539 (674)
T 3pfq_A 485 DFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539 (674)
T ss_dssp CCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSS
T ss_pred ecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCC
Confidence 9999985321110 0 234 89999999999999999984
No 163
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=1e-28 Score=256.60 Aligned_cols=253 Identities=17% Similarity=0.131 Sum_probs=221.7
Q ss_pred cEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCc
Q 006570 69 KIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLW 137 (640)
Q Consensus 69 gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~ 137 (640)
.+.|++ ..++.|+|++|.+++.. +..+...+.|++|+|++|.+.+..|..|.++++|++|+|++|.++
T Consensus 35 ~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 113 (330)
T 1xku_A 35 VVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIK-DGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 113 (330)
T ss_dssp EEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBC-TTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS
T ss_pred EEEecCCCccccCccCCCCCeEEECCCCcCCEeC-hhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC
Confidence 688863 25788999999986543 222445689999999999999988999999999999999999996
Q ss_pred CCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCc--cCCC-ccCcCcCCeeEccCCCCCCCCCCc
Q 006570 138 GPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNG--SVPD-LQRLVLLEELNLGGNDFGPKFPSL 214 (640)
Q Consensus 138 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~-~~~l~~L~~L~L~~N~l~~~~~~~ 214 (640)
.+|..+. ++|++|++++|.+++..+..|.++++|+.|++++|.++. ..+. +.++++|++|++++|+++......
T Consensus 114 -~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~ 190 (330)
T 1xku_A 114 -ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGL 190 (330)
T ss_dssp -BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSC
T ss_pred -ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccc
Confidence 6777665 799999999999997777789999999999999999974 5554 899999999999999998766566
Q ss_pred ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEe
Q 006570 215 SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVE 294 (640)
Q Consensus 215 ~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ 294 (640)
.++|+.|++++|++++..|..|.++++|+.|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|++|+
T Consensus 191 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 269 (330)
T 1xku_A 191 PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269 (330)
T ss_dssp CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEE
Confidence 799999999999999998999999999999999999999888889999999999999999998 5888899999999999
Q ss_pred ccCccCcccCCCCccCC------CCCceeeeccccccC
Q 006570 295 ISHNLLIGKLPSCIGSN------SLNRTVVSTWNCLSG 326 (640)
Q Consensus 295 ls~N~l~~~~p~~~~~~------~~l~~l~l~~N~l~~ 326 (640)
+++|+|++..+..|... ..++.+++++|.+..
T Consensus 270 l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 270 LHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 99999998777777543 678889999998764
No 164
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.96 E-value=5.5e-31 Score=272.50 Aligned_cols=183 Identities=17% Similarity=0.323 Sum_probs=152.2
Q ss_pred HHHHHhcCCCCCCccccCCccceEEEEeC------CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEE
Q 006570 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLT------DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCI 517 (640)
Q Consensus 445 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~ 517 (640)
+++...++|+..+.||+|+||.||+|+.. +++.||||.+..... ....++.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 34445678999999999999999999853 367899999975432 23456889999999999999999999884
Q ss_pred ecccCCCCCCCeEEEEEEccCCCCHhHHhhccC-------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCC
Q 006570 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTE 590 (640)
Q Consensus 518 ~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~ 590 (640)
.+...++||||+++|+|.++++... ....+++..++.++.|++.||+|||+ .+|+||||||+
T Consensus 99 --------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~ 167 (322)
T 1p4o_A 99 --------QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAAR 167 (322)
T ss_dssp --------SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGG
T ss_pred --------cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccc
Confidence 3455799999999999999997522 12457899999999999999999999 69999999999
Q ss_pred ceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh
Q 006570 591 NILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL 638 (640)
Q Consensus 591 NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt 638 (640)
||+++.++.+||+|||+++....... + +.. +.++|||||||++|||+|
T Consensus 168 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 235 (322)
T 1p4o_A 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235 (322)
T ss_dssp GEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHh
Confidence 99999999999999999976532210 0 233 889999999999999999
No 165
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.96 E-value=5.9e-30 Score=259.60 Aligned_cols=176 Identities=22% Similarity=0.325 Sum_probs=149.9
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC------CChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR------HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
++|+..+.||+|+||.||+|+.. +++.||+|.++.... ...+.+.+|++++++++||||+++++++.
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------ 78 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFE------ 78 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE------
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheec------
Confidence 45788899999999999999964 689999999975421 13578999999999999999999999985
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC----c
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL----T 599 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~----~ 599 (640)
.....++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 79 --NKTDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp --CSSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCC
T ss_pred --CCCeEEEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCc
Confidence 34568999999999999999965 3468999999999999999999999 7999999999999998877 8
Q ss_pred eEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||++......... ... +.++||||||+++|||++|.
T Consensus 151 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 208 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 208 (283)
T ss_dssp EEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCC
Confidence 999999999765332110 233 88999999999999999984
No 166
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.96 E-value=4.4e-30 Score=262.17 Aligned_cols=176 Identities=17% Similarity=0.248 Sum_probs=150.6
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|...+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++. .
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------~ 86 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE--------D 86 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--------C
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec--------c
Confidence 56788899999999999999954 588999999975432 23467889999999999999999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++++|.+++.. ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg 160 (294)
T 2rku_A 87 NDFVFVVLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFG 160 (294)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEecc
Confidence 4568999999999999999864 3468999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++||||||+++|||+||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~ 212 (294)
T 2rku_A 161 LATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212 (294)
T ss_dssp TCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSS
T ss_pred CceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 99765321110 233 88999999999999999984
No 167
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.96 E-value=3.1e-30 Score=259.95 Aligned_cols=177 Identities=19% Similarity=0.362 Sum_probs=140.4
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC----CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
++|+..+.||+|+||.||+|+.. ++.||||+++.... ...+.+.+|+++++.++||||+++++++. .
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~ 77 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL--------K 77 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEC--------C
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe--------c
Confidence 56788899999999999999974 88999999875422 23478899999999999999999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC--------CC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK--------AL 598 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~--------~~ 598 (640)
+...++||||+++|+|.+++. ...+++..++.++.|++.||+|||+....+|+||||||+||+++. ++
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~ 153 (271)
T 3dtc_A 78 EPNLCLVMEFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNK 153 (271)
T ss_dssp C--CEEEEECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSC
T ss_pred CCceEEEEEcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCc
Confidence 445799999999999999985 346899999999999999999999932122999999999999986 67
Q ss_pred ceEEeCCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++........ +.. +.++||||||+++|||+||.
T Consensus 154 ~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~ 211 (271)
T 3dtc_A 154 ILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211 (271)
T ss_dssp CEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCC
T ss_pred ceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 8999999999765332211 233 88999999999999999984
No 168
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=4.6e-30 Score=272.87 Aligned_cols=179 Identities=18% Similarity=0.309 Sum_probs=142.1
Q ss_pred HHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCC
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDH 523 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~ 523 (640)
...++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.++.++. ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~----- 80 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA----- 80 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec-----
Confidence 3457899999999999999999984 568999999986432 223466889999999997 9999999999862
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
+.....|+|||||+ |+|.++++. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 81 -~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~ 151 (388)
T 3oz6_A 81 -DNDRDVYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVA 151 (388)
T ss_dssp -TTSSCEEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEEC
T ss_pred -CCCCEEEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEec
Confidence 13346899999997 599999964 368999999999999999999999 799999999999999999999999
Q ss_pred CCCCCccccCC-----------------------------CC--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVR-----------------------------NT--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~-----------------------------~~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++..... .+ + + .. +.++||||+||++|||++|.
T Consensus 152 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~ 228 (388)
T 3oz6_A 152 DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228 (388)
T ss_dssp CCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCC
Confidence 99999754220 00 0 2 33 88999999999999999984
No 169
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=3.3e-30 Score=271.73 Aligned_cols=181 Identities=15% Similarity=0.289 Sum_probs=144.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||++..... ...+++.+|+++++.++||||+++++++.... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~~ 101 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE--TLDD 101 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCS--STTT
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCC--cccc
Confidence 35788899999999999999995 5689999999964322 22467889999999999999999999885321 1112
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||+ +++|.++++. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeee
Confidence 34579999999 7899999964 358999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ + .. +.++||||+||+++||++|.
T Consensus 174 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 223 (367)
T 1cm8_A 174 LARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223 (367)
T ss_dssp TCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSS
T ss_pred cccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCC
Confidence 99875432211 2 34 89999999999999999984
No 170
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.96 E-value=2.9e-30 Score=264.04 Aligned_cols=177 Identities=18% Similarity=0.341 Sum_probs=147.1
Q ss_pred cCCCCCCccccCCccceEEEEeCC----CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..|+..+.||+|+||+||+|+..+ ...||+|.++.... ...+.+.+|++++++++||||+++++++..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 97 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR------- 97 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC-------
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc-------
Confidence 357778999999999999998532 23589999875322 234678999999999999999999998752
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+...++||||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 98 ~~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Df 172 (298)
T 3f66_A 98 SEGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADF 172 (298)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEeCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcc
Confidence 33457999999999999999974 34568999999999999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCC--------------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 606 NIPLPSKVRNT--------------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 606 Gla~~~~~~~~--------------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|+++....... . +.. +.++||||||+++|||++|
T Consensus 173 g~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~ 228 (298)
T 3f66_A 173 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 228 (298)
T ss_dssp GGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhC
Confidence 99976532211 0 233 8899999999999999995
No 171
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.96 E-value=3.9e-30 Score=263.97 Aligned_cols=177 Identities=18% Similarity=0.311 Sum_probs=148.9
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|...+.||+|+||.||+|+. .+|+.||+|+++.......+.+.+|++++++++||||+++++++. ...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 79 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE--------STT 79 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEE--------CSS
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcc--------cCC
Confidence 35688889999999999999995 468999999998654445567899999999999999999999885 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEEeCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKLSGY 605 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~Df 605 (640)
..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||++ ++++.+||+||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Df 153 (304)
T 2jam_A 80 HYYLVMQLVSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDF 153 (304)
T ss_dssp EEEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSC
T ss_pred EEEEEEEcCCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccC
Confidence 68999999999999999965 3458999999999999999999999 699999999999999 78899999999
Q ss_pred CCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +.++|||||||++|||++|.
T Consensus 154 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 204 (304)
T 2jam_A 154 GLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGY 204 (304)
T ss_dssp STTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSS
T ss_pred CcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCC
Confidence 999765432110 233 78999999999999999984
No 172
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=5.5e-31 Score=271.44 Aligned_cols=264 Identities=18% Similarity=0.105 Sum_probs=216.8
Q ss_pred CCCCCCCCCCCCCCCCCcccEEeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCC-CChhhhhhc-------
Q 006570 50 LQGWTDWTNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFN-IDRFFTILT------- 121 (640)
Q Consensus 50 l~~W~~~~~~C~~~~~~~~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~-~~~~~~~l~------- 121 (640)
..+|.....|+.+. ...+.|...+++.+++++|.+ .++ ......++.|+|++|.+ ...+|..+.
T Consensus 21 ~~~~~~~~~c~~~~---~~~~~~~~~~L~~l~l~~n~l--~~p---~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~ 92 (312)
T 1wwl_A 21 KPDWSSAFNCLGAA---DVELYGGGRSLEYLLKRVDTE--ADL---GQFTDIIKSLSLKRLTVRAARIPSRILFGALRVL 92 (312)
T ss_dssp SCCGGGGGGSSSCS---EEEEEEEEEECTTHHHHCCTT--CCC---HHHHHHHHHCCCCEEEEEEEECBHHHHHHHHHHH
T ss_pred ccchHHHhhhhccc---cEEEEccCCCceeEeeccccc--ccH---HHHHHHHhhcccccccccCCCcCHHHHHHHHHhc
Confidence 44675444444443 224667667788888888887 222 11123488999999988 445666665
Q ss_pred CCCCCcEeecccCcCcCCCCccc--cCCCCCCEEEcccCcccccCCccccCC-----CCCCEEEccCccCCccCCC-ccC
Q 006570 122 KLSNLKVLSLVSLGLWGPLPSKI--NRFWSLEVLNISSNFIYGEIPMEITSL-----KNLKSIVLADNLLNGSVPD-LQR 193 (640)
Q Consensus 122 ~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~-~~~ 193 (640)
++++|++|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++.+|. |.+
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 89999999999999999999887 9999999999999999977 8888877 9999999999999999876 999
Q ss_pred cCcCCeeEccCCCCCCCC-------CCcccccceeecccCcccc--cCC-ccccCCCCccEEEccCCcccCcCC-ccccC
Q 006570 194 LVLLEELNLGGNDFGPKF-------PSLSKNIVSVILRNNSLRS--EIP-SGLKNFDQLKQFDISSNNFVGPIQ-SFLFS 262 (640)
Q Consensus 194 l~~L~~L~L~~N~l~~~~-------~~~~~~L~~L~l~~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~ 262 (640)
+++|++|+|++|++.+.. +..+++|++|+|++|++++ .++ ..+.++++|+.|+|++|++++.+| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 999999999999987642 2447899999999999983 223 345688999999999999998775 45677
Q ss_pred CCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 263 LPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 263 l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+++|++|+|++|+|+ .+|..+. ++|+.||+++|+|++. |. +..+++|+.+++++|.+++.
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 899999999999998 5888776 8999999999999976 66 89999999999999999873
No 173
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.96 E-value=5.8e-30 Score=263.38 Aligned_cols=177 Identities=18% Similarity=0.247 Sum_probs=146.0
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCC---hHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHL---PQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|...+.||+|+||.||+|+. .+++.||+|++....... .+.+.+|++++++++||||+++++++.
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-------- 104 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGE-------- 104 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE--------
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe--------
Confidence 46799999999999999999995 468899999997543222 367899999999999999999999986
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 105 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Df 178 (309)
T 2h34_A 105 IDGQLYVDMRLINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDF 178 (309)
T ss_dssp ETTEEEEEEECCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSC
T ss_pred eCCeEEEEEEecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecC
Confidence 24568999999999999999975 3458999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++........ + +.. +.++||||||+++|||+||.
T Consensus 179 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 232 (309)
T 2h34_A 179 GIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS 232 (309)
T ss_dssp CC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSS
T ss_pred ccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCC
Confidence 99876532210 0 233 88999999999999999984
No 174
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.96 E-value=4e-30 Score=261.96 Aligned_cols=175 Identities=22% Similarity=0.352 Sum_probs=140.7
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||+||+|+.. ..||||+++.... ...+.+.+|++++++++||||+++++++. .
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---------~ 91 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST---------A 91 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---------S
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc---------C
Confidence 457888999999999999999864 3699999975432 23467899999999999999999999762 2
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (289)
T 3og7_A 92 PQLAIVTQWCEGSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGL 166 (289)
T ss_dssp SSCEEEEECCCEEEHHHHHTT--C---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-
T ss_pred CccEEEEEecCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEcccee
Confidence 347999999999999999964 34568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCC----------Cc------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN----------TL------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~----------~~------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++...... +. ... +.++||||||+++|||++|.
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 222 (289)
T 3og7_A 167 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222 (289)
T ss_dssp -----------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCC
Confidence 97543211 00 122 66899999999999999984
No 175
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=3.8e-30 Score=269.21 Aligned_cols=179 Identities=21% Similarity=0.345 Sum_probs=143.9
Q ss_pred HHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-----CChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-----HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
...++|+..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---- 82 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG---- 82 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEe----
Confidence 3456899999999999999999995 4689999999975321 12357889999999999999999999884
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
.....++||||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 83 ----~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~k 152 (346)
T 1ua2_A 83 ----HKSNISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLK 152 (346)
T ss_dssp ----CTTCCEEEEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred ----eCCceEEEEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEE
Confidence 34558999999986 89998864 34568899999999999999999999 6999999999999999999999
Q ss_pred EeCCCCCccccCCCCc-----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRNTL-----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~~~-----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||+++........ + .. +.++|||||||++|||++|.
T Consensus 153 l~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 210 (346)
T 1ua2_A 153 LADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 210 (346)
T ss_dssp ECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSS
T ss_pred EEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCC
Confidence 9999999865322110 2 23 78899999999999999984
No 176
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.96 E-value=3e-30 Score=266.31 Aligned_cols=184 Identities=16% Similarity=0.251 Sum_probs=152.0
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|+..+.||+|+||.||+++. .+++.||||++........+.+.+|+++++.++||||+++++++.... ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER----GAKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE----TTEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc----CCCc
Confidence 35688899999999999999995 678999999997654445678999999999999999999999986321 1345
Q ss_pred eEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
..++||||+++|+|.+++... .....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 689999999999999999753 234678999999999999999999999 6999999999999999999999999998
Q ss_pred CccccCCC-----------------C--c----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN-----------------T--L----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~-----------------~--~----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+....... + + ... +.++|||||||++|||++|.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 243 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSS
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCC
Confidence 86542100 0 0 112 77999999999999999984
No 177
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.96 E-value=8.3e-30 Score=258.63 Aligned_cols=177 Identities=19% Similarity=0.311 Sum_probs=150.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+++.||+|++...... ..+.+.+|++++++++||||+++++++. .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~ 76 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ--------E 76 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------C
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE--------c
Confidence 46788899999999999999995 46899999999754322 2367889999999999999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc---eEEe
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT---AKLS 603 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~ 603 (640)
+...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+
T Consensus 77 ~~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~ 150 (284)
T 3kk8_A 77 ESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLA 150 (284)
T ss_dssp SSEEEEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEEC
T ss_pred CCEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEe
Confidence 4568999999999999999865 3458999999999999999999999 69999999999999987655 9999
Q ss_pred CCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||++......... +.. +.++||||||+++|||++|.
T Consensus 151 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~ 204 (284)
T 3kk8_A 151 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 204 (284)
T ss_dssp CCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred eceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCC
Confidence 99999765432211 333 88999999999999999984
No 178
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.96 E-value=6.8e-30 Score=260.26 Aligned_cols=178 Identities=21% Similarity=0.275 Sum_probs=148.8
Q ss_pred CCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
|...+.||+|+||.||+|+. .++..||+|.+..... ...+.+.+|++++++++||||+++++++..... ....
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----~~~~ 103 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK----GKKC 103 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS----SCEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccC----CCce
Confidence 55677899999999999985 5688999999975432 234678999999999999999999998864322 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCC--eeccCCCCCceeec-CCCceEEeCCC
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPG--IFGNNLKTENILLD-KALTAKLSGYN 606 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~--iiHrDlk~~NILl~-~~~~~kl~DfG 606 (640)
.++||||+++|+|.+++.. ...+++..++.++.|++.||+|||+ .+ |+||||||+||+++ +++.+||+|||
T Consensus 104 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred EEEEEEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 8999999999999999975 3458999999999999999999998 56 99999999999998 78999999999
Q ss_pred CCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++......... ... +.++|||||||++|||++|.
T Consensus 178 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~ 226 (290)
T 1t4h_A 178 LATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSE 226 (290)
T ss_dssp GGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CcccccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCC
Confidence 99754332111 223 88999999999999999984
No 179
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.96 E-value=1.7e-30 Score=269.16 Aligned_cols=176 Identities=19% Similarity=0.375 Sum_probs=144.9
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCC-ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRH-LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|...+.||+|+||+||+|+.. +++.||||+++..... ....+.+|++++++++||||+++++++. ...
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~ 73 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH--------TEK 73 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEE--------CSS
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEe--------eCC
Confidence 46888899999999999999954 6899999999754321 2234567999999999999999999985 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||++ |+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 147 (324)
T 3mtl_A 74 SLTLVFEYLD-KDLKQYLDD--CGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLA 147 (324)
T ss_dssp CEEEEEECCS-EEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred EEEEEecccc-cCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCccc
Confidence 6899999997 599999875 24568999999999999999999999 79999999999999999999999999998
Q ss_pred ccccCCCCc-----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL-----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~-----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+........ + .. +.++|||||||++|||++|.
T Consensus 148 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~ 198 (324)
T 3mtl_A 148 RAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198 (324)
T ss_dssp ECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred ccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 754321110 2 33 88999999999999999984
No 180
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.96 E-value=1e-29 Score=267.73 Aligned_cols=183 Identities=23% Similarity=0.406 Sum_probs=154.0
Q ss_pred HHHHHHhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCC--------ChHHHHHHHHHHhcC-CCcccceee
Q 006570 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRH--------LPQSLMQHVELLSKL-RHRHLVSIL 513 (640)
Q Consensus 444 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~l~ 513 (640)
+......++|++.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+++++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344556678999999999999999999964 7999999999754321 135678999999999 799999999
Q ss_pred eEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCcee
Q 006570 514 GHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593 (640)
Q Consensus 514 g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL 593 (640)
+++. .....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+
T Consensus 167 ~~~~--------~~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl 232 (365)
T 2y7j_A 167 DSYE--------SSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENIL 232 (365)
T ss_dssp EEEE--------BSSEEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred EEEe--------eCCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEE
Confidence 9885 34568999999999999999975 3468999999999999999999999 69999999999999
Q ss_pred ecCCCceEEeCCCCCccccCCCCc----------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 594 LDKALTAKLSGYNIPLPSKVRNTL----------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 594 l~~~~~~kl~DfGla~~~~~~~~~----------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++.++.+||+|||++......... ... +.++|||||||++|||+||.
T Consensus 233 ~~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~ 302 (365)
T 2y7j_A 233 LDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGS 302 (365)
T ss_dssp ECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred ECCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCC
Confidence 999999999999998765432111 112 77999999999999999984
No 181
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.96 E-value=1.8e-29 Score=265.30 Aligned_cols=191 Identities=16% Similarity=0.224 Sum_probs=143.8
Q ss_pred HHHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 444 EEIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 444 ~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
++.....++|++.+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++.++.++||||+++++++......
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 45566778999999999999999999995 468999999986543 3345677888889999999999999998753321
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhc-cCCCCCCCHHHHHHHHHHHHHHhhhcc--cCCCCCeeccCCCCCceeecC-CC
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTD-WKKKDMLKWPQRMAIIIGATRGVQFLH--TGVAPGIFGNNLKTENILLDK-AL 598 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH--~~~~~~iiHrDlk~~NILl~~-~~ 598 (640)
. ......++||||+++ +|.+.+.. ......+++..+..++.|++.||+||| + .+|+||||||+|||++. ++
T Consensus 95 ~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 95 D-RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp C-TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTT
T ss_pred c-ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCC
Confidence 1 233457899999986 55554432 234567899999999999999999999 6 79999999999999997 89
Q ss_pred ceEEeCCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++........ ... +.++|||||||++|||+||.
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~ 229 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229 (360)
T ss_dssp EEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred cEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999999999865432211 233 88999999999999999984
No 182
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.96 E-value=1.1e-29 Score=263.74 Aligned_cols=172 Identities=15% Similarity=0.285 Sum_probs=147.9
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||+||+|+ ..+++.||||+++. ...+.+.+|++++++++ ||||+++++++... ...
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~------~~~ 106 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDP------VSR 106 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECT------TTC
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccC------CCC
Confidence 568889999999999999998 46789999999873 34578999999999997 99999999988631 245
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC-ceEEeCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL-TAKLSGYNI 607 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~-~~kl~DfGl 607 (640)
..++||||+++++|.++++. +++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+
T Consensus 107 ~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~ 177 (330)
T 3nsz_A 107 TPALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGL 177 (330)
T ss_dssp CEEEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred ceEEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCC
Confidence 68999999999999999853 7899999999999999999999 7999999999999999776 899999999
Q ss_pred CccccCCCCc----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ + .. +.++|||||||++|||++|.
T Consensus 178 a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~ 228 (330)
T 3nsz_A 178 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 228 (330)
T ss_dssp CEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred ceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCC
Confidence 9765332211 2 33 88999999999999999984
No 183
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=8e-30 Score=265.34 Aligned_cols=181 Identities=22% Similarity=0.359 Sum_probs=144.8
Q ss_pred HHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcC--CCcccceeeeEEEecccCCC
Q 006570 447 EEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL--RHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 447 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~g~~~~~~~~~~ 524 (640)
....++|++.+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++... +||||+++++++.....
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~--- 105 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTG--- 105 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG---
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC---
Confidence 344568999999999999999999975 8999999986432 34556666666655 89999999999864221
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC-----CCCeeccCCCCCceeecCCCc
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV-----APGIFGNNLKTENILLDKALT 599 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlk~~NILl~~~~~ 599 (640)
.....++||||+++|+|.++++. ..+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.
T Consensus 106 -~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 106 -SWTQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp -GGCEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred -CCCceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 22568999999999999999964 35899999999999999999999821 129999999999999999999
Q ss_pred eEEeCCCCCccccCCC------------Cc---------cCC-CC------ccceehhhHHHHHHhhc
Q 006570 600 AKLSGYNIPLPSKVRN------------TL---------SFH-TD------RSSLYKIILIICVITLC 639 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~------------~~---------~~~-~~------~~DvwS~Gvvl~elltG 639 (640)
+||+|||+++...... +. +.. .. ++|||||||++|||+||
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence 9999999996542211 00 111 22 48999999999999998
No 184
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.96 E-value=5.3e-30 Score=264.82 Aligned_cols=175 Identities=22% Similarity=0.376 Sum_probs=148.3
Q ss_pred CCCCCccccCCccceEEEEeC-----CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLT-----DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
|+..+.||+|+||+||++.+. +++.||||+++.... ...+.+.+|++++++++||||+++++++... .
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~ 106 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA------G 106 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET------T
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC------C
Confidence 377899999999999888642 578999999975432 2346789999999999999999999998632 2
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++|+|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg 179 (318)
T 3lxp_A 107 AASLQLVMEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFG 179 (318)
T ss_dssp TTEEEEEECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGG
T ss_pred CceEEEEEecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcc
Confidence 4568999999999999999964 248999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||+||+
T Consensus 180 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~ 234 (318)
T 3lxp_A 180 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC 234 (318)
T ss_dssp GCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred ccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99865432210 223 77899999999999999984
No 185
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.96 E-value=1.3e-29 Score=259.76 Aligned_cols=175 Identities=18% Similarity=0.314 Sum_probs=151.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
+.|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++. ...
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 93 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL--------KDT 93 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEE--------ETT
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEe--------cCC
Confidence 5688889999999999999984 568999999997543 334578999999999999999999999886 234
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~ 166 (303)
T 3a7i_A 94 KLWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVA 166 (303)
T ss_dssp EEEEEEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccc
Confidence 68999999999999999953 468999999999999999999999 69999999999999999999999999999
Q ss_pred ccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
......... +.. +.++||||||+++|||++|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 216 (303)
T 3a7i_A 167 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216 (303)
T ss_dssp EECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred eecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCC
Confidence 765332110 233 88999999999999999984
No 186
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.96 E-value=4.7e-30 Score=268.12 Aligned_cols=174 Identities=19% Similarity=0.287 Sum_probs=145.5
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCC--cccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRH--RHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~~~~~~~~ 526 (640)
+.|++.+.||+|+||.||+|...+++.||||++...... ..+.+.+|++++++++| |||+++++++. .
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~--------~ 80 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI--------T 80 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE--------C
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe--------e
Confidence 468888999999999999999888999999999754322 23678999999999976 99999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+...++|||| .+|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++ ++.+||+|||
T Consensus 81 ~~~~~lv~e~-~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG 152 (343)
T 3dbq_A 81 DQYIYMVMEC-GNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFG 152 (343)
T ss_dssp SSEEEEEECC-CSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred CCEEEEEEeC-CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecc
Confidence 4578999995 57899999975 4568999999999999999999999 6999999999999997 5789999999
Q ss_pred CCccccCCCC----------c---------c-----------CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT----------L---------S-----------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~----------~---------~-----------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++....... . + .. +.++|||||||++|||++|.
T Consensus 153 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~ 217 (343)
T 3dbq_A 153 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217 (343)
T ss_dssp SSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSS
T ss_pred cccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCC
Confidence 9976532211 0 1 23 77899999999999999984
No 187
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.96 E-value=2.5e-29 Score=267.41 Aligned_cols=246 Identities=15% Similarity=0.072 Sum_probs=179.8
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
.++.++++++.++. ++...+...+.|+.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 46 ~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 46 NQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCSEEEEESCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEecCCchhh-CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 46678888776632 22211223478999999999998887889999999999999999998888888999999999999
Q ss_pred ccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCcccccceee------------
Q 006570 156 SSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI------------ 222 (640)
Q Consensus 156 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~------------ 222 (640)
++|.++...+..|.++++|++|+|++|.+++.+|. +..+++|++|+|++|++++.....+++|+.|+
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~ 204 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIP 204 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECC
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCC
Confidence 99999944444468999999999999999998886 89999999999999999865444444444444
Q ss_pred -------cccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEec
Q 006570 223 -------LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295 (640)
Q Consensus 223 -------l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l 295 (640)
+++|.++.. |.. ..++|+.|+|++|++++. ..+..+++|++|+|++|++++..|..+..+++|+.|++
T Consensus 205 ~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (390)
T 3o6n_A 205 IAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYI 279 (390)
T ss_dssp SSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEEC
T ss_pred CcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEEC
Confidence 444444322 211 134677777777777653 45677777777777777777766777777777777777
Q ss_pred cCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 296 SHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 296 s~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
++|++++ +|..+..+++|+.|++++|.+++.+
T Consensus 280 ~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~~~ 311 (390)
T 3o6n_A 280 SNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVE 311 (390)
T ss_dssp CSSCCCE-EECSSSCCTTCCEEECCSSCCCCCG
T ss_pred CCCcCcc-cCcccCCCCCCCEEECCCCcceecC
Confidence 7777764 4555566777777777777776543
No 188
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.96 E-value=2.4e-30 Score=268.66 Aligned_cols=177 Identities=19% Similarity=0.391 Sum_probs=144.2
Q ss_pred HhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|+..+.||+|+||+||+|+ ..+++.||||+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------- 103 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIH-------- 103 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEE--------
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEe--------
Confidence 45679999999999999999998 45789999999975432 23456789999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee-----cCCCce
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL-----DKALTA 600 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl-----~~~~~~ 600 (640)
.....++||||+++ +|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+ ++++.+
T Consensus 104 ~~~~~~lv~e~~~~-~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~ 176 (329)
T 3gbz_A 104 HNHRLHLIFEYAEN-DLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVL 176 (329)
T ss_dssp ETTEEEEEEECCSE-EHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEE
T ss_pred cCCEEEEEEecCCC-CHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceE
Confidence 34568999999984 99999975 3458999999999999999999999 699999999999999 455669
Q ss_pred EEeCCCCCccccCCCC----------c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNT----------L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~----------~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||+++....... + + .. +.++|||||||++|||++|.
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 235 (329)
T 3gbz_A 177 KIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235 (329)
T ss_dssp EECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 9999999875432110 0 2 33 89999999999999999984
No 189
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.96 E-value=7.5e-30 Score=262.91 Aligned_cols=186 Identities=17% Similarity=0.300 Sum_probs=143.9
Q ss_pred HHhcCCCCCCccccCCccceEEEEeC----CCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
...++|...+.||+|+||.||+|+.. ++..||+|+++.... ...+.+.+|++++++++||||+++++++.....
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34567888899999999999999843 345899999975432 223678999999999999999999999863221
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhcc---CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCC
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDW---KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~ 598 (640)
......++||||+++|+|.+++... .....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 111 ---~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 111 ---QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTS
T ss_pred ---cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCC
Confidence 1123569999999999999998532 234569999999999999999999998 6999999999999999999
Q ss_pred ceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 599 TAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
.+||+|||+++....... + +.. +.++||||||+++|||++ |
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g 246 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRG 246 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTS
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcC
Confidence 999999999976532211 0 233 789999999999999999 5
No 190
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.96 E-value=5.9e-30 Score=274.72 Aligned_cols=180 Identities=18% Similarity=0.261 Sum_probs=145.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+|+..+.||+|+||.||+|+. .+|+.||||++.... +...+|+++|++++||||+++++++...... .....
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~--~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEK--KDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETT--TTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCC--Cccee
Confidence 3577789999999999999996 468999999987543 2234799999999999999999998754322 23345
Q ss_pred EEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC-CceEEeCCCC
Q 006570 530 VFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA-LTAKLSGYNI 607 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~-~~~kl~DfGl 607 (640)
.++||||+++ ++.+++... .....+++..++.++.|+++||+|||+ .+|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchh
Confidence 7799999986 777766532 235679999999999999999999998 799999999999999965 6789999999
Q ss_pred CccccCCCCc----------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL----------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~----------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ +. . +.++|||||||++|||++|.
T Consensus 204 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~ 254 (420)
T 1j1b_A 204 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254 (420)
T ss_dssp CEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred hhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence 9865322110 22 3 88999999999999999984
No 191
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.96 E-value=2e-30 Score=267.43 Aligned_cols=190 Identities=21% Similarity=0.338 Sum_probs=155.6
Q ss_pred CCHHHHHHHhcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeecccC-CChHHHHHHHHHHhcC-CCccccee
Q 006570 441 FSLEEIEEATNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSI 512 (640)
Q Consensus 441 ~~~~~l~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l 512 (640)
+...++....++|+..+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|++++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34455556678899999999999999999973 3468899999975432 2235789999999999 79999999
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCC-------------CCCCCHHHHHHHHHHHHHHhhhcccCCC
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKK-------------KDMLKWPQRMAIIIGATRGVQFLHTGVA 579 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~ 579 (640)
++++.. .+...++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+
T Consensus 97 ~~~~~~-------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--- 166 (316)
T 2xir_A 97 LGACTK-------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--- 166 (316)
T ss_dssp EEEECC-------TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---
T ss_pred EEEEec-------CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---
Confidence 999852 23458999999999999999975322 1238899999999999999999999
Q ss_pred CCeeccCCCCCceeecCCCceEEeCCCCCccccCCCCc-------------------cCC-CCccceehhhHHHHHHhh-
Q 006570 580 PGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVRNTL-------------------SFH-TDRSSLYKIILIICVITL- 638 (640)
Q Consensus 580 ~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~~-------------------~~~-~~~~DvwS~Gvvl~ellt- 638 (640)
.+|+||||||+||+++.++.+||+|||+++........ +.. +.++|||||||++|||+|
T Consensus 167 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~ 246 (316)
T 2xir_A 167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246 (316)
T ss_dssp TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhC
Confidence 69999999999999999999999999999765332111 233 889999999999999998
Q ss_pred cC
Q 006570 639 CC 640 (640)
Q Consensus 639 G~ 640 (640)
|.
T Consensus 247 g~ 248 (316)
T 2xir_A 247 GA 248 (316)
T ss_dssp SC
T ss_pred CC
Confidence 63
No 192
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=258.85 Aligned_cols=180 Identities=20% Similarity=0.286 Sum_probs=148.9
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc----CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ----RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|.+.+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|++++++++||||+++++++..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------ 77 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN------ 77 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC------
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc------
Confidence 46899999999999999999995 568899999997532 2345789999999999999999999998852
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+.....++||||+++| |.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 78 ~~~~~~~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~d 152 (305)
T 2wtk_C 78 EEKQKMYMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISA 152 (305)
T ss_dssp C---CEEEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred CCCCeEEEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeec
Confidence 1345689999999876 87877652 34568999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCC----------c---------c-CC--CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT----------L---------S-FH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~----------~---------~-~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
||++........ . + .. +.++||||||+++|||++|.
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~ 210 (305)
T 2wtk_C 153 LGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210 (305)
T ss_dssp CTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSS
T ss_pred cccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCC
Confidence 999976532110 0 1 12 67899999999999999984
No 193
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=6.7e-30 Score=261.14 Aligned_cols=175 Identities=15% Similarity=0.324 Sum_probs=144.9
Q ss_pred CCCCCccccCCccceEEEEeC-CC---cEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFLT-DG---SRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
|...+.||+|+||+||+|+.. ++ ..||+|.+..... ...+.+.+|++++++++||||+++++++.. ..
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~ 95 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLP-------PE 95 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC-------SS
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEec-------CC
Confidence 445688999999999999842 22 3799999875332 234678999999999999999999999852 22
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+.+|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~ 170 (298)
T 3pls_A 96 GLPHVLLPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGL 170 (298)
T ss_dssp SCCEEEECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTS
T ss_pred CCcEEEEecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCC
Confidence 335899999999999999974 34568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCC--------------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 608 PLPSKVRNT--------------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 608 a~~~~~~~~--------------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
++....... . +.. +.++||||||+++|||+||
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 224 (298)
T 3pls_A 171 ARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTR 224 (298)
T ss_dssp SCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhC
Confidence 975432110 0 233 8899999999999999996
No 194
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=9.7e-29 Score=251.15 Aligned_cols=229 Identities=18% Similarity=0.134 Sum_probs=134.5
Q ss_pred cEEeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCC
Q 006570 69 KIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFW 148 (640)
Q Consensus 69 gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 148 (640)
++.|.....+.++.++++++... ......++.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|..++
T Consensus 5 ~C~C~~~~~~~~~c~~~~l~~ip----~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 80 (285)
T 1ozn_A 5 ACVCYNEPKVTTSCPQQGLQAVP----VGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA 80 (285)
T ss_dssp TCEEECSSSCEEECCSSCCSSCC----TTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CceECCCCCeEEEcCcCCcccCC----cCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCcc
Confidence 47786544466777777663321 11124666777777766665556667777777777777777666666677777
Q ss_pred CCCEEEcccCc-ccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeec
Q 006570 149 SLEVLNISSNF-IYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVIL 223 (640)
Q Consensus 149 ~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l 223 (640)
+|++|+|++|. +....|..|.++++|++|+|++|.+++.+|. +.++++|++|+|++|++++..+.. +++|+.|+|
T Consensus 81 ~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 160 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (285)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEEC
Confidence 77777777775 5544466666677777777777777666555 666666666666666665444332 345555555
Q ss_pred ccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCc
Q 006570 224 RNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 224 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
++|++++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++.
T Consensus 161 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred CCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 555555444444555555555555555555444555555555555555555555433344455555555555555544
No 195
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.96 E-value=7.9e-30 Score=265.04 Aligned_cols=177 Identities=21% Similarity=0.341 Sum_probs=146.8
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++. .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~ 95 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK--------K 95 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------E
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee--------c
Confidence 356888999999999999999954 5899999998654322 2356789999999999999999999985 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 96 KKRWYLVFEFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp TTEEEEEEECCSEEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCcchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCC
Confidence 4568999999999999888753 4468999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc-----------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL-----------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~-----------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +. . +.++|||||||++|||++|.
T Consensus 170 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 222 (331)
T 4aaa_A 170 FARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222 (331)
T ss_dssp TC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSS
T ss_pred CceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCC
Confidence 99764322110 22 3 88999999999999999984
No 196
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.96 E-value=9e-30 Score=279.31 Aligned_cols=177 Identities=18% Similarity=0.305 Sum_probs=146.8
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.+.|+..+.||+|+||+||+|+. .++..||+|++.... ....+.+.+|+++++.++||||+++++++. .
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--------~ 107 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE--------D 107 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEE--------C
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------e
Confidence 34688899999999999999995 468899999997543 334578999999999999999999999985 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC---CceEEe
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---LTAKLS 603 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl~ 603 (640)
....++|||||++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.. +.+||+
T Consensus 108 ~~~~~lv~e~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 181 (494)
T 3lij_A 108 KRNYYLVMECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIV 181 (494)
T ss_dssp SSEEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred CCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEE
Confidence 4568999999999999999865 3458999999999999999999999 699999999999999764 559999
Q ss_pred CCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++........ ... +.++||||+||++|||++|.
T Consensus 182 DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~ 234 (494)
T 3lij_A 182 DFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGY 234 (494)
T ss_dssp CCTTCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSS
T ss_pred ECCCCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCC
Confidence 99999765432211 334 88999999999999999984
No 197
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.96 E-value=5.4e-30 Score=276.14 Aligned_cols=180 Identities=18% Similarity=0.285 Sum_probs=149.0
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|.+.+.||+|+||.||+|+. .+++.||||++..... ...+++.+|++++++++||||+++++++.... ...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---~~~ 101 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDD---LLK 101 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC---TTT
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCC---CCc
Confidence 36788899999999999999994 5688999999975322 23467899999999999999999999885321 112
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....|+||||++ |+|.++++. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 102 FDELYIVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp CCCEEEEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCC
Confidence 256899999996 599999964 4569999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCC------------------------------C--c--------cCC-CCccceehhhHHHHHHhhc
Q 006570 607 IPLPSKVRN------------------------------T--L--------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 607 la~~~~~~~------------------------------~--~--------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
+++...... + + ... +.++||||+||++|||++|
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g 248 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM 248 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTT
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhc
Confidence 998653211 0 0 233 8899999999999999985
No 198
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=5.7e-30 Score=266.37 Aligned_cols=177 Identities=19% Similarity=0.347 Sum_probs=143.9
Q ss_pred cCCCCCCccccCCccceEEEEeCC-----CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTD-----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.+|+..+.||+|+||.||+|+... +..||||+++.... ...+++.+|++++++++||||+++++++.
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------- 116 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS------- 116 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-------
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe-------
Confidence 456667899999999999998542 23699999975432 23457899999999999999999999884
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 117 -~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~D 190 (333)
T 1mqb_A 117 -KYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSD 190 (333)
T ss_dssp -SSSSEEEEEECCTTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECC
T ss_pred -cCCCcEEEEeCCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECC
Confidence 34568999999999999999975 34568999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 605 YNIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 605 fGla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
||+++....... . ... +.++|||||||++|||+| |.
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~ 248 (333)
T 1mqb_A 191 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE 248 (333)
T ss_dssp CCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCC
Confidence 999986532210 1 233 889999999999999998 63
No 199
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.96 E-value=6.7e-30 Score=272.01 Aligned_cols=181 Identities=17% Similarity=0.216 Sum_probs=144.8
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
.+|+..+.||+|+||+||+|+...+..||+|++..... ...+|+++++.++||||+++++++...... ......
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~--~~~~~~ 113 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDK--KDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSS--SSCEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCC--CCceEE
Confidence 46888999999999999999987777799998864332 224799999999999999999998754321 234457
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec-CCCceEEeCCCCCc
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD-KALTAKLSGYNIPL 609 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~-~~~~~kl~DfGla~ 609 (640)
++||||++++.+....+.......+++..+..++.|+++||+|||+ .+|+||||||+|||++ .++.+||+|||+++
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 8999999874433333222235678999999999999999999999 7999999999999999 78999999999997
Q ss_pred cccCCCCc----------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 610 PSKVRNTL----------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 610 ~~~~~~~~----------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
........ + .. +.++|||||||++|||++|.
T Consensus 191 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~ 239 (394)
T 4e7w_A 191 ILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239 (394)
T ss_dssp ECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 65322110 2 23 88999999999999999984
No 200
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.96 E-value=5.4e-30 Score=258.81 Aligned_cols=177 Identities=23% Similarity=0.365 Sum_probs=150.5
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++.++||||+++++++. .+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~ 77 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR--------EG 77 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEE--------ET
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEE--------cC
Confidence 456888999999999999999954 689999999975432 34578899999999999999999999885 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||.
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 151 (276)
T 2yex_A 78 NIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151 (276)
T ss_dssp TEEEEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEEecCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCC
Confidence 568999999999999999953 4568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCC----------Cc---------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN----------TL---------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~----------~~---------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+....... +. + .. +.++||||||+++|||++|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 205 (276)
T 2yex_A 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205 (276)
T ss_dssp CEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred ccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCC
Confidence 97542111 00 1 22 56899999999999999984
No 201
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.96 E-value=2.1e-30 Score=272.58 Aligned_cols=177 Identities=18% Similarity=0.314 Sum_probs=150.0
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++. .+.
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--------~~~ 104 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY--------SDG 104 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEE--------ETT
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEE--------ECC
Confidence 56888899999999999999954 68999999997542 223467899999999999999999999886 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++.. ...+++..+..++.+++.||+|||+. .+|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 179 (360)
T 3eqc_A 105 EISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVS 179 (360)
T ss_dssp EEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred EEEEEEECCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCC
Confidence 68999999999999999975 34589999999999999999999972 28999999999999999999999999998
Q ss_pred ccccCCC------C---c------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKVRN------T---L------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~~~------~---~------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+...... + . +.. +.++|||||||++|||+||.
T Consensus 180 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 227 (360)
T 3eqc_A 180 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227 (360)
T ss_dssp HHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTS
T ss_pred cccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 6432111 0 0 334 88999999999999999984
No 202
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.96 E-value=2.1e-30 Score=262.39 Aligned_cols=176 Identities=21% Similarity=0.396 Sum_probs=143.5
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCe
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.++|+..+.||+|+||.||+|+.. |+.||||+++... ..+.+.+|++++++++||||+++++++.. ....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------~~~~ 89 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE-------EKGG 89 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECC-------C--C
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEc-------CCCc
Confidence 457888999999999999999874 8899999997432 45789999999999999999999998752 2345
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~ 165 (278)
T 1byg_A 90 LYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTK 165 (278)
T ss_dssp CEEEECCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred eEEEEecCCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccc
Confidence 79999999999999999752 12237899999999999999999999 699999999999999999999999999997
Q ss_pred cccCCCCc--------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 610 PSKVRNTL--------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 610 ~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
........ +.. +.++||||||+++|||+| |
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g 211 (278)
T 1byg_A 166 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 211 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred cccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCC
Confidence 65432111 233 889999999999999998 6
No 203
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.96 E-value=3.1e-30 Score=267.30 Aligned_cols=189 Identities=22% Similarity=0.364 Sum_probs=153.5
Q ss_pred HHHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccC
Q 006570 445 EIEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 445 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~ 522 (640)
++....++|+..+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+++++++ +||||+++++++.....
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~- 95 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP- 95 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC-
Confidence 3344567889999999999999999995 578999999997543 3457899999999999 89999999999874221
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEE
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKL 602 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl 602 (640)
+......++||||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 96 -~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 96 -PGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEE
T ss_pred -ccccceEEEEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEE
Confidence 11245789999999999999999753 23568999999999999999999999 69999999999999999999999
Q ss_pred eCCCCCccccCCCC--------c--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNT--------L--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~--------~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||++........ . ... +.++|||||||++|||+||.
T Consensus 171 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~ 231 (326)
T 2x7f_A 171 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231 (326)
T ss_dssp CCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSS
T ss_pred eeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCC
Confidence 99999876532210 0 122 78999999999999999984
No 204
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.96 E-value=3.5e-30 Score=261.16 Aligned_cols=177 Identities=19% Similarity=0.291 Sum_probs=146.6
Q ss_pred hcCCCCCCccccCCccceEEEEeCC----CcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
.++|...+.||+|+||.||+|+..+ +..||+|.+.... ....+.+.+|++++++++||||+++++++.
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------- 83 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE------- 83 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-------
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-------
Confidence 4568888999999999999998532 3469999997542 223567899999999999999999999873
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 84 --~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~D 156 (281)
T 3cc6_A 84 --EEPTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGD 156 (281)
T ss_dssp --SSSCEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECC
T ss_pred --CCCCEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCc
Confidence 12358999999999999999752 3458999999999999999999999 7999999999999999999999999
Q ss_pred CCCCccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 605 YNIPLPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 605 fGla~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
||+++....... + +.. +.++||||||+++|||+| |.
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~ 212 (281)
T 3cc6_A 157 FGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 212 (281)
T ss_dssp CCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCC
Confidence 999976543211 0 233 889999999999999998 63
No 205
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.96 E-value=4.7e-30 Score=266.25 Aligned_cols=176 Identities=19% Similarity=0.397 Sum_probs=143.6
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcE----EEEEEeecc-cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSR----VSVKCLKLK-QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~ 524 (640)
++|+..+.||+|+||.||+|+. .+++. ||+|.+... .....+++.+|++++++++||||+++++++..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------ 88 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES------
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec------
Confidence 5688899999999999999994 34543 577777543 33456889999999999999999999999862
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
...++|+||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 89 ---~~~~~v~~~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~D 160 (327)
T 3lzb_A 89 ---STVQLITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp ---SSEEEEECCCSSCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECC
T ss_pred ---CCceEEEEecCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEcc
Confidence 237899999999999999975 24568999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 605 YNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 605 fGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
||+++....... + +.. +.++|||||||++|||++ |.
T Consensus 161 fG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~ 217 (327)
T 3lzb_A 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217 (327)
T ss_dssp TTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCC
Confidence 999986532211 1 233 889999999999999998 63
No 206
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.96 E-value=2.7e-30 Score=269.58 Aligned_cols=174 Identities=18% Similarity=0.327 Sum_probs=145.2
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~ 526 (640)
..++|+..+.||+|+||.||+|+. .+++.||||+++.... ...+|++++.++ +||||+++++++. +
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~--------~ 87 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYD--------D 87 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEE--------C
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEE--------c
Confidence 346788899999999999999995 4688999999975433 245688888887 7999999999885 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC----CceEE
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA----LTAKL 602 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~----~~~kl 602 (640)
+...|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+.++ +.+||
T Consensus 88 ~~~~~lv~E~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl 161 (342)
T 2qr7_A 88 GKYVYVVTELMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRI 161 (342)
T ss_dssp SSEEEEEECCCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred CCEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEE
Confidence 5678999999999999999964 4568999999999999999999999 699999999999998443 35999
Q ss_pred eCCCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 162 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 217 (342)
T 2qr7_A 162 CDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGY 217 (342)
T ss_dssp CCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred EECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCC
Confidence 999999865332110 222 78999999999999999984
No 207
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.96 E-value=4.1e-30 Score=289.20 Aligned_cols=169 Identities=20% Similarity=0.367 Sum_probs=143.5
Q ss_pred CccccCCccceEEEEe---CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCCeEE
Q 006570 457 NLIGEGSQGQLYKGFL---TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
+.||+|+||.||+|.+ ..++.||||+++.... ...+++.+|+++|++++||||++++++|. .+..+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~---------~~~~~ 445 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE---------AESWM 445 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE---------SSSEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe---------cCCEE
Confidence 4799999999999964 2467899999976432 33578999999999999999999999884 12378
Q ss_pred EEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 532 LVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+|||||++|+|.++++. ...+++..++.|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+++..
T Consensus 446 lv~E~~~~g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 446 LVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp EEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred EEEEccCCCCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 99999999999999974 4568999999999999999999999 79999999999999999999999999999765
Q ss_pred cCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 612 KVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 612 ~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
..... + ... +.++|||||||++|||+| |.
T Consensus 520 ~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~ 570 (635)
T 4fl3_A 520 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 570 (635)
T ss_dssp TC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 33211 0 224 889999999999999998 63
No 208
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.96 E-value=1e-29 Score=262.39 Aligned_cols=182 Identities=15% Similarity=0.269 Sum_probs=144.3
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccC------C
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD------H 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~------~ 523 (640)
++|...+.||+|+||.||+|+.. +++.||||++........+++.+|++++++++||||+++++++...... .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56888899999999999999964 5899999999765544557889999999999999999999987422110 1
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec-CCCceEE
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD-KALTAKL 602 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~-~~~~~kl 602 (640)
.......++||||++ |+|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++ +++.+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEE
T ss_pred ccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEE
Confidence 123467899999997 699999953 458999999999999999999999 6999999999999997 5679999
Q ss_pred eCCCCCccccCCC-----------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRN-----------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~-----------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++...... + . . .. +.++|||||||++|||+||.
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~ 222 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222 (320)
T ss_dssp CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCC
Confidence 9999998653211 0 0 2 33 88999999999999999984
No 209
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.96 E-value=1.3e-29 Score=258.92 Aligned_cols=175 Identities=15% Similarity=0.148 Sum_probs=148.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+++++++ +|+|++++++++. .+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~--------~~ 78 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ--------EG 78 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEE--------ET
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecC--------CC
Confidence 35688899999999999999994 678999999986432 335688999999999 7999999999875 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc-----eEE
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT-----AKL 602 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~-----~kl 602 (640)
...++||||+ +|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||
T Consensus 79 ~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl 152 (298)
T 1csn_A 79 LHNVLVIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYV 152 (298)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEE
T ss_pred ceeEEEEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEE
Confidence 5689999999 99999999752 3458999999999999999999998 79999999999999988776 999
Q ss_pred eCCCCCccccCCCC---------------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNT---------------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~---------------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++....... . +.. +.++|||||||++|||++|.
T Consensus 153 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 215 (298)
T 1csn_A 153 VDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGS 215 (298)
T ss_dssp CCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred EECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCC
Confidence 99999976543211 0 233 88999999999999999984
No 210
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=6e-30 Score=260.27 Aligned_cols=176 Identities=18% Similarity=0.336 Sum_probs=147.2
Q ss_pred cCCCCCC-ccccCCccceEEEEeC---CCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTN-LIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|.+.+ .||+|+||.||+|+.. ++..||||+++.... ...+++.+|++++++++||||+++++++.
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-------- 80 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-------- 80 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec--------
Confidence 3444555 8999999999999853 577899999976432 23567899999999999999999999883
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 81 -~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Df 154 (287)
T 1u59_A 81 -AEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDF 154 (287)
T ss_dssp -SSSEEEEEECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCC
T ss_pred -CCCcEEEEEeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcc
Confidence 1347999999999999999964 34568999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 606 NIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 606 Gla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
|+++....... . +.. +.++||||||+++|||+| |.
T Consensus 155 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~ 211 (287)
T 1u59_A 155 GLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 211 (287)
T ss_dssp TTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred cceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence 99976532211 0 233 889999999999999998 63
No 211
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.96 E-value=1.6e-29 Score=277.94 Aligned_cols=177 Identities=17% Similarity=0.288 Sum_probs=148.9
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-------------CChHHHHHHHHHHhcCCCcccceeeeE
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-------------HLPQSLMQHVELLSKLRHRHLVSILGH 515 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~g~ 515 (640)
.++|.+.+.||+|+||+||+|+. .+++.||||++..... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 46789999999999999999995 4588999999975321 335678999999999999999999999
Q ss_pred EEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec
Q 006570 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (640)
Q Consensus 516 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~ 595 (640)
+. .....++|||||++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++
T Consensus 115 ~~--------~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~ 180 (504)
T 3q5i_A 115 FE--------DKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLE 180 (504)
T ss_dssp EE--------CSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEES
T ss_pred EE--------cCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEe
Confidence 85 45678999999999999999965 3458999999999999999999999 6999999999999998
Q ss_pred CCC---ceEEeCCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 596 KAL---TAKLSGYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ~~~---~~kl~DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.++ .+||+|||+++........ ... +.++||||+||++|||++|.
T Consensus 181 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~ 244 (504)
T 3q5i_A 181 NKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGY 244 (504)
T ss_dssp STTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSS
T ss_pred cCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCC
Confidence 775 6999999999765432111 334 88999999999999999984
No 212
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.96 E-value=6e-31 Score=278.58 Aligned_cols=187 Identities=14% Similarity=0.178 Sum_probs=142.9
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc---cCCChHHHHHHH---HHHhcCCCcccceeeeEEEec---
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK---QRHLPQSLMQHV---ELLSKLRHRHLVSILGHCILT--- 519 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~g~~~~~--- 519 (640)
.++|...+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+ +.+++++||||+++++.+...
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35677889999999999999995 56999999999743 223457889999 556666899999998443210
Q ss_pred ccCCC--------CCCC-----eEEEEEEccCCCCHhHHhhccCC----CCCCCHHHHHHHHHHHHHHhhhcccCCCCCe
Q 006570 520 YQDHP--------NTGS-----TVFLVLEHISNGSLRDYLTDWKK----KDMLKWPQRMAIIIGATRGVQFLHTGVAPGI 582 (640)
Q Consensus 520 ~~~~~--------~~~~-----~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 582 (640)
.++.. .++. ..++||||+ +|+|.+++..... ...+++..++.|+.|++.||+|||+ .+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 00100 0011 378999999 6899999975321 1234468888999999999999999 699
Q ss_pred eccCCCCCceeecCCCceEEeCCCCCccccCCC------Cc-------cC-----------C-CCccceehhhHHHHHHh
Q 006570 583 FGNNLKTENILLDKALTAKLSGYNIPLPSKVRN------TL-------SF-----------H-TDRSSLYKIILIICVIT 637 (640)
Q Consensus 583 iHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~------~~-------~~-----------~-~~~~DvwS~Gvvl~ell 637 (640)
+||||||+|||++.++.+||+|||+++...... .+ +. . +.++|||||||++|||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell 307 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW 307 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH
Confidence 999999999999999999999999997543211 01 22 4 88999999999999999
Q ss_pred hcC
Q 006570 638 LCC 640 (640)
Q Consensus 638 tG~ 640 (640)
||.
T Consensus 308 tg~ 310 (377)
T 3byv_A 308 CAD 310 (377)
T ss_dssp HSS
T ss_pred HCC
Confidence 984
No 213
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.96 E-value=9.9e-30 Score=256.94 Aligned_cols=177 Identities=20% Similarity=0.316 Sum_probs=151.1
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecc---cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLK---QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|.+.+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|+++++.++||||+++++++.
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 81 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS-------- 81 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEe--------
Confidence 357888999999999999999964 7899999999753 2344578999999999999999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.....++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 82 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~df 155 (276)
T 2h6d_A 82 TPTDFFMVMEYVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADF 155 (276)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCC
T ss_pred cCCeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeec
Confidence 34568999999999999999975 2458999999999999999999999 69999999999999999999999999
Q ss_pred CCCccccCCCCc----------------cC-C-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL----------------SF-H-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~-~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|++......... +. . +.++||||||+++|||++|.
T Consensus 156 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 208 (276)
T 2h6d_A 156 GLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT 208 (276)
T ss_dssp CGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSS
T ss_pred ccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCC
Confidence 999765432110 12 2 57899999999999999984
No 214
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.96 E-value=3.8e-30 Score=263.55 Aligned_cols=178 Identities=16% Similarity=0.307 Sum_probs=148.8
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.+.|++.+.||+|+||.||+|+.. +++.||+|++........+++.+|++++++++||||+++++++. ...
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~~ 89 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY--------HDG 89 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEE--------CC-
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeee--------eCC
Confidence 467888999999999999999964 58899999998666666788999999999999999999999986 234
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIP 608 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla 608 (640)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 90 ~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 164 (302)
T 2j7t_A 90 KLWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVS 164 (302)
T ss_dssp CEEEEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred eEEEEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCC
Confidence 689999999999999998642 3458999999999999999999999 69999999999999999999999999987
Q ss_pred ccccC--------CCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 609 LPSKV--------RNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 609 ~~~~~--------~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..... ..+. ... +.++||||||+++|||++|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~ 219 (302)
T 2j7t_A 165 AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219 (302)
T ss_dssp HHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCC
Confidence 43210 0000 122 78999999999999999984
No 215
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=1.3e-29 Score=259.42 Aligned_cols=172 Identities=18% Similarity=0.312 Sum_probs=145.9
Q ss_pred cCCCCC-CccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHH-hcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPT-NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELL-SKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~-~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|... +.||+|+||.||+|+. .+++.||+|+++. ...+.+|++++ +..+||||+++++++..... ..
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~----~~ 87 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA----GR 87 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET----TE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcC----CC
Confidence 456665 7799999999999995 5689999999963 25678888888 55699999999998863221 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---CCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---ALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~D 604 (640)
...++||||+++|+|.+++.. .....+++..++.++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQD-RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHH-CTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ceEEEEEeecCCCcHHHHHHh-ccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEec
Confidence 568999999999999999986 233569999999999999999999999 79999999999999998 78999999
Q ss_pred CCCCccccCCCCccCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTLSFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||++.... +.. +.++|||||||++|||+||.
T Consensus 164 fg~a~~~~-----~~~~~~~~DiwslG~il~el~tg~ 195 (299)
T 3m2w_A 164 FGFAKETT-----GEKYDKSCDMWSLGVIMYILLCGY 195 (299)
T ss_dssp CTTCEECT-----TCGGGGHHHHHHHHHHHHHHHHSS
T ss_pred cccccccc-----cccCCchhhHHHHHHHHHHHHHCC
Confidence 99997653 233 88999999999999999984
No 216
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.96 E-value=1.1e-29 Score=277.98 Aligned_cols=177 Identities=20% Similarity=0.333 Sum_probs=150.6
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecc--cCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLK--QRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|++.+.||+|+||+||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++. .
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--------~ 92 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE--------D 92 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE--------C
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEE--------c
Confidence 35688899999999999999995 47899999999653 2345678999999999999999999999985 4
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec---CCCceEEe
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD---KALTAKLS 603 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~---~~~~~kl~ 603 (640)
....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++ .++.+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 166 (486)
T 3mwu_A 93 SSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKII 166 (486)
T ss_dssp SSEEEEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEEC
T ss_pred CCEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEE
Confidence 5668999999999999999865 3458999999999999999999999 6999999999999995 45689999
Q ss_pred CCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++........ ... +.++||||+||++|||++|.
T Consensus 167 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~ 219 (486)
T 3mwu_A 167 DFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGT 219 (486)
T ss_dssp SCSCTTTBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ECCcCeECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999765432211 223 78999999999999999984
No 217
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.96 E-value=7.5e-30 Score=279.36 Aligned_cols=177 Identities=20% Similarity=0.362 Sum_probs=152.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-------- 96 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE-------- 96 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE--------
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE--------
Confidence 35688899999999999999995 478999999997542 345678999999999999999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEE
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKL 602 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl 602 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl 170 (484)
T 3nyv_A 97 DKGYFYLVGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRI 170 (484)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred eCCEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEE
Confidence 45678999999999999999964 4568999999999999999999999 699999999999999 56789999
Q ss_pred eCCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||+++........ ... +.++||||+||++|||++|+
T Consensus 171 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~ 224 (484)
T 3nyv_A 171 IDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGC 224 (484)
T ss_dssp CCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EeeeeeEEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCC
Confidence 999998765433211 224 88999999999999999985
No 218
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.96 E-value=7.6e-30 Score=264.66 Aligned_cols=179 Identities=23% Similarity=0.402 Sum_probs=147.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcE--EEEEEeecc-cCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSR--VSVKCLKLK-QRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 525 (640)
++|+..+.||+|+||.||+|+. .++.. ||+|.++.. .....+.+.+|+++++++ +||||+++++++.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-------- 96 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-------- 96 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE--------
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeee--------
Confidence 5688889999999999999995 45664 499998753 233456799999999999 8999999999985
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccC-------------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCce
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWK-------------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENI 592 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NI 592 (640)
.....++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+ .+|+||||||+||
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NI 173 (327)
T 1fvr_A 97 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNI 173 (327)
T ss_dssp ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGE
T ss_pred eCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceE
Confidence 3456899999999999999997532 13468999999999999999999999 7999999999999
Q ss_pred eecCCCceEEeCCCCCccccCCCC---------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 593 LLDKALTAKLSGYNIPLPSKVRNT---------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 593 Ll~~~~~~kl~DfGla~~~~~~~~---------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
+++.++.+||+|||+++....... + +.. +.++|||||||++|||+| |.
T Consensus 174 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~ 239 (327)
T 1fvr_A 174 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG 239 (327)
T ss_dssp EECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred EEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCC
Confidence 999999999999999874322111 0 233 889999999999999998 63
No 219
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.96 E-value=3.2e-30 Score=260.95 Aligned_cols=182 Identities=20% Similarity=0.303 Sum_probs=150.3
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+++.||+|++..... ...+.+.+|++++++++||||+++++++... .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~ 78 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR------T 78 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG------G
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC------C
Confidence 35788889999999999999995 4689999999975432 2346789999999999999999999988632 2
Q ss_pred CCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCC-----eeccCCCCCceeecCCCce
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPG-----IFGNNLKTENILLDKALTA 600 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-----iiHrDlk~~NILl~~~~~~ 600 (640)
....++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~ 155 (279)
T 2w5a_A 79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNV 155 (279)
T ss_dssp GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCE
T ss_pred CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCE
Confidence 356899999999999999997532 24558999999999999999999998 46 9999999999999999999
Q ss_pred EEeCCCCCccccCCCC----------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNT----------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~----------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||+++....... . +.. +.++||||||+++|||+||.
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 213 (279)
T 2w5a_A 156 KLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213 (279)
T ss_dssp EECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSS
T ss_pred EEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCC
Confidence 9999999876543211 0 233 88999999999999999984
No 220
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.96 E-value=8.9e-30 Score=261.99 Aligned_cols=180 Identities=16% Similarity=0.281 Sum_probs=144.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
.++|++.+.||+|+||.||+|+. .+|+.||||+++.... ...+++.+|++++++++||||+++++++..
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------- 103 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE------- 103 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-------
Confidence 35688899999999999999994 5789999999975332 234678899999999999999999999862
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccC-CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWK-KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
....++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 104 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~D 179 (310)
T 2wqm_A 104 -DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGD 179 (310)
T ss_dssp -TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECC
T ss_pred -CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEe
Confidence 346899999999999999996422 34568999999999999999999999 6999999999999999999999999
Q ss_pred CCCCccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ +.. +.++||||||+++|||++|.
T Consensus 180 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~ 233 (310)
T 2wqm_A 180 LGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 233 (310)
T ss_dssp C------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 9998765332110 233 88999999999999999984
No 221
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.96 E-value=2.2e-29 Score=259.51 Aligned_cols=177 Identities=19% Similarity=0.325 Sum_probs=146.8
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
..++|+..+.||+|+||.||+|+.. +|+.||||.+.... ..+++.+|++++++++||||+++++++. ..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~ 96 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF--------KN 96 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEE--------ET
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEE--------eC
Confidence 4567889999999999999999954 58999999997543 3578999999999999999999999886 23
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||+++|+|.+++.. ....+++..+..++.+++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 171 (314)
T 3com_A 97 TDLWIVMEYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGV 171 (314)
T ss_dssp TEEEEEEECCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEeecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeeccc
Confidence 468999999999999999963 24568999999999999999999999 7999999999999999999999999999
Q ss_pred CccccCCCCc-----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+......... +.. +.++||||||+++|||++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 222 (314)
T 3com_A 172 AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222 (314)
T ss_dssp CEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSS
T ss_pred chhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCC
Confidence 9765332110 233 88999999999999999984
No 222
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.96 E-value=6.7e-30 Score=267.17 Aligned_cols=179 Identities=17% Similarity=0.179 Sum_probs=142.5
Q ss_pred cCCCCCCccccCCccceEEEEeC----CCcEEEEEEeecccCC-----------ChHHHHHHHHHHhcCCCcccceeeeE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT----DGSRVSVKCLKLKQRH-----------LPQSLMQHVELLSKLRHRHLVSILGH 515 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~g~ 515 (640)
++|.+.+.||+|+||.||+|+.. ++..||||+....... ..+.+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888999999999999999964 5778999998754321 12346788889999999999999999
Q ss_pred EEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec
Q 006570 516 CILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD 595 (640)
Q Consensus 516 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~ 595 (640)
+...+. .....++||||+ +|+|.+++... ..+++.+++.++.|++.||+|||+ .+|+||||||+|||++
T Consensus 117 ~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 117 GLTEFK----GRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEESS----SCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEE
T ss_pred cccccC----CCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEc
Confidence 874322 356789999999 99999999752 368999999999999999999999 6999999999999999
Q ss_pred CCC--ceEEeCCCCCccccCCC---------------Cc---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 596 KAL--TAKLSGYNIPLPSKVRN---------------TL---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ~~~--~~kl~DfGla~~~~~~~---------------~~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.++ .+||+|||+++...... +. +.. +.++|||||||++|||+||.
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~ 257 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGK 257 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 887 99999999997542211 00 334 88999999999999999984
No 223
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.96 E-value=4.5e-30 Score=261.75 Aligned_cols=176 Identities=19% Similarity=0.354 Sum_probs=145.9
Q ss_pred hcCCCCCC-ccccCCccceEEEEe---CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 450 TNNFDPTN-LIGEGSQGQLYKGFL---TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 450 ~~~~~~~~-~ig~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
.++|.+.+ .||+|+||.||+|.. .+++.||||+++..... ..+++.+|+++++.++||||+++++++.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------ 88 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------ 88 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE------
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC------
Confidence 35566667 899999999999963 34678999999754322 2467999999999999999999999883
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
....++||||+++|+|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 89 ---~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~ 159 (291)
T 1xbb_A 89 ---AESWMLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKIS 159 (291)
T ss_dssp ---SSSEEEEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEEC
T ss_pred ---CCCcEEEEEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEc
Confidence 2347999999999999999975 3458999999999999999999999 699999999999999999999999
Q ss_pred CCCCCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 604 GYNIPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 604 DfGla~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
|||+++........ +.. +.++||||||+++|||+| |.
T Consensus 160 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~ 218 (291)
T 1xbb_A 160 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 218 (291)
T ss_dssp CCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCC
Confidence 99999765332110 223 779999999999999998 63
No 224
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=1.5e-28 Score=255.56 Aligned_cols=255 Identities=19% Similarity=0.172 Sum_probs=222.1
Q ss_pred CCCCCCCcccEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcE
Q 006570 60 CYLPSSSSLKIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKV 128 (640)
Q Consensus 60 C~~~~~~~~gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~ 128 (640)
|.|. .+.|+. .+++.|++++|.++.. ++..+...+.|+.|+|++|.+.+..|..|.++++|++
T Consensus 33 c~l~-----~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 106 (332)
T 2ft3_A 33 CHLR-----VVQCSDLGLKAVPKEISPDTTLLDLQNNDISEL-RKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQK 106 (332)
T ss_dssp EETT-----EEECCSSCCSSCCSCCCTTCCEEECCSSCCCEE-CTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCE
T ss_pred ccCC-----EEECCCCCccccCCCCCCCCeEEECCCCcCCcc-CHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCE
Confidence 5565 688853 2688999999988543 2223445689999999999999888999999999999
Q ss_pred eecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCc--cCCC-ccCcCcCCeeEccCC
Q 006570 129 LSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNG--SVPD-LQRLVLLEELNLGGN 205 (640)
Q Consensus 129 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~-~~~l~~L~~L~L~~N 205 (640)
|+|++|.++ .+|..+. ++|++|+|++|.+++..+..|.++++|+.|++++|.++. ..+. +..+ +|++|++++|
T Consensus 107 L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n 182 (332)
T 2ft3_A 107 LYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEA 182 (332)
T ss_dssp EECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSS
T ss_pred EECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCC
Confidence 999999996 6777665 899999999999997666679999999999999999974 5555 7777 9999999999
Q ss_pred CCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCcccc
Q 006570 206 DFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285 (640)
Q Consensus 206 ~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 285 (640)
++++......++|+.|++++|++++..|..|.++++|+.|+|++|++++..|..+..+++|++|+|++|+++ .+|..+.
T Consensus 183 ~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 261 (332)
T 2ft3_A 183 KLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLP 261 (332)
T ss_dssp BCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGG
T ss_pred CCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhh
Confidence 999866666789999999999999888899999999999999999999988889999999999999999998 5888899
Q ss_pred CCCCCCEEeccCccCcccCCCCccCC------CCCceeeecccccc
Q 006570 286 CSAKLNFVEISHNLLIGKLPSCIGSN------SLNRTVVSTWNCLS 325 (640)
Q Consensus 286 ~~~~L~~L~ls~N~l~~~~p~~~~~~------~~l~~l~l~~N~l~ 325 (640)
.+++|+.|++++|++++..+..|... ..++.+++++|.+.
T Consensus 262 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp GCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred cCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 99999999999999998777777653 56889999999876
No 225
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=6.9e-29 Score=271.25 Aligned_cols=251 Identities=20% Similarity=0.161 Sum_probs=175.3
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
+++.|+|++|.+++.. +..+...+.|++|+|++|.+....+..|.++++|++|+|++|.+++..|..|..+++|++|+|
T Consensus 57 ~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 57 HLEELELNENIVSAVE-PGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TCCEEECTTSCCCEEC-TTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCEEECCCCccCEeC-hhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 4556666666553321 111223355555666555555444445555555555555555555555555555555555555
Q ss_pred ccCcccccCCccccCCCCCCEEEccCccCCccCCC-------------------------ccCcCcCCeeEccCCCCCCC
Q 006570 156 SSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-------------------------LQRLVLLEELNLGGNDFGPK 210 (640)
Q Consensus 156 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-------------------------~~~l~~L~~L~L~~N~l~~~ 210 (640)
++|.+.+..|..|.++++|+.|+|++|++++.++. |..+++|++|++++|.+.+.
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~ 215 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDT 215 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCE
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccc
Confidence 55555555555555555555555555555554443 44445555555555444443
Q ss_pred CCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCC
Q 006570 211 FPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCS 287 (640)
Q Consensus 211 ~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 287 (640)
+|.. ..+|+.|+|++|++++..+..|.++++|+.|+|++|++++..+..|..+++|++|+|++|++++..|..|..+
T Consensus 216 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 295 (477)
T 2id5_A 216 MTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGL 295 (477)
T ss_dssp ECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTC
T ss_pred cCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCc
Confidence 3332 2378888899999986555688999999999999999998888899999999999999999999999999999
Q ss_pred CCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 288 AKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 288 ~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
++|+.|+|++|+|++..+..|..+++|+.+++++|.+...
T Consensus 296 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 296 NYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp TTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred ccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 9999999999999988888889999999999999998764
No 226
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.96 E-value=8.1e-30 Score=263.87 Aligned_cols=176 Identities=19% Similarity=0.286 Sum_probs=145.2
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--------CChHHHHHHHHHHhcCCCcccceeeeEEEecc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--------HLPQSLMQHVELLSKLRHRHLVSILGHCILTY 520 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 520 (640)
.++|.+.+.||+|+||.||+|+. .+++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--- 85 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD--- 85 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE---
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc---
Confidence 45688899999999999999995 4688999999864321 12345889999999999999999999874
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc-
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT- 599 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~- 599 (640)
. ...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 86 -----~-~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~ 153 (322)
T 2ycf_A 86 -----A-EDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEED 153 (322)
T ss_dssp -----S-SSEEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSS
T ss_pred -----C-CceEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCC
Confidence 1 237999999999999999964 4568999999999999999999999 69999999999999987654
Q ss_pred --eEEeCCCCCccccCCCC---------c----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 --AKLSGYNIPLPSKVRNT---------L----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 --~kl~DfGla~~~~~~~~---------~----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++....... + ... +.++|||||||++|||++|.
T Consensus 154 ~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~ 216 (322)
T 2ycf_A 154 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 216 (322)
T ss_dssp CCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSS
T ss_pred CeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999986543210 0 123 78999999999999999984
No 227
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.96 E-value=1.3e-29 Score=259.18 Aligned_cols=177 Identities=21% Similarity=0.386 Sum_probs=146.8
Q ss_pred cCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|+..+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++. .+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~~ 74 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH--------TE 74 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEE--------ET
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEe--------cC
Confidence 57888899999999999999954 68999999987543 233478899999999999999999999986 23
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||++ |+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 75 ~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~ 149 (299)
T 2r3i_A 75 NKLYLVFEFLH-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGL 149 (299)
T ss_dssp TEEEEEEECCS-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTH
T ss_pred CceEEEEEccc-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchh
Confidence 56899999997 5999999753 33568999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCC--------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN--------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~--------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+....... + . + .. +.++|||||||++|||+||.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 201 (299)
T 2r3i_A 150 ARAFGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRR 201 (299)
T ss_dssp HHHHCCCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred hhhccCCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCC
Confidence 86543211 0 0 2 23 88999999999999999984
No 228
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.96 E-value=1.9e-29 Score=257.88 Aligned_cols=178 Identities=22% Similarity=0.358 Sum_probs=150.9
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC---------CChHHHHHHHHHHhcCC-CcccceeeeEEE
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---------HLPQSLMQHVELLSKLR-HRHLVSILGHCI 517 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~g~~~ 517 (640)
..++|+..+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 356788999999999999999995 4689999999975431 12356789999999995 999999999885
Q ss_pred ecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC
Q 006570 518 LTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA 597 (640)
Q Consensus 518 ~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~ 597 (640)
.....++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 95 --------~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~ 160 (298)
T 1phk_A 95 --------TNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDD 160 (298)
T ss_dssp --------CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTT
T ss_pred --------cCCeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCC
Confidence 34668999999999999999975 3468999999999999999999999 799999999999999999
Q ss_pred CceEEeCCCCCccccCCCCc----------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 598 LTAKLSGYNIPLPSKVRNTL----------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 598 ~~~kl~DfGla~~~~~~~~~----------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.+||+|||++......... ... +.++||||||+++|||++|.
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~ 226 (298)
T 1phk_A 161 MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226 (298)
T ss_dssp CCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred CcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCC
Confidence 99999999999765332111 112 77999999999999999984
No 229
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.96 E-value=1.5e-29 Score=268.88 Aligned_cols=174 Identities=19% Similarity=0.287 Sum_probs=144.7
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCC--CcccceeeeEEEecccCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLR--HRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~~~~~ 526 (640)
..|++.+.||+|+||.||+|...+++.||||++..... ...+.+.+|++++++++ ||||+++++++. .
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~--------~ 127 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI--------T 127 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE--------C
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEe--------c
Confidence 35888999999999999999987799999999975432 23467899999999996 599999999886 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||| +.+|+|.+++.. ...+++.++..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||
T Consensus 128 ~~~~~lv~E-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG 199 (390)
T 2zmd_A 128 DQYIYMVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFG 199 (390)
T ss_dssp SSEEEEEEE-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCS
T ss_pred CCEEEEEEe-cCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecC
Confidence 456899999 567899999975 3468899999999999999999998 6999999999999995 5889999999
Q ss_pred CCccccCCCC----------c---------c-----------CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNT----------L---------S-----------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~----------~---------~-----------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++....... . + .. +.++|||||||++|||++|.
T Consensus 200 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~ 264 (390)
T 2zmd_A 200 IANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264 (390)
T ss_dssp SSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSS
T ss_pred ccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCC
Confidence 9986532210 0 1 13 77899999999999999984
No 230
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.96 E-value=1.5e-29 Score=267.18 Aligned_cols=180 Identities=16% Similarity=0.260 Sum_probs=144.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+++++.++||||+++++++.... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~~ 101 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK--SLEE 101 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCC--STTT
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccc--cccc
Confidence 35788899999999999999984 4688999999975322 22457889999999999999999999885321 1123
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+++ +|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEee
Confidence 3578999999975 89888852 48899999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ +.. +.++|||||||++|||++|.
T Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 223 (371)
T 2xrw_A 173 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223 (371)
T ss_dssp C----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred cccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence 99865432110 333 88999999999999999984
No 231
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.96 E-value=6.4e-30 Score=269.34 Aligned_cols=181 Identities=17% Similarity=0.297 Sum_probs=134.9
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+ ..+|+.||||++..... ...+.+.+|+++++.++||||+++++++.... ....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~~ 105 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR--SLEE 105 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS--SGGG
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--cccc
Confidence 3678889999999999999998 45689999999965322 23467889999999999999999999885311 1112
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecc
Confidence 34579999999 6799998853 468999999999999999999999 799999999999999999999999999
Q ss_pred CCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ + .. +.++||||+||++|||++|.
T Consensus 178 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 227 (367)
T 2fst_X 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSS
T ss_pred ccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCC
Confidence 99865432111 2 34 88999999999999999984
No 232
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.96 E-value=2.3e-29 Score=262.48 Aligned_cols=182 Identities=21% Similarity=0.343 Sum_probs=149.0
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhc--CCCcccceeeeEEEecccCC
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSK--LRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~g~~~~~~~~~ 523 (640)
-....++|+..+.||+|+||.||+|+. +++.||||++... ..+.+.+|++++.. ++||||+++++++....
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~--- 109 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN--- 109 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC---
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC---
Confidence 344567899999999999999999998 4899999999743 34678889988887 78999999999986321
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC-----CCCeeccCCCCCceeecCCC
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV-----APGIFGNNLKTENILLDKAL 598 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlk~~NILl~~~~ 598 (640)
......++||||+++|+|.+++.. ..+++.+++.++.|++.||+|||... ..+|+||||||+||+++.++
T Consensus 110 -~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 110 -GTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp -SSCCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTS
T ss_pred -CccceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCC
Confidence 112368999999999999999964 35899999999999999999999210 17999999999999999999
Q ss_pred ceEEeCCCCCccccCCCC------------c---------cC------C-CCccceehhhHHHHHHhhc
Q 006570 599 TAKLSGYNIPLPSKVRNT------------L---------SF------H-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~------------~---------~~------~-~~~~DvwS~Gvvl~elltG 639 (640)
.+||+|||+++....... . +. . +.++|||||||++|||+||
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg 253 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence 999999999975533210 0 11 1 3689999999999999998
No 233
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.96 E-value=5.4e-30 Score=262.42 Aligned_cols=181 Identities=17% Similarity=0.336 Sum_probs=136.8
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
..++|...+.||+|+||.||+|+. .+++.||||++.... ....+++.+|++++++++||||+++++++. .
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------~ 84 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV--------V 84 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEE--------S
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEe--------e
Confidence 457889999999999999999984 468899999986543 234567889999999999999999999886 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhcc-----CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDW-----KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~-----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
....++||||+++|+|.+++... .....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~k 161 (303)
T 2vwi_A 85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQ 161 (303)
T ss_dssp SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEE
T ss_pred cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEE
Confidence 34589999999999999999641 124568999999999999999999999 6999999999999999999999
Q ss_pred EeCCCCCccccCCC-------------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRN-------------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~-------------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||++....... + . . .. +.++|||||||++|||+||.
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 224 (303)
T 2vwi_A 162 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA 224 (303)
T ss_dssp ECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCC
Confidence 99999886542210 0 0 1 33 88999999999999999984
No 234
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.96 E-value=3.7e-30 Score=267.61 Aligned_cols=181 Identities=20% Similarity=0.335 Sum_probs=150.0
Q ss_pred HHhcCCCCCCccccCCccceEEEEeC-CC-----cEEEEEEeecccC-CChHHHHHHHHHHhcC-CCcccceeeeEEEec
Q 006570 448 EATNNFDPTNLIGEGSQGQLYKGFLT-DG-----SRVSVKCLKLKQR-HLPQSLMQHVELLSKL-RHRHLVSILGHCILT 519 (640)
Q Consensus 448 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 519 (640)
...++|+..+.||+|+||.||+|+.. ++ ..||+|.++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-- 120 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT-- 120 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe--
Confidence 34567888999999999999999853 22 4799999975432 2346789999999999 8999999999884
Q ss_pred ccCCCCCCCeEEEEEEccCCCCHhHHhhccC-----------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCC
Q 006570 520 YQDHPNTGSTVFLVLEHISNGSLRDYLTDWK-----------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588 (640)
Q Consensus 520 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk 588 (640)
.+...++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+|||||
T Consensus 121 ------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlk 191 (333)
T 2i1m_A 121 ------HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVA 191 (333)
T ss_dssp ------SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCS
T ss_pred ------cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcc
Confidence 3455899999999999999997531 13468999999999999999999999 699999999
Q ss_pred CCceeecCCCceEEeCCCCCccccCCCC------------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 589 TENILLDKALTAKLSGYNIPLPSKVRNT------------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 589 ~~NILl~~~~~~kl~DfGla~~~~~~~~------------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|+||+++.++.+||+|||+++....... + +.. +.++|||||||++|||+| |
T Consensus 192 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 263 (333)
T 2i1m_A 192 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 263 (333)
T ss_dssp GGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred cceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999986532211 0 233 889999999999999998 5
No 235
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.96 E-value=1.3e-29 Score=265.15 Aligned_cols=179 Identities=13% Similarity=0.202 Sum_probs=150.9
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCC-----------------hHHHHHHHHHHhcCCCccccee
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHL-----------------PQSLMQHVELLSKLRHRHLVSI 512 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 512 (640)
.++|++.+.||+|+||.||+|+. +++.||||++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788899999999999999999 89999999997542211 1789999999999999999999
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhHH------hhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRDY------LTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
++++. ..+..++||||+++|+|.++ +.. .....+++..++.++.|++.||+|||+. .+|+|||
T Consensus 109 ~~~~~--------~~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~d 177 (348)
T 2pml_X 109 EGIIT--------NYDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRD 177 (348)
T ss_dssp SEEEE--------SSSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHT--SCEECCC
T ss_pred EEEEe--------eCCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhcc--CCEeecC
Confidence 99986 34568999999999999999 543 2256799999999999999999999972 5999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCCCCc---------------cC-C-CC-ccceehhhHHHHHHhhcC
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVRNTL---------------SF-H-TD-RSSLYKIILIICVITLCC 640 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~~~~---------------~~-~-~~-~~DvwS~Gvvl~elltG~ 640 (640)
|||+||+++.++.+||+|||++......... +. . +. ++|||||||++|||++|.
T Consensus 178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~ 249 (348)
T 2pml_X 178 VKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249 (348)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSS
T ss_pred CChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCC
Confidence 9999999999999999999999764322100 22 2 34 999999999999999984
No 236
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.96 E-value=1.9e-29 Score=261.69 Aligned_cols=182 Identities=18% Similarity=0.247 Sum_probs=150.4
Q ss_pred HHHhcCCCCC-CccccCCccceEEEEe-CCCcEEEEEEeeccc--CCChHHHHHHHHHHhcC-CCcccceeeeEEEeccc
Q 006570 447 EEATNNFDPT-NLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQ 521 (640)
Q Consensus 447 ~~~~~~~~~~-~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~ 521 (640)
+...+.|.+. +.||+|+||.||+|+. .+++.||+|+++... .....++.+|+.++..+ +||||+++++++.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~---- 99 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE---- 99 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE----
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE----
Confidence 3445566666 8899999999999995 468999999997543 23457899999999999 5699999999885
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---CC
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---AL 598 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~ 598 (640)
.....++||||+++|+|.+++.. .....+++..++.++.|++.||+|||+ .+|+||||||+||+++. ++
T Consensus 100 ----~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 100 ----NTSEIILILEYAAGGEIFSLCLP-ELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp ----CSSEEEEEEECCTTEEGGGGGSS-CC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBC
T ss_pred ----eCCeEEEEEEecCCCcHHHHHHH-hcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCC
Confidence 44568999999999999999864 234568999999999999999999999 69999999999999998 78
Q ss_pred ceEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++........ ... +.++|||||||++|||++|.
T Consensus 172 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~ 230 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHT 230 (327)
T ss_dssp CEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCC
Confidence 9999999999765432110 233 88999999999999999984
No 237
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.96 E-value=2.1e-29 Score=257.71 Aligned_cols=184 Identities=19% Similarity=0.333 Sum_probs=150.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEeccc-----CC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ-----DH 523 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~-----~~ 523 (640)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++||||+++++++..... +.
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 45688899999999999999995 578999999997432 234678999999999999999999998864210 11
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
.......++||||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHS--ENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHH--SCGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEEC
T ss_pred cccCCceEEEEecCCCCCHHHhhhc--cccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEe
Confidence 1235678999999999999999975 23457889999999999999999999 699999999999999999999999
Q ss_pred CCCCCccccCCC----------------------C--c-------c-CC-CCccceehhhHHHHHHhhc
Q 006570 604 GYNIPLPSKVRN----------------------T--L-------S-FH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 604 DfGla~~~~~~~----------------------~--~-------~-~~-~~~~DvwS~Gvvl~elltG 639 (640)
|||+++...... + . + .. +.++|||||||++|||+++
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p 227 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSC
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhc
Confidence 999997653210 0 0 2 23 8899999999999999874
No 238
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.96 E-value=2e-29 Score=271.28 Aligned_cols=177 Identities=17% Similarity=0.234 Sum_probs=147.1
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcC------CCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL------RHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~g~~~~~~~~ 522 (640)
..+|++.+.||+|+||+||+|+. .+++.||||+++... ...+++.+|+++++.+ +|+||+++++++.
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~----- 169 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT----- 169 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE-----
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc-----
Confidence 35688899999999999999984 458999999997432 2345677888888777 5779999999885
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc--e
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT--A 600 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~--~ 600 (640)
.....++||||++ |+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +
T Consensus 170 ---~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~v 241 (429)
T 3kvw_A 170 ---FRNHICMTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGI 241 (429)
T ss_dssp ---ETTEEEEEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCE
T ss_pred ---cCCeEEEEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcce
Confidence 3456899999996 6999999762 33458999999999999999999999 69999999999999999987 9
Q ss_pred EEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 601 KLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 601 kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 242 kL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~ 296 (429)
T 3kvw_A 242 KVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY 296 (429)
T ss_dssp EECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCC
Confidence 99999999765432211 334 89999999999999999984
No 239
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.96 E-value=2.2e-29 Score=265.30 Aligned_cols=180 Identities=17% Similarity=0.287 Sum_probs=149.8
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++||||+++++++.... .+..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~ 102 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT---IEQM 102 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS---TTTC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCC---cccc
Confidence 35788899999999999999984 4688999999974322 22367889999999999999999999885321 1233
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||++ |+|.+++.. ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 103 KDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp CCEEEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcc
Confidence 56899999997 599999964 358999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCC-----------c----------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNT-----------L----------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~-----------~----------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++....... . ... +.++|||||||++|||++|.
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 229 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSS
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCC
Confidence 976532210 0 233 88999999999999999984
No 240
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.96 E-value=2.4e-29 Score=256.63 Aligned_cols=177 Identities=16% Similarity=0.264 Sum_probs=145.6
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
..++|+..+.||+|+||.||+|+. .+++.||||++..... .+++.+|+++++.++|++++..++++.. .+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~-------~~ 77 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA-------EG 77 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEE-------ET
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecC-------CC
Confidence 346799999999999999999994 6789999998764432 3468899999999999998888887752 34
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~D 604 (640)
...++||||+ +|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||++ ++++.+||+|
T Consensus 78 ~~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 78 DYNVMVMELL-GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp TEEEEEEECC-CCBHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred CceEEEEEcc-CCCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEec
Confidence 5689999999 9999999974 23468999999999999999999999 699999999999999 7889999999
Q ss_pred CCCCccccCCCC---------------c---------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT---------------L---------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~---------------~---------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++....... . +.. +.++|||||||++|||++|.
T Consensus 152 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 212 (296)
T 4hgt_A 152 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS 212 (296)
T ss_dssp CTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred CccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCC
Confidence 999976533211 0 223 78999999999999999984
No 241
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.96 E-value=4.1e-28 Score=283.13 Aligned_cols=251 Identities=15% Similarity=0.114 Sum_probs=165.2
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChh-hhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRF-FTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVL 153 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~-~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 153 (640)
.+++.|+|++|.+++.. +..+.....|++|+|++|...+.+ |.+|.++++|++|+|++|.+++..|..|+++++|++|
T Consensus 24 ~~l~~LdLs~N~i~~i~-~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVT-ASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp TTCCEEEEESCCCCEEC-SSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCcCEEECCCCcCCccC-hhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 57888888888875432 222444577777777777555554 6677777777777777777777777777777777777
Q ss_pred EcccCcccccCCcc--ccCCCCCCEEEccCccCCccCCC--ccCcCcCCeeEccCCCCCCCCCCcc--------------
Q 006570 154 NISSNFIYGEIPME--ITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKFPSLS-------------- 215 (640)
Q Consensus 154 ~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~~-------------- 215 (640)
+|++|.+++.+|.. |.++++|++|+|++|.+++..+. |.++++|++|+|++|.+++..+..+
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 77777777666554 77777777777777777776542 6777777777777777654433210
Q ss_pred --------------------------------------------------------------------------------
Q 006570 216 -------------------------------------------------------------------------------- 215 (640)
Q Consensus 216 -------------------------------------------------------------------------------- 215 (640)
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence
Q ss_pred ---cccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCE
Q 006570 216 ---KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNF 292 (640)
Q Consensus 216 ---~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~ 292 (640)
++|+.|+|++|.+.+..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 23444444555555555555566666666666666666666666666666666666666666655666666666666
Q ss_pred EeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 293 VEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 293 L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
|++++|++++..|..|..+++|+.|++++|.+++
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 6666666665555566666666666666666654
No 242
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.96 E-value=4.6e-28 Score=272.79 Aligned_cols=251 Identities=20% Similarity=0.152 Sum_probs=134.0
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
.++.|++++|.+++.. +..+...+.|+.|+|++|.+. .+|..+.++++|++|+|++|.+.+..|..+..+++|++|++
T Consensus 255 ~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 332 (606)
T 3t6q_A 255 SVESINLQKHYFFNIS-SNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSI 332 (606)
T ss_dssp EEEEEECTTCCCSSCC-TTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEEC
T ss_pred ceeEEEeecCccCccC-HHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEEC
Confidence 4666666666653322 111223355566666665554 44555555666666666666665555555555555666666
Q ss_pred ccCcccccCCcc-ccCCCCCCEEEccCccCCccC--C-CccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcc
Q 006570 156 SSNFIYGEIPME-ITSLKNLKSIVLADNLLNGSV--P-DLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSL 228 (640)
Q Consensus 156 s~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~--~-~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l 228 (640)
++|.+.+.+|.. +.++++|++|++++|.+++.. + .+..+++|++|++++|++++..|.. +++|+.|++++|++
T Consensus 333 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 412 (606)
T 3t6q_A 333 KGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRL 412 (606)
T ss_dssp CSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCE
T ss_pred CCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcC
Confidence 655555544443 555555555555555555543 2 2555555555555555555444432 34555555555555
Q ss_pred cccCCcc-ccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCcc---CCccccCCCCCCEEeccCccCcccC
Q 006570 229 RSEIPSG-LKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA---LPVNISCSAKLNFVEISHNLLIGKL 304 (640)
Q Consensus 229 ~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~---~p~~~~~~~~L~~L~ls~N~l~~~~ 304 (640)
++..|.. +.++++|+.|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|+.|++++|++++..
T Consensus 413 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 492 (606)
T 3t6q_A 413 KVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSID 492 (606)
T ss_dssp ECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEEC
T ss_pred CCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccC
Confidence 5444332 55555555555555555555555555555555555555555441 1234555555555555555555555
Q ss_pred CCCccCCCCCceeeeccccccCcc
Q 006570 305 PSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 305 p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
|..+..+++|+.|++++|++++..
T Consensus 493 ~~~~~~l~~L~~L~Ls~N~l~~~~ 516 (606)
T 3t6q_A 493 QHAFTSLKMMNHVDLSHNRLTSSS 516 (606)
T ss_dssp TTTTTTCTTCCEEECCSSCCCGGG
T ss_pred hhhhccccCCCEEECCCCccCcCC
Confidence 555555555555555555555443
No 243
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.96 E-value=4.2e-29 Score=258.74 Aligned_cols=184 Identities=22% Similarity=0.372 Sum_probs=150.2
Q ss_pred HhcCCCCCCccccCCccceEEEEe--CCCcEEEEEEeecccC--CChHHHHHHHHHHhcC---CCcccceeeeEEEeccc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL--TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKL---RHRHLVSILGHCILTYQ 521 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~~~ 521 (640)
..++|+..+.||+|+||.||+|+. .+++.||+|+++.... .....+.+|+++++.+ +||||+++++++.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456789999999999999999996 4688999999975432 2234677788777766 89999999999863221
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceE
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAK 601 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~k 601 (640)
......++||||++ |+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 89 ---~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 89 ---DRETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp ---SSEEEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred ---CCCceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEE
Confidence 13456899999998 6999999753 33458999999999999999999999 6999999999999999999999
Q ss_pred EeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 602 LSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 602 l~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 161 l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 216 (326)
T 1blx_A 161 LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216 (326)
T ss_dssp ECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCC
Confidence 9999999765422110 233 88999999999999999984
No 244
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.96 E-value=5.5e-30 Score=268.60 Aligned_cols=173 Identities=19% Similarity=0.238 Sum_probs=144.0
Q ss_pred cCCCCCCccccCCccceEEEEeC---------CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccce----------
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT---------DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVS---------- 511 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 511 (640)
++|++.+.||+|+||.||+|+.. +++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 57888999999999999999965 3789999998743 46889999999999999998
Q ss_pred -----eeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 512 -----ILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 512 -----l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
+++++.. .+...++||||+ +|+|.+++... ....+++..++.++.|++.||+|||+ .+|+|||
T Consensus 117 ~~i~~~~~~~~~-------~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~D 184 (352)
T 2jii_A 117 LAIPTCMGFGVH-------QDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHE---NEYVHGN 184 (352)
T ss_dssp CSCCCCCEEEEE-------TTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSC
T ss_pred cCccchhhcccc-------CCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCC
Confidence 4555542 245689999999 99999999752 23569999999999999999999999 6999999
Q ss_pred CCCCceeecCCC--ceEEeCCCCCccccCCCC-----------------c-------cCC-CCccceehhhHHHHHHhhc
Q 006570 587 LKTENILLDKAL--TAKLSGYNIPLPSKVRNT-----------------L-------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 587 lk~~NILl~~~~--~~kl~DfGla~~~~~~~~-----------------~-------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|||+||+++.++ .+||+|||+++....... + +.. +.++|||||||++|||+||
T Consensus 185 ikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g 264 (352)
T 2jii_A 185 VTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYG 264 (352)
T ss_dssp CCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhC
Confidence 999999999998 999999999976532110 0 223 8899999999999999998
Q ss_pred C
Q 006570 640 C 640 (640)
Q Consensus 640 ~ 640 (640)
.
T Consensus 265 ~ 265 (352)
T 2jii_A 265 F 265 (352)
T ss_dssp C
T ss_pred C
Confidence 4
No 245
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.96 E-value=3.6e-29 Score=267.54 Aligned_cols=176 Identities=19% Similarity=0.274 Sum_probs=136.3
Q ss_pred CCC-CCccccCCccceEEEEeC---CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 453 FDP-TNLIGEGSQGQLYKGFLT---DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 453 ~~~-~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
|.. .+.||+|+||+||+|+.. +++.||||++... ...+.+.+|+++|++++||||+++++++... ...
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------~~~ 93 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSH------ADR 93 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEET------TTT
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecC------CCC
Confidence 444 568999999999999964 4788999999743 2346789999999999999999999998632 345
Q ss_pred eEEEEEEccCCCCHhHHhhccC------CCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee----cCCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWK------KKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL----DKAL 598 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl----~~~~ 598 (640)
..++||||+++ +|.+++.... ....+++..++.|+.|++.||+|||+ .+|+||||||+|||+ +.++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCC
Confidence 68999999974 8988886321 22358999999999999999999999 699999999999999 7779
Q ss_pred ceEEeCCCCCccccCCC-----------C--c-------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 599 TAKLSGYNIPLPSKVRN-----------T--L-------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 599 ~~kl~DfGla~~~~~~~-----------~--~-------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
.+||+|||+++...... + + + .. +.++|||||||++|||+||.
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~ 233 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSS
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCC
Confidence 99999999997654211 0 0 2 33 88999999999999999984
No 246
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.96 E-value=3.7e-29 Score=255.37 Aligned_cols=176 Identities=16% Similarity=0.253 Sum_probs=148.5
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ..+++.+|+++++.++|++++..++++.. .+.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~-------~~~ 78 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGA-------EGD 78 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEE-------ETT
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccC-------CCC
Confidence 46788899999999999999994 678999999987543 23578999999999999998888877652 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEEeCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKLSGY 605 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~Df 605 (640)
..++||||+ +|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||++ ++++.+||+||
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 79 YNVMVMELL-GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEEEEECC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred ceEEEEEec-CCCHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 689999999 8999999974 23468999999999999999999999 699999999999999 48899999999
Q ss_pred CCCccccCCCC----------c--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT----------L--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~----------~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... . +.. +.++|||||||++|||++|.
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 212 (296)
T 3uzp_A 153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS 212 (296)
T ss_dssp TTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred CCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCC
Confidence 99976543211 0 223 78999999999999999984
No 247
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.96 E-value=1.4e-29 Score=257.70 Aligned_cols=179 Identities=15% Similarity=0.223 Sum_probs=137.4
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.++...++.++||||+++++++. .
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~--------~ 77 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF--------R 77 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE--------C
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee--------c
Confidence 45788899999999999999995 57899999999754221 1233445555688889999999999986 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCC-CeeccCCCCCceeecCCCceEEeC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAP-GIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
+...++||||++ |+|.+++... .....+++..++.++.|++.||+|||+ . +|+||||||+||+++.++.+||+|
T Consensus 78 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~D 153 (290)
T 3fme_A 78 EGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCD 153 (290)
T ss_dssp SSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCC
T ss_pred cCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEee
Confidence 455899999997 5998887642 234679999999999999999999998 5 999999999999999999999999
Q ss_pred CCCCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ ... +.++|||||||++|||+||.
T Consensus 154 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~ 210 (290)
T 3fme_A 154 FGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210 (290)
T ss_dssp C---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTS
T ss_pred cCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCC
Confidence 9999764322110 122 77999999999999999984
No 248
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.96 E-value=1.4e-29 Score=262.72 Aligned_cols=179 Identities=17% Similarity=0.292 Sum_probs=144.4
Q ss_pred hcCCCCCCccccCCccceEEEEe------CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL------TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQD 522 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~ 522 (640)
.++|+..+.||+|+||.||+|+. .++..||||++.... .....++.+|+.++++++||||+++++++.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 103 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL----- 103 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEc-----
Confidence 46788899999999999999984 246789999996432 223467899999999999999999999885
Q ss_pred CCCCCCeEEEEEEccCCCCHhHHhhccCC----CCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC--
Q 006570 523 HPNTGSTVFLVLEHISNGSLRDYLTDWKK----KDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-- 596 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-- 596 (640)
.....++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 104 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~ 177 (327)
T 2yfx_A 104 ---QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPG 177 (327)
T ss_dssp ---SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSS
T ss_pred ---CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCC
Confidence 33457999999999999999986322 2458999999999999999999999 69999999999999984
Q ss_pred -CCceEEeCCCCCccccCCC----------C--c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 597 -ALTAKLSGYNIPLPSKVRN----------T--L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 597 -~~~~kl~DfGla~~~~~~~----------~--~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+..+||+|||+++...... + + +.. +.++|||||||++|||+| |
T Consensus 178 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 242 (327)
T 2yfx_A 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 242 (327)
T ss_dssp TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCC
Confidence 4569999999986432111 0 1 233 889999999999999998 6
No 249
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.7e-28 Score=251.87 Aligned_cols=204 Identities=20% Similarity=0.214 Sum_probs=191.6
Q ss_pred CCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeE
Q 006570 122 KLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELN 201 (640)
Q Consensus 122 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ 201 (640)
..++++.|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..++++++|++|+|++|.++..++.+.++++|++|+
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELS 156 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEE
Confidence 4688999999999996 78999999999999999999999 999999999999999999999996655699999999999
Q ss_pred ccCCCCCCCCCCc------------ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEE
Q 006570 202 LGGNDFGPKFPSL------------SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYL 269 (640)
Q Consensus 202 L~~N~l~~~~~~~------------~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 269 (640)
|++|++.+.+|.. +++|+.|+|++|+++ .+|..++++++|++|+|++|++++ +|..+..+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 9999998888863 679999999999999 889999999999999999999996 66679999999999
Q ss_pred EccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 270 NLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 270 ~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
+|++|++.+.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|++++|++.+..|
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP 294 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLP 294 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhcc
Confidence 999999999999999999999999999999999999999999999999999999998765
No 250
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.96 E-value=1.7e-29 Score=263.44 Aligned_cols=181 Identities=14% Similarity=0.251 Sum_probs=146.3
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHH-HhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVEL-LSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|+..+.||+|+||.||+|+. .+|+.||||+++.... ....++..|+.. ++.++||||+++++++.
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~-------- 120 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-------- 120 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEE--------
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEE--------
Confidence 346788889999999999999994 5789999999975432 223455556655 77889999999999986
Q ss_pred CCCeEEEEEEccCCCCHhHHhhcc-CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDW-KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....++||||+++ +|.+++... .....+++..++.++.|++.||+|||+. .+|+||||||+||+++.++.+||+|
T Consensus 121 ~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~D 197 (340)
T 3an0_A 121 REGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCD 197 (340)
T ss_dssp CSSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECC
T ss_pred eCCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEee
Confidence 33458999999975 999988642 1356799999999999999999999972 3999999999999999999999999
Q ss_pred CCCCccccCC-------CCc-------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVR-------NTL-------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~-------~~~-------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++..... .+. ... +.++|||||||++|||+||.
T Consensus 198 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~ 254 (340)
T 3an0_A 198 FGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 254 (340)
T ss_dssp CSHHHHHSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTS
T ss_pred CCCceecccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCC
Confidence 9998654321 000 123 78999999999999999984
No 251
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.96 E-value=1.8e-29 Score=256.96 Aligned_cols=176 Identities=19% Similarity=0.292 Sum_probs=140.1
Q ss_pred cCCCCCCccccCCccceEEEEeC--CCc--EEEEEEeeccc---CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT--DGS--RVSVKCLKLKQ---RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
++|+..+.||+|+||+||+|++. +++ .||||+++... ....+++.+|++++++++||||+++++++..
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 92 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT----- 92 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc-----
Confidence 56888899999999999999853 333 69999987542 2234678999999999999999999998841
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
...++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 93 ----~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~ 163 (291)
T 1u46_A 93 ----PPMKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIG 163 (291)
T ss_dssp ----SSCEEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEEC
T ss_pred ----CCceeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEc
Confidence 2278999999999999999752 3458899999999999999999999 699999999999999999999999
Q ss_pred CCCCCccccCCCC-------------c-------cCC-CCccceehhhHHHHHHhh-cC
Q 006570 604 GYNIPLPSKVRNT-------------L-------SFH-TDRSSLYKIILIICVITL-CC 640 (640)
Q Consensus 604 DfGla~~~~~~~~-------------~-------~~~-~~~~DvwS~Gvvl~ellt-G~ 640 (640)
|||+++....... + +.. +.++||||||+++|||++ |.
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~ 222 (291)
T 1u46_A 164 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222 (291)
T ss_dssp CCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred cccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999976543211 0 223 789999999999999998 63
No 252
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.95 E-value=2.9e-29 Score=267.23 Aligned_cols=181 Identities=18% Similarity=0.278 Sum_probs=148.3
Q ss_pred hcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC--------CcccceeeeEEEecc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR--------HRHLVSILGHCILTY 520 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~g~~~~~~ 520 (640)
.++|++.+.||+|+||+||+|+ ..+++.||||+++.. ....+.+.+|+++++.++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 3678899999999999999998 456889999999743 223467889999999985 788999999886332
Q ss_pred cCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCC-CeeccCCCCCceeecCCC-
Q 006570 521 QDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAP-GIFGNNLKTENILLDKAL- 598 (640)
Q Consensus 521 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NILl~~~~- 598 (640)
. .+...++||||+ +|++.+++.. .....+++..++.|+.|++.||+|||+ . +|+||||||+|||++.++
T Consensus 115 ~----~~~~~~lv~e~~-~~~l~~~~~~-~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~ 185 (397)
T 1wak_A 115 V----NGTHICMVFEVL-GHHLLKWIIK-SNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQ 185 (397)
T ss_dssp T----TEEEEEEEECCC-CCBHHHHHHH-TTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHH
T ss_pred C----CCceEEEEEecc-CccHHHHHHh-cccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccch
Confidence 1 345689999999 5677777754 233568999999999999999999998 5 899999999999999775
Q ss_pred ------------------------------------------------ceEEeCCCCCccccCCCCc-------------
Q 006570 599 ------------------------------------------------TAKLSGYNIPLPSKVRNTL------------- 617 (640)
Q Consensus 599 ------------------------------------------------~~kl~DfGla~~~~~~~~~------------- 617 (640)
.+||+|||+++........
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHH
T ss_pred hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhh
Confidence 7999999999765432211
Q ss_pred -cCC-CCccceehhhHHHHHHhhcC
Q 006570 618 -SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 618 -~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.. +.++|||||||++|||+||.
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~ 290 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGD 290 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCC
Confidence 334 88999999999999999984
No 253
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.95 E-value=8.1e-28 Score=270.77 Aligned_cols=252 Identities=18% Similarity=0.107 Sum_probs=216.4
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCcc-ccCCCCCCEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSK-INRFWSLEVL 153 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L 153 (640)
.+++.|++++|.++ .++. .....+.|++|++++|.+.+..|..+.++++|++|++++|.+.+.+|.. +..+++|++|
T Consensus 278 ~~L~~L~l~~n~l~-~lp~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L 355 (606)
T 3t6q_A 278 SGLQELDLTATHLS-ELPS-GLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLREL 355 (606)
T ss_dssp TTCSEEECTTSCCS-CCCS-SCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEE
T ss_pred cCCCEEeccCCccC-CCCh-hhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEE
Confidence 47888999999885 2322 1334578999999999998888888999999999999999998777754 8899999999
Q ss_pred EcccCcccccC--CccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc----ccccceeecccC
Q 006570 154 NISSNFIYGEI--PMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL----SKNIVSVILRNN 226 (640)
Q Consensus 154 ~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~----~~~L~~L~l~~N 226 (640)
+|++|.+.+.. |..+.++++|++|++++|.+++.+|. |..+++|++|+|++|++++..|.. +++|+.|++++|
T Consensus 356 ~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n 435 (606)
T 3t6q_A 356 DLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHS 435 (606)
T ss_dssp ECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTC
T ss_pred ECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCC
Confidence 99999998766 77899999999999999999988776 888999999999999988766542 688999999999
Q ss_pred cccccCCccccCCCCccEEEccCCcccCc---CCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCccc
Q 006570 227 SLRSEIPSGLKNFDQLKQFDISSNNFVGP---IQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 227 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~ 303 (640)
.+++..|..+..+++|++|+|++|++++. .+..+..+++|++|+|++|++++..|..|..+++|+.|++++|++++.
T Consensus 436 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 515 (606)
T 3t6q_A 436 LLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSS 515 (606)
T ss_dssp CCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGG
T ss_pred ccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcC
Confidence 99988888899999999999999999862 346788899999999999999998889999999999999999999999
Q ss_pred CCCCccCCCCCceeeeccccccCccC
Q 006570 304 LPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 304 ~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
.|..+..++.+ .+++++|.+++.++
T Consensus 516 ~~~~l~~l~~L-~L~L~~N~l~~~~~ 540 (606)
T 3t6q_A 516 SIEALSHLKGI-YLNLASNHISIILP 540 (606)
T ss_dssp GGGGGTTCCSC-EEECCSSCCCCCCG
T ss_pred ChhHhCccccc-EEECcCCcccccCH
Confidence 99999999999 99999999987654
No 254
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.95 E-value=6.1e-29 Score=262.55 Aligned_cols=180 Identities=14% Similarity=0.283 Sum_probs=144.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|...+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|+++++.++||||+++++++..... ...
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~~ 118 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS--LRN 118 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS--STT
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCC--ccc
Confidence 35788889999999999999984 56899999999754322 24678899999999999999999999853211 111
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||++ |+|.+++. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecC
Confidence 223499999997 59988873 348999999999999999999999 699999999999999999999999999
Q ss_pred CCccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++........ + .. +.++|||||||++|||+||.
T Consensus 190 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~ 239 (371)
T 4exu_A 190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239 (371)
T ss_dssp CC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred cccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCC
Confidence 99765432211 2 34 89999999999999999984
No 255
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.95 E-value=1.1e-28 Score=250.98 Aligned_cols=178 Identities=19% Similarity=0.319 Sum_probs=151.7
Q ss_pred HhcCCCCCCccccCCccceEEEEeC-CCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-------- 91 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-------- 91 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEE--------
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEe--------
Confidence 4467899999999999999999954 68999999997543 345678999999999999999999999885
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC---CceEE
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---LTAKL 602 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---~~~kl 602 (640)
.....++||||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.+ +.+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL 165 (287)
T 2wei_A 92 DSSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKI 165 (287)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CCCeEEEEEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEE
Confidence 34568999999999999999865 3458999999999999999999999 699999999999999764 47999
Q ss_pred eCCCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 603 SGYNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 603 ~DfGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+|||++......... ... +.++||||||+++|||++|.
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~ 219 (287)
T 2wei_A 166 IDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGT 219 (287)
T ss_dssp CSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eccCcceeecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCC
Confidence 999999765433211 233 88999999999999999984
No 256
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.95 E-value=1.1e-28 Score=268.33 Aligned_cols=176 Identities=18% Similarity=0.261 Sum_probs=144.9
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
.++|.+.+.||+|+||.||+|+. .+++.||||++..... .+++.+|+++++.++|++.+..+.++.. ...
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~-------~~~ 76 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGV-------EGD 76 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEE-------ETT
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEe-------eCC
Confidence 36789999999999999999994 6789999998875432 3468899999999988655555544431 345
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee---cCCCceEEeCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL---DKALTAKLSGY 605 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl---~~~~~~kl~Df 605 (640)
..++||||+ +|+|.+++.. ....+++.+++.|+.||+.||+|||+ .+||||||||+|||+ +.++.+||+||
T Consensus 77 ~~~lvme~~-g~sL~~ll~~--~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 77 YNVLVMDLL-GPSLEDLFNF--CSRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp EEEEEEECC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEEEEECC-CCCHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeC
Confidence 689999999 8999999974 24469999999999999999999999 799999999999999 68899999999
Q ss_pred CCCccccCCCC-----------------c-------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNT-----------------L-------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~-----------------~-------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++....... + +.. +.++|||||||++|||++|.
T Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~ 210 (483)
T 3sv0_A 151 GLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGS 210 (483)
T ss_dssp TTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred CcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence 99976543211 0 233 78999999999999999984
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=3e-28 Score=275.27 Aligned_cols=247 Identities=16% Similarity=0.172 Sum_probs=216.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccC-CCC-hhhhhhcCC------CCCcEeecccCcCcCCCCc--cc
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANF-NID-RFFTILTKL------SNLKVLSLVSLGLWGPLPS--KI 144 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~-~~~-~~~~~l~~l------~~L~~L~L~~n~l~~~~p~--~~ 144 (640)
.+++.|+|++|.+.+.++. .....+.|+.|+|++|. +.+ .+|..++++ ++|++|+|++|.++ .+|. .+
T Consensus 249 ~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l 326 (636)
T 4eco_A 249 KDLTDVEVYNCPNLTKLPT-FLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSL 326 (636)
T ss_dssp TTCCEEEEECCTTCSSCCT-TTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHH
T ss_pred CCCCEEEecCCcCCccChH-HHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhh
Confidence 5789999999998777653 24456899999999998 888 899988887 99999999999997 8998 99
Q ss_pred cCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCc-CCeeEccCCCCCCCCCCc-----cccc
Q 006570 145 NRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVL-LEELNLGGNDFGPKFPSL-----SKNI 218 (640)
Q Consensus 145 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~-----~~~L 218 (640)
+++++|++|+|++|.++|.+| .|+++++|++|+|++|+++..++.+.++++ |++|+|++|+++ .+|.. +++|
T Consensus 327 ~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L 404 (636)
T 4eco_A 327 QKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVM 404 (636)
T ss_dssp TTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCE
T ss_pred ccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCcc
Confidence 999999999999999999999 999999999999999999966666999999 999999999998 56654 3489
Q ss_pred ceeecccCcccccCCcccc-------CCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccc-cCC---
Q 006570 219 VSVILRNNSLRSEIPSGLK-------NFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI-SCS--- 287 (640)
Q Consensus 219 ~~L~l~~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~~--- 287 (640)
+.|++++|++++.+|..|. .+++|+.|+|++|++++..+..+..+++|++|+|++|+++. +|..+ ...
T Consensus 405 ~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~~~~~~ 483 (636)
T 4eco_A 405 SAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTE-IPKNSLKDENEN 483 (636)
T ss_dssp EEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSB-CCSSSSEETTEE
T ss_pred CEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCC-cCHHHhcccccc
Confidence 9999999999999999998 88899999999999996555556679999999999999984 55543 322
Q ss_pred ----CCCCEEeccCccCcccCCCCcc--CCCCCceeeeccccccCc
Q 006570 288 ----AKLNFVEISHNLLIGKLPSCIG--SNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 288 ----~~L~~L~ls~N~l~~~~p~~~~--~~~~l~~l~l~~N~l~~~ 327 (640)
++|+.|+|++|+++ .+|..+. .+++|+.|++++|++++.
T Consensus 484 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~i 528 (636)
T 4eco_A 484 FKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKF 528 (636)
T ss_dssp CTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSC
T ss_pred ccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCc
Confidence 28999999999999 7888887 999999999999999984
No 258
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.95 E-value=6.8e-30 Score=269.89 Aligned_cols=183 Identities=9% Similarity=0.033 Sum_probs=132.1
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC---CChHHHHHHH---HHHhcCCCcccceee-------eEE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR---HLPQSLMQHV---ELLSKLRHRHLVSIL-------GHC 516 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~---~~l~~l~h~niv~l~-------g~~ 516 (640)
.+|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+ +.|+. +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 3577889999999999999995 4789999999986432 2235677785 45555 799988755 333
Q ss_pred EecccC-------C--CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHH------HHHHHHHHHHhhhcccCCCCC
Q 006570 517 ILTYQD-------H--PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR------MAIIIGATRGVQFLHTGVAPG 581 (640)
Q Consensus 517 ~~~~~~-------~--~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~~L~yLH~~~~~~ 581 (640)
...... . .......++|||||+ |+|.+++... ...+.+..+ ..++.|++.||+|||+ .+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQS---KG 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHH---CC
Confidence 211110 0 001145899999999 8999999753 223456666 7888999999999998 79
Q ss_pred eeccCCCCCceeecCCCceEEeCCCCCccccCCC-Cc-------------c--CC-CCccceehhhHHHHHHhhcC
Q 006570 582 IFGNNLKTENILLDKALTAKLSGYNIPLPSKVRN-TL-------------S--FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 582 iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~~-~~-------------~--~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+||||||+|||++.++.+||+|||+++...... .. + .. +.++|||||||++|||+||.
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999998664332 10 2 33 89999999999999999984
No 259
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.95 E-value=5.8e-29 Score=260.73 Aligned_cols=180 Identities=17% Similarity=0.295 Sum_probs=149.2
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||++..... ....++.+|++++++++||||+++++++... .....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~~ 86 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPD---SFENF 86 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS---CSTTC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeeccc---ccCcc
Confidence 46788899999999999999995 4689999999964322 2345788999999999999999999987531 12234
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 66899999997 599999864 358999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCC------------------C--c--------cCC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRN------------------T--L--------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~------------------~--~--------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++...... + + ... +.++|||||||++|||++|.
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 220 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCC
Confidence 97653210 0 0 233 88999999999999999984
No 260
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.95 E-value=1.8e-28 Score=272.82 Aligned_cols=137 Identities=16% Similarity=0.021 Sum_probs=108.6
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
+++.|+|++|.+++.. +..+...+.|++|+|++|.+.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 27 ~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 27 AMKSLDLSFNKITYIG-HGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TCCEEECCSSCCCEEC-SSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CccEEECcCCccCccC-hhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 6889999999885433 222445578899999999888888888999999999999999998777777889999999999
Q ss_pred ccCcccc-cCCccccCCCCCCEEEccCccC-CccCCC-ccCcCcCCeeEccCCCCCCCCCC
Q 006570 156 SSNFIYG-EIPMEITSLKNLKSIVLADNLL-NGSVPD-LQRLVLLEELNLGGNDFGPKFPS 213 (640)
Q Consensus 156 s~N~l~~-~~p~~~~~l~~L~~L~L~~N~l-~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~ 213 (640)
++|.+++ .+|..++++++|++|++++|.+ ...++. |.++++|++|++++|++++..|.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 9999886 4577888888999999988884 444433 88888888888888888765553
No 261
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=3.7e-28 Score=268.38 Aligned_cols=126 Identities=17% Similarity=0.085 Sum_probs=63.6
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
+++.|+|++|.+++..+ ..+...+.|++|+|++|.+.+..|..|+++++|++|+|++|.++ .+|.. .+++|++|+|
T Consensus 22 ~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 22 KTTILNISQNYISELWT-SDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TCSEEECCSSCCCCCCH-HHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred cccEEECCCCcccccCh-hhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 45555555555432211 11222345555555555555555555555555555555555554 34433 4555555555
Q ss_pred ccCcccc-cCCccccCCCCCCEEEccCccCCccCCCccCcCcC--CeeEccCCCC
Q 006570 156 SSNFIYG-EIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLL--EELNLGGNDF 207 (640)
Q Consensus 156 s~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L--~~L~L~~N~l 207 (640)
++|.+++ .+|..|+++++|++|+|++|.+++ ..+..+++| ++|+|++|++
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK--SSVLPIAHLNISKVLLVLGET 150 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG--GGGGGGTTSCEEEEEEEECTT
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch--hhccccccceeeEEEeecccc
Confidence 5555554 345555555555555555555544 224444444 5555555555
No 262
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=6.4e-28 Score=269.09 Aligned_cols=242 Identities=18% Similarity=0.097 Sum_probs=171.5
Q ss_pred EEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEccc
Q 006570 78 TELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISS 157 (640)
Q Consensus 78 ~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 157 (640)
..+++++++++...... .+.++.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~ip~~~----~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTHVPKDL----PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCSCCTTS----CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCccCCCCC----CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 66788888775432211 26788888888888887778888888888888888888887788888888888888888
Q ss_pred CcccccCCccccCCCCCCEEEccCccCCccC-C-CccCcCcCCeeEccCCCCCCCCCCccccc--ceeecccCcc--ccc
Q 006570 158 NFIYGEIPMEITSLKNLKSIVLADNLLNGSV-P-DLQRLVLLEELNLGGNDFGPKFPSLSKNI--VSVILRNNSL--RSE 231 (640)
Q Consensus 158 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~L--~~L~l~~N~l--~~~ 231 (640)
|.|+ .+|.. .+++|++|+|++|++++.+ | .|.++++|++|+|++|++++.....+++| +.|++++|++ ++.
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~ 186 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGG 186 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSS
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeeccccccccc
Confidence 8888 67766 7888888888888888754 3 48888888888888888876444444555 7777777777 656
Q ss_pred CCccccCCC-----------------------------------------------------------------------
Q 006570 232 IPSGLKNFD----------------------------------------------------------------------- 240 (640)
Q Consensus 232 ~p~~~~~l~----------------------------------------------------------------------- 240 (640)
.|..+..+.
T Consensus 187 ~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~ 266 (562)
T 3a79_B 187 ETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCS 266 (562)
T ss_dssp SCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHH
T ss_pred CcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHH
Confidence 565554433
Q ss_pred ----------CccEEEccCCcccCcCCccc--------------------------------------------------
Q 006570 241 ----------QLKQFDISSNNFVGPIQSFL-------------------------------------------------- 260 (640)
Q Consensus 241 ----------~L~~L~Ls~N~l~~~~p~~~-------------------------------------------------- 260 (640)
+|++|++++|+++|.+|..+
T Consensus 267 ~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~ 346 (562)
T 3a79_B 267 VKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHM 346 (562)
T ss_dssp HHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCC
T ss_pred HHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccc
Confidence 56666666666666666544
Q ss_pred ---cCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcc--cCCCCccCCCCCceeeeccccccC
Q 006570 261 ---FSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG--KLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 261 ---~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~--~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
..+++|++|++++|++++.+|..+..+++|+.|++++|++++ .+|..+..+++|+.|++++|.+++
T Consensus 347 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 417 (562)
T 3a79_B 347 VCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNS 417 (562)
T ss_dssp CCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBS
T ss_pred cCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCC
Confidence 455666666666666666666666666666666666666664 223456666666666666666665
No 263
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.5e-27 Score=258.82 Aligned_cols=233 Identities=19% Similarity=0.127 Sum_probs=207.0
Q ss_pred cccEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCc
Q 006570 67 SLKIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG 135 (640)
Q Consensus 67 ~~gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 135 (640)
+..|.|.+ ..++.|+|++|.+++.. +..+...+.|+.|+|++|.+.+..+..|.++++|++|+|++|.
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQ-ADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEEC-TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceEC-HHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 34688864 26889999999985533 2334456899999999999999888999999999999999999
Q ss_pred CcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCc-cCCccCCC-ccCcCcCCeeEccCCCCCCCCCC
Q 006570 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN-LLNGSVPD-LQRLVLLEELNLGGNDFGPKFPS 213 (640)
Q Consensus 136 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~ 213 (640)
+++..+..|..+++|++|+|++|.|++..+..|.++++|+.|+|++| .+...++. |.++++|++|+|++|++++. |.
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~ 213 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PN 213 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CC
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-cc
Confidence 98777778999999999999999999777778999999999999994 55555554 99999999999999999865 44
Q ss_pred c--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCC
Q 006570 214 L--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLN 291 (640)
Q Consensus 214 ~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~ 291 (640)
. +++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..+..+++|+
T Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 293 (452)
T 3zyi_A 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLV 293 (452)
T ss_dssp CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCC
T ss_pred ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCC
Confidence 3 78999999999999999999999999999999999999999999999999999999999999988888899999999
Q ss_pred EEeccCccCc
Q 006570 292 FVEISHNLLI 301 (640)
Q Consensus 292 ~L~ls~N~l~ 301 (640)
.|+|++|.+.
T Consensus 294 ~L~L~~Np~~ 303 (452)
T 3zyi_A 294 ELHLHHNPWN 303 (452)
T ss_dssp EEECCSSCEE
T ss_pred EEEccCCCcC
Confidence 9999999886
No 264
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.95 E-value=8.8e-29 Score=279.42 Aligned_cols=177 Identities=17% Similarity=0.285 Sum_probs=148.2
Q ss_pred HhcCCCCCCccccCCccceEEEEeCC----CcEEEEEEeecccC-CChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTD----GSRVSVKCLKLKQR-HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
..++|+..+.||+|+||.||+|+... +..||||+++.... ...+.+.+|+.++++++||||+++++++.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------ 461 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 461 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC------
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe------
Confidence 44678888999999999999998532 45799999875322 23467899999999999999999999873
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
....++||||+++|+|.++++. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 462 ---~~~~~lv~E~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~ 533 (656)
T 2j0j_A 462 ---ENPVWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLG 533 (656)
T ss_dssp ---SSSCEEEEECCTTCBHHHHHHH--TTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEEC
T ss_pred ---cCceEEEEEcCCCCcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEE
Confidence 2347999999999999999975 23468999999999999999999999 699999999999999999999999
Q ss_pred CCCCCccccCCCC-----------c-------cCC-CCccceehhhHHHHHHhh-c
Q 006570 604 GYNIPLPSKVRNT-----------L-------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 604 DfGla~~~~~~~~-----------~-------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
|||+++....... + ... +.++|||||||++|||++ |
T Consensus 534 DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g 589 (656)
T 2j0j_A 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 589 (656)
T ss_dssp CCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred ecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcC
Confidence 9999987643221 0 233 889999999999999997 5
No 265
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.4e-27 Score=242.51 Aligned_cols=222 Identities=16% Similarity=0.071 Sum_probs=200.0
Q ss_pred cccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCc
Q 006570 103 SQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182 (640)
Q Consensus 103 ~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 182 (640)
..++.+++.+.. +|.. -.++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~-ip~~--~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVG--IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTT--CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcC--CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 456777776643 4443 3579999999999998877788999999999999999999888999999999999999999
Q ss_pred c-CCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC
Q 006570 183 L-LNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ 257 (640)
Q Consensus 183 ~-l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 257 (640)
. ++...|. +..+++|++|+|++|++++..|.. +++|++|++++|++++..+..|.++++|+.|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 8 8888665 999999999999999999887754 6899999999999998777789999999999999999998777
Q ss_pred ccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 258 SFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 258 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
..|..+++|++|+|++|++++..|..+..+++|+.|++++|++++..|..+..+++|+.+++++|.+...
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCC
Confidence 7899999999999999999998899999999999999999999987777899999999999999998764
No 266
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.95 E-value=1.1e-28 Score=258.86 Aligned_cols=179 Identities=14% Similarity=0.280 Sum_probs=144.8
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC--CChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+.+++.++||||+++++++..... ....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~~~ 101 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS--LRNF 101 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS--GGGC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccc--cccc
Confidence 5678889999999999999995 4689999999975322 224678899999999999999999998852111 0011
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...++||||++ |+|.+++. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeeccc
Confidence 23599999997 59988874 248999999999999999999999 6999999999999999999999999999
Q ss_pred CccccCCCCc--------------c-CC-CCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL--------------S-FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~--------------~-~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ + .. +.++|||||||++|||++|.
T Consensus 173 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~ 221 (353)
T 3coi_A 173 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221 (353)
T ss_dssp TTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred ccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCC
Confidence 9865432111 2 34 88999999999999999984
No 267
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.95 E-value=2.4e-29 Score=258.95 Aligned_cols=181 Identities=22% Similarity=0.282 Sum_probs=142.9
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC------CChHHHHHHHHHHhcC----CCcccceeee
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR------HLPQSLMQHVELLSKL----RHRHLVSILG 514 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~g 514 (640)
.+...++|++.+.||+|+||.||+|+. .+++.||||++..... .....+.+|++++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344567899999999999999999984 5688999999975432 1223456788888888 8999999999
Q ss_pred EEEecccCCCCCCCeEEEEEEc-cCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCcee
Q 006570 515 HCILTYQDHPNTGSTVFLVLEH-ISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENIL 593 (640)
Q Consensus 515 ~~~~~~~~~~~~~~~~~lv~Ey-~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NIL 593 (640)
++. ..+..++|||| +++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+
T Consensus 106 ~~~--------~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil 171 (312)
T 2iwi_A 106 WFE--------TQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENIL 171 (312)
T ss_dssp EC-------------CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEE
T ss_pred EEe--------cCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEE
Confidence 875 33457999999 789999999975 3458999999999999999999999 69999999999999
Q ss_pred ec-CCCceEEeCCCCCccccCCCCc---------------cCC--CCccceehhhHHHHHHhhcC
Q 006570 594 LD-KALTAKLSGYNIPLPSKVRNTL---------------SFH--TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 594 l~-~~~~~kl~DfGla~~~~~~~~~---------------~~~--~~~~DvwS~Gvvl~elltG~ 640 (640)
++ +++.+||+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 172 ~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 236 (312)
T 2iwi_A 172 IDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236 (312)
T ss_dssp EETTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred EeCCCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCC
Confidence 99 8899999999999765432211 122 45899999999999999985
No 268
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.95 E-value=1.2e-27 Score=273.12 Aligned_cols=251 Identities=16% Similarity=0.096 Sum_probs=207.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|++|.+++.. +..+...+.|++|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLP-AANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCC-GGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCcC-HHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 36899999999885533 22233458899999999999998899999999999999999999765555799999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc-----ccccceeecccCcc
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL-----SKNIVSVILRNNSL 228 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~-----~~~L~~L~l~~N~l 228 (640)
|++|.+++..|..|+++++|++|+|++|.+++.+|. +.++++|++|+|++|++++..+.. .++|+.|++++|++
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999977778899999999999999999998876 889999999999999998877653 37899999999999
Q ss_pred cccCCccccCC---------------------------CCccEEEccCCcccCcCCccccCCCC--CcEEEccCCcCCcc
Q 006570 229 RSEIPSGLKNF---------------------------DQLKQFDISSNNFVGPIQSFLFSLPS--ILYLNLAGNQLSEA 279 (640)
Q Consensus 229 ~~~~p~~~~~l---------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~l~~N~l~~~ 279 (640)
++..|..|..+ ++|+.|++++|++++..|..|..++. |+.|+|++|++++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 88888766544 45677788888888877888877754 88888888888887
Q ss_pred CCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 280 LPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 280 ~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
.|..|..+++|+.|++++|++++..|..+..+++|+.+++++|...+
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~ 310 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQ 310 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhc
Confidence 77888888888888888888888888777777777777777655443
No 269
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.95 E-value=1.7e-27 Score=269.04 Aligned_cols=158 Identities=20% Similarity=0.125 Sum_probs=121.2
Q ss_pred CCCCCCCC----CCCCCCCCCCcccEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCC
Q 006570 49 VLQGWTDW----TNFCYLPSSSSLKIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNI 113 (640)
Q Consensus 49 ~l~~W~~~----~~~C~~~~~~~~gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~ 113 (640)
.+++|+.+ -++|.+.. +...|.|.. ..++.|||++|.++. +++..+...+.|++|+|++|.+.
T Consensus 12 ~~~~~~~~~p~~~~~c~~~~-~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~i~ 89 (635)
T 4g8a_A 12 KLAAANSSIPESWEPCVEVV-PNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQ 89 (635)
T ss_dssp -------------CCSEEEE-TTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCC
T ss_pred hhhcccCCCCCCCCCccccC-CCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCcCC
Confidence 45555543 13564421 123578963 368999999999854 34444566789999999999998
Q ss_pred ChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCcc-CCC-c
Q 006570 114 DRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGS-VPD-L 191 (640)
Q Consensus 114 ~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~-~ 191 (640)
+..|.+|.+|++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|+++++|++|+|++|++++. .|. +
T Consensus 90 ~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~ 169 (635)
T 4g8a_A 90 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 169 (635)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGG
T ss_pred CcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhh
Confidence 88888999999999999999999877777899999999999999999977677799999999999999999875 344 7
Q ss_pred cCcCcCCeeEccCCCCC
Q 006570 192 QRLVLLEELNLGGNDFG 208 (640)
Q Consensus 192 ~~l~~L~~L~L~~N~l~ 208 (640)
..+++|++|+|++|+++
T Consensus 170 ~~l~~L~~L~L~~N~l~ 186 (635)
T 4g8a_A 170 SNLTNLEHLDLSSNKIQ 186 (635)
T ss_dssp GGCTTCCEEECCSSCCC
T ss_pred ccchhhhhhcccCcccc
Confidence 88899999999888764
No 270
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.95 E-value=9.4e-29 Score=274.84 Aligned_cols=185 Identities=17% Similarity=0.197 Sum_probs=151.5
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGS 528 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~~ 528 (640)
++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++||||+++++++... .....+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~--~~~~~~~ 91 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGL--QKLAPND 91 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTT--CCCCTTS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeeccc--ccccCCC
Confidence 6799999999999999999995 568999999987532 22346789999999999999999999986421 1112356
Q ss_pred eEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCc---eEEeCC
Q 006570 529 TVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALT---AKLSGY 605 (640)
Q Consensus 529 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~---~kl~Df 605 (640)
..++||||+++|+|.+++........+++..++.++.+++.||+|||+ .+|+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccc
Confidence 679999999999999999865555579999999999999999999999 69999999999999997764 999999
Q ss_pred CCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 606 NIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|+++........ +.. +.++|||||||++|||++|.
T Consensus 169 G~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~ 220 (676)
T 3qa8_A 169 GYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF 220 (676)
T ss_dssp CCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSC
T ss_pred ccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCC
Confidence 999875432210 234 88999999999999999984
No 271
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.95 E-value=1.1e-28 Score=256.50 Aligned_cols=177 Identities=18% Similarity=0.257 Sum_probs=147.4
Q ss_pred hcCCCCCCccccCCccceEEEEe--CCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcc------cceeeeEEEeccc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL--TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH------LVSILGHCILTYQ 521 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~g~~~~~~~ 521 (640)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+++++.++|++ ++++++++.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~---- 87 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE---- 87 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE----
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc----
Confidence 35788899999999999999985 368899999997432 23467889999999887665 899999875
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-----
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK----- 596 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~----- 596 (640)
.....++||||+ +|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 88 ----~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~ 158 (339)
T 1z57_A 88 ----HHGHICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTE 158 (339)
T ss_dssp ----ETTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEE
T ss_pred ----cCCcEEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEecccccc
Confidence 345689999999 88999999762 33468999999999999999999999 69999999999999987
Q ss_pred --------------CCceEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 597 --------------ALTAKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 597 --------------~~~~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++.+||+|||+++........ +.. +.++|||||||++|||++|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 231 (339)
T 1z57_A 159 AYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF 231 (339)
T ss_dssp EEC----CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred ccCCccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCC
Confidence 668999999999765432211 334 89999999999999999984
No 272
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.95 E-value=6.7e-29 Score=256.39 Aligned_cols=179 Identities=18% Similarity=0.328 Sum_probs=144.9
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCC
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDH 523 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~ 523 (640)
.....++|+..+.||+|+||.||+|+... .||+|+++... ....+.+.+|++++++++||||+++++++.
T Consensus 28 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 99 (319)
T 2y4i_B 28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM------ 99 (319)
T ss_dssp SSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE------
T ss_pred ccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe------
Confidence 33445788999999999999999999753 59999987542 233456889999999999999999999986
Q ss_pred CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEe
Q 006570 524 PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLS 603 (640)
Q Consensus 524 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~ 603 (640)
.....++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++ ++.+||+
T Consensus 100 --~~~~~~iv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~ 171 (319)
T 2y4i_B 100 --SPPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVIT 171 (319)
T ss_dssp --CSSCEEEECBCCCSEEHHHHTTS--SCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEEC
T ss_pred --cCCceEEEeecccCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEe
Confidence 33458999999999999999974 34468999999999999999999999 6999999999999998 6799999
Q ss_pred CCCCCccccCCC-------------C--c------c----------CC-CCccceehhhHHHHHHhhcC
Q 006570 604 GYNIPLPSKVRN-------------T--L------S----------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 604 DfGla~~~~~~~-------------~--~------~----------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
|||+++...... + + . .. +.++|||||||++|||++|.
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 240 (319)
T 2y4i_B 172 DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE 240 (319)
T ss_dssp CCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSS
T ss_pred ecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCC
Confidence 999976542110 0 0 1 12 77899999999999999984
No 273
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=3.5e-27 Score=254.97 Aligned_cols=233 Identities=18% Similarity=0.120 Sum_probs=206.1
Q ss_pred cccEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCc
Q 006570 67 SLKIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG 135 (640)
Q Consensus 67 ~~gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 135 (640)
+..|.|.+ ..++.|+|++|.++... +..+.....|+.|+|++|.+.+..+..|.++++|++|+|++|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIK-VNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEEC-TTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeC-HHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 34688864 35788999999885433 2334556899999999999998888999999999999999999
Q ss_pred CcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCcc-CCccCCC-ccCcCcCCeeEccCCCCCCCCCC
Q 006570 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL-LNGSVPD-LQRLVLLEELNLGGNDFGPKFPS 213 (640)
Q Consensus 136 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~ 213 (640)
+++..+..|..+++|++|+|++|.|++..+..|.++++|++|+|++|. +....+. |.++++|++|+|++|+++.. |.
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~ 202 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PN 202 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-CC
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-cc
Confidence 987767789999999999999999997777789999999999999954 5555554 99999999999999999854 44
Q ss_pred c--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCC
Q 006570 214 L--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLN 291 (640)
Q Consensus 214 ~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~ 291 (640)
. +++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+
T Consensus 203 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 282 (440)
T 3zyj_A 203 LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLE 282 (440)
T ss_dssp CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCC
T ss_pred cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCC
Confidence 4 78999999999999999999999999999999999999999999999999999999999999998888899999999
Q ss_pred EEeccCccCc
Q 006570 292 FVEISHNLLI 301 (640)
Q Consensus 292 ~L~ls~N~l~ 301 (640)
.|+|++|.+.
T Consensus 283 ~L~L~~Np~~ 292 (440)
T 3zyj_A 283 RIHLHHNPWN 292 (440)
T ss_dssp EEECCSSCEE
T ss_pred EEEcCCCCcc
Confidence 9999999986
No 274
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.95 E-value=7e-29 Score=256.61 Aligned_cols=180 Identities=19% Similarity=0.272 Sum_probs=150.0
Q ss_pred HHHhcCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccCC------ChHHHHHHHHHHhcCC--CcccceeeeEEE
Q 006570 447 EEATNNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQRH------LPQSLMQHVELLSKLR--HRHLVSILGHCI 517 (640)
Q Consensus 447 ~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~g~~~ 517 (640)
....++|+..+.||+|+||.||+|+ ..+++.||||+++..... ..+.+.+|++++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 3445779999999999999999998 457899999999764321 2356778999999996 599999999985
Q ss_pred ecccCCCCCCCeEEEEEEccCC-CCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec-
Q 006570 518 LTYQDHPNTGSTVFLVLEHISN-GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD- 595 (640)
Q Consensus 518 ~~~~~~~~~~~~~~lv~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~- 595 (640)
.....++||||+.+ ++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++
T Consensus 119 --------~~~~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~ 184 (320)
T 3a99_A 119 --------RPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDL 184 (320)
T ss_dssp --------CSSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEET
T ss_pred --------cCCcEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeC
Confidence 34568999999976 899999975 3468999999999999999999999 7999999999999999
Q ss_pred CCCceEEeCCCCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 596 KALTAKLSGYNIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ~~~~~kl~DfGla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+++.+||+|||+++........ ... +.++|||||||++|||+||.
T Consensus 185 ~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~ 246 (320)
T 3a99_A 185 NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 246 (320)
T ss_dssp TTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCC
Confidence 7799999999999765432211 222 67889999999999999984
No 275
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.95 E-value=2.7e-28 Score=252.94 Aligned_cols=178 Identities=16% Similarity=0.233 Sum_probs=142.2
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccC-CChHHHHHHHH-HHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQR-HLPQSLMQHVE-LLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|...+.||+|+||.||+|+. .+|+.||||+++.... ....++..|+. +++.++||||+++++++. ..
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~--------~~ 93 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF--------RE 93 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE--------CS
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE--------eC
Confidence 6788899999999999999996 4689999999975422 22345556665 777889999999999986 34
Q ss_pred CeEEEEEEccCCCCHhHHhhcc--CCCCCCCHHHHHHHHHHHHHHhhhcccCCCC-CeeccCCCCCceeecCCCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDW--KKKDMLKWPQRMAIIIGATRGVQFLHTGVAP-GIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
...++||||+++ +|.+++... .....+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~D 169 (327)
T 3aln_A 94 GDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCD 169 (327)
T ss_dssp SEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECC
T ss_pred CceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEcc
Confidence 568999999985 888887531 224678999999999999999999998 5 999999999999999999999999
Q ss_pred CCCCccccCCCCc--------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL--------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~--------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ +.. +.++|||||||++|||++|.
T Consensus 170 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~ 226 (327)
T 3aln_A 170 FGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226 (327)
T ss_dssp CSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSC
T ss_pred CCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCC
Confidence 9999765322110 122 78999999999999999984
No 276
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.95 E-value=2.2e-28 Score=254.73 Aligned_cols=179 Identities=16% Similarity=0.280 Sum_probs=140.2
Q ss_pred hcCCCCC-CccccCCccceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 450 TNNFDPT-NLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 450 ~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
.++|.+. +.||+|+||+||+|+.. +++.||||++... .....+....++.++||||+++++++..... .+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~----~~ 98 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHH----GK 98 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET----TE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccC----CC
Confidence 4577774 46999999999999954 6899999999642 2222333334566799999999998863221 24
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC---CCceEEeC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK---ALTAKLSG 604 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~---~~~~kl~D 604 (640)
...++||||+++|+|.+++... ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEec
Confidence 5589999999999999999752 33569999999999999999999999 69999999999999976 45699999
Q ss_pred CCCCccccCCCCc---------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNTL---------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~~---------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++........ ... +.++|||||||++|||++|.
T Consensus 175 fg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 226 (336)
T 3fhr_A 175 FGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGF 226 (336)
T ss_dssp CTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCC
Confidence 9999765432111 223 78999999999999999984
No 277
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=7.7e-28 Score=265.83 Aligned_cols=243 Identities=18% Similarity=0.158 Sum_probs=194.0
Q ss_pred EEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccC
Q 006570 79 ELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSN 158 (640)
Q Consensus 79 ~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N 158 (640)
.+++++++++..... + ...++.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 4 ~l~ls~n~l~~ip~~---~-~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 4 LVDRSKNGLIHVPKD---L-SQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp EEECTTSCCSSCCCS---C-CTTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred eEecCCCCccccccc---c-cccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 578888888642211 1 278999999999999888889999999999999999998888999999999999999999
Q ss_pred cccccCCccccCCCCCCEEEccCccCCcc-CC-CccCcCcCCeeEccCCCCCCCCCCccccc--ceeecccCcc--cccC
Q 006570 159 FIYGEIPMEITSLKNLKSIVLADNLLNGS-VP-DLQRLVLLEELNLGGNDFGPKFPSLSKNI--VSVILRNNSL--RSEI 232 (640)
Q Consensus 159 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~L--~~L~l~~N~l--~~~~ 232 (640)
+|+ .+|.. .+++|++|+|++|++++. +| .|+++++|++|+|++|++++.....+++| +.|++++|.+ .+..
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~ 156 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKED 156 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCC
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccc
Confidence 999 67766 899999999999999984 45 49999999999999999986443345555 6777777766 5555
Q ss_pred CccccCCC------------------------------------------------------------------------
Q 006570 233 PSGLKNFD------------------------------------------------------------------------ 240 (640)
Q Consensus 233 p~~~~~l~------------------------------------------------------------------------ 240 (640)
|..+..+.
T Consensus 157 ~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~ 236 (520)
T 2z7x_B 157 PEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNS 236 (520)
T ss_dssp TTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHH
T ss_pred cccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHH
Confidence 55554432
Q ss_pred -----------CccEEEccCCcccCcCCccc-------------------------------------------------
Q 006570 241 -----------QLKQFDISSNNFVGPIQSFL------------------------------------------------- 260 (640)
Q Consensus 241 -----------~L~~L~Ls~N~l~~~~p~~~------------------------------------------------- 260 (640)
+|+.|++++|+++|.+|..+
T Consensus 237 ~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~ 316 (520)
T 2z7x_B 237 FIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVH 316 (520)
T ss_dssp HHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCC
T ss_pred HHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCcccc
Confidence 56666666666665555544
Q ss_pred ----cCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcc--cCCCCccCCCCCceeeeccccccCcc
Q 006570 261 ----FSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG--KLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 261 ----~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~--~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
..+++|++|++++|++++.+|..+..+++|+.|++++|++++ .+|..+..+++|+.|++++|.+++..
T Consensus 317 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l 390 (520)
T 2z7x_B 317 MLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDE 390 (520)
T ss_dssp CCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCG
T ss_pred ccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccc
Confidence 567888899999999988888888889999999999999886 56677888889999999999888743
No 278
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.95 E-value=2.7e-28 Score=258.73 Aligned_cols=180 Identities=22% Similarity=0.244 Sum_probs=146.0
Q ss_pred HhcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-Cc-----ccceeeeEEEeccc
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HR-----HLVSILGHCILTYQ 521 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~g~~~~~~~ 521 (640)
..++|++.+.||+|+||+||+|+. .+++.||||+++... ...+++.+|+++++.++ |+ +|+++++++.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~---- 126 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM---- 126 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE----
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec----
Confidence 356888999999999999999985 468899999997432 23466778888888874 44 4899998885
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeec--CCCc
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLD--KALT 599 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~--~~~~ 599 (640)
.....++||||++ |+|.+++... ....+++..+..++.|++.||+|||.+ ..+|+||||||+|||++ .++.
T Consensus 127 ----~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~ 199 (382)
T 2vx3_A 127 ----FRNHLCLVFEMLS-YNLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSA 199 (382)
T ss_dssp ----ETTEEEEEEECCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCC
T ss_pred ----cCCceEEEEecCC-CCHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCc
Confidence 2356899999996 5999999763 234689999999999999999999952 26899999999999994 4788
Q ss_pred eEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 600 AKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 600 ~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+||+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 200 ~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 255 (382)
T 2vx3_A 200 IKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255 (382)
T ss_dssp EEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 999999999765432211 334 89999999999999999984
No 279
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=2.9e-28 Score=280.92 Aligned_cols=225 Identities=21% Similarity=0.236 Sum_probs=203.3
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeec-ccCcCcCC---------------------------------------
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSL-VSLGLWGP--------------------------------------- 139 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L-~~n~l~~~--------------------------------------- 139 (640)
..++.|+|++|.+.|.+|++|++|++|++|+| ++|.++|.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 36888999999999999999999999999999 77765554
Q ss_pred -------------------------------------CCccccCCCCCCEEEcccCcccc-----------------cCC
Q 006570 140 -------------------------------------LPSKINRFWSLEVLNISSNFIYG-----------------EIP 165 (640)
Q Consensus 140 -------------------------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p 165 (640)
+|..|+++++|++|+|++|.|+| .+|
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP 482 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN 482 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCC
Confidence 88889999999999999999998 399
Q ss_pred cccc--CCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCC-CCC-CCCCc---c-------cccceeecccCcccc
Q 006570 166 MEIT--SLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGND-FGP-KFPSL---S-------KNIVSVILRNNSLRS 230 (640)
Q Consensus 166 ~~~~--~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~-l~~-~~~~~---~-------~~L~~L~l~~N~l~~ 230 (640)
..++ ++++|++|+|++|.+.+.+|. |.++++|++|+|++|+ +++ .+|.. + ++|+.|+|++|+++
T Consensus 483 ~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~- 561 (876)
T 4ecn_A 483 EELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE- 561 (876)
T ss_dssp SCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-
T ss_pred hhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-
Confidence 9988 999999999999999998887 9999999999999998 887 66653 2 48999999999999
Q ss_pred cCCc--cccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCC-CCEEeccCccCcccCCCC
Q 006570 231 EIPS--GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAK-LNFVEISHNLLIGKLPSC 307 (640)
Q Consensus 231 ~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~-L~~L~ls~N~l~~~~p~~ 307 (640)
.+|. .|+++++|+.|+|++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+|..
T Consensus 562 ~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~ 637 (876)
T 4ecn_A 562 EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNI 637 (876)
T ss_dssp BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSC
T ss_pred ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchh
Confidence 8888 8999999999999999999 788 8999999999999999998 78988999998 999999999999 78988
Q ss_pred ccCCCC--CceeeeccccccCccC
Q 006570 308 IGSNSL--NRTVVSTWNCLSGVNT 329 (640)
Q Consensus 308 ~~~~~~--l~~l~l~~N~l~~~~~ 329 (640)
+...+. |+.|++++|.++|.+|
T Consensus 638 ~~~~~~~~L~~L~Ls~N~l~g~ip 661 (876)
T 4ecn_A 638 FNAKSVYVMGSVDFSYNKIGSEGR 661 (876)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTSS
T ss_pred hhccccCCCCEEECcCCcCCCccc
Confidence 887765 9999999999998654
No 280
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.95 E-value=1.6e-28 Score=259.32 Aligned_cols=180 Identities=14% Similarity=0.223 Sum_probs=148.4
Q ss_pred cCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-----------CcccceeeeEEEe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-----------HRHLVSILGHCIL 518 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~g~~~~ 518 (640)
++|++.+.||+|+||+||+|+. .+++.||||++.... ...+.+.+|++++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5688899999999999999994 578999999997432 23467889999998886 8999999999864
Q ss_pred cccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCC-CeeccCCCCCceeec--
Q 006570 519 TYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAP-GIFGNNLKTENILLD-- 595 (640)
Q Consensus 519 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiHrDlk~~NILl~-- 595 (640)
... .+...++||||+ +++|.+++... ....+++..+..++.|++.||+|||+ . +|+||||||+|||++
T Consensus 98 ~~~----~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 98 KGP----NGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EET----TEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEE
T ss_pred cCC----CCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEecc
Confidence 321 234689999999 88999999763 23458999999999999999999998 5 999999999999994
Q ss_pred ----CCCceEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 596 ----KALTAKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 596 ----~~~~~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
..+.+||+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 232 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred CCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCC
Confidence 4458999999999765432211 334 89999999999999999984
No 281
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.95 E-value=3.4e-28 Score=250.59 Aligned_cols=176 Identities=19% Similarity=0.282 Sum_probs=145.9
Q ss_pred HhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--CChHHHHHHHHHHhcCC--CcccceeeeEEEecccCCC
Q 006570 449 ATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--HLPQSLMQHVELLSKLR--HRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 449 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~~~ 524 (640)
..++|++.+.||+|+||.||+|+..+++.||||++..... ...+.+.+|++++++++ ||||+++++++.
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~------- 98 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI------- 98 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE-------
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee-------
Confidence 3466888999999999999999988899999999975432 23467899999999997 599999999886
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeC
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSG 604 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~D 604 (640)
.....++||| +.+|+|.+++.. ...+++..++.++.|+++||+|||+ .+|+||||||+||++++ +.+||+|
T Consensus 99 -~~~~~~lv~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~D 169 (313)
T 3cek_A 99 -TDQYIYMVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLID 169 (313)
T ss_dssp -CSSEEEEEEC-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECC
T ss_pred -cCCEEEEEEe-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEee
Confidence 3456899999 557899999975 3468999999999999999999999 69999999999999965 8999999
Q ss_pred CCCCccccCCCC----------c---------c-----------CC-CCccceehhhHHHHHHhhcC
Q 006570 605 YNIPLPSKVRNT----------L---------S-----------FH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 605 fGla~~~~~~~~----------~---------~-----------~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
||+++....... . + .. +.++|||||||++|||++|.
T Consensus 170 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 236 (313)
T 3cek_A 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236 (313)
T ss_dssp CSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSS
T ss_pred ccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCC
Confidence 999976532211 0 1 13 77999999999999999984
No 282
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=3.1e-27 Score=265.21 Aligned_cols=246 Identities=17% Similarity=0.127 Sum_probs=206.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|++|.+++.. +..+...+.|+.|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEID-TYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEEC-TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCC-hHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 46889999999886433 22344568999999999999998888999999999999999999866556679999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCc-------------------------------------Cc
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRL-------------------------------------VL 196 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l-------------------------------------~~ 196 (640)
|++|.+++..|..|.++++|++|+|++|.+++.... +.++ ++
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~ 233 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVE 233 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCC
Confidence 999999988888999999999999999999876432 2111 23
Q ss_pred CCeeEccCCCCCCCCCC--cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCC
Q 006570 197 LEELNLGGNDFGPKFPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274 (640)
Q Consensus 197 L~~L~L~~N~l~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 274 (640)
|+.|+|++|.+++. +. .+++|+.|+|++|.+++.+|..|+++++|+.|+|++|++++ +|..+..+++|+.|+|++|
T Consensus 234 L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N 311 (597)
T 3oja_B 234 LTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHN 311 (597)
T ss_dssp CCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSS
T ss_pred CCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCC
Confidence 55556666666553 22 26899999999999999999999999999999999999996 5777888999999999999
Q ss_pred cCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 275 QLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 275 ~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
++++ +|..+..+++|+.|+|++|+|++. | +..+++|+.|++++|.+++.
T Consensus 312 ~l~~-i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 312 HLLH-VERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CCCC-CGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCc-cCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 9985 788889999999999999999865 3 66778999999999998864
No 283
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=5e-27 Score=249.65 Aligned_cols=247 Identities=16% Similarity=0.104 Sum_probs=205.2
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|+++.++.. ++..+.....|++|+|++|.+.+..|..|+++++|++|+|++|.++...+..|.++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEI-DTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEE-CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCccccc-ChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 4688999999988543 222344568999999999999998889999999999999999999754445579999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcC-------------------cCCeeEccCCCCCCCCCCcc
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLV-------------------LLEELNLGGNDFGPKFPSLS 215 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~-------------------~L~~L~L~~N~l~~~~~~~~ 215 (640)
|++|.+++..|..|.++++|++|++++|++++... ..++ +|++|++++|+++......+
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~ 225 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVN 225 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCG--GGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcccc--ccccccceeecccccccccCCCCcceEEECCCCeeeecccccc
Confidence 99999998888889999999999999999987642 3333 45556666666654444446
Q ss_pred cccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEec
Q 006570 216 KNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEI 295 (640)
Q Consensus 216 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l 295 (640)
++|+.|++++|++++. ..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++ +|..+..+++|+.|++
T Consensus 226 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L 302 (390)
T 3o6n_A 226 VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 302 (390)
T ss_dssp SSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEEC
T ss_pred ccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEEC
Confidence 7899999999999864 578899999999999999998889999999999999999999977 6767788899999999
Q ss_pred cCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 296 SHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 296 s~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
++|+++ .+|..+..+++|+.|++++|.++..+
T Consensus 303 ~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~ 334 (390)
T 3o6n_A 303 SHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK 334 (390)
T ss_dssp CSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC
T ss_pred CCCcce-ecCccccccCcCCEEECCCCccceeC
Confidence 999998 56777888899999999999988753
No 284
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=2.7e-29 Score=261.57 Aligned_cols=182 Identities=13% Similarity=0.164 Sum_probs=142.5
Q ss_pred hcCCCCCCccccCCccceEEEEeCCCcEEEEEEeeccc--------CCChHHHHHHHHHHhcCC---------Cccccee
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQ--------RHLPQSLMQHVELLSKLR---------HRHLVSI 512 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l 512 (640)
.++|+..+.||+|+||+||+|+. +|+.||||+++... ....+.+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35677889999999999999998 68999999997643 223478899999998886 7777777
Q ss_pred eeEEEecccCC----------------------CCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 006570 513 LGHCILTYQDH----------------------PNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRG 570 (640)
Q Consensus 513 ~g~~~~~~~~~----------------------~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~ 570 (640)
.+++......+ .......|+||||+++|++.+.+.+ ..+++..++.|+.|++.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 77654221100 0125679999999999987777642 458999999999999999
Q ss_pred hhhcc-cCCCCCeeccCCCCCceeecCCC--------------------ceEEeCCCCCccccCCCC------c-----c
Q 006570 571 VQFLH-TGVAPGIFGNNLKTENILLDKAL--------------------TAKLSGYNIPLPSKVRNT------L-----S 618 (640)
Q Consensus 571 L~yLH-~~~~~~iiHrDlk~~NILl~~~~--------------------~~kl~DfGla~~~~~~~~------~-----~ 618 (640)
|+||| + .+|+||||||+|||++.++ .+||+|||+|+....... . .
T Consensus 174 L~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 174 LAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGC
T ss_pred HHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhc
Confidence 99999 7 6999999999999999887 899999999987543211 0 2
Q ss_pred CC-CCccceehhhHH-HHHHhhc
Q 006570 619 FH-TDRSSLYKIILI-ICVITLC 639 (640)
Q Consensus 619 ~~-~~~~DvwS~Gvv-l~elltG 639 (640)
.. +.++||||+|++ .+++++|
T Consensus 251 g~~~~~~Diwsl~~~~~~~~~~g 273 (336)
T 2vuw_A 251 GDGDYQFDIYRLMKKENNNRWGE 273 (336)
T ss_dssp CCSSHHHHHHHHHHHHHTTCTTS
T ss_pred CCCccceehhhhhCCCCcccccc
Confidence 23 889999998877 6666655
No 285
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.95 E-value=1.4e-28 Score=280.05 Aligned_cols=178 Identities=21% Similarity=0.283 Sum_probs=145.0
Q ss_pred cCCCCCCccccCCccceEEEEeC--CCcEEEEEEeeccc-CCChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCCC
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLT--DGSRVSVKCLKLKQ-RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~~ 527 (640)
++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++..... ...
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~---~~~ 156 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR---HGD 156 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT---TSC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC---CCC
Confidence 67889999999999999999964 58999999986432 2234578899999999999999999999864321 112
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCC
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNI 607 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGl 607 (640)
...|+||||+++++|.+++.. .+++.+++.|+.|++.||+|||+ .+|+||||||+|||++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEeccc
Confidence 236999999999999988742 68999999999999999999999 699999999999999886 899999999
Q ss_pred CccccCCCCc-------------cCCCCccceehhhHHHHHHhhcC
Q 006570 608 PLPSKVRNTL-------------SFHTDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 608 a~~~~~~~~~-------------~~~~~~~DvwS~Gvvl~elltG~ 640 (640)
++........ +..+.++|||||||++|||++|.
T Consensus 228 a~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~ 273 (681)
T 2pzi_A 228 VSRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDL 273 (681)
T ss_dssp CEETTCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCC
T ss_pred chhcccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCC
Confidence 9866433211 12277999999999999999873
No 286
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=6e-27 Score=236.00 Aligned_cols=212 Identities=21% Similarity=0.222 Sum_probs=115.5
Q ss_pred CCCCCCCCCCcccEEeCC-CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCc
Q 006570 57 TNFCYLPSSSSLKIVCTN-SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG 135 (640)
Q Consensus 57 ~~~C~~~~~~~~gv~C~~-~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~ 135 (640)
.+.|.|. |+.|+. ..++.+++++++++.. |..+. ++|+.|+|++|.
T Consensus 2 ~~~C~~~-----~~~C~c~~~~~~l~~~~~~l~~i--------------------------p~~~~--~~l~~L~l~~n~ 48 (270)
T 2o6q_A 2 EALCKKD-----GGVCSCNNNKNSVDCSSKKLTAI--------------------------PSNIP--ADTKKLDLQSNK 48 (270)
T ss_dssp CCCBGGG-----TCSBEEETTTTEEECTTSCCSSC--------------------------CSCCC--TTCSEEECCSSC
T ss_pred CccCCCC-----CCCCEeCCCCCEEEccCCCCCcc--------------------------CCCCC--CCCCEEECcCCC
Confidence 4789987 455532 3456677777766321 11111 356666777777
Q ss_pred CcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc
Q 006570 136 LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL 214 (640)
Q Consensus 136 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~ 214 (640)
+++..+..|.++++|++|+|++|.++...+..|.++++|++|+|++|++++.++. |..+++|++|+|++|++++..+..
T Consensus 49 l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 128 (270)
T 2o6q_A 49 LSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRV 128 (270)
T ss_dssp CSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTT
T ss_pred CCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHH
Confidence 6655555666777777777777777644444456667777777777777666655 566666666666666654433321
Q ss_pred ---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCC
Q 006570 215 ---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLN 291 (640)
Q Consensus 215 ---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~ 291 (640)
+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+
T Consensus 129 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 208 (270)
T 2o6q_A 129 FDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLK 208 (270)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred hCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCC
Confidence 23333333333333333333344455555555555555544444444555555555555555443333444445555
Q ss_pred EEeccCccCc
Q 006570 292 FVEISHNLLI 301 (640)
Q Consensus 292 ~L~ls~N~l~ 301 (640)
.|++++|.+.
T Consensus 209 ~L~l~~N~~~ 218 (270)
T 2o6q_A 209 MLQLQENPWD 218 (270)
T ss_dssp EEECCSSCBC
T ss_pred EEEecCCCee
Confidence 5555555443
No 287
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=3.9e-27 Score=262.69 Aligned_cols=249 Identities=16% Similarity=0.056 Sum_probs=209.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|++|.+++.. +..+...+.|++|+|++|.+.+..|..|.++++|++|+|++|.++ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELR-MPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCC-GGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccC-hhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 47899999999986443 222445689999999999999988999999999999999999996 67766 899999999
Q ss_pred cccCcccc-cCCccccCCCCCCEEEccCccCCccCCCccCcCcC--CeeEccCCCC--CCCCCCcc--------------
Q 006570 155 ISSNFIYG-EIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLL--EELNLGGNDF--GPKFPSLS-------------- 215 (640)
Q Consensus 155 Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~~~-------------- 215 (640)
|++|++++ .+|..|+++++|++|+|++|++++. .+..+++| ++|+|++|++ ++..|..+
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 205 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL--DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHP 205 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT--TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECS
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC--chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecC
Confidence 99999996 4578999999999999999999863 45556666 9999999888 55444321
Q ss_pred ----------------------------------------------------------------------cccceeeccc
Q 006570 216 ----------------------------------------------------------------------KNIVSVILRN 225 (640)
Q Consensus 216 ----------------------------------------------------------------------~~L~~L~l~~ 225 (640)
.+|++|++++
T Consensus 206 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~ 285 (562)
T 3a79_B 206 NSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYN 285 (562)
T ss_dssp SSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEE
T ss_pred ccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEec
Confidence 1677788888
Q ss_pred CcccccCCccc-----------------------------------------------------cCCCCccEEEccCCcc
Q 006570 226 NSLRSEIPSGL-----------------------------------------------------KNFDQLKQFDISSNNF 252 (640)
Q Consensus 226 N~l~~~~p~~~-----------------------------------------------------~~l~~L~~L~Ls~N~l 252 (640)
|+++|.+|..+ ..+++|++|++++|++
T Consensus 286 n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l 365 (562)
T 3a79_B 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVF 365 (562)
T ss_dssp EEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCC
T ss_pred cEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCcc
Confidence 88888888765 6788999999999999
Q ss_pred cCcCCccccCCCCCcEEEccCCcCCc--cCCccccCCCCCCEEeccCccCcccCCC-CccCCCCCceeeeccccccCccC
Q 006570 253 VGPIQSFLFSLPSILYLNLAGNQLSE--ALPVNISCSAKLNFVEISHNLLIGKLPS-CIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 253 ~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~~~~L~~L~ls~N~l~~~~p~-~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
++.+|..+.++++|++|+|++|++++ .+|..+..+++|+.|++++|++++.+|. .+..+++|+.+++++|.+++..+
T Consensus 366 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 445 (562)
T 3a79_B 366 TDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF 445 (562)
T ss_dssp CTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGG
T ss_pred ccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchh
Confidence 99899999999999999999999987 3456789999999999999999985665 47888999999999999987654
No 288
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.95 E-value=4.5e-28 Score=253.79 Aligned_cols=177 Identities=15% Similarity=0.251 Sum_probs=145.2
Q ss_pred hcCCCCCCccccCCccceEEEEeC-CC-cEEEEEEeecccCCChHHHHHHHHHHhcCCCcc------cceeeeEEEeccc
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFLT-DG-SRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH------LVSILGHCILTYQ 521 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~g~~~~~~~ 521 (640)
.++|++.+.||+|+||+||+|+.. ++ +.||+|+++... ...+.+.+|++++++++|++ ++.+++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~---- 92 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN---- 92 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE----
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee----
Confidence 367888999999999999999853 44 689999997432 23467889999999998766 888888774
Q ss_pred CCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceee-------
Q 006570 522 DHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILL------- 594 (640)
Q Consensus 522 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl------- 594 (640)
.....++||||+ +|++.+++.. .....+++.+++.++.|++.||+|||+ .+|+||||||+|||+
T Consensus 93 ----~~~~~~lv~e~~-~~~l~~~l~~-~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~ 163 (355)
T 2eu9_A 93 ----FHGHMCIAFELL-GKNTFEFLKE-NNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFET 163 (355)
T ss_dssp ----ETTEEEEEEECC-CCBHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEE
T ss_pred ----eCCeEEEEEecc-CCChHHHHHh-ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccc
Confidence 345689999999 6688888765 233568999999999999999999998 699999999999999
Q ss_pred ------------cCCCceEEeCCCCCccccCCCCc--------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 595 ------------DKALTAKLSGYNIPLPSKVRNTL--------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 595 ------------~~~~~~kl~DfGla~~~~~~~~~--------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
+.++.+||+|||+++........ +.. +.++|||||||++|||+||.
T Consensus 164 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 236 (355)
T 2eu9_A 164 LYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 236 (355)
T ss_dssp EECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred cccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCC
Confidence 66789999999999765432211 334 88999999999999999984
No 289
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=3.7e-27 Score=242.00 Aligned_cols=237 Identities=21% Similarity=0.204 Sum_probs=207.4
Q ss_pred CCCCCCCcccEEeCC-----------CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCCh--hhhhhcCCCCC
Q 006570 60 CYLPSSSSLKIVCTN-----------SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDR--FFTILTKLSNL 126 (640)
Q Consensus 60 C~~~~~~~~gv~C~~-----------~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~--~~~~l~~l~~L 126 (640)
|.|. +|.|+. ..++.|+|++|.++ .++...+...+.|+.|+|++|.+... .+..+..+++|
T Consensus 7 C~~~-----~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L 80 (306)
T 2z66_A 7 CSGT-----EIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSL 80 (306)
T ss_dssp EETT-----EEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCC
T ss_pred eCCC-----EEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCccccccccccc
Confidence 6665 799964 26889999999885 33332234568999999999998743 36778889999
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCC-ccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIP-MEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGG 204 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~ 204 (640)
++|+|++|.++ .+|..+..+++|++|+|++|.+++..+ ..+.++++|++|++++|.+++.++. +..+++|++|+|++
T Consensus 81 ~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 159 (306)
T 2z66_A 81 KYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAG 159 (306)
T ss_dssp CEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCC
Confidence 99999999996 578889999999999999999996555 5799999999999999999998887 89999999999999
Q ss_pred CCCCC-CCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccC
Q 006570 205 NDFGP-KFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEAL 280 (640)
Q Consensus 205 N~l~~-~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 280 (640)
|++++ ..|.. +++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..+..+++|++|+|++|++++..
T Consensus 160 n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 239 (306)
T 2z66_A 160 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 239 (306)
T ss_dssp CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCS
T ss_pred CccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccC
Confidence 99986 44543 689999999999999988999999999999999999999888888999999999999999999999
Q ss_pred CccccCCC-CCCEEeccCccCccc
Q 006570 281 PVNISCSA-KLNFVEISHNLLIGK 303 (640)
Q Consensus 281 p~~~~~~~-~L~~L~ls~N~l~~~ 303 (640)
|..+..++ +|+.|++++|.+++.
T Consensus 240 ~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 240 KQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp SSSCCCCCTTCCEEECTTCCEECS
T ss_pred HHHHHhhhccCCEEEccCCCeecc
Confidence 99999884 999999999999865
No 290
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.95 E-value=3.1e-27 Score=266.06 Aligned_cols=246 Identities=16% Similarity=0.113 Sum_probs=193.0
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.++++++.+.. ++ .....+.|+.|++++|.+ +.+| .+ .+++|+.|++++|...+.+ .+..+++|++|+
T Consensus 285 ~~L~~L~l~~~~~~~-l~--~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 356 (606)
T 3vq2_A 285 ANVSAMSLAGVSIKY-LE--DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLD 356 (606)
T ss_dssp TTCSEEEEESCCCCC-CC--CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEE
T ss_pred CCCCEEEecCccchh-hh--hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEE
Confidence 467788888887733 22 222346788888888887 6677 45 8888888888888655544 567888888888
Q ss_pred cccCccccc--CCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCC-Cc---ccccceeecccCcc
Q 006570 155 ISSNFIYGE--IPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFP-SL---SKNIVSVILRNNSL 228 (640)
Q Consensus 155 Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~---~~~L~~L~l~~N~l 228 (640)
|++|.+++. +|..+..+++|++|+|++|.+++.++.+..+++|++|++++|++.+..| .. +++|+.|++++|++
T Consensus 357 ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l 436 (606)
T 3vq2_A 357 LSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNT 436 (606)
T ss_dssp CCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCC
T ss_pred CcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCC
Confidence 888888865 3777888888888888888888777668888888888888888877766 22 67888888888888
Q ss_pred cccCCccccCCCCccEEEccCCcccC-cCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCC
Q 006570 229 RSEIPSGLKNFDQLKQFDISSNNFVG-PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSC 307 (640)
Q Consensus 229 ~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~ 307 (640)
++..|..+.++++|++|+|++|++++ .+|..+..+++|++|+|++|++++..|..+..+++|+.|++++|++++.+|..
T Consensus 437 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 516 (606)
T 3vq2_A 437 KIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSH 516 (606)
T ss_dssp EECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGG
T ss_pred CccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHH
Confidence 88888888888888888888888887 46777888888888888888888877888888888888888888888877888
Q ss_pred ccCCCCCceeeeccccccCcc
Q 006570 308 IGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 308 ~~~~~~l~~l~l~~N~l~~~~ 328 (640)
+..+++|+.|++++|+++..+
T Consensus 517 ~~~l~~L~~L~l~~N~l~~~p 537 (606)
T 3vq2_A 517 YNQLYSLSTLDCSFNRIETSK 537 (606)
T ss_dssp TTTCTTCCEEECTTSCCCCEE
T ss_pred ccCCCcCCEEECCCCcCcccC
Confidence 888888888888888887544
No 291
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.95 E-value=4.8e-28 Score=260.98 Aligned_cols=172 Identities=18% Similarity=0.245 Sum_probs=135.1
Q ss_pred CCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCeEE
Q 006570 453 FDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++. .+...+
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~--------~~~~~~ 85 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSET--------TDRFLY 85 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEE--------CSSEEE
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEe--------cCCeEE
Confidence 3446789999999998776667999999998753 246778999999886 8999999998874 456789
Q ss_pred EEEEccCCCCHhHHhhccCCC----CCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCC----------
Q 006570 532 LVLEHISNGSLRDYLTDWKKK----DMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKA---------- 597 (640)
Q Consensus 532 lv~Ey~~~GsL~~~l~~~~~~----~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~---------- 597 (640)
+|||||+ |+|.+++...... ....+..++.++.|++.||+|||+ .+|+||||||+|||++.+
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccC
Confidence 9999996 6999999753211 112344567899999999999999 699999999999999754
Q ss_pred ---CceEEeCCCCCccccCCCC------------c---------c-------CC-CCccceehhhHHHHHHhh-c
Q 006570 598 ---LTAKLSGYNIPLPSKVRNT------------L---------S-------FH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 598 ---~~~kl~DfGla~~~~~~~~------------~---------~-------~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
+.+||+|||+++....... . + .. +.++|||||||++|||+| |
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g 236 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236 (434)
T ss_dssp CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCC
Confidence 5899999999986543210 0 1 23 889999999999999998 5
No 292
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.94 E-value=8.9e-27 Score=271.90 Aligned_cols=138 Identities=20% Similarity=0.132 Sum_probs=123.7
Q ss_pred CccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCC-CccccCCCCCCEEEcccCcccccCCccccCCCCCCEE
Q 006570 99 KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPL-PSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSI 177 (640)
Q Consensus 99 ~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 177 (640)
...++.|+|++|.+.+..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+.+..|..|.++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 368999999999999998999999999999999999777777 7889999999999999999999999999999999999
Q ss_pred EccCccCCccCCC---ccCcCcCCeeEccCCCCCCCCCC----cccccceeecccCcccccCCccc
Q 006570 178 VLADNLLNGSVPD---LQRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILRNNSLRSEIPSGL 236 (640)
Q Consensus 178 ~L~~N~l~~~~~~---~~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~~N~l~~~~p~~~ 236 (640)
+|++|.+++.+|. |.++++|++|+|++|++++..+. .+++|+.|+|++|.+++..|..+
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc
Confidence 9999999986543 89999999999999999887653 27899999999999877665544
No 293
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.94 E-value=8.1e-27 Score=266.26 Aligned_cols=230 Identities=18% Similarity=0.123 Sum_probs=209.0
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..+++|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 68999999999999988889999999999999999999999999999999999999999999555557999999999999
Q ss_pred cCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCcccc--CCCCccEEEccCCccc
Q 006570 180 ADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLK--NFDQLKQFDISSNNFV 253 (640)
Q Consensus 180 ~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~ 253 (640)
++|++++.+|. |.++++|++|+|++|++++..|.. +++|+.|++++|++++..|..+. .+++|+.|++++|+++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999998876 999999999999999999887764 68999999999999988777654 5689999999999999
Q ss_pred CcCCccccCC---------------------------CCCcEEEccCCcCCccCCccccCCCC--CCEEeccCccCcccC
Q 006570 254 GPIQSFLFSL---------------------------PSILYLNLAGNQLSEALPVNISCSAK--LNFVEISHNLLIGKL 304 (640)
Q Consensus 254 ~~~p~~~~~l---------------------------~~L~~L~l~~N~l~~~~p~~~~~~~~--L~~L~ls~N~l~~~~ 304 (640)
+..|..+..+ ++|+.|++++|++++..|..+..++. |+.|++++|++++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 9888877654 56788899999999988998988765 999999999999999
Q ss_pred CCCccCCCCCceeeeccccccCccC
Q 006570 305 PSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 305 p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
|..+..+++|+.+++++|.+++..+
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~ 289 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFS 289 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECT
T ss_pred cccccCcccccEeeCCCCccCccCh
Confidence 9999999999999999999988654
No 294
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=7.3e-27 Score=236.12 Aligned_cols=206 Identities=19% Similarity=0.119 Sum_probs=126.1
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
.++.|+|++|.+.+..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45666666666555555556666666666666666655555556666666666666666665555556666666666666
Q ss_pred CccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCcc
Q 006570 181 DNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSF 259 (640)
Q Consensus 181 ~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 259 (640)
+|.+++..+. +..+++|++|+|++|++++. .+|..|.++++|+.|+|++|++++..+..
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--------------------~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSF--------------------KLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--------------------CCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CCCccccCchhcccCCCCCEEECcCCcccee--------------------cCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 6666655553 55555555555555555431 24666666777777777777776666666
Q ss_pred ccCCCCCc----EEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 260 LFSLPSIL----YLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 260 ~~~l~~L~----~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+..+++|+ .|++++|++++..+..+. ..+|+.|++++|++++..+..+..+++|+.+++++|.+++.
T Consensus 169 ~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 169 LRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp GHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred hhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 66555555 677777777654444333 34677777777777765555566677777777777766654
No 295
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.94 E-value=5.8e-27 Score=263.80 Aligned_cols=245 Identities=16% Similarity=0.083 Sum_probs=184.6
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCC--CCccccCCCCCCE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGP--LPSKINRFWSLEV 152 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~--~p~~~~~l~~L~~ 152 (640)
..++.|+++++.+ +.++. +..+.|+.|++++|...+.+ .+..+++|++|+|++|.+++. +|..+..+++|++
T Consensus 307 ~~L~~L~l~~n~l-~~lp~---~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~ 380 (606)
T 3vq2_A 307 FKWQSLSIIRCQL-KQFPT---LDLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRH 380 (606)
T ss_dssp CCCSEEEEESCCC-SSCCC---CCCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCE
T ss_pred ccCCEEEcccccC-ccccc---CCCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccE
Confidence 3577778888777 44432 25677788888877544433 567788888888888887665 4777788888888
Q ss_pred EEcccCcccccCCccccCCCCCCEEEccCccCCccCC--CccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCc
Q 006570 153 LNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP--DLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNS 227 (640)
Q Consensus 153 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~ 227 (640)
|+|++|.+. .+|..+.++++|+.|++++|++++.+| .+..+++|++|++++|++++..|.. +++|+.|++++|+
T Consensus 381 L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 459 (606)
T 3vq2_A 381 LDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNS 459 (606)
T ss_dssp EECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCE
T ss_pred eECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCc
Confidence 888888877 466777888888888888888887776 3777888888888888887766654 5778888888888
Q ss_pred ccc-cCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCC
Q 006570 228 LRS-EIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPS 306 (640)
Q Consensus 228 l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~ 306 (640)
+++ .+|..|..+++|+.|+|++|++++.+|..|..+++|++|+|++|++++.+|..+..+++|+.|++++|+|+ .+|.
T Consensus 460 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~ 538 (606)
T 3vq2_A 460 FKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKG 538 (606)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEES
T ss_pred CCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCH
Confidence 876 46777888888888888888888777777888888888888888888777778888888888888888887 5666
Q ss_pred CccCCC-CCceeeeccccccCc
Q 006570 307 CIGSNS-LNRTVVSTWNCLSGV 327 (640)
Q Consensus 307 ~~~~~~-~l~~l~l~~N~l~~~ 327 (640)
.+..++ +|+.+++++|.+.+.
T Consensus 539 ~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 539 ILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp CGGGSCTTCCEEECCSCCCCCS
T ss_pred hHhhhcccCcEEEccCCCcccC
Confidence 677775 588888888877653
No 296
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.94 E-value=5.3e-28 Score=260.09 Aligned_cols=172 Identities=18% Similarity=0.246 Sum_probs=135.5
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCCCCCe
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPNTGST 529 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~~~~~ 529 (640)
.+|...+.||+|+||+||.....+++.||||++.... .+.+.+|+++++++ +||||+++++++. ....
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~--------~~~~ 92 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEK--------DRQF 92 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEE--------ETTE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEe--------cCCE
Confidence 4577789999999999665555578999999996432 23467899999999 7999999998875 3456
Q ss_pred EEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecC-----CCceEEeC
Q 006570 530 VFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDK-----ALTAKLSG 604 (640)
Q Consensus 530 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~-----~~~~kl~D 604 (640)
.|+|||||+ |+|.+++... .....+..++.++.|++.||+|||+ .+|+||||||+|||++. ...+||+|
T Consensus 93 ~~lv~E~~~-g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~D 166 (432)
T 3p23_A 93 QYIAIELCA-ATLQEYVEQK--DFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISD 166 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS--SCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECC
T ss_pred EEEEEECCC-CCHHHHHHhc--CCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEec
Confidence 899999996 5999999752 3345556678999999999999999 69999999999999953 34688999
Q ss_pred CCCCccccCCC-----------Cc------------cCC-CCccceehhhHHHHHHhh-c
Q 006570 605 YNIPLPSKVRN-----------TL------------SFH-TDRSSLYKIILIICVITL-C 639 (640)
Q Consensus 605 fGla~~~~~~~-----------~~------------~~~-~~~~DvwS~Gvvl~ellt-G 639 (640)
||+++...... +. ... +.++|||||||++|||+| |
T Consensus 167 FG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g 226 (432)
T 3p23_A 167 FGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEG 226 (432)
T ss_dssp TTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTS
T ss_pred ccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCC
Confidence 99997653221 00 122 668999999999999999 5
No 297
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.94 E-value=1.2e-27 Score=246.78 Aligned_cols=178 Identities=17% Similarity=0.244 Sum_probs=131.7
Q ss_pred hcCCCCCCccccCCccceEEEEe-CCCcEEEEEEeecccCC--ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCCC
Q 006570 450 TNNFDPTNLIGEGSQGQLYKGFL-TDGSRVSVKCLKLKQRH--LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNT 526 (640)
Q Consensus 450 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~~ 526 (640)
.++|+..+.||+|+||.||+|+. .+|+.||||++...... ..+.+.++..+++.++||||+++++++. .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~--------~ 95 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI--------T 95 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE--------C
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe--------c
Confidence 35678889999999999999996 46899999999754321 1233445556788889999999999986 3
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
....++||||+ ++.+..+... ....+++..+..++.|+++||+|||+. .+|+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg 170 (318)
T 2dyl_A 96 NTDVFIAMELM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFG 170 (318)
T ss_dssp SSEEEEEECCC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred CCcEEEEEecc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECC
Confidence 45689999999 4456555542 245689999999999999999999971 289999999999999999999999999
Q ss_pred CCccccCCCCc---------------------cCC-CCccceehhhHHHHHHhhcC
Q 006570 607 IPLPSKVRNTL---------------------SFH-TDRSSLYKIILIICVITLCC 640 (640)
Q Consensus 607 la~~~~~~~~~---------------------~~~-~~~~DvwS~Gvvl~elltG~ 640 (640)
++......... ... +.++|||||||++|||++|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~ 226 (318)
T 2dyl_A 171 ISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226 (318)
T ss_dssp TC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSS
T ss_pred CchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCC
Confidence 99754321110 112 77999999999999999984
No 298
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1e-26 Score=254.08 Aligned_cols=212 Identities=15% Similarity=0.138 Sum_probs=145.9
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
.|+.|+|++|.+.+..|..|..+++|++|+|++|.+++..| ++.+++|++|+|++|.|++..+ .++|++|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 66777777777776666777777777777777777766554 7777777777777777773322 2677777777
Q ss_pred CccCCccCCCccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCcccc-CCCCccEEEccCCcccCcC
Q 006570 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLK-NFDQLKQFDISSNNFVGPI 256 (640)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~ 256 (640)
+|.|++.++. .+++|++|+|++|++++..|.. +++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.|++..
T Consensus 108 ~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~ 185 (487)
T 3oja_A 108 NNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK 185 (487)
T ss_dssp SSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE
T ss_pred CCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccc
Confidence 7777776654 3466777777777777665543 56777777777777776666665 6777777777777777552
Q ss_pred CccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccccc
Q 006570 257 QSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325 (640)
Q Consensus 257 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~ 325 (640)
+ +..+++|+.|+|++|+|++. |..+..+++|+.|++++|.|++ +|..+..+++|+.+++++|.+.
T Consensus 186 ~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 186 G--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp C--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred c--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 2 33467777777777777763 3346677777777777777774 5666777777777777777665
No 299
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.94 E-value=6.2e-26 Score=253.34 Aligned_cols=111 Identities=16% Similarity=0.190 Sum_probs=80.4
Q ss_pred cceeecccCcccccCCccccCCCCccEEEccCCcccCcCC-ccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEecc
Q 006570 218 IVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ-SFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS 296 (640)
Q Consensus 218 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls 296 (640)
|+.|++++|.+++. |..+..+++|+.|++++|++.+..| ..+..+++|++|++++|++++..|..+..+++|+.|+++
T Consensus 375 L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 453 (570)
T 2z63_A 375 LKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMA 453 (570)
T ss_dssp CCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECT
T ss_pred cCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECc
Confidence 33344444444432 2236667777777777888777655 467788888888888888888778888888888888888
Q ss_pred CccCc-ccCCCCccCCCCCceeeeccccccCccC
Q 006570 297 HNLLI-GKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 297 ~N~l~-~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
+|+++ +.+|..+..+++|+.|++++|.+++..+
T Consensus 454 ~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~ 487 (570)
T 2z63_A 454 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 487 (570)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT
T ss_pred CCcCccccchhhhhcccCCCEEECCCCccccCCh
Confidence 88887 5678888888888888888888877644
No 300
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=2.2e-27 Score=244.51 Aligned_cols=221 Identities=18% Similarity=0.152 Sum_probs=191.3
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcC-cCCCCcccc-------CCCCCCEEEcccCcccccCCccc--c
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGL-WGPLPSKIN-------RFWSLEVLNISSNFIYGEIPMEI--T 169 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~--~ 169 (640)
..++.+++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+ .
T Consensus 43 ~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 118 (312)
T 1wwl_A 43 RSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEA 118 (312)
T ss_dssp EECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSC
T ss_pred CCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHh
Confidence 5788999999998 667766554 99999999999 567887776 89999999999999999999987 8
Q ss_pred CCCCCCEEEccCccCCccCCCccCc-----CcCCeeEccCCCCCCCCCCc---ccccceeecccCccccc--CCccc--c
Q 006570 170 SLKNLKSIVLADNLLNGSVPDLQRL-----VLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSE--IPSGL--K 237 (640)
Q Consensus 170 ~l~~L~~L~L~~N~l~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~--~p~~~--~ 237 (640)
.+++|++|+|++|++++.++.+..+ ++|++|+|++|++++..|.. +++|+.|+|++|++.+. +|..+ .
T Consensus 119 ~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp CSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred cCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 9999999999999999994447777 99999999999999888654 78999999999999876 34445 8
Q ss_pred CCCCccEEEccCCcccCc--CC-ccccCCCCCcEEEccCCcCCccCC-ccccCCCCCCEEeccCccCcccCCCCccCCCC
Q 006570 238 NFDQLKQFDISSNNFVGP--IQ-SFLFSLPSILYLNLAGNQLSEALP-VNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313 (640)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~--~p-~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 313 (640)
++++|++|+|++|+|++. ++ ..+..+++|++|+|++|++++.+| ..+..+++|+.|++++|+|+ .+|..+. ++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~ 275 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AK 275 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CC
Confidence 999999999999999842 22 445688999999999999999775 45677899999999999999 7888877 89
Q ss_pred CceeeeccccccCc
Q 006570 314 NRTVVSTWNCLSGV 327 (640)
Q Consensus 314 l~~l~l~~N~l~~~ 327 (640)
|+.|++++|++++.
T Consensus 276 L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 276 LSVLDLSYNRLDRN 289 (312)
T ss_dssp EEEEECCSSCCCSC
T ss_pred ceEEECCCCCCCCC
Confidence 99999999999986
No 301
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.94 E-value=1.8e-26 Score=256.60 Aligned_cols=179 Identities=21% Similarity=0.149 Sum_probs=150.2
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..++.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 68999999999999888999999999999999999999988899999999999999999999777777999999999999
Q ss_pred cCccCCcc--CCCccCcCcCCeeEccCCCCCCCCCC-c---ccccceeecccCcccccCCccccCCCCccEEEccCCccc
Q 006570 180 ADNLLNGS--VPDLQRLVLLEELNLGGNDFGPKFPS-L---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV 253 (640)
Q Consensus 180 ~~N~l~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~-~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 253 (640)
++|.+++. ++.+.++++|++|++++|++.+.+|. . +++|++|++++|++++.+|..++++++|+.|++++|.+.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 99999964 34599999999999999996555542 2 789999999999999999999988777777777766665
Q ss_pred CcCCccccCCCCCcEEEccCCcCCc
Q 006570 254 GPIQSFLFSLPSILYLNLAGNQLSE 278 (640)
Q Consensus 254 ~~~p~~~~~l~~L~~L~l~~N~l~~ 278 (640)
...+..+..+++|++|++++|++++
T Consensus 186 ~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 186 FLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp THHHHHHHSTTTBSEEEEESCBCTT
T ss_pred ccchhhHhhcccccEEEccCCcccc
Confidence 3222223456666666666666655
No 302
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.93 E-value=3.9e-26 Score=254.99 Aligned_cols=247 Identities=16% Similarity=0.126 Sum_probs=207.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
..++.|+++++.++. ++.. .... .++.|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|+
T Consensus 282 ~~L~~L~l~~~~l~~-l~~~-~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~ 353 (570)
T 2z63_A 282 TNVSSFSLVSVTIER-VKDF-SYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLD 353 (570)
T ss_dssp TTCSEEEEESCEECS-CCBC-CSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEE
T ss_pred CcccEEEecCccchh-hhhh-hccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEe
Confidence 356677777776642 2211 1223 7788888888775 4443 5778888888888888776664 7889999999
Q ss_pred cccCcccccC--CccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCC----cccccceeecccCcc
Q 006570 155 ISSNFIYGEI--PMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILRNNSL 228 (640)
Q Consensus 155 Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~~N~l 228 (640)
|++|.+++.. |..+.++++|++|++++|.+++.++.+..+++|++|++++|++++..|. .+++|+.|++++|.+
T Consensus 354 l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l 433 (570)
T 2z63_A 354 LSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 433 (570)
T ss_dssp CCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCC
T ss_pred CcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcc
Confidence 9999998654 7788899999999999999998888899999999999999999877652 268999999999999
Q ss_pred cccCCccccCCCCccEEEccCCccc-CcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCC
Q 006570 229 RSEIPSGLKNFDQLKQFDISSNNFV-GPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSC 307 (640)
Q Consensus 229 ~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~ 307 (640)
++..|..|.++++|+.|+|++|+++ +.+|..+..+++|++|+|++|++++..|..+..+++|+.|++++|++++.+|..
T Consensus 434 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 513 (570)
T 2z63_A 434 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGI 513 (570)
T ss_dssp EECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred cccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHH
Confidence 9999999999999999999999997 678899999999999999999999988999999999999999999999988888
Q ss_pred ccCCCCCceeeeccccccCccC
Q 006570 308 IGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 308 ~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
+..+++|+.+++++|.+++..+
T Consensus 514 ~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 514 FDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp TTTCTTCCEEECCSSCBCCCTT
T ss_pred hhcccCCcEEEecCCcccCCCc
Confidence 9999999999999999988654
No 303
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=4.7e-25 Score=222.13 Aligned_cols=200 Identities=20% Similarity=0.164 Sum_probs=181.8
Q ss_pred CCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEcc
Q 006570 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLG 203 (640)
Q Consensus 125 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~ 203 (640)
+++.+++++|+++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.++..++. |.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 5788999999996 5787665 6899999999999977777899999999999999999988887 7899999999999
Q ss_pred CCCCCCCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccC
Q 006570 204 GNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEAL 280 (640)
Q Consensus 204 ~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 280 (640)
+|++++..+.. +++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 99999877654 689999999999999888888999999999999999999887778999999999999999999977
Q ss_pred CccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 281 PVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 281 p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+..|..+++|+.|++++|++++..+..+..+++|+.+++++|.+...
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 77899999999999999999987777899999999999999987653
No 304
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=2.7e-25 Score=226.11 Aligned_cols=203 Identities=18% Similarity=0.161 Sum_probs=177.9
Q ss_pred hhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCC
Q 006570 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLE 198 (640)
Q Consensus 119 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~ 198 (640)
.+.++++|+.+++++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.|++.++. ..+++|+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~ 80 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLG 80 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCC
Confidence 3678889999999999995 5776664 6899999999999988888899999999999999999987664 7889999
Q ss_pred eeEccCCCCCCCCCC--cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcC
Q 006570 199 ELNLGGNDFGPKFPS--LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276 (640)
Q Consensus 199 ~L~L~~N~l~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 276 (640)
+|+|++|+++..... .+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 81 ~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 81 TLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 999999999754332 268999999999999987788899999999999999999988888889999999999999999
Q ss_pred CccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 277 SEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 277 ~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
++..+..|..+++|+.|+|++|+|+ .+|..+.....++.+++++|.+..
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 9877777888999999999999998 688888888899999999998753
No 305
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.93 E-value=2.5e-25 Score=251.29 Aligned_cols=254 Identities=18% Similarity=0.187 Sum_probs=206.8
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|++|.+++ +++..+...++|++|+|++|.+.+..+..|.+|++|++|+|++|++++..+..|+++++|++|+
T Consensus 76 ~~L~~L~Ls~N~i~~-i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 76 PELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp TTCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCC-cChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 478899999998854 3333345568999999999999888888999999999999999999887777899999999999
Q ss_pred cccCcccc-cCCccccCCCCCCEEEccCccCCccCCC-cc----------------------------------------
Q 006570 155 ISSNFIYG-EIPMEITSLKNLKSIVLADNLLNGSVPD-LQ---------------------------------------- 192 (640)
Q Consensus 155 Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~---------------------------------------- 192 (640)
|++|.+++ .+|..++++++|++|+|++|+|++..+. +.
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcc
Confidence 99999985 4688899999999999999987654321 00
Q ss_pred --------------------------------------------------------------------------------
Q 006570 193 -------------------------------------------------------------------------------- 192 (640)
Q Consensus 193 -------------------------------------------------------------------------------- 192 (640)
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence
Q ss_pred ------------------------------------------------------CcCcCCeeEccCCCCCCC--C-----
Q 006570 193 ------------------------------------------------------RLVLLEELNLGGNDFGPK--F----- 211 (640)
Q Consensus 193 ------------------------------------------------------~l~~L~~L~L~~N~l~~~--~----- 211 (640)
.+++|+.|++++|.+... .
T Consensus 315 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 394 (635)
T 4g8a_A 315 SVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 394 (635)
T ss_dssp SCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHH
T ss_pred ccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchh
Confidence 123344444444443100 0
Q ss_pred ------------------------------------------C----CcccccceeecccCcccccCCccccCCCCccEE
Q 006570 212 ------------------------------------------P----SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQF 245 (640)
Q Consensus 212 ------------------------------------------~----~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 245 (640)
+ ..+.+++.++++.|.+++..|..+..+++|+.|
T Consensus 395 ~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L 474 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 474 (635)
T ss_dssp SCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred hhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence 0 002455667788888988889999999999999
Q ss_pred EccCCcc-cCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccc
Q 006570 246 DISSNNF-VGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCL 324 (640)
Q Consensus 246 ~Ls~N~l-~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l 324 (640)
+|++|++ .+.+|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|++++|++
T Consensus 475 ~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 554 (635)
T 4g8a_A 475 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 554 (635)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCC
T ss_pred hhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcC
Confidence 9999985 456788899999999999999999999999999999999999999999998899999999999999999999
Q ss_pred cCccC
Q 006570 325 SGVNT 329 (640)
Q Consensus 325 ~~~~~ 329 (640)
++.++
T Consensus 555 ~~~~~ 559 (635)
T 4g8a_A 555 MTSKK 559 (635)
T ss_dssp CBCCS
T ss_pred CCCCH
Confidence 98766
No 306
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.2e-26 Score=239.40 Aligned_cols=213 Identities=15% Similarity=0.154 Sum_probs=153.4
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
+.++.|+|++|.+.+..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|.+++. | .+++|++|++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l-~----~~~~L~~L~l 106 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPSIETLHA 106 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE-E----ECTTCCEEEC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc-c----CCCCcCEEEC
Confidence 467777888877777777777788888888888887766544 77777888888888877732 2 2377788888
Q ss_pred cCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCcccc-CCCCccEEEccCCcccCc
Q 006570 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLK-NFDQLKQFDISSNNFVGP 255 (640)
Q Consensus 180 ~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~ 255 (640)
++|++++.++. .+++|++|+|++|++++..+.. +++|+.|+|++|++++..|..+. .+++|++|+|++|++++.
T Consensus 107 ~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 184 (317)
T 3o53_A 107 ANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (317)
T ss_dssp CSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc
Confidence 88877776654 2567778888888877665543 56777788888888776666663 677788888888887754
Q ss_pred CCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccccc
Q 006570 256 IQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLS 325 (640)
Q Consensus 256 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~ 325 (640)
|. ...+++|++|+|++|++++ +|..+..+++|+.|++++|+++ .+|..+..+++|+.+++++|.++
T Consensus 185 -~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 185 -KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFH 250 (317)
T ss_dssp -EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCB
T ss_pred -cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCcc
Confidence 22 3347778888888888776 4444777777888888888777 45667777777888888877776
No 307
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=3.3e-26 Score=236.16 Aligned_cols=219 Identities=20% Similarity=0.124 Sum_probs=165.5
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
.++.++++.+.+.......+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 34445566666555555666777788888888888877767778888888888888888876554 7788888888888
Q ss_pred CccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccc
Q 006570 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFL 260 (640)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 260 (640)
+|++++.++ .++|++|++++|++++..+..+++|+.|++++|++++..|..+..+++|+.|+|++|++++..|..+
T Consensus 89 ~n~l~~l~~----~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 164 (317)
T 3o53_A 89 NNYVQELLV----GPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAEL 164 (317)
T ss_dssp SSEEEEEEE----CTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGG
T ss_pred CCccccccC----CCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHH
Confidence 888876553 3788888888888887777777888888888888887777778888888888888888887766666
Q ss_pred c-CCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 261 F-SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 261 ~-~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
. .+++|++|+|++|++++. |. ...+++|+.|++++|++++. |..+..+++|+.|++++|.+++.+
T Consensus 165 ~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~l~ 230 (317)
T 3o53_A 165 AASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVLIE 230 (317)
T ss_dssp GGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCEEC
T ss_pred hhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccchh
Confidence 3 678888888888888764 32 33478888888888888854 444777888888888888887643
No 308
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=1.4e-26 Score=242.75 Aligned_cols=228 Identities=17% Similarity=0.133 Sum_probs=189.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|++++|.+++. ++..+...+.|+.|+|++|.+.+..|..|.++++|++|+|++|.+++..+..|.++++|++|+
T Consensus 52 ~~L~~L~l~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 52 EAVKSLDLSNNRITYI-SNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp TTCCEEECTTSCCCEE-CTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE
T ss_pred ccCcEEECCCCcCccc-CHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE
Confidence 4789999999988543 222344568999999999999888888999999999999999999765445589999999999
Q ss_pred cccCcccccCCc--cccCCCCCCEEEccCc-cCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCc
Q 006570 155 ISSNFIYGEIPM--EITSLKNLKSIVLADN-LLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNS 227 (640)
Q Consensus 155 Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N-~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~ 227 (640)
|++|.++ .+|. .+.++++|++|++++| .+++.++. |.++++|++|++++|++++..|.. +++|++|++++|+
T Consensus 131 L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 131 LLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp CTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSC
T ss_pred CCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCc
Confidence 9999999 5555 7899999999999999 47777665 899999999999999998877765 5788999999999
Q ss_pred ccccCCccccCCCCccEEEccCCcccCc-------------------------------CCccccCCCCCcEEEccCCcC
Q 006570 228 LRSEIPSGLKNFDQLKQFDISSNNFVGP-------------------------------IQSFLFSLPSILYLNLAGNQL 276 (640)
Q Consensus 228 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-------------------------------~p~~~~~l~~L~~L~l~~N~l 276 (640)
++...+..+..+++|+.|+|++|++++. +|..+..+++|++|+|++|++
T Consensus 210 l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l 289 (353)
T 2z80_A 210 HILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQL 289 (353)
T ss_dssp STTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCC
T ss_pred cccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCC
Confidence 9744434455688999999999999874 345577899999999999999
Q ss_pred CccCCcc-ccCCCCCCEEeccCccCcccCC
Q 006570 277 SEALPVN-ISCSAKLNFVEISHNLLIGKLP 305 (640)
Q Consensus 277 ~~~~p~~-~~~~~~L~~L~ls~N~l~~~~p 305 (640)
+. +|.. |..+++|+.|++++|++++..|
T Consensus 290 ~~-i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 290 KS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred Cc-cCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 86 5555 6899999999999999987654
No 309
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.9e-26 Score=251.90 Aligned_cols=200 Identities=22% Similarity=0.157 Sum_probs=181.5
Q ss_pred cCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCee
Q 006570 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEEL 200 (640)
Q Consensus 121 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L 200 (640)
..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.|++.++. ++|++|
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L 104 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETL 104 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEE
Confidence 344589999999999998888899999999999999999997766 99999999999999999987654 899999
Q ss_pred EccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCcccc-CCCCCcEEEccCCcCCcc
Q 006570 201 NLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF-SLPSILYLNLAGNQLSEA 279 (640)
Q Consensus 201 ~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~ 279 (640)
+|++|.+++..+..+++|+.|+|++|.+++..|..|+.+++|+.|+|++|+|++.+|..+. .+++|+.|+|++|.|++.
T Consensus 105 ~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 105 HAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp ECCSSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred ECcCCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 9999999998888899999999999999999999999999999999999999998888886 799999999999999886
Q ss_pred CCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 280 LPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 280 ~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
|. +..+++|+.|+|++|.|++.+| .+..+++|+.|++++|.+++.++
T Consensus 185 -~~-~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~ 231 (487)
T 3oja_A 185 -KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEK 231 (487)
T ss_dssp -EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECT
T ss_pred -cc-cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccch
Confidence 33 4468999999999999997555 58899999999999999998543
No 310
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.93 E-value=7.7e-25 Score=237.12 Aligned_cols=230 Identities=17% Similarity=0.099 Sum_probs=181.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+++++.+++. + .....+.|++|+|++|.+.+. | ++.+++|++|+|++|.+++. | ++++++|++|+
T Consensus 42 ~~L~~L~Ls~n~l~~~-~--~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T--GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp TTCCEEECCSSCCCCC-T--TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred CCCCEEEccCCCcccC-h--hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 5788899999988653 2 233457899999999988774 3 88999999999999999764 4 88999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCC-CcccccceeecccCcccccCC
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFP-SLSKNIVSVILRNNSLRSEIP 233 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~L~~L~l~~N~l~~~~p 233 (640)
|++|.+++ +| ++.+++|++|++++|++++. .+.++++|++|++++|+..+.++ ..+++|+.|++++|++++ +|
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l--~l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l~ 186 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI--DVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-LD 186 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC--CCTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-CC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCcccee--ccccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-ec
Confidence 99999986 55 88999999999999999985 38888999999999996555543 337889999999999986 45
Q ss_pred ccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCC-
Q 006570 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNS- 312 (640)
Q Consensus 234 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~- 312 (640)
+..+++|+.|++++|++++. .++.+++|++|++++|++++ +| +..+++|+.|++++|++++..+..+..+.
T Consensus 187 --l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~ 258 (457)
T 3bz5_A 187 --VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTT 258 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCE
T ss_pred --cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCE
Confidence 78888999999999999875 37888999999999999988 56 78889999999999999886554444433
Q ss_pred ------CCceeeeccccccCc
Q 006570 313 ------LNRTVVSTWNCLSGV 327 (640)
Q Consensus 313 ------~l~~l~l~~N~l~~~ 327 (640)
+++.+++++|.+.|.
T Consensus 259 L~l~~n~L~~L~l~~n~~~~~ 279 (457)
T 3bz5_A 259 LHCIQTDLLEIDLTHNTQLIY 279 (457)
T ss_dssp EECTTCCCSCCCCTTCTTCCE
T ss_pred EeccCCCCCEEECCCCccCCc
Confidence 334444454444443
No 311
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.5e-25 Score=225.94 Aligned_cols=214 Identities=20% Similarity=0.184 Sum_probs=166.0
Q ss_pred cccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCc
Q 006570 103 SQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN 182 (640)
Q Consensus 103 ~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 182 (640)
..+++..+.+.+. ..+..+++|+.|++++|.++ .++ .+..+++|++|+|++|.+++ + +.+.++++|++|+|++|
T Consensus 22 ~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n 95 (272)
T 3rfs_A 22 IKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGN 95 (272)
T ss_dssp HHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTS
T ss_pred HHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCC
Confidence 3344555444333 23556778888888888874 333 47788888888888888875 3 36788888888888888
Q ss_pred cCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCc
Q 006570 183 LLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS 258 (640)
Q Consensus 183 ~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 258 (640)
.+++.++. |.++++|++|+|++|++++..+.. +++|+.|++++|++++..|..|.++++|+.|+|++|++++..+.
T Consensus 96 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 175 (272)
T 3rfs_A 96 QLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEG 175 (272)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred ccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHH
Confidence 88887776 688888888888888888776653 57888888888888877777788888889999999988887777
Q ss_pred cccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 259 FLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 259 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
.+..+++|++|+|++|++++..|..+..+++|+.|++++|.+.+..| .++.+++..|.++|..|
T Consensus 176 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-------~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 176 VFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-------GIRYLSEWINKHSGVVR 239 (272)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-------TTHHHHHHHHHTGGGBB
T ss_pred HhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-------HHHHHHHHHHhCCCccc
Confidence 78888888999999998888777778888888999998888876544 57888888888888766
No 312
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.5e-25 Score=226.08 Aligned_cols=204 Identities=21% Similarity=0.189 Sum_probs=178.9
Q ss_pred CccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 006570 99 KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 99 ~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 178 (640)
...++.|++++|.+... ..+..+++|++|+|++|.+++ + +.+..+++|++|+|++|.+++..|..|.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 36788899999887542 358899999999999999976 3 4799999999999999999977777789999999999
Q ss_pred ccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccC
Q 006570 179 LADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVG 254 (640)
Q Consensus 179 L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 254 (640)
|++|++++.++. |..+++|++|+|++|++++..+.. +++|+.|++++|++++..|..|..+++|+.|+|++|++++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 999999998887 889999999999999999877754 6899999999999998878788999999999999999999
Q ss_pred cCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCC
Q 006570 255 PIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313 (640)
Q Consensus 255 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 313 (640)
..|..+..+++|++|+|++|.+.+. +++|+.|+++.|.++|.+|..++.+..
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 196 VPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred cCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 8888889999999999999998763 557889999999999999998876643
No 313
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.93 E-value=3.4e-25 Score=231.53 Aligned_cols=240 Identities=21% Similarity=0.217 Sum_probs=206.4
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|++++|.++.. + .+...+.|++|+|++|.+.+..+ +..+++|+.|++++|.....++ .+..+++|++|+
T Consensus 88 ~~L~~L~L~~n~i~~~-~--~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~ 161 (347)
T 4fmz_A 88 VKLTNLYIGTNKITDI-S--ALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLT 161 (347)
T ss_dssp TTCCEEECCSSCCCCC-G--GGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEE
T ss_pred CcCCEEEccCCcccCc-h--HHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEE
Confidence 5789999999988542 1 23445899999999999876544 9999999999999997766555 499999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCC-cccccceeecccCcccccCC
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS-LSKNIVSVILRNNSLRSEIP 233 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~L~~L~l~~N~l~~~~p 233 (640)
+++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+- .+++|+.|++++|++++..+
T Consensus 162 l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~ 238 (347)
T 4fmz_A 162 VTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDLSP 238 (347)
T ss_dssp CCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGG
T ss_pred ecCCCcCCchh--hccCCCCCEEEccCCccccccc-ccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccCCCcc
Confidence 99999985444 8899999999999999998766 88999999999999999876652 37899999999999986544
Q ss_pred ccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCC
Q 006570 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313 (640)
Q Consensus 234 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 313 (640)
+..+++|++|++++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..+..+++
T Consensus 239 --~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 312 (347)
T 4fmz_A 239 --LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTN 312 (347)
T ss_dssp --GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTT
T ss_pred --hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhcccc
Confidence 88999999999999999864 4688999999999999999874 35888999999999999999989999999999
Q ss_pred CceeeeccccccCccC
Q 006570 314 NRTVVSTWNCLSGVNT 329 (640)
Q Consensus 314 l~~l~l~~N~l~~~~~ 329 (640)
|+.+++++|++++..+
T Consensus 313 L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 313 LTTLFLSQNHITDIRP 328 (347)
T ss_dssp CSEEECCSSSCCCCGG
T ss_pred CCEEEccCCccccccC
Confidence 9999999999998765
No 314
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.93 E-value=6.4e-25 Score=229.41 Aligned_cols=238 Identities=17% Similarity=0.244 Sum_probs=204.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|++++|.++...+ +...+.|++|+|++|.+.+. +.+.++++|++|+|++|.+++ +|. +..+++|++|+
T Consensus 66 ~~L~~L~l~~n~i~~~~~---~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~ 138 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDISP---LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSLN 138 (347)
T ss_dssp TTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred CCccEEEccCCccccchh---hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccC-chh-hccCCceeEEE
Confidence 579999999998854321 44568999999999988763 469999999999999999965 454 99999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCC-CcccccceeecccCcccccCC
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFP-SLSKNIVSVILRNNSLRSEIP 233 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~L~~L~l~~N~l~~~~p 233 (640)
+++|.....++ .+..+++|++|++++|.+++..+ +..+++|++|++++|++.+..+ ..+++|+.|++++|.+++..+
T Consensus 139 l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~ 216 (347)
T 4fmz_A 139 LGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP 216 (347)
T ss_dssp CTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGG
T ss_pred CCCCCCccccc-chhhCCCCcEEEecCCCcCCchh-hccCCCCCEEEccCCcccccccccCCCccceeecccCCCCCCch
Confidence 99997764544 49999999999999999998766 8899999999999999987654 237899999999999986544
Q ss_pred ccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCC
Q 006570 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313 (640)
Q Consensus 234 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 313 (640)
+..+++|+.|++++|++++..+ +..+++|++|++++|++++. ..+..+++|+.|++++|++++. ..+..+++
T Consensus 217 --~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~ 288 (347)
T 4fmz_A 217 --VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQ 288 (347)
T ss_dssp --GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTT
T ss_pred --hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCC
Confidence 8899999999999999996544 89999999999999999873 4688999999999999999864 45888999
Q ss_pred CceeeeccccccCccC
Q 006570 314 NRTVVSTWNCLSGVNT 329 (640)
Q Consensus 314 l~~l~l~~N~l~~~~~ 329 (640)
|+.+++++|.+++..+
T Consensus 289 L~~L~L~~n~l~~~~~ 304 (347)
T 4fmz_A 289 LNSLFLNNNQLGNEDM 304 (347)
T ss_dssp CSEEECCSSCCCGGGH
T ss_pred CCEEECcCCcCCCcCh
Confidence 9999999999987654
No 315
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.93 E-value=2.5e-25 Score=228.85 Aligned_cols=220 Identities=18% Similarity=0.129 Sum_probs=182.2
Q ss_pred cccccccCccCCCChh-hh--hhcCCCCCcEeecccCcCcCCCCccc--cCCCCCCEEEcccCcccccCC----ccccCC
Q 006570 101 SASQQSLSANFNIDRF-FT--ILTKLSNLKVLSLVSLGLWGPLPSKI--NRFWSLEVLNISSNFIYGEIP----MEITSL 171 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~-~~--~l~~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l 171 (640)
.++.+.+.++.+.... .. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 4556666666554321 11 22345779999999999999999988 999999999999999998666 345679
Q ss_pred CCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCC-------CCCcccccceeecccCcccccCCc----cccCC
Q 006570 172 KNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPK-------FPSLSKNIVSVILRNNSLRSEIPS----GLKNF 239 (640)
Q Consensus 172 ~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~-------~~~~~~~L~~L~l~~N~l~~~~p~----~~~~l 239 (640)
++|++|+|++|++++.++. |..+++|++|+|++|++.+. ....+++|++|+|++|+++. +|. .+.++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 9999999999999999876 89999999999999998642 22347899999999999973 333 25788
Q ss_pred CCccEEEccCCcccCcCCccccCC---CCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCce
Q 006570 240 DQLKQFDISSNNFVGPIQSFLFSL---PSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRT 316 (640)
Q Consensus 240 ~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~ 316 (640)
++|++|||++|+|++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 999999999999999888888777 69999999999998 5787775 8999999999999964 44 677899999
Q ss_pred eeeccccccC
Q 006570 317 VVSTWNCLSG 326 (640)
Q Consensus 317 l~l~~N~l~~ 326 (640)
|++++|+++.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999875
No 316
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.93 E-value=1.2e-24 Score=235.76 Aligned_cols=233 Identities=18% Similarity=0.101 Sum_probs=195.1
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|++|.+++. +....+.|++|+|++|.+.+. + ++++++|++|+|++|.+++ +| ++.+++|++|+
T Consensus 64 ~~L~~L~Ls~n~l~~~----~~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~ 133 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL----DLSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLN 133 (457)
T ss_dssp TTCSEEECCSSCCSCC----CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCeE----ccccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEE
Confidence 5789999999998663 244568999999999998875 3 8999999999999999977 55 89999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCc
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS 234 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~ 234 (640)
|++|.+++ +| ++++++|++|++++|...+.+ .+..+++|++|++++|++++.....+++|+.|++++|++++.
T Consensus 134 l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~ls~n~l~~l~l~~l~~L~~L~l~~N~l~~~--- 206 (457)
T 3bz5_A 134 CARNTLTE-ID--VSHNTQLTELDCHLNKKITKL-DVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITKL--- 206 (457)
T ss_dssp CTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC-CCTTCTTCCEEECCSSCCCCCCCTTCTTCCEEECCSSCCSCC---
T ss_pred CCCCccce-ec--cccCCcCCEEECCCCCccccc-ccccCCcCCEEECCCCccceeccccCCCCCEEECcCCcCCee---
Confidence 99999996 44 889999999999999766655 588899999999999999986545578999999999999875
Q ss_pred cccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCC-------CCCEEeccCccCcccCCCC
Q 006570 235 GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSA-------KLNFVEISHNLLIGKLPSC 307 (640)
Q Consensus 235 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~-------~L~~L~ls~N~l~~~~p~~ 307 (640)
.++.+++|+.|++++|++++ +| +..+++|++|++++|++++..+..+..+. +|+.|++++|.+.+.+|
T Consensus 207 ~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~-- 281 (457)
T 3bz5_A 207 DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ-- 281 (457)
T ss_dssp CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--
T ss_pred ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--
Confidence 48899999999999999997 56 88899999999999999987666665554 56677777777777776
Q ss_pred ccCCCCCceeeeccccccCccC
Q 006570 308 IGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 308 ~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
++.+++|+.+++++|...+..|
T Consensus 282 ~~~l~~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 282 AEGCRKIKELDVTHNTQLYLLD 303 (457)
T ss_dssp CTTCTTCCCCCCTTCTTCCEEE
T ss_pred ccccccCCEEECCCCcccceec
Confidence 4567888888888888776654
No 317
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.92 E-value=1.2e-24 Score=236.99 Aligned_cols=237 Identities=22% Similarity=0.252 Sum_probs=139.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|+|++|.+++..+ ......|++|+|++|.+.+..+ +.++++|++|+|++|.+++. |. +.++++|++|+
T Consensus 68 ~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~ 140 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLE 140 (466)
T ss_dssp TTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred cCCCEEECCCCccCCchh---hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEE
Confidence 467778888887754321 3345778888888887766554 77888888888888887554 33 77788888888
Q ss_pred cccCcccccCCc--------------------cccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCC-
Q 006570 155 ISSNFIYGEIPM--------------------EITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS- 213 (640)
Q Consensus 155 Ls~N~l~~~~p~--------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~- 213 (640)
|++|.+.+ +|. .+.++++|+.|++++|.+++. +.+..+++|++|++++|++++..|.
T Consensus 141 l~~n~l~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~ 218 (466)
T 1o6v_A 141 LSSNTISD-ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI-SVLAKLTNLESLIATNNQISDITPLG 218 (466)
T ss_dssp EEEEEECC-CGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGGGG
T ss_pred CCCCccCC-ChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC-hhhccCCCCCEEEecCCccccccccc
Confidence 88887774 332 134445555555555555443 2355555555555555555544432
Q ss_pred cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEE
Q 006570 214 LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFV 293 (640)
Q Consensus 214 ~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L 293 (640)
.+++|+.|++++|++++. +.+..+++|+.|++++|++++..| +..+++|++|++++|++++..| +..+++|+.|
T Consensus 219 ~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 292 (466)
T 1o6v_A 219 ILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNL 292 (466)
T ss_dssp GCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEE
T ss_pred ccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeE
Confidence 145555555555555532 245555556666666665554433 5555566666666666554332 5555566666
Q ss_pred eccCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 294 EISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 294 ~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
++++|++++..| +..+++|+.|++++|++++..
T Consensus 293 ~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 325 (466)
T 1o6v_A 293 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDIS 325 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCG
T ss_pred EcCCCcccCchh--hcCCCCCCEEECcCCcCCCch
Confidence 666666554333 455556666666666555543
No 318
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.92 E-value=1.8e-26 Score=246.98 Aligned_cols=186 Identities=15% Similarity=0.141 Sum_probs=135.2
Q ss_pred cCCCCCCccccCCccceEEEE-eCCCcEEEEEEeecccC---CChHHHHHHHHHHhcCCC-ccccee---------eeEE
Q 006570 451 NNFDPTNLIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR---HLPQSLMQHVELLSKLRH-RHLVSI---------LGHC 516 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l---------~g~~ 516 (640)
.+|...+.||+|+||+||+|+ ..+|+.||||++..... ...+.+.+|+.+++.++| +|.... ...+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 345667899999999999999 56799999999874322 235789999999999987 322111 1111
Q ss_pred Eecc--------cC-CCCCCCeEEEEEEccCCCCHhHHhhcc----CCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCee
Q 006570 517 ILTY--------QD-HPNTGSTVFLVLEHISNGSLRDYLTDW----KKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIF 583 (640)
Q Consensus 517 ~~~~--------~~-~~~~~~~~~lv~Ey~~~GsL~~~l~~~----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 583 (640)
.... .+ ........+++|+++ +|+|.++++.. .....+++..++.++.|+++||+|||+ .+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcc
Confidence 1000 00 000123467777776 67999998521 224457888999999999999999998 7999
Q ss_pred ccCCCCCceeecCCCceEEeCCCCCccccCCCC------c---------c------C--C-CCccceehhhHHHHHHhhc
Q 006570 584 GNNLKTENILLDKALTAKLSGYNIPLPSKVRNT------L---------S------F--H-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 584 HrDlk~~NILl~~~~~~kl~DfGla~~~~~~~~------~---------~------~--~-~~~~DvwS~Gvvl~elltG 639 (640)
||||||+|||++.++.+||+|||+++....... + . . . +.++|||||||++|||+||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg 313 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence 999999999999999999999999875432211 0 0 1 1 5699999999999999998
Q ss_pred C
Q 006570 640 C 640 (640)
Q Consensus 640 ~ 640 (640)
.
T Consensus 314 ~ 314 (413)
T 3dzo_A 314 D 314 (413)
T ss_dssp S
T ss_pred C
Confidence 4
No 319
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=5.8e-26 Score=251.76 Aligned_cols=165 Identities=13% Similarity=0.115 Sum_probs=113.0
Q ss_pred ccccCCccceEEEE-eCCCcEEEEEEeecccC----------CChHHHHHHHHHHhcC-CCcccceeeeEEEecccCCCC
Q 006570 458 LIGEGSQGQLYKGF-LTDGSRVSVKCLKLKQR----------HLPQSLMQHVELLSKL-RHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 458 ~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~~~~~~ 525 (640)
..+.|+.|.+..++ ...|+.+|||.+..... ...++|.+|+++|+++ .|+||+++++++.
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e-------- 312 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE-------- 312 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE--------
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE--------
Confidence 35566666666554 33588999999975421 1235799999999999 7999999999884
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
++...||||||++||+|.++|.. ..+++.. +|+.||+.||+|+|+ .+||||||||+|||+++++.+||+||
T Consensus 313 d~~~~yLVMEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 313 NAQSGWLVMEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp CSSEEEEEEECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCC
T ss_pred ECCEEEEEEecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeec
Confidence 45679999999999999999974 4456653 588999999999999 79999999999999999999999999
Q ss_pred CCCccccCCCCc----------------cCC-CCccceehhhHHHHHHhhc
Q 006570 606 NIPLPSKVRNTL----------------SFH-TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 606 Gla~~~~~~~~~----------------~~~-~~~~DvwS~Gvvl~elltG 639 (640)
|+|+........ .++ ..++|+||+|++++++.+|
T Consensus 384 GlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~ 434 (569)
T 4azs_A 384 GSIVTTPQDCSWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQP 434 (569)
T ss_dssp TTEESCC---CCSHHHHHHHHHHHHHHC-----------------CCCCTT
T ss_pred ccCeeCCCCCccccCceechhhccHHHhCCCCCCcccccccccchhhhccc
Confidence 999876543321 233 7789999999998887654
No 320
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.92 E-value=7.9e-25 Score=244.33 Aligned_cols=253 Identities=21% Similarity=0.194 Sum_probs=152.2
Q ss_pred CCCCCCCCCCCCCCCC---CcccEEeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCC
Q 006570 50 LQGWTDWTNFCYLPSS---SSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNL 126 (640)
Q Consensus 50 l~~W~~~~~~C~~~~~---~~~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L 126 (640)
+..|....++|.|.+. -...+.|....++.|++++++++ .++. ...+.|+.|+|++|.+.. +|. .+++|
T Consensus 12 w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~---~l~~~L~~L~L~~N~l~~-lp~---~l~~L 83 (622)
T 3g06_A 12 WSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPD---CLPAHITTLVIPDNNLTS-LPA---LPPEL 83 (622)
T ss_dssp HHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCS---CCCTTCSEEEECSCCCSC-CCC---CCTTC
T ss_pred HHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccCh---hhCCCCcEEEecCCCCCC-CCC---cCCCC
Confidence 3456655677776420 00012343345677777777764 2221 111566666666666543 333 45666
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCcccc-----------------CCCCCCEEEccCccCCccCC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEIT-----------------SLKNLKSIVLADNLLNGSVP 189 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----------------~l~~L~~L~L~~N~l~~~~~ 189 (640)
++|+|++|.++ .+|. .+++|++|+|++|.|++ +|..+. .+++|++|+|++|+|++.++
T Consensus 84 ~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~~l~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~l~~l~~ 158 (622)
T 3g06_A 84 RTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPA 158 (622)
T ss_dssp CEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCC
T ss_pred CEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCCCCCCcCEEECCCCCCCcCCCCCCCCCEEECcCCcCCCcCC
Confidence 66666666664 3444 44555555555555552 332110 12455555555555555332
Q ss_pred C---ccCc--------------CcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcc
Q 006570 190 D---LQRL--------------VLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNF 252 (640)
Q Consensus 190 ~---~~~l--------------~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 252 (640)
. +..+ ++|+.|+|++|++++ +|..+++|+.|++++|.++ .+|.. +++|+.|+|++|+|
T Consensus 159 ~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L 233 (622)
T 3g06_A 159 LPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRL 233 (622)
T ss_dssp CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCC
T ss_pred ccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCccc-ccCCC---CCCCCEEEccCCcc
Confidence 1 1111 444555555555443 2333445555555555554 23322 36788899999988
Q ss_pred cCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 253 VGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 253 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
++ +| ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..+..+++|+.|++++|++++..+
T Consensus 234 ~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~ 301 (622)
T 3g06_A 234 TS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTL 301 (622)
T ss_dssp SC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHH
T ss_pred Cc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCH
Confidence 86 55 456889999999999975 665 5688999999999999 778889999999999999999987654
No 321
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.92 E-value=4.6e-24 Score=232.27 Aligned_cols=237 Identities=22% Similarity=0.207 Sum_probs=173.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|++.++.+.. ++. ......|++|+|++|.+.+..+ +.++++|++|+|++|.+++..| ++++++|++|+
T Consensus 46 ~~l~~L~l~~~~i~~-l~~--~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-IDG--VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HTCCEEECCSSCCCC-CTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ccccEEecCCCCCcc-Ccc--hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 478889999887743 221 2335799999999999877655 9999999999999999976544 99999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCC--------------------CccCcCcCCeeEccCCCCCCCCCC-
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP--------------------DLQRLVLLEELNLGGNDFGPKFPS- 213 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~--------------------~~~~l~~L~~L~L~~N~l~~~~~~- 213 (640)
|++|.+++. |. +.++++|++|++++|.+++... .+.++++|++|++++|++++...-
T Consensus 119 L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~l~ 196 (466)
T 1o6v_A 119 LFNNQITDI-DP-LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 196 (466)
T ss_dssp CCSSCCCCC-GG-GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGG
T ss_pred CCCCCCCCC-hH-HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCChhhc
Confidence 999999954 43 8999999999999999987532 144556666667777766543221
Q ss_pred cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEE
Q 006570 214 LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFV 293 (640)
Q Consensus 214 ~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L 293 (640)
.+++|+.|++++|.+++..| ++.+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|
T Consensus 197 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 270 (466)
T 1o6v_A 197 KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 270 (466)
T ss_dssp GCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEE
T ss_pred cCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEE
Confidence 15667777777777765544 56667777777777777643 346677777777777777766444 6677777777
Q ss_pred eccCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 294 EISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 294 ~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
++++|++++..| +..+++|+.|++++|.+++..
T Consensus 271 ~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 303 (466)
T 1o6v_A 271 KLGANQISNISP--LAGLTALTNLELNENQLEDIS 303 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCG
T ss_pred ECCCCccCcccc--ccCCCccCeEEcCCCcccCch
Confidence 777777775443 666777777777777777654
No 322
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.91 E-value=7.8e-24 Score=229.03 Aligned_cols=226 Identities=23% Similarity=0.283 Sum_probs=152.6
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|++++|.+++ ++ .+...+.|++|++++|.+.+ +|.. .++|++|+|++|.+++ +| .++++++|++|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp--~~~~l~~L~~L~l~~N~l~~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP--ELQNSSFLKIIDVDNNSLKK-LPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIY 201 (454)
T ss_dssp TTCCEEECCSSCCSS-CC--CCTTCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECcCCCCCC-Cc--ccCCCCCCCEEECCCCcCcc-cCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEE
Confidence 468889999988865 33 24445788888888888765 4433 3578888888888866 56 578888888888
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCc
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS 234 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~ 234 (640)
+++|.+++ +|... ++|++|++++|.++. +|.+..+++|++|++++|++++ +|..+++|+.|++++|++++ +|.
T Consensus 202 l~~N~l~~-l~~~~---~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l~~-l~~ 274 (454)
T 1jl5_A 202 ADNNSLKK-LPDLP---LSLESIVAGNNILEE-LPELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTD-LPE 274 (454)
T ss_dssp CCSSCCSS-CCCCC---TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSC-CCC
T ss_pred CCCCcCCc-CCCCc---CcccEEECcCCcCCc-ccccCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcccc-cCc
Confidence 88888774 55432 477777777777773 4457777777777777777765 34445666666666666664 443
Q ss_pred cccCCCCccEEEccCCcccC--cCCccc-------------cCC-CCCcEEEccCCcCCccCCccccCCCCCCEEeccCc
Q 006570 235 GLKNFDQLKQFDISSNNFVG--PIQSFL-------------FSL-PSILYLNLAGNQLSEALPVNISCSAKLNFVEISHN 298 (640)
Q Consensus 235 ~~~~l~~L~~L~Ls~N~l~~--~~p~~~-------------~~l-~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N 298 (640)
. +++|+.|++++|++++ .+|..+ ..+ ++|++|++++|++++ +|.. +++|+.|++++|
T Consensus 275 ~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N 347 (454)
T 1jl5_A 275 L---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFN 347 (454)
T ss_dssp C---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSS
T ss_pred c---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCC
Confidence 2 2455555555555554 222211 122 478888888888876 5553 478888888888
Q ss_pred cCcccCCCCccCCCCCceeeeccccccCc
Q 006570 299 LLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 299 ~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+++ .+|. .+++|+.+++++|.+++.
T Consensus 348 ~l~-~lp~---~l~~L~~L~L~~N~l~~l 372 (454)
T 1jl5_A 348 HLA-EVPE---LPQNLKQLHVEYNPLREF 372 (454)
T ss_dssp CCS-CCCC---CCTTCCEEECCSSCCSSC
T ss_pred ccc-cccc---hhhhccEEECCCCCCCcC
Confidence 888 4665 367888888888888873
No 323
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.91 E-value=9.5e-24 Score=228.38 Aligned_cols=222 Identities=22% Similarity=0.272 Sum_probs=172.8
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
.+++.|++++|.+++ ++.. ...|+.|++++|.+.+ +|. -.++|++|+|++|.+++ +| .|+++++|++|+
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~-l~~---~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA-LSD---LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIID 159 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC-CCS---CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCc-ccC---CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEE
Confidence 467788888887765 3221 2578888888887754 221 12689999999999976 77 599999999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCc
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS 234 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~ 234 (640)
+++|++++ +|..+ .+|++|++++|++++. |++.++++|++|++++|++++ +|...++|+.|++++|+++ .+|
T Consensus 160 l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~n~l~-~lp- 231 (454)
T 1jl5_A 160 VDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-PELQNLPFLTAIYADNNSLKK-LPDLPLSLESIVAGNNILE-ELP- 231 (454)
T ss_dssp CCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSSCCSS-CCCCCTTCCEEECCSSCCS-SCC-
T ss_pred CCCCcCcc-cCCCc---ccccEEECcCCcCCcC-ccccCCCCCCEEECCCCcCCc-CCCCcCcccEEECcCCcCC-ccc-
Confidence 99999984 67554 5899999999999984 579999999999999999986 5666679999999999998 677
Q ss_pred cccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCC
Q 006570 235 GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLN 314 (640)
Q Consensus 235 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l 314 (640)
.++.+++|+.|++++|++++ +|.. +++|+.|++++|++++ +|.. .++|+.|++++|++++. |.. .+++
T Consensus 232 ~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L 299 (454)
T 1jl5_A 232 ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNL 299 (454)
T ss_dssp CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTC
T ss_pred ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcC
Confidence 48899999999999999986 4543 4789999999999987 5653 37889999999998872 211 1467
Q ss_pred ceeeeccccccCc
Q 006570 315 RTVVSTWNCLSGV 327 (640)
Q Consensus 315 ~~l~l~~N~l~~~ 327 (640)
+.+++++|.+++.
T Consensus 300 ~~L~l~~N~l~~i 312 (454)
T 1jl5_A 300 YYLNASSNEIRSL 312 (454)
T ss_dssp CEEECCSSCCSEE
T ss_pred CEEECcCCcCCcc
Confidence 7777777777763
No 324
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=8.2e-25 Score=224.99 Aligned_cols=198 Identities=16% Similarity=0.113 Sum_probs=173.1
Q ss_pred ccccccccCccCCCChhhhhh--cCCCCCcEeecccCcCcCCCC----ccccCCCCCCEEEcccCcccccCCccccCCCC
Q 006570 100 FSASQQSLSANFNIDRFFTIL--TKLSNLKVLSLVSLGLWGPLP----SKINRFWSLEVLNISSNFIYGEIPMEITSLKN 173 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l--~~l~~L~~L~L~~n~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 173 (640)
..|++|+|++|.+.+..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|.+.+..|..|.++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 459999999999999999888 999999999999999988766 44567999999999999999888899999999
Q ss_pred CCEEEccCccCCc---cCCC--ccCcCcCCeeEccCCCCCCCCC------CcccccceeecccCcccccCCccccCC---
Q 006570 174 LKSIVLADNLLNG---SVPD--LQRLVLLEELNLGGNDFGPKFP------SLSKNIVSVILRNNSLRSEIPSGLKNF--- 239 (640)
Q Consensus 174 L~~L~L~~N~l~~---~~~~--~~~l~~L~~L~L~~N~l~~~~~------~~~~~L~~L~l~~N~l~~~~p~~~~~l--- 239 (640)
|++|+|++|++.+ .++. +..+++|++|+|++|+++...+ ..+++|++|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 9999999999876 3333 4789999999999999974332 125899999999999999889888887
Q ss_pred CCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcc
Q 006570 240 DQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 240 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|++++|+|+.
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 6677664 7999999999999874 44 6788999999999999974
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=7.3e-24 Score=215.55 Aligned_cols=198 Identities=22% Similarity=0.182 Sum_probs=125.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEE
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLN 154 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 154 (640)
..++.+++++++++...... ...++.|+|++|.+.+..+..|.++++|++|+|++|.+++. |. .+.+++|++|+
T Consensus 10 ~~l~~l~~~~~~l~~ip~~~----~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~ 83 (290)
T 1p9a_G 10 ASHLEVNCDKRNLTALPPDL----PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLGTLD 83 (290)
T ss_dssp TTCCEEECTTSCCSSCCSCC----CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCCEEE
T ss_pred CCccEEECCCCCCCcCCCCC----CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC-CCCCCcCCEEE
Confidence 45667777777664221111 13555555555555555555555555555555555555432 22 24555555555
Q ss_pred cccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCC
Q 006570 155 ISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIP 233 (640)
Q Consensus 155 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p 233 (640)
|++|+|+ .+|..+.++++|++|+|++|+|++.++. |.++++|++|+|++| ++++..+
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N---------------------~l~~~~~ 141 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN---------------------ELKTLPP 141 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS---------------------CCCCCCT
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCC---------------------CCCccCh
Confidence 5555555 4555555555555555555555555544 555555555555555 5555555
Q ss_pred ccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCc
Q 006570 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 234 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+. +|..+....+|+.|+|++|.+.
T Consensus 142 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 142 GLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBC
T ss_pred hhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCcc
Confidence 667788888888888888887666677888888888888888874 7777777888888888888875
No 326
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=2.9e-24 Score=213.89 Aligned_cols=159 Identities=21% Similarity=0.215 Sum_probs=114.1
Q ss_pred CCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEc
Q 006570 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNL 202 (640)
Q Consensus 124 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L 202 (640)
++|+.|+|++|.+++..|..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|++.++. |..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 4677777777777777777777778888888888887776666677777888888888877777665 667777777777
Q ss_pred cCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCc
Q 006570 203 GGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282 (640)
Q Consensus 203 ~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 282 (640)
++|++++ ..+..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|++++..+.
T Consensus 115 ~~N~l~~---------------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 115 GGNQLKS---------------------LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CSSCCCC---------------------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CCCcCCC---------------------cChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 7666643 3334456667777777777777766666677777777777777777766666
Q ss_pred cccCCCCCCEEeccCccCccc
Q 006570 283 NISCSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 283 ~~~~~~~L~~L~ls~N~l~~~ 303 (640)
.+..+++|+.|++++|++++.
T Consensus 174 ~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 174 AFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTCTTCCEEECCSCCBCTT
T ss_pred HHhCCCCCCEEEeeCCceeCC
Confidence 677777777777777777654
No 327
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=3.5e-24 Score=211.58 Aligned_cols=199 Identities=12% Similarity=0.068 Sum_probs=115.6
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCc-CcCCCCccccCCCCCCEEEccc-CcccccCCccccCCCCCCEEE
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG-LWGPLPSKINRFWSLEVLNISS-NFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 178 (640)
.++.|+|++|.+.+..+..|.++++|++|+|++|. +++..+..|.++++|++|+|++ |.+++..|..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 55566666666555555556666666666666664 5444444556666666666665 666644445555666666666
Q ss_pred ccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccC-cccccCCccccCCCCcc-EEEccCCcccCcC
Q 006570 179 LADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNN-SLRSEIPSGLKNFDQLK-QFDISSNNFVGPI 256 (640)
Q Consensus 179 L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~ 256 (640)
+++|++++.+ .+..+++|+ .|+.|++++| ++++..+..|.++++|+ .|++++|+++ .+
T Consensus 112 l~~n~l~~lp-~~~~l~~L~------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i 171 (239)
T 2xwt_C 112 IFNTGLKMFP-DLTKVYSTD------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SV 171 (239)
T ss_dssp EEEECCCSCC-CCTTCCBCC------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EE
T ss_pred CCCCCCcccc-ccccccccc------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-cc
Confidence 6666665532 255555554 0114444555 55545555566777777 7777777776 33
Q ss_pred CccccCCCCCcEEEccCCc-CCccCCccccCC-CCCCEEeccCccCcccCCCCccCCCCCceeeeccc
Q 006570 257 QSFLFSLPSILYLNLAGNQ-LSEALPVNISCS-AKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWN 322 (640)
Q Consensus 257 p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~-~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N 322 (640)
|......++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++..+. .+++++.|+++++
T Consensus 172 ~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 172 QGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 3333333677777777774 766556666667 7777777777777643333 3455666666543
No 328
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=5.2e-24 Score=210.37 Aligned_cols=181 Identities=16% Similarity=0.141 Sum_probs=151.2
Q ss_pred CCcEeecccCcCcCCCCccccCCCCCCEEEcccCc-ccccCCccccCCCCCCEEEccC-ccCCccCCC-ccCcCcCCeeE
Q 006570 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNF-IYGEIPMEITSLKNLKSIVLAD-NLLNGSVPD-LQRLVLLEELN 201 (640)
Q Consensus 125 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~-~~~l~~L~~L~ 201 (640)
+|++|+|++|++++..+..|.++++|++|+|++|. +++..+..|.++++|++|+|++ |++++.++. |.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78899999999977777788889999999999996 8766666788899999999988 888888775 78888888888
Q ss_pred ccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCcc---EEEccCC-cccCcCCccccCCCCCc-EEEccCCcC
Q 006570 202 LGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLK---QFDISSN-NFVGPIQSFLFSLPSIL-YLNLAGNQL 276 (640)
Q Consensus 202 L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l 276 (640)
|++|++++ +|. |..+++|+ .|++++| ++++..+..|.++++|+ +|++++|++
T Consensus 112 l~~n~l~~----------------------lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 112 IFNTGLKM----------------------FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEECCCS----------------------CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCCCCCcc----------------------ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 87777643 444 66677777 9999999 99988888899999999 999999999
Q ss_pred CccCCccccCCCCCCEEeccCcc-CcccCCCCccCC-CCCceeeeccccccCccC
Q 006570 277 SEALPVNISCSAKLNFVEISHNL-LIGKLPSCIGSN-SLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 277 ~~~~p~~~~~~~~L~~L~ls~N~-l~~~~p~~~~~~-~~l~~l~l~~N~l~~~~~ 329 (640)
+...+..+.. ++|+.|++++|+ +++..+..|..+ ++|+.+++++|.+++.++
T Consensus 169 ~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~ 222 (239)
T 2xwt_C 169 TSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPS 222 (239)
T ss_dssp CEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCC
T ss_pred cccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCCh
Confidence 8544444544 899999999995 998778889999 999999999999997654
No 329
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=2.6e-23 Score=207.00 Aligned_cols=179 Identities=19% Similarity=0.122 Sum_probs=156.1
Q ss_pred CCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEcc
Q 006570 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLG 203 (640)
Q Consensus 125 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~ 203 (640)
+.+.++++++.++ .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|.|++.++. |.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3467888888884 5776665 6899999999999988888899999999999999999988876 7888888888887
Q ss_pred CCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCcc
Q 006570 204 GNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVN 283 (640)
Q Consensus 204 ~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 283 (640)
+|+++ +..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..
T Consensus 92 ~n~l~---------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 150 (251)
T 3m19_A 92 NNQLA---------------------SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGA 150 (251)
T ss_dssp TSCCC---------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred CCccc---------------------ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHH
Confidence 77764 344566788999999999999999888888899999999999999999877778
Q ss_pred ccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 284 ISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 284 ~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
|..+++|+.|+|++|++++..|..+..+++|+.+++++|.+++.
T Consensus 151 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 151 FDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999999999999999988888999999999999999999875
No 330
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=1.7e-23 Score=211.40 Aligned_cols=206 Identities=19% Similarity=0.096 Sum_probs=160.0
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEc
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNI 155 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 155 (640)
.++.|++++|.+++.. +..+...+.|++|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|++
T Consensus 29 ~l~~L~ls~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRHLG-SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCEEC-TTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCcccccC-HhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 5899999999885433 223445689999999999998888889999999999999999998888889999999999999
Q ss_pred ccCcccccCCccccCCCCCCEEEccCccCCcc-CCC-ccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCC
Q 006570 156 SSNFIYGEIPMEITSLKNLKSIVLADNLLNGS-VPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIP 233 (640)
Q Consensus 156 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p 233 (640)
++|.+.+..+..+.++++|++|+|++|.+++. +|. +.++++|++|+|++|++++..+.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~-------------------- 167 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT-------------------- 167 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG--------------------
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH--------------------
Confidence 99999977777899999999999999999984 354 89999999999999988654433
Q ss_pred ccccCCCCcc----EEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccC
Q 006570 234 SGLKNFDQLK----QFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKL 304 (640)
Q Consensus 234 ~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~ 304 (640)
.+..+.+|+ .|++++|++++..+..+. ..+|++|+|++|++++..+..+..+++|+.|++++|++++..
T Consensus 168 -~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 168 -DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp -GGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred -HhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 333333333 677777777655444333 346777777777777655555667777777777777776543
No 331
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=8.9e-24 Score=216.94 Aligned_cols=196 Identities=18% Similarity=0.241 Sum_probs=154.4
Q ss_pred hcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCe
Q 006570 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEE 199 (640)
Q Consensus 120 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~ 199 (640)
+..+++|+.|++++|.+.. +| .+..+++|++|+|++|.+++ +|. +.++++|++|+|++|++++. +.+..+++|++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~ 111 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV-SAIAGLQSIKT 111 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC-GGGTTCTTCCE
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc-hhhcCCCCCCE
Confidence 4567788888888888854 55 57888888888888888884 444 88888888888888888875 46888888888
Q ss_pred eEccCCCCCCCCC-CcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCc
Q 006570 200 LNLGGNDFGPKFP-SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278 (640)
Q Consensus 200 L~L~~N~l~~~~~-~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 278 (640)
|+|++|++++..+ ..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 112 L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 112 LDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp EECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred EECCCCCCCCchhhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc
Confidence 8888888876543 126788888888888875443 7888889999999998886443 8888889999999998877
Q ss_pred cCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 279 ALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 279 ~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
..+ +..+++|+.|++++|++++..| +..+++|+.+++++|.+++.+
T Consensus 188 ~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 188 ISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp CGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCC
T ss_pred Chh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCC
Confidence 443 7788889999999998886553 788888999999998887643
No 332
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.90 E-value=2.2e-24 Score=237.91 Aligned_cols=213 Identities=21% Similarity=0.278 Sum_probs=136.2
Q ss_pred CCCCCCCCCCCCCCCCCcccE-EeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcE
Q 006570 50 LQGWTDWTNFCYLPSSSSLKI-VCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKV 128 (640)
Q Consensus 50 l~~W~~~~~~C~~~~~~~~gv-~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~ 128 (640)
+.+|..+.++|.-....|.++ .|..++++.|+|++|++++ + |..+ +++|++
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-l-------------------------p~~l--~~~L~~ 84 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-L-------------------------PDNL--PPQITV 84 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-C-------------------------CSCC--CTTCSE
T ss_pred HHHHhccCCccccccchhhhccccccCCccEEEeCCCCCCc-c-------------------------CHhH--cCCCCE
Confidence 446766678884211123478 7876788888888887743 2 2212 245666
Q ss_pred eecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCC
Q 006570 129 LSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFG 208 (640)
Q Consensus 129 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~ 208 (640)
|+|++|.|+ .+| ..+++|++|+|++|.|++ +|. +.+ +|++|+|++|+|+++++ .+++|++|+|++|+|+
T Consensus 85 L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~ 153 (571)
T 3cvr_A 85 LEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTMLPE---LPALLEYINADNNQLT 153 (571)
T ss_dssp EECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCS
T ss_pred EECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCCCCC---cCccccEEeCCCCccC
Confidence 777777664 455 345667777777777764 555 544 67777777777766433 5667777777777776
Q ss_pred CCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCC-------cEEEccCCcCCccCC
Q 006570 209 PKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSI-------LYLNLAGNQLSEALP 281 (640)
Q Consensus 209 ~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~l~~N~l~~~~p 281 (640)
+ +|..+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+. +|
T Consensus 154 ~-lp~~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp 223 (571)
T 3cvr_A 154 M-LPELPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IP 223 (571)
T ss_dssp C-CCCCCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCC-CC
T ss_pred c-CCCcCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cC
Confidence 5 44456677777777777765 555 54 67777777777777 4555 443 55 777777777764 66
Q ss_pred ccccCCCCCCEEeccCccCcccCCCCccCC
Q 006570 282 VNISCSAKLNFVEISHNLLIGKLPSCIGSN 311 (640)
Q Consensus 282 ~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~ 311 (640)
..+..+++|+.|+|++|+|++.+|..+..+
T Consensus 224 ~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 224 ENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp GGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 666667777777777777777776665543
No 333
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=3e-25 Score=235.58 Aligned_cols=229 Identities=19% Similarity=0.158 Sum_probs=191.5
Q ss_pred ccccccccCccCCCChhh----hhhcCCCCCcEeecccC---cCcCCCCccc-------cCCCCCCEEEcccCcccc---
Q 006570 100 FSASQQSLSANFNIDRFF----TILTKLSNLKVLSLVSL---GLWGPLPSKI-------NRFWSLEVLNISSNFIYG--- 162 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~----~~l~~l~~L~~L~L~~n---~l~~~~p~~~-------~~l~~L~~L~Ls~N~l~~--- 162 (640)
+.++.|+|++|.+.+..+ ..|..+++|++|+|++| .+++.+|..+ ..+++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 578888999988877644 44779999999999996 5556677655 789999999999999997
Q ss_pred -cCCccccCCCCCCEEEccCccCCccCCC-----ccCc---------CcCCeeEccCCCCC-CCCCC------cccccce
Q 006570 163 -EIPMEITSLKNLKSIVLADNLLNGSVPD-----LQRL---------VLLEELNLGGNDFG-PKFPS------LSKNIVS 220 (640)
Q Consensus 163 -~~p~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~l---------~~L~~L~L~~N~l~-~~~~~------~~~~L~~ 220 (640)
.+|..+..+++|++|+|++|.++...+. +..+ ++|++|+|++|+++ +.++. .+++|+.
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 5888899999999999999999755442 3444 89999999999998 44442 2579999
Q ss_pred eecccCccc--c---cCCccccCCCCccEEEccCCccc----CcCCccccCCCCCcEEEccCCcCCcc----CCcccc--
Q 006570 221 VILRNNSLR--S---EIPSGLKNFDQLKQFDISSNNFV----GPIQSFLFSLPSILYLNLAGNQLSEA----LPVNIS-- 285 (640)
Q Consensus 221 L~l~~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~-- 285 (640)
|+|++|+++ | .+|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|++++. +|..+.
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 271 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKL 271 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTC
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhc
Confidence 999999998 3 45558899999999999999996 67888899999999999999999875 566663
Q ss_pred CCCCCCEEeccCccCcc----cCCCCc-cCCCCCceeeeccccccCcc
Q 006570 286 CSAKLNFVEISHNLLIG----KLPSCI-GSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 286 ~~~~L~~L~ls~N~l~~----~~p~~~-~~~~~l~~l~l~~N~l~~~~ 328 (640)
.+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|.+++..
T Consensus 272 ~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 272 ENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp SSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred cCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 48999999999999998 488777 66899999999999998743
No 334
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=6.2e-23 Score=210.63 Aligned_cols=189 Identities=20% Similarity=0.245 Sum_probs=156.0
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
.++.|++++|.+.. ++ .+..+++|++|+|++|.+++ +|. +..+++|++|+|++|.+++ +| .+..+++|++|+|+
T Consensus 42 ~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLT 115 (308)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECT
T ss_pred CcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECC
Confidence 45555555555443 23 57889999999999999965 444 8999999999999999985 44 68889999999999
Q ss_pred CccCCccCCCccCcCcCCeeEccCCCCCCCCCC-cccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCcc
Q 006570 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS-LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSF 259 (640)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 259 (640)
+|++++.+ .+..+++|++|+|++|++++..+- .+++|+.|++++|++++. +. +.++++|+.|+|++|++++..+
T Consensus 116 ~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-- 190 (308)
T 1h6u_A 116 STQITDVT-PLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISP-- 190 (308)
T ss_dssp TSCCCCCG-GGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--
T ss_pred CCCCCCch-hhcCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChh--
Confidence 99998864 488999999999999999876542 268899999999999864 43 8999999999999999997544
Q ss_pred ccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcc
Q 006570 260 LFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 260 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
+..+++|++|+|++|++++..| +..+++|+.|++++|++++
T Consensus 191 l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 191 LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 8899999999999999987553 8899999999999999985
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=1.1e-24 Score=229.06 Aligned_cols=246 Identities=18% Similarity=0.121 Sum_probs=180.6
Q ss_pred EEecCCCCCCCCCCCCcCCC-ccccccccCccCCCChhh----hhhcCCC-CCcEeecccCcCcCCCCccccCC-----C
Q 006570 80 LTVIGNKSSPAHSPKPTFGK-FSASQQSLSANFNIDRFF----TILTKLS-NLKVLSLVSLGLWGPLPSKINRF-----W 148 (640)
Q Consensus 80 l~l~~~~~~~~~~~~~~~~~-~~l~~l~l~~n~~~~~~~----~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~ 148 (640)
.+++.+++++.++. +... ..++.|+|++|.+.+..+ ..|.+++ +|++|+|++|.+++..+..+..+ +
T Consensus 3 ~~ls~n~~~~~~~~--~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 3 YKLTLHPGSNPVEE--FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EECCCCTTCCHHHH--HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred cccccccchHHHHH--HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 45666666554321 1222 358888999888877666 6788888 89999999999987777777665 8
Q ss_pred CCCEEEcccCcccccCCcccc----CC-CCCCEEEccCccCCccCCC-----ccC-cCcCCeeEccCCCCCCCCCCc---
Q 006570 149 SLEVLNISSNFIYGEIPMEIT----SL-KNLKSIVLADNLLNGSVPD-----LQR-LVLLEELNLGGNDFGPKFPSL--- 214 (640)
Q Consensus 149 ~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~~~~-----~~~-l~~L~~L~L~~N~l~~~~~~~--- 214 (640)
+|++|+|++|.+++..+..+. .+ ++|++|+|++|+|++..+. +.. .++|++|+|++|+++...+..
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 899999999999876666443 44 8899999999998877663 333 358999999999887544322
Q ss_pred ----c-cccceeecccCcccccCCcccc----CC-CCccEEEccCCcccCc----CCccccC-CCCCcEEEccCCcCCcc
Q 006570 215 ----S-KNIVSVILRNNSLRSEIPSGLK----NF-DQLKQFDISSNNFVGP----IQSFLFS-LPSILYLNLAGNQLSEA 279 (640)
Q Consensus 215 ----~-~~L~~L~l~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~l~~N~l~~~ 279 (640)
. ++|++|+|++|++++..+..+. .+ ++|+.|||++|+|++. ++..+.. .++|++|+|++|++++.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 2 4899999999999877665444 44 5899999999998863 4455555 35899999999998764
Q ss_pred CC----ccccCCCCCCEEeccCccCccc-------CCCCccCCCCCceeeeccccccCc
Q 006570 280 LP----VNISCSAKLNFVEISHNLLIGK-------LPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 280 ~p----~~~~~~~~L~~L~ls~N~l~~~-------~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
.+ ..+..+++|+.|++++|.+.+. ++..+..++.|+.+++++|.+...
T Consensus 241 ~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 241 SLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp CHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 43 3456778899999999985533 334677788888999999987764
No 336
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=6.1e-25 Score=228.45 Aligned_cols=253 Identities=14% Similarity=0.102 Sum_probs=197.4
Q ss_pred ccEEeCCCcEEEEEecCCCCCCCCCCCCcCCC--ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCC-CCccc
Q 006570 68 LKIVCTNSRVTELTVIGNKSSPAHSPKPTFGK--FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGP-LPSKI 144 (640)
Q Consensus 68 ~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~--~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~-~p~~~ 144 (640)
.++.|+...++.++++++.+.+.. .... ..++.+++++|.+.+..+. +..+++|++|+|++|.+++. +|..+
T Consensus 40 ~~~~~~~~~~~~l~l~~~~~~~~~----~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~ 114 (336)
T 2ast_B 40 YRLASDESLWQTLDLTGKNLHPDV----TGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGIL 114 (336)
T ss_dssp HHHHTCSTTSSEEECTTCBCCHHH----HHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHH
T ss_pred HHHhcCchhheeeccccccCCHHH----HHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHH
Confidence 367776666888999988763110 1111 5788899999988777665 66799999999999998766 88888
Q ss_pred cCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCc-cCCcc-CCC-ccCcCcCCeeEccCC-CCCCC-CCCc---cc
Q 006570 145 NRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADN-LLNGS-VPD-LQRLVLLEELNLGGN-DFGPK-FPSL---SK 216 (640)
Q Consensus 145 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~~~-~~~l~~L~~L~L~~N-~l~~~-~~~~---~~ 216 (640)
..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. ++. +.++++|++|+|++| .+++. ++.. ++
T Consensus 115 ~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~ 194 (336)
T 2ast_B 115 SQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVS 194 (336)
T ss_dssp TTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSC
T ss_pred hhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcc
Confidence 99999999999999999888889999999999999999 68753 444 788999999999999 88754 3332 67
Q ss_pred -ccceeecccC--ccc-ccCCccccCCCCccEEEccCCc-ccCcCCccccCCCCCcEEEccCCc-CCccCCccccCCCCC
Q 006570 217 -NIVSVILRNN--SLR-SEIPSGLKNFDQLKQFDISSNN-FVGPIQSFLFSLPSILYLNLAGNQ-LSEALPVNISCSAKL 290 (640)
Q Consensus 217 -~L~~L~l~~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~~~L 290 (640)
+|++|++++| .++ +.+|..+.++++|+.|+|++|. +++..+..+..+++|++|++++|. ++......+..+++|
T Consensus 195 ~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L 274 (336)
T 2ast_B 195 ETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTL 274 (336)
T ss_dssp TTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTC
T ss_pred cCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCC
Confidence 9999999999 555 5677778889999999999999 777778889999999999999995 322222257889999
Q ss_pred CEEeccCccCcccCCCCccCC-CCCceeeeccccccCccC
Q 006570 291 NFVEISHNLLIGKLPSCIGSN-SLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 291 ~~L~ls~N~l~~~~p~~~~~~-~~l~~l~l~~N~l~~~~~ 329 (640)
+.|++++| ++ ...+..+ ..+..|++++|.+++..|
T Consensus 275 ~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 275 KTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIAR 310 (336)
T ss_dssp CEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTC
T ss_pred CEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccC
Confidence 99999998 33 2233333 246777889999998765
No 337
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=2.4e-22 Score=221.61 Aligned_cols=181 Identities=23% Similarity=0.264 Sum_probs=158.1
Q ss_pred CCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccC
Q 006570 125 NLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGG 204 (640)
Q Consensus 125 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~ 204 (640)
+|+.|+|++|++++ +|..+. ++|++|+|++|.|+ .+| ..+++|++|+|++|+|+++++ +.+ +|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTLPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCCCC-CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCcch-hhc--CCCEEECCC
Confidence 89999999999976 887663 89999999999999 788 457999999999999999655 665 999999999
Q ss_pred CCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccc
Q 006570 205 NDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284 (640)
Q Consensus 205 N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 284 (640)
|+|++..+ .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. +
T Consensus 130 N~l~~lp~-~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~ 198 (571)
T 3cvr_A 130 NQLTMLPE-LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-V 198 (571)
T ss_dssp SCCSCCCC-CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-C
T ss_pred CcCCCCCC-cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-H
Confidence 99998444 88999999999999996 666 57899999999999997 666 65 89999999999998 4776 6
Q ss_pred cCCCCC-------CEEeccCccCcccCCCCccCCCCCceeeeccccccCccC
Q 006570 285 SCSAKL-------NFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 285 ~~~~~L-------~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
.. +| +.|+|++|+|+ .+|..+..+++|+.|++++|++++..|
T Consensus 199 ~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 199 PV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp C----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred HH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 54 77 99999999999 588888889999999999999998654
No 338
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=1.7e-22 Score=194.96 Aligned_cols=162 Identities=19% Similarity=0.181 Sum_probs=115.2
Q ss_pred CCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEc
Q 006570 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNL 202 (640)
Q Consensus 124 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L 202 (640)
++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++.++. |.++++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 4677788888888765566677788888888888888755555577788888888888888777666 677777777777
Q ss_pred cCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCc
Q 006570 203 GGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPV 282 (640)
Q Consensus 203 ~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 282 (640)
++|++++ ..+..|.++++|+.|+|++|++++..+..+..+++|++|+|++|.+.+
T Consensus 108 ~~N~l~~---------------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 108 NTNQLQS---------------------LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CSSCCCC---------------------CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred CCCcCcc---------------------cCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 7766643 333445667777777777777776666566777777777777776654
Q ss_pred cccCCCCCCEEeccCccCcccCCCCccCCCC
Q 006570 283 NISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313 (640)
Q Consensus 283 ~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 313 (640)
.+++|+.|+++.|+++|.+|..++.+..
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3456777777777777777777766543
No 339
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=4.8e-22 Score=207.88 Aligned_cols=219 Identities=12% Similarity=0.072 Sum_probs=173.6
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCC-ccccCCCCCCE-EEcccCcccccCCccccCCCCCCEE
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLP-SKINRFWSLEV-LNISSNFIYGEIPMEITSLKNLKSI 177 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L 177 (640)
.+++.|+|++|.+....+.+|.++++|++|+|++|.+.+.+| ..|.++++|++ ++++.|+|+...|..|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 578999999999987767789999999999999999977776 46889998875 6777899997778889999999999
Q ss_pred EccCccCCccCCC-ccCcCcCCeeEccC-CCCCCCCCCc----ccccceeecccCcccccCCccccCCCCccEEEccC-C
Q 006570 178 VLADNLLNGSVPD-LQRLVLLEELNLGG-NDFGPKFPSL----SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISS-N 250 (640)
Q Consensus 178 ~L~~N~l~~~~~~-~~~l~~L~~L~L~~-N~l~~~~~~~----~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~-N 250 (640)
++++|+|++.++. +....++..|++.+ |++....+.. ...++.|+|++|+|+. +|.......+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCC
Confidence 9999999988876 67778889999976 5665444433 3568889999999985 555555667899999985 6
Q ss_pred cccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccc
Q 006570 251 NFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC 323 (640)
Q Consensus 251 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~ 323 (640)
.++...+..|..+++|++|||++|+|+...+..+ .+|+.|.+.++.--..+|. +..+++|+.++++++.
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP~-l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLPT-LEKLVALMEASLTYPS 257 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCCC-TTTCCSCCEEECSCHH
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCCC-chhCcChhhCcCCCCc
Confidence 6765555678999999999999999987544444 5566666655543446774 7788899999887654
No 340
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=5.3e-22 Score=191.50 Aligned_cols=173 Identities=20% Similarity=0.158 Sum_probs=139.9
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGN 205 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N 205 (640)
+.++.++++++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++.++. |..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 35666677763 456444 45788888888888866666678888888888888888877766 677777777777776
Q ss_pred CCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCcccc
Q 006570 206 DFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285 (640)
Q Consensus 206 ~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 285 (640)
+++ +..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..+.
T Consensus 87 ~l~---------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 145 (208)
T 2o6s_A 87 QLQ---------------------SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFD 145 (208)
T ss_dssp CCC---------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred cCC---------------------ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhc
Confidence 653 34455678899999999999999988888899999999999999999987777789
Q ss_pred CCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCccCC
Q 006570 286 CSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVNTK 330 (640)
Q Consensus 286 ~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~~~ 330 (640)
.+++|+.|++++|.+.+. ++.++.++++.|.++|..|.
T Consensus 146 ~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~ip~ 183 (208)
T 2o6s_A 146 RLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 183 (208)
T ss_dssp TCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTBBC
T ss_pred cCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCceeec
Confidence 999999999999988764 45689999999999998763
No 341
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=2.1e-23 Score=219.36 Aligned_cols=224 Identities=22% Similarity=0.204 Sum_probs=185.6
Q ss_pred cccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCC----ccccCCC-CCCEEEcccCcccccCCccccCC-----CCC
Q 006570 105 QSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLP----SKINRFW-SLEVLNISSNFIYGEIPMEITSL-----KNL 174 (640)
Q Consensus 105 l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L 174 (640)
.+|+.|.+.+.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5678899999999988888889999999999977666 7788999 99999999999998878777775 999
Q ss_pred CEEEccCccCCccCCC-----ccCc-CcCCeeEccCCCCCCCCCCc--------ccccceeecccCcccccC----Cccc
Q 006570 175 KSIVLADNLLNGSVPD-----LQRL-VLLEELNLGGNDFGPKFPSL--------SKNIVSVILRNNSLRSEI----PSGL 236 (640)
Q Consensus 175 ~~L~L~~N~l~~~~~~-----~~~l-~~L~~L~L~~N~l~~~~~~~--------~~~L~~L~l~~N~l~~~~----p~~~ 236 (640)
++|+|++|.+++..+. +..+ ++|++|+|++|++++..+.. .++|++|+|++|+++... +..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 9999999999987775 4455 89999999999998776543 259999999999998543 3445
Q ss_pred cCCC-CccEEEccCCcccCcCCcccc----CC-CCCcEEEccCCcCCcc----CCccccC-CCCCCEEeccCccCcccCC
Q 006570 237 KNFD-QLKQFDISSNNFVGPIQSFLF----SL-PSILYLNLAGNQLSEA----LPVNISC-SAKLNFVEISHNLLIGKLP 305 (640)
Q Consensus 237 ~~l~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~l~~N~l~~~----~p~~~~~-~~~L~~L~ls~N~l~~~~p 305 (640)
..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|+|++. ++..+.. .++|+.|||++|++++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 5665 999999999999987776554 44 6999999999999763 4555555 4699999999999987654
Q ss_pred ----CCccCCCCCceeeeccccccCcc
Q 006570 306 ----SCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 306 ----~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
..+..++.|+.|++++|.+++..
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~ 269 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMS 269 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCC
T ss_pred HHHHHHHhcCCCccEEEeccCCccccC
Confidence 34567789999999999976543
No 342
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.86 E-value=2.9e-23 Score=237.04 Aligned_cols=262 Identities=16% Similarity=0.122 Sum_probs=96.8
Q ss_pred CHHHHHHHHHHHHhCCCC--CCCCCCCCC-CCCCCCCCCCcccEEeCCCcEEEEEecCCCCCCCCCCCCcCCCccccccc
Q 006570 30 TPSETRILFQVQKLLEYP--EVLQGWTDW-TNFCYLPSSSSLKIVCTNSRVTELTVIGNKSSPAHSPKPTFGKFSASQQS 106 (640)
Q Consensus 30 ~~~~~~~l~~~k~~~~~~--~~l~~W~~~-~~~C~~~~~~~~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~ 106 (640)
...+.++|+++......+ ..-..|... +..+.|. ++.++..+++.|+|.++.+.... ...++.++
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~s~~~~~~l~L~~n~~~~~~-------~~~l~~l~ 197 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTAT-----NSAVSTPLTPKIELFANGKDEAN-------QALLQHKK 197 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCC-----CceecCCccceEEeeCCCCCcch-------hhHhhcCc
Confidence 346778899988766322 123356433 3445565 68888889999999988774321 12345555
Q ss_pred cCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCc
Q 006570 107 LSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNG 186 (640)
Q Consensus 107 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 186 (640)
|+.|.+.+ ++++.|.+. ..|..+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+.
T Consensus 198 Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~ 261 (727)
T 4b8c_D 198 LSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTE 261 (727)
T ss_dssp ---------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSC
T ss_pred cCcccccC--------------cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcc
Confidence 66554422 233333332 33444445555555555555554 444444445555555555555553
Q ss_pred cCCCccCcCcCCeeEccCCCCCCCCCCc---ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCC
Q 006570 187 SVPDLQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSL 263 (640)
Q Consensus 187 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 263 (640)
+++.|.+|++|++|+|++|+|+ .+|.. +++|+.|+|++|.|+ .+|..|++|++|+.|+|++|.|++.+|..+..+
T Consensus 262 lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 262 LPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp CCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred cChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 3333455555555555555554 22322 345555555555554 678888999999999999999998888887654
Q ss_pred CC-CcEEEccCCcCCccCCccccCCCCCCEEeccCc--------cCcccCCCCccCCCCCceeeeccccccCc
Q 006570 264 PS-ILYLNLAGNQLSEALPVNISCSAKLNFVEISHN--------LLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 264 ~~-L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N--------~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
.. +..|+|++|.+++.+|.. |+.|++++| .|.+..+..+.++..+....+++|.+++.
T Consensus 340 ~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 340 SVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp HHHHHHHHHHHCCCCCCCCCC-----------------------------------------------CCCGG
T ss_pred chhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeeccccccc
Confidence 32 234789999998887764 456667766 44444445556666777788888888754
No 343
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=1.5e-22 Score=204.73 Aligned_cols=144 Identities=14% Similarity=0.122 Sum_probs=114.5
Q ss_pred HHHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCC------------------ChHHHHHHHHHHhcCCC
Q 006570 445 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH------------------LPQSLMQHVELLSKLRH 506 (640)
Q Consensus 445 ~l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~h 506 (640)
.+......|...+.||+|+||.||+|+..+|+.||||.++..... ....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 344445556677999999999999999977999999999643211 2356899999999998
Q ss_pred cccceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccC
Q 006570 507 RHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNN 586 (640)
Q Consensus 507 ~niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrD 586 (640)
| +++.+++. ....++||||+++|+|.+ +.. .....++.|++.||+|||+ .+|+|||
T Consensus 163 -~-~~v~~~~~---------~~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~---~giiHrD 218 (282)
T 1zar_A 163 -G-LAVPKVYA---------WEGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYH---RGIVHGD 218 (282)
T ss_dssp -T-SSSCCEEE---------EETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred -C-CCcCeEEe---------ccceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHH---CCCEeCC
Confidence 4 66666442 123599999999999988 521 1245799999999999998 7999999
Q ss_pred CCCCceeecCCCceEEeCCCCCccccCC
Q 006570 587 LKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 587 lk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
|||+|||++ ++.+||+|||+++.....
T Consensus 219 lkp~NILl~-~~~vkl~DFG~a~~~~~~ 245 (282)
T 1zar_A 219 LSQYNVLVS-EEGIWIIDFPQSVEVGEE 245 (282)
T ss_dssp CSTTSEEEE-TTEEEECCCTTCEETTST
T ss_pred CCHHHEEEE-CCcEEEEECCCCeECCCC
Confidence 999999999 999999999999876544
No 344
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.86 E-value=8.3e-21 Score=211.86 Aligned_cols=198 Identities=20% Similarity=0.222 Sum_probs=129.8
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
.++.|++++|.+. .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 5788999999886 6676665 89999999999996 5776 5799999999999999 6776 67999999999
Q ss_pred CccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCcccc-----------------CCCCcc
Q 006570 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLK-----------------NFDQLK 243 (640)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~-----------------~l~~L~ 243 (640)
+|.|++.++ .+++|+.|+|++|+++. +|..+++|+.|+|++|++++ +|..+. .+++|+
T Consensus 110 ~N~l~~l~~---~l~~L~~L~L~~N~l~~-lp~~l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~ 184 (622)
T 3g06_A 110 SNPLTHLPA---LPSGLCKLWIFGNQLTS-LPVLPPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQ 184 (622)
T ss_dssp SCCCCCCCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCC
T ss_pred CCcCCCCCC---CCCCcCEEECCCCCCCc-CCCCCCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCc
Confidence 999998765 45667777777777665 34445666666666666664 232222 126667
Q ss_pred EEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeecccc
Q 006570 244 QFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNC 323 (640)
Q Consensus 244 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~ 323 (640)
.|+|++|+|++ +|.. +++|+.|++++|+++. +|. .+++|+.|++++|+|++ +| ..+++|+.|++++|.
T Consensus 185 ~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~ 252 (622)
T 3g06_A 185 ELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNR 252 (622)
T ss_dssp EEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSC
T ss_pred EEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCC
Confidence 77777777764 3322 2344444444444432 222 12455555555555553 33 233445555555555
Q ss_pred ccC
Q 006570 324 LSG 326 (640)
Q Consensus 324 l~~ 326 (640)
++.
T Consensus 253 L~~ 255 (622)
T 3g06_A 253 LTS 255 (622)
T ss_dssp CSC
T ss_pred CCc
Confidence 554
No 345
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=1.2e-22 Score=211.07 Aligned_cols=218 Identities=14% Similarity=0.145 Sum_probs=185.9
Q ss_pred cccccccCccCCCChhhhhhcCC--CCCcEeecccCcCcCCCCccccCCCCCCEEEcccCccccc-CCccccCCCCCCEE
Q 006570 101 SASQQSLSANFNIDRFFTILTKL--SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGE-IPMEITSLKNLKSI 177 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 177 (640)
..+.+++++|.+. +..+..+ ++++.|++++|.+.+..|. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4678899988775 5667777 8999999999999887665 67899999999999999876 88889999999999
Q ss_pred EccCccCCccCCC-ccCcCcCCeeEccCC-CCCCC-CCCc---ccccceeecccC-ccccc-CCccccCCC-CccEEEcc
Q 006570 178 VLADNLLNGSVPD-LQRLVLLEELNLGGN-DFGPK-FPSL---SKNIVSVILRNN-SLRSE-IPSGLKNFD-QLKQFDIS 248 (640)
Q Consensus 178 ~L~~N~l~~~~~~-~~~l~~L~~L~L~~N-~l~~~-~~~~---~~~L~~L~l~~N-~l~~~-~p~~~~~l~-~L~~L~Ls 248 (640)
+|++|.+++..+. +..+++|++|+|++| .+++. ++.. +++|++|++++| .+++. ++..+..++ +|++|+|+
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 9999999977665 888999999999999 67753 4442 789999999999 99865 677788999 99999999
Q ss_pred CC--ccc-CcCCccccCCCCCcEEEccCCc-CCccCCccccCCCCCCEEeccCcc-CcccCCCCccCCCCCceeeeccc
Q 006570 249 SN--NFV-GPIQSFLFSLPSILYLNLAGNQ-LSEALPVNISCSAKLNFVEISHNL-LIGKLPSCIGSNSLNRTVVSTWN 322 (640)
Q Consensus 249 ~N--~l~-~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~~~L~~L~ls~N~-l~~~~p~~~~~~~~l~~l~l~~N 322 (640)
+| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 99 555 4667788899999999999999 777788889999999999999995 32222225788999999999988
No 346
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=1.9e-23 Score=221.62 Aligned_cols=231 Identities=20% Similarity=0.230 Sum_probs=186.1
Q ss_pred CcEEEEEecCCCCCCCCCC---CCcCCCccccccccCcc---CCCChhhhh-------hcCCCCCcEeecccCcCcC---
Q 006570 75 SRVTELTVIGNKSSPAHSP---KPTFGKFSASQQSLSAN---FNIDRFFTI-------LTKLSNLKVLSLVSLGLWG--- 138 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~---~~~~~~~~l~~l~l~~n---~~~~~~~~~-------l~~l~~L~~L~L~~n~l~~--- 138 (640)
.+++.|+|++|.++..... ......+.|+.|+|++| .+.+.+|.. |..+++|++|+|++|.+++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 4689999999977432110 00123478999999986 444555654 4899999999999999987
Q ss_pred -CCCccccCCCCCCEEEcccCcccccCCcccc----CC---------CCCCEEEccCccCC-ccCC----CccCcCcCCe
Q 006570 139 -PLPSKINRFWSLEVLNISSNFIYGEIPMEIT----SL---------KNLKSIVLADNLLN-GSVP----DLQRLVLLEE 199 (640)
Q Consensus 139 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~~----~~~~l~~L~~ 199 (640)
.+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.++ .+..+++|++
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 4788899999999999999999855444443 34 89999999999998 4444 3778899999
Q ss_pred eEccCCCCCC-----CCC-C--cccccceeecccCccc----ccCCccccCCCCccEEEccCCcccCc----CCccc--c
Q 006570 200 LNLGGNDFGP-----KFP-S--LSKNIVSVILRNNSLR----SEIPSGLKNFDQLKQFDISSNNFVGP----IQSFL--F 261 (640)
Q Consensus 200 L~L~~N~l~~-----~~~-~--~~~~L~~L~l~~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~--~ 261 (640)
|+|++|+++. ..| . .+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++. +|..+ +
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 271 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKL 271 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTC
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhc
Confidence 9999999972 233 2 3689999999999996 67888999999999999999999876 56666 3
Q ss_pred CCCCCcEEEccCCcCCc----cCCccc-cCCCCCCEEeccCccCcccCC
Q 006570 262 SLPSILYLNLAGNQLSE----ALPVNI-SCSAKLNFVEISHNLLIGKLP 305 (640)
Q Consensus 262 ~l~~L~~L~l~~N~l~~----~~p~~~-~~~~~L~~L~ls~N~l~~~~p 305 (640)
.+++|+.|+|++|++++ .+|..+ .++++|+.|++++|++++..|
T Consensus 272 ~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 272 ENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp SSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred cCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 49999999999999988 478777 668999999999999997654
No 347
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.85 E-value=5.2e-22 Score=218.81 Aligned_cols=159 Identities=16% Similarity=0.154 Sum_probs=119.0
Q ss_pred CCCCccccCCccceEEEEeCCCcEEEEEEeecccCC--------ChHHHHHHHHHHhcCCCcccceeeeEEEecccCCCC
Q 006570 454 DPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRH--------LPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPN 525 (640)
Q Consensus 454 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~~~~ 525 (640)
...+.||+|+||.||+|+. .+..+++|+....... ..+++.+|++++++++||||+++..++..
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~------- 410 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD------- 410 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-------
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-------
Confidence 3467899999999999965 4788999987543211 13458999999999999999966655542
Q ss_pred CCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 526 TGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 526 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
....++||||+++|+|.++++. +..++.|+++||+|||+ .+|+||||||+|||+++ .+||+||
T Consensus 411 -~~~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DF 473 (540)
T 3en9_A 411 -LDNKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDF 473 (540)
T ss_dssp -TTTTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCC
T ss_pred -CCccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEEC
Confidence 2235999999999999999953 56899999999999998 79999999999999998 9999999
Q ss_pred CCCccccCCCC----------c--------------c--CC-CCccceehhhHHHHHHh
Q 006570 606 NIPLPSKVRNT----------L--------------S--FH-TDRSSLYKIILIICVIT 637 (640)
Q Consensus 606 Gla~~~~~~~~----------~--------------~--~~-~~~~DvwS~Gvvl~ell 637 (640)
|+++....... . . .. +..+|+||..+-.+|-+
T Consensus 474 Gla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v 532 (540)
T 3en9_A 474 GLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDV 532 (540)
T ss_dssp TTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHH
T ss_pred ccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99987754211 0 1 12 66789999888777654
No 348
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.85 E-value=2.4e-21 Score=215.97 Aligned_cols=194 Identities=19% Similarity=0.236 Sum_probs=158.2
Q ss_pred cccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEcc
Q 006570 101 SASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLA 180 (640)
Q Consensus 101 ~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 180 (640)
.+..++|..+.+.+..+ +..|++|+.|+|++|.+.. +| .+..+++|+.|+|++|.|++..| +..|++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 44455666666554433 5678889999999999854 55 58899999999999999996554 8899999999999
Q ss_pred CccCCccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCc
Q 006570 181 DNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS 258 (640)
Q Consensus 181 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 258 (640)
+|.|++. |.+..+++|++|+|++|++++. +.. +++|+.|+|++|++++. ..+..+++|+.|+|++|+|++..|
T Consensus 96 ~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 96 ENKIKDL-SSLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp SSCCCCC-TTSTTCTTCCEEECTTSCCCCC-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCCCCC-hhhccCCCCCEEEecCCCCCCC-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 9999874 5788999999999999999874 333 78899999999999865 678899999999999999997766
Q ss_pred cccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCc
Q 006570 259 FLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCI 308 (640)
Q Consensus 259 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~ 308 (640)
+..+++|+.|+|++|+|++. | .+..+++|+.|+|++|++++.....+
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~p~~~~ 217 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKPINHQ 217 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECCCCCCC
T ss_pred -hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCCccccc
Confidence 88999999999999999874 4 58889999999999999986544333
No 349
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.85 E-value=2.6e-21 Score=196.83 Aligned_cols=185 Identities=19% Similarity=0.265 Sum_probs=127.1
Q ss_pred ccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCcc
Q 006570 104 QQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL 183 (640)
Q Consensus 104 ~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 183 (640)
.+.+..+.+.+.. .+..+++|+.|++++|.+.. +| .+..+++|++|+|++|++++..| +.++++|++|+|++|+
T Consensus 28 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~ 101 (291)
T 1h6t_A 28 KDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENK 101 (291)
T ss_dssp HHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred HHHhcCCCccccc--chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCc
Confidence 3444544443322 24567888889999888854 44 48888899999999998885444 8888899999999998
Q ss_pred CCccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCcccc
Q 006570 184 LNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLF 261 (640)
Q Consensus 184 l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 261 (640)
+++. |.+..+++|++|+|++|++++. +.. +++|+.|++++|++++. ..+..+++|+.|+|++|++++..| +.
T Consensus 102 l~~~-~~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~ 175 (291)
T 1h6t_A 102 VKDL-SSLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LA 175 (291)
T ss_dssp CCCG-GGGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred CCCC-hhhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hc
Confidence 8874 4588888888888888888663 322 56666666666666643 456666666666666666665443 66
Q ss_pred CCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcc
Q 006570 262 SLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 262 ~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
.+++|+.|+|++|++++ +|. +..+++|+.|++++|+++.
T Consensus 176 ~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 176 GLTKLQNLYLSKNHISD-LRA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp TCTTCCEEECCSSCCCB-CGG-GTTCTTCSEEEEEEEEEEC
T ss_pred CCCccCEEECCCCcCCC-Chh-hccCCCCCEEECcCCcccC
Confidence 66666666666666655 332 6666666666666666654
No 350
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=1.1e-20 Score=185.04 Aligned_cols=133 Identities=23% Similarity=0.255 Sum_probs=82.0
Q ss_pred CCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEc
Q 006570 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNL 202 (640)
Q Consensus 124 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L 202 (640)
++|++|+|++|.+++..|..|..+++|++|+|++|+|+...+..|.++++|++|+|++|+|++.++. |..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 5667777777777766677777777777777777777644444566677777777777776666555 455555555555
Q ss_pred cCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCc
Q 006570 203 GGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278 (640)
Q Consensus 203 ~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 278 (640)
++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.++.
T Consensus 120 s~N~l~----------------------~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 120 CCNKLT----------------------ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCC----------------------SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccc----------------------ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 555542 344445555556666666666655444455555555555555555543
No 351
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=1e-20 Score=197.84 Aligned_cols=193 Identities=18% Similarity=0.096 Sum_probs=155.6
Q ss_pred CCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCc-cccCCCCCCE-EEccCccCCccCCC-ccCcCcCCee
Q 006570 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPM-EITSLKNLKS-IVLADNLLNGSVPD-LQRLVLLEEL 200 (640)
Q Consensus 124 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~-L~L~~N~l~~~~~~-~~~l~~L~~L 200 (640)
++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++|+. +.++.|+|+.++|+ |..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 5799999999999765556899999999999999999877775 5889998875 67788999999887 8999999999
Q ss_pred EccCCCCCCCCCCc---ccccceeeccc-CcccccCCccccCCC-CccEEEccCCcccCcCCccccCCCCCcEEEccC-C
Q 006570 201 NLGGNDFGPKFPSL---SKNIVSVILRN-NSLRSEIPSGLKNFD-QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAG-N 274 (640)
Q Consensus 201 ~L~~N~l~~~~~~~---~~~L~~L~l~~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~-N 274 (640)
++++|++....+.. ..++..|++.+ |++....+..|..+. .++.|+|++|+|+. +|.......+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCC
Confidence 99999998766654 34667788855 678766667787775 68999999999995 454555667899999985 6
Q ss_pred cCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCcee
Q 006570 275 QLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTV 317 (640)
Q Consensus 275 ~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l 317 (640)
+++...+..|..+++|+.||+++|+|+...+..+.++..|+.+
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l 231 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRAR 231 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECT
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhc
Confidence 7766555678999999999999999996655556655544443
No 352
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=1.2e-20 Score=191.83 Aligned_cols=193 Identities=20% Similarity=0.188 Sum_probs=164.9
Q ss_pred CCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEc
Q 006570 123 LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNL 202 (640)
Q Consensus 123 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L 202 (640)
+..+..+++..+.+++..+ +..+++|++|++++|.+. .+| .+..+++|++|+|++|++++.++ +..+++|++|+|
T Consensus 23 l~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l 97 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFL 97 (291)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEEC
T ss_pred HHHHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEEC
Confidence 3345556677777755433 567899999999999998 455 48899999999999999999877 999999999999
Q ss_pred cCCCCCCCCC-CcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCC
Q 006570 203 GGNDFGPKFP-SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALP 281 (640)
Q Consensus 203 ~~N~l~~~~~-~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 281 (640)
++|++++..+ ..+++|+.|++++|++++. +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++..|
T Consensus 98 ~~n~l~~~~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 98 DENKVKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CSSCCCCGGGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CCCcCCCChhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 9999987432 1278999999999999864 5789999999999999999975 578999999999999999988655
Q ss_pred ccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 282 VNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 282 ~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
+..+++|+.|++++|++++ +| .+..+++|+.|++++|.++..+
T Consensus 174 --l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECCC
T ss_pred --hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCCc
Confidence 8999999999999999986 45 4889999999999999988643
No 353
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.83 E-value=4.8e-23 Score=223.74 Aligned_cols=252 Identities=18% Similarity=0.114 Sum_probs=179.1
Q ss_pred cEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCC----hhhhhhcCCCCCcEeecccCcCcCCCCccc-cCCC--
Q 006570 76 RVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNID----RFFTILTKLSNLKVLSLVSLGLWGPLPSKI-NRFW-- 148 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~----~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~-~~l~-- 148 (640)
+++.|+|+++.++.......+...+.++.|+|++|.+.+ .++..+..+++|++|+|++|.+....+..+ ..++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 577888888876422100001123578888888888764 456778888889999998888865444333 3344
Q ss_pred --CCCEEEcccCcccc----cCCccccCCCCCCEEEccCccCCccCCC------ccCcCcCCeeEccCCCCCCCCC----
Q 006570 149 --SLEVLNISSNFIYG----EIPMEITSLKNLKSIVLADNLLNGSVPD------LQRLVLLEELNLGGNDFGPKFP---- 212 (640)
Q Consensus 149 --~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~------~~~l~~L~~L~L~~N~l~~~~~---- 212 (640)
+|++|+|++|.++. .+|..+..+++|++|+|++|.+++..+. ....++|++|+|++|++++...
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 68899999888883 5688888888899999988888754332 2235678888888888876432
Q ss_pred Cc---ccccceeecccCcccccCCcccc-----CCCCccEEEccCCcccCc----CCccccCCCCCcEEEccCCcCCccC
Q 006570 213 SL---SKNIVSVILRNNSLRSEIPSGLK-----NFDQLKQFDISSNNFVGP----IQSFLFSLPSILYLNLAGNQLSEAL 280 (640)
Q Consensus 213 ~~---~~~L~~L~l~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~ 280 (640)
.. +++|++|++++|.++...+..+. .+++|+.|+|++|++++. ++..+..+++|++|+|++|++++..
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 22 47888888888888765444443 256888888888888763 4667778888888888888886532
Q ss_pred -----CccccCCCCCCEEeccCccCccc----CCCCccCCCCCceeeeccccccCc
Q 006570 281 -----PVNISCSAKLNFVEISHNLLIGK----LPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 281 -----p~~~~~~~~L~~L~ls~N~l~~~----~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+..+..+++|+.|++++|+++.. +|..+..+++|+.|++++|.++..
T Consensus 244 ~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 244 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH
T ss_pred HHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH
Confidence 23334578888888888888764 566677788888888888887643
No 354
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=1.8e-20 Score=196.85 Aligned_cols=152 Identities=21% Similarity=0.222 Sum_probs=84.5
Q ss_pred CCEEEcccCcccccCCcccc-CCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc---ccccceeecc
Q 006570 150 LEVLNISSNFIYGEIPMEIT-SLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL---SKNIVSVILR 224 (640)
Q Consensus 150 L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~ 224 (640)
|+.|+|++|+|++..+..+. ++++|++|+|++|+|++.++. |.++++|++|+|++|+|+...+.. +++|+.|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 44555555555544444444 455555555555555544443 445555555555555444332221 2344444444
Q ss_pred cCcccccCCccccCCCCccEEEccCCcccCcCCccc---cCCCCCcEEEccCCcCCccCCccccCCCC--CCEEeccCcc
Q 006570 225 NNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFL---FSLPSILYLNLAGNQLSEALPVNISCSAK--LNFVEISHNL 299 (640)
Q Consensus 225 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~~~p~~~~~~~~--L~~L~ls~N~ 299 (640)
+|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|.
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCC
Confidence 445555556677777777777777777775444444 45777777777777777654455665655 3667777776
Q ss_pred Cc
Q 006570 300 LI 301 (640)
Q Consensus 300 l~ 301 (640)
+.
T Consensus 201 ~~ 202 (361)
T 2xot_A 201 LE 202 (361)
T ss_dssp EE
T ss_pred cc
Confidence 65
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=3.8e-20 Score=180.14 Aligned_cols=153 Identities=17% Similarity=0.160 Sum_probs=102.8
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCc-cccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPM-EITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGG 204 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~ 204 (640)
+.+++++|.++ .+|..+. ..+++|+|++|.|++..|. .|.++++|++|+|++|+|++.++. |.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 47778877774 4666553 3457777777777765443 467777777777777777777664 67777776666666
Q ss_pred CCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccc
Q 006570 205 NDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI 284 (640)
Q Consensus 205 N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 284 (640)
|++++ ..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|
T Consensus 91 N~l~~---------------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 149 (220)
T 2v70_A 91 NRLEN---------------------VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF 149 (220)
T ss_dssp SCCCC---------------------CCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTT
T ss_pred CccCc---------------------cCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHh
Confidence 65543 344456666677777777777776666666677777777777777766666666
Q ss_pred cCCCCCCEEeccCccCccc
Q 006570 285 SCSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 285 ~~~~~L~~L~ls~N~l~~~ 303 (640)
..+++|+.|++++|.+.+.
T Consensus 150 ~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 150 DTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TTCTTCCEEECCSCCEECS
T ss_pred cCCCCCCEEEecCcCCcCC
Confidence 6677777777777766543
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=8.2e-20 Score=177.71 Aligned_cols=150 Identities=21% Similarity=0.231 Sum_probs=95.7
Q ss_pred EeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCC
Q 006570 128 VLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGND 206 (640)
Q Consensus 128 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~ 206 (640)
.+++++|+++ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..|. |.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4566666663 4565443 5677777777777765555677777777777777777776554 6667777666666666
Q ss_pred CCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccC
Q 006570 207 FGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISC 286 (640)
Q Consensus 207 l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 286 (640)
|+. ..+..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..
T Consensus 92 l~~---------------------l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 150 (220)
T 2v9t_B 92 ITE---------------------LPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSP 150 (220)
T ss_dssp CCC---------------------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred CCc---------------------cCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhC
Confidence 542 22233455666666666666666666666666666666666666666655555666
Q ss_pred CCCCCEEeccCccCc
Q 006570 287 SAKLNFVEISHNLLI 301 (640)
Q Consensus 287 ~~~L~~L~ls~N~l~ 301 (640)
+++|+.|++++|.+.
T Consensus 151 l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 151 LRAIQTMHLAQNPFI 165 (220)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred CCCCCEEEeCCCCcC
Confidence 666666666666654
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=4.4e-20 Score=205.76 Aligned_cols=168 Identities=23% Similarity=0.231 Sum_probs=141.9
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..|+.|+|++|.+... + .+..|++|+.|+|++|.+++..| +..+++|+.|+|++|.|++ +| .+..|++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 4677778888777543 3 58889999999999999976544 8899999999999999984 44 7889999999999
Q ss_pred cCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC
Q 006570 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ 257 (640)
Q Consensus 180 ~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 257 (640)
++|+|++. +.+..+++|+.|+|++|++++. +.. +++|+.|+|++|+|++..| +..+++|+.|+|++|+|++. |
T Consensus 117 s~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~ 191 (605)
T 1m9s_A 117 EHNGISDI-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R 191 (605)
T ss_dssp TTSCCCCC-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G
T ss_pred cCCCCCCC-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h
Confidence 99999874 6688999999999999999876 433 7899999999999987666 88999999999999999864 4
Q ss_pred ccccCCCCCcEEEccCCcCCcc
Q 006570 258 SFLFSLPSILYLNLAGNQLSEA 279 (640)
Q Consensus 258 ~~~~~l~~L~~L~l~~N~l~~~ 279 (640)
.+..+++|+.|+|++|++++.
T Consensus 192 -~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 192 -ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp -GGTTCTTCSEEECCSEEEECC
T ss_pred -HHccCCCCCEEEccCCcCcCC
Confidence 588999999999999999774
No 358
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.82 E-value=1.3e-22 Score=220.19 Aligned_cols=251 Identities=18% Similarity=0.109 Sum_probs=146.1
Q ss_pred cEEEEEecCCCCCCCC---CCCCcCCCccccccccCccCCCChhhhhh-----cCCCCCcEeecccCcCcCC----CCcc
Q 006570 76 RVTELTVIGNKSSPAH---SPKPTFGKFSASQQSLSANFNIDRFFTIL-----TKLSNLKVLSLVSLGLWGP----LPSK 143 (640)
Q Consensus 76 ~v~~l~l~~~~~~~~~---~~~~~~~~~~l~~l~l~~n~~~~~~~~~l-----~~l~~L~~L~L~~n~l~~~----~p~~ 143 (640)
+++.|+|++|.++..- .+......+.|+.|+|++|.+.+..+..+ ...++|++|+|++|.+++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 5778888887764210 00011233577777888777665444332 2355677777777777653 3455
Q ss_pred ccCCCCCCEEEcccCcccccCCcccc-----CCCCCCEEEccCccCCcc----CCC-ccCcCcCCeeEccCCCCCCCC--
Q 006570 144 INRFWSLEVLNISSNFIYGEIPMEIT-----SLKNLKSIVLADNLLNGS----VPD-LQRLVLLEELNLGGNDFGPKF-- 211 (640)
Q Consensus 144 ~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~~~-~~~l~~L~~L~L~~N~l~~~~-- 211 (640)
+..+++|++|+|++|.+.+..+..+. .+++|++|+|++|.+++. ++. +..+++|++|+|++|+++...
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 66667777777777777654443333 255777777777777653 222 556677777777777665321
Q ss_pred ---C---CcccccceeecccCccccc----CCccccCCCCccEEEccCCcccCcCCccccC-----CCCCcEEEccCCcC
Q 006570 212 ---P---SLSKNIVSVILRNNSLRSE----IPSGLKNFDQLKQFDISSNNFVGPIQSFLFS-----LPSILYLNLAGNQL 276 (640)
Q Consensus 212 ---~---~~~~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l 276 (640)
+ ..+++|++|++++|+++.. ++..+.++++|+.|+|++|.+++..+..+.. .++|++|+|++|.+
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 325 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCC
Confidence 1 1145667777777766643 4555566666777777777665443333332 24666666666666
Q ss_pred Ccc----CCccccCCCCCCEEeccCccCcccCCCCccC-----CCCCceeeeccccccC
Q 006570 277 SEA----LPVNISCSAKLNFVEISHNLLIGKLPSCIGS-----NSLNRTVVSTWNCLSG 326 (640)
Q Consensus 277 ~~~----~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~-----~~~l~~l~l~~N~l~~ 326 (640)
++. +|..+..+++|+.|++++|++++..+..+.. .+.|+.|++++|.+++
T Consensus 326 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred chHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 543 3444555566666666666665543333321 4556666666666653
No 359
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.82 E-value=1.8e-20 Score=187.64 Aligned_cols=171 Identities=22% Similarity=0.286 Sum_probs=120.5
Q ss_pred CCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeE
Q 006570 122 KLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELN 201 (640)
Q Consensus 122 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ 201 (640)
++.++..+++++|.++. ++ .+..+++|++|++++|.++ .+| .+..+++|++|+|++|+|++.++ +.++++|++|+
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~ 91 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEE
Confidence 34555666666666643 33 4666777777777777776 455 56667777777777777776665 67777777777
Q ss_pred ccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCC
Q 006570 202 LGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALP 281 (640)
Q Consensus 202 L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 281 (640)
|++|++++..+...++|+.|+|++|++++ + +.+.++++|+.|+|++|++++. | .+..+++|+.|+|++|++++.
T Consensus 92 L~~N~l~~l~~~~~~~L~~L~L~~N~l~~-~-~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 92 VNRNRLKNLNGIPSACLSRLFLDNNELRD-T-DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp CCSSCCSCCTTCCCSSCCEEECCSSCCSB-S-GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--
T ss_pred CCCCccCCcCccccCcccEEEccCCccCC-C-hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--
Confidence 77777765332223667777777777765 3 3578888888888888888864 3 578888888888888888775
Q ss_pred ccccCCCCCCEEeccCccCccc
Q 006570 282 VNISCSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 282 ~~~~~~~~L~~L~ls~N~l~~~ 303 (640)
..+..+++|+.|++++|++++.
T Consensus 166 ~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSTTCCCCCEEEEEEEEEECC
T ss_pred HHhccCCCCCEEeCCCCcccCC
Confidence 5677888888888888888754
No 360
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=1.6e-19 Score=175.68 Aligned_cols=152 Identities=16% Similarity=0.190 Sum_probs=132.9
Q ss_pred CEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCcccccceeecccCccc
Q 006570 151 EVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLR 229 (640)
Q Consensus 151 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~ 229 (640)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++.++. |..+++|++|+|++|++ +
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i---------------------~ 69 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQI---------------------S 69 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCC---------------------C
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcC---------------------C
Confidence 57888888888 6777665 6888888888888887775 77777777777776665 4
Q ss_pred ccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCcc
Q 006570 230 SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIG 309 (640)
Q Consensus 230 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~ 309 (640)
+..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+.
T Consensus 70 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 149 (220)
T 2v9t_B 70 ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS 149 (220)
T ss_dssp EECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred CcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHh
Confidence 56688899999999999999999987777789999999999999999998899999999999999999999998888899
Q ss_pred CCCCCceeeeccccccC
Q 006570 310 SNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 310 ~~~~l~~l~l~~N~l~~ 326 (640)
.+++|+.+++++|.+..
T Consensus 150 ~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 150 PLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TCTTCCEEECCSSCEEC
T ss_pred CCCCCCEEEeCCCCcCC
Confidence 99999999999998864
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=1.4e-19 Score=176.00 Aligned_cols=153 Identities=14% Similarity=0.147 Sum_probs=132.4
Q ss_pred CEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC--ccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcc
Q 006570 151 EVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSL 228 (640)
Q Consensus 151 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l 228 (640)
+.+++++|.++ .+|..+. ..+++|+|++|+|++.++. |..+++|++|+|++|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i--------------------- 69 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKI--------------------- 69 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCC---------------------
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcC---------------------
Confidence 57888888887 5777664 4567888888888887553 67777777777766655
Q ss_pred cccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCc
Q 006570 229 RSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCI 308 (640)
Q Consensus 229 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~ 308 (640)
++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|
T Consensus 70 ~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 149 (220)
T 2v70_A 70 TDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF 149 (220)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTT
T ss_pred CEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHh
Confidence 45566789999999999999999999888889999999999999999999889999999999999999999999999999
Q ss_pred cCCCCCceeeeccccccCc
Q 006570 309 GSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 309 ~~~~~l~~l~l~~N~l~~~ 327 (640)
..+++|+.+++++|.+++.
T Consensus 150 ~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 150 DTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TTCTTCCEEECCSCCEECS
T ss_pred cCCCCCCEEEecCcCCcCC
Confidence 9999999999999998864
No 362
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=2.2e-19 Score=175.86 Aligned_cols=153 Identities=21% Similarity=0.176 Sum_probs=125.9
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGN 205 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N 205 (640)
+.++.+++++ +.+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|+..++. |..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l-~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRH-ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCc-CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 4577777777 56776554 7899999999999988888888899999999999998877766 678888888877777
Q ss_pred CCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCcccc
Q 006570 206 DFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNIS 285 (640)
Q Consensus 206 ~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 285 (640)
+|+ +..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+.
T Consensus 99 ~l~---------------------~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 156 (229)
T 3e6j_A 99 QLT---------------------VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFD 156 (229)
T ss_dssp CCC---------------------CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTT
T ss_pred cCC---------------------ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHh
Confidence 664 344556788899999999999998 6788889999999999999999887777788
Q ss_pred CCCCCCEEeccCccCcccC
Q 006570 286 CSAKLNFVEISHNLLIGKL 304 (640)
Q Consensus 286 ~~~~L~~L~ls~N~l~~~~ 304 (640)
.+++|+.|++++|.+....
T Consensus 157 ~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 157 RLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TCTTCCEEECTTSCBCTTB
T ss_pred CCCCCCEEEeeCCCccCCc
Confidence 8999999999999887644
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=4.7e-20 Score=193.61 Aligned_cols=173 Identities=18% Similarity=0.119 Sum_probs=150.3
Q ss_pred CEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-cc-CcCcCCeeEccCCCCCCCCCCc---ccccceeeccc
Q 006570 151 EVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQ-RLVLLEELNLGGNDFGPKFPSL---SKNIVSVILRN 225 (640)
Q Consensus 151 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~-~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~l~~ 225 (640)
+.+++++|.++ .+|..+. +.++.|+|++|+|++.++. +. ++++|++|+|++|+|++..+.. +++|+.|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57888888888 6787664 4699999999999999887 66 9999999999999999877654 68999999999
Q ss_pred CcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccc---cCCCCCCEEeccCccCcc
Q 006570 226 NSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNI---SCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 226 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~---~~~~~L~~L~ls~N~l~~ 302 (640)
|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|||++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998888889999999999999999999889999999999999999999988555555 579999999999999997
Q ss_pred cCCCCccCCCC--CceeeeccccccC
Q 006570 303 KLPSCIGSNSL--NRTVVSTWNCLSG 326 (640)
Q Consensus 303 ~~p~~~~~~~~--l~~l~l~~N~l~~ 326 (640)
..+..+..++. ++.+++++|.+..
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCHHHhhhccHhhcceEEecCCCccC
Confidence 66667777776 4789999998764
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=2.6e-22 Score=222.31 Aligned_cols=180 Identities=17% Similarity=0.165 Sum_probs=101.4
Q ss_pred cCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCc-------------ccccCCccccCCCCCCEEE-ccCccCCc
Q 006570 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNF-------------IYGEIPMEITSLKNLKSIV-LADNLLNG 186 (640)
Q Consensus 121 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 186 (640)
..+++|+.|+|++|.+. .+|..+++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 45666666666666663 566666666666666665554 4455666666666666666 45554321
Q ss_pred cCC------CccC--cCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcC
Q 006570 187 SVP------DLQR--LVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPI 256 (640)
Q Consensus 187 ~~~------~~~~--l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 256 (640)
... .+.. ...|+.|+|++|+|++. |.. +++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +
T Consensus 425 L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~l-p~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-l 501 (567)
T 1dce_A 425 LRSKFLLENSVLKMEYADVRVLHLAHKDLTVL-CHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-V 501 (567)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECTTSCCSSC-CCGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-C
T ss_pred hhhhhhhcccccccCccCceEEEecCCCCCCC-cCccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-C
Confidence 110 0000 01355566666655542 322 345555555555555 555566666666666666666664 4
Q ss_pred CccccCCCCCcEEEccCCcCCccC-CccccCCCCCCEEeccCccCcccCC
Q 006570 257 QSFLFSLPSILYLNLAGNQLSEAL-PVNISCSAKLNFVEISHNLLIGKLP 305 (640)
Q Consensus 257 p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~~~~L~~L~ls~N~l~~~~p 305 (640)
| .++.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|+|++.+|
T Consensus 502 p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 502 D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 4 5566666666666666666544 5666666666666666666665444
No 365
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.80 E-value=4.8e-20 Score=184.51 Aligned_cols=167 Identities=23% Similarity=0.283 Sum_probs=144.0
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEc
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVL 179 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 179 (640)
..+..+++++|.+.+.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|.|++..| +.++++|+.|+|
T Consensus 19 ~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 45667788888876543 5889999999999999995 566 69999999999999999995444 999999999999
Q ss_pred cCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC
Q 006570 180 ADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ 257 (640)
Q Consensus 180 ~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 257 (640)
++|++++.++ +.. ++|++|+|++|++++. +.. +++|+.|+|++|++++. | .+..+++|+.|+|++|++++.
T Consensus 93 ~~N~l~~l~~-~~~-~~L~~L~L~~N~l~~~-~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 93 NRNRLKNLNG-IPS-ACLSRLFLDNNELRDT-DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp CSSCCSCCTT-CCC-SSCCEEECCSSCCSBS-GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--
T ss_pred CCCccCCcCc-ccc-CcccEEEccCCccCCC-hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--
Confidence 9999998654 333 9999999999999875 333 78999999999999864 4 689999999999999999976
Q ss_pred ccccCCCCCcEEEccCCcCCcc
Q 006570 258 SFLFSLPSILYLNLAGNQLSEA 279 (640)
Q Consensus 258 ~~~~~l~~L~~L~l~~N~l~~~ 279 (640)
..+..+++|+.|++++|++++.
T Consensus 166 ~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSTTCCCCCEEEEEEEEEECC
T ss_pred HHhccCCCCCEEeCCCCcccCC
Confidence 6789999999999999999874
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=1.2e-22 Score=225.11 Aligned_cols=179 Identities=15% Similarity=0.090 Sum_probs=156.2
Q ss_pred cCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCcc-------------CCccCCC-ccCcCcCCeeE-ccCCCCCC
Q 006570 145 NRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNL-------------LNGSVPD-LQRLVLLEELN-LGGNDFGP 209 (640)
Q Consensus 145 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~~~-~~~l~~L~~L~-L~~N~l~~ 209 (640)
..+++|+.|+|++|+|+ .+|.++++|++|+.|++++|. +.+.+|. +..+++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 67899999999999998 899999999999999998886 5666665 78889999998 66665421
Q ss_pred CCC---------Cc-ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCcc
Q 006570 210 KFP---------SL-SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279 (640)
Q Consensus 210 ~~~---------~~-~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 279 (640)
... .. ...|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++
T Consensus 425 L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~- 500 (567)
T 1dce_A 425 LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN- 500 (567)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-
T ss_pred hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-
Confidence 100 00 2368899999999996 676 999999999999999999 789999999999999999999998
Q ss_pred CCccccCCCCCCEEeccCccCcccC-CCCccCCCCCceeeeccccccCccC
Q 006570 280 LPVNISCSAKLNFVEISHNLLIGKL-PSCIGSNSLNRTVVSTWNCLSGVNT 329 (640)
Q Consensus 280 ~p~~~~~~~~L~~L~ls~N~l~~~~-p~~~~~~~~l~~l~l~~N~l~~~~~ 329 (640)
+| .++.+++|+.|+|++|+|++.. |..++.+++|+.|++++|.+++.++
T Consensus 501 lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 501 VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 67 8999999999999999999887 9999999999999999999998764
No 367
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=1.2e-19 Score=180.95 Aligned_cols=139 Identities=14% Similarity=0.123 Sum_probs=107.4
Q ss_pred CCCCCccccCCccceEEEEe-CCCcE--EEEEEeecccCCC------------------------hHHHHHHHHHHhcCC
Q 006570 453 FDPTNLIGEGSQGQLYKGFL-TDGSR--VSVKCLKLKQRHL------------------------PQSLMQHVELLSKLR 505 (640)
Q Consensus 453 ~~~~~~ig~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~------------------------~~~~~~E~~~l~~l~ 505 (640)
|...+.||+|+||.||+|+. .+|+. ||||+++...... ...+.+|++.|.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999997 67888 9999875431110 136789999999998
Q ss_pred Cccc--ceeeeEEEecccCCCCCCCeEEEEEEccCC-C----CHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcc-cC
Q 006570 506 HRHL--VSILGHCILTYQDHPNTGSTVFLVLEHISN-G----SLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLH-TG 577 (640)
Q Consensus 506 h~ni--v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~-G----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~ 577 (640)
|+++ ..++++ ...++||||+.+ | +|.++... .++.....++.|++.||.||| +
T Consensus 129 ~~~i~~p~~~~~------------~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~- 189 (258)
T 1zth_A 129 EAGVSVPQPYTY------------MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQE- 189 (258)
T ss_dssp HTTCCCCCEEEE------------ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHT-
T ss_pred hCCCCCCeEEEc------------CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHH-
Confidence 8864 333321 125899999942 4 67766532 234567889999999999999 7
Q ss_pred CCCCeeccCCCCCceeecCCCceEEeCCCCCccccCC
Q 006570 578 VAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSKVR 614 (640)
Q Consensus 578 ~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~~~ 614 (640)
.+|+||||||+|||+++ .++|+|||+|......
T Consensus 190 --~givHrDlkp~NILl~~--~~~liDFG~a~~~~~~ 222 (258)
T 1zth_A 190 --AELVHADLSEYNIMYID--KVYFIDMGQAVTLRHP 222 (258)
T ss_dssp --SCEECSSCSTTSEEESS--SEEECCCTTCEETTST
T ss_pred --CCEEeCCCCHHHEEEcC--cEEEEECcccccCCCc
Confidence 79999999999999998 9999999999876544
No 368
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=3.9e-19 Score=169.82 Aligned_cols=153 Identities=18% Similarity=0.219 Sum_probs=77.2
Q ss_pred cCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCC-CccCcCcCCe
Q 006570 121 TKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVP-DLQRLVLLEE 199 (640)
Q Consensus 121 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~ 199 (640)
..+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|++++..+ .+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34445555555555553 344 3555555555555555443 12244455555555555555544322 2444444444
Q ss_pred eEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCcc
Q 006570 200 LNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEA 279 (640)
Q Consensus 200 L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 279 (640)
|+|++|+ +++..|..+..+++|+.|+|++|++.+.+| .+..+++|++|++++|++++
T Consensus 117 L~Ls~n~---------------------i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~- 173 (197)
T 4ezg_A 117 LDISHSA---------------------HDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD- 173 (197)
T ss_dssp EECCSSB---------------------CBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-
T ss_pred EEecCCc---------------------cCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-
Confidence 4444433 333445555566666666666665222344 45666666666666666654
Q ss_pred CCccccCCCCCCEEeccCccCc
Q 006570 280 LPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 280 ~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
++ .+..+++|+.|++++|++.
T Consensus 174 ~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 174 YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CT-TGGGCSSCCEEEECBC---
T ss_pred hH-HhccCCCCCEEEeeCcccC
Confidence 33 4555666666666666554
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1e-18 Score=166.92 Aligned_cols=157 Identities=17% Similarity=0.208 Sum_probs=125.8
Q ss_pred cccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCcccccceee
Q 006570 143 KINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVI 222 (640)
Q Consensus 143 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ 222 (640)
....+++|++|++++|.++ .+| .+..+++|++|++++|.++.. +.+..+++|++|++++|++
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~-~~l~~l~~L~~L~l~~n~l--------------- 100 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY-NPISGLSNLERLRIMGKDV--------------- 100 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC-GGGTTCTTCCEEEEECTTC---------------
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc-hhhhcCCCCCEEEeECCcc---------------
Confidence 3466778888888888888 666 678888888888888866543 3566666666666666554
Q ss_pred cccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCc-CCccCCccccCCCCCCEEeccCccCc
Q 006570 223 LRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQ-LSEALPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 223 l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
++..|..+..+++|++|+|++|++++..|..+..+++|++|+|++|+ ++ .+| .+..+++|+.|++++|+++
T Consensus 101 ------~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 101 ------TSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp ------BGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCC
T ss_pred ------CcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCc
Confidence 55567788999999999999999998889999999999999999998 65 466 6889999999999999998
Q ss_pred ccCCCCccCCCCCceeeeccccccCc
Q 006570 302 GKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 302 ~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+ ++ .+..+++|+.|++++|++.+.
T Consensus 173 ~-~~-~l~~l~~L~~L~l~~N~i~~~ 196 (197)
T 4ezg_A 173 D-YR-GIEDFPKLNQLYAFSQTIGGK 196 (197)
T ss_dssp C-CT-TGGGCSSCCEEEECBC-----
T ss_pred C-hH-HhccCCCCCEEEeeCcccCCc
Confidence 6 44 788999999999999998753
No 370
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=9.7e-18 Score=159.37 Aligned_cols=128 Identities=23% Similarity=0.262 Sum_probs=56.6
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCc-cccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPM-EITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGG 204 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~ 204 (640)
+.+++++|++ +.+|..+.. +|++|+|++|.|++..|. .|.++++|++|+|++|+|++.+|. |.++++|++|+|++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 3455555555 334443322 444444444444433332 244444444444444444444332 33333333333333
Q ss_pred CCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCc
Q 006570 205 NDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSE 278 (640)
Q Consensus 205 N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 278 (640)
|+| ++..|..|.++++|++|+|++|+|++.+|..|..+++|++|+|++|.+++
T Consensus 88 N~l---------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKI---------------------KEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCC---------------------CEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcC---------------------CccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 332 23333344445555555555555554445445555555555555555443
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=1.8e-17 Score=157.45 Aligned_cols=126 Identities=18% Similarity=0.244 Sum_probs=61.2
Q ss_pred CEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCC----cccccceeecccCcccccCCccccCCCCccEEEccCC
Q 006570 175 KSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSN 250 (640)
Q Consensus 175 ~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 250 (640)
+.+++++|.++.++..+.. +|++|+|++|++++..+. .+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 5566666666554443322 555666665555544432 1344444444444444444444444444444444444
Q ss_pred cccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcc
Q 006570 251 NFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 251 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
+|++..|..|.++++|++|+|++|+|++..|..+..+++|+.|++++|.+++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 4444444444444444444444444444444444444444444444444443
No 372
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=1.5e-18 Score=198.18 Aligned_cols=188 Identities=19% Similarity=0.122 Sum_probs=83.7
Q ss_pred ccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCC
Q 006570 106 SLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLN 185 (640)
Q Consensus 106 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 185 (640)
+++.|.+. ..+..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 33444432 34555666666666666666664 55655566666666666666666 66666666666666666666666
Q ss_pred ccCCCccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCC-ccEEEccCCcccCcCCccccC
Q 006570 186 GSVPDLQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQ-LKQFDISSNNFVGPIQSFLFS 262 (640)
Q Consensus 186 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~ 262 (640)
.+++.|.+|++|++|+|++|.|+.....+ +++|+.|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|..
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~--- 360 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE--- 360 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---
T ss_pred ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc---
Confidence 44444666666666666666665322222 456666666666666666665544321 223566666666666543
Q ss_pred CCCCcEEEccCC--------cCCccCCccccCCCCCCEEeccCccCcc
Q 006570 263 LPSILYLNLAGN--------QLSEALPVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 263 l~~L~~L~l~~N--------~l~~~~p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
|..|+++.| .+.+..+..+..+..+....+++|.+.+
T Consensus 361 ---l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 361 ---RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp --------------------------------------------CCCG
T ss_pred ---cceeEeecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 334444444 3334444445556666667777776653
No 373
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=2.8e-17 Score=152.55 Aligned_cols=135 Identities=23% Similarity=0.271 Sum_probs=77.9
Q ss_pred CCCCCcEeecccCcCc-CCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCe
Q 006570 122 KLSNLKVLSLVSLGLW-GPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEE 199 (640)
Q Consensus 122 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~ 199 (640)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|. +.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3456666666666665 45666666666666666666666643 4555666666666666666654444 334555555
Q ss_pred eEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC---ccccCCCCCcEEEccCCcC
Q 006570 200 LNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ---SFLFSLPSILYLNLAGNQL 276 (640)
Q Consensus 200 L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~~N~l 276 (640)
|+|++|++++.. .+..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+
T Consensus 100 L~Ls~N~l~~~~--------------------~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 100 LNLSGNKLKDIS--------------------TLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp EECBSSSCCSSG--------------------GGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred EeccCCccCcch--------------------hHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 555555443210 11455566666666666666665444 3566666666666666666
Q ss_pred Cc
Q 006570 277 SE 278 (640)
Q Consensus 277 ~~ 278 (640)
..
T Consensus 160 ~~ 161 (168)
T 2ell_A 160 QE 161 (168)
T ss_dssp CB
T ss_pred hh
Confidence 43
No 374
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=4.6e-17 Score=151.07 Aligned_cols=134 Identities=24% Similarity=0.246 Sum_probs=113.0
Q ss_pred ccccccccCccCCC-ChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 006570 100 FSASQQSLSANFNI-DRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 100 ~~l~~l~l~~n~~~-~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 178 (640)
..++.|+|++|.+. +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 68999999999987 68888899999999999999999765 7899999999999999999988898888899999999
Q ss_pred ccCccCCccC--CCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCccc
Q 006570 179 LADNLLNGSV--PDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV 253 (640)
Q Consensus 179 L~~N~l~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 253 (640)
|++|.|++.+ +.+..+++|++|++++|.+++..+. ....+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~------------------~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDY------------------RESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTH------------------HHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHH------------------HHHHHHhCccCcEecCCCCChh
Confidence 9999999975 4588899999988888877433220 0025667777888888888776
No 375
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=2e-16 Score=150.29 Aligned_cols=128 Identities=16% Similarity=0.162 Sum_probs=96.7
Q ss_pred CeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCC
Q 006570 198 EELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277 (640)
Q Consensus 198 ~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 277 (640)
+++++++|+++..+....++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~ 91 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91 (193)
T ss_dssp TEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccC
Confidence 34555555555433334456666666677776 56777888888888888888888777777888888888888888888
Q ss_pred ccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 278 EALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 278 ~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
+..|..|..+++|+.|+|++|+|++..+..|..+++|+.+++++|.+..
T Consensus 92 ~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 92 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp BCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred EeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 8777788888888888888888887666678888888888888887764
No 376
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=2.8e-16 Score=147.11 Aligned_cols=130 Identities=14% Similarity=0.089 Sum_probs=79.3
Q ss_pred CeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCC
Q 006570 198 EELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277 (640)
Q Consensus 198 ~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 277 (640)
+.+++++|+++.......++|+.|++++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+
T Consensus 10 ~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 89 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ 89 (177)
T ss_dssp TEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCcc
Confidence 34444444444433333445555555555555544555666666777777777666555555666667777777777776
Q ss_pred ccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 278 EALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 278 ~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+..+..+..+++|+.|++++|++++..+..+..+++|+.+++++|.+++.
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 90 SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 65555566666777777777776655555556666677777777766654
No 377
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=4.7e-17 Score=147.80 Aligned_cols=128 Identities=25% Similarity=0.293 Sum_probs=68.4
Q ss_pred CCCCcEeecccCcCc-CCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCee
Q 006570 123 LSNLKVLSLVSLGLW-GPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEEL 200 (640)
Q Consensus 123 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L 200 (640)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+.++++|++|+|++|.+++.+|. +..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 355666666666665 45665556666666666666666543 4455555555555555555554333 3334455554
Q ss_pred EccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC---ccccCCCCCcEEEcc
Q 006570 201 NLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ---SFLFSLPSILYLNLA 272 (640)
Q Consensus 201 ~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~ 272 (640)
++++|++++. ..|..+..+++|++|++++|++++..+ ..+..+++|++|+++
T Consensus 94 ~ls~N~i~~~--------------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDL--------------------STIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSH--------------------HHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCCh--------------------HHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 4444444220 112445555556666666666654443 345555555555554
No 378
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=2.8e-16 Score=149.36 Aligned_cols=127 Identities=24% Similarity=0.258 Sum_probs=65.3
Q ss_pred cEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCC
Q 006570 127 KVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGND 206 (640)
Q Consensus 127 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~ 206 (640)
+++++++|+++ .+|..+. ++|++|+|++|.|+ .+|..|.++++|+.|+|++|+|++.++.
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~---------------- 72 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQ---------------- 72 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTT----------------
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHh----------------
Confidence 35566666653 4554432 35566666666655 5555555555555555555555544443
Q ss_pred CCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccC
Q 006570 207 FGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISC 286 (640)
Q Consensus 207 l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 286 (640)
.|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..
T Consensus 73 ----------------------------~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 124 (193)
T 2wfh_A 73 ----------------------------SFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFND 124 (193)
T ss_dssp ----------------------------TTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTT
T ss_pred ----------------------------HccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhc
Confidence 3444444444444444444444444445555555555555554433334555
Q ss_pred CCCCCEEeccCccCc
Q 006570 287 SAKLNFVEISHNLLI 301 (640)
Q Consensus 287 ~~~L~~L~ls~N~l~ 301 (640)
+++|+.|++++|.+.
T Consensus 125 l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 125 LSALSHLAIGANPLY 139 (193)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred CccccEEEeCCCCee
Confidence 555555555555554
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=1.4e-16 Score=164.92 Aligned_cols=169 Identities=15% Similarity=0.089 Sum_probs=103.8
Q ss_pred CCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCC-------CCCC-------
Q 006570 147 FWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDF-------GPKF------- 211 (640)
Q Consensus 147 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l-------~~~~------- 211 (640)
+++|+.|+|++ .++..-+.+|.+|++|+.|++++|.++.+.+. |.++.++..+.++.+.. ....
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 77777777777 66644455677777777777777777666555 66666666655544211 0000
Q ss_pred ----------------------C---------------------CcccccceeecccCcccccCCccccCCCCccEEEcc
Q 006570 212 ----------------------P---------------------SLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDIS 248 (640)
Q Consensus 212 ----------------------~---------------------~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 248 (640)
+ ..+++|+.|+|++|+++...+..|.++.+|+.|+|+
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 0 013466666666666665555566666666666666
Q ss_pred CCcccCcCCccccCCCCCc-EEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceee
Q 006570 249 SNNFVGPIQSFLFSLPSIL-YLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVV 318 (640)
Q Consensus 249 ~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~ 318 (640)
+| ++...+..|.++++|+ .+++.+ +++.+.+..|.++++|+.+++++|+++...+.+|.++++|+.++
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 66 5555556666666666 666666 55555556666666666666666666655556666666666654
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=4.9e-16 Score=145.47 Aligned_cols=70 Identities=14% Similarity=0.057 Sum_probs=38.6
Q ss_pred cccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccC
Q 006570 235 GLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKL 304 (640)
Q Consensus 235 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~ 304 (640)
.|.++++|+.|+|++|+|++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|.+.+..
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 3445555555555555555544444555555566666666555544444455566666666666655433
No 381
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.64 E-value=4.1e-18 Score=190.85 Aligned_cols=227 Identities=15% Similarity=0.066 Sum_probs=140.2
Q ss_pred ccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCC-ccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 006570 100 FSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLP-SKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 100 ~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 178 (640)
..|+.++++++ ....+|..+..+++|++|+|++|.+++... ..+..+++|++|+|++|...+.++..+..+++|++|+
T Consensus 270 ~~L~~L~l~~~-~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~ 348 (592)
T 3ogk_B 270 RKLCRLGLSYM-GPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLR 348 (592)
T ss_dssp TTCCEEEETTC-CTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEE
T ss_pred ccccccCcccc-chhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEE
Confidence 34455555543 234456666677777777777777644332 3356677777777773333333444445667777777
Q ss_pred cc-----------CccCCcc-CCC-ccCcCcCCeeEccCCCCCCCCCCc----ccccceeecc----cCccccc-----C
Q 006570 179 LA-----------DNLLNGS-VPD-LQRLVLLEELNLGGNDFGPKFPSL----SKNIVSVILR----NNSLRSE-----I 232 (640)
Q Consensus 179 L~-----------~N~l~~~-~~~-~~~l~~L~~L~L~~N~l~~~~~~~----~~~L~~L~l~----~N~l~~~-----~ 232 (640)
|+ .|.+++. ++. +..+++|++|+++.|++++..+.. +++|+.|+++ .|.+++. +
T Consensus 349 L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~ 428 (592)
T 3ogk_B 349 IERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGV 428 (592)
T ss_dssp EECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHH
T ss_pred eecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHH
Confidence 77 3555543 222 345677777777777776543322 5667777775 5666642 3
Q ss_pred CccccCCCCccEEEccCC--cccCcCCcccc-CCCCCcEEEccCCcCCc-cCCccccCCCCCCEEeccCccCccc-CCCC
Q 006570 233 PSGLKNFDQLKQFDISSN--NFVGPIQSFLF-SLPSILYLNLAGNQLSE-ALPVNISCSAKLNFVEISHNLLIGK-LPSC 307 (640)
Q Consensus 233 p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~l~~N~l~~-~~p~~~~~~~~L~~L~ls~N~l~~~-~p~~ 307 (640)
+..+.++++|+.|+|++| .+++..+..+. .+++|++|+|++|++++ .++..+..+++|+.|++++|.+++. ++..
T Consensus 429 ~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 508 (592)
T 3ogk_B 429 RSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAA 508 (592)
T ss_dssp HHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHH
T ss_pred HHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHH
Confidence 333556777888888643 35554444443 37778888888888765 3444556778888888888887654 3344
Q ss_pred ccCCCCCceeeeccccccCc
Q 006570 308 IGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 308 ~~~~~~l~~l~l~~N~l~~~ 327 (640)
+..+++|+.|++++|+++..
T Consensus 509 ~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 509 VTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHCSSCCEEEEESCBCCTT
T ss_pred HHhcCccCeeECcCCcCCHH
Confidence 45677888888888877653
No 382
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.64 E-value=1.9e-18 Score=165.18 Aligned_cols=134 Identities=19% Similarity=0.247 Sum_probs=85.4
Q ss_pred hhcCCCCCcEeecccCcCcCCCCc------cccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCCcc
Q 006570 119 ILTKLSNLKVLSLVSLGLWGPLPS------KINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPDLQ 192 (640)
Q Consensus 119 ~l~~l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 192 (640)
.+.....++.++++.|.++|.+|. .+..+++|++|+|++|.+++ +| .+.++++|++|+|++|.++..++.+.
T Consensus 13 ~~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~ 90 (198)
T 1ds9_A 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDA 90 (198)
T ss_dssp HHHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHH
T ss_pred HHHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhh
Confidence 356667788888888888888776 78888888888888888875 66 77788888888888888875544466
Q ss_pred CcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCC-ccccCCCCccEEEccCCcccCc
Q 006570 193 RLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIP-SGLKNFDQLKQFDISSNNFVGP 255 (640)
Q Consensus 193 ~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 255 (640)
.+++|++|+|++|++++. |.. +++|+.|++++|++++..+ ..+..+++|++|++++|.+++.
T Consensus 91 ~~~~L~~L~L~~N~l~~l-~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 91 VADTLEELWISYNQIASL-SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHHHCSEEEEEEEECCCH-HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred cCCcCCEEECcCCcCCcC-CccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 667777777777776542 211 3344444444444442111 2344444444444444444433
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=2e-16 Score=143.65 Aligned_cols=129 Identities=19% Similarity=0.197 Sum_probs=108.3
Q ss_pred ccccccccCccCCC-ChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 006570 100 FSASQQSLSANFNI-DRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 100 ~~l~~l~l~~n~~~-~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 178 (640)
..++.|++++|.+. +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 68999999999998 78888899999999999999999776 6799999999999999999987998888899999999
Q ss_pred ccCccCCccC--CCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEcc
Q 006570 179 LADNLLNGSV--PDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDIS 248 (640)
Q Consensus 179 L~~N~l~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 248 (640)
+++|.+++.+ +.+..+++|++|++++|++++..+. .+..+..+++|+.||++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~------------------~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDY------------------RENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTH------------------HHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHH------------------HHHHHHHCCCcccccCC
Confidence 9999999864 5588999999998888877543220 00245666677777665
No 384
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=1.1e-16 Score=165.99 Aligned_cols=142 Identities=13% Similarity=0.133 Sum_probs=100.5
Q ss_pred cCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccC--------------CChHHH--------HHHHHHHhcCCCcc
Q 006570 451 NNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQR--------------HLPQSL--------MQHVELLSKLRHRH 508 (640)
Q Consensus 451 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~~--------~~E~~~l~~l~h~n 508 (640)
.-|.+...||+|+||.||+|...+|+.||||+++.... ...... .+|...|.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34888999999999999999988899999999764210 011122 23555555554333
Q ss_pred cceeeeEEEecccCCCCCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCC
Q 006570 509 LVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLK 588 (640)
Q Consensus 509 iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk 588 (640)
+....-+.. ...+|||||+++++|.++... .....++.|++.+|.|||+ .+|||||||
T Consensus 175 v~vp~p~~~----------~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~---~gIVHrDLK 232 (397)
T 4gyi_A 175 FPVPEPIAQ----------SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAK---HGLIHGDFN 232 (397)
T ss_dssp CSCCCEEEE----------ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCS
T ss_pred CCCCeeeec----------cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHH---CCCcCCCCC
Confidence 221111111 113799999999888765421 1245688999999999998 699999999
Q ss_pred CCceeecCCC----------ceEEeCCCCCccccCC
Q 006570 589 TENILLDKAL----------TAKLSGYNIPLPSKVR 614 (640)
Q Consensus 589 ~~NILl~~~~----------~~kl~DfGla~~~~~~ 614 (640)
|.|||+++++ .+.|+||+-+.....+
T Consensus 233 p~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~hp 268 (397)
T 4gyi_A 233 EFNILIREEKDAEDPSSITLTPIIIXFPQMVSMDHP 268 (397)
T ss_dssp TTSEEEEEEECSSCTTSEEEEEEECCCTTCEETTST
T ss_pred HHHEEEeCCCCcccccccccceEEEEeCCcccCCCC
Confidence 9999998876 3899999988765433
No 385
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.62 E-value=1.2e-17 Score=186.92 Aligned_cols=112 Identities=10% Similarity=0.083 Sum_probs=66.0
Q ss_pred ccccceeecccCcccccCCccccC-CCCccEEEcc----CCcccCc-----CCccccCCCCCcEEEccCC--cCCccCCc
Q 006570 215 SKNIVSVILRNNSLRSEIPSGLKN-FDQLKQFDIS----SNNFVGP-----IQSFLFSLPSILYLNLAGN--QLSEALPV 282 (640)
Q Consensus 215 ~~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~l~~N--~l~~~~p~ 282 (640)
+++|++|+++.|++++..+..++. +++|+.|+|+ .|++++. ++..+.++++|++|+|+++ .+++..+.
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHH
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHH
Confidence 456666666666666555555544 6666666664 5556543 2333455666777776532 24443333
Q ss_pred ccc-CCCCCCEEeccCccCcc-cCCCCccCCCCCceeeeccccccC
Q 006570 283 NIS-CSAKLNFVEISHNLLIG-KLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 283 ~~~-~~~~L~~L~ls~N~l~~-~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
.+. .+++|+.|++++|++++ .++..+..+++|+.|++++|.+++
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH
Confidence 332 36677777777777765 334445666777777777777653
No 386
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.62 E-value=6e-16 Score=144.72 Aligned_cols=131 Identities=19% Similarity=0.229 Sum_probs=74.7
Q ss_pred hcCCCCCcEeecccCcCcCCCCccccCCC-CCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcC
Q 006570 120 LTKLSNLKVLSLVSLGLWGPLPSKINRFW-SLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLL 197 (640)
Q Consensus 120 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L 197 (640)
+.++++|+.|+|++|.++ .+|. +..+. +|++|+|++|.|++. +.|..+++|++|+|++|+|++.++. +..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 455666667777766665 3443 33333 666666666666643 4566666666666666666665555 3555666
Q ss_pred CeeEccCCCCCCCCCCcccccceeecccCcccccCCc--cccCCCCccEEEccCCcccCcCCcc----ccCCCCCcEEEc
Q 006570 198 EELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPS--GLKNFDQLKQFDISSNNFVGPIQSF----LFSLPSILYLNL 271 (640)
Q Consensus 198 ~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~l 271 (640)
++|+|++|+++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.||+
T Consensus 91 ~~L~L~~N~i~----------------------~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 91 TELILTNNSLV----------------------ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp CEEECCSCCCC----------------------CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred CEEECCCCcCC----------------------cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 66655555552 2222 4555566666666666665 23332 555556666666
Q ss_pred cCCcCC
Q 006570 272 AGNQLS 277 (640)
Q Consensus 272 ~~N~l~ 277 (640)
++|.+.
T Consensus 148 ~~n~~~ 153 (176)
T 1a9n_A 148 QKVKLK 153 (176)
T ss_dssp EECCHH
T ss_pred CcCCHH
Confidence 555543
No 387
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.61 E-value=5.1e-18 Score=162.15 Aligned_cols=135 Identities=22% Similarity=0.262 Sum_probs=95.2
Q ss_pred ccCCCCCCEEEcccCcccccCCc------cccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCc---
Q 006570 144 INRFWSLEVLNISSNFIYGEIPM------EITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSL--- 214 (640)
Q Consensus 144 ~~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--- 214 (640)
+.....++.++++.|.++|.+|. .+..+++|++|+|++|.+++. |.+.++++|++|+|++|+++. +|..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l-~~~~~l~~L~~L~l~~n~l~~-l~~~~~~ 91 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI-SSLSGMENLRILSLGRNLIKK-IENLDAV 91 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCC-CCHHHHTTCCEEEEEEEEECS-CSSHHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCccc-cccccCCCCCEEECCCCCccc-ccchhhc
Confidence 55667888899999999988887 899999999999999999985 488889999999999988863 3433
Q ss_pred ccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCC-ccccCCCCCcEEEccCCcCCccCCc
Q 006570 215 SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQ-SFLFSLPSILYLNLAGNQLSEALPV 282 (640)
Q Consensus 215 ~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~ 282 (640)
+++|+.|+|++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|++|++++|.+++.+|.
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 3566666666666654 33 45556666666666666654222 3455666666666666666554443
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=1.1e-15 Score=143.01 Aligned_cols=133 Identities=17% Similarity=0.136 Sum_probs=85.7
Q ss_pred cccCCCCCCEEEcccCcccccCCccccCCC-CCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCCCCccccccee
Q 006570 143 KINRFWSLEVLNISSNFIYGEIPMEITSLK-NLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSV 221 (640)
Q Consensus 143 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L 221 (640)
.+.++.+|++|+|++|.++ .+|. +..+. +|++|+|++|.|++. +.+..+++|++|+|++|++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l-------------- 76 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRI-------------- 76 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCC--------------
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcc--------------
Confidence 3566777777777777777 4443 33333 777777777777665 4566666666666655554
Q ss_pred ecccCcccccCCccccCCCCccEEEccCCcccCcCCc--cccCCCCCcEEEccCCcCCccCCcc----ccCCCCCCEEec
Q 006570 222 ILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQS--FLFSLPSILYLNLAGNQLSEALPVN----ISCSAKLNFVEI 295 (640)
Q Consensus 222 ~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~----~~~~~~L~~L~l 295 (640)
++..|..|..+++|+.|+|++|+|+ .+|. .+..+++|+.|++++|.++. +|.. +..+++|+.||+
T Consensus 77 -------~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 77 -------CRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp -------CEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETT
T ss_pred -------cccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCC
Confidence 3222333466777777888877775 3454 67777777777777777764 4543 666777777777
Q ss_pred cCccCc
Q 006570 296 SHNLLI 301 (640)
Q Consensus 296 s~N~l~ 301 (640)
++|.+.
T Consensus 148 ~~n~~~ 153 (176)
T 1a9n_A 148 QKVKLK 153 (176)
T ss_dssp EECCHH
T ss_pred CcCCHH
Confidence 777654
No 389
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.56 E-value=6.9e-15 Score=152.08 Aligned_cols=175 Identities=10% Similarity=0.061 Sum_probs=143.1
Q ss_pred hhhcC--------CCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccC----C
Q 006570 118 TILTK--------LSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLL----N 185 (640)
Q Consensus 118 ~~l~~--------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~ 185 (640)
.+|.+ +++|+.|+|.+ .++..-+.+|.++++|+.|+|++|.+....+..|.++.++..+.+..+.. .
T Consensus 87 ~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~ 165 (329)
T 3sb4_A 87 YAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKN 165 (329)
T ss_dssp TTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTST
T ss_pred HHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccc
Confidence 46777 99999999998 88766667899999999999999999867777788888888887766322 0
Q ss_pred ccCCC-c--------------------------------------------------cCcCcCCeeEccCCCCCCCCCCc
Q 006570 186 GSVPD-L--------------------------------------------------QRLVLLEELNLGGNDFGPKFPSL 214 (640)
Q Consensus 186 ~~~~~-~--------------------------------------------------~~l~~L~~L~L~~N~l~~~~~~~ 214 (640)
...+. | ..+++|+.|+|++|+++...+..
T Consensus 166 ~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~a 245 (329)
T 3sb4_A 166 RWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFT 245 (329)
T ss_dssp TTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTT
T ss_pred cccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhh
Confidence 00000 0 13789999999999987655544
Q ss_pred ---ccccceeecccCcccccCCccccCCCCcc-EEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCC
Q 006570 215 ---SKNIVSVILRNNSLRSEIPSGLKNFDQLK-QFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKL 290 (640)
Q Consensus 215 ---~~~L~~L~l~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L 290 (640)
+.+|+.|+|.+| ++...+.+|.++.+|+ .|++.+ +++...+..|.++++|+.|++++|+++...+..|.++++|
T Consensus 246 F~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L 323 (329)
T 3sb4_A 246 FAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPS 323 (329)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCC
T ss_pred hhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcch
Confidence 679999999998 8877788999999999 999998 7887778999999999999999999998888899999999
Q ss_pred CEEec
Q 006570 291 NFVEI 295 (640)
Q Consensus 291 ~~L~l 295 (640)
+.++.
T Consensus 324 ~~ly~ 328 (329)
T 3sb4_A 324 KLIYK 328 (329)
T ss_dssp CEEEC
T ss_pred hhhcc
Confidence 99864
No 390
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=1.4e-14 Score=134.61 Aligned_cols=107 Identities=15% Similarity=0.156 Sum_probs=77.2
Q ss_pred CCeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcC
Q 006570 197 LEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276 (640)
Q Consensus 197 L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 276 (640)
.+.+++++|+++.......++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp TTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 35566666666544333455666666677777766677788888888888888888877776777888888888888888
Q ss_pred CccCCccccCCCCCCEEeccCccCccc
Q 006570 277 SEALPVNISCSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 277 ~~~~p~~~~~~~~L~~L~ls~N~l~~~ 303 (640)
++..+..|..+++|+.|+|++|.++..
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 776666677788888888888877644
No 391
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.53 E-value=4e-14 Score=131.94 Aligned_cols=105 Identities=15% Similarity=0.133 Sum_probs=69.0
Q ss_pred CeeEccCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCC
Q 006570 198 EELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLS 277 (640)
Q Consensus 198 ~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 277 (640)
+.+++++|+++..++...++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~ 94 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK 94 (174)
T ss_dssp SEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccc
Confidence 45555555554333333455566666666666666667777777777777777777665556677777777777777777
Q ss_pred ccCCccccCCCCCCEEeccCccCcc
Q 006570 278 EALPVNISCSAKLNFVEISHNLLIG 302 (640)
Q Consensus 278 ~~~p~~~~~~~~L~~L~ls~N~l~~ 302 (640)
+..+..|..+++|+.|+|++|.+..
T Consensus 95 ~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 95 SIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred eeCHHHhccccCCCEEEeCCCCccc
Confidence 6555557777777777777777663
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=9.7e-14 Score=128.84 Aligned_cols=109 Identities=15% Similarity=0.083 Sum_probs=99.5
Q ss_pred ccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEecc
Q 006570 217 NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS 296 (640)
Q Consensus 217 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls 296 (640)
..+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 5678999999998 5777664 789999999999999999999999999999999999998878888999999999999
Q ss_pred CccCcccCCCCccCCCCCceeeeccccccCcc
Q 006570 297 HNLLIGKLPSCIGSNSLNRTVVSTWNCLSGVN 328 (640)
Q Consensus 297 ~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~~ 328 (640)
+|+|++..|..|..+++|+.|++++|.++...
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 99999888888999999999999999988653
No 393
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.48 E-value=8.5e-13 Score=139.73 Aligned_cols=218 Identities=11% Similarity=0.043 Sum_probs=169.3
Q ss_pred CccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEE
Q 006570 99 KFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIV 178 (640)
Q Consensus 99 ~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 178 (640)
...|+.+.|+.+ +...-..+|.++ +|+.++|.+ .+...-+..|.++++|+.++|++|+++ .+|.....+.+|+.+.
T Consensus 134 ~~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~ 209 (401)
T 4fdw_A 134 NSQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVL 209 (401)
T ss_dssp TCCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEE
T ss_pred cCCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEE
Confidence 347888888776 444555678774 699999985 666666678999999999999999998 4554433368999999
Q ss_pred ccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCCc--ccccceeecccCcccccCCccccCCCCccEEEccCCccc--
Q 006570 179 LADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPSL--SKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV-- 253 (640)
Q Consensus 179 L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-- 253 (640)
|..| ++.+... |.++++|+.++|..| ++...... -.+|+.+.+ .|.++..-+.+|.++++|+.+++.+|.+.
T Consensus 210 lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~ 286 (401)
T 4fdw_A 210 LPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDD 286 (401)
T ss_dssp CCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCC
T ss_pred eCCc-hheehhhHhhCCCCCCEEecCCC-ccCccccccccCCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCC
Confidence 9855 7766665 899999999999875 43222222 268889999 56677677889999999999999998875
Q ss_pred ---CcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccccccC
Q 006570 254 ---GPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 254 ---~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
...+..|.++++|+.++|. |.++..-...|.++.+|+.++|.+| ++..-+.+|.++ +|+.+++.+|.+..
T Consensus 287 ~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 287 PEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp TTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCB
T ss_pred cccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcc
Confidence 3556788999999999999 5587777788999999999999665 666667788888 99999999886554
No 394
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=2e-13 Score=127.26 Aligned_cols=108 Identities=13% Similarity=0.086 Sum_probs=97.7
Q ss_pred ccceeecccCcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEecc
Q 006570 217 NIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEIS 296 (640)
Q Consensus 217 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls 296 (640)
.-+.+++++|+++ .+|..+. ++|+.|+|++|+|++.+|..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 13 ~~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 13 DQTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp CSSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECC
Confidence 3468999999996 6787765 899999999999999999999999999999999999998777778999999999999
Q ss_pred CccCcccCCCCccCCCCCceeeeccccccCc
Q 006570 297 HNLLIGKLPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 297 ~N~l~~~~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
+|+|++..+..|..+++|+.|++++|.+...
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 9999987777799999999999999988864
No 395
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.46 E-value=1.3e-12 Score=138.30 Aligned_cols=237 Identities=11% Similarity=0.043 Sum_probs=181.2
Q ss_pred EEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcc
Q 006570 77 VTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNIS 156 (640)
Q Consensus 77 v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 156 (640)
++.+.+..+ + ..+....+. ...|+.+.|++ .+...-+.+|.+|++|+.++|++|+++..-...|. ..+|+.+.|.
T Consensus 137 L~~i~l~~~-i-~~I~~~aF~-~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 137 IAKVVLNEG-L-KSIGDMAFF-NSTVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CSEEECCTT-C-CEECTTTTT-TCCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred ccEEEeCCC-c-cEECHHhcC-CCCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 555555543 2 123333333 35788888886 44455567899999999999999999665556666 6999999999
Q ss_pred cCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCCCCCCCC---cccccceeecccCccc---
Q 006570 157 SNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFGPKFPS---LSKNIVSVILRNNSLR--- 229 (640)
Q Consensus 157 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~---~~~~L~~L~l~~N~l~--- 229 (640)
.| +...-...|.++++|+.++|..| ++.+... |.+ .+|+.++|. |.++..... .+++|+.+.+.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~ 287 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDP 287 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCc
Confidence 55 77566677999999999999976 5655555 777 799999995 445433333 3689999999998875
Q ss_pred --ccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCC
Q 006570 230 --SEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSC 307 (640)
Q Consensus 230 --~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~ 307 (640)
...+..|.+|++|+.++|. |.++......|.++++|+.++|..| ++..-+.+|.++ +|+.+++++|.+....+..
T Consensus 288 ~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~ 364 (401)
T 4fdw_A 288 EAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKV 364 (401)
T ss_dssp TCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSS
T ss_pred ccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCccccccc
Confidence 4667889999999999999 5587677888999999999999665 777777899999 9999999999988777777
Q ss_pred ccCCC-CCceeeecccccc
Q 006570 308 IGSNS-LNRTVVSTWNCLS 325 (640)
Q Consensus 308 ~~~~~-~l~~l~l~~N~l~ 325 (640)
|..++ .+..+++..+.+.
T Consensus 365 F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 365 WYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CCCSCTTCCEEEECGGGHH
T ss_pred ccCCCCCccEEEeCHHHHH
Confidence 77764 6777877665543
No 396
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.44 E-value=2e-15 Score=169.01 Aligned_cols=179 Identities=11% Similarity=0.031 Sum_probs=103.2
Q ss_pred CCCCCCEEEcccCcccccCCc-cccCCCCCCEEEccCccCCc-cCCC-ccCcCcCCeeEccC---------CCCCCCCC-
Q 006570 146 RFWSLEVLNISSNFIYGEIPM-EITSLKNLKSIVLADNLLNG-SVPD-LQRLVLLEELNLGG---------NDFGPKFP- 212 (640)
Q Consensus 146 ~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~-~~~~-~~~l~~L~~L~L~~---------N~l~~~~~- 212 (640)
.+++|++|+|++|.+++.... .+.++++|+.|++++| ++. .++. ...+++|++|+|++ |.+++...
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 445666666666665533222 2445666666666665 321 1122 22466677776632 33332111
Q ss_pred ---CcccccceeecccCcccccCCcccc-CCCCccEEEcc--C----CcccCcC-----CccccCCCCCcEEEccCCcCC
Q 006570 213 ---SLSKNIVSVILRNNSLRSEIPSGLK-NFDQLKQFDIS--S----NNFVGPI-----QSFLFSLPSILYLNLAGNQLS 277 (640)
Q Consensus 213 ---~~~~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~~-----p~~~~~l~~L~~L~l~~N~l~ 277 (640)
..+++|+.|.++.|.+++..+..+. .+++|+.|+|+ + |++++.. +..+..+++|+.|+|++ .++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 1146777777777777665555554 47778888887 3 4555221 12255667777888766 555
Q ss_pred ccCCccccC-CCCCCEEeccCccCcccCCCCc-cCCCCCceeeeccccccC
Q 006570 278 EALPVNISC-SAKLNFVEISHNLLIGKLPSCI-GSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 278 ~~~p~~~~~-~~~L~~L~ls~N~l~~~~p~~~-~~~~~l~~l~l~~N~l~~ 326 (640)
+..+..+.. +++|+.|++++|.+++..+..+ ..+++|+.|++++|.+++
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 544444444 6778888888888765544444 457778888888887743
No 397
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.42 E-value=2e-15 Score=169.04 Aligned_cols=208 Identities=13% Similarity=0.034 Sum_probs=152.4
Q ss_pred hhhhhcCCCCCcEeecccCcCcCCC-CccccCCCCCCEEEcccCcccc-cCCccccCCCCCCEEEccC---------ccC
Q 006570 116 FFTILTKLSNLKVLSLVSLGLWGPL-PSKINRFWSLEVLNISSNFIYG-EIPMEITSLKNLKSIVLAD---------NLL 184 (640)
Q Consensus 116 ~~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~---------N~l 184 (640)
++..+..+++|+.|+|++|.+++.. +..+..+++|++|+|++| +.. .++.....+++|+.|+|++ |.+
T Consensus 281 l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l 359 (594)
T 2p1m_B 281 LPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVAL 359 (594)
T ss_dssp GGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCC
T ss_pred HHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCC
Confidence 4445557899999999999976443 233678999999999998 442 2333344689999999943 555
Q ss_pred CccCC-Cc-cCcCcCCeeEccCCCCCCCCCC----cccccceeecc--c----Cccccc-----CCccccCCCCccEEEc
Q 006570 185 NGSVP-DL-QRLVLLEELNLGGNDFGPKFPS----LSKNIVSVILR--N----NSLRSE-----IPSGLKNFDQLKQFDI 247 (640)
Q Consensus 185 ~~~~~-~~-~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~l~--~----N~l~~~-----~p~~~~~l~~L~~L~L 247 (640)
++... .+ ..+++|++|+++.|++++..+. .+++|+.|+++ + |.++.. ++..+..+++|+.|+|
T Consensus 360 ~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L 439 (594)
T 2p1m_B 360 TEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSL 439 (594)
T ss_dssp CHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEEC
T ss_pred CHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEee
Confidence 54322 23 3588999999999998765433 26799999999 4 566521 2223667899999999
Q ss_pred cCCcccCcCCccccC-CCCCcEEEccCCcCCccCCccc-cCCCCCCEEeccCccCcccCCC-CccCCCCCceeeeccccc
Q 006570 248 SSNNFVGPIQSFLFS-LPSILYLNLAGNQLSEALPVNI-SCSAKLNFVEISHNLLIGKLPS-CIGSNSLNRTVVSTWNCL 324 (640)
Q Consensus 248 s~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~-~~~~~L~~L~ls~N~l~~~~p~-~~~~~~~l~~l~l~~N~l 324 (640)
++ ++++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|.+++..+. ....+++|+.|++++|.+
T Consensus 440 ~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 440 SG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp CS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred cC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 87 776655556665 8999999999999977555444 5689999999999999654443 345578999999999987
Q ss_pred c
Q 006570 325 S 325 (640)
Q Consensus 325 ~ 325 (640)
+
T Consensus 519 ~ 519 (594)
T 2p1m_B 519 S 519 (594)
T ss_dssp B
T ss_pred C
Confidence 4
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=2e-14 Score=150.81 Aligned_cols=87 Identities=18% Similarity=0.214 Sum_probs=48.2
Q ss_pred ccceeecccCcccc----cCCccccCCCCccEEEccCCcccCc----CCccccCCCCCcEEEccCCcCCcc----CCccc
Q 006570 217 NIVSVILRNNSLRS----EIPSGLKNFDQLKQFDISSNNFVGP----IQSFLFSLPSILYLNLAGNQLSEA----LPVNI 284 (640)
Q Consensus 217 ~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~ 284 (640)
+|+.|+|++|.|+. .++..+..+++|++|||++|.|+.. ++..+...++|+.|+|++|.|+.. ++..+
T Consensus 156 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L 235 (372)
T 3un9_A 156 QITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAA 235 (372)
T ss_dssp CCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHH
T ss_pred ccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHH
Confidence 34444444444432 2333445566677777777776532 234455566677777777776542 23334
Q ss_pred cCCCCCCEEeccCccCccc
Q 006570 285 SCSAKLNFVEISHNLLIGK 303 (640)
Q Consensus 285 ~~~~~L~~L~ls~N~l~~~ 303 (640)
...++|++|||++|.|+..
T Consensus 236 ~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 236 REHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHCSSCCEEECTTSSCCHH
T ss_pred HhCCCCCEEeccCCCCCHH
Confidence 4456667777777766543
No 399
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=3e-12 Score=133.18 Aligned_cols=92 Identities=23% Similarity=0.139 Sum_probs=80.5
Q ss_pred hhhhhcCCCCCcEeeccc-CcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccC
Q 006570 116 FFTILTKLSNLKVLSLVS-LGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQR 193 (640)
Q Consensus 116 ~~~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~ 193 (640)
+|. |..+++|+.|+|++ |.|++..|..|++|++|++|+|++|+|++..|..|.+|++|+.|+|++|+|+++++. |..
T Consensus 24 ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 102 (347)
T 2ifg_A 24 LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102 (347)
T ss_dssp TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS
T ss_pred cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHccc
Confidence 566 88889999999996 999887778899999999999999999988888899999999999999999998887 555
Q ss_pred cCcCCeeEccCCCCCC
Q 006570 194 LVLLEELNLGGNDFGP 209 (640)
Q Consensus 194 l~~L~~L~L~~N~l~~ 209 (640)
++ |++|+|++|.|.-
T Consensus 103 ~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 103 LS-LQELVLSGNPLHC 117 (347)
T ss_dssp CC-CCEEECCSSCCCC
T ss_pred CC-ceEEEeeCCCccC
Confidence 55 9999999998864
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=4.5e-12 Score=131.80 Aligned_cols=101 Identities=18% Similarity=0.177 Sum_probs=60.7
Q ss_pred eeEccCC-CCCCCCCCc--ccccceeeccc-CcccccCCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCC
Q 006570 199 ELNLGGN-DFGPKFPSL--SKNIVSVILRN-NSLRSEIPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGN 274 (640)
Q Consensus 199 ~L~L~~N-~l~~~~~~~--~~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 274 (640)
.+++++| +|+..++ . +++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++.+|..|.++++|++|+|++|
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 4566666 6654332 3 34566666664 6666655566666666666666666666666666666666666666666
Q ss_pred cCCccCCccccCCCCCCEEeccCccCc
Q 006570 275 QLSEALPVNISCSAKLNFVEISHNLLI 301 (640)
Q Consensus 275 ~l~~~~p~~~~~~~~L~~L~ls~N~l~ 301 (640)
+|++..+..|..++ |+.|+|++|.|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 66654444444443 666666666665
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.26 E-value=1.2e-13 Score=144.94 Aligned_cols=159 Identities=19% Similarity=0.151 Sum_probs=105.1
Q ss_pred CCCCEEEcccCcccccCCccccC-----CCCCCEEEccCccCCccCCC--ccCcCcCCeeEccCCCCCCCCCCcccccce
Q 006570 148 WSLEVLNISSNFIYGEIPMEITS-----LKNLKSIVLADNLLNGSVPD--LQRLVLLEELNLGGNDFGPKFPSLSKNIVS 220 (640)
Q Consensus 148 ~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~ 220 (640)
+.|++|+|++|.|+......+.. .++|+.|+|++|.|+..... ...+.+|++|+|
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~L------------------ 133 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGL------------------ 133 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEEC------------------
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhc------------------
Confidence 45677777777776433333222 24666666666665432211 122344455555
Q ss_pred eecccCcccccCCccc-----cCCCCccEEEccCCcccCc----CCccccCCCCCcEEEccCCcCCcc----CCccccCC
Q 006570 221 VILRNNSLRSEIPSGL-----KNFDQLKQFDISSNNFVGP----IQSFLFSLPSILYLNLAGNQLSEA----LPVNISCS 287 (640)
Q Consensus 221 L~l~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~~ 287 (640)
++|.++......+ ...++|+.|+|++|.|+.. ++..+..+++|++|+|++|+|+.. ++..+...
T Consensus 134 ---s~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 134 ---QLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp ---CSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred ---CCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 4454443222222 2467899999999999752 445557889999999999999752 35567778
Q ss_pred CCCCEEeccCccCccc----CCCCccCCCCCceeeeccccccCc
Q 006570 288 AKLNFVEISHNLLIGK----LPSCIGSNSLNRTVVSTWNCLSGV 327 (640)
Q Consensus 288 ~~L~~L~ls~N~l~~~----~p~~~~~~~~l~~l~l~~N~l~~~ 327 (640)
++|+.|+|++|.|+.. ++..+...+.|+.|++++|.++..
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 8999999999999853 344455678899999999998764
No 402
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.25 E-value=1.8e-11 Score=121.89 Aligned_cols=148 Identities=9% Similarity=0.022 Sum_probs=112.4
Q ss_pred HHHHhcCCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCC
Q 006570 446 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHP 524 (640)
Q Consensus 446 l~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~ 524 (640)
+......|+.....+.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++.
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~------- 80 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER------- 80 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-------
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEe-------
Confidence 3445567877788888888999999864 6899999987533233456899999999884 667888888774
Q ss_pred CCCCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccC---------------------------
Q 006570 525 NTGSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG--------------------------- 577 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~--------------------------- 577 (640)
.....|+||||++|.+|.+.+. +......++.+++++++.||+-
T Consensus 81 -~~~~~~lv~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (263)
T 3tm0_A 81 -HDGWSNLLMSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLA 151 (263)
T ss_dssp -ETTEEEEEEECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCS
T ss_pred -cCCceEEEEEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccc
Confidence 2345799999999999987642 1122346788889999999971
Q ss_pred -----------------------------CCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 578 -----------------------------VAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 578 -----------------------------~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
....++|+|++|.||+++++..+.|+||+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 152 DVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998776678999998754
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=6.9e-11 Score=117.21 Aligned_cols=130 Identities=13% Similarity=0.026 Sum_probs=94.0
Q ss_pred ccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcc--cceeeeEEEecccCCCCCCCeEEEEEEcc
Q 006570 460 GEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH--LVSILGHCILTYQDHPNTGSTVFLVLEHI 537 (640)
Q Consensus 460 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~ 537 (640)
+.|..+.||++...+|..+++|..... ....+.+|+++++.+.+.+ +.+++++.. .++..++||||+
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~--------~~~~~~~v~e~i 97 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVT--------EAGRDWLLLGEV 97 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE--------CSSCEEEEEECC
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEecc--------CCCCCEEEEEec
Confidence 456669999998777888999987643 2356788999998885544 455777653 234479999999
Q ss_pred CCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC---------------------------------------
Q 006570 538 SNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV--------------------------------------- 578 (640)
Q Consensus 538 ~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--------------------------------------- 578 (640)
+|.++. ... .+ ...++.++++.|+.||+..
T Consensus 98 ~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 98 PGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp SSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred CCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 998884 211 11 2356677777777777521
Q ss_pred ----------------CCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 579 ----------------APGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 579 ----------------~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
...++|+|++|.||+++++..+.|.|||.+...
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 123999999999999988777789999998653
No 404
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.98 E-value=6.9e-11 Score=122.87 Aligned_cols=186 Identities=18% Similarity=0.180 Sum_probs=106.0
Q ss_pred hhhhcCCCCCcEeecccCcC---------cCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCcc
Q 006570 117 FTILTKLSNLKVLSLVSLGL---------WGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGS 187 (640)
Q Consensus 117 ~~~l~~l~~L~~L~L~~n~l---------~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 187 (640)
..++.++++|+.|.+..+.. .+.++..+..+++|+.|+|++|.-. .+|. +. +++|+.|+|..|.++..
T Consensus 132 ~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~ 208 (362)
T 2ra8_A 132 VENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDS 208 (362)
T ss_dssp HTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHH
T ss_pred HHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChH
Confidence 34456778888888865432 1234455677888889988887311 3343 33 78888888888877543
Q ss_pred CCC-c--cCcCcCCeeEccC--CCCCCCCCCcccccceeecccCcccccCCccc--cCCCCccEEEccCCcccCcCCccc
Q 006570 188 VPD-L--QRLVLLEELNLGG--NDFGPKFPSLSKNIVSVILRNNSLRSEIPSGL--KNFDQLKQFDISSNNFVGPIQSFL 260 (640)
Q Consensus 188 ~~~-~--~~l~~L~~L~L~~--N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~ 260 (640)
.-. + ..+++|++|+|+. |...+.. .+. .+...+ ..+++|+.|+|++|.+....+..+
T Consensus 209 ~l~~l~~~~lp~L~~L~L~~~~~~~~~~~---------------~~~-~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~l 272 (362)
T 2ra8_A 209 VVEDILGSDLPNLEKLVLYVGVEDYGFDG---------------DMN-VFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMF 272 (362)
T ss_dssp HHHHHHHSBCTTCCEEEEECBCGGGTCCS---------------CGG-GTGGGSCTTTCTTCCEEEEESCTTHHHHHHHH
T ss_pred HHHHHHHccCCCCcEEEEeccccccccch---------------hHH-HHHHHHhcCCCCCcCEEeCCCCCCchHHHHHH
Confidence 222 3 3678888888753 2211110 000 000111 245677777777777764333333
Q ss_pred c---CCCCCcEEEccCCcCCcc----CCccccCCCCCCEEeccCccCcccCCCCccC-CCCCceeeecccc
Q 006570 261 F---SLPSILYLNLAGNQLSEA----LPVNISCSAKLNFVEISHNLLIGKLPSCIGS-NSLNRTVVSTWNC 323 (640)
Q Consensus 261 ~---~l~~L~~L~l~~N~l~~~----~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~-~~~l~~l~l~~N~ 323 (640)
. .+++|+.|+|+.|++.+. ++..+..+++|+.|++++|.++...-..+.. + ...++++.|.
T Consensus 273 a~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 273 LESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 2 466777777777777653 3333345677777888777766432222221 1 2446666655
No 405
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.94 E-value=2.2e-09 Score=112.02 Aligned_cols=144 Identities=12% Similarity=0.154 Sum_probs=104.3
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEee--ccc-CCChHHHHHHHHHHhcCC--CcccceeeeEEEecccCCCCCCCeE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLK--LKQ-RHLPQSLMQHVELLSKLR--HRHLVSILGHCILTYQDHPNTGSTV 530 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~g~~~~~~~~~~~~~~~~ 530 (640)
.+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+. +..+.++++++... ......
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~-----~~~g~~ 116 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDE-----SVIGRA 116 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCT-----TTTSSC
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCC-----CccCCe
Confidence 5678999999999998754 678888775 322 122457888999999886 45577888876421 112346
Q ss_pred EEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC--------------------------------
Q 006570 531 FLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV-------------------------------- 578 (640)
Q Consensus 531 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-------------------------------- 578 (640)
|+||||+++..+.+.. ...++..++..++.++++.|+.||.-.
T Consensus 117 ~~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 117 FYIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp EEEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 8999999998775422 223678888899999999999999620
Q ss_pred -----------------------CCCeeccCCCCCceeecCCCc--eEEeCCCCCcc
Q 006570 579 -----------------------APGIFGNNLKTENILLDKALT--AKLSGYNIPLP 610 (640)
Q Consensus 579 -----------------------~~~iiHrDlk~~NILl~~~~~--~kl~DfGla~~ 610 (640)
...++|+|+++.||+++.++. +.|.||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999999864
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.90 E-value=4.6e-10 Score=116.63 Aligned_cols=180 Identities=12% Similarity=0.173 Sum_probs=104.1
Q ss_pred CCCcEeecccCcCcC-C-------CCccccCCCCCCEEEcccCccc---------ccCCccccCCCCCCEEEccCccCCc
Q 006570 124 SNLKVLSLVSLGLWG-P-------LPSKINRFWSLEVLNISSNFIY---------GEIPMEITSLKNLKSIVLADNLLNG 186 (640)
Q Consensus 124 ~~L~~L~L~~n~l~~-~-------~p~~~~~l~~L~~L~Ls~N~l~---------~~~p~~~~~l~~L~~L~L~~N~l~~ 186 (640)
+.++.|.+......| . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-..
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~ 186 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS 186 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce
Confidence 345566665444432 1 1223456677888877654321 1122333445555555555542111
Q ss_pred cCCCccCcCcCCeeEccCCCCCCCCCCcccccceeecccCcccccCCcccc--CCCCccEEEccC--CcccCc-----CC
Q 006570 187 SVPDLQRLVLLEELNLGGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLK--NFDQLKQFDISS--NNFVGP-----IQ 257 (640)
Q Consensus 187 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p 257 (640)
++.+. + ++|+.|+|..|.++......+. .+++|+.|+|+. |...+. +.
T Consensus 187 -l~~~~-~---------------------~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~ 243 (362)
T 2ra8_A 187 -IGKKP-R---------------------PNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR 243 (362)
T ss_dssp -CCSCB-C---------------------TTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG
T ss_pred -ecccc-C---------------------CCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHH
Confidence 11121 3 4455555555544432222332 678888888863 332221 11
Q ss_pred ccc--cCCCCCcEEEccCCcCCccCCccc---cCCCCCCEEeccCccCccc----CCCCccCCCCCceeeeccccccC
Q 006570 258 SFL--FSLPSILYLNLAGNQLSEALPVNI---SCSAKLNFVEISHNLLIGK----LPSCIGSNSLNRTVVSTWNCLSG 326 (640)
Q Consensus 258 ~~~--~~l~~L~~L~l~~N~l~~~~p~~~---~~~~~L~~L~ls~N~l~~~----~p~~~~~~~~l~~l~l~~N~l~~ 326 (640)
..+ ..+++|+.|+|.+|.+....+..+ ..+++|+.|||+.|.+.+. ++..+..+++|+.|+++.|+++.
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 122 257999999999999975433333 2578999999999999874 44455567899999999998775
No 407
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.88 E-value=5e-08 Score=103.00 Aligned_cols=126 Identities=15% Similarity=0.006 Sum_probs=66.4
Q ss_pred CcEEEEEecCCCCCCCCCCCCcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCc-------------------
Q 006570 75 SRVTELTVIGNKSSPAHSPKPTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLG------------------- 135 (640)
Q Consensus 75 ~~v~~l~l~~~~~~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~------------------- 135 (640)
..++++.|..+ + ..++...+.+...|+.++|+++ +...-..+|.+++.|+.+.+..+-
T Consensus 71 ~~L~~i~lp~~-i-~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~ 147 (394)
T 4fs7_A 71 RKVTEIKIPST-V-REIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIP 147 (394)
T ss_dssp TTEEEEECCTT-C-CEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECC
T ss_pred CCceEEEeCCC-c-cCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccccccC
Confidence 35666766533 2 1233334445567777777654 222233456666666665554321
Q ss_pred --CcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCCCEEEccCccCCccCCC-ccCcCcCCeeEccCC
Q 006570 136 --LWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGN 205 (640)
Q Consensus 136 --l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N 205 (640)
....-...|.++++|+.+.+..+... .-...|.++.+|+.+.+..| ++.+... |.++..|+.+.+..+
T Consensus 148 ~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~ 218 (394)
T 4fs7_A 148 EGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNS 218 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTT
T ss_pred ccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCC
Confidence 00111234666777777777655332 44445667777777777655 3333332 555666665555443
No 408
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.85 E-value=3.9e-08 Score=103.85 Aligned_cols=217 Identities=12% Similarity=0.019 Sum_probs=145.1
Q ss_pred CcCCCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccccCCccccCCCCC
Q 006570 95 PTFGKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYGEIPMEITSLKNL 174 (640)
Q Consensus 95 ~~~~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 174 (640)
.+.+...|+.+.++++. ...-..+|.++++|+.+++..| +...-...|.++..|+.+.+..+... +.+......+|
T Consensus 157 aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l 232 (394)
T 4fs7_A 157 AFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGV 232 (394)
T ss_dssp TTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCC
T ss_pred hhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCC
Confidence 34455778888887654 2344567888999999988766 54444567888888888888776543 33444556788
Q ss_pred CEEEccCccCCccCCC-ccCcCcCCeeEccCCCCC--CCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCc
Q 006570 175 KSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDFG--PKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNN 251 (640)
Q Consensus 175 ~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l~--~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 251 (640)
+.+.+..+ ++.+... |..+..|+.+.+..+... .........++.+....+.+ ....|..+.+|+.+.+..+
T Consensus 233 ~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~- 307 (394)
T 4fs7_A 233 KNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS- 307 (394)
T ss_dssp CEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-
T ss_pred ceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee---ccccccccccccccccccc-
Confidence 88877644 3333333 777888888888766432 11122245666666655443 2346777888888888654
Q ss_pred ccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccc
Q 006570 252 FVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWN 322 (640)
Q Consensus 252 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N 322 (640)
++..-..+|.++.+|+.++|..+ ++.+-..+|.++.+|+.+++..| ++..-..+|.++.+|+.+++..+
T Consensus 308 i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 308 VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 55455667778888888888644 66555677888888888888766 66555667888888888887654
No 409
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.64 E-value=1.2e-06 Score=92.44 Aligned_cols=86 Identities=10% Similarity=0.131 Sum_probs=40.2
Q ss_pred ccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCC
Q 006570 234 SGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSL 313 (640)
Q Consensus 234 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~ 313 (640)
..|.++.+|+.+.+. +.++......|.++.+|+.++|..| ++.+-..+|.++.+|+.+.+..+ ++..-..+|.++++
T Consensus 282 ~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~ 358 (394)
T 4gt6_A 282 GAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTA 358 (394)
T ss_dssp TTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTT
T ss_pred cccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCC
Confidence 334444444444443 2333333344555555555555433 33333445555555555555433 33233344555555
Q ss_pred Cceeeeccc
Q 006570 314 NRTVVSTWN 322 (640)
Q Consensus 314 l~~l~l~~N 322 (640)
|+.+++.+|
T Consensus 359 L~~i~~~~~ 367 (394)
T 4gt6_A 359 LNNIEYSGS 367 (394)
T ss_dssp CCEEEESSC
T ss_pred CCEEEECCc
Confidence 555555444
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.61 E-value=3.8e-09 Score=104.28 Aligned_cols=92 Identities=27% Similarity=0.309 Sum_probs=54.2
Q ss_pred hcCCCCCcE--eecccCcC---cCCCCccccCCCCCCEEEcccCcccc--cCCccccCCCCCCEEEccCccCCccCCCcc
Q 006570 120 LTKLSNLKV--LSLVSLGL---WGPLPSKINRFWSLEVLNISSNFIYG--EIPMEITSLKNLKSIVLADNLLNGSVPDLQ 192 (640)
Q Consensus 120 l~~l~~L~~--L~L~~n~l---~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 192 (640)
|...+.|.. ++++.|.. .+.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. .++.
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~ 215 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELD 215 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhh
Confidence 444444544 55566632 22222222456777888888887776 4556666777777777777777765 2233
Q ss_pred CcC--cCCeeEccCCCCCCCCC
Q 006570 193 RLV--LLEELNLGGNDFGPKFP 212 (640)
Q Consensus 193 ~l~--~L~~L~L~~N~l~~~~~ 212 (640)
.+. +|++|+|++|.+.+.+|
T Consensus 216 ~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 216 KIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp GGTTSCCSEEECTTSTTGGGCS
T ss_pred hcccCCcceEEccCCcCccccC
Confidence 333 66666666666654443
No 411
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.58 E-value=4.7e-08 Score=99.31 Aligned_cols=168 Identities=15% Similarity=0.161 Sum_probs=110.4
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC-Ccc--cceeeeEEEecccCCCCCCCeEEE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRH--LVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
.+.++.|.+..||+.. ..+++|+.... .....+.+|.++|+.+. +.. +.++++... + .......|+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~----~-~~~~~~~~~ 93 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGM----P-SETYQMSFA 93 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECC----C-CSSCSCSCE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecC----C-CCCCCcceE
Confidence 4668999999999874 46888886532 23467899999998873 333 333433321 1 011123589
Q ss_pred EEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhccc------------------------------------
Q 006570 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT------------------------------------ 576 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~------------------------------------ 576 (640)
||||++|.++.+... ..++..++..++.++++.++.||+
T Consensus 94 vm~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
T 3sg8_A 94 GFTKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGP 168 (304)
T ss_dssp EEECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHH
T ss_pred EEcccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcc
Confidence 999999988865332 124566666677777777666664
Q ss_pred -------------------CCCCCeeccCCCCCceeecC--CCceEEeCCCCCccccCC--------C---Cc-------
Q 006570 577 -------------------GVAPGIFGNNLKTENILLDK--ALTAKLSGYNIPLPSKVR--------N---TL------- 617 (640)
Q Consensus 577 -------------------~~~~~iiHrDlk~~NILl~~--~~~~kl~DfGla~~~~~~--------~---~~------- 617 (640)
...+.++|+|++|.||++++ +..+.|.||+.+...... . ..
T Consensus 169 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 248 (304)
T 3sg8_A 169 QMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKI 248 (304)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHH
T ss_pred cHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHH
Confidence 11246899999999999998 566889999998643221 0 00
Q ss_pred --cCC-----------CCccceehhhHHHHHHhhc
Q 006570 618 --SFH-----------TDRSSLYKIILIICVITLC 639 (640)
Q Consensus 618 --~~~-----------~~~~DvwS~Gvvl~elltG 639 (640)
... ....+.|++|.+++++.+|
T Consensus 249 l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g 283 (304)
T 3sg8_A 249 LNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYG 283 (304)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 000 1125889999999999887
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.55 E-value=2.1e-08 Score=98.93 Aligned_cols=79 Identities=27% Similarity=0.368 Sum_probs=66.9
Q ss_pred cCCCCCcEeecccCcCcC--CCCccccCCCCCCEEEcccCcccccCCccccCCC--CCCEEEccCccCCccCCC------
Q 006570 121 TKLSNLKVLSLVSLGLWG--PLPSKINRFWSLEVLNISSNFIYGEIPMEITSLK--NLKSIVLADNLLNGSVPD------ 190 (640)
Q Consensus 121 ~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~------ 190 (640)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|+.|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 678999999999999988 5677788999999999999999965 3455555 999999999999987662
Q ss_pred --ccCcCcCCeeE
Q 006570 191 --LQRLVLLEELN 201 (640)
Q Consensus 191 --~~~l~~L~~L~ 201 (640)
+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 56788888876
No 413
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.50 E-value=4.2e-07 Score=91.32 Aligned_cols=140 Identities=16% Similarity=0.139 Sum_probs=92.7
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCc---ccceeeeEEEecccCCCCCCCeEEE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHR---HLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
.+.|+.|.++.||+++..+|+.++||+...........+.+|++.|+.+++. .+.+++++. ..++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~------------~~~l 87 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------------DRTL 87 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------------TTEE
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec------------CcEE
Confidence 5678999999999999888999999997644333457899999999999765 577777653 1489
Q ss_pred EEEccCCCCHhH--------H---hhccCCC------------------CCCCHHHHH----------------------
Q 006570 533 VLEHISNGSLRD--------Y---LTDWKKK------------------DMLKWPQRM---------------------- 561 (640)
Q Consensus 533 v~Ey~~~GsL~~--------~---l~~~~~~------------------~~l~~~~~~---------------------- 561 (640)
||||++++++.. . ||..... ..-+|....
T Consensus 88 vme~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~ 167 (288)
T 3d1u_A 88 AMEWVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGD 167 (288)
T ss_dssp EEECCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHH
T ss_pred EEEecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999987531 1 2221100 012343221
Q ss_pred -HHHHHHHHHhh-hcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCc
Q 006570 562 -AIIIGATRGVQ-FLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPL 609 (640)
Q Consensus 562 -~i~~~ia~~L~-yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~ 609 (640)
.....++..+. .+-....+.++|+|+.+.||+++.+ .+.|.|| .+.
T Consensus 168 ~~~~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 168 VRLVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHHHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 11111222221 1112234789999999999999884 5889999 654
No 414
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.46 E-value=4.5e-06 Score=87.91 Aligned_cols=86 Identities=7% Similarity=0.109 Sum_probs=60.8
Q ss_pred CccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCC
Q 006570 233 PSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNS 312 (640)
Q Consensus 233 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~ 312 (640)
..+|.++.+|+.+.+..+..+ .....|.++++|+.+.+. +.++..-...|.++.+|+.+++..| ++..-..+|.++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 456777788888888765443 455667778888888885 4565555667888888888888765 5545566788888
Q ss_pred CCceeeecc
Q 006570 313 LNRTVVSTW 321 (640)
Q Consensus 313 ~l~~l~l~~ 321 (640)
+|+.+.+..
T Consensus 335 ~L~~i~ip~ 343 (394)
T 4gt6_A 335 QLERIAIPS 343 (394)
T ss_dssp TCCEEEECT
T ss_pred CCCEEEECc
Confidence 888887753
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.40 E-value=5.3e-07 Score=92.23 Aligned_cols=137 Identities=13% Similarity=0.150 Sum_probs=95.4
Q ss_pred CCCCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCC----cccceeeeEEEecccCCCCCC
Q 006570 452 NFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH----RHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 452 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~g~~~~~~~~~~~~~ 527 (640)
.+...+.++.|....||+. +..+++|+..... ....+.+|.+++..+.+ ..+.+++++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~------------ 99 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ------------ 99 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE------------
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec------------
Confidence 5566778999999999998 6678888764321 23568899998888865 123444433
Q ss_pred CeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCC-----------------------------
Q 006570 528 STVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGV----------------------------- 578 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----------------------------- 578 (640)
...++||||++|.++.+... ..++..++..++.++++.++.||+-.
T Consensus 100 ~~~~lvme~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (320)
T 3r70_A 100 SDRFNIMKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISI 174 (320)
T ss_dssp CSSCEEEECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHH
Confidence 12489999999988863321 12455555666666666666666311
Q ss_pred -------------------------------CCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 579 -------------------------------APGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 579 -------------------------------~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
.+.++|+|++|.||+++++..+.|.||+.+...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 175 LEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 134699999999999999766799999998643
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.39 E-value=4e-08 Score=92.05 Aligned_cols=121 Identities=19% Similarity=0.200 Sum_probs=80.8
Q ss_pred hhhhhcCCCCCcEeecccC-cCcCC----CCccccCCCCCCEEEcccCccccc----CCccccCCCCCCEEEccCccCCc
Q 006570 116 FFTILTKLSNLKVLSLVSL-GLWGP----LPSKINRFWSLEVLNISSNFIYGE----IPMEITSLKNLKSIVLADNLLNG 186 (640)
Q Consensus 116 ~~~~l~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 186 (640)
+...+...+.|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4556788889999999998 77432 345567778899999999988742 34445556788888888888875
Q ss_pred c-----CCCccCcCcCCeeEc--cCCCCCCCCCCcccccceeecccCcccccCCccccCCCCccEEEccCCccc
Q 006570 187 S-----VPDLQRLVLLEELNL--GGNDFGPKFPSLSKNIVSVILRNNSLRSEIPSGLKNFDQLKQFDISSNNFV 253 (640)
Q Consensus 187 ~-----~~~~~~l~~L~~L~L--~~N~l~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 253 (640)
. ...+...++|++|+| ++|.++..-.. .+...+...++|++|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~-----------------~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEM-----------------EIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH-----------------HHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHH-----------------HHHHHHHhCCCcCEEeccCCCCC
Confidence 3 223666677888888 66776432110 12233444567777777777764
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.36 E-value=5.9e-08 Score=90.85 Aligned_cols=109 Identities=20% Similarity=0.165 Sum_probs=83.6
Q ss_pred ccccccccCcc-CCCCh----hhhhhcCCCCCcEeecccCcCcCC----CCccccCCCCCCEEEcccCccccc----CCc
Q 006570 100 FSASQQSLSAN-FNIDR----FFTILTKLSNLKVLSLVSLGLWGP----LPSKINRFWSLEVLNISSNFIYGE----IPM 166 (640)
Q Consensus 100 ~~l~~l~l~~n-~~~~~----~~~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 166 (640)
+.++.|+|++| .+... +...+...+.|++|+|++|.+... +...+...++|++|+|++|.|... +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 46677777777 66543 455678889999999999998532 345566778999999999999854 566
Q ss_pred cccCCCCCCEEEc--cCccCCccC-----CCccCcCcCCeeEccCCCCC
Q 006570 167 EITSLKNLKSIVL--ADNLLNGSV-----PDLQRLVLLEELNLGGNDFG 208 (640)
Q Consensus 167 ~~~~l~~L~~L~L--~~N~l~~~~-----~~~~~l~~L~~L~L~~N~l~ 208 (640)
.+...++|++|+| ++|.|...- ..+...++|++|+|++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 7788899999999 889997532 12566688999999998874
No 418
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.23 E-value=4.4e-05 Score=79.70 Aligned_cols=86 Identities=13% Similarity=0.070 Sum_probs=41.0
Q ss_pred CccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCC
Q 006570 233 PSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNS 312 (640)
Q Consensus 233 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~ 312 (640)
...|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +.......|..+.+|+.+++.++.++..-+.+|.++.
T Consensus 233 ~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~ 310 (379)
T 4h09_A 233 DGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCV 310 (379)
T ss_dssp TTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCT
T ss_pred cccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCC
Confidence 344455555555555443 33333344445555555555332 3333333445555555555555555444444455555
Q ss_pred CCceeeec
Q 006570 313 LNRTVVST 320 (640)
Q Consensus 313 ~l~~l~l~ 320 (640)
+|+.+.+.
T Consensus 311 ~L~~i~lp 318 (379)
T 4h09_A 311 KLSSVTLP 318 (379)
T ss_dssp TCCEEECC
T ss_pred CCCEEEcC
Confidence 55555543
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.22 E-value=5.6e-06 Score=82.15 Aligned_cols=136 Identities=13% Similarity=0.076 Sum_probs=90.5
Q ss_pred ccccCCcc-ceEEEEeC-CCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 458 LIGEGSQG-QLYKGFLT-DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 458 ~ig~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
.+..|..| .||+.... ++..+.+|+-... ...++.+|.+.|+.+. +--+.++++++. ..+..++||
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~--------~~~~~~lvm 99 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIR--------TPDDAWLLT 99 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEE--------ETTEEEEEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEE--------ECCeEEEEE
Confidence 45556655 58988754 4667899987633 3467888999988774 333667777764 234579999
Q ss_pred EccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccC-------------------------------------
Q 006570 535 EHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTG------------------------------------- 577 (640)
Q Consensus 535 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------- 577 (640)
|++++.++.+.... .......++.++++.|+-||.-
T Consensus 100 e~l~G~~~~~~~~~-------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 100 TAIPGKTAFQVLEE-------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp ECCCSEEHHHHHHH-------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred EeeCCccccccccC-------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 99999887765432 1112233444444444444430
Q ss_pred ------------------CCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 578 ------------------VAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 578 ------------------~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
..+.++|+|+.+.||++++++.+-|.||+.+...
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 1134799999999999998877789999998653
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.21 E-value=3.4e-06 Score=85.51 Aligned_cols=138 Identities=12% Similarity=0.097 Sum_probs=87.5
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCc---ccceeeeEEEecccCCCCCCCeEEE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHR---HLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
.+.++.|....||+. |..+++|+-.. ......+.+|.++|+.+.+. .+.+++.++. ......++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~-------~~~g~~~~ 90 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK-------RSDGNPFV 90 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE-------CTTSCEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc-------cCCCceEE
Confidence 355778888899987 56788887532 12346789999999998653 3455555543 12234689
Q ss_pred EEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhccc------------------------------------
Q 006570 533 VLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHT------------------------------------ 576 (640)
Q Consensus 533 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~------------------------------------ 576 (640)
||||++|.++.+..-. .++..++..++.++++.|+.||+
T Consensus 91 v~e~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~ 165 (306)
T 3tdw_A 91 GYRKVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLD 165 (306)
T ss_dssp EEECCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSC
T ss_pred EEeccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccc
Confidence 9999999887653110 12222333333333333333332
Q ss_pred ---------------------CCCCCeeccCCCCCceeecC---CCc-eEEeCCCCCccc
Q 006570 577 ---------------------GVAPGIFGNNLKTENILLDK---ALT-AKLSGYNIPLPS 611 (640)
Q Consensus 577 ---------------------~~~~~iiHrDlk~~NILl~~---~~~-~kl~DfGla~~~ 611 (640)
...+.++|+|+++.||+++. ++. ..|.||+.+...
T Consensus 166 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 166 ESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred hhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 02256799999999999987 344 589999988654
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.02 E-value=1.3e-05 Score=83.32 Aligned_cols=143 Identities=8% Similarity=0.096 Sum_probs=88.9
Q ss_pred CCCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcc--cceeeeEEEecccCCCCCCCeEE
Q 006570 454 DPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH--LVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 454 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
...+.++.|....+|+... ++..+++|..... ..+.+|..++..+.... +.++++++.. .....|
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~-------~~g~~~ 110 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEF-------SESLTY 110 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEES-------SSSCEE
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccC-------CCCCeE
Confidence 3456688899999999886 5788999977422 36889999998886433 4566665531 113579
Q ss_pred EEEEccCCCCHhHH------------------hhccCCCC--C------------CCHHHH-------------------
Q 006570 532 LVLEHISNGSLRDY------------------LTDWKKKD--M------------LKWPQR------------------- 560 (640)
Q Consensus 532 lv~Ey~~~GsL~~~------------------l~~~~~~~--~------------l~~~~~------------------- 560 (640)
+||||+++.++.+. ||...... . -.|...
T Consensus 111 lv~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~ 190 (362)
T 3ovc_A 111 CISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDT 190 (362)
T ss_dssp EEEECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTT
T ss_pred EEEEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999997655321 11100000 0 011111
Q ss_pred -----HHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 561 -----MAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 561 -----~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
...+..+...+..+-. .+.++|+|+.+.||+++++..+.|.||+.+...
T Consensus 191 ~~~~~~~~~~~l~~~l~~lp~--~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 191 VSASVAQALDELMLWAEDCPE--VRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp THHHHHHHHHHHHHHGGGCCC--CCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred ccccchHHHHHHHHHHhhCCC--CcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 0111222222332222 257899999999999988878889999998654
No 422
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.96 E-value=1.3e-05 Score=83.01 Aligned_cols=82 Identities=6% Similarity=-0.021 Sum_probs=53.9
Q ss_pred Ccc-ccCCccceEEEEeC-------CCcEEEEEEeeccc---CCChHHHHHHHHHHhcCCC---cccceeeeEEEecccC
Q 006570 457 NLI-GEGSQGQLYKGFLT-------DGSRVSVKCLKLKQ---RHLPQSLMQHVELLSKLRH---RHLVSILGHCILTYQD 522 (640)
Q Consensus 457 ~~i-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~~~~~ 522 (640)
+.| +.|....+|+.... ++..+++|+..... ......+.+|+++++.+.. -.+.++++++...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~--- 102 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG--- 102 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS---
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC---
Confidence 456 78888999998764 26678899875432 1123567888888888742 2466777765311
Q ss_pred CCCCCCeEEEEEEccCCCCHh
Q 006570 523 HPNTGSTVFLVLEHISNGSLR 543 (640)
Q Consensus 523 ~~~~~~~~~lv~Ey~~~GsL~ 543 (640)
......++||||++|.++.
T Consensus 103 --~~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 103 --DVLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp --TTTSSCEEEEECCCCBCCC
T ss_pred --CccCCceEEEEecCCCChh
Confidence 1113458999999987654
No 423
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.95 E-value=0.00016 Score=75.40 Aligned_cols=218 Identities=11% Similarity=-0.031 Sum_probs=138.6
Q ss_pred CCccccccccCccCCCChhhhhhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcccCcccc------------cCC
Q 006570 98 GKFSASQQSLSANFNIDRFFTILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNFIYG------------EIP 165 (640)
Q Consensus 98 ~~~~l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~------------~~p 165 (640)
....|+.+.++.+.. ..-..+|.+. .|+.+.+..+ ++..-...|..+.+|+.+.+..+.... ...
T Consensus 111 ~~~~L~~i~lp~~~~-~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (379)
T 4h09_A 111 QGTDLDDFEFPGATT-EIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTIL 187 (379)
T ss_dssp TTCCCSEEECCTTCC-EECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEE
T ss_pred ccCCcccccCCCccc-cccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceeccccccee
Confidence 345677777776532 2222345544 5666665543 434445677888888888877654331 122
Q ss_pred ccccCCCCCCEEEccCccCCccCCCccCcCcCCeeEccCCCCCCCC---CCcccccceeecccCcccccCCccccCCCCc
Q 006570 166 MEITSLKNLKSIVLADNLLNGSVPDLQRLVLLEELNLGGNDFGPKF---PSLSKNIVSVILRNNSLRSEIPSGLKNFDQL 242 (640)
Q Consensus 166 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~l~~~~p~~~~~l~~L 242 (640)
..+.....+..+.+..+.-.-....+....+|+.+.+..+ +.... .....+|+.+.+..+ ++..-...|.++.+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l 265 (379)
T 4h09_A 188 ESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTAL 265 (379)
T ss_dssp EECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTC
T ss_pred ccccccccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehh
Confidence 2344555666665544433222223667777877777654 22111 122467777777665 555556778888888
Q ss_pred cEEEccCCcccCcCCccccCCCCCcEEEccCCcCCccCCccccCCCCCCEEeccCccCcccCCCCccCCCCCceeeeccc
Q 006570 243 KQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQLSEALPVNISCSAKLNFVEISHNLLIGKLPSCIGSNSLNRTVVSTWN 322 (640)
Q Consensus 243 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~l~~l~l~~N 322 (640)
+.+.+..+ +.......|.++++|+.+.+.++.++.+-+..|.++.+|+.++|..+ ++..-..+|.++++|+.+.+..+
T Consensus 266 ~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 266 KTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred cccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 88888654 55455567888888999998888887766778888888999888765 55455667888888888877543
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.81 E-value=7.5e-05 Score=78.50 Aligned_cols=75 Identities=12% Similarity=0.097 Sum_probs=48.3
Q ss_pred CCccccCCccceEEEEeC-CCcEEEEEEeecccC-------CChHHHHHHHHHHhcCCC--cc-cceeeeEEEecccCCC
Q 006570 456 TNLIGEGSQGQLYKGFLT-DGSRVSVKCLKLKQR-------HLPQSLMQHVELLSKLRH--RH-LVSILGHCILTYQDHP 524 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~n-iv~l~g~~~~~~~~~~ 524 (640)
.+.+|.|.++.||+++.. +++.++||....... ...+.+..|.++++.+.. |. +.+++.+.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------- 106 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------- 106 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--------
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--------
Confidence 457899999999999754 467899998653211 234567889998887732 33 34555432
Q ss_pred CCCCeEEEEEEccCCC
Q 006570 525 NTGSTVFLVLEHISNG 540 (640)
Q Consensus 525 ~~~~~~~lv~Ey~~~G 540 (640)
....++||||+++.
T Consensus 107 --~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 107 --TEMAVTVMEDLSHL 120 (397)
T ss_dssp --TTTTEEEECCCTTS
T ss_pred --CCccEEEEEeCCCc
Confidence 11248999999763
No 425
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.72 E-value=0.00014 Score=72.75 Aligned_cols=76 Identities=20% Similarity=0.149 Sum_probs=55.9
Q ss_pred CCCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCC---cccceeeeEEEecccCCCCCCCeEE
Q 006570 455 PTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRH---RHLVSILGHCILTYQDHPNTGSTVF 531 (640)
Q Consensus 455 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~g~~~~~~~~~~~~~~~~~ 531 (640)
..+.+|.|..+.||+.+..||+.|.+|+...........|..|.+.|+.+.- --+.+++++.. -+
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~------------~~ 86 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD------------RT 86 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET------------TE
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccC------------ce
Confidence 3567899999999999999999999998765544445678899998888742 23445554321 37
Q ss_pred EEEEccCCCCH
Q 006570 532 LVLEHISNGSL 542 (640)
Q Consensus 532 lv~Ey~~~GsL 542 (640)
+||||++.+..
T Consensus 87 lv~e~l~~~~~ 97 (288)
T 3f7w_A 87 LAMEWVDERPP 97 (288)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEeecccCC
Confidence 89999987653
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.62 E-value=7.2e-05 Score=76.70 Aligned_cols=147 Identities=16% Similarity=0.174 Sum_probs=79.3
Q ss_pred CccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCc--ccceeeeEEEecccCCCCCCCeEEEEE
Q 006570 457 NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHR--HLVSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
+.|+.|..+.||+....+| .+++|+... ..+++..|.++++.+... .+.+++... .+.......+..+++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~--~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNK--KGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCT--TSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecC--CCCEEEEECCEEEEEE
Confidence 3455577889999987554 588998864 234455566666555311 233333210 0000000134578999
Q ss_pred EccCCCCHh--------------HHhhccCC----C-------CCCCHHHHH----------------------------
Q 006570 535 EHISNGSLR--------------DYLTDWKK----K-------DMLKWPQRM---------------------------- 561 (640)
Q Consensus 535 Ey~~~GsL~--------------~~l~~~~~----~-------~~l~~~~~~---------------------------- 561 (640)
||++|.++. ..+|.... . ..-.|....
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 11221100 0 012332211
Q ss_pred ---HHHHHHHHHhhhccc----------CCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 562 ---AIIIGATRGVQFLHT----------GVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 562 ---~i~~~ia~~L~yLH~----------~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
.+...+..++++|+. .....++|+|+++.||+++.++.+.|.||+.+..
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 011123345666652 0236899999999999998888899999998754
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.38 E-value=4.6e-05 Score=69.64 Aligned_cols=33 Identities=9% Similarity=0.065 Sum_probs=14.6
Q ss_pred ccccccCccCCCChhhhhhcCCCCCcEeecccC
Q 006570 102 ASQQSLSANFNIDRFFTILTKLSNLKVLSLVSL 134 (640)
Q Consensus 102 l~~l~l~~n~~~~~~~~~l~~l~~L~~L~L~~n 134 (640)
|+.|||+++.+++.--..+.++++|+.|+|++|
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 333344433333332333445555555555555
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.28 E-value=5.9e-05 Score=68.94 Aligned_cols=83 Identities=10% Similarity=0.073 Sum_probs=58.0
Q ss_pred CCCcEeecccCcCcCCCCccccCCCCCCEEEcccCc-ccccCCccccCC----CCCCEEEccCcc-CCcc-CCCccCcCc
Q 006570 124 SNLKVLSLVSLGLWGPLPSKINRFWSLEVLNISSNF-IYGEIPMEITSL----KNLKSIVLADNL-LNGS-VPDLQRLVL 196 (640)
Q Consensus 124 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~-~~~~~~l~~ 196 (640)
-.|+.|||+++.++..--..+..+++|++|+|+++. |+..-=..++.+ ++|++|+|+++. ++.. +..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468889999888765433457788889999998885 664333345553 368888888874 6643 223667888
Q ss_pred CCeeEccCCC
Q 006570 197 LEELNLGGND 206 (640)
Q Consensus 197 L~~L~L~~N~ 206 (640)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888888774
No 429
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.23 E-value=0.0036 Score=63.49 Aligned_cols=166 Identities=10% Similarity=0.092 Sum_probs=90.8
Q ss_pred CCCCHHHHHHHhcCCCC-----CCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcc--cce
Q 006570 439 RGFSLEEIEEATNNFDP-----TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH--LVS 511 (640)
Q Consensus 439 ~~~~~~~l~~~~~~~~~-----~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 511 (640)
...+.+++......|.. ...++ |....||+....+|+.+++|...... ...+.+..|.+++..+.... +.+
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecc
Confidence 34555666555554432 23466 77789999887777789999986332 24567778888887774222 344
Q ss_pred eeeEEEecccCCCCCCCeEEEEEEccCCCCHh-----HH---------hhcc-C-----CCCCCCHHHH-----------
Q 006570 512 ILGHCILTYQDHPNTGSTVFLVLEHISNGSLR-----DY---------LTDW-K-----KKDMLKWPQR----------- 560 (640)
Q Consensus 512 l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~-----~~---------l~~~-~-----~~~~l~~~~~----------- 560 (640)
++.. .+......++..+++|||++|.++. .+ +|.. . .....++...
T Consensus 87 ~~~~---~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 163 (328)
T 1zyl_A 87 PVAF---NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDA 163 (328)
T ss_dssp CCCB---TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTC
T ss_pred eeec---CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhc
Confidence 4432 0100000133568899999875432 10 1110 0 0111222211
Q ss_pred -----------HHHHHHHHHHhhh-cccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 561 -----------MAIIIGATRGVQF-LHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 561 -----------~~i~~~ia~~L~y-LH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
...+..++..++- +.......++|+|+++.||+++ + .+.|.||+.+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 164 TLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp SSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 0111111122221 1111235789999999999999 4 8999999887643
No 430
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.22 E-value=0.0022 Score=64.72 Aligned_cols=138 Identities=15% Similarity=0.126 Sum_probs=88.8
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCC---CcccceeeeEEEecccCCCCCCCeEEE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR---HRHLVSILGHCILTYQDHPNTGSTVFL 532 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~~~~~~~~~~~~~l 532 (640)
.+.|+.|.+..+|+... ++..+++|+.... ....+..|.+.|+.+. ...+.++++++. .....++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~--------~~g~~~l 108 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGN--------SQGHSFL 108 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE--------CSSEEEE
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEee--------cCCceEE
Confidence 45689999999999986 4678888987643 3567889999888873 356778887764 2345799
Q ss_pred EEEccCCCCHhH-----------HhhccCC-C------------------CCCCHHHHH---HHH--HH-----------
Q 006570 533 VLEHISNGSLRD-----------YLTDWKK-K------------------DMLKWPQRM---AII--IG----------- 566 (640)
Q Consensus 533 v~Ey~~~GsL~~-----------~l~~~~~-~------------------~~l~~~~~~---~i~--~~----------- 566 (640)
||||+++..+.. -||.... . ..-+|.... ++. .+
T Consensus 109 vme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~ 188 (312)
T 3jr1_A 109 LLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGN 188 (312)
T ss_dssp EEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSC
T ss_pred EEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 999999876521 1222111 0 012454321 111 11
Q ss_pred ---HHHH-hhhcc-cCCCCCeeccCCCCCceeecCCCceEEeCCC
Q 006570 567 ---ATRG-VQFLH-TGVAPGIFGNNLKTENILLDKALTAKLSGYN 606 (640)
Q Consensus 567 ---ia~~-L~yLH-~~~~~~iiHrDlk~~NILl~~~~~~kl~DfG 606 (640)
+... ...|. ....+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 189 ~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 189 IDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1111 12332 12347899999999999999887 8899984
No 431
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.08 E-value=0.0016 Score=66.03 Aligned_cols=166 Identities=11% Similarity=0.095 Sum_probs=89.4
Q ss_pred CCCHHHHHHHhcCCCCC-----CccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcc--ccee
Q 006570 440 GFSLEEIEEATNNFDPT-----NLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH--LVSI 512 (640)
Q Consensus 440 ~~~~~~l~~~~~~~~~~-----~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l 512 (640)
.++.+++......|... +.|+.|....+|+....+| .+++|..... ...+++..|++++..+.... +.++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 45667777777777653 3355677789999987655 6788988642 12345667888777663222 2333
Q ss_pred eeEEEecccCCCCCCCeEEEEEEccCCCCHhH--------------HhhccC-C---C--CC---CCHHHHHHH------
Q 006570 513 LGHCILTYQDHPNTGSTVFLVLEHISNGSLRD--------------YLTDWK-K---K--DM---LKWPQRMAI------ 563 (640)
Q Consensus 513 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~--------------~l~~~~-~---~--~~---l~~~~~~~i------ 563 (640)
+... .+.......+..+++|||++|..+.. -+|... . . .. ..|.....-
T Consensus 83 ~~~~--~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 83 LPRK--DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CCBT--TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cCCC--CCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 3210 00000001234689999998755321 112110 0 0 00 113221110
Q ss_pred ------HHHHHHHhhhccc----CCCCCeeccCCCCCceeecCCCceEEeCCCCCcc
Q 006570 564 ------IIGATRGVQFLHT----GVAPGIFGNNLKTENILLDKALTAKLSGYNIPLP 610 (640)
Q Consensus 564 ------~~~ia~~L~yLH~----~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~ 610 (640)
...+.+.++++++ .....++|+|+.+.||+++++..+.|.||+.+..
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 0012233334331 1235799999999999999876668999998764
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.03 E-value=0.002 Score=68.13 Aligned_cols=31 Identities=6% Similarity=0.217 Sum_probs=27.8
Q ss_pred CCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 580 PGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 580 ~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
+.++|+|+++.||+++.++ +++.||+.+...
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 6899999999999998876 999999998754
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.03 E-value=0.00084 Score=58.28 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=21.3
Q ss_pred CccEEEccCCcccCcCCccccCCCCCcEEEccCCcC
Q 006570 241 QLKQFDISSNNFVGPIQSFLFSLPSILYLNLAGNQL 276 (640)
Q Consensus 241 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 276 (640)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 455666666666555555555666666666666655
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.98 E-value=0.001 Score=57.68 Aligned_cols=35 Identities=31% Similarity=0.469 Sum_probs=18.1
Q ss_pred CCCEEEccCccCCccCCC-ccCcCcCCeeEccCCCC
Q 006570 173 NLKSIVLADNLLNGSVPD-LQRLVLLEELNLGGNDF 207 (640)
Q Consensus 173 ~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L~~N~l 207 (640)
+|+.|+|++|+|+.++++ |..+++|++|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 455555555555554444 45555555555555543
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.76 E-value=0.013 Score=59.54 Aligned_cols=32 Identities=6% Similarity=0.031 Sum_probs=27.9
Q ss_pred CCeeccCCCCCceeecCC----CceEEeCCCCCccc
Q 006570 580 PGIFGNNLKTENILLDKA----LTAKLSGYNIPLPS 611 (640)
Q Consensus 580 ~~iiHrDlk~~NILl~~~----~~~kl~DfGla~~~ 611 (640)
..++|+|+.+.||+++.+ ..+.|.||+.+...
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 689999999999999875 67899999988653
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.64 E-value=0.00039 Score=64.71 Aligned_cols=89 Identities=15% Similarity=0.168 Sum_probs=49.5
Q ss_pred cccCCCCccEEEccCCcccCc----CCccccCCCCCcEEEccCCcCCcc----CCccccCCCCCCEEeccCcc---Ccc-
Q 006570 235 GLKNFDQLKQFDISSNNFVGP----IQSFLFSLPSILYLNLAGNQLSEA----LPVNISCSAKLNFVEISHNL---LIG- 302 (640)
Q Consensus 235 ~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~~~~L~~L~ls~N~---l~~- 302 (640)
.+..-+.|+.|+|++|+|... +-+.+..-+.|+.|+|++|+|... +-..+..-+.|+.|+|++|. +..
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~ 144 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ 144 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHH
Confidence 344445677777777777532 223333456677777777777532 22344455667777777552 221
Q ss_pred ---cCCCCccCCCCCceeeecccc
Q 006570 303 ---KLPSCIGSNSLNRTVVSTWNC 323 (640)
Q Consensus 303 ---~~p~~~~~~~~l~~l~l~~N~ 323 (640)
.+...+...+.|+.++++.|.
T Consensus 145 g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 145 VEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHHHhCCCcCeEeccCCC
Confidence 122334455667777766554
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.63 E-value=0.0003 Score=65.49 Aligned_cols=87 Identities=11% Similarity=0.090 Sum_probs=48.2
Q ss_pred hhhcCCCCCcEeecccC-cCcC----CCCccccCCCCCCEEEcccCcccccC----CccccCCCCCCEEEccCccCCccC
Q 006570 118 TILTKLSNLKVLSLVSL-GLWG----PLPSKINRFWSLEVLNISSNFIYGEI----PMEITSLKNLKSIVLADNLLNGSV 188 (640)
Q Consensus 118 ~~l~~l~~L~~L~L~~n-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~ 188 (640)
..+.+-+.|+.|+|++| .|.. .+-..+..-+.|+.|+|++|.|...- ...+..-+.|+.|+|+.|.|...-
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34566677888888775 6531 13344555667777777777776332 222334456666666666665321
Q ss_pred C-----CccCcCcCCeeEccC
Q 006570 189 P-----DLQRLVLLEELNLGG 204 (640)
Q Consensus 189 ~-----~~~~l~~L~~L~L~~ 204 (640)
- .+..-..|++|+|++
T Consensus 115 a~ala~aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADN 135 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCC
T ss_pred HHHHHHHHhhCCceeEEECCC
Confidence 1 133334455555554
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.36 E-value=0.0071 Score=60.57 Aligned_cols=137 Identities=8% Similarity=-0.048 Sum_probs=73.3
Q ss_pred CCccccCCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCccc-ceeeeEEEecccCCCCCCCeEEEEE
Q 006570 456 TNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL-VSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
.+.|+.|....+|+. ..+++|+....... ..+..+|.++++.+....+ .++++++ .+.-++|+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~----------~~~~~~v~ 86 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD----------PATGVMVT 86 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC----------TTTCCEEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE----------CCCCEEEE
Confidence 577888999999998 46888887643221 1223567777766642222 3555432 11237899
Q ss_pred Ecc-CCCCHhH--------H----------hhccCCC--CCCCHHH-HHHH---------------------HHHHHHHh
Q 006570 535 EHI-SNGSLRD--------Y----------LTDWKKK--DMLKWPQ-RMAI---------------------IIGATRGV 571 (640)
Q Consensus 535 Ey~-~~GsL~~--------~----------l~~~~~~--~~l~~~~-~~~i---------------------~~~ia~~L 571 (640)
||+ ++.++.. . +|..... ....... ...+ +..+...+
T Consensus 87 e~i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 166 (301)
T 3dxq_A 87 RYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSAL 166 (301)
T ss_dssp ECCTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHH
T ss_pred eecCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 999 5544421 0 1111100 0011111 1111 11111111
Q ss_pred hhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 572 QFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 572 ~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
.-. .....++|+|+.+.||+ ..++.+.+.||..+...
T Consensus 167 ~~~--~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 167 AAH--PLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp HSS--CCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred Hhc--CCCceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 111 12356899999999999 56677899999987643
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.27 E-value=0.0098 Score=62.89 Aligned_cols=73 Identities=19% Similarity=0.203 Sum_probs=48.5
Q ss_pred CCccccCCccceEEEEeCC--------CcEEEEEEeecccCCChHHHHHHHHHHhcCCCccc-ceeeeEEEecccCCCCC
Q 006570 456 TNLIGEGSQGQLYKGFLTD--------GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL-VSILGHCILTYQDHPNT 526 (640)
Q Consensus 456 ~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~~~~ 526 (640)
.+.|+.|....+|+...++ +..+.+|+.... ...+.+.+|..+++.+...++ .++++.+. .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--------~ 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--------G 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--------T
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--------C
Confidence 3557778889999998653 478999987421 222566789988888743333 56665431 1
Q ss_pred CCeEEEEEEccCCCCH
Q 006570 527 GSTVFLVLEHISNGSL 542 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL 542 (640)
.+||||+++.++
T Consensus 148 ----g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 ----GRLEEYIPSRPL 159 (429)
T ss_dssp ----EEEECCCCEEEC
T ss_pred ----CEEEEEeCCccc
Confidence 389999986443
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.23 E-value=0.02 Score=60.98 Aligned_cols=73 Identities=12% Similarity=0.079 Sum_probs=45.7
Q ss_pred CccccCCccceEEEEeCC-CcEEEEEEeecccCCChHHHHHHHHHHhcCCCccc-ceeeeEEEecccCCCCCCCeEEEEE
Q 006570 457 NLIGEGSQGQLYKGFLTD-GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHL-VSILGHCILTYQDHPNTGSTVFLVL 534 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~g~~~~~~~~~~~~~~~~~lv~ 534 (640)
+.|+.|-...+|+....+ +..+++|+........ -+..+|..++..+...++ .++++++- . .+||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--------~----G~v~ 180 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--------N----GRIE 180 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--------T----EEEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--------C----eEEE
Confidence 567778888999998765 4788898875332211 122578888888864444 46665541 1 3599
Q ss_pred EccCCCCH
Q 006570 535 EHISNGSL 542 (640)
Q Consensus 535 Ey~~~GsL 542 (640)
||+++.++
T Consensus 181 e~I~G~~l 188 (458)
T 2qg7_A 181 EFMDGYAL 188 (458)
T ss_dssp ECCCSEEC
T ss_pred EeeCCccC
Confidence 99987444
No 441
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.00 E-value=0.035 Score=57.44 Aligned_cols=141 Identities=12% Similarity=0.058 Sum_probs=81.5
Q ss_pred CccccCCccceEEEEeC--------CCcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCC
Q 006570 457 NLIGEGSQGQLYKGFLT--------DGSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~ 527 (640)
+.+..|-...+|+.... +++.+.+|+.... ......+.+|.++++.+. +.-..++++++- .
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--------~- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--------E- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--------T-
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--------C-
Confidence 45666778899999864 2478999986432 224567778999888774 322356665541 1
Q ss_pred CeEEEEEEccCCCCHhHH-----------------hhccCC--CCCCC--HHHHHHHHHHHHH-----------------
Q 006570 528 STVFLVLEHISNGSLRDY-----------------LTDWKK--KDMLK--WPQRMAIIIGATR----------------- 569 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL~~~-----------------l~~~~~--~~~l~--~~~~~~i~~~ia~----------------- 569 (640)
.+||||++|.++..- +|.... ..... |.++.++..++..
T Consensus 126 ---g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l 202 (379)
T 3feg_A 126 ---GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSL 202 (379)
T ss_dssp ---EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTH
T ss_pred ---ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHH
Confidence 389999997554311 111100 11122 3444444443322
Q ss_pred --Hhhh----ccc-CCCCCeeccCCCCCceeecCC----CceEEeCCCCCcc
Q 006570 570 --GVQF----LHT-GVAPGIFGNNLKTENILLDKA----LTAKLSGYNIPLP 610 (640)
Q Consensus 570 --~L~y----LH~-~~~~~iiHrDlk~~NILl~~~----~~~kl~DfGla~~ 610 (640)
.+.+ |.. .....++|+|+.+.||+++.+ +.+.+.||..+..
T Consensus 203 ~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 203 KDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1222 211 123578999999999999876 7899999998864
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.71 E-value=0.0092 Score=61.70 Aligned_cols=73 Identities=15% Similarity=0.129 Sum_probs=42.5
Q ss_pred CccccCCccceEEEEeCC---------CcEEEEEEeecccCCChHHHHHHHHHHhcCCCcc-cceeeeEEEecccCCCCC
Q 006570 457 NLIGEGSQGQLYKGFLTD---------GSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRH-LVSILGHCILTYQDHPNT 526 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~g~~~~~~~~~~~~ 526 (640)
+.++.|....+|+....+ +..+++|+....... ..+...|.++++.+...+ +.++++.. .
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~---------~ 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF---------N 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE---------T
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec---------C
Confidence 456778888999998654 268888887543211 112467787777774333 34555432 0
Q ss_pred CCeEEEEEEccCCCCH
Q 006570 527 GSTVFLVLEHISNGSL 542 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL 542 (640)
-++||||+++.++
T Consensus 109 ---~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 ---GGRIEEWLYGDPL 121 (369)
T ss_dssp ---TEEEEECCCSEEC
T ss_pred ---CcEEEEEecCCcC
Confidence 2789999987543
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.36 E-value=0.026 Score=57.57 Aligned_cols=32 Identities=9% Similarity=0.250 Sum_probs=28.1
Q ss_pred CCeeccCCCCCceeecCCCceEEeCCCCCccc
Q 006570 580 PGIFGNNLKTENILLDKALTAKLSGYNIPLPS 611 (640)
Q Consensus 580 ~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~ 611 (640)
..++|+|+.+.||++++++.+.|.||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 57999999999999998888999999877543
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.05 E-value=0.16 Score=52.74 Aligned_cols=31 Identities=19% Similarity=0.120 Sum_probs=27.5
Q ss_pred CCeeccCCCCCceeecCC------CceEEeCCCCCcc
Q 006570 580 PGIFGNNLKTENILLDKA------LTAKLSGYNIPLP 610 (640)
Q Consensus 580 ~~iiHrDlk~~NILl~~~------~~~kl~DfGla~~ 610 (640)
..++|+|+.+.||+++++ +.+.++||..+..
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 568999999999999887 7899999988864
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=92.26 E-value=0.35 Score=50.63 Aligned_cols=73 Identities=14% Similarity=0.084 Sum_probs=46.1
Q ss_pred CccccCCccceEEEEeCC--------CcEEEEEEeecccCCChHHHHHHHHHHhcCC-CcccceeeeEEEecccCCCCCC
Q 006570 457 NLIGEGSQGQLYKGFLTD--------GSRVSVKCLKLKQRHLPQSLMQHVELLSKLR-HRHLVSILGHCILTYQDHPNTG 527 (640)
Q Consensus 457 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~~~~~~ 527 (640)
+.+..|-...+|+....+ +..+++|+....... .-+..+|.++++.+. +.-..++++.+ .
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~---------~- 144 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF---------P- 144 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE---------T-
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc---------C-
Confidence 456667788999998753 578999986543221 123457787777774 22234555432 1
Q ss_pred CeEEEEEEccCCCCH
Q 006570 528 STVFLVLEHISNGSL 542 (640)
Q Consensus 528 ~~~~lv~Ey~~~GsL 542 (640)
-++||||++|.+|
T Consensus 145 --~~~I~efI~G~~l 157 (424)
T 3mes_A 145 --EGRIEEFIDGEPL 157 (424)
T ss_dssp --TEEEEECCCSEEC
T ss_pred --CCEEEEEeCCccC
Confidence 2789999998654
No 446
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=81.57 E-value=0.15 Score=34.24 Aligned_cols=26 Identities=23% Similarity=0.474 Sum_probs=10.4
Q ss_pred eeEeeeehhhhhhhhhheeeeeecccc
Q 006570 367 LGIIGGVVGFVVVFGLLVLVVIRRSKT 393 (640)
Q Consensus 367 i~ii~~~~~~v~l~~~i~~~~~rr~~~ 393 (640)
.++++|+++++ ++++.+++++||++.
T Consensus 15 ~gVVgGv~~~~-ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 15 TGMVGALLLLL-VVALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHTTTC
T ss_pred eehhHHHHHHH-HHHHHHHHHhhhhHh
Confidence 34444433333 333344444444443
No 447
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=80.88 E-value=0.083 Score=34.32 Aligned_cols=29 Identities=21% Similarity=0.193 Sum_probs=16.7
Q ss_pred ccceeeeEeeeehhhhhhhhhheeeeeec
Q 006570 362 DVGLILGIIGGVVGFVVVFGLLVLVVIRR 390 (640)
Q Consensus 362 ~~~~ii~ii~~~~~~v~l~~~i~~~~~rr 390 (640)
+.+.+.++++++++.+++++.++++++||
T Consensus 9 s~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 9 TGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 44556667666666555555555555444
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=80.74 E-value=0.33 Score=51.60 Aligned_cols=64 Identities=13% Similarity=0.029 Sum_probs=20.2
Q ss_pred CCCccccCCccceEEEEeCC-CcEEEE------EEeeccc--CCChHHHHHHHHHHhcCCCcccceeeeEEEeccc
Q 006570 455 PTNLIGEGSQGQLYKGFLTD-GSRVSV------KCLKLKQ--RHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQ 521 (640)
Q Consensus 455 ~~~~ig~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 521 (640)
..+.+| ||.||+|.+.. ..+||| |..+... ......+.+|..+++..+|||+++.+++....+.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~~~~ 218 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHTFR 218 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEECCS
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEeecC
Confidence 345666 99999999754 357888 7665322 2223568889999999999999999998765443
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=78.19 E-value=0.13 Score=34.39 Aligned_cols=25 Identities=40% Similarity=0.740 Sum_probs=10.0
Q ss_pred eEeeeehhhhhhhhhheeeeeecccc
Q 006570 368 GIIGGVVGFVVVFGLLVLVVIRRSKT 393 (640)
Q Consensus 368 ~ii~~~~~~v~l~~~i~~~~~rr~~~ 393 (640)
++++|+++++ ++++..++++||++.
T Consensus 15 gVVgGv~~v~-ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 15 GVIGGLFILV-IVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHTTCS
T ss_pred eehHHHHHHH-HHHHHHHHHhhhhhh
Confidence 3344333333 333344444444443
No 450
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=76.34 E-value=2.8 Score=39.14 Aligned_cols=93 Identities=10% Similarity=-0.062 Sum_probs=60.1
Q ss_pred CCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCccc----cCCC
Q 006570 540 GSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPS----KVRN 615 (640)
Q Consensus 540 GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~----~~~~ 615 (640)
-||.+.|.. ...++++.+++.++.|.+.+|.-+-.. ..+ ..+=+.|..|++..+|.+...+ ..+... .+..
T Consensus 33 vSL~eIL~~--~~~PlsEEqaWALc~Qc~~~L~~~~~~-~~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~~~~~~~~~pe 107 (229)
T 2yle_A 33 LSLEEILRL--YNQPINEEQAWAVCYQCCGSLRAAARR-RQP-RHRVRSAAQIRVWRDGAVTLAP-AADDAGEPPPVAGK 107 (229)
T ss_dssp EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCCSGGGEEEETTSCEEECC-C------------C
T ss_pred ccHHHHHHH--cCCCcCHHHHHHHHHHHHHHHHhhhhc-ccC-CceecCCcceEEecCCceeccc-ccccccccCCCChh
Confidence 389999975 356899999999999999998766110 001 1233457899999999998875 222110 0000
Q ss_pred CccCC-CCccceehhhHHHHHHh
Q 006570 616 TLSFH-TDRSSLYKIILIICVIT 637 (640)
Q Consensus 616 ~~~~~-~~~~DvwS~Gvvl~ell 637 (640)
..... +.+.=|||+|+++|.-+
T Consensus 108 ~~~~~~te~~~IysLG~tLY~AL 130 (229)
T 2yle_A 108 LGYSQCMETEVIESLGIIIYKAL 130 (229)
T ss_dssp CSSSSSCHHHHHHHHHHHHHHHH
T ss_pred hccccchHHHHHHHHHHHHHHHh
Confidence 00112 67888999999999754
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=72.96 E-value=0.16 Score=33.96 Aligned_cols=27 Identities=30% Similarity=0.608 Sum_probs=12.0
Q ss_pred eeeEeeeehhhhhhhhhheeeeeecccc
Q 006570 366 ILGIIGGVVGFVVVFGLLVLVVIRRSKT 393 (640)
Q Consensus 366 ii~ii~~~~~~v~l~~~i~~~~~rr~~~ 393 (640)
+++.++| +.+++++++++++++|||+.
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHCS
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehhhh
Confidence 3334444 33444444444445455443
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=70.88 E-value=10 Score=35.29 Aligned_cols=74 Identities=14% Similarity=0.026 Sum_probs=54.8
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHHHHHHHHHHHHhh-hcccCCCCCeeccCCCCCceeecCCCceEEeCC
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQRMAIIIGATRGVQ-FLHTGVAPGIFGNNLKTENILLDKALTAKLSGY 605 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~-yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~Df 605 (640)
.+.+.+.|+--+++-=+..++ .++...+++++..++.-.. +++. -+|--+.|+||++|.++.+++.=.
T Consensus 60 eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hR 128 (219)
T 4ano_A 60 EDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHV 128 (219)
T ss_dssp SSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCC
T ss_pred CCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEc
Confidence 345666666554433333343 3678999999999998877 6664 467789999999999999999999
Q ss_pred CCCccc
Q 006570 606 NIPLPS 611 (640)
Q Consensus 606 Gla~~~ 611 (640)
|+-..+
T Consensus 129 Gi~~~l 134 (219)
T 4ano_A 129 GVKESL 134 (219)
T ss_dssp EETTTB
T ss_pred CCcccC
Confidence 986554
No 453
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=63.79 E-value=20 Score=33.25 Aligned_cols=53 Identities=4% Similarity=0.026 Sum_probs=44.6
Q ss_pred CCHHHHHHHHHHHHHHhhhcccCCCCCeeccCCCCCceeecCCCceEEeCCCCCcccc
Q 006570 555 LKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKALTAKLSGYNIPLPSK 612 (640)
Q Consensus 555 l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk~~NILl~~~~~~kl~DfGla~~~~ 612 (640)
++...+++++..++.-..+++. =+|--+.|+||++|.++.+++.=.|+...+.
T Consensus 78 ~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~f~~~~~p~i~~RGik~~l~ 130 (215)
T 4ann_A 78 FTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELFFTRDGLPIAKTRGLQNVVD 130 (215)
T ss_dssp SCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEEECTTSCEEESCCEETTTBS
T ss_pred cCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEEEcCCCCEEEEEccCccCCC
Confidence 6788999999999988877764 3677899999999999999999998855443
No 454
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=52.13 E-value=6.9 Score=40.31 Aligned_cols=30 Identities=20% Similarity=0.184 Sum_probs=25.3
Q ss_pred CeeccCCCCCceee------cCCCceEEeCCCCCcc
Q 006570 581 GIFGNNLKTENILL------DKALTAKLSGYNIPLP 610 (640)
Q Consensus 581 ~iiHrDlk~~NILl------~~~~~~kl~DfGla~~ 610 (640)
.++|+|+.+.||++ +++..++++||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4557799999998864
No 455
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=35.98 E-value=1.1 Score=28.25 Aligned_cols=18 Identities=22% Similarity=0.434 Sum_probs=8.3
Q ss_pred hhhhhhhhhheeeeeecc
Q 006570 374 VGFVVVFGLLVLVVIRRS 391 (640)
Q Consensus 374 ~~~v~l~~~i~~~~~rr~ 391 (640)
+.+++++++.+.+++|||
T Consensus 17 lll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 17 VLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHTTTTTHHHHHC
T ss_pred HHHHHHHHHHhheEEeec
Confidence 334444444444444554
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=35.85 E-value=2.5e+02 Score=27.82 Aligned_cols=139 Identities=11% Similarity=0.026 Sum_probs=69.8
Q ss_pred CCccceEEEEeCCCcEEEEEEeecccCCChHHHHHHHHHHhcCCCcccceeeeEE----------EecccCCC-----CC
Q 006570 462 GSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHC----------ILTYQDHP-----NT 526 (640)
Q Consensus 462 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~----------~~~~~~~~-----~~ 526 (640)
++.+.||.+.. ++..|.||-.. ....+-+..++...-.+.-|+.- ++.+. .....+.+ ..
T Consensus 79 ~Gstgvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~R-iv~~~~~E~~e~~~~L~~~~~~~~~l~~l~ 153 (342)
T 1cja_A 79 KGTEGLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVR-VVSSNSEEGTNMLECLAAIDKSFRVITTLA 153 (342)
T ss_dssp STTSCEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEE-EEESSSHHHHHHHHHHHHHCSSSCHHHHHT
T ss_pred CCCCCeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCee-EEeeCcHHHHHHHHHHHHhhhhhHHHHHhh
Confidence 44566777766 57789999442 22234445555554455555532 22111 00000000 01
Q ss_pred CCeEEEEEEccCCCCHhHHhhccCCCCCCCHHHH--HHHHHHH--HHHhhhcccCC-CCCeec-cCCCCCceeecCCCc-
Q 006570 527 GSTVFLVLEHISNGSLRDYLTDWKKKDMLKWPQR--MAIIIGA--TRGVQFLHTGV-APGIFG-NNLKTENILLDKALT- 599 (640)
Q Consensus 527 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~--~~i~~~i--a~~L~yLH~~~-~~~iiH-rDlk~~NILl~~~~~- 599 (640)
....+++|||.+|..|.+.-+ ..|... .+.+.++ +-++.++..+. +.+.+. .---+.|||++++..
T Consensus 154 ~~~~~l~meyv~G~~L~e~~~-------~~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~ 226 (342)
T 1cja_A 154 NQANILLMELVRGITLNKLTT-------TSAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGAT 226 (342)
T ss_dssp TCSEEEEEECCCEEESTTCCS-------SSHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTC
T ss_pred cccceehhhhcCCCccccchh-------hhhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCe
Confidence 224679999998755544211 111111 1222222 23444444432 333322 225688999987654
Q ss_pred eEEeCCCCCcccc
Q 006570 600 AKLSGYNIPLPSK 612 (640)
Q Consensus 600 ~kl~DfGla~~~~ 612 (640)
+.++|-+.+..-.
T Consensus 227 ~~~IDhn~af~~~ 239 (342)
T 1cja_A 227 VVPIDSKIIPLDA 239 (342)
T ss_dssp EEECSCCCCCCCS
T ss_pred EEEEcCCccccCC
Confidence 8899999996644
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=35.43 E-value=46 Score=26.46 Aligned_cols=37 Identities=8% Similarity=0.054 Sum_probs=15.2
Q ss_pred hhcCCCCCcEeecccCcCcCCCCccccCCCCCCEEEcc
Q 006570 119 ILTKLSNLKVLSLVSLGLWGPLPSKINRFWSLEVLNIS 156 (640)
Q Consensus 119 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls 156 (640)
+|.++++|+.+.|..+ ++..-..+|.++.+|+.+.+.
T Consensus 15 aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 15 LFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp TTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 4444445544444332 222222344444444444443
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=35.21 E-value=71 Score=25.31 Aligned_cols=41 Identities=12% Similarity=0.078 Sum_probs=20.4
Q ss_pred CCccccCCCCccEEEccCCcccCcCCccccCCCCCcEEEccC
Q 006570 232 IPSGLKNFDQLKQFDISSNNFVGPIQSFLFSLPSILYLNLAG 273 (640)
Q Consensus 232 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 273 (640)
-..+|.++.+|+.+.|-.+ ++..-...|.++.+|+.+.+.+
T Consensus 12 ~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 12 DKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3445555556665555543 3323344455555555555543
No 459
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=22.93 E-value=8.1 Score=27.94 Aligned_cols=17 Identities=35% Similarity=0.925 Sum_probs=9.4
Q ss_pred Eeeeehhhhhhhhhhee
Q 006570 369 IIGGVVGFVVVFGLLVL 385 (640)
Q Consensus 369 ii~~~~~~v~l~~~i~~ 385 (640)
+++|+++++++.++.+|
T Consensus 13 vlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 13 VLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHH
Confidence 44555555555565555
Done!