Query 006573
Match_columns 640
No_of_seqs 507 out of 4528
Neff 9.7
Searched_HMMs 46136
Date Thu Mar 28 11:22:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006573.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006573hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03192 Voltage-dependent pot 100.0 5.2E-93 1.1E-97 808.8 56.7 606 30-640 25-667 (823)
2 KOG0498 K+-channel ERG and rel 100.0 4.4E-84 9.6E-89 686.7 47.3 549 46-628 59-642 (727)
3 KOG0501 K+-channel KCNQ [Inorg 100.0 9.5E-66 2.1E-70 509.5 26.7 459 31-500 187-670 (971)
4 KOG0500 Cyclic nucleotide-gate 100.0 1.1E-63 2.3E-68 490.4 32.8 419 71-500 3-435 (536)
5 KOG0499 Cyclic nucleotide-gate 100.0 4.9E-58 1.1E-62 456.2 31.5 436 51-505 214-658 (815)
6 KOG3713 Voltage-gated K+ chann 100.0 6.3E-33 1.4E-37 276.7 13.8 240 47-319 173-446 (477)
7 KOG1545 Voltage-gated shaker-l 100.0 1.8E-34 4E-39 272.1 0.3 262 17-315 146-458 (507)
8 KOG4390 Voltage-gated A-type K 99.9 8.2E-26 1.8E-30 215.6 -3.8 255 23-313 145-419 (632)
9 KOG1419 Voltage-gated K+ chann 99.9 5.8E-24 1.3E-28 212.4 7.1 270 48-341 77-353 (654)
10 KOG4412 26S proteasome regulat 99.7 8.9E-18 1.9E-22 145.0 7.6 111 519-638 28-149 (226)
11 PRK09392 ftrB transcriptional 99.7 1E-16 2.2E-21 156.7 15.9 150 375-524 6-155 (236)
12 KOG0614 cGMP-dependent protein 99.7 2.1E-16 4.6E-21 157.9 8.3 257 372-640 268-537 (732)
13 PRK11753 DNA-binding transcrip 99.6 4.7E-15 1E-19 142.4 16.8 139 385-523 6-146 (211)
14 PRK10402 DNA-binding transcrip 99.6 1.6E-14 3.4E-19 139.9 12.5 132 393-524 25-157 (226)
15 KOG1420 Ca2+-activated K+ chan 99.6 4.3E-16 9.2E-21 156.4 1.4 229 56-314 118-352 (1103)
16 KOG4412 26S proteasome regulat 99.6 3.2E-15 7E-20 129.3 6.3 116 516-640 59-184 (226)
17 COG2905 Predicted signal-trans 99.6 5.6E-14 1.2E-18 143.0 14.8 176 374-554 5-181 (610)
18 cd00038 CAP_ED effector domain 99.6 5.5E-14 1.2E-18 120.4 12.5 113 383-495 1-114 (115)
19 PLN03192 Voltage-dependent pot 99.6 6.6E-13 1.4E-17 152.4 25.2 109 524-632 553-693 (823)
20 PF00520 Ion_trans: Ion transp 99.5 8.3E-15 1.8E-19 139.3 7.8 188 98-299 1-200 (200)
21 PRK11161 fumarate/nitrate redu 99.5 1E-13 2.2E-18 135.4 14.8 146 378-524 15-162 (235)
22 COG0664 Crp cAMP-binding prote 99.5 1.4E-13 3E-18 132.5 14.4 146 379-524 3-149 (214)
23 KOG1113 cAMP-dependent protein 99.5 4.2E-14 9.2E-19 135.8 8.6 184 374-566 120-316 (368)
24 PF00027 cNMP_binding: Cyclic 99.5 1.9E-13 4.1E-18 111.9 10.6 89 402-490 2-91 (91)
25 KOG0614 cGMP-dependent protein 99.5 2.1E-14 4.5E-19 143.9 3.8 128 370-501 148-275 (732)
26 smart00100 cNMP Cyclic nucleot 99.4 1.3E-12 2.9E-17 112.5 13.3 114 383-496 1-117 (120)
27 TIGR03697 NtcA_cyano global ni 99.4 7.7E-13 1.7E-17 125.1 12.6 117 407-523 1-120 (193)
28 PRK09391 fixK transcriptional 99.4 1.3E-12 2.8E-17 126.7 13.0 128 394-524 33-161 (230)
29 PRK13918 CRP/FNR family transc 99.3 9.4E-12 2E-16 118.6 12.5 119 398-523 5-126 (202)
30 PHA02791 ankyrin-like protein; 99.3 8.7E-13 1.9E-17 130.5 5.4 103 527-638 92-204 (284)
31 KOG0509 Ankyrin repeat and DHH 99.3 1.1E-12 2.5E-17 135.5 6.3 111 521-640 70-190 (600)
32 PF07885 Ion_trans_2: Ion chan 99.3 7.7E-12 1.7E-16 98.8 9.3 77 208-304 2-78 (79)
33 KOG0509 Ankyrin repeat and DHH 99.3 1.5E-12 3.2E-17 134.7 4.9 99 533-640 48-157 (600)
34 PLN02868 acyl-CoA thioesterase 99.3 2.3E-11 5E-16 128.3 13.2 117 375-494 7-124 (413)
35 PHA02884 ankyrin repeat protei 99.3 2.4E-12 5.2E-17 127.3 4.8 99 530-637 34-146 (300)
36 PHA02791 ankyrin-like protein; 99.2 7.8E-12 1.7E-16 123.7 4.6 100 530-640 62-172 (284)
37 PF13857 Ank_5: Ankyrin repeat 99.2 6.6E-12 1.4E-16 91.6 1.5 55 548-635 1-56 (56)
38 PHA02874 ankyrin repeat protei 99.2 3.4E-11 7.5E-16 128.9 6.5 101 528-637 34-166 (434)
39 PHA02859 ankyrin repeat protei 99.2 3E-11 6.5E-16 115.1 5.2 99 530-635 88-199 (209)
40 PHA02946 ankyin-like protein; 99.1 4.7E-11 1E-15 127.0 6.6 113 525-637 68-217 (446)
41 PHA02875 ankyrin repeat protei 99.1 4.5E-11 9.8E-16 127.3 6.2 99 529-636 102-210 (413)
42 PHA02917 ankyrin-like protein; 99.1 3.2E-11 7E-16 133.4 5.1 100 532-640 106-241 (661)
43 PF12796 Ank_2: Ankyrin repeat 99.1 4.6E-11 9.9E-16 97.2 4.6 62 531-625 28-89 (89)
44 PHA02741 hypothetical protein; 99.1 3.9E-11 8.4E-16 110.4 4.4 104 526-638 18-142 (169)
45 KOG1113 cAMP-dependent protein 99.1 1.1E-10 2.5E-15 112.5 7.4 118 371-491 235-352 (368)
46 PHA02859 ankyrin repeat protei 99.1 5.8E-11 1.3E-15 113.1 5.3 103 527-635 49-165 (209)
47 KOG0512 Fetal globin-inducing 99.1 8E-11 1.7E-15 101.5 5.4 93 536-637 70-172 (228)
48 PHA02878 ankyrin repeat protei 99.1 4.8E-11 1E-15 129.4 5.1 99 527-636 199-308 (477)
49 PHA02716 CPXV016; CPX019; EVM0 99.1 4E-11 8.6E-16 132.0 4.3 113 524-636 207-360 (764)
50 PHA02875 ankyrin repeat protei 99.1 8.4E-11 1.8E-15 125.2 6.1 101 530-639 69-179 (413)
51 PHA02874 ankyrin repeat protei 99.1 7.8E-11 1.7E-15 126.1 4.9 100 528-636 123-231 (434)
52 PHA02743 Viral ankyrin protein 99.1 1.6E-10 3.5E-15 105.8 6.3 98 524-630 52-163 (166)
53 KOG0510 Ankyrin repeat protein 99.1 1.4E-10 3.1E-15 122.6 6.5 112 520-640 264-389 (929)
54 PHA02795 ankyrin-like protein; 99.1 9.5E-11 2E-15 120.7 4.0 100 531-639 151-265 (437)
55 KOG0508 Ankyrin repeat protein 99.1 8.5E-11 1.8E-15 116.7 3.5 107 524-640 112-227 (615)
56 PHA02878 ankyrin repeat protei 99.0 2E-10 4.2E-15 124.6 5.9 100 529-637 168-278 (477)
57 PHA02743 Viral ankyrin protein 99.0 1E-10 2.2E-15 107.1 3.1 100 530-638 21-138 (166)
58 KOG0195 Integrin-linked kinase 99.0 1.6E-10 3.5E-15 107.5 4.0 120 507-635 12-140 (448)
59 PHA03100 ankyrin repeat protei 99.0 1.7E-10 3.7E-15 125.5 4.8 102 528-638 175-293 (480)
60 KOG4214 Myotrophin and similar 99.0 2.3E-10 5E-15 87.9 3.9 72 528-632 33-104 (117)
61 KOG0508 Ankyrin repeat protein 99.0 2.6E-10 5.7E-15 113.3 5.4 101 527-636 82-191 (615)
62 KOG0514 Ankyrin repeat protein 99.0 1.8E-10 3.9E-15 110.9 3.8 80 528-640 339-419 (452)
63 PHA02795 ankyrin-like protein; 99.0 1.5E-10 3.2E-15 119.2 3.4 102 528-640 115-233 (437)
64 KOG4177 Ankyrin [Cell wall/mem 99.0 1.9E-10 4E-15 129.3 4.2 103 529-640 507-618 (1143)
65 PHA02730 ankyrin-like protein; 99.0 9.2E-10 2E-14 119.0 8.4 110 527-636 376-504 (672)
66 PRK10537 voltage-gated potassi 99.0 8.4E-09 1.8E-13 106.5 15.0 56 248-303 166-221 (393)
67 PHA03100 ankyrin repeat protei 99.0 4.9E-10 1.1E-14 122.0 6.2 91 529-628 106-209 (480)
68 PHA03095 ankyrin-like protein; 99.0 4.3E-10 9.3E-15 122.1 5.0 105 527-640 185-302 (471)
69 PHA02989 ankyrin repeat protei 99.0 4.1E-10 8.9E-15 122.5 4.5 108 529-639 181-300 (494)
70 PHA02917 ankyrin-like protein; 99.0 4.4E-10 9.4E-15 124.5 4.7 106 526-636 29-144 (661)
71 KOG0514 Ankyrin repeat protein 98.9 1E-09 2.2E-14 105.8 5.9 109 525-640 264-385 (452)
72 PHA03095 ankyrin-like protein; 98.9 5.9E-10 1.3E-14 121.0 5.0 99 528-635 46-159 (471)
73 PHA02716 CPXV016; CPX019; EVM0 98.9 7.5E-10 1.6E-14 122.1 5.7 100 528-636 176-325 (764)
74 KOG0502 Integral membrane anky 98.9 5.3E-10 1.1E-14 100.2 3.5 103 521-632 152-263 (296)
75 PHA02798 ankyrin-like protein; 98.9 9.2E-10 2E-14 119.6 5.4 88 542-635 89-189 (489)
76 KOG0510 Ankyrin repeat protein 98.9 1.5E-09 3.2E-14 115.1 5.3 116 524-639 149-317 (929)
77 PHA02876 ankyrin repeat protei 98.9 2E-09 4.3E-14 122.1 6.0 103 526-637 372-485 (682)
78 PHA02798 ankyrin-like protein; 98.9 2.6E-09 5.7E-14 116.0 6.6 95 539-637 48-154 (489)
79 PHA02946 ankyin-like protein; 98.9 1.6E-09 3.4E-14 115.5 4.7 102 528-638 140-252 (446)
80 PHA02736 Viral ankyrin protein 98.9 3.2E-09 6.9E-14 96.2 5.8 88 526-622 52-153 (154)
81 PHA02876 ankyrin repeat protei 98.8 3.4E-09 7.3E-14 120.2 6.8 113 525-637 174-316 (682)
82 PHA02792 ankyrin-like protein; 98.8 3.1E-09 6.7E-14 113.8 6.0 99 533-637 343-452 (631)
83 PHA02792 ankyrin-like protein; 98.8 7.7E-09 1.7E-13 110.8 5.8 95 536-639 79-226 (631)
84 KOG0505 Myosin phosphatase, re 98.8 6.7E-09 1.5E-13 105.6 4.9 98 531-637 75-240 (527)
85 KOG0512 Fetal globin-inducing 98.8 5.5E-09 1.2E-13 90.3 3.4 60 577-636 69-138 (228)
86 PF13637 Ank_4: Ankyrin repeat 98.7 6E-09 1.3E-13 75.5 2.8 53 530-615 2-54 (54)
87 KOG4214 Myotrophin and similar 98.7 3.8E-09 8.2E-14 81.3 1.7 74 533-640 6-79 (117)
88 PHA02730 ankyrin-like protein; 98.7 9.3E-09 2E-13 111.3 5.2 102 526-636 38-163 (672)
89 KOG4177 Ankyrin [Cell wall/mem 98.7 1.1E-08 2.4E-13 115.3 4.4 103 529-640 474-585 (1143)
90 PTZ00322 6-phosphofructo-2-kin 98.7 1.6E-08 3.4E-13 113.0 5.5 95 532-635 85-195 (664)
91 PHA02989 ankyrin repeat protei 98.7 1.5E-08 3.2E-13 110.3 4.1 98 528-632 107-222 (494)
92 KOG0195 Integrin-linked kinase 98.6 5E-09 1.1E-13 97.7 -0.3 91 536-635 7-107 (448)
93 PF13606 Ank_3: Ankyrin repeat 98.6 3.1E-08 6.8E-13 61.3 3.1 24 600-623 7-30 (30)
94 KOG2968 Predicted esterase of 98.6 4.2E-08 9E-13 105.0 5.5 114 390-503 499-613 (1158)
95 PF00023 Ank: Ankyrin repeat H 98.6 4.5E-08 9.7E-13 62.6 3.5 27 600-626 7-33 (33)
96 KOG0502 Integral membrane anky 98.6 5.3E-08 1.1E-12 87.6 5.2 98 531-639 131-237 (296)
97 cd00204 ANK ankyrin repeats; 98.6 6.3E-08 1.4E-12 83.8 4.5 100 528-636 6-114 (126)
98 PF13637 Ank_4: Ankyrin repeat 98.6 2E-08 4.4E-13 72.7 1.1 41 600-640 6-46 (54)
99 KOG0507 CASK-interacting adapt 98.5 1.7E-07 3.8E-12 99.0 8.0 114 517-630 70-224 (854)
100 COG0666 Arp FOG: Ankyrin repea 98.5 1.1E-07 2.3E-12 92.1 6.0 108 529-640 73-192 (235)
101 TIGR00870 trp transient-recept 98.5 4.2E-08 9.1E-13 112.3 3.3 104 526-639 49-186 (743)
102 PHA02741 hypothetical protein; 98.5 1.3E-07 2.9E-12 86.9 5.4 94 524-626 55-163 (169)
103 KOG3684 Ca2+-activated K+ chan 98.4 2.7E-06 5.8E-11 85.4 13.2 88 247-342 284-371 (489)
104 KOG0515 p53-interacting protei 98.4 1.5E-07 3.3E-12 94.9 3.2 81 536-625 557-646 (752)
105 PF12796 Ank_2: Ankyrin repeat 98.4 1.9E-07 4.1E-12 75.7 2.2 63 576-638 2-69 (89)
106 PHA02884 ankyrin repeat protei 98.3 4.3E-07 9.3E-12 90.1 4.8 80 528-616 69-158 (300)
107 PF08412 Ion_trans_N: Ion tran 98.3 6E-07 1.3E-11 68.4 4.4 46 47-92 29-74 (77)
108 KOG2302 T-type voltage-gated C 98.3 1.5E-05 3.3E-10 86.3 16.3 121 53-186 1103-1241(1956)
109 TIGR00870 trp transient-recept 98.3 2.6E-07 5.7E-12 105.8 3.4 104 528-640 127-269 (743)
110 KOG0515 p53-interacting protei 98.3 3.4E-07 7.3E-12 92.5 3.7 79 528-615 582-672 (752)
111 KOG1710 MYND Zn-finger and ank 98.3 4.2E-07 9E-12 85.2 3.6 77 522-631 38-115 (396)
112 KOG0506 Glutaminase (contains 98.3 2.9E-07 6.3E-12 91.9 2.3 80 528-640 505-585 (622)
113 KOG0507 CASK-interacting adapt 98.3 5.6E-07 1.2E-11 95.2 3.7 101 526-635 46-155 (854)
114 KOG0505 Myosin phosphatase, re 98.2 9E-07 2E-11 90.4 4.3 90 513-635 176-271 (527)
115 PHA02736 Viral ankyrin protein 98.2 1.5E-06 3.2E-11 78.6 5.2 60 528-596 91-151 (154)
116 PF01007 IRK: Inward rectifier 98.2 8.7E-06 1.9E-10 82.1 10.7 98 203-308 40-144 (336)
117 KOG3676 Ca2+-permeable cation 98.1 2.1E-06 4.6E-11 92.1 4.3 92 527-633 182-278 (782)
118 KOG2968 Predicted esterase of 98.1 2.4E-05 5.1E-10 84.6 11.0 139 406-547 393-542 (1158)
119 KOG4404 Tandem pore domain K+ 97.9 7.2E-05 1.6E-09 72.0 10.5 60 250-309 186-253 (350)
120 KOG4369 RTK signaling protein 97.9 1.5E-05 3.3E-10 87.5 5.1 111 526-636 754-900 (2131)
121 PF13857 Ank_5: Ankyrin repeat 97.9 5.3E-06 1.1E-10 60.3 1.1 43 524-566 11-53 (56)
122 KOG0818 GTPase-activating prot 97.8 1.2E-05 2.6E-10 81.0 3.2 76 532-640 136-212 (669)
123 cd00204 ANK ankyrin repeats; 97.8 1.7E-05 3.6E-10 68.4 3.4 74 557-639 2-84 (126)
124 KOG0783 Uncharacterized conser 97.8 3E-05 6.5E-10 82.9 5.6 72 528-632 51-123 (1267)
125 KOG1418 Tandem pore domain K+ 97.7 3.5E-05 7.6E-10 82.6 5.2 57 250-306 115-171 (433)
126 PLN03223 Polycystin cation cha 97.7 0.0017 3.7E-08 74.0 17.9 120 168-307 1299-1426(1634)
127 KOG1710 MYND Zn-finger and ank 97.7 9.3E-05 2E-09 69.8 6.8 55 528-615 78-132 (396)
128 KOG3193 K+ channel subunit [In 97.7 7.8E-05 1.7E-09 76.1 6.2 55 250-304 217-271 (1087)
129 PTZ00322 6-phosphofructo-2-kin 97.6 2.7E-05 5.8E-10 87.3 2.8 65 576-640 87-160 (664)
130 KOG4369 RTK signaling protein 97.6 0.00015 3.2E-09 80.1 7.9 107 509-624 804-921 (2131)
131 PRK11832 putative DNA-binding 97.6 0.0019 4.1E-08 59.8 13.9 108 391-502 14-122 (207)
132 KOG0511 Ankyrin repeat protein 97.5 6.3E-05 1.4E-09 73.5 3.4 71 532-635 39-109 (516)
133 COG0666 Arp FOG: Ankyrin repea 97.5 9E-05 2E-09 71.4 4.6 87 523-618 100-203 (235)
134 PF04831 Popeye: Popeye protei 97.5 0.0038 8.3E-08 53.9 13.0 112 386-501 14-132 (153)
135 KOG3542 cAMP-regulated guanine 97.4 0.00052 1.1E-08 71.9 8.6 116 369-488 274-391 (1283)
136 KOG3827 Inward rectifier K+ ch 97.3 0.0016 3.4E-08 64.7 10.4 100 201-308 66-172 (400)
137 KOG0782 Predicted diacylglycer 97.3 0.00011 2.4E-09 75.2 1.9 74 530-636 900-975 (1004)
138 KOG0522 Ankyrin repeat protein 97.2 0.00022 4.8E-09 73.2 3.3 75 530-637 21-97 (560)
139 KOG3676 Ca2+-permeable cation 97.2 0.00022 4.9E-09 77.0 3.2 79 530-617 241-330 (782)
140 KOG4404 Tandem pore domain K+ 97.1 0.00013 2.8E-09 70.3 0.7 51 250-300 80-130 (350)
141 KOG0521 Putative GTPase activa 97.0 0.00032 7E-09 78.4 2.4 76 529-637 656-731 (785)
142 KOG0705 GTPase-activating prot 97.0 0.00034 7.3E-09 72.2 2.2 79 533-620 628-719 (749)
143 KOG2301 Voltage-gated Ca2+ cha 96.8 0.002 4.4E-08 76.9 6.3 71 67-152 1159-1231(1592)
144 KOG2301 Voltage-gated Ca2+ cha 96.8 0.007 1.5E-07 72.4 10.6 141 96-266 475-618 (1592)
145 KOG0783 Uncharacterized conser 96.7 0.00033 7.1E-09 75.3 -0.6 53 555-640 45-98 (1267)
146 PF00023 Ank: Ankyrin repeat H 96.6 0.0011 2.5E-08 42.0 1.5 32 529-560 2-33 (33)
147 KOG0705 GTPase-activating prot 96.4 0.0037 8.1E-08 64.8 4.5 61 525-594 657-717 (749)
148 PF13606 Ank_3: Ankyrin repeat 96.3 0.0019 4.2E-08 39.8 1.3 29 529-557 2-30 (30)
149 KOG0522 Ankyrin repeat protein 96.3 0.0047 1E-07 63.8 4.6 67 518-617 44-110 (560)
150 KOG0506 Glutaminase (contains 96.1 0.006 1.3E-07 61.9 4.0 44 523-566 533-577 (622)
151 smart00248 ANK ankyrin repeats 95.9 0.0093 2E-07 35.6 3.2 25 598-622 5-29 (30)
152 KOG2505 Ankyrin repeat protein 95.7 0.012 2.5E-07 60.3 4.4 35 599-633 434-468 (591)
153 KOG3614 Ca2+/Mg2+-permeable ca 95.7 0.79 1.7E-05 53.4 18.8 90 59-156 788-877 (1381)
154 KOG0818 GTPase-activating prot 95.5 0.029 6.2E-07 57.4 6.4 39 528-566 166-204 (669)
155 KOG3609 Receptor-activated Ca2 95.5 0.014 3.1E-07 63.9 4.5 89 535-623 31-159 (822)
156 KOG3542 cAMP-regulated guanine 95.5 0.018 3.8E-07 60.9 5.0 105 362-478 23-127 (1283)
157 KOG1418 Tandem pore domain K+ 95.3 0.0066 1.4E-07 64.9 1.3 48 249-296 241-296 (433)
158 KOG2302 T-type voltage-gated C 94.1 0.59 1.3E-05 52.2 12.0 70 66-151 1442-1514(1956)
159 KOG2384 Major histocompatibili 92.9 0.14 2.9E-06 46.1 4.1 57 552-617 2-68 (223)
160 PF08016 PKD_channel: Polycyst 92.4 1.4 3E-05 47.1 11.8 53 169-223 305-357 (425)
161 PF00520 Ion_trans: Ion transp 92.1 1.7 3.7E-05 40.3 11.0 24 200-223 99-122 (200)
162 KOG0782 Predicted diacylglycer 91.6 0.05 1.1E-06 56.5 -0.2 39 599-637 903-943 (1004)
163 KOG0520 Uncharacterized conser 91.4 0.11 2.3E-06 58.7 2.0 94 528-623 573-669 (975)
164 PF00060 Lig_chan: Ligand-gate 88.9 0.63 1.4E-05 41.3 4.6 60 246-306 40-99 (148)
165 KOG3599 Ca2+-modulated nonsele 88.5 12 0.00027 42.7 15.2 25 169-193 562-586 (798)
166 KOG0520 Uncharacterized conser 88.0 0.46 1E-05 53.8 3.7 72 537-617 615-702 (975)
167 KOG0521 Putative GTPase activa 87.6 0.29 6.3E-06 55.4 1.9 45 595-639 656-700 (785)
168 KOG0511 Ankyrin repeat protein 85.6 0.39 8.5E-06 47.8 1.4 42 599-640 40-81 (516)
169 KOG0498 K+-channel ERG and rel 85.5 39 0.00086 38.1 16.8 44 359-402 371-419 (727)
170 KOG3609 Receptor-activated Ca2 82.8 14 0.00029 41.6 11.6 18 136-153 411-429 (822)
171 PF07883 Cupin_2: Cupin domain 79.8 11 0.00024 28.1 7.3 67 402-476 3-70 (71)
172 KOG4440 NMDA selective glutama 79.2 5 0.00011 43.0 6.5 95 206-305 574-668 (993)
173 COG4709 Predicted membrane pro 77.9 12 0.00026 34.0 7.6 76 315-392 5-83 (195)
174 PF06128 Shigella_OspC: Shigel 77.9 3.7 8E-05 38.3 4.5 50 539-621 227-280 (284)
175 KOG2505 Ankyrin repeat protein 77.1 1.1 2.3E-05 46.6 1.0 38 530-567 431-468 (591)
176 PF08006 DUF1700: Protein of u 74.0 17 0.00038 33.4 8.2 58 314-373 4-64 (181)
177 KOG2384 Major histocompatibili 69.1 2.7 5.9E-05 38.1 1.5 54 531-593 14-68 (223)
178 TIGR03037 anthran_nbaC 3-hydro 65.9 19 0.00042 32.0 6.2 62 411-479 43-104 (159)
179 PLN03223 Polycystin cation cha 65.8 84 0.0018 37.8 12.6 61 251-311 1358-1426(1634)
180 KOG2378 cAMP-regulated guanine 65.7 11 0.00023 39.1 5.0 45 446-490 1-46 (573)
181 COG3718 IolB Uncharacterized e 63.1 21 0.00046 33.6 6.0 67 399-478 31-110 (270)
182 PF05899 Cupin_3: Protein of u 57.2 23 0.0005 27.0 4.6 40 405-450 15-54 (74)
183 KOG0500 Cyclic nucleotide-gate 56.8 2.7E+02 0.0059 29.7 16.6 74 359-437 259-358 (536)
184 KOG1053 Glutamate-gated NMDA-t 55.2 1.6E+02 0.0036 33.7 12.0 54 250-305 609-664 (1258)
185 PRK13290 ectC L-ectoine syntha 54.5 68 0.0015 27.5 7.4 69 400-476 38-106 (125)
186 KOG1054 Glutamate-gated AMPA-t 54.5 26 0.00057 37.6 5.7 55 249-304 594-648 (897)
187 PF13314 DUF4083: Domain of un 53.9 80 0.0017 22.6 6.3 15 311-325 42-56 (58)
188 PRK13264 3-hydroxyanthranilate 53.6 42 0.00092 30.5 6.2 59 415-479 52-110 (177)
189 smart00835 Cupin_1 Cupin. This 52.9 85 0.0018 27.6 8.2 78 399-479 32-111 (146)
190 PRK09108 type III secretion sy 49.6 2.4E+02 0.0052 29.1 11.8 63 276-338 178-240 (353)
191 PF02037 SAP: SAP domain; Int 43.8 57 0.0012 20.7 4.0 26 316-341 5-35 (35)
192 TIGR00328 flhB flagellar biosy 40.6 3.9E+02 0.0085 27.5 11.7 62 277-338 177-238 (347)
193 PF07697 7TMR-HDED: 7TM-HD ext 40.4 1.3E+02 0.0028 28.4 8.0 33 386-418 173-207 (222)
194 COG4792 EscU Type III secretor 40.3 3.9E+02 0.0084 26.6 12.2 40 259-304 165-205 (349)
195 PF14377 DUF4414: Domain of un 40.1 55 0.0012 27.2 4.6 46 327-372 51-105 (108)
196 PRK08156 type III secretion sy 39.9 4.1E+02 0.0089 27.5 11.7 60 279-338 174-233 (361)
197 PRK13109 flhB flagellar biosyn 39.6 4.1E+02 0.0089 27.5 11.7 61 279-339 188-248 (358)
198 PRK12721 secretion system appa 38.7 4.2E+02 0.0092 27.3 11.6 63 277-339 177-239 (349)
199 PRK12468 flhB flagellar biosyn 38.5 3.9E+02 0.0084 28.0 11.4 59 280-338 187-245 (386)
200 KOG1052 Glutamate-gated kainat 38.1 81 0.0018 35.8 7.1 56 250-306 381-436 (656)
201 PRK06298 type III secretion sy 37.7 4.7E+02 0.01 27.1 11.8 53 286-338 187-239 (356)
202 PF12973 Cupin_7: ChrR Cupin-l 37.4 1.4E+02 0.003 23.6 6.5 64 399-476 26-89 (91)
203 PF10011 DUF2254: Predicted me 37.1 1.3E+02 0.0029 31.3 7.9 58 248-305 98-155 (371)
204 COG0662 {ManC} Mannose-6-phosp 37.1 79 0.0017 27.0 5.3 47 399-450 38-85 (127)
205 PRK05702 flhB flagellar biosyn 36.2 4.9E+02 0.011 26.9 11.7 63 276-338 183-245 (359)
206 COG1917 Uncharacterized conser 35.7 64 0.0014 27.7 4.6 49 399-452 45-94 (131)
207 PF08285 DPM3: Dolichol-phosph 35.4 2.3E+02 0.0051 22.7 8.9 27 304-330 64-90 (91)
208 PRK04190 glucose-6-phosphate i 34.1 1.5E+02 0.0032 27.6 6.8 50 400-450 71-130 (191)
209 TIGR01404 FlhB_rel_III type II 30.6 6.1E+02 0.013 26.0 11.7 61 279-339 178-238 (342)
210 KOG3713 Voltage-gated K+ chann 30.4 1.6E+02 0.0035 31.3 7.0 8 63-70 175-182 (477)
211 PF06052 3-HAO: 3-hydroxyanthr 30.3 2.9E+02 0.0062 24.4 7.4 58 416-479 52-109 (151)
212 TIGR00933 2a38 potassium uptak 30.1 1.7E+02 0.0037 30.7 7.5 42 249-290 230-273 (390)
213 TIGR03404 bicupin_oxalic bicup 28.8 1.2E+02 0.0026 31.6 5.9 50 401-451 71-121 (367)
214 PRK11171 hypothetical protein; 28.8 1.9E+02 0.0042 28.5 7.1 70 400-477 64-135 (266)
215 PRK12772 bifunctional flagella 28.5 6.1E+02 0.013 28.5 11.7 61 279-339 442-502 (609)
216 PF00190 Cupin_1: Cupin; Inte 27.9 1.5E+02 0.0034 25.8 5.8 51 401-451 38-95 (144)
217 TIGR00934 2a38euk potassium up 27.6 4.2E+02 0.0092 30.5 10.0 87 201-297 451-544 (800)
218 KOG3473 RNA polymerase II tran 27.2 58 0.0013 26.1 2.4 23 325-347 61-83 (112)
219 COG3817 Predicted membrane pro 27.0 1.1E+02 0.0023 29.5 4.5 36 244-280 26-61 (313)
220 PRK07668 hypothetical protein; 26.3 1.9E+02 0.0041 28.3 6.3 60 312-371 5-65 (254)
221 TIGR03404 bicupin_oxalic bicup 25.7 1.4E+02 0.0031 31.0 5.8 73 399-476 247-322 (367)
222 PRK12773 flhB flagellar biosyn 25.2 7.1E+02 0.015 27.8 10.8 60 279-338 477-536 (646)
223 smart00513 SAP Putative DNA-bi 23.7 1.3E+02 0.0029 18.9 3.3 24 317-340 6-34 (35)
224 PRK09943 DNA-binding transcrip 23.3 2.9E+02 0.0063 25.3 6.9 53 416-476 127-179 (185)
225 PF03891 DUF333: Domain of unk 23.3 1.7E+02 0.0037 20.5 3.9 34 425-458 15-48 (50)
226 COG3837 Uncharacterized conser 23.2 1.4E+02 0.0031 26.5 4.3 47 402-453 47-95 (161)
227 COG1422 Predicted membrane pro 23.0 3E+02 0.0065 25.6 6.5 39 288-326 49-90 (201)
228 COG5559 Uncharacterized conser 23.0 78 0.0017 22.6 2.2 19 355-373 5-23 (65)
229 PRK11171 hypothetical protein; 22.0 1.9E+02 0.0042 28.5 5.7 49 398-451 185-234 (266)
230 PRK10750 potassium transporter 22.0 2.1E+02 0.0046 31.0 6.4 46 246-291 300-347 (483)
231 KOG4069 Uncharacterized conser 21.3 2.7E+02 0.0059 23.6 5.3 42 270-328 77-118 (154)
232 smart00511 ORANGE Orange domai 20.8 2.6E+02 0.0056 18.7 4.5 35 311-345 5-40 (45)
233 KOG3300 NADH:ubiquinone oxidor 20.7 2.8E+02 0.006 23.7 5.3 46 316-363 61-106 (146)
234 PF02386 TrkH: Cation transpor 20.4 3.5E+02 0.0077 27.9 7.6 40 251-290 295-340 (354)
235 PF07527 Hairy_orange: Hairy O 20.1 2.8E+02 0.006 18.4 4.8 34 310-343 4-38 (43)
236 PHA01757 hypothetical protein 20.0 4.1E+02 0.009 20.4 6.1 45 274-319 4-48 (98)
No 1
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=100.00 E-value=5.2e-93 Score=808.79 Aligned_cols=606 Identities=49% Similarity=0.812 Sum_probs=515.3
Q ss_pred CccccCCCCCCccccc--ccccccCCCeEEcCCChhHHHHHHHHHHHHHHHHHHhhhheecccC-CCCCeeehhhHhhHH
Q 006573 30 SHYSLSTGVLPSLGAR--SNRRVKLRRFIVSPYDRRYRVWETYLVLLVIYTAWASPFEFGFLRK-PQRPLSVIDNVVNGF 106 (640)
Q Consensus 30 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~s~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~-~~~~~~~i~~~~~~~ 106 (640)
+..+.+++++|+++.+ +....+.++++|+|+++++++|+.+++++++|+++++|++++|... ....++++|++++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~P~~~~~~~Wd~~~~~~~~y~~~~~p~~~~F~~~~~~~~~~~~d~i~~~~ 104 (823)
T PLN03192 25 SLRNLSKVILPPLGVPSYNQNHIGSDGWIISPMDSRYRWWETLMVVLVAYSAWVYPFEVAFLNASPKRGLEIADNVVDLF 104 (823)
T ss_pred ehhhcchhhccccCCCccccCccccCCeEECCCCcHHHHHHHHHHHHHHHHHHHHHHHHHeeCCCCCCCeeeHHHHHHHH
Confidence 3455778999999987 4667789999999999999999999999999999999999999654 345688999999999
Q ss_pred HhhhheeeeeEEEEeCCceEEEeChhHHHHHHhhhhhhhHhHhhccHHHHhhhCCCCc---cchhhhhHHHHHHHHHHHH
Q 006573 107 FAVDIILTFFVAYLDKATYLLVDCPKQIAWKYASSWLVFDVISTIPSELAQKISPKPL---QSYGLFNMLRLWRLRRVSA 183 (640)
Q Consensus 107 f~~d~~l~f~t~~~~~~~~~~v~~~~~i~~~Yl~~~f~~Dlis~lP~~~~~~~~~~~~---~~~~~l~~lrllrl~r~~~ 183 (640)
|++|++++|+++|+++++..+|.||++|+++|+++||++|++|++|++++..+..... ..+.+++++|++|+.|+.+
T Consensus 105 F~iDi~l~f~~ay~d~~~~~lV~d~~~I~~~Yl~~~f~~Dlis~lP~~~i~~~~~~~~~~~~~~~~l~llrl~Rl~ri~~ 184 (823)
T PLN03192 105 FAVDIVLTFFVAYIDPRTQLLVRDRKKIAVRYLSTWFLMDVASTIPFQALAYLITGTVKLNLSYSLLGLLRFWRLRRVKQ 184 (823)
T ss_pred HHHHHHhheeEEEEeCCCcEEEeCHHHHHHHHHHHhHHHHHHHHhHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988899999999999999999999999999988754443222 3567889999999999999
Q ss_pred HHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCccCcchHHHHHHHHHhhhhhhc
Q 006573 184 LFSRLEKDRNYNYFWVRCCKLIFVTLFAVHCAGCFYYLLAARYHNPERTWIGASLGQNFLEKSLWIRYVTSMYWSITTLT 263 (640)
Q Consensus 184 ~~~~l~~~~~~~~~~~~l~~l~~~~~~~~h~~ac~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~y~~s~yw~~~t~t 263 (640)
++.++++..+.++.+++++++++.+++++||+||+||+++..+...+.+|++... +++.+.+++.+|+.|+||+++|||
T Consensus 185 ~~~~le~~~~~~~~~~~~~kli~~~l~~~H~~aC~~y~i~~~~~~~~~~Wi~~~~-~~~~~~s~~~~Yi~slYwai~Tmt 263 (823)
T PLN03192 185 LFTRLEKDIRFSYFWIRCARLLSVTLFLVHCAGCLYYLIADRYPHQGKTWIGAVI-PNFRETSLWIRYISAIYWSITTMT 263 (823)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHhh-hccccCcHHHHHHHHHHHHHHHHh
Confidence 9999999888888889999999999999999999999999766667889998643 567788999999999999999999
Q ss_pred ccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Q 006573 264 TVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQMLAHLCL 343 (640)
Q Consensus 264 tvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~~y~~~ 343 (640)
||||||++|.|..|+++++++|++|++++||++|++++++...++++++|+++++.+++||+++++|++||+||++|+++
T Consensus 264 TVGYGDi~p~t~~E~i~~i~~ml~g~~~~a~~ig~i~~li~~~~~~~~~f~~~~~~~~~ym~~~~lp~~lq~ri~~y~~~ 343 (823)
T PLN03192 264 TVGYGDLHAVNTIEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKDQILAYMCL 343 (823)
T ss_pred hccCCCcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCcchHHHHhhhhHHHHhHHHHhhhHHhhhhccccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEE
Q 006573 344 KFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLMDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYIL 423 (640)
Q Consensus 344 ~~~~~~~~~~~~~~l~~lp~~lr~~i~~~~~~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I 423 (640)
+|+. +..+++++++.||++||.++..+++.+.++++++|+++|++++.+++..++.+.|+|||.|+.+||.++++|+|
T Consensus 344 ~~~~--~~~~~~~~l~~Lp~~Lr~~i~~~l~~~~l~~~~lF~~~s~~~l~~L~~~~~~~~~~pge~I~~qge~~~~lY~I 421 (823)
T PLN03192 344 RFKA--ESLNQQQLIDQLPKSICKSICQHLFLPVVEKVYLFKGVSREILLLLVTKMKAEYIPPREDVIMQNEAPDDVYIV 421 (823)
T ss_pred HHhh--ccccHHHHHHHcCHHHHHHHHHHHHHHHHhhCcchhcCCHHHHHHHHHhhheeeeCCCCEEEECCCCCceEEEE
Confidence 9986 56788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeceEEEEEeeCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccceEEEEeeHHHHHHHHHhchhhHHHHHHHHHHHH
Q 006573 424 VTGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHL 503 (640)
Q Consensus 424 ~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~~l 503 (640)
.+|.|++....+|++.++..+++|++|||.+++.+.|++++++|.+.|+++.|++++|.++++.+|++...+++++.++.
T Consensus 422 ~~G~V~i~~~~~~~e~~l~~l~~Gd~FGE~~~l~~~p~~~t~ra~~~s~ll~l~~~~f~~ll~~~p~d~~~i~~~~l~~~ 501 (823)
T PLN03192 422 VSGEVEIIDSEGEKERVVGTLGCGDIFGEVGALCCRPQSFTFRTKTLSQLLRLKTSTLIEAMQTRQEDNVVILKNFLQHH 501 (823)
T ss_pred EecEEEEEEecCCcceeeEEccCCCEecchHHhcCCCCCCeEEEcccEEEEEEEHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 99999998776778889999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HcccchhhhhhhhhhHhhhhccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcc--------
Q 006573 504 KDLKDPIMEGVLLETENMLARGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSE-------- 575 (640)
Q Consensus 504 ~~~~~~~~~~~~~~~~~rl~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~-------- 575 (640)
++..+......+.+.+.. .++.....+++.||..|+.+.++.|+++|+|+|..|..|+||||+|+..+..
T Consensus 502 ~~l~~l~v~~ll~~~~~~--~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~ 579 (823)
T PLN03192 502 KELHDLNVGDLLGDNGGE--HDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLK 579 (823)
T ss_pred hhhccccHHHHHhhcccc--cCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHh
Confidence 776654443333222211 1222233444445555555555555555555555555555555322211100
Q ss_pred ----------------cccccccchhHHHHHHhhc-------ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceee
Q 006573 576 ----------------FFSIPISCNNVIKFLLFNL-------FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYI 632 (640)
Q Consensus 576 ----------------~~~~~~~~~~~~~~L~~~~-------~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~ 632 (640)
|.|+..++.+++++|+..+ +..+||.||..|+.++++.|+++|||+|.+|.+|+|||
T Consensus 580 ~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpL 659 (823)
T PLN03192 580 HACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATAL 659 (823)
T ss_pred cCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 4455555566666666543 22357788888888888889999999999999999999
Q ss_pred eeeccccC
Q 006573 633 IRFFGFVH 640 (640)
Q Consensus 633 ~~~~~~~~ 640 (640)
+.|....|
T Consensus 660 h~A~~~g~ 667 (823)
T PLN03192 660 QVAMAEDH 667 (823)
T ss_pred HHHHHCCc
Confidence 88876554
No 2
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-84 Score=686.73 Aligned_cols=549 Identities=38% Similarity=0.610 Sum_probs=476.3
Q ss_pred ccccccCCCeEEcCCChhHHHHHHHHHHHHHHHHHHhhhheecccC----------CCCCeeehhhHhhHHHhhhheeee
Q 006573 46 SNRRVKLRRFIVSPYDRRYRVWETYLVLLVIYTAWASPFEFGFLRK----------PQRPLSVIDNVVNGFFAVDIILTF 115 (640)
Q Consensus 46 ~~~~~~~~~~~~~P~s~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~----------~~~~~~~i~~~~~~~f~~d~~l~f 115 (640)
+....+...++++|+|++++.|+.+++++++|++++.|+.++|... ...++.+++.++|++|++||+++|
T Consensus 59 ~~~~~~~~~~Ii~P~s~~~~~W~~~~Ll~~iya~~v~P~~f~f~~~~~~~~~~d~~~~~~l~v~d~ivD~fflvdIvL~F 138 (727)
T KOG0498|consen 59 KERVDKSRKWILDPYSPFYRVWNKFFLLLVIYAAFVDPLFFYFLLIDDERKCIDGKLAAPLTVLDTIVDIFFLVDIVLNF 138 (727)
T ss_pred hcccccccceeECCCChHHHHHHHHHHHHHHHHHHhccceeeEEecccccccccccccCceeeHHHHHHHHHHHHHHHhh
Confidence 3445666777999999999999999999999999999999998766 457899999999999999999999
Q ss_pred eEEEEeCCceEEEeChhHHHHHHhhhhhhhHhHhhccHHHHhhhCC------C--CccchhhhhHHHHHHHHHHHHHHHH
Q 006573 116 FVAYLDKATYLLVDCPKQIAWKYASSWLVFDVISTIPSELAQKISP------K--PLQSYGLFNMLRLWRLRRVSALFSR 187 (640)
Q Consensus 116 ~t~~~~~~~~~~v~~~~~i~~~Yl~~~f~~Dlis~lP~~~~~~~~~------~--~~~~~~~l~~lrllrl~r~~~~~~~ 187 (640)
+|+|+++.++.+|.||++|++||+++||++|++|++|++.+..+.. . ......++.+.||+|+.|+.+++++
T Consensus 139 rtayv~~~s~elV~dpk~IA~rYl~twFiiDlis~lP~~~i~~~~~~~~~~~~~~~~~l~~il~~~rL~Rl~Rv~~l~~r 218 (727)
T KOG0498|consen 139 RTAYVDPSSYELVDDPKKIAKRYLKTWFLIDLISTLPFDQIVVLVVIGSTSLALESTILVGILLLQRLPRLRRVIPLFAR 218 (727)
T ss_pred eEEEECCCCceeeeCHHHHHHHHHhhhHHHHHHHhcChhhheeeeeecccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998899999999999999999999999999999866533 1 1135678899999999999999999
Q ss_pred HHhhhchhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCc-cccccc----cCCC----ccCcchHHHHHHH
Q 006573 188 LEKDRNYNY--FWVRCCKLIFVTLFAVHCAGCFYYLLAARYH--NPER-TWIGAS----LGQN----FLEKSLWIRYVTS 254 (640)
Q Consensus 188 l~~~~~~~~--~~~~l~~l~~~~~~~~h~~ac~~~~~~~~~~--~~~~-~W~~~~----~~~~----~~~~~~~~~y~~s 254 (640)
+++...+.+ .|..+.++++.+++.+||+||+||+++.... +..+ +|+... ...+ +...+++.+|.+|
T Consensus 219 ~~k~~~~v~~~awa~~a~ll~~~~l~sH~~gc~wYlia~~~~~~~~~~~tw~~~l~~~~~~~~~~~~fg~~s~~~kY~~a 298 (727)
T KOG0498|consen 219 LEKDTGFVYETAWAGAALLLSVYLLASHWAGCIWYLIAIERPASCPRKATWLGSLGRLLSCYNLSFTFGIYSLALKYVYA 298 (727)
T ss_pred HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccccccccccccccccCcccccccchhHHHHHHHH
Confidence 999887766 4555779999999999999999999998655 5555 999852 1233 6778899999999
Q ss_pred HHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHH
Q 006573 255 MYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQ 334 (640)
Q Consensus 255 ~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 334 (640)
+||+++||||+|||+.+|.|..|++|+|++|++|.++||++||+|.+++++.+.+.++|+.++.++++||+++++|++||
T Consensus 299 Lyw~l~tLstvG~g~~~s~~~~E~iFsi~~mi~GllL~A~lIGNmt~~iqs~tsR~~~~r~k~rd~e~~m~~~~LP~~LR 378 (727)
T KOG0498|consen 299 LYWGLSTLSTVGYGLVHANNMGEKIFSIFIMLFGLLLFAYLIGNMTALLQSLTSRTEEMRDKMRDAEQWMSRRQLPPDLR 378 (727)
T ss_pred HHHHhhHhhhccCCccCCCCcHHHHHHHHHHHHhHHHHHHHHhhHHHhHHHHhHHHHHHHHHHHHHHHHHHhccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcccccCcchHHHHhhhhHHHHhHHHHhhhHHhhhhccccccCCHHHHHHHHhccccccccCCCeEEEeC
Q 006573 335 DQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLMDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQN 414 (640)
Q Consensus 335 ~rv~~y~~~~~~~~~~~~~~~~~l~~lp~~lr~~i~~~~~~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g 414 (640)
+||++|++++|+.. +|+++++++++||+.||.||+.+++.++++++|+|+++|+.++++|+..++...|+|||+|++||
T Consensus 379 qRi~~y~q~kw~~t-~Gvdee~lL~~LP~~LR~dI~~hL~~~lv~~vpLF~~md~~~L~al~~rlk~~~f~pge~iireG 457 (727)
T KOG0498|consen 379 QRIRRYEQYKWLAT-RGVDEEELLQSLPKDLRRDIKRHLCLDLVRKVPLFAGMDDGLLDALCSRLKPEYFTPGEYIIREG 457 (727)
T ss_pred HHHHHHHHHHHhhc-cCcCHHHHHHhCCHHHHHHHHHHHhHHHHhhCchhhcCCHHHHHHHHHHhhhhccCCCCeEEecC
Confidence 99999999999984 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeee-chhhhcC-CCeeeEEEEccceEEEEeeHHHHHHHHHhchhhH
Q 006573 415 EAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICG-EIGVLCY-RPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDG 492 (640)
Q Consensus 415 ~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fG-e~~l~~~-~~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~ 492 (640)
|+.++||||.+|.+++...++|.+.....+++||+|| |+..... .|.+.||+|++.|+++.|++++|..+++.+|.+.
T Consensus 458 d~v~~myFI~rG~le~~~~~~g~~~~~~~L~~Gd~~GeEl~~~~~~~p~t~TVralt~~el~~L~~~dL~~V~~~f~~~~ 537 (727)
T KOG0498|consen 458 DPVTDMYFIVRGSLESITTDGGGFFVVAILGPGDFFGEELLTWCLDLPQTRTVRALTYCELFRLSADDLKEVLQQFRRLG 537 (727)
T ss_pred CccceeEEEEeeeEEEEEccCCceEEEEEecCCCccchHHHHHHhcCCCCceeehhhhhhHHhccHHHHHHHHHHhHHHH
Confidence 9999999999999999998777788999999999999 7777666 7889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcccchhh-hhhhhh-hHhhhhccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCccccccc
Q 006573 493 TIIMNNLLQHLKDLKDPIM-EGVLLE-TENMLARGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLT 570 (640)
Q Consensus 493 ~~~~~~l~~~l~~~~~~~~-~~~~~~-~~~rl~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~ 570 (640)
..+++.....+....+... ...... ......++..+.+.....++..++....+..+..+..++..+.+|++|+
T Consensus 538 ~~~l~~~~r~~s~~~r~~aa~~iq~a~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~---- 613 (727)
T KOG0498|consen 538 SKFLQHTFRYYSHLWRTWAACFIQAAWRRHIKRKGEEELALEEEESAIRGDDRGSKSLLRAGILASRFAANGRPPL---- 613 (727)
T ss_pred HHHHHhHHHHhhhhhhhhhhhhHHHHHHHHHHhhccchhhhhcchhhhccccccchhhhhcccccccccccCCCcc----
Confidence 9998865554433222111 111111 1122333333333322223333344445566778889999999999999
Q ss_pred ccCcccccccccchhHHHHHHhhcccchhhHhhcCCCHHHHHHHHhccCCCCCCCccc
Q 006573 571 HFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGSENCVLLLLDYEADPNSIGMLV 628 (640)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g 628 (640)
|.++..|..+++..++++++++|..|..|
T Consensus 614 -----------------------------~~~~~~~~~~~~~~~~~~~~~p~f~~~~~ 642 (727)
T KOG0498|consen 614 -----------------------------HTAASRGSSDCALLLLQKPADPDFSDAEG 642 (727)
T ss_pred -----------------------------ccccccCccccccccCCCCCCCCcccccc
Confidence 99999999999999999999999998665
No 3
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.5e-66 Score=509.49 Aligned_cols=459 Identities=22% Similarity=0.385 Sum_probs=405.3
Q ss_pred ccccCCCCCCcccccccccccCCCeEEcCCChhHHHHHHHHHHHHHHHHHHhhhheecccCC--CCCeeehhhHhhHHHh
Q 006573 31 HYSLSTGVLPSLGARSNRRVKLRRFIVSPYDRRYRVWETYLVLLVIYTAWASPFEFGFLRKP--QRPLSVIDNVVNGFFA 108 (640)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~s~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~~--~~~~~~i~~~~~~~f~ 108 (640)
-.+++++.+|.|+ +..++-++-++-.++.|+.+|+++++++.+|+++++||.++|.... ...|.++|.++|++|+
T Consensus 187 vm~Lg~DilPQYr---QEaPKTpPHIiLHYcaFKt~WDWvIL~LTFYTAimVPyNvaFKnk~~~~vs~lvvDSiVDVIF~ 263 (971)
T KOG0501|consen 187 VMQLGSDILPQYR---QEAPKTPPHIILHYCAFKTIWDWVILILTFYTAIMVPYNVAFKNKQRNNVSWLVVDSIVDVIFF 263 (971)
T ss_pred HHHhccccchhhh---hcCCCCCCeEEEeeehhhhHHHHHHHHHHHHHHheeeeeeeecccccCceeEEEecchhhhhhh
Confidence 4557889999997 5688889999999999999999999999999999999999998765 4678999999999999
Q ss_pred hhheeeeeEEEEeCCceEEEeChhHHHHHHhhhhhhhHhHhhccHHHHhhhCCCCccchhhhhHHHHHHHHHHHHHHHHH
Q 006573 109 VDIILTFFVAYLDKATYLLVDCPKQIAWKYASSWLVFDVISTIPSELAQKISPKPLQSYGLFNMLRLWRLRRVSALFSRL 188 (640)
Q Consensus 109 ~d~~l~f~t~~~~~~~~~~v~~~~~i~~~Yl~~~f~~Dlis~lP~~~~~~~~~~~~~~~~~l~~lrllrl~r~~~~~~~l 188 (640)
+||+++|.|.|+.+|+ .+|.||+.|+.+|+|+||++|++|++|++++..+.......-.++..+++.|++|+.|.-+++
T Consensus 264 vDIvLNFHTTFVGPgG-EVvsdPkvIRmNYlKsWFvIDLLSCLPYDi~naF~~~degI~SLFSaLKVVRLLRLGRVaRKL 342 (971)
T KOG0501|consen 264 VDIVLNFHTTFVGPGG-EVVSDPKVIRMNYLKSWFVIDLLSCLPYDIFNAFERDDEGIGSLFSALKVVRLLRLGRVARKL 342 (971)
T ss_pred hhhhhhcceeeecCCC-ceecChhHHhHHHHHHHHHHHHHhcccHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 489999999999999999999999999999998877665555667777777777777777777
Q ss_pred HhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----C---CCcccccccc---CCC-----------ccCcch
Q 006573 189 EKDRNYNYFWVRCCKLIFVTLFAVHCAGCFYYLLAARYH----N---PERTWIGASL---GQN-----------FLEKSL 247 (640)
Q Consensus 189 ~~~~~~~~~~~~l~~l~~~~~~~~h~~ac~~~~~~~~~~----~---~~~~W~~~~~---~~~-----------~~~~~~ 247 (640)
...+.+.. .-++.+++.+.+++||.||+||.++..+- + ..++|+.... +.. .+.++.
T Consensus 343 D~YlEYGA--A~LvLLlC~y~lvAHWlACiWysIGd~ev~~~~~n~i~~dsWL~kLa~~~~tpY~~~~s~~~~~~gGPSr 420 (971)
T KOG0501|consen 343 DHYLEYGA--AVLVLLLCVYGLVAHWLACIWYSIGDYEVRDEMDNTIQPDSWLWKLANDIGTPYNYNLSNKGTLVGGPSR 420 (971)
T ss_pred HHHHHhhH--HHHHHHHHHHHHHHHHHHHhheeccchheecccccccccchHHHHHHhhcCCCceeccCCCceeecCCcc
Confidence 77666554 36778889999999999999999996321 1 1568886432 000 123455
Q ss_pred HHHHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhC
Q 006573 248 WIRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRN 327 (640)
Q Consensus 248 ~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (640)
-..|+.|+||.++.|||||+|++.|.|..|++|++++|++|.++||-++|.+..+++++++...+|++.++.+.+||+-.
T Consensus 421 ~S~YissLYfTMt~mttvGFGNiA~~TD~EKiF~v~mMii~aLLYAtIFG~vTTI~QQM~s~T~rYHeMlnnVReFlKL~ 500 (971)
T KOG0501|consen 421 TSAYISSLYFTMTCMTTVGFGNIAPNTDNEKIFGVCMMIIGALLYATIFGHVTTIIQQMTSNTNRYHEMLNNVREFLKLY 500 (971)
T ss_pred cceehhhhhhhhhhhhcccccccCCCccHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhhcccccCcchHHHHhhhhHHHHhHHHHhhhHHhhhhccccccCCHHHHHHHHhccccccccCC
Q 006573 328 QLPIRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLMDKVYLFRGVSNDLLFQLVSEMKAEYFPPK 407 (640)
Q Consensus 328 ~l~~~l~~rv~~y~~~~~~~~~~~~~~~~~l~~lp~~lr~~i~~~~~~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~~~g 407 (640)
++|+.|.+||.+|..-.|.+ .+|++.+.++.-.|+.+|.+|..++.++..+.+|.|+-.|+..++.++..++.....||
T Consensus 501 evPK~LsERVMDYvVSTWaM-tkGiDTeKVL~~CPKDMkADICVHLNRKVFnEHpaFRLASDGCLRaLAm~f~~~H~APG 579 (971)
T KOG0501|consen 501 EVPKGLSERVMDYVVSTWAM-TKGIDTEKVLGYCPKDMKADICVHLNRKVFNEHPAFRLASDGCLRALAMEFQTNHCAPG 579 (971)
T ss_pred hccHHHHHHHHHHHHHHhhh-hcCcCHHHHhhhCccccccceeeecchhhhccCcceeeccchhHHHHHHHHHhccCCCc
Confidence 99999999999999999998 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeechhhhcC--CCeeeEEEEccceEEEEeeHHHHHHHH
Q 006573 408 EDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLCY--RPQLFTVRTKRLSQLLRLNRTTFLNIV 485 (640)
Q Consensus 408 e~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~~--~~~~~~~~a~~~~~v~~i~~~~f~~ll 485 (640)
|.|++.||..|.++||++|.+++..++ .++..++.||+||+.--=.. ..+.++++|+++|.+..|.++.+.+++
T Consensus 580 DLlYHtGESvDaLcFvVsGSLEVIQDD----EVVAILGKGDVFGD~FWK~~t~~qs~ANVRALTYcDLH~IKrd~Ll~VL 655 (971)
T KOG0501|consen 580 DLLYHTGESVDALCFVVSGSLEVIQDD----EVVAILGKGDVFGDEFWKENTLGQSAANVRALTYCDLHMIKRDKLLKVL 655 (971)
T ss_pred ceeeecCCccceEEEEEecceEEeecC----cEEEEeecCccchhHHhhhhhhhhhhhhhhhhhhhhhhHHhHHHHHHHH
Confidence 999999999999999999999998732 37899999999998632221 235689999999999999999999999
Q ss_pred HhchhhHHHHHHHHH
Q 006573 486 QANVGDGTIIMNNLL 500 (640)
Q Consensus 486 ~~~~~~~~~~~~~l~ 500 (640)
+-|..+...+.+++.
T Consensus 656 dFYtAFanSFaRNl~ 670 (971)
T KOG0501|consen 656 DFYTAFANSFARNLT 670 (971)
T ss_pred HHHHHHHHHhhhcee
Confidence 988888877766654
No 4
>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-63 Score=490.36 Aligned_cols=419 Identities=23% Similarity=0.372 Sum_probs=375.4
Q ss_pred HHHHHHHHHHHhhhheecccCCC---CCeeehhhHhhHHHhhhheeeeeEEEEeCCceEEEeChhHHHHHHhhh-hhhhH
Q 006573 71 LVLLVIYTAWASPFEFGFLRKPQ---RPLSVIDNVVNGFFAVDIILTFFVAYLDKATYLLVDCPKQIAWKYASS-WLVFD 146 (640)
Q Consensus 71 ~~~~~~~~~~~~p~~~~f~~~~~---~~~~~i~~~~~~~f~~d~~l~f~t~~~~~~~~~~v~~~~~i~~~Yl~~-~f~~D 146 (640)
+.+.++|+++.++...+|.+-.. ..|..+|+++|++|++|++++.+++|+++| +.|.|-++.++||..+ .|.+|
T Consensus 3 vs~~vLYN~~~li~r~~F~di~~~y~~~wl~ld~~~D~vyllDi~v~~R~gyleqG--llV~~~~Kl~~hY~~s~~f~lD 80 (536)
T KOG0500|consen 3 VSLGVLYNMIVLIVRAAFDDIQSSYLENWLPLDYLFDFVYLLDIIVRSRTGYLEQG--LLVKDTSKLRKHYVHSTQFKLD 80 (536)
T ss_pred EEEehHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhcC--eeehhhHHHHHHHHHhhhhhhh
Confidence 44568899999999888876543 346789999999999999999999999999 5899999999999976 78999
Q ss_pred hHhhccHHHHhhhCCCCccchhhhhHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006573 147 VISTIPSELAQKISPKPLQSYGLFNMLRLWRLRRVSALFSRLEKDRNYNYFWVRCCKLIFVTLFAVHCAGCFYYLLAARY 226 (640)
Q Consensus 147 lis~lP~~~~~~~~~~~~~~~~~l~~lrllrl~r~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~h~~ac~~~~~~~~~ 226 (640)
++|++|+++++...+ ...+.|++|++|+.|+..++.+-+....+... .++++++.+.++++||.||++|+++...
T Consensus 81 ~l~liP~D~l~~~~~----~~~~~r~nRllk~yRl~~F~~rTetrT~~Pn~-fri~~lv~~~~ilfHWNaClYf~iS~~~ 155 (536)
T KOG0500|consen 81 VLSLIPLDLLLFKDG----SASLERLNRLLKIYRLFEFFDRTETRTTYPNA-FRISKLVHYCLILFHWNACLYFLISKAI 155 (536)
T ss_pred hhhhcchhHHhhcCC----cchHHHHHHHHHHHHHHHHHHHhccccCCchH-HHHHHHHHHHHHHHHHhhHHHHhhhHhc
Confidence 999999999876543 34567799999999999999887776665544 7899999999999999999999999988
Q ss_pred cCCCcccccccc-CCCc---cCcchHHHHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 006573 227 HNPERTWIGASL-GQNF---LEKSLWIRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNL 302 (640)
Q Consensus 227 ~~~~~~W~~~~~-~~~~---~~~~~~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~ 302 (640)
+...++|.+... ++.+ ..++...+|..|+||+..|+||+| -...|.|..|..|.++=.++|+++||.++|.|++.
T Consensus 156 g~~~d~wvY~~i~d~~~~~c~~~n~~ReY~~S~YWStLTlTTiG-e~P~P~t~~ey~F~I~d~LiGvliFAtIvG~VGsm 234 (536)
T KOG0500|consen 156 GFTTDDWVYPKINDPEFATCDAGNLTREYLYSLYWSTLTLTTIG-EQPPPVTSSEYAFVIVDTLIGVLIFATIVGNVGSM 234 (536)
T ss_pred CccccccccCCccCccccccchhHHHHHHHHHHHHHhhhhhhcc-CCCCCCcCchhhHHHHHHHHHHHHHhhhhccHhHH
Confidence 888888998643 1121 124488899999999999999999 46799999999999999999999999999999999
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhhhcccccCcchHHHHhhhhHHHHhHHHHhhhHHhhhhcc
Q 006573 303 VVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLMDKVY 382 (640)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~~y~~~~~~~~~~~~~~~~~l~~lp~~lr~~i~~~~~~~~l~~~~ 382 (640)
+++++..+.+|+.+|+.+++||+.+++|..+|.||.+||.|.|.+ ++..+|+++++.||+.|+.+|...++.+.|++++
T Consensus 235 Vtnmna~r~EFq~~mDGiK~YM~~RkV~~~lq~rVikwfdYlwa~-~~~~DEeevl~~LP~kL~aeIA~nvh~dTLkkV~ 313 (536)
T KOG0500|consen 235 VTNMNAARTEFQAKMDGIKQYMRYRKVPKALQTRVIKWFDYLWAH-KKIVDEEEVLKLLPDKLKAEIAINVHLDTLKKVR 313 (536)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhc-cccccHHHHHHhCCHHHHhHhHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999987 4667999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeechhhhc-----
Q 006573 383 LFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLC----- 457 (640)
Q Consensus 383 ~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~----- 457 (640)
+|.++.+.++.++...++++.|.|||+|+++||.+.+||+|.+|.+++..++++ .+...+.+|++|||++++.
T Consensus 314 iF~~ce~~lL~elVLklk~qvfSPgDyICrKGdvgkEMyIVk~G~L~Vv~dDg~--t~~~~L~~G~~FGEisIlni~g~~ 391 (536)
T KOG0500|consen 314 IFQDCEAGLLVELVLKLKPQVFSPGDYICRKGDVGKEMYIVKEGKLAVVADDGV--TVFVTLKAGSVFGEISILNIKGNK 391 (536)
T ss_pred HHHhcchhHHHHHHHHhcceeeCCCCeEEecCcccceEEEEEccEEEEEecCCc--EEEEEecCCceeeeeEEEEEcCcc
Confidence 999999999999999999999999999999999999999999999999875433 3678999999999999863
Q ss_pred -CCCeeeEEEEccceEEEEeeHHHHHHHHHhchhhHHHHHHHHH
Q 006573 458 -YRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLL 500 (640)
Q Consensus 458 -~~~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~ 500 (640)
|.+|++++++++++.+++++++|+.+.+++||+....+..+..
T Consensus 392 ~gNRRtanvrSvGYSDlfvLskdDl~~aL~eYP~a~~~L~~kgr 435 (536)
T KOG0500|consen 392 NGNRRTANVRSVGYSDLFVLSKDDLWEALSEYPDARKRLEEKGR 435 (536)
T ss_pred cCCcceeeeeeeccceeeEeeHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5689999999999999999999999999999998887775533
No 5
>KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-58 Score=456.18 Aligned_cols=436 Identities=19% Similarity=0.349 Sum_probs=393.3
Q ss_pred cCCCeEEcCCC-hhHHHHHHHHHHHHHHHHHHhhhheecccCC---CCCeeehhhHhhHHHhhhhee-eeeEEEEeCCce
Q 006573 51 KLRRFIVSPYD-RRYRVWETYLVLLVIYTAWASPFEFGFLRKP---QRPLSVIDNVVNGFFAVDIIL-TFFVAYLDKATY 125 (640)
Q Consensus 51 ~~~~~~~~P~s-~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~~---~~~~~~i~~~~~~~f~~d~~l-~f~t~~~~~~~~ 125 (640)
....-.++|+. ++...|-.++++...|+++.+|++.+|.... ...|++.|++||+|+++|+++ +-+.-|...|.
T Consensus 214 ~~~~~sidp~~~r~Y~~WL~lVtlaf~~N~w~IPlR~sfPyQT~dN~~~Wli~Dy~cDiIYllDmlf~q~Rl~fvrgG~- 292 (815)
T KOG0499|consen 214 IKLPNSIDPYTDRLYLLWLLLVTLAFNWNCWFIPLRLSFPYQTADNIHYWLIADYICDIIYLLDMLFIQPRLQFVRGGD- 292 (815)
T ss_pred cCCCcccCcccchHHHHHHHHHHHHHhhceeEEeeeccCCccccccchhhhhHHHHhhHHHHHHHhhhhhhheeeeCce-
Confidence 33455789998 8999999999999999999999999996543 457889999999999999964 44555666664
Q ss_pred EEEeChhHHHHHHhhh-hhhhHhHhhccHHHHhhhCCCCccchhhhhHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 006573 126 LLVDCPKQIAWKYASS-WLVFDVISTIPSELAQKISPKPLQSYGLFNMLRLWRLRRVSALFSRLEKDRNYNYFWVRCCKL 204 (640)
Q Consensus 126 ~~v~~~~~i~~~Yl~~-~f~~Dlis~lP~~~~~~~~~~~~~~~~~l~~lrllrl~r~~~~~~~l~~~~~~~~~~~~l~~l 204 (640)
+|.|.+..++||+++ .|-+|++|++|+++.+.+++. -.++|+.|++++..++.++..++..+...+ ..++++.
T Consensus 293 -~ik~kndtrk~Yl~sr~FklDllsiLPldllY~~~G~----~p~wR~~R~lK~~sF~e~~~~Le~i~s~~y-~~RV~rT 366 (815)
T KOG0499|consen 293 -IIKDKNDTRKHYLTSRKFKLDLLSILPLDLLYLFFGF----NPMWRANRMLKYTSFFEFNHHLESIMSKAY-IYRVIRT 366 (815)
T ss_pred -EEEechHHHHHHHHhhhhhhhHHhhhhHHHHHHHhcc----chhhhhhhHHHHHHHHHHHHHHHHHhcchh-hhhhHHH
Confidence 899999999999977 799999999999999887653 245588888888888888888888776544 4899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCccCcchHHHHHHHHHhhhhhhcccccCCcccCCchhhHHHHHH
Q 006573 205 IFVTLFAVHCAGCFYYLLAARYHNPERTWIGASLGQNFLEKSLWIRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILF 284 (640)
Q Consensus 205 ~~~~~~~~h~~ac~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~ 284 (640)
+.++++++|+.||++|+.+....-+.+.|++... ...|+.|+|||+-|++|+| |...|+|..|.+|..+-
T Consensus 367 ~~YmlyilHinacvYY~~SayqglG~~rWVydg~---------Gn~YiRCyyfa~kt~~tiG-~~P~P~~~~E~Vf~~~~ 436 (815)
T KOG0499|consen 367 TGYLLYILHINACVYYWASAYQGLGTTRWVYDGE---------GNEYIRCYYFAVKTLITIG-GLPEPQTLFEIVFQLLN 436 (815)
T ss_pred HHHHHHHHhhhHHHHHHHHhhcccccceeEEcCC---------CCceeeehhhHHHHHHHhc-CCCCcchHHHHHHHHHH
Confidence 9999999999999999999877778899987642 3579999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhhhcccccCcchHHHHhhhhHH
Q 006573 285 MLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKA 364 (640)
Q Consensus 285 ~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~~y~~~~~~~~~~~~~~~~~l~~lp~~ 364 (640)
.+.|+++|++++|.|-.++...+..++.|+..|+....||++.++|.+.|.||+.+|+|.|+. +...+|.++++.||..
T Consensus 437 w~mGVFvFslliGQmRDvi~aAt~nq~~fr~~mD~tl~ym~~~~i~kevqnRVr~WyeyTW~s-Qr~LDEs~ll~~LP~k 515 (815)
T KOG0499|consen 437 WFMGVFVFSLLIGQMRDVIGAATANQNYFRACMDDTLAYMNNYSIPKEVQNRVRTWYEYTWDS-QRMLDESDLLKTLPTK 515 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHhhhhh-hccccHHHHHHhcchh
Confidence 999999999999999999999999999999999999999999999999999999999999987 5789999999999999
Q ss_pred HHhHHHHhhhHHhhhhccccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEe
Q 006573 365 IRSSISHYLFYSLMDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEA 444 (640)
Q Consensus 365 lr~~i~~~~~~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l 444 (640)
++.++...++...+.++.+|.+|+.+.+..+...++...|.|||.|+++||.+.+||+|..|.|+|...++| +.++.++
T Consensus 516 lq~dlAi~V~y~~lSKVqLFq~Cdr~mirDmllrLRsV~yLPgDfVCkKGeiGkEMYIIk~GqvQVlGGp~~-~~Vl~tL 594 (815)
T KOG0499|consen 516 LQLDLAIDVNYSILSKVQLFQGCDRQMIRDMLLRLRSVLYLPGDFVCKKGEIGKEMYIIKHGQVQVLGGPDG-TKVLVTL 594 (815)
T ss_pred heeeeeEEeehhhhhHHHHhhhhHHHHHHHHHHHhhceeecCCceeeecccccceeEEeecceEEEecCCCC-CEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999887666 4588999
Q ss_pred cCCCeeechhhhc---CCCeeeEEEEccceEEEEeeHHHHHHHHHhchhhHHHHHHHHHHHHHc
Q 006573 445 KTGEICGEIGVLC---YRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKD 505 (640)
Q Consensus 445 ~~G~~fGe~~l~~---~~~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~~l~~ 505 (640)
.+|++|||++++. +.+|+++++|.+.|.++.++++++.+++..||+....+.+.+..-++.
T Consensus 595 ~~GsVFGEISLLaigG~nRRTAnV~a~Gf~nLfvL~KkdLneil~~YP~sq~iLrkkAr~llk~ 658 (815)
T KOG0499|consen 595 KAGSVFGEISLLAIGGGNRRTANVVAHGFANLFVLDKKDLNEILVHYPDSQRILRKKARVLLKQ 658 (815)
T ss_pred cccceeeeeeeeeecCCCccchhhhhcccceeeEecHhHHHHHHHhCccHHHHHHHHHHHHHHh
Confidence 9999999999875 467899999999999999999999999999999888887777665554
No 6
>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-33 Score=276.69 Aligned_cols=240 Identities=20% Similarity=0.304 Sum_probs=183.4
Q ss_pred cccccCCCeEEcCCChh-HHHHHHHHHHHHHHHHHHhhhhe--ecccC-----------------CCCCeeehhhHhhHH
Q 006573 47 NRRVKLRRFIVSPYDRR-YRVWETYLVLLVIYTAWASPFEF--GFLRK-----------------PQRPLSVIDNVVNGF 106 (640)
Q Consensus 47 ~~~~~~~~~~~~P~s~~-~~~w~~~~~~~~~~~~~~~p~~~--~f~~~-----------------~~~~~~~i~~~~~~~ 106 (640)
..|+++|.++++|.|+. .++..++.+++++.+++...+.+ .|+.. +...+.++|.+|.+|
T Consensus 173 ~~r~rlW~~~E~P~SS~~Ak~fa~~Sv~FVlvSiv~lcL~T~pe~q~~~~~~~~~~~~~~~~~~~~~p~l~~vE~vCi~W 252 (477)
T KOG3713|consen 173 RLRRRLWALLENPGSSLAAKVFAVLSVLFVLVSIVGLCLGTLPEFQVPDKQGEGLLVNVEKIESEPHPILTYVETVCIAW 252 (477)
T ss_pred hHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCHhhhchhhccccccccccccCCCCCCchHHHHHHHHHH
Confidence 46899999999999765 45666666666666665554443 22211 224578899999999
Q ss_pred HhhhheeeeeEEEEeCCceEEEeChhHHHHHHhhhh-hhhHhHhhccHHHHhhhCCCC---c----------cchhhhhH
Q 006573 107 FAVDIILTFFVAYLDKATYLLVDCPKQIAWKYASSW-LVFDVISTIPSELAQKISPKP---L----------QSYGLFNM 172 (640)
Q Consensus 107 f~~d~~l~f~t~~~~~~~~~~v~~~~~i~~~Yl~~~-f~~Dlis~lP~~~~~~~~~~~---~----------~~~~~l~~ 172 (640)
|++|+++||..+ |++ .+|+|+. +++|++|++||++........ . +.++++|+
T Consensus 253 FT~E~llR~~~~------------P~k--~~F~k~pLNIIDllAIlPFYielll~~~~~~~~~~l~~~~~vvrvlR~lRI 318 (477)
T KOG3713|consen 253 FTFEYLLRFLVA------------PNK--LEFFKSPLNIIDLLAILPFYLELLLTLFGGESLKELENAGLVVRVLRVLRI 318 (477)
T ss_pred HHHHHHHHHHcC------------chH--HHHHhCcchHHHHHHHHHHHHHHHHHHhccchHHHHhhhhhhHHHHHHHHH
Confidence 999999999655 776 8999884 699999999999865432111 1 12333333
Q ss_pred HHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCccCcchHHHHH
Q 006573 173 LRLWRLRRVSALFSRLEKDRNYNYFWVRCCKLIFVTLFAVHCAGCFYYLLAARYHNPERTWIGASLGQNFLEKSLWIRYV 252 (640)
Q Consensus 173 lrllrl~r~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~h~~ac~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~y~ 252 (640)
+|++||.|.+.-++.+..+++.++. .+..+++++.+.+-+||.+.|+++.. ..++.|++++
T Consensus 319 ~RI~KLaRhS~GLr~lg~Tlr~S~~--ElglLllfL~~GI~iFStlvY~~Ek~-----------------~~~~~FtSIP 379 (477)
T KOG3713|consen 319 LRIFKLARHSTGLRTLGLTLRRSYR--ELGLLLLFLAVGIVIFSTLVYFAEKD-----------------EPDTKFTSIP 379 (477)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhhc-----------------CCCCCCcccc
Confidence 3344444444456677778887774 77888888888999999999999953 3444589999
Q ss_pred HHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q 006573 253 TSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQA 319 (640)
Q Consensus 253 ~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~ 319 (640)
.|+|||++|||||||||++|+|..|++++..++++|+++.|+||+.|.+.|+..++..+..++..+.
T Consensus 380 a~~WWaiVTMTTVGYGDm~P~T~~Gklvas~cil~GVLvlAlPItiIv~nF~~~y~~~k~~~~~~~~ 446 (477)
T KOG3713|consen 380 AGFWWAVVTMTTVGYGDMVPVTVLGKLVASLCILCGVLVLALPITIIVNNFSMYYSELKAREKAPKR 446 (477)
T ss_pred chhheeeEEEeeecccCccccccchHHHHHHHHHHhHHHhhcchHhHhhhHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999999999999988777665554443
No 7
>KOG1545 consensus Voltage-gated shaker-like K+ channel KCNA [Inorganic ion transport and metabolism]
Probab=99.98 E-value=1.8e-34 Score=272.15 Aligned_cols=262 Identities=18% Similarity=0.267 Sum_probs=200.9
Q ss_pred cchHHHhhhhcCCCccccCCCCCCcccccccccccCCCeEEcCCChhHH-HHHHHHHHHHHHHHHHhhhhe--ecccC--
Q 006573 17 CGQEEIEQLSRDGSHYSLSTGVLPSLGARSNRRVKLRRFIVSPYDRRYR-VWETYLVLLVIYTAWASPFEF--GFLRK-- 91 (640)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~s~~~~-~w~~~~~~~~~~~~~~~p~~~--~f~~~-- 91 (640)
.|++.+++++++++.....+..+|.- ..+++.|..+..|+|+... ...++.+++++.++++.-+++ .|..+
T Consensus 146 lG~eame~FredEG~~~~eE~plP~n----~fqRqvWlLfEYPeSS~~AR~iAiVSVlVIliSIviFClETlPefrderd 221 (507)
T KOG1545|consen 146 LGDEAMERFREDEGFIKPEERPLPRN----EFQRQVWLLFEYPESSGPARIIAIVSVLVILISIVIFCLETLPEFRDERD 221 (507)
T ss_pred hhHHHHHHHHhhcCCCCcccccCCcc----hHHhhhhheeecccccCCeeeeeehhHHHHHHHHHHHHHHhCchhhhhcc
Confidence 57999999999999877777888876 5789999999999998653 222222333333333332222 23222
Q ss_pred -----------------------------CCCCeeehhhHhhHHHhhhheeeeeEEEEeCCceEEEeChhHHHHHHhhh-
Q 006573 92 -----------------------------PQRPLSVIDNVVNGFFAVDIILTFFVAYLDKATYLLVDCPKQIAWKYASS- 141 (640)
Q Consensus 92 -----------------------------~~~~~~~i~~~~~~~f~~d~~l~f~t~~~~~~~~~~v~~~~~i~~~Yl~~- 141 (640)
...+++++|..|.+||.+|+++||+.| |.| ..|.++
T Consensus 222 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~f~dPFFiVEt~CIiWFtfEllvRf~aC------------PsK--~~Ff~ni 287 (507)
T KOG1545|consen 222 LTGHFPAGTGGGVMNPTSGPELLDLGDTKFTDPFFIVETLCIIWFTFELLVRFFAC------------PSK--ATFFRNI 287 (507)
T ss_pred ccccccccCCCcccCCCCCcccccccccccCCchHhHHHHHHHHHhHHHHHHHhcC------------ccH--HHHHHHH
Confidence 024789999999999999999999776 666 667776
Q ss_pred hhhhHhHhhccHHHHhhhCC--C---C---c--cchhhhhHHHHHHHHHHHHH------HHHHHhhhchhHHHHHHHHHH
Q 006573 142 WLVFDVISTIPSELAQKISP--K---P---L--QSYGLFNMLRLWRLRRVSAL------FSRLEKDRNYNYFWVRCCKLI 205 (640)
Q Consensus 142 ~f~~Dlis~lP~~~~~~~~~--~---~---~--~~~~~l~~lrllrl~r~~~~------~~~l~~~~~~~~~~~~l~~l~ 205 (640)
.+++|++|++|+++...... . + . -.+.++|++||.|++|++++ ++.+.++++.+. ..+..|+
T Consensus 288 mNiIDiVaI~PyFitlgtela~q~g~g~~gqqaMSlAILRViRLVRVFRIFKLSRHSkGLQILGqTl~aSm--rElgLLI 365 (507)
T KOG1545|consen 288 MNIIDIVAIIPYFITLGTELAEQQGGGGQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLRASM--RELGLLI 365 (507)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhcCCccchhhhhHHHHHHHHHHHHhhheeeccccchHHHHHHHHHHHH--HHHHHHH
Confidence 67999999999988653211 0 0 1 24566677777666666554 567788887765 4788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCccCcchHHHHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHH
Q 006573 206 FVTLFAVHCAGCFYYLLAARYHNPERTWIGASLGQNFLEKSLWIRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFM 285 (640)
Q Consensus 206 ~~~~~~~h~~ac~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~ 285 (640)
+++++.+.+++...|+.+.. +.++.+.++++|||||++|||||||||+.|.|..+|+++.+|+
T Consensus 366 FFlfIgviLFsSavYFAEad-----------------e~~S~F~SIPdaFWwavVTMTTVGYGDm~P~TvgGKIVGslCA 428 (507)
T KOG1545|consen 366 FFLFIGVILFSSAVYFAEAD-----------------EPESHFSSIPDAFWWAVVTMTTVGYGDMVPVTVGGKIVGSLCA 428 (507)
T ss_pred HHHHHHHHHHhceeeeeecC-----------------CCccCCCcCcccceEEEEEEEeeccccceecccCceehhhHHh
Confidence 99999999999999887742 5678899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhHHHHH
Q 006573 286 LFNLGLTAYLIGNMTNLVVHGTSRTRKFRD 315 (640)
Q Consensus 286 i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~ 315 (640)
+.|++..|++++.|.+.+...+.+.++-++
T Consensus 429 iaGVLTiALPVPVIVsNFnyFYhrEte~ee 458 (507)
T KOG1545|consen 429 IAGVLTIALPVPVIVSNFNYFYHRETEGEE 458 (507)
T ss_pred hhhheEecccccEEEecccceeeccccchh
Confidence 999999999999999999888776655443
No 8
>KOG4390 consensus Voltage-gated A-type K+ channel KCND [Inorganic ion transport and metabolism]
Probab=99.90 E-value=8.2e-26 Score=215.63 Aligned_cols=255 Identities=17% Similarity=0.232 Sum_probs=184.1
Q ss_pred hhhhcCCCccccCCCCCCcccccccccccCCCeEEcCCChhHH-HHHHHHHHH----HHHHHH-Hhhhheeccc--C---
Q 006573 23 EQLSRDGSHYSLSTGVLPSLGARSNRRVKLRRFIVSPYDRRYR-VWETYLVLL----VIYTAW-ASPFEFGFLR--K--- 91 (640)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~s~~~~-~w~~~~~~~----~~~~~~-~~p~~~~f~~--~--- 91 (640)
+.+.+++...+-+++.+|.- ...+.+.|+-+.+|..+... ++-.+.-++ ++.+.+ .+|.-.+-.. +
T Consensus 145 ERL~dd~~~e~ag~~~~p~~---ls~rq~mWrAFENPHTst~ALVFYYVtGFFIAVSVi~NvVETiPCg~~~~~~~e~pC 221 (632)
T KOG4390|consen 145 ERLQDDEDAENAGGPALPAG---LSLRQRMWRAFENPHTSTAALVFYYVTGFFIAVSVIANVVETIPCGGSPGRSKELPC 221 (632)
T ss_pred HHhhchhhhhhcCCCCCccc---chHHHHHHHHhcCCCcchhhhhhhhhhhhhhhhhhhhceeeecccCCCCCCceeccc
Confidence 34555666555566666662 15688999999999976532 221111111 222221 2232221110 0
Q ss_pred ---CCCCeeehhhHhhHHHhhhheeeeeEEEEeCCceEEEeChhHHHHHHhhhh-hhhHhHhhccHHHHhhhCCCCc---
Q 006573 92 ---PQRPLSVIDNVVNGFFAVDIILTFFVAYLDKATYLLVDCPKQIAWKYASSW-LVFDVISTIPSELAQKISPKPL--- 164 (640)
Q Consensus 92 ---~~~~~~~i~~~~~~~f~~d~~l~f~t~~~~~~~~~~v~~~~~i~~~Yl~~~-f~~Dlis~lP~~~~~~~~~~~~--- 164 (640)
....++.+|..|.++|..|+++|++.+ |.. .+|+++- -++|+++++|+++-.....+..
T Consensus 222 GEry~~aFFclDTACVmIFT~EYlLRL~aA------------PsR--~rF~RSvMSiIDVvAIlPYYigLv~t~N~DVSG 287 (632)
T KOG4390|consen 222 GERYPVAFFCLDTACVMIFTGEYLLRLFAA------------PSR--YRFLRSVMSIIDVVAILPYYIGLVMTDNEDVSG 287 (632)
T ss_pred ccccceeeEEecceeEEEeeHHHHHHHHcC------------chH--HHHHHHHHHHHHHhhhhhhheEEEecCCccccc
Confidence 124588999999999999999999876 554 7899885 4999999999987554433221
Q ss_pred --cchhhhhHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCc
Q 006573 165 --QSYGLFNMLRLWRLRRVSALFSRLEKDRNYNYFWVRCCKLIFVTLFAVHCAGCFYYLLAARYHNPERTWIGASLGQNF 242 (640)
Q Consensus 165 --~~~~~l~~lrllrl~r~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~h~~ac~~~~~~~~~~~~~~~W~~~~~~~~~ 242 (640)
..++++|++|++++.|.++.++.+..+++.-. -.+.-+++.+.+.+.++|.++||.+..
T Consensus 288 aFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCA--SELGFLlFSLtMAIIIFATvMfYAEKg----------------- 348 (632)
T KOG4390|consen 288 AFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCA--SELGFLLFSLTMAIIIFATVMFYAEKG----------------- 348 (632)
T ss_pred eeEEEEeeeeeeeeeecccccccchhhhhHHHHH--HHHhHHHHHHHHHHHHHHHHHHhhhcc-----------------
Confidence 24566666666667777767777766665443 256667777888888999999998853
Q ss_pred cCcchHHHHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHH
Q 006573 243 LEKSLWIRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKF 313 (640)
Q Consensus 243 ~~~~~~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~ 313 (640)
.+.+.+++++.|||+.++||||.||||++|.|..|++|+.+|.+.|++++|++++.|.+.++..+.+++.-
T Consensus 349 ~~at~FTsIPaaFWYTIVTmTTLGYGDMVp~TIaGKIfGsiCSLSGVLVIALPVPvIVSNFSRIYHQNQRA 419 (632)
T KOG4390|consen 349 SSATKFTSIPAAFWYTIVTMTTLGYGDMVPSTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRA 419 (632)
T ss_pred ccccccccCcHhHhhheeeeeeccccccchHHHHHHHhhhhhcccceEEEeccccEEEechhHHHhhhhhh
Confidence 56778899999999999999999999999999999999999999999999999999999998887655433
No 9
>KOG1419 consensus Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism]
Probab=99.89 E-value=5.8e-24 Score=212.44 Aligned_cols=270 Identities=17% Similarity=0.177 Sum_probs=183.7
Q ss_pred ccccCCCeEEcCCChhHHHHHHHHHHHHHHHHHHhhhheecc--cCCCCCeeehhhHhhHHHhhhheeeeeEEEEeCCce
Q 006573 48 RRVKLRRFIVSPYDRRYRVWETYLVLLVIYTAWASPFEFGFL--RKPQRPLSVIDNVVNGFFAVDIILTFFVAYLDKATY 125 (640)
Q Consensus 48 ~~~~~~~~~~~P~s~~~~~w~~~~~~~~~~~~~~~p~~~~f~--~~~~~~~~~i~~~~~~~f~~d~~l~f~t~~~~~~~~ 125 (640)
-|.+++.+++.|.++....+.++++++++.++++..+...-+ ......++++|+++.++|.+|+++|++.+=....-
T Consensus 77 ~q~~vYN~LERPrGWkaf~YH~~VFllVl~CLILsV~STi~e~~~~a~~~L~~LEiv~IV~Fg~EfivRlWSAGC~~rY- 155 (654)
T KOG1419|consen 77 IQNKVYNFLERPRGWKAFLYHFFVFLLVLSCLILSVLSTIEEYEKLASGILYILEIVMIVFFGLEFIVRLWSAGCCCRY- 155 (654)
T ss_pred HHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-
Confidence 356788999999999899999999888888887776665222 12346788999999999999999999876333221
Q ss_pred EEEeChhHHHHHHhhhhh-hhHhHhhccHHHHhhhCCCCc----cchhhhhHHHHHHHHHHHHHHHHHHhhhchhHHHHH
Q 006573 126 LLVDCPKQIAWKYASSWL-VFDVISTIPSELAQKISPKPL----QSYGLFNMLRLWRLRRVSALFSRLEKDRNYNYFWVR 200 (640)
Q Consensus 126 ~~v~~~~~i~~~Yl~~~f-~~Dlis~lP~~~~~~~~~~~~----~~~~~l~~lrllrl~r~~~~~~~l~~~~~~~~~~~~ 200 (640)
--+.-+.+|.++.| ++|++.++.-..+..+.+.+. ..++-+|++.++|++|+.+-...|+-....-+....
T Consensus 156 ----rG~~GRLrFarkp~cvIDiivi~Asi~vl~~g~qG~vfatSalrslRFlQILRmlr~DRrggTWKLLGSvV~aH~~ 231 (654)
T KOG1419|consen 156 ----RGWYGRLRFARKPFCVIDIIVIIASIAVLAAGSQGNVFATSALRSLRFLQILRMLRMDRRGGTWKLLGSVVYAHSK 231 (654)
T ss_pred ----ccceeeEEeecCCceEEEEeeeeeeeeEEEecCccceeehhhhhhhHHHHHHHHHHhhccCchhhhhhhhhhhhHH
Confidence 12223377887766 899986654433333322111 235566777777777776655444433332222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCccCcchHHHHHHHHHhhhhhhcccccCCcccCCchhhHH
Q 006573 201 CCKLIFVTLFAVHCAGCFYYLLAARYHNPERTWIGASLGQNFLEKSLWIRYVTSMYWSITTLTTVGYGDLHPVNTREMVF 280 (640)
Q Consensus 201 l~~l~~~~~~~~h~~ac~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~ 280 (640)
-+....++.+++.+++..+.|+++-+..+ -..+..|.+|.+|+||.++|+||+||||.+|+|+.++++
T Consensus 232 ELiTt~YIGFL~LIfsSflVYLaEKd~~~------------e~~n~~F~TyADALWWG~ITltTIGYGDk~P~TWlGr~l 299 (654)
T KOG1419|consen 232 ELITTWYIGFLVLIFSSFLVYLAEKDAQG------------EGTNDEFPTYADALWWGVITLTTIGYGDKTPQTWLGRLL 299 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccc------------ccccccchhHHHHHHhhheeEEeeccCCcCcccchhHHH
Confidence 33344555666666666666665422111 145677899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 006573 281 DILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQMLAHL 341 (640)
Q Consensus 281 ~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~~y~ 341 (640)
++++.++|+.+||++-|.+++-|...-+++. .=++|-++++.-.+|.+-.=+||
T Consensus 300 aa~fsligiSFFALPAGILGSGfALKVQeq~-------RQKHf~rrr~pAA~LIQc~WR~y 353 (654)
T KOG1419|consen 300 AACFSLIGISFFALPAGILGSGFALKVQEQH-------RQKHFNRRRNPAASLIQCAWRYY 353 (654)
T ss_pred HHHHHHHHHHHHhcccccccchhhhhhHHHH-------HHHHHHhhcchHHHHHHHHHHHH
Confidence 9999999999999999999988865433221 11245556666666665554444
No 10
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=8.9e-18 Score=144.99 Aligned_cols=111 Identities=24% Similarity=0.175 Sum_probs=99.8
Q ss_pred HhhhhccCCCCCcceeeeeecCCHHHHHHHHh-cCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhh----
Q 006573 519 ENMLARGRMDLPLSLCFAALRGDDLLLHQLLK-RGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFN---- 593 (640)
Q Consensus 519 ~~rl~~g~~~l~~~l~~a~~~g~~~~v~~Ll~-~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~---- 593 (640)
.....+.+.+.++|+|+||..|+.+++++|+. .+..+|.+|..|+||| |.++++++.++|+-|+..
T Consensus 28 kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPl---------hia~s~g~~evVk~Ll~r~~ad 98 (226)
T KOG4412|consen 28 KSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPL---------HIAASNGNDEVVKELLNRSGAD 98 (226)
T ss_pred hhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchh---------hhhhhcCcHHHHHHHhcCCCCC
Confidence 34555666788999999999999999999994 5778999999999999 999999999999999965
Q ss_pred ------cccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccc
Q 006573 594 ------LFYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGF 638 (640)
Q Consensus 594 ------~~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~ 638 (640)
++.++||+|+.+|..|++++|+++||.++.+|++|.||++||++-
T Consensus 99 vna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAav 149 (226)
T KOG4412|consen 99 VNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAV 149 (226)
T ss_pred cceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhc
Confidence 477789999999999999999999999999999999999999763
No 11
>PRK09392 ftrB transcriptional activator FtrB; Provisional
Probab=99.72 E-value=1e-16 Score=156.69 Aligned_cols=150 Identities=17% Similarity=0.205 Sum_probs=137.3
Q ss_pred HHhhhhccccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeechh
Q 006573 375 YSLMDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEIG 454 (640)
Q Consensus 375 ~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~ 454 (640)
.++++..++|+.++++.++.+...++.+.|++|++|+++||.++.+|+|.+|.|+++...+|++..+..+.+|++||+.+
T Consensus 6 ~~~l~~~~~f~~L~~~~~~~l~~~~~~~~~~~ge~l~~~g~~~~~~~~v~~G~v~~~~~~~~~~~~i~~~~~g~~~g~~~ 85 (236)
T PRK09392 6 LIRLRNLPLFADMADATFERLMRGAFLQRFPPGTMLITEGEPADFLFVVLDGLVELSASSQDRETTLAILRPVSTFILAA 85 (236)
T ss_pred HHHHhcCccccCCCHHHHHHHHhhcceeecCCCCEEEeCCCccceEEEEEeCEEEEEEcCCCceEEEEEeCCCchhhhHH
Confidence 35788999999999999999999999999999999999999999999999999999887677788899999999999999
Q ss_pred hhcCCCeeeEEEEccceEEEEeeHHHHHHHHHhchhhHHHHHHHHHHHHHcccchhhhhhhhhhHhhhhc
Q 006573 455 VLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKDPIMEGVLLETENMLAR 524 (640)
Q Consensus 455 l~~~~~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~rl~~ 524 (640)
++.+.|+.++++|.++|+++.+++++|.+++.++|.+...+...+..++.............+..+|++.
T Consensus 86 ~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rla~ 155 (236)
T PRK09392 86 VVLDAPYLMSARTLTRSRVLMIPAELVREAMSEDPGFMRAVVFELAGCYRGLVKSLKNQKLRSSAERLAN 155 (236)
T ss_pred HhCCCCCceEEEEcCceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999888777666666666777777663
No 12
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.65 E-value=2.1e-16 Score=157.91 Aligned_cols=257 Identities=15% Similarity=0.224 Sum_probs=178.8
Q ss_pred hhhHHhhhhccccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEeeC--CceEEEEEecCCCe
Q 006573 372 YLFYSLMDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKN--GVEQVVGEAKTGEI 449 (640)
Q Consensus 372 ~~~~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~--g~~~~~~~l~~G~~ 449 (640)
+.+..+|+++|+|.++|++.+.++++.++...|..|++|+++|+.++.+|+|.+|.|.+....+ ++++.+..+..||+
T Consensus 268 ~~~~~fLrsv~~~q~l~Ee~L~KiaD~le~~~Yd~g~yIirqge~G~~ffii~~G~V~vtq~~e~~~q~~~lr~l~kGd~ 347 (732)
T KOG0614|consen 268 EQYMNFLRSVPLFQNLPEELLLKIADVLEEEYYDAGEYIIRQGEKGDTFFIISKGTVKVTQQDEGSTQPQELRTLNKGDY 347 (732)
T ss_pred HHHHHHHHhhhhhccCCHHHHHHHHHHHHHHhhcCCceEEeecCCCCeEEEEecceEEEeecCCCCCchhHHhhccccch
Confidence 4567899999999999999999999999999999999999999999999999999999988543 45567889999999
Q ss_pred eechhhhcCCCeeeEEEEccc-eEEEEeeHHHHHHHHHhchhhHHHHHHHHHHHHHcc-----cchhhhhhhhhhHhh--
Q 006573 450 CGEIGVLCYRPQLFTVRTKRL-SQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDL-----KDPIMEGVLLETENM-- 521 (640)
Q Consensus 450 fGe~~l~~~~~~~~~~~a~~~-~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~~~~~~~~r-- 521 (640)
|||-+++....|++++.|.++ ++++.|+++.|.+++-...++.+.-...-..+.+.. .....+..+.+.+..
T Consensus 348 FGE~al~~edvRtAniia~~~gv~cl~lDresF~~liG~l~~l~ek~~~D~~r~A~~~~~~~~~~e~a~v~l~dl~~iaT 427 (732)
T KOG0614|consen 348 FGERALLGEDVRTANIIAQAPGVECLTLDRESFKKLIGDLEELKEKDYGDEERRASVVIKEDFAEEFAQVKLSDLKRIAT 427 (732)
T ss_pred hhHHHhhccCccchhhhccCCCceEEEecHHHHHHhcccHHHhhhhhccchhhhhhhHHHHHHHhhhcccchhhhhhhhh
Confidence 999999999999999999987 999999999999998777666543322222221110 000001111111111
Q ss_pred hhccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---ccch
Q 006573 522 LARGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---FYFK 598 (640)
Q Consensus 522 l~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---~~~~ 598 (640)
+..|-. ++..+.........-.++.+-+.. ..|..+..-. .+++.+.....+.-+|++..++. ..|.
T Consensus 428 LGvGgF-GRVELV~~~~~~~~fAlKilkK~h----IVdtkQqeHv-----~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm 497 (732)
T KOG0614|consen 428 LGVGGF-GRVELVKVNSQKATFALKILKKKH----IVDTKQQEHV-----FSERNIMMECRSDFIVRLYRTFRDSKYVYM 497 (732)
T ss_pred cccCcc-ceEEEEEecccchHHHHHHHhHhh----ccchhHHHHH-----HhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence 111100 011111111111122334443322 1111111111 22333444445678899988875 3447
Q ss_pred hhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 599 QHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 599 ~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
|+.||..| |++..|.+.|..-|...++...|++.||.|+|
T Consensus 498 LmEaClGG--ElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH 537 (732)
T KOG0614|consen 498 LMEACLGG--ELWTILRDRGSFDDYTARFYVACVLEAFEYLH 537 (732)
T ss_pred hHHhhcCc--hhhhhhhhcCCcccchhhhhHHHHHHHHHHHH
Confidence 99999999 99999999999999999999999999999998
No 13
>PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional
Probab=99.65 E-value=4.7e-15 Score=142.43 Aligned_cols=139 Identities=19% Similarity=0.322 Sum_probs=124.4
Q ss_pred ccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEe-eCCceEEEEEecCCCeeechhhhcCC-Cee
Q 006573 385 RGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVL-KNGVEQVVGEAKTGEICGEIGVLCYR-PQL 462 (640)
Q Consensus 385 ~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~-~~g~~~~~~~l~~G~~fGe~~l~~~~-~~~ 462 (640)
+.+|++.++.+...+....|++|++|+.+|++++.+|+|.+|.++++.. .+|++..+..+.+|++||+.+++.+. ++.
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~V~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~~~ 85 (211)
T PRK11753 6 KPQTDPTLEWFLSHCHIHKYPAKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERS 85 (211)
T ss_pred CCCCHHHHHHHHhhCeEEEeCCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehhhccCCCCce
Confidence 4689999999999999999999999999999999999999999999874 57888899999999999999988864 688
Q ss_pred eEEEEccceEEEEeeHHHHHHHHHhchhhHHHHHHHHHHHHHcccchhhhhhhhhhHhhhh
Q 006573 463 FTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKDPIMEGVLLETENMLA 523 (640)
Q Consensus 463 ~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~rl~ 523 (640)
++++|.++|+++.+++++|.++++++|++...+.+.+.+++.............+..+|++
T Consensus 86 ~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Rl~ 146 (211)
T PRK11753 86 AWVRAKTACEVAEISYKKFRQLIQVNPDILMALSAQMARRLQNTSRKVGDLAFLDVTGRIA 146 (211)
T ss_pred EEEEEcCcEEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhHHH
Confidence 8999999999999999999999999999999998888888877666655666666666665
No 14
>PRK10402 DNA-binding transcriptional activator YeiL; Provisional
Probab=99.57 E-value=1.6e-14 Score=139.92 Aligned_cols=132 Identities=15% Similarity=0.124 Sum_probs=113.0
Q ss_pred HHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEe-eCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccce
Q 006573 393 FQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVL-KNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLS 471 (640)
Q Consensus 393 ~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~-~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~ 471 (640)
.++...++...|++|++|+.+||+++.+|+|.+|.|+++.. .+|++.++..+.+|++||+.+++.+.+++++++|.++|
T Consensus 25 ~~i~~~~~~~~~~kge~l~~~G~~~~~~y~V~~G~v~v~~~~~~G~e~~~~~~~~g~~~G~~~~~~~~~~~~~~~A~~~~ 104 (226)
T PRK10402 25 FDVSADTELFHFLAREYIVQEGQQPSYLFYLTRGRAKLYATLANGKVSLIDFFAAPCFIGEIELIDKDHETKAVQAIEEC 104 (226)
T ss_pred HHHHhhhhheeeCCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEeeeeecCCCCeEEeehhhcCCCCCccEEEeccE
Confidence 34666788899999999999999999999999999999874 67889999999999999999999999999999999999
Q ss_pred EEEEeeHHHHHHHHHhchhhHHHHHHHHHHHHHcccchhhhhhhhhhHhhhhc
Q 006573 472 QLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKDPIMEGVLLETENMLAR 524 (640)
Q Consensus 472 ~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~rl~~ 524 (640)
+++.+++++|.+++..+|.+...+...+..++.............+.++|++.
T Consensus 105 ~i~~i~~~~~~~ll~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rla~ 157 (226)
T PRK10402 105 WCLALPMKDCRPLLLNDALFLRKLCKFLSHKNYRNIVSLTQNQSFPLENRLAA 157 (226)
T ss_pred EEEEEEHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHH
Confidence 99999999999999999999999988888776544433333333455566553
No 15
>KOG1420 consensus Ca2+-activated K+ channel Slowpoke, alpha subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.57 E-value=4.3e-16 Score=156.41 Aligned_cols=229 Identities=20% Similarity=0.290 Sum_probs=158.4
Q ss_pred EEcCCChhHHHHHHHHHHHHHHHHHHhhhheecccCC------CCCeeehhhHhhHHHhhhheeeeeEEEEeCCceEEEe
Q 006573 56 IVSPYDRRYRVWETYLVLLVIYTAWASPFEFGFLRKP------QRPLSVIDNVVNGFFAVDIILTFFVAYLDKATYLLVD 129 (640)
Q Consensus 56 ~~~P~s~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~~------~~~~~~i~~~~~~~f~~d~~l~f~t~~~~~~~~~~v~ 129 (640)
+|+-.+-..++.-++++++++-+.+++.+..++.... ...-..+|+.+.++|++-+++||..+ .
T Consensus 118 lisgqtltgr~lvvlvfilsigsliiyf~das~~~ve~cq~w~~~~tqqidlafnifflvyffirfiaa----------s 187 (1103)
T KOG1420|consen 118 LISGQTLTGRVLVVLVFILSIGSLIIYFIDASNPIVETCQNWYKDFTQQIDLAFNIFFLVYFFIRFIAA----------S 187 (1103)
T ss_pred eeecccccceeeehhHHHHhhhceEEEEEcCCChHHHhhhhhhhChHHHhhhHhhHHHHHHHHHHHhhc----------c
Confidence 4566666666666777777777777766665554332 12334689999999999999999765 2
Q ss_pred ChhHHHHHHhhhhhhhHhHhhccHHHHhhhCCCCccchhhhhHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHH
Q 006573 130 CPKQIAWKYASSWLVFDVISTIPSELAQKISPKPLQSYGLFNMLRLWRLRRVSALFSRLEKDRNYNYFWVRCCKLIFVTL 209 (640)
Q Consensus 130 ~~~~i~~~Yl~~~f~~Dlis~lP~~~~~~~~~~~~~~~~~l~~lrllrl~r~~~~~~~l~~~~~~~~~~~~l~~l~~~~~ 209 (640)
|. . +-.+.-+-++|++.+-|.++ ..+...++-.++++|.+|+..+..+.++++.++.... +++..++.+++
T Consensus 188 dk-l--wf~lemys~vdfftippsfv-siyl~r~wlglrflralrlmtvpdilqylnilktsss-----irl~qlvsifi 258 (1103)
T KOG1420|consen 188 DK-L--WFWLEMYSVVDFFTIPPSFV-SIYLNRSWLGLRFLRALRLMTVPDILQYLNILKTSSS-----IRLVQLVSIFI 258 (1103)
T ss_pred cc-e--eeeeehhhheeeeecCchhe-EEEeccchHHHHHHHHHHhccHHHHHHHHHHHhccch-----hhHHHHHHHHH
Confidence 21 1 11222223566666555443 3333333445566666666666666666665554322 57888777777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccccccccCCCccCcchHHHHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHH
Q 006573 210 FAVHCAGCFYYLLAARYHNPERTWIGASLGQNFLEKSLWIRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNL 289 (640)
Q Consensus 210 ~~~h~~ac~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~ 289 (640)
-++...|.+..+++. +++.|-+ + .++.--.|..|+|+.++||+||||||++..|..+++|.+|+++.|.
T Consensus 259 svwltaag~ihllen----sgdp~~~------f-~n~hrltyw~cvyfl~vtmstvgygdvyc~t~lgrlfmvffil~gl 327 (1103)
T KOG1420|consen 259 SVWLTAAGFIHLLEN----SGDPWEN------F-QNNHRLTYWECVYFLMVTMSTVGYGDVYCKTTLGRLFMVFFILGGL 327 (1103)
T ss_pred HHHHhhcceeehhhc----CCChhHh------c-cCcccchhhheeeeeEEEeeeccccceeehhhhhHHHHHHHHHHHH
Confidence 777777777776663 3444422 1 2233458999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhchhhHHHH
Q 006573 290 GLTAYLIGNMTNLVVHGTSRTRKFR 314 (640)
Q Consensus 290 ~~~a~~i~~i~~~~~~~~~~~~~~~ 314 (640)
.+||..++.|..++.+..+...+|+
T Consensus 328 amfasyvpeiielignr~kyggeyk 352 (1103)
T KOG1420|consen 328 AMFASYVPEIIELIGNRKKYGGEYK 352 (1103)
T ss_pred HHHHhhhHHHHHHHccccccCceee
Confidence 9999999999999988877666665
No 16
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=3.2e-15 Score=129.31 Aligned_cols=116 Identities=22% Similarity=0.161 Sum_probs=101.0
Q ss_pred hhhHhhhhccCCCCCcceeeeeecCCHHHHHHHHhc-CCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc
Q 006573 516 LETENMLARGRMDLPLSLCFAALRGDDLLLHQLLKR-GLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL 594 (640)
Q Consensus 516 ~~~~~rl~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 594 (640)
..........+-++=+|+|.|+..|+.++++.|+.+ |+|+|..+..|.|+| |.++..+..+++.+|+++|
T Consensus 59 sq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~L---------HyAagK~r~eIaqlLle~g 129 (226)
T KOG4412|consen 59 SQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCL---------HYAAGKGRLEIAQLLLEKG 129 (226)
T ss_pred hcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCccee---------hhhhcCChhhHHHHHHhcC
Confidence 333444444555667899999999999999999998 999999999999999 8888888999999999998
Q ss_pred c---------cchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 595 F---------YFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 595 ~---------~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
+ -+|||-||..|+.+++++|+..||.+|.+|+.|.|||+-|+...|
T Consensus 130 a~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~ 184 (226)
T KOG4412|consen 130 ALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGH 184 (226)
T ss_pred CCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccC
Confidence 4 448999999999999999999999999999999999998877665
No 17
>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]
Probab=99.55 E-value=5.6e-14 Score=143.00 Aligned_cols=176 Identities=14% Similarity=0.197 Sum_probs=141.3
Q ss_pred hHHhhhhccccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeech
Q 006573 374 FYSLMDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEI 453 (640)
Q Consensus 374 ~~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~ 453 (640)
..+++.++|+|+.++++.+.+|...+...+|.+||+|+..|.+...+|+|.+|.|++..+ +|. ++..+..||.||..
T Consensus 5 ~~~Fl~~~pPF~~L~~eel~~L~~~l~v~yy~kge~ii~~~~p~~~l~vi~kG~vev~~~-~g~--v~~~~~~gdlFg~~ 81 (610)
T COG2905 5 PDQFLQQHPPFSQLPAEELEQLMGALEVKYYRKGEIIIYAGSPVHYLYVIRKGVVEVRSD-GGE--VLDRLAAGDLFGFS 81 (610)
T ss_pred HHHHHhcCCCcccCCHHHHHHHHhhhccccccCCCeeecCCCCcceeEEEEeceeeEEcC-CCe--eeeeeccCccccch
Confidence 457889999999999999999999999999999999999999999999999999999873 343 89999999999999
Q ss_pred hhhcCCCeeeEEEEccceEEEEeeHHHHHHHHHhchhhHHHHHHHHHHHHHcccchhhhhhhhhh-HhhhhccCCCCCcc
Q 006573 454 GVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKDPIMEGVLLET-ENMLARGRMDLPLS 532 (640)
Q Consensus 454 ~l~~~~~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~rl~~g~~~l~~~ 532 (640)
+++++.+....+.|.++|.+|.|+++.|.++++++|++...+..++++|++...+...++...+. ..++.+- ....+
T Consensus 82 ~l~~~~~~~~~~~aeedsl~y~lp~s~F~ql~~~n~~f~~ff~~~~akR~~~~~~~~~eq~~~e~~~trv~~~--~~~~~ 159 (610)
T COG2905 82 SLFTELNKQRYMAAEEDSLCYLLPKSVFMQLMEENPEFADFFLRSLAKRLRDIADRLAEQGESEFILTRVGEV--KTLPA 159 (610)
T ss_pred hhcccCCCcceeEeeccceEEecCHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHH--hcCCC
Confidence 99999888889999999999999999999999999999999999999999876665555421111 1222211 11111
Q ss_pred eeeeeecCCHHHHHHHHhcCCC
Q 006573 533 LCFAALRGDDLLLHQLLKRGLD 554 (640)
Q Consensus 533 l~~a~~~g~~~~v~~Ll~~g~~ 554 (640)
+.......-.++.+.+.+.|.+
T Consensus 160 ~~v~~~~~i~~aa~km~~~gv~ 181 (610)
T COG2905 160 VTVSPQASIQDAARKMKDEGVS 181 (610)
T ss_pred cccCccCcHHHHHHHHHhcCCC
Confidence 2222233344677777777776
No 18
>cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of
Probab=99.55 E-value=5.5e-14 Score=120.35 Aligned_cols=113 Identities=31% Similarity=0.518 Sum_probs=105.1
Q ss_pred ccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEe-eCCceEEEEEecCCCeeechhhhcCCCe
Q 006573 383 LFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVL-KNGVEQVVGEAKTGEICGEIGVLCYRPQ 461 (640)
Q Consensus 383 ~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~-~~g~~~~~~~l~~G~~fGe~~l~~~~~~ 461 (640)
+|+.++++.+..++..++...+++|++|+.+|++.+.+|+|.+|.+++... ++|++..+..+.+|++||+..++.+.++
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~~~~~~~~~~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~ 80 (115)
T cd00038 1 LFSGLDDEELEELADALEERRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDEDGREQIVGFLGPGDLFGELALLGNGPR 80 (115)
T ss_pred CcccCCHHHHHHHHhhceeeeeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEecCCccCcChHHHhcCCCC
Confidence 478899999999999999999999999999999999999999999999874 5677788999999999999999988899
Q ss_pred eeEEEEccceEEEEeeHHHHHHHHHhchhhHHHH
Q 006573 462 LFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTII 495 (640)
Q Consensus 462 ~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~~ 495 (640)
..+++|.++|+++.|++++|.++++++|++...+
T Consensus 81 ~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 114 (115)
T cd00038 81 SATVRALTDSELLVLPRSDFRRLLQEYPELARRL 114 (115)
T ss_pred CceEEEcCceEEEEEeHHHHHHHHHHCcHhHHhc
Confidence 9999999999999999999999999999877654
No 19
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.55 E-value=6.6e-13 Score=152.37 Aligned_cols=109 Identities=21% Similarity=0.064 Sum_probs=94.0
Q ss_pred ccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcc----------------------cccccc
Q 006573 524 RGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSE----------------------FFSIPI 581 (640)
Q Consensus 524 ~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~----------------------~~~~~~ 581 (640)
..+..+.+++|.|+..|+.++++.|+++|+|+|.+|.+|+||||+|+..+.. |.|+..
T Consensus 553 ~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~ 632 (823)
T PLN03192 553 IGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKR 632 (823)
T ss_pred CCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHh
Confidence 3455678999999999999999999999999999999999999977653321 356777
Q ss_pred cchhHHHHHHhhc---------ccchhhHhhcCCCHHHHHHHHhccCCCCCCCccc-ceee
Q 006573 582 SCNNVIKFLLFNL---------FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLV-TKYI 632 (640)
Q Consensus 582 ~~~~~~~~L~~~~---------~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g-~~~~ 632 (640)
++.++++.|+++| +.+|||.|+..|+.+++++|+++|||+|.+|..| .+|.
T Consensus 633 g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~ 693 (823)
T PLN03192 633 NDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPT 693 (823)
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHH
Confidence 8899999999986 5669999999999999999999999999999988 5553
No 20
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins. The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....
Probab=99.55 E-value=8.3e-15 Score=139.30 Aligned_cols=188 Identities=24% Similarity=0.367 Sum_probs=126.6
Q ss_pred ehhhHhhHHHhhhheeeeeEEEEeCCceEEEeChhHHHHHHhhh-hhhhHhHhhccHHHHhhhCCCCc----cchhhhhH
Q 006573 98 VIDNVVNGFFAVDIILTFFVAYLDKATYLLVDCPKQIAWKYASS-WLVFDVISTIPSELAQKISPKPL----QSYGLFNM 172 (640)
Q Consensus 98 ~i~~~~~~~f~~d~~l~f~t~~~~~~~~~~v~~~~~i~~~Yl~~-~f~~Dlis~lP~~~~~~~~~~~~----~~~~~l~~ 172 (640)
++|.+++++|++|+++++.+.. ++ +++|+++ |+++|+++++|..+......... ...+++++
T Consensus 1 ~~~~~~~~~f~~e~~l~~~~~~-----------~~--~~~y~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (200)
T PF00520_consen 1 ILEIIFDVIFILEIVLRFFALG-----------FK--RRRYFRSWWNWFDFISVIPSIVSVILRSYGSASAQSLLRIFRL 67 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCC-----------CG---GCCCCSHHHHHHHHHHHHHCCHHCCHCSS--HHCHCHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHhc-----------cH--HHHHhcChhhcccccccccccccccccccccccccceEEEEEe
Confidence 3689999999999999997541 11 4789977 56899999999865443322111 13445555
Q ss_pred HHHHHHHHHHHHHHHHHhhhc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCccCcchHHHH
Q 006573 173 LRLWRLRRVSALFSRLEKDRN-YNYFWVRCCKLIFVTLFAVHCAGCFYYLLAARYHNPERTWIGASLGQNFLEKSLWIRY 251 (640)
Q Consensus 173 lrllrl~r~~~~~~~l~~~~~-~~~~~~~l~~l~~~~~~~~h~~ac~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~y 251 (640)
+|++|+.|+.+.++.++.... ......++.+++..++++.|++||+++.+..........+.... ..+....+.+++|
T Consensus 68 l~~~R~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~lf~~~~~~~~~~~~~~-~~~~~~~~~f~~~ 146 (200)
T PF00520_consen 68 LRLLRLLRLLRRFRSLRRLLRALIRSFPDLFKFILLLFIVLLFFACIGYQLFGGSDNSCCDPTWDS-ENDIYGYENFDSF 146 (200)
T ss_dssp HHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS-------SS-----SSTHHHHSSH
T ss_pred eccccccccccccccccccccccccccccccccccccccccccccchhheeccccccccccccccc-ccccccccccccc
Confidence 555555555544443333211 11223467888888999999999999988753322221111111 1334567788999
Q ss_pred HHHHHhhhhhhcccccCCcccC-----CchhhHHH-HHHHHHHHHHHHHHHHHH
Q 006573 252 VTSMYWSITTLTTVGYGDLHPV-----NTREMVFD-ILFMLFNLGLTAYLIGNM 299 (640)
Q Consensus 252 ~~s~yw~~~t~ttvGygd~~p~-----t~~e~~~~-i~~~i~g~~~~a~~i~~i 299 (640)
..|+||++.++||.|+||..|. +..+.++. ++..+.+++++++++|.|
T Consensus 147 ~~s~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~nlliavi 200 (200)
T PF00520_consen 147 GESLYWLFQTMTGEGWGDVMPSCMSARSWLAVIFFISFIIIVSILLLNLLIAVI 200 (200)
T ss_dssp HHHHHHHHHHHTTTTCCCCHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCccccccccccccchhHhHHhhhhhhhHHHHHHHHHHhcC
Confidence 9999999999999999999987 88899988 777777778899998875
No 21
>PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional
Probab=99.54 E-value=1e-13 Score=135.41 Aligned_cols=146 Identities=14% Similarity=0.117 Sum_probs=123.2
Q ss_pred hhhccccccCCHHHHHHHHhcccc-ccccCCCeEEEeCCCCCeEEEEEeceEEEEEe-eCCceEEEEEecCCCeeechhh
Q 006573 378 MDKVYLFRGVSNDLLFQLVSEMKA-EYFPPKEDVILQNEAPTDFYILVTGAVDLLVL-KNGVEQVVGEAKTGEICGEIGV 455 (640)
Q Consensus 378 l~~~~~f~~ls~~~l~~l~~~~~~-~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~-~~g~~~~~~~l~~G~~fGe~~l 455 (640)
+++.+.|..+++++++.+...... ..|++|++|+.+||+++.+|+|.+|.|+++.. .+|++.++..+.+|++||+.++
T Consensus 15 ~~~~~~~~~l~~~~l~~L~~~~~~~~~~~kge~l~~~Gd~~~~ly~v~~G~v~~~~~~~~G~e~i~~~~~~gd~~g~~~~ 94 (235)
T PRK11161 15 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI 94 (235)
T ss_pred ccccccccCCCHHHHHHHHHhhhhceeecCCCEeECCCCCcceEEEEeeceEEEEEECCCCCEEEEEeccCCceeccccc
Confidence 444555557999999999988864 67999999999999999999999999999884 6788889999999999998776
Q ss_pred hcCCCeeeEEEEccceEEEEeeHHHHHHHHHhchhhHHHHHHHHHHHHHcccchhhhhhhhhhHhhhhc
Q 006573 456 LCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKDPIMEGVLLETENMLAR 524 (640)
Q Consensus 456 ~~~~~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~rl~~ 524 (640)
+.+ +...+++|.++|+++.++++.|.+++.++|++...+.+.+..++.............+.++|++.
T Consensus 95 ~~~-~~~~~~~a~~~~~i~~ip~~~f~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rla~ 162 (235)
T PRK11161 95 GSG-QHPSFAQALETSMVCEIPFETLDDLSGKMPKLRQQIMRLMSGEIKGDQEMILLLSKKNAEERLAA 162 (235)
T ss_pred cCC-CCcceEEEeccEEEEEEEHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 544 45568999999999999999999999999999999999998888766555555555666666653
No 22
>COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
Probab=99.53 E-value=1.4e-13 Score=132.47 Aligned_cols=146 Identities=21% Similarity=0.318 Sum_probs=126.8
Q ss_pred hhccccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEe-eCCceEEEEEecCCCeeechhhhc
Q 006573 379 DKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVL-KNGVEQVVGEAKTGEICGEIGVLC 457 (640)
Q Consensus 379 ~~~~~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~-~~g~~~~~~~l~~G~~fGe~~l~~ 457 (640)
...+.|...+++....+........+++|++|+.+||+++.+|+|.+|.++++.. .+|++.++..+++|++||+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~fg~~~l~~ 82 (214)
T COG0664 3 KENPLLNLLPSELLELLALKLEVRKLPKGEVLFTEGEEADSLYIILSGIVKLYANTEDGREIILGFLGPGDFFGELALLG 82 (214)
T ss_pred ccccccccCCHHHHHHHhhhceeEeeCCCCEEEcCCCcCceEEEEEEeEEEEEEECCCCcEEEEEEecCCchhhhHHHhc
Confidence 3456666678888888888889999999999999999999999999999999885 668889999999999999999999
Q ss_pred CCCeeeEEEEccceEEEEeeHHHHHHHHHhchhhHHHHHHHHHHHHHcccchhhhhhhhhhHhhhhc
Q 006573 458 YRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKDPIMEGVLLETENMLAR 524 (640)
Q Consensus 458 ~~~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~rl~~ 524 (640)
+.|+.++++|.++|+++.++++.|.+++.++|.+...+...+..++.............+..++++.
T Consensus 83 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~r~~~ 149 (214)
T COG0664 83 GDPRSASAVALTDVEVLEIPRKDFLELLAESPKLALALLRLLARRLRQALERLSLLARKDVEERLAR 149 (214)
T ss_pred CCCccceEEEcceEEEEEecHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 8899999999999999999999999998888999999999999988877665555555555555553
No 23
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=99.50 E-value=4.2e-14 Score=135.80 Aligned_cols=184 Identities=23% Similarity=0.340 Sum_probs=140.5
Q ss_pred hHHhhhhccccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeech
Q 006573 374 FYSLMDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEI 453 (640)
Q Consensus 374 ~~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~ 453 (640)
..+.+++.-+|++++++.+.++...|.+..++.|+.|+.||+.++.+|+|.+|+++++.. |+ .+..+.+|..|||+
T Consensus 120 L~~a~r~~~LF~~Ld~eq~~~v~dam~~~~v~~G~~Vi~qGdeGd~fYvI~kGt~dVyv~--~~--~v~~~~~g~sFGEl 195 (368)
T KOG1113|consen 120 LEEAFRKNLLFANLDDEQLSQVLDAMFEKRVKAGETVIKQGDEGDNFYVIDKGTFDVYVN--GT--YVTTYSPGGSFGEL 195 (368)
T ss_pred HHHHHHhccccccCCHHHHHHHHHhhceeeecCCcEEEecCCcCCcEEEEecceEEEEEC--Ce--EEeeeCCCCchhhh
Confidence 445777889999999999999999999999999999999999999999999999999983 43 68899999999999
Q ss_pred hhhcCCCeeeEEEEccceEEEEeeHHHHHHHHHhchhhHHHHHHHHHHHHHcccc--hhhhhh---------hhhhHhhh
Q 006573 454 GVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKD--PIMEGV---------LLETENML 522 (640)
Q Consensus 454 ~l~~~~~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~---------~~~~~~rl 522 (640)
+++.+.||.+|+.|++++.+|.|++..|.+++..+.....+++....+...-+.. ...... ..+++...
T Consensus 196 ALmyn~PRaATv~a~t~~klWgldr~SFrrIi~~s~~kkrkMy~~~l~s~pil~~l~k~er~kv~dal~~k~y~~G~~Vi 275 (368)
T KOG1113|consen 196 ALMYNPPRAATVVAKSLKKLWGLDRTSFRRIIMKSCIKKRKMYEPFLESVPILESLEKLERAKVADALGTKSYKDGERVI 275 (368)
T ss_pred HhhhCCCcccceeeccccceEEEeeceeEEEeeccchhhhhhhhhhhhcchhhHHHHHHHHHhhhcccceeeccCCceEE
Confidence 9999999999999999999999999999999999988888888887765443321 111111 12222223
Q ss_pred hccCCCCCcceeeeeecCCHHHHHHHHhcCC--CCCCCCCCCCccc
Q 006573 523 ARGRMDLPLSLCFAALRGDDLLLHQLLKRGL--DPNESDNNGRTAL 566 (640)
Q Consensus 523 ~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~--~~n~~d~~g~t~L 566 (640)
.+|. ....++....|..++.+.- .|. .....|..|.-+|
T Consensus 276 ~qg~---~ge~f~~i~eGEvdv~~~~--~~v~vkl~~~dyfge~al 316 (368)
T KOG1113|consen 276 VQGD---QGEHFYIIEEGEVDVLKKR--DGVEVKLKKGDYFGELAL 316 (368)
T ss_pred eccC---CcceEEEecccccchhhcc--CCeEEEechhhhcchHHH
Confidence 3333 3344567777877776544 221 1223455565555
No 24
>PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ]. The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B ....
Probab=99.49 E-value=1.9e-13 Score=111.86 Aligned_cols=89 Identities=29% Similarity=0.474 Sum_probs=83.2
Q ss_pred ccccCCCeEEEeCCCCCeEEEEEeceEEEEEe-eCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccceEEEEeeHHH
Q 006573 402 EYFPPKEDVILQNEAPTDFYILVTGAVDLLVL-KNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLLRLNRTT 480 (640)
Q Consensus 402 ~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~-~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~~i~~~~ 480 (640)
+.|++|++|+++|+..+.+|+|++|.+++... .+|+...+..+.+|++||+.+++.+.++.++++|.++|+++.|++++
T Consensus 2 ~~~~~g~~i~~~g~~~~~~~~i~~G~v~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~~i~~~~ 81 (91)
T PF00027_consen 2 KTYKKGEVIYRQGDPCDHIYIILSGEVKVSSINEDGKEQIIFFLGPGDIFGEIELLTGKPSPFTVIALTDSEVLRIPRED 81 (91)
T ss_dssp EEESTTEEEEETTSBESEEEEEEESEEEEEEETTTSEEEEEEEEETTEEESGHHHHHTSBBSSEEEESSSEEEEEEEHHH
T ss_pred eEECCCCEEEeCCCcCCEEEEEEECceEEEeceecceeeeecceeeeccccceeecCCCccEEEEEEccCEEEEEEeHHH
Confidence 57999999999999999999999999999886 55656678999999999999999999999999999999999999999
Q ss_pred HHHHHHhchh
Q 006573 481 FLNIVQANVG 490 (640)
Q Consensus 481 f~~ll~~~~~ 490 (640)
|.++++++|+
T Consensus 82 ~~~~~~~~p~ 91 (91)
T PF00027_consen 82 FLQLLQQDPE 91 (91)
T ss_dssp HHHHHHHSHH
T ss_pred HHHHHHhCcC
Confidence 9999999985
No 25
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.47 E-value=2.1e-14 Score=143.86 Aligned_cols=128 Identities=18% Similarity=0.281 Sum_probs=113.1
Q ss_pred HHhhhHHhhhhccccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCe
Q 006573 370 SHYLFYSLMDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEI 449 (640)
Q Consensus 370 ~~~~~~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~ 449 (640)
...+..+.+....+++++..++++++..+|.+..|.+|+.|+++||+++.+|++..|.++|.. +|+ .++..++|..
T Consensus 148 ~k~lI~dAi~~NdFLknLd~~Qi~e~v~~Myp~~~~~gs~IIrege~Gs~~yV~aeG~~~V~~--~g~--ll~~m~~gtv 223 (732)
T KOG0614|consen 148 AKQLIRDAIQKNDFLKNLDASQIKELVDCMYPVEYRAGSWIIREGEPGSHLYVSAEGELQVSR--EGK--LLGKMGAGTV 223 (732)
T ss_pred HHHHHHHHHHhhHHHHhhhHHHHHHHHHhhCcccccCCcEEEecCCCCceEEEeecceEEEee--CCe--eeeccCCchh
Confidence 346677888889999999999999999999999999999999999999999999999999986 443 7999999999
Q ss_pred eechhhhcCCCeeeEEEEccceEEEEeeHHHHHHHHHhchhhHHHHHHHHHH
Q 006573 450 CGEIGVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQ 501 (640)
Q Consensus 450 fGe~~l~~~~~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~ 501 (640)
|||++++.+.+|+++++|++++++|.|+|+.|+.+|.........-..+++.
T Consensus 224 FGELAILynctRtAsV~alt~~~lWaidR~vFq~IM~~tg~~r~~~~~~fLr 275 (732)
T KOG0614|consen 224 FGELAILYNCTRTASVRALTDVRLWAIDREVFQAIMMRTGLERHEQYMNFLR 275 (732)
T ss_pred hhHHHHHhCCcchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998765544433333333
No 26
>smart00100 cNMP Cyclic nucleotide-monophosphate binding domain. Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases.
Probab=99.45 E-value=1.3e-12 Score=112.47 Aligned_cols=114 Identities=27% Similarity=0.477 Sum_probs=103.3
Q ss_pred ccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEe-eCCceEEEEEecCCCeeechhhh--cCC
Q 006573 383 LFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVL-KNGVEQVVGEAKTGEICGEIGVL--CYR 459 (640)
Q Consensus 383 ~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~-~~g~~~~~~~l~~G~~fGe~~l~--~~~ 459 (640)
+|.+++++.+++++..++...+++|++|+++|++.+.+|+|.+|.+++... .+|++..+..+.+|++||+.+++ ...
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~ 80 (120)
T smart00100 1 LFKNLDAEELRELADALEPVRYPAGEVIIRQGDVGDSFYIILSGEVRVYKVLEDGREQILGILGPGDFFGELALLTNSRR 80 (120)
T ss_pred CcCCCCHHHHHHHHHhceEEEeCCCCEEEeCCCcCCcEEEEEeeEEEEEEECCCCceEEEEeecCCceechhhhccCCCc
Confidence 478899999999999999999999999999999999999999999999875 56778889999999999999988 456
Q ss_pred CeeeEEEEccceEEEEeeHHHHHHHHHhchhhHHHHH
Q 006573 460 PQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIM 496 (640)
Q Consensus 460 ~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~~~ 496 (640)
+...++.|.++|+++.++.+.+.+.+..++.....+.
T Consensus 81 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 117 (120)
T smart00100 81 AASATAVALELATLLRIDFRDFLQLLQENPQLLLELL 117 (120)
T ss_pred ccceEEEEEeeEEEEccCHHHHHHHHHHhHHHHHHHH
Confidence 7889999999999999999999999999888765544
No 27
>TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial. Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C.
Probab=99.45 E-value=7.7e-13 Score=125.09 Aligned_cols=117 Identities=13% Similarity=0.195 Sum_probs=103.4
Q ss_pred CCeEEEeCCCCCeEEEEEeceEEEEE-eeCCceEEEEEecCCCeeechhhhcCCC--eeeEEEEccceEEEEeeHHHHHH
Q 006573 407 KEDVILQNEAPTDFYILVTGAVDLLV-LKNGVEQVVGEAKTGEICGEIGVLCYRP--QLFTVRTKRLSQLLRLNRTTFLN 483 (640)
Q Consensus 407 ge~i~~~g~~~~~ly~I~~G~v~v~~-~~~g~~~~~~~l~~G~~fGe~~l~~~~~--~~~~~~a~~~~~v~~i~~~~f~~ 483 (640)
|+.|+.+||+++.+|+|.+|.|+++. .++|++.++..+.+|++||+.+++.+.+ +.++++|.++|+++.+++++|.+
T Consensus 1 g~~l~~~g~~~~~~~~i~~G~v~~~~~~~~G~e~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~~~~~v~~i~~~~~~~ 80 (193)
T TIGR03697 1 GKTIFFPGDPAEKVYFLRRGAVKLSRVYESGEEITVALLRENSVFGVLSLITGHRSDRFYHAVAFTRVELLAVPIEQVEK 80 (193)
T ss_pred CCceecCCCCCCcEEEEEecEEEEEEeCCCCcEeeeEEccCCCEeeeeeeccCCCCccceEEEEecceEEEEeeHHHHHH
Confidence 78999999999999999999999987 4678888999999999999999998775 45789999999999999999999
Q ss_pred HHHhchhhHHHHHHHHHHHHHcccchhhhhhhhhhHhhhh
Q 006573 484 IVQANVGDGTIIMNNLLQHLKDLKDPIMEGVLLETENMLA 523 (640)
Q Consensus 484 ll~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~rl~ 523 (640)
++.++|.+...+++.+..++.............+.++|++
T Consensus 81 l~~~~p~l~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rla 120 (193)
T TIGR03697 81 AIEEDPDLSMLLLQGLSSRILQTEMMIETLAHRDMGSRLV 120 (193)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999999988877665555556667777766
No 28
>PRK09391 fixK transcriptional regulator FixK; Provisional
Probab=99.43 E-value=1.3e-12 Score=126.73 Aligned_cols=128 Identities=14% Similarity=0.113 Sum_probs=110.4
Q ss_pred HHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEE-eeCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccceE
Q 006573 394 QLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLV-LKNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQ 472 (640)
Q Consensus 394 ~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~-~~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~ 472 (640)
.+...+....|++|++|+.+||+++.+|+|.+|.|+++. .++|++.++..+.+|++||+. .+.++.++++|.++|+
T Consensus 33 ~~~~~~~~~~~~kge~l~~~Gd~~~~ly~I~~G~vkl~~~~~~G~e~i~~~~~~Gd~fG~~---~~~~~~~~~~A~~ds~ 109 (230)
T PRK09391 33 HAGLVASEFSYKKGEEIYGEGEPADYVYQVESGAVRTYRLLSDGRRQIGAFHLPGDVFGLE---SGSTHRFTAEAIVDTT 109 (230)
T ss_pred cccceeeeEEECCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCceeccc---CCCcCCeEEEEcCceE
Confidence 345667889999999999999999999999999999987 467888889999999999964 4667889999999999
Q ss_pred EEEeeHHHHHHHHHhchhhHHHHHHHHHHHHHcccchhhhhhhhhhHhhhhc
Q 006573 473 LLRLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKDPIMEGVLLETENMLAR 524 (640)
Q Consensus 473 v~~i~~~~f~~ll~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~rl~~ 524 (640)
++.++.++|.+++.++|++...+...+..++....+........+.++|++.
T Consensus 110 v~~i~~~~f~~l~~~~p~l~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~ 161 (230)
T PRK09391 110 VRLIKRRSLEQAAATDVDVARALLSLTAGGLRHAQDHMLLLGRKTAMERVAA 161 (230)
T ss_pred EEEEEHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999999999999999999999999888776655555555666666653
No 29
>PRK13918 CRP/FNR family transcriptional regulator; Provisional
Probab=99.34 E-value=9.4e-12 Score=118.55 Aligned_cols=119 Identities=17% Similarity=0.220 Sum_probs=98.1
Q ss_pred ccccccccCCCeEEEeCC--CCCeEEEEEeceEEEEEe-eCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccceEEE
Q 006573 398 EMKAEYFPPKEDVILQNE--APTDFYILVTGAVDLLVL-KNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLL 474 (640)
Q Consensus 398 ~~~~~~~~~ge~i~~~g~--~~~~ly~I~~G~v~v~~~-~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~ 474 (640)
.++...|++|++|+.+|| +++.+|+|++|.|+++.. .+|++.++..+.|||+||+.+++ +.++++++.|.++|+++
T Consensus 5 ~~~~~~~~kg~~l~~~Gd~~~~~~~y~I~~G~vr~~~~~~~G~e~~l~~~~~Gd~~G~~~~~-~~~~~~~~~A~~~~~v~ 83 (202)
T PRK13918 5 VVDTVTYRPGAVILYPGVPGPSDMLYRVRSGLVRLHTVDDEGNALTLRYVRPGEYFGEEALA-GAERAYFAEAVTDSRID 83 (202)
T ss_pred ccceeEecCCCEEEcCCCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCeechHHhc-CCCCCceEEEcCceEEE
Confidence 356788999999999999 779999999999999884 78999999999999999997654 57788999999999999
Q ss_pred EeeHHHHHHHHHhchhhHHHHHHHHHHHHHcccchhhhhhhhhhHhhhh
Q 006573 475 RLNRTTFLNIVQANVGDGTIIMNNLLQHLKDLKDPIMEGVLLETENMLA 523 (640)
Q Consensus 475 ~i~~~~f~~ll~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~rl~ 523 (640)
.|+++.| +|+....+...+..++.............+..+|++
T Consensus 84 ~i~~~~~------~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~Rla 126 (202)
T PRK13918 84 VLNPALM------SAEDNLVLTQHLVRTLARAYESIYRLVGQRLKNRIA 126 (202)
T ss_pred EEEHHHc------ChhhHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 9999987 577777888888777766554444445555555555
No 30
>PHA02791 ankyrin-like protein; Provisional
Probab=99.34 E-value=8.7e-13 Score=130.49 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=84.6
Q ss_pred CCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCC-CcccccccccCcccccccccchhHHHHHHhhc--------ccc
Q 006573 527 MDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNG-RTALVCLTHFNSEFFSIPISCNNVIKFLLFNL--------FYF 597 (640)
Q Consensus 527 ~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g-~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~--------~~~ 597 (640)
..+.+|+++|+..|+.++++.|+.+|+++|.++..| .||| ++|+..++.++|++|++++ +.+
T Consensus 92 ~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL---------~~Aa~~g~~eivk~LL~~~~~~~d~~~g~T 162 (284)
T PHA02791 92 DKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSF---------YHAVMLNDVSIVSYFLSEIPSTFDLAILLS 162 (284)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHH---------HHHHHcCCHHHHHHHHhcCCcccccccCcc
Confidence 355678888888888888888888888888888777 4788 6677777888999998763 357
Q ss_pred hhhHhhcCCCHHHHHHHHhccCCCCCCCccccee-eeeeccc
Q 006573 598 KQHIAASKGSENCVLLLLDYEADPNSIGMLVTKY-IIRFFGF 638 (640)
Q Consensus 598 ~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~-~~~~~~~ 638 (640)
|||+|+..|+.+++++|+++|||+|.+|..|.+| |+.|...
T Consensus 163 pLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~ 204 (284)
T PHA02791 163 CIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDN 204 (284)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHc
Confidence 9999999999999999999999999999999887 7766544
No 31
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.34 E-value=1.1e-12 Score=135.47 Aligned_cols=111 Identities=20% Similarity=0.069 Sum_probs=98.2
Q ss_pred hhhccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCC-CCCCcccccccccCcccccccccchhHHHHHHhhc-----
Q 006573 521 MLARGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESD-NNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL----- 594 (640)
Q Consensus 521 rl~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d-~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~----- 594 (640)
.+.+.+.+..+.+|+|+.+++.++++.|+.+|+|+|..+ .-|.||| |+|+-.|+..+|.+|+++|
T Consensus 70 ~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPL---------HWAar~G~~~vv~lLlqhGAdpt~ 140 (600)
T KOG0509|consen 70 SVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPL---------HWAARNGHISVVDLLLQHGADPTL 140 (600)
T ss_pred CCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcc---------hHHHHcCcHHHHHHHHHcCCCCce
Confidence 344455577888999999999999999999999999988 6789999 8888889999999999997
Q ss_pred ----ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 595 ----FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 595 ----~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
|..++|.||..|+.-.|.+|+.+|+|+|.+|++|+||+++|.-.+|
T Consensus 141 ~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~ 190 (600)
T KOG0509|consen 141 KDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGF 190 (600)
T ss_pred ecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcc
Confidence 4458999999999999999999999999999999999999875543
No 32
>PF07885 Ion_trans_2: Ion channel; InterPro: IPR013099 This entry includes the two membrane helix type ion channels found in bacteria []. ; PDB: 1KKD_A 2A0L_A 1ORQ_C 3UKM_C 1LNQ_E 3OUS_A 3LDC_A 3LDD_A 3RBZ_A 3LDE_A ....
Probab=99.33 E-value=7.7e-12 Score=98.81 Aligned_cols=77 Identities=27% Similarity=0.581 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccccCCCccCcchHHHHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHH
Q 006573 208 TLFAVHCAGCFYYLLAARYHNPERTWIGASLGQNFLEKSLWIRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLF 287 (640)
Q Consensus 208 ~~~~~h~~ac~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~ 287 (640)
++++.+..+++++.+.. . +...+|.+|+||+++|+||+||||+.|.++.+|+++++.+++
T Consensus 2 ~~~~~l~~~~~~~~~~~-------------------~-~~~~~~~da~yfs~~t~tTvGyGDi~p~t~~gr~~~~~~~~~ 61 (79)
T PF07885_consen 2 ILLLVLAFGAIFFYISE-------------------G-SEKWSFIDALYFSFVTITTVGYGDIVPQTPAGRIFTIIYMLI 61 (79)
T ss_dssp HHHHHHHHHHHHHHHTT-------------------S-SSTTSHHHHHHHHHHHHTT---SSSSTSSHHHHHHHHHHHHH
T ss_pred EEEeeeHHHHHHHHHHH-------------------h-cccCCHHHHHHHHHHHHhcccCCCccCCccchHHHHHHHHHH
Confidence 34566777888887721 1 113478899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 006573 288 NLGLTAYLIGNMTNLVV 304 (640)
Q Consensus 288 g~~~~a~~i~~i~~~~~ 304 (640)
|+.++++.++.+++.+.
T Consensus 62 G~~~~~~~~~~~~~~l~ 78 (79)
T PF07885_consen 62 GIFLFALFLSVLASVLT 78 (79)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999988765
No 33
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.30 E-value=1.5e-12 Score=134.67 Aligned_cols=99 Identities=24% Similarity=0.209 Sum_probs=91.6
Q ss_pred eeeeeecCCHHHHHHHHhc-CCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccc----------hhhH
Q 006573 533 LCFAALRGDDLLLHQLLKR-GLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYF----------KQHI 601 (640)
Q Consensus 533 l~~a~~~g~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~----------~~h~ 601 (640)
++.|+..|..+.++.+++. |.++|..|.+|-|+| |||+..+..+++++|+++||.+ |||+
T Consensus 48 ~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlL---------HWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHW 118 (600)
T KOG0509|consen 48 IVKATQYGELETVKELVESEGESVNNPDREGVTLL---------HWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHW 118 (600)
T ss_pred hhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccce---------eHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchH
Confidence 4568999999999999998 999999999999999 9999999999999999997544 8999
Q ss_pred hhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 602 AASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 602 a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
||.+|+..+|.+|++|||||+.+|.+|-+||+-|.-+.|
T Consensus 119 Aar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~ 157 (600)
T KOG0509|consen 119 AARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGH 157 (600)
T ss_pred HHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCc
Confidence 999999999999999999999999999999998876655
No 34
>PLN02868 acyl-CoA thioesterase family protein
Probab=99.29 E-value=2.3e-11 Score=128.32 Aligned_cols=117 Identities=13% Similarity=0.069 Sum_probs=104.1
Q ss_pred HHhhhhccccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEe-eCCceEEEEEecCCCeeech
Q 006573 375 YSLMDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVL-KNGVEQVVGEAKTGEICGEI 453 (640)
Q Consensus 375 ~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~-~~g~~~~~~~l~~G~~fGe~ 453 (640)
.++++++++|+.++++.++++...++...|++||+|+++||..+.+|+|.+|.|+++.. .+| +.++..+++|++||+.
T Consensus 7 ~~~L~~~~~F~~L~~~~l~~l~~~~~~~~~~~Ge~I~~~Gd~~~~lyiI~~G~V~v~~~~~~g-e~~l~~l~~Gd~fG~~ 85 (413)
T PLN02868 7 VEFLGSVPLLQRLPSSSLKKIAEVVVPKRYGKGEYVVREGEPGDGLYFIWKGEAEVSGPAEEE-SRPEFLLKRYDYFGYG 85 (413)
T ss_pred HHHHhcCcccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeCEEEEEEECCCC-cEEEEEeCCCCEeehh
Confidence 35678899999999999999999999999999999999999999999999999999885 345 6788899999999975
Q ss_pred hhhcCCCeeeEEEEccceEEEEeeHHHHHHHHHhchhhHHH
Q 006573 454 GVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTI 494 (640)
Q Consensus 454 ~l~~~~~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~ 494 (640)
+.+.++.++++|.++|+++.|+++.|..+...++-...+
T Consensus 86 --l~~~~~~~~~~A~~d~~v~~ip~~~~~~~~~~~~~~~~~ 124 (413)
T PLN02868 86 --LSGSVHSADVVAVSELTCLVLPHEHCHLLSPKSIWDSDK 124 (413)
T ss_pred --hCCCCcccEEEECCCEEEEEEcHHHHhhhcccccccccC
Confidence 678889999999999999999999998887766544433
No 35
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.28 E-value=2.4e-12 Score=127.25 Aligned_cols=99 Identities=21% Similarity=0.177 Sum_probs=87.9
Q ss_pred CcceeeeeecCCHHHHHHHHhcCCCCCCCC----CCCCcccccccccCcccccccccchhHHHHHHhhc----------c
Q 006573 530 PLSLCFAALRGDDLLLHQLLKRGLDPNESD----NNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL----------F 595 (640)
Q Consensus 530 ~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d----~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~----------~ 595 (640)
.++++.|+..|+.++++.|+++|+|+|.+| ..|.||| |+|+..++.+++++|+++| +
T Consensus 34 ~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpL---------h~Aa~~~~~eivklLL~~GADVN~~~~~~g 104 (300)
T PHA02884 34 ANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPL---------IYAIDCDNDDAAKLLIRYGADVNRYAEEAK 104 (300)
T ss_pred CHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHH---------HHHHHcCCHHHHHHHHHcCCCcCcccCCCC
Confidence 345666788899999999999999999974 5899999 7777778899999999986 3
Q ss_pred cchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeecc
Q 006573 596 YFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFG 637 (640)
Q Consensus 596 ~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~ 637 (640)
.+|+|.|+..|+.+++++|+++|||+|.+|.+|.||+..|..
T Consensus 105 ~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~ 146 (300)
T PHA02884 105 ITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALM 146 (300)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 458999999999999999999999999999999999987754
No 36
>PHA02791 ankyrin-like protein; Provisional
Probab=99.22 E-value=7.8e-12 Score=123.73 Aligned_cols=100 Identities=19% Similarity=0.198 Sum_probs=70.5
Q ss_pred CcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcc----------cchh
Q 006573 530 PLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLF----------YFKQ 599 (640)
Q Consensus 530 ~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~----------~~~~ 599 (640)
.+|+|.|+..|+.++++.|+..|+++|.+|..|+||| +.++..++.+++++|+++|+ .+|+
T Consensus 62 ~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpL---------h~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL 132 (284)
T PHA02791 62 EFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTAL---------YYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSF 132 (284)
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHH---------HHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHH
Confidence 5677777777777777777777777777777777777 66666667777777777652 2477
Q ss_pred hHhhcCCCHHHHHHHHhccCCCCCCC-cccceeeeeeccccC
Q 006573 600 HIAASKGSENCVLLLLDYEADPNSIG-MLVTKYIIRFFGFVH 640 (640)
Q Consensus 600 h~a~~~g~~~~~~~L~~~ga~~~~~~-~~g~~~~~~~~~~~~ 640 (640)
|+|+..|+.+++++|+++|++. .| ..|+|||+.|....|
T Consensus 133 ~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~ 172 (284)
T PHA02791 133 YHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGH 172 (284)
T ss_pred HHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCC
Confidence 7777777777777777776543 23 247777777766554
No 37
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.18 E-value=6.6e-12 Score=91.60 Aligned_cols=55 Identities=38% Similarity=0.416 Sum_probs=32.7
Q ss_pred HHhcC-CCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCCHHHHHHHHhccCCCCCCCc
Q 006573 548 LLKRG-LDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGSENCVLLLLDYEADPNSIGM 626 (640)
Q Consensus 548 Ll~~g-~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~ 626 (640)
|+++| .++|.+|..|.||| |+||.+|+.+++++|+++|+|++.+|.
T Consensus 1 LL~~~~~~~n~~d~~G~T~L---------------------------------H~A~~~g~~~~v~~Ll~~g~d~~~~d~ 47 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPL---------------------------------HWAARYGHSEVVRLLLQNGADPNAKDK 47 (56)
T ss_dssp -----T--TT---TTS--HH---------------------------------HHHHHHT-HHHHHHHHHCT--TT---T
T ss_pred CCccCcCCCcCcCCCCCcHH---------------------------------HHHHHcCcHHHHHHHHHCcCCCCCCcC
Confidence 46677 89999999999999 999999999999999999999999999
Q ss_pred ccceeeeee
Q 006573 627 LVTKYIIRF 635 (640)
Q Consensus 627 ~g~~~~~~~ 635 (640)
.|+||+.-|
T Consensus 48 ~G~Tpl~~A 56 (56)
T PF13857_consen 48 DGQTPLHYA 56 (56)
T ss_dssp TS--HHHH-
T ss_pred CCCCHHHhC
Confidence 999998643
No 38
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.16 E-value=3.4e-11 Score=128.86 Aligned_cols=101 Identities=23% Similarity=0.208 Sum_probs=63.4
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHh---------------
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLF--------------- 592 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~--------------- 592 (640)
...+|++.|+..|+.++++.|++.|+++|..+..|.|||++|.. .+..+++++|++
T Consensus 34 ~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~---------~~~~~iv~~Ll~~g~~~~~~~~~~~~~ 104 (434)
T PHA02874 34 ETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIK---------IGAHDIIKLLIDNGVDTSILPIPCIEK 104 (434)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH---------cCCHHHHHHHHHCCCCCCcchhccCCH
Confidence 44577777888888888888888888888888888888844333 233333333332
Q ss_pred --------hc---------ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeecc
Q 006573 593 --------NL---------FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFG 637 (640)
Q Consensus 593 --------~~---------~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~ 637 (640)
+| +.+|+|+|+..|+.+++++|+++|+++|.+|..|.+||+.|..
T Consensus 105 ~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~ 166 (434)
T PHA02874 105 DMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIK 166 (434)
T ss_pred HHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHH
Confidence 21 3345666666666666666666666666666666666655543
No 39
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.15 E-value=3e-11 Score=115.12 Aligned_cols=99 Identities=16% Similarity=-0.014 Sum_probs=56.2
Q ss_pred Ccceeeeeec---CCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccc
Q 006573 530 PLSLCFAALR---GDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYF 597 (640)
Q Consensus 530 ~~~l~~a~~~---g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~ 597 (640)
.+|+|.++.. ++.++++.|+++|+++|.+|..|+||||.|.. ...+..+++++|+++| +.+
T Consensus 88 ~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~-------~~~~~~~iv~~Li~~gadin~~d~~g~t 160 (209)
T PHA02859 88 LSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMC-------NFNVRINVIKLLIDSGVSFLNKDFDNNN 160 (209)
T ss_pred CCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH-------hccCCHHHHHHHHHcCCCcccccCCCCc
Confidence 3444544322 24555555555555555555555555522211 0113466777777665 334
Q ss_pred hhhH-hhcCCCHHHHHHHHhccCCCCCCCcccceeeeee
Q 006573 598 KQHI-AASKGSENCVLLLLDYEADPNSIGMLVTKYIIRF 635 (640)
Q Consensus 598 ~~h~-a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~ 635 (640)
|+|. |+..|+.+++++|+++|||+|.+|..|+||+.-|
T Consensus 161 ~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la 199 (209)
T PHA02859 161 ILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLI 199 (209)
T ss_pred HHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 6774 4456677777777777777777777777776544
No 40
>PHA02946 ankyin-like protein; Provisional
Probab=99.14 E-value=4.7e-11 Score=127.03 Aligned_cols=113 Identities=16% Similarity=0.134 Sum_probs=86.8
Q ss_pred cCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcc--------------------------ccc
Q 006573 525 GRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSE--------------------------FFS 578 (640)
Q Consensus 525 g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~--------------------------~~~ 578 (640)
.+..+.+|+|+|+..|+.++++.|+++|+++|.+|..|+||||+|+..+.+ ..+
T Consensus 68 ~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~a 147 (446)
T PHA02946 68 TDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLLA 147 (446)
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHHH
Confidence 345677899999999999999999999999999999999999866532210 112
Q ss_pred ccccchhHHHHHHhhc---------ccchhhHhhcCCC--HHHHHHHHhccCCCCCCCcccceeeeeecc
Q 006573 579 IPISCNNVIKFLLFNL---------FYFKQHIAASKGS--ENCVLLLLDYEADPNSIGMLVTKYIIRFFG 637 (640)
Q Consensus 579 ~~~~~~~~~~~L~~~~---------~~~~~h~a~~~g~--~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~ 637 (640)
+..++.+++++|+++| +.+|+|.|+..++ .+++++|+++|||+|.+|.+|+|||+.|..
T Consensus 148 a~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~ 217 (446)
T PHA02946 148 CTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCS 217 (446)
T ss_pred HHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 2235567778888765 4557888776544 588888888888888888888888887764
No 41
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.14 E-value=4.5e-11 Score=127.29 Aligned_cols=99 Identities=19% Similarity=0.162 Sum_probs=74.2
Q ss_pred CCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccchh
Q 006573 529 LPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFKQ 599 (640)
Q Consensus 529 l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~~ 599 (640)
+.+|+++|+..|+.++++.|+++|+++|.+|..|.||| |.++..+..+++++|+++| +.+||
T Consensus 102 g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpL---------h~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL 172 (413)
T PHA02875 102 GMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPL---------HLAVMMGDIKGIELLIDHKACLDIEDCCGCTPL 172 (413)
T ss_pred CCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHH---------HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 45677778888888888888888888888888888888 6666666677788887765 45578
Q ss_pred hHhhcCCCHHHHHHHHhccCCCCCCCcccc-eeeeeec
Q 006573 600 HIAASKGSENCVLLLLDYEADPNSIGMLVT-KYIIRFF 636 (640)
Q Consensus 600 h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~-~~~~~~~ 636 (640)
|+|+..|+.+++++|+++|||+|..+..|. +|++.|.
T Consensus 173 ~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~ 210 (413)
T PHA02875 173 IIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAI 210 (413)
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHH
Confidence 888888888888888888888888777764 4554343
No 42
>PHA02917 ankyrin-like protein; Provisional
Probab=99.13 E-value=3.2e-11 Score=133.42 Aligned_cols=100 Identities=16% Similarity=0.090 Sum_probs=87.0
Q ss_pred ceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccc--cccccchhHHHHHHhhcc--------------
Q 006573 532 SLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFF--SIPISCNNVIKFLLFNLF-------------- 595 (640)
Q Consensus 532 ~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~--~~~~~~~~~~~~L~~~~~-------------- 595 (640)
+++.|+..|+.++++.|+.+|+|+|.+|.+|+||| +. ++..++.+++++|+++|+
T Consensus 106 ~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L---------~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~ 176 (661)
T PHA02917 106 FSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVI---------ENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYA 176 (661)
T ss_pred HHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHH---------HHHHHccCCCHHHHHHHHHcCCCccccccccccccc
Confidence 34568888999999999999999999999999999 53 234578999999999974
Q ss_pred ---------cchhhHhhc-----------CCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 596 ---------YFKQHIAAS-----------KGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 596 ---------~~~~h~a~~-----------~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
.+|||+|+. .|+.+++++|+++|||+|.+|.+|.|||+.|....|
T Consensus 177 ~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~ 241 (661)
T PHA02917 177 YDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSH 241 (661)
T ss_pred cccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCC
Confidence 279999986 568999999999999999999999999999887654
No 43
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.13 E-value=4.6e-11 Score=97.22 Aligned_cols=62 Identities=42% Similarity=0.515 Sum_probs=41.9
Q ss_pred cceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCCHHH
Q 006573 531 LSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGSENC 610 (640)
Q Consensus 531 ~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~~~~ 610 (640)
+++++|+..|+.++++.|+++|+++|.+|..|+||| |.|+..|+.++
T Consensus 28 ~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L---------------------------------~~A~~~~~~~~ 74 (89)
T PF12796_consen 28 TALHYAAENGNLEIVKLLLENGADINSQDKNGNTAL---------------------------------HYAAENGNLEI 74 (89)
T ss_dssp BHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHH---------------------------------HHHHHTTHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHH---------------------------------HHHHHcCCHHH
Confidence 445555555555555555555555555555555555 99999999999
Q ss_pred HHHHHhccCCCCCCC
Q 006573 611 VLLLLDYEADPNSIG 625 (640)
Q Consensus 611 ~~~L~~~ga~~~~~~ 625 (640)
+++|+++|+++|.+|
T Consensus 75 ~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 75 VKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHHTTT-TTSS-
T ss_pred HHHHHHcCCCCCCcC
Confidence 999999999999986
No 44
>PHA02741 hypothetical protein; Provisional
Probab=99.12 E-value=3.9e-11 Score=110.45 Aligned_cols=104 Identities=13% Similarity=-0.042 Sum_probs=86.8
Q ss_pred CCCCCcceeeeeecCCHHHHHHHHh------cCCCCCCCCCCCCcccccccccCcccccccccc----hhHHHHHHhhc-
Q 006573 526 RMDLPLSLCFAALRGDDLLLHQLLK------RGLDPNESDNNGRTALVCLTHFNSEFFSIPISC----NNVIKFLLFNL- 594 (640)
Q Consensus 526 ~~~l~~~l~~a~~~g~~~~v~~Ll~------~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~----~~~~~~L~~~~- 594 (640)
+....+++|.|+..|+.++++.++. .|+++|.+|..|+||| |+++..++ .+++++|+++|
T Consensus 18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~L---------h~A~~~g~~~~~~~ii~~Ll~~ga 88 (169)
T PHA02741 18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCI---------HIAAEKHEAQLAAEIIDHLIELGA 88 (169)
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHH---------HHHHHcCChHHHHHHHHHHHHcCC
Confidence 3456788899999999999998753 3688999999999999 55444444 57889998764
Q ss_pred ---------ccchhhHhhcCCCHHHHHHHHh-ccCCCCCCCcccceeeeeeccc
Q 006573 595 ---------FYFKQHIAASKGSENCVLLLLD-YEADPNSIGMLVTKYIIRFFGF 638 (640)
Q Consensus 595 ---------~~~~~h~a~~~g~~~~~~~L~~-~ga~~~~~~~~g~~~~~~~~~~ 638 (640)
+.+|||+|+..|+.+++++|++ .|++++.+|.+|+||+..|...
T Consensus 89 din~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~ 142 (169)
T PHA02741 89 DINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDN 142 (169)
T ss_pred CCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHC
Confidence 5568999999999999999998 5999999999999999876543
No 45
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=99.12 E-value=1.1e-10 Score=112.51 Aligned_cols=118 Identities=21% Similarity=0.356 Sum_probs=107.8
Q ss_pred HhhhHHhhhhccccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCee
Q 006573 371 HYLFYSLMDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEIC 450 (640)
Q Consensus 371 ~~~~~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~f 450 (640)
..++.++|+++|+++.|.......++..+.+..|++|+.|..+|+.++.+|+|.+|.|.+....+| ..+ .++.||+|
T Consensus 235 rkMy~~~l~s~pil~~l~k~er~kv~dal~~k~y~~G~~Vi~qg~~ge~f~~i~eGEvdv~~~~~~--v~v-kl~~~dyf 311 (368)
T KOG1113|consen 235 RKMYEPFLESVPILESLEKLERAKVADALGTKSYKDGERVIVQGDQGEHFYIIEEGEVDVLKKRDG--VEV-KLKKGDYF 311 (368)
T ss_pred hhhhhhhhhcchhhHHHHHHHHHhhhcccceeeccCCceEEeccCCcceEEEecccccchhhccCC--eEE-Eechhhhc
Confidence 357788999999999999999999999999999999999999999999999999999999775444 344 99999999
Q ss_pred echhhhcCCCeeeEEEEccceEEEEeeHHHHHHHHHhchhh
Q 006573 451 GEIGVLCYRPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGD 491 (640)
Q Consensus 451 Ge~~l~~~~~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~ 491 (640)
||.+++.+.||.++|.|.+...+..+++..|++++.-..+.
T Consensus 312 ge~al~~~~pr~Atv~a~~~~kc~~~dk~~ferllgpc~di 352 (368)
T KOG1113|consen 312 GELALLKNLPRAATVVAKGRLKCAKLDKPRFERLLGPCQDI 352 (368)
T ss_pred chHHHHhhchhhceeeccCCceeeeeChHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999999765443
No 46
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.12 E-value=5.8e-11 Score=113.12 Aligned_cols=103 Identities=17% Similarity=0.079 Sum_probs=84.4
Q ss_pred CCCCcceeeeeec--CCHHHHHHHHhcCCCCCCCC-CCCCcccccccccCcccccccccchhHHHHHHhhc---------
Q 006573 527 MDLPLSLCFAALR--GDDLLLHQLLKRGLDPNESD-NNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL--------- 594 (640)
Q Consensus 527 ~~l~~~l~~a~~~--g~~~~v~~Ll~~g~~~n~~d-~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~--------- 594 (640)
....+|++.|+.. ++.++++.|+++|+++|.+| ..|.||||+|...+ ..+..+++++|+++|
T Consensus 49 ~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~------~~~~~eiv~~Ll~~gadin~~d~~ 122 (209)
T PHA02859 49 DLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFN------KNVEPEILKILIDSGSSITEEDED 122 (209)
T ss_pred ccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhC------ccccHHHHHHHHHCCCCCCCcCCC
Confidence 3456788888764 48999999999999999997 48999995432211 113579999999885
Q ss_pred ccchhhHhhc--CCCHHHHHHHHhccCCCCCCCcccceeeeee
Q 006573 595 FYFKQHIAAS--KGSENCVLLLLDYEADPNSIGMLVTKYIIRF 635 (640)
Q Consensus 595 ~~~~~h~a~~--~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~ 635 (640)
+.+|+|.|+. .++.+++++|+++|||+|.+|.+|.||++.+
T Consensus 123 G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~ 165 (209)
T PHA02859 123 GKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSY 165 (209)
T ss_pred CCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHH
Confidence 8889999875 5789999999999999999999999999864
No 47
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.11 E-value=8e-11 Score=101.52 Aligned_cols=93 Identities=19% Similarity=0.070 Sum_probs=60.1
Q ss_pred eeecCCHHHHHHHHhcCCC-CCCCCCCCCcccccccccCcccccccccchhHHHHHHhh---------cccchhhHhhcC
Q 006573 536 AALRGDDLLLHQLLKRGLD-PNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFN---------LFYFKQHIAASK 605 (640)
Q Consensus 536 a~~~g~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~---------~~~~~~h~a~~~ 605 (640)
|+..+....|+.||+..++ +|.+|.+|.||| |+|+-.+...+|+.|+.+ .||+|||-||+=
T Consensus 70 aae~nrl~eV~~lL~e~an~vNtrD~D~YTpL---------HRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckW 140 (228)
T KOG0512|consen 70 AAEKNRLTEVQRLLSEKANHVNTRDEDEYTPL---------HRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKW 140 (228)
T ss_pred HHhhccHHHHHHHHHhccccccccccccccHH---------HHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcc
Confidence 4555555555555555443 555555566666 555555555555555533 255556888888
Q ss_pred CCHHHHHHHHhccCCCCCCCcccceeeeeecc
Q 006573 606 GSENCVLLLLDYEADPNSIGMLVTKYIIRFFG 637 (640)
Q Consensus 606 g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~ 637 (640)
++.+++-.|++||||+|++.+--.|||+-+.+
T Consensus 141 nN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~ 172 (228)
T KOG0512|consen 141 NNFEVAGRLLQHGADVNAQTKGLLTPLHLAAG 172 (228)
T ss_pred cchhHHHHHHhccCcccccccccchhhHHhhc
Confidence 88888888888888888888888888765543
No 48
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.11 E-value=4.8e-11 Score=129.35 Aligned_cols=99 Identities=25% Similarity=0.239 Sum_probs=74.2
Q ss_pred CCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccc-cchhHHHHHHhhc----------c
Q 006573 527 MDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPI-SCNNVIKFLLFNL----------F 595 (640)
Q Consensus 527 ~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~-~~~~~~~~L~~~~----------~ 595 (640)
..+.+|+|.|+..|+.++++.|++.|+++|.+|..|+|||| .++.. +..+++++|+++| +
T Consensus 199 ~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh---------~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g 269 (477)
T PHA02878 199 KTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLH---------ISVGYCKDYDILKLLLEHGVDVNAKSYILG 269 (477)
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHH---------HHHHhcCCHHHHHHHHHcCCCCCccCCCCC
Confidence 34557777777778888888888888888888878888883 33322 3577888888765 4
Q ss_pred cchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeec
Q 006573 596 YFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFF 636 (640)
Q Consensus 596 ~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~ 636 (640)
.+|||.| .++.+++++|+++|||+|.+|..|.||+..|.
T Consensus 270 ~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~ 308 (477)
T PHA02878 270 LTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAV 308 (477)
T ss_pred CCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 5688888 45678888888888888888888888887765
No 49
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.11 E-value=4e-11 Score=131.98 Aligned_cols=113 Identities=16% Similarity=0.072 Sum_probs=91.2
Q ss_pred ccCCCCCcceeeeeecCC--HHHHHHHHhcCCCCCCCCCCCCccccccccc----Ccc----------------------
Q 006573 524 RGRMDLPLSLCFAALRGD--DLLLHQLLKRGLDPNESDNNGRTALVCLTHF----NSE---------------------- 575 (640)
Q Consensus 524 ~g~~~l~~~l~~a~~~g~--~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~----~~~---------------------- 575 (640)
..+..+.+|+|.|+..|+ .++++.|+++|+|+|.+|..|.||||+|... +.+
T Consensus 207 ~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~ 286 (764)
T PHA02716 207 LQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILH 286 (764)
T ss_pred CCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhH
Confidence 334467789999999985 5899999999999999999999999876431 000
Q ss_pred --cccccccchhHHHHHHhhc---------ccchhhHhhc--CCCHHHHHHHHhccCCCCCCCcccceeeeeec
Q 006573 576 --FFSIPISCNNVIKFLLFNL---------FYFKQHIAAS--KGSENCVLLLLDYEADPNSIGMLVTKYIIRFF 636 (640)
Q Consensus 576 --~~~~~~~~~~~~~~L~~~~---------~~~~~h~a~~--~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~ 636 (640)
+.++..+..+++++|+++| +.+|||+|+. .++.+++++|+++|||+|.+|..|.|||+.+.
T Consensus 287 ~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~ 360 (764)
T PHA02716 287 SYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYL 360 (764)
T ss_pred HHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHH
Confidence 0134456789999999986 5669999764 56889999999999999999999999998764
No 50
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.10 E-value=8.4e-11 Score=125.21 Aligned_cols=101 Identities=20% Similarity=0.126 Sum_probs=70.4
Q ss_pred CcceeeeeecCCHHHHHHHHhcCCCC-CCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccchh
Q 006573 530 PLSLCFAALRGDDLLLHQLLKRGLDP-NESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFKQ 599 (640)
Q Consensus 530 ~~~l~~a~~~g~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~~ 599 (640)
.+|++.|+..|+.++++.|++.|++. +..+.+|+||| +.|+..+..+++++|+++| +.+|+
T Consensus 69 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL---------~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpL 139 (413)
T PHA02875 69 ESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPL---------HLATILKKLDIMKLLIARGADPDIPNTDKFSPL 139 (413)
T ss_pred ccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHH---------HHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHH
Confidence 34555555555555555555555543 23344556666 5566667788888888876 44588
Q ss_pred hHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeecccc
Q 006573 600 HIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFV 639 (640)
Q Consensus 600 h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~ 639 (640)
|+|+..|+.+++++|+++|+++|.+|..|.|||+.|....
T Consensus 140 h~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g 179 (413)
T PHA02875 140 HLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKG 179 (413)
T ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC
Confidence 8888888888888888888888888888888888776544
No 51
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.08 E-value=7.8e-11 Score=126.12 Aligned_cols=100 Identities=25% Similarity=0.216 Sum_probs=77.7
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccch
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFK 598 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~ 598 (640)
.+.+++|+|+..|+.++++.|+++|+++|.+|..|.||| |+++..+..+++++|+++| +.+|
T Consensus 123 ~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpL---------h~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tp 193 (434)
T PHA02874 123 ELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPI---------HIAIKHNFFDIIKLLLEKGAYANVKDNNGESP 193 (434)
T ss_pred CCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHH---------HHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 455777888888888888888888888888888888888 5566666778888888765 4557
Q ss_pred hhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeec
Q 006573 599 QHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFF 636 (640)
Q Consensus 599 ~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~ 636 (640)
+|+|+..|+.+++++|+++|++++.++..|.|||+.|.
T Consensus 194 L~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~ 231 (434)
T PHA02874 194 LHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAI 231 (434)
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHH
Confidence 88888888888888888888887777777777776654
No 52
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.08 E-value=1.6e-10 Score=105.80 Aligned_cols=98 Identities=15% Similarity=0.026 Sum_probs=84.6
Q ss_pred ccCCCCCcceeeeeecCCHH---HHHHHHhcCCCCCCCC-CCCCcccccccccCcccccccccchhHHHHHHh-hc----
Q 006573 524 RGRMDLPLSLCFAALRGDDL---LLHQLLKRGLDPNESD-NNGRTALVCLTHFNSEFFSIPISCNNVIKFLLF-NL---- 594 (640)
Q Consensus 524 ~g~~~l~~~l~~a~~~g~~~---~v~~Ll~~g~~~n~~d-~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~-~~---- 594 (640)
..+..+.+++|+|+..|..+ .++.|+.+|+++|.+| ..|+||| |+++..+..+++++|++ .+
T Consensus 52 ~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpL---------h~A~~~g~~~iv~~Ll~~~gad~~ 122 (166)
T PHA02743 52 RYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLL---------HIAASTKNYELAEWLCRQLGVNLG 122 (166)
T ss_pred ccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHH---------HHHHHhCCHHHHHHHHhccCCCcc
Confidence 33446678899999988754 4789999999999998 5899999 77777888999999995 54
Q ss_pred -----ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccce
Q 006573 595 -----FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTK 630 (640)
Q Consensus 595 -----~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~ 630 (640)
+.+|+|+|+..|+.+++++|+++||++|.++..|.+
T Consensus 123 ~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~ 163 (166)
T PHA02743 123 AINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS 163 (166)
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence 567999999999999999999999999999998864
No 53
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.08 E-value=1.4e-10 Score=122.56 Aligned_cols=112 Identities=21% Similarity=0.136 Sum_probs=82.4
Q ss_pred hhhhccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHh-hc----
Q 006573 520 NMLARGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLF-NL---- 594 (640)
Q Consensus 520 ~rl~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~-~~---- 594 (640)
+.+...+..+.+|+|+|+.+|..+.++.|+..|+++|.++.++.||| |+|+.-|..+.|+-|++ .+
T Consensus 264 elv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spL---------H~AA~yg~~ntv~rLL~~~~~rll 334 (929)
T KOG0510|consen 264 ELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPL---------HFAAIYGRINTVERLLQESDTRLL 334 (929)
T ss_pred HHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCch---------HHHHHcccHHHHHHHHhCcCcccc
Confidence 34555667788999999999999999999999999999999999999 66666666666666665 21
Q ss_pred ------ccchhhHhhcCCCHHHHHHHHhccCCCC---CCCcccceeeeeeccccC
Q 006573 595 ------FYFKQHIAASKGSENCVLLLLDYEADPN---SIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 595 ------~~~~~h~a~~~g~~~~~~~L~~~ga~~~---~~~~~g~~~~~~~~~~~~ 640 (640)
+.+|||.|+++||..++++|++.||+.+ ..|.+|.|+|+=|..++|
T Consensus 335 ne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~ 389 (929)
T KOG0510|consen 335 NESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGN 389 (929)
T ss_pred ccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhcc
Confidence 4556777777777777777777776665 346677776666655543
No 54
>PHA02795 ankyrin-like protein; Provisional
Probab=99.05 E-value=9.5e-11 Score=120.66 Aligned_cols=100 Identities=12% Similarity=-0.049 Sum_probs=73.6
Q ss_pred cceeeeeecCCHHHHHHHHhcCCCCCCCC------CCCCcccccccccCcccccccccchhHHHHHHhhc---------c
Q 006573 531 LSLCFAALRGDDLLLHQLLKRGLDPNESD------NNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------F 595 (640)
Q Consensus 531 ~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d------~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~ 595 (640)
++++.|+..|+.++++.|+.+|++.+... ..|.||+ +.+...++.+++++|+++| +
T Consensus 151 t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l---------~~a~~~~~~eIve~LIs~GADIN~kD~~G 221 (437)
T PHA02795 151 NAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRG---------FLVDEPTVLEIYKLCIPYIEDINQLDAGG 221 (437)
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchh---------HHHHhcCHHHHHHHHHhCcCCcCcCCCCC
Confidence 45555666666666666666665322111 1233333 4455556789999999987 5
Q ss_pred cchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeecccc
Q 006573 596 YFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFV 639 (640)
Q Consensus 596 ~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~ 639 (640)
.+|||+|+..|+.+++++|+++|||+|.+|..|.|||+.|....
T Consensus 222 ~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g 265 (437)
T PHA02795 222 RTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRG 265 (437)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 66899999999999999999999999999999999999887643
No 55
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.05 E-value=8.5e-11 Score=116.69 Aligned_cols=107 Identities=21% Similarity=0.166 Sum_probs=77.6
Q ss_pred ccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------
Q 006573 524 RGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL--------- 594 (640)
Q Consensus 524 ~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~--------- 594 (640)
+.....++|+..||..|+.+++|.|+++|+|++..|..|+|-| ++++-.|+.++++.|++.|
T Consensus 112 ~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcL---------mIa~ykGh~~I~qyLle~gADvn~ks~k 182 (615)
T KOG0508|consen 112 DTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCL---------MIACYKGHVDIAQYLLEQGADVNAKSYK 182 (615)
T ss_pred cccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeE---------EeeeccCchHHHHHHHHhCCCcchhccc
Confidence 3333455667777888888888888888888888888888888 7777777788888888776
Q ss_pred ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 595 FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 595 ~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
|.++||-++..|+.|++++|+++||.++ +|..|.|||+-|.-.+|
T Consensus 183 GNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~ 227 (615)
T KOG0508|consen 183 GNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLLAAVTGH 227 (615)
T ss_pred CchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHHHhhhcc
Confidence 3446888888888888888888887765 45558888776654433
No 56
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.04 E-value=2e-10 Score=124.58 Aligned_cols=100 Identities=21% Similarity=0.168 Sum_probs=91.6
Q ss_pred CCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccchh
Q 006573 529 LPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFKQ 599 (640)
Q Consensus 529 l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~~ 599 (640)
+.+|+|+|+..|+.++++.|+++|+++|.+|..|.||| |.|+..++.+++++|+++| +.+||
T Consensus 168 g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpL---------h~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpL 238 (477)
T PHA02878 168 GNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPL---------HHAVKHYNKPIVHILLENGASTDARDKCGNTPL 238 (477)
T ss_pred CCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHH---------HHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 67889999999999999999999999999999999999 7777778899999999885 88899
Q ss_pred hHhhcC-CCHHHHHHHHhccCCCCCCCc-ccceeeeeecc
Q 006573 600 HIAASK-GSENCVLLLLDYEADPNSIGM-LVTKYIIRFFG 637 (640)
Q Consensus 600 h~a~~~-g~~~~~~~L~~~ga~~~~~~~-~g~~~~~~~~~ 637 (640)
|+|+.. ++.+++++|+++|||+|.++. .|.|||+.|.+
T Consensus 239 h~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A~~ 278 (477)
T PHA02878 239 HISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSIK 278 (477)
T ss_pred HHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHHcc
Confidence 999976 789999999999999999986 89999998843
No 57
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.04 E-value=1e-10 Score=107.11 Aligned_cols=100 Identities=14% Similarity=-0.013 Sum_probs=81.7
Q ss_pred CcceeeeeecCCH----HHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccch---hHHHHHHhhc--------
Q 006573 530 PLSLCFAALRGDD----LLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCN---NVIKFLLFNL-------- 594 (640)
Q Consensus 530 ~~~l~~a~~~g~~----~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~---~~~~~L~~~~-------- 594 (640)
...++.|+..|+. ++++.+...|+++|.+|.+|+||| |+++..+.. +++++|+++|
T Consensus 21 ~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~L---------h~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~ 91 (166)
T PHA02743 21 QNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCT---------HMVAWYDRANAVMKIELLVNMGADINAREL 91 (166)
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHH---------HHHHHhCccCHHHHHHHHHHcCCCCCCCCC
Confidence 3456778888988 555667788999999999999999 555554443 4478999775
Q ss_pred --ccchhhHhhcCCCHHHHHHHHh-ccCCCCCCCcccceeeeeeccc
Q 006573 595 --FYFKQHIAASKGSENCVLLLLD-YEADPNSIGMLVTKYIIRFFGF 638 (640)
Q Consensus 595 --~~~~~h~a~~~g~~~~~~~L~~-~ga~~~~~~~~g~~~~~~~~~~ 638 (640)
+.+|||+|+..|+.+++++|++ +|++++.+|..|.+|++-|...
T Consensus 92 ~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~ 138 (166)
T PHA02743 92 GTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKM 138 (166)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHc
Confidence 4569999999999999999995 8999999999999999877654
No 58
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.03 E-value=1.6e-10 Score=107.52 Aligned_cols=120 Identities=20% Similarity=0.099 Sum_probs=106.0
Q ss_pred cchhhhhhhhhhHhhhhccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhH
Q 006573 507 KDPIMEGVLLETENMLARGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNV 586 (640)
Q Consensus 507 ~~~~~~~~~~~~~~rl~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~ 586 (640)
........+.+.+.-+..|+-..-.|+|+++.+|+..+++.|+.+|+-+|..+....||| |.++..|+-++
T Consensus 12 na~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtpl---------hlaaahghrdi 82 (448)
T KOG0195|consen 12 NAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPL---------HLAAAHGHRDI 82 (448)
T ss_pred CeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcch---------hhhhhcccHHH
Confidence 333445556777778888888888899999999999999999999999999998889999 99999999999
Q ss_pred HHHHHhhc---------ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeee
Q 006573 587 IKFLLFNL---------FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRF 635 (640)
Q Consensus 587 ~~~L~~~~---------~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~ 635 (640)
|..|++.. +.+|||+||.-|...+++-|+..||.++.-+++|.+||=++
T Consensus 83 vqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka 140 (448)
T KOG0195|consen 83 VQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA 140 (448)
T ss_pred HHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence 98888763 66799999999999999999999999999999999998654
No 59
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.02 E-value=1.7e-10 Score=125.50 Aligned_cols=102 Identities=23% Similarity=0.160 Sum_probs=77.8
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCC------CcccccccccCcccccccccc--hhHHHHHHhhc-----
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNG------RTALVCLTHFNSEFFSIPISC--NNVIKFLLFNL----- 594 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g------~t~L~~~~~~~~~~~~~~~~~--~~~~~~L~~~~----- 594 (640)
.+.+|++.|+..|+.++++.|+++|++++..+..| .||| +.++..+. .+++++|+++|
T Consensus 175 ~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l---------~~a~~~~~~~~~iv~~Ll~~g~din~ 245 (480)
T PHA03100 175 YGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPL---------HIAACYNEITLEVVNYLLSYGVPINI 245 (480)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHH---------HHHHHhCcCcHHHHHHHHHcCCCCCC
Confidence 44566666666666677776666666666666666 5566 55555566 88889999885
Q ss_pred ----ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccc
Q 006573 595 ----FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGF 638 (640)
Q Consensus 595 ----~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~ 638 (640)
+.+|||+|+..|+.+++++|+++|||+|.+|..|.||+..|...
T Consensus 246 ~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~ 293 (480)
T PHA03100 246 KDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILN 293 (480)
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHh
Confidence 55689999999999999999999999999999999998877643
No 60
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.02 E-value=2.3e-10 Score=87.92 Aligned_cols=72 Identities=31% Similarity=0.296 Sum_probs=68.3
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCC
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGS 607 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~ 607 (640)
..+.|+|+|+-.|+.+++++++..|++++.+|+.|-||| -.|+..||
T Consensus 33 ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPL---------------------------------LsAvwEGH 79 (117)
T KOG4214|consen 33 GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPL---------------------------------LSAVWEGH 79 (117)
T ss_pred CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHH---------------------------------HHHHHHhh
Confidence 567899999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHhccCCCCCCCcccceee
Q 006573 608 ENCVLLLLDYEADPNSIGMLVTKYI 632 (640)
Q Consensus 608 ~~~~~~L~~~ga~~~~~~~~g~~~~ 632 (640)
.+||++|+.+|||-..+.++|.+++
T Consensus 80 ~~cVklLL~~GAdrt~~~PdG~~~~ 104 (117)
T KOG4214|consen 80 RDCVKLLLQNGADRTIHAPDGTALI 104 (117)
T ss_pred HHHHHHHHHcCcccceeCCCchhHH
Confidence 9999999999999999999998765
No 61
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.02 E-value=2.6e-10 Score=113.26 Aligned_cols=101 Identities=21% Similarity=0.136 Sum_probs=60.7
Q ss_pred CCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccc
Q 006573 527 MDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYF 597 (640)
Q Consensus 527 ~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~ 597 (640)
..+.+|++.|+..|+.++|+.|+.+|+++|.......||| --|..=|..++||.|++++ |.+
T Consensus 82 IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPL---------raACfDG~leivKyLvE~gad~~IanrhGhT 152 (615)
T KOG0508|consen 82 IEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPL---------RAACFDGHLEIVKYLVEHGADPEIANRHGHT 152 (615)
T ss_pred cCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccH---------HHHHhcchhHHHHHHHHcCCCCcccccCCCe
Confidence 3445555666666666666666666666666666666666 3333335566666666653 455
Q ss_pred hhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeec
Q 006573 598 KQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFF 636 (640)
Q Consensus 598 ~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~ 636 (640)
-||+||.+||.+++++|++.|||+|.++-.|+|.|+-+.
T Consensus 153 cLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~ca 191 (615)
T KOG0508|consen 153 CLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCA 191 (615)
T ss_pred eEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhh
Confidence 566666666666666666666666666666666665444
No 62
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.01 E-value=1.8e-10 Score=110.86 Aligned_cols=80 Identities=28% Similarity=0.255 Sum_probs=74.0
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCC
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGS 607 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~ 607 (640)
.+.+.++.|+..|..++++.||.-|+|+|.+|.+|.|+| ++||..||
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTAL---------------------------------MCA~EHGh 385 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTAL---------------------------------MCAAEHGH 385 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHH---------------------------------hhhhhhCh
Confidence 445667779999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHhc-cCCCCCCCcccceeeeeeccccC
Q 006573 608 ENCVLLLLDY-EADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 608 ~~~~~~L~~~-ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
+|++++|+.+ ++|+...|.+|.|.|.-|+..+|
T Consensus 386 kEivklLLA~p~cd~sLtD~DgSTAl~IAleagh 419 (452)
T KOG0514|consen 386 KEIVKLLLAVPSCDISLTDVDGSTALSIALEAGH 419 (452)
T ss_pred HHHHHHHhccCcccceeecCCCchhhhhHHhcCc
Confidence 9999999986 89999999999999999988877
No 63
>PHA02795 ankyrin-like protein; Provisional
Probab=99.01 E-value=1.5e-10 Score=119.20 Aligned_cols=102 Identities=14% Similarity=0.053 Sum_probs=88.2
Q ss_pred CCCcceeeeee--cCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcc----------
Q 006573 528 DLPLSLCFAAL--RGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLF---------- 595 (640)
Q Consensus 528 ~l~~~l~~a~~--~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~---------- 595 (640)
...+.+|+++. .|+.++++.|+.+|+|+|..+ +.||| +.++..++.+++++|+++|+
T Consensus 115 ~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~~--~~t~l---------h~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l 183 (437)
T PHA02795 115 SVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKIE--CLNAY---------FRGICKKESSVVEFILNCGIPDENDVKLDL 183 (437)
T ss_pred cccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCCC--CCCHH---------HHHHHcCcHHHHHHHHhcCCcccccccchh
Confidence 34567788887 899999999999999999854 58999 77777778999999999973
Q ss_pred -----cchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 596 -----YFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 596 -----~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
++++|.|+..|+.|++++|+++|||+|.+|..|+|||+.|....|
T Consensus 184 ~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~ 233 (437)
T PHA02795 184 YKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGY 233 (437)
T ss_pred hhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCC
Confidence 235788999999999999999999999999999999999876554
No 64
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.01 E-value=1.9e-10 Score=129.33 Aligned_cols=103 Identities=22% Similarity=0.157 Sum_probs=86.7
Q ss_pred CCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccchh
Q 006573 529 LPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFKQ 599 (640)
Q Consensus 529 l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~~ 599 (640)
+-.+++.+...+...+++.++++|++++.++..|.||| |.|+--+...+|++|+++| +++||
T Consensus 507 ~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpL---------h~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPL 577 (1143)
T KOG4177|consen 507 GLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPL---------HVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPL 577 (1143)
T ss_pred ccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchH---------HHHHhcCCchHHHHhhhCCccccccCCCCCChh
Confidence 33556678888888888888888888888888888888 5555556788888888885 66688
Q ss_pred hHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 600 HIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 600 h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
|.||..|+.+++++|+++||++|+.|.+|.|||+.|...+|
T Consensus 578 H~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~ 618 (1143)
T KOG4177|consen 578 HQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGY 618 (1143)
T ss_pred hHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcc
Confidence 99999999999999999999999999999999998765443
No 65
>PHA02730 ankyrin-like protein; Provisional
Probab=98.98 E-value=9.2e-10 Score=119.01 Aligned_cols=110 Identities=17% Similarity=0.116 Sum_probs=85.9
Q ss_pred CCCCcceeeeeecCC----HHHHHHHHhcCC--CCCCCCCCCCccccc--ccccCcccc-cccccchhHHHHHHhhc---
Q 006573 527 MDLPLSLCFAALRGD----DLLLHQLLKRGL--DPNESDNNGRTALVC--LTHFNSEFF-SIPISCNNVIKFLLFNL--- 594 (640)
Q Consensus 527 ~~l~~~l~~a~~~g~----~~~v~~Ll~~g~--~~n~~d~~g~t~L~~--~~~~~~~~~-~~~~~~~~~~~~L~~~~--- 594 (640)
..+.+|+|.|+..+. .++++.|+.+|+ ++|.+|..|+||||. ++..+.... .......+++++|+++|
T Consensus 376 ~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADI 455 (672)
T PHA02730 376 TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDI 455 (672)
T ss_pred CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccch
Confidence 356789998888774 899999999997 699999999999953 121111111 11112346799999997
Q ss_pred ------ccchhhHhhcCCCHHHHHHHHhccCCCCCCCc-ccceeeeeec
Q 006573 595 ------FYFKQHIAASKGSENCVLLLLDYEADPNSIGM-LVTKYIIRFF 636 (640)
Q Consensus 595 ------~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~-~g~~~~~~~~ 636 (640)
+.+|||+|+..|+.+++++|+++|||+|.+|. .|++|+..|.
T Consensus 456 NakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa 504 (672)
T PHA02730 456 DMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSS 504 (672)
T ss_pred hccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHH
Confidence 56699999999999999999999999999997 5999998663
No 66
>PRK10537 voltage-gated potassium channel; Provisional
Probab=98.98 E-value=8.4e-09 Score=106.55 Aligned_cols=56 Identities=32% Similarity=0.538 Sum_probs=51.5
Q ss_pred HHHHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006573 248 WIRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLV 303 (640)
Q Consensus 248 ~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~ 303 (640)
..++.+|+||+++|+||+||||+.|.|..+++++++++++|+.++++.++.+..-+
T Consensus 166 ~~s~~dA~y~svvt~tTvGyGdi~p~t~~grl~~i~~ii~Gi~vf~~~is~i~~p~ 221 (393)
T PRK10537 166 IESLSTAFYFSIVTMSTVGYGDIVPVSESARLFTISVIILGITVFATSISAIFGPV 221 (393)
T ss_pred CCCHHHHHHhhheeeecccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999998877644
No 67
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.98 E-value=4.9e-10 Score=121.98 Aligned_cols=91 Identities=24% Similarity=0.276 Sum_probs=50.2
Q ss_pred CCcceeeee--ecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCccccccccc--chhHHHHHHhhc---------c
Q 006573 529 LPLSLCFAA--LRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPIS--CNNVIKFLLFNL---------F 595 (640)
Q Consensus 529 l~~~l~~a~--~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~--~~~~~~~L~~~~---------~ 595 (640)
+.+|+++|+ ..|+.++++.|+++|++++..|..|.||| |.++..+ ..+++++|+++| +
T Consensus 106 g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L---------~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g 176 (480)
T PHA03100 106 GITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLL---------HLYLESNKIDLKILKLLIDKGVDINAKNRYG 176 (480)
T ss_pred CCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHH---------HHHHHcCCChHHHHHHHHHCCCCcccccCCC
Confidence 345555555 55555555555555555555555555555 3333333 455555555553 3
Q ss_pred cchhhHhhcCCCHHHHHHHHhccCCCCCCCccc
Q 006573 596 YFKQHIAASKGSENCVLLLLDYEADPNSIGMLV 628 (640)
Q Consensus 596 ~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g 628 (640)
.+|||+|+..|+.+++++|+++||+++..+..|
T Consensus 177 ~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~ 209 (480)
T PHA03100 177 YTPLHIAVEKGNIDVIKFLLDNGADINAGDIET 209 (480)
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCC
Confidence 345666666666666666666666666555555
No 68
>PHA03095 ankyrin-like protein; Provisional
Probab=98.96 E-value=4.3e-10 Score=122.12 Aligned_cols=105 Identities=18% Similarity=0.118 Sum_probs=85.6
Q ss_pred CCCCcceeeeee--cCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccc--hhHHHHHHhhc--------
Q 006573 527 MDLPLSLCFAAL--RGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISC--NNVIKFLLFNL-------- 594 (640)
Q Consensus 527 ~~l~~~l~~a~~--~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~--~~~~~~L~~~~-------- 594 (640)
..+.++++.++. .+..++++.|++.|+++|.+|..|+||||+|+. .++ ..+++.|+.+|
T Consensus 185 ~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~---------~~~~~~~~v~~ll~~g~din~~d~ 255 (471)
T PHA03095 185 DRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMAT---------GSSCKRSLVLPLLIAGISINARNR 255 (471)
T ss_pred CCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHh---------cCCchHHHHHHHHHcCCCCCCcCC
Confidence 345566666664 477899999999999999999999999954444 333 24677777764
Q ss_pred -ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 595 -FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 595 -~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
+.+|||+|+..|+.+++++|+++|||+|.+|.+|+||+..|....|
T Consensus 256 ~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~ 302 (471)
T PHA03095 256 YGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNN 302 (471)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCC
Confidence 6779999999999999999999999999999999999988765443
No 69
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.96 E-value=4.1e-10 Score=122.50 Aligned_cols=108 Identities=13% Similarity=0.048 Sum_probs=77.3
Q ss_pred CCcceeeee----ecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhh--------ccc
Q 006573 529 LPLSLCFAA----LRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFN--------LFY 596 (640)
Q Consensus 529 l~~~l~~a~----~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~--------~~~ 596 (640)
+.+|++.++ ..++.++++.|+++|+++|.+|..|.|||+.+...+. +....+.+++++|... .|.
T Consensus 181 g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~---~~~~~~~~il~~l~~~advn~~d~~G~ 257 (494)
T PHA02989 181 GLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNK---ILSKKEFKVLNFILKYIKINKKDKKGF 257 (494)
T ss_pred CCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhch---hhcccchHHHHHHHhCCCCCCCCCCCC
Confidence 345555443 3346777777777777777777777777743332211 1222445666766654 277
Q ss_pred chhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeecccc
Q 006573 597 FKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFV 639 (640)
Q Consensus 597 ~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~ 639 (640)
+|||+|+..|+.+++++|+++|||+|.+|..|+|||+.|....
T Consensus 258 TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~ 300 (494)
T PHA02989 258 NPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHG 300 (494)
T ss_pred CHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 8999999999999999999999999999999999999886544
No 70
>PHA02917 ankyrin-like protein; Provisional
Probab=98.96 E-value=4.4e-10 Score=124.51 Aligned_cols=106 Identities=13% Similarity=0.003 Sum_probs=77.0
Q ss_pred CCCCCcceeeee---ecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhccc------
Q 006573 526 RMDLPLSLCFAA---LRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFY------ 596 (640)
Q Consensus 526 ~~~l~~~l~~a~---~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~------ 596 (640)
+..+.+++|+|+ ..|+.++++.|++.|++++.+|..|+||||.|+..+.. -...++++.|+++++.
T Consensus 29 d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~-----~v~~~~~~~Ll~~~~~~n~~~~ 103 (661)
T PHA02917 29 NQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHV-----KVNKDIAMALLEATGYSNINDF 103 (661)
T ss_pred CCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCh-----hHHHHHHHHHHhccCCCCCCCc
Confidence 445678889864 44889999999999999999999999999544443210 0113455677765432
Q ss_pred -chhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeec
Q 006573 597 -FKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFF 636 (640)
Q Consensus 597 -~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~ 636 (640)
.++|.|+.+|+.|+|++|+++|||+|.+|.+|+|||+.+.
T Consensus 104 ~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~ 144 (661)
T PHA02917 104 NIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYV 144 (661)
T ss_pred chHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHH
Confidence 3567777888888888888888888888888888887543
No 71
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.94 E-value=1e-09 Score=105.76 Aligned_cols=109 Identities=18% Similarity=0.103 Sum_probs=91.3
Q ss_pred cCCCCCcceeeeeecCCHHHHHHHHhcCC-CCCCCCCCCCcccccccc---cCcccccccccchhHHHHHHhhc------
Q 006573 525 GRMDLPLSLCFAALRGDDLLLHQLLKRGL-DPNESDNNGRTALVCLTH---FNSEFFSIPISCNNVIKFLLFNL------ 594 (640)
Q Consensus 525 g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~-~~n~~d~~g~t~L~~~~~---~~~~~~~~~~~~~~~~~~L~~~~------ 594 (640)
.+.++.+.+||++..++.++|+.||+.|. |+|.++.-|.||.|.+++ +.+ ...++|+-|...|
T Consensus 264 aDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~-------~d~~vV~~LF~mgnVNaKA 336 (452)
T KOG0514|consen 264 ADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQP-------ADRTVVERLFKMGDVNAKA 336 (452)
T ss_pred hcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcch-------hhHHHHHHHHhccCcchhh
Confidence 45567788999999999999999999986 899999999999974444 222 2345566666654
Q ss_pred ---ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 595 ---FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 595 ---~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
+.++|++|++.|+.++|+.|+..|||+|.||.+|.|.|+=|..-+|
T Consensus 337 sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGh 385 (452)
T KOG0514|consen 337 SQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGH 385 (452)
T ss_pred hhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhCh
Confidence 6778999999999999999999999999999999999998776655
No 72
>PHA03095 ankyrin-like protein; Provisional
Probab=98.94 E-value=5.9e-10 Score=121.04 Aligned_cols=99 Identities=20% Similarity=0.126 Sum_probs=71.2
Q ss_pred CCCcceeeeeecC---CHHHHHHHHhcCCCCCCCCCCCCcccccccccCccccccccc-chhHHHHHHhhc---------
Q 006573 528 DLPLSLCFAALRG---DDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPIS-CNNVIKFLLFNL--------- 594 (640)
Q Consensus 528 ~l~~~l~~a~~~g---~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~-~~~~~~~L~~~~--------- 594 (640)
.+.+++|.++..+ ..++++.|+++|+|+|.+|..|+||| |.++..+ ..+++++|+++|
T Consensus 46 ~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpL---------h~A~~~~~~~~iv~lLl~~ga~in~~~~~ 116 (471)
T PHA03095 46 YGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPL---------HLYLYNATTLDVIKLLIKAGADVNAKDKV 116 (471)
T ss_pred CCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHH---------HHHHHcCCcHHHHHHHHHcCCCCCCCCCC
Confidence 3456677777766 77788888888888888887888888 4444444 477777777775
Q ss_pred ccchhhHhh--cCCCHHHHHHHHhccCCCCCCCcccceeeeee
Q 006573 595 FYFKQHIAA--SKGSENCVLLLLDYEADPNSIGMLVTKYIIRF 635 (640)
Q Consensus 595 ~~~~~h~a~--~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~ 635 (640)
+.+|||+|+ ..++.+++++|+++|||+|.+|..|.+||+-+
T Consensus 117 g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a 159 (471)
T PHA03095 117 GRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVL 159 (471)
T ss_pred CCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 445777777 45567778888888888887777777777544
No 73
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.94 E-value=7.5e-10 Score=122.06 Aligned_cols=100 Identities=16% Similarity=-0.009 Sum_probs=81.2
Q ss_pred CCCcceeeee--ecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCccccccccc--chhHHHHHHhhc---------
Q 006573 528 DLPLSLCFAA--LRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPIS--CNNVIKFLLFNL--------- 594 (640)
Q Consensus 528 ~l~~~l~~a~--~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~--~~~~~~~L~~~~--------- 594 (640)
.+.+|+|.|+ ..++.++++.|+++|+++|.+|..|.||| |.|+..+ +.++|++|+++|
T Consensus 176 ~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPL---------H~Aa~~g~~~~eIVklLLe~GADVN~kD~~ 246 (764)
T PHA02716 176 TGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPL---------HTYLITGNVCASVIKKIIELGGDMDMKCVN 246 (764)
T ss_pred CCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHH---------HHHHHcCCCCHHHHHHHHHcCCCCCCCCCC
Confidence 3456677654 34678999999999999999999999999 4444444 357889999886
Q ss_pred ccchhhHh-------------------------------------hcCCCHHHHHHHHhccCCCCCCCcccceeeeeec
Q 006573 595 FYFKQHIA-------------------------------------ASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFF 636 (640)
Q Consensus 595 ~~~~~h~a-------------------------------------~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~ 636 (640)
+.+|||.| +..|+.+++++|+++||++|.+|.+|+|||+.|.
T Consensus 247 G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aa 325 (764)
T PHA02716 247 GMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYI 325 (764)
T ss_pred CCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHH
Confidence 44578754 5568899999999999999999999999999865
No 74
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.93 E-value=5.3e-10 Score=100.25 Aligned_cols=103 Identities=19% Similarity=0.110 Sum_probs=91.6
Q ss_pred hhhccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc------
Q 006573 521 MLARGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL------ 594 (640)
Q Consensus 521 rl~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~------ 594 (640)
.+..-+..+.+|+.+|+..|+..++++|+..|+||+.-.+...++| ..+..-+...+|++|++.+
T Consensus 152 ~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resAL---------sLAt~ggytdiV~lLL~r~vdVNvy 222 (296)
T KOG0502|consen 152 KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESAL---------SLATRGGYTDIVELLLTREVDVNVY 222 (296)
T ss_pred cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhH---------hHHhcCChHHHHHHHHhcCCCccee
Confidence 3444555678999999999999999999999999999999899999 6667777899999999985
Q ss_pred ---ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceee
Q 006573 595 ---FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYI 632 (640)
Q Consensus 595 ---~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~ 632 (640)
+-+||-+|+..|+.+||+-|++.|||++..|..|..++
T Consensus 223 DwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~m 263 (296)
T KOG0502|consen 223 DWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIM 263 (296)
T ss_pred ccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHH
Confidence 66699999999999999999999999999999998764
No 75
>PHA02798 ankyrin-like protein; Provisional
Probab=98.92 E-value=9.2e-10 Score=119.60 Aligned_cols=88 Identities=19% Similarity=0.234 Sum_probs=45.2
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccchhhHhhcCCC---HH
Q 006573 542 DLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFKQHIAASKGS---EN 609 (640)
Q Consensus 542 ~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~~h~a~~~g~---~~ 609 (640)
.++++.|+++|+|+|.+|.+|+||||+|+... ..++.+++++|+++| +.+|+|+|+..|+ .+
T Consensus 89 ~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~------~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~ 162 (489)
T PHA02798 89 LDIVKILIENGADINKKNSDGETPLYCLLSNG------YINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIE 162 (489)
T ss_pred HHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcC------CcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHH
Confidence 45555555555555555555555553333211 013455555555554 3335555555554 55
Q ss_pred HHHHHHhccCCCCCCC-cccceeeeee
Q 006573 610 CVLLLLDYEADPNSIG-MLVTKYIIRF 635 (640)
Q Consensus 610 ~~~~L~~~ga~~~~~~-~~g~~~~~~~ 635 (640)
++++|+++|||+|.+| ..|.+|++.+
T Consensus 163 vv~~Ll~~gadin~~~~~~~~t~Lh~~ 189 (489)
T PHA02798 163 IIKLLLEKGVDINTHNNKEKYDTLHCY 189 (489)
T ss_pred HHHHHHHhCCCcccccCcCCCcHHHHH
Confidence 5555555555555553 3455555443
No 76
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.89 E-value=1.5e-09 Score=115.11 Aligned_cols=116 Identities=21% Similarity=0.106 Sum_probs=89.9
Q ss_pred ccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcc----------------------------
Q 006573 524 RGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSE---------------------------- 575 (640)
Q Consensus 524 ~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~---------------------------- 575 (640)
.++....+|+|.|+..+..+..+.|++.|+||-+.|.+|.+|+|+|+..++.
T Consensus 149 l~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~p 228 (929)
T KOG0510|consen 149 LEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATP 228 (929)
T ss_pred ccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcc
Confidence 3444556778888888888877788888888888888888888766664322
Q ss_pred -cccccccchhHHHHHHhhc------------------------ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccce
Q 006573 576 -FFSIPISCNNVIKFLLFNL------------------------FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTK 630 (640)
Q Consensus 576 -~~~~~~~~~~~~~~L~~~~------------------------~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~ 630 (640)
|.|+-.|..++++.++.+| +-+|||+||++|+.++++.|+.+||++|.+++++.+
T Consensus 229 LhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~s 308 (929)
T KOG0510|consen 229 LHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEES 308 (929)
T ss_pred hhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCC
Confidence 2333345566666666653 456999999999999999999999999999999999
Q ss_pred eeeeecccc
Q 006573 631 YIIRFFGFV 639 (640)
Q Consensus 631 ~~~~~~~~~ 639 (640)
||++|+-++
T Consensus 309 pLH~AA~yg 317 (929)
T KOG0510|consen 309 PLHFAAIYG 317 (929)
T ss_pred chHHHHHcc
Confidence 999997653
No 77
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.87 E-value=2e-09 Score=122.11 Aligned_cols=103 Identities=22% Similarity=0.214 Sum_probs=87.6
Q ss_pred CCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCccccccccc-chhHHHHHHhhc---------c
Q 006573 526 RMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPIS-CNNVIKFLLFNL---------F 595 (640)
Q Consensus 526 ~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~-~~~~~~~L~~~~---------~ 595 (640)
+..+.+|+++|+..|+.++++.|++.|++++..+..|.||| |+++..+ ...++++|+++| +
T Consensus 372 d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~L---------h~A~~~~~~~~~vk~Ll~~gadin~~d~~G 442 (682)
T PHA02876 372 DYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTAL---------HFALCGTNPYMSVKTLIDRGANVNSKNKDL 442 (682)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchH---------HHHHHcCCHHHHHHHHHhCCCCCCcCCCCC
Confidence 44567889999999999999999999999999999999999 4443322 345688998875 6
Q ss_pred cchhhHhhcCC-CHHHHHHHHhccCCCCCCCcccceeeeeecc
Q 006573 596 YFKQHIAASKG-SENCVLLLLDYEADPNSIGMLVTKYIIRFFG 637 (640)
Q Consensus 596 ~~~~h~a~~~g-~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~ 637 (640)
.+|||+|+..| +.+++++|+++|||+|.+|..|.||+..|..
T Consensus 443 ~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~~ 485 (682)
T PHA02876 443 STPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALE 485 (682)
T ss_pred ChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 77999999977 5799999999999999999999999987654
No 78
>PHA02798 ankyrin-like protein; Provisional
Probab=98.86 E-value=2.6e-09 Score=116.03 Aligned_cols=95 Identities=15% Similarity=0.097 Sum_probs=58.3
Q ss_pred cCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccchhhHhhcCC---
Q 006573 539 RGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFKQHIAASKG--- 606 (640)
Q Consensus 539 ~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~~h~a~~~g--- 606 (640)
.++.++++.|+++|+|+|.+|..|.||||++... +....+..+++++|+++| +.+|||+|+..|
T Consensus 48 ~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n----~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~ 123 (489)
T PHA02798 48 SPSTDIVKLFINLGANVNGLDNEYSTPLCTILSN----IKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYIN 123 (489)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHh----HHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcC
Confidence 4466677777777777777777777777322211 000113466677777664 566777776654
Q ss_pred CHHHHHHHHhccCCCCCCCcccceeeeeecc
Q 006573 607 SENCVLLLLDYEADPNSIGMLVTKYIIRFFG 637 (640)
Q Consensus 607 ~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~ 637 (640)
+.+++++|+++|||+|.+|..|.+|++.|..
T Consensus 124 ~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~ 154 (489)
T PHA02798 124 NLEILLFMIENGADTTLLDKDGFTMLQVYLQ 154 (489)
T ss_pred hHHHHHHHHHcCCCccccCCCCCcHHHHHHH
Confidence 5677777777777777777777777665543
No 79
>PHA02946 ankyin-like protein; Provisional
Probab=98.86 E-value=1.6e-09 Score=115.46 Aligned_cols=102 Identities=15% Similarity=0.101 Sum_probs=81.8
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccch
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFK 598 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~ 598 (640)
...+|++ ++..|..++++.|++.|+++|.+|..|+||||+|...+ .+..+++++|+++| +.+|
T Consensus 140 ~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~-------~~~~~~v~~Ll~~Gadin~~d~~G~Tp 211 (446)
T PHA02946 140 EGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSD-------NPKASTISWMMKLGISPSKPDHDGNTP 211 (446)
T ss_pred CCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhc-------CCCHHHHHHHHHcCCCCcccCCCCCCH
Confidence 3455564 66778999999999999999999999999994433321 23357889999875 6679
Q ss_pred hhHhhcCC--CHHHHHHHHhccCCCCCCCcccceeeeeeccc
Q 006573 599 QHIAASKG--SENCVLLLLDYEADPNSIGMLVTKYIIRFFGF 638 (640)
Q Consensus 599 ~h~a~~~g--~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~ 638 (640)
||+|+..| +.+++++|++ |||+|.+|..|.|||+-|...
T Consensus 212 LH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~ 252 (446)
T PHA02946 212 LHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKT 252 (446)
T ss_pred HHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHh
Confidence 99999986 7899999995 999999999999999876543
No 80
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.86 E-value=3.2e-09 Score=96.21 Aligned_cols=88 Identities=15% Similarity=0.105 Sum_probs=62.0
Q ss_pred CCCCCcceeeeeecCCH---HHHHHHHhcCCCCCCCCC-CCCcccccccccCcccccccccchhHHHHHHhh-c------
Q 006573 526 RMDLPLSLCFAALRGDD---LLLHQLLKRGLDPNESDN-NGRTALVCLTHFNSEFFSIPISCNNVIKFLLFN-L------ 594 (640)
Q Consensus 526 ~~~l~~~l~~a~~~g~~---~~v~~Ll~~g~~~n~~d~-~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~-~------ 594 (640)
+..+.+++|.|+..|.. +.++.|+..|+++|.+|. +|+||| |+++..+..+++++|++. +
T Consensus 52 d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~L---------h~A~~~~~~~i~~~Ll~~~g~d~n~~ 122 (154)
T PHA02736 52 NRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPL---------HIAVYTQNYELATWLCNQPGVNMEIL 122 (154)
T ss_pred cCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHH---------HHHHHhCCHHHHHHHHhCCCCCCccc
Confidence 44567889999999986 468889999999999984 899999 444444555666666642 2
Q ss_pred ---ccchhhHhhcCCCHHHHHHHHhccCCCC
Q 006573 595 ---FYFKQHIAASKGSENCVLLLLDYEADPN 622 (640)
Q Consensus 595 ---~~~~~h~a~~~g~~~~~~~L~~~ga~~~ 622 (640)
+.+|+|+|+..|+.+++++|+++||+++
T Consensus 123 ~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 123 NYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred cCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 4446666666666666666666666554
No 81
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.84 E-value=3.4e-09 Score=120.22 Aligned_cols=113 Identities=19% Similarity=0.087 Sum_probs=83.3
Q ss_pred cCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcc--------------------cccccccch
Q 006573 525 GRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSE--------------------FFSIPISCN 584 (640)
Q Consensus 525 g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~--------------------~~~~~~~~~ 584 (640)
.+..+.+|+|+|+..|+.++++.|+++|+++|..+..|.||||+|...+.. +.++..+..
T Consensus 174 ~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~ 253 (682)
T PHA02876 174 KDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDL 253 (682)
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCH
Confidence 344567899999999999999999999999999999999999877653311 112222345
Q ss_pred hHHHHHHhhc---------ccchhhHhhcCCCH-HHHHHHHhccCCCCCCCcccceeeeeecc
Q 006573 585 NVIKFLLFNL---------FYFKQHIAASKGSE-NCVLLLLDYEADPNSIGMLVTKYIIRFFG 637 (640)
Q Consensus 585 ~~~~~L~~~~---------~~~~~h~a~~~g~~-~~~~~L~~~ga~~~~~~~~g~~~~~~~~~ 637 (640)
+.+++|++.| +.+|||+|+..|+. +++++|+++|||+|.+|.+|+|||+.|..
T Consensus 254 ~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~ 316 (682)
T PHA02876 254 ETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAK 316 (682)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 5556666553 45678888877775 57788888888888888888888776654
No 82
>PHA02792 ankyrin-like protein; Provisional
Probab=98.84 E-value=3.1e-09 Score=113.77 Aligned_cols=99 Identities=17% Similarity=-0.016 Sum_probs=81.7
Q ss_pred eeeeeecCCHHHHHHHHhcCCCCCCCCCCC--CcccccccccCcccccccccchhHHHHHHhhc---------ccchhhH
Q 006573 533 LCFAALRGDDLLLHQLLKRGLDPNESDNNG--RTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFKQHI 601 (640)
Q Consensus 533 l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g--~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~~h~ 601 (640)
++.|+..|+.++++.|+++|+|+|.+|.+| .||||+|...+. ....+++++|+++| +.+|||.
T Consensus 343 ~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~------~~v~~IlklLIs~GADIN~kD~~G~TPLh~ 416 (631)
T PHA02792 343 YFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHE------SDVLSILKLCKPYIDDINKIDKHGRSILYY 416 (631)
T ss_pred HHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhcc------HhHHHHHHHHHhcCCccccccccCcchHHH
Confidence 566788999999999999999999999875 589954333221 12235678888886 6679999
Q ss_pred hhcCCCHHHHHHHHhccCCCCCCCcccceeeeeecc
Q 006573 602 AASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFG 637 (640)
Q Consensus 602 a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~ 637 (640)
|+..|+.+++++|+++|||+|.+|..|+||+.-|+.
T Consensus 417 Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 417 CIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 999999999999999999999999999999987653
No 83
>PHA02792 ankyrin-like protein; Provisional
Probab=98.76 E-value=7.7e-09 Score=110.77 Aligned_cols=95 Identities=16% Similarity=0.046 Sum_probs=82.2
Q ss_pred eeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCccccccc-ccchhHHHHHHhhccc------------------
Q 006573 536 AALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIP-ISCNNVIKFLLFNLFY------------------ 596 (640)
Q Consensus 536 a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~-~~~~~~~~~L~~~~~~------------------ 596 (640)
+...|+.++++.|+.+|+|+|.++..|+||+ +.++. .++.+++++|+++|+.
T Consensus 79 ~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l---------~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~ 149 (631)
T PHA02792 79 CSDNIDIELLKLLISKGLEINSIKNGINIVE---------KYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITR 149 (631)
T ss_pred HHhcccHHHHHHHHHcCCCcccccCCCCcce---------eEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhccc
Confidence 5677899999999999999999999999999 44433 4789999999988632
Q ss_pred ---------------------------chhhHhhcCC-------CHHHHHHHHhccCCCCCCCcccceeeeeecccc
Q 006573 597 ---------------------------FKQHIAASKG-------SENCVLLLLDYEADPNSIGMLVTKYIIRFFGFV 639 (640)
Q Consensus 597 ---------------------------~~~h~a~~~g-------~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~ 639 (640)
+|||+|+..+ +.|++++|++|||+++.+|..|.+||.-+++.-
T Consensus 150 ~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~ 226 (631)
T PHA02792 150 AEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKC 226 (631)
T ss_pred ccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcc
Confidence 2799999999 899999999999999999999999998776643
No 84
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.76 E-value=6.7e-09 Score=105.60 Aligned_cols=98 Identities=20% Similarity=0.192 Sum_probs=80.0
Q ss_pred cceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccc-------------
Q 006573 531 LSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYF------------- 597 (640)
Q Consensus 531 ~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~------------- 597 (640)
+.+|-++...+.+++++|+++|+++|..|..|+||| |.++..++.++++.|+.+|++.
T Consensus 75 Talhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPl---------haaascg~~~i~~~li~~gA~~~avNsdg~~P~dl 145 (527)
T KOG0505|consen 75 TALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPL---------HAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDL 145 (527)
T ss_pred hhHHHHHhcccHHHHHHHHHhcCCccccccccCCcc---------hhhcccccHHHHHHHHHhhhhhhhccCCCCCcccc
Confidence 445668888999999999999999999999999999 7777777777777777664222
Q ss_pred -------------------------------------------------------hhhHhhcCCCHHHHHHHHhccCCCC
Q 006573 598 -------------------------------------------------------KQHIAASKGSENCVLLLLDYEADPN 622 (640)
Q Consensus 598 -------------------------------------------------------~~h~a~~~g~~~~~~~L~~~ga~~~ 622 (640)
.||+|+.+|-.++.++|+++|.+++
T Consensus 146 ~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~ 225 (527)
T KOG0505|consen 146 AEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVN 225 (527)
T ss_pred ccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcc
Confidence 4888999999999999999999999
Q ss_pred CCCcccceeeeeecc
Q 006573 623 SIGMLVTKYIIRFFG 637 (640)
Q Consensus 623 ~~~~~g~~~~~~~~~ 637 (640)
.+|.+|.+||+=|.-
T Consensus 226 ~~D~dgWtPlHAAA~ 240 (527)
T KOG0505|consen 226 IKDYDGWTPLHAAAH 240 (527)
T ss_pred cccccCCCcccHHHH
Confidence 999999999876543
No 85
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=98.75 E-value=5.5e-09 Score=90.35 Aligned_cols=60 Identities=18% Similarity=-0.020 Sum_probs=51.2
Q ss_pred ccccccchhHHHHHHhh----------cccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeec
Q 006573 577 FSIPISCNNVIKFLLFN----------LFYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFF 636 (640)
Q Consensus 577 ~~~~~~~~~~~~~L~~~----------~~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~ 636 (640)
+++..+....|+-|++- .+|+|||-|+.+|+.++|+.|+..||+++++...|.|||+-|-
T Consensus 69 waae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAc 138 (228)
T KOG0512|consen 69 WAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSAC 138 (228)
T ss_pred HHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhh
Confidence 56666666777766653 3889999999999999999999999999999999999998664
No 86
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.74 E-value=6e-09 Score=75.51 Aligned_cols=53 Identities=40% Similarity=0.554 Sum_probs=44.2
Q ss_pred CcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCCHH
Q 006573 530 PLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGSEN 609 (640)
Q Consensus 530 ~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~~~ 609 (640)
.+++++|+..|+.++++.|+++|.|+|.+|.+|+||| |+|+..|+.+
T Consensus 2 ~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~l---------------------------------h~A~~~g~~~ 48 (54)
T PF13637_consen 2 RTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPL---------------------------------HYAAKNGNID 48 (54)
T ss_dssp SBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HH---------------------------------HHHHHTT-HH
T ss_pred ChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHH---------------------------------HHHHHccCHH
Confidence 4577889999999999999999999999999999999 9999999999
Q ss_pred HHHHHH
Q 006573 610 CVLLLL 615 (640)
Q Consensus 610 ~~~~L~ 615 (640)
++++|+
T Consensus 49 ~~~~Ll 54 (54)
T PF13637_consen 49 IVKFLL 54 (54)
T ss_dssp HHHHHH
T ss_pred HHHHHC
Confidence 999986
No 87
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=98.73 E-value=3.8e-09 Score=81.35 Aligned_cols=74 Identities=23% Similarity=0.231 Sum_probs=67.2
Q ss_pred eeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCCHHHHH
Q 006573 533 LCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGSENCVL 612 (640)
Q Consensus 533 l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~~~~~~ 612 (640)
+.+++.+|..+-++.....|.|+|..= .||+|| |+||-.|+.++.+
T Consensus 6 ~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~pl---------------------------------hyAAD~GQl~ile 51 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPL---------------------------------HYAADYGQLSILE 51 (117)
T ss_pred HhhhhccCcHHHHHHHHHccccHHHHh-CCcccc---------------------------------hHhhhcchHHHHH
Confidence 456889999999999999998888765 799999 9999999999999
Q ss_pred HHHhccCCCCCCCcccceeeeeeccccC
Q 006573 613 LLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 613 ~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
+|+.-||+++.+|+.|.|||.-|.-++|
T Consensus 52 fli~iGA~i~~kDKygITPLLsAvwEGH 79 (117)
T KOG4214|consen 52 FLISIGANIQDKDKYGITPLLSAVWEGH 79 (117)
T ss_pred HHHHhccccCCccccCCcHHHHHHHHhh
Confidence 9999999999999999999987776665
No 88
>PHA02730 ankyrin-like protein; Provisional
Probab=98.73 E-value=9.3e-09 Score=111.35 Aligned_cols=102 Identities=17% Similarity=0.031 Sum_probs=75.9
Q ss_pred CCCCCcceeeeeecC---CHHHHHHHHhcCCCCCCCCCCCCcccccccccCccccccccc--chhHHHHHHhhc------
Q 006573 526 RMDLPLSLCFAALRG---DDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPIS--CNNVIKFLLFNL------ 594 (640)
Q Consensus 526 ~~~l~~~l~~a~~~g---~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~--~~~~~~~L~~~~------ 594 (640)
+..+.+++|+|+..| +.++++.|+.+|+|+|.+|..|+||| |+++..+ ..++|++|+++|
T Consensus 38 d~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPL---------h~Aa~~~~~~~eIv~~Ll~~~~~~~~~ 108 (672)
T PHA02730 38 DRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPL---------GVYSKRKYVKSQIVHLLISSYSNASNE 108 (672)
T ss_pred CCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChH---------HHHHHcCCCcHHHHHHHHhcCCCCCcc
Confidence 345678899999887 58999999999999999999999999 5444433 577788888774
Q ss_pred -----ccchhhHhhc--CCCHHHHHHHHh-ccCCCCCCCc-----ccceeeeeec
Q 006573 595 -----FYFKQHIAAS--KGSENCVLLLLD-YEADPNSIGM-----LVTKYIIRFF 636 (640)
Q Consensus 595 -----~~~~~h~a~~--~g~~~~~~~L~~-~ga~~~~~~~-----~g~~~~~~~~ 636 (640)
+++|+|.++. .++.|++++|++ +|+|++...+ +|.+|+.-+-
T Consensus 109 ~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~ 163 (672)
T PHA02730 109 LTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTT 163 (672)
T ss_pred cccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhc
Confidence 3446777776 777788888885 5677776533 6666665443
No 89
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.69 E-value=1.1e-08 Score=115.28 Aligned_cols=103 Identities=26% Similarity=0.211 Sum_probs=91.0
Q ss_pred CCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccchh
Q 006573 529 LPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFKQ 599 (640)
Q Consensus 529 l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~~ 599 (640)
+-++++.++..|+.+.++.+++.++..|.....|-+++ +.+...+.++.++.++.+| +++||
T Consensus 474 G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~l---------hla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpL 544 (1143)
T KOG4177|consen 474 GFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPL---------HLAADEDTVKVAKILLEHGANVDLRTGRGYTPL 544 (1143)
T ss_pred cCcchhhhhccCCchHHHHhhhcCCccCccchhccchh---------hhhhhhhhHHHHHHHhhcCCceehhcccccchH
Confidence 45667779999999999999998888888888899999 7777777888888888775 67799
Q ss_pred hHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 600 HIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 600 h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
|.||..|+.++|+.|+++|||++++|+.|+|||+.|.-.+|
T Consensus 545 h~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~ 585 (1143)
T KOG4177|consen 545 HVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGH 585 (1143)
T ss_pred HHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcCh
Confidence 99999999999999999999999999999999999987665
No 90
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.68 E-value=1.6e-08 Score=113.01 Aligned_cols=95 Identities=26% Similarity=0.237 Sum_probs=86.7
Q ss_pred ceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccchhhHh
Q 006573 532 SLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFKQHIA 602 (640)
Q Consensus 532 ~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~~h~a 602 (640)
.++.++..|+.+.++.|++.|+++|.+|.+|+||| |+++..++.+++++|+++| +.+|||+|
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpL---------h~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A 155 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPL---------HIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELA 155 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHH---------HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 46678999999999999999999999999999999 7777888999999999986 45699999
Q ss_pred hcCCCHHHHHHHHhc-------cCCCCCCCcccceeeeee
Q 006573 603 ASKGSENCVLLLLDY-------EADPNSIGMLVTKYIIRF 635 (640)
Q Consensus 603 ~~~g~~~~~~~L~~~-------ga~~~~~~~~g~~~~~~~ 635 (640)
+..|+.+++++|+++ ||+++.++..|.+|+.+.
T Consensus 156 ~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~ 195 (664)
T PTZ00322 156 EENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLED 195 (664)
T ss_pred HHCCcHHHHHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence 999999999999999 999999999999887765
No 91
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.65 E-value=1.5e-08 Score=110.31 Aligned_cols=98 Identities=14% Similarity=0.034 Sum_probs=63.9
Q ss_pred CCCcceeeeee---cCCHHHHHHHHhcCCCC-CCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------
Q 006573 528 DLPLSLCFAAL---RGDDLLLHQLLKRGLDP-NESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL--------- 594 (640)
Q Consensus 528 ~l~~~l~~a~~---~g~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~--------- 594 (640)
.+.+|++.|+. .|+.++++.|+++|+|+ +.+|..|+||||+|.. ...++.+++++|+++|
T Consensus 107 ~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~-------~~~~~~~iv~~Ll~~Gadi~~~~~~ 179 (494)
T PHA02989 107 NGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLE-------SFSVKKDVIKILLSFGVNLFEKTSL 179 (494)
T ss_pred CCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHH-------hccCCHHHHHHHHHcCCCccccccc
Confidence 34556655443 36778888888888888 7888888888833221 1124567788887765
Q ss_pred -ccchhhHhhcC----CCHHHHHHHHhccCCCCCCCcccceee
Q 006573 595 -FYFKQHIAASK----GSENCVLLLLDYEADPNSIGMLVTKYI 632 (640)
Q Consensus 595 -~~~~~h~a~~~----g~~~~~~~L~~~ga~~~~~~~~g~~~~ 632 (640)
+.+|+|.|+.. ++.+++++|+++|||+|.+|..|++++
T Consensus 180 ~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l 222 (494)
T PHA02989 180 YGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVL 222 (494)
T ss_pred cCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHH
Confidence 33477777554 477888888888877766655444444
No 92
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.63 E-value=5e-09 Score=97.71 Aligned_cols=91 Identities=21% Similarity=0.200 Sum_probs=77.8
Q ss_pred eeecCCHHHHHHHHhcC-CCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccchhhHhhcC
Q 006573 536 AALRGDDLLLHQLLKRG-LDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFKQHIAASK 605 (640)
Q Consensus 536 a~~~g~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~~h~a~~~ 605 (640)
.|.+|+.-.++..++.. -|.|..|..|.+|| |+++.-|..++|+.|++.| +.+|||+||..
T Consensus 7 wcregna~qvrlwld~tehdln~gddhgfspl---------hwaakegh~aivemll~rgarvn~tnmgddtplhlaaah 77 (448)
T KOG0195|consen 7 WCREGNAFQVRLWLDDTEHDLNVGDDHGFSPL---------HWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAH 77 (448)
T ss_pred hhhcCCeEEEEEEecCcccccccccccCcchh---------hhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhc
Confidence 34555555555555543 47899999999999 9999999999999999875 66699999999
Q ss_pred CCHHHHHHHHhccCCCCCCCcccceeeeee
Q 006573 606 GSENCVLLLLDYEADPNSIGMLVTKYIIRF 635 (640)
Q Consensus 606 g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~ 635 (640)
||.++|+.|++..||+|+.+..|++||+-|
T Consensus 78 ghrdivqkll~~kadvnavnehgntplhya 107 (448)
T KOG0195|consen 78 GHRDIVQKLLSRKADVNAVNEHGNTPLHYA 107 (448)
T ss_pred ccHHHHHHHHHHhcccchhhccCCCchhhh
Confidence 999999999999999999999999999854
No 93
>PF13606 Ank_3: Ankyrin repeat
Probab=98.62 E-value=3.1e-08 Score=61.35 Aligned_cols=24 Identities=46% Similarity=0.562 Sum_probs=23.3
Q ss_pred hHhhcCCCHHHHHHHHhccCCCCC
Q 006573 600 HIAASKGSENCVLLLLDYEADPNS 623 (640)
Q Consensus 600 h~a~~~g~~~~~~~L~~~ga~~~~ 623 (640)
|+||+.|+.|+++.|+++|||+|+
T Consensus 7 h~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 7 HLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred HHHHHhCCHHHHHHHHHcCCCCCC
Confidence 999999999999999999999985
No 94
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=98.60 E-value=4.2e-08 Score=105.04 Aligned_cols=114 Identities=21% Similarity=0.309 Sum_probs=102.7
Q ss_pred HHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEe-eCCceEEEEEecCCCeeechhhhcCCCeeeEEEEc
Q 006573 390 DLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVL-KNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTK 468 (640)
Q Consensus 390 ~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~-~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~ 468 (640)
.++..+=..++.....+|+.+++|||..|++|+|++|+++-..+ .+|+..++..++.||.+|+.+.+++.||..|+.|+
T Consensus 499 p~lr~~D~AldWv~l~~g~alyrqgD~Sd~iyvVl~GRlRsv~~~~~~k~~i~~EygrGd~iG~~E~lt~~~R~tTv~Av 578 (1158)
T KOG2968|consen 499 PFLRKLDFALDWVRLEPGQALYRQGDSSDSIYVVLNGRLRSVIRQSGGKKEIVGEYGRGDLIGEVEMLTKQPRATTVMAV 578 (1158)
T ss_pred HHHhhhhhhcceEEeccccHHHhcCCccCcEEEEecCeehhhhhccCccchhhhhccCcceeehhHHhhcCCccceEEEE
Confidence 45556666778889999999999999999999999999988764 45566689999999999999999999999999999
Q ss_pred cceEEEEeeHHHHHHHHHhchhhHHHHHHHHHHHH
Q 006573 469 RLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQHL 503 (640)
Q Consensus 469 ~~~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~~l 503 (640)
.++++.+||..-|..+..+||....++.+.+.++.
T Consensus 579 RdSelariPe~l~~~ik~ryP~v~~rl~~ll~~~~ 613 (1158)
T KOG2968|consen 579 RDSELARIPEGLLNFIKLRYPQVVTRLIKLLAEKI 613 (1158)
T ss_pred eehhhhhccHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 99999999999999999999999998888888776
No 95
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.60 E-value=4.5e-08 Score=62.62 Aligned_cols=27 Identities=41% Similarity=0.442 Sum_probs=26.2
Q ss_pred hHhhcCCCHHHHHHHHhccCCCCCCCc
Q 006573 600 HIAASKGSENCVLLLLDYEADPNSIGM 626 (640)
Q Consensus 600 h~a~~~g~~~~~~~L~~~ga~~~~~~~ 626 (640)
|+|+..|+.+++++|+++|||+|.+|+
T Consensus 7 h~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 7 HYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp HHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred HHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 999999999999999999999999985
No 96
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.60 E-value=5.3e-08 Score=87.64 Aligned_cols=98 Identities=20% Similarity=0.090 Sum_probs=80.9
Q ss_pred cceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccc---------hhhH
Q 006573 531 LSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYF---------KQHI 601 (640)
Q Consensus 531 ~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~---------~~h~ 601 (640)
.+..+++...+.+.+..+ ....+|..|..|.||| +|++..|..++|++|+..|+.. +|.+
T Consensus 131 s~~slsVhql~L~~~~~~--~~n~VN~~De~GfTpL---------iWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsL 199 (296)
T KOG0502|consen 131 SPLSLSVHQLHLDVVDLL--VNNKVNACDEFGFTPL---------IWAAAKGHIPVVQFLLNSGADPDALGKYRESALSL 199 (296)
T ss_pred ChhhHHHHHHHHHHHHHH--hhccccCccccCchHh---------HHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhH
Confidence 344455555555554333 3457899999999999 9999999999999999998554 6999
Q ss_pred hhcCCCHHHHHHHHhccCCCCCCCcccceeeeeecccc
Q 006573 602 AASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFV 639 (640)
Q Consensus 602 a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~ 639 (640)
|++.|-.++|++|++++.|+|.-|-+|-|||--|..-.
T Consensus 200 At~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgn 237 (296)
T KOG0502|consen 200 ATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGN 237 (296)
T ss_pred HhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCC
Confidence 99999999999999999999999999999998775433
No 97
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.56 E-value=6.3e-08 Score=83.81 Aligned_cols=100 Identities=30% Similarity=0.261 Sum_probs=88.3
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccch
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFK 598 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~ 598 (640)
.+.++++.|+..++.+.++.++..|.+.+..|..|.||+ +.++..+..++++.|++++ +.+|
T Consensus 6 ~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l---------~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 76 (126)
T cd00204 6 DGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPL---------HLAAKNGHLEIVKLLLEKGADVNARDKDGNTP 76 (126)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHH---------HHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 345778889999999999999999999999999999999 6666666779999999876 4558
Q ss_pred hhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeec
Q 006573 599 QHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFF 636 (640)
Q Consensus 599 ~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~ 636 (640)
+|.|+..++.++++.|+++|.+++..|..|.+|+..+.
T Consensus 77 l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~ 114 (126)
T cd00204 77 LHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAA 114 (126)
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 99999999999999999999999999999999987654
No 98
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.55 E-value=2e-08 Score=72.72 Aligned_cols=41 Identities=27% Similarity=0.079 Sum_probs=33.1
Q ss_pred hHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 600 HIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 600 h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
|+||..|+.++++.|+++|+|+|.+|.+|+||++.|....|
T Consensus 6 h~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~ 46 (54)
T PF13637_consen 6 HWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGN 46 (54)
T ss_dssp HHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-
T ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccC
Confidence 99999999999999999999999999999999998876554
No 99
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.54 E-value=1.7e-07 Score=98.98 Aligned_cols=114 Identities=24% Similarity=0.195 Sum_probs=71.3
Q ss_pred hhHhhhhccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCccccccc--------------------ccCcc-
Q 006573 517 ETENMLARGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLT--------------------HFNSE- 575 (640)
Q Consensus 517 ~~~~rl~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~--------------------~~~~~- 575 (640)
+.+..+..-+.....++|+|+..|+.+.++.++.++..+|.....|.||||.|+ ..++.
T Consensus 70 e~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~ 149 (854)
T KOG0507|consen 70 DYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKE 149 (854)
T ss_pred cchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccc
Confidence 333333333345556666666666666666666666666666666666663110 00000
Q ss_pred ---cccccccchhHHHHHHhhc-----------------ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccce
Q 006573 576 ---FFSIPISCNNVIKFLLFNL-----------------FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTK 630 (640)
Q Consensus 576 ---~~~~~~~~~~~~~~L~~~~-----------------~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~ 630 (640)
..+.-++..++|..|++.. +.+|+|.|+++||.++++.|+++|.|+|.+...|+.
T Consensus 150 t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~gta 224 (854)
T KOG0507|consen 150 TVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDGTA 224 (854)
T ss_pred cHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccchh
Confidence 2444455566666666541 334799999999999999999999999999888864
No 100
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.53 E-value=1.1e-07 Score=92.06 Aligned_cols=108 Identities=31% Similarity=0.250 Sum_probs=91.3
Q ss_pred CCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcc------------c
Q 006573 529 LPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLF------------Y 596 (640)
Q Consensus 529 l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~------------~ 596 (640)
...+.+.++..+....++.++..|++++.+|.+|.||||.|...+.. ..++.+++++|++.++ .
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~----~~~~~~~~~~ll~~g~~~~~~~~~~~~g~ 148 (235)
T COG0666 73 GRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNP----PEGNIEVAKLLLEAGADLDVNNLRDEDGN 148 (235)
T ss_pred ccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCc----ccchHHHHHHHHHcCCCCCCccccCCCCC
Confidence 45667788888999999999999999999999999999444443321 3333899999998876 2
Q ss_pred chhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 597 FKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 597 ~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
+|+|+|+..|+.+++++|++.|++++.++..|.+++..+....|
T Consensus 149 tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~ 192 (235)
T COG0666 149 TPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGR 192 (235)
T ss_pred chhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccch
Confidence 38999999999999999999999999999999999999887654
No 101
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.53 E-value=4.2e-08 Score=112.32 Aligned_cols=104 Identities=17% Similarity=0.012 Sum_probs=72.1
Q ss_pred CCCCCccee-eeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhh-----------
Q 006573 526 RMDLPLSLC-FAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFN----------- 593 (640)
Q Consensus 526 ~~~l~~~l~-~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~----------- 593 (640)
+..+.+++| .|+..++.++++.|+.+|+ .+..|+||||.|...+.+ +...+++.+...
T Consensus 49 d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~------~v~~ll~~l~~~~~~~~~~~~~~ 118 (743)
T TIGR00870 49 DRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYVD------AVEAILLHLLAAFRKSGPLELAN 118 (743)
T ss_pred CccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccHH------HHHHHHHHHhhcccccCchhhhc
Confidence 345567788 6777777788888887775 566788888554432111 111222222221
Q ss_pred --------cccchhhHhhcCCCHHHHHHHHhccCCCCCCC--------------cccceeeeeecccc
Q 006573 594 --------LFYFKQHIAASKGSENCVLLLLDYEADPNSIG--------------MLVTKYIIRFFGFV 639 (640)
Q Consensus 594 --------~~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~--------------~~g~~~~~~~~~~~ 639 (640)
.+.+|||+||..|+.++|++|+++|||+|.++ .+|++||+-|....
T Consensus 119 ~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~ 186 (743)
T TIGR00870 119 DQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLG 186 (743)
T ss_pred cccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhC
Confidence 26789999999999999999999999999764 36889988765443
No 102
>PHA02741 hypothetical protein; Provisional
Probab=98.50 E-value=1.3e-07 Score=86.93 Aligned_cols=94 Identities=15% Similarity=0.147 Sum_probs=79.4
Q ss_pred ccCCCCCcceeeeeecCC----HHHHHHHHhcCCCCCCCCC-CCCcccccccccCcccccccccchhHHHHHHhh-c---
Q 006573 524 RGRMDLPLSLCFAALRGD----DLLLHQLLKRGLDPNESDN-NGRTALVCLTHFNSEFFSIPISCNNVIKFLLFN-L--- 594 (640)
Q Consensus 524 ~g~~~l~~~l~~a~~~g~----~~~v~~Ll~~g~~~n~~d~-~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~-~--- 594 (640)
..+....+++|.|+..|+ .++++.|+..|+++|.+|. .|+||| |.++..+..+++++|+.. +
T Consensus 55 ~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpL---------h~A~~~~~~~iv~~Ll~~~g~~~ 125 (169)
T PHA02741 55 ATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTAL---------HLAAHRRDHDLAEWLCCQPGIDL 125 (169)
T ss_pred ccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHH---------HHHHHcCCHHHHHHHHhCCCCCC
Confidence 334456788999999998 5889999999999999985 899999 777777889999999974 3
Q ss_pred ------ccchhhHhhcCCCHHHHHHHHhccCCCCCCCc
Q 006573 595 ------FYFKQHIAASKGSENCVLLLLDYEADPNSIGM 626 (640)
Q Consensus 595 ------~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~ 626 (640)
+.+|+|.|+..|+.+++++|++.++..+.-++
T Consensus 126 ~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~~~~~~ 163 (169)
T PHA02741 126 HFCNADNKSPFELAIDNEDVAMMQILREIVATSRGFSN 163 (169)
T ss_pred CcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHhcCccc
Confidence 66799999999999999999999887654443
No 103
>KOG3684 consensus Ca2+-activated K+ channel proteins (intermediate/small conductance classes) [Inorganic ion transport and metabolism]
Probab=98.45 E-value=2.7e-06 Score=85.39 Aligned_cols=88 Identities=19% Similarity=0.283 Sum_probs=70.9
Q ss_pred hHHHHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHh
Q 006573 247 LWIRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQR 326 (640)
Q Consensus 247 ~~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (640)
.-..|..|+|....|+.++||||++|.|..|+.+++++-++|.++.|.+++.|+.-+.. .+--+.+++||-.
T Consensus 284 ~~~~~~nsmWli~iTFlsiGYGDiVP~TycGr~v~l~tGivGa~~sallvAvisRKLeL--------t~aEKhVhNFMmD 355 (489)
T KOG3684|consen 284 VTINYLNSMWLIAITFLSIGYGDIVPNTYCGRGVALLTGIVGAGCSSLLVAVIARKLEL--------TKAEKHVHNFMMD 355 (489)
T ss_pred hHHHHHhhHHHHHHHHhhcccCcccCCccccchHHHHhhhhhhhHHHHHHHHHHHHHHH--------HHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999999999999999999755533 3333467778877
Q ss_pred CCCCHHHHHHHHHHHH
Q 006573 327 NQLPIRLQDQMLAHLC 342 (640)
Q Consensus 327 ~~l~~~l~~rv~~y~~ 342 (640)
.++.+++++-.-+-++
T Consensus 356 tqLTk~~KnAAA~VLq 371 (489)
T KOG3684|consen 356 TQLTKEHKNAAANVLQ 371 (489)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777766654443333
No 104
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.40 E-value=1.5e-07 Score=94.92 Aligned_cols=81 Identities=26% Similarity=0.245 Sum_probs=43.0
Q ss_pred eeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccchhhHhhcCC
Q 006573 536 AALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFKQHIAASKG 606 (640)
Q Consensus 536 a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~~h~a~~~g 606 (640)
|+.+|..++|+..+..-.|+...+..|-||| |=++-.++.+||+||+++| ||+|||+||+-+
T Consensus 557 aaLeGEldlVq~~i~ev~DpSqpNdEGITaL---------HNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCN 627 (752)
T KOG0515|consen 557 AALEGELDLVQRIIYEVTDPSQPNDEGITAL---------HNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCN 627 (752)
T ss_pred hhhcchHHHHHHHHHhhcCCCCCCccchhHH---------hhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcC
Confidence 4445555555554444444444444555555 2222222233333333332 233338888888
Q ss_pred CHHHHHHHHhccCCCCCCC
Q 006573 607 SENCVLLLLDYEADPNSIG 625 (640)
Q Consensus 607 ~~~~~~~L~~~ga~~~~~~ 625 (640)
+.-+++.|+++||.+-+..
T Consensus 628 nv~~ckqLVe~GaavfAsT 646 (752)
T KOG0515|consen 628 NVPMCKQLVESGAAVFAST 646 (752)
T ss_pred chHHHHHHHhccceEEeee
Confidence 8888888888888776643
No 105
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.35 E-value=1.9e-07 Score=75.72 Aligned_cols=63 Identities=25% Similarity=0.106 Sum_probs=53.6
Q ss_pred cccccccchhHHHHHHhhc-----ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccc
Q 006573 576 FFSIPISCNNVIKFLLFNL-----FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGF 638 (640)
Q Consensus 576 ~~~~~~~~~~~~~~L~~~~-----~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~ 638 (640)
+.++..+..++++.|++.+ +.+|+|+|+..|+.+++++|+++|+++|.+|..|+||++.|...
T Consensus 2 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 69 (89)
T PF12796_consen 2 HIAAQNGNLEILKFLLEKGADINLGNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAEN 69 (89)
T ss_dssp HHHHHTTTHHHHHHHHHTTSTTTSSSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHc
Confidence 3456667788999999875 35789999999999999999999999999999999999987654
No 106
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.34 E-value=4.3e-07 Score=90.14 Aligned_cols=80 Identities=19% Similarity=0.200 Sum_probs=69.6
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCC-CCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccc
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNES-DNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYF 597 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~-d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~ 597 (640)
.+.+|+|+|+..|+.++++.|+++|+|+|.+ +..|.||| +.++..++.+++++|+++| +.+
T Consensus 69 ~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpL---------h~Aa~~~~~eivklLL~~GAdin~kd~~G~T 139 (300)
T PHA02884 69 SKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPL---------YISVLHGCLKCLEILLSYGADINIQTNDMVT 139 (300)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHH---------HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence 5678999999999999999999999999986 46799999 7777778899999999997 567
Q ss_pred hhhHhhcCCCHHHHHHHHh
Q 006573 598 KQHIAASKGSENCVLLLLD 616 (640)
Q Consensus 598 ~~h~a~~~g~~~~~~~L~~ 616 (640)
|+|.|+..++.+++.++.+
T Consensus 140 pL~~A~~~~~~~~~~~~~~ 158 (300)
T PHA02884 140 PIELALMICNNFLAFMICD 158 (300)
T ss_pred HHHHHHHhCChhHHHHhcC
Confidence 9999999888887766653
No 107
>PF08412 Ion_trans_N: Ion transport protein N-terminal; InterPro: IPR013621 This domain is found to the N terminus of IPR005821 from INTERPRO in voltage- and cyclic nucleotide-gated K/Na ion channels.
Probab=98.34 E-value=6e-07 Score=68.41 Aligned_cols=46 Identities=20% Similarity=0.559 Sum_probs=41.0
Q ss_pred cccccCCCeEEcCCChhHHHHHHHHHHHHHHHHHHhhhheecccCC
Q 006573 47 NRRVKLRRFIVSPYDRRYRVWETYLVLLVIYTAWASPFEFGFLRKP 92 (640)
Q Consensus 47 ~~~~~~~~~~~~P~s~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~~ 92 (640)
+++.+...++|||+|+++.+||++++++++++++++|+.++|..+.
T Consensus 29 ~R~~~~~~~IIHP~S~fR~~WD~~m~~~~~~~~~~iP~~isF~~d~ 74 (77)
T PF08412_consen 29 ERQRSSGPWIIHPFSKFRFYWDLIMLILLLYNLIIIPFRISFFSDE 74 (77)
T ss_pred HHHhcCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHhhhheEecCc
Confidence 4456677889999999999999999999999999999999997654
No 108
>KOG2302 consensus T-type voltage-gated Ca2+ channel, pore-forming alpha1I subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.33 E-value=1.5e-05 Score=86.29 Aligned_cols=121 Identities=19% Similarity=0.310 Sum_probs=73.5
Q ss_pred CCeEEcCCChhH---------HHHHHHHHHHHHHHHHHhhhheecccCC---CCCeeehh-hHhhHHHhhhheeeeeE-E
Q 006573 53 RRFIVSPYDRRY---------RVWETYLVLLVIYTAWASPFEFGFLRKP---QRPLSVID-NVVNGFFAVDIILTFFV-A 118 (640)
Q Consensus 53 ~~~~~~P~s~~~---------~~w~~~~~~~~~~~~~~~p~~~~f~~~~---~~~~~~i~-~~~~~~f~~d~~l~f~t-~ 118 (640)
-.+++.|.++|+ ..++.+++++++++++++..+. +...+ ...+..++ +++.++|+.|+.++... +
T Consensus 1103 s~ylF~pQ~rFR~lc~~ii~hk~Fd~vVl~~IfLNcVtialer-p~i~~~s~EriFltlsnyIFtaIfV~Em~lKVVALG 1181 (1956)
T KOG2302|consen 1103 SKYLFSPQNRFRVLCQNIIQHKAFDTVVLFFIFLNCVTIALER-PAIVEGSTERIFLTLSNYIFTAIFVVEMTLKVVALG 1181 (1956)
T ss_pred HHHhcCcccHHHHHHHHHHHHhhhhheehhhhhhhhHHHHhcc-cccccCcceEEEEEecchHHHHHHHHHHHHHHHhhh
Confidence 346789999887 4678888899999999988776 32222 12344455 89999999999988633 2
Q ss_pred EEeCCceEEEeChhHHHHHHhhh-hhhhHhHhhccH--HHHhhh-CCCCccchhhhhHHHHHHHHHHHHHHH
Q 006573 119 YLDKATYLLVDCPKQIAWKYASS-WLVFDVISTIPS--ELAQKI-SPKPLQSYGLFNMLRLWRLRRVSALFS 186 (640)
Q Consensus 119 ~~~~~~~~~v~~~~~i~~~Yl~~-~f~~Dlis~lP~--~~~~~~-~~~~~~~~~~l~~lrllrl~r~~~~~~ 186 (640)
.+-. + ..|+++ |+.+|.+-++-- +++... .....+.++++|.+|++|-+|..|.++
T Consensus 1182 l~fg----------e--~aYl~ssWN~LDgflv~vsviDilvs~asa~g~kILgVlrvLRlLRtlRpLRviS 1241 (1956)
T KOG2302|consen 1182 LYFG----------E--QAYLRSSWNVLDGFLVAVSVIDILVSQASAGGAKILGVLRVLRLLRTLRPLRVIS 1241 (1956)
T ss_pred hccc----------h--HHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhHHHHHh
Confidence 1111 1 778855 888886644322 222111 111224455555555555555555543
No 109
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.33 E-value=2.6e-07 Score=105.79 Aligned_cols=104 Identities=13% Similarity=-0.000 Sum_probs=86.0
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCCC--------------CCCCcccccccccCcccccccccchhHHHHHHhh
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNESD--------------NNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFN 593 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d--------------~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~ 593 (640)
.+.+|+|.|+..|+.++++.|+++|+|+|.++ ..|+||| +.++..++.+++++|+++
T Consensus 127 ~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL---------~~Aa~~~~~~iv~lLl~~ 197 (743)
T TIGR00870 127 PGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPL---------NAAACLGSPSIVALLSED 197 (743)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHH---------HHHHHhCCHHHHHHHhcC
Confidence 46789999999999999999999999998653 2589999 777888889999999998
Q ss_pred c---------ccchhhHhhcCC---------CHHHHHHHHhccCCC-------CCCCcccceeeeeeccccC
Q 006573 594 L---------FYFKQHIAASKG---------SENCVLLLLDYEADP-------NSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 594 ~---------~~~~~h~a~~~g---------~~~~~~~L~~~ga~~-------~~~~~~g~~~~~~~~~~~~ 640 (640)
+ +.+|+|+|+..+ ...+.+++++.|++. +.+|.+|.||+..|....|
T Consensus 198 gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~ 269 (743)
T TIGR00870 198 PADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGR 269 (743)
T ss_pred CcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCC
Confidence 7 566899999987 345667777777665 6679999999998876543
No 110
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.33 E-value=3.4e-07 Score=92.52 Aligned_cols=79 Identities=22% Similarity=0.213 Sum_probs=64.0
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccc------hhhH
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYF------KQHI 601 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~------~~h~ 601 (640)
++-+++|.|+-.|+.++|++|+..|+|+|+.|.+|+||| |++++.+++-+++.|+++|+-+ ..--
T Consensus 582 EGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPL---------HCAASCNnv~~ckqLVe~GaavfAsTlSDmeT 652 (752)
T KOG0515|consen 582 EGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPL---------HCAASCNNVPMCKQLVESGAAVFASTLSDMET 652 (752)
T ss_pred cchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchh---------hhhhhcCchHHHHHHHhccceEEeeecccccc
Confidence 456778889999999999999999999999999999999 7777777899999999998544 1222
Q ss_pred hh------cCCCHHHHHHHH
Q 006573 602 AA------SKGSENCVLLLL 615 (640)
Q Consensus 602 a~------~~g~~~~~~~L~ 615 (640)
|+ ..|-.+|.++|-
T Consensus 653 a~eKCee~eeGY~~CsqyL~ 672 (752)
T KOG0515|consen 653 AAEKCEEMEEGYDQCSQYLY 672 (752)
T ss_pred hhhhcchhhhhHHHHHHHHH
Confidence 22 345667888875
No 111
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.31 E-value=4.2e-07 Score=85.21 Aligned_cols=77 Identities=26% Similarity=0.234 Sum_probs=61.5
Q ss_pred hhccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCC-CCCCCcccccccccCcccccccccchhHHHHHHhhcccchhh
Q 006573 522 LARGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNES-DNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQH 600 (640)
Q Consensus 522 l~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~-d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h 600 (640)
++..+-.+..++..|+..|+.+.++.+++.|+|+|.. +..+.||| |
T Consensus 38 vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpL---------------------------------m 84 (396)
T KOG1710|consen 38 VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPL---------------------------------M 84 (396)
T ss_pred hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHH---------------------------------H
Confidence 4555556677778888888888888888888887753 45677787 9
Q ss_pred HhhcCCCHHHHHHHHhccCCCCCCCccccee
Q 006573 601 IAASKGSENCVLLLLDYEADPNSIGMLVTKY 631 (640)
Q Consensus 601 ~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~ 631 (640)
.||..|+.++.++|++.||.+...+.-|+|.
T Consensus 85 FAALSGn~dvcrllldaGa~~~~vNsvgrTA 115 (396)
T KOG1710|consen 85 FAALSGNQDVCRLLLDAGARMYLVNSVGRTA 115 (396)
T ss_pred HHHHcCCchHHHHHHhccCccccccchhhhH
Confidence 9999999999999999999988888888774
No 112
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.29 E-value=2.9e-07 Score=91.86 Aligned_cols=80 Identities=30% Similarity=0.408 Sum_probs=71.7
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCC
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGS 607 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~ 607 (640)
+...++++|+..|+...++++.-.|.|++.+|.+.||+| |+||..|+
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaL---------------------------------HvAAaEG~ 551 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTAL---------------------------------HVAAAEGH 551 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhh---------------------------------eeecccCc
Confidence 344678899999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHhc-cCCCCCCCcccceeeeeeccccC
Q 006573 608 ENCVLLLLDY-EADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 608 ~~~~~~L~~~-ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
.+++++|++. +.|++.+|.+|++||=-|--+-|
T Consensus 552 v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h 585 (622)
T KOG0506|consen 552 VEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKH 585 (622)
T ss_pred eeHHHHHHHHHcCCCChhhccCCCcchHhHhcCc
Confidence 9999999986 89999999999999866655444
No 113
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.26 E-value=5.6e-07 Score=95.24 Aligned_cols=101 Identities=22% Similarity=0.149 Sum_probs=90.6
Q ss_pred CCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------cc
Q 006573 526 RMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FY 596 (640)
Q Consensus 526 ~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~ 596 (640)
+...-+.+|.|+.+|+.++++.|++..+-.+..|..|.+|| |++++.|..++|+.|+.++ +.
T Consensus 46 d~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~pl---------hlaaw~g~~e~vkmll~q~d~~na~~~e~~ 116 (854)
T KOG0507|consen 46 DYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPL---------HLAAWNGNLEIVKMLLLQTDILNAVNIENE 116 (854)
T ss_pred CccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceE---------EehhhcCcchHHHHHHhcccCCCcccccCc
Confidence 33455668889999999999999999998899999999999 9999999999999999874 56
Q ss_pred chhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeee
Q 006573 597 FKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRF 635 (640)
Q Consensus 597 ~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~ 635 (640)
+|||.|+..||.|++.+|+++|||+-.+|+.+.+|+=-|
T Consensus 117 tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA 155 (854)
T KOG0507|consen 117 TPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLA 155 (854)
T ss_pred CccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHH
Confidence 689999999999999999999999999999999987433
No 114
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.23 E-value=9e-07 Score=90.42 Aligned_cols=90 Identities=27% Similarity=0.245 Sum_probs=75.5
Q ss_pred hhhhhhHhhhhccCC------CCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhH
Q 006573 513 GVLLETENMLARGRM------DLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNV 586 (640)
Q Consensus 513 ~~~~~~~~rl~~g~~------~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~ 586 (640)
.++.+...++..|.. .+.+.+|.|+..|..++.+.|+..|.+++.+|.+|+|||
T Consensus 176 ~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPl-------------------- 235 (527)
T KOG0505|consen 176 TMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPL-------------------- 235 (527)
T ss_pred HHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcc--------------------
Confidence 344455555444422 235667889999999999999999999999999999999
Q ss_pred HHHHHhhcccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeee
Q 006573 587 IKFLLFNLFYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRF 635 (640)
Q Consensus 587 ~~~L~~~~~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~ 635 (640)
|.||.=|+.+++++|++|||+.+++...|.+|+=.+
T Consensus 236 -------------HAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~ 271 (527)
T KOG0505|consen 236 -------------HAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVA 271 (527)
T ss_pred -------------cHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccch
Confidence 999999999999999999999999999999997543
No 115
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.22 E-value=1.5e-06 Score=78.64 Aligned_cols=60 Identities=12% Similarity=-0.023 Sum_probs=53.6
Q ss_pred CCCcceeeeeecCCHHHHHHHHh-cCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhccc
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLK-RGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFY 596 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~-~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 596 (640)
.+.+++|+|+..|+.++++.|+. .|+++|.+|..|+||| ++++..+..+++++|+.+|+.
T Consensus 91 ~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL---------~~A~~~~~~~i~~~Ll~~ga~ 151 (154)
T PHA02736 91 FGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPY---------YVACERHDAKMMNILRAKGAQ 151 (154)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHH---------HHHHHcCCHHHHHHHHHcCCC
Confidence 56788999999999999999997 4999999999999999 777777889999999998754
No 116
>PF01007 IRK: Inward rectifier potassium channel; InterPro: IPR013521 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. Inwardly-rectifying potassium channels (Kir) are the principal class of two-TM domain potassium channels. They are characterised by the property of inward-rectification, which is described as the ability to allow large inward currents and smaller outward currents. Inwardly rectifying potassium channels (Kir) are responsible for regulating diverse processes including: cellular excitability, vascular tone, heart rate, renal salt flow, and insulin release []. To date, around twenty members of this superfamily have been cloned, which can be grouped into six families by sequence similarity, and these are designated Kir1.x-6.x [, ]. Cloned Kir channel cDNAs encode proteins of between ~370-500 residues, both N- and C-termini are thought to be cytoplasmic, and the N terminus lacks a signal sequence. Kir channel alpha subunits possess only 2TM domains linked with a P-domain. Thus, Kir channels share similarity with the fifth and sixth domains, and P-domain of the other families. It is thought that four Kir subunits assemble to form a tetrameric channel complex, which may be hetero- or homomeric [].; PDB: 3AT9_A 3AUW_D 3SYA_A 3ATE_A 3SYQ_A 3SYO_A 3ATB_A 3SYC_A 3AT8_A 3ATA_A ....
Probab=98.20 E-value=8.7e-06 Score=82.07 Aligned_cols=98 Identities=21% Similarity=0.308 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC-----ccccccccCCCccCcchHHHHHHHHHhhhhhhcccccCC--cccCCc
Q 006573 203 KLIFVTLFAVHCAGCFYYLLAARYHNPE-----RTWIGASLGQNFLEKSLWIRYVTSMYWSITTLTTVGYGD--LHPVNT 275 (640)
Q Consensus 203 ~l~~~~~~~~h~~ac~~~~~~~~~~~~~-----~~W~~~~~~~~~~~~~~~~~y~~s~yw~~~t~ttvGygd--~~p~t~ 275 (640)
.+++.+++..-+||++||.++....+-. ..|- ........+..||++++.|+||+|||. ++|..+
T Consensus 40 ~f~~~y~~~~~~Fa~~y~~i~~~~gdl~~~~~~~~~~--------~Cv~~~~~f~~aF~FSveT~tTIGYG~~~~~~~c~ 111 (336)
T PF01007_consen 40 LFVLSYLLSWLFFALLYYLIAYSHGDLEPIHADSNWT--------PCVSNVNSFTSAFLFSVETQTTIGYGSRYPTPECP 111 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCCTTTSBTTS---------TSECT-TTHHHHHHHHHHHHTT---SSSEB-CSHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcccchhcccccCCC--------CceecccchhhheeEEEEEEEEeccCCcccCCCcc
Confidence 3445566677888999999886432211 1111 111234689999999999999999998 678888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q 006573 276 REMVFDILFMLFNLGLTAYLIGNMTNLVVHGTS 308 (640)
Q Consensus 276 ~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~ 308 (640)
...++.++-+++|+++.|+.+|.+.+-+++-.+
T Consensus 112 ~a~~l~~~q~~~g~l~~a~~~Glvfar~srP~~ 144 (336)
T PF01007_consen 112 YAIFLVTIQSLVGLLLDAFMTGLVFARFSRPKK 144 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 999999999999999999999999988876543
No 117
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.11 E-value=2.1e-06 Score=92.15 Aligned_cols=92 Identities=22% Similarity=0.088 Sum_probs=65.5
Q ss_pred CCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhh-----cccchhhH
Q 006573 527 MDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFN-----LFYFKQHI 601 (640)
Q Consensus 527 ~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~~h~ 601 (640)
..+.+++|.|+.+.+.+.|+.|++.|||++++-. |.--. +.=++ ... ..-.+ =|.+||-.
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~-G~FF~--~~dqk---~~r---------k~T~Y~G~~YfGEyPLSf 246 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLAAGADVHARAC-GAFFC--PDDQK---ASR---------KSTNYTGYFYFGEYPLSF 246 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHHcCCchhhHhh-ccccC--ccccc---ccc---------cccCCcceeeeccCchHH
Confidence 4456778889999999999999999999987642 21111 00000 000 00011 13447799
Q ss_pred hhcCCCHHHHHHHHhccCCCCCCCcccceeee
Q 006573 602 AASKGSENCVLLLLDYEADPNSIGMLVTKYII 633 (640)
Q Consensus 602 a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~ 633 (640)
||--|+.|++++|+++|||+|++|.+|+|-|+
T Consensus 247 AAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH 278 (782)
T KOG3676|consen 247 AACTNQPEIVRLLLAHGADPNAQDSNGNTVLH 278 (782)
T ss_pred HHHcCCHHHHHHHHhcCCCCCccccCCChHHH
Confidence 99999999999999999999999999998664
No 118
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=98.07 E-value=2.4e-05 Score=84.61 Aligned_cols=139 Identities=15% Similarity=0.214 Sum_probs=102.1
Q ss_pred CCCeEEEeCCCCCeEEEEEeceEEEEEe---eC----CceEEEEEecCCCeeechhhhcCCCeeeEEEEccceEEEEeeH
Q 006573 406 PKEDVILQNEAPTDFYILVTGAVDLLVL---KN----GVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLLRLNR 478 (640)
Q Consensus 406 ~ge~i~~~g~~~~~ly~I~~G~v~v~~~---~~----g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~~i~~ 478 (640)
..++|.++|+....+|++.+|.+.++.. .. ..+..+-.++||+++|.+++++|.|...+++|.++|.+..+++
T Consensus 393 eitiiv~q~a~~~gl~~ii~g~l~v~~sm~~~s~~~~~~~~~~f~v~pG~ivgyla~lt~e~S~~tirArsdt~v~~isr 472 (1158)
T KOG2968|consen 393 EITIIVEQGARDVGLYYIIKGSLSVYQSMYDVSGNLVLAGMLLFVVGPGEIVGYLAILTNEPSFITIRARSDTRVLFISR 472 (1158)
T ss_pred ceEEEEecccccceeeEEeecceeeeehhcccccccccccceEEEecCCceechhhhhcCCcceEEEEEecceEEEEeeH
Confidence 3466899999999999999999988762 11 1223566889999999999999999999999999999999999
Q ss_pred HHHHHHHHhchhh----HHHHHHHHHHHHHcccchhhhhhhhhhHhhhhccCCCCCcceeeeeecCCHHHHHH
Q 006573 479 TTFLNIVQANVGD----GTIIMNNLLQHLKDLKDPIMEGVLLETENMLARGRMDLPLSLCFAALRGDDLLLHQ 547 (640)
Q Consensus 479 ~~f~~ll~~~~~~----~~~~~~~l~~~l~~~~~~~~~~~~~~~~~rl~~g~~~l~~~l~~a~~~g~~~~v~~ 547 (640)
.+|.+++.++|.. ...+.+.+...+...........+........+|+.... .+.+..|..+.+..
T Consensus 473 s~l~~~~~~~p~I~L~ia~svl~~lsp~lr~~D~AldWv~l~~g~alyrqgD~Sd~---iyvVl~GRlRsv~~ 542 (1158)
T KOG2968|consen 473 SDLERFLDAEPLIYLRIAHSVLRRLSPFLRKLDFALDWVRLEPGQALYRQGDSSDS---IYVVLNGRLRSVIR 542 (1158)
T ss_pred HHHHHHHHhCceEEEehhhHHHHhcCHHHhhhhhhcceEEeccccHHHhcCCccCc---EEEEecCeehhhhh
Confidence 9999999999954 444444444444333322222334455556667775544 56778887766644
No 119
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]
Probab=97.93 E-value=7.2e-05 Score=72.02 Aligned_cols=60 Identities=25% Similarity=0.468 Sum_probs=48.4
Q ss_pred HHHHHHHhhhhhhcccccCCcccCC--------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchh
Q 006573 250 RYVTSMYWSITTLTTVGYGDLHPVN--------TREMVFDILFMLFNLGLTAYLIGNMTNLVVHGTSR 309 (640)
Q Consensus 250 ~y~~s~yw~~~t~ttvGygd~~p~t--------~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~ 309 (640)
+|.+|+|++++|+||+|+||.++-- +.-+.++.+.+++|+.+++-.++.+.-.+..++..
T Consensus 186 syfds~YyCFITltTIGFGDyValQ~~~alq~qplYv~~sf~fIL~Gl~vi~a~~NllvLrf~t~~~~ 253 (350)
T KOG4404|consen 186 SYFDSYYYCFITLTTIGFGDYVALQQDAALQSQPLYVFFSFVFILLGLCVIYALLNLLVLRFMTMNAE 253 (350)
T ss_pred chhhhhheeeeeeeeccccchhhhcchhhhhCCCceehHhHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 7899999999999999999998732 23456778888999999988888887777665543
No 120
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.86 E-value=1.5e-05 Score=87.55 Aligned_cols=111 Identities=19% Similarity=0.149 Sum_probs=82.3
Q ss_pred CCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccc-cC--------------------ccc----cccc
Q 006573 526 RMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTH-FN--------------------SEF----FSIP 580 (640)
Q Consensus 526 ~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~-~~--------------------~~~----~~~~ 580 (640)
+....+++..||..|+.+.++.|+.+|+++..+|..|.+||+.|+- .+ ++. ++..
T Consensus 754 e~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacs 833 (2131)
T KOG4369|consen 754 EPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACS 833 (2131)
T ss_pred CccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecC
Confidence 3456688899999999999999999999999999999999952211 11 111 2333
Q ss_pred ccchhHHHHHHhhc---------ccchhhHhhcCCCHHHHHHHHhccCCCCCCC--cccceeeeeec
Q 006573 581 ISCNNVIKFLLFNL---------FYFKQHIAASKGSENCVLLLLDYEADPNSIG--MLVTKYIIRFF 636 (640)
Q Consensus 581 ~~~~~~~~~L~~~~---------~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~--~~g~~~~~~~~ 636 (640)
-+..++|++|+.+| +|+||-.|...|-.+++++|+.+|+.+|.+. +.|.-||+-+-
T Consensus 834 ggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlat 900 (2131)
T KOG4369|consen 834 GGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLAT 900 (2131)
T ss_pred CCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhh
Confidence 34477788888774 6778888888888888888888888888763 57777776543
No 121
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=97.85 E-value=5.3e-06 Score=60.34 Aligned_cols=43 Identities=33% Similarity=0.436 Sum_probs=28.4
Q ss_pred ccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCccc
Q 006573 524 RGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTAL 566 (640)
Q Consensus 524 ~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L 566 (640)
..+..+.+++|+|+..|+.++++.|++.|+|++.+|..|+|||
T Consensus 11 ~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl 53 (56)
T PF13857_consen 11 AQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPL 53 (56)
T ss_dssp ---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HH
T ss_pred CcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHH
Confidence 3445667999999999999999999999999999999999999
No 122
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.81 E-value=1.2e-05 Score=80.98 Aligned_cols=76 Identities=26% Similarity=0.160 Sum_probs=67.0
Q ss_pred ceeeeeecCCHHHHHHHHhcCCCCCCCC-CCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCCHHH
Q 006573 532 SLCFAALRGDDLLLHQLLKRGLDPNESD-NNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGSENC 610 (640)
Q Consensus 532 ~l~~a~~~g~~~~v~~Ll~~g~~~n~~d-~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~~~~ 610 (640)
.+|..+..|+.+..-+|+..|+++|-.+ ..|.||| |+||+.|+..=
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpL---------------------------------HvAAk~Gq~~Q 182 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPL---------------------------------HVAAKAGQILQ 182 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchh---------------------------------HHHHhccchhh
Confidence 3556788899999889999999999776 4799999 99999999999
Q ss_pred HHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 611 VLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 611 ~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
+++|.=+|||+++.|.+|.+|+.-|=..+|
T Consensus 183 ~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH 212 (669)
T KOG0818|consen 183 AELLAVYGADPGAQDSSGMTPVDYARQGGH 212 (669)
T ss_pred hhHHhhccCCCCCCCCCCCcHHHHHHhcCc
Confidence 999999999999999999999986655554
No 123
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=97.78 E-value=1.7e-05 Score=68.35 Aligned_cols=74 Identities=28% Similarity=0.184 Sum_probs=63.3
Q ss_pred CCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcc
Q 006573 557 ESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFKQHIAASKGSENCVLLLLDYEADPNSIGML 627 (640)
Q Consensus 557 ~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~ 627 (640)
..|.+|.||| +.++..+..++++.|+..+ +.+|+|.|+..++.++++.|+++|++++..+..
T Consensus 2 ~~~~~g~t~l---------~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 72 (126)
T cd00204 2 ARDEDGRTPL---------HLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKD 72 (126)
T ss_pred CcCcCCCCHH---------HHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCC
Confidence 4567899999 6666667789999999775 445899999999999999999999999999999
Q ss_pred cceeeeeecccc
Q 006573 628 VTKYIIRFFGFV 639 (640)
Q Consensus 628 g~~~~~~~~~~~ 639 (640)
|.+|++.++...
T Consensus 73 ~~~~l~~a~~~~ 84 (126)
T cd00204 73 GNTPLHLAARNG 84 (126)
T ss_pred CCCHHHHHHHcC
Confidence 999998876543
No 124
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.78 E-value=3e-05 Score=82.92 Aligned_cols=72 Identities=26% Similarity=0.239 Sum_probs=66.7
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCCCC-CCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCC
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNESDN-NGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKG 606 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~-~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g 606 (640)
-++..+|.++..|...+++.|+.+|+|++.+|. .|.||| |-|...|
T Consensus 51 ~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taL---------------------------------HRaiyyG 97 (1267)
T KOG0783|consen 51 YGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTAL---------------------------------HRAIYYG 97 (1267)
T ss_pred hccceeeeeeccchhHHHHHHHhcCceeeeccccccchHh---------------------------------hHhhhhc
Confidence 346677889999999999999999999999986 799999 9999999
Q ss_pred CHHHHHHHHhccCCCCCCCcccceee
Q 006573 607 SENCVLLLLDYEADPNSIGMLVTKYI 632 (640)
Q Consensus 607 ~~~~~~~L~~~ga~~~~~~~~g~~~~ 632 (640)
+.||+-+|+.+|+.+..+|+.|.-|+
T Consensus 98 ~idca~lLL~~g~SL~i~Dkeglspl 123 (1267)
T KOG0783|consen 98 NIDCASLLLSKGRSLRIKDKEGLSPL 123 (1267)
T ss_pred hHHHHHHHHhcCCceEEecccCCCHH
Confidence 99999999999999999999999886
No 125
>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism]
Probab=97.71 E-value=3.5e-05 Score=82.59 Aligned_cols=57 Identities=25% Similarity=0.614 Sum_probs=53.0
Q ss_pred HHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006573 250 RYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVVHG 306 (640)
Q Consensus 250 ~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~ 306 (640)
.+..|+|++.+++||+|||+++|.|..|++++++..++|+-++..+++.++..+...
T Consensus 115 ~f~~al~fs~tv~TTIGYG~i~P~T~~Gr~~~i~YaliGIPl~li~l~~~g~~l~~~ 171 (433)
T KOG1418|consen 115 SFSSALLFSITVITTIGYGNIAPRTDAGRLFTILYALVGIPLMLLILADIGKFLADS 171 (433)
T ss_pred ecchhHhhhhheeeeccCCcccCCcCcchhHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999999999999999999988777544
No 126
>PLN03223 Polycystin cation channel protein; Provisional
Probab=97.70 E-value=0.0017 Score=73.99 Aligned_cols=120 Identities=8% Similarity=-0.017 Sum_probs=61.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCccCcch
Q 006573 168 GLFNMLRLWRLRRVSALFSRLEKDRNYNYFWVRCCKLIFVTLFAVHCAGCFYYLLAARYHNPERTWIGASLGQNFLEKSL 247 (640)
Q Consensus 168 ~~l~~lrllrl~r~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~h~~ac~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 247 (640)
-++.++|++|++|+.+-+..+..++.... ..++.+++++++++..+|.+-+++.- ...+.
T Consensus 1299 IFLsiLKfLRLLRFNPrL~vLt~TLrrAa--pDLa~F~IIF~IVF~AFAqLG~LLFG------------------t~ve~ 1358 (1634)
T PLN03223 1299 IILLLGRILKLMDFQPRLGVITRTLWLAG--ADLMHFFVIFGMVFVGYAFIGHVIFG------------------NASVH 1358 (1634)
T ss_pred HHHHHHHHHHHhccChhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhc------------------cCchh
Confidence 34556666666666666666655544333 24555555555554444433333220 12234
Q ss_pred HHHHHHHHHhhhhhhccccc---CCcccC----Cchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 006573 248 WIRYVTSMYWSITTLTTVGY---GDLHPV----NTREM-VFDILFMLFNLGLTAYLIGNMTNLVVHGT 307 (640)
Q Consensus 248 ~~~y~~s~yw~~~t~ttvGy---gd~~p~----t~~e~-~~~i~~~i~g~~~~a~~i~~i~~~~~~~~ 307 (640)
|.++..|++--+..|++-.. .|..+. ...+- .|..+++++.+++.-++++.|.+.+....
T Consensus 1359 FSTf~sSL~TLFqMLLGDfdYF~eDLk~l~e~nrVLGPIYFfSFILLV~FILLNMFIAII~DSFsEVK 1426 (1634)
T PLN03223 1359 FSDMTDSINSLFENLLGDITYFNEDLKNLTGLQFVVGMIYFYSYNIFVFMILFNFLLAIICDAFGEVK 1426 (1634)
T ss_pred hcCHHHHHHHHHHHHHcCchHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666555555532110 011121 12233 35566666666777888888888877553
No 127
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=97.69 E-value=9.3e-05 Score=69.82 Aligned_cols=55 Identities=35% Similarity=0.443 Sum_probs=49.2
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCC
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGS 607 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~ 607 (640)
.+.+|+++|+..|+.++.+.|++.|+.+...+.-|||+- ..||.-|+
T Consensus 78 ~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAa---------------------------------qmAAFVG~ 124 (396)
T KOG1710|consen 78 TLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAA---------------------------------QMAAFVGH 124 (396)
T ss_pred ccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHH---------------------------------HHHHHhcc
Confidence 566899999999999999999999999999999999999 88888888
Q ss_pred HHHHHHHH
Q 006573 608 ENCVLLLL 615 (640)
Q Consensus 608 ~~~~~~L~ 615 (640)
-++|...-
T Consensus 125 H~CV~iIN 132 (396)
T KOG1710|consen 125 HECVAIIN 132 (396)
T ss_pred hHHHHHHh
Confidence 88887654
No 128
>KOG3193 consensus K+ channel subunit [Inorganic ion transport and metabolism]
Probab=97.65 E-value=7.8e-05 Score=76.05 Aligned_cols=55 Identities=25% Similarity=0.430 Sum_probs=42.0
Q ss_pred HHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006573 250 RYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVV 304 (640)
Q Consensus 250 ~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~ 304 (640)
....|+|++++|++||||||.+|.-|..+++.++++-++.++..--+..++..-+
T Consensus 217 ~lf~s~y~v~vtfstvgygd~~pd~w~sql~~vi~icval~~ip~q~~~l~~tw~ 271 (1087)
T KOG3193|consen 217 DLFTSFYFVMVTFSTVGYGDWYPDYWASQLCVVILICVALGLIPKQLDELGQTWS 271 (1087)
T ss_pred eeeeeEEEEEEEEeeccccccccccchhhHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 3457899999999999999999999999888777666666665555555544433
No 129
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=97.63 E-value=2.7e-05 Score=87.31 Aligned_cols=65 Identities=18% Similarity=0.021 Sum_probs=57.3
Q ss_pred cccccccchhHHHHHHhhc---------ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 576 FFSIPISCNNVIKFLLFNL---------FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 576 ~~~~~~~~~~~~~~L~~~~---------~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
+.++..+..+.+++|+++| +.+|||+||..|+.+++++|+++|||+|.+|.+|.+|++.|....|
T Consensus 87 ~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~ 160 (664)
T PTZ00322 87 CQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGF 160 (664)
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCc
Confidence 5566778889999999875 5668999999999999999999999999999999999998876543
No 130
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.61 E-value=0.00015 Score=80.08 Aligned_cols=107 Identities=19% Similarity=0.186 Sum_probs=86.7
Q ss_pred hhhhhhhhhhHhhhhccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHH
Q 006573 509 PIMEGVLLETENMLARGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIK 588 (640)
Q Consensus 509 ~~~~~~~~~~~~rl~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~ 588 (640)
...+.+++..-+.-++.+....+++..+|..|..++++.||..|++-..++-.-.||| -.+..-+..++++
T Consensus 804 tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPl---------sla~Sggy~~iI~ 874 (2131)
T KOG4369|consen 804 TVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPL---------SLARSGGYTKIIH 874 (2131)
T ss_pred HHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCch---------hhhcCcchHHHHH
Confidence 3344444444455555555666777889999999999999999988777777778998 7788889999999
Q ss_pred HHHhhc-----------ccchhhHhhcCCCHHHHHHHHhccCCCCCC
Q 006573 589 FLLFNL-----------FYFKQHIAASKGSENCVLLLLDYEADPNSI 624 (640)
Q Consensus 589 ~L~~~~-----------~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~ 624 (640)
.|+++| +..||+.|+.+||.+.++.|++.|.|+|++
T Consensus 875 ~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaq 921 (2131)
T KOG4369|consen 875 ALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQ 921 (2131)
T ss_pred HHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccc
Confidence 999997 444899999999999999999999999984
No 131
>PRK11832 putative DNA-binding transcriptional regulator; Provisional
Probab=97.60 E-value=0.0019 Score=59.82 Aligned_cols=108 Identities=13% Similarity=0.078 Sum_probs=82.9
Q ss_pred HHHHHHhccccccccCCCeE-EEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeechhhhcCCCeeeEEEEcc
Q 006573 391 LLFQLVSEMKAEYFPPKEDV-ILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKR 469 (640)
Q Consensus 391 ~l~~l~~~~~~~~~~~ge~i-~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~ 469 (640)
..+.+.....+..+++|..+ +..++..+..+++.+|.|.+. ..+| ..+....+-.+||-...+.+....+..+|.+
T Consensus 14 L~~~L~~~g~~~~~~~~~~~i~~~~~~~~~~~ll~~G~vsir-r~d~--ll~~t~~aP~IlGl~~~~~~~~~~~~l~ae~ 90 (207)
T PRK11832 14 LDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLR-REEN--VLIGITQAPYIMGLADGLMKNDIPYKLISEG 90 (207)
T ss_pred HHHHhhccCCeEecCCCcEEeccccCCCceEEEEEeceEEEE-ecCC--eEEEeccCCeEeecccccCCCCceEEEEEcC
Confidence 34556667778889999997 555555577999999999994 3443 5677778888999887777666678999999
Q ss_pred ceEEEEeeHHHHHHHHHhchhhHHHHHHHHHHH
Q 006573 470 LSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQH 502 (640)
Q Consensus 470 ~~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~~ 502 (640)
+|+++.++.++|.++++++. +++.+..-+.-.
T Consensus 91 ~c~~~~i~~~~~~~iie~~~-LW~~~~~~l~~~ 122 (207)
T PRK11832 91 NCTGYHLPAKQTITLIEQNQ-LWRDAFYWLAWQ 122 (207)
T ss_pred ccEEEEeeHHHHHHHHHHhc-hHHHHHHHHHHH
Confidence 99999999999999998776 555444444443
No 132
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.52 E-value=6.3e-05 Score=73.50 Aligned_cols=71 Identities=25% Similarity=0.225 Sum_probs=64.1
Q ss_pred ceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCCHHHH
Q 006573 532 SLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGSENCV 611 (640)
Q Consensus 532 ~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~~~~~ 611 (640)
.++.|+..|+.+.++.|++.|.++|..|....+|| .+|+.-||+++|
T Consensus 39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL---------------------------------~lAsLcGHe~vv 85 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPL---------------------------------YLASLCGHEDVV 85 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHH---------------------------------HHHHHcCcHHHH
Confidence 46779999999999999999999999999999999 999999999999
Q ss_pred HHHHhccCCCCCCCcccceeeeee
Q 006573 612 LLLLDYEADPNSIGMLVTKYIIRF 635 (640)
Q Consensus 612 ~~L~~~ga~~~~~~~~g~~~~~~~ 635 (640)
++|+++||-.+.-.-+|..|+--|
T Consensus 86 klLLenGAiC~rdtf~G~RC~Yga 109 (516)
T KOG0511|consen 86 KLLLENGAICSRDTFDGDRCHYGA 109 (516)
T ss_pred HHHHHcCCcccccccCcchhhhhh
Confidence 999999998877777887776433
No 133
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=97.52 E-value=9e-05 Score=71.37 Aligned_cols=87 Identities=28% Similarity=0.238 Sum_probs=75.0
Q ss_pred hccCCCCCcceeeeeecCC-----HHHHHHHHhcCC---CCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc
Q 006573 523 ARGRMDLPLSLCFAALRGD-----DLLLHQLLKRGL---DPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL 594 (640)
Q Consensus 523 ~~g~~~l~~~l~~a~~~g~-----~~~v~~Ll~~g~---~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 594 (640)
......+.++++.++..++ .++++.|++.|+ +.+.+|..|.||| ++++..++.+++++|+..+
T Consensus 100 ~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl---------~~A~~~~~~~~~~~ll~~~ 170 (235)
T COG0666 100 NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPL---------HWAALNGDADIVELLLEAG 170 (235)
T ss_pred ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchh---------HHHHHcCchHHHHHHHhcC
Confidence 3444566788888999999 999999999999 6677799999999 7777777889999999885
Q ss_pred ---------ccchhhHhhcCCCHHHHHHHHhcc
Q 006573 595 ---------FYFKQHIAASKGSENCVLLLLDYE 618 (640)
Q Consensus 595 ---------~~~~~h~a~~~g~~~~~~~L~~~g 618 (640)
+.++++.|+..|+.++++.+++.|
T Consensus 171 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 171 ADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 455899999999999999999965
No 134
>PF04831 Popeye: Popeye protein conserved region; InterPro: IPR006916 The Popeye (POP) family of proteins, is restricted to vertebrates and is preferentially expressed in developing and adult striated muscle. It is represented by a conserved region which includes three potential transmembrane domains []. The strong conservation of POP genes during evolution and their preferential expression in heart and skeletal muscle suggest that these novel proteins may have an important function in these tissues in vertebrates.; GO: 0016020 membrane
Probab=97.47 E-value=0.0038 Score=53.94 Aligned_cols=112 Identities=10% Similarity=0.058 Sum_probs=90.2
Q ss_pred cCCHHHHHHHHhc-cccccccCCCeEEEeCC-CCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeechhhhc-----C
Q 006573 386 GVSNDLLFQLVSE-MKAEYFPPKEDVILQNE-APTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLC-----Y 458 (640)
Q Consensus 386 ~ls~~~l~~l~~~-~~~~~~~~ge~i~~~g~-~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~-----~ 458 (640)
+.|....++++.. .+.....+|+.-..||. +.|.+-++++|++.+.. +|+ .+..+.|-++...-+..+ +
T Consensus 14 ~Vs~~~Fk~iv~~~~~i~~L~~~~~YAvE~~T~~drLSlLLsGr~~Vs~--~g~--fLH~I~p~qFlDSPEW~s~~~s~~ 89 (153)
T PF04831_consen 14 KVSRQQFKKIVGCCCEIRTLKKGETYAVEGKTPIDRLSLLLSGRMRVSC--DGR--FLHYIYPYQFLDSPEWESLRPSED 89 (153)
T ss_pred CCCHHHHHHHHhhhceEEEecCCceeeecCCcccceEeEEEcCcEEEEE--CCE--eeEeecccccccChhhhccccCCC
Confidence 4678888888777 67789999999999887 45889999999999986 453 788888888887655443 3
Q ss_pred CCeeeEEEEccceEEEEeeHHHHHHHHHhchhhHHHHHHHHHH
Q 006573 459 RPQLFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLQ 501 (640)
Q Consensus 459 ~~~~~~~~a~~~~~v~~i~~~~f~~ll~~~~~~~~~~~~~l~~ 501 (640)
.....|+.|.++|.++.-+|+.+..++..+|-+...+-..+.+
T Consensus 90 ~~FQVTitA~~~Cryl~W~R~kL~~~l~~~~~L~~vF~~liGk 132 (153)
T PF04831_consen 90 DKFQVTITAEEDCRYLCWPREKLYLLLAKDPFLAAVFSNLIGK 132 (153)
T ss_pred CeEEEEEEEcCCcEEEEEEHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999877665444443
No 135
>KOG3542 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=97.42 E-value=0.00052 Score=71.92 Aligned_cols=116 Identities=14% Similarity=0.147 Sum_probs=88.4
Q ss_pred HHHhhhHHhhhhccccccCCHHHHHHHHhccccccc-cCCCeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCC
Q 006573 369 ISHYLFYSLMDKVYLFRGVSNDLLFQLVSEMKAEYF-PPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTG 447 (640)
Q Consensus 369 i~~~~~~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~-~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G 447 (640)
-..+...+++.+.|.|.+++-+..+++|..|....+ ..|.+|...|+.-|.+++|+.|.|++... +|+ ...+.-|
T Consensus 274 dDieqLLeFMhqlpAFAnmtMSvrReLC~vMvFaVVe~AGtivL~dgeeLDSWsVIlNG~VEv~~P-dGk---~e~l~mG 349 (1283)
T KOG3542|consen 274 DDIEQLLEFMHQLPAFANMTMSVRRELCLVMVFAVVEDAGTIVLADGEELDSWSVILNGCVEVVKP-DGK---REELKMG 349 (1283)
T ss_pred HHHHHHHHHHHhchHhhcccHHHHHHHHHHHHHHHHhhcCeEEecCCcccceeEEEecceEEEecC-CCc---eEEeecc
Confidence 334556678899999999999999999999886554 57999999999999999999999999875 453 3467789
Q ss_pred CeeechhhhcCCCeeeEEE-EccceEEEEeeHHHHHHHHHhc
Q 006573 448 EICGEIGVLCYRPQLFTVR-TKRLSQLLRLNRTTFLNIVQAN 488 (640)
Q Consensus 448 ~~fGe~~l~~~~~~~~~~~-a~~~~~v~~i~~~~f~~ll~~~ 488 (640)
+.||...-...+-..-.++ -+.+|++.+|..++|-+++..-
T Consensus 350 nSFG~~PT~dkqym~G~mRTkVDDCqFVciaqqDycrIln~v 391 (1283)
T KOG3542|consen 350 NSFGAEPTPDKQYMIGEMRTKVDDCQFVCIAQQDYCRILNTV 391 (1283)
T ss_pred cccCCCCCcchhhhhhhhheecccceEEEeehhhHHHHHHHH
Confidence 9999653222211111222 3589999999999998887543
No 136
>KOG3827 consensus Inward rectifier K+ channel [Inorganic ion transport and metabolism]
Probab=97.33 E-value=0.0016 Score=64.72 Aligned_cols=100 Identities=14% Similarity=0.203 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CccccccccCCCccCcchHHHHHHHHHhhhhhhcccccCCc--ccC
Q 006573 201 CCKLIFVTLFAVHCAGCFYYLLAARYHNP-----ERTWIGASLGQNFLEKSLWIRYVTSMYWSITTLTTVGYGDL--HPV 273 (640)
Q Consensus 201 l~~l~~~~~~~~h~~ac~~~~~~~~~~~~-----~~~W~~~~~~~~~~~~~~~~~y~~s~yw~~~t~ttvGygd~--~p~ 273 (640)
++.+.+.+++...+||++||.++...++- ..+|.. .-....++..||.|++-|=||+|||-- +..
T Consensus 66 lliF~~sf~~SWl~Fg~iwwlIA~~hGDL~~~~~~~~~tp--------CV~nV~sf~sAFLFSiETQtTIGYG~R~vTee 137 (400)
T KOG3827|consen 66 LLIFSLSFVLSWLFFGVIWWLIAYAHGDLEPDPPGENHTP--------CVMNVHSFTSAFLFSIETQTTIGYGFRYVTEE 137 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccCCCCcCCCc--------ceeeccchhhhheeeeeeeeeeeccccccCcc
Confidence 33444455556677899999999643321 122221 123446889999999999999999965 445
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q 006573 274 NTREMVFDILFMLFNLGLTAYLIGNMTNLVVHGTS 308 (640)
Q Consensus 274 t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~ 308 (640)
-+...+..++-+++|+++-|+++|.+.+-+.+-.+
T Consensus 138 CP~aI~ll~~Q~I~g~ii~afm~G~i~aKiarPkK 172 (400)
T KOG3827|consen 138 CPEAIFLLVLQSILGVIINAFMVGAIFAKIARPKK 172 (400)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence 56788888899999999999999999877665433
No 137
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.28 E-value=0.00011 Score=75.18 Aligned_cols=74 Identities=26% Similarity=0.238 Sum_probs=66.7
Q ss_pred CcceeeeeecCCHHHHHHHHhcCCC--CCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCC
Q 006573 530 PLSLCFAALRGDDLLLHQLLKRGLD--PNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGS 607 (640)
Q Consensus 530 ~~~l~~a~~~g~~~~v~~Ll~~g~~--~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~ 607 (640)
..-+|+|+..|+.++++.++++|.. .|..|.+|.|+| |.|+..++
T Consensus 900 ~sllh~a~~tg~~eivkyildh~p~elld~~de~get~l---------------------------------hkaa~~~~ 946 (1004)
T KOG0782|consen 900 CSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETAL---------------------------------HKAACQRN 946 (1004)
T ss_pred hhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHH---------------------------------HHHHHhcc
Confidence 3457899999999999999999874 678889999999 99999999
Q ss_pred HHHHHHHHhccCCCCCCCcccceeeeeec
Q 006573 608 ENCVLLLLDYEADPNSIGMLVTKYIIRFF 636 (640)
Q Consensus 608 ~~~~~~L~~~ga~~~~~~~~g~~~~~~~~ 636 (640)
..++.+|++.||.+..+|..|.||--||-
T Consensus 947 r~vc~~lvdagasl~ktd~kg~tp~eraq 975 (1004)
T KOG0782|consen 947 RAVCQLLVDAGASLRKTDSKGKTPQERAQ 975 (1004)
T ss_pred hHHHHHHHhcchhheecccCCCChHHHHH
Confidence 99999999999999999999999976653
No 138
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.22 E-value=0.00022 Score=73.18 Aligned_cols=75 Identities=27% Similarity=0.226 Sum_probs=61.1
Q ss_pred CcceeeeeecCCHHHHHHHHhc--CCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCC
Q 006573 530 PLSLCFAALRGDDLLLHQLLKR--GLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGS 607 (640)
Q Consensus 530 ~~~l~~a~~~g~~~~v~~Ll~~--g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~ 607 (640)
+.++|+++.....+.....+.. +..++.+|..|+||| |+|+..|+
T Consensus 21 p~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpL---------------------------------hlAV~Lg~ 67 (560)
T KOG0522|consen 21 PKPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPL---------------------------------HLAVRLGH 67 (560)
T ss_pred CcccchhhhccchhhHHHHHhhhhhceeccccCCCCccH---------------------------------HHHHHhcC
Confidence 3457778877777666654433 446889999999999 99999999
Q ss_pred HHHHHHHHhccCCCCCCCcccceeeeeecc
Q 006573 608 ENCVLLLLDYEADPNSIGMLVTKYIIRFFG 637 (640)
Q Consensus 608 ~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~ 637 (640)
.+++++|+.+|||+..+|+.|..||+.|..
T Consensus 68 ~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~ 97 (560)
T KOG0522|consen 68 VEAARILLSAGADVSIKNNEGWSPLHEAVS 97 (560)
T ss_pred HHHHHHHHhcCCCccccccccccHHHHHHH
Confidence 999999999999999999999999887654
No 139
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.19 E-value=0.00022 Score=77.04 Aligned_cols=79 Identities=25% Similarity=0.298 Sum_probs=57.8
Q ss_pred CcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcc-----------cch
Q 006573 530 PLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLF-----------YFK 598 (640)
Q Consensus 530 ~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-----------~~~ 598 (640)
..|+-+||-.++.++++.|+++|+|||.+|..|+|.| |.-+.....++-+.++++++ .+|
T Consensus 241 EyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVL---------H~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTP 311 (782)
T KOG3676|consen 241 EYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVL---------HMLVIHFVTEMYDLALELGANALEHVRNNQGLTP 311 (782)
T ss_pred cCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHH---------HHHHHHHHHHHHHHHHhcCCCccccccccCCCCh
Confidence 4567779999999999999999999999999999999 33333333444455555543 356
Q ss_pred hhHhhcCCCHHHHHHHHhc
Q 006573 599 QHIAASKGSENCVLLLLDY 617 (640)
Q Consensus 599 ~h~a~~~g~~~~~~~L~~~ 617 (640)
|-+||+-|+.++-+.+++.
T Consensus 312 LtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 312 LTLAAKLGKKEMFQHILER 330 (782)
T ss_pred HHHHHHhhhHHHHHHHHHh
Confidence 7777777777777666665
No 140
>KOG4404 consensus Tandem pore domain K+ channel TASK3/THIK-1 [Inorganic ion transport and metabolism]
Probab=97.15 E-value=0.00013 Score=70.34 Aligned_cols=51 Identities=24% Similarity=0.559 Sum_probs=44.6
Q ss_pred HHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 006573 250 RYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMT 300 (640)
Q Consensus 250 ~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~ 300 (640)
++.-||||+.+.+||+|||-.+|.|..||+|+++..++|+-+--..+..++
T Consensus 80 kF~GaFYFa~TVItTIGyGhstP~T~~GK~Fcm~Yal~Gipl~lvmFqs~g 130 (350)
T KOG4404|consen 80 KFAGAFYFATTVITTIGYGHSTPSTDGGKAFCMFYALVGIPLTLVMFQSIG 130 (350)
T ss_pred ccCcceEEEEEEEeeeccCCCCCCCcCceehhhhHHHhcCchHHHHHHHHH
Confidence 577899999999999999999999999999999999999876655555444
No 141
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.02 E-value=0.00032 Score=78.45 Aligned_cols=76 Identities=32% Similarity=0.281 Sum_probs=70.6
Q ss_pred CCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCCH
Q 006573 529 LPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGSE 608 (640)
Q Consensus 529 l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~~ 608 (640)
...++|.++..|.....+.|+..|+++|..|..|++|| |.+...|+.
T Consensus 656 ~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~pl---------------------------------h~~~~~g~~ 702 (785)
T KOG0521|consen 656 GCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPL---------------------------------HHATASGHT 702 (785)
T ss_pred ccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcc---------------------------------hhhhhhccc
Confidence 35667889999999999999999999999999999999 999999999
Q ss_pred HHHHHHHhccCCCCCCCcccceeeeeecc
Q 006573 609 NCVLLLLDYEADPNSIGMLVTKYIIRFFG 637 (640)
Q Consensus 609 ~~~~~L~~~ga~~~~~~~~g~~~~~~~~~ 637 (640)
..+.+|+++||++++-|..|.+|+-.|+.
T Consensus 703 ~~~~~ll~~~a~~~a~~~~~~~~l~~a~~ 731 (785)
T KOG0521|consen 703 SIACLLLKRGADPNAFDPDGKLPLDIAME 731 (785)
T ss_pred chhhhhccccccccccCccCcchhhHHhh
Confidence 99999999999999999999999987754
No 142
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.00 E-value=0.00034 Score=72.24 Aligned_cols=79 Identities=25% Similarity=0.259 Sum_probs=44.0
Q ss_pred eeeeeecCCHHHHHHHHhcCCC--CC--CCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------ccchh
Q 006573 533 LCFAALRGDDLLLHQLLKRGLD--PN--ESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------FYFKQ 599 (640)
Q Consensus 533 l~~a~~~g~~~~v~~Ll~~g~~--~n--~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~~~~ 599 (640)
+.-|+...+...+-.||.+|.. +| ..+.+|+||| |.++.++++.+..+|+=+| +.++|
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~L---------HLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l 698 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTAL---------HLAARKGNVVLAQLLIWYGVDVMARDAHGRTAL 698 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchh---------hhhhhhcchhHHHHHHHhCccceecccCCchhh
Confidence 5556777777788889999863 33 3466789999 4444444444444444332 22234
Q ss_pred hHhhcCCCHHHHHHHHhccCC
Q 006573 600 HIAASKGSENCVLLLLDYEAD 620 (640)
Q Consensus 600 h~a~~~g~~~~~~~L~~~ga~ 620 (640)
.+|-+.|..||...|+.+|+.
T Consensus 699 ~yar~a~sqec~d~llq~gcp 719 (749)
T KOG0705|consen 699 FYARQAGSQECIDVLLQYGCP 719 (749)
T ss_pred hhHhhcccHHHHHHHHHcCCC
Confidence 444444444444444444443
No 143
>KOG2301 consensus Voltage-gated Ca2+ channels, alpha1 subunits [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.76 E-value=0.002 Score=76.88 Aligned_cols=71 Identities=23% Similarity=0.338 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHhhhheecccCC-CCCeeehhhHhhHHHhhhheeeeeEEEEeCCceEEEeChhHHHHHHhhh-hhh
Q 006573 67 WETYLVLLVIYTAWASPFEFGFLRKP-QRPLSVIDNVVNGFFAVDIILTFFVAYLDKATYLLVDCPKQIAWKYASS-WLV 144 (640)
Q Consensus 67 w~~~~~~~~~~~~~~~p~~~~f~~~~-~~~~~~i~~~~~~~f~~d~~l~f~t~~~~~~~~~~v~~~~~i~~~Yl~~-~f~ 144 (640)
|+.++.++++++.+..-.+..-.+.. ...+..+..++.++|++|.+++...- -.+.|++. |+.
T Consensus 1159 F~~~i~~li~ln~i~l~~~~~~qs~~~~~~l~~in~vft~~Ft~E~vLKiiA~---------------~~~~yf~~~WN~ 1223 (1592)
T KOG2301|consen 1159 FDYLIMLLIFLNTIIMMVETYDQSDTYTAILTILNAVFIVLFTIECILKVIAL---------------RFRGYFTSAWNV 1223 (1592)
T ss_pred HHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------hhhHhccccchh
Confidence 78888888888877665544221111 12456688899999999999986321 11677765 889
Q ss_pred hHhHhhcc
Q 006573 145 FDVISTIP 152 (640)
Q Consensus 145 ~Dlis~lP 152 (640)
+|++.++-
T Consensus 1224 FDfvvvIl 1231 (1592)
T KOG2301|consen 1224 FDFVVTIL 1231 (1592)
T ss_pred eEeeeeeH
Confidence 99887664
No 144
>KOG2301 consensus Voltage-gated Ca2+ channels, alpha1 subunits [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.75 E-value=0.007 Score=72.44 Aligned_cols=141 Identities=17% Similarity=0.238 Sum_probs=84.8
Q ss_pred eeehhhHhhHHHhhhheeeeeEEEEeCCceEEEeChhHHHHHHh-hhhhhhHhHhhccHHHHhhhCCCCccchhhhhHHH
Q 006573 96 LSVIDNVVNGFFAVDIILTFFVAYLDKATYLLVDCPKQIAWKYA-SSWLVFDVISTIPSELAQKISPKPLQSYGLFNMLR 174 (640)
Q Consensus 96 ~~~i~~~~~~~f~~d~~l~f~t~~~~~~~~~~v~~~~~i~~~Yl-~~~f~~Dlis~lP~~~~~~~~~~~~~~~~~l~~lr 174 (640)
+.+.+.+...+|.+|+.+.... .+| +.|+ ++|+++|.+-+. +.++... ..+...+.++|.+|
T Consensus 475 l~~~~~vF~~lF~~Em~~ki~a-----------l~~----~~yF~~~~n~fD~~iv~-l~~~~~~-~~~~~g~svLr~fr 537 (1592)
T KOG2301|consen 475 LYLGNVVFTGLFTVEMILKIYA-----------LGP----RNYFRRGWNIFDLIIVL-LSLLELL-LKNVYGLSVLRSFR 537 (1592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----------cCc----HHHHhhhcchheEEEEe-hhhHHhc-ccchHHHHHHHHHH
Confidence 4456677888999999988732 345 5666 558899999888 5554433 44445677888888
Q ss_pred HHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCccccccccCCCccCcchHHHHH
Q 006573 175 LWRLRRVSALFSRLEKDRNY-NYFWVRCCKLIFVTLFAVHCAGC-FYYLLAARYHNPERTWIGASLGQNFLEKSLWIRYV 252 (640)
Q Consensus 175 llrl~r~~~~~~~l~~~~~~-~~~~~~l~~l~~~~~~~~h~~ac-~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~y~ 252 (640)
++|++|+.+.+..++..... ......+..|++++++++-++|. .+-+++..++.. .. ....+..++
T Consensus 538 llRIfkl~k~wp~l~~lv~~i~ns~~~l~~L~l~l~i~i~Ifa~~gmqlFg~~~n~~-~~-----------~~~~~~~fp 605 (1592)
T KOG2301|consen 538 LLRIFKLIKSWPTLNDLVKSIFNSGKALGNLVLFLFIFIFIFAAIGMQLFGGVYNLH-CD-----------IHWHFTDFP 605 (1592)
T ss_pred HHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhhHHhhCcccCCC-CC-----------CccchhhCH
Confidence 88888888777655543221 11224555555555555554443 333333222221 11 113556778
Q ss_pred HHHHhhhhhhcccc
Q 006573 253 TSMYWSITTLTTVG 266 (640)
Q Consensus 253 ~s~yw~~~t~ttvG 266 (640)
.||-+... +|+-+
T Consensus 606 ~sfl~vFq-lt~e~ 618 (1592)
T KOG2301|consen 606 HSFLSVFQ-ITCEE 618 (1592)
T ss_pred HHHHHHHH-HcCCc
Confidence 88888887 55533
No 145
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=96.70 E-value=0.00033 Score=75.29 Aligned_cols=53 Identities=28% Similarity=0.224 Sum_probs=50.2
Q ss_pred CCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCCHHHHHHHHhccCCCCCCCc-ccceeee
Q 006573 555 PNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGSENCVLLLLDYEADPNSIGM-LVTKYII 633 (640)
Q Consensus 555 ~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~-~g~~~~~ 633 (640)
.|.+|..|||+| |+|++.|..++++.|++||+|++.+|. -|.+||+
T Consensus 45 anikD~~GR~al---------------------------------H~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLH 91 (1267)
T KOG0783|consen 45 ANIKDRYGRTAL---------------------------------HIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALH 91 (1267)
T ss_pred hhHHHhhcccee---------------------------------eeeeccchhHHHHHHHhcCceeeeccccccchHhh
Confidence 678999999999 999999999999999999999999997 8999999
Q ss_pred eeccccC
Q 006573 634 RFFGFVH 640 (640)
Q Consensus 634 ~~~~~~~ 640 (640)
||.-++|
T Consensus 92 RaiyyG~ 98 (1267)
T KOG0783|consen 92 RAIYYGN 98 (1267)
T ss_pred Hhhhhch
Confidence 9998876
No 146
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=96.59 E-value=0.0011 Score=41.96 Aligned_cols=32 Identities=41% Similarity=0.488 Sum_probs=29.2
Q ss_pred CCcceeeeeecCCHHHHHHHHhcCCCCCCCCC
Q 006573 529 LPLSLCFAALRGDDLLLHQLLKRGLDPNESDN 560 (640)
Q Consensus 529 l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~ 560 (640)
+.+|+|+|+..|+.++++.|+++|+++|.+|+
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 45789999999999999999999999999874
No 147
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=96.37 E-value=0.0037 Score=64.80 Aligned_cols=61 Identities=33% Similarity=0.412 Sum_probs=55.8
Q ss_pred cCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc
Q 006573 525 GRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL 594 (640)
Q Consensus 525 g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 594 (640)
|+-.+++++|.|+..|++.+.+.|+=.|+|+-.+|..|+|+| ..|...+..+++..|+.+|
T Consensus 657 ~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l---------~yar~a~sqec~d~llq~g 717 (749)
T KOG0705|consen 657 GEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTAL---------FYARQAGSQECIDVLLQYG 717 (749)
T ss_pred cCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhh---------hhHhhcccHHHHHHHHHcC
Confidence 444668889999999999999999999999999999999999 8888889999999999985
No 148
>PF13606 Ank_3: Ankyrin repeat
Probab=96.32 E-value=0.0019 Score=39.82 Aligned_cols=29 Identities=31% Similarity=0.336 Sum_probs=26.0
Q ss_pred CCcceeeeeecCCHHHHHHHHhcCCCCCC
Q 006573 529 LPLSLCFAALRGDDLLLHQLLKRGLDPNE 557 (640)
Q Consensus 529 l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~ 557 (640)
+.++++.|+..|+.++++.|+++|+|+|.
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 35678899999999999999999999984
No 149
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.29 E-value=0.0047 Score=63.78 Aligned_cols=67 Identities=25% Similarity=0.244 Sum_probs=56.0
Q ss_pred hHhhhhccCCCCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhcccc
Q 006573 518 TENMLARGRMDLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYF 597 (640)
Q Consensus 518 ~~~rl~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 597 (640)
....+...+..+.+|+|.|+..|+...++.|+.+|+++-.+|..|++||
T Consensus 44 ~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L------------------------------- 92 (560)
T KOG0522|consen 44 VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPL------------------------------- 92 (560)
T ss_pred hhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHH-------------------------------
Confidence 3334556667778999999999999999999999999999999999999
Q ss_pred hhhHhhcCCCHHHHHHHHhc
Q 006573 598 KQHIAASKGSENCVLLLLDY 617 (640)
Q Consensus 598 ~~h~a~~~g~~~~~~~L~~~ 617 (640)
|.|+..|+.+++..++.|
T Consensus 93 --~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 93 --HEAVSTGNEQIITEVLRH 110 (560)
T ss_pred --HHHHHcCCHHHHHHHHHH
Confidence 888888888766655543
No 150
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=96.07 E-value=0.006 Score=61.89 Aligned_cols=44 Identities=32% Similarity=0.380 Sum_probs=38.7
Q ss_pred hccCCCCCcceeeeeecCCHHHHHHHHhc-CCCCCCCCCCCCccc
Q 006573 523 ARGRMDLPLSLCFAALRGDDLLLHQLLKR-GLDPNESDNNGRTAL 566 (640)
Q Consensus 523 ~~g~~~l~~~l~~a~~~g~~~~v~~Ll~~-g~~~n~~d~~g~t~L 566 (640)
...+.+.++.+|.|+.+|+.++++.|+.. +.|++.+|..|+|||
T Consensus 533 ~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPl 577 (622)
T KOG0506|consen 533 ETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPL 577 (622)
T ss_pred cccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcc
Confidence 34456677889999999999999999975 789999999999999
No 151
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.94 E-value=0.0093 Score=35.59 Aligned_cols=25 Identities=48% Similarity=0.553 Sum_probs=22.6
Q ss_pred hhhHhhcCCCHHHHHHHHhccCCCC
Q 006573 598 KQHIAASKGSENCVLLLLDYEADPN 622 (640)
Q Consensus 598 ~~h~a~~~g~~~~~~~L~~~ga~~~ 622 (640)
++|+|+..|+.++++.|+++|++++
T Consensus 5 ~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 5 PLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 3399999999999999999999876
No 152
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.70 E-value=0.012 Score=60.33 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=33.0
Q ss_pred hhHhhcCCCHHHHHHHHhccCCCCCCCcccceeee
Q 006573 599 QHIAASKGSENCVLLLLDYEADPNSIGMLVTKYII 633 (640)
Q Consensus 599 ~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~ 633 (640)
||+|+.+|..++|..|++.|+|+.++|..|+||-.
T Consensus 434 LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ 468 (591)
T KOG2505|consen 434 LHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYS 468 (591)
T ss_pred HHHHHhcchHHHHHHHHHhcCCchhcccCCCCccc
Confidence 39999999999999999999999999999999953
No 153
>KOG3614 consensus Ca2+/Mg2+-permeable cation channels (LTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.65 E-value=0.79 Score=53.37 Aligned_cols=90 Identities=11% Similarity=0.166 Sum_probs=56.3
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhhhheecccCCCCCeeehhhHhhHHHhhhheeeeeEEEEeCCceEEEeChhHHHHHH
Q 006573 59 PYDRRYRVWETYLVLLVIYTAWASPFEFGFLRKPQRPLSVIDNVVNGFFAVDIILTFFVAYLDKATYLLVDCPKQIAWKY 138 (640)
Q Consensus 59 P~s~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~~~~~~~~i~~~~~~~f~~d~~l~f~t~~~~~~~~~~v~~~~~i~~~Y 138 (640)
-.++...+|-.++..+.++.++.+.+.+-|...+. ++-++-++-.+-+++|-+=+...+ +.+ .=+++++.-|
T Consensus 788 ysAPIvkFw~~~l~yi~FL~lftYvlLv~~~~~Ps-~~Ew~~~~~iftl~~E~vRq~~~s---e~~----~l~~kv~v~f 859 (1381)
T KOG3614|consen 788 YSAPIVKFWLNVLSYIAFLLLFTYVLLVDFQPSPS-MWEWILFAWIFTLFLEEVRQIFIS---ESG----LLPQKVRVYF 859 (1381)
T ss_pred HcCchHHHHHHHHHHHHHHHHHHHHheeccCCCCC-ccchhHHHHHHHHHHHHHHHHhcC---CCc----chhhHHHHHH
Confidence 34566677888888888888888888887877663 333333333334455555444332 322 1155655555
Q ss_pred hhhhhhhHhHhhccHHHH
Q 006573 139 ASSWLVFDVISTIPSELA 156 (640)
Q Consensus 139 l~~~f~~Dlis~lP~~~~ 156 (640)
...|+.+|+++++-|.+-
T Consensus 860 ~d~wN~~d~~ai~~F~vG 877 (1381)
T KOG3614|consen 860 ADFWNLIDLLAILLFLVG 877 (1381)
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 577999999999876553
No 154
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=95.53 E-value=0.029 Score=57.40 Aligned_cols=39 Identities=31% Similarity=0.313 Sum_probs=37.0
Q ss_pred CCCcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCccc
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTAL 566 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L 566 (640)
.+.+|+|.|++.|+...++.|+-.|+|++..|.+|.||+
T Consensus 166 kg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~ 204 (669)
T KOG0818|consen 166 KGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPV 204 (669)
T ss_pred cCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHH
Confidence 567889999999999999999999999999999999999
No 155
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.53 E-value=0.014 Score=63.92 Aligned_cols=89 Identities=24% Similarity=0.185 Sum_probs=67.5
Q ss_pred eeeecCCHHHHHHHHhcC----CCCCCCCCCCCcccccccc-cCcc----------------cccccccchhHHHHHHhh
Q 006573 535 FAALRGDDLLLHQLLKRG----LDPNESDNNGRTALVCLTH-FNSE----------------FFSIPISCNNVIKFLLFN 593 (640)
Q Consensus 535 ~a~~~g~~~~v~~Ll~~g----~~~n~~d~~g~t~L~~~~~-~~~~----------------~~~~~~~~~~~~~~L~~~ 593 (640)
.++..|+.-.++..+... .++|..|.-|+++|+-|.- +|.+ ..++..+.++.|++++.+
T Consensus 31 ~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~gdALL~aI~~~~v~~VE~ll~~ 110 (822)
T KOG3609|consen 31 LAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEEGDALLLAIAVGSVPLVELLLVH 110 (822)
T ss_pred HHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHhc
Confidence 378889998888887653 3689999999999964443 2211 135555667888888876
Q ss_pred c-------------------ccchhhHhhcCCCHHHHHHHHhccCCCCC
Q 006573 594 L-------------------FYFKQHIAASKGSENCVLLLLDYEADPNS 623 (640)
Q Consensus 594 ~-------------------~~~~~h~a~~~g~~~~~~~L~~~ga~~~~ 623 (640)
. +.+|+..||..+|.|++++|++.|+++..
T Consensus 111 ~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 111 FVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred ccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 2 45589999999999999999999998654
No 156
>KOG3542 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=95.51 E-value=0.018 Score=60.92 Aligned_cols=105 Identities=15% Similarity=0.174 Sum_probs=82.5
Q ss_pred hHHHHhHHHHhhhHHhhhhccccccCCHHHHHHHHhccccccccCCCeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEE
Q 006573 362 PKAIRSSISHYLFYSLMDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVV 441 (640)
Q Consensus 362 p~~lr~~i~~~~~~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~ 441 (640)
|+.++.-....-....+.+...|+++-...++.++...+.+.++.+.++|+.|+.+.++|++++|.|-+. |+
T Consensus 23 ~~~~~t~~~~rN~~~~lh~ld~~snl~~~~lk~l~~~aryer~~g~~ilf~~~~var~wyillsgsv~v~----gq---- 94 (1283)
T KOG3542|consen 23 PPHLRTPDDIRNVYEQLHQLDTFSNLFIGPLKALCKTARYERHPGQYILFRDGDVARSWYILLSGSVFVE----GQ---- 94 (1283)
T ss_pred CcccCChhhhhhHHHHHhhhhhhhhhhhhhHHHhhhhhhhhcCCCceEEecccchhhheeeeeccceEee----cc----
Confidence 3444443333333456777888999999999999999999999999999999999999999999998663 32
Q ss_pred EEecCCCeeechhhhcCCCeeeEEEEccceEEEEeeH
Q 006573 442 GEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLLRLNR 478 (640)
Q Consensus 442 ~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~~i~~ 478 (640)
.+.|-.+||-. .|..|..++-.+++++..+++.
T Consensus 95 -i~mp~~~fgkr---~g~~r~~nclllq~semivid~ 127 (1283)
T KOG3542|consen 95 -IYMPYGCFGKR---TGQNRTHNCLLLQESEMIVIDY 127 (1283)
T ss_pred -eecCccccccc---cccccccceeeecccceeeeec
Confidence 55677778765 4677888888899999888853
No 157
>KOG1418 consensus Tandem pore domain K+ channel [Inorganic ion transport and metabolism]
Probab=95.34 E-value=0.0066 Score=64.92 Aligned_cols=48 Identities=27% Similarity=0.571 Sum_probs=41.2
Q ss_pred HHHHHHHHhhhhhhcccccCCcccCCchhh--------HHHHHHHHHHHHHHHHHH
Q 006573 249 IRYVTSMYWSITTLTTVGYGDLHPVNTREM--------VFDILFMLFNLGLTAYLI 296 (640)
Q Consensus 249 ~~y~~s~yw~~~t~ttvGygd~~p~t~~e~--------~~~i~~~i~g~~~~a~~i 296 (640)
-.|..|+|++++++||+||||+.|.+..++ ....+..++|....+...
T Consensus 241 w~f~~~~Yf~fisltTIG~GD~vp~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 296 (433)
T KOG1418|consen 241 WSFIEAFYFSFISLTTIGFGDIVPRTLLGRFRREELVDPLASVWILSGLALLALVL 296 (433)
T ss_pred eeeEeeeeEEEEEeeeecCCccccCCCcceeeccccccchhHHHHHhhhhHHHHHh
Confidence 368899999999999999999999998866 577788888887777766
No 158
>KOG2302 consensus T-type voltage-gated Ca2+ channel, pore-forming alpha1I subunit [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.10 E-value=0.59 Score=52.25 Aligned_cols=70 Identities=9% Similarity=0.262 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHhhhheecccC--CCCCeeehhhHhhHHHhhhheeeeeEEEEeCCceEEEeChhHHHHHHhhh-h
Q 006573 66 VWETYLVLLVIYTAWASPFEFGFLRK--PQRPLSVIDNVVNGFFAVDIILTFFVAYLDKATYLLVDCPKQIAWKYASS-W 142 (640)
Q Consensus 66 ~w~~~~~~~~~~~~~~~p~~~~f~~~--~~~~~~~i~~~~~~~f~~d~~l~f~t~~~~~~~~~~v~~~~~i~~~Yl~~-~ 142 (640)
+-+.++++++.++.+....+- +... ....+-+.++.+.++|++|.++++... -.++|++. |
T Consensus 1442 yld~fit~ii~LnvVtms~eh-yqqp~sldealkycny~ft~vfV~EaV~klvaf---------------G~rrFfkdrw 1505 (1956)
T KOG2302|consen 1442 YLDQFITFIICLNVVTMSEEH-YQQPTSLDEALKYCNYRFTAVFVLEAVLKLVAF---------------GERRFFKDRW 1505 (1956)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhCcccHHHHhhhcceeeeehhHHHHHHHHHHH---------------hHHHHHhhhh
Confidence 456667777777776655443 2111 123455667778889999999887432 12677765 7
Q ss_pred hhhHhHhhc
Q 006573 143 LVFDVISTI 151 (640)
Q Consensus 143 f~~Dlis~l 151 (640)
.-+|+.-++
T Consensus 1506 nqldlaivl 1514 (1956)
T KOG2302|consen 1506 NQLDLAIVL 1514 (1956)
T ss_pred hhhhHHHHH
Confidence 788875443
No 159
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=92.89 E-value=0.14 Score=46.13 Aligned_cols=57 Identities=25% Similarity=0.332 Sum_probs=32.7
Q ss_pred CCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc-ccc---------hhhHhhcCCCHHHHHHHHhc
Q 006573 552 GLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL-FYF---------KQHIAASKGSENCVLLLLDY 617 (640)
Q Consensus 552 g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~---------~~h~a~~~g~~~~~~~L~~~ 617 (640)
+.++|.+|..|+||||| ++..++.+.+..|+..| +++ .+.+|-+.|..+.|..|.++
T Consensus 2 e~~in~rD~fgWTalmc---------aa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMC---------AAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCCccchhhhcchHHHH---------HhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 45899999999999922 22223344555555544 111 35555555555555555554
No 160
>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys. Cyst development is associated with impairment of kidney function, and ultimately kidney failure and death []. Most cases of autosomal dominant PKD result from mutations in the PKD1 gene that cause premature protein termination. A second gene for autosomal dominant polycystic kidney disease has been identified by positional cloning []. The predicted 968-amino acid sequence of the PKD2 gene product (polycystin-2) contains 6 transmembrane domains, with intracellular N- and C-termini. Polycystin-2 shares some similarity with the family of voltage-activated calcium (and sodium) channels, and contains a potential calcium-binding domain. Polycystin-2 is strongly expressed in ovary, foetal and adult kidney, testis, and small intestine. Polycystin-1 requires the presence of this protein for stable expression and is believed to interact with it via its C terminus. All mutations between exons 1 and 11 result in a truncated polycystin-2 that lacks a calcium-binding EF-hand domain and the cytoplasmic domains required for the interaction of polycystin-2 with polycystin-1 []. PKD2, although clinically milder than PKD1, has a deleterious impact on life expectancy. This entry contains proteins belonging to the polycystin family including Mucolipin and Polycystin-1 and -2 (PKD1 and PKD2). The domain contains the cation channel region of PKD1 and PKD2 proteins. PKD1 and PKD2 may function through a common signalling pathway that is necessary for normal tubulogenesis. The PKD2 gene product has six transmembrane spans with intracellular amino- and carboxyl-termini []. Mucolipin is a cationic channel which probably plays a role in the endocytic pathway and in the control of membrane trafficking of proteins and lipids. It could play a major role in the calcium ion transport regulating lysosomal exocytosis [, , ].
Probab=92.36 E-value=1.4 Score=47.05 Aligned_cols=53 Identities=21% Similarity=0.165 Sum_probs=28.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006573 169 LFNMLRLWRLRRVSALFSRLEKDRNYNYFWVRCCKLIFVTLFAVHCAGCFYYLLA 223 (640)
Q Consensus 169 ~l~~lrllrl~r~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~h~~ac~~~~~~ 223 (640)
++-.+|++|++|..+-+..+..++.... ..+...+++++++.--+|.+.+.+-
T Consensus 305 fl~~lrll~~l~f~~~~~~~~~tl~~a~--~~l~~f~~~~~i~~~~fa~~g~l~f 357 (425)
T PF08016_consen 305 FLLWLRLLKLLRFNRRLSLLSRTLRRAA--KDLLGFFVIFLIIFLAFAQAGYLLF 357 (425)
T ss_pred HHHHHHHhhheeecchHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445566666666666655555554433 3555555555555555555555443
No 161
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins. The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....
Probab=92.06 E-value=1.7 Score=40.29 Aligned_cols=24 Identities=21% Similarity=0.420 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 006573 200 RCCKLIFVTLFAVHCAGCFYYLLA 223 (640)
Q Consensus 200 ~l~~l~~~~~~~~h~~ac~~~~~~ 223 (640)
++..++..+++...+.++..+.-.
T Consensus 99 ~~~~~~~~~~~~~a~~~~~lf~~~ 122 (200)
T PF00520_consen 99 KFILLLFIVLLFFACIGYQLFGGS 122 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccccccccccccccchhheecccc
Confidence 444444444444444444444443
No 162
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=91.57 E-value=0.05 Score=56.49 Aligned_cols=39 Identities=18% Similarity=0.101 Sum_probs=35.4
Q ss_pred hhHhhcCCCHHHHHHHHhccCC--CCCCCcccceeeeeecc
Q 006573 599 QHIAASKGSENCVLLLLDYEAD--PNSIGMLVTKYIIRFFG 637 (640)
Q Consensus 599 ~h~a~~~g~~~~~~~L~~~ga~--~~~~~~~g~~~~~~~~~ 637 (640)
||+|++.|+.|+|+++++||-. +|+.|..|.|+|++|..
T Consensus 903 lh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~ 943 (1004)
T KOG0782|consen 903 LHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAAC 943 (1004)
T ss_pred HHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHH
Confidence 5999999999999999999974 78899999999998864
No 163
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=91.36 E-value=0.11 Score=58.67 Aligned_cols=94 Identities=20% Similarity=0.157 Sum_probs=55.6
Q ss_pred CCCcceeeeeecCCHHHHHHHHhc-CCCCCCCCCCCCcccc-cccccCcccccccccchhHHH-HHHhhcccchhhHhhc
Q 006573 528 DLPLSLCFAALRGDDLLLHQLLKR-GLDPNESDNNGRTALV-CLTHFNSEFFSIPISCNNVIK-FLLFNLFYFKQHIAAS 604 (640)
Q Consensus 528 ~l~~~l~~a~~~g~~~~v~~Ll~~-g~~~n~~d~~g~t~L~-~~~~~~~~~~~~~~~~~~~~~-~L~~~~~~~~~h~a~~ 604 (640)
...+-+|.++..+....++.+++- |...+.-|.+|.--+| ||.+.- .++...-..+-+. -..+..|++|||+|+.
T Consensus 573 r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~--ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~ 650 (975)
T KOG0520|consen 573 RDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGY--EWAFLPISADGVAIDIRDRNGWTPLHWAAF 650 (975)
T ss_pred cchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCC--ceeEEEEeecccccccccCCCCcccchHhh
Confidence 334445667777777777777764 5555555554444443 343322 1111111111111 1123357888899999
Q ss_pred CCCHHHHHHHHhccCCCCC
Q 006573 605 KGSENCVLLLLDYEADPNS 623 (640)
Q Consensus 605 ~g~~~~~~~L~~~ga~~~~ 623 (640)
.|++.++..|.+.||+.+.
T Consensus 651 ~G~e~l~a~l~~lga~~~~ 669 (975)
T KOG0520|consen 651 RGREKLVASLIELGADPGA 669 (975)
T ss_pred cCHHHHHHHHHHhcccccc
Confidence 9999999999999998764
No 164
>PF00060 Lig_chan: Ligand-gated ion channel; InterPro: IPR001320 The ability of synapses to modify their synaptic strength in response to activity is a fundamental property of the nervous system and may be an essential component of learning and memory. There are three classes of ionotropic glutamate receptor, namely NMDA (N-methyl-D-aspartate), AMPA (alpha-amino-3-hydroxy-5-methyl-4-isoxazole-4-propionic acid) and kainate receptors. They are believed to play critical roles in synaptic plasticity. At many synapses in the brain, transient activation of NMDA receptors leads to a persistent modification in the strength of synaptic transmission mediated by AMPA receptors and kainate receptors can act as the induction trigger for long-term changes in synaptic transmission [].; GO: 0004970 ionotropic glutamate receptor activity, 0005234 extracellular-glutamate-gated ion channel activity, 0016020 membrane; PDB: 3FAT_A 3KFM_A 3KEI_A 3EN3_A 3EPE_B 3FAS_A 2F34_A 3C34_B 3S2V_A 3GBB_B ....
Probab=88.88 E-value=0.63 Score=41.25 Aligned_cols=60 Identities=20% Similarity=0.315 Sum_probs=45.9
Q ss_pred chHHHHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006573 246 SLWIRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVVHG 306 (640)
Q Consensus 246 ~~~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~ 306 (640)
....+...++|+++.+++.-| ++..|++...+++.++..++++++.+...+.+++.+...
T Consensus 40 ~~~~~~~~~~~~~~~~~~~q~-~~~~~~s~s~Ril~~~w~l~~lil~~~Yta~L~s~Lt~~ 99 (148)
T PF00060_consen 40 RWRFSLSNSFWYTFGTLLQQG-SSIRPRSWSGRILLAFWWLFSLILIASYTANLTSFLTVP 99 (148)
T ss_dssp -HHHHHHHHHHHCCCCCHHHH-H------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred cCcccHHHHHHHHHHhhcccc-ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 445678889999998888744 678999999999999999999999999999999988754
No 165
>KOG3599 consensus Ca2+-modulated nonselective cation channel polycystin [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=88.46 E-value=12 Score=42.71 Aligned_cols=25 Identities=16% Similarity=0.537 Sum_probs=15.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhc
Q 006573 169 LFNMLRLWRLRRVSALFSRLEKDRN 193 (640)
Q Consensus 169 ~l~~lrllrl~r~~~~~~~l~~~~~ 193 (640)
++-.+|++|+.|+.+-++.+.+++.
T Consensus 562 fl~tiK~~k~l~f~~t~~~~s~TL~ 586 (798)
T KOG3599|consen 562 FLTTIKLWKVLRFNKTMSQFSSTLS 586 (798)
T ss_pred HHHHHHHHHhcchhHHHHHHHHHHH
Confidence 3445566666666666666666554
No 166
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=87.95 E-value=0.46 Score=53.77 Aligned_cols=72 Identities=14% Similarity=0.035 Sum_probs=55.1
Q ss_pred eecCCHHHHHHHH-hcCCCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhhc---------------ccchhh
Q 006573 537 ALRGDDLLLHQLL-KRGLDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNL---------------FYFKQH 600 (640)
Q Consensus 537 ~~~g~~~~v~~Ll-~~g~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~---------------~~~~~h 600 (640)
|..++.+.+-.+. -.|..+|.+|..|+||| ++|+.-|...++..|++-| +.++.-
T Consensus 615 ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL---------~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~ 685 (975)
T KOG0520|consen 615 CAALGYEWAFLPISADGVAIDIRDRNGWTPL---------HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAAD 685 (975)
T ss_pred hhhcCCceeEEEEeecccccccccCCCCccc---------chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhh
Confidence 4444554443443 45788999999999999 9999999999999999664 334577
Q ss_pred HhhcCCCHHHHHHHHhc
Q 006573 601 IAASKGSENCVLLLLDY 617 (640)
Q Consensus 601 ~a~~~g~~~~~~~L~~~ 617 (640)
.|..+|+..+.-+|-+.
T Consensus 686 la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 686 LARANGHKGIAGYLSEK 702 (975)
T ss_pred hhhcccccchHHHHhhh
Confidence 88888888888887765
No 167
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=87.58 E-value=0.29 Score=55.37 Aligned_cols=45 Identities=22% Similarity=0.103 Sum_probs=39.4
Q ss_pred ccchhhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeecccc
Q 006573 595 FYFKQHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFV 639 (640)
Q Consensus 595 ~~~~~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~ 639 (640)
+-+++|.|+..|..-++++|+++|||+|.+|..|++|++=+-..+
T Consensus 656 ~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g 700 (785)
T KOG0521|consen 656 GCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASG 700 (785)
T ss_pred ccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhc
Confidence 455679999999999999999999999999999999998654433
No 168
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=85.61 E-value=0.39 Score=47.81 Aligned_cols=42 Identities=14% Similarity=0.048 Sum_probs=36.9
Q ss_pred hhHhhcCCCHHHHHHHHhccCCCCCCCcccceeeeeeccccC
Q 006573 599 QHIAASKGSENCVLLLLDYEADPNSIGMLVTKYIIRFFGFVH 640 (640)
Q Consensus 599 ~h~a~~~g~~~~~~~L~~~ga~~~~~~~~g~~~~~~~~~~~~ 640 (640)
+..||+.|..+.|+.|++.|.++|+.|++...||+-|--.+|
T Consensus 40 lceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGH 81 (516)
T KOG0511|consen 40 LCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGH 81 (516)
T ss_pred HHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCc
Confidence 489999999999999999999999999999999876544443
No 169
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=85.53 E-value=39 Score=38.14 Aligned_cols=44 Identities=20% Similarity=0.373 Sum_probs=35.3
Q ss_pred hhhhHHHHhHHHHhhhHHhhh-----hccccccCCHHHHHHHHhccccc
Q 006573 359 DSLPKAIRSSISHYLFYSLMD-----KVYLFRGVSNDLLFQLVSEMKAE 402 (640)
Q Consensus 359 ~~lp~~lr~~i~~~~~~~~l~-----~~~~f~~ls~~~l~~l~~~~~~~ 402 (640)
..||++||+.|..+...++.. .-.++++||++..++|+.++-..
T Consensus 371 ~~LP~~LRqRi~~y~q~kw~~t~Gvdee~lL~~LP~~LR~dI~~hL~~~ 419 (727)
T KOG0498|consen 371 RQLPPDLRQRIRRYEQYKWLATRGVDEEELLQSLPKDLRRDIKRHLCLD 419 (727)
T ss_pred ccCCHHHHHHHHHHHHHHHhhccCcCHHHHHHhCCHHHHHHHHHHHhHH
Confidence 479999999999888776654 44788999999999988776443
No 170
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=82.79 E-value=14 Score=41.59 Aligned_cols=18 Identities=17% Similarity=0.093 Sum_probs=13.7
Q ss_pred HHHhhh-hhhhHhHhhccH
Q 006573 136 WKYASS-WLVFDVISTIPS 153 (640)
Q Consensus 136 ~~Yl~~-~f~~Dlis~lP~ 153 (640)
+.|++. |.++|++.+.-+
T Consensus 411 ~~y~~~~Wn~lDf~m~siy 429 (822)
T KOG3609|consen 411 DGYLAFWWNWLDFAMISIY 429 (822)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 789987 679999876543
No 171
>PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel). ; PDB: 2OPK_C 3BU7_B 2PHD_D 3NVC_A 3NKT_A 3NJZ_A 3NW4_A 3NST_A 3NL1_A 2H0V_A ....
Probab=79.78 E-value=11 Score=28.06 Aligned_cols=67 Identities=18% Similarity=0.230 Sum_probs=42.7
Q ss_pred ccccCCCeEEEeCCCCC-eEEEEEeceEEEEEeeCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccceEEEEe
Q 006573 402 EYFPPKEDVILQNEAPT-DFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLLRL 476 (640)
Q Consensus 402 ~~~~~ge~i~~~g~~~~-~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~~i 476 (640)
..++||+..-..-.+.. .+++|++|++.+.. +|+ ...+.+||.+=. -.+.+........+++.++.+
T Consensus 3 ~~~~pG~~~~~h~H~~~~e~~~vl~G~~~~~~--~~~---~~~l~~Gd~~~i---~~~~~H~~~n~~~~~~~~l~V 70 (71)
T PF07883_consen 3 VTLPPGGSIPPHRHPGEDEFFYVLSGEGTLTV--DGE---RVELKPGDAIYI---PPGVPHQVRNPGDEPARFLVV 70 (71)
T ss_dssp EEEETTEEEEEEEESSEEEEEEEEESEEEEEE--TTE---EEEEETTEEEEE---ETTSEEEEEEESSSEEEEEEE
T ss_pred EEECCCCCCCCEECCCCCEEEEEEECCEEEEE--ccE---EeEccCCEEEEE---CCCCeEEEEECCCCCEEEEEE
Confidence 35678886666655566 89999999999884 443 457889886521 123444444444556665543
No 172
>KOG4440 consensus NMDA selective glutamate-gated ion channel receptor subunit GRIN1 [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=79.25 E-value=5 Score=42.98 Aligned_cols=95 Identities=19% Similarity=0.248 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCccCcchHHHHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHH
Q 006573 206 FVTLFAVHCAGCFYYLLAARYHNPERTWIGASLGQNFLEKSLWIRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFM 285 (640)
Q Consensus 206 ~~~~~~~h~~ac~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~ 285 (640)
+.+++.+|..|...|.+....... .--++. .-.++...-..-.|+||+-..+...|-|+-+|.+-..+++++..+
T Consensus 574 ~lv~~SVhvVal~lYlLDrfSPFg-RFk~~d----s~~~ee~alnlssAmWF~WGVLLNSGigEgtPRSfSARvLGmVWa 648 (993)
T KOG4440|consen 574 LLVGLSVHVVALMLYLLDRFSPFG-RFKVND----SEEEEEDALNLSSAMWFSWGVLLNSGIGEGTPRSFSARVLGMVWA 648 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccc-ceeecc----CccchhhhcchhhhHHHHhHhhhccccCCCCCcchhHHHHHHHHh
Confidence 345567899999999887522111 101110 012334445677899999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 006573 286 LFNLGLTAYLIGNMTNLVVH 305 (640)
Q Consensus 286 i~g~~~~a~~i~~i~~~~~~ 305 (640)
=+.+++.|...+++++.+..
T Consensus 649 GFaMIiVASYTANLAAFLVL 668 (993)
T KOG4440|consen 649 GFAMIIVASYTANLAAFLVL 668 (993)
T ss_pred hhheeeehhhhhhhhhheee
Confidence 88888877778887776643
No 173
>COG4709 Predicted membrane protein [Function unknown]
Probab=77.95 E-value=12 Score=33.98 Aligned_cols=76 Identities=16% Similarity=0.218 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHhhhcc-cccCcchHHHHhhh--hHHHHhHHHHhhhHHhhhhccccccCCHHH
Q 006573 315 DTIQAASSFAQRNQLPIRLQDQMLAHLCLKFRT-DSEGLQQQETLDSL--PKAIRSSISHYLFYSLMDKVYLFRGVSNDL 391 (640)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~l~~rv~~y~~~~~~~-~~~~~~~~~~l~~l--p~~lr~~i~~~~~~~~l~~~~~f~~ls~~~ 391 (640)
+-++++++|+ +.+|++.+.++..+|+-+++. ..+|.+|+++.++| |+++-.|+....-.+-.+.-|-+++-+...
T Consensus 5 efL~eL~~yL--~~Lp~~~r~e~m~dyeehF~~a~~~GksE~EI~~~LG~P~eiA~ei~s~~~~k~~~~~~~~~n~~~ai 82 (195)
T COG4709 5 EFLNELEQYL--EGLPREERREIMYDYEEHFREAQEAGKSEEEIAKDLGDPKEIAAEILSERGIKKEEVKPTQKNVRRAI 82 (195)
T ss_pred HHHHHHHHHH--HhCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHhCCHHHHHHHHHHHccchHHhccCcccchHHHH
Confidence 3456677777 578999999999988877754 34678899999987 667777766665555555555555555443
Q ss_pred H
Q 006573 392 L 392 (640)
Q Consensus 392 l 392 (640)
+
T Consensus 83 i 83 (195)
T COG4709 83 I 83 (195)
T ss_pred H
Confidence 3
No 174
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=77.86 E-value=3.7 Score=38.33 Aligned_cols=50 Identities=30% Similarity=0.394 Sum_probs=41.6
Q ss_pred cCCHHHHHHHHhcCC-CCCC---CCCCCCcccccccccCcccccccccchhHHHHHHhhcccchhhHhhcCCCHHHHHHH
Q 006573 539 RGDDLLLHQLLKRGL-DPNE---SDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFNLFYFKQHIAASKGSENCVLLL 614 (640)
Q Consensus 539 ~g~~~~v~~Ll~~g~-~~n~---~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~h~a~~~g~~~~~~~L 614 (640)
..+..+++..+.+|. ++|. +-..|.|.| --|.+.++.|++.+|
T Consensus 227 ~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtML---------------------------------DNA~Ky~~~emi~~L 273 (284)
T PF06128_consen 227 SASYKVLEYFINRGLVDVNKKFQKVNSGDTML---------------------------------DNAMKYKNSEMIAFL 273 (284)
T ss_pred CCcHHHHHHHHhccccccchhhhccCCcchHH---------------------------------HhHHhcCcHHHHHHH
Confidence 346788899999985 7775 355788999 999999999999999
Q ss_pred HhccCCC
Q 006573 615 LDYEADP 621 (640)
Q Consensus 615 ~~~ga~~ 621 (640)
+++||-.
T Consensus 274 lk~GA~~ 280 (284)
T PF06128_consen 274 LKYGAIS 280 (284)
T ss_pred HHcCccc
Confidence 9999943
No 175
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=77.09 E-value=1.1 Score=46.61 Aligned_cols=38 Identities=32% Similarity=0.493 Sum_probs=36.0
Q ss_pred CcceeeeeecCCHHHHHHHHhcCCCCCCCCCCCCcccc
Q 006573 530 PLSLCFAALRGDDLLLHQLLKRGLDPNESDNNGRTALV 567 (640)
Q Consensus 530 ~~~l~~a~~~g~~~~v~~Ll~~g~~~n~~d~~g~t~L~ 567 (640)
++++|+|+..|..+++..+|..|.||-.+|..|+||-.
T Consensus 431 sT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ 468 (591)
T KOG2505|consen 431 STFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYS 468 (591)
T ss_pred chHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCccc
Confidence 57799999999999999999999999999999999984
No 176
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=74.03 E-value=17 Score=33.41 Aligned_cols=58 Identities=21% Similarity=0.347 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHhhhcc-cccCcchHHHHhhh--hHHHHhHHHHhh
Q 006573 314 RDTIQAASSFAQRNQLPIRLQDQMLAHLCLKFRT-DSEGLQQQETLDSL--PKAIRSSISHYL 373 (640)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~l~~rv~~y~~~~~~~-~~~~~~~~~~l~~l--p~~lr~~i~~~~ 373 (640)
++=+++++++++ ++|++-++++.+||+-+++. ..+|.+|+++.++| |+++-+++..+.
T Consensus 4 ~efL~~L~~~L~--~lp~~e~~e~l~~Y~e~f~d~~~~G~sEeeii~~LG~P~~iA~~i~~~~ 64 (181)
T PF08006_consen 4 NEFLNELEKYLK--KLPEEEREEILEYYEEYFDDAGEEGKSEEEIIAELGSPKEIAREILAEY 64 (181)
T ss_pred HHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHhhhCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 344667778886 59999999999999887753 23677899999986 777777766543
No 177
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=69.15 E-value=2.7 Score=38.06 Aligned_cols=54 Identities=22% Similarity=0.204 Sum_probs=47.7
Q ss_pred cceeeeeecCCHHHHHHHHhcC-CCCCCCCCCCCcccccccccCcccccccccchhHHHHHHhh
Q 006573 531 LSLCFAALRGDDLLLHQLLKRG-LDPNESDNNGRTALVCLTHFNSEFFSIPISCNNVIKFLLFN 593 (640)
Q Consensus 531 ~~l~~a~~~g~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~~~~~~~~~~~~~~~~~~~~~~L~~~ 593 (640)
++++.|+.+|.-+.+..|+.+| +.+...|..|.+++ -++...+..+.++.|.++
T Consensus 14 Talmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaa---------qlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 14 TALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAA---------QLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred hHHHHHhhhcchhHHHHHhccCcccccccccccchHH---------HHHHhcChHHHHHHHHHH
Confidence 4566799999999999999999 78999999999999 777778888888888876
No 178
>TIGR03037 anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase. Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase. This enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.
Probab=65.90 E-value=19 Score=32.04 Aligned_cols=62 Identities=18% Similarity=0.163 Sum_probs=40.6
Q ss_pred EEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccceEEEEeeHH
Q 006573 411 ILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLLRLNRT 479 (640)
Q Consensus 411 ~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~~i~~~ 479 (640)
++.. ..+++|++++|.+.+...++|+. ....+++||+|=-- .+.| .+-++.++|.++.|.+.
T Consensus 43 ~H~~-~tdE~FyqleG~~~l~v~d~g~~-~~v~L~eGd~flvP---~gvp--HsP~r~~~t~~LvIE~~ 104 (159)
T TIGR03037 43 FHDD-PGEEFFYQLKGEMYLKVTEEGKR-EDVPIREGDIFLLP---PHVP--HSPQRPAGSIGLVIERK 104 (159)
T ss_pred cccC-CCceEEEEEcceEEEEEEcCCcE-EEEEECCCCEEEeC---CCCC--cccccCCCcEEEEEEeC
Confidence 4443 37899999999999976555542 24589999987322 1222 23344677888888764
No 179
>PLN03223 Polycystin cation channel protein; Provisional
Probab=65.82 E-value=84 Score=37.81 Aligned_cols=61 Identities=16% Similarity=0.249 Sum_probs=31.4
Q ss_pred HHHHHHhhhhhhcccccCCcccCCc-hh------hHHHHHHH-HHHHHHHHHHHHHHHHHHHhhchhhH
Q 006573 251 YVTSMYWSITTLTTVGYGDLHPVNT-RE------MVFDILFM-LFNLGLTAYLIGNMTNLVVHGTSRTR 311 (640)
Q Consensus 251 y~~s~yw~~~t~ttvGygd~~p~t~-~e------~~~~i~~~-i~g~~~~a~~i~~i~~~~~~~~~~~~ 311 (640)
...++.-++.|+..+-.||...... .. .+++.++. .+-++++-+++..+..++.......+
T Consensus 1358 ~FSTf~sSL~TLFqMLLGDfdYF~eDLk~l~e~nrVLGPIYFfSFILLV~FILLNMFIAII~DSFsEVK 1426 (1634)
T PLN03223 1358 HFSDMTDSINSLFENLLGDITYFNEDLKNLTGLQFVVGMIYFYSYNIFVFMILFNFLLAIICDAFGEVK 1426 (1634)
T ss_pred hhcCHHHHHHHHHHHHHcCchHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777777777787743111 11 12232222 22233334455666677766665554
No 180
>KOG2378 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=65.67 E-value=11 Score=39.08 Aligned_cols=45 Identities=18% Similarity=0.351 Sum_probs=38.9
Q ss_pred CCCeeechhhhcCCCeeeEEEEc-cceEEEEeeHHHHHHHHHhchh
Q 006573 446 TGEICGEIGVLCYRPQLFTVRTK-RLSQLLRLNRTTFLNIVQANVG 490 (640)
Q Consensus 446 ~G~~fGe~~l~~~~~~~~~~~a~-~~~~v~~i~~~~f~~ll~~~~~ 490 (640)
+||-||.+++....||.+++... .+|.++++++.+|.+++++..+
T Consensus 1 eGddfgklalvnd~praativl~ed~~~fl~vDk~~Fn~I~~~vEa 46 (573)
T KOG2378|consen 1 EGDDFGKLALVNDAPRAATIVLREDNCHFLRVDKHDFNRILHDVEA 46 (573)
T ss_pred CCcccchhccccccccccceeeecCCCcceeecHHHHHHHHHhhhh
Confidence 58999999999999999887665 5799999999999999876643
No 181
>COG3718 IolB Uncharacterized enzyme involved in inositol metabolism [Carbohydrate transport and metabolism]
Probab=63.12 E-value=21 Score=33.57 Aligned_cols=67 Identities=19% Similarity=0.269 Sum_probs=46.5
Q ss_pred cccccccCCCeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeech----hhhcCCC---------eeeEE
Q 006573 399 MKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEI----GVLCYRP---------QLFTV 465 (640)
Q Consensus 399 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~----~l~~~~~---------~~~~~ 465 (640)
++...+++|+..-......+...+++.|++.+.. .|+.||++ +.|.+.| +.+++
T Consensus 31 F~~~~L~~Ges~~~~~~~~E~clV~v~Gk~~vs~-------------~g~~f~~iG~R~SvFe~~p~~~vYvp~g~~~~v 97 (270)
T COG3718 31 FRLLRLAAGESATEETGDRERCLVLVTGKATVSA-------------HGSTFGEIGTRMSVFERKPPDSVYVPAGSAFSV 97 (270)
T ss_pred EEEEEccCCCcccccCCCceEEEEEEeeeEEEee-------------ccchHhhcccccccccCCCCCeEEecCCceEEE
Confidence 4556788899887777777778889999998865 23334333 3444433 56889
Q ss_pred EEccceEEEEeeH
Q 006573 466 RTKRLSQLLRLNR 478 (640)
Q Consensus 466 ~a~~~~~v~~i~~ 478 (640)
.|.+++++..-+.
T Consensus 98 tA~t~~~vAvC~A 110 (270)
T COG3718 98 TATTDLEVAVCSA 110 (270)
T ss_pred EeecceEEEEEeC
Confidence 9999988876654
No 182
>PF05899 Cupin_3: Protein of unknown function (DUF861); InterPro: IPR008579 The function of the proteins in this entry are unknown. They contain the conserved barrel domain of the 'cupin' superfamily and members are specific to plants and bacteria.; PDB: 1RC6_A 3MYX_A 1O5U_A 2K9Z_A 1LKN_A 3ES4_A 1SFN_B 3BCW_A.
Probab=57.19 E-value=23 Score=27.03 Aligned_cols=40 Identities=18% Similarity=0.255 Sum_probs=27.6
Q ss_pred cCCCeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCee
Q 006573 405 PPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEIC 450 (640)
Q Consensus 405 ~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~f 450 (640)
.||..-..-. .+++.+|++|.+.+... +|. ...+++||.|
T Consensus 15 ~pg~~~~~~~--~~E~~~vleG~v~it~~-~G~---~~~~~aGD~~ 54 (74)
T PF05899_consen 15 TPGKFPWPYP--EDEFFYVLEGEVTITDE-DGE---TVTFKAGDAF 54 (74)
T ss_dssp ECEEEEEEES--SEEEEEEEEEEEEEEET-TTE---EEEEETTEEE
T ss_pred CCceeEeeCC--CCEEEEEEEeEEEEEEC-CCC---EEEEcCCcEE
Confidence 4555333332 38899999999999763 554 3588999976
No 183
>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=56.80 E-value=2.7e+02 Score=29.70 Aligned_cols=74 Identities=18% Similarity=0.392 Sum_probs=45.9
Q ss_pred hhhhHHHHhHHHHhhh-----HHhhhhccccccCCHHHHHHHHhccccccccC-------------------CCeEEEeC
Q 006573 359 DSLPKAIRSSISHYLF-----YSLMDKVYLFRGVSNDLLFQLVSEMKAEYFPP-------------------KEDVILQN 414 (640)
Q Consensus 359 ~~lp~~lr~~i~~~~~-----~~~l~~~~~f~~ls~~~l~~l~~~~~~~~~~~-------------------ge~i~~~g 414 (640)
.++|..|+..+..-.. ..........+.||+....+++..++..+.++ ...++.+|
T Consensus 259 RkV~~~lq~rVikwfdYlwa~~~~~DEeevl~~LP~kL~aeIA~nvh~dTLkkV~iF~~ce~~lL~elVLklk~qvfSPg 338 (536)
T KOG0500|consen 259 RKVPKALQTRVIKWFDYLWAHKKIVDEEEVLKLLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLKPQVFSPG 338 (536)
T ss_pred hcccHHHHHHHHHHHHHHHhccccccHHHHHHhCCHHHHhHhHHHHHHHHHHhhhHHHhcchhHHHHHHHHhcceeeCCC
Confidence 3567777776654332 23344456777889888888877766544433 33466666
Q ss_pred CCCCeEEEEEeceE--EEEEeeCCc
Q 006573 415 EAPTDFYILVTGAV--DLLVLKNGV 437 (640)
Q Consensus 415 ~~~~~ly~I~~G~v--~v~~~~~g~ 437 (640)
| |+..+|.+ +.+.-+.|+
T Consensus 339 D-----yICrKGdvgkEMyIVk~G~ 358 (536)
T KOG0500|consen 339 D-----YICRKGDVGKEMYIVKEGK 358 (536)
T ss_pred C-----eEEecCcccceEEEEEccE
Confidence 6 88899987 334445564
No 184
>KOG1053 consensus Glutamate-gated NMDA-type ion channel receptor subunit GRIN2A and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=55.24 E-value=1.6e+02 Score=33.73 Aligned_cols=54 Identities=13% Similarity=0.337 Sum_probs=39.4
Q ss_pred HHHHHHH--hhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006573 250 RYVTSMY--WSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVVH 305 (640)
Q Consensus 250 ~y~~s~y--w~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~ 305 (640)
.+..|+| |+++-=-+|- --.|+.+..++...+.+++++++.|...+++++...+
T Consensus 609 tigkaiwllwaLvFnnsVp--v~nPKgtTskiMv~VWAfFavifLAsYTANLAAfMIq 664 (1258)
T KOG1053|consen 609 TIGKAIWLLWALVFNNSVP--VENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQ 664 (1258)
T ss_pred ehhhHHHHHHHHHhCCCcC--CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4445555 6666433333 2356788899999999999999999999998887643
No 185
>PRK13290 ectC L-ectoine synthase; Reviewed
Probab=54.52 E-value=68 Score=27.48 Aligned_cols=69 Identities=12% Similarity=0.081 Sum_probs=41.3
Q ss_pred ccccccCCCeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccceEEEEe
Q 006573 400 KAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLLRL 476 (640)
Q Consensus 400 ~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~~i 476 (640)
....++||...-..-....++++|++|++.+....+|+ ...+.+||.+--- .+.+. .+++.++++++.+
T Consensus 38 ~~~~l~pG~~~~~h~h~~~E~~yVL~G~~~~~~i~~g~---~~~L~aGD~i~~~---~~~~H--~~~N~e~~~~l~v 106 (125)
T PRK13290 38 HETTIYAGTETHLHYKNHLEAVYCIEGEGEVEDLATGE---VHPIRPGTMYALD---KHDRH--YLRAGEDMRLVCV 106 (125)
T ss_pred EEEEECCCCcccceeCCCEEEEEEEeCEEEEEEcCCCE---EEEeCCCeEEEEC---CCCcE--EEEcCCCEEEEEE
Confidence 34567888654332222246999999999987211243 3588999987422 23343 3333477777665
No 186
>KOG1054 consensus Glutamate-gated AMPA-type ion channel receptor subunit GluR2 and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=54.48 E-value=26 Score=37.61 Aligned_cols=55 Identities=15% Similarity=0.338 Sum_probs=46.8
Q ss_pred HHHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 006573 249 IRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVV 304 (640)
Q Consensus 249 ~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~ 304 (640)
-....|+||++..+.--| -|+.|.+..+++.+.+.-++-+++.+...+++++.+.
T Consensus 594 FgifNsLWFsLgAFMQQG-~DI~PRslSGRIvggvWWFFTlIIiSSYTANLAAFLT 648 (897)
T KOG1054|consen 594 FGIFNSLWFSLGAFMQQG-CDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLT 648 (897)
T ss_pred chhhHHHHHHHHHHHhcC-CCCCccccccceeccchhhhhhhhhhhhhhHHHHHHh
Confidence 357799999999998888 6999999999999999988888887777777776654
No 187
>PF13314 DUF4083: Domain of unknown function (DUF4083)
Probab=53.95 E-value=80 Score=22.64 Aligned_cols=15 Identities=0% Similarity=0.136 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHH
Q 006573 311 RKFRDTIQAASSFAQ 325 (640)
Q Consensus 311 ~~~~~~~~~~~~~~~ 325 (640)
...++|++++-+.+.
T Consensus 42 ~~~eqKLDrIIeLLE 56 (58)
T PF13314_consen 42 DSMEQKLDRIIELLE 56 (58)
T ss_pred hHHHHHHHHHHHHHc
Confidence 357777777776553
No 188
>PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional
Probab=53.61 E-value=42 Score=30.50 Aligned_cols=59 Identities=19% Similarity=0.190 Sum_probs=39.4
Q ss_pred CCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccceEEEEeeHH
Q 006573 415 EAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLLRLNRT 479 (640)
Q Consensus 415 ~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~~i~~~ 479 (640)
++.+++|++++|.+.+...++|+- ....+.+||+|=-- .+.|. +-++.++|..+.+.+.
T Consensus 52 ~~tdE~FyqleG~~~l~v~d~g~~-~~v~L~eGd~fllP---~gvpH--sP~r~~~tv~LviE~~ 110 (177)
T PRK13264 52 DPGEEFFYQLEGDMYLKVQEDGKR-RDVPIREGEMFLLP---PHVPH--SPQREAGSIGLVIERK 110 (177)
T ss_pred CCCceEEEEECCeEEEEEEcCCce-eeEEECCCCEEEeC---CCCCc--CCccCCCeEEEEEEeC
Confidence 567899999999998877555532 24588999987322 23332 2344678888888654
No 189
>smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
Probab=52.93 E-value=85 Score=27.57 Aligned_cols=78 Identities=13% Similarity=0.123 Sum_probs=47.5
Q ss_pred cccccccCCCeEEEeCC-CCCeEEEEEeceEEEEEe-eCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccceEEEEe
Q 006573 399 MKAEYFPPKEDVILQNE-APTDFYILVTGAVDLLVL-KNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLLRL 476 (640)
Q Consensus 399 ~~~~~~~~ge~i~~~g~-~~~~ly~I~~G~v~v~~~-~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~~i 476 (640)
+....+.||...-..-. ..+++++|++|...+... .+|++.....+.+||.+=.- .+.+........+++.++.+
T Consensus 32 ~~~~~i~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~~~~~~~~~~l~~GD~~~ip---~g~~H~~~n~~~~~~~~l~~ 108 (146)
T smart00835 32 AARVNLEPGGMLPPHYHPRATELLYVVRGEGRVGVVDPNGNKVYDARLREGDVFVVP---QGHPHFQVNSGDENLEFVAF 108 (146)
T ss_pred EEEEEecCCcCcCCeeCCCCCEEEEEEeCeEEEEEEeCCCCeEEEEEecCCCEEEEC---CCCEEEEEcCCCCCEEEEEE
Confidence 34456777776544433 357899999999999764 33455667789999976432 22333233333456666655
Q ss_pred eHH
Q 006573 477 NRT 479 (640)
Q Consensus 477 ~~~ 479 (640)
+-.
T Consensus 109 ~~~ 111 (146)
T smart00835 109 NTN 111 (146)
T ss_pred ecC
Confidence 443
No 190
>PRK09108 type III secretion system protein HrcU; Validated
Probab=49.63 E-value=2.4e+02 Score=29.10 Aligned_cols=63 Identities=8% Similarity=0.128 Sum_probs=31.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 006573 276 REMVFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQML 338 (640)
Q Consensus 276 ~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~ 338 (640)
...+...+..++..+..++++-.+.++.-+.....++.+=.-+++++-.|+..=+|+++.|.+
T Consensus 178 ~~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMSkqEvK~E~K~~EGdP~iK~rrR 240 (353)
T PRK09108 178 AQILWTVLMKLLAVAAGVFLLVGAADWKIQRWLFIRDNRMSKDEVKREHKESEGDPHIKGERK 240 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHH
Confidence 334445555555555555555555555544444333333334455555555555555555544
No 191
>PF02037 SAP: SAP domain; InterPro: IPR003034 The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA binding domain found in diverse nuclear proteins involved in chromosomal organisation [], including in apoptosis []. In yeast, SAP is found in the most distal N-terminal region of E3 SUMO-protein ligase SIZ1, where it is involved in nuclear localization [].; GO: 0003676 nucleic acid binding; PDB: 2RNN_A 1JEQ_A 2KW9_A 2KVU_A 2DO1_A 1ZBU_B 1ZBH_A 2DO5_A 2RNO_A 1H1J_S ....
Probab=43.76 E-value=57 Score=20.69 Aligned_cols=26 Identities=19% Similarity=0.279 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhCCCC-----HHHHHHHHHHH
Q 006573 316 TIQAASSFAQRNQLP-----IRLQDQMLAHL 341 (640)
Q Consensus 316 ~~~~~~~~~~~~~l~-----~~l~~rv~~y~ 341 (640)
+..++.++++.+++| .+|.+|+.+|+
T Consensus 5 ~v~eLk~~l~~~gL~~~G~K~~Li~Rl~~~l 35 (35)
T PF02037_consen 5 TVAELKEELKERGLSTSGKKAELIERLKEHL 35 (35)
T ss_dssp HHHHHHHHHHHTTS-STSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHCCCCCCCCHHHHHHHHHHhC
Confidence 356788899999988 57888888764
No 192
>TIGR00328 flhB flagellar biosynthetic protein FlhB. FlhB and its functionally equivalent orthologs, from among a larger superfamily of proteins involved in type III protein export systems, are specifically involved in flagellar protein export. The seed members are restricted and the trusted cutoff is set high such that the proteins gathered by this model play roles specifically related to flagellar structures. Full-length homologs scoring below the trusted cutoff are involved in peptide export but not necessarily in the creation of flagella.
Probab=40.59 E-value=3.9e+02 Score=27.51 Aligned_cols=62 Identities=13% Similarity=0.074 Sum_probs=30.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 006573 277 EMVFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQML 338 (640)
Q Consensus 277 e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~ 338 (640)
..+...+..++..+..++++-.+.+..-+.....++.+=.-+++++-.|+..=+|+++.|.+
T Consensus 177 ~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lrMskqEVKdE~K~~EGdP~iK~rrR 238 (347)
T TIGR00328 177 TNFLDIAKSLLILVLLLLLVIAVFDYFFQRWQYIKSLKMTKQEVKDELKQSEGDPEVKGRIR 238 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCHHHHHHHH
Confidence 33444444455555555555445555444433333333334455555555555555555544
No 193
>PF07697 7TMR-HDED: 7TM-HD extracellular; InterPro: IPR011624 This entry represents the extracellular domain of the 7TM-HD (7TM Receptors with HD hydrolase) protein family []. These proteins are known or predicted, to posses metal-dependent phospohydrolase activity.
Probab=40.42 E-value=1.3e+02 Score=28.44 Aligned_cols=33 Identities=9% Similarity=0.050 Sum_probs=27.6
Q ss_pred cCCHHHHHHHHhcccccc--ccCCCeEEEeCCCCC
Q 006573 386 GVSNDLLFQLVSEMKAEY--FPPKEDVILQNEAPT 418 (640)
Q Consensus 386 ~ls~~~l~~l~~~~~~~~--~~~ge~i~~~g~~~~ 418 (640)
..++...++......+.. +++||.|+++|+..+
T Consensus 173 ~~T~~~~~~a~~~V~pv~~~V~~Ge~IV~kGe~VT 207 (222)
T PF07697_consen 173 EATEKAREEALASVSPVRGMVKKGEVIVRKGEIVT 207 (222)
T ss_pred HHHHHHHHHHHhcCCchHhhccCCCEEecCCcEeC
Confidence 467777888888888887 999999999999654
No 194
>COG4792 EscU Type III secretory pathway, component EscU [Intracellular trafficking and secretion]
Probab=40.27 E-value=3.9e+02 Score=26.63 Aligned_cols=40 Identities=20% Similarity=0.207 Sum_probs=18.2
Q ss_pred hhhhcccccCCcccCCchhhHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 006573 259 ITTLTTVGYGDLHPVNTREMVFDILFMLF-NLGLTAYLIGNMTNLVV 304 (640)
Q Consensus 259 ~~t~ttvGygd~~p~t~~e~~~~i~~~i~-g~~~~a~~i~~i~~~~~ 304 (640)
+.-+++-|-+-..| +++.+.-.+ +.+..+|++-.+.+..-
T Consensus 165 ~~~lp~CG~~C~~~------Vv~~~~~~L~~g~~~~ylv~sv~Dy~f 205 (349)
T COG4792 165 FLYLPGCGLYCALP------VVSFLLRLLWVGVAVGYLVFSVADYAF 205 (349)
T ss_pred HhhccccccchHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555444444 223222222 23355666665555543
No 195
>PF14377 DUF4414: Domain of unknown function (DUF4414)
Probab=40.08 E-value=55 Score=27.19 Aligned_cols=46 Identities=20% Similarity=0.333 Sum_probs=32.6
Q ss_pred CCCCHHHHHHHHHHHHhhhccc---------ccCcchHHHHhhhhHHHHhHHHHh
Q 006573 327 NQLPIRLQDQMLAHLCLKFRTD---------SEGLQQQETLDSLPKAIRSSISHY 372 (640)
Q Consensus 327 ~~l~~~l~~rv~~y~~~~~~~~---------~~~~~~~~~l~~lp~~lr~~i~~~ 372 (640)
.-+|++++..|...+...-... ....+...++..||++||.+|...
T Consensus 51 ~ALP~diR~EVl~qe~~~~~~~~~~~~~~~~~~~~d~asflatl~p~LR~evL~~ 105 (108)
T PF14377_consen 51 AALPPDIREEVLAQERRERRRQERQQNARQHPQEMDNASFLATLPPELRREVLLD 105 (108)
T ss_pred HhCCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCHHHHHHhCCHHHHHHHhhc
Confidence 4578999999988775432211 123455689999999999998654
No 196
>PRK08156 type III secretion system protein SpaS; Validated
Probab=39.92 E-value=4.1e+02 Score=27.52 Aligned_cols=60 Identities=10% Similarity=0.005 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 006573 279 VFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQML 338 (640)
Q Consensus 279 ~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~ 338 (640)
+...+..++..+..++++-.+.+..-+.....++.+=.-+++++-.|+..=+|+++.|++
T Consensus 174 ~~~~~~~l~~~~~~~~lvia~~D~~~Qr~~~~k~lkMSkqEvKdE~Ke~EGdP~iK~r~R 233 (361)
T PRK08156 174 WRELLVKLVLTFLACALIVLILDFIAEYFLHMKDMKMDKQEVKREYKEQEGNPEIKSKRR 233 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHH
Confidence 333334444444444444445555444333333333333444555555555555555444
No 197
>PRK13109 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=39.65 E-value=4.1e+02 Score=27.50 Aligned_cols=61 Identities=13% Similarity=0.074 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 006573 279 VFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQMLA 339 (640)
Q Consensus 279 ~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~~ 339 (640)
+...+..+++.+..++++-.+.+..-+.....++.+=.-+++++-+|+..=+|+++.|.++
T Consensus 188 ~~~~~~~l~~~~~~~~~via~~D~~~q~~~~~k~lkMSkqEVKdE~Ke~EGdP~iK~r~Rq 248 (358)
T PRK13109 188 ILTVAIRLVSAVAIATIVLVALDLVWARFHWRRSLRMTKQEIKDEHKQAEGDPSVKARLRS 248 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 4444444555555555555555555444443333333445555555555555555555543
No 198
>PRK12721 secretion system apparatus protein SsaU; Reviewed
Probab=38.66 E-value=4.2e+02 Score=27.30 Aligned_cols=63 Identities=10% Similarity=0.135 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 006573 277 EMVFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQMLA 339 (640)
Q Consensus 277 e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~~ 339 (640)
..+...+..+++.+..++++-.+.+..-+.....++.+=.-+++++-.|+..=+|+++.|.++
T Consensus 177 ~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMskqEvKdE~Ke~EGdP~iK~rrR~ 239 (349)
T PRK12721 177 PVVSTLIFWLWGGLLACYLVFGILDYSFQRYKIMKQLKMSKDDVKQEYKDSEGDPEIKQKRRE 239 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 334444455555555555555555555544444433333445555555666666666555543
No 199
>PRK12468 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=38.48 E-value=3.9e+02 Score=27.99 Aligned_cols=59 Identities=10% Similarity=-0.016 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 006573 280 FDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQML 338 (640)
Q Consensus 280 ~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~ 338 (640)
...+..++..+..++++-.+.+++-+.....++.+=.-+++++-+|+..=+|+++.|.+
T Consensus 187 ~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMSkqEvKdE~K~~EGdP~iK~r~R 245 (386)
T PRK12468 187 LHLIIFCGLVVVLGLSPMVGFDVFYQITSHIKKLRMTKQDIRDEFKNQEGDPHVKGRIR 245 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHH
Confidence 33333444444444444445555444433333333334455555555555555555554
No 200
>KOG1052 consensus Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits [Inorganic ion transport and metabolism; Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=38.09 E-value=81 Score=35.80 Aligned_cols=56 Identities=18% Similarity=0.246 Sum_probs=46.9
Q ss_pred HHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 006573 250 RYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVVHG 306 (640)
Q Consensus 250 ~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~ 306 (640)
....++|.++.++..-| ++..|.+...+++..+..++++++.+.-.+++++.+...
T Consensus 381 ~~~~~~~~~~~~~~~q~-~~~~p~~~~~Rll~~~w~~~~lil~ssYTa~L~a~Lt~~ 436 (656)
T KOG1052|consen 381 SLLNCLWLTVGSLLQQG-SDEIPRSLSTRLLLGAWWLFVLILISSYTANLTAFLTVP 436 (656)
T ss_pred ecccchhhhhHHHhccC-CCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34456788888888877 568999999999999999999999999999999888654
No 201
>PRK06298 type III secretion system protein; Validated
Probab=37.74 E-value=4.7e+02 Score=27.06 Aligned_cols=53 Identities=6% Similarity=-0.035 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 006573 286 LFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQML 338 (640)
Q Consensus 286 i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~ 338 (640)
++..+..++++-.+.+..-+.....++.+=.-+++++-+|+..=+|+++.|.+
T Consensus 187 l~~~~~~~~~via~~D~~~qr~~~~k~lkMSkqEvKdE~K~~EGdP~iK~rrR 239 (356)
T PRK06298 187 AVTSIGIFFLVVAVLDLVYQRHNFAKELKMEKFEVKQEFKDTEGNPEIKGRRR 239 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHH
Confidence 33333334444444444443333333333334445555555555555555544
No 202
>PF12973 Cupin_7: ChrR Cupin-like domain; PDB: 3O14_B 2Z2S_F 2Q1Z_B 3EBR_A.
Probab=37.40 E-value=1.4e+02 Score=23.63 Aligned_cols=64 Identities=11% Similarity=0.079 Sum_probs=41.6
Q ss_pred cccccccCCCeEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccceEEEEe
Q 006573 399 MKAEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLLRL 476 (640)
Q Consensus 399 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~~i 476 (640)
+....+.||..+-...-.+....+|++|...- .++ .+.+||++=+ ......+..+.+.|.++.-
T Consensus 26 ~~L~r~~pG~~~p~H~H~g~ee~~VLeG~~~d---~~~------~~~~G~~~~~-----p~g~~h~~~s~~gc~~~vk 89 (91)
T PF12973_consen 26 VSLLRLEPGASLPRHRHPGGEEILVLEGELSD---GDG------RYGAGDWLRL-----PPGSSHTPRSDEGCLILVK 89 (91)
T ss_dssp EEEEEE-TTEEEEEEEESS-EEEEEEECEEEE---TTC------EEETTEEEEE------TTEEEEEEESSCEEEEEE
T ss_pred EEEEEECCCCCcCccCCCCcEEEEEEEEEEEE---CCc------cCCCCeEEEe-----CCCCccccCcCCCEEEEEE
Confidence 44567888888877777777888999998742 222 4577776532 2234566778889988763
No 203
>PF10011 DUF2254: Predicted membrane protein (DUF2254); InterPro: IPR018723 Members of this family of proteins comprises various hypothetical and putative membrane proteins. Their exact function, has not, as yet, been defined.
Probab=37.13 E-value=1.3e+02 Score=31.31 Aligned_cols=58 Identities=14% Similarity=0.301 Sum_probs=41.3
Q ss_pred HHHHHHHHHhhhhhhcccccCCcccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 006573 248 WIRYVTSMYWSITTLTTVGYGDLHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVVH 305 (640)
Q Consensus 248 ~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~ 305 (640)
.-.|+.+|-+++..+.+++-++..........+++++.+++++.+.+.+..++..++-
T Consensus 98 Lg~Figtfvy~l~~l~~i~~~~~~~~p~~~~~~a~~l~i~~v~~li~fI~~i~~~iqv 155 (371)
T PF10011_consen 98 LGTFIGTFVYSLLVLIAIRSGDYGSVPRLSVFIALALAILSVVLLIYFIHHIARSIQV 155 (371)
T ss_pred HHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 3467888888888887777554423333446777888888888888888888766643
No 204
>COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=37.06 E-value=79 Score=27.05 Aligned_cols=47 Identities=15% Similarity=0.312 Sum_probs=32.3
Q ss_pred cccccccCCCeE-EEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCee
Q 006573 399 MKAEYFPPKEDV-ILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEIC 450 (640)
Q Consensus 399 ~~~~~~~~ge~i-~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~f 450 (640)
+....++||+-+ .+.-...++.|+|++|...+... |+ ...+++||++
T Consensus 38 ~~~~~v~pg~~~~~~~H~~~dE~~~Vl~G~g~v~~~--~~---~~~v~~gd~~ 85 (127)
T COG0662 38 IARILVKPGEEISLHHHHHRDEHWYVLEGTGKVTIG--GE---EVEVKAGDSV 85 (127)
T ss_pred EEEEEECCCcccCcccccCcceEEEEEeeEEEEEEC--CE---EEEecCCCEE
Confidence 445567777764 33344478999999999999773 43 3377888865
No 205
>PRK05702 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=36.16 E-value=4.9e+02 Score=26.94 Aligned_cols=63 Identities=13% Similarity=0.116 Sum_probs=27.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 006573 276 REMVFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQML 338 (640)
Q Consensus 276 ~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~ 338 (640)
...+...+..++..+..++++-.+.+..-+.....++.+=.-+++++-.|+..=+|+++.|.+
T Consensus 183 ~~~~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMskqEVKdE~Ke~EGdP~iK~rrR 245 (359)
T PRK05702 183 LGHALDLVLKLLLLVVLALLVIAAIDVPFQRWQYLKKLKMTKQEVKDEHKQSEGDPEVKGRIR 245 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCHHHHHHHH
Confidence 333444444444444444444444444443333332222233444444444444444444443
No 206
>COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=35.72 E-value=64 Score=27.67 Aligned_cols=49 Identities=14% Similarity=0.145 Sum_probs=37.8
Q ss_pred cccccccCCCeEEEeCCC-CCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeec
Q 006573 399 MKAEYFPPKEDVILQNEA-PTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGE 452 (640)
Q Consensus 399 ~~~~~~~~ge~i~~~g~~-~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe 452 (640)
+....++||+.+-..--+ .+...+|++|.+++... |. ...+.+||++-.
T Consensus 45 ~~~v~~~~G~~~~~H~hp~~~~~~~Vl~G~~~~~~~--g~---~~~l~~Gd~i~i 94 (131)
T COG1917 45 VVLVTFEPGAVIPWHTHPLGEQTIYVLEGEGTVQLE--GE---KKELKAGDVIII 94 (131)
T ss_pred EEEEEECCCcccccccCCCcceEEEEEecEEEEEec--CC---ceEecCCCEEEE
Confidence 345678888888877776 77899999999998774 43 347889998754
No 207
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=35.43 E-value=2.3e+02 Score=22.68 Aligned_cols=27 Identities=7% Similarity=0.160 Sum_probs=19.5
Q ss_pred HhhchhhHHHHHHHHHHHHHHHhCCCC
Q 006573 304 VHGTSRTRKFRDTIQAASSFAQRNQLP 330 (640)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~ 330 (640)
....+..++.++.+++.++.++++++.
T Consensus 64 nDcpeA~~eL~~eI~eAK~dLr~kGv~ 90 (91)
T PF08285_consen 64 NDCPEAAKELQKEIKEAKADLRKKGVD 90 (91)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 333455566778888888999988864
No 208
>PRK04190 glucose-6-phosphate isomerase; Provisional
Probab=34.11 E-value=1.5e+02 Score=27.61 Aligned_cols=50 Identities=14% Similarity=0.141 Sum_probs=33.0
Q ss_pred ccccccCCCeE---------EEeCCCCCeEEEEEeceEEEEEe-eCCceEEEEEecCCCee
Q 006573 400 KAEYFPPKEDV---------ILQNEAPTDFYILVTGAVDLLVL-KNGVEQVVGEAKTGEIC 450 (640)
Q Consensus 400 ~~~~~~~ge~i---------~~~g~~~~~ly~I~~G~v~v~~~-~~g~~~~~~~l~~G~~f 450 (640)
....+.||... +++.....++|++++|...+..+ .+|. .....+.+||.+
T Consensus 71 g~t~l~PG~~g~e~~mt~gH~H~~~~~~EiyyvlsG~g~~~l~~~~G~-~~~~~v~pGd~v 130 (191)
T PRK04190 71 GTTRLYPGKVGDEYFMTKGHFHAKADRAEIYYGLKGKGLMLLQDPEGE-ARWIEMEPGTVV 130 (191)
T ss_pred EEEEECCCcEecccccCCCeEcCCCCCCEEEEEEeCEEEEEEecCCCc-EEEEEECCCCEE
Confidence 34556777742 34444456999999999988764 2332 345688899875
No 209
>TIGR01404 FlhB_rel_III type III secretion protein, YscU/HrpY family. This model represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FlhB (TIGRFAMs model TIGR00328). This model may not identify all type III secretion system FlhB homologs.
Probab=30.55 E-value=6.1e+02 Score=26.05 Aligned_cols=61 Identities=8% Similarity=0.098 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 006573 279 VFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQMLA 339 (640)
Q Consensus 279 ~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~~ 339 (640)
+...+..++..+..++++-.+.+..-+.....++.+=.-+++++-.|+..=+|+++.|.++
T Consensus 178 ~~~~~~~l~~~~~~~~~via~~D~~~qr~~~~k~lkMskqEvKdE~Ke~EGdP~iK~r~R~ 238 (342)
T TIGR01404 178 VGELLKLLILVCLGFFLVVGLADFAFQRYLFMKDLKMSKDEVKREYKEQEGDPEIKSKRRE 238 (342)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 3444444444444444444445554444333333333344555555555555555555443
No 210
>KOG3713 consensus Voltage-gated K+ channel KCNB/KCNC [Inorganic ion transport and metabolism]
Probab=30.39 E-value=1.6e+02 Score=31.31 Aligned_cols=8 Identities=38% Similarity=0.929 Sum_probs=4.2
Q ss_pred hHHHHHHH
Q 006573 63 RYRVWETY 70 (640)
Q Consensus 63 ~~~~w~~~ 70 (640)
.++.|+++
T Consensus 175 r~rlW~~~ 182 (477)
T KOG3713|consen 175 RRRLWALL 182 (477)
T ss_pred HHHHHHHh
Confidence 34567643
No 211
>PF06052 3-HAO: 3-hydroxyanthranilic acid dioxygenase; InterPro: IPR010329 Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase (1.13.11.6 from EC). It is part of the kynurenine pathway for the degradation of tryptophan and the biosynthesis of nicotinic acid [].The prokaryotic homologue is involved in the 2-nitrobenzoate degradation pathway []. The enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.; GO: 0000334 3-hydroxyanthranilate 3,4-dioxygenase activity, 0005506 iron ion binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 1ZVF_A 1YFX_A 1YFW_A 1YFY_A 1YFU_A 2QNK_A 3FE5_A.
Probab=30.30 E-value=2.9e+02 Score=24.41 Aligned_cols=58 Identities=17% Similarity=0.175 Sum_probs=33.5
Q ss_pred CCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccceEEEEeeHH
Q 006573 416 APTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLLRLNRT 479 (640)
Q Consensus 416 ~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~~i~~~ 479 (640)
+.+++|+-++|...+...++|+.. -..+.+|++|= +... -+.+-+--.+|.-+++.+.
T Consensus 52 e~eE~FyQ~kG~m~Lkv~e~g~~k-di~I~EGe~fL----LP~~-vpHsP~R~~~tiGLViEr~ 109 (151)
T PF06052_consen 52 ETEEFFYQLKGDMCLKVVEDGKFK-DIPIREGEMFL----LPAN-VPHSPQRPADTIGLVIERK 109 (151)
T ss_dssp SS-EEEEEEES-EEEEEEETTEEE-EEEE-TTEEEE----E-TT---EEEEE-TT-EEEEEEE-
T ss_pred CcceEEEEEeCcEEEEEEeCCceE-EEEeCCCcEEe----cCCC-CCCCCcCCCCcEEEEEEec
Confidence 456899999999988776677654 45889998873 3322 2233333467777777764
No 212
>TIGR00933 2a38 potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system.
Probab=30.15 E-value=1.7e+02 Score=30.72 Aligned_cols=42 Identities=24% Similarity=0.396 Sum_probs=31.4
Q ss_pred HHHHHHHHhhhhhhcccccC--CcccCCchhhHHHHHHHHHHHH
Q 006573 249 IRYVTSMYWSITTLTTVGYG--DLHPVNTREMVFDILFMLFNLG 290 (640)
Q Consensus 249 ~~y~~s~yw~~~t~ttvGyg--d~~p~t~~e~~~~i~~~i~g~~ 290 (640)
.....+.+.++++++|.|+. |..-.++..+++.++.|++|..
T Consensus 230 ~~~~~~~f~~~s~~~T~Gfst~d~~~~~~~~~lll~~lMfIGg~ 273 (390)
T TIGR00933 230 GALLLSAFFQSSTLRTAGFSTIDFAALPTATLVLLLLLMFIGGC 273 (390)
T ss_pred HHHHHHHHHHHhhccCCCccccChhhcCHHHHHHHHHHHHHcCC
Confidence 45677889999999999996 3344455677888888888754
No 213
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=28.84 E-value=1.2e+02 Score=31.56 Aligned_cols=50 Identities=12% Similarity=0.229 Sum_probs=33.4
Q ss_pred cccccCCCeEEEeCCCCCeEEEEEeceEEEEEee-CCceEEEEEecCCCeee
Q 006573 401 AEYFPPKEDVILQNEAPTDFYILVTGAVDLLVLK-NGVEQVVGEAKTGEICG 451 (640)
Q Consensus 401 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~~~-~g~~~~~~~l~~G~~fG 451 (640)
...+.||...-..--...++.++++|++++...+ +|+ .....+++||++=
T Consensus 71 ~~~l~pG~~~~~HwH~~~E~~yVl~G~~~v~~~d~~g~-~~~~~L~~GD~~~ 121 (367)
T TIGR03404 71 NMRLEPGAIRELHWHKEAEWAYVLYGSCRITAVDENGR-NYIDDVGAGDLWY 121 (367)
T ss_pred EEEEcCCCCCCcccCCCceEEEEEeeEEEEEEEcCCCc-EEEeEECCCCEEE
Confidence 3456677654332234567999999999997743 343 3445899999873
No 214
>PRK11171 hypothetical protein; Provisional
Probab=28.84 E-value=1.9e+02 Score=28.46 Aligned_cols=70 Identities=10% Similarity=0.049 Sum_probs=44.4
Q ss_pred ccccccCCCeEEEeCC--CCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccceEEEEee
Q 006573 400 KAEYFPPKEDVILQNE--APTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLLRLN 477 (640)
Q Consensus 400 ~~~~~~~ge~i~~~g~--~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~~i~ 477 (640)
....++||...-.... ..+++++|++|.+++.. +|+ ...+.+||.+= +-.+.+........+.++++.+.
T Consensus 64 ~~~~l~PG~~~~~~~h~~~~eE~~~VlsG~l~v~~--~g~---~~~L~~GDsi~---~p~~~~H~~~N~g~~~a~~l~v~ 135 (266)
T PRK11171 64 YLVEVEPGGGSDQPEPDEGAETFLFVVEGEITLTL--EGK---THALSEGGYAY---LPPGSDWTLRNAGAEDARFHWIR 135 (266)
T ss_pred EEEEECCCCcCCCCCCCCCceEEEEEEeCEEEEEE--CCE---EEEECCCCEEE---ECCCCCEEEEECCCCCEEEEEEE
Confidence 4456777764332222 24689999999999976 443 45889999763 22345555555556677777664
No 215
>PRK12772 bifunctional flagellar biosynthesis protein FliR/FlhB; Provisional
Probab=28.51 E-value=6.1e+02 Score=28.47 Aligned_cols=61 Identities=10% Similarity=0.090 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 006573 279 VFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQMLA 339 (640)
Q Consensus 279 ~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~~ 339 (640)
+...+..++..+..++++-.+.+..-+..+..++.+=.-+++++-.|+.+=+|+++.|.|+
T Consensus 442 ~~~~~~~l~~~~~~~~~via~~D~~~q~~~~~k~lkMskqEvK~E~Ke~EGdP~iK~r~R~ 502 (609)
T PRK12772 442 LKSLVISIFFRITLIMIIIAVADYVYQKYQYNKDLRMTKQEVKEEYKQDEGDPQIKAKIKQ 502 (609)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCHHHHHHHHH
Confidence 3334444444444444454455555444444444443445555656666666666555543
No 216
>PF00190 Cupin_1: Cupin; InterPro: IPR006045 This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant. ; GO: 0045735 nutrient reservoir activity; PDB: 2E9Q_A 2EVX_A 1OD5_A 1UCX_A 1UD1_C 1FXZ_C 3KGL_C 3KSC_D 1UIJ_F 1IPK_B ....
Probab=27.93 E-value=1.5e+02 Score=25.80 Aligned_cols=51 Identities=12% Similarity=0.117 Sum_probs=34.4
Q ss_pred cccccCCCeEEEeCCCCCeEEEEEeceEEEEE-eeCC----ceEEEE--EecCCCeee
Q 006573 401 AEYFPPKEDVILQNEAPTDFYILVTGAVDLLV-LKNG----VEQVVG--EAKTGEICG 451 (640)
Q Consensus 401 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~v~~-~~~g----~~~~~~--~l~~G~~fG 451 (640)
.....||....-.-..+..+.+|.+|+..+.. .+++ ...... .+++||+|-
T Consensus 38 ~~~i~pg~~~~Ph~h~a~~i~~V~~G~~~~~~v~~~~~~~~~~~~~~~v~l~~Gdv~~ 95 (144)
T PF00190_consen 38 RVLIEPGGLRAPHYHNADEIVYVIEGRGRVGVVGPGGPQEEFRDFSQKVRLKAGDVFV 95 (144)
T ss_dssp EEEEETTEEEEEEEESSEEEEEEEESEEEEEEEETTCSSSEEEEEEEEEEEETTEEEE
T ss_pred eeehhcCCccceeEeeeeEEeeeeccceEEEEEecCCccccceeeeceeeeeccccee
Confidence 34457887766654488999999999998754 3333 112222 599999884
No 217
>TIGR00934 2a38euk potassium uptake protein, Trk family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.
Probab=27.60 E-value=4.2e+02 Score=30.47 Aligned_cols=87 Identities=11% Similarity=0.211 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCccCcchHHHHHHHHHhhhhhhcccccCCcccCCc-----
Q 006573 201 CCKLIFVTLFAVHCAGCFYYLLAARYHNPERTWIGASLGQNFLEKSLWIRYVTSMYWSITTLTTVGYGDLHPVNT----- 275 (640)
Q Consensus 201 l~~l~~~~~~~~h~~ac~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~y~~s~yw~~~t~ttvGygd~~p~t~----- 275 (640)
+.+++..+++++|+++++....-.... ..|- +.-...-......|+|-++++.+..|+ +..|.+.
T Consensus 451 L~~Iv~~Y~~~~~llG~i~l~~wi~~~---~~~~------~~l~~~gin~~W~aiFhAVSAFnNAGF-sL~~dSM~~F~~ 520 (800)
T TIGR00934 451 LCSIVLVYFLGFNILGFVLLLPWINHV---KTYS------EVVRSKGVSPTWWGFFTAMSAFANLGL-TLTPESMVSFNK 520 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC---ccHH------HHHhhcCccHHHHHHHHHHHHHhcCCC-CcCCCcchhhcc
Confidence 556677778889998887764432110 1110 011111223445677888889998887 4445333
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHH
Q 006573 276 --REMVFDILFMLFNLGLTAYLIG 297 (640)
Q Consensus 276 --~e~~~~i~~~i~g~~~~a~~i~ 297 (640)
.=.+..++.+++|-+-|..+.-
T Consensus 521 ~~~vllvm~~LIi~GntGFPVllr 544 (800)
T TIGR00934 521 NSYLLLLMIWFIIIGNTGFPIFLR 544 (800)
T ss_pred CccHHHHHHHHHHHcccchHHHHH
Confidence 2223344444555444444433
No 218
>KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription]
Probab=27.24 E-value=58 Score=26.11 Aligned_cols=23 Identities=17% Similarity=0.283 Sum_probs=19.8
Q ss_pred HhCCCCHHHHHHHHHHHHhhhcc
Q 006573 325 QRNQLPIRLQDQMLAHLCLKFRT 347 (640)
Q Consensus 325 ~~~~l~~~l~~rv~~y~~~~~~~ 347 (640)
..+++|..+.++|..|+.|+.+.
T Consensus 61 ~f~di~shiLeKvc~Yl~Yk~rY 83 (112)
T KOG3473|consen 61 YFRDIPSHILEKVCEYLAYKVRY 83 (112)
T ss_pred EeccchHHHHHHHHHHhhheeee
Confidence 34788999999999999998876
No 219
>COG3817 Predicted membrane protein [Function unknown]
Probab=27.01 E-value=1.1e+02 Score=29.52 Aligned_cols=36 Identities=28% Similarity=0.573 Sum_probs=26.1
Q ss_pred CcchHHHHHHHHHhhhhhhcccccCCcccCCchhhHH
Q 006573 244 EKSLWIRYVTSMYWSITTLTTVGYGDLHPVNTREMVF 280 (640)
Q Consensus 244 ~~~~~~~y~~s~yw~~~t~ttvGygd~~p~t~~e~~~ 280 (640)
+.+...++.++++|+.-.+|-+| ||..|.-..+.++
T Consensus 26 dktnp~r~~t~~FW~l~~~tFl~-g~~lp~~viG~iv 61 (313)
T COG3817 26 DKTNPVRFGTGLFWGLFSLTFLG-GDRLPNIVIGLIV 61 (313)
T ss_pred ccCCCceecchHHHHHHHHHHhc-cccccchhHhHHH
Confidence 33345677899999999999999 8887765444433
No 220
>PRK07668 hypothetical protein; Validated
Probab=26.34 E-value=1.9e+02 Score=28.25 Aligned_cols=60 Identities=8% Similarity=0.127 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHH-HHHhhhcccccCcchHHHHhhhhHHHHhHHHH
Q 006573 312 KFRDTIQAASSFAQRNQLPIRLQDQMLA-HLCLKFRTDSEGLQQQETLDSLPKAIRSSISH 371 (640)
Q Consensus 312 ~~~~~~~~~~~~~~~~~l~~~l~~rv~~-y~~~~~~~~~~~~~~~~~l~~lp~~lr~~i~~ 371 (640)
+-++=+.++..|++.++++++-++.+.. +...-.+.+++|.+.++++.+=|++.-+|+..
T Consensus 5 eNeefl~~L~~yL~~~glseeeieeiL~Ei~~hLlEgQk~GkTA~~IfG~sPk~yA~EL~~ 65 (254)
T PRK07668 5 EGRKFLDDTRVYLIAKGIKEEDIESFLEDAELHLIEGEKDGKTVEDIFGDSPKEYANELVK 65 (254)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCHHHHHHHHhc
Confidence 4455567788899999999887777554 44444555678999999999866665555444
No 221
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=25.66 E-value=1.4e+02 Score=30.97 Aligned_cols=73 Identities=10% Similarity=0.122 Sum_probs=43.6
Q ss_pred cccccccCCCeEEEe-CCCCCeEEEEEeceEEEEEe-eCCceEEEEEecCCCeeechhhhc-CCCeeeEEEEccceEEEE
Q 006573 399 MKAEYFPPKEDVILQ-NEAPTDFYILVTGAVDLLVL-KNGVEQVVGEAKTGEICGEIGVLC-YRPQLFTVRTKRLSQLLR 475 (640)
Q Consensus 399 ~~~~~~~~ge~i~~~-g~~~~~ly~I~~G~v~v~~~-~~g~~~~~~~l~~G~~fGe~~l~~-~~~~~~~~~a~~~~~v~~ 475 (640)
+....++||...-.. -...+++++|++|++++... .+|+.. ...+++||++= +. +.+....-.-.++++++.
T Consensus 247 ~~~~~l~PG~~~~~H~H~~~~E~~yvl~G~~~~~v~d~~g~~~-~~~l~~GD~~~----iP~g~~H~i~N~G~e~l~fL~ 321 (367)
T TIGR03404 247 AAIVTVEPGAMRELHWHPNADEWQYFIQGQARMTVFAAGGNAR-TFDYQAGDVGY----VPRNMGHYVENTGDETLVFLE 321 (367)
T ss_pred EEEEEECCCCccCCeeCcCCCeEEEEEEEEEEEEEEecCCcEE-EEEECCCCEEE----ECCCCeEEEEECCCCCEEEEE
Confidence 445567787765443 33467899999999999763 344433 35799999652 22 232222222345666666
Q ss_pred e
Q 006573 476 L 476 (640)
Q Consensus 476 i 476 (640)
+
T Consensus 322 i 322 (367)
T TIGR03404 322 V 322 (367)
T ss_pred E
Confidence 5
No 222
>PRK12773 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=25.23 E-value=7.1e+02 Score=27.77 Aligned_cols=60 Identities=15% Similarity=0.081 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 006573 279 VFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPIRLQDQML 338 (640)
Q Consensus 279 ~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~rv~ 338 (640)
+...+..++..+..++++-.+.+..-+.....++.+=..+++++-.|+..=+|+++.|.+
T Consensus 477 i~~ll~~Lvl~vllvllVIAiiD~~~QR~~f~KkLKMSKQEVKdE~KEsEGDPeIKaRRR 536 (646)
T PRK12773 477 VMNSSFKIFLIVGIILLAISIVDYLYQRYEYEESLKMTPSEAKREAKESDGDRSLQARRR 536 (646)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhccCCHHHHHHHH
Confidence 444444444444444444444444433333332222233444444444444444444443
No 223
>smart00513 SAP Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation.
Probab=23.70 E-value=1.3e+02 Score=18.89 Aligned_cols=24 Identities=17% Similarity=0.277 Sum_probs=17.4
Q ss_pred HHHHHHHHHhCCCC-----HHHHHHHHHH
Q 006573 317 IQAASSFAQRNQLP-----IRLQDQMLAH 340 (640)
Q Consensus 317 ~~~~~~~~~~~~l~-----~~l~~rv~~y 340 (640)
..++.+.++..++| .+|++|+.+|
T Consensus 6 ~~~Lk~~l~~~gl~~~G~K~~Lv~Rl~~~ 34 (35)
T smart00513 6 VSELKDELKKRGLSTSGTKAELVDRLLEA 34 (35)
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHh
Confidence 45677888888887 4677777765
No 224
>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional
Probab=23.26 E-value=2.9e+02 Score=25.28 Aligned_cols=53 Identities=13% Similarity=0.184 Sum_probs=35.3
Q ss_pred CCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeechhhhcCCCeeeEEEEccceEEEEe
Q 006573 416 APTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLCYRPQLFTVRTKRLSQLLRL 476 (640)
Q Consensus 416 ~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~a~~~~~v~~i 476 (640)
..+++.+|++|.+.+.. +|+ ...+.+||.+=-- .+.|+.+.....++++++.+
T Consensus 127 ~~~E~~~Vl~G~~~~~~--~~~---~~~l~~Gd~~~~~---~~~~H~~~n~~~~~~~~l~~ 179 (185)
T PRK09943 127 QGEEIGTVLEGEIVLTI--NGQ---DYHLVAGQSYAIN---TGIPHSFSNTSAGICRIISA 179 (185)
T ss_pred CCcEEEEEEEeEEEEEE--CCE---EEEecCCCEEEEc---CCCCeeeeCCCCCCeEEEEE
Confidence 45689999999999876 443 3478999976322 24555555555566666655
No 225
>PF03891 DUF333: Domain of unknown function (DUF333); InterPro: IPR005590 This family consists of bacterial proteins whose function has not been characterised.
Probab=23.25 E-value=1.7e+02 Score=20.47 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=28.0
Q ss_pred eceEEEEEeeCCceEEEEEecCCCeeechhhhcC
Q 006573 425 TGAVDLLVLKNGVEQVVGEAKTGEICGEIGVLCY 458 (640)
Q Consensus 425 ~G~v~v~~~~~g~~~~~~~l~~G~~fGe~~l~~~ 458 (640)
-|+.++..+.+|.+.-++.+..|....|-+++.+
T Consensus 15 GG~~~~~~~~~G~~~g~C~lpdG~~~~eW~l~r~ 48 (50)
T PF03891_consen 15 GGKLEIRKQPDGSQVGYCVLPDGRRCEEWALYRG 48 (50)
T ss_pred CCEEEEEEcCCCCeEeEEECCCCCEEeHHHHhhc
Confidence 4688887777887778999999999999888765
No 226
>COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=23.16 E-value=1.4e+02 Score=26.47 Aligned_cols=47 Identities=19% Similarity=0.250 Sum_probs=31.8
Q ss_pred ccccCCC--eEEEeCCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeeech
Q 006573 402 EYFPPKE--DVILQNEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICGEI 453 (640)
Q Consensus 402 ~~~~~ge--~i~~~g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fGe~ 453 (640)
..++||. ....--...++++.|++|+..+.. ++. ...+.|||+.|.-
T Consensus 47 ~~v~PG~~Ss~~H~Hs~edEfv~ILeGE~~l~~--d~~---e~~lrpGD~~gFp 95 (161)
T COG3837 47 EIVEPGGESSLRHWHSAEDEFVYILEGEGTLRE--DGG---ETRLRPGDSAGFP 95 (161)
T ss_pred EEeCCCCccccccccccCceEEEEEcCceEEEE--CCe---eEEecCCceeecc
Confidence 3445542 234444567889999999998765 343 3488999998854
No 227
>COG1422 Predicted membrane protein [Function unknown]
Probab=22.99 E-value=3e+02 Score=25.60 Aligned_cols=39 Identities=5% Similarity=0.105 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHhh---chhhHHHHHHHHHHHHHHHh
Q 006573 288 NLGLTAYLIGNMTNLVVHG---TSRTRKFRDTIQAASSFAQR 326 (640)
Q Consensus 288 g~~~~a~~i~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 326 (640)
++++.|.++|.+.+++... .++-+++++.+++.++.+++
T Consensus 49 vilV~avi~gl~~~i~~~~liD~ekm~~~qk~m~efq~e~~e 90 (201)
T COG1422 49 VILVAAVITGLYITILQKLLIDQEKMKELQKMMKEFQKEFRE 90 (201)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555432 24445677777777776654
No 228
>COG5559 Uncharacterized conserved small protein [Function unknown]
Probab=22.96 E-value=78 Score=22.64 Aligned_cols=19 Identities=21% Similarity=0.578 Sum_probs=15.6
Q ss_pred HHHHhhhhHHHHhHHHHhh
Q 006573 355 QETLDSLPKAIRSSISHYL 373 (640)
Q Consensus 355 ~~~l~~lp~~lr~~i~~~~ 373 (640)
-+++++||..|+.++..++
T Consensus 5 yelfqkLPDdLKrEvldY~ 23 (65)
T COG5559 5 YELFQKLPDDLKREVLDYI 23 (65)
T ss_pred HHHHHHCcHHHHHHHHHHH
Confidence 3688999999999987654
No 229
>PRK11171 hypothetical protein; Provisional
Probab=22.04 E-value=1.9e+02 Score=28.47 Aligned_cols=49 Identities=12% Similarity=0.104 Sum_probs=37.3
Q ss_pred ccccccccCCCeEEEe-CCCCCeEEEEEeceEEEEEeeCCceEEEEEecCCCeee
Q 006573 398 EMKAEYFPPKEDVILQ-NEAPTDFYILVTGAVDLLVLKNGVEQVVGEAKTGEICG 451 (640)
Q Consensus 398 ~~~~~~~~~ge~i~~~-g~~~~~ly~I~~G~v~v~~~~~g~~~~~~~l~~G~~fG 451 (640)
.+....++||..+-.. .....+.++|++|+..+.. +|+ ...+.+||++-
T Consensus 185 ~~~~~~l~PG~~~~~~~~~~~ee~i~Vl~G~~~~~~--~~~---~~~l~~GD~i~ 234 (266)
T PRK11171 185 HVNIVTFEPGASIPFVETHVMEHGLYVLEGKGVYRL--NND---WVEVEAGDFIW 234 (266)
T ss_pred EEEEEEECCCCEEccCcCCCceEEEEEEeCEEEEEE--CCE---EEEeCCCCEEE
Confidence 4556789999888763 5666789999999998865 453 45889999763
No 230
>PRK10750 potassium transporter; Provisional
Probab=22.01 E-value=2.1e+02 Score=30.97 Aligned_cols=46 Identities=11% Similarity=-0.004 Sum_probs=31.6
Q ss_pred chHHHHHHHHHhhhhhhcccccCCc--ccCCchhhHHHHHHHHHHHHH
Q 006573 246 SLWIRYVTSMYWSITTLTTVGYGDL--HPVNTREMVFDILFMLFNLGL 291 (640)
Q Consensus 246 ~~~~~y~~s~yw~~~t~ttvGygd~--~p~t~~e~~~~i~~~i~g~~~ 291 (640)
+..+...+|++-+++.+||.||... .-.+..-+++.++.|++|-..
T Consensus 300 ~~~~~l~~s~Fq~vS~~tTtGF~t~d~~~w~~~~~~ll~~lMfIGG~~ 347 (483)
T PRK10750 300 SALMTLNQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCA 347 (483)
T ss_pred CHHHHHHHHHHeeeecccCCCCCCCChhhccHHHHHHHHHHHHHcCCc
Confidence 4456788899888888999999643 223334566667777776543
No 231
>KOG4069 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.26 E-value=2.7e+02 Score=23.59 Aligned_cols=42 Identities=14% Similarity=0.191 Sum_probs=27.6
Q ss_pred cccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHhCC
Q 006573 270 LHPVNTREMVFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQ 328 (640)
Q Consensus 270 ~~p~t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (640)
+.|.|..|-.++++.+-. +=.+ ....|+++++.+++|+.+.+
T Consensus 77 ~~~qty~EgclgC~TaY~--------iy~c---------tethYek~L~klskfl~~qN 118 (154)
T KOG4069|consen 77 ITPQTYFEGCLGCFTAYA--------IYAC---------TETHYEKKLDKLSKFLNRQN 118 (154)
T ss_pred cCCcchHHHHHHHHHHHH--------HHHH---------HHHHHHHHHHHHHHHHHhhh
Confidence 567887777666544332 1111 24689999999999987654
No 232
>smart00511 ORANGE Orange domain. This domain confers specificity among members of the Hairy/E(SPL) family.
Probab=20.84 E-value=2.6e+02 Score=18.74 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHhhh
Q 006573 311 RKFRDTIQAASSFAQRN-QLPIRLQDQMLAHLCLKF 345 (640)
Q Consensus 311 ~~~~~~~~~~~~~~~~~-~l~~~l~~rv~~y~~~~~ 345 (640)
.-|.+-+.++.+||... .+++.++.|+.+++....
T Consensus 5 ~Gy~~C~~Ev~~fLs~~~~~~~~~~~~Ll~HL~~~~ 40 (45)
T smart00511 5 SGYRECANEVSRFLSQLPGTDPDVRARLLSHLQTHL 40 (45)
T ss_pred HHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHH
Confidence 45888999999999864 678999999999987543
No 233
>KOG3300 consensus NADH:ubiquinone oxidoreductase, B16.6 subunit/cell death-regulatory protein [Energy production and conversion; Cell cycle control, cell division, chromosome partitioning]
Probab=20.69 E-value=2.8e+02 Score=23.69 Aligned_cols=46 Identities=17% Similarity=0.199 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHhhhcccccCcchHHHHhhhhH
Q 006573 316 TIQAASSFAQRNQLPIRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPK 363 (640)
Q Consensus 316 ~~~~~~~~~~~~~l~~~l~~rv~~y~~~~~~~~~~~~~~~~~l~~lp~ 363 (640)
+-..++.|--++-+-+-||..-.+++...+++ +-..|.+++++.|.
T Consensus 61 rr~kiEd~~a~nai~PiL~AErDr~~l~~lrk--n~eeEaeiMKdVPg 106 (146)
T KOG3300|consen 61 RRLKIEDYAARNAILPILQAERDRRFLSELRK--NLEEEAEIMKDVPG 106 (146)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH--hHHHHHHHHccCCC
Confidence 33445566666666677776666666556654 23345567776663
No 234
>PF02386 TrkH: Cation transport protein; InterPro: IPR003445 This family consists of various potassium transport proteins (Trk) and V-type sodium ATP synthase subunit J or translocating ATPase J (3.6.1.34 from EC). These proteins are involved in active sodium up-take utilizing ATP in the process. TrkH from Escherichia coli is a hydrophobic membrane protein and determines the specificity and kinetics of cation transport by the TrK system in this organism []. This protein interacts with TrkA and requires TrkE for transport activity.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport; PDB: 3PJZ_A.
Probab=20.36 E-value=3.5e+02 Score=27.86 Aligned_cols=40 Identities=20% Similarity=0.336 Sum_probs=26.3
Q ss_pred HHHHHHhhhhhhcccccC--Cccc-CCch---hhHHHHHHHHHHHH
Q 006573 251 YVTSMYWSITTLTTVGYG--DLHP-VNTR---EMVFDILFMLFNLG 290 (640)
Q Consensus 251 y~~s~yw~~~t~ttvGyg--d~~p-~t~~---e~~~~i~~~i~g~~ 290 (640)
+.++++=+++.++|+|.+ ..+| .+.. .|++.++.|++|=+
T Consensus 295 ~~~~lfe~~Sa~gtvGls~G~~~~~~s~~~~~~K~vli~~M~~GRl 340 (354)
T PF02386_consen 295 FFDALFEVISAFGTVGLSLGITTPNLSFSGPFSKLVLIFLMLLGRL 340 (354)
T ss_dssp -HHHHHHHHHHCTT--S--SSS----SSS-HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCcCCCCCCCCCCccchhhHHHHHHHHHHHHhCc
Confidence 678899999999999864 3122 3334 99999999999853
No 235
>PF07527 Hairy_orange: Hairy Orange; InterPro: IPR003650 This domain confers specificity among members of the Hairy/E(SPL) family. HES-2 (hairy and enhancer of split 2) is a transcription factor, and the hairy protein is a pair-rule protein that regulates embryonic segmentation and adult bristle patterning. These proteins are transcriptional repressors of genes that require the BHLH protein for their transcription.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2DB7_A.
Probab=20.12 E-value=2.8e+02 Score=18.44 Aligned_cols=34 Identities=15% Similarity=0.284 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHh
Q 006573 310 TRKFRDTIQAASSFAQRN-QLPIRLQDQMLAHLCL 343 (640)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~-~l~~~l~~rv~~y~~~ 343 (640)
..-|.+-+.++.+||... ++++.++.|+.+++..
T Consensus 4 ~~Gy~~C~~Ev~~fL~~~~~~~~~~~~rLl~HL~~ 38 (43)
T PF07527_consen 4 RAGYSECLNEVSRFLSSVEGVDPGVRARLLSHLQS 38 (43)
T ss_dssp HHHHHHHHHHHHHHHHHTS---THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHH
Confidence 345888899999998664 4678999999988864
No 236
>PHA01757 hypothetical protein
Probab=20.01 E-value=4.1e+02 Score=20.40 Aligned_cols=45 Identities=18% Similarity=0.269 Sum_probs=29.6
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHH
Q 006573 274 NTREMVFDILFMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQA 319 (640)
Q Consensus 274 t~~e~~~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~ 319 (640)
+..|-.+--|+...|.+.-.+++|.+.-+.... .+++.|.+-++.
T Consensus 4 ~l~e~al~gf~a~~g~l~~~fii~e~~hlynek-~~nenf~~AvD~ 48 (98)
T PHA01757 4 TLLEGALYGFFAVTGALSASFIIGEIVHLYNEK-QRNENFAKAIDQ 48 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-hhhHhHHHHHHH
Confidence 445666667888889988889999888765433 333445544443
Done!