BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006578
(640 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P2D6|F135A_HUMAN Protein FAM135A OS=Homo sapiens GN=FAM135A PE=2 SV=2
Length = 1515
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 531 IVVFVHGFQGHHLDLRLVRNQWLLIDP--KIEFLMSEVNEDKTYGDFREMGQRLAEEVIS 588
++V VHG G+ DLRLV+ L P +I+FLMSE N++ T+ DF M RL +E+I
Sbjct: 1250 LIVCVHGLDGNSADLRLVKTYIELGLPGGRIDFLMSERNQNDTFADFDSMTDRLLDEIIQ 1309
Query: 589 FVKRKMDKASRSGNLRDIMLSFVGHSIGNIIIRAALA 625
+++ S+ +SF+GHS+GN+IIR+ L
Sbjct: 1310 YIQIYSLTVSK--------ISFIGHSLGNLIIRSVLT 1338
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 60 LDAVQEIAIYIHRFHNLDLFQQGWYQIKITLRWEDSEYSSSAVGTPARVV-QYEAPQLGF 118
+ A+ E ++ +++F+N+DLFQ+G+YQI+ +++ P+R+ + EA L
Sbjct: 4 VQAMVEFSVELNKFYNVDLFQRGFYQIRASMK------------IPSRIPHRVEASLLHA 51
Query: 119 DDFSGVWRIDDAENSFSTQPFRIKYARQDVHLSVMIAFNLYV-----SKYEVLSTSAVIL 173
+ + ++ ++ F+I Y ++V L+ ++ F + + E L +L
Sbjct: 52 TGMTLAFPASVHDSLICSKTFQILYKNEEVVLNDVMIFKVKMLLDERKIEETLEEMNFLL 111
Query: 174 KFELMYASVLENSPDLQSSLDACPAAVHEFRIPPKALLGLHSYCPVHFDSLHAVLVDVSV 233
+L + ++ DL ++L + + P GLH + V FD H +V V+V
Sbjct: 112 SLDLHFTDGDYSADDL-NALQLISSRTLKLHFSPHR--GLHHHVNVMFDYFHLSVVSVTV 168
Query: 234 HVSLL 238
H SL+
Sbjct: 169 HASLV 173
>sp|Q5RA75|F135A_PONAB Protein FAM135A OS=Pongo abelii GN=FAM135A PE=2 SV=1
Length = 1095
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 531 IVVFVHGFQGHHLDLRLVRNQWLLIDP--KIEFLMSEVNEDKTYGDFREMGQRLAEEVIS 588
++V VHG G+ DLRLV+ L P +I+FLMSE N++ T+ DF M RL +E+I
Sbjct: 830 LIVCVHGLDGNSADLRLVKTYIELGLPGGRIDFLMSERNQNDTFADFDSMTDRLLDEIIQ 889
Query: 589 FVKRKMDKASRSGNLRDIMLSFVGHSIGNIIIRAALA 625
+++ S+ +SF+GHS+GN+IIR+ L
Sbjct: 890 YIQIYSLTVSK--------ISFIGHSLGNLIIRSVLT 918
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 60 LDAVQEIAIYIHRFHNLDLFQQGWYQIKITLRWEDSEYSSSAVGTPARVV-QYEAPQLGF 118
+ A+ E ++ +++F+N+DLFQ+G+YQI+ S++ P+R+ + EA L
Sbjct: 4 VQAMVEFSVELNKFYNVDLFQRGFYQIR------------SSMKIPSRIPHRVEASLLHA 51
Query: 119 DDFSGVWRIDDAENSFSTQPFRIKYARQDVHLSVMIAFNLYV-----SKYEVLSTSAVIL 173
+ + ++ ++ F+I Y ++V L+ ++ F + + E L +L
Sbjct: 52 TGMTLAFPASVHDSLICSKTFQILYKNEEVVLNDVMIFKVKMLLDERKIEETLEEMNFLL 111
Query: 174 KFELMYASVLENSPDLQSSLDACPAAVHEFRIPPKALLGLHSYCPVHFDSLHAVLVDVSV 233
+L + ++ DL ++L + + P GLH + V FD H +V V+V
Sbjct: 112 SLDLHFTDGDYSADDL-NALQLISSRTLKLHFSPHR--GLHHHVNVMFDYFHLSVVSVTV 168
Query: 234 HVSLL 238
H SL+
Sbjct: 169 HASLV 173
>sp|Q9DAI6|F135B_MOUSE Protein FAM135B OS=Mus musculus GN=Fam135b PE=2 SV=3
Length = 1403
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 529 LKIVVFVHGFQGHHLDLRLVRNQWLLIDP--KIEFLMSEVNEDKTYGDFREMGQRLAEEV 586
+ +VV VHG G+ DLRLV+ L P K++FLMSE N+ T+ DF M RL +E+
Sbjct: 1136 IHLVVCVHGLDGNSADLRLVKTFIELGLPGGKLDFLMSEKNQTDTFADFDTMTDRLLDEI 1195
Query: 587 ISFVKRKMDKASRSGNLRDIMLSFVGHSIGNIIIRAALA 625
I ++ NL +SF+GHS+GNIIIR+ L
Sbjct: 1196 IQHIQLY--------NLSISRISFIGHSLGNIIIRSVLT 1226
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 91/181 (50%), Gaps = 23/181 (12%)
Query: 65 EIAIYIHRFHNLDLFQQGWYQIKITLRWEDSEYSSSAVGTPARVVQYEAPQLGFDDFSGV 124
E ++ +H+F+N+DLFQ+G+YQI++TL+ SS + P R+ A +G + S +
Sbjct: 9 EFSVELHKFYNVDLFQRGYYQIRVTLKV------SSRI--PHRL---SASIVGQSESSSL 57
Query: 125 WRIDDAENSFSTQPFRIKYARQDVHLSVMIAFNLYV-----SKYEVLSTSAVILKFELMY 179
E++ ++ F+I Y ++V ++ + F +++ + LS LK +L +
Sbjct: 58 HSACVHESAVHSRVFQILYRNEEVSINDAMLFRVHLLLDGERVEDALSEVEFQLKVDLHF 117
Query: 180 ASVLENSPDLQSS--LDACPAAVHEFRIPPKALLGLHSYCPVHFDSLHAVLVDVSVHVSL 237
+ D+ + + + +H P+ GLH PV FD H ++ V++H +L
Sbjct: 118 TDSEQQLRDVTGTPMISSRTLGLH---FHPRR--GLHHQVPVMFDYFHLSVISVAIHAAL 172
Query: 238 L 238
+
Sbjct: 173 V 173
>sp|Q6NS59|F135A_MOUSE Protein FAM135A OS=Mus musculus GN=Fam135a PE=2 SV=2
Length = 1506
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 10/97 (10%)
Query: 531 IVVFVHGFQGHHLDLRLVRNQWLLIDP--KIEFLMSEVNEDKTYGDFREMGQRLAEEVIS 588
++V VHG G+ DLRLV+ L P +++FLMSE N++ T+ DF M RL +E+I
Sbjct: 1241 LIVCVHGLDGNSADLRLVKTYIELGLPGGRVDFLMSERNQNDTFADFDCMTDRLLDEIIQ 1300
Query: 589 FVKRKMDKASRSGNLRDIMLSFVGHSIGNIIIRAALA 625
+++ S+ +SF+GHS+GN+IIR+ L
Sbjct: 1301 YIQIYSLTVSK--------ISFIGHSLGNLIIRSVLT 1329
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 60 LDAVQEIAIYIHRFHNLDLFQQGWYQIKITLRWEDSEYSSSAVGTPARVV-QYEAPQLGF 118
+ A+ E ++ +++F+N+DLFQ+G+YQI+ +++ PAR+ + EA L
Sbjct: 4 VQAMVEFSVELNKFYNVDLFQRGFYQIRASMK------------IPARIPHRVEASLLHA 51
Query: 119 DDFSGVWRIDDAENSFSTQPFRIKYARQDVHLSVMIAFNLYV-----SKYEVLSTSAVIL 173
+ + + ++ F+I Y ++V L+ ++ F + + E L + +L
Sbjct: 52 TGMTLAFPASVHDALVCSKTFQILYKNEEVVLNDVMIFKVKMLLDERKIEETLEEISFLL 111
Query: 174 KFELMYASVLENSPDLQSSLDACPAAVHEFRIPPKALLGLHSYCPVHFDSLHAVLVDVSV 233
L + ++ DL ++L + ++ GLH + V FD H +V V+V
Sbjct: 112 SLGLHFTDGDYSADDL-NALQLISSRT--LKLHYSICRGLHHHANVMFDYFHLSVVSVTV 168
Query: 234 HVSLL 238
H SL+
Sbjct: 169 HASLV 173
>sp|Q49AJ0|F135B_HUMAN Protein FAM135B OS=Homo sapiens GN=FAM135B PE=2 SV=2
Length = 1406
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 10/99 (10%)
Query: 529 LKIVVFVHGFQGHHLDLRLVRNQWLLIDP--KIEFLMSEVNEDKTYGDFREMGQRLAEEV 586
+ +VV VHG G+ DLRLV+ L P K++FLMSE N+ T+ DF M RL +E+
Sbjct: 1139 IHLVVCVHGLDGNSADLRLVKTFIELGLPGGKLDFLMSEKNQMDTFADFDTMTDRLLDEI 1198
Query: 587 ISFVKRKMDKASRSGNLRDIMLSFVGHSIGNIIIRAALA 625
I ++ NL +SF+GHS+GNIIIR+ L
Sbjct: 1199 IQHIQLY--------NLSISRISFIGHSLGNIIIRSVLT 1229
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 87/179 (48%), Gaps = 19/179 (10%)
Query: 65 EIAIYIHRFHNLDLFQQGWYQIKITLRWEDSEYSSSAVGTPARVVQYEAPQLGFDDFSGV 124
E ++ +H+F+N+DLFQ+G+YQI++TL+ SS + P R+ A G + S +
Sbjct: 9 EFSVELHKFYNVDLFQRGYYQIRVTLKV------SSRI--PHRL---SASIAGQTESSSL 57
Query: 125 WRIDDAENSFSTQPFRIKYARQDVHLSVMIAFNLYV-----SKYEVLSTSAVILKFELMY 179
+++ ++ F+I Y ++V ++ + F +++ + LS LK +L +
Sbjct: 58 HSACVHDSTVHSRVFQILYRNEEVPINDAVVFRVHLLLGGERMEDALSEVDFQLKVDLHF 117
Query: 180 ASVLENSPDLQSSLDACPAAVHEFRIPPKALLGLHSYCPVHFDSLHAVLVDVSVHVSLL 238
+ D+ + + P+ GLH PV FD H ++ V+VH +L+
Sbjct: 118 TDSEQQLRDVAGA-PMVSSRTLGLHFHPRN--GLHHQVPVMFDYFHLSVISVTVHAALV 173
>sp|Q641I1|F135B_XENLA Protein FAM135B OS=Xenopus laevis GN=fam135b PE=2 SV=1
Length = 1376
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 10/105 (9%)
Query: 523 QQCGRVLKIVVFVHGFQGHHLDLRLVRNQWLLIDP--KIEFLMSEVNEDKTYGDFREMGQ 580
+Q + +VV VHG G+ DLRLV+ L P ++FLMSE N+ T+ DF M
Sbjct: 1103 EQTEDGIHLVVCVHGLDGNSADLRLVKTFLELGLPGANLDFLMSEKNQTDTFADFDAMTD 1162
Query: 581 RLAEEVISFVKRKMDKASRSGNLRDIMLSFVGHSIGNIIIRAALA 625
RL +E++ ++ SR +SF+GHS+G IIIR+ L
Sbjct: 1163 RLIDEIVQHIQLYNLSISR--------ISFIGHSLGTIIIRSVLT 1199
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 19/179 (10%)
Query: 65 EIAIYIHRFHNLDLFQQGWYQIKITLRWEDSEYSSSAVGTPARVVQYEAPQLGFDDFSGV 124
E +I +H+FHN+DLFQ+G+Y ++ +L+ +SS + P R+V A +G D G
Sbjct: 9 EFSIELHKFHNVDLFQRGYYHVRASLK------ASSRI--PHRLV---ATLVGQTDDPGP 57
Query: 125 WRIDDAENSFSTQPFRIKYARQDVHLSVMIAFNLYV-----SKYEVLSTSAVILKFELMY 179
+ +N ++ F+I Y +D+ ++ ++AF +++ + LS LK +L +
Sbjct: 58 YPPCVYDNVVYSRMFQILYRNEDIDINDVMAFKVHLLLDGERVEDALSEVDFQLKLDLHF 117
Query: 180 ASVLENSPDLQSSLDACPAAVHEFRIPPKALLGLHSYCPVHFDSLHAVLVDVSVHVSLL 238
+ D+ S++ + P + GLH + PV FD H ++ V+VH SL+
Sbjct: 118 TDSEQQLKDM-SAVPLISSRTLGLYFHPTS--GLHHHVPVMFDYFHLSVISVTVHGSLI 173
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,594,583
Number of Sequences: 539616
Number of extensions: 10441445
Number of successful extensions: 109598
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 245
Number of HSP's that attempted gapping in prelim test: 81642
Number of HSP's gapped (non-prelim): 17947
length of query: 640
length of database: 191,569,459
effective HSP length: 124
effective length of query: 516
effective length of database: 124,657,075
effective search space: 64323050700
effective search space used: 64323050700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)