BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006580
(640 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LP03|PPR73_ARATH Pentatricopeptide repeat-containing protein At1g43980,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E58 PE=2
SV=1
Length = 633
Score = 632 bits (1631), Expect = e-180, Method: Compositional matrix adjust.
Identities = 309/627 (49%), Positives = 429/627 (68%), Gaps = 2/627 (0%)
Query: 1 MSSYLKKAH-VNKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDL 59
M L++AH + S Y S+L++R L KS AK +H L + GF TY GNRCL L
Sbjct: 1 MFQLLRRAHGLCMPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQL 60
Query: 60 YSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMI 119
Y + G+ + LQLFD+IP KN I+WN+CL+GL K+ L+ AL +FDE+PE DVVSWN+MI
Sbjct: 61 YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMI 120
Query: 120 SGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLSTVSSACHGKQIHGSMIRSGLSLSN 179
SG SCG+ +Y + +F MQ +RP+ FTFSIL S V+ HG+QIHG+ I SG+S N
Sbjct: 121 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYN 180
Query: 180 VVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRY 239
+V+ NS++DMY +LGV YA VFL ME+ D++SWN LI C +SG E+ALDQF+ MR
Sbjct: 181 LVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 240
Query: 240 SGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLED 299
PDEYT+S+V++ C+ LR L KGKQ AL +K+GFLSNSIVL A ID+FSKCNRL+D
Sbjct: 241 MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 300
Query: 300 SVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPI 359
SV+LF +L++WD + N MI +Y + GE AL LF L + + +RP +FT S VLSS+
Sbjct: 301 SVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA 360
Query: 360 PPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIM 419
++HG+ HS+ IK GFD + VA+SLMEMY KTGS+D + +F K D +DL+ WNT++
Sbjct: 361 VMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVI 420
Query: 420 MGLTQNGRAAETLDVFEELL-EEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYG 478
MGL +N RA E+L +F +LL + L PDR+TL +L+AC Y GFV++G+ +FS+M++ +G
Sbjct: 421 MGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHG 480
Query: 479 VMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVA 538
V PG EHYACII+LLC+ G + +A DI +PF+P IWE IL AS GD +L E VA
Sbjct: 481 VNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVA 540
Query: 539 ERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTF 598
+ M++ + S PY +L + Y M RWE V+++ M ++ + G S I I++ +++F
Sbjct: 541 KTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 600
Query: 599 NAGELQHHGGQKIYLVLRLLTWEMEDE 625
A +LQ HGG +L LL+W+ D+
Sbjct: 601 EADQLQIHGGHDTCALLDLLSWDSFDQ 627
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/650 (34%), Positives = 363/650 (55%), Gaps = 44/650 (6%)
Query: 19 SQLIDRCLSFK-SFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIP 77
++L+D C+ K S + + +H + K GF+ ++ NR +D YS+ G+ +D Q+FD++P
Sbjct: 23 AKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMP 82
Query: 78 QKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSK 137
Q+N +WN + GL K LD A +F +PE D +WNSM+SG+A + AL F+
Sbjct: 83 QRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAM 142
Query: 138 MQLQGVRPSGFTFSILLSTVS---SACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLG 194
M +G + ++F+ +LS S G Q+H S+I LS+V +G++L+DMY K G
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVH-SLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 195 VLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVIN 254
+ A VF M + +++SWNSLI+ +G ALD F M S PDE T++ VI+
Sbjct: 202 NVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVIS 261
Query: 255 ACTKLRNLDKGKQVFALSVKVGFLSNSIVLS-ATIDLFSKCNRLEDS--------VR--- 302
AC L + G++V VK L N I+LS A +D+++KC+R++++ +R
Sbjct: 262 ACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVI 321
Query: 303 --------------------LFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLRED 342
+F ++ + N +I+ Y + G E AL LF L+ RE
Sbjct: 322 AETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRES 381
Query: 343 IRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGF------DSNAVVASSLMEMYAKTG 395
+ PT ++ + +L + + + G Q H +K GF + + V +SL++MY K G
Sbjct: 382 VCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCG 441
Query: 396 SIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLL 455
++ +F K+ +RD VSWN +++G QNG E L++F E+LE G PD IT+ VL
Sbjct: 442 CVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLS 501
Query: 456 ACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGC 515
AC + GFV++G FS+M ++GV P +HY C++DLL +AG L +A + MP QP
Sbjct: 502 ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDS 561
Query: 516 SIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVM 575
IW S+L A ++ ++ L + VAE++++++ + PY LL+ YA G+WE ++ V+K M
Sbjct: 562 VIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 621
Query: 576 RKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDE 625
RK G+ K GCSWI I+ + F + H ++I+ +L +L EM E
Sbjct: 622 RKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 355 bits (910), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 219/686 (31%), Positives = 353/686 (51%), Gaps = 74/686 (10%)
Query: 15 LSYCSQLIDRCLSFKSFDF-AKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLF 73
L C+ L+ + ++ + F A+ +H + K G YL N +++YS+ G + +LF
Sbjct: 13 LELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLF 72
Query: 74 DEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALE 133
DE+P + SWN L K ++D+ + FD++P+ D VSW +MI GY + G A+
Sbjct: 73 DEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIR 132
Query: 134 MFSKMQLQGVRPSGFTFSILLSTVSSA-C--HGKQIHGSMIRSGLSLSNVVLGNSLIDMY 190
+ M +G+ P+ FT + +L++V++ C GK++H +++ GL NV + NSL++MY
Sbjct: 133 VMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR-GNVSVSNSLLNMY 191
Query: 191 GK-------------------------------LGVLYYAFGVFLNMEELDIISWNSLIS 219
K +G + A F M E DI++WNS+IS
Sbjct: 192 AKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMIS 251
Query: 220 GCFNSGYGELALDQFYSM-RYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFL 278
G GY ALD F M R S SPD +T++ V++AC L L GKQ+ + V GF
Sbjct: 252 GFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311
Query: 279 SNSIVLSATIDLFSKCNRLEDSVRLFEQ-------------------------------- 306
+ IVL+A I ++S+C +E + RL EQ
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFV 371
Query: 307 -LDRWDYAVINVMISTYGRYG-FGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPPVE- 363
L D MI Y ++G +GE A+ LF+ M+ RP +TL+ +LS
Sbjct: 372 SLKDRDVVAWTAMIVGYEQHGSYGE-AINLFRSMVGGGQRPNSYTLAAMLSVASSLASLS 430
Query: 364 HGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLD-KRDLVSWNTIMMGL 422
HG Q H A+KSG + V+++L+ MYAK G+I S++ F + +RD VSW ++++ L
Sbjct: 431 HGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIAL 490
Query: 423 TQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPG 482
Q+G A E L++FE +L EGL PD IT V AC + G V++G F MK+ ++P
Sbjct: 491 AQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPT 550
Query: 483 EEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMM 542
HYAC++DL +AG L +A + MP +P W S+L A ++ ++ L + AER++
Sbjct: 551 LSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLL 610
Query: 543 DLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGE 602
L+ + YS L Y+ G+WE +++K M+ + K G SWI +K++++ F +
Sbjct: 611 LLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVED 670
Query: 603 LQHHGGQKIYLVLRLLTWEMEDEGCV 628
H +IY+ ++ + E++ G V
Sbjct: 671 GTHPEKNEIYMTMKKIWDEIKKMGYV 696
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 342 bits (876), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 199/649 (30%), Positives = 339/649 (52%), Gaps = 39/649 (6%)
Query: 16 SYCSQLIDRCLSFKSFD---FAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQL 72
+Y S I +C+ + + + K IHG++ + T+L N + Y+ +S ++
Sbjct: 4 NYYSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRV 63
Query: 73 FDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYAL 132
FD IPQ N SWN L K+ + F+++P+ D V+WN +I GY+ G A+
Sbjct: 64 FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAV 123
Query: 133 EMFSKMQLQ-GVRPSGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLID 188
+ ++ M + T +L SS H GKQIHG +I+ G S +++G+ L+
Sbjct: 124 KAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFE-SYLLVGSPLLY 182
Query: 189 MYGKLGVLYYAFGVFLNME------------------------------ELDIISWNSLI 218
MY +G + A VF ++ E D +SW ++I
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMI 242
Query: 219 SGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFL 278
G +G + A++ F M+ G D+Y V+ AC L +++GKQ+ A ++ F
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ 302
Query: 279 SNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLM 338
+ V SA ID++ KC L + +F+++ + + M+ YG+ G E A+++F M
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Query: 339 LREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSI 397
R I P +TL +S+ + +E GSQFH AI SG V++SL+ +Y K G I
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 398 DSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLAC 457
D ST +F +++ RD VSW ++ Q GRA ET+ +F+++++ GL PD +TL V+ AC
Sbjct: 423 DDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482
Query: 458 NYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSI 517
+ G V+KG F M EYG++P HY+C+IDL ++G+L +A+ + MPF P
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIG 542
Query: 518 WESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRK 577
W ++L A G++++ + AE +++L P Y+LL+ YA +G+W+++ ++++ MR+
Sbjct: 543 WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMRE 602
Query: 578 NGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDEG 626
+ K G SWI K ++++F+A + +IY L L ++ D G
Sbjct: 603 KNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNG 651
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 211/686 (30%), Positives = 344/686 (50%), Gaps = 90/686 (13%)
Query: 25 CLSFK--SFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCI 82
CL + S A+ +HG++ GF ++ NR +D+Y + + QLFDEI + + I
Sbjct: 22 CLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKI 81
Query: 83 SWNICLRGLLKSDNLDTALKVFDEIP--EPDVVSWNSMISGYA--SCGYSDYALEMFSKM 138
+ + G S ++ A VF++ P D V +N+MI+G++ + GYS A+ +F KM
Sbjct: 82 ARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYS--AINLFCKM 139
Query: 139 QLQGVRPSGFTFSILLSTVSSACHGK----QIHGSMIRSGLSLSNVVLGNSLIDMYGKLG 194
+ +G +P FTF+ +L+ ++ + Q H + ++SG V N+L+ +Y K
Sbjct: 140 KHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSV-SNALVSVYSKCA 198
Query: 195 ----VLYYAFGVFLNMEELDIISW--------------------------------NSLI 218
+L+ A VF + E D SW N++I
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 219 SGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFL 278
SG N G+ + AL+ M SG DE+T VI AC L GKQV A ++
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 279 S----NSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVIN------------------ 316
S NS+V L+ KC + +++ +FE++ D N
Sbjct: 319 SFHFDNSLV-----SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLI 373
Query: 317 -------------VMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPPVE 363
+MIS GFGE L+LF M RE P ++ S + S +
Sbjct: 374 FKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAY 433
Query: 364 -HGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGL 422
+G Q+H+ +K GFDS+ ++L+ MYAK G ++ + ++F + D VSWN ++ L
Sbjct: 434 CNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL 493
Query: 423 TQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPG 482
Q+G AE +DV+EE+L++G+ PDRITL VL AC++ G VD+G F +M+ Y + PG
Sbjct: 494 GQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPG 553
Query: 483 EEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMM 542
+HYA +IDLLC++G+ A + ++PF+P IWE++L ++G+++L A+++
Sbjct: 554 ADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF 613
Query: 543 DLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGE 602
L Y LL+ +A G+WE + RV+K+MR G+ K CSWI ++ +++TF +
Sbjct: 614 GLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDD 673
Query: 603 LQHHGGQKIYLVLRLLTWEMEDEGCV 628
H + +Y+ L+ L EM G V
Sbjct: 674 TSHPEAEAVYIYLQDLGKEMRRLGYV 699
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 152/292 (52%), Gaps = 8/292 (2%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKL-GFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQK 79
+I C + K +H ++ + F+ H N + LY + G D+ +F+++P K
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDFSFH--FDNSLVSLYYKCGKFDEARAIFEKMPAK 349
Query: 80 NCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQ 139
+ +SWN L G + S ++ A +F E+ E +++SW MISG A G+ + L++FS M+
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 140 LQGVRPSGFTFSILLSTVS---SACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVL 196
+G P + FS + + + + C+G+Q H +++ G S++ GN+LI MY K GV+
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFD-SSLSAGNALITMYAKCGVV 468
Query: 197 YYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINAC 256
A VF M LD +SWN+LI+ G+G A+D + M G PD T+ V+ AC
Sbjct: 469 EEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC 528
Query: 257 TKLRNLDKGKQVF-ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQL 307
+ +D+G++ F ++ + + IDL + + D+ + E L
Sbjct: 529 SHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL 580
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 201/602 (33%), Positives = 321/602 (53%), Gaps = 9/602 (1%)
Query: 35 KTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKS 94
K++H K + TYL N ++LYS+ G F + N S+N+ ++ K
Sbjct: 28 KSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKD 87
Query: 95 DNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILL 154
+ A ++FDEIP+PD VS+N++ISGYA + A+ +F +M+ G GFT S L+
Sbjct: 88 SKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLI 147
Query: 155 STVSSACH-GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEEL-DII 212
+ KQ+H + G S + N+ + Y K G+L A VF M+EL D +
Sbjct: 148 AACCDRVDLIKQLHCFSVSGGFD-SYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEV 206
Query: 213 SWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALS 272
SWNS+I G AL + M + G+ D +T++ V+NA T L +L G+Q
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKL 266
Query: 273 VKVGFLSNSIVLSATIDLFSKC---NRLEDSVRLFEQLDRWDYAVINVMISTYG-RYGFG 328
+K GF NS V S ID +SKC + + DS ++F+++ D V N MIS Y
Sbjct: 267 IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELS 326
Query: 329 EVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAV-VASS 386
E A++ F+ M R RP + + CV S+ + Q H +AIKS SN + V ++
Sbjct: 327 EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNA 386
Query: 387 LMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPD 446
L+ +Y K+G++ + +F ++ + + VS+N ++ G Q+G E L +++ +L+ G+ P+
Sbjct: 387 LISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPN 446
Query: 447 RITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDIT 506
+IT AVL AC + G VD+G F+ MKE + + P EHY+C+IDLL +AG+L +A
Sbjct: 447 KITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFI 506
Query: 507 STMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWE 566
MP++PG W ++L A + ++ L E A +M +Q + PY +L YA +WE
Sbjct: 507 DAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWE 566
Query: 567 AIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDEG 626
+ V+K MR I K GCSWI +K + + F A + H +++ L + +M+ G
Sbjct: 567 EMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVG 626
Query: 627 CV 628
V
Sbjct: 627 YV 628
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 196/427 (45%), Gaps = 54/427 (12%)
Query: 32 DFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGL 91
D K +H GF++++ + N + YS+ G
Sbjct: 155 DLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL-------------------------- 188
Query: 92 LKSDNLDTALKVFDEIPE-PDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTF 150
L A+ VF + E D VSWNSMI Y AL ++ +M +G + FT
Sbjct: 189 -----LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTL 243
Query: 151 SILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLG---VLYYAFGVFL 204
+ +L+ ++S H G+Q HG +I++G N +G+ LID Y K G +Y + VF
Sbjct: 244 ASVLNALTSLDHLIGGRQFHGKLIKAGFH-QNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 205 NMEELDIISWNSLISG-CFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLD 263
+ D++ WN++ISG N E A+ F M+ G+ PD+ + V +AC+ L +
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 264 KGKQVFALSVKVGFLSNSI-VLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTY 322
+ KQ+ L++K SN I V +A I L+ K L+D+ +F+++ + N MI Y
Sbjct: 363 QCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGY 422
Query: 323 GRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQ-FHSMAIKSGFDSN 380
++G G AL L+Q ML I P + T VLS+ V+ G + F++M +
Sbjct: 423 AQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPE 482
Query: 381 AVVASSLMEMYAKTGSIDSSTEIFVKLD-KRDLVSWNTIM--------MGLTQNGRAAET 431
A S ++++ + G ++ + + K V+W ++ M L + RAA
Sbjct: 483 AEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAE--RAANE 540
Query: 432 LDVFEEL 438
L V + L
Sbjct: 541 LMVMQPL 547
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 52/333 (15%)
Query: 260 RNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRL---------------------- 297
R+L GK + AL VK S++ + + ++L+SKC RL
Sbjct: 22 RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIV 81
Query: 298 ----EDSV-----RLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEF 348
+DS +LF+++ + D N +IS Y A+ LF+ M + F
Sbjct: 82 KAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGF 141
Query: 349 TLSCVLSSIPIPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLD 408
TLS ++++ V+ Q H ++ GFDS + V ++ + Y+K G + + +F +D
Sbjct: 142 TLSGLIAAC-CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 409 K-RDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACN-----YGGF 462
+ RD VSWN++++ Q+ A+ L +++E++ +G D TLA+VL A GG
Sbjct: 201 ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR 260
Query: 463 VDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQ----PGCSIW 518
G L+ + + V G +ID + G D S FQ P +W
Sbjct: 261 QFHGKLIKAGFHQNSHVGSG------LIDFYSKCGGCDGMYD--SEKVFQEILSPDLVVW 312
Query: 519 ESILRASAIYGDVKLTENVAERMMDLQLPSPLP 551
+++ ++ + +L+E + +Q P
Sbjct: 313 NTMISGYSM--NEELSEEAVKSFRQMQRIGHRP 343
Score = 36.2 bits (82), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/128 (17%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 353 VLSSIPIPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDL 412
+L S+ + G H++ +KS S+ +++ + +Y+K G + + F ++ ++
Sbjct: 15 LLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNV 74
Query: 413 VSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVD-----KGM 467
S+N I+ ++ + + + +L +E PD ++ ++ G+ D M
Sbjct: 75 FSYNVIVKAYAKDSK----IHIARQLFDEIPQPDTVSYNTLI-----SGYADARETFAAM 125
Query: 468 LVFSAMKE 475
++F M++
Sbjct: 126 VLFKRMRK 133
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 327 bits (837), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/605 (31%), Positives = 315/605 (52%), Gaps = 37/605 (6%)
Query: 27 SFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNI 86
S +S + +HG + K GF +GN + Y
Sbjct: 207 SLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY-------------------------- 240
Query: 87 CLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPS 146
LK+ +D+A KVFDE+ E DV+SWNS+I+GY S G ++ L +F +M + G+
Sbjct: 241 -----LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 147 GFTFSILLSTVSSA---CHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVF 203
T + + + + G+ +H +++ S + N+L+DMY K G L A VF
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDLDSAKAVF 354
Query: 204 LNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLD 263
M + ++S+ S+I+G G A+ F M G SPD YT++ V+N C + R LD
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 264 KGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYG 323
+GK+V + + V +A +D+++KC ++++ +F ++ D N +I Y
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 474
Query: 324 RYGFGEVALELFQLMLRED-IRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNA 381
+ + AL LF L+L E P E T++CVL + + + G + H +++G+ S+
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 382 VVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEE 441
VA+SL++MYAK G++ + +F + +DLVSW ++ G +G E + +F ++ +
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 442 GLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGK 501
G+ D I+ ++L AC++ G VD+G F+ M+ E + P EHYACI+D+L + G L K
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654
Query: 502 AIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAM 561
A MP P +IW ++L I+ DVKL E VAE++ +L+ + Y L+ YA
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 714
Query: 562 RGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWE 621
+WE + R++K + + G+ K GCSWI IK R+ F AG+ + + I LR +
Sbjct: 715 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRAR 774
Query: 622 MEDEG 626
M +EG
Sbjct: 775 MIEEG 779
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 214/447 (47%), Gaps = 37/447 (8%)
Query: 25 CLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISW 84
C KS K + + GF + LG++ +Y+ G + ++FDE+ + + W
Sbjct: 104 CADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFW 163
Query: 85 NICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVR 144
NI + L KS + SG ++ +F KM GV
Sbjct: 164 NILMNELAKSGDF----------------------SG---------SIGLFKKMMSSGVE 192
Query: 145 PSGFTFSIL---LSTVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFG 201
+TFS + S++ S G+Q+HG +++SG N V GNSL+ Y K + A
Sbjct: 193 MDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV-GNSLVAFYLKNQRVDSARK 251
Query: 202 VFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRN 261
VF M E D+ISWNS+I+G ++G E L F M SG D TI V C R
Sbjct: 252 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRL 311
Query: 262 LDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMIST 321
+ G+ V ++ VK F + +D++SKC L+ + +F ++ MI+
Sbjct: 312 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371
Query: 322 YGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSN 380
Y R G A++LF+ M E I P +T++ VL+ ++ G + H ++ +
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD 431
Query: 381 AVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLE 440
V+++LM+MYAK GS+ + +F ++ +D++SWNTI+ G ++N A E L +F LLE
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 441 EG-LPPDRITLAAVLLACNYGGFVDKG 466
E PD T+A VL AC DKG
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKG 518
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 156/314 (49%), Gaps = 2/314 (0%)
Query: 163 GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCF 222
GK++ + IR + + LG+ L MY G L A VF ++ + WN L++
Sbjct: 113 GKEVD-NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELA 171
Query: 223 NSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSI 282
SG ++ F M SG D YT S V + + LR++ G+Q+ +K GF +
Sbjct: 172 KSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS 231
Query: 283 VLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLRED 342
V ++ + + K R++ + ++F+++ D N +I+ Y G E L +F ML
Sbjct: 232 VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
Query: 343 IRPTEFTLSCVLSSIPIPP-VEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSST 401
I T+ V + + G HS+ +K+ F ++L++MY+K G +DS+
Sbjct: 292 IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAK 351
Query: 402 EIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGG 461
+F ++ R +VS+ +++ G + G A E + +FEE+ EEG+ PD T+ AVL C
Sbjct: 352 AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYR 411
Query: 462 FVDKGMLVFSAMKE 475
+D+G V +KE
Sbjct: 412 LLDEGKRVHEWIKE 425
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 115/228 (50%), Gaps = 1/228 (0%)
Query: 245 DEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLF 304
D T+ V+ C ++L GK+V GF+ +S + S +++ C L+++ R+F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 305 EQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSI-PIPPVE 363
+++ N++++ + G ++ LF+ M+ + +T SCV S + V
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 364 HGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLT 423
G Q H +KSGF V +SL+ Y K +DS+ ++F ++ +RD++SWN+I+ G
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 424 QNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFS 471
NG A + L VF ++L G+ D T+ +V C + G V S
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS 320
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 144/296 (48%), Gaps = 41/296 (13%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFK--LGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEI 76
+ +++ C ++ D K +H + + LGF+ ++ N +D+Y++ G+ + +F E+
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSMQEAELVFSEM 458
Query: 77 PQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFS 136
K+ ISW N++I GY+ Y++ AL +F+
Sbjct: 459 RVKDIISW-------------------------------NTIIGGYSKNCYANEALSLFN 487
Query: 137 -KMQLQGVRPSGFTFSILL---STVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGK 192
++ + P T + +L +++S+ G++IHG ++R+G S+ + NSL+DMY K
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY-FSDRHVANSLVDMYAK 546
Query: 193 LGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIV 252
G L A +F ++ D++SW +I+G G+G+ A+ F MR +G DE + +
Sbjct: 547 CGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Query: 253 INACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATI-DLFSKCNRLEDSVRLFEQL 307
+ AC+ +D+G + F + + ++ A I D+ ++ L + R E +
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 662
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 323 bits (829), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/599 (30%), Positives = 315/599 (52%), Gaps = 36/599 (6%)
Query: 34 AKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLK 93
+ +H + KLGF ++ + L+LY+ K
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYA-------------------------------K 436
Query: 94 SDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSIL 153
+++TAL F E +VV WN M+ Y + +F +MQ++ + P+ +T+ +
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 154 LST---VSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELD 210
L T + G+QIH +I++ L N + + LIDMY KLG L A+ + + D
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQL-NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 555
Query: 211 IISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFA 270
++SW ++I+G + + AL F M G DE ++ ++AC L+ L +G+Q+ A
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 615
Query: 271 LSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEV 330
+ GF S+ +A + L+S+C ++E+S FEQ + D N ++S + + G E
Sbjct: 616 QACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEE 675
Query: 331 ALELFQLMLREDIRPTEFTL-SCVLSSIPIPPVEHGSQFHSMAIKSGFDSNAVVASSLME 389
AL +F M RE I FT S V ++ ++ G Q H++ K+G+DS V ++L+
Sbjct: 676 ALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALIS 735
Query: 390 MYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRIT 449
MYAK GSI + + F+++ ++ VSWN I+ +++G +E LD F++++ + P+ +T
Sbjct: 736 MYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 795
Query: 450 LAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTM 509
L VL AC++ G VDKG+ F +M EYG+ P EHY C++D+L +AG L +A + M
Sbjct: 796 LVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM 855
Query: 510 PFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIV 569
P +P +W ++L A ++ ++++ E A +++L+ Y LL+ YA+ +W+A
Sbjct: 856 PIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARD 915
Query: 570 RVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDEGCV 628
++ M++ G+ K G SWI +KN I++F G+ H +I+ + LT + G V
Sbjct: 916 LTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYV 974
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 225/432 (52%), Gaps = 36/432 (8%)
Query: 30 SFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLR 89
+FD + IH + G T + N +DLYSR G
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGF------------------------ 237
Query: 90 GLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFT 149
+D A +VFD + D SW +MISG + A+ +F M + G+ P+ +
Sbjct: 238 -------VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 150 FSILLST---VSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNM 206
FS +LS + S G+Q+HG +++ G S S+ + N+L+ +Y LG L A +F NM
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFS-SDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 207 EELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGK 266
+ D +++N+LI+G GYGE A++ F M G PD T++ ++ AC+ L +G+
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 267 QVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYG 326
Q+ A + K+GF SN+ + A ++L++KC +E ++ F + + + + NVM+ YG
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 327 FGEVALELFQLMLREDIRPTEFTLSCVLSS-IPIPPVEHGSQFHSMAIKSGFDSNAVVAS 385
+ +F+ M E+I P ++T +L + I + +E G Q HS IK+ F NA V S
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 386 SLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPP 445
L++MYAK G +D++ +I ++ +D+VSW T++ G TQ + L F ++L+ G+
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 446 DRITLAAVLLAC 457
D + L + AC
Sbjct: 590 DEVGLTNAVSAC 601
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 241/520 (46%), Gaps = 48/520 (9%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S ++ C +S + + +HG + KLGF++ TY+ N + LY G +F + Q
Sbjct: 292 SSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ 351
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
++ +++N ++I+G + CGY + A+E+F +M
Sbjct: 352 RDAVTYN-------------------------------TLINGLSQCGYGEKAMELFKRM 380
Query: 139 QLQGVRPSGFTFSILLSTVS---SACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGV 195
L G+ P T + L+ S + G+Q+H + G + +N + G +L+++Y K
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAKCAD 439
Query: 196 LYYAFGVFLNMEELDIISWNSLISGCFNSGYGEL-----ALDQFYSMRYSGYSPDEYTIS 250
+ A FL E +++ WN ++ YG L + F M+ P++YT
Sbjct: 440 IETALDYFLETEVENVVLWNVML-----VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 251 IVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRW 310
++ C +L +L+ G+Q+ + +K F N+ V S ID+++K +L+ + + +
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 311 DYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFH 369
D MI+ Y +Y F + AL F+ ML IR E L+ +S+ + ++ G Q H
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 370 SMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAA 429
+ A SGF S+ ++L+ +Y++ G I+ S F + + D ++WN ++ G Q+G
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Query: 430 ETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACI 489
E L VF + EG+ + T + + A + + +G V + + + G E +
Sbjct: 675 EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNAL 733
Query: 490 IDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYG 529
I + + G + A + + S W +I+ A + +G
Sbjct: 734 ISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSKHG 772
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/499 (28%), Positives = 236/499 (47%), Gaps = 55/499 (11%)
Query: 21 LIDRCLSFK-SFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQK 79
L++ CL S D + +H + KLG +++ L + D Y
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFY------------------- 130
Query: 80 NCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQ 139
L K D L A KVFDE+PE + +WN MI AS +F +M
Sbjct: 131 -----------LFKGD-LYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMV 178
Query: 140 LQGVRPSGFTFSILLSTVSSACHG--------KQIHGSMIRSGLSLSNVVLGNSLIDMYG 191
+ V P+ TFS +L AC G +QIH ++ GL S VV N LID+Y
Sbjct: 179 SENVTPNEGTFSGVLE----ACRGGSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYS 233
Query: 192 KLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISI 251
+ G + A VF + D SW ++ISG + A+ F M G P Y S
Sbjct: 234 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 293
Query: 252 VINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWD 311
V++AC K+ +L+ G+Q+ L +K+GF S++ V +A + L+ L + +F + + D
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 312 YAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTL-SCVLSSIPIPPVEHGSQFHS 370
N +I+ + G+GE A+ELF+ M + + P TL S V++ + G Q H+
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 371 MAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMM--GLTQNGRA 428
K GF SN + +L+ +YAK I+++ + F++ + ++V WN +++ GL + R
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLR- 472
Query: 429 AETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYAC 488
+ +F ++ E + P++ T ++L C G ++ G + S + + + Y C
Sbjct: 473 -NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA---YVC 528
Query: 489 --IIDLLCQAGQLGKAIDI 505
+ID+ + G+L A DI
Sbjct: 529 SVLIDMYAKLGKLDTAWDI 547
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 36/293 (12%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
+ + C ++ + IH GF++ N + LYSR G ++ F++
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
+ I+WN + G +S N + AL+V F +M
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRV-------------------------------FVRM 683
Query: 139 QLQGVRPSGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGV 195
+G+ + FTF + S + GKQ+H + ++G S + N+LI MY K G
Sbjct: 684 NREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD-SETEVCNALISMYAKCGS 742
Query: 196 LYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINA 255
+ A FL + + +SWN++I+ G+G ALD F M +S P+ T+ V++A
Sbjct: 743 ISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSA 802
Query: 256 CTKLRNLDKGKQVF-ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQL 307
C+ + +DKG F +++ + G +D+ ++ L + +++
Sbjct: 803 CSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM 855
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 7/154 (4%)
Query: 309 RWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSI--PIPPVEHGS 366
R +A I+V IS F E ++ + IRP TL +L ++ G
Sbjct: 51 RASFAAISVYISE--DESFQEKRIDSVE---NRGIRPNHQTLKWLLEGCLKTNGSLDEGR 105
Query: 367 QFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNG 426
+ HS +K G DSN ++ L + Y G + + ++F ++ +R + +WN ++ L
Sbjct: 106 KLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 165
Query: 427 RAAETLDVFEELLEEGLPPDRITLAAVLLACNYG 460
E +F ++ E + P+ T + VL AC G
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 215/659 (32%), Positives = 327/659 (49%), Gaps = 90/659 (13%)
Query: 25 CLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISW 84
C S ++ H GF ++ ++GN + +YSR C S
Sbjct: 137 CGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR------------------CRS- 177
Query: 85 NICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQ-GV 143
L A KVFDE+ DVVSWNS+I YA G ALEMFS+M + G
Sbjct: 178 ------------LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 144 RPSGFTF-SILLSTVSSACH--GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAF 200
RP T ++L S H GKQ+H + S + + N+ +GN L+DMY K G++ A
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM-IQNMFVGNCLVDMYAKCGMMDEAN 284
Query: 201 GVFLNMEELDIISWNSL-----------------------------------ISGCFNSG 225
VF NM D++SWN++ ISG G
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 226 YGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKV-------GFL 278
G AL M SG P+E T+ V++ C + L GK++ ++K G
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404
Query: 279 SNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVIN--VMISTYGRYGFGEVALELFQ 336
++V++ ID+++KC +++ + +F+ L + V+ VMI Y ++G ALEL
Sbjct: 405 DENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 337 LMLRED--IRPTEFTLSCVL-SSIPIPPVEHGSQFHSMAIKSGFDSNAV---VASSLMEM 390
M ED RP FT+SC L + + + G Q H+ A+++ NAV V++ L++M
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLFVSNCLIDM 522
Query: 391 YAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITL 450
YAK GSI + +F + ++ V+W ++M G +G E L +F+E+ G D +TL
Sbjct: 523 YAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTL 582
Query: 451 AAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMP 510
VL AC++ G +D+GM F+ MK +GV PG EHYAC++DLL +AG+L A+ + MP
Sbjct: 583 LVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMP 642
Query: 511 FQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVR 570
+P +W + L I+G V+L E AE++ +L Y+LL+ YA GRW+ + R
Sbjct: 643 MEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTR 702
Query: 571 VKKVMRKNGINKVTGCSWI-GIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDEGCV 628
++ +MR G+ K GCSW+ GIK TF G+ H ++IY VL ++D G V
Sbjct: 703 IRSLMRHKGVKKRPGCSWVEGIKGTT-TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYV 760
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 220/487 (45%), Gaps = 57/487 (11%)
Query: 97 LDTALKVFDEIPEPD--VVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILL 154
L A+ + P D V WNS+I Y G ++ L +F M P +TF +
Sbjct: 75 LSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVF 134
Query: 155 ST---VSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDI 211
+SS G+ H + +G +SNV +GN+L+ MY + L A VF M D+
Sbjct: 135 KACGEISSVRCGESAHALSLVTGF-ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV 193
Query: 212 ISWNSLISGCFNSGYGELALDQFYSMRYS-GYSPDEYTISIVINACTKLRNLDKGKQVFA 270
+SWNS+I G ++AL+ F M G PD T+ V+ C L GKQ+
Sbjct: 194 VSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHC 253
Query: 271 LSVKVGFLSNSIVLSATIDLFSKC-------------------------------NRLED 299
+V + N V + +D+++KC R ED
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFED 313
Query: 300 SVRLFEQLD----RWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLS 355
+VRLFE++ + D + IS Y + G G AL + + ML I+P E TL VLS
Sbjct: 314 AVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 356 SIP-IPPVEHGSQFHSMAI-------KSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKL 407
+ + HG + H AI K+G +V + L++MYAK +D++ +F L
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
Query: 408 D--KRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLP--PDRITLAAVLLACNYGGFV 463
+RD+V+W ++ G +Q+G A + L++ E+ EE P+ T++ L+AC +
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 464 DKGMLVFS-AMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESIL 522
G + + A++ + +P C+ID+ + G + A + M + + W S++
Sbjct: 494 RIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNMMAKNEVT-WTSLM 551
Query: 523 RASAIYG 529
++G
Sbjct: 552 TGYGMHG 558
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 158/313 (50%), Gaps = 21/313 (6%)
Query: 164 KQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELD--IISWNSLISGC 221
K IH ++ G+ N L + LI Y +G L +A + D + WNSLI
Sbjct: 45 KLIHQKLLSFGILTLN--LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY 102
Query: 222 FNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNS 281
++G L F M ++PD YT V AC ++ ++ G+ ALS+ GF+SN
Sbjct: 103 GDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNV 162
Query: 282 IVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLRE 341
V +A + ++S+C L D+ ++F+++ WD N +I +Y + G +VALE+F M E
Sbjct: 163 FVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE 222
Query: 342 -DIRPTEFTLSCVLSSIPIPPVEH------GSQFHSMAIKSGFDSNAVVASSLMEMYAKT 394
RP TL VL PP G Q H A+ S N V + L++MYAK
Sbjct: 223 FGCRPDNITLVNVL-----PPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 395 GSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVL 454
G +D + +F + +D+VSWN ++ G +Q GR + + +FE++ EE + D +T +A +
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 455 LACNYGGFVDKGM 467
G+ +G+
Sbjct: 338 -----SGYAQRGL 345
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 317/611 (51%), Gaps = 38/611 (6%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKN 80
+I C S K +H + KL ++H N + +Y RF D
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSD------------ 221
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
A +VF IP D++SW+S+I+G++ G+ AL +M
Sbjct: 222 -------------------ASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLS 262
Query: 141 QGV-RPSGFTFSILLSTVSSAC---HGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVL 196
GV P+ + F L SS +G QIHG I+S L+ N + G SL DMY + G L
Sbjct: 263 FGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELA-GNAIAGCSLCDMYARCGFL 321
Query: 197 YYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINAC 256
A VF +E D SWN +I+G N+GY + A+ F MR SG+ PD ++ ++ A
Sbjct: 322 NSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQ 381
Query: 257 TKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQL-DRWDYAVI 315
TK L +G Q+ + +K GFL++ V ++ + +++ C+ L LFE + D
Sbjct: 382 TKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSW 441
Query: 316 NVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSS-IPIPPVEHGSQFHSMAIK 374
N +++ ++ L LF+LML + P T+ +L + I ++ GSQ H ++K
Sbjct: 442 NTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLK 501
Query: 375 SGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDV 434
+G + + L++MYAK GS+ + IF +D RD+VSW+T+++G Q+G E L +
Sbjct: 502 TGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALIL 561
Query: 435 FEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLC 494
F+E+ G+ P+ +T VL AC++ G V++G+ +++ M+ E+G+ P +EH +C++DLL
Sbjct: 562 FKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLA 621
Query: 495 QAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSL 554
+AG+L +A M +P +W+++L A G+V L + AE ++ + + + L
Sbjct: 622 RAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVL 681
Query: 555 LTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLV 614
L +A G WE ++ M+K+ + K+ G SWI I+++I+ F A ++ H IY V
Sbjct: 682 LCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTV 741
Query: 615 LRLLTWEMEDE 625
L + +M DE
Sbjct: 742 LHNIWSQMLDE 752
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 228/495 (46%), Gaps = 39/495 (7%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKN 80
LI C S +S + IH H+ T L N L +Y + G+ D ++FD +P++N
Sbjct: 73 LICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERN 132
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
+VS+ S+I+GY+ G A+ ++ KM
Sbjct: 133 -------------------------------LVSYTSVITGYSQNGQGAEAIRLYLKMLQ 161
Query: 141 QGVRPSGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLY 197
+ + P F F ++ +S+ GKQ+H +I+ S S+++ N+LI MY + +
Sbjct: 162 EDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE-SSSHLIAQNALIAMYVRFNQMS 220
Query: 198 YAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSG-YSPDEYTISIVINAC 256
A VF + D+ISW+S+I+G G+ AL M G + P+EY + AC
Sbjct: 221 DASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC 280
Query: 257 TKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVIN 316
+ L D G Q+ L +K N+I + D++++C L + R+F+Q++R D A N
Sbjct: 281 SSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWN 340
Query: 317 VMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIP-PVEHGSQFHSMAIKS 375
V+I+ G+ + A+ +F M P +L +L + P + G Q HS IK
Sbjct: 341 VIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKW 400
Query: 376 GFDSNAVVASSLMEMYAKTGSIDSSTEIFVKL-DKRDLVSWNTIMMGLTQNGRAAETLDV 434
GF ++ V +SL+ MY + +F + D VSWNTI+ Q+ + E L +
Sbjct: 401 GFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRL 460
Query: 435 FEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLC 494
F+ +L PD IT+ +L C + G V + G+ P + +ID+
Sbjct: 461 FKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH-CYSLKTGLAPEQFIKNGLIDMYA 519
Query: 495 QAGQLGKAIDITSTM 509
+ G LG+A I +M
Sbjct: 520 KCGSLGQARRIFDSM 534
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 164/369 (44%), Gaps = 41/369 (11%)
Query: 215 NSLISGCFNSGYGELALDQF-YSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSV 273
N I+ S + AL+ F ++ + S + T +I AC+ R+L +G+++ +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 274 KVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALE 333
++I+ + + ++ KC L D+ +F+ + + +I+ Y + G G A+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 334 LFQLMLREDIRPTEFTLSCVLSSIPIPP-VEHGSQFHSMAIKSGFDSNAVVASSLMEMYA 392
L+ ML+ED+ P +F ++ + V G Q H+ IK S+ + ++L+ MY
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 393 KTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGL-PPDRITLA 451
+ + ++ +F + +DL+SW++I+ G +Q G E L +E+L G+ P+
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 452 AVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPF 511
+ L AC+ S ++ +YG + H CI L G AI
Sbjct: 275 SSLKACS------------SLLRPDYG---SQIHGLCIKSELA-----GNAI-------- 306
Query: 512 QPGCSIWESILRASAIYGDVKLTENVAERMMD-LQLPSPLPYSLLTQAYAMRGRWEAIVR 570
GCS+ + R + N A R+ D ++ P ++++ A G + V
Sbjct: 307 -AGCSLCDMYARCGFL--------NSARRVFDQIERPDTASWNVIIAGLANNGYADEAVS 357
Query: 571 VKKVMRKNG 579
V MR +G
Sbjct: 358 VFSQMRSSG 366
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 304/541 (56%), Gaps = 11/541 (2%)
Query: 92 LKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFS 151
LK N+ A +FD+ VV+WNSMISGYA+ G AL MF M+L VR S +F+
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299
Query: 152 ILL---STVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEE 208
++ + + +Q+H S+++ G L + + +L+ Y K + A +F +
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGF-LFDQNIRTALMVAYSKCTAMLDALRLFKEIGC 358
Query: 209 L-DIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQ 267
+ +++SW ++ISG + E A+D F M+ G P+E+T S+++ A + +
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI----SPSE 414
Query: 268 VFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGF 327
V A VK + +S V +A +D + K ++E++ ++F +D D + M++ Y + G
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 328 GEVALELFQLMLREDIRPTEFTLSCVLS--SIPIPPVEHGSQFHSMAIKSGFDSNAVVAS 385
E A+++F + + I+P EFT S +L+ + + G QFH AIKS DS+ V+S
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 386 SLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPP 445
+L+ MYAK G+I+S+ E+F + ++DLVSWN+++ G Q+G+A + LDVF+E+ + +
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKM 594
Query: 446 DRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDI 505
D +T V AC + G V++G F M + + P +EH +C++DL +AGQL KA+ +
Sbjct: 595 DGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 654
Query: 506 TSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRW 565
MP G +IW +IL A ++ +L AE+++ ++ Y LL+ YA G W
Sbjct: 655 IENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDW 714
Query: 566 EAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDE 625
+ +V+K+M + + K G SWI +KN+ Y+F AG+ H +IY+ L L+ ++D
Sbjct: 715 QERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDL 774
Query: 626 G 626
G
Sbjct: 775 G 775
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 262/505 (51%), Gaps = 46/505 (9%)
Query: 92 LKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFS 151
+K N KVFDE+ E +VV+W ++ISGYA +D L +F +MQ +G +P+ FTF+
Sbjct: 139 MKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFA 198
Query: 152 ILLSTVSS---ACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEE 208
L ++ G Q+H ++++GL + + NSLI++Y K G + A +F E
Sbjct: 199 AALGVLAEEGVGGRGLQVHTVVVKNGLD-KTIPVSNSLINLYLKCGNVRKARILFDKTEV 257
Query: 209 LDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQV 268
+++WNS+ISG +G AL FYSMR + E + + VI C L+ L +Q+
Sbjct: 258 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 269 FALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVI-NVMISTYGRYGF 327
VK GFL + + +A + +SKC + D++RLF+++ V MIS + +
Sbjct: 318 HCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG 377
Query: 328 GEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASS 386
E A++LF M R+ +RP EFT S +L+++P I P S+ H+ +K+ ++ ++ V ++
Sbjct: 378 KEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTA 433
Query: 387 LMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPD 446
L++ Y K G ++ + ++F +D +D+V+W+ ++ G Q G + +F EL + G+ P+
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPN 493
Query: 447 RITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDIT 506
T +++L C +A G G++ + I +L ++ ++
Sbjct: 494 EFTFSSILNVC-------------AATNASMG--QGKQFHGFAIK-----SRLDSSLCVS 533
Query: 507 STMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWE 566
S ++L A G+++ E V +R + L S ++ + YA G+
Sbjct: 534 S------------ALLTMYAKKGNIESAEEVFKRQREKDLVS---WNSMISGYAQHGQAM 578
Query: 567 AIVRVKKVMRKNGINKVTGCSWIGI 591
+ V K M+K + K+ G ++IG+
Sbjct: 579 KALDVFKEMKKRKV-KMDGVTFIGV 602
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 196/413 (47%), Gaps = 38/413 (9%)
Query: 12 KASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQ 71
+ S S + +I C + K F + +H + K GF + + YS+ D L+
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 72 LFDEIP-QKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDY 130
LF EI N +SW + G L++D +
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDG-------------------------------KEE 380
Query: 131 ALEMFSKMQLQGVRPSGFTFSILLSTVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMY 190
A+++FS+M+ +GVRP+ FT+S++L+ + ++H ++++ S+ V G +L+D Y
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTAL-PVISPSEVHAQVVKTNYERSSTV-GTALLDAY 438
Query: 191 GKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTIS 250
KLG + A VF +++ DI++W+++++G +G E A+ F + G P+E+T S
Sbjct: 439 VKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFS 498
Query: 251 IVINACTKLR-NLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDR 309
++N C ++ +GKQ ++K S+ V SA + +++K +E + +F++
Sbjct: 499 SILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Query: 310 WDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPP-VEHGSQF 368
D N MIS Y ++G AL++F+ M + ++ T V ++ VE G ++
Sbjct: 559 KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY 618
Query: 369 HSMAIKS-GFDSNAVVASSLMEMYAKTGSIDSSTEIFVKL-DKRDLVSWNTIM 419
+ ++ S ++++Y++ G ++ + ++ + + W TI+
Sbjct: 619 FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL 671
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 1/263 (0%)
Query: 196 LYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINA 255
LY A +F D S+ SL+ G G + A F ++ G D S V+
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 256 CTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVI 315
L + G+Q+ +K GFL + V ++ +D + K + +D ++F+++ +
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 316 NVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPPV-EHGSQFHSMAIK 374
+IS Y R + L LF M E +P FT + L + V G Q H++ +K
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 375 SGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDV 434
+G D V++SL+ +Y K G++ + +F K + + +V+WN+++ G NG E L +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 435 FEELLEEGLPPDRITLAAVLLAC 457
F + + + A+V+ C
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLC 305
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 295 NRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVL 354
+RL ++ LF++ D ++ + R G + A LF + R + S VL
Sbjct: 41 SRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100
Query: 355 S-SIPIPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLV 413
S + G Q H IK GF + V +SL++ Y K + ++F ++ +R++V
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 414 SWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAM 473
+W T++ G +N E L +F + EG P+ T AA L G +G+ V + +
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 317 bits (811), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 295/547 (53%), Gaps = 20/547 (3%)
Query: 95 DNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILL 154
++ + A KVFD++ E +VV+W MI+ G+ A+ F M L G FT L
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT----L 272
Query: 155 STVSSACH-------GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKL---GVLYYAFGVFL 204
S+V SAC GKQ+H IRSGL + +V SL+DMY K G + VF
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGL-VDDVEC--SLVDMYAKCSADGSVDDCRKVFD 329
Query: 205 NMEELDIISWNSLISGCF-NSGYGELALDQFYSMRYSGY-SPDEYTISIVINACTKLRNL 262
ME+ ++SW +LI+G N A++ F M G+ P+ +T S AC L +
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 263 DKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTY 322
GKQV + K G SNS V ++ I +F K +R+ED+ R FE L + N +
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 323 GRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNA 381
R E A +L + ++ + FT + +LS + + + G Q HS +K G N
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509
Query: 382 VVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEE 441
V ++L+ MY+K GSID+++ +F ++ R+++SW +++ G ++G A L+ F +++EE
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569
Query: 442 GLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGK 501
G+ P+ +T A+L AC++ G V +G F++M E++ + P EHYAC++DLLC+AG L
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 502 AIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAM 561
A + +TMPFQ +W + L A ++ + +L + A ++++L P Y L+ YA
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC 689
Query: 562 RGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWE 621
G+WE +++ M++ + K GCSWI + ++I+ F G+ H +IY L L E
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITE 749
Query: 622 MEDEGCV 628
++ G V
Sbjct: 750 IKRCGYV 756
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/560 (23%), Positives = 268/560 (47%), Gaps = 51/560 (9%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S L+ C+ + F K +H L + + L N + LYS+ G S +F+ + +
Sbjct: 66 SSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRR 125
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
+ DVVSW++M++ Y + G A+++F +
Sbjct: 126 ----------------------------FGKRDVVSWSAMMACYGNNGRELDAIKVFVEF 157
Query: 139 QLQGVRPSGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGK-LG 194
G+ P+ + ++ ++ S++ G+ G ++++G S+V +G SLIDM+ K
Sbjct: 158 LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGEN 217
Query: 195 VLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVIN 254
A+ VF M EL++++W +I+ C G+ A+ F M SG+ D++T+S V +
Sbjct: 218 SFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFS 277
Query: 255 ACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCN---RLEDSVRLFEQLDRWD 311
AC +L NL GKQ+ + +++ G + + V + +D+++KC+ ++D ++F++++ D
Sbjct: 278 ACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRME--D 333
Query: 312 YAVIN--VMISTYGRY-GFGEVALELFQLMLRE-DIRPTEFTLSCVLSS---IPIPPVEH 364
++V++ +I+ Y + A+ LF M+ + + P FT S + + P V
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV-- 391
Query: 365 GSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQ 424
G Q A K G SN+ VA+S++ M+ K+ ++ + F L +++LVS+NT + G +
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Query: 425 NGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEE 484
N + + E+ E L T A++L G + KG + S + + G+ +
Sbjct: 452 NLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV-KLGLSCNQP 510
Query: 485 HYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYG-DVKLTENVAERMMD 543
+I + + G + A + + M + S W S++ A +G +++ E + + +
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVIS-WTSMITGFAKHGFAIRVLETFNQMIEE 569
Query: 544 LQLPSPLPYSLLTQAYAMRG 563
P+ + Y + A + G
Sbjct: 570 GVKPNEVTYVAILSACSHVG 589
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 169/342 (49%), Gaps = 18/342 (5%)
Query: 131 ALEMFSKMQLQGVRP-SGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSL 186
A+ M G+RP TFS LL + A GK +H +I + + VL NSL
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIE-PDSVLYNSL 103
Query: 187 IDMYGKLGVLYYAFGVFLNMEEL---DIISWNSLISGCFNSGYGELALDQFYSMRYSGYS 243
I +Y K G A VF M D++SW+++++ N+G A+ F G
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 244 PDEYTISIVINACTKLRNLDKGKQVFALSVKVG-FLSNSIVLSATIDLFSKC-NRLEDSV 301
P++Y + VI AC+ + G+ +K G F S+ V + ID+F K N E++
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 302 RLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IP 360
++F+++ + +MI+ + GF A+ F M+ +FTLS V S+ +
Sbjct: 224 KVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELE 283
Query: 361 PVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKT---GSIDSSTEIFVKLDKRDLVSWNT 417
+ G Q HS AI+SG + V SL++MYAK GS+D ++F +++ ++SW
Sbjct: 284 NLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTA 341
Query: 418 IMMGLTQN-GRAAETLDVFEELLEEG-LPPDRITLAAVLLAC 457
++ G +N A E +++F E++ +G + P+ T ++ AC
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 36/271 (13%)
Query: 2 SSYLKKAHVNKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYS 61
S + + HV ++ S C + K + G FK G +++ + N + ++
Sbjct: 361 SEMITQGHVEPNHFTF-SSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFV 419
Query: 62 RFGTSDDVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISG 121
+ +D + F+ + +KN +S+N L G ++ N + A K+ EI E ++
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL--------- 470
Query: 122 YASCGYSDYALEMFSKMQLQGVRPSGFTFSILLS---TVSSACHGKQIHGSMIRSGLSLS 178
GV S FTF+ LLS V S G+QIH +++ GLS +
Sbjct: 471 --------------------GV--SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508
Query: 179 NVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMR 238
V N+LI MY K G + A VF ME ++ISW S+I+G G+ L+ F M
Sbjct: 509 QPVC-NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 239 YSGYSPDEYTISIVINACTKLRNLDKGKQVF 269
G P+E T +++AC+ + + +G + F
Sbjct: 568 EEGVKPNEVTYVAILSACSHVGLVSEGWRHF 598
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 5/145 (3%)
Query: 331 ALELFQLMLREDIRPTE-FTLSCVLSS-IPIPPVEHGSQFHSMAIKSGFDSNAVVASSLM 388
A+ LM R+ IRP + T S +L S I G H+ I+ + ++V+ +SL+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 389 EMYAKTGSIDSSTEIF---VKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPP 445
+Y+K+G + ++F + KRD+VSW+ +M NGR + + VF E LE GL P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 446 DRITLAAVLLACNYGGFVDKGMLVF 470
+ AV+ AC+ FV G +
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTL 189
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 315 bits (806), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 179/559 (32%), Positives = 310/559 (55%), Gaps = 9/559 (1%)
Query: 77 PQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFS 136
P+K+ I + + ++ A +FDE+P+ DVV+W +MI+GYAS Y+ A E F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 137 KMQLQGVRPSGFTFSILLSTVSSA---CHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKL 193
+M QG P+ FT S +L + + +G +HG +++ G+ S + + N++++MY
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGS-LYVDNAMMNMYATC 159
Query: 194 GV-LYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIV 252
V + A +F +++ + ++W +LI+G + G G L + M Y I+I
Sbjct: 160 SVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA 219
Query: 253 INACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDY 312
+ A + ++ GKQ+ A +K GF SN V+++ +DL+ +C L ++ F +++ D
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL 279
Query: 313 AVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSM 371
N +IS R E AL +FQ + P +T + ++++ I + G Q H
Sbjct: 280 ITWNTLISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 372 AIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKL-DKRDLVSWNTIMMGLTQNGRAAE 430
+ GF+ N +A++L++MYAK G+I S +F ++ D+R+LVSW ++M+G +G AE
Sbjct: 339 IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398
Query: 431 TLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACII 490
+++F++++ G+ PDRI AVL AC + G V+KG+ F+ M+ EYG+ P + Y C++
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 491 DLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAER-MMDLQLPSP 549
DLL +AG++G+A ++ MPF+P S W +IL A + L +A R +M+L+
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMV 518
Query: 550 LPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQ 609
Y +L+ YA G+W RV+K+MR G K G SWI ++N++++F +
Sbjct: 519 GTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNAS 578
Query: 610 KIYLVLRLLTWEMEDEGCV 628
+Y VL LL E + G V
Sbjct: 579 SVYSVLGLLIEETREAGYV 597
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 199/408 (48%), Gaps = 39/408 (9%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S ++ C + K + +HG + KLG Y+ N +++Y+
Sbjct: 115 SSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA----------------- 157
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
C S ++ A +F +I + V+W ++I+G+ G L+M+ +M
Sbjct: 158 -TC------------SVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQM 204
Query: 139 QLQGVRPSGFTFSILL---STVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGV 195
L+ + + +I + +++ S GKQIH S+I+ G SN+ + NS++D+Y + G
Sbjct: 205 LLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQ-SNLPVMNSILDLYCRCGY 263
Query: 196 LYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINA 255
L A F ME+ D+I+WN+LIS S E AL F G+ P+ YT + ++ A
Sbjct: 264 LSEAKHYFHEMEDKDLITWNTLISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAA 322
Query: 256 CTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLF-EQLDRWDYAV 314
C + L+ G+Q+ + GF N + +A ID+++KC + DS R+F E +DR +
Sbjct: 323 CANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVS 382
Query: 315 INVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPP-VEHGSQ-FHSMA 372
M+ YG +G+G A+ELF M+ IRP VLS+ VE G + F+ M
Sbjct: 383 WTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVME 442
Query: 373 IKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLD-KRDLVSWNTIM 419
+ G + + + + ++++ + G I + E+ ++ K D +W I+
Sbjct: 443 SEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 138/303 (45%), Gaps = 39/303 (12%)
Query: 11 NKASLSYCSQLIDRC-LSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDV 69
N YC + R S S K IH + K GF ++ + N LDLY R G +
Sbjct: 208 NAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEA 267
Query: 70 LQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSD 129
F E+ K+ I+WN + L +SD S
Sbjct: 268 KHYFHEMEDKDLITWNTLISELERSD--------------------------------SS 295
Query: 130 YALEMFSKMQLQGVRPSGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSL 186
AL MF + + QG P+ +TF+ L++ ++ G+Q+HG + R G + NV L N+L
Sbjct: 296 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN-KNVELANAL 354
Query: 187 IDMYGKLGVLYYAFGVFLNM-EELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPD 245
IDMY K G + + VF + + +++SW S++ G + GYG A++ F M SG PD
Sbjct: 355 IDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPD 414
Query: 246 EYTISIVINACTKLRNLDKGKQVF-ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLF 304
V++AC ++KG + F + + G + + + +DL + ++ ++ L
Sbjct: 415 RIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELV 474
Query: 305 EQL 307
E++
Sbjct: 475 ERM 477
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 310/543 (57%), Gaps = 9/543 (1%)
Query: 93 KSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFS---KMQLQGVRPSGFT 149
K+ ++ LKVF +PE + +W++M+SGYA+ G + A+++F+ + + +G S +
Sbjct: 165 KAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEG-SDSDYV 223
Query: 150 FSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNM 206
F+ +LS++++ + G+QIH I++GL L V L N+L+ MY K L A +F +
Sbjct: 224 FTAVLSSLAATIYVGLGRQIHCITIKNGL-LGFVALSNALVTMYSKCESLNEACKMFDSS 282
Query: 207 EELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGK 266
+ + I+W+++++G +G A+ F M +G P EYTI V+NAC+ + L++GK
Sbjct: 283 GDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGK 342
Query: 267 QVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYG 326
Q+ + +K+GF + +A +D+++K L D+ + F+ L D A+ +IS Y +
Sbjct: 343 QLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNS 402
Query: 327 FGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVAS 385
E AL L++ M I P + T++ VL + + +E G Q H IK GF + S
Sbjct: 403 DNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGS 462
Query: 386 SLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPP 445
+L MY+K GS++ +F + +D+VSWN ++ GL+ NG+ E L++FEE+L EG+ P
Sbjct: 463 ALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEP 522
Query: 446 DRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDI 505
D +T ++ AC++ GFV++G F+ M ++ G+ P +HYAC++DLL +AGQL +A +
Sbjct: 523 DDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEF 582
Query: 506 TSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRW 565
+ G +W +L A +G +L E++M L Y L+ Y GR
Sbjct: 583 IESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRM 642
Query: 566 EAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDE 625
+ RV K MR NG++K GCSWI +KN+ + F G+ H ++ ++ L++ +M +E
Sbjct: 643 RDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEE 702
Query: 626 GCV 628
G V
Sbjct: 703 GFV 705
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 203/383 (53%), Gaps = 10/383 (2%)
Query: 85 NICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCG--YSDYA-LEMFSKMQLQ 141
N+ + K L A +F+ I DVVSWNS+I+GY+ G S Y +++F +M+ Q
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 142 GVRPSGFTFSILL---STVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYY 198
+ P+ +T + + S++ S+ G+Q H +++ S ++ + SL+ MY K G++
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS-SFGDIYVDTSLVGMYCKAGLVED 171
Query: 199 AFGVFLNMEELDIISWNSLISGCFNSGYGELALDQF--YSMRYSGYSPDEYTISIVINAC 256
VF M E + +W++++SG G E A+ F + S +Y + V+++
Sbjct: 172 GLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSL 231
Query: 257 TKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVIN 316
+ G+Q+ +++K G L + +A + ++SKC L ++ ++F+ + +
Sbjct: 232 AATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWS 291
Query: 317 VMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKS 375
M++ Y + G A++LF M I+P+E+T+ VL++ I +E G Q HS +K
Sbjct: 292 AMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL 351
Query: 376 GFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVF 435
GF+ + ++L++MYAK G + + + F L +RD+ W +++ G QN E L ++
Sbjct: 352 GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY 411
Query: 436 EELLEEGLPPDRITLAAVLLACN 458
+ G+ P+ T+A+VL AC+
Sbjct: 412 RRMKTAGIIPNDPTMASVLKACS 434
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 197/417 (47%), Gaps = 40/417 (9%)
Query: 33 FAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLL 92
+ IH K G L N + +YS+ + ++ ++FD +N I+W+
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWS------- 291
Query: 93 KSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSI 152
+M++GY+ G S A+++FS+M G++PS +T
Sbjct: 292 ------------------------AMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327
Query: 153 LLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEEL 209
+L+ S C+ GKQ+H +++ G ++ +L+DMY K G L A F ++E
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFE-RHLFATTALVDMYAKAGCLADARKGFDCLQER 386
Query: 210 DIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVF 269
D+ W SLISG + E AL + M+ +G P++ T++ V+ AC+ L L+ GKQV
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446
Query: 270 ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGE 329
++K GF + SA ++SKC LED +F + D N MIS G G+
Sbjct: 447 GHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD 506
Query: 330 VALELFQLMLREDIRPTEFTLSCVLSSIPIPP-VEHG-SQFHSMAIKSGFDSNAVVASSL 387
ALELF+ ML E + P + T ++S+ VE G F+ M+ + G D + +
Sbjct: 507 EALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACM 566
Query: 388 MEMYAKTGSIDSSTEIFVKLDKRD--LVSWNTIMMGLTQNGRAAETLDVFEELLEEG 442
+++ ++ G + + E F++ D L W ++ +G+ + E+L+ G
Sbjct: 567 VDLLSRAGQLKEAKE-FIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALG 622
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 181/349 (51%), Gaps = 14/349 (4%)
Query: 163 GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCF 222
G+ +HG +IR+G S + + N L++ Y K G L A +F + D++SWNSLI+G
Sbjct: 33 GRAVHGQIIRTGAS-TCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYS 91
Query: 223 NSG---YGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLS 279
+G + F MR P+ YT++ + A + L++ G+Q AL VK+
Sbjct: 92 QNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFG 151
Query: 280 NSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLML 339
+ V ++ + ++ K +ED +++F + + + M+S Y G E A+++F L L
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL 211
Query: 340 R--EDIRPTEFTLSCVLSSIPIPP-VEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGS 396
R E+ +++ + VLSS+ V G Q H + IK+G ++++L+ MY+K S
Sbjct: 212 REKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES 271
Query: 397 IDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLA 456
++ + ++F R+ ++W+ ++ G +QNG + E + +F + G+ P T+ VL A
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNA 331
Query: 457 CNYGGFVDKGMLVFSAMKEEYGVMPGEEHY---ACIIDLLCQAGQLGKA 502
C+ ++++G + S + + + E H ++D+ +AG L A
Sbjct: 332 CSDICYLEEGKQLHSFLLK----LGFERHLFATTALVDMYAKAGCLADA 376
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 136/292 (46%), Gaps = 36/292 (12%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKN 80
+++ C + K +H L KLGF H + +D+Y++ G D + FD
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFD------ 381
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
CL+ E DV W S+ISGY ++ AL ++ +M+
Sbjct: 382 ------CLQ-------------------ERDVALWTSLISGYVQNSDNEEALILYRRMKT 416
Query: 141 QGVRPSGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLY 197
G+ P+ T + +L SS GKQ+HG I+ G L V +G++L MY K G L
Sbjct: 417 AGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGL-EVPIGSALSTMYSKCGSLE 475
Query: 198 YAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACT 257
VF D++SWN++ISG ++G G+ AL+ F M G PD+ T +I+AC+
Sbjct: 476 DGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACS 535
Query: 258 KLRNLDKGKQVF-ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLD 308
+++G F +S ++G + +DL S+ +L+++ E +
Sbjct: 536 HKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESAN 587
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 21/250 (8%)
Query: 243 SPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVR 302
+P T+ + ++ RNL G+ V ++ G + + ++ ++KC +L +
Sbjct: 11 NPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHS 70
Query: 303 LFEQLDRWDYAVINVMISTYGRYG---FGEVALELFQLMLREDIRPTEFTLSCVL---SS 356
+F + D N +I+ Y + G ++LF+ M +DI P +TL+ + SS
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESS 130
Query: 357 IPIPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWN 416
+ V G Q H++ +K + V +SL+ MY K G ++ ++F + +R+ +W+
Sbjct: 131 LQSSTV--GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188
Query: 417 TIMMGLTQNGRAAETLDVFEELL---EEGLPPDRITLAAV--LLACNYGGF--------V 463
T++ G GR E + VF L EEG D + A + L A Y G +
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITI 248
Query: 464 DKGMLVFSAM 473
G+L F A+
Sbjct: 249 KNGLLGFVAL 258
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
+ ++ C S + + K +HGH K GF +G+ +YS+ G+ +D +F P
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPN 486
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEI----PEPDVVSWNSMISGYASCGYSDYALEM 134
K+ +SWN + GL + D AL++F+E+ EPD V++ ++IS + G+ +
Sbjct: 487 KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFY 546
Query: 135 FSKMQLQ-GVRPSGFTFSILLSTVSSACHGKQ----IHGSMIRSGLSLSNVVLGNSLIDM 189
F+ M Q G+ P ++ ++ +S A K+ I + I GL L ++L S
Sbjct: 547 FNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILL--SACKN 604
Query: 190 YGKLGVLYYA 199
+GK + YA
Sbjct: 605 HGKCELGVYA 614
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 311 bits (796), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 314/595 (52%), Gaps = 34/595 (5%)
Query: 60 YSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMI 119
Y R G + +LFDE+P+++ +SWN+ ++G +++ NL A ++F+ +PE DV SWN+M+
Sbjct: 105 YLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTML 164
Query: 120 SGYASCGYSDYALEMFSKMQLQG-----------VRPSGFTFSILL-------STVSSAC 161
SGYA G D A +F +M + V+ S + +L + VS C
Sbjct: 165 SGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNC 224
Query: 162 -------HGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISW 214
K + +++ +VV N++I Y + G + A +F D+ +W
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTW 284
Query: 215 NSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVK 274
+++SG + E A + F M +E + + ++ + ++ K++F
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELF----D 336
Query: 275 VGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALEL 334
V N + I +++C ++ ++ LF+++ + D MI+ Y + G AL L
Sbjct: 337 VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRL 396
Query: 335 FQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAK 393
F M RE R + S LS+ + +E G Q H +K G+++ V ++L+ MY K
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456
Query: 394 TGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAV 453
GSI+ + ++F ++ +D+VSWNT++ G +++G L FE + EGL PD T+ AV
Sbjct: 457 CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 454 LLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQP 513
L AC++ G VDKG F M ++YGVMP +HYAC++DLL +AG L A ++ MPF+P
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576
Query: 514 GCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKK 573
+IW ++L AS ++G+ +L E A+++ ++ + Y LL+ YA GRW + +++
Sbjct: 577 DAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRV 636
Query: 574 VMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDEGCV 628
MR G+ KV G SWI I+N+ +TF+ G+ H +I+ L L M+ G V
Sbjct: 637 RMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 691
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 208/456 (45%), Gaps = 43/456 (9%)
Query: 84 WNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGV 143
WN+ + +++ + AL+VF +P VS+N MISGY G + A ++F +M + +
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 144 RPSGFTFSILLST-VSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGV 202
++++++ V + GK I + +V N+++ Y + G + A V
Sbjct: 127 ----VSWNVMIKGYVRNRNLGKARELFEI---MPERDVCSWNTMLSGYAQNGCVDDARSV 179
Query: 203 FLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNL 262
F M E + +SWN+L+S + E A F S + + ++ K + +
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKI 235
Query: 263 DKGKQVF-ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMIST 321
+ +Q F +++V+ N+I+ +++ +++++ +LF++ D M+S
Sbjct: 236 VEARQFFDSMNVRDVVSWNTIITG-----YAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290
Query: 322 YGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSS-IPIPPVEHGSQ-FHSMAIKSGFDS 379
Y + E A ELF M + E + + +L+ + +E + F M +
Sbjct: 291 YIQNRMVEEARELFDKMPERN----EVSWNAMLAGYVQGERMEMAKELFDVMPCR----- 341
Query: 380 NAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELL 439
N ++++ YA+ G I + +F K+ KRD VSW ++ G +Q+G + E L +F ++
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 440 EEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYG-VMPGEEHYACIID-----LL 493
EG +R + ++ L C ++ K+ +G ++ G C + +
Sbjct: 402 REGGRLNRSSFSSALSTC-------ADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 454
Query: 494 CQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYG 529
C+ G + +A D+ M + S W +++ + +G
Sbjct: 455 CKCGSIEEANDLFKEMAGKDIVS-WNTMIAGYSRHG 489
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 41/237 (17%)
Query: 8 AHVNKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSD 67
+N++S S + C + + K +HG L K G+ ++GN L +Y + G+ +
Sbjct: 405 GRLNRSSFS---SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461
Query: 68 DVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGY 127
+ LF E+ K+ +SW N+MI+GY+ G+
Sbjct: 462 EANDLFKEMAGKDIVSW-------------------------------NTMIAGYSRHGF 490
Query: 128 SDYALEMFSKMQLQGVRPSGFTFSILLSTVSSAC---HGKQIHGSMIRSGLSLSNVVLGN 184
+ AL F M+ +G++P T +LS S G+Q +M + + N
Sbjct: 491 GEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYA 550
Query: 185 SLIDMYGKLGVLYYAFGVFLNME-ELDIISWNSLISGCF---NSGYGELALDQFYSM 237
++D+ G+ G+L A + NM E D W +L+ N+ E A D+ ++M
Sbjct: 551 CMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAM 607
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 17/170 (10%)
Query: 399 SSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACN 458
S T+ +K D+ WN + + GR E L VF+ + ++V
Sbjct: 51 SQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPR---------WSSVSYNGM 101
Query: 459 YGGFVDKGMLVFSAMKEEYGVMPGEE--HYACIIDLLCQAGQLGKAIDITSTMPFQPGCS 516
G++ G F ++ + MP + + +I + LGKA ++ MP + CS
Sbjct: 102 ISGYLRNGE--FELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCS 159
Query: 517 IWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWE 566
W ++L A G V +V +RM + + + ++ L AY + E
Sbjct: 160 -WNTMLSGYAQNGCVDDARSVFDRMPE---KNDVSWNALLSAYVQNSKME 205
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 310 bits (793), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/547 (31%), Positives = 292/547 (53%), Gaps = 6/547 (1%)
Query: 85 NICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVR 144
N+ L+ + LD A +F+EIPE D V++N++I+GY G ++ +F KM+ G +
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 145 PSGFTFSILLSTV---SSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFG 201
PS FTFS +L V G+Q+H + +G S + +GN ++D Y K +
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS-RDASVGNQILDFYSKHDRVLETRM 306
Query: 202 VFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRN 261
+F M ELD +S+N +IS + E +L F M+ G+ + + +++ L +
Sbjct: 307 LFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSS 366
Query: 262 LDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMIST 321
L G+Q+ ++ S V ++ +D+++KC E++ +F+ L + +IS
Sbjct: 367 LQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISG 426
Query: 322 YGRYGFGEVALELFQLMLREDIRPTEFTLSCVL-SSIPIPPVEHGSQFHSMAIKSGFDSN 380
Y + G L+LF M ++R + T + VL +S + G Q H+ I+SG N
Sbjct: 427 YVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLEN 486
Query: 381 AVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLE 440
S L++MYAK GSI + ++F ++ R+ VSWN ++ NG + F +++E
Sbjct: 487 VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Query: 441 EGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLG 500
GL PD +++ VL AC++ GFV++G F AM YG+ P ++HYAC++DLL + G+
Sbjct: 547 SGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFA 606
Query: 501 KAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQ-LPSPLPYSLLTQAY 559
+A + MPF+P +W S+L A I+ + L E AE++ ++ L Y ++ Y
Sbjct: 607 EAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIY 666
Query: 560 AMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLT 619
A G WE + VKK MR+ GI KV SW+ + ++I+ F++ + H G +I + LT
Sbjct: 667 AAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELT 726
Query: 620 WEMEDEG 626
E+E EG
Sbjct: 727 AEIEREG 733
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 145/538 (26%), Positives = 256/538 (47%), Gaps = 13/538 (2%)
Query: 1 MSSYLKKAHVNKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLY 60
M Y V +L+ QL R S +F + + + K GF+ T N ++
Sbjct: 1 MKLYCNSNEVRSRTLATLRQL--RQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDL 58
Query: 61 SRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMIS 120
R G +++DE+P KN +S N + G +K+ ++ +A +FD +P+ VV+W ++
Sbjct: 59 LRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMG 118
Query: 121 GYASCGYSDYALEMFSKMQLQG--VRPSGFTFSILLSTVSSACHGK---QIHGSMIRSGL 175
YA + D A ++F +M P TF+ LL + A Q+H ++ G
Sbjct: 119 WYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGF 178
Query: 176 SLSN-VVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQF 234
+ + + N L+ Y ++ L A +F + E D +++N+LI+G G ++ F
Sbjct: 179 DTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLF 238
Query: 235 YSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKC 294
MR SG+ P ++T S V+ A L + G+Q+ ALSV GF ++ V + +D +SK
Sbjct: 239 LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKH 298
Query: 295 NRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVL 354
+R+ ++ LF+++ D+ NV+IS+Y + E +L F+ M F + +L
Sbjct: 299 DRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
Query: 355 S-SIPIPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLV 413
S + + ++ G Q H A+ + DS V +SL++MYAK + + IF L +R V
Sbjct: 359 SIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTV 418
Query: 414 SWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLA-CNYGGFVDKGMLVFSA 472
SW ++ G Q G L +F ++ L D+ T A VL A ++ + L A
Sbjct: 419 SWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQL--HA 476
Query: 473 MKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGD 530
G + + ++D+ + G + A+ + MP + S W +++ A A GD
Sbjct: 477 FIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISAHADNGD 533
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 308 bits (790), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 210/682 (30%), Positives = 333/682 (48%), Gaps = 99/682 (14%)
Query: 2 SSYLKKAHVNKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGF-NAHTYLGNRCLDLY 60
SS+L+ V+ Y +L+ C S + +G L K GF ++ + N L +Y
Sbjct: 15 SSFLQAMEVD--CRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMY 72
Query: 61 SRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMIS 120
SR G LFDE+P +N SWN + G + S T+L+ FD +PE D SWN ++S
Sbjct: 73 SRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVS 132
Query: 121 GYASCGYSDYALEMFSKMQ----------LQGVRPSGF-----------TFS---ILLST 156
G+A G A +F+ M L G +G+ FS I L+T
Sbjct: 133 GFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTT 192
Query: 157 VSSACH-------GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEEL 209
V AC GKQIH ++ G+ + + +SL+++Y K G L A + + E
Sbjct: 193 VLKACAELEALKCGKQIHAQILIGGVECDSK-MNSSLVNVYAKCGDLRMASYMLEQIREP 251
Query: 210 D-------------------------------IISWNSLISGCFNSGYGELALDQFYSMR 238
D +I WNS+ISG + AL F MR
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR 311
Query: 239 YSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLE 298
+ D T++ VINAC L L+ GKQ+ + K G + + +V S +D++SKC
Sbjct: 312 -NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPM 370
Query: 299 DSVRLFEQLDRWDYAVINVMISTY---GRY-----------------------GFGE--- 329
++ +LF +++ +D ++N MI Y GR GF +
Sbjct: 371 EACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGC 430
Query: 330 --VALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASS 386
LE F M + D+ E +LS V+S+ I +E G Q + A G DS+ VV+SS
Sbjct: 431 TVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSS 490
Query: 387 LMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPD 446
L+++Y K G ++ +F + K D V WN+++ G NG+ E +D+F+++ G+ P
Sbjct: 491 LIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPT 550
Query: 447 RITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDIT 506
+IT VL ACNY G V++G +F +MK ++G +P +EH++C++DLL +AG + +AI++
Sbjct: 551 QITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLV 610
Query: 507 STMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWE 566
MPF S+W SILR G + + AE++++L+ + + Y L+ +A G WE
Sbjct: 611 EEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWE 670
Query: 567 AIVRVKKVMRKNGINKVTGCSW 588
+ V+K+MR+N + K G SW
Sbjct: 671 SSALVRKLMRENNVTKNPGSSW 692
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 314/612 (51%), Gaps = 36/612 (5%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKN 80
L+ C K IHG L K GF+ LDL++ G + ++ + Q N
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFS---------LDLFAMTGLEN----MYAKCRQVN 187
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
A KVFD +PE D+VSWN++++GY+ G + ALEM M
Sbjct: 188 ------------------EARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229
Query: 141 QGVRPSGFTFSILLSTVSS---ACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLY 197
+ ++PS T +L VS+ GK+IHG +RSG S V + +L+DMY K G L
Sbjct: 230 ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD-SLVNISTALVDMYAKCGSLE 288
Query: 198 YAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACT 257
A +F M E +++SWNS+I + + A+ F M G P + ++ ++AC
Sbjct: 289 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 348
Query: 258 KLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINV 317
L +L++G+ + LSV++G N V+++ I ++ KC ++ + +F +L N
Sbjct: 349 DLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNA 408
Query: 318 MISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPPVEHGSQF-HSMAIKSG 376
MI + + G AL F M ++P FT V+++I + H +++ H + ++S
Sbjct: 409 MILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC 468
Query: 377 FDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFE 436
D N V ++L++MYAK G+I + IF + +R + +WN ++ G +G L++FE
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 528
Query: 437 ELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQA 496
E+ + + P+ +T +V+ AC++ G V+ G+ F MKE Y + +HY ++DLL +A
Sbjct: 529 EMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRA 588
Query: 497 GQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLT 556
G+L +A D MP +P +++ ++L A I+ +V E AER+ +L + LL
Sbjct: 589 GRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLA 648
Query: 557 QAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLR 616
Y WE + +V+ M + G+ K GCS + IKN +++F +G H +KIY L
Sbjct: 649 NIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLE 708
Query: 617 LLTWEMEDEGCV 628
L +++ G V
Sbjct: 709 KLICHIKEAGYV 720
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 217/440 (49%), Gaps = 39/440 (8%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKN 80
L++RC S K + I +FK G + + + L+ R+G+ D+ ++F+ I K
Sbjct: 43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
+ ++ L+G K +LD AL+ F +M+
Sbjct: 100 NVLYHTMLKGFAKVSDLDK-------------------------------ALQFFVRMRY 128
Query: 141 QGVRPSGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLY 197
V P + F+ LL GK+IHG +++SG SL ++ L +MY K +
Sbjct: 129 DDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL-DLFAMTGLENMYAKCRQVN 187
Query: 198 YAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACT 257
A VF M E D++SWN++++G +G +AL+ SM P TI V+ A +
Sbjct: 188 EARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVS 247
Query: 258 KLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINV 317
LR + GK++ +++ GF S + +A +D+++KC LE + +LF+ + + N
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 318 MISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSG 376
MI Y + + A+ +FQ ML E ++PT+ ++ L + + +E G H ++++ G
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 367
Query: 377 FDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFE 436
D N V +SL+ MY K +D++ +F KL R LVSWN +++G QNGR + L+ F
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 437 ELLEEGLPPDRITLAAVLLA 456
++ + PD T +V+ A
Sbjct: 428 QMRSRTVKPDTFTYVSVITA 447
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 190/360 (52%), Gaps = 7/360 (1%)
Query: 151 SILLSTVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELD 210
++LL SS +QI + ++GL + L+ ++ + G + A VF ++
Sbjct: 41 ALLLERCSSLKELRQILPLVFKNGLYQEHF-FQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 211 IISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFA 270
+ +++++ G + AL F MRY P Y + ++ C L GK++
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 271 LSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEV 330
L VK GF + ++ ++++KC ++ ++ ++F+++ D N +++ Y + G +
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 331 ALELFQLMLREDIRPTEFTLSCVLSSI-PIPPVEHGSQFHSMAIKSGFDSNAVVASSLME 389
ALE+ + M E+++P+ T+ VL ++ + + G + H A++SGFDS ++++L++
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 390 MYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRIT 449
MYAK GS++++ ++F + +R++VSWN+++ QN E + +F+++L+EG+ P ++
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 450 LAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTM 509
+ L AC G +++G + + E G+ +I + C+ K +D ++M
Sbjct: 340 VMGALHACADLGDLERGRFIHK-LSVELGLDRNVSVVNSLISMYCKC----KEVDTAASM 394
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 143/300 (47%), Gaps = 8/300 (2%)
Query: 246 EYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFE 305
E+ ++++ C+ L+ L +Q+ L K G + + LF + ++++ R+FE
Sbjct: 37 EHPAALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFE 93
Query: 306 QLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSI-PIPPVEH 364
+D + + M+ + + + AL+ F M +D+ P + + +L +
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 365 GSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQ 424
G + H + +KSGF + + L MYAK ++ + ++F ++ +RDLVSWNTI+ G +Q
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 425 NGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFS-AMKEEYGVMPGE 483
NG A L++ + + EE L P IT+ +VL A + + G + AM+ + +
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 484 EHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMD 543
++D+ + G L A + M + W S++ A + K + ++M+D
Sbjct: 274 S--TALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 307 bits (787), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 193/644 (29%), Positives = 327/644 (50%), Gaps = 72/644 (11%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDL--YSRFGTSDDVLQLFDEIPQ 78
LI+RC+S + K HGH+ + G + Y ++ + S F + + ++FDEIP+
Sbjct: 36 LIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
N +WN T ++ + P+P + W L+M S+
Sbjct: 93 PNSFAWN-------------TLIRAYASGPDPVLSIW--------------AFLDMVSES 125
Query: 139 QLQGVRPSGFTFSILL---STVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGV 195
Q P+ +TF L+ + VSS G+ +HG ++S + S+V + NSLI Y G
Sbjct: 126 Q---CYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG-SDVFVANSLIHCYFSCGD 181
Query: 196 LYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINA 255
L A VF ++E D++SWNS+I+G G + AL+ F M T+ V++A
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 256 CTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWD---- 311
C K+RNL+ G+QV + + N + +A +D+++KC +ED+ RLF+ ++ D
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 312 ------YAVI---------------------NVMISTYGRYGFGEVALELF-QLMLREDI 343
YA+ N +IS Y + G AL +F +L L++++
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 344 RPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTE 402
+ + TL LS+ + +E G HS K G N V S+L+ MY+K G ++ S E
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 403 IFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGF 462
+F ++KRD+ W+ ++ GL +G E +D+F ++ E + P+ +T V AC++ G
Sbjct: 422 VFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481
Query: 463 VDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESIL 522
VD+ +F M+ YG++P E+HYACI+D+L ++G L KA+ MP P S+W ++L
Sbjct: 482 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Query: 523 RASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINK 582
A I+ ++ L E R+++L+ + + LL+ YA G+WE + ++K MR G+ K
Sbjct: 542 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKK 601
Query: 583 VTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDEG 626
GCS I I I+ F +G+ H +K+Y L + +++ G
Sbjct: 602 EPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNG 645
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 157/303 (51%), Gaps = 10/303 (3%)
Query: 12 KASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQ 71
KAS ++ C ++ +F + + ++ + N + L N LD+Y++ G+ +D +
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 72 LFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYA 131
LFD + +K+ ++W L G S++ + A +V + +P+ D+V+WN++IS Y G + A
Sbjct: 289 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Query: 132 LEMFSKMQLQGVRPSGFTFSILLSTVSSACH------GKQIHGSMIRSGLSLSNVVLGNS 185
L +F ++QLQ + L+ST+S+ G+ IH + + G+ + N + ++
Sbjct: 349 LIVFHELQLQ--KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRM-NFHVTSA 405
Query: 186 LIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPD 245
LI MY K G L + VF ++E+ D+ W+++I G G G A+D FY M+ + P+
Sbjct: 406 LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
Query: 246 EYTISIVINACTKLRNLDKGKQVF-ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLF 304
T + V AC+ +D+ + +F + G + + +D+ + LE +V+
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525
Query: 305 EQL 307
E +
Sbjct: 526 EAM 528
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 193/618 (31%), Positives = 320/618 (51%), Gaps = 43/618 (6%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKN 80
+I S + K IH + KLGF + Y+ N + LY + G + D
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD------------ 183
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
A KVF+E+PE D+VSWNSMISGY + G +L +F +M
Sbjct: 184 -------------------AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLK 224
Query: 141 QGVRPSGF-TFSIL--LSTVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLY 197
G +P F T S L S V S GK+IH +RS + +V++ S++DMY K G +
Sbjct: 225 CGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVS 284
Query: 198 YAFGVFLNMEELDIISWNSLISGCF-NSGYGELALDQFYSM-RYSGYSPDEYTISIVINA 255
YA +F M + +I++WN +I GC+ +G A F M +G PD T ++ A
Sbjct: 285 YAERIFNGMIQRNIVAWNVMI-GCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA 343
Query: 256 CTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVI 315
L +G+ + +++ GFL + ++ +A ID++ +C +L+ + +F+++ +
Sbjct: 344 SAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISW 399
Query: 316 NVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIP-PVEHGSQFHSMAIK 374
N +I+ Y + G ALELFQ + + P T++ +L + + G + H+ +K
Sbjct: 400 NSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK 459
Query: 375 SGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDV 434
S + SN ++ +SL+ MYA G ++ + + F + +D+VSWN+I+M +G ++ +
Sbjct: 460 SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWL 519
Query: 435 FEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLC 494
F E++ + P++ T A++L AC+ G VD+G F +MK EYG+ PG EHY C++DL+
Sbjct: 520 FSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIG 579
Query: 495 QAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSL 554
+ G A MPF P IW S+L AS + D+ + E AE++ ++ + Y L
Sbjct: 580 RTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVL 639
Query: 555 LTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLV 614
L YA GRWE + R+K +M GI++ + S + K + + F G+ H KIY V
Sbjct: 640 LLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEV 699
Query: 615 LRLLTWEMEDEGCVYLEC 632
L +++ M E +Y+ C
Sbjct: 700 LDVVS-RMVGEEDIYVHC 716
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 210/374 (56%), Gaps = 9/374 (2%)
Query: 88 LRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSG 147
LRG S ++ AL++FDE+ + D WN MI G+ SCG A++ +S+M GV+
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 148 FTFSILLSTV---SSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFL 204
FT+ ++ +V SS GK+IH +I+ G +S+V + NSLI +Y KLG + A VF
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGF-VSDVYVCNSLISLYMKLGCAWDAEKVFE 189
Query: 205 NMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDK 264
M E DI+SWNS+ISG G G +L F M G+ PD ++ + AC+ + +
Sbjct: 190 EMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKM 249
Query: 265 GKQVFALSVKVGFLSNSI-VLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYG 323
GK++ +V+ + + V+++ +D++SK + + R+F + + + NVMI Y
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309
Query: 324 RYGFGEVALELFQLMLRED-IRPTEFTLSCVLSSIPIPPVEHGSQFHSMAIKSGFDSNAV 382
R G A FQ M ++ ++P T ++ +P + G H A++ GF + V
Sbjct: 310 RNGRVTDAFLCFQKMSEQNGLQPDVIT---SINLLPASAILEGRTIHGYAMRRGFLPHMV 366
Query: 383 VASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEG 442
+ ++L++MY + G + S+ IF ++ +++++SWN+I+ QNG+ L++F+EL +
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 443 LPPDRITLAAVLLA 456
L PD T+A++L A
Sbjct: 427 LVPDSTTIASILPA 440
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 185/367 (50%), Gaps = 12/367 (3%)
Query: 199 AFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYS-MRYSGYSPDEYTISIVINACT 257
A +F M + D WN +I G + G A+ QFYS M ++G D +T VI +
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAV-QFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 258 KLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINV 317
+ +L++GK++ A+ +K+GF+S+ V ++ I L+ K D+ ++FE++ D N
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 318 MISTYGRYGFGEVALELFQLMLREDIRPTEF-TLSCVLSSIPIPPVEHGSQFHSMAIKSG 376
MIS Y G G +L LF+ ML+ +P F T+S + + + + G + H A++S
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 377 FDS-NAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVF 435
++ + +V +S+++MY+K G + + IF + +R++V+WN ++ +NGR + F
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 436 EELLEE-GLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLC 494
+++ E+ GL PD IT +L A ++ + AM+ G +P +ID+
Sbjct: 322 QKMSEQNGLQPDVITSINLLPA---SAILEGRTIHGYAMRR--GFLPHMVLETALIDMYG 376
Query: 495 QAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQL-PSPLPYS 553
+ GQL A I M + S W SI+ A G + + + D L P +
Sbjct: 377 ECGQLKSAEVIFDRMAEKNVIS-WNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 554 LLTQAYA 560
+ AYA
Sbjct: 436 SILPAYA 442
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 150/309 (48%), Gaps = 37/309 (11%)
Query: 274 KVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALE 333
KV N L+ + F+ +ED+++LF+++++ D + NVMI + G A++
Sbjct: 57 KVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQ 116
Query: 334 LFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYA 392
+ M+ ++ FT V+ S+ I +E G + H+M IK GF S+ V +SL+ +Y
Sbjct: 117 FYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYM 176
Query: 393 KTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAA 452
K G + ++F ++ +RD+VSWN+++ G G +L +F+E+L+ G PDR + +
Sbjct: 177 KLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMS 236
Query: 453 VLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQ 512
L AC++ V+S M E H C A + I+ M
Sbjct: 237 ALGACSH---------VYSPK------MGKEIH--------CHA--VRSRIETGDVM--- 268
Query: 513 PGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGR-WEAIVRV 571
+ SIL + YG+V E + M+ + + ++++ YA GR +A +
Sbjct: 269 ----VMTSILDMYSKYGEVSYAERIFNGMIQRNI---VAWNVMIGCYARNGRVTDAFLCF 321
Query: 572 KKVMRKNGI 580
+K+ +NG+
Sbjct: 322 QKMSEQNGL 330
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 193/639 (30%), Positives = 333/639 (52%), Gaps = 57/639 (8%)
Query: 5 LKKAHVNKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFG 64
+K A V + +Y + L C+ + F + + K G + +GN + +YSR G
Sbjct: 165 MKSAGVVFDAFTYSTAL-SFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSG 223
Query: 65 TSDDVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYAS 124
+ RG A +VFDE+ D++SWNS++SG +
Sbjct: 224 S----------------------FRG---------ARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 125 CGYSDY-ALEMFSKMQLQGVRPSGFTFSILLSTVSSACH------GKQIHGSMIRSGLSL 177
G + A+ +F M +GV +F+ S +++ CH +QIHG I+ G
Sbjct: 253 EGTFGFEAVVIFRDMMREGVELDHVSFT---SVITTCCHETDLKLARQIHGLCIKRGYE- 308
Query: 178 SNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSM 237
S + +GN L+ Y K GVL VF M E +++SW ++IS + A+ F +M
Sbjct: 309 SLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSIFLNM 363
Query: 238 RYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRL 297
R+ G P+E T +INA + +G ++ L +K GF+S V ++ I L++K L
Sbjct: 364 RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEAL 423
Query: 298 EDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSI 357
ED+ + FE + + N MIS + + GF AL++F L + P E+T VL++I
Sbjct: 424 EDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF-LSAAAETMPNEYTFGSVLNAI 482
Query: 358 PIP---PVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVS 414
V+ G + H+ +K G +S VV+S+L++MYAK G+ID S ++F ++ +++
Sbjct: 483 AFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFV 542
Query: 415 WNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMK 474
W +I+ + +G +++F ++++E + PD +T +VL ACN G VDKG +F+ M
Sbjct: 543 WTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMI 602
Query: 475 EEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLT 534
E Y + P EHY+C++D+L +AG+L +A ++ S +P PG S+ +S+L + ++G+VK+
Sbjct: 603 EVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMG 662
Query: 535 ENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKN- 593
VAE M+++ Y + YA + W+ ++K MRK ++K G SWI + +
Sbjct: 663 AKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDT 722
Query: 594 ----RIYTFNAGELQHHGGQKIYLVLRLLTWEMEDEGCV 628
+ F++G+ H +IY ++ ++ EM EG V
Sbjct: 723 EGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGKV 761
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 234/490 (47%), Gaps = 46/490 (9%)
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
C+S N + K+ D AL +F+ + +PDVVSWN+++SG+ + AL +M+
Sbjct: 112 CVS-NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD---NQIALNFVVRMKS 167
Query: 141 QGVRPSGFTFSILLS-TVSSACH--GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLY 197
GV FT+S LS V S G Q+ +++++GL S++V+GNS I MY + G
Sbjct: 168 AGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLE-SDLVVGNSFITMYSRSGSFR 226
Query: 198 YAFGVFLNMEELDIISWNSLISGCFNSG-YGELALDQFYSMRYSGYSPDEYTISIVINAC 256
A VF M D+ISWNSL+SG G +G A+ F M G D + + VI C
Sbjct: 227 GARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC 286
Query: 257 TKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVIN 316
+L +Q+ L +K G+ S V + + +SKC LE +F Q+ +
Sbjct: 287 CHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWT 346
Query: 317 VMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPI-PPVEHGSQFHSMAIKS 375
MIS+ + A+ +F M + + P E T +++++ ++ G + H + IK+
Sbjct: 347 TMISSN-----KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKT 401
Query: 376 GFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVF 435
GF S V +S + +YAK +++ + + F + R+++SWN ++ G QNG + E L +F
Sbjct: 402 GFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF 461
Query: 436 EELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYA-------- 487
E + P+ T +VL A A E+ V G+ +A
Sbjct: 462 LSAAAETM-PNEYTFGSVLNAI--------------AFAEDISVKQGQRCHAHLLKLGLN 506
Query: 488 -------CIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAER 540
++D+ + G + ++ + + M Q +W SI+ A + +GD + N+ +
Sbjct: 507 SCPVVSSALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFETVMNLFHK 565
Query: 541 MMDLQLPSPL 550
M+ + L
Sbjct: 566 MIKENVAPDL 575
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 113/221 (51%), Gaps = 7/221 (3%)
Query: 239 YSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLE 298
Y G DE T+ + + AC +L +G Q+ S GF S V +A + ++ K R +
Sbjct: 71 YFGRHMDEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFD 128
Query: 299 DSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLS-SI 357
+++ +FE L D N ++S + ++AL M + FT S LS +
Sbjct: 129 NALCIFENLVDPDVVSWNTILSGFDD---NQIALNFVVRMKSAGVVFDAFTYSTALSFCV 185
Query: 358 PIPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNT 417
G Q S +K+G +S+ VV +S + MY+++GS + +F ++ +D++SWN+
Sbjct: 186 GSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNS 245
Query: 418 IMMGLTQNGR-AAETLDVFEELLEEGLPPDRITLAAVLLAC 457
++ GL+Q G E + +F +++ EG+ D ++ +V+ C
Sbjct: 246 LLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC 286
>sp|Q9SUF9|PP305_ARATH Pentatricopeptide repeat-containing protein At4g08210
OS=Arabidopsis thaliana GN=PCMP-E100 PE=3 SV=1
Length = 686
Score = 303 bits (776), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 300/579 (51%), Gaps = 12/579 (2%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S ++ C ++ + K L N +D+Y + G + F EI +
Sbjct: 111 SAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILR 170
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
+ SWN + G K+ +D A+ +F +P+P+VVSWN +ISG+ G S ALE +M
Sbjct: 171 PSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRM 229
Query: 139 QLQGVRPSGFTFSILLSTVSSA---CHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGV 195
Q +G+ GF L S GKQ+H +++SGL S + ++LIDMY G
Sbjct: 230 QREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAI-SALIDMYSNCGS 288
Query: 196 LYYAFGVFLNMEELDIIS----WNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISI 251
L YA VF + E+L + S WNS++SG + E AL + S D YT+S
Sbjct: 289 LIYAADVF-HQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSG 347
Query: 252 VINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWD 311
+ C NL G QV +L V G+ + IV S +DL + ++D+ +LF +L D
Sbjct: 348 ALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKD 407
Query: 312 YAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHS 370
+ +I + GF +A LF+ +++ + +F +S +L + + G Q H
Sbjct: 408 IIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHG 467
Query: 371 MAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAE 430
+ IK G++S V A++L++MY K G ID+ +F + +RD+VSW I++G QNGR E
Sbjct: 468 LCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEE 527
Query: 431 TLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACII 490
F +++ G+ P+++T +L AC + G +++ MK EYG+ P EHY C++
Sbjct: 528 AFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVV 587
Query: 491 DLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPL 550
DLL QAG +A ++ + MP +P +IW S+L A + + L +AE+++ P
Sbjct: 588 DLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPS 647
Query: 551 PYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWI 589
Y+ L+ AYA G W+ + +V++ +K G K +G SWI
Sbjct: 648 VYTSLSNAYATLGMWDQLSKVREAAKKLGA-KESGMSWI 685
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 216/478 (45%), Gaps = 76/478 (15%)
Query: 22 IDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNC 81
+ C ++F ++I H+ K G + + ++ N + +Y F D ++FDE+ ++N
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERN- 70
Query: 82 ISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQ 141
+V+W +M+SGY S G + A+E++ +M L
Sbjct: 71 ------------------------------IVTWTTMVSGYTSDGKPNKAIELYRRM-LD 99
Query: 142 GVRPSGFTFSILLSTVSSACH--GKQIHGSMIRSGLSLSN----VVLGNSLIDMY---GK 192
+ F + S V AC G G ++ + N VVL NS++DMY G+
Sbjct: 100 SEEEAANEF--MYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGR 157
Query: 193 L----------------------------GVLYYAFGVFLNMEELDIISWNSLISGCFNS 224
L G++ A +F M + +++SWN LISG +
Sbjct: 158 LIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDK 217
Query: 225 GYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVL 284
G AL+ M+ G D + + + AC+ L GKQ+ VK G S+ +
Sbjct: 218 G-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAI 276
Query: 285 SATIDLFSKCNRLEDSVRLFEQLD---RWDYAVINVMISTYGRYGFGEVALELFQLMLRE 341
SA ID++S C L + +F Q AV N M+S + E AL L + +
Sbjct: 277 SALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQS 336
Query: 342 DIRPTEFTLSCVLS-SIPIPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSS 400
D+ +TLS L I + G Q HS+ + SG++ + +V S L++++A G+I +
Sbjct: 337 DLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDA 396
Query: 401 TEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACN 458
++F +L +D+++++ ++ G ++G + +F EL++ GL D+ ++ +L C+
Sbjct: 397 HKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCS 454
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 129/313 (41%), Gaps = 37/313 (11%)
Query: 245 DEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLF 304
D I+ + C K++ +G+ + A +K G N + + I ++ L D+ ++F
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 305 EQLDRWDYAVINVMISTYGRYGFGEVALELFQLML-REDIRPTEFTLSCVLSSIP-IPPV 362
+++ + M+S Y G A+EL++ ML E+ EF S VL + + +
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 363 EHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSI------------------------- 397
+ G + K + V+ +S+++MY K G +
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 398 ------DSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLA 451
D + +F ++ + ++VSWN ++ G G + L+ + EGL D L
Sbjct: 184 CKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALP 242
Query: 452 AVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDI--TSTM 509
L AC++GG + G + + + G+ + +ID+ G L A D+ +
Sbjct: 243 CGLKACSFGGLLTMGKQLHCCVVKS-GLESSPFAISALIDMYSNCGSLIYAADVFHQEKL 301
Query: 510 PFQPGCSIWESIL 522
++W S+L
Sbjct: 302 AVNSSVAVWNSML 314
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 104/222 (46%), Gaps = 10/222 (4%)
Query: 359 IPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTI 418
+ + G + IK G N +A++++ MY + + ++F ++ +R++V+W T+
Sbjct: 18 VQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTM 77
Query: 419 MMGLTQNGRAAETLDVFEELLE-EGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEY 477
+ G T +G+ + ++++ +L+ E + +AVL AC G + G+LV+ + +E
Sbjct: 78 VSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKE- 136
Query: 478 GVMPGEEHYACIIDLLCQAGQLGKAIDITSTMP--FQPGCSIWESILRASAIYGDVKLTE 535
+ ++D+ + G+L I+ S+ +P + W +++ Y L +
Sbjct: 137 NLRGDVVLMNSVVDMYVKNGRL---IEANSSFKEILRPSSTSWNTLISG---YCKAGLMD 190
Query: 536 NVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRK 577
+ P+ + ++ L + +G A+ + ++ R+
Sbjct: 191 EAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQRE 232
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 302 bits (774), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 161/535 (30%), Positives = 293/535 (54%), Gaps = 8/535 (1%)
Query: 100 ALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLSTVSS 159
A +VFD++P P + WN++I GY+ + AL M+S MQL V P FTF LL S
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 160 ACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVF--LNMEELDIISW 214
H G+ +H + R G ++V + N LI +Y K L A VF L + E I+SW
Sbjct: 132 LSHLQMGRFVHAQVFRLGFD-ADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 215 NSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVK 274
+++S +G AL+ F MR PD + V+NA T L++L +G+ + A VK
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 275 VGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALEL 334
+G +L + +++KC ++ + LF+++ + + N MIS Y + G+ A+++
Sbjct: 251 MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 335 FQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAK 393
F M+ +D+RP +++ +S+ + +E + +S + + ++S+L++M+AK
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 394 TGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAV 453
GS++ + +F + RD+V W+ +++G +GRA E + ++ + G+ P+ +T +
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 454 LLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQP 513
L+ACN+ G V +G F+ M + + + P ++HYAC+IDLL +AG L +A ++ MP QP
Sbjct: 431 LMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 514 GCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKK 573
G ++W ++L A + V+L E A+++ + + Y L+ YA W+ + V+
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRV 549
Query: 574 VMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDEGCV 628
M++ G+NK GCSW+ ++ R+ F G+ H ++I + + +++ G V
Sbjct: 550 RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 604
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 171/328 (52%), Gaps = 5/328 (1%)
Query: 142 GVRPSGFTFSILLSTVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFG 201
G+ F ++ L+ + + KQIH ++ GL S ++ LI G + +A
Sbjct: 17 GIHSDSF-YASLIDSATHKAQLKQIHARLLVLGLQFSGFLI-TKLIHASSSFGDITFARQ 74
Query: 202 VFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRN 261
VF ++ I WN++I G + + + AL + +M+ + SPD +T ++ AC+ L +
Sbjct: 75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH 134
Query: 262 LDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVIN--VMI 319
L G+ V A ++GF ++ V + I L++KC RL + +FE L + +++ ++
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 320 STYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFD 378
S Y + G ALE+F M + D++P L VL++ + ++ G H+ +K G +
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 379 SNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEEL 438
+ SL MYAK G + ++ +F K+ +L+ WN ++ G +NG A E +D+F E+
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 439 LEEGLPPDRITLAAVLLACNYGGFVDKG 466
+ + + PD I++ + + AC G +++
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQA 342
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 198/414 (47%), Gaps = 49/414 (11%)
Query: 1 MSSYLKKAHVNKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLY 60
M S ++ A V+ S ++ L+ C + +H +F+LGF+A ++ N + LY
Sbjct: 106 MYSNMQLARVSPDSFTF-PHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALY 164
Query: 61 SRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPD--VVSWNSM 118
++ C R L +A VF+ +P P+ +VSW ++
Sbjct: 165 AK------------------------CRR-------LGSARTVFEGLPLPERTIVSWTAI 193
Query: 119 ISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLST---VSSACHGKQIHGSMIRSGL 175
+S YA G ALE+FS+M+ V+P +L+ + G+ IH S+++ GL
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 176 SLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFY 235
+ +L SL MY K G + A +F M+ ++I WN++ISG +GY A+D F+
Sbjct: 254 EIEPDLL-ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 236 SMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCN 295
M PD +I+ I+AC ++ +L++ + ++ + + + + SA ID+F+KC
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372
Query: 296 RLEDSVRLFEQ-LDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFT----- 349
+E + +F++ LDR D V + MI YG +G A+ L++ M R + P + T
Sbjct: 373 SVEGARLVFDRTLDR-DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 350 LSCVLSSIPIPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEI 403
++C S + V G F + + + ++++ + G +D + E+
Sbjct: 432 MACNHSGM----VREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEV 481
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 4/216 (1%)
Query: 93 KSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSI 152
K + TA +FD++ P+++ WN+MISGYA GY+ A++MF +M + VRP + +
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 153 LLST---VSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEEL 209
+S V S + ++ + RS +V + ++LIDM+ K G + A VF +
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYR-DDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 210 DIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVF 269
D++ W+++I G G A+ + +M G P++ T ++ AC + +G F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 270 ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFE 305
+ IDL + L+ + + +
Sbjct: 448 NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 302 bits (774), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 310/625 (49%), Gaps = 40/625 (6%)
Query: 12 KASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQ 71
KA S +L+ C + + F + IHG++ +LG ++ + N + +YSR G + +
Sbjct: 86 KAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRK 145
Query: 72 LFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIP----EPDVVSWNSMISGYASCGY 127
+F+ + +N SWN L K +D A+ + DE+ +PD+V+WNS++SGYAS G
Sbjct: 146 VFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGL 205
Query: 128 SDYALEMFSKMQLQGVRPSGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGN 184
S A+ + +MQ+ G++PS + S LL V+ H GK IHG ++R+ L +V +
Sbjct: 206 SKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQL-WYDVYVET 264
Query: 185 SLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSP 244
+LIDMY K G L YA VF M+ +I++WNSL+SG + + A M G P
Sbjct: 265 TLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP 324
Query: 245 DEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLF 304
D T + + + L +K V + G N + +A +FS C++
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA---IFSGCSK-------- 373
Query: 305 EQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPPVEH 364
G AL++F M E + P T+S +L + + H
Sbjct: 374 --------------------NGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLH 413
Query: 365 -GSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLT 423
G + H ++ +A VA++L++MY K+G + S+ EIF + + L SWN ++MG
Sbjct: 414 SGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYA 473
Query: 424 QNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGE 483
GR E + F +LE G+ PD IT +VL C G V +G F M+ YG++P
Sbjct: 474 MFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTI 533
Query: 484 EHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMD 543
EH +C++DLL ++G L +A D TM +P +IW + L + I+ D++L E +R+
Sbjct: 534 EHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQV 593
Query: 544 LQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGEL 603
L+ + Y ++ Y+ RWE + R++ +MR N + SWI I ++ F A
Sbjct: 594 LEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGK 653
Query: 604 QHHGGQKIYLVLRLLTWEMEDEGCV 628
H IY L L EM+ G V
Sbjct: 654 THPDEGDIYFELYKLVSEMKKSGYV 678
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 181/381 (47%), Gaps = 41/381 (10%)
Query: 163 GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCF 222
G IHG +I+ GL S+ + ++ + YG+ L +A +F M + D ++WN ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 223 NSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSI 282
SG E A++ F M++SG + T+ ++ C+ +G+Q+ +++G SN
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 283 VLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLM---- 338
+ ++ I ++S+ +LE S ++F + + + N ++S+Y + G+ + A+ L M
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 339 LREDI-------------------------------RPTEFTLSCVLSSIPIP-PVEHGS 366
L+ DI +P+ ++S +L ++ P ++ G
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 367 QFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNG 426
H +++ + V ++L++MY KTG + + +F +D +++V+WN+++ GL+
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 427 RAAETLDVFEELLEEGLPPDRITLAAVLLACNYG--GFVDKGMLVFSAMKEEYGVMPGEE 484
+ + + +EG+ PD IT + LA Y G +K + V MKE+ GV P
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNS--LASGYATLGKPEKALDVIGKMKEK-GVAPNVV 362
Query: 485 HYACIIDLLCQAGQLGKAIDI 505
+ I + G A+ +
Sbjct: 363 SWTAIFSGCSKNGNFRNALKV 383
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Query: 365 GSQFHSMAIKSGFD-SNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLT 423
G H IK G D S+ V S+ M Y + S+ + ++F ++ KRD ++WN I+M
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 424 QNGRAAETLDVFEELLEEGLPPDRITLAAVLLAC-NYGGFVDKGMLVFSAMKEEYGVMPG 482
++G + +++F E+ G T+ +L C N GF + + ++ G+
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR--LGLESN 123
Query: 483 EEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMM 542
+I + + G+L + + ++M S W SIL + G V + + M
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 543 DLQL-PSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVT 584
L P + ++ L YA +G + + V K M+ G+ T
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPST 225
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 125/341 (36%), Gaps = 79/341 (23%)
Query: 11 NKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVL 70
N A++S +++ CLS K +HG + Y+ +D+Y + G +
Sbjct: 395 NAATMSTLLKILG-CLSL--LHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAI 451
Query: 71 QLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDY 130
++F I K+ S WN M+ GYA G +
Sbjct: 452 EIFWGIKNKSLAS-------------------------------WNCMLMGYAMFGRGEE 480
Query: 131 ALEMFSKMQLQGVRPSGFTFSILLSTVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMY 190
+ FS M G+ P TF+ +LS ++ +++ G +
Sbjct: 481 GIAAFSVMLEAGMEPDAITFTSVLSVCKNS--------GLVQEG---------------W 517
Query: 191 GKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTIS 250
++ +G+ +E + ++ SGY + A D +M PD
Sbjct: 518 KYFDLMRSRYGIIPTIEHC-----SCMVDLLGRSGYLDEAWDFIQTM---SLKPDATIWG 569
Query: 251 IVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQL--- 307
+++C R+L+ + + ++V NS I+L+S NR ED R+ +
Sbjct: 570 AFLSSCKIHRDLELAEIAWK-RLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNN 628
Query: 308 -----DRWDYAVINVMISTYGRYGF-----GEVALELFQLM 338
D W + I+ + + G G++ EL++L+
Sbjct: 629 RVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLV 669
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 301 bits (771), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 298/539 (55%), Gaps = 6/539 (1%)
Query: 93 KSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSI 152
K D A K+F + D V+WN MISGY G + +L F +M GV P TFS
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 153 LLSTVS---SACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEEL 209
LL +VS + + KQIH ++R +SL ++ L ++LID Y K + A +F +
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISL-DIFLTSALIDAYFKCRGVSMAQNIFSQCNSV 404
Query: 210 DIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVF 269
D++ + ++ISG ++G +L+ F + SP+E T+ ++ L L G+++
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 270 ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGE 329
+K GF + + A ID+++KC R+ + +FE+L + D N MI+ +
Sbjct: 465 GFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPS 524
Query: 330 VALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLM 388
A+++F+ M I ++S LS+ +P G H IK S+ S+L+
Sbjct: 525 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 389 EMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEE-GLPPDR 447
+MYAK G++ ++ +F + ++++VSWN+I+ +G+ ++L +F E++E+ G+ PD+
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Query: 448 ITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITS 507
IT ++ +C + G VD+G+ F +M E+YG+ P +EHYAC++DL +AG+L +A +
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVK 704
Query: 508 TMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEA 567
+MPF P +W ++L A ++ +V+L E + ++MDL + Y L++ A+A WE+
Sbjct: 705 SMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWES 764
Query: 568 IVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDEG 626
+ +V+ +M++ + K+ G SWI I R + F +G++ H IY +L L E+ EG
Sbjct: 765 VTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEG 823
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 235/455 (51%), Gaps = 19/455 (4%)
Query: 88 LRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSG 147
++ L+ +D K+FD + + D V WN M++GYA CG D ++ FS M++ + P+
Sbjct: 180 IKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNA 239
Query: 148 FTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFL 204
TF +LS +S G Q+HG ++ SG+ + NSL+ MY K G A +F
Sbjct: 240 VTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI-KNSLLSMYSKCGRFDDASKLFR 298
Query: 205 NMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDK 264
M D ++WN +ISG SG E +L FY M SG PD T S ++ + +K NL+
Sbjct: 299 MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEY 358
Query: 265 GKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGR 324
KQ+ ++ + + SA ID + KC + + +F Q + D V MIS Y
Sbjct: 359 CKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLH 418
Query: 325 YGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPI-PPVEHGSQFHSMAIKSGFDSNAVV 383
G +LE+F+ +++ I P E TL +L I I ++ G + H IK GFD+ +
Sbjct: 419 NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI 478
Query: 384 ASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGL 443
++++MYAK G ++ + EIF +L KRD+VSWN+++ Q+ + +D+F ++ G+
Sbjct: 479 GCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGI 538
Query: 444 PPDRITLAAVLLAC------NYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAG 497
D ++++A L AC ++G + M+ S + Y + +ID+ + G
Sbjct: 539 CYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS-------ESTLIDMYAKCG 591
Query: 498 QLGKAIDITSTMPFQPGCSIWESILRASAIYGDVK 532
L A+++ TM + S W SI+ A +G +K
Sbjct: 592 NLKAAMNVFKTMKEKNIVS-WNSIIAACGNHGKLK 625
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 189/439 (43%), Gaps = 32/439 (7%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S L+ C + K +H L + +Y R L +Y+ G+ D ++F +
Sbjct: 39 SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRL-- 96
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
++ + WNS+IS + G + AL + KM
Sbjct: 97 ---------------------------DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKM 129
Query: 139 QLQGVRPSGFTFSILLSTVSSACHGKQIHG-SMIRSGLSLS-NVVLGNSLIDMYGKLGVL 196
GV P TF L+ + + K I S S L + N + +SLI Y + G +
Sbjct: 130 LCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKI 189
Query: 197 YYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINAC 256
+F + + D + WN +++G G + + F MR SP+ T V++ C
Sbjct: 190 DVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVC 249
Query: 257 TKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVIN 316
+D G Q+ L V G + ++ + ++SKC R +D+ +LF + R D N
Sbjct: 250 ASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWN 309
Query: 317 VMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSI-PIPPVEHGSQFHSMAIKS 375
MIS Y + G E +L F M+ + P T S +L S+ +E+ Q H ++
Sbjct: 310 CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRH 369
Query: 376 GFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVF 435
+ + S+L++ Y K + + IF + + D+V + ++ G NG ++L++F
Sbjct: 370 SISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMF 429
Query: 436 EELLEEGLPPDRITLAAVL 454
L++ + P+ ITL ++L
Sbjct: 430 RWLVKVKISPNEITLVSIL 448
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 37/276 (13%)
Query: 30 SFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLR 89
+ + +HG + K GF+ +G +D+Y++ G + ++F+ + +++ +SWN
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWN---- 511
Query: 90 GLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFT 149
SMI+ A A+++F +M + G+ +
Sbjct: 512 ---------------------------SMITRCAQSDNPSAAIDIFRQMGVSGICYDCVS 544
Query: 150 FSILLSTVS---SACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNM 206
S LS + S GK IHG MI+ L+ S+V ++LIDMY K G L A VF M
Sbjct: 545 ISAALSACANLPSESFGKAIHGFMIKHSLA-SDVYSESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 207 EELDIISWNSLISGCFNSGYGELALDQFYSM-RYSGYSPDEYTISIVINACTKLRNLDKG 265
+E +I+SWNS+I+ C N G + +L F+ M SG PD+ T +I++C + ++D+G
Sbjct: 604 KEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEG 663
Query: 266 KQVF-ALSVKVGFLSNSIVLSATIDLFSKCNRLEDS 300
+ F +++ G + +DLF + RL ++
Sbjct: 664 VRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 3/222 (1%)
Query: 249 ISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLD 308
+S+++ AC+ L +GKQV A + +S + +++ C D ++F +LD
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 309 --RWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPPVEHGS 366
R N +IS++ R G AL + ML + P T C++ + G
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 367 QFHSMAIKS-GFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQN 425
F S + S G D N VASSL++ Y + G ID +++F ++ ++D V WN ++ G +
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 426 GRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGM 467
G + F + + + P+ +T VL C +D G+
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 52/267 (19%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S + C + S F K IHG + K + Y + +D+Y++ G + +F + +
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPE-----PDVVSWNSMISGYASCGYSDYALE 133
KN +SWN + L +L +F E+ E PD +++ +IS G D +
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 134 MFSKM-QLQGVRPSGFTFSILLSTVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGK 192
F M + G++P +Q H + + +D++G+
Sbjct: 666 FFRSMTEDYGIQP------------------QQEHYACV---------------VDLFGR 692
Query: 193 LGVLYYAFGVFLNME-ELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISI 251
G L A+ +M D W +L+ C ELA + S + P +
Sbjct: 693 AGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELA--EVASSKLMDLDPSNSGYYV 750
Query: 252 VIN----------ACTKLRNLDKGKQV 268
+I+ + TK+R+L K ++V
Sbjct: 751 LISNAHANAREWESVTKVRSLMKEREV 777
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 299 bits (765), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 168/549 (30%), Positives = 306/549 (55%), Gaps = 10/549 (1%)
Query: 92 LKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQG-VRPSGFTF 150
+K + AL++FDE+ +PD+V+W+SM+SG+ G A+E F +M + V P T
Sbjct: 107 IKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTL 166
Query: 151 SILLST---VSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNME 207
L+S +S++ G+ +HG +IR G S +++ L NSL++ Y K A +F +
Sbjct: 167 ITLVSACTKLSNSRLGRCVHGFVIRRGFS-NDLSLVNSLLNCYAKSRAFKEAVNLFKMIA 225
Query: 208 ELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQ 267
E D+ISW+++I+ +G AL F M G P+ T+ V+ AC +L++G++
Sbjct: 226 EKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRK 285
Query: 268 VFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGF 327
L+++ G + V +A +D++ KC E++ +F ++ R D +IS + G
Sbjct: 286 THELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGM 345
Query: 328 GEVALELFQLMLRED-IRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVAS 385
++E F +ML E+ RP + VL S + +E FHS IK GFDSN + +
Sbjct: 346 AHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGA 405
Query: 386 SLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEG-LP 444
SL+E+Y++ GS+ +++++F + +D V W +++ G +G+ + L+ F +++ +
Sbjct: 406 SLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVK 465
Query: 445 PDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAID 504
P+ +T ++L AC++ G + +G+ +F M +Y + P EHYA ++DLL + G L AI+
Sbjct: 466 PNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIE 525
Query: 505 ITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGR 564
IT MPF P I ++L A I+ + ++ E VA+++ +L+ Y L++ Y ++G
Sbjct: 526 ITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGE 585
Query: 565 WEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMED 624
WE + +++ +++ GI K S I I+ +++ F A + H + +Y +L+ L M++
Sbjct: 586 WENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKE 645
Query: 625 --EGCVYLE 631
E CVY E
Sbjct: 646 DLENCVYFE 654
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 226/436 (51%), Gaps = 8/436 (1%)
Query: 100 ALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLST--- 156
A ++F E+ + + WN+++ + + L FS M +P FT + L
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 157 VSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNS 216
+ +G+ IHG + + S++ +G+SLI MY K G + A +F +E+ DI++W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 217 LISGCFNSGYGELALDQFYSM-RYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKV 275
++SG +G A++ F M S +PD T+ +++ACTKL N G+ V ++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 276 GFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELF 335
GF ++ ++++ ++ ++K +++V LF+ + D + +I+ Y + G AL +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 336 QLMLREDIRPTEFTLSCVLSSIPIP-PVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKT 394
M+ + P T+ CVL + +E G + H +AI+ G ++ V+++L++MY K
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 395 GSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFE-ELLEEGLPPDRITLAAV 453
S + + +F ++ ++D+VSW ++ G T NG A +++ F LLE PD I + V
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 454 LLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQP 513
L +C+ GF+++ F + +YG A +++L + G LG A + + + +
Sbjct: 373 LGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKD 431
Query: 514 GCSIWESILRASAIYG 529
+W S++ I+G
Sbjct: 432 TV-VWTSLITGYGIHG 446
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 192/422 (45%), Gaps = 42/422 (9%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKN 80
L+ C + + +HG + + GF+ L N L+ Y++ + + LF I +K+
Sbjct: 169 LVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKD 228
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
ISW +++I+ Y G + AL +F+ M
Sbjct: 229 VISW-------------------------------STVIACYVQNGAAAEALLVFNDMMD 257
Query: 141 QGVRPSGFTFSILLSTVSSAC---HGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLY 197
G P+ T +L ++A G++ H IR GL + V + +L+DMY K
Sbjct: 258 DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE-TEVKVSTALVDMYMKCFSPE 316
Query: 198 YAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYS-PDEYTISIVINAC 256
A+ VF + D++SW +LISG +G ++++F M + PD + V+ +C
Sbjct: 317 EAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSC 376
Query: 257 TKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVIN 316
++L L++ K + +K GF SN + ++ ++L+S+C L ++ ++F + D V
Sbjct: 377 SELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWT 436
Query: 317 VMISTYGRYGFGEVALELFQLMLR-EDIRPTEFTLSCVLSSIPIPPVEHGSQ--FHSMAI 373
+I+ YG +G G ALE F M++ +++P E T +LS+ + H F M
Sbjct: 437 SLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVN 496
Query: 374 KSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMG---LTQNGRAAE 430
N + L+++ + G +D++ EI ++ ++G + QNG AE
Sbjct: 497 DYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAE 556
Query: 431 TL 432
T+
Sbjct: 557 TV 558
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 41/194 (21%)
Query: 20 QLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQK 79
+++ C + AK H ++ K GF+++ ++G ++LYSR G+ + ++F+ I K
Sbjct: 371 KVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK 430
Query: 80 NCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM- 138
D V W S+I+GY G ALE F+ M
Sbjct: 431 -------------------------------DTVVWTSLITGYGIHGKGTKALETFNHMV 459
Query: 139 QLQGVRPSGFTFSILLSTVSSACHGKQIHGSMIRSGLSLSNVVLGNS------LIDMYGK 192
+ V+P+ TF LS +S+ H IH + L +++ L + L+D+ G+
Sbjct: 460 KSSEVKPNEVTF---LSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGR 516
Query: 193 LGVLYYAFGVFLNM 206
+G L A + M
Sbjct: 517 VGDLDTAIEITKRM 530
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 394 TGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAV 453
+ S+D+ ++F ++ KR L WNT++ L++ + E L F + + PD TL
Sbjct: 8 SSSVDAR-QMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVA 66
Query: 454 LLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHY--ACIIDLLCQAGQLGKAIDITSTMPF 511
L AC V+ G ++ +K++ V G + Y + +I + + G++ +A+ + +
Sbjct: 67 LKACGELREVNYGEMIHGFVKKD--VTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE- 123
Query: 512 QPGCSIWESIL 522
+P W S++
Sbjct: 124 KPDIVTWSSMV 134
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 298 bits (764), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 162/516 (31%), Positives = 292/516 (56%), Gaps = 13/516 (2%)
Query: 100 ALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLST--- 156
A KVFD +PE +VVSW++++SG+ G +L +FS+M QG+ P+ FTFS L
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 157 VSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNS 216
+++ G QIHG ++ G + V +GNSL+DMY K G + A VF + + +ISWN+
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMM-VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNA 178
Query: 217 LISGCFNSGYGELALDQFYSMRYSGYS--PDEYTISIVINACTKLRNLDKGKQVFALSVK 274
+I+G ++GYG ALD F M+ + PDE+T++ ++ AC+ + GKQ+ V+
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 238
Query: 275 VGFL--SNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVAL 332
GF S++ + + +DL+ KC L + + F+Q+ + +I Y + G A+
Sbjct: 239 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 333 ELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIK--SGFDSNAVVASSLME 389
LF+ + + + F LS ++ + G Q ++A+K SG +++ V +S+++
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS--VLNSVVD 356
Query: 390 MYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRIT 449
MY K G +D + + F ++ +D++SW ++ G ++G +++ +F E+L + PD +
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVC 416
Query: 450 LAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTM 509
AVL AC++ G + +G +FS + E +G+ P EHYAC++DLL +AG+L +A + TM
Sbjct: 417 YLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM 476
Query: 510 PFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIV 569
P +P IW+++L ++GD++L + V + ++ + +P Y +++ Y G W
Sbjct: 477 PIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQG 536
Query: 570 RVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQH 605
+++ G+ K G SW+ I+ ++ F +GE H
Sbjct: 537 NARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSH 572
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 172/312 (55%), Gaps = 11/312 (3%)
Query: 162 HGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGC 221
G Q+H +++SG L N++ N LIDMY K A+ VF +M E +++SW++L+SG
Sbjct: 24 QGGQVHCYLLKSGSGL-NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGH 82
Query: 222 FNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNS 281
+G + +L F M G P+E+T S + AC L L+KG Q+ +K+GF
Sbjct: 83 VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMV 142
Query: 282 IVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLRE 341
V ++ +D++SKC R+ ++ ++F ++ N MI+ + G+G AL+ F +M
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 342 DI--RPTEFTLSCVLSSI-PIPPVEHGSQFHSMAIKSGFD--SNAVVASSLMEMYAKTGS 396
+I RP EFTL+ +L + + G Q H ++SGF S+A + SL+++Y K G
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 397 IDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLA 456
+ S+ + F ++ ++ ++SW+++++G Q G E + +F+ L E D L++++
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSII-- 320
Query: 457 CNYGGFVDKGML 468
G F D +L
Sbjct: 321 ---GVFADFALL 329
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 191/404 (47%), Gaps = 40/404 (9%)
Query: 25 CLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISW 84
C + + IHG K+GF +GN +D+YS+ G ++ ++F I ++ ISW
Sbjct: 117 CGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISW 176
Query: 85 NICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGV- 143
N +MI+G+ GY AL+ F MQ +
Sbjct: 177 N-------------------------------AMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 144 -RPSGFTFSILLSTVSSAC---HGKQIHGSMIRSGLSL-SNVVLGNSLIDMYGKLGVLYY 198
RP FT + LL SS GKQIHG ++RSG S+ + SL+D+Y K G L+
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 199 AFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTK 258
A F ++E +ISW+SLI G G A+ F ++ D + +S +I
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 259 LRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVM 318
L +GKQ+ AL+VK+ + VL++ +D++ KC ++++ + F ++ D V+
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVV 385
Query: 319 ISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPP-VEHGSQFHSMAIKS-G 376
I+ YG++G G+ ++ +F MLR +I P E VLS+ ++ G + S +++ G
Sbjct: 386 ITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHG 445
Query: 377 FDSNAVVASSLMEMYAKTGSIDSSTEIFVKLD-KRDLVSWNTIM 419
+ ++++ + G + + + + K ++ W T++
Sbjct: 446 IKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 252 VINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWD 311
++ CT+ D+G QV +K G N I + ID++ KC + ++F+ + +
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 312 YAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHS 370
+ ++S + G + +L LF M R+ I P EFT S L + + +E G Q H
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 371 MAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAE 430
+K GF+ V +SL++MY+K G I+ + ++F ++ R L+SWN ++ G G ++
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 431 TLDVFEELLEEGLP--PDRITLAAVLLACNYGGFVDKG 466
LD F + E + PD TL ++L AC+ G + G
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 149/340 (43%), Gaps = 40/340 (11%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFN--AHTYLGNRCLDLYSRFGTSDDVLQLFDEI 76
+ L+ C S K IHG L + GF+ + + +DLY + G + FD+I
Sbjct: 214 TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI 273
Query: 77 PQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFS 136
+K ISW +S+I GYA G A+ +F
Sbjct: 274 KEKTMISW-------------------------------SSLILGYAQEGEFVEAMGLFK 302
Query: 137 KMQLQGVRPSGFTFSILLSTVSSAC---HGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKL 193
++Q + F S ++ + GKQ+ ++ L VL NS++DMY K
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL-NSVVDMYLKC 361
Query: 194 GVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVI 253
G++ A F M+ D+ISW +I+G G G+ ++ FY M PDE V+
Sbjct: 362 GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL 421
Query: 254 NACTKLRNLDKGKQVFALSVKV-GFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLD-RWD 311
+AC+ + +G+++F+ ++ G + +DL + RL+++ L + + + +
Sbjct: 422 SACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPN 481
Query: 312 YAVINVMISTYGRYGFGEVALELFQLMLREDIR-PTEFTL 350
+ ++S +G E+ E+ +++LR D + P + +
Sbjct: 482 VGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVM 521
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%)
Query: 363 EHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGL 422
+ G Q H +KSG N + ++ L++MY K + ++F + +R++VSW+ +M G
Sbjct: 23 DQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGH 82
Query: 423 TQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLV 469
NG +L +F E+ +G+ P+ T + L AC ++KG+ +
Sbjct: 83 VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 297 bits (761), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/621 (29%), Positives = 306/621 (49%), Gaps = 59/621 (9%)
Query: 14 SLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLF 73
+L +C + RC D + +HG + G + +L N +D+YS+ G
Sbjct: 154 ALGFCGE---RC----DLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCG--------- 197
Query: 74 DEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALE 133
LD A+ +FD E D VSWNS+ISGY G ++ L
Sbjct: 198 ----------------------KLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLN 235
Query: 134 MFSKMQLQGVRPSGFTFSILLSTVSSAC----------HGKQIHGSMIRSGLSLSNVVLG 183
+ +KM G+ + + L +V AC G IH + G+ ++V+
Sbjct: 236 LLAKMHRDGLNLTTYA----LGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF-DIVVR 290
Query: 184 NSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFN-----SGYGELALDQFYSMR 238
+L+DMY K G L A +F M +++++N++ISG A F M+
Sbjct: 291 TALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ 350
Query: 239 YSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLE 298
G P T S+V+ AC+ + L+ G+Q+ AL K F S+ + SA I+L++ E
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTE 410
Query: 299 DSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP 358
D ++ F + D A MI + + E A +LF+ + IRP E+T+S ++S+
Sbjct: 411 DGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACA 470
Query: 359 -IPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNT 417
+ G Q AIKSG D+ V +S + MYAK+G++ + ++F+++ D+ +++
Sbjct: 471 DFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSA 530
Query: 418 IMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEY 477
++ L Q+G A E L++FE + G+ P++ VL+AC +GG V +G+ F MK +Y
Sbjct: 531 MISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDY 590
Query: 478 GVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENV 537
+ P E+H+ C++DLL + G+L A ++ + FQ W ++L + +Y D + + V
Sbjct: 591 RINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRV 650
Query: 538 AERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYT 597
AER+M+L+ + Y LL Y G + V+++MR G+ K SWI I N+ ++
Sbjct: 651 AERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHS 710
Query: 598 FNAGELQHHGGQKIYLVLRLL 618
F +L H Q IY +L +
Sbjct: 711 FAVADLSHPSSQMIYTMLETM 731
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 140/527 (26%), Positives = 240/527 (45%), Gaps = 58/527 (11%)
Query: 33 FAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLL 92
K HGH+ K N YL N L++Y + QLFD +P++N IS
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIIS--------- 115
Query: 93 KSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSI 152
+NS+ISGY G+ + A+E+F + + ++ FT++
Sbjct: 116 ----------------------FNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAG 153
Query: 153 LLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEEL 209
L C G+ +HG ++ +GLS V L N LIDMY K G L A +F +E
Sbjct: 154 ALGFCGERCDLDLGELLHGLVVVNGLS-QQVFLINVLIDMYSKCGKLDQAMSLFDRCDER 212
Query: 210 DIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRN---LDKGK 266
D +SWNSLISG G E L+ M G + Y + V+ AC N ++KG
Sbjct: 213 DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGM 272
Query: 267 QVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYG 326
+ + K+G + +V +A +D+++K L+++++LF + + N MIS G
Sbjct: 273 AIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMIS--GFLQ 330
Query: 327 FGEV-------ALELFQLMLREDIRPTEFTLSCVLSSIPIPP-VEHGSQFHSMAIKSGFD 378
E+ A +LF M R + P+ T S VL + +E+G Q H++ K+ F
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 379 SNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEEL 438
S+ + S+L+E+YA GS + + F K+D+ SW +++ QN + D+F +L
Sbjct: 391 SDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Query: 439 LEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACI----IDLLC 494
+ P+ T++ ++ AC D L + Y + G + + + I +
Sbjct: 451 FSSHIRPEEYTVSLMMSAC-----ADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYA 505
Query: 495 QAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERM 541
++G + A + + P + + +++ + A +G N+ E M
Sbjct: 506 KSGNMPLANQVFIEVQ-NPDVATYSAMISSLAQHGSANEALNIFESM 551
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 171/329 (51%), Gaps = 13/329 (3%)
Query: 150 FSILLSTVS---SACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNM 206
+ IL T + S GK HG MI+S L+ +L N+L++MY K L +A +F M
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLL-NNLLNMYCKCRELGFARQLFDRM 108
Query: 207 EELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGK 266
E +IIS+NSLISG G+ E A++ F R + D++T + + C + +LD G+
Sbjct: 109 PERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGE 168
Query: 267 QVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYG 326
+ L V G +++ ID++SKC +L+ ++ LF++ D D N +IS Y R G
Sbjct: 169 LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVG 228
Query: 327 FGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPP----VEHGSQFHSMAIKSGFDSNAV 382
E L L M R+ + T + L VL + I +E G H K G + + V
Sbjct: 229 AAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIV 288
Query: 383 VASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQ-----NGRAAETLDVFEE 437
V ++L++MYAK GS+ + ++F + +++V++N ++ G Q + ++E +F +
Sbjct: 289 VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMD 348
Query: 438 LLEEGLPPDRITLAAVLLACNYGGFVDKG 466
+ GL P T + VL AC+ ++ G
Sbjct: 349 MQRRGLEPSPSTFSVVLKACSAAKTLEYG 377
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 148/307 (48%), Gaps = 28/307 (9%)
Query: 290 LFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFT 349
++ KC L + +LF+++ + N +IS Y + GF E A+ELF +++ +FT
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 350 LSCVLSSI-PIPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLD 408
+ L ++ G H + + +G + + L++MY+K G +D + +F + D
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 409 KRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYG---GFVDK 465
+RD VSWN+++ G + G A E L++ ++ +GL L +VL AC GF++K
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 466 GMLVF---SAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESIL 522
GM + + + E+ ++ ++D+ + G L +AI + S MP + +
Sbjct: 271 GMAIHCYTAKLGMEFDIVV----RTALLDMYAKNGSLKEAIKLFSLMPSK------NVVT 320
Query: 523 RASAIYGDVKLTENVAER-------MMDLQL----PSPLPYSLLTQAYAMRGRWEAIVRV 571
+ I G +++ E E MD+Q PSP +S++ +A + E ++
Sbjct: 321 YNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Query: 572 KKVMRKN 578
++ KN
Sbjct: 381 HALICKN 387
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 296 bits (758), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/613 (29%), Positives = 302/613 (49%), Gaps = 36/613 (5%)
Query: 9 HVNKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDD 68
H S S ++ C + + +++H + K + Y+G+ LD+Y R G
Sbjct: 102 HAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVG---- 157
Query: 69 VLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYS 128
+D + +VF E+P + V+W ++I+G G
Sbjct: 158 ---------------------------KIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 190
Query: 129 DYALEMFSKMQLQGVRPSGFTFSILLSTVS---SACHGKQIHGSMIRSGLSLSNVVLGNS 185
L FS+M +TF+I L + +GK IH +I G ++ + + NS
Sbjct: 191 KEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF-VTTLCVANS 249
Query: 186 LIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPD 245
L MY + G + +F NM E D++SW SLI G A++ F MR S P+
Sbjct: 250 LATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPN 309
Query: 246 EYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFE 305
E T + + +AC L L G+Q+ + +G + V ++ + ++S C L + LF+
Sbjct: 310 EQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQ 369
Query: 306 QLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLS-SIPIPPVEH 364
+ D + +I Y + GFGE + F M + +PT+F L+ +LS S + +E
Sbjct: 370 GMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEG 429
Query: 365 GSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQ 424
G Q H++A+ G + N+ V SSL+ MY+K GSI ++ IF + D+ D+VS ++ G +
Sbjct: 430 GRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAE 489
Query: 425 NGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEE 484
+G++ E +D+FE+ L+ G PD +T +VL AC + G +D G F+ M+E Y + P +E
Sbjct: 490 HGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKE 549
Query: 485 HYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDL 544
HY C++DLLC+AG+L A + + M ++ +W ++L A GD++ AER+++L
Sbjct: 550 HYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILEL 609
Query: 545 QLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQ 604
L Y+ G E V+K M+ G+ K G S I IK+ + F +G+
Sbjct: 610 DPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRF 669
Query: 605 HHGGQKIYLVLRL 617
H + IY +L L
Sbjct: 670 HPQSEDIYNILEL 682
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 216/424 (50%), Gaps = 8/424 (1%)
Query: 85 NICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL--QG 142
N LR L+ + NL A +VFD++P D+VSW S+I Y + SD AL +FS M++
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 143 VRPSGFTFSILLSTV---SSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYA 199
V P S++L S+ +G+ +H +++ L LS+V +G+SL+DMY ++G + +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSL-LSSVYVGSSLLDMYKRVGKIDKS 162
Query: 200 FGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKL 259
VF M + ++W ++I+G ++G + L F M S D YT +I + AC L
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 260 RNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMI 319
R + GK + + GF++ V ++ ++++C ++D + LFE + D +I
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 320 STYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFD 378
Y R G A+E F M + P E T + + S+ + + G Q H + G +
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 379 SNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEEL 438
+ V++S+M+MY+ G++ S++ +F + RD++SW+TI+ G Q G E F +
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 439 LEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQ 498
+ G P LA++L ++ G V A+ +G+ + +I++ + G
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQVH-ALALCFGLEQNSTVRSSLINMYSKCGS 461
Query: 499 LGKA 502
+ +A
Sbjct: 462 IKEA 465
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 296 bits (757), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/616 (29%), Positives = 317/616 (51%), Gaps = 21/616 (3%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNR----CLDLYSRFGTSDDVLQLFD 74
S+ I + F++F + IHG ++ F+ NR C L SR D+ ++F+
Sbjct: 3 SRAIFQRFRFRAFSISHVIHGKCYR-SFSVTVEFQNREVLICNHLLSR--RIDEAREVFN 59
Query: 75 EIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEM 134
++P + + + G +S+ L AL +FDE+P DVVSWNSMISG CG + A+++
Sbjct: 60 QVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKL 119
Query: 135 FSKMQLQGVRPSGFTFSILLSTVSSAC--HGKQIHGSMIRSGLSLSNVVLGNSLIDMYGK 192
F +M + V + + + + C GK + + + + NS++ Y +
Sbjct: 120 FDEMPERSV--------VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQ 171
Query: 193 LGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIV 252
G + A +F M ++ISW ++I G + ALD F +M + V
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 253 INACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDY 312
I AC G QV L +K+GFL V ++ I ++ C R+ DS ++F++
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 313 AVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSI-PIPPVEHGSQFHSM 371
AV ++S Y E AL +F MLR I P + T + L+S + ++ G + H +
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 372 AIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAET 431
A+K G +++A V +SL+ MY+ +G+++ + +F+K+ K+ +VSWN+I++G Q+GR
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 432 LDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGE-EHYACII 490
+F +++ PD IT +L AC++ GF++KG +F M + + +HY C++
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMV 471
Query: 491 DLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPL 550
D+L + G+L +A ++ M +P +W ++L A ++ DV E A + +L S
Sbjct: 472 DILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSA 531
Query: 551 PYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQK 610
Y LL+ YA GRW + +++ M+KNGI K G SW+ I+ + + F +G+ H +
Sbjct: 532 AYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH--CSR 589
Query: 611 IYLVLRLLTWEMEDEG 626
IY L L ++++ G
Sbjct: 590 IYEKLEFLREKLKELG 605
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 259/450 (57%), Gaps = 3/450 (0%)
Query: 163 GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCF 222
G+ +H +++S + ++V+GN+L++MY K G L A VF M + D ++W +LISG
Sbjct: 79 GRIVHAHILQS-IFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 223 NSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSI 282
AL F M GYSP+E+T+S VI A R G Q+ VK GF SN
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 283 VLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLRED 342
V SA +DL+++ ++D+ +F+ L+ + N +I+ + R E ALELFQ MLR+
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 343 IRPTEFTLSCVLSSIPIPP-VEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSST 401
RP+ F+ + + + +E G H+ IKSG A ++L++MYAK+GSI +
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 402 EIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGG 461
+IF +L KRD+VSWN+++ Q+G E + FEE+ G+ P+ I+ +VL AC++ G
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 462 FVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESI 521
+D+G + MK++ G++P HY ++DLL +AG L +A+ MP +P +IW+++
Sbjct: 378 LLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKAL 436
Query: 522 LRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGIN 581
L A ++ + +L AE + +L P P+ +L YA GRW RV+K M+++G+
Sbjct: 437 LNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVK 496
Query: 582 KVTGCSWIGIKNRIYTFNAGELQHHGGQKI 611
K CSW+ I+N I+ F A + +H ++I
Sbjct: 497 KEPACSWVEIENAIHMFVANDERHPQREEI 526
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 195/392 (49%), Gaps = 36/392 (9%)
Query: 13 ASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQL 72
A + + L+ +C FK + +H H+ + F +GN L++Y++ G+
Sbjct: 58 ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS------- 110
Query: 73 FDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYAL 132
L+ A KVF+++P+ D V+W ++ISGY+ AL
Sbjct: 111 ------------------------LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDAL 146
Query: 133 EMFSKMQLQGVRPSGFTFSILLSTVSS---ACHGKQIHGSMIRSGLSLSNVVLGNSLIDM 189
F++M G P+ FT S ++ ++ C G Q+HG ++ G SNV +G++L+D+
Sbjct: 147 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD-SNVHVGSALLDL 205
Query: 190 YGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTI 249
Y + G++ A VF +E + +SWN+LI+G E AL+ F M G+ P ++
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSY 265
Query: 250 SIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDR 309
+ + AC+ L++GK V A +K G + + +D+++K + D+ ++F++L +
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK 325
Query: 310 WDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPP-VEHGSQF 368
D N +++ Y ++GFG+ A+ F+ M R IRP E + VL++ ++ G +
Sbjct: 326 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 385
Query: 369 HSMAIKSGFDSNAVVASSLMEMYAKTGSIDSS 400
+ + K G A +++++ + G ++ +
Sbjct: 386 YELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 176/349 (50%), Gaps = 19/349 (5%)
Query: 242 YSP-DEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDS 300
Y P D + ++ CT + L +G+ V A ++ F + ++ + +++++KC LE++
Sbjct: 55 YIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEA 114
Query: 301 VRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIP 360
++FE++ + D+ +IS Y ++ AL F MLR P EFTLS V+ +
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA---A 171
Query: 361 PVEH----GSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWN 416
E G Q H +K GFDSN V S+L+++Y + G +D + +F L+ R+ VSWN
Sbjct: 172 AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWN 231
Query: 417 TIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEE 476
++ G + + L++F+ +L +G P + A++ AC+ GF+++G V +
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHA----- 286
Query: 477 YGVMPGEEHYA----CIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVK 532
Y + GE+ A ++D+ ++G + A I + + S W S+L A A +G K
Sbjct: 287 YMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS-WNSLLTAYAQHGFGK 345
Query: 533 LTENVAERMMDLQL-PSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGI 580
E M + + P+ + + + A + G + ++M+K+GI
Sbjct: 346 EAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGI 394
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 293 bits (751), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 186/622 (29%), Positives = 317/622 (50%), Gaps = 45/622 (7%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
SQL+ +C+ +S KTI H+ K GF A
Sbjct: 69 SQLLRQCIDERSISGIKTIQAHMLKSGFPAE----------------------------- 99
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
IS + + LK ++D A +VFD + E +V+WNS+I+ S A+EM+ M
Sbjct: 100 ---ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLM 156
Query: 139 QLQGVRPSGFTFSILL---STVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGV 195
V P +T S + S +S ++ HG + GL +SNV +G++L+DMY K G
Sbjct: 157 ITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 196 LYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINA 255
A V +EE D++ +LI G G A+ F SM P+EYT + V+ +
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 256 CTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVI 315
C L+++ GK + L VK GF S ++ + ++ +C+ ++DS+R+F+ ++ +
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSW 336
Query: 316 NVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIK 374
+IS + G E+AL F+ M+R+ I+P FTLS L + E G Q H + K
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK 396
Query: 375 SGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDV 434
GFD + S L+++Y K G D + +F L + D++S NT++ QNG E LD+
Sbjct: 397 YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDL 456
Query: 435 FEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLC 494
FE ++ GL P+ +T+ +VLLACN V++G +F + +++ +M +HYAC++DLL
Sbjct: 457 FERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLG 515
Query: 495 QAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSL 554
+AG+L +A ++ +T P +W ++L A ++ V++ E + ++++++ L
Sbjct: 516 RAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLIL 574
Query: 555 LTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGEL-QHHGGQKIYL 613
++ YA G+W ++ +K M+ + K SW+ I +TF AG+L H ++I
Sbjct: 575 MSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILE 634
Query: 614 VLRLLTWE------MEDEGCVY 629
L L + +ED+ CV+
Sbjct: 635 NLEELIKKSKDLGYVEDKSCVF 656
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 146/333 (43%), Gaps = 38/333 (11%)
Query: 16 SYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDE 75
+Y S LI C + K K IHG + K GF + L +Y R DD L++F
Sbjct: 269 TYASVLIS-CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKC 327
Query: 76 IPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMF 135
I N +SW S+ISG G + AL F
Sbjct: 328 IEYPNQVSW-------------------------------TSLISGLVQNGREEMALIEF 356
Query: 136 SKMQLQGVRPSGFTFSILLSTVSSAC---HGKQIHGSMIRSGLSLSNVVLGNSLIDMYGK 192
KM ++P+ FT S L S+ G+QIHG + + G G+ LID+YGK
Sbjct: 357 RKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYA-GSGLIDLYGK 415
Query: 193 LGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIV 252
G A VF + E+D+IS N++I +G+G ALD F M G P++ T+ V
Sbjct: 416 CGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSV 475
Query: 253 INACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDY 312
+ AC R +++G ++F K + + + +DL + RLE++ L ++ D
Sbjct: 476 LLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDL 535
Query: 313 AVINVMISTYGRYGFGEVALELFQLMLREDIRP 345
+ ++S + E+A + + +L +I P
Sbjct: 536 VLWRTLLSACKVHRKVEMAERITRKIL--EIEP 566
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 289 bits (739), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 191/639 (29%), Positives = 313/639 (48%), Gaps = 66/639 (10%)
Query: 14 SLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLF 73
S S + ++ C + +H H K F A + LD+Y+
Sbjct: 280 SQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA------------ 327
Query: 74 DEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALE 133
K DN+ A +FD + S+N+MI+GY+ + AL
Sbjct: 328 -------------------KCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 134 MFSKMQLQGVRPSGFTFSILLSTVSSAC-------HGKQIHGSMIRSGLSLSNVVLGNSL 186
+F ++ G+ GF I LS V AC G QI+G I+S LSL +V + N+
Sbjct: 369 LFHRLMSSGL---GFD-EISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL-DVCVANAA 423
Query: 187 IDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDE 246
IDMYGK L AF VF M D +SWN++I+ +G G L F SM S PDE
Sbjct: 424 IDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE 483
Query: 247 YTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRL--- 303
+T ++ ACT +L G ++ + VK G SNS V + ID++SKC +E++ ++
Sbjct: 484 FTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
Query: 304 ----------FEQLDRWDYAVI-------NVMISTYGRYGFGEVALELFQLMLREDIRPT 346
E+L++ + N +IS Y E A LF M+ I P
Sbjct: 543 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 602
Query: 347 EFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFV 405
+FT + VL + + G Q H+ IK S+ + S+L++MY+K G + S +F
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFE 662
Query: 406 KLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDK 465
K +RD V+WN ++ G +G+ E + +FE ++ E + P+ +T ++L AC + G +DK
Sbjct: 663 KSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDK 722
Query: 466 GMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRAS 525
G+ F MK +YG+ P HY+ ++D+L ++G++ +A+++ MPF+ IW ++L
Sbjct: 723 GLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVC 782
Query: 526 AIY-GDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVT 584
I+ +V++ E ++ L Y+LL+ YA G WE + +++ MR + K
Sbjct: 783 TIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEP 842
Query: 585 GCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEME 623
GCSW+ +K+ ++ F G+ H ++IY L L+ EM+
Sbjct: 843 GCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 283/569 (49%), Gaps = 27/569 (4%)
Query: 9 HVNKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDD 68
VN S + S + C + + K H H+ GF T++ N L +Y+
Sbjct: 42 QVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVS 101
Query: 69 VLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYS 128
+FD++P ++ +SWN + G KS+++ A F+ +P DVVSWNSM+SGY G S
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 161
Query: 129 DYALEMFSKMQLQGVRPSGFTFSILLSTVS---SACHGKQIHGSMIRSGLSLSNVVLGNS 185
++E+F M +G+ G TF+I+L S G QIHG ++R G ++VV ++
Sbjct: 162 LKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCD-TDVVAASA 220
Query: 186 LIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPD 245
L+DMY K + VF + E + +SW+++I+GC + LAL F M+
Sbjct: 221 LLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVS 280
Query: 246 EYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFE 305
+ + V+ +C L L G Q+ A ++K F ++ IV +AT+D+++KC+ ++D+ LF+
Sbjct: 281 QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD 340
Query: 306 QLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEH 364
+ + N MI+ Y + G AL LF ++ + E +LS V + + +
Sbjct: 341 NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 365 GSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQ 424
G Q + +AIKS + VA++ ++MY K ++ + +F ++ +RD VSWN I+ Q
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 460
Query: 425 NGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEE 484
NG+ ETL +F +L + PD T ++L AC GG + GM + S++ + G+
Sbjct: 461 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSS 518
Query: 485 HYACIIDLLCQAGQLGKA----------IDITSTMP---------FQPGCSIWESILRAS 525
+ID+ + G + +A +++ TM Q C W SI+
Sbjct: 519 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 578
Query: 526 AIYGDVKLTENVAERMMDLQL-PSPLPYS 553
+ + + + RMM++ + P Y+
Sbjct: 579 VMKEQSEDAQMLFTRMMEMGITPDKFTYA 607
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 194/381 (50%), Gaps = 24/381 (6%)
Query: 100 ALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLSTVSS 159
+L+VF IPE + VSW+++I+G AL+ F +MQ S ++ +L + ++
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 160 ACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNS 216
G Q+H ++S + +V +L DMY K + A +F N E L+ S+N+
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATL-DMYAKCDNMQDAQILFDNSENLNRQSYNA 352
Query: 217 LISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVG 276
+I+G +G AL F+ + SG DE ++S V AC ++ L +G Q++ L++K
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 277 FLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQ 336
+ V +A ID++ KC L ++ R+F+++ R D N +I+ + + G G L LF
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 337 LMLREDIRPTEFTLSCVLSSIPIPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGS 396
MLR I P EFT +L + + +G + HS +KSG SN+ V SL++MY+K G
Sbjct: 473 SMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 397 IDSSTEIFVKLDKRD--------------------LVSWNTIMMGLTQNGRAAETLDVFE 436
I+ + +I + +R VSWN+I+ G ++ + +F
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 437 ELLEEGLPPDRITLAAVLLAC 457
++E G+ PD+ T A VL C
Sbjct: 593 RMMEMGITPDKFTYATVLDTC 613
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 288 bits (737), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 158/499 (31%), Positives = 270/499 (54%), Gaps = 35/499 (7%)
Query: 163 GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCF 222
GK I + + L N+ N+++ Y K G+L A VF +M E D++SWN+++ G
Sbjct: 96 GKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYA 155
Query: 223 NSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSI 282
G AL + R SG +E++ + ++ AC K R L +Q + GFLSN +
Sbjct: 156 QDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVV 215
Query: 283 VLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYG------------------- 323
+ + ID ++KC ++E + R F+++ D + +IS Y
Sbjct: 216 LSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKN 275
Query: 324 ------------RYGFGEVALELFQLMLREDIRPTEFTLS-CVLSSIPIPPVEHGSQFHS 370
R G G AL+LF+ M+ ++P +FT S C+ +S I + HG + H
Sbjct: 276 PVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHG 335
Query: 371 MAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIF-VKLDKRDLVSWNTIMMGLTQNGRAA 429
I++ NA+V SSL++MY+K+GS+++S +F + DK D V WNT++ L Q+G
Sbjct: 336 YMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGH 395
Query: 430 ETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACI 489
+ L + +++++ + P+R TL +L AC++ G V++G+ F +M ++G++P +EHYAC+
Sbjct: 396 KALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACL 455
Query: 490 IDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSP 549
IDLL +AG + + MPF+P IW +IL I+G+ +L + A+ ++ L S
Sbjct: 456 IDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESS 515
Query: 550 LPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRI--YTFNAGELQHHG 607
PY LL+ YA G+WE + +++ VM+K +NK SWI I+ ++ +T + G H
Sbjct: 516 APYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHAR 575
Query: 608 GQKIYLVLRLLTWEMEDEG 626
++IY +L L +E+E
Sbjct: 576 KEEIYFILHNLAAVIEEEA 594
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 214/443 (48%), Gaps = 46/443 (10%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFN-AHTYLGNRCLDLYSRFGTSDDVLQLFDEIP 77
+ L+ +C KS K IH HL GF +T L N + +Y + G D ++FD++
Sbjct: 50 ASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMH 109
Query: 78 QKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSK 137
+N SWN + G +KS L A VFD +PE DVVSWN+M+ GYA G AL + +
Sbjct: 110 LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKE 169
Query: 138 MQLQGVRPSGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDM----- 189
+ G++ + F+F+ LL+ + +Q HG ++ +G LSNVVL S+ID
Sbjct: 170 FRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGF-LSNVVLSCSIIDAYAKCG 228
Query: 190 --------------------------YGKLGVLYYAFGVFLNMEELDIISWNSLISGCFN 223
Y KLG + A +F M E + +SW +LI+G
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 224 SGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIV 283
G G ALD F M G P+++T S + A + +L GK++ ++ N+IV
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 284 LSATIDLFSKCNRLEDSVRLFEQL-DRWDYAVINVMISTYGRYGFGEVALELFQLMLRED 342
+S+ ID++SK LE S R+F D+ D N MIS ++G G AL + M++
Sbjct: 349 ISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR 408
Query: 343 IRPTEFTLSCVLSSIPIPP-VEHGSQ-FHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSS 400
++P TL +L++ VE G + F SM ++ G + + L+++ + G
Sbjct: 409 VQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCF--- 465
Query: 401 TEIFVKLDKR----DLVSWNTIM 419
E+ K+++ D WN I+
Sbjct: 466 KELMRKIEEMPFEPDKHIWNAIL 488
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 177/343 (51%), Gaps = 9/343 (2%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKN 80
L+ C+ + + HG + GF ++ L +D Y++ G + + FDE+ K+
Sbjct: 185 LLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD 244
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
W + G K +++ A K+F E+PE + VSW ++I+GY G + AL++F KM
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 141 QGVRPSGFTFSILL---STVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLY 197
GV+P FTFS L ++++S HGK+IHG MIR+ + N ++ +SLIDMY K G L
Sbjct: 305 LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVR-PNAIVISSLIDMYSKSGSLE 363
Query: 198 YAFGVF-LNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINAC 256
+ VF + ++ D + WN++IS G G AL M P+ T+ +++NAC
Sbjct: 364 ASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNAC 423
Query: 257 TKLRNLDKGKQVF-ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLD-RWDYAV 314
+ +++G + F +++V+ G + + + IDL + ++ +R E++ D +
Sbjct: 424 SHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHI 483
Query: 315 INVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSI 357
N ++ +G E+ + +++ D P +LSSI
Sbjct: 484 WNAILGVCRIHGNEELGKKAADELIKLD--PESSAPYILLSSI 524
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 287 bits (735), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 175/614 (28%), Positives = 317/614 (51%), Gaps = 41/614 (6%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S+L+ S K FD + +HG + K G+ + Y+G+ +D+Y+
Sbjct: 105 SRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYA----------------- 147
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
K + ++ A + F EI EP+ VSWN++I+G+ A + M
Sbjct: 148 --------------KCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLM 193
Query: 139 QLQG-VRPSGFTFSILLSTVSSA--CHG-KQIHGSMIRSGLSLSNVVLGNSLIDMYGKLG 194
+++ V TF+ LL+ + C+ KQ+H +++ GL + + N++I Y G
Sbjct: 194 EMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQ-HEITICNAMISSYADCG 252
Query: 195 VLYYAFGVFLNME-ELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVI 253
+ A VF + D+ISWNS+I+G E A + F M+ D YT + ++
Sbjct: 253 SVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLL 312
Query: 254 NACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSK--CNRLEDSVRLFEQLDRWD 311
+AC+ + GK + + +K G + +A I ++ + +ED++ LFE L D
Sbjct: 313 SACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKD 372
Query: 312 YAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHS 370
N +I+ + + G E A++ F + +I+ ++ S +L S + ++ G Q H+
Sbjct: 373 LISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHA 432
Query: 371 MAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLD-KRDLVSWNTIMMGLTQNGRAA 429
+A KSGF SN V SSL+ MY+K G I+S+ + F ++ K V+WN +++G Q+G
Sbjct: 433 LATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQ 492
Query: 430 ETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACI 489
+LD+F ++ + + D +T A+L AC++ G + +G+ + + M+ Y + P EHYA
Sbjct: 493 VSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAA 552
Query: 490 IDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSP 549
+DLL +AG + KA ++ +MP P + ++ L G++++ VA +++++
Sbjct: 553 VDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDH 612
Query: 550 LPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQ 609
Y L+ Y+ +WE VKK+M++ G+ KV G SWI I+N++ FNA + + Q
Sbjct: 613 FTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQ 672
Query: 610 KIYLVLRLLTWEME 623
IY++++ LT EM+
Sbjct: 673 DIYMMIKDLTQEMQ 686
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 231/506 (45%), Gaps = 53/506 (10%)
Query: 38 HGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKSDNL 97
H + K G + Y+ NR LD Y +FG L
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGF-------------------------------L 51
Query: 98 DTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLSTV 157
A +FDE+P+ D VSWN+MISGY SCG + A +F+ M+ G G++FS LL +
Sbjct: 52 GYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGI 111
Query: 158 SSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISW 214
+S G+Q+HG +I+ G NV +G+SL+DMY K + AF F + E + +SW
Sbjct: 112 ASVKRFDLGEQVHGLVIKGGYE-CNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSW 170
Query: 215 NSLISGC-----FNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVF 269
N+LI+G + + L L + + + D T + ++ + KQV
Sbjct: 171 NALIAGFVQVRDIKTAFWLLGLMEM----KAAVTMDAGTFAPLLTLLDDPMFCNLLKQVH 226
Query: 270 ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQL-DRWDYAVINVMISTYGRYGFG 328
A +K+G + +A I ++ C + D+ R+F+ L D N MI+ + ++
Sbjct: 227 AKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELK 286
Query: 329 EVALELFQLMLREDIRPTEFTLSCVLSSIPIPPVEH---GSQFHSMAIKSGFDSNAVVAS 385
E A ELF M R + +T + +LS+ EH G H M IK G + +
Sbjct: 287 ESAFELFIQMQRHWVETDIYTYTGLLSA--CSGEEHQIFGKSLHGMVIKKGLEQVTSATN 344
Query: 386 SLMEMYAK--TGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGL 443
+L+ MY + TG+++ + +F L +DL+SWN+I+ G Q G + + + F L +
Sbjct: 345 ALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEI 404
Query: 444 PPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAI 503
D +A+L +C+ + G + A+ + G + E + +I + + G + A
Sbjct: 405 KVDDYAFSALLRSCSDLATLQLGQQI-HALATKSGFVSNEFVISSLIVMYSKCGIIESAR 463
Query: 504 DITSTMPFQPGCSIWESILRASAIYG 529
+ + W +++ A +G
Sbjct: 464 KCFQQISSKHSTVAWNAMILGYAQHG 489
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 286 bits (733), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/542 (30%), Positives = 290/542 (53%), Gaps = 7/542 (1%)
Query: 88 LRGLLKSDNL-DTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPS 146
L G+ NL + +L+VFDE+PE DV SWN++IS + G ++ ALE+F +M+ G P+
Sbjct: 148 LVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPN 207
Query: 147 GFTFSILLSTVSSAC---HGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVF 203
+ ++ +S S GK+IH ++ G L V ++L+DMYGK L A VF
Sbjct: 208 SVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV-NSALVDMYGKCDCLEVAREVF 266
Query: 204 LNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLD 263
M +++WNS+I G G + ++ M G P + T++ ++ AC++ RNL
Sbjct: 267 QKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLL 326
Query: 264 KGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYG 323
GK + ++ ++ V + IDL+ KC + +F + + NVMIS+Y
Sbjct: 327 HGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYI 386
Query: 324 RYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAV 382
G A+E++ M+ ++P T + VL + + +E G Q H +S +++ +
Sbjct: 387 SVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL 446
Query: 383 VASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEG 442
+ S+L++MY+K G+ + IF + K+D+VSW ++ +G+ E L F+E+ + G
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Query: 443 LPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKA 502
L PD +TL AVL AC + G +D+G+ FS M+ +YG+ P EHY+C+ID+L +AG+L +A
Sbjct: 507 LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEA 566
Query: 503 IDITSTMP-FQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAM 561
+I P + ++ A ++ + L + +A +++ Y +L YA
Sbjct: 567 YEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYAS 626
Query: 562 RGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWE 621
W+A RV+ M++ G+ K GCSWI + +++ F A + H + +Y L LL+
Sbjct: 627 GESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGH 686
Query: 622 ME 623
ME
Sbjct: 687 ME 688
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 228/440 (51%), Gaps = 9/440 (2%)
Query: 99 TALKVFDEIP-EPDVVSWNSMISGYASCGYSDYALEMFSKM-QLQGVRPSGFTFSILLST 156
+A VF+ DV WNS++SGY+ LE+F ++ P FTF ++
Sbjct: 57 SARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA 116
Query: 157 VSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIIS 213
+ G+ IH +++SG + +VV+ +SL+ MY K + + VF M E D+ S
Sbjct: 117 YGALGREFLGRMIHTLVVKSGY-VCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVAS 175
Query: 214 WNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSV 273
WN++IS + SG E AL+ F M SG+ P+ ++++ I+AC++L L++GK++ V
Sbjct: 176 WNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCV 235
Query: 274 KVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALE 333
K GF + V SA +D++ KC+ LE + +F+++ R N MI Y G + +E
Sbjct: 236 KKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVE 295
Query: 334 LFQLMLREDIRPTEFTLSCVLSSIPIPP-VEHGSQFHSMAIKSGFDSNAVVASSLMEMYA 392
+ M+ E RP++ TL+ +L + + HG H I+S +++ V SL+++Y
Sbjct: 296 ILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYF 355
Query: 393 KTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAA 452
K G + + +F K K SWN ++ G + ++V+++++ G+ PD +T +
Sbjct: 356 KCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTS 415
Query: 453 VLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQ 512
VL AC+ ++KG + ++ E + E + ++D+ + G +A I +++P +
Sbjct: 416 VLPACSQLAALEKGKQIHLSISESR-LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 513 PGCSIWESILRASAIYGDVK 532
S W ++ A +G +
Sbjct: 475 DVVS-WTVMISAYGSHGQPR 493
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 191/395 (48%), Gaps = 44/395 (11%)
Query: 14 SLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLF 73
++S CS+L+ + K IH K GF Y+ + +D+Y + + ++F
Sbjct: 214 AISACSRLL-------WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVF 266
Query: 74 DEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALE 133
++P+K+ ++W NSMI GY + G S +E
Sbjct: 267 QKMPRKSLVAW-------------------------------NSMIKGYVAKGDSKSCVE 295
Query: 134 MFSKMQLQGVRPSGFTFSILLSTVSSA---CHGKQIHGSMIRSGLSLSNVVLGNSLIDMY 190
+ ++M ++G RPS T + +L S + HGK IHG +IRS ++ +++ + SLID+Y
Sbjct: 296 ILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN-ADIYVNCSLIDLY 354
Query: 191 GKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTIS 250
K G A VF ++ SWN +IS + G A++ + M G PD T +
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 251 IVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRW 310
V+ AC++L L+KGKQ+ + ++ ++LSA +D++SKC +++ R+F + +
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 311 DYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPP-VEHGSQFH 369
D VMIS YG +G AL F M + ++P TL VLS+ ++ G +F
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFF 534
Query: 370 S-MAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEI 403
S M K G + S ++++ + G + + EI
Sbjct: 535 SQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEI 569
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 138/300 (46%), Gaps = 36/300 (12%)
Query: 11 NKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVL 70
+ S + + ++ C ++ K IHG++ + NA Y+ +DLY + G ++
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 71 QLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDY 130
+F + + SWN+ + + N A++V+D+ M+S
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQ-----------MVS---------- 403
Query: 131 ALEMFSKMQLQGVRPSGFTFSILL---STVSSACHGKQIHGSMIRSGLSLSNVVLGNSLI 187
GV+P TF+ +L S +++ GKQIH S+ S L ++L ++L+
Sbjct: 404 ----------VGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL-SALL 452
Query: 188 DMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEY 247
DMY K G AF +F ++ + D++SW +IS + G AL QF M+ G PD
Sbjct: 453 DMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGV 512
Query: 248 TISIVINACTKLRNLDKGKQVFA-LSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQ 306
T+ V++AC +D+G + F+ + K G S ID+ + RL ++ + +Q
Sbjct: 513 TLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 369 HSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKR-DLVSWNTIMMGLTQNGR 427
H + G + V+ SL+ +Y S+ +F D R D+ WN++M G ++N
Sbjct: 27 HQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSM 86
Query: 428 AAETLDVFEELLEEGL-PPDRITLAAVLLACNYGGF 462
+TL+VF+ LL + PD T V+ A YG
Sbjct: 87 FHDTLEVFKRLLNCSICVPDSFTFPNVIKA--YGAL 120
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 286 bits (732), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 179/571 (31%), Positives = 302/571 (52%), Gaps = 38/571 (6%)
Query: 95 DNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILL 154
+ L A+ VF I EP+++ WN+M G+A AL+++ M G+ P+ +TF +L
Sbjct: 82 EGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL 141
Query: 155 STVSSAC---HGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVL--------------- 196
+ + + G+QIHG +++ G L ++ + SLI MY + G L
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGCDL-DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 197 ---------YYAFGVFLNMEEL-------DIISWNSLISGCFNSGYGELALDQFYSMRYS 240
Y + G N ++L D++SWN++ISG +G + AL+ F M +
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 241 GYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDS 300
PDE T+ V++AC + +++ G+QV GF SN +++A IDL+SKC LE +
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 301 VRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-I 359
LFE+L D N +I Y + AL LFQ MLR P + T+ +L + +
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 360 PPVEHGSQFHSMAIK--SGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNT 417
++ G H K G + + + +SL++MYAK G I+++ ++F + + L SWN
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440
Query: 418 IMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEY 477
++ G +GRA + D+F + + G+ PD IT +L AC++ G +D G +F M ++Y
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 500
Query: 478 GVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENV 537
+ P EHY C+IDLL +G +A ++ + M +P IW S+L+A ++G+V+L E+
Sbjct: 501 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 560
Query: 538 AERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYT 597
AE ++ ++ +P Y LL+ YA GRW + + + ++ G+ KV GCS I I + ++
Sbjct: 561 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 620
Query: 598 FNAGELQHHGGQKIYLVLRLLTWEMEDEGCV 628
F G+ H ++IY +L + +E G V
Sbjct: 621 FIIGDKFHPRNREIYGMLEEMEVLLEKAGFV 651
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 183/345 (53%), Gaps = 14/345 (4%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKN 80
++ C K+F + IHGH+ KLG + Y+ + +Y + G +D ++FD+ P ++
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
+S+ ++G ++ A K+FDEIP DVVSWN+MISGYA G ALE+F M
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 141 QGVRPSGFTFSILLSTVSSACH-------GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKL 193
VRP T + TV SAC G+Q+H + G SN+ + N+LID+Y K
Sbjct: 260 TNVRPDEST----MVTVVSACAQSGSIELGRQVHLWIDDHGFG-SNLKIVNALIDLYSKC 314
Query: 194 GVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVI 253
G L A G+F + D+ISWN+LI G + + AL F M SG +P++ T+ ++
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374
Query: 254 NACTKLRNLDKGK--QVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWD 311
AC L +D G+ V+ G + S + ++ ID+++KC +E + ++F +
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 312 YAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSS 356
+ N MI + +G + + +LF M + I+P + T +LS+
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 93 KSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSI 152
K +++ A +VF+ I + SWN+MI G+A G +D + ++FS+M+ G++P TF
Sbjct: 416 KCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVG 475
Query: 153 LLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEEL 209
LLS S + G+ I +M + + +ID+ G G+ A + ME
Sbjct: 476 LLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEME 535
Query: 210 -DIISWNSLISGCFNSGYGELA 230
D + W SL+ C G EL
Sbjct: 536 PDGVIWCSLLKACKMHGNVELG 557
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/565 (30%), Positives = 296/565 (52%), Gaps = 41/565 (7%)
Query: 104 FDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLSTVSSACH- 162
F + P V++W S+I + AL F +M+ G P F +L + +
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 163 --GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKL---------GVLY-------------- 197
G+ +HG ++R G+ ++ GN+L++MY KL G ++
Sbjct: 122 RFGESVHGFIVRLGMDC-DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 198 -------YAFG------VFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSP 244
FG VF M D++S+N++I+G SG E AL M + P
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 245 DEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLF 304
D +T+S V+ ++ ++ KGK++ ++ G S+ + S+ +D+++K R+EDS R+F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 305 EQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPPVEH 364
+L D N +++ Y + G AL LF+ M+ ++P S V+ + H
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 365 -GSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLT 423
G Q H ++ GF SN +AS+L++MY+K G+I ++ +IF +++ D VSW I+MG
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 424 QNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGE 483
+G E + +FEE+ +G+ P+++ AVL AC++ G VD+ F++M + YG+
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480
Query: 484 EHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMD 543
EHYA + DLL +AG+L +A + S M +P S+W ++L + +++ +++L E VAE++
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540
Query: 544 LQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGEL 603
+ + Y L+ YA GRW+ + +++ MRK G+ K CSWI +KN+ + F +G+
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDR 600
Query: 604 QHHGGQKIYLVLRLLTWEMEDEGCV 628
H KI L+ + +ME EG V
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKEGYV 625
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 227/449 (50%), Gaps = 16/449 (3%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRF---GTSDDVLQLFDEIP 77
++ C F +++HG + +LG + Y GN +++Y++ G+ V +FDE+P
Sbjct: 111 VLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMP 170
Query: 78 QK--NCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMF 135
Q+ N ++ + +D+ +VF+ +P DVVS+N++I+GYA G + AL M
Sbjct: 171 QRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMV 230
Query: 136 SKMQLQGVRPSGFTFSILLSTVSS---ACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGK 192
+M ++P FT S +L S GK+IHG +IR G+ S+V +G+SL+DMY K
Sbjct: 231 REMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID-SDVYIGSSLVDMYAK 289
Query: 193 LGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIV 252
+ + VF + D ISWNSL++G +G AL F M + P S V
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSV 349
Query: 253 INACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDY 312
I AC L L GKQ+ ++ GF SN + SA +D++SKC ++ + ++F++++ D
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409
Query: 313 AVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPPV--EHGSQFHS 370
+I + +G G A+ LF+ M R+ ++P + VL++ + E F+S
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469
Query: 371 MAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVS-WNTIMMGLTQNGRAA 429
M G + +++ ++ + G ++ + K+ S W+T++ + +
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH---- 525
Query: 430 ETLDVFEELLEEGLPPDRITLAAVLLACN 458
+ L++ E++ E+ D + A +L CN
Sbjct: 526 KNLELAEKVAEKIFTVDSENMGAYVLMCN 554
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 191/431 (44%), Gaps = 79/431 (18%)
Query: 155 STVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISW 214
+ + S KQ+H IR+ SLS+ + +I +Y L +L+ A +F ++ +++W
Sbjct: 16 TRIKSKSQAKQLHAQFIRTQ-SLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAW 73
Query: 215 NSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVK 274
S+I + AL F MR SG PD V+ +CT + +L G+ V V+
Sbjct: 74 KSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVR 133
Query: 275 VGFLSNSIVLSATIDLFSK---------------------CNRLEDSV------------ 301
+G + +A +++++K N ++ V
Sbjct: 134 LGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGID 193
Query: 302 ---RLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP 358
R+FE + R D N +I+ Y + G E AL + + M D++P FTLS VL P
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL---P 250
Query: 359 I----PPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVS 414
I V G + H I+ G DS+ + SSL++MYAK+ I+ S +F +L RD +S
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 415 WNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNY--------------- 459
WN+++ G QNGR E L +F +++ + P + ++V+ AC +
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 460 -GGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIW 518
GGF G +F A + ++D+ + G + A I M S W
Sbjct: 371 RGGF---GSNIFIA--------------SALVDMYSKCGNIKAARKIFDRMNVLDEVS-W 412
Query: 519 ESILRASAIYG 529
+I+ A++G
Sbjct: 413 TAIIMGHALHG 423
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 8 AHVNKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSD 67
A V ++++ S +I C + K +HG++ + GF ++ ++ + +D+YS+ G
Sbjct: 337 AKVKPGAVAF-SSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIK 395
Query: 68 DVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGY 127
++FD + V DE VSW ++I G+A G+
Sbjct: 396 AARKIFDR-------------------------MNVLDE------VSWTAIIMGHALHGH 424
Query: 128 SDYALEMFSKMQLQGVRPSGFTFSILLSTVSSACHGKQIHG---SMIRS-GLSLSNVVLG 183
A+ +F +M+ QGV+P+ F +L+ S + G SM + GL+ +
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN-QELEHY 483
Query: 184 NSLIDMYGKLGVLYYAFGVFLNM-EELDIISWNSLISGC 221
++ D+ G+ G L A+ M E W++L+S C
Sbjct: 484 AAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 187/626 (29%), Positives = 310/626 (49%), Gaps = 39/626 (6%)
Query: 6 KKAHVNKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGT 65
K V S S+ L C ++ F + IH + K+G + Y+ L +YS+ G
Sbjct: 264 KNNSVKLVSTSFTGAL-GACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM 322
Query: 66 SDDVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASC 125
+ +F +C+ +D L++ WN+M++ YA
Sbjct: 323 VGEAETVF------SCV--------------VDKRLEI-----------WNAMVAAYAEN 351
Query: 126 GYSDYALEMFSKMQLQGVRPSGFTFSILLSTVSSAC---HGKQIHGSMIRSGLSLSNVVL 182
Y AL++F M+ + V P FT S ++S S +GK +H + + + S +
Sbjct: 352 DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQ-STSTI 410
Query: 183 GNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGY 242
++L+ +Y K G A+ VF +MEE D+++W SLISG +G + AL F M+
Sbjct: 411 ESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDD 470
Query: 243 S--PDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDS 300
S PD ++ V NAC L L G QV +K G + N V S+ IDL+SKC E +
Sbjct: 471 SLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMA 530
Query: 301 VRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-I 359
+++F + + N MIS Y R E++++LF LML + I P +++ VL +I
Sbjct: 531 LKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISST 590
Query: 360 PPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIM 419
+ G H ++ G S+ + ++L++MY K G + IF K+ + L++WN ++
Sbjct: 591 ASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMI 650
Query: 420 MGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGV 479
G +G L +F+E+ + G PD +T +++ ACN+ GFV++G +F MK++YG+
Sbjct: 651 YGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGI 710
Query: 480 MPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAE 539
P EHYA ++DLL +AG L +A MP + SIW +L AS + +V+L AE
Sbjct: 711 EPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAE 770
Query: 540 RMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFN 599
+++ ++ Y L Y G ++ +M++ G++K GCSWI + +R F
Sbjct: 771 KLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFF 830
Query: 600 AGELQHHGGQKIYLVLRLLTWEMEDE 625
+G +I+ VL L M DE
Sbjct: 831 SGGSSSPMKAEIFNVLNRLKSNMVDE 856
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/511 (26%), Positives = 251/511 (49%), Gaps = 36/511 (7%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKN 80
L+ C + + + KTIHG + LG+ ++ +++Y + G D +Q+FD
Sbjct: 66 LLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD------ 119
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
W+ G + DV WNSMI GY + F +M +
Sbjct: 120 --GWSQSQSG----------------VSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLV 161
Query: 141 QGVRPSGFTFSILLSTVSSACH-----GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGV 195
GVRP F+ SI++S + + GKQIHG M+R+ L ++ L +LIDMY K G+
Sbjct: 162 FGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLD-TDSFLKTALIDMYFKFGL 220
Query: 196 LYYAFGVFLNMEEL-DIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVIN 254
A+ VF+ +E+ +++ WN +I G SG E +LD + + + + + +
Sbjct: 221 SIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALG 280
Query: 255 ACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAV 314
AC++ N G+Q+ VK+G ++ V ++ + ++SKC + ++ +F + +
Sbjct: 281 ACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEI 340
Query: 315 INVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPPV-EHGSQFHSMAI 373
N M++ Y +G AL+LF M ++ + P FTLS V+S + + +G H+
Sbjct: 341 WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELF 400
Query: 374 KSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLD 433
K S + + S+L+ +Y+K G + +F ++++D+V+W +++ GL +NG+ E L
Sbjct: 401 KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALK 460
Query: 434 VFEELL--EEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIID 491
VF ++ ++ L PD + +V AC + G+ V +M + G++ + +ID
Sbjct: 461 VFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLID 519
Query: 492 LLCQAGQLGKAIDITSTMPFQPGCSIWESIL 522
L + G A+ + ++M + + W S++
Sbjct: 520 LYSKCGLPEMALKVFTSMSTENMVA-WNSMI 549
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 217/439 (49%), Gaps = 37/439 (8%)
Query: 34 AKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLK 93
K IHG + + + ++L +D+Y +FG S D ++F EI K+
Sbjct: 189 GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKS------------- 235
Query: 94 SDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSIL 153
+VV WN MI G+ G + +L+++ + V+ +F+
Sbjct: 236 -----------------NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGA 278
Query: 154 LSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELD 210
L S + + G+QIH +++ GL ++ + SL+ MY K G++ A VF + +
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLH-NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKR 337
Query: 211 IISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFA 270
+ WN++++ + YG ALD F MR PD +T+S VI+ C+ L + GK V A
Sbjct: 338 LEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHA 397
Query: 271 LSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEV 330
K S S + SA + L+SKC D+ +F+ ++ D +IS + G +
Sbjct: 398 ELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKE 457
Query: 331 ALELFQLMLRED--IRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSL 387
AL++F M +D ++P ++ V ++ + + G Q H IK+G N V SSL
Sbjct: 458 ALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSL 517
Query: 388 MEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDR 447
+++Y+K G + + ++F + ++V+WN+++ ++N ++D+F +L +G+ PD
Sbjct: 518 IDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDS 577
Query: 448 ITLAAVLLACNYGGFVDKG 466
+++ +VL+A + + KG
Sbjct: 578 VSITSVLVAISSTASLLKG 596
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 206/471 (43%), Gaps = 65/471 (13%)
Query: 113 VSWNSMISGYASCGYSDYALEMFSKMQLQGVRP---SGFTFSILL---STVSSACHGKQI 166
S NS I G AL ++SK G P S FTF LL S +++ +GK I
Sbjct: 25 ASINSGIRALIQKGEYLQALHLYSKHD--GSSPFWTSVFTFPSLLKACSALTNLSYGKTI 82
Query: 167 HGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVF-------LNMEELDIISWNSLIS 219
HGS++ G + + SL++MY K G L YA VF + D+ WNS+I
Sbjct: 83 HGSVVVLGWRY-DPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMID 141
Query: 220 GCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNL--DKGKQVFALSVKVGF 277
G F + + F M G PD +++SIV++ K N ++GKQ+ ++
Sbjct: 142 GYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSL 201
Query: 278 LSNSIVLSATIDLFSKCNRLEDSVRLFEQL-DRWDYAVINVMISTYGRYGFGEVALELFQ 336
++S + +A ID++ K D+ R+F ++ D+ + + NVMI +G G E +L+L+
Sbjct: 202 DTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM 261
Query: 337 LMLREDIRPTEFTLSCVLSSIPIPPVE-HGSQFHSMAIKSGFDSNAVVASSLMEMYAKTG 395
L ++ + + L + G Q H +K G ++ V +SL+ MY+K G
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG 321
Query: 396 SIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLL 455
+ + +F + + L WN ++ +N LD+F + ++ + PD TL+ V+
Sbjct: 322 MVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 456 AC------NYGGFVDKGM-----------------------------LVFSAMKEEYGVM 480
C NYG V + LVF +M+E+ V
Sbjct: 382 CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVA 441
Query: 481 PGEEHYACIIDLLCQAGQLGKAIDITSTMP-----FQPGCSIWESILRASA 526
G +I LC+ G+ +A+ + M +P I S+ A A
Sbjct: 442 WGS-----LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACA 487
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/600 (28%), Positives = 306/600 (51%), Gaps = 42/600 (7%)
Query: 28 FKSFDFAKT---IHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISW 84
F S D A+ +H + KLG++++ ++G ++ YS G+
Sbjct: 156 FVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGS------------------- 196
Query: 85 NICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVR 144
+D+A VF+ I D+V W ++S Y GY + +L++ S M++ G
Sbjct: 197 ------------VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFM 244
Query: 145 PSGFTFSILLST---VSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFG 201
P+ +TF L + + K +HG ++++ L V G L+ +Y +LG + AF
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV-GVGLLQLYTQLGDMSDAFK 303
Query: 202 VFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRN 261
VF M + D++ W+ +I+ +G+ A+D F MR + P+E+T+S ++N C +
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 262 LDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMIST 321
G+Q+ L VKVGF + V +A ID+++KC +++ +V+LF +L + N +I
Sbjct: 364 SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423
Query: 322 YGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSN 380
Y G G A +F+ LR + TE T S L + + ++ G Q H +AIK+
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 381 AVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLE 440
V++SL++MYAK G I + +F +++ D+ SWN ++ G + +G + L + + + +
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 441 EGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLG 500
P+ +T VL C+ G +D+G F +M ++G+ P EHY C++ LL ++GQL
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 501 KAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYA 560
KA+ + +P++P IW ++L AS + + AE ++ + Y L++ YA
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYA 663
Query: 561 MRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTW 620
+W + ++K M++ G+ K G SWI + ++ F+ G L H K L+ +L W
Sbjct: 664 GAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVG-LSDHPDMK--LINGMLEW 720
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 140/575 (24%), Positives = 254/575 (44%), Gaps = 77/575 (13%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKN 80
++ RC+ AK IH + K G CLDL++
Sbjct: 55 MLRRCIQKNDPISAKAIHCDILKKG---------SCLDLFAT------------------ 87
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
NI L +K+ AL +FDE+PE + VS+ ++ GYA + ++S++
Sbjct: 88 ----NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHR 139
Query: 141 QG--VRPSGFT-FSILLSTVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLY 197
+G + P FT F L ++ A +H +++ G SN +G +LI+ Y G +
Sbjct: 140 EGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYD-SNAFVGAALINAYSVCGSVD 198
Query: 198 YAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACT 257
A VF + DI+ W ++S +GY E +L MR +G+ P+ YT + A
Sbjct: 199 SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASI 258
Query: 258 KLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINV 317
L D K V +K ++ + V + L+++ + D+ ++F ++ + D +
Sbjct: 259 GLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSF 318
Query: 318 MISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPPVEH-GSQFHSMAIKSG 376
MI+ + + GF A++LF M + P EFTLS +L+ I G Q H + +K G
Sbjct: 319 MIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG 378
Query: 377 FDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFE 436
FD + V+++L+++YAK +D++ ++F +L ++ VSWNT+++G G + +F
Sbjct: 379 FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFR 438
Query: 437 ELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQA 496
E L + +T ++ L AC +D G+ V
Sbjct: 439 EALRNQVSVTEVTFSSALGACASLASMDLGVQVH-------------------------- 472
Query: 497 GQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLT 556
G AI + ++ S++ A GD+K ++V M + + S ++ L
Sbjct: 473 ---GLAIKTNNAKKV----AVSNSLIDMYAKCGDIKFAQSVFNEMETIDVAS---WNALI 522
Query: 557 QAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGI 591
Y+ G +R+ +M+ K G +++G+
Sbjct: 523 SGYSTHGLGRQALRILDIMKDRDC-KPNGLTFLGV 556
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 132/291 (45%), Gaps = 36/291 (12%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S +++ C K + +HG + K+GF+ Y+ N +D+Y++ D ++LF E+
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSS 411
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
KN +S WN++I GY + G A MF +
Sbjct: 412 KNEVS-------------------------------WNTVIVGYENLGEGGKAFSMFREA 440
Query: 139 QLQGVRPSGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGV 195
V + TFS L +S G Q+HG I++ + V + NSLIDMY K G
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTN-NAKKVAVSNSLIDMYAKCGD 499
Query: 196 LYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINA 255
+ +A VF ME +D+ SWN+LISG G G AL M+ P+ T V++
Sbjct: 500 IKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSG 559
Query: 256 CTKLRNLDKGKQVFALSVKVGFLSNSIV-LSATIDLFSKCNRLEDSVRLFE 305
C+ +D+G++ F ++ + + + + L + +L+ +++L E
Sbjct: 560 CSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIE 610
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 284 bits (726), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/444 (34%), Positives = 258/444 (58%), Gaps = 2/444 (0%)
Query: 163 GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCF 222
K HG +IR L +V L N LI+ Y K G + A VF M E ++SWN++I
Sbjct: 80 AKACHGKIIRIDLE-GDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 138
Query: 223 NSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSI 282
+ ALD F MR G+ E+TIS V++AC + + K++ LSVK N
Sbjct: 139 RNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLY 198
Query: 283 VLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLRED 342
V +A +DL++KC ++D+V++FE + + M++ Y + E AL L++ R
Sbjct: 199 VGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMS 258
Query: 343 IRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSST 401
+ +FTLS V+ + + + G Q H++ KSGF SN VASS ++MYAK GS+ S
Sbjct: 259 LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 318
Query: 402 EIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGG 461
IF ++ +++L WNTI+ G ++ R E + +FE++ ++G+ P+ +T +++L C + G
Sbjct: 319 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 378
Query: 462 FVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESI 521
V++G F M+ YG+ P HY+C++D+L +AG L +A ++ ++PF P SIW S+
Sbjct: 379 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 438
Query: 522 LRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGIN 581
L + +Y +++L E AE++ +L+ + + LL+ YA +WE I + +K++R +
Sbjct: 439 LASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVK 498
Query: 582 KVTGCSWIGIKNRIYTFNAGELQH 605
KV G SWI IK++++TF+ GE H
Sbjct: 499 KVRGKSWIDIKDKVHTFSVGESGH 522
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 173/324 (53%), Gaps = 6/324 (1%)
Query: 85 NICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVR 144
N+ + K ++ A +VFD + E +VSWN+MI Y AL++F +M+ +G +
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 145 PSGFTFSILLSTVSSACHG---KQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFG 201
S FT S +LS C K++H +++ + L N+ +G +L+D+Y K G++ A
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDL-NLYVGTALLDLYAKCGMIKDAVQ 218
Query: 202 VFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRN 261
VF +M++ ++W+S+++G + E AL + + +++T+S VI AC+ L
Sbjct: 219 VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 278
Query: 262 LDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMIST 321
L +GKQ+ A+ K GF SN V S+ +D+++KC L +S +F ++ + + N +IS
Sbjct: 279 LIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG 338
Query: 322 YGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSI-PIPPVEHGSQFHS-MAIKSGFDS 379
+ ++ + + LF+ M ++ + P E T S +LS VE G +F M G
Sbjct: 339 FAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSP 398
Query: 380 NAVVASSLMEMYAKTGSIDSSTEI 403
N V S ++++ + G + + E+
Sbjct: 399 NVVHYSCMVDILGRAGLLSEAYEL 422
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 155/342 (45%), Gaps = 6/342 (1%)
Query: 238 RYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRL 297
RYS + + ++ C + + + K +++ + +L+ I+ +SKC +
Sbjct: 53 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 112
Query: 298 EDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSI 357
E + ++F+ + N MI Y R AL++F M E + +EFT+S VLS+
Sbjct: 113 ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
Query: 358 PIP-PVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWN 416
+ + H +++K+ D N V ++L+++YAK G I + ++F + + V+W+
Sbjct: 173 GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWS 232
Query: 417 TIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLAC-NYGGFVDKGMLVFSAMKE 475
+++ G QN E L ++ L ++ TL++V+ AC N ++ + K
Sbjct: 233 SMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS 292
Query: 476 EYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTE 535
+G A +D+ + G L ++ I S + + +W +I+ A + K
Sbjct: 293 GFGSNVFVASSA--VDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHARPKEVM 349
Query: 536 NVAERM-MDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKVMR 576
+ E+M D P+ + +S L G E R K+MR
Sbjct: 350 ILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 391
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 143/312 (45%), Gaps = 41/312 (13%)
Query: 35 KTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKS 94
K +H K + + Y+G LDLY++ G D +Q+F+ + K+ ++W
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTW---------- 231
Query: 95 DNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILL 154
+SM++GY + AL ++ + Q + + FT S ++
Sbjct: 232 ---------------------SSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Query: 155 ---STVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDI 211
S +++ GKQ+H + +SG SNV + +S +DMY K G L ++ +F ++E ++
Sbjct: 271 CACSNLAALIEGKQMHAVICKSGFG-SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNL 329
Query: 212 ISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFAL 271
WN++ISG + + F M+ G P+E T S +++ C +++G++ F L
Sbjct: 330 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 389
Query: 272 -SVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVI--NVMIS--TYGRYG 326
G N + S +D+ + L ++ L + + A I +++ S Y
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLE 449
Query: 327 FGEVALE-LFQL 337
EVA E LF+L
Sbjct: 450 LAEVAAEKLFEL 461
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 40/227 (17%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S +I C + + K +H + K GF ++ ++ + +D+Y++ G+ + +F E+ +
Sbjct: 267 SSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE 326
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
KN W N++ISG+A + +F KM
Sbjct: 327 KNLELW-------------------------------NTIISGFAKHARPKEVMILFEKM 355
Query: 139 QLQGVRPSGFTFSILLSTVSSAC---HGKQIHGSMIRSGLSLS-NVVLGNSLIDMYGKLG 194
Q G+ P+ TFS LLS G++ ++R+ LS NVV + ++D+ G+ G
Sbjct: 356 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAG 414
Query: 195 VLYYAFGVFLNMEELDIIS-WNSLISGCF---NSGYGELALDQFYSM 237
+L A+ + ++ S W SL++ C N E+A ++ + +
Sbjct: 415 LLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFEL 461
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 283 bits (724), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 177/604 (29%), Positives = 297/604 (49%), Gaps = 40/604 (6%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S ++ C + K IH H+ + G L N +D Y + G
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG-------------- 298
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
+ A K+F+ +P +++SW +++SGY A+E+F+ M
Sbjct: 299 -----------------RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Query: 139 QLQGVRPSGFTFSILLSTVSSAC---HGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGV 195
G++P + S +L++ +S G Q+H I++ L ++ + NSLIDMY K
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG-NDSYVTNSLIDMYAKCDC 400
Query: 196 LYYAFGVFLNMEELDIISWNSLISGCFNSGYG-EL--ALDQFYSMRYSGYSPDEYTISIV 252
L A VF D++ +N++I G G EL AL+ F MR+ P T +
Sbjct: 401 LTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSL 460
Query: 253 INACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDY 312
+ A L +L KQ+ L K G + SA ID++S C L+DS +F+++ D
Sbjct: 461 LRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDL 520
Query: 313 AVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSI-PIPPVEHGSQFHSM 371
+ N M + Y + E AL LF + RP EFT + ++++ + V+ G +FH
Sbjct: 521 VIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQ 580
Query: 372 AIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAET 431
+K G + N + ++L++MYAK GS + + + F RD+V WN+++ +G +
Sbjct: 581 LLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKA 640
Query: 432 LDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIID 491
L + E+++ EG+ P+ IT VL AC++ G V+ G+ F M +G+ P EHY C++
Sbjct: 641 LQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVS 699
Query: 492 LLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLP 551
LL +AG+L KA ++ MP +P +W S+L A G+V+L E+ AE +
Sbjct: 700 LLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGS 759
Query: 552 YSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKI 611
+++L+ YA +G W +V++ M+ G+ K G SWIGI ++ F + + H +I
Sbjct: 760 FTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQI 819
Query: 612 YLVL 615
Y VL
Sbjct: 820 YEVL 823
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 151/563 (26%), Positives = 255/563 (45%), Gaps = 56/563 (9%)
Query: 37 IHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKSDN 96
+ L K GF+ Y+G +D Y + G D +FD +P+K+ ++W + G +K
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 97 LDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLST 156
+L++F ++ E +VV P G+ +LST
Sbjct: 230 SYVSLQLFYQLMEDNVV-------------------------------PDGY----ILST 254
Query: 157 VSSACH-------GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEEL 209
V SAC GKQIH ++R GL + + L N LID Y K G + A +F M
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEM-DASLMNVLIDSYVKCGRVIAAHKLFNGMPNK 313
Query: 210 DIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVF 269
+IISW +L+SG + + A++ F SM G PD Y S ++ +C L L G QV
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVH 373
Query: 270 ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFG- 328
A ++K ++S V ++ ID+++KC+ L D+ ++F+ D + N MI Y R G
Sbjct: 374 AYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQW 433
Query: 329 --EVALELFQLMLREDIRPTEFTLSCVL-SSIPIPPVEHGSQFHSMAIKSGFDSNAVVAS 385
AL +F+ M IRP+ T +L +S + + Q H + K G + + S
Sbjct: 434 ELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGS 493
Query: 386 SLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPP 445
+L+++Y+ + S +F ++ +DLV WN++ G Q E L++F EL P
Sbjct: 494 ALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERP 553
Query: 446 DRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQ---LGKA 502
D T A ++ A V G F + G+ ++D+ + G KA
Sbjct: 554 DEFTFANMVTAAGNLASVQLGQ-EFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKA 612
Query: 503 IDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQL-PSPLPYSLLTQAYAM 561
D ++ W S++ + A +G+ K + E+MM + P+ + + + A +
Sbjct: 613 FDSAASRD----VVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSH 668
Query: 562 RGRWEAIVRVKKVMRKNGINKVT 584
G E ++ ++M + GI T
Sbjct: 669 AGLVEDGLKQFELMLRFGIEPET 691
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 198/423 (46%), Gaps = 40/423 (9%)
Query: 12 KASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQ 71
K + CS ++ C S + F +H + K +Y+ N +D+Y+
Sbjct: 347 KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA---------- 396
Query: 72 LFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYS--- 128
K D L A KVFD DVV +N+MI GY+ G
Sbjct: 397 ---------------------KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWEL 435
Query: 129 DYALEMFSKMQLQGVRPSGFTFSILL---STVSSACHGKQIHGSMIRSGLSLSNVVLGNS 185
AL +F M+ + +RPS TF LL ++++S KQIHG M + GL+L ++ G++
Sbjct: 436 HEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL-DIFAGSA 494
Query: 186 LIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPD 245
LID+Y L + VF M+ D++ WNS+ +G E AL+ F ++ S PD
Sbjct: 495 LIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPD 554
Query: 246 EYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFE 305
E+T + ++ A L ++ G++ +K G N + +A +D+++KC ED+ + F+
Sbjct: 555 EFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD 614
Query: 306 QLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPP-VEH 364
D N +IS+Y +G G+ AL++ + M+ E I P T VLS+ VE
Sbjct: 615 SAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVED 674
Query: 365 GSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKL-DKRDLVSWNTIMMGLT 423
G + + ++ G + ++ + + G ++ + E+ K+ K + W +++ G
Sbjct: 675 GLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCA 734
Query: 424 QNG 426
+ G
Sbjct: 735 KAG 737
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 217/451 (48%), Gaps = 54/451 (11%)
Query: 24 RCLSFKSFD----FAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQK 79
R L ++ D + +HG + G TYL N ++LYSR G
Sbjct: 49 RLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAG--------------- 93
Query: 80 NCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM- 138
+ A KVF+++PE ++VSW++M+S G + +L +F +
Sbjct: 94 ----------------GMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 139 QLQGVRPSGFTFSILLSTVSSACHGK---------QIHGSMIRSGLSLSNVVLGNSLIDM 189
+ + P+ + +LS+ AC G Q+ +++SG +V +G LID
Sbjct: 138 RTRKDSPNEY----ILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFD-RDVYVGTLLIDF 192
Query: 190 YGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTI 249
Y K G + YA VF + E ++W ++ISGC G ++L FY + PD Y +
Sbjct: 193 YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYIL 252
Query: 250 SIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDR 309
S V++AC+ L L+ GKQ+ A ++ G ++ +++ ID + KC R+ + +LF +
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Query: 310 WDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQF 368
+ ++S Y + + A+ELF M + ++P + S +L+S + + G+Q
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 369 HSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNG-- 426
H+ IK+ +++ V +SL++MYAK + + ++F D+V +N ++ G ++ G
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ 432
Query: 427 -RAAETLDVFEELLEEGLPPDRITLAAVLLA 456
E L++F ++ + P +T ++L A
Sbjct: 433 WELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 161/298 (54%), Gaps = 9/298 (3%)
Query: 166 IHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSG 225
+HG +I GL L + L N LI++Y + G + YA VF M E +++SW++++S C + G
Sbjct: 66 VHGQIIVWGLEL-DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 226 YGELALDQFYSM-RYSGYSPDEYTISIVINACTKLRNLDKGK-QVFALS---VKVGFLSN 280
E +L F R SP+EY +S I AC+ L +G+ VF L VK GF +
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRD 182
Query: 281 SIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLR 340
V + ID + K ++ + +F+ L MIS + G V+L+LF ++
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 341 EDIRPTEFTLSCVLSSIPIPP-VEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDS 399
+++ P + LS VLS+ I P +E G Q H+ ++ G + +A + + L++ Y K G + +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 400 STEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLAC 457
+ ++F + ++++SW T++ G QN E +++F + + GL PD +++L +C
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 119/239 (49%), Gaps = 6/239 (2%)
Query: 288 IDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLR-EDIRPT 346
I+L+S+ + + ++FE++ + + M+S +G E +L +F R P
Sbjct: 86 INLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPN 145
Query: 347 EFTLSCVL---SSIPIPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEI 403
E+ LS + S + Q S +KSGFD + V + L++ Y K G+ID + +
Sbjct: 146 EYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLV 205
Query: 404 FVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFV 463
F L ++ V+W T++ G + GR+ +L +F +L+E+ + PD L+ VL AC+ F+
Sbjct: 206 FDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFL 265
Query: 464 DKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPGCSIWESIL 522
+ G + + + YG+ +ID + G++ A + + MP + S W ++L
Sbjct: 266 EGGKQIHAHIL-RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS-WTTLL 322
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 177/597 (29%), Positives = 289/597 (48%), Gaps = 73/597 (12%)
Query: 103 VFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILL---STVSS 159
V IP+P + S++S+I ++ +FS+M G+ P L + +S+
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 160 ACHGKQIH---------------GSM----IRSG-----------LSLSNVVLGNSLIDM 189
GKQIH GSM +R G +S +VV ++L+
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCA 191
Query: 190 YGKLGVLYYAFGVFLNME----ELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPD 245
Y + G L + ME E +I+SWN ++SG SGY + A+ F + + G+ PD
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 246 EYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFE 305
+ T+S V+ + L+ G+ + +K G L + V+SA ID++ K + + LF
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 306 QLDRWDYAVINVMISTYGRYGFGEVALELFQL---------------------------- 337
Q + + V N I+ R G + ALE+F+L
Sbjct: 312 QFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 338 ---MLRE----DIRPTEFTLSCVLSSI-PIPPVEHGSQFHSMAIKSGFDSNAVVASSLME 389
+ RE ++P T+ +L + I + HG H A++ N V S+L++
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID 431
Query: 390 MYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRIT 449
MYAK G I+ S +F + ++LV WN++M G + +G+A E + +FE L+ L PD I+
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 450 LAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTM 509
++L AC G D+G F M EEYG+ P EHY+C+++LL +AG+L +A D+ M
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Query: 510 PFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIV 569
PF+P +W ++L + + +V L E AE++ L+ +P Y LL+ YA +G W +
Sbjct: 552 PFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVD 611
Query: 570 RVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDEG 626
++ M G+ K GCSWI +KNR+YT AG+ H +I + ++ EM G
Sbjct: 612 SIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 173/379 (45%), Gaps = 43/379 (11%)
Query: 20 QLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQK 79
L C +F K IH G + ++ +Y R G D ++FD + K
Sbjct: 121 NLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK 180
Query: 80 NCISWNICLRGLLKSDNLDTALKVFDEIP----EPDVVSWNSMISGYASCGYSDYALEMF 135
+ ++ + L + L+ +++ E+ E ++VSWN ++SG+ GY A+ MF
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 136 SKMQLQGVRPSGFTFSILLSTVSSA---CHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGK 192
K+ G P T S +L +V + G+ IHG +I+ GL V+ +++IDMYGK
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI-SAMIDMYGK 299
Query: 193 LGVLYYAFGVFLNME-----------------------------------ELDIISWNSL 217
G +Y +F E EL+++SW S+
Sbjct: 300 SGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359
Query: 218 ISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGF 277
I+GC +G AL+ F M+ +G P+ TI ++ AC + L G+ +V+V
Sbjct: 360 IAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 278 LSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQL 337
L N V SA ID+++KC R+ S +F + + N +++ + +G + + +F+
Sbjct: 420 LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFES 479
Query: 338 MLREDIRPTEFTLSCVLSS 356
++R ++P + + +LS+
Sbjct: 480 LMRTRLKPDFISFTSLLSA 498
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 149/285 (52%), Gaps = 9/285 (3%)
Query: 31 FDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRG 90
+ + IHG++ K G + + +D+Y + G ++ LF++ N + G
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG 327
Query: 91 LLKSDNLDTALKVF----DEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPS 146
L ++ +D AL++F ++ E +VVSW S+I+G A G ALE+F +MQ+ GV+P+
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
Query: 147 GFTFSILL---STVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVF 203
T +L +++ HG+ HG +R L L NV +G++LIDMY K G + + VF
Sbjct: 388 HVTIPSMLPACGNIAALGHGRSTHGFAVRVHL-LDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 204 LNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLD 263
M +++ WNSL++G G + + F S+ + PD + + +++AC ++ D
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTD 506
Query: 264 KGKQVFA-LSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQL 307
+G + F +S + G S ++L + +L+++ L +++
Sbjct: 507 EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/471 (19%), Positives = 190/471 (40%), Gaps = 75/471 (15%)
Query: 165 QIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNS 224
Q H +++SG + ++ + LI Y A V ++ + I S++SLI +
Sbjct: 36 QAHARILKSG-AQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 225 GYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVL 284
++ F M G PD + + + C +L GKQ+ +S G ++ V
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 285 SATIDLFSKCNRLEDSVRLFEQLDRWDYAVI----------------------------- 315
+ ++ +C R+ D+ ++F+++ D
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 316 ------NVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPP-VEHGSQF 368
N ++S + R G+ + A+ +FQ + P + T+S VL S+ + G
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 369 HSMAIKSGFDSNAVVASSLMEMYAKTGS-------------------------------I 397
H IK G + V S++++MY K+G +
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 398 DSSTEIFVKLDKR----DLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAV 453
D + E+F ++ ++VSW +I+ G QNG+ E L++F E+ G+ P+ +T+ ++
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 454 LLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQP 513
L AC + G ++ + +ID+ + G++ + + + MP +
Sbjct: 395 LPACGNIAALGHGRST-HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK- 452
Query: 514 GCSIWESILRASAIYGDVKLTENVAERMMDLQL-PSPLPYSLLTQAYAMRG 563
W S++ +++G K ++ E +M +L P + ++ L A G
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/145 (19%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKN 80
++ C + + ++ HG ++ + ++G+ +D+Y++ G + +F+ +P KN
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIP----EPDVVSWNSMISGYASCGYSDYALEMFS 136
+ WN + G + +F+ + +PD +S+ S++S G +D + F
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 137 KMQLQ-GVRPSGFTFSILLSTVSSA 160
M + G++P +S +++ + A
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRA 538
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 282 bits (722), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 175/610 (28%), Positives = 305/610 (50%), Gaps = 41/610 (6%)
Query: 25 CLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISW 84
C + K +HG KL + L N +D+YS+ G CI+
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCG----------------CIT- 344
Query: 85 NICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVR 144
A +F +VVSWN+M+ G+++ G + ++ +M G
Sbjct: 345 --------------NAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED 390
Query: 145 PSGFTFSILLSTVSSACHG------KQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYY 198
+IL + V H K++H ++ + N ++ N+ + Y K G L Y
Sbjct: 391 VKADEVTIL-NAVPVCFHESFLPSLKELHCYSLKQEF-VYNELVANAFVASYAKCGSLSY 448
Query: 199 AFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTK 258
A VF + + SWN+LI G S L+LD M+ SG PD +T+ +++AC+K
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 259 LRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVM 318
L++L GK+V ++ + V + + L+ C L LF+ ++ N +
Sbjct: 509 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 568
Query: 319 ISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPI-PPVEHGSQFHSMAIKSGF 377
I+ Y + GF + AL +F+ M+ I+ ++ V + + P + G + H+ A+K
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 628
Query: 378 DSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEE 437
+ +A +A SL++MYAK GSI S+++F L ++ SWN ++MG +G A E + +FEE
Sbjct: 629 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEE 688
Query: 438 LLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAG 497
+ G PD +T VL ACN+ G + +G+ MK +G+ P +HYAC+ID+L +AG
Sbjct: 689 MQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAG 748
Query: 498 QLGKAIDITS-TMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLT 556
QL KA+ + + M + IW+S+L + I+ ++++ E VA ++ +L+ P Y LL+
Sbjct: 749 QLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLS 808
Query: 557 QAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLR 616
YA G+WE + +V++ M + + K GCSWI + ++++F GE G ++I +
Sbjct: 809 NLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWS 868
Query: 617 LLTWEMEDEG 626
+L ++ G
Sbjct: 869 ILEMKISKMG 878
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/533 (23%), Positives = 225/533 (42%), Gaps = 48/533 (9%)
Query: 21 LIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKN 80
+I C +HG + K G ++GN + Y G D LQLFD +
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM---- 248
Query: 81 CISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
PE ++VSWNSMI ++ G+S+ + + +M
Sbjct: 249 ---------------------------PERNLVSWNSMIRVFSDNGFSEESFLLLGEMME 281
Query: 141 QGVRPSGFTFSILLSTVSSACH-------GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKL 193
+ + L TV C GK +HG ++ L +VL N+L+DMY K
Sbjct: 282 ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD-KELVLNNALMDMYSKC 340
Query: 194 GVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSG--YSPDEYTISI 251
G + A +F +++SWN+++ G G D M G DE TI
Sbjct: 341 GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 252 VINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWD 311
+ C L K++ S+K F+ N +V +A + ++KC L + R+F +
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKT 460
Query: 312 YAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSI-PIPPVEHGSQFHS 370
N +I + + ++L+ M + P FT+ +LS+ + + G + H
Sbjct: 461 VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHG 520
Query: 371 MAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAE 430
I++ + + V S++ +Y G + + +F ++ + LVSWNT++ G QNG
Sbjct: 521 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDR 580
Query: 431 TLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFS-AMKEEYGVMPGEEHYAC- 488
L VF +++ G+ I++ V AC+ + G + A+K ++ + AC
Sbjct: 581 ALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH---LLEDDAFIACS 637
Query: 489 IIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERM 541
+ID+ + G + ++ + + + + S W +++ I+G K + E M
Sbjct: 638 LIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHGLAKEAIKLFEEM 689
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 198/423 (46%), Gaps = 53/423 (12%)
Query: 52 LGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPD 111
L R + +Y+ G+ DD +FD + KN WN + +++ D L+ F
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETF------- 174
Query: 112 VVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLST---VSSACHGKQIHG 168
+EM S L P FT+ ++ +S G +HG
Sbjct: 175 --------------------IEMISTTDLL---PDHFTYPCVIKACAGMSDVGIGLAVHG 211
Query: 169 SMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGE 228
++++GL + +V +GN+L+ YG G + A +F M E +++SWNS+I ++G+ E
Sbjct: 212 LVVKTGL-VEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 270
Query: 229 ---LALDQFYSMRYSG-YSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVL 284
L L + G + PD T+ V+ C + R + GK V +VK+ ++
Sbjct: 271 ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLN 330
Query: 285 SATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLR--ED 342
+A +D++SKC + ++ +F+ + + N M+ + G ++ + ML ED
Sbjct: 331 NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED 390
Query: 343 IRPTEFTLSCVLSSIPI-------PPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTG 395
++ E T +L+++P+ P ++ + H ++K F N +VA++ + YAK G
Sbjct: 391 VKADEVT---ILNAVPVCFHESFLPSLK---ELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 396 SIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLL 455
S+ + +F + + + SWN ++ G Q+ +LD ++ GL PD T+ ++L
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 456 ACN 458
AC+
Sbjct: 505 ACS 507
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 144/312 (46%), Gaps = 14/312 (4%)
Query: 163 GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCF 222
G++IH + S ++ VL +I MY G + VF + ++ WN++IS
Sbjct: 103 GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYS 162
Query: 223 NSGYGELALDQFYSM-RYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNS 281
+ + L+ F M + PD +T VI AC + ++ G V L VK G + +
Sbjct: 163 RNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDV 222
Query: 282 IVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLRE 341
V +A + + + D+++LF+ + + N MI + GF E + L M+ E
Sbjct: 223 FVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEE 282
Query: 342 D----IRPTEFTLSCVLSSIPIPPVEH----GSQFHSMAIKSGFDSNAVVASSLMEMYAK 393
+ P TL VL P+ E G H A+K D V+ ++LM+MY+K
Sbjct: 283 NGDGAFMPDVATLVTVL---PVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSK 339
Query: 394 TGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLE--EGLPPDRITLA 451
G I ++ IF + +++VSWNT++ G + G T DV ++L E + D +T+
Sbjct: 340 CGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 399
Query: 452 AVLLACNYGGFV 463
+ C + F+
Sbjct: 400 NAVPVCFHESFL 411
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 149/353 (42%), Gaps = 58/353 (16%)
Query: 14 SLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLF 73
S + CS L+ C KS K +HG + + ++ L LY G V LF
Sbjct: 496 SFTVCS-LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 554
Query: 74 DEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALE 133
D + K+ +SWN + G L++ G+ D AL
Sbjct: 555 DAMEDKSLVSWNTVITGYLQN-------------------------------GFPDRALG 583
Query: 134 MFSKMQLQGVRPSGFTFSILLSTVS---SACHGKQIHGSMIRSGLSLSNVVLGNSLIDMY 190
+F +M L G++ G + + S S G++ H ++ L + + SLIDMY
Sbjct: 584 VFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE-DDAFIACSLIDMY 642
Query: 191 GKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTIS 250
K G + + VF ++E SWN++I G G + A+ F M+ +G++PD+ T
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Query: 251 IVINACTK-------LRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRL 303
V+ AC LR LD+ K F L N + ID+ + +L+ ++R+
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLK------PNLKHYACVIDMLGRAGQLDKALRV 756
Query: 304 F--EQLDRWDYAVINVMIST---YGRYGFGE-VALELFQLMLREDIRPTEFTL 350
E + D + ++S+ + GE VA +LF+L E +P + L
Sbjct: 757 VAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFEL---EPEKPENYVL 806
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/538 (30%), Positives = 284/538 (52%), Gaps = 20/538 (3%)
Query: 100 ALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLSTVSS 159
A +VFDE+ D VS+N+MI GY + ++ MF + L +P T +S+V
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLT----VSSVLR 315
Query: 160 ACH-------GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDII 212
AC K I+ M+++G L + V N LID+Y K G + A VF +ME D +
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTV-RNILIDVYAKCGDMITARDVFNSMECKDTV 374
Query: 213 SWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALS 272
SWNS+ISG SG A+ F M D T ++I+ T+L +L GK + +
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 273 VKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVAL 332
+K G + V +A ID+++KC + DS+++F + D N +IS R+G L
Sbjct: 435 IKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGL 494
Query: 333 ELFQLMLREDIRPTEFTLSCVLSSIP----IPPVEHGSQFHSMAIKSGFDSNAVVASSLM 388
++ M + ++ P ++ L ++P + G + H ++ G++S + ++L+
Sbjct: 495 QVTTQMRKSEVVPD---MATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 551
Query: 389 EMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRI 448
EMY+K G +++S+ +F ++ +RD+V+W ++ G + L+ F ++ + G+ PD +
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611
Query: 449 TLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITST 508
A++ AC++ G VD+G+ F MK Y + P EHYAC++DLL ++ ++ KA +
Sbjct: 612 VFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQA 671
Query: 509 MPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAI 568
MP +P SIW S+LRA GD++ E V+ R+++L P L + AYA +W+ +
Sbjct: 672 MPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKV 731
Query: 569 VRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDEG 626
++K ++ I K G SWI + ++ F++G+ + IY L +L M EG
Sbjct: 732 SLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEG 789
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 222/457 (48%), Gaps = 38/457 (8%)
Query: 5 LKKAHVNKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFG 64
L+++ V+ ++ S +I C + ++ + +GF + ++GN +D+YSR G
Sbjct: 97 LRESKVSPDKYTFPS-VIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMG 155
Query: 65 TSDDVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYAS 124
L A +VFDE+P D+VSWNS+ISGY+S
Sbjct: 156 L-------------------------------LTRARQVFDEMPVRDLVSWNSLISGYSS 184
Query: 125 CGYSDYALEMFSKMQLQGVRPSGFTFSILLSTVSS---ACHGKQIHGSMIRSGLSLSNVV 181
GY + ALE++ +++ + P FT S +L + G+ +HG ++S S VV
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKS-GVNSVVV 243
Query: 182 LGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSG 241
+ N L+ MY K A VF M+ D +S+N++I G E ++ F
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQ 302
Query: 242 YSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSV 301
+ PD T+S V+ AC LR+L K ++ +K GF+ S V + ID+++KC + +
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 302 RLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLS-SIPIP 360
+F ++ D N +IS Y + G A++LF++M+ + + T ++S S +
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 361 PVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMM 420
++ G HS IKSG + V+++L++MYAK G + S +IF + D V+WNT++
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Query: 421 GLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLAC 457
+ G A L V ++ + + PD T L C
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 140/551 (25%), Positives = 255/551 (46%), Gaps = 55/551 (9%)
Query: 19 SQLIDRCLSFKS-FDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIP 77
S I R LS S + + IH + LG ++ + + +D YS F L +F +
Sbjct: 7 SPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 78 QKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSK 137
P +V WNS+I ++ G ALE + K
Sbjct: 67 ------------------------------PAKNVYLWNSIIRAFSKNGLFPEALEFYGK 96
Query: 138 MQLQGVRPSGFTFSILLSTVS---SACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLG 194
++ V P +TF ++ + A G ++ ++ G S++ +GN+L+DMY ++G
Sbjct: 97 LRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE-SDLFVGNALVDMYSRMG 155
Query: 195 VLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVIN 254
+L A VF M D++SWNSLISG + GY E AL+ ++ ++ S PD +T+S V+
Sbjct: 156 LLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLP 215
Query: 255 ACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAV 314
A L + +G+ + ++K G S +V + + ++ K R D+ R+F+++D D
Sbjct: 216 AFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVS 275
Query: 315 INVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSI-PIPPVEHGSQFHSMAI 373
N MI Y + E ++ +F L + +P T+S VL + + + ++ +
Sbjct: 276 YNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYML 334
Query: 374 KSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLD 433
K+GF + V + L+++YAK G + ++ ++F ++ +D VSWN+I+ G Q+G E +
Sbjct: 335 KAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMK 394
Query: 434 VFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACI---- 489
+F+ ++ D IT ++L D L F G+ G CI
Sbjct: 395 LFKMMMIMEEQADHITY--LMLISVSTRLAD---LKFGKGLHSNGIKSG----ICIDLSV 445
Query: 490 ----IDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQ 545
ID+ + G++G ++ I S+M + W +++ A +GD V +M +
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISACVRFGDFATGLQVTTQMRKSE 504
Query: 546 LPSPLPYSLLT 556
+ + L+T
Sbjct: 505 VVPDMATFLVT 515
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 195/441 (44%), Gaps = 40/441 (9%)
Query: 12 KASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQ 71
K L S ++ C + AK I+ ++ K GF + + N +D+Y++ G
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 72 LFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYA 131
+F+ + K+ +SWN + G ++S +L A+K+F
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF--------------------------- 396
Query: 132 LEMFSKMQLQGVRPSGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLID 188
+M M+ Q T+ +L+S + GK +H + I+SG+ + ++ + N+LID
Sbjct: 397 -KMMMIMEEQA---DHITYLMLISVSTRLADLKFGKGLHSNGIKSGICI-DLSVSNALID 451
Query: 189 MYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYT 248
MY K G + + +F +M D ++WN++IS C G L MR S PD T
Sbjct: 452 MYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMAT 511
Query: 249 ISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLD 308
+ + C L GK++ ++ G+ S + +A I+++SKC LE+S R+FE++
Sbjct: 512 FLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS 571
Query: 309 RWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPP-VEHG-S 366
R D MI YG YG GE ALE F M + I P ++ + V+ G +
Sbjct: 572 RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLA 631
Query: 367 QFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLD-KRDLVSWNTIMMGLTQN 425
F M D + ++++ +++ I + E + K D W +++ +
Sbjct: 632 CFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTS 691
Query: 426 GRAAETLDVFEELLEEGLPPD 446
G V ++E L PD
Sbjct: 692 GDMETAERVSRRIIE--LNPD 710
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 95/253 (37%), Gaps = 54/253 (21%)
Query: 25 CLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISW 84
C S + K IH L + G+ + +GN +++YS+ G
Sbjct: 519 CASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGC------------------- 559
Query: 85 NICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVR 144
L+ + +VF+ + DVV+W MI Y G + ALE F+ M+ G+
Sbjct: 560 ------------LENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 607
Query: 145 PSGFTFSILLSTVSSACHGKQIHGSMIRSGLS----LSNVVLGNSLIDMYGKLGVLYYAF 200
P F ++ S H ++ GL+ + + +I+ Y + L
Sbjct: 608 PDSVVFIAIIYACS--------HSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRS 659
Query: 201 GVFLNMEEL--------DIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIV 252
EE D W S++ C SG E A + S R +PD+ SI+
Sbjct: 660 QKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETA--ERVSRRIIELNPDDPGYSIL 717
Query: 253 I-NACTKLRNLDK 264
NA LR DK
Sbjct: 718 ASNAYAALRKWDK 730
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/540 (30%), Positives = 295/540 (54%), Gaps = 12/540 (2%)
Query: 96 NLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMF-SKMQLQGVRPSGFTFSILL 154
+++++ +VFD E ++ WN+MI Y ++E+F + + + T+ +
Sbjct: 266 DIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAA 325
Query: 155 STVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDI 211
S VS+ G+Q HG + ++ L +V+ NSL+ MY + G ++ +FGVFL+M E D+
Sbjct: 326 SAVSALQQVELGRQFHGFVSKNFRELP-IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDV 384
Query: 212 ISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFAL 271
+SWN++IS +G + L Y M+ G+ D T++ +++A + LRN + GKQ A
Sbjct: 385 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAF 444
Query: 272 SVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQ--LDRWDYAVINVMISTYGRYGFGE 329
++ G + S ID++SK + S +LFE D A N MIS Y + G E
Sbjct: 445 LIRQGIQFEGMN-SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTE 503
Query: 330 VALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLM 388
+F+ ML ++IRP T++ +L + I V+ G Q H +I+ D N VAS+L+
Sbjct: 504 KTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALV 563
Query: 389 EMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRI 448
+MY+K G+I + ++F + +R+ V++ T+++G Q+G + +F + E G+ PD I
Sbjct: 564 DMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAI 623
Query: 449 TLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITST 508
T AVL AC+Y G +D+G+ +F M+E Y + P EHY CI D+L + G++ +A +
Sbjct: 624 TFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKG 683
Query: 509 MPFQPGCS-IWESILRASAIYGDVKLTENVAERMMDLQLPSPLP--YSLLTQAYAMRGRW 565
+ + + +W S+L + ++G+++L E V+ER+ LL+ YA +W
Sbjct: 684 LGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKW 743
Query: 566 EAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDE 625
+++ +V++ MR+ G+ K G S I I + F + + +H +IY V+ L +M +
Sbjct: 744 KSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGD 803
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 190/386 (49%), Gaps = 16/386 (4%)
Query: 88 LRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQG--VRP 145
L + + N A ++FD IP+P V WN++I G+ AL +S+M+
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNC 105
Query: 146 SGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAF-- 200
+T+S L + + GK +H +IR L S+ V+ NSL++MY F
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRC-LQNSSRVVHNSLMNMYVSCLNAPDCFEY 164
Query: 201 ----GVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINAC 256
VF NM ++++WN+LIS +G A QF M P + V A
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 257 TKLRNLDKGKQVFALSVKVG--FLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAV 314
+ R++ K + L +K+G ++ + V+S+ I ++++ +E S R+F+ + V
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 315 INVMISTYGRYGFGEVALELF-QLMLREDIRPTEFTLSCVLSSI-PIPPVEHGSQFHSMA 372
N MI Y + ++ELF + + ++I E T S++ + VE G QFH
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 373 IKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETL 432
K+ + V+ +SLM MY++ GS+ S +F+ + +RD+VSWNT++ QNG E L
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 433 DVFEELLEEGLPPDRITLAAVLLACN 458
+ E+ ++G D IT+ A+L A +
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAAS 430
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 129/510 (25%), Positives = 233/510 (45%), Gaps = 61/510 (11%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S + C K+ K +H HL + N+ + N +++Y
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYV----------------- 153
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
+C++ C D KVFD + +VV+WN++IS Y G + A F M
Sbjct: 154 -SCLNAPDCFE-------YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIM 205
Query: 139 QLQGVRPSGFTFSILLSTVS---SACHGKQIHGSMIRSGLS-LSNVVLGNSLIDMYGKLG 194
V+PS +F + VS S +G M++ G + ++ + +S I MY +LG
Sbjct: 206 MRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELG 265
Query: 195 VLYYAFGVFLNMEELDIISWNSLI-----SGCFNSGYGELALDQFYSMRYSGYSPDEYTI 249
+ + VF + E +I WN++I + C EL L+ S DE T
Sbjct: 266 DIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESI-ELFLEAIGSKEIVS---DEVTY 321
Query: 250 SIVINACTKLRNLDKGKQVFALSVKVGFLSNS------IVLSATIDLFSKCNRLEDSVRL 303
+ +A + L+ ++ G+Q GF+S + +++++ + ++S+C + S +
Sbjct: 322 LLAASAVSALQQVELGRQFH------GFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGV 375
Query: 304 FEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP-IPPV 362
F + D N MIS + + G + L L M ++ + T++ +LS+ +
Sbjct: 376 FLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNK 435
Query: 363 EHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIF--VKLDKRDLVSWNTIMM 420
E G Q H+ I+ G + S L++MY+K+G I S ++F +RD +WN+++
Sbjct: 436 EIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMIS 494
Query: 421 GLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEY--- 477
G TQNG +T VF ++LE+ + P+ +T+A++L AC+ G VD G + +Y
Sbjct: 495 GYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQ 554
Query: 478 GVMPGEEHYACIIDLLCQAGQLGKAIDITS 507
V + ++D+ +AG + A D+ S
Sbjct: 555 NVFVA----SALVDMYSKAGAIKYAEDMFS 580
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 102/269 (37%), Gaps = 68/269 (25%)
Query: 1 MSSYLKKAHVNKASLSY--------------CSQLIDRCLSFKSFDFAKTIHGHLFKLGF 46
+S Y + H K L + + ++ C S D K +HG +
Sbjct: 493 ISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYL 552
Query: 47 NAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDE 106
+ + ++ + +D+YS+ G + A +F +
Sbjct: 553 DQNVFVASALVDMYSKAGA-------------------------------IKYAEDMFSQ 581
Query: 107 IPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLSTVSSACHGKQI 166
E + V++ +MI GY G + A+ +F MQ G++P TF +LS S
Sbjct: 582 TKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACS-------- 633
Query: 167 HGSMIRSGLSL-------SNVVLGNS----LIDMYGKLGVLYYAFGVFLNMEELDIIS-- 213
+ +I GL + N+ + + DM G++G + A+ + E I+
Sbjct: 634 YSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAEL 693
Query: 214 WNSLISGCFNSGYGELALDQFYSMRYSGY 242
W SL+ C +GEL L + S R + +
Sbjct: 694 WGSLLGSC--KLHGELELAETVSERLAKF 720
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 281 bits (718), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/540 (30%), Positives = 282/540 (52%), Gaps = 7/540 (1%)
Query: 93 KSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSI 152
K D+ ++A V P +VVSW S+ISG A G+ AL F +M+ +GV P+ FTF
Sbjct: 54 KLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPC 113
Query: 153 LLSTVSS---ACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEEL 209
V+S GKQIH ++ G L +V +G S DMY K + A +F + E
Sbjct: 114 AFKAVASLRLPVTGKQIHALAVKCGRIL-DVFVGCSAFDMYCKTRLRDDARKLFDEIPER 172
Query: 210 DIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVF 269
++ +WN+ IS G A++ F R P+ T +NAC+ +L+ G Q+
Sbjct: 173 NLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLH 232
Query: 270 ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGE 329
L ++ GF ++ V + ID + KC ++ S +F ++ + +++ Y + E
Sbjct: 233 GLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDE 292
Query: 330 VALELFQLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLM 388
A L+ ++ + ++F +S VLS+ + +E G H+ A+K+ + V S+L+
Sbjct: 293 KASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALV 352
Query: 389 EMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGL--PPD 446
+MY K G I+ S + F ++ +++LV+ N+++ G G+ L +FEE+ G P+
Sbjct: 353 DMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPN 412
Query: 447 RITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDIT 506
+T ++L AC+ G V+ GM +F +M+ YG+ PG EHY+CI+D+L +AG + +A +
Sbjct: 413 YMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFI 472
Query: 507 STMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWE 566
MP QP S+W ++ A ++G +L AE + L + LL+ +A GRW
Sbjct: 473 KKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWA 532
Query: 567 AIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDEG 626
V++ ++ GI K G SWI +KN+++ F A + H ++I L L EME G
Sbjct: 533 EANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAG 592
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 180/414 (43%), Gaps = 40/414 (9%)
Query: 35 KTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKS 94
K IH K G ++G D+Y + DD +LFDEIP++N
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERN-------------- 173
Query: 95 DNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILL 154
+ +WN+ IS + G A+E F + + P+ TF L
Sbjct: 174 -----------------LETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 216
Query: 155 STVSSACH---GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDI 211
+ S H G Q+HG ++RSG ++V + N LID YGK + + +F M +
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFD-TDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA 275
Query: 212 ISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFAL 271
+SW SL++ + E A + R ++ IS V++AC + L+ G+ + A
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 335
Query: 272 SVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVA 331
+VK V SA +D++ KC +EDS + F+++ + N +I Y G ++A
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 395
Query: 332 LELFQLMLREDIRPTE--FTLSCVLSSIP-IPPVEHGSQ-FHSMAIKSGFDSNAVVASSL 387
L LF+ M PT T +LS+ VE+G + F SM G + A S +
Sbjct: 396 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI 455
Query: 388 MEMYAKTGSIDSSTEIFVKLDKRDLVS-WNTIMMGLTQNGRAAETLDVFEELLE 440
++M + G ++ + E K+ + +S W + +G+ L E L +
Sbjct: 456 VDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 509
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 145/303 (47%), Gaps = 1/303 (0%)
Query: 156 TVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWN 215
+ SS G+ +H ++++ S L N LI+MY KL A V +++SW
Sbjct: 18 SASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWT 77
Query: 216 SLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKV 275
SLISG +G+ AL +F+ MR G P+++T A LR GKQ+ AL+VK
Sbjct: 78 SLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKC 137
Query: 276 GFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELF 335
G + + V + D++ K +D+ +LF+++ + N IS G A+E F
Sbjct: 138 GRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF 197
Query: 336 QLMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKT 394
R D P T L++ + G Q H + ++SGFD++ V + L++ Y K
Sbjct: 198 IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC 257
Query: 395 GSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVL 454
I SS IF ++ ++ VSW +++ QN + ++ ++ + +++VL
Sbjct: 258 KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVL 317
Query: 455 LAC 457
AC
Sbjct: 318 SAC 320
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 139/320 (43%), Gaps = 53/320 (16%)
Query: 14 SLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLF 73
S+++C+ ++ C + + +HG + + GF+ + N +D Y + +F
Sbjct: 209 SITFCA-FLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 267
Query: 74 DEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALE 133
E+ KN VSW S+++ Y + A
Sbjct: 268 TEMGTKN-------------------------------AVSWCSLVAAYVQNHEDEKASV 296
Query: 134 MFSKMQLQGVRPSGFTFSILLSTVSSACH-------GKQIHGSMIRSGLSLSNVVLGNSL 186
++ + + V S F ++S+V SAC G+ IH +++ + + + +G++L
Sbjct: 297 LYLRSRKDIVETSDF----MISSVLSACAGMAGLELGRSIHAHAVKACVERT-IFVGSAL 351
Query: 187 IDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSM--RYSGYSP 244
+DMYGK G + + F M E ++++ NSLI G + G ++AL F M R G +P
Sbjct: 352 VDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTP 411
Query: 245 DEYTISIVINACTKLRNLDKGKQVF-ALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRL 303
+ T +++AC++ ++ G ++F ++ G + S +D+ + +E +
Sbjct: 412 NYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEF 471
Query: 304 FEQLDRWDYAVINVMISTYG 323
+++ I IS +G
Sbjct: 472 IKKMP------IQPTISVWG 485
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S ++ C + ++IH H K ++G+ +D+Y + G +D Q FDE+P+
Sbjct: 314 SSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE 373
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEI------PEPDVVSWNSMISGYASCGYSDYAL 132
KN ++ N + G +D AL +F+E+ P P+ +++ S++S + G + +
Sbjct: 374 KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGM 433
Query: 133 EMFSKMQ-LQGVRPSGFTFSILLSTVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYG 191
++F M+ G+ P +S ++DM G
Sbjct: 434 KIFDSMRSTYGIEPGAEHYSC---------------------------------IVDMLG 460
Query: 192 KLGVLYYAFGVFLNMEELDIIS-WNSLISGCFNSGYGELAL 231
+ G++ A+ M IS W +L + C G +L L
Sbjct: 461 RAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 280 bits (715), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/565 (29%), Positives = 289/565 (51%), Gaps = 67/565 (11%)
Query: 32 DFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGL 91
+ K IH +LGF +L N L++Y+
Sbjct: 266 ELGKQIHCLALRLGFGGDLHLNNSLLEIYA------------------------------ 295
Query: 92 LKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFS 151
K+ +++ A +F E+PE +VVSWN MI G+ SD ++E ++M+ G +P+ T
Sbjct: 296 -KNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCI 354
Query: 152 ILLSTVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDI 211
+L G+ RSG +V G +F ++ + +
Sbjct: 355 SVL-------------GACFRSG----DVETGRR----------------IFSSIPQPSV 381
Query: 212 ISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFAL 271
+WN+++SG N + E A+ F M++ PD+ T+S+++++C +LR L+ GKQ+ +
Sbjct: 382 SAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGV 441
Query: 272 SVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQ-LDRWDYAVINVMISTYGRYGFGEV 330
++ NS ++S I ++S+C ++E S +F+ ++ D A N MIS +
Sbjct: 442 VIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTK 501
Query: 331 ALELFQLMLREDIR-PTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLM 388
AL LF+ M + + P E + + VLSS + + HG QFH + +KSG+ S++ V ++L
Sbjct: 502 ALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALT 561
Query: 389 EMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRI 448
+MY K G IDS+ + F + +++ V WN ++ G NGR E + ++ +++ G PD I
Sbjct: 562 DMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGI 621
Query: 449 TLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITST 508
T +VL AC++ G V+ G+ + S+M+ +G+ P +HY CI+D L +AG+L A +
Sbjct: 622 TFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEA 681
Query: 509 MPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAI 568
P++ +WE +L + ++GDV L VAE++M L S Y LL+ Y+ +W+
Sbjct: 682 TPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDS 741
Query: 569 VRVKKVMRKNGINKVTGCSWIGIKN 593
++ +M KN ++K G SW N
Sbjct: 742 AALQGLMNKNRVHKTPGQSWTTYGN 766
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 212/446 (47%), Gaps = 48/446 (10%)
Query: 34 AKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLK 93
K IHG + ++G + TYL NR LDLY G D ++FDE+ ++ SWN L K
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 94 SDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSIL 153
+L A +VFD +PE DVVSWN+MIS G+ + AL ++ +M G PS FT + +
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 154 LSTVSS---ACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLG-VLYYAFGVFLNMEEL 209
LS S G + HG +++GL N+ +GN+L+ MY K G ++ Y VF ++ +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLD-KNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 210 DIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVIN------ACTKLRNL- 262
+ +S+ ++I G A+ F M G D +S +++ C L +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 263 --DKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMIS 320
+ GKQ+ L++++GF + + ++ +++++K + + +F ++ + N+MI
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 321 TYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPIPPVEHGSQFHSMAIKSGFDSN 380
+G+ + ++E M +P E T VL G+ F
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVL----------GACF------------ 361
Query: 381 AVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLE 440
++G +++ IF + + + +WN ++ G + E + F ++
Sbjct: 362 ------------RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF 409
Query: 441 EGLPPDRITLAAVLLACNYGGFVDKG 466
+ L PD+ TL+ +L +C F++ G
Sbjct: 410 QNLKPDKTTLSVILSSCARLRFLEGG 435
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 178/355 (50%), Gaps = 43/355 (12%)
Query: 163 GKQIHGSMIRSGLSLSNVVLGNSLIDMY-------------------------------G 191
GK IHG ++R G+ S+ L N L+D+Y
Sbjct: 25 GKVIHGFIVRMGMK-SDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 192 KLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISI 251
K+G L A VF M E D++SWN++IS G+ E AL + M G+ P +T++
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 252 VINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLED-SVRLFEQLDRW 310
V++AC+K+ + G + ++VK G N V +A + +++KC + D VR+FE L +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 311 DYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLS-SIP---------IP 360
+ +I R A+++F+LM + ++ LS +LS S P I
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 361 PVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMM 420
E G Q H +A++ GF + + +SL+E+YAK ++ + IF ++ + ++VSWN +++
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 421 GLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKE 475
G Q R+ ++++ + + G P+ +T +VL AC G V+ G +FS++ +
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ 378
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 152/331 (45%), Gaps = 39/331 (11%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S ++ C + + K IHG + + + ++++ + + +YS
Sbjct: 420 SVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYS----------------- 462
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDE-IPEPDVVSWNSMISGYASCGYSDYALEMFSK 137
+ + ++ + +FD+ I E D+ WNSMISG+ AL +F +
Sbjct: 463 --------------ECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRR 508
Query: 138 MQLQGVR-PSGFTFSILLSTVSSAC---HGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKL 193
M V P+ +F+ +LS+ S C HG+Q HG +++SG +S+ + +L DMY K
Sbjct: 509 MHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGY-VSDSFVETALTDMYCKC 567
Query: 194 GVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVI 253
G + A F + + + WN +I G ++G G+ A+ + M SG PD T V+
Sbjct: 568 GEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVL 627
Query: 254 NACTKLRNLDKGKQVFALSVKVGFLSNSI-VLSATIDLFSKCNRLEDSVRLFEQLDRWDY 312
AC+ ++ G ++ + ++ + + +D + RLED+ +L E
Sbjct: 628 TACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSS 687
Query: 313 AVI-NVMISTYGRYGFGEVALELFQLMLRED 342
+V+ +++S+ +G +A + + ++R D
Sbjct: 688 SVLWEILLSSCRVHGDVSLARRVAEKLMRLD 718
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 15 LSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFD 74
LS CS+L S + HG + K G+ + +++ D+Y + G D Q FD
Sbjct: 526 LSSCSRLC-------SLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFD 578
Query: 75 EIPQKNCISWNICLRGLLKSDNLDTALKVFDEI----PEPDVVSWNSMISGYASCGYSDY 130
+ +KN + WN + G + D A+ ++ ++ +PD +++ S+++ + G +
Sbjct: 579 AVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVET 638
Query: 131 ALEMFSKMQ-LQGVRP 145
LE+ S MQ + G+ P
Sbjct: 639 GLEILSSMQRIHGIEP 654
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 279 bits (713), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 180/620 (29%), Positives = 307/620 (49%), Gaps = 46/620 (7%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
+ L+ C + + H + K + ++GN +D+Y++ G +D Q+F+ +
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM-- 489
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKM 138
C R D V+WN++I Y A ++F +M
Sbjct: 490 --------CDR---------------------DNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 139 QLQGVRPSGFTFSILLSTVSSACH------GKQIHGSMIRSGLSLSNVVLGNSLIDMYGK 192
L G+ G + L ST+ + H GKQ+H ++ GL ++ G+SLIDMY K
Sbjct: 521 NLCGIVSDG---ACLASTLKACTHVHGLYQGKQVHCLSVKCGLD-RDLHTGSSLIDMYSK 576
Query: 193 LGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIV 252
G++ A VF ++ E ++S N+LI+G ++ E A+ F M G +P E T + +
Sbjct: 577 CGIIKDARKVFSSLPEWSVVSMNALIAG-YSQNNLEEAVVLFQEMLTRGVNPSEITFATI 635
Query: 253 INACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATI-DLFSKCNRLEDSVRLFEQLDRWD 311
+ AC K +L G Q K GF S L ++ ++ + ++ LF +L
Sbjct: 636 VEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPK 695
Query: 312 YAVI-NVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIPI-PPVEHGSQFH 369
V+ M+S + + GF E AL+ ++ M + + P + T VL + + G H
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIH 755
Query: 370 SMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKR-DLVSWNTIMMGLTQNGRA 428
S+ D + + +++L++MYAK G + S+++F ++ +R ++VSWN+++ G +NG A
Sbjct: 756 SLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYA 815
Query: 429 AETLDVFEELLEEGLPPDRITLAAVLLACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYAC 488
+ L +F+ + + + PD IT VL AC++ G V G +F M +YG+ +H AC
Sbjct: 816 EDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVAC 875
Query: 489 IIDLLCQAGQLGKAIDITSTMPFQPGCSIWESILRASAIYGDVKLTENVAERMMDLQLPS 548
++DLL + G L +A D +P +W S+L A I+GD E AE++++L+ +
Sbjct: 876 MVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQN 935
Query: 549 PLPYSLLTQAYAMRGRWEAIVRVKKVMRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGG 608
Y LL+ YA +G WE ++KVMR G+ KV G SWI ++ R + F AG+ H
Sbjct: 936 SSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEI 995
Query: 609 QKIYLVLRLLTWEMEDEGCV 628
KI + L L M+D+ V
Sbjct: 996 GKIEMFLEDLYDLMKDDAVV 1015
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 235/479 (49%), Gaps = 41/479 (8%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S ++ C + +F + IH + K+G ++Y G +D+Y++ D ++F+ I
Sbjct: 164 SIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVD 223
Query: 79 KNCISWNICLRGLLKSDNLDTALKVFD--------------------------------- 105
N + W G +K+ + A+ VF+
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLL 283
Query: 106 --EIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLSTVSSACH- 162
E+ PDVV+WN MISG+ G A+E F M+ V+ + T +LS + +
Sbjct: 284 FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANL 343
Query: 163 --GKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISG 220
G +H I+ GL+ SN+ +G+SL+ MY K + A VF +EE + + WN++I G
Sbjct: 344 DLGLVVHAEAIKLGLA-SNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 221 CFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSN 280
++G ++ F M+ SGY+ D++T + +++ C +L+ G Q ++ +K N
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 281 SIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLR 340
V +A +D+++KC LED+ ++FE++ D N +I +Y + A +LF+ M
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522
Query: 341 EDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDS 399
I L+ L + + + G Q H +++K G D + SSL++MY+K G I
Sbjct: 523 CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582
Query: 400 STEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACN 458
+ ++F L + +VS N ++ G +QN E + +F+E+L G+ P IT A ++ AC+
Sbjct: 583 ARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACH 640
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 212/460 (46%), Gaps = 68/460 (14%)
Query: 24 RCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCIS 83
R LS+ S D + I+GH+ H L CL F + ++FDE+PQ+ ++
Sbjct: 21 RRLSY-SPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSR----KVFDEMPQRLALA 75
Query: 84 WNI--------CLRGLLKSDNLDTAL--------------KVFDEIPEPDVVSWNSMISG 121
I + G+ L A+ K FD + E DV +WNSM+S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 122 YASCGYSDYALEMFSKMQLQGVRPSGFTFSILLSTVSSACH---GKQIHGSMIRSGLSLS 178
Y+S G L F + + P+ FTFSI+LST + + G+QIH SMI+ GL
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE-R 193
Query: 179 NVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSLISGCFNSGYGELALDQFYSMR 238
N G +L+DMY K + A VF + + + + W L SG +G E A+ F MR
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 239 YSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKVGFLSNSIVLSATIDLFSKCNRLE 298
G+ PD VIN +L +L+
Sbjct: 254 DEGHRPDHLAFVTVINTYIRL-----------------------------------GKLK 278
Query: 299 DSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQLMLREDIRPTEFTLSCVLSSIP 358
D+ LF ++ D NVMIS +G+ G VA+E F M + ++ T TL VLS+I
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338
Query: 359 I-PPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSSTEIFVKLDKRDLVSWNT 417
I ++ G H+ AIK G SN V SSL+ MY+K ++++ ++F L++++ V WN
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNA 398
Query: 418 IMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLAC 457
++ G NG + + +++F ++ G D T ++L C
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTC 438
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 140/303 (46%), Gaps = 40/303 (13%)
Query: 10 VNKASLSYCSQLIDRCLSFKSFDFAKTIHGHLFKLGFNAH-TYLGNRCLDLYSRFGTSDD 68
VN + +++ + +++ C +S HG + K GF++ YLG L +Y
Sbjct: 625 VNPSEITFAT-IVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY-------- 675
Query: 69 VLQLFDEIPQKNCISWNICLRGLLKSDNLDTALKVFDEIPEP-DVVSWNSMISGYASCGY 127
+ S + A +F E+ P +V W M+SG++ G+
Sbjct: 676 -----------------------MNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGF 712
Query: 128 SDYALEMFSKMQLQGVRPSGFTFSILL---STVSSACHGKQIHGSMIRSGLSLSNVVLGN 184
+ AL+ + +M+ GV P TF +L S +SS G+ IH + L + N
Sbjct: 713 YEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT-SN 771
Query: 185 SLIDMYGKLGVLYYAFGVFLNMEEL-DIISWNSLISGCFNSGYGELALDQFYSMRYSGYS 243
+LIDMY K G + + VF M +++SWNSLI+G +GY E AL F SMR S
Sbjct: 772 TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIM 831
Query: 244 PDEYTISIVINACTKLRNLDKGKQVFALSV-KVGFLSNSIVLSATIDLFSKCNRLEDSVR 302
PDE T V+ AC+ + G+++F + + + G + ++ +DL + L+++
Sbjct: 832 PDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADD 891
Query: 303 LFE 305
E
Sbjct: 892 FIE 894
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 287/534 (53%), Gaps = 7/534 (1%)
Query: 100 ALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLSTVSS 159
A VFD + E D++SWNS+I+G A G A+ +F ++ G++P +T + +L SS
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
Query: 160 ACHG----KQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWN 215
G KQ+H I+ ++S+ + +LID Y + + A + D+++WN
Sbjct: 429 LPEGLSLSKQVHVHAIKIN-NVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWN 486
Query: 216 SLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQVFALSVKV 275
++++G S G L F M G D++T++ V C L +++GKQV A ++K
Sbjct: 487 AMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS 546
Query: 276 GFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELF 335
G+ + V S +D++ KC + + F+ + D MIS G E A +F
Sbjct: 547 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVF 606
Query: 336 QLMLREDIRPTEFTLSCVL-SSIPIPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKT 394
M + P EFT++ + +S + +E G Q H+ A+K ++ V +SL++MYAK
Sbjct: 607 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKC 666
Query: 395 GSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVL 454
GSID + +F +++ ++ +WN +++GL Q+G ETL +F+++ G+ PD++T VL
Sbjct: 667 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 726
Query: 455 LACNYGGFVDKGMLVFSAMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPG 514
AC++ G V + +M +YG+ P EHY+C+ D L +AG + +A ++ +M +
Sbjct: 727 SACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEAS 786
Query: 515 CSIWESILRASAIYGDVKLTENVAERMMDLQLPSPLPYSLLTQAYAMRGRWEAIVRVKKV 574
S++ ++L A + GD + + VA ++++L+ Y LL+ YA +W+ + + +
Sbjct: 787 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTM 846
Query: 575 MRKNGINKVTGCSWIGIKNRIYTFNAGELQHHGGQKIYLVLRLLTWEMEDEGCV 628
M+ + + K G SWI +KN+I+ F + + + IY ++ + +++ EG V
Sbjct: 847 MKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYV 900
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 152/570 (26%), Positives = 274/570 (48%), Gaps = 49/570 (8%)
Query: 19 SQLIDRCLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQ 78
S ++ CL +++ HG+ K+G + ++ +++Y +FG + LF+E+P
Sbjct: 149 SPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY 208
Query: 79 KNCISWNICLRGLL----KSDNLDTA--------------LKVFDEIPEPD--------- 111
++ + WN+ L+ L K + +D + L++ I D
Sbjct: 209 RDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSF 268
Query: 112 -----------VVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILLST---V 157
++ N +S Y G L+ F+ M V TF ++L+T V
Sbjct: 269 ANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKV 328
Query: 158 SSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDIISWNSL 217
S G+Q+H ++ GL L + + NSLI+MY KL +A VF NM E D+ISWNS+
Sbjct: 329 DSLALGQQVHCMALKLGLDLM-LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSV 387
Query: 218 ISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKL-RNLDKGKQVFALSVKVG 276
I+G +G A+ F + G PD+YT++ V+ A + L L KQV ++K+
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN 447
Query: 277 FLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEVALELFQ 336
+S+S V +A ID +S+ ++++ LFE+ + +D N M++ Y + G L+LF
Sbjct: 448 NVSDSFVSTALIDAYSRNRCMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLFA 506
Query: 337 LMLREDIRPTEFTLSCVLSSIP-IPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTG 395
LM ++ R +FTL+ V + + + G Q H+ AIKSG+D + V+S +++MY K G
Sbjct: 507 LMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCG 566
Query: 396 SIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLL 455
+ ++ F + D V+W T++ G +NG VF ++ G+ PD T+A +
Sbjct: 567 DMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAK 626
Query: 456 ACNYGGFVDKGMLVFS-AMKEEYGVMPGEEHYACIIDLLCQAGQLGKAIDITSTMPFQPG 514
A + +++G + + A+K P ++D+ + G + A + +
Sbjct: 627 ASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-N 683
Query: 515 CSIWESILRASAIYGDVKLTENVAERMMDL 544
+ W ++L A +G+ K T + ++M L
Sbjct: 684 ITAWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 184/432 (42%), Gaps = 67/432 (15%)
Query: 33 FAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLL 92
K H + N +L N + +YS+ G+ ++FD++P ++ +SWN L
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 93 KS-----DNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSG 147
+S +N+ A +F I DVV Y M L+ SG
Sbjct: 117 QSSECVVENIQQAFLLF-RILRQDVV----------------YTSRMTLSPMLKLCLHSG 159
Query: 148 FTFSILLSTVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNME 207
+ ++ + HG + GL V G +L+++Y K G + +F M
Sbjct: 160 YVWA-----------SESFHGYACKIGLDGDEFVAG-ALVNIYLKFGKVKEGKVLFEEMP 207
Query: 208 ELDIISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACTKLRNLDKGKQ 267
D++ WN ++ G+ E A+D + SG +P+E T+ ++
Sbjct: 208 YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLAR------------- 254
Query: 268 VFALSVKVGFLSNSIVLSATIDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGF 327
+S + + F+ N D+ + E + R N +S Y G
Sbjct: 255 ----------ISGDDSDAGQVKSFANGN---DASSVSEIIFR------NKGLSEYLHSGQ 295
Query: 328 GEVALELFQLMLREDIRPTEFTLSCVL-SSIPIPPVEHGSQFHSMAIKSGFDSNAVVASS 386
L+ F M+ D+ + T +L +++ + + G Q H MA+K G D V++S
Sbjct: 296 YSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNS 355
Query: 387 LMEMYAKTGSIDSSTEIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPD 446
L+ MY K + +F + +RDL+SWN+++ G+ QNG E + +F +LL GL PD
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 447 RITLAAVLLACN 458
+ T+ +VL A +
Sbjct: 416 QYTMTSVLKAAS 427
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 35/226 (15%)
Query: 35 KTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISWNICLRGLLKS 94
K +H + K G++ ++ + LD+Y + G FD IP + ++W
Sbjct: 537 KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW---------- 586
Query: 95 DNLDTALKVFDEIPEPDVVSWNSMISGYASCGYSDYALEMFSKMQLQGVRPSGFTFSILL 154
+MISG G + A +FS+M+L GV P FT + L
Sbjct: 587 ---------------------TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLA 625
Query: 155 ---STVSSACHGKQIHGSMIRSGLSLSNVVLGNSLIDMYGKLGVLYYAFGVFLNMEELDI 211
S +++ G+QIH + ++ + ++ +G SL+DMY K G + A+ +F +E ++I
Sbjct: 626 KASSCLTALEQGRQIHANALKLNCT-NDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNI 684
Query: 212 ISWNSLISGCFNSGYGELALDQFYSMRYSGYSPDEYTISIVINACT 257
+WN+++ G G G+ L F M+ G PD+ T V++AC+
Sbjct: 685 TAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 288 IDLFSKCNRLEDSVRLFEQLDRWDYAVINVMISTYGRYGFGEV-----ALELFQLMLRED 342
I ++SKC L + R+F+++ D N +++ Y + V A LF+++ ++
Sbjct: 81 ISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDV 140
Query: 343 IRPTEFTLSCVLS-SIPIPPVEHGSQFHSMAIKSGFDSNAVVASSLMEMYAKTGSIDSST 401
+ + TLS +L + V FH A K G D + VA +L+ +Y K G +
Sbjct: 141 VYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGK 200
Query: 402 EIFVKLDKRDLVSWNTIMMGLTQNGRAAETLDVFEELLEEGLPPDRITLAAVLLACNYGG 461
+F ++ RD+V WN ++ + G E +D+ GL P+ ITL LLA G
Sbjct: 201 VLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLR--LLARISGD 258
Query: 462 FVDKGML 468
D G +
Sbjct: 259 DSDAGQV 265
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 25 CLSFKSFDFAKTIHGHLFKLGFNAHTYLGNRCLDLYSRFGTSDDVLQLFDEIPQKNCISW 84
CL+ + + + IH + KL ++G +D+Y++ G+ DD LF I N +W
Sbjct: 630 CLT--ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 687
Query: 85 NICLRGLLKSDNLDTALKVFDEIP----EPDVVSWNSMISGYASCGYSDYALEMFSKMQL 140
N L GL + L++F ++ +PD V++ ++S +C +S E + M+
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS---ACSHSGLVSEAYKHMRS 744
Query: 141 Q----GVRPSGFTFSILLSTVSSACHGKQ 165
G++P +S L + A KQ
Sbjct: 745 MHGDYGIKPEIEHYSCLADALGRAGLVKQ 773
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 234,089,510
Number of Sequences: 539616
Number of extensions: 9681032
Number of successful extensions: 29922
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 20907
Number of HSP's gapped (non-prelim): 2438
length of query: 640
length of database: 191,569,459
effective HSP length: 124
effective length of query: 516
effective length of database: 124,657,075
effective search space: 64323050700
effective search space used: 64323050700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)